Unique Name	Descriptor	Wide Peak Limits	Peak Limits	Region Limits	q values	Residual q values after removing segments shared with higher peaks	Broad or Focal	Amplitude Threshold	9906_001	9906_002	9906_003	9906_004	9906_005	9906_006	9906_007	9906_008	9906_009	9906_010	9906_011	9906_012	9906_013	9906_014	9906_016	9906_017	9906_018	9906_019	9906_020	9906_021	9906_022	9906_023	9906_024	9906_027	9906_028	9906_030	9906_031	9906_033	9906_034	9906_036	9906_037	9906_038	9906_039	9906_040	9906_041	9906_043	9906_045	9906_046	9906_048	9906_049	9906_050	9906_051	9906_052	9906_055	9906_057	9906_058	9906_060	9906_061	9906_063	9906_064	9906_065	9906_066	9906_069	9906_070	9906_071	9906_073	9906_074	9906_075	9906_076	9906_078	9906_079	9906_080	9906_082	9906_083	9906_084	9906_085	9906_086	9906_087	9906_090	9906_092	9906_093	9906_094	9906_095	9906_096	9906_097	9906_098	9906_099	9906_100	9906_101	9906_102	9906_106	9906_107	9906_108	9906_109	9906_110	9906_111	9906_113	9906_114	9906_115	9906_117	9906_118	9906_119	9906_120	9906_121	9906_122	9906_124	9906_126	9906_129	9906_132	9906_133	9906_135	9906_136	9906_137	9906_138	9906_139	9906_141	9906_142	9906_143	9906_144	9906_145	9906_146	9906_147	9906_148	9906_149	9906_150	9906_151	9906_153	9906_154	9906_155	9906_157	9906_159	9906_160	9906_161	9906_163	9906_165	9906_166	9906_168	9906_170	9906_171	9906_173	9906_174	9906_175	9906_176	9906_177	9906_180	9906_183	9906_184	9906_185	9906_186	9906_187	9906_188	9906_190	9906_192	9906_193	9906_195	9906_196	9906_199	9906_202	9906_203	9906_207	9906_209	9906_210	9906_211	9906_214	9906_215	9906_216	9906_217	9906_218	9906_219	9906_220	9906_221	9906_222	9906_224	9906_225	9906_229	9906_230	9906_231	9906_233	9906_234	9906_235	9906_236	9906_238	9906_239	9906_240	9906_241	9906_242	9906_243	9906_244	9906_245	9906_246	9906_247	9906_248	9906_249	9906_250	9906_251	9906_252	9906_253	9906_254	9906_255	9906_256	9906_257	9906_258	9906_259	9906_260	9906_261	9906_262	9906_263	9906_264	9906_265	9906_267	9906_268	9906_269	9906_271	9906_032	9906_042	9906_047	9906_062	9906_116	9906_123	9906_128	9906_152	9906_156	9906_167	9906_179	9906_182	9906_189	9906_198	9906_227	9906_228	9906_272	
Amplification Peak 1	1q31.3  	chr1:184390594-221938138(probes 1431:7022)   	chr1:190825904-196509405(probes 2487:2822)   	chr1:2237744-224278917(probes 48:7432)          	4.5637e-05	 4.5637e-05	broad	0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	1	1	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	2	0	1	0	0	1	1	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 2	6p21.2  	chr6:26229133-170975699(probes 75533:79110)    	chr6:29949001-170975699(probes 76156:79110)    	chr6:1-44442229(probes 69520:79109)                 	0.0094127	  0.0094127	broad	0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 3	8p23.2  	chr8:1-16232269(probes 79353:84044)              	chr8:1-3992579(probes 79353:80583)                	chr8:1-16232269(probes 79353:84044)                 	0.2101	     0.2101	broad	0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 4	10q24.2 	chr10:20594146-128134144(probes 96008:108657)	chr10:20594146-128134144(probes 96008:108657)	chr10:123605019-128134144(probes 107569:108657)	0.2101	     0.2101	broad	0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 5	14q11.2 	chr14:19747098-22083901(probes 146300:146613) 	chr14:19785866-22083901(probes 146306:146613) 	chr14:19492424-33249117(probes 146253:148566)    	0.0035275	  0.0035275	broad	0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	1	0	0	1	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 6	18p11.23	chr18:1-76117153(probes 166244:169302)          	chr18:1-76117153(probes 