Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	1	3218610	184136482	88925	0.0118
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	1	184136553	184257813	92	0.35
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	1	184261108	201254116	9950	-0.003
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	1	201255199	201692966	348	0.3808
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	1	201696540	204376208	1640	0.0236
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	1	204382589	204792596	341	0.4009
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	1	204792995	247813706	27583	0.0085
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	2	484222	6614988	3482	-0.0116
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	2	6615268	6615530	3	-1.3397
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	2	6616139	24769918	11907	0.0016
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	2	24772795	24773620	2	-1.6656
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	2	24777819	40682370	8263	0.0014
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	2	40685297	40687170	2	-1.6457
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	2	40687437	71999008	18316	-0.0015
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	2	72000161	72000976	2	-1.7142
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	2	72001264	167944952	46265	-0.0019
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	2	167945041	167949508	6	-0.9551
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	2	167959087	210307659	23400	-0.0014
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	2	210312533	210315026	7	-1.2046
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	2	210317738	242476062	19439	-0.0029
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	3	2212571	48336607	27027	-0.2257
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	3	48339699	48524356	77	0.1748
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	3	48524502	49426900	313	-0.2063
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	3	49428961	49598064	46	0.193
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	3	49600319	52818579	1317	-0.2168
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	3	52821011	52855865	30	0.2693
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	3	52856456	84469742	19215	-0.2354
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	3	84472077	84474551	4	-1.7647
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	3	84479070	197538677	58135	-0.2332
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	4	1053934	1619388	148	0.215
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	4	1619530	1804276	85	0.711
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	4	1816690	95883027	52049	0.198
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	4	95883651	95890890	2	-1.5086
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	4	95891073	122428141	15064	0.1936
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	4	122428870	122429378	2	-1.9547
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	4	122436261	188763651	35250	0.1952
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	5	914233	30391432	17346	0.2064
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	5	30392067	30392184	2	-2.1614
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	5	30395852	180360469	83015	0.2195
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	6	1014281	37609305	21751	-0.2301
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	6	37616076	37620100	2	-2.0698
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	6	37626142	111920064	39712	-0.2391
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	6	111922720	112038640	84	0.05
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	6	112040666	118548258	3798	-0.2427
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	6	119138028	119281526	49	0.0957
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	6	119283705	162369869	27057	-0.2303
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	6	162370784	164587535	1014	-0.577
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	6	164587932	164816418	115	-0.2269
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	6	164817238	165230026	228	-0.6067
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	6	165230370	165437622	139	-0.2518
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	6	165439028	165620915	143	-0.5881
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	6	165621452	165622132	2	-2.2403
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	6	165622609	165712918	65	-0.5544
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	6	165713760	165790482	27	-0.2745
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	6	165790812	165798963	10	-0.702
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	6	165807107	170903919	2102	-0.2443
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	7	705284	115137915	58125	0.2081
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	7	115138008	115145881	8	-1.5946
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	7	115146717	125107738	5571	0.2017
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	7	125115157	125115603	6	-1.2848
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	7	125118576	135488621	5711	0.2158
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	7	135505300	135508262	6	-1.7628
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	7	135510241	140528571	2894	0.2074
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	7	140528822	140529099	3	-1.9803
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	7	140531561	158385118	8881	0.2155
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	8	617667	69878985	37348	0.1929
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	8	69879173	69880186	2	-1.5144
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	8	69883967	125584475	31832	0.187
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	8	125584545	125584940	2	-1.6482
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	8	125593594	145232496	12232	0.2003
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	9	789932	2275401	899	-0.2051
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	9	2281999	2295279	20	-1.057
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	9	2322101	123353103	57693	-0.2224
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	9	123353149	123353524	2	-2.2224
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	9	123354104	140938752	9279	-0.2057
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	10	415240	79403934	45661	-0.2522
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	10	79404013	79404268	2	-2.3217
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	10	79410418	82063337	1478	-0.2299
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	10	82072310	82072324	2	-2.7085
