Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	1	3208470	187356334	92014	0.0041
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	1	187356792	187356794	2	-1.6712
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	1	187356829	245880329	36961	8e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	2	474222	242124735	131220	0.0038
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	3	526235	199023074	106311	0.0038
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	4	1043934	189836143	102666	-0.0014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	5	967233	89905379	47953	0.003
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	5	89912110	89917534	5	-1.1734
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	5	89917824	119038846	15585	-5e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	5	119039424	119047875	10	-0.9614
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	5	119081752	180293075	36887	0.0048
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	6	959281	49266019	28946	0.0037
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	6	49267609	49271394	3	-1.6261
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	6	49274737	96601035	23499	0.0024
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	6	96601579	96603273	2	-1.6086
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	6	96603416	125438108	16536	0.0039
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	6	125438609	125438744	6	-0.9361
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	6	125439259	150684489	15676	0.0024
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	6	150686077	150688706	3	-0.992
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	6	150693517	157876118	4850	-0.0022
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	6	157876267	157876496	4	-1.0311
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	6	157880691	169575430	6458	0.0031
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	6	169575432	169575433	2	1.406
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	6	169578607	169718440	101	0.0067
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	6	169720416	169721000	3	-3.1897
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	6	169721044	170745844	332	0.0189
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	7	671810	135139161	69478	-0.0023
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	7	135155840	135158802	6	-1.111
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	7	135160781	158077879	11783	0.0012
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	8	607667	145304484	81472	3e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	9	779932	27610642	16967	0.004
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	9	27617023	27701270	75	-1.0018
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	9	27708517	102553347	27870	1e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	9	102554081	102554226	2	-1.4964
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	9	102556305	122624498	13860	1e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	9	122625267	122631137	2	-1.594
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	9	122632782	140058573	9170	0.005
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	10	405240	13170148	8958	0.0019
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	10	13170540	13173631	2	-1.5703
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	10	13176081	135075077	71830	6e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	11	446120	117558366	66149	0.0032
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	11	117561932	117562454	2	-1.579
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	11	117564194	133647740	11037	0.0016
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	12	760163	131671419	73898	-4e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	13	18348806	47093069	18198	8e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	13	47093128	47093681	3	-1.7384
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	13	47093766	98714293	28611	-0.0042
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	13	98714437	98718388	2	-1.5364
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	13	98720692	114005560	9805	0.0019
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	14	19571208	28793480	4458	0.003
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	14	28797605	28801413	3	-1.3212
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	14	28803060	105059083	44940	-0.0019
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	15	21238778	99701830	44512	0.0022
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	16	593460	2930817	600	-0.005
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	16	2931355	2931471	2	-3.427
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	16	2932115	87907437	40233	0.0012
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	17	933971	78510305	36944	0.0016
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	18	319586	75210228	42636	0.0017
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	19	235018	63570038	23925	0.0029
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	20	403764	61690281	37234	0.0025
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	21	14269492	31354033	10815	-2e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	21	31354121	31356009	4	-1.423
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	21	31356710	46503202	9747	-2e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	22	15803930	47717016	16905	0.0021
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	X	3167107	31222042	12494	-0.0013
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	X	31222209	31222803	2	-3.5575
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	X	31224486	152352913	50152	0.0021
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	X	152357280	152358511	2	-2.2131
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H02_1438948	X	152358632	154558783	384	0.0315
