Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	61735	16963313	8728	0.0045
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	16963545	17012741	31	0.4182
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	17012785	20329606	2287	0.0029
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	20329745	20334629	2	-1.8589
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	20334664	25583341	3071	-0.0098
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	25593128	25662212	31	-1.596
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	25663310	35091674	4943	-0.0016
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	35102654	35104491	20	-0.5321
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	35114268	55090200	11005	-0.0018
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	55093291	55094389	2	-2.3163
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	55096450	72768916	12756	0.0018
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	72768936	72817021	49	-0.7328
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	72818599	81888456	5765	-0.0021
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	81888602	81888605	2	1.969
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	81888667	104159384	14266	0.001
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	104163499	104303403	28	-0.7599
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	104303501	110227515	3594	0.007
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	110232974	110235032	12	0.7977
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	110236932	149036524	8325	0.0016
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	149040066	149205493	98	-0.7267
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	149208392	149248712	28	-0.217
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	149248727	149248841	2	1.9425
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	149249447	149578722	42	-0.3005
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	149617451	152555706	1482	0.0222
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	152555767	152579468	25	0.5647
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	152579621	152762008	182	0.0182
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	152762046	152768700	33	-0.3533
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	152773905	169216937	11265	1e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	169233974	169241766	6	-2.6249
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	1	169242401	249224388	54025	3e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	2	12784	33520158	23118	0.0118
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	2	33524956	33525407	3	-2.1998
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	2	33527168	34701394	914	0.007
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	2	34701583	34737163	44	0.7185
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	2	34737556	89999062	35830	0.0044
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	2	90001943	91704736	165	-0.7664
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	2	91727980	98154265	1023	-0.0099
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	2	98157272	98161710	3	-2.0165
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	2	98162189	106881633	5564	0.0035
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	2	106883229	106887255	9	0.7793
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	2	106887408	108440736	991	7e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	2	108446969	108480907	2	-1.9394
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	2	108492088	118315232	5251	0.0159
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	2	118316309	118321888	3	-1.4935
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	2	118322484	123479951	3286	0.0074
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	2	123481713	123482241	7	-0.9159
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	2	123483653	129638911	3885	0.0116
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	2	129638961	129640297	9	-0.911
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	2	129640315	130767665	865	0.0016
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	2	130768628	130874488	25	-0.4365
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	2	130874876	146864429	9554	0.0098
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	2	146864443	146878395	24	0.719
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	2	146878410	159958620	7772	0.0045
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	2	159960343	159960973	2	-2.2528
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	2	159963287	243089456	51172	0.0027
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	3	60345	6646543	5810	-0.0079
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	3	6651128	6652676	17	-0.8431
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	3	6653068	29433099	16064	0.0027
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	3	29437405	29438573	6	-1.3735
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	3	29439460	37977417	5671	-1e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	3	37982108	37986883	16	-0.8762
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	3	37986928	68746164	20074	7e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	3	68746259	68747413	14	-1.0518
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	3	68748758	75568549	4921	0.0016
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	3	75572549	75586805	6	-2.2165
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	3	75595181	162512739	49974	-9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	3	162513092	162626572	69	0.8922
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	3	162626603	174945912	7502	-0.001
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	3	174945927	174945947	2	2.1608
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	3	174946010	192877902	11616	0.0012
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	3	192877962	192882903	19	-1.2438
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	3	192886435	195422293	1484	0.0081
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	3	195429608	195535614	64	-0.3254
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	3	195549324	197896118	1144	-0.0083
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	12281	10209963	5780	-0.0061
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	10210113	10235268	41	0.4874
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	10236142	10392354	169	0.0297
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	10393154	10400668	15	-0.6118
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	10402718	34779054	16761	0.0053
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	34786500	34824725	38	-2.85
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	34829872	58049193	12516	-0.0019
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	58051648	58100571	40	0.6453
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	58102424	64705187	3993	-0.0058
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	64705199	64708223	18	0.6801
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	64708258	69372003	2875	0.0018
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	69374941	69537152	72	0.6862
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	69540025	70127652	323	-0.0223
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	70128412	70268869	73	0.2755
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	70271551	104745571	20964	-0.0011
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	104751630	104751637	5	1.0266
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	104751644	115173700	6284	0.0048
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	115175323	115179352	11	-0.8486
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	115179428	115182175	12	-2.1679
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	115184229	149486629	20327	0
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	149493193	149493502	3	-1.3078
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	149494154	161881208	7619	0.0019
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	161881337	161885033	14	0.5551
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	161885123	172987928	7051	0.0052
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	172989148	172989533	12	-1.6752
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	172995979	189221258	10906	-0.0042
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	189221360	189221375	2	-2.1763
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	4	189221424	191027923	1174	-0.0127
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	5	15532	685504	305	-0.0145
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	5	685748	809806	44	-0.7912