166244:169302)          	chr18:1-15096726(probes 166244:169301)             	0.11651	    0.11651	broad	0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 7	21q22.2 	chr21:35310158-40104663(probes 178994:180181) 	chr21:40068572-40104663(probes 180160:180181) 	chr21:1-46902239(probes 174830:181649)            	5.3353e-46	 5.3353e-46	broad	0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	1	0	1	2	0	0	0	0	2	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	2	0	0	1	2	0	0	0	0	0	0	0	1	0	1	2	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	2	0	0	2	1	0	0	0	0	0	0	0	0	2	1	1	0	0	0	0	0	2	0	0	1	0	0	2	0	0	0	0	1	0	1	0	0	0	1	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	1	2	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	2	2	0	0	0	1	0	0	2	2	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 1	3q26.32	chr3:178114557-179244143(probes 55023:55206)    	chr3:178395237-178848439(probes 55064:55136)    	chr3:178395237-178848439(probes 55064:55136)    	0.16207	    0.16207	focal	0: t>-0.1; 1: 0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 2	7p22.3 	chr7:159285-158628139(probes 79119:79352)            	chr7:1907858-158628139(probes 79278:79352)          	chr7:1-2554048(probes 79111:79351)                   	0.0088227	  0.0088227	broad	0: t>-0.1; 1: 0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 3	9p22.3 	chr9:15218833-16038843(probes 91116:91312)        	chr9:15288801-15561629(probes 91149:91213)        	chr9:1-16255818(probes 87115:91382)                  	1.4453e-38	 1.4453e-38	both	0: t>-0.1; 1: 0.1>t> -1.3; 2: t< -1.3	0	1	0	1	1	0	0	0	1	0	0	0	1	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	1	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	1	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	1	1	1	0	0	1	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	0	0	1	0	0	1	0	0	0	0	1	0	1	1	0	0	1	1	0	0	1	0	0	0	1	0	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 4	10q25.2	chr10:111810808-111864081(probes 104804:104811)	chr10:111810808-111851043(probes 104804:104810)	chr10:111810808-111851043(probes 104804:104810)	0.16207	    0.16207	focal	0: t>-0.1; 1: 0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 5	11q23.3	chr11:117856312-118379049(probes 132824:132873)	chr11:117856312-118379049(probes 132824:132873)	chr11:117856312-118379049(probes 132824:132873)	0.12492	    0.12492	focal	0: t>-0.1; 1: 0.1>t> -1.3; 2: t< -1.3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 6	12p13.2	chr12:11764556-132449811(probes 138162:138181)   	chr12:11764556-11791239(probes 138162:138168)    	chr12:1-11806013(probes 136592:138180)              	2.3283e-19	 2.3283e-19	both	0: t>-0.1; 1: 0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	1	0	0	0	1	2	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 7	13q31.1	chr13:25499129-90583866(probes 139816:141051)    	chr13:84333404-87273866(probes 140009:140482)    	chr13:25499129-114092979(probes 139816:146215)  	0.0015717	  0.0015717	broad	0: t>-0.1; 1: 0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 8	15q12  	chr15:23587299-23673135(probes 149132:149159)    	chr15:23600788-23655334(probes 149142:149158)    	chr15:23587299-23673135(probes 149132:149159)    	0.040984	   0.040984	focal	0: t>-0.1; 1: 0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 9	17p12  	chr17:139938-16118111(probes 163288:165989)        	chr17:11467739-11875750(probes 165112:165171)    	chr17:1-18817320(probes 163266:166242)               	0.0050215	  0.0050215	broad	0: t>-0.1; 1: 0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 10	19p13.3	chr19:1-63811651(probes 169303:169354)              	chr19:1-63811651(probes 