Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	61735	16149915	8366	-0.0036
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	16153497	16153925	6	-2.2682
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	16154201	16813921	290	0.0063
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	16814994	17283075	183	-0.3302
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	17284920	72768916	33916	-0.004
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	72768936	72811148	45	1.2039
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	72811904	106012754	20918	0.0018
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	106013376	106022360	17	0.7975
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	106022375	110227500	2650	0.0021
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	110227515	110234410	10	-1.2248
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	110234555	112690326	1942	-0.0043
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	112695965	112697213	22	0.5405
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	112697241	148575555	6301	-0.0044
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	148575561	149243072	155	-0.561
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	149243241	152555176	1532	-0.0111
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	152555527	152586594	36	0.417
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	152590494	152761923	170	0.0564
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	152761939	152776755	38	0.3288
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	152778443	158866573	3588	-0.0031
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	158868501	158869759	2	2.4232
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	158874818	169216937	7646	3e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	169233974	169241766	6	-2.203
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	169242401	196714873	18098	0.0015
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	196727850	196758159	39	-2.1874
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	196759274	196798643	33	-0.8438
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	196798664	196799505	7	-2.4242
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	196799699	196801987	12	-1.0907
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	196802002	248737447	35528	3e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	248749194	248809369	38	-0.6107
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	1	248818483	249224388	139	0.0544
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	2	12784	3820672	2673	-0.0028
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	2	3821252	3823821	2	-2.5912
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	2	3823965	34691069	21301	-9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	2	34699315	34737057	45	0.7792
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	2	34737163	146864443	66317	4e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	2	146864457	146866934	21	-2.0842
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	2	146877806	243089456	58799	0.0025
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	60345	224602	152	0.018
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	230022	232800	4	-3.3268
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	234877	16240556	12689	0.0015
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	16240629	16241179	5	-2.481
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	16241325	37977417	14648	-0.0033
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	37982108	37986883	16	-0.9688
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	37986928	46801817	5500	0.002
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	46801864	46849179	38	-0.7082
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	46849589	98936963	30371	-3e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	98937784	98949421	39	-0.7177
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	98950964	136019099	22676	-0.002
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	136022951	136025426	2	-2.9709
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	136038541	153208348	10579	-0.0019
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	153212210	153218889	6	-1.1614
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	153219692	162513092	5590	7e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	162513149	162528630	10	1.0374
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	162530315	162540490	9	-0.7854
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	162545716	162625995	48	0.646
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	162626572	191471002	18107	0.0022
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	191471340	191472305	2	-2.1906
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	191474223	192874747	972	0.005
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	192877902	192882903	20	-1.2957
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	192886435	197845571	2673	-0.001
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	3	197845903	197896118	18	-0.5495
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	12281	10223416	5775	1e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	10223628	10234266	29	-1.8953
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	10234608	55497886	27721	0
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	55501726	55505933	4	-1.5626
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	55507606	70095647	8993	-0.0028
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	70100117	70236151	71	-0.506
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	70239096	100682268	18505	-0.0019
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	100682937	100695363	5	1.3095
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	100696266	104215706	2059	-0.007
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	104218100	104218102	3	-1.1814
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	104220104	104745571	365	0.0042
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	104751630	104751637	5	-1.2823
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	104751644	117912648	7965	9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	117913454	117922439	4	-1.8421
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	117924974	138092239	11503	-0.0047
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	138092420	138094972	16	-0.6496
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	138095121	161871883	14681	0.0053
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	161873606	161884908	31	-0.5913
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	161884919	172369346	6644	-4e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	172374884	172377288	7	1.3475
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	4	172377444	191027923	12457	4e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	5	15532	685748	307	0.0119
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	5	698371	773568	29	1.5973
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	5	779860	825307	27	0.9525
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	5	825653	12819313	9782	0.0038
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	5	12819375	12826650	8	1.0485
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	5	12833857	15719350	1967	-0.0096
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	5	15720075	15720597	9	-1.1337
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	5	15723346	46271108	18480	0
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	5	46271930	46273502	6	-2.6637
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	5	46278212	180374523	81625	0.0022
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	5	180378710	180442400	22	-0.6987
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	5	180442441	180790320	168	-0.0382
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	149661	771504	523	0.0444
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	771711	776878	4	-1.7826
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	779944	26737032	19633	-0.0057
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	26737438	26762387	16	-0.8972
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	26762572	26851798	39	-0.0618
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	26861038	26897548	3	-1.4961
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	26904759	29843434	1401	-0.0051
