Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	1	3208470	50826595	25169	0.012
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	1	50826910	50826934	2	-2.7762
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	1	50827991	245880329	103372	0.0011
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	2	474222	242124735	130815	0.0032
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	3	526235	199023074	105965	-9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	4	1043934	112431655	61389	-0.0029
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	4	112432291	112436250	2	-2.7506
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	4	112437259	189836143	40984	-0.0021
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	5	967233	29718200	16871	-0.0032
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	5	29719956	29721683	4	-1.2036
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	5	29723782	40339478	6455	0.0014
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	5	40343736	40343856	2	-1.4819
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	5	40345756	112193676	35826	0.0013
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	5	112193850	112193893	2	-2.0965
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	5	112194008	112226764	53	-0.0139
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	5	112232795	112234091	2	-1.7121
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	5	112238243	180293075	40904	-0.0013
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	6	959281	170745844	96076	0.002
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	7	671810	158077879	81032	0.0021
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	8	607667	145304484	81225	-0.0023
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	9	779932	140058573	67730	-1e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	10	405240	135075077	80581	-0.0019
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	11	446120	42850429	26815	-0.0027
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	11	42856898	42859279	3	-1.337
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	11	42863390	129792099	47735	1e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	11	129798055	129799104	2	-1.8257
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	11	129799146	133647740	2382	-0.0128
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	12	760163	18615823	10080	0.0058
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	12	18617565	18617972	2	1.6391
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	12	18618192	131671419	63555	-6e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	13	18348806	106055160	51571	0.0029
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	13	106055238	106057525	5	-1.2422
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	13	106057532	106180636	90	-0.0278
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	13	106182239	106182711	2	-1.42
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	13	106183236	114005560	4728	0.0036
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	14	19571208	105059083	49258	0.0031
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	15	21238778	99701830	44330	3e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	16	593460	22702230	9492	-0.0027
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	16	22702240	22705353	3	-1.2852
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	16	22706496	87907437	31190	-0.0016
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	17	933971	78510305	36848	0.0088
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	18	319586	75210228	42524	-0.0019
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	19	235018	63570038	23876	0.0188
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	20	403764	61690281	37126	-4e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	21	14269492	46503202	20501	0.0066
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	22	15803930	26995935	4057	-0.0013
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	22	26996961	26997046	2	2.1944
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	22	26998394	47717016	12797	0.0151
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C11_1344410	X	3167107	154558783	63588	0.0025
