#Donor Study_name Data_set TCGA-A2-A0D0 TCGA_Breast_Cancer_S_029 TCGA_A2-A0D0-01A_BH-A0HK-01A_C8-A12T-01A_Proteome_BI_20130326 TCGA-A2-A0D2 TCGA_Breast_Cancer_S_029 TCGA_A2-A0D2-01A_C8-A12U-01A_AR-A1AS-01A_Proteome_BI_20131010 TCGA-A2-A0EV TCGA_Breast_Cancer_S_029 TCGA_A2-A0EV-01A_AN-A0AM-01A_D8-A142-01A_Proteome_BI_20130625 TCGA-A2-A0SW TCGA_Breast_Cancer_S_029 TCGA_A2-A0SW-01A_AO-A0JL-01A_BH-A0BV-01A_Proteome_BI_20131024 TCGA-A2-A0T6 TCGA_Breast_Cancer_S_029 TCGA_A2-A0T6-01A_E2-A158-01A_E2-A15A-01A_Proteome_BI_20130918 TCGA-A2-A0T7 TCGA_Breast_Cancer_S_029 TCGA_A2-A0T7-01A_C8-A12Q-01A_A8-A079-01A_Proteome_BI_20130820 TCGA-A2-A0YF TCGA_Breast_Cancer_S_029 TCGA_A2-A0YF-01A_BH-A0DD-01A_BH-A0E9-01A_Proteome_BI_20131018 TCGA-A7-A0CD TCGA_Breast_Cancer_S_029 TCGA_A7-A0CD-01A_C8-A12W-01A_AN-A0AL-01A_Proteome_BI_20130913 TCGA-A7-A0CE TCGA_Breast_Cancer_S_029 TCGA_A7-A0CE-01A_BH-A0C0-01A_A2-A0YC-01A_Proteome_BI_20130524 TCGA-A7-A0CJ TCGA_Breast_Cancer_S_029 TCGA_A7-A0CJ-01A_AO-A12F-01A_A2-A0YL-01A_Proteome_BI_20130805 TCGA-A8-A06Z TCGA_Breast_Cancer_S_029 TCGA_A8-A06Z-01A_A2-A0D1-01A_A2-A0CM-01A_Proteome_BI_20130401 TCGA-A8-A09G TCGA_Breast_Cancer_S_029 TCGA_A8-A09G-01A_C8-A131-01A_C8-A134-01A_Proteome_BI_20131011 TCGA-A8-A09I TCGA_Breast_Cancer_S_029 TCGA_A8-A09I-01A_C8-A12L-01A_A2-A0EX-01A_Proteome_BI_20130302 TCGA-AN-A0FL TCGA_Breast_Cancer_S_029 TCGA_AN-A0FL-01A_BH-A0DG-01A_AN-A0AS-01A_Proteome_BI_20130726 TCGA-AO-A0JC TCGA_Breast_Cancer_S_029 TCGA_AO-A0JC-01A_A8-A08Z-01A_AR-A0TX-01A_Proteome_BI_20130527 TCGA-AO-A0JM TCGA_Breast_Cancer_S_029 TCGA_AO-A0JM-01A_C8-A12V-01A_A8-A08G-01A_Proteome_BI_20130927 TCGA-AO-A12D TCGA_Breast_Cancer_S_029 05TCGA_AO-A12D-01A_AN-A04A-01A_BH-A0AV-01A_Proteome_BI_20130416 TCGA-AR-A0TR TCGA_Breast_Cancer_S_029 TCGA_AR-A0TR-01A_AO-A03O-01A_BH-A18R-01A_Proteome_BI_20130825 TCGA-AR-A0TT TCGA_Breast_Cancer_S_029 TCGA_AR-A0TT-01A_AR-A1AQ-01A_AO-A12B-01A_Proteome_BI_20131022 TCGA-AR-A0TV TCGA_Breast_Cancer_S_029 TCGA_AR-A0TV-01A_C8-A12Z-01A_AO-A0JJ-01A_Proteome_BI_20130730 TCGA-AR-A0TY TCGA_Breast_Cancer_S_029 TCGA_AR-A0TY-01A_AR-A0U4-01A_BH-A0HP-01A_Proteome_BI_20130408 TCGA-AR-A1AP