#Donor	Study_name	Data_set
TCGA-A2-A0D0	TCGA_Breast_Cancer_S_029	TCGA_A2-A0D0-01A_BH-A0HK-01A_C8-A12T-01A_Proteome_BI_20130326
TCGA-A2-A0D2	TCGA_Breast_Cancer_S_029	TCGA_A2-A0D2-01A_C8-A12U-01A_AR-A1AS-01A_Proteome_BI_20131010
TCGA-A2-A0EV	TCGA_Breast_Cancer_S_029	TCGA_A2-A0EV-01A_AN-A0AM-01A_D8-A142-01A_Proteome_BI_20130625
TCGA-A2-A0SW	TCGA_Breast_Cancer_S_029	TCGA_A2-A0SW-01A_AO-A0JL-01A_BH-A0BV-01A_Proteome_BI_20131024
TCGA-A2-A0T6	TCGA_Breast_Cancer_S_029	TCGA_A2-A0T6-01A_E2-A158-01A_E2-A15A-01A_Proteome_BI_20130918
TCGA-A2-A0T7	TCGA_Breast_Cancer_S_029	TCGA_A2-A0T7-01A_C8-A12Q-01A_A8-A079-01A_Proteome_BI_20130820
TCGA-A2-A0YF	TCGA_Breast_Cancer_S_029	TCGA_A2-A0YF-01A_BH-A0DD-01A_BH-A0E9-01A_Proteome_BI_20131018
TCGA-A7-A0CD	TCGA_Breast_Cancer_S_029	TCGA_A7-A0CD-01A_C8-A12W-01A_AN-A0AL-01A_Proteome_BI_20130913
TCGA-A7-A0CE	TCGA_Breast_Cancer_S_029	TCGA_A7-A0CE-01A_BH-A0C0-01A_A2-A0YC-01A_Proteome_BI_20130524
TCGA-A7-A0CJ	TCGA_Breast_Cancer_S_029	TCGA_A7-A0CJ-01A_AO-A12F-01A_A2-A0YL-01A_Proteome_BI_20130805
TCGA-A8-A06Z	TCGA_Breast_Cancer_S_029	TCGA_A8-A06Z-01A_A2-A0D1-01A_A2-A0CM-01A_Proteome_BI_20130401
TCGA-A8-A09G	TCGA_Breast_Cancer_S_029	TCGA_A8-A09G-01A_C8-A131-01A_C8-A134-01A_Proteome_BI_20131011
TCGA-A8-A09I	TCGA_Breast_Cancer_S_029	TCGA_A8-A09I-01A_C8-A12L-01A_A2-A0EX-01A_Proteome_BI_20130302
TCGA-AN-A0FL	TCGA_Breast_Cancer_S_029	TCGA_AN-A0FL-01A_BH-A0DG-01A_AN-A0AS-01A_Proteome_BI_20130726
TCGA-AO-A0JC	TCGA_Breast_Cancer_S_029	TCGA_AO-A0JC-01A_A8-A08Z-01A_AR-A0TX-01A_Proteome_BI_20130527
TCGA-AO-A0JM	TCGA_Breast_Cancer_S_029	TCGA_AO-A0JM-01A_C8-A12V-01A_A8-A08G-01A_Proteome_BI_20130927
TCGA-AO-A12D	TCGA_Breast_Cancer_S_029	05TCGA_AO-A12D-01A_AN-A04A-01A_BH-A0AV-01A_Proteome_BI_20130416
TCGA-AR-A0TR	TCGA_Breast_Cancer_S_029	TCGA_AR-A0TR-01A_AO-A03O-01A_BH-A18R-01A_Proteome_BI_20130825
TCGA-AR-A0TT	TCGA_Breast_Cancer_S_029	TCGA_AR-A0TT-01A_AR-A1AQ-01A_AO-A12B-01A_Proteome_BI_20131022
TCGA-AR-A0TV	TCGA_Breast_Cancer_S_029	TCGA_AR-A0TV-01A_C8-A12Z-01A_AO-A0JJ-01A_Proteome_BI_20130730
TCGA-AR-A0TY	TCGA_Breast_Cancer_S_029	TCGA_AR-A0TY-01A_AR-A0U4-01A_BH-A0HP-01A_Proteome_BI_20130408
