Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	1	3208470	210897584	106629	-0.0384
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	1	210908953	211484536	319	-0.5387
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	1	211484681	245880329	22058	-0.0319
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	2	474222	116946240	61071	0.0801
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	2	116946687	181859425	36247	-0.4771
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	2	181860022	183703781	1094	0.1117
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	2	183710814	183763662	35	-0.4673
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	2	183768228	183915317	70	0.075
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	2	183916964	185053706	499	-0.4739
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	2	185057750	242124735	32211	0.0859
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	3	526235	57981453	32290	0.0443
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	3	57984299	57990744	5	-0.6951
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	3	57993919	81595241	14400	0.058
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	3	81597742	84250850	1247	-0.4704
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	3	84255487	84616590	182	0.1154
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	3	84661562	84901560	141	-0.479
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	3	84962721	199023074	58064	0.0773
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	4	1043934	5985799	2473	0.0186
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	4	5986307	5986933	2	-1.152
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	4	5990447	112462788	59091	0.0587
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	4	112464239	121345297	5081	-0.3133
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	4	121346082	189836143	36045	0.0669
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	967233	25113001	14591	0.0535
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	25421217	27294457	1100	-0.4808
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	27295189	27407704	62	0.0697
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	27413954	27463547	28	-0.4662
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	27463830	86976353	30706	0.0589
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	86979034	88813548	940	-0.4894
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	88818838	96513963	4067	0.0676
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	96523079	96559225	28	-0.5182
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	96559371	97760925	548	0.0664
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	97762775	97817894	28	-0.483
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	97820594	97972846	101	0.0891
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	97982691	98013553	26	-0.8733
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	98014451	98136929	62	0.0399
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	98139212	98221694	32	-0.5208
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	98222788	98230425	11	0.0317
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	98233197	98284037	29	-0.4474
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	98286833	98294241	4	-1.4562
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	98298164	99732320	185	-0.5114
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	99735770	100651931	370	0.0732
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	100659230	102032937	561	-0.5184
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	102042805	102042982	3	-1.7023
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	102043933	103699805	862	-0.5058
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	103703047	105843749	1049	0.082
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	105844976	105861329	13	-0.29
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	105862979	121120441	9168	0.0671
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	121124293	121136721	16	-0.427
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	121137238	180293075	35876	0.0498
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	959281	64845289	35061	0.0791
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	64876890	87973494	12866	-0.4749
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	87973517	87973534	2	-1.9787
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	87976968	88117758	88	-0.4918
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	88118294	88118372	2	-2.0802
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	88118556	102671782	8034	-0.4876
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	102716042	105050443	1202	0.0656
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	105050478	105783350	423	-0.4949
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	105805221	106309152	327	0.0745
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	106311749	106325101	14	-0.4985
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	106325676	106386540	50	0.0713
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	106388905	106391142	6	-0.423
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	106395999	106443056	42	0.1604
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	106444914	170745844	38296	-0.4898
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	7	671810	13986650	6314	0.3411
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	7	13986816	13986865	2	-0.6954
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	7	13987388	158077879	74966	0.3686
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	8	607667	8658847	3396	-0.3182
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	8	8661047	12620232	1676	-0.5353
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	8	12622163	41688081	18876	-0.3091
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	8	41694596	41746111	45	0.1916
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	8	41747807	42809871	648	-0.3021
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	8	42820471	91159997	24571	0.2884
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	8	91170515	91242157	42	-0.3347
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	8	91245050	145304484	32229	0.2775
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	9	779932	70565866	23608	0.0065
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	9	70566816	70567786	3	-1.3018
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	9	70568423	81956855	7928	0.0128
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	9	81960761	81992064	24	-0.6246
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	9	81992607	82126354	81	-8e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	9	82126496	82153431	17	-0.4529
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	9	82153943	102904048	13508	0.0318
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	9	102912502	102953632	51	-0.5029
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	9	102957565	140058573	22738	0.0418
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	10	405240	135075077	80825	0.0584
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	446120	26570244	16814	0.0684
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	26570324	38163764	7047	-0.4898
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	38164297	39020934	491	0.0955
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	39027062	39030481	3	-0.6684
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	39033747	39185697	73	0.1197
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	39188220	39188490	3	-0.8044
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	39192914	39216547	14	0.2301
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	39218561	39220757	4	-0.6042
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	39221117	39439099	125	0.1082
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	39439763	41592349	1499	-0.479
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	41597174	43346950	1157	0.0798
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	43349060	43350275	3	-0.7536
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	43354839	43380520	16	0.0569
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	43385497	50011906	3252	-0.5032
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	55770374	115894245	34488	0.0739
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	115896747	115897703	4	-0.6501
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	115898197	133647740	12212	0.0659
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	12	760163	9682491	4721	0.0612
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	12	9685932	14455924	2941	-0.4846
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	12	14465163	39808407	13238	0.0922
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	12	39810022	39889246	50	-0.4688
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	12	39889380	49939088	5251	0.084
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	12	49942918	50961600	589	-0.1491
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	12	50962184	131671419	47123	0.0804
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	13	18348806	37964688	12284	0.0646
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	13	37967381	114005560	44333	-0.5071
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	14	19571208	46351550	13534	0.0734
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	14	46367838	46976302	352	-0.6394
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	14	46979249	105059083	35524	0.0646
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	15	21238778	57507085	19509	0.0217
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	15	57510545	57510557	2	-1.5343
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	15	57513902	84944427	15854	0.0097
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	15	84946745	84947122	8	-0.6473
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	15	84947152	99701830	9145	0.0225
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	16	593460	51184386	17656	-0.0667
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	16	51187203	51205838	17	-0.7502
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	16	51206232	87907437	23166	-0.0726
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	17	933971	78510305	36956	-0.0873
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	18	319586	75210228	42649	0.0028
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	19	235018	63570038	23927	-0.0048
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	20	403764	61690281	37243	0.1279
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	21	14269492	46503202	20573	0.0792
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	22	15803930	47717016	16908	-0.0452
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	X	3167107	154558783	63160	0.0025