TCGA_Breast_Cancer_S_029 TCGA_AR-A1AP-01A_AN-A0FK-01A_AO-A0J6-01A_Proteome_BI_20130517 TCGA-AR-A1AW TCGA_Breast_Cancer_S_029 TCGA_AR-A1AW-01A_AR-A1AV-01A_C8-A135-01A_Proteome_BI_20130628 TCGA-BH-A0EE TCGA_Breast_Cancer_S_029 TCGA_BH-A0EE-01A_AO-A0J9-01A_BH-A0E0-01A_Proteome_BI_20130412 TCGA-BH-A18U TCGA_Breast_Cancer_S_029 TCGA_BH-A18U-01A_A2-A0YI-01A_A2-A0EQ-01A_Proteome_BI_20130404 TCGA-BH-A18V TCGA_Breast_Cancer_S_029 TCGA_BH-A18V-01A_A7-A13F-01A_BH-A0E1-01A_Proteome_BI_20130520 TCGA-C8-A12P TCGA_Breast_Cancer_S_029 TCGA_C8-A12P-01A_BH-A0C1-01A_A2-A0EY-01A_Proteome_BI_20130622 TCGA-C8-A138 TCGA_Breast_Cancer_S_029 TCGA_C8-A138-01A_E2-A154-01A_BH-A0BZ-01A_Proteome_BI_20130225 TCGA-D8-A13Y TCGA_Breast_Cancer_S_029 TCGA_D8-A13Y-01A_A8-A076-01A_AO-A126-01A_Proteome_BI_20130617 TCGA-E2-A10A TCGA_Breast_Cancer_S_029 TCGA_E2-A10A-01A_BH-A18Q-01A_C8-A130-01A_Proteome_BI_20130222 TCGA-E2-A159 TCGA_Breast_Cancer_S_029 TCGA_E2-A159-01A_A2-A0T3-01A_A2-A0YD-01A_Proteome_BI_20130823 TCGA-13-1492 TCGA_Ovarian_Cancer_S_026 TCGA_13-1492-01A_36-2530-01A_25-2409-01A_Proteome_JHUZ_20130228 TCGA-24-1431 TCGA_Ovarian_Cancer_S_026 TCGA_24-1431-01A_36-1570-01A_13-1488-01A_Proteome_JHUZ_20130625 TCGA-24-1435 TCGA_Ovarian_Cancer_S_026 TCGA_24-1435-01A_30-1887-01A_23-1121-01A_Proteome_JHUZ_20130522 TCGA-24-1467 TCGA_Ovarian_Cancer_S_026 TCGA_24-1467-01A_29-2432-01A_25-1321-01A_Proteome_PNNL_20130303 TCGA-24-1474 TCGA_Ovarian_Cancer_S_026 TCGA_24-1474-01A_13-1501-01A_OVARIAN-CONTROL_Proteome_JHUZ_20130228 TCGA-24-2298 TCGA_Ovarian_Cancer_S_026 TCGA_24-2298-01A_24-1544-01A_61-1914-01A_Proteome_JHUZ_20130802 TCGA-25-1316 TCGA_Ovarian_Cancer_S_026 TCGA_25-1316-01A_24-1550-01A_24-1555-01A_Proteome_PNNL_20130303 TCGA-25-1319 TCGA_Ovarian_Cancer_S_026 TCGA_25-1319-01A_24-2289-01A_42-2588-01A_Proteome_PNNL_20130518 TCGA-25-2400 TCGA_Ovarian_Cancer_S_026 TCGA_25-2400-01A_30-1866-01A_25-2409-01A_Proteome_PNNL_20130622 TCGA-29-1696 TCGA_Ovarian_Cancer_S_026 TCGA_29-1696-01A_29-1771-01A_13-2066-01A_Proteome_JHUZ_20130903 TCGA-29-1774 TCGA_Ovarian_Cancer_S_026 TCGA_29-1774-01A_36-1576-01A_24-2030-01A_Proteome_PNNL_20130522 TCGA-29-1777 