169303:169354)              	chr19:1-1311574(probes 169303:169353)               	1.6003e-08	 1.6003e-08	broad	0: t>-0.1; 1: 0.1>t> -1.3; 2: t< -1.3	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 11	20p12.2	chr20:10376777-10398605(probes 171789:171793)    	chr20:10376777-10398605(probes 171789:171793)    	chr20:10358432-10407612(probes 171785:171795)    	1.2706e-11	 1.2706e-11	focal	0: t>-0.1; 1: 0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 12	21q22.2	chr21:38685887-38727744(probes 179767:179775)    	chr21:38685887-38727744(probes 179767:179775)    	chr21:38685225-38728754(probes 179766:179778)    	0.00080719	 0.00080719	focal	0: t>-0.1; 1: 0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 13	21q22.3	chr21:42930778-46944323(probes 180966:181650)    	chr21:44195317-46240751(probes 181191:181531)    	chr21:42930778-46902239(probes 180966:181649)    	0.040984	   0.040984	focal	0: t>-0.1; 1: 0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 14	Xp22.33	chrX:1-154824264(probes 187810:187900)                	chrX:1-154824264(probes 187810:187900)                	chrX:1-1016563(probes 187810:187899)                   	0.00056676	 0.00056676	broad	0: t>-0.1; 1: 0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	1	0	0	2	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 1 - log2 ratios	1q31.3  	chr1:184390594-221938138(probes 1431:7022)   	chr1:190825904-196509405(probes 2487:2822)   	chr1:2237744-224278917(probes 48:7432)          	4.5637e-05	 4.5637e-05	broad	Actual Log2 Ratio Given	0	0.5993	0.541	0	0	0	0	0	0	0	0.3277	0	0	0	0	0.6508	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.6415	0	0	0	0	0	0	0	0.5898	0	0	0.6135	0	0	0	0	0	0	0.9855	0	0.3674	0	0	0.5801	0.8914	0	0	0	0	0	0.406	0	0	0	0	0	0.6415	0	0	0	0.3674	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.7442	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.5607	0	0	0.6229	0	0.6323	0	0	-0.4383	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.6508	0	0	0	0.5361	0	0	0.0151	0	0	0	0	0	0	0.6826	0	0	0	0	0	0	0	0	0	0	0	0	0.6599	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 2 - log2 ratios	6p21.2  	chr6:26229133-170975699(probes 75533:79110)    	chr6:29949001-170975699(probes 76156:79110)    	chr6:1-44442229(probes 69520:79109)                 	0.0094127	  0.0094127	broad	Actual Log2 Ratio Given	0	0	0	0	0	0	0	0	0	0	0.3103	-0.00086883	0	0	0	0	0.5801	0	0	0	0.6508	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.99979	0	0	0	0	0	0	0	0	0	0.5059	0	0	0	0	0	0	0	0	0	0	0	0	0.4647	0	0	0	0	0	0	0	0	0.433	0	0	0	0.6871	0	0	0	0	0.5656	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.4594	0	0	0.5607	0.5656	0	0	0	0	0	0	0	0	-0.0025133	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.0523	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.4672	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.6276	0	0	0	0	0.5261	0	0	0	0.6229	0	0.5801	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 3 - log2 ratios	8p23.2  	chr8:1-16232269(probes 79353:84044)              	chr8:1-3992579(probes 79353:80583)                	chr8:1-16232269(probes 79353:84044)                 	0.2101	     0.2101	broad	Actual Log2 Ratio Given	0	0	0	0	0	0	0	0	0	0	0.3785	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.9574	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.4489	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.3219	0	0	0	0	0	0	0	0	0	0	0.7268	0	0	0	0	0	0	0	0	0.275	0.5607	0	0	0	0	0	0	0	0	-1.1844	1.101	0	0	0	0	0	0	0.263	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.4854	0	0	0	0	0	0	0	0	0.4005	0	-0.511	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.6415	0	0	0	0	0.406	0	0	0	0	0	0	