Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	61735	1628826	228	0.0631
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	1642103	1672603	14	0.6639
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	1687587	16803776	8417	0.0057
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	16804341	17012456	75	0.3945
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	17012741	17017078	7	-0.2709
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	17017530	17262247	103	0.42
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	17276241	72768916	33907	-0.002
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	72768936	72811148	45	1.1545
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	72811904	90555907	11575	-0.0038
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	90556150	90559712	5	-1.9618
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	90560093	110178212	11966	-0.0029
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	110181305	110244998	50	0.3842
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	110246126	144842558	7154	-0.0022
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	144849539	144868360	5	1.8204
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	144869084	148870937	1110	0.0313
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	148893345	149024808	15	0.7018
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	149036524	149246030	120	1.0927
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	149246275	149421517	39	0.663
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	149422108	149645033	17	0.0816
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	149659890	149758024	21	0.5476
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	149758041	152555527	1450	-0.003
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	152555706	152586540	33	-1.7786
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	152586576	152759678	171	-0.0088
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	152761923	152768700	37	-0.4006
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	152773905	169216937	11224	-4e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	169233974	169241766	6	-2.4063
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	169242401	194448234	16639	-0.0012
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	194451411	194455018	2	-2.4162
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	194457016	196758159	1484	-0.0021
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	196759274	196791043	31	-0.6517
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	196798565	196823317	28	-1.3632
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	196823613	196885685	55	-4.2755
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	196886709	196916359	12	-1.3554
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	196916799	210071062	8679	-0.0072
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	210081613	210083984	3	-2.8736
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	210086552	245627601	24727	-0.0053
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	245636410	245646904	12	-1.0483
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	1	245649651	249224388	2184	-0.0028
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	2	12784	243089456	149084	-3e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	3	60345	87979	23	0.4649
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	3	94169	6645601	5771	-0.007
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	3	6646543	6655078	25	-0.7773
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	3	6655248	23979303	11954	0.0035
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	3	23981429	23982328	2	-2.927
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	3	23982330	46793377	15207	0.0052
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	3	46801817	46849589	40	-0.8946
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	3	46859479	47399911	240	0.0075
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	3	47400331	47405451	3	-1.387
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	3	47409212	68746164	14226	0.0043
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	3	68746259	68747413	14	-1.2978
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	3	68748758	128381249	33886	-2e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	3	128384523	128412331	15	1.0035
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	3	128414161	186363031	35210	0.001
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	3	186363099	186364046	2	-3.4686
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	3	186365950	192874747	4758	-0.0093
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	3	192877902	192886458	22	0.5405
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	3	192886503	197896118	2689	0.0138
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	4	12281	10210390	5768	0.0149
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	4	10214160	10228927	9	-1.024
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	4	10229117	10231498	20	-2.5035
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	4	10234214	26148459	11580	-8e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	4	26150271	26167227	21	0.6831
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	4	26172715	26288818	66	-0.0024
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	4	26291985	26294776	3	-1.4798
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	4	26295174	34779054	5223	1e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	4	34786500	34821340	35	-0.8054
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	4	34824183	40700573	3878	-0.0018
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	4	40704011	40704192	3	-2.4155
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	4	40704687	64688251	12605	0.0029
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	4	64688718	64708258	35	-0.3682
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	4	64716431	69226848	2843	0.0025
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	4	69244434	69256759	4	-1.5058
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	4	69256760	69372003	25	0.1073
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	4	69374941	69489335	66	-1.7277
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	4	69505115	172369346	62149	7e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	4	172374884	172377776	11	1.2839
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	4	172380371	191027923	12445	0.006
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	5	15532	698505	310	0.0578
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	5	717379	833628	55	0.3721
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	5	852566	12800889	9787	0.0015
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	5	12815780	12849201	15	-1.1921
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	5	12857133	57329530	25513	0.0032
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	5	57329583	57338357	28	-0.6373
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	5	57340073	103860373	26701	-0.0036
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	5	103860481	103860604	3	2.8473
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	5	103861049	177198449	47999	2e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	5	177227551	177232605	3	2.3545
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	5	177254965	180790320	1989	0.0167
