Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	61735	603590	33	-0.7384
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	625470	12845863	6483	0.004
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	12852748	13178385	41	-0.555
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	13181534	17048479	2232	0.0088
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	17056457	17190862	25	-0.4937
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	17195155	25583341	5315	4e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	25593128	25646986	28	0.4268
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	25661501	62113102	21385	2e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	62114006	62118187	3	-2.5239
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	62119809	72763370	7341	0.0032
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	72768418	72811148	48	-0.7428
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	72811904	148920952	31995	0.0028
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	148937000	149290775	147	-0.7085
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	149291599	152555767	1515	-0.0286
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	152555795	152586238	29	-1.6366
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	152586278	152590494	5	-0.602
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	152590565	152761955	171	0.0211
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	152762008	152768259	29	-0.5231
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	152768281	169233974	11282	-0.0016
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	169234529	169241766	5	-2.094
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	169242401	174796405	3505	0.0113
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	174796556	174801840	16	-0.582
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	174801854	195830332	14037	9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	195830772	195874907	39	-1.0123
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	195876060	196741316	557	0.0165
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	196741367	196816730	82	-0.3372
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	1	196823317	249224388	35823	4e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	2	12784	98118212	61113	0.0031
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	2	98140747	98162189	9	-1.2753
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	2	98166878	243089456	88453	0.0051
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	3	60345	6646543	5817	-0.0012
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	3	6651128	6653332	23	-0.8379
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	3	6655078	23979303	12001	-0.002
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	3	23981429	23982328	2	-3.12
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	3	23982330	98937784	45773	8e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	3	98944458	98951383	40	-0.5826
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	3	98951834	146379189	29098	0.0026
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	3	146382994	146386132	4	-1.1917
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	3	146391984	162123366	9574	-0.0041
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	3	162137600	162142705	14	-0.7383
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	3	162144248	162513092	263	-0.0055
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	3	162513149	162625995	67	0.6896
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	3	162626572	186698098	14636	-0.0013
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	3	186700837	186700923	2	-1.6131
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	3	186708804	192874747	4487	0.0092
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	3	192877902	192882903	20	0.9987
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	3	192886435	195285898	1475	1e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	3	195383142	195474763	47	-0.445
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	3	195478694	195661550	80	-0.073
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	3	195690846	195739204	10	-0.7471
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	3	195739289	197896118	1082	-0.0173
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	4	12281	8355890	4961	-0.0092
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	4	8357873	8368869	9	-1.1852
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	4	8373602	10223416	819	-0.0256
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	4	10223628	10231498	27	-1.7545
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	4	10234214	14524343	3471	0.0035
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	4	14525723	14528872	2	-1.6135
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	4	14530066	17149771	1932	-0.0136
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	4	17149944	17153078	2	-2.9373
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	4	17153186	45005755	18210	0.0011
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	4	45005852	45006335	4	-1.2743
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	4	45010969	69261064	12797	-0.0042
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	4	69282205	69288142	5	-1.2732
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	4	69294799	69420117	39	-0.0358
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	4	69426448	69429722	3	-1.3292
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	4	69430136	70123510	367	-0.0642
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	4	70127644	70236151	57	-0.4984
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	4	70239096	138085107	40502	-6e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	4	138089547	138095121	21	-0.7001
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	4	138108363	152791692	8861	-0.0041
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	4	152791713	152792567	8	-1.5973
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	4	152792891	161874000	5851	1e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	4	161880018	161885009	26	-0.7648
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	4	161885033	172369346	6649	-0.0069
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	4	172374884	172377776	12	1.2325
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	4	172380371	191027923	12493	-0.0053
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	5	15532	698505	309	-0.0429
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	5	717379	773190	24	0.5324
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	5	773547	809806	16	-0.1232
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	5	817850	833628	15	-0.882
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	5	852566	2076772	722	-0.0203
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	5	2077356	2081825	3	-2.0428
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	5	2085356	12815780	9096	-0.0063
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	5	12815865	12838533	13	0.618
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	5	12849201	15718492	1964	0.0117
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	5	15719222	15720597	11	-0.8525
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	5	15723346	46251306	18537	9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	5	46271008	46273502	8	-2.2663
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	5	46278212	86111756	22014	0.0013
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	5	86115378	86119146	3	-2.4392
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	5	86121629	180790320	60016	2e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	149661	26737032	20216	0.0034