TCGA-AR-A1AP	TCGA_Breast_Cancer_S_029	TCGA_AR-A1AP-01A_AN-A0FK-01A_AO-A0J6-01A_Proteome_BI_20130517
TCGA-AR-A1AW	TCGA_Breast_Cancer_S_029	TCGA_AR-A1AW-01A_AR-A1AV-01A_C8-A135-01A_Proteome_BI_20130628
TCGA-BH-A0EE	TCGA_Breast_Cancer_S_029	TCGA_BH-A0EE-01A_AO-A0J9-01A_BH-A0E0-01A_Proteome_BI_20130412
TCGA-BH-A18U	TCGA_Breast_Cancer_S_029	TCGA_BH-A18U-01A_A2-A0YI-01A_A2-A0EQ-01A_Proteome_BI_20130404
TCGA-BH-A18V	TCGA_Breast_Cancer_S_029	TCGA_BH-A18V-01A_A7-A13F-01A_BH-A0E1-01A_Proteome_BI_20130520
TCGA-C8-A12P	TCGA_Breast_Cancer_S_029	TCGA_C8-A12P-01A_BH-A0C1-01A_A2-A0EY-01A_Proteome_BI_20130622
TCGA-C8-A138	TCGA_Breast_Cancer_S_029	TCGA_C8-A138-01A_E2-A154-01A_BH-A0BZ-01A_Proteome_BI_20130225
TCGA-D8-A13Y	TCGA_Breast_Cancer_S_029	TCGA_D8-A13Y-01A_A8-A076-01A_AO-A126-01A_Proteome_BI_20130617
TCGA-E2-A10A	TCGA_Breast_Cancer_S_029	TCGA_E2-A10A-01A_BH-A18Q-01A_C8-A130-01A_Proteome_BI_20130222
TCGA-E2-A159	TCGA_Breast_Cancer_S_029	TCGA_E2-A159-01A_A2-A0T3-01A_A2-A0YD-01A_Proteome_BI_20130823
TCGA-13-1492	TCGA_Ovarian_Cancer_S_026	TCGA_13-1492-01A_36-2530-01A_25-2409-01A_Proteome_JHUZ_20130228
TCGA-24-1431	TCGA_Ovarian_Cancer_S_026	TCGA_24-1431-01A_36-1570-01A_13-1488-01A_Proteome_JHUZ_20130625
TCGA-24-1435	TCGA_Ovarian_Cancer_S_026	TCGA_24-1435-01A_30-1887-01A_23-1121-01A_Proteome_JHUZ_20130522
TCGA-24-1467	TCGA_Ovarian_Cancer_S_026	TCGA_24-1467-01A_29-2432-01A_25-1321-01A_Proteome_PNNL_20130303
TCGA-24-1474	TCGA_Ovarian_Cancer_S_026	TCGA_24-1474-01A_13-1501-01A_OVARIAN-CONTROL_Proteome_JHUZ_20130228
TCGA-24-2298	TCGA_Ovarian_Cancer_S_026	TCGA_24-2298-01A_24-1544-01A_61-1914-01A_Proteome_JHUZ_20130802
TCGA-25-1316	TCGA_Ovarian_Cancer_S_026	TCGA_25-1316-01A_24-1550-01A_24-1555-01A_Proteome_PNNL_20130303
TCGA-25-1319	TCGA_Ovarian_Cancer_S_026	TCGA_25-1319-01A_24-2289-01A_42-2588-01A_Proteome_PNNL_20130518
TCGA-25-2400	TCGA_Ovarian_Cancer_S_026	TCGA_25-2400-01A_30-1866-01A_25-2409-01A_Proteome_PNNL_20130622
TCGA-29-1696	TCGA_Ovarian_Cancer_S_026	TCGA_29-1696-01A_29-1771-01A_13-2066-01A_Proteome_JHUZ_20130903
TCGA-29-1774	TCGA_Ovarian_Cancer_S_026	TCGA_29-1774-01A_36-1576-01A_24-2030-01A_Proteome_PNNL_20130522