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	5	817850	12819313	9836	0.0042
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	5	12819375	12838533	11	-1.239
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	5	12849201	21376844	5470	-0.0018
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	5	21377839	21377853	2	-1.7673
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	5	21386066	27524452	3600	0.0088
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	5	27525390	27526020	10	-0.9626
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	5	27527479	57321646	16500	0.0016
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	5	57326027	57332275	21	-0.5094
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	5	57332291	82061410	14614	-0.0047
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	5	82063848	82064040	2	-2.6468
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	5	82067145	180790320	62302	-0.002
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	6	149661	227053	63	-0.0769
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	6	227183	227385	2	-2.1784
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	6	229169	29837188	21606	0.001
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	6	29837314	29849267	14	-0.8744
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	6	29850196	32593021	1225	0.0019
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	6	32593401	32602107	6	-1.3343
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	6	32602269	77429730	25969	0.0011
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	6	77436159	77452757	23	0.6037
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	6	77461073	78962889	977	0
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	6	78969065	79035185	111	-2.3985
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	6	79039234	103734829	15434	-0.0036
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	6	103737976	103762061	46	0.8622
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	6	103765470	110394906	4211	0
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	6	110396191	110413237	18	-1.0789
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	6	110415428	130042834	11891	-0.0035
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	6	130045454	130047867	3	-1.3006
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	6	130048450	171051005	27935	-4e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	7	43355	57534527	40332	-0.0014
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	7	57536111	57536638	3	-1.7785
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	7	57536709	101052486	21747	-0.0019
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	7	101059732	101059949	2	-2.2749
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	7	101062911	107216738	3581	-2e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	7	107217020	107217279	2	-1.4529
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	7	107217786	109433798	1480	-0.0093
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	7	109437092	109453910	35	0.4429
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	7	109453982	126046543	10022	-9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	7	126046600	126046876	3	1.205
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	7	126046877	133785177	4692	-0.0044
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	7	133785195	133790443	25	0.56
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	7	133795634	141000364	4707	-0.005
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	7	141002552	141004026	3	1.1697
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	7	141004466	141763124	484	-0.0113
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	7	141769643	141805542	48	-0.4342
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	7	141807886	143873377	1303	-0.0212
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	7	143873952	144002397	28	0.4668
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	7	144003667	150272366	3847	2e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	7	150278375	150278514	2	-2.1439
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	7	150280272	159127004	5822	0.0078
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	8	31254	7935855	8008	0.0025
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	8	7943182	7962459	8	-0.8816
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	8	7962597	12234251	3262	-0.0026
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	8	12234298	12247486	32	-0.6104
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	8	12260927	12646389	163	0.0527
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	8	12648728	12649178	2	-1.7346
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	8	12652105	15413447	2638	-0.0204
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	8	15423270	15433683	16	-1.2908
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	8	15440586	24972187	7624	-5e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	8	24974443	24984250	26	1.0812
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	8	24984333	39230659	8998	-0.0012
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	8	39235603	39352622	40	0.8505
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	8	39352687	39356389	2	-2.123
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	8	39356721	39362929	6	1.02
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	8	39362946	39386965	11	0.3743
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	8	39388299	40183797	585	-0.0201
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	8	40183799	40189511	33	-3.4828
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	8	40192910	57046313	7899	0.0055
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	8	57049921	57096018	21	0.6982
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	8	57099187	146298155	56262	-6e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	9	46587	13912875	12730	-9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	9	13913150	13913527	4	-1.499
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	9	13916759	44629223	18615	-2e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	9	44727859	44888127	40	0.5557
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	9	44899920	141091394	48222	0.0029
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	10	72759	2072415	1469	0.0038
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	10	2072581	2072753	3	-1.3485
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	10	2073407	3507303	1399	-2e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	10	3507739	3508004	2	-1.7611
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	10	3511957	24372305	16297	0.0019
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	10	24372757	24378054	13	0.9433
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	10	24378908	27222045	1985	-0.0065
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	10	27222320	27228439	13	-1.0177
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	10	27228452	58829695	17558	0.0045
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	10	58830309	58830612	2	-1.733
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	10	58834303	61358267	1825	-0.0023
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	10	61364115	61364911	5	-1.0928
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	10	61365074	67306079	4016	0.009
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	10	67306158	67322795	31	0.4425
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	10	67322926	70002108	1784	2e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	10	70002935	70004954	2	-2.0904
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	10	70004990	78252851	4997	0.0071
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	10	78257061	78257610	2	1.7349
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	10	78261267	108208785	19691	0.0021
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	10	108208955	108209416	2	-1.8656
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	10	108211485	135506704	19669	0.003
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	11	198510	4967396	2464	-0.0029
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	11	4967650	4976334	33	0.6519
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	11	4976371	5552167	594	-0.0194
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	11	5554588	5560909	4	1.0919
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	11	5561595	31393294	18735	0.0022
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	11	31394268	31397080	2	-2.7681
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	11	31398207	55374188	12703	0.0062
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	11	55374203	55442318	45	-0.5867
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	11	55444211	134944770	52224	0.003