0	0	0.5898	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 4 - log2 ratios	10q24.2 	chr10:20594146-128134144(probes 96008:108657)	chr10:20594146-128134144(probes 96008:108657)	chr10:123605019-128134144(probes 107569:108657)	0.2101	     0.2101	broad	Actual Log2 Ratio Given	0	0	0	0	0	0	0	0	0	0	0.3161	0	0	0	0	0	0	0	0	0	0.6554	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.6645	0	0	0	0	0	0	0	0	0	0	0	0.4168	0	0	0	-1.1203	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.844	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.0316	0	0	0	0	0	0	0	0	-0.9296	0	0	0	0	0	0	0	0	0	0	0	0	0.0251	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.3951	0.5059	0	0	0.5945	0.5753	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 5 - log2 ratios	14q11.2 	chr14:19747098-22083901(probes 146300:146613) 	chr14:19785866-22083901(probes 146306:146613) 	chr14:19492424-33249117(probes 146253:148566)    	0.0035275	  0.0035275	broad	Actual Log2 Ratio Given	0	0	0	0	0	0	0	0	0	0	0.3334	0	0	0	0	0	0.9107	0	0	0	0.6645	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.4647	0	0	0	0	0	0	0	0	0	0	0	0	0.7355	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.6229	0	0	0.5509	0.6041	0	0	0	0	0	0	0	0	0	0.6323	0	0	0	0	0.406	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.6926	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.511	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.511	0	0.5656	0	0	0	0	0.5059	0	0	0.5801	0.6415	0	0.6182	0	0.4489	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 6 - log2 ratios	18p11.23	chr18:1-76117153(probes 166244:169302)          	chr18:1-76117153(probes 166244:169302)          	chr18:1-15096726(probes 166244:169301)             	0.11651	    0.11651	broad	Actual Log2 Ratio Given	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.546	0	0	0	0.6736	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.4803	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.5993	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.4542	0.6088	0	0	0.5607	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.7013	0	0	0	0	0	0.4647	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.0448	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.5361	0	0.6182	0	0	0	0	0.5261	0	0	0	0.5993	0	0.6041	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 7 - log2 ratios	21q22.2 	chr21:35310158-40104663(probes 178994:180181) 	chr21:40068572-40104663(probes 180160:180181) 	chr21:1-46902239(probes 174830:181649)            	5.3353e-46	 5.3353e-46	broad	Actual Log2 Ratio Given	0	0	0	0	0	0	0	0	0.546	0	0.6323	1.2048	0	0	0	0	0.9855	0.5898	0	0	0.585	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1.696	0	0	0.3674	0	0	0	0	0	0	0	1.7698	0	0	0.84	2.4449	0	0	0	0	0	0	0	0.4276	0	0.2928	1.2898	1.2265	0	0	0	0	1.0772	0	0	0	0	0	0	0	0	0	0	0	0	2.2645	0	0	0	0	1.26	0	0	1.0036	0.5753	0	0	0	0	0	0	0	0	2.2943	0.6088	0.6229	0	0	0	0	0	0.9222	0	0	0.6508	0	0	1.6088	0	0	0	0	0.5558	0	0.5103	0	0	0	0.4803	0	0	0	0.5753	0	1.1276	0	0	0	0	0	0	0	0	0	0	0	0.4781	0	0.5558	1.0738	0	0	0	0	0	0	0	0	0	0.7004	0	0	0	0	0	0	0	0.926	0	1.101	1.8972	0	0	0	0.516	0	0	1.0807	1.1043	0	1.121	0	0	0	0	0	0	0	0.4906	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 1 - log2 ratios	3q26.32	chr3:178114557-179244143(probes 55023:55206)    	chr3:178395237-178848439(probes 55064:55136)    	chr3:178395237-178848439(probes 55064:55136)    	0.16207	    0.16207	focal	Actual Log2 Ratio Given	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.9745	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.7013	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-1.1047	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.9296	0	0	0	0	0	0	