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	6	149661	253861	99	0.0243
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	6	254267	294837	25	-0.7203
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	6	302306	29837188	21463	-0.0017
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	6	29837314	29874642	20	0.9056
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	6	29874709	29896659	9	-1.1968
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	6	29898897	32586908	1201	0.0038
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	6	32587457	32626618	22	-0.9957
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	6	32650612	53931151	13645	-0.0012
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	6	53931230	53931855	6	1.2738
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	6	53935348	70173296	7603	0.0051
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	6	70178460	70182136	3	-1.6381
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	6	70186272	74592225	2850	-0.0168
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	6	74592457	74601410	9	-2.6222
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	6	74603555	77441442	1762	0.0021
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	6	77441495	77452757	14	-0.5741
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	6	77461073	78962889	975	-5e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	6	78969065	79035185	111	-0.4224
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	6	79039234	171051005	59355	-1e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	7	43355	126045556	76987	0.0034
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	7	126045651	126046876	11	-1.5546
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	7	126046877	142474939	10378	-7e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	7	142476719	142486045	27	0.7015
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	7	142486115	159127004	10510	0.0017
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	8	31254	3784187	3411	0.0084
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	8	3787083	3789998	21	-0.6802
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	8	3790037	12001123	7787	-0.0053
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	8	12034307	12390771	95	0.3061
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	8	12403053	40065654	19902	-0.0021
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	8	40066283	40069791	2	-3.0974
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	8	40071269	65765604	13594	-0.0054
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	8	65765940	65768466	2	-2.3566
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	8	65770668	112294466	27719	-0.0051
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	8	112294646	112295260	7	-2.4152
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	8	112300281	143222202	21719	-0.0035
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	8	143224644	143225883	2	-2.0535
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	8	143233571	146298155	1061	0.0533
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	9	46587	43315974	31178	-0.0051
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	9	43472537	43790346	38	-1.2592
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	9	43800186	89151028	13449	0.0026
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	9	89155447	89156063	2	2.2128
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	9	89156866	90522594	1164	-0.0102
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	9	90554151	90554219	2	-2.2273
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	9	90557957	141091394	33531	0.001
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	10	72759	24375263	19104	-0.0066
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	10	24377674	24378054	11	1.0446
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	10	24378908	135506704	71346	-3e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	11	198510	23629273	16577	-0.005
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	11	23629290	23631609	3	-1.9668
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	11	23638994	49699567	17052	-0.0012
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	11	49701318	49757671	22	-0.6328
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	11	49757767	51176743	380	0.008
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	11	51183575	51183906	3	-3.1482
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	11	51192870	55374048	380	-0.0066
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	11	55374188	55442318	46	0.3936
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	11	55444211	81498805	14540	-0.0026
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	11	81503468	81517158	11	-0.9229
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	11	81522632	134944770	37521	-0.0024
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	12	150442	9633870	6152	0.0038
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	12	9637909	9713674	21	-1.7646
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	12	9714954	11220827	1041	-0.0069
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	12	11222368	11241532	10	-1.4677
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	12	11251874	133778189	77273	6e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	13	19026949	20121459	566	0.0079
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	13	20123895	20123910	2	-2.5344
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	13	20124501	23629187	2316	0.0032
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	13	23629210	23633515	13	-2.2538
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	13	23638195	106376216	54824	-0.0026
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	13	106376423	106378194	2	-5.6457
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	13	106379747	115108397	6113	0.0016
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	14	19002124	40979116	13277	-1e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	14	40979577	40980503	4	-2.6026
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	14	40980813	74001123	20819	-0.005
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	14	74006707	74029900	9	1.8935
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	14	74029915	106295768	20575	0.0013
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	14	106302997	106329229	16	-0.5258
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	14	106342317	106460902	38	3e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	14	106479675	106479941	2	2.2518
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	14	106482128	106530364	21	-0.0238
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	14	106530687	106547314	7	-1.019
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	14	106547507	106561441	9	-2.5245
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	14	106567100	106715489	67	-0.9354
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	14	106717356	106740774	13	-1.6829
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	14	106746725	106802053	30	-0.9141
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	14	106815943	106868554	31	-0.1253
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	14	106872062	106918108	53	-0.6098
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	14	106918649	107285437	224	0.05
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	15	20016328	20843562	159	-0.0235
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	15	20847933	21929862	142	-0.455
