Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	51598	16022502	8366	-0.0036
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	16026084	16026512	6	-2.2682
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	16026788	16686508	290	0.0063
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	16687581	17155662	183	-0.3302
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	17157507	72541504	33839	-0.004
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	72541524	72583736	45	1.2039
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	72584492	105814277	20927	0.0017
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	105814899	105823883	17	0.7975
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	105823898	110029023	2650	0.0021
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	110029038	110035933	10	-1.2248
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	110036078	112491849	1942	-0.0043
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	112497488	112498736	22	0.5405
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	112498764	146842179	6304	-0.0044
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	146842185	147509696	155	-0.561
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	147509865	150821800	1531	-0.0115
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	150822151	150853218	36	0.417
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	150857118	151028547	170	0.0564
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	151028563	151043379	38	0.3288
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	151045067	157133197	3589	-0.003
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	157135125	157136383	2	2.4232
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	157141442	167483561	7646	3e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	167500598	167508390	6	-2.203
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	167509025	194981496	18098	0.0015
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	194994473	195024782	39	-2.1874
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	195025897	195065266	33	-0.8438
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	195065287	195066128	7	-2.4242
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	195066322	195068610	12	-1.0907
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	195068625	246804070	35531	3e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	246815817	246875992	37	-0.6353
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	246885106	247191011	139	0.0544
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	2	2784	3798547	2673	-0.0028
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	2	3799127	3801696	2	-2.5912
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	2	3801840	34544573	21303	-9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	2	34552819	34590561	45	0.7792
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	2	34590667	127568491	54870	2e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	2	127573516	127574416	3	-2.0376
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	2	127575116	146580913	11456	0.0017
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	2	146580927	146583404	21	-2.0842
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	2	146594276	242738129	58796	0.0025
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	35345	199602	152	0.018
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	205022	207800	4	-3.3268
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	209877	16215560	12690	0.0016
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	16215633	16216183	5	-2.481
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	16216329	37952421	14647	-0.0032
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	37957112	37961887	16	-0.9688
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	37961932	46776821	5500	0.002
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	46776868	46824183	38	-0.7082
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	46824593	100419653	30376	-3e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	100420474	100432111	39	-0.7177
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	100433654	137501789	22676	-0.002
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	137505641	137508116	2	-2.9709
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	137521231	154691038	10579	-0.0019
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	154694900	154701579	6	-1.1614
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	154702382	163995786	5591	7e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	163995843	164011324	10	1.0374
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	164013009	164023184	9	-0.7854
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	164028410	164108689	48	0.646
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	164109266	192953696	18106	0.0022
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	192954034	192954999	2	-2.1906
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	192956917	194357441	972	0.005
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	194360596	194365597	20	-1.2957
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	194369129	199329968	2673	-0.001
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	199330300	199380515	18	-0.5495
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	2281	9832514	5775	1e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	9832726	9843364	29	-1.8953
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	9843706	55192643	27723	0
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	55196483	55200690	4	-1.5626
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	55202363	70130236	8992	-0.0027
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	70134706	70270740	71	-0.506
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	70273685	100901291	18502	-0.0018
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	100901960	100914386	5	1.3095
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	100915289	104435155	2058	-0.0069
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	104437549	104437551	3	-1.1814
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	104439553	104965020	365	0.0042
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	104971079	104971086	5	-1.2823
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	104971093	118132096	7965	9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	118132902	118141887	4	-1.8421
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	118144422	138311689	11502	-0.0047
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	138311870	138314422	16	-0.6496
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	138314571	162091333	14679	0.0053
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	162093056	162104358	31	-0.5913
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	162104369	172605921	6643	-4e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	172611459	172613863	7	1.3475
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	172614019	191261904	12458	4e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	5	68532	738748	308	0.0112
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	5	751371	826568	29	1.5973
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	5	832860	878307	27	0.9525
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	5	878653	12872313	9779	0.0038
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	5	12872375	12879650	8	1.0485
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	5	12886857	15772350	1967	-0.0096
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	5	15773075	15773597	9	-1.1337
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	5	15776346	46306865	18483	0
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	5	46307687	46309259	6	-2.6637
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	5	46313969	180307129	81623	0.0022
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	5	180311316	180375006	22	-0.6987
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	5	180375047	180722926	168	-0.0382
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	94661	29951413	21620	-0.0056
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	29952013	29958175	8	-1.9326
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	29958253	32717405	1230	0.0044
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	32732282	32734596	6	1.2031
