Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	1	3208470	245880329	128551	0.0019
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	2	474222	242124735	130819	0.0038
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	3	526235	11797403	5608	-0.0038
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	3	11797616	11798345	2	-2.7386
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	3	11804474	30166127	10854	2e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	3	30167548	30167569	2	-2.0385
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	3	30167781	45445678	9065	2e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	3	45450697	45450997	2	-2.5412
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	3	45451044	199023074	80437	0.0011
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	4	1043934	20876970	12430	0.0094
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	4	20876994	20877109	2	-1.6819
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	4	20877328	189836143	89923	0.0039
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	5	967233	24301970	14059	0.0038
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	5	24302394	24306321	2	-1.643
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	5	24306440	29457026	2676	6e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	5	29461586	29463769	2	-1.6778
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	5	29465948	56969783	13323	0.0022
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	5	56970778	56972602	2	1.6017
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	5	56973038	180293075	70048	0.0037
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	6	959281	134738708	74623	0.0018
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	6	134739070	134739133	2	-1.806
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	6	134739689	170745844	21455	0.0032
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	7	671810	158077879	81014	0.0013
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	8	607667	145304484	81208	0.0027
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	9	779932	140058573	67730	0.0022
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	10	405240	79199221	45680	-0.0026
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	10	79199251	79199539	2	-2.2196
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	10	79199813	80089410	706	2e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	10	80089882	80091822	4	-1.2181
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	10	80093105	113227541	19914	0.0019
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	10	113230967	113296788	45	0.5477
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	10	113299091	117728397	3038	0.0088
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	10	117729342	117729491	2	1.5952
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	10	117730260	135075077	11190	0.0015
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	11	446120	133647740	76922	0.0014
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	12	760163	52665617	27627	0.0018
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	12	52665626	52681349	3	-1.4469
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	12	52693050	78677824	15469	-0.0026
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	12	78683166	78683211	3	1.3512
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	12	78688246	131671419	30536	0.0022
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	13	18348806	114005560	56401	0.0024
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	14	19571208	105059083	49262	0.0038
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	15	21238778	99701830	44316	-6e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	16	593460	87907437	40681	-0.0037
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	17	933971	74977784	35583	0.002
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	17	74979374	74979554	2	-1.8143
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	17	74984469	78510305	1250	0.0041
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	18	319586	28153562	14894	0.0063
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	18	28159441	28159734	4	-1.6132
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	18	28163214	75210228	27620	0.0028
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	19	235018	63570038	23877	8e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	20	403764	37467877	20971	0.004
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	20	37472405	37475460	3	-1.5757
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	20	37479542	61690281	16153	-9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	21	14269492	46503202	20506	-0.0023
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	22	15803930	47717016	16856	-0.0041
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	X	3167107	154558783	63576	0.0029
