Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	1	3218610	247813706	128605	0.0019
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	2	484222	242476062	130812	0.0038
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	3	2212571	11822403	5607	-0.0038
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	3	11822616	11823345	2	-2.7386
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	3	11829474	30191123	10853	2e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	3	30192544	30192565	2	-2.0385
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	3	30192777	45470674	9066	2e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	3	45475693	45475993	2	-2.5412
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	3	45476040	197538677	80433	0.0011
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	4	1053934	21267872	12431	0.0094
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	4	21267896	21268011	2	-1.6819
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	4	21268230	188763651	89927	0.0039
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	5	914233	24266213	14061	0.0039
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	5	24266637	24270564	2	-1.643
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	5	24270683	29421269	2676	6e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	5	29425829	29428012	2	-1.6778
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	5	29430191	56934026	13321	0.0022
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	5	56935021	56936845	2	1.6017
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	5	56937281	180360469	70048	0.0037
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	6	1014281	134697015	74628	0.0018
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	6	134697377	134697440	2	-1.806
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	6	134697996	170903919	21457	0.0032
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	7	705284	158385118	81015	0.0013
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	8	617667	18374901	9356	0.0026
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	8	18375290	18375827	3	-1.3286
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	8	18378912	145232496	71856	0.0028
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	9	789932	140938752	67742	0.0022
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	10	415240	79529215	45679	-0.0026
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	10	79529245	79529533	2	-2.2196
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	10	79529807	80419404	706	2e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	10	80419876	80421816	4	-1.2181
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	10	80423099	113237551	19913	0.0019
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	10	113240977	113306798	45	0.5477
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	10	113309101	117738407	3038	0.0088
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	10	117739352	117739501	2	1.5952
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	10	117740270	135225087	11190	0.0015
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	11	456120	134142530	76912	0.0014
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	12	889902	54379350	27623	0.0018
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	12	54379359	54395082	3	-1.4469
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	12	54406783	80153693	15468	-0.0026
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	12	80159035	80159080	3	1.3512
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	12	80164115	133161346	30536	0.0022
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	13	19450806	114987458	56397	0.0024
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	14	20501368	105988038	49260	0.0038
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	15	23687685	101884307	44314	-6e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	16	653459	89379936	40617	-0.0036
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	17	987221	77466189	35583	0.002
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	17	77467779	77467959	2	-1.8143
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	17	77472874	80917016	1250	0.0041
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	18	329586	29899564	14894	0.0063
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	18	29905443	29905736	4	-1.6132
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	18	29909216	77109240	27617	0.0028
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	19	284018	58878226	23877	8e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	20	455764	38034463	20974	0.004
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	20	38038991	38042046	3	-1.5757
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	20	38046128	62219837	16153	-9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	21	15347621	47678774	20505	-0.0023
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	22	17423930	49331012	16855	-0.0041
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_A12_1344360	X	3157107	154905589	63593	0.0029