TCGA_Ovarian_Cancer_S_026 TCGA_29-1777-01A_61-2008-01A_24-1551-01A_Proteome_PNNL_20130518 TCGA-59-2351 TCGA_Ovarian_Cancer_S_026 TCGA_59-2351-01A_24-2290-01A_59-2348-01A_Proteome_JHUZ_20130802 TCGA-61-1914 TCGA_Ovarian_Cancer_S_026 TCGA_61-1914-01A_61-1900-01A_09-1664-01A_Proteome_PNNL_20130924 TCGA-13-1489 TCGA_Ovarian_Cancer_S_026 TCGA_13-1489-01A_13-1482-01A_13-1504-01A_Proteome_JHUZ_20130903 TCGA-13-1497 TCGA_Ovarian_Cancer_S_026 TCGA_13-1497-01A_OVARIAN-CONTROL_61-1995-01A_Proteome_JHUZ_20130802 TCGA-23-1122 TCGA_Ovarian_Cancer_S_026 TCGA_23-1122-01A_24-1464-01A_25-1322-01A_Proteome_JHUZ_20130625 TCGA-24-1103 TCGA_Ovarian_Cancer_S_026 TCGA_24-1103-01A_24-2289-01A_13-1511-01A_Proteome_JHUZ_20130228 TCGA-24-1430 TCGA_Ovarian_Cancer_S_026 TCGA_24-1430-01A_24-1466-01A_24-1552-01A_Proteome_PNNL_20130813 TCGA-24-2024 TCGA_Ovarian_Cancer_S_026 TCGA_24-2024-01A_29-1693-01A_13-1485-01A_Proteome_JHUZ_20130228 TCGA-25-1313 TCGA_Ovarian_Cancer_S_026 TCGA_25-1313-01A_29-1766-01A_24-2261-01A_Proteome_JHUZ_20130625 TCGA-25-2399 TCGA_Ovarian_Cancer_S_026 TCGA_25-2399-01A_29-1698-01A_09-2056-01B_Proteome_JHUZ_20130228 TCGA-29-1688 TCGA_Ovarian_Cancer_S_026 TCGA_29-1688-01A_13-1494-01A_13-1507-01A_Proteome_JHUZ_20130228 TCGA-29-1697 TCGA_Ovarian_Cancer_S_026 TCGA_29-1697-01A_13-1488-01A_25-1623-01A_Proteome_PNNL_20130923 TCGA-29-1711 TCGA_Ovarian_Cancer_S_026 TCGA_29-1711-01A_13-1483-01A_24-1422-01A_Proteome_JHUZ_20130522 TCGA-29-1762 TCGA_Ovarian_Cancer_S_026 TCGA_29-1762-01A_13-2071-01A_36-2543-01A_Proteome_PNNL_20130302 TCGA-29-1763 TCGA_Ovarian_Cancer_S_026 TCGA_29-1763-01A_25-2397-01A_29-2427-01A_Proteome_JHUZ_20130625 TCGA-29-1785 TCGA_Ovarian_Cancer_S_026 TCGA_29-1785-01A_61-2088-01A_25-1623-01A_Proteome_JHUZ_20130623 TCGA-59-2352 TCGA_Ovarian_Cancer_S_026 TCGA_59-2352-01A_61-1915-01A_24-1565-01A_Proteome_JHUZ_20130903 TCGA-61-1741 TCGA_Ovarian_Cancer_S_026 TCGA_61-1741-01A_61-1911-01A_13-1404-01A_Proteome_JHUZ_20130625 TCGA-61-1907 TCGA_Ovarian_Cancer_S_026 TCGA_61-1907-01A_25-1329-01A_24-1557-01A_Proteome_JHUZ_20130623 TCGA-61-1910 TCGA_Ovarian_Cancer_S_026 TCGA_61-1910-01A_29-1770-01A_13-1410-01A_Proteome_JHUZ_20130522