Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	1	3218610	247813706	128578	0.0022
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	2	484222	108382881	56880	0.0063
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	2	108382934	108388820	4	-1.886
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	2	108389602	159785940	26550	0.0054
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	2	159787453	159787793	2	-3.9234
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	2	159787854	242011688	47097	0.0062
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	2	242014056	242014161	2	-1.6741
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	2	242016889	242476062	264	0.0312
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	3	2212571	197538677	105938	0.0021
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	4	1053934	188763651	102343	0.0023
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	5	914233	180360469	100088	5e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	6	1014281	170903919	96064	-0.0019
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	7	705284	158385118	81018	0.0015
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	8	617667	145232496	81203	0.001
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	9	789932	91426159	37331	0.0012
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	9	91429474	91437942	9	-0.972
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	9	91440590	140938752	30370	0.0031
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	10	415240	135225087	80565	9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	11	456120	74359066	38788	0.0021
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	11	74364561	74364566	2	-2.1063
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	11	74364730	134142530	38109	0.0056
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	12	889902	133161346	73609	-0.0017
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	13	19450806	114987458	56393	0.0049
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	14	20501368	105988038	49247	-8e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	15	23687685	101884307	44312	0.0027
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	16	653459	89379936	40606	-6e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	17	987221	80917016	36836	-0.0025
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	18	329586	77109240	42516	5e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	19	284018	21547023	7792	-4e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	19	21551852	21554550	2	-2.1259
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	19	21554992	58878226	16082	-0.0035
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	20	455764	62219837	37131	-5e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	21	15347621	47678774	20495	-0.0053
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	22	17423930	48766824	16428	0.0049
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	22	48766897	48766911	2	-1.8841
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	22	48768196	49331012	416	0.0412
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_C12_1344388	X	3157107	154905589	63578	0.0025
