Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	3218610	9158997	3553	0.1957
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	9159112	9708344	212	0.7753
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	9713500	11480820	819	0.1696
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	11481648	16407320	2483	0.6813
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	16408804	16498048	43	1.1673
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	16506027	16556709	28	1.5448
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	16561525	24712583	4530	0.6004
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	24712722	24917516	110	0.163
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	24917543	36497687	5566	0.5634
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	36499342	37060560	273	0.8644
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	37064497	41756048	2486	0.5501
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	41757057	41774354	12	1.3564
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	41775255	41849886	53	0.5073
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	41850182	41886293	29	1.0763
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	41891547	70924375	18033	0.5635
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	70924781	70927078	3	-1.718
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	70927261	109151961	22313	0.5296
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	109152356	109156284	3	-1.1328
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	109156879	155124016	9428	0.5377
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	155130391	155283425	70	1.1102
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	155285052	164755528	5892	0.5137
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	164757557	165642867	841	0.8338
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	165643659	167564641	1408	0.5003
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	167564661	167572161	4	-0.7706
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	167572558	193055525	15676	0.4788
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	193055796	193101793	22	-0.03
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	193101909	242641923	32201	0.4726
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	242643456	242646481	2	-1.5382
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	242650953	247810288	2484	0.4468
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	1	247812431	247813706	2	1.0689
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	484222	1917604	184	-0.0271
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	1917716	4048065	1398	0.383
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	4050540	4110558	48	-0.041
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	4114156	38289643	20499	0.3668
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	38290916	38366378	68	-0.5149
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	38367083	65499026	15385	0.3468
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	65500019	66146933	505	0.9046
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	66148290	68076484	1393	0.403
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	68076780	68405160	184	0.9407
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	68406603	69610104	692	0.3582
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	69610582	69740091	64	0.9291
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	69744840	80051097	5405	0.4097
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	80051975	80267295	198	0.062
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	80270722	85824468	3096	0.4084
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	85833832	86526127	302	0.8953
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	86532962	113836444	9745	0.4253
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	113837416	114478878	230	0.9596
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	114480709	128534515	7147	0.5776
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	128543157	128691414	72	1.0377
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	128695163	141761965	6461	0.5421
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	141764164	141833787	54	-0.1937
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	141838279	142055120	129	-0.5505
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	142055133	158929724	9616	0.2821
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	158940265	159444904	299	1.1949
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	159445757	159785940	243	0.3731
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	159787453	159787793	2	-2.1851
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	159787854	204046233	24103	0.3033
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	204048392	204501041	207	0.6007
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	2	204503976	242476062	23030	0.3212
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	3	2212571	37913396	21152	-0.2742
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	3	37914016	38401677	252	-0.7004
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	3	38404472	46906094	4944	-0.2729
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	3	46911476	46952260	19	0.2714
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	3	46959693	116212412	36569	-0.128
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	3	116215739	116303893	72	-0.605
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	3	116303907	116416357	49	-1.4513
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	3	116419034	116421583	2	0.0126
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	3	116421782	116441738	18	-2.9317
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	3	116442326	116510683	92	-4.9451
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	3	116511163	116673033	133	-3.0475
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	3	116673804	116752656	59	-1.1546
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	3	116753539	116765228	10	-2.0767
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	3	116765287	116812321	45	-1.2834
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	3	116819115	116899786	80	-0.4506
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	3	116899849	116964196	43	0.0303
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	3	116966977	197538677	42263	0.3761
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	4	1053934	13046311	6795	-0.2514
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	4	13049300	13098267	58	-0.9403
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	4	13101134	16537957	2477	-0.2451
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	4	16540684	16540720	2	-2.8128
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	4	16541432	18737011	1503	-0.2402
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	4	18740673	18833254	50	0.1203
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	4	18833547	23971604	3219	-0.246
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	4	23973910	30296596	4020	-1.0689
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	4	30305093	30323974	15	0.0757
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	4	30328979	46654610	8975	-1.0682
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	4	46654922	94624357	24167	-0.331
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	4	94624474	94666363	15	0.3501
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	4	94667301	110962547	9083	-0.344
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	4	110962712	110964362	3	-2.1933
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	4	110965127	160522849	27095	-0.34
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	4	160525462	160630642	51	0.461
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	4	160637514	180980876	10864	-0.3576
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	4	180987409	181130509	119	0.2621
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	4	181130538	182084889	340	-0.2896
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	4	182089679	182159038	54	-1.4226
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	4	182159136	182231482	65	-4.9238
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	4	182231885	182376357	108	-1.1018
