Investigation Title	TCGA Analysis of RNA Expression Array Data for Acute Myeloid Leukemia Using Affymetrix HG-U133 Plus 2.0			
Experimental Design	disease_state_design			
Experimental Design Term Source REF	MGED Ontology			
Experimental Factor Name	Acute Myeloid Leukemia			
Experimental Factor Type	disease_state			
Experimental Factor Type Term Source REF	MGED Ontology			
				
Person Last Name	Leong	Ley		
Person First Name	Shin	Timothy		
Person Mid Initials				
Person Email	sleong@genome.wustl.edu	n/a		
Person Phone	(314) 286-1800	(314) 286-1800		
Person Address	Campus Box 8501, 4444 Forest Park Ave, St. Louis, MO 63108	Campus Box 8501, 4444 Forest Park Ave, St. Louis, MO 63108		
Person Affiliation	Genome Center Washington University in St. Louis	Genome Center Washington University in St. Louis		
Person Roles	submitter	investigator		
Person Roles Term Source REF	MGED Ontology	MGED Ontology		
				
Quality Control Types	spike_quality_control			
Quality Control Types Term Source REF	MGED Ontology			
Date of Experiment				
Public Release Date				
				
PubMed ID				
Experiment Description	TCGA Analysis of RNA Expression Array Data for Acute Myeloid Leukemia Using Affymetrix HG-U133 Plus 2.0			
				
Protocol Name	genome.wustl.edu:labeling:HG-U133_Plus_2:01	genome.wustl.edu:hybridization:HG-U133_Plus_2:01	genome.wustl.edu:image_acquisition:HG-U133_Plus_2:01	genome.wustl.edu:MAS5_signal:HG-U133_Plus_2:01
Protocol Type	labeling	hybridization	image_acquisition	MAS5_signal
Protocol Description	https://www.affymetrix.com/support/file_download.affx?onloadforward=/support/downloads/manuals/expression_print_manual.zip	https://www.affymetrix.com/support/file_download.affx?onloadforward=/support/downloads/manuals/expression_print_manual.zip	https://www.affymetrix.com/support/file_download.affx?onloadforward=/support/downloads/manuals/expression_print_manual.zip	http://media.affymetrix.com/support/downloads/manuals/expression_console_userguide.pdf
Protocol Parameters				
Protocol Hardware	liquid_handler	hybridization_station	array_scanner	
Protocol Software			Affymetrix GeneChip Operating Software Version 1.4	Expression Console™ Software
Protocol Contact	https://www.affymetrix.com/	https://www.affymetrix.com/	https://www.affymetrix.com/	https://www.affymetrix.com/
Protocol Term Source REF	MGED Ontology	MGED Ontology	MGED Ontology	MGED Ontology
				
SDRF Files	genome.wustl.edu_LAML.HG-U133_Plus_2.1.sdrf.txt			
				
Term Source Name	MGED Ontology	caArray	BCR
Term Source File	http://mged.sourceforge.net/ontologies/MGEDontology.php	http://caarraydb.nci.nih.gov/	http://www.intgen.org
Term Source Version	1.3.1.1	1.4	-