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	26737438	26764545	21	-0.5339
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	26765068	29843434	1445	0.0123
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	29844034	29849267	7	-1.2344
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	29850196	31280823	665	0.0129
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	31286276	31287501	6	1.0946
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	31295406	32454523	511	0.0038
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	32456683	32573771	31	1.1425
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	32574014	52472110	12623	-0.0017
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	52473126	52475358	2	-1.7347
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	52475377	53931067	1100	-8e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	53931084	53931855	8	0.9412
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	53935348	57708272	2191	-0.0029
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	57710913	57713195	4	-1.3138
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	57714204	65336942	2145	-0.001
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	65347544	65348992	2	-2.3043
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	65350776	70173296	3292	-5e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	70178460	70182136	3	-1.565
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	70186272	74592225	2852	4e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	74592457	74601410	9	-2.592
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	74603555	77436532	1766	-0.001
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	77439868	77452757	21	0.6532
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	77461073	78962889	977	-0.0208
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	78969065	79035185	111	-2.3557
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	79039234	103734829	15443	0.0015
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	103737976	103762061	46	-1.2809
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	103765470	150449951	29518	0.0027
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	150450034	150450256	2	-2.4744
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	6	150451024	171051005	14550	0.0045
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	7	43355	148300	90	0.0046
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	7	155066	158626	10	-0.8139
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	7	161442	4362956	2137	0.015
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	7	4365082	4367700	5	-1.2524
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	7	4370566	53663414	35666	-0.0047
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	7	53663624	53663748	2	-1.8826
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	7	53664058	54380373	520	0.0145
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	7	54386505	54386517	6	1.1586
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	7	54393488	56761500	1569	-0.0119
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	7	56762113	56768814	3	-3.1153
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	7	56772166	126045651	37207	-0.0014
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	7	126045686	126046615	9	-1.2311
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	7	126046876	127909954	1245	-0.0053
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	7	127910047	127912958	2	-1.8325
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	7	127913091	141863005	8757	-4e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	7	141864170	141864499	2	-2.1653
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	7	141866502	149845988	4904	0
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	7	149847287	149855335	4	-2.3264
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	7	149855691	154157478	2705	0.0017
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	7	154158573	154159031	2	-1.6766
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	7	154159182	159127004	3351	-0.0089
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	8	31254	7186632	7813	-4e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	8	7186646	7744064	138	0.379
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	8	7745979	7747699	4	1.5473
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	8	7752048	8385797	387	0.0245
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	8	8386150	8386442	4	-2.1639
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	8	8388307	11895245	2917	-0.0062
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	8	11934660	12034997	10	0.7412
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	8	12162739	12198254	7	-0.179
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	8	12216009	12241505	20	-1.1897
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	8	12241813	12247486	20	-0.4334
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	8	12260927	18265154	5382	9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	8	18266157	18271185	4	-1.9098
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	8	18271387	74930195	33907	-0.0043
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	8	74934216	74938776	3	-1.5851
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	8	74939470	112291494	22167	0.0037
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	8	112294279	112295260	10	-1.7194
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	8	112300281	115632043	1822	0.0031
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	8	115634487	115638395	15	-0.987
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	8	115638467	146298155	21046	0.0012
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	9	46587	1446459	1463	-0.0048
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	9	1446987	1450320	12	-0.9784
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	9	1453039	43583463	29810	0.0045
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	9	43602726	43800186	28	-0.6096
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	9	44114872	90522594	14662	-0.0055
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	9	90554151	90554219	2	-1.8653
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	9	90557957	141091394	33663	-8e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	10	72759	4290814	3576	0.0134
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	10	4290838	4291016	3	1.9646
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	10	4294071	8802912	4018	0.017
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	10	8802920	8803252	2	-1.6123
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	10	8807902	24375263	11578	0.0011
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	10	24377674	24378054	11	0.774
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	10	24378908	48771950	12955	-0.0017
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	10	48837810	48840627	2	2.6682
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	10	48883402	135506704	58661	3e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	11	198510	4968510	2466	0.006
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	11	4970243	4976493	33	0.4541
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	11	4976534	5520975	540	0.0317
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	11	5522151	5523593	7	-0.701
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	11	5524464	5787405	237	-0.0088
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	11	5788080	5809139	32	-0.8591
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	11	5809338	25605844	14687	-0.0019
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	11	25608546	25624741	23	-1.0472