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	29844034	29850196	8	-1.9326
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	29850274	32622194	1232	0.0046
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	32624304	32626618	6	1.2031
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	32650612	33937999	798	0.0228
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	33938743	33942705	7	-0.8145
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	33944586	55823293	14058	0.0047
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	55824452	55843660	12	-1.1612
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	55850878	65336942	3115	0.002
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	65347544	65348992	2	-2.4286
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	65350776	74591858	6139	0.0021
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	74592225	74601410	10	0.9861
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	74603555	77014948	1463	-0.001
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	77016900	77016926	3	-1.4027
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	77016993	78971834	1299	-1e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	78972088	79035185	104	-0.4174
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	79039234	103734829	15401	7e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	103737976	103762061	46	0.6435
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	103765470	157779495	34584	-5e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	157781264	157796076	2	-2.0576
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	6	157796994	171051005	9358	0.0086
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	43355	5936900	3053	0.0077
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	5940039	6038725	17	-0.5861
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	6038901	22434780	12940	0.0057
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	22435472	22436487	2	-2.3047
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	22438754	24035127	1067	0.0015
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	24039878	24040383	2	1.9343
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	24040817	54380373	21262	-0.0011
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	54386505	54386517	6	1.1384
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	54393488	70420438	6262	0.0088
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	70423250	70426141	2	-2.5255
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	70428243	126045556	32422	-0.0013
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	126045651	126052766	17	-0.8056
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	126054398	133785177	4676	-0.0107
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	133785195	133795634	26	0.6383
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	133795665	141763124	5178	0.0011
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	141769643	141790079	38	0.4899
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	141790183	142474939	454	-0.0026
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	142476719	142486345	29	0.735
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	142486495	154389895	7288	-0.0109
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	154393171	154399613	4	-2.5558
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	154400830	159117446	3209	0.0112
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	7	159117493	159127004	16	-0.7793
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	31254	594973	326	0.0067
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	595220	595875	6	0.4987
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	595892	595908	2	3.0032
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	601043	7238019	7472	0.0085
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	7250380	8087144	218	-0.4887
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	8092025	11895245	3201	0.0024
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	11934660	12420300	116	-0.285
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	12422571	23402275	9221	-0.0067
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	23402308	23407811	5	-1.1297
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	23407871	23468970	66	0.036
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	23469088	23469922	4	-0.977
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	23470115	24975500	1063	-0.0103
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	24975570	24984250	21	0.8869
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	24984333	112294466	50864	0.0025
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	112294646	112295260	7	-2.3439
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	112300281	131847869	13025	3e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	131851699	131856583	7	-1.9069
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	8	131856614	146298155	9775	0.0011
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	9	46587	16904047	15231	-0.0081
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	9	16904080	16906359	2	-2.3612
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	9	16906556	28309878	8856	-0.0068
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	9	28310570	28311629	2	-1.7438
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	9	28312061	41733631	7072	-4e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	9	41842529	41897112	4	-1.7621
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	9	41943711	43472537	32	-0.1225
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	9	43505852	43800186	38	0.6319
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	9	44114872	44396927	44	-0.1709
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	9	44404912	44837527	39	0.6271
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	9	44840918	79070461	6253	9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	9	79075652	79078413	3	-2.1747
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	9	79078673	141091394	41842	0.0026
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	10	72759	4240107	3507	-0.0032
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	10	4240722	4241572	4	-1.4848
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	10	4243998	17894976	11271	8e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	10	17927554	17949857	3	-2.4193
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	10	17971816	135506704	75724	0
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	11	198510	4970277	2462	0.0031
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	11	4970294	4975705	25	0.7352
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	11	4976257	10222785	3830	-0.0048
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	11	10225436	10228728	6	-1.0916
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	11	10232713	21195743	8433	0.0055
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	11	21196180	21196509	5	-1.0958
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	11	21198633	31393294	7011	6e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	11	31394268	31397080	2	-2.3697
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	11	31398207	55355212	12657	-0.0012
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	11	55355722	55452977	67	-0.458
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	11	55453009	134944770	52072	-0.0016
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	12	150442	45899825	28334	-9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	12	45904438	45909537	4	1.5662
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	12	45913292	88931106	26204	-1e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	12	88931532	88932364	4	-1.4964
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	12	88932724	90482843	918	0.0011
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	12	90483347	90492074	9	-1.8486
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	12	90493557	133778189	29057	0.0014
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	13	19026949	69242255	32843	0.001
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	13	69248299	69268242	39	-0.7174
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	13	69269119	95977952	17433	0.0019
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	13	95986166	95999182	12	-1.0149