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	32758590	34045977	800	0.023
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	34046721	34050683	7	-0.8145
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	34052564	55931252	14057	0.0046
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	55932411	55951619	12	-1.1612
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	55958837	65393663	3114	0.002
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	65404265	65405713	2	-2.4286
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	65407497	74648586	6140	0.0023
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	74648953	74658138	10	0.9861
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	74660283	77071668	1463	-0.001
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	77073620	77073646	3	-1.4027
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	77073713	79028553	1300	-2e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	79028807	79091904	104	-0.4174
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	79095953	103841522	15402	7e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	103844669	103868754	46	0.6435
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	103872163	157699483	34578	-5e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	157701252	157716064	2	-2.0576
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	157716982	170892930	9358	0.0086
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	52911	5903426	3055	0.0076
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	5906565	6005251	17	-0.5861
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	6005427	22401305	12938	0.0057
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	22401997	22403012	2	-2.3047
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	22405279	24001652	1067	0.0015
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	24006403	24006908	2	1.9343
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	24007342	54347867	21266	-0.0011
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	54353999	54354011	6	1.1384
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	54360982	70058374	6261	0.0089
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	70061186	70064077	2	-2.5255
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	70066179	125832792	32417	-0.0013
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	125832887	125840002	17	-0.8056
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	125841634	133435717	4675	-0.0108
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	133435735	133446174	26	0.6383
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	133446205	141409593	5178	0.0011
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	141416112	141436548	38	0.4899
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	141436652	142154515	454	-0.0026
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	142156294	142165914	29	0.735
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	142176424	154020828	7289	-0.0109
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	154024104	154030546	4	-2.5558
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	154031763	158810207	3209	0.0112
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	158810254	158819765	16	-0.7793
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	21254	584973	326	0.0067
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	585220	585875	6	0.4987
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	585892	585908	2	3.0032
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	591043	7225429	7471	0.0085
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	7237790	8124554	218	-0.4887
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	8129435	11932654	3203	0.0025
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	11972069	12464671	115	-0.2914
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	12466942	23458220	9221	-0.0067
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	23458253	23463756	5	-1.1297
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	23463816	23524915	66	0.036
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	23525033	23525867	4	-0.977
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	23526060	25031417	1063	-0.0103
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	25031487	25040167	21	0.8869
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	25040250	112363642	50860	0.0024
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	112363822	112364436	7	-2.3439
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	112369457	131917051	13023	2e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	131920881	131925765	7	-1.9069
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	131925796	146268959	9775	0.0011
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	9	36587	16894047	15227	-0.0081
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	9	16894080	16896359	2	-2.3612
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	9	16896556	28299878	8857	-0.0068
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	9	28300570	28301629	2	-1.7438
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	9	28302061	41723631	7067	-3e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	9	41832529	41887112	4	-1.7621
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	9	41933711	43412533	32	-0.1225
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	9	43445848	43740182	38	0.6319
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	9	44054868	44336923	44	-0.1709
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	9	44344908	44777523	39	0.6271
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	9	44780914	78260281	6251	0.001
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	9	78265472	78268233	3	-2.1747
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	9	78268493	140211215	41837	0.0026
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	10	62759	4230107	3507	-0.0032
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	10	4230722	4231572	4	-1.4848
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	10	4233998	17934982	11271	8e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	10	17967560	17989863	3	-2.4193
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	10	18011822	135356694	75727	0
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	11	188510	4926853	2463	0.0032
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	11	4926870	4932281	25	0.7352
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	11	4932833	10179361	3830	-0.0048
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	11	10182012	10185304	6	-1.0916
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	11	10189289	21152319	8434	0.0055
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	11	21152756	21153085	5	-1.0958
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	11	21155209	31349870	7012	6e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	11	31350844	31353656	2	-2.3697
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	11	31354783	55111788	12658	-0.0012
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	11	55112298	55209553	67	-0.458
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	11	55209585	134449982	52078	-0.0015
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	12	20703	44186092	28338	-9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	12	44190705	44195804	4	1.5662
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	12	44199559	87455237	26205	0
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	12	87455663	87456495	4	-1.4964
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	12	87456855	89006974	918	0.0011
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	12	89007478	89016205	9	-1.8486
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	12	89017688	132288262	29059	0.0014
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	13	17924949	68140256	32845	0.001
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	13	68146300	68166243	39	-0.7174
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	13	68167120	94775953	17434	0.0019
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	13	94784167	94797183	12	-1.0149
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	13	94798750	114126499	13563	-8e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	18072124	18502799	30	-0.2365
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	18504374	19492423	159	0.5446