TCGA-29-1777	TCGA_Ovarian_Cancer_S_026	TCGA_29-1777-01A_61-2008-01A_24-1551-01A_Proteome_PNNL_20130518
TCGA-59-2351	TCGA_Ovarian_Cancer_S_026	TCGA_59-2351-01A_24-2290-01A_59-2348-01A_Proteome_JHUZ_20130802
TCGA-61-1914	TCGA_Ovarian_Cancer_S_026	TCGA_61-1914-01A_61-1900-01A_09-1664-01A_Proteome_PNNL_20130924
TCGA-13-1489	TCGA_Ovarian_Cancer_S_026	TCGA_13-1489-01A_13-1482-01A_13-1504-01A_Proteome_JHUZ_20130903
TCGA-13-1497	TCGA_Ovarian_Cancer_S_026	TCGA_13-1497-01A_OVARIAN-CONTROL_61-1995-01A_Proteome_JHUZ_20130802
TCGA-23-1122	TCGA_Ovarian_Cancer_S_026	TCGA_23-1122-01A_24-1464-01A_25-1322-01A_Proteome_JHUZ_20130625
TCGA-24-1103	TCGA_Ovarian_Cancer_S_026	TCGA_24-1103-01A_24-2289-01A_13-1511-01A_Proteome_JHUZ_20130228
TCGA-24-1430	TCGA_Ovarian_Cancer_S_026	TCGA_24-1430-01A_24-1466-01A_24-1552-01A_Proteome_PNNL_20130813
TCGA-24-2024	TCGA_Ovarian_Cancer_S_026	TCGA_24-2024-01A_29-1693-01A_13-1485-01A_Proteome_JHUZ_20130228
TCGA-25-1313	TCGA_Ovarian_Cancer_S_026	TCGA_25-1313-01A_29-1766-01A_24-2261-01A_Proteome_JHUZ_20130625
TCGA-25-2399	TCGA_Ovarian_Cancer_S_026	TCGA_25-2399-01A_29-1698-01A_09-2056-01B_Proteome_JHUZ_20130228
TCGA-29-1688	TCGA_Ovarian_Cancer_S_026	TCGA_29-1688-01A_13-1494-01A_13-1507-01A_Proteome_JHUZ_20130228
TCGA-29-1697	TCGA_Ovarian_Cancer_S_026	TCGA_29-1697-01A_13-1488-01A_25-1623-01A_Proteome_PNNL_20130923
TCGA-29-1711	TCGA_Ovarian_Cancer_S_026	TCGA_29-1711-01A_13-1483-01A_24-1422-01A_Proteome_JHUZ_20130522
TCGA-29-1762	TCGA_Ovarian_Cancer_S_026	TCGA_29-1762-01A_13-2071-01A_36-2543-01A_Proteome_PNNL_20130302
TCGA-29-1763	TCGA_Ovarian_Cancer_S_026	TCGA_29-1763-01A_25-2397-01A_29-2427-01A_Proteome_JHUZ_20130625
TCGA-29-1785	TCGA_Ovarian_Cancer_S_026	TCGA_29-1785-01A_61-2088-01A_25-1623-01A_Proteome_JHUZ_20130623
TCGA-59-2352	TCGA_Ovarian_Cancer_S_026	TCGA_59-2352-01A_61-1915-01A_24-1565-01A_Proteome_JHUZ_20130903
TCGA-61-1741	TCGA_Ovarian_Cancer_S_026	TCGA_61-1741-01A_61-1911-01A_13-1404-01A_Proteome_JHUZ_20130625
TCGA-61-1907	TCGA_Ovarian_Cancer_S_026	TCGA_61-1907-01A_25-1329-01A_24-1557-01A_Proteome_JHUZ_20130623
TCGA-61-1910	TCGA_Ovarian_Cancer_S_026	TCGA_61-1910-01A_29-1770-01A_13-1410-01A_Proteome_JHUZ_20130522