0	0	0	0	0.0316	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.511	0	0	0	0	-0.3771	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.6041	0	0	0	0	0	-0.9714	-0.9159	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 2 - log2 ratios	7p22.3 	chr7:159285-158628139(probes 79119:79352)            	chr7:1907858-158628139(probes 79278:79352)          	chr7:1-2554048(probes 79111:79351)                   	0.0088227	  0.0088227	broad	Actual Log2 Ratio Given	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.66689	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.6552	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-1.0145	0	0	0	0	0	0	0	0	0	0	0	-0.4383	-0.4739	0	-1	0	0	0	-1.0145	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.511	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.9574	0	0	0	-0.3401	0	0	0	0	0	0	0	0	0	0	0	0	-0.9714	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 3 - log2 ratios	9p22.3 	chr9:15218833-16038843(probes 91116:91312)        	chr9:15288801-15561629(probes 91149:91213)        	chr9:1-16255818(probes 87115:91382)                  	1.4453e-38	 1.4453e-38	both	Actual Log2 Ratio Given	0	-0.9296	0	-0.88817	-0.9856	0	0	0	-0.98514	0	0.3505	0	-0.889	0	0	0	0	0	0.55528	-1.1833	0	0	0	-0.8757	-0.8237	0	0	0	-0.9574	0	-0.8237	0	0	0	0	0	0	-1.0429	0	0	0	0	0	0	0	0	0	-0.7984	-0.3216	0	0	-0.5972	0	0	-0.8625	0	0	0	0	0.5945	-0.9159	-0.8757	-0.9714	0	0	0	0	0	0	0	0	0	0	-0.8494	0	-1	0	0	-0.0043292	0	-0.8494	-1.074	-1.074	0	0	-1.167	0	0	0	0	0	0	-1.0893	-0.8625	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-1.0429	0	-0.73631	0	0	-0.8494	0	0	0	-1.1203	0	0	-1.1203	0	0	0	0	-0.737	0	-0.4383	-1.0893	0	0	-0.82293	-1.1037	0	0	-0.9434	0	0	0	-1.0281	0	0	0	-1.1193	0	-1.0429	0	0	0	-0.511	0	0	0	0	0	0	0	0	0	-0.9856	0	0	0	0	0	0	0	0	-1	0	0.5261	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.9574	0	-0.9856	0	0	0	0	0	0	0	-0.9296	0	0	-0.7859	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 4 - log2 ratios	10q25.2	chr10:111810808-111864081(probes 104804:104811)	chr10:111810808-111851043(probes 104804:104810)	chr10:111810808-111851043(probes 104804:104810)	0.16207	    0.16207	focal	Actual Log2 Ratio Given	0	0	0	0	0	0	0	0	0	0	0.3161	0	0	0	0	0	0	0	0	0	0.6554	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-1.0893	0	0	0	0	0	0.6645	0	0	0	0	0	0	0	0	0	0	0	0.4168	0	0	0	-1.1203	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.844	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.0159	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.725	0	0	0.0251	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.373	0.5059	0	0	0.5945	0.5753	0	0	0	0	0	0	0	-2.6439	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 5 - log2 ratios	11q23.3	chr11:117856312-118379049(probes 132824:132873)	chr11:117856312-118379049(probes 132824:132873)	chr11:117856312-118379049(probes 132824:132873)	0.12492	    0.12492	focal	Actual Log2 Ratio Given	0	0	0	-0.8757	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-1.0439	0	0	0	-0.9714	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.5607	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.406	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-1.0893	0	0	0	0	0	0	0.0574	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.0151	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-1.074	0.6041	0	0	0	0	0	0	0	0	0	0	0	0	-0.7735	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 6 - log2 ratios	12p13.2	chr12:11764556-132449811(probes 138162:138181)   	chr12:11764556-11791239(probes 138162:138168)    	chr12:1-11806013(probes 136592:138180)              	2.3283e-19	 2.3283e-19	both	Actual Log2 Ratio Given	0	0	0	0	0	0	