Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	1	3208470	245880329	128344	0.0032
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	2	474222	3798547	1432	0.0041
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	2	3799127	3801696	2	-2.3573
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	2	3801840	68352387	38232	0.0035
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	2	68352422	68354691	2	-2.5817
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	2	68356068	242124735	90938	0.0048
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	3	526235	199023074	105809	-0.0019
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	4	1043934	189836143	102216	-7e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	5	967233	7747223	4784	0.0064
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	5	7748442	7748845	3	-1.639
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	5	7751443	15186778	4935	-0.0014
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	5	15189651	15193902	2	-1.5456
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	5	15196277	15391164	103	0.0588
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	5	15391277	15391345	2	-1.9372
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	5	15391536	180293075	90148	-3e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	6	959281	170745844	95925	-4e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	7	671810	158077879	80926	8e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	8	607667	27054364	15417	0.0031
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	8	27055118	27055854	2	-1.8957
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	8	27056310	145304484	65657	-0.0027
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	9	779932	140058573	67610	-9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	10	405240	135075077	80420	4e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	11	446120	133647740	76791	-1e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	12	760163	18615823	10075	0.0052
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	12	18617565	18617972	2	-2.4352
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	12	18618192	131671419	63448	-9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	13	18348806	47080133	18096	-9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	13	47081437	47081491	2	-1.937
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	13	47084178	70550823	11153	0.006
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	13	70555031	70556382	2	-2.0219
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	13	70557319	78941258	5531	0.0037
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	13	78944997	78945736	5	-1.9006
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	13	78950077	114005560	21539	0.004
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	14	19571208	105059083	49177	-0.0021
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	15	21238778	99701830	44255	0.0021
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	16	593460	87907437	40623	0.0018
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	17	933971	78510305	36785	0.0046
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	18	319586	75210228	42470	0.0018
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	19	235018	63570038	23857	-0.0013
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	20	403764	61690281	37060	0.0011
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	21	14269492	46503202	20470	0.0043
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	22	15803930	47717016	16828	0.0027
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	X	3167107	82151477	31357	0.0021
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	X	82152114	82158116	3	-1.8729
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	X	82158129	99074168	6749	-0.0052
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	X	99074697	99076317	4	-1.3489
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	X	99076839	113650046	6985	-0.0024
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	X	113656397	113656765	2	-2.3951
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C03_1344344	X	113657073	154558783	18360	0.0052