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	11	25633583	54940342	16300	-2e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	11	54965608	55036472	15	-0.6135
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	11	55039257	55376280	202	7e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	11	55376498	55442318	40	-0.6159
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	11	55444211	107238656	32370	0.0017
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	11	107238671	107239128	6	-1.6146
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	11	107252362	134944770	19868	-0.0012
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	12	150442	9630556	6178	-0.0013
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	12	9633870	9715565	24	-1.5682
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	12	9728292	11226913	1045	0.0245
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	12	11231455	11241532	6	-1.8969
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	12	11251874	13722313	1981	0.0159
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	12	13724306	13725098	2	-1.7961
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	12	13729310	85749313	43699	5e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	12	85749398	85749416	2	-1.9001
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	12	85749793	129228886	28756	0.0031
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	12	129230513	129232545	7	-1.1696
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	12	129233988	132120715	2484	0.01
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	12	132132584	132133335	13	-1.8606
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	12	132142331	133778189	569	0.0039
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	13	19026949	32532121	9605	0.0055
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	13	32532622	32538423	18	-1.006
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	13	32540047	38070370	3882	-0.0018
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	13	38071135	38084757	17	-0.6613
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	13	38088330	62984695	15659	0.0092
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	13	62988076	62990070	3	-1.7418
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	13	62991286	115108397	34883	0.0038
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	14	19002124	20423372	190	-0.3176
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	14	20424926	40608928	12868	1e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	14	40613922	40616919	2	-2.669
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	14	40618165	74001123	21152	2e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	14	74006707	74020979	8	-1.8448
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	14	74029900	107285437	21177	0.0045
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	15	20016328	20216955	49	-0.0027
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	15	20231906	20395529	12	-0.6032
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	15	20411378	20581562	43	0.149
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	15	20581564	20586957	13	-0.6038
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	15	20590027	22363231	217	0.3292
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	15	22373070	22383201	7	-0.4295
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	15	22385001	22587474	81	0.5982
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	15	22673399	102469040	51449	0.003
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	16	60777	19944363	13471	-0.0044
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	16	19945650	19967362	29	-1.0114
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	16	19970254	34447886	6967	5e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	16	34448211	34448485	2	-1.7576
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	16	34449303	86238171	29299	-0.0047
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	16	86244517	86257108	20	-1.251
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	16	86257213	90287535	2456	-0.0063
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	17	526	54159044	29392	-2e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	17	54160914	54172591	26	-0.8247
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	17	54172823	62209307	4391	0.001
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	17	62209851	62214650	3	-1.2726
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	17	62215826	81049726	11329	0.0043
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	18	11543	38258705	22771	-0.0011
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	18	38258727	38269812	22	-0.6347
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	18	38270072	40056657	1210	0.0039
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	18	40056672	40057767	21	-0.5771
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	18	40058395	78015057	26640	0.0014
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	19	90910	4788427	1278	-0.0295
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	19	4789484	4789525	2	-2.1372
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	19	4795342	43786678	19455	0.0011
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	19	43789914	43856684	31	-0.886
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	19	43866823	43885070	9	0.0811
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	19	43885085	43962697	46	0.6435
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	19	43963643	56282369	6598	-0.0067
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	19	56282535	56283067	3	-1.8857
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	19	56286293	59097854	1843	0.0145
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	20	61305	62956153	42338	-5e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	21	10736871	48096957	24326	0.0045
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	22	16052528	24344422	4608	-0.0118
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	22	24350529	24396814	19	-1.7121
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	22	24401529	51234455	18859	-9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	X	168477	150292898	81945	0.0016
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	X	150293934	150295459	2	-2.6968
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	X	150296555	155182354	2424	-0.0047
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	Y	2650438	2985595	152	-2.8402
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	Y	2985939	6110498	720	-2.4456
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	Y	6112554	6344503	104	-3.8164
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	Y	6356305	8838495	1351	-2.9742
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	Y	8838878	9823373	317	-3.4108
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	Y	9826040	15590276	933	-2.8598
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	Y	15590342	15594523	3	-7.5522
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	Y	15594889	19034392	1826	-2.9511
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	Y	19038302	19297985	113	-3.5274
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	Y	19300250	19584800	149	-2.9107
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	Y	19585097	21088297	698	-3.5791
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	Y	21088485	23859163	1053	-3.0088
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	Y	23859468	27315972	687	-3.5537
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	Y	27367487	27718290	92	-2.8111
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	Y	27720551	28423938	252	-3.679
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_B07_1344406	Y	28438116	59018259	183	-2.6871