0	0	0	0	0	0	-0.8757	0	0	0	0	0	0	-1.0291	0	0	0	0	0	0	0	0	0	-0.3771	0	0	0	0	0	0	0	0	-2.3219	0	0	0	0	0	0	0	0	-0.9159	0	0	0	0	0	0	0	0	0	0	0	-1.0145	0	0	-0.3959	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-2.6439	0	-1.0589	0	-0.8237	0	0	0	-0.4055	-1.4344	0	0	0	0	0	0	-3.737	-0.3959	0	0	0	0	0	0	0	0	-0.9856	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.0269	0	0	0	0	0	-0.749	-1.0439	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.0251	0	0	0	0	0	0	0	-0.8365	-0.8365	0	0	-0.6215	0	0	0	0	0	0	0	0	0	0	0	-0.6666	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.8757	0	0	0	0	0	0	0	0	0	-0.5353	0	-0.7859	-1.454	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 7 - log2 ratios	13q31.1	chr13:25499129-90583866(probes 139816:141051)    	chr13:84333404-87273866(probes 140009:140482)    	chr13:25499129-114092979(probes 139816:146215)  	0.0015717	  0.0015717	broad	Actual Log2 Ratio Given	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.9434	0	0	0	0	0	0	-0.8365	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.8625	0	0	0	0	0	-0.9296	0	0	0	0	0	0	0	0	0	0	-1.0589	0	-0.8757	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.4383	0	0	0	-0.7735	0	0	0	0	0	-1.0589	0	0	0	0	0	0	0	0	0	-0.5146	0	0.03	0	0	-1	0	0	0	0	0	0	0	0	0	0.6645	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 8 - log2 ratios	15q12  	chr15:23587299-23673135(probes 149132:149159)    	chr15:23600788-23655334(probes 149142:149158)    	chr15:23587299-23673135(probes 149132:149159)    	0.040984	   0.040984	focal	Actual Log2 Ratio Given	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-1.3219	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-1.0893	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.4383	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.511	0	0	0	0	0	0	0	-1.0291	0	0	-0.9574	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.5995	0	0	0	0	0	0	0	0	-0.8494	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 9 - log2 ratios	17p12  	chr17:139938-16118111(probes 163288:165989)        	chr17:11467739-11875750(probes 165112:165171)    	chr17:1-18817320(probes 163266:166242)               	0.0050215	  0.0050215	broad	Actual Log2 Ratio Given	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.4957	0	0	0	0	0	0	0	0	0	0	0	0	-0.3865	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.4542	0	0	0	0	0	0	0	0	0	0	0	0	0.696	0	0	0	0	0	0	-1.4941	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.541	0.5753	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.7859	0	0	0	-1	0	0	0	0	0	0	0	0	0	-0.0215	0	0	0	0	0	0	-1.0145	0	0	0	0	0	0	0	0	-1.0589	0	0	0	0	0	-0.511	0	-0.889	0	0	0	0	0	0	0	0	0	0	0	-0.5249	0	0	0	0	0	0	0.511	0	0.5607	0	0	0	0	0	0	0	0.5753	0.5509	0	0.5705	0	0	0	0	0	0	0	0	0	0	0	0	-0.90141	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 10 - log2 ratios	19p13.3	chr19:1-63811651(probes 169303:169354)              	chr19:1-63811651(probes 169303:169354)              	chr19:1-1311574(probes 169303:169353)               	1.6003e-08	 1.6003e-08	broad	Actual Log2 Ratio Given	0	-1.0145	-0.8494	0	0	0	0	0	0	0	0.3103	0	0	0	0	-0.9296	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.9714	0	0	0	0	0	0	0	-0.8365	0	0	-0.9714	0	0	0	0	0	0	0	0	-0.567	0	0	-0.9434	0	0	0	0	0	0	0	0	0	0	0	0	-1.0589	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.811	0	0	-1.074	0	-0.9024	0	0	-0.4383	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.8625	0	0	-0.138	0	0	0	0	0	0	-1.3219	0	0	0	0	0	0.5261	0	0	0	0	0	0	-1.074	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.8757	0	-0.5886	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 11 - log2 ratios	20p12.2	chr20:10376777-10398605(probes 171789:171793)    	