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	19493212	19595673	77	-0.0161
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	19597130	19597234	2	-1.9387
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	19600106	20523213	680	0.0054
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	20524255	20530000	5	-1.0382
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	20532890	39678679	12072	-0.0026
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	39683673	39686670	2	-2.2926
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	39687916	73070876	21095	-0.0028
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	73076460	73090732	8	1.0929
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	73099653	105618359	20689	5e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	105618552	105632486	9	1.2342
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	105638145	105848388	102	-0.0584
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	105854089	105892781	12	-1.0836
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	105896961	106356482	304	0.0696
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	18276341	18506386	51	-0.0592
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	18507169	19438545	230	0.4781
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	19451059	19456767	3	2.0993
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	19456870	19535709	16	0.654
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	19537879	19781841	8	-0.4406
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	19786318	19864595	26	0.5841
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	19874434	19884565	7	-0.4697
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	19886365	20088838	81	0.6091
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	20224763	20304073	11	-0.4225
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	20306536	21010643	301	-0.9268
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	21029490	28173703	4339	0.0015
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	28185521	28566883	98	0.3531
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	28566988	36914169	5643	-0.0025
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	36914232	36920838	3	-2.1373
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	36923877	100286563	40889	-6e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	16	777	13966614	10635	-0.001
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	16	13976169	13987955	10	-1.1141
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	16	13993928	34324072	9761	0.004
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	16	34328205	34374420	24	0.5312
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	16	34374425	34374427	3	-0.5884
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	16	34374807	34625006	145	0.4992
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	16	34625497	54352715	6572	0.0024
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	16	54353890	54379945	22	-0.7678
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	16	54387058	76929109	14417	0.002
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	16	76929941	76940641	14	-1.9338
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	16	76942239	88815036	10553	6e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	17	526	17559615	10989	0.0017
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	17	17560300	17572733	10	-0.717
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	17	17574657	18299671	376	0.0049
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	17	18299674	18399997	25	-1.8064
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	17	18405311	31460645	6882	0.0033
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	17	31461241	31567456	40	-0.4359
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	17	31610407	31944721	69	0.0802
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	17	31945834	31950975	2	-1.8511
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	17	31951595	41719947	5104	0.004
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	17	41750187	42107479	48	-0.6224
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	17	42120174	76243458	20510	-5e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	17	76244388	76248774	2	-1.9516
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	17	76248895	78643088	957	0.0118
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	18	1543	1713388	1173	-0.0056
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	18	1715758	1828112	87	-1.0939
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	18	1831469	61353956	38522	-0.0016
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	18	61353975	61358237	19	1.3297
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	18	61358253	61872559	359	-0.0021
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	18	61878472	61879320	12	-1.9572
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	18	61883718	76116029	10381	1e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	19	41910	5457659	1588	-0.0136
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	19	5461239	5461653	3	-2.9431
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	19	5461700	63789666	27616	-9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	20	9305	62426597	42194	-0.0014
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	21	9758742	15906614	1621	-0.0051
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	21	15913991	15914179	5	-1.0461
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	21	15914564	27128979	8290	1e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	21	27129261	27129946	2	-1.864
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	21	27130339	46921385	14336	-8e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	22	14432528	14482348	8	0.8174
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	22	14482419	18358558	1940	0.0096
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	22	18364013	18368265	6	-1.0112
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	22	18368284	19280564	346	0.0373
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	22	19282909	19283319	2	-3.1801
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	22	19288301	49581321	21117	0.0043
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	X	108477	76270041	39924	0.004
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	X	76278683	76295047	2	-2.6953
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	X	76295049	76440325	15	-0.6298
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	X	76461534	81868537	2598	0.0047
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	X	81869708	81872035	2	1.7319
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	X	81875229	101922254	10924	-0.0036
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	X	101944310	102039353	37	0.5545
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	X	102046753	147779709	26873	-4e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	X	147780211	147786144	3	-1.7617
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	X	147786896	154835548	3785	0.0143
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	2710438	3065268	152	-2.9623
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	3066140	6167901	685	-2.605
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	6170498	6343866	79	-4.0426
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	6347367	8412852	1114	-3.0783
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	8413707	10433373	573	-3.4903
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	10436040	16780637	2367	-3.0377
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	16783449	17038883	97	-3.8359
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	17042729	17987401	508	-3.1071
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	17987968	19545599	741	-3.6582
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	19546238	22268551	1056	-3.1368
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	22268856	25776875	688	-3.6754
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	25846090	26129939	92	-2.9079
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	26130472	26699115	196	-3.8117
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	26699206	26731140	11	-5.4901
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	26731407	26833326	44	-3.5402
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	26847504	57427647	183	-2.8453