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	12	150442	9630556	6169	0.0045
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	12	9633870	9713674	22	-1.8581
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	12	9714954	27645992	12390	-0.006
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	12	27647741	27651362	28	-0.8418
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	12	27657161	30235581	1875	0.0016
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	12	30239267	30243689	24	-0.4996
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	12	30243722	33301520	2264	-0.0053
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	12	33301534	33308360	25	0.5302
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	12	33308387	34250696	588	-0.0372
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	12	34256709	34264089	9	-1.1741
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	12	34275382	129228886	58270	0.002
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	12	129230513	129232545	7	-1.7429
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	12	129233988	133778189	3062	0.0235
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	13	19026949	23633131	2899	0.0017
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	13	23633148	23633515	5	-1.0294
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	13	23638195	38071135	10602	-3e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	13	38072036	38088330	17	0.6798
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	13	38088374	51545054	9090	4e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	13	51546911	51549198	2	2.4076
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	13	51549557	72476988	12413	-0.0016
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	13	72477555	72480556	4	1.4205
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	13	72480605	98527274	16886	0.0077
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	13	98530124	98531465	6	-1.0541
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	13	98533830	115108397	12129	0.0035
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	14	19002124	19438611	33	0.1121
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	14	19451076	19541714	6	-1.0072
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	14	19557041	19689317	9	0.3348
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	14	19693231	19697885	3	1.5059
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	14	19706758	21366417	859	0.0187
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	14	21371774	21393512	7	-1.1264
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	14	21398310	74006707	33283	-0.003
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	14	74006851	74020979	7	-1.8091
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	14	74029900	106751284	20842	0.0028
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	14	106753859	106753867	3	1.998
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	14	106754003	106783044	15	0.0456
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	14	106796025	106821736	11	0.6604
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	14	106825916	106900555	46	0.0364
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	14	106900648	106910595	13	0.8217
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	14	106910889	107285437	245	0.0196
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	15	20016328	76878362	34210	0.005
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	15	76891241	76891877	6	1.0285
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	15	76892004	76895775	16	0.6081
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	15	76902179	102469040	17607	0.0017
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	16	60777	90287535	52226	0.0054
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	17	526	7258027	4081	8e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	17	7265349	7265806	2	-2.1177
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	17	7266476	39421708	16813	0.0047
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	17	39423014	39429949	19	0.7049
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	17	39430157	39430450	4	2.5508
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	17	39430531	44162307	2502	0.0133
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	17	44162597	44435454	136	-0.4724
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	17	44441482	81049726	21567	0.0075
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	18	11543	63762300	40301	-9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	18	63767140	63767922	3	-2.7279
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	18	63775595	78015057	10350	6e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	19	90910	15239924	6247	0.0058
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	19	15240815	15246236	6	-0.974
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	19	15246479	35849061	10504	0.0032
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	19	35849171	35861669	25	-0.4586
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	19	35861779	42153326	3261	0.0156
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	19	42153372	42153457	2	-5.4477
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	19	42162939	59097854	9219	0.0166
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	20	61305	1560802	1194	0.0248
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	20	1560922	1590257	40	1.5567
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	20	1590455	23496724	17007	0.0039
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	20	23496874	23498207	2	1.974
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	20	23498531	52644868	16599	0.0069
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	20	52647808	52658651	38	-0.7859
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	20	52662574	62956153	7433	0.0027
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	21	10736871	48096957	24309	0.0017
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	22	16052528	21465026	2836	0.0047
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	22	21465050	21917153	55	0.4287
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	22	21917323	22749833	735	0.0173
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	22	22749990	22750128	2	1.6574
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	22	22750383	23458030	421	-0.0029
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	22	23467109	23467757	2	1.6865
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	22	23468609	24265473	508	0.0024
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	22	24265659	24330218	41	0.3145
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	22	24330269	25736672	899	-0.012
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	22	25736674	25736678	5	0.9063
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	22	25745901	39329593	9931	0.0028
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	22	39331346	39341492	10	-0.7823
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	22	39342599	51234455	8028	0.002
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	X	168477	62410541	33718	0.0039
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	X	62433552	62522282	31	0.5122
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	X	62522527	76399729	6290	0.0048
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	X	76400171	76545159	13	0.6276
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	X	76546512	89889990	7087	-0.0062
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	X	89895048	89911508	21	-1.0674
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	X	89911858	121881262	17520	-0.002
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	X	121881695	121897803	9	-1.0044
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	X	121899576	155182354	19672	0.0059
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	Y	2650438	6101425	871	-2.496
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	Y	6107901	6356305	107	-3.8946
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	Y	6366231	8361119	1099	-2.9906
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	Y	8361606	9759564	550	-3.4167
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	Y	9774614	19570247	3033	-3.0042
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	Y	19570632	21088297	706	-3.6378
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	Y	21088485	23859163	1053	-3.0626
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	Y	23859468	27315972	687	-3.6132
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	Y	27367487	27717920	90	-2.7909
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	Y	27718192	28457337	262	-3.7046
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C10_1344444	Y	28458648	59018259	175	-2.7031