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	15	21930553	30730310	4855	0.0081
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	15	30730703	30900878	25	-0.4829
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	15	30913587	30981045	23	-1.0094
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	15	31001080	31975260	663	-0.0106
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	15	31981961	32444055	358	0.618
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	15	32460887	56790880	15207	0.007
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	15	56790907	56800977	20	-0.7986
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	15	56801623	76878362	12656	4e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	15	76891241	76895775	22	0.7425
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	15	76902179	97808409	14146	-0.003
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	15	97817792	97832187	11	-3.1388
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	15	97833649	101936072	3052	-0.009
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	15	101936157	101936238	4	-2.076
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	15	101936388	102469040	340	-0.0183
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	16	60777	19944363	13419	0.0026
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	16	19945650	19967362	29	-0.8751
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	16	19970254	22625584	1303	0.0062
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	16	22625602	22710742	58	-0.378
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	16	22712979	32124331	5138	-0.0034
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	16	32146886	32588622	69	-0.3023
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	16	32588901	32588906	4	-3.1688
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	16	32588909	32655523	26	-0.5305
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	16	32743289	33375884	63	-0.0659
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	16	33380766	33710780	90	-0.5251
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	16	33716956	78371608	21292	-0.0044
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	16	78372440	78384738	15	-1.8916
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	16	78384765	90287535	10551	0.0076
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	17	526	2311629	1150	0.0088
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	17	2312354	2312374	4	1.3592
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	17	2316528	7258027	2916	0.0047
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	17	7265349	7265806	2	-1.8314
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	17	7266476	18355392	7299	-0.0042
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	17	18358946	18453437	25	-1.5356
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	17	18459272	26779053	2322	0.0128
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	17	26781341	26782319	2	-2.0713
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	17	26789271	44214166	9680	-9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	17	44215364	44352872	83	-0.4499
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	17	44353885	44428681	11	-0.1367
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	17	44429320	44752283	40	0.5224
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	17	44752300	81049726	21448	0.0014
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	18	11543	6478504	4563	0.0059
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	18	6480069	6482886	3	-1.9634
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	18	6483099	12212957	4272	0.0072
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	18	12218708	12228772	4	1.2636
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	18	12238863	38258727	13856	0.0034
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	18	38260420	38260480	5	-0.9571
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	18	38260490	38265389	14	-2.5058
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	18	38269498	40051678	1207	-0.0086
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	18	40056569	40057471	24	-0.7132
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	18	40057767	69163904	20109	5e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	18	69168135	69178484	14	-1.0147
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	18	69181285	78015057	6436	-0.0082
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	19	90910	114299	3	-1.7328
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	19	232496	59097854	29186	0.0038
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	20	61305	1571272	1213	0.006
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	20	1571325	1598336	29	-0.5159
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	20	1599002	15301374	10305	-0.0044
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	20	15301902	15302374	3	-2.583
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	20	15305258	29420553	8360	6e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	20	29428523	29505830	20	-0.6783
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	20	29505893	59111045	20047	-0.0021
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	20	59113709	59122693	7	-1.1939
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	20	59128381	62956153	2170	0.005
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	21	10736871	21644193	4859	5e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	21	21644278	21662677	14	-0.7449
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	21	21663011	48096957	19364	9e-04
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	22	16052528	24344422	4603	0.0332
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	22	24350529	24396814	19	-2.0109
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	22	24401529	51234455	18790	0.0046
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	X	168477	155182354	84103	0.0019
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	Y	2650438	6101425	870	-2.6065
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	Y	6107901	6344503	106	-4.0879
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	Y	6356305	8352852	1095	-3.1252
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	Y	8353707	9759564	554	-3.665
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	Y	9774614	15590276	951	-3.0621
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	Y	15590342	15594523	3	-7.5522
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	Y	15594889	19570247	2080	-3.1728
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	Y	19570632	21025062	675	-3.7591
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	Y	21028957	23859163	1084	-3.2482
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	Y	23859468	26218232	513	-3.744
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	Y	26222820	26408766	43	-2.9865
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	Y	26409789	26412603	3	-6.0675
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	Y	26417092	26598702	40	-2.7455
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	Y	26604818	27436702	90	-4.3332
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	Y	27444915	27721084	92	-2.923
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	Y	27721117	28457337	257	-3.8636
LEGIT_p_TCGA_300_301_302_N_GenomeWideSNP_6_H05_1344476	Y	28458648	59018259	175	-2.7846
