Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	1	3218610	212830961	106688	-0.0384
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	1	212842330	213417913	319	-0.5387
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	1	213418058	247813706	22055	-0.032
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	2	484222	117229770	61062	0.08
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	2	117230217	182151180	36245	-0.477
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	2	182151777	183995536	1095	0.1117
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	2	184002569	184055417	35	-0.4673
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	2	184059983	184207072	70	0.075
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	2	184208719	185345461	498	-0.4743
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	2	185349505	242476062	32214	0.0859
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	3	2212571	58006413	32290	0.0442
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	3	58009259	58015704	5	-0.6951
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	3	58018879	81512551	14397	0.058
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	3	81515052	84168160	1247	-0.4704
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	3	84172797	84533900	182	0.1154
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	3	84578872	84818870	141	-0.479
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	3	84880031	197538677	58061	0.0773
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	4	1053934	5934898	2473	0.0186
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	4	5935406	5936032	2	-1.152
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	4	5939546	112243339	59092	0.0587
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	4	112244790	121125847	5082	-0.3132
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	4	121126632	188763651	36048	0.0669
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	914233	25077244	14593	0.0535
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	25385460	27258700	1100	-0.4808
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	27259432	27371947	62	0.0697
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	27378197	27427790	28	-0.4662
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	27428073	86940597	30705	0.0589
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	86943278	88777792	940	-0.4894
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	88783082	96488207	4067	0.0674
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	96497323	96533469	28	-0.5182
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	96533615	97733025	548	0.0664
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	97734875	97789994	28	-0.483
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	97792694	97944946	101	0.0891
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	97954791	97985653	26	-0.8733
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	97986551	98109029	62	0.0399
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	98111312	98193794	32	-0.5208
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	98194888	98202525	11	0.0317
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	98205297	98256137	29	-0.4474
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	98258933	98266341	4	-1.4562
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	98270264	99704421	185	-0.5114
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	99707871	100624032	369	0.0731
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	100631331	102005038	561	-0.5184
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	102014906	102015083	3	-1.7023
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	102016034	103671906	862	-0.5058
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	103675148	105815850	1049	0.082
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	105817077	105833430	13	-0.29
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	105835080	121092542	9168	0.0672
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	121096394	121108822	16	-0.427
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	5	121109339	180360469	35876	0.0498
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	1014281	64787330	35064	0.0791
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	64818931	87916775	12865	-0.4747
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	87916798	87916815	2	-1.9787
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	87920249	88061039	88	-0.4918
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	88061575	88061653	2	-2.0802
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	88061837	102565089	8034	-0.4876
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	102609349	104943750	1202	0.0656
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	104943785	105676657	423	-0.4949
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	105698528	106202459	327	0.0745
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	106205056	106218408	14	-0.4985
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	106218983	106279847	50	0.0713
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	106282212	106284449	6	-0.423
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	106289306	106336363	42	0.1604
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	6	106338221	170903919	38303	-0.4897
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	7	705284	158385118	81283	0.3664
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	8	617667	8621437	3397	-0.3182
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	8	8623637	12575861	1675	-0.5354
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	8	12577792	41568924	18876	-0.3091
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	8	41575439	41626954	45	0.1916
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	8	41628650	42690714	648	-0.3021
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	8	42701314	91090821	24575	0.2883
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	8	91101339	91172981	42	-0.3347
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	8	91175874	145232496	32232	0.2775
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	9	789932	71376046	23614	0.0066
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	9	71376996	71377966	3	-1.3018
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	9	71378603	82767035	7928	0.0128
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	9	82770941	82802244	24	-0.6246
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	9	82802787	82936534	81	-8e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	9	82936676	82963611	17	-0.4529
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	9	82964123	103864227	13510	0.0318
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	9	103872681	103913811	51	-0.5029
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	9	103917744	140938752	22742	0.0418
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	10	415240	135225087	80823	0.0584
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	456120	26613668	16812	0.0684
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	26613748	38207188	7046	-0.4898
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	38207721	39064358	490	0.0955
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	39070486	39073905	3	-0.6684
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	39077171	39229121	73	0.1197
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	39231644	39231914	3	-0.8044
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	39236338	39259971	14	0.2301
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	39261985	39264181	4	-0.6042
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	39264541	39482523	125	0.1082
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	39483187	41635773	1499	-0.479
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	41640598	43390374	1157	0.0798
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	43392484	43393699	3	-0.7536
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	43398263	43423944	16	0.0569
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	43428921	50055330	3252	-0.5032
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	11	56013798	134142530	46698	0.0717
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	12	889902	9791224	4720	0.0612
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	12	9794665	14564657	2940	-0.4847
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	12	14573896	41522140	13236	0.0922
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	12	41523755	41602979	50	-0.4688
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	12	41603113	51652821	5251	0.084
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	12	51656651	52675333	589	-0.1491
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	12	52675917	133161346	47122	0.0804
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	13	19450806	39066688	12282	0.0646
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	13	39069381	114987458	44331	-0.507
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	14	20501368	47281800	13534	0.0733
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	14	47298088	47906552	352	-0.6394
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	14	47909499	105988038	35522	0.0646
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	15	23687685	59719793	19509	0.0217
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	15	59723253	59723265	2	-1.5343
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	15	59726610	87143423	15853	0.0097
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	15	87145741	87146118	8	-0.6473
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	15	87146148	101884307	9144	0.0224
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	16	653459	52626885	17656	-0.0667
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	16	52629702	52648337	17	-0.7502
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	16	52648731	89379936	23100	-0.0723
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	17	987221	80917016	36956	-0.0873
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	18	329586	77109240	42646	0.0028
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	19	284018	58878226	23927	-0.0048
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	20	455764	62219837	37246	0.1279
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	21	15347621	47678774	20572	0.0791
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	22	17423930	49331012	16907	-0.0452
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_H09_1438952	X	3157107	154905589	63177	0.0026