chr20:10376777-10398605(probes 171789:171793)    	chr20:10358432-10407612(probes 171785:171795)    	1.2706e-11	 1.2706e-11	focal	Actual Log2 Ratio Given	0	0	0	0	0	0	0	0	0	0	0	-0.9714	0	-1.0291	0	0	0	0	-1	0	0	0	-1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-1.304	0	0	0	0	0	0	0	-0.889	0	0	0	0	-1	0	0	0	0.5945	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.6041	0	0	0	-0.9574	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-1	0	0	0	0	0	-0.4383	0	0	0	0	0	0	-1.0439	0	0	0.6369	0	0	0	-1.1681	0	0	0	0	0	0	0	-0.0153	0	0	0.6041	-1	0	0	0	0	0	0	-1	0	0	0	0	0	0	-1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-3.6439	0	0	0	0	0	0	-1	0	0	0	0.4647	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 12 - log2 ratios	21q22.2	chr21:38685887-38727744(probes 179767:179775)    	chr21:38685887-38727744(probes 179767:179775)    	chr21:38685225-38728754(probes 179766:179778)    	0.00080719	 0.00080719	focal	Actual Log2 Ratio Given	0	0	0	0	0	0	-1.2345	0	0.546	0	0.6323	1.2048	0	0	0	0	0.9855	0.5898	0	0	0.585	0	0	0	0	0	0	0	0	0	0	0	0	-0.7984	0	0	-1.0439	0	0	0	0	0	0	0	1.696	0	-0.5886	0.3674	0	0	0	0	-1.1203	0	0	1.3813	0	0	0.84	2.4449	0	0	0	0	0	0	0	0.4276	0	0.2928	1.2898	1.2265	0	0	0	0	1.0772	0	0	0	0	0	0	0	0	0	0	0	0	2.2645	0	0	0	0	1.26	0	0	1.0036	0.5753	0	0	0	0	0	0	0	0	2.2943	0.6088	0.6229	0	0	0	0	0	0.9222	0	0	0.6508	-1.5146	0	1.6088	0	0	0	0	0.5558	0	0.5103	0	0	0	0.4803	0	0	0	0.5753	0	1.1276	0	0	0	0	0	0	0	0	0	0	0	0.4781	0	0.5558	1.0738	0	0	0	0	0	0	0	0	0	0.7004	0	0	-1.3585	0	0	0	0	0.926	0	1.101	1.8972	0	0	0	0.516	0	0	1.0807	1.1043	0	1.121	0	0	0	0	0	0	0	0.4906	-1.152	0	0	0	-1.3401	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 13 - log2 ratios	21q22.3	chr21:42930778-46944323(probes 180966:181650)    	chr21:44195317-46240751(probes 181191:181531)    	chr21:42930778-46902239(probes 180966:181649)    	0.040984	   0.040984	focal	Actual Log2 Ratio Given	0	0	0	0	0	0	0	0	0.546	0	0.6323	0.4803	0	0	0	0	0.9855	0.5898	0	0	0.585	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.3674	0	0	0	0	0	0	0	-1.1203	0	0	0.84	-1.0589	0	0	0	0	0	0	0	0.4276	0	0.2928	-0.9856	1.2265	0	0	0	0	1.0772	0	0	0	0	0	0	0	0	0	0	0	0	-1.3219	0	0	0	0	1.26	0	0	1.0036	0.5753	0	0	0	0	0	0	0	0	-1.152	0.6088	0.6229	0	0	0	0	0	0.9222	0	0	0.6508	0	0	1.6088	0	0	0	0	0.5558	0	0.5103	0	0	0	0.4803	0	0	0	0.5753	0	1.1276	0	0	0	0	0	0	0	0	0	0	0	0.4781	0	0.5558	1.0738	0	0	0	0	0	0	0	0	0	0.7004	0	0	0	0	0	0	0	0.926	0	1.101	-1.0589	0	0	0	0.516	0	0	1.0807	1.1043	0	1.121	0	0	0	0	0	0	0	0.4906	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 14 - log2 ratios	Xp22.33	chrX:1-154824264(probes 187810:187900)                	chrX:1-154824264(probes 187810:187900)                	chrX:1-1016563(probes 187810:187899)                   	0.00056676	 0.00056676	broad	Actual Log2 Ratio Given	0	0	0	0.546	0	0.5607	0	0	0	0	0	0	0	0	0	0	0	0	0	0.3448	0	0	0	0	0	0	0	0	0	0	0	0	0	-2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.415	0	0	0	0	0	0	0	0	0.4542	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-1.8625	0	-0.2345	0	0	0	0	0	0	0	0	0	0.7355	0.65265	0	0	0	-0.415	-0.415	0	0	-0.9159	0	0.6276	0	0	0	0	0	0	0	0	0	0.1467	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.5249	0	0	0	0	0	0	-0.511	0	-0.2345	0	0	-1.5146	-0.152	0	0	0	0	0	0	0	-0.415	0	0	0	0	0	0	-0.415	0	0	0	0	0	-0.415	0	0	0	0.585	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak  1- Contributing Broad Events	1q	Amplitude values represent median within significant region.	Broad Event Corresponding to Amplification Peak 1	chr1:2237744-224278917(probes 48:7432)          	4.5637e-05	 4.5637e-05	broad	0: t<0.1; 1: t>0.1	0	1	1	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	1	0	1	0	0	1	1	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak  2- Contributing Broad Events	6p	Amplitude values represent median within significant region.	