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	13	96000749	115108397	13563	-8e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	19002124	19432799	30	-0.2365
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	19434374	20422583	159	0.5446
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	20423372	20525833	77	-0.0161
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	20527290	20527394	2	-1.9387
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	20530266	21453373	680	0.0054
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	21454415	21460160	5	-1.0382
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	21463050	40608928	12070	-0.0025
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	40613922	40616919	2	-2.2926
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	40618165	106547314	41791	-9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	106547507	106561441	9	1.2342
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	106567100	106777343	102	-0.0584
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	106783044	106821736	12	-1.0836
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	14	106825916	107285437	304	0.0696
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	20016328	20246372	51	-0.0592
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	20247155	21173886	216	0.4702
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	21186400	21192108	3	2.0993
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	21192211	22363231	64	0.4767
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	22373070	22383201	7	-0.4697
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	22385001	22587474	81	0.6091
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	22673399	22752709	11	-0.4225
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	22755172	23459202	301	-0.9268
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	23478049	30386411	4340	0.0015
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	30398229	30779591	98	0.3531
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	30779696	39126877	5643	-0.0024
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	39126940	39133546	3	-2.1373
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	15	39136585	102469040	40885	-7e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	16	60777	14059113	10634	-0.001
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	16	14068668	14080454	10	-1.1141
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	16	14086427	34466571	9760	0.0042
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	16	34470704	34516919	24	0.5312
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	16	34516924	34516926	3	-0.5884
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	16	34517306	34767505	145	0.4992
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	16	34767996	55795214	6572	0.0024
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	16	55796389	55822444	22	-0.7678
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	16	55829557	78371608	14336	0.002
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	16	78372440	78383140	14	-1.9338
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	16	78384738	90287535	10556	3e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	17	526	17618890	10990	0.0018
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	17	17619575	17632008	10	-0.717
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	17	17633932	18358946	376	0.0049
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	17	18358949	18459272	25	-1.8064
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	17	18464586	34436532	6882	0.0033
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	17	34437128	34543343	40	-0.4359
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	17	34586294	34870608	69	0.0802
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	17	34871721	34876862	2	-1.8511
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	17	34877482	44364170	5102	0.004
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	17	44394412	44752300	48	-0.6224
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	17	44764994	78628863	20511	-5e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	17	78629793	78634179	2	-1.9516
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	17	78634300	81049726	957	0.0118
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	18	11543	1723388	1174	-0.0057
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	18	1725758	1838112	87	-1.0939
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	18	1841469	63202976	38519	-0.0016
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	18	63202995	63207257	18	1.3428
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	18	63207273	63721579	359	-0.0021
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	18	63727492	63728340	12	-1.9572
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	18	63732738	78015057	10381	1e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	19	90910	5506659	1588	-0.0136
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	19	5510239	5510653	3	-2.9431
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	19	5510700	59097854	27615	-9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	20	61305	62956153	42196	-0.0015
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	21	10736871	16984743	1621	-0.0051
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	21	16992120	16992308	5	-1.0461
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	21	16992693	28207108	8289	1e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	21	28207390	28208075	2	-1.864
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	21	28208468	48096957	14335	-8e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	22	16052528	16102348	8	0.8174
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	22	16102419	19978558	1940	0.0096
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	22	19984013	19988265	6	-1.0112
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	22	19988284	20950564	346	0.0373
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	22	20952909	20953319	2	-3.1801
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	22	20958301	51234455	21117	0.0043
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	X	168477	76353650	39933	0.0041
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	X	76362292	76378656	2	-2.6953
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	X	76378658	76523952	15	-0.6298
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	X	76545159	81981881	2599	0.0049
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	X	81983052	81985379	2	1.7319
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	X	81988573	102035598	10898	-0.0019
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	X	102057654	102152697	37	0.5545
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	X	102160097	147972016	26876	-4e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	X	147972518	147978455	3	-1.7617
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	X	147979205	155182354	3786	0.0144
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	2650438	2878395	112	-2.8393
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	2878640	2892421	7	-4.5742
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	2893230	5949434	685	-2.509
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	5949944	6424299	192	-3.5297
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	6426233	8352852	1073	-3.0467
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	8353707	9823373	573	-3.4903
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	9826040	18271243	2370	-3.0341
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	18274055	18529489	97	-3.8359
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	18533335	19570632	549	-3.1172
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	19571480	21086211	701	-3.6806
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	21086850	23859163	1057	-3.1351
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	23859468	27367487	688	-3.6754
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	27436702	27720551	92	-2.9079
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	27721084	28289727	196	-3.8117
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	28289818	28321752	11	-5.4901
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	28322019	28557248	87	-3.2564
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C05_1344326	Y	28557802	59018259	140	-2.8083