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	4	182380444	186863867	1856	-0.3278
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	4	186865321	186866070	2	-2.5179
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	4	186867081	188763651	1087	-0.3108
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	5	914233	9667798	6295	-0.3835
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	5	9668866	9672416	2	-2.4704
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	5	9672439	33359497	13008	-0.4042
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	5	33362393	33364684	2	-2.7918
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	5	33367310	92650860	29755	-0.4171
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	5	92653593	93136514	194	0.1038
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	5	93137955	97523873	2378	-0.2026
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	5	97524353	97564080	26	0.5168
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	5	97586298	127706046	16426	-0.2204
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	5	127706353	127956351	160	-1.2253
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	5	127957750	146982944	10985	-0.3487
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	5	147006877	150582239	2346	-9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	5	150582456	150859551	186	-0.3911
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	5	150863297	151153454	224	-0.0575
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	5	151154743	180360469	17854	-0.4604
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	6	1014281	12953219	8528	0.109
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	6	12954407	13585406	518	0.4887
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	6	13589873	89717261	39773	0.1119
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	6	89717519	90415327	428	0.4425
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	6	90416006	97194494	3420	0.1156
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	6	97201926	97202744	2	-1.4978
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	6	97204248	98552535	722	0.0744
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	6	98557364	98938975	203	-0.4428
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	6	98939225	119629428	11810	0.0768
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	6	119630177	119895225	176	-0.7165
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	6	119904789	119913131	4	-2.7526
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	6	119915003	119969118	20	-1.6354
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	6	119984206	150371769	18522	0.0031
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	6	150376318	150520315	88	0.7835
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	6	150521501	170903919	11784	0.0127
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	7	705284	107479374	54273	0.2036
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	7	107486902	113555895	2896	-0.4615
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	7	113562026	128726479	8166	0.0437
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	7	128742164	128885288	79	0.4886
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	7	128885694	148820242	10854	0.0609
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	7	148834287	148966372	88	0.8089
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	7	148970199	150340211	512	0.1052
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	7	150340795	150341441	2	-2.1282
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	7	150341718	158385118	4110	0.1321
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	8	617667	41947814	24087	0.5364
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	8	41951085	41994151	24	-0.4137
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	8	42000983	86241237	22436	0.5154
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	8	86241688	86246915	2	-2.0915
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	8	86247521	90113916	1907	0.4796
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	8	90113946	90323764	162	0.1127
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	8	90326975	100834614	6071	0.4964
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	8	100836091	100844026	3	-0.9115
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	8	100847815	145232496	26510	0.5006
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	9	789932	852898	65	-0.3818
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	9	853225	871887	18	-1.1746
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	9	872364	28166400	17168	-0.4447
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	9	28356131	28543418	129	-1.4952
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	9	28543775	97536765	23475	-0.4138
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	9	97544820	97881428	227	-1.322
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	9	97886456	97888730	3	-4.4971
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	9	97889038	98287167	369	-1.2354
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	9	98289493	124266844	17328	-0.4034
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	9	124267879	124438732	98	0.5931
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	9	124441008	136767494	7131	-0.4006
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	9	136788539	137389953	211	0.1341
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	9	137391780	140938752	1254	-0.3981
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	10	415240	45850626	27858	0.1532
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	10	45855990	122476588	44641	-0.3966
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	10	122476771	123486601	975	0.2153
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	10	123491668	135225087	6892	-0.3569
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	11	456120	2430597	579	-0.3775
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	11	2440989	3047462	287	0.1116
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	11	3054873	27752445	16596	-0.3946
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	11	27752763	28076059	192	0.1639
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	11	28079859	47274431	11690	-0.3918
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	11	47275064	47520344	87	-1.2688
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	11	47522733	64592908	5275	-0.419
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	11	65670510	68631240	997	0.4118
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	11	68631704	68633944	4	-1.2465
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	11	68636670	102377269	20074	0.4241
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	11	102377428	102512067	116	0.7226
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	11	102512086	106506140	2329	0.414
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	11	106506599	106507197	2	-1.7161
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	11	106511123	118212531	7650	0.4346
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	11	118222184	118392868	212	0.9605
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	11	118393023	119003241	288	0.6396
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	11	119003569	119569832	312	0.0075
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	11	119572865	119573389	2	-3.1324
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	11	119575724	134142530	10066	0.0272
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	12	889902	39583851	19642	0.434
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	12	39584360	39591408	2	-1.4223
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	12	39591946	50024926	5656	0.4229
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	12	50031682	50130364	39	0.8171
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	12	50133611	50507073	210	0.4215
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	12	50507815	51337669	384	0.8713
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	12	51342851	53672598	1304	0.4347
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	12	53675663	53811305	46	0.797