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	10	82079680	135225087	33552	-0.244
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	11	456120	33911834	21222	-0.2331
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	11	33913568	34227327	178	0.0452
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	11	34228306	46379442	7778	-0.2346
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	11	46386087	46449683	23	0.4988
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	11	46456084	63641439	5370	-0.2268
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	11	63641510	75481664	4983	0.013
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	11	75483563	75483623	2	1.585
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	11	75484850	101667702	16265	-0.0037
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	11	101668066	101668330	2	-1.6234
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	11	101668820	131843403	20075	0.0024
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	11	131844303	132009866	144	0.3279
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	11	132010117	134142530	1083	-0.0265
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	12	889902	3659549	1290	0.0151
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	12	3659776	3774617	108	0.5283
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	12	3774947	32931284	17801	-8e-04
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	12	32933037	32933361	2	-1.8685
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	12	32933893	53112207	7813	0.002
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	12	53115770	53117023	2	-1.9828
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	12	53117157	110178223	34793	4e-04
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	12	110178497	110505699	158	0.5143
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	12	110508450	125158762	8194	0.0047
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	12	125159653	125349751	155	0.5227
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	12	125351116	131910894	3135	-4e-04
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	12	131911189	131911653	6	-0.8962
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	12	131914650	133161346	374	0.0234
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	13	19450806	35155254	9719	0.1916
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	13	35157778	35158524	3	-1.1566
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	13	35160613	79217556	24690	0.1886
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	13	79219119	79365139	100	0.5854
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	13	79369511	79398288	17	0.2768
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	13	79401439	79557319	122	0.6273
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	13	79558885	88663778	5063	0.176
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	13	88667792	88668775	2	-1.4672
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	13	88669953	114987458	16845	0.1903
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	14	20501368	68595918	26397	-0.2331
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	14	68599145	68742609	94	0.0583
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	14	68745540	105988038	22866	-0.2237
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	15	23687685	37328149	6252	0.0068
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	15	37328544	37476433	108	0.3961
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	15	37477952	48182753	5909	0.0039
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	15	48183522	48400889	133	0.351
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	15	48404402	62001132	8918	0.0057
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	15	62011387	62175086	156	0.5201
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	15	62176363	86538053	13360	0.0121
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	15	86538670	86548590	13	-0.6601
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	15	86549964	98260945	7618	-0.0023
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	15	98261025	98261072	2	-2.7023
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	15	98262690	101884307	1982	-9e-04
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	16	653459	89379936	40729	0.1944
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	17	987221	27122166	10463	0.2078
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	17	27123489	27471399	161	0.5153
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	17	27471777	36121566	3928	0.2126
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	17	36122952	36794951	179	0.5308
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	17	36798187	55786797	9536	0.2073
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	17	55790675	56250060	294	0.5543
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	17	56251605	73344711	9288	0.2057
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	17	73344855	73444647	39	0.4893
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	17	73446891	80917016	3046	0.2035
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	18	329586	77109240	42594	0.0018
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	19	284018	4720785	994	-0.0017
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	19	4731171	5427896	274	0.2886
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	19	5433866	8906086	1348	0.0158
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	19	8906101	11315817	1161	0.2898
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	19	11316618	13920207	1136	0.0075
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	19	13925410	34252335	8315	0.287
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	19	34253357	53202902	8353	0.0148
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	19	53486060	54037463	207	0.2922
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	19	54037889	58878226	2119	0.0088
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	20	455764	62219837	37222	0.0066
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	21	15347621	19288192	2366	0.2064
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	21	19290233	19293037	4	-0.8678
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	21	19294819	21103228	1260	0.1857
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	21	21104960	21107956	2	-1.8895
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	21	21108898	47678774	16918	0.203
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	22	17423930	49331012	16887	-0.2411
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	X	3157107	127517673	51116	0.0012
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	X	127720918	127721326	2	-3.423
INCUS_p_TCGAb3_43_44_45_46_STY_GenomeWideSNP_6_H01_1377686	X	127723774	154905589	11882	-0.0046
