Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	1	3208470	58690031	30219	0.1396
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	1	58691287	58691430	2	-1.2284
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	1	58691549	67874228	6433	0.1224
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	1	67874930	67877774	2	-1.1459
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	1	67879093	73712636	3187	0.0979
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	1	73712912	73713306	3	-1.165
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	1	73713840	245880329	88886	0.107
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	2	474222	88887706	50151	0.0908
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	2	88888132	88888418	4	-1.3879
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	2	88888484	135124249	19736	0.0957
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	2	135131358	135131985	2	-1.4698
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	2	135134969	141105552	3073	0.079
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	2	141109431	141167515	33	-0.4491
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	2	141171375	242124735	57994	0.0821
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	3	526235	169100491	90677	0.0991
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	3	169103220	169108914	3	-1.7492
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	3	169111033	199023074	15440	0.0986
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	4	1043934	1640394	168	0.144
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	4	1641894	1979241	137	-0.0941
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	4	1997708	2456284	202	0.1375
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	4	2457164	4566457	852	-0.1246
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	4	4569000	17134875	8782	0.1187
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	4	17135349	17571795	264	-0.1456
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	4	17581254	189836143	92132	0.0931
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	5	967233	179320915	99850	0.1027
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	5	179320969	179383547	42	-0.4229
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	5	179385683	180293075	390	0.1212
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	6	959281	62383474	33817	0.0407
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	6	62383532	62384209	2	-1.5491
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	6	62384976	64500346	978	-0.1466
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	6	64501691	156140462	53400	-0.4592
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	6	156141163	156145617	3	-2.0447
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	6	156146056	170745844	7869	-0.4684
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	7	671810	11527178	4451	0.3363
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	7	11527302	11528378	2	-1.1887
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	7	11532286	32239384	13225	0.3193
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	7	32243641	33090530	506	2.4207
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	7	33157116	34926888	1142	0.3218
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	7	34929100	34931802	2	1.6236
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	7	34935367	39876731	3397	0.319
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	7	39879528	39879934	3	1.6992
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	7	39881075	54029486	8954	0.348
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	7	54036038	54584867	335	2.5269
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	7	54586601	54884753	224	1.4047
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	7	54906910	56223504	866	2.5248
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	7	56232225	118446125	27072	0.4952
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	7	118446419	118457338	8	-0.9101
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	7	118459081	119388806	419	0.4766
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	7	119393868	119401077	7	-0.8568
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	7	119407043	158077879	20584	0.5024
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	8	607667	1202852	163	0.1156
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	8	1205940	1207988	4	-0.6931
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	8	1211116	1607318	278	0.142
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	8	1607708	1613627	8	-0.4332
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	8	1614581	1772266	80	0.068
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	8	1776353	1873449	80	-0.2332
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	8	1879307	145304484	80741	0.1029
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	779932	20376383	12325	-0.4491
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	20380268	21087432	506	-1.3214
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	21087471	21090141	5	-4.0691
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	21090517	21807777	460	-1.3411
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	21807930	22209275	262	-0.4234
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	22209365	22422666	116	-1.2576
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	22436297	22671422	134	-0.4303
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	22671728	22687535	23	-1.5203
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	22699361	23184166	310	-0.5077
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	23186532	23515526	212	-1.3621
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	23518037	23848110	281	-0.3987
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	23849224	24184441	193	-1.3666
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	24194691	24262883	49	-0.4028
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	24268837	24340222	36	-1.1922
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	24341621	24840287	255	-0.4486
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	24843038	24943447	71	-1.3863
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	24948736	25160303	156	-0.4163
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	25161575	25855159	376	-1.3691
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	25861449	25906353	21	-0.4882
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	25909748	26719443	383	-1.4124
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	26719500	27386135	485	-0.4357
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	27388306	27388544	3	-1.8413
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	27391297	27633053	188	-0.4991
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	27636557	27977675	305	-1.4206
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	27978081	28397506	137	-0.4554
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	28398040	28533418	91	-1.4616