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	12	53822484	56448340	1398	-0.397
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	12	56449618	56759927	173	0.1199
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	12	56765506	119313572	38137	-0.4024
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	12	119316699	119403769	66	0.1936
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	12	119411173	121110006	926	-0.4
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	12	121112744	121913056	468	-1.2918
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	12	121914242	121914808	2	-6.0883
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	12	121917890	123337380	522	-1.2492
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	12	123347609	133161346	4509	-0.3789
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	13	19450806	114987458	56370	0.3597
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	14	20501368	28379120	3746	-0.4126
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	14	28379174	28384940	2	-3.7899
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	14	28387693	35070371	4137	-0.4065
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	14	35070729	73942658	21835	0.1289
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	14	73943191	74091722	50	0.6325
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	14	74095147	102857698	18268	0.1297
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	14	102862759	103321426	211	0.4881
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	14	103325915	103439879	67	0.9126
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	14	103440282	105988038	877	0.1335
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	15	23687685	94748653	39832	-0.378
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	15	94751061	94755504	6	-2.4074
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	15	94755797	101884307	4338	-0.4121
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	16	653459	20153409	8788	-0.3753
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	16	20153473	20154879	2	-3.5737
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	16	20154946	56958801	11857	-0.3617
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	16	56963322	57387790	241	0.1281
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	16	57401307	79255074	12931	-1.2624
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	16	79281581	79446163	145	-5.0813
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	16	79446528	86522247	5015	-1.3683
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	16	86522437	86524611	10	-3.4376
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	16	86524636	89379936	1218	-1.3348
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	17	987221	4411505	1491	0.1453
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	17	4424159	27095485	8911	-0.3638
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	17	27104160	27271839	69	0.4738
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	17	27281666	36410733	4013	-0.3886
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	17	36418542	36820699	187	0.1807
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	17	36821045	37610123	355	-0.4059
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	17	37614014	38400674	346	0.0999
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	17	38408331	45885756	2908	-0.4024
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	17	45887951	45904163	6	-1.5659
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	17	45904665	48032005	1064	-0.3884
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	17	48033906	48173887	90	0.5409
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	17	48176043	73579069	14339	-0.318
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	17	73579363	73933008	121	0.1614
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	17	73935543	77448631	1600	-0.3338
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	17	77449055	80917016	1262	0.1654
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	18	329586	55560359	30840	-0.4155
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	18	55566541	56220081	410	0.1197
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	18	56224710	57177575	671	0.8057
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	18	57182078	77109240	10473	0.0981
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	19	284018	4403017	973	-0.6255
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	19	4673514	13218318	3568	4e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	19	13218777	13356434	47	0.7052
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	19	13361550	15594458	1106	0.0341
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	19	15595143	15848014	114	0.331
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	19	15848046	18371439	1190	0.0093
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	19	18375659	18640717	96	0.447
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	19	18644077	18908516	92	0.0148
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	19	18919944	19263761	155	0.429
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	19	19266701	19797154	233	0.0171
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	19	19806398	24045852	1355	0.4836
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	19	24045922	31482775	2431	0.8236
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	19	31483014	58878226	12505	0.4342
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	20	455764	14380508	8787	0.1774
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	20	14381049	14691122	138	-0.3995
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	20	15165524	33696047	9656	0.1607
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	20	33699435	33703607	8	0.5469
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	20	33705072	33832585	76	0.8806
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	20	33835773	35777066	910	0.4949
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	20	35777675	36699690	562	1.0899
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	20	36700221	36824464	72	0.5582
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	20	36830133	36976119	96	1.042
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	20	36976703	62219837	16809	0.5277
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	21	15347621	47678774	20441	-0.399
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	22	17423930	27337886	2888	-0.3655
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	22	27338123	27338819	2	-2.245
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	22	27338951	40872284	8324	-0.3666
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	22	40873576	41176563	142	0.1504
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	22	41183069	46230899	3193	-0.3713
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	22	46235461	46604102	126	0.5279
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	22	46609464	49331012	2095	-0.3818
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	X	3157107	10455285	1774	0.0388
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	X	10461190	10485160	22	-1.245
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	X	10487987	10547589	42	0.0152
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	X	10549934	10724745	104	0.6417
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	X	10725154	31281003	10606	0.0341
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	X	31281792	31312121	12	-1.0137
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	X	31312288	31314565	3	-2.6193
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	X	31315733	31563462	175	-0.8917
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	X	31567249	32740960	798	-0.0126
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	X	32741924	32966821	178	-3.6542
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	X	34033463	112273538	30510	0.0131
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	X	112283521	112421331	91	0.9267
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	X	112425583	127090335	7005	-0.0068
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	X	127101963	127304871	56	0.7741
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_E01_1344400	X	127429346	154905589	11996	-0.0037