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	28533775	31146024	1086	-0.448
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	31154389	31154431	2	-2.536
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	31162350	107409374	29113	-0.4349
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	107411158	107412550	3	-2.1924
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	9	107414644	140058573	20008	-0.4295
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	10	405240	7436959	4642	-0.4412
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	10	7437464	7438013	2	-2.4521
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	10	7438754	15709436	6367	-0.447
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	10	15710975	15713451	6	-2.3374
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	10	15714011	15714213	3	-6.8069
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	10	15714422	35860820	13100	-0.4395
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	10	35861565	35862786	2	-2.8115
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	10	35864197	54790183	7132	-0.4324
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	10	54790856	54812107	39	-2.1229
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	10	54812169	89578451	20599	-0.4431
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	10	89588674	89619902	36	-1.1045
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	10	89621492	135075077	28495	-0.4414
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	11	446120	133647740	77080	0.1107
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	12	760163	15116033	8061	0.117
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	12	15127514	15127566	2	-1.5479
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	12	15128504	30991216	10075	0.0999
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	12	30994163	31024332	39	0.6397
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	12	31025053	103972790	40538	0.1009
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	12	103976067	104080346	75	0.5208
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	12	104081370	131671419	14989	0.123
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	13	18348806	25189452	3427	0.1094
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	13	25189931	25190954	4	-1.7602
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	13	25192203	49392585	16132	0.1024
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	13	50522283	50706840	117	-0.4945
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	13	50706917	51314568	321	0.1036
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	13	51314753	51346551	36	-0.458
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	13	51348545	51570835	125	0.1425
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	13	51574016	52278162	199	-0.427
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	13	52288674	52619083	244	0.1046
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	13	52622623	52788242	93	-0.452
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	13	52790198	53115214	201	0.1119
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	13	53116783	53293221	118	-0.4209
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	13	53293239	53294932	2	-1.5385
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	13	53295025	53798193	259	-0.3979
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	13	53798994	54386920	166	0.1374
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	13	54387006	70175510	7644	-0.4558
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	13	70178320	70178384	2	-3.6371
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	13	70178540	79280413	5985	-0.4647
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	13	79286626	79375817	62	0.1037
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	13	79377298	79382505	12	-0.3236
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	13	79382724	79453433	40	0.0631
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	13	79453606	79726093	207	-0.4547
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	13	79727568	114005560	21084	0.0978
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	14	19571208	43827867	12593	-0.4434
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	14	43828790	43828793	2	-3.3196
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	14	43828946	105059083	36598	-0.4434
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	15	21238778	96333545	42622	0.129
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	15	96336898	96337600	2	-2.4184
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	15	96337733	99701830	1795	0.116
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	16	593460	19419493	8508	0.1406
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	16	19419767	31753198	5340	-0.1068
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	16	31757800	87907437	26821	-0.4222
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	17	933971	72105719	34330	0.1311
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	17	72107977	72107997	2	2.0233
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	17	72109057	78510305	2567	0.1394
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	18	319586	75210228	42568	0.1097
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	19	235018	23844832	8955	0.0715
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	19	32932334	41539601	5670	-0.4243
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	19	41539644	47120532	2631	-0.0963
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	19	47120607	56302106	3537	-0.3921
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	19	56302767	59821717	1224	-0.1079
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	19	59830189	59830214	2	-1.3772
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	19	59830393	63570038	1837	-0.0996
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	20	403764	23113015	15267	0.1213
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	20	23118731	23127989	15	-0.403
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	20	23129782	61690281	21888	0.1296
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	21	14269492	44821715	19844	0.1191
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	21	44823708	44833692	8	-1.0172
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	21	44839067	46503202	684	0.145
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	22	15803930	47717016	16797	-0.4154
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	X	3167107	88765447	34347	0.0052
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	X	88766106	88775508	4	0.7771
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	X	88779076	119013379	12902	-0.0062
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	X	119013862	119013998	2	1.5065
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	X	119014273	131078779	5556	0.0077
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	X	131079007	131116155	22	-0.428
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_G09_1377706	X	131126991	154558783	10273	0.0072