Broad Event Corresponding to Amplification Peak 2	chr6:1-44442229(probes 69520:79109)                 	0.0094127	  0.0094127	broad	0: t<0.1; 1: t>0.1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak  3- Contributing Broad Events	8p	Amplitude values represent median within significant region.	Broad Event Corresponding to Amplification Peak 3	chr8:1-16232269(probes 79353:84044)                 	0.2101	     0.2101	broad	0: t<0.1; 1: t>0.1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak  4- Contributing Broad Events	10q	Amplitude values represent median within significant region.	Broad Event Corresponding to Amplification Peak 4	chr10:123605019-128134144(probes 107569:108657)	0.2101	     0.2101	broad	0: t<0.1; 1: t>0.1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak  5- Contributing Broad Events	14q	Amplitude values represent median within significant region.	Broad Event Corresponding to Amplification Peak 5	chr14:19492424-33249117(probes 146253:148566)    	0.0035275	  0.0035275	broad	0: t<0.1; 1: t>0.1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	1	0	0	1	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak  6- Contributing Broad Events	18p	Amplitude values represent median within significant region.	Broad Event Corresponding to Amplification Peak 6	chr18:1-15096726(probes 166244:169301)             	0.11651	    0.11651	broad	0: t<0.1; 1: t>0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak  7- Contributing Broad Events	21q	Amplitude values represent median within significant region.	Broad Event Corresponding to Amplification Peak 7	chr21:1-46902239(probes 174830:181649)            	5.3353e-46	 5.3353e-46	broad	0: t<0.1; 1: t>0.1	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	1	0	1	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	1	0	0	1	0	0	1	0	0	0	0	1	0	1	0	0	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	1	0	0	0	1	0	0	1	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  2- Contributing Broad Events	7p	Amplitude values represent median within significant region.	Broad Event Corresponding to Deletion Peak 2	chr7:1-2554048(probes 79111:79351)                   	0.0088227	  0.0088227	broad	0: t>-0.1; 1: t<-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  3- Contributing Broad Events	9p	Amplitude values represent median within significant region.	Broad Event Corresponding to Deletion Peak 3	chr9:1-16255818(probes 87115:91382)                  	1.4453e-38	 1.4453e-38	both	0: t>-0.1; 1: t<-0.1	0	0	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	1	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	1	0	0	1	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	0	0	1	1	0	0	1	0	0	0	1	0	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  6- Contributing Broad Events	12p	Amplitude values represent median within significant region.	Broad Event Corresponding to Deletion Peak 6	chr12:1-11806013(probes 136592:138180)              	2.3283e-19	 2.3283e-19	both	0: t>-0.1; 1: t<-0.1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  7- Contributing Broad Events	13q	Amplitude values represent median within significant region.	Broad Event Corresponding to Deletion Peak 7	chr13:25499129-114092979(probes 139816:146215)  	0.0015717	  0.0015717	broad	0: t>-0.1; 1: t<-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  9- Contributing Broad Events	17p	Amplitude values represent median within significant region.	Broad Event Corresponding to Deletion Peak 9	chr17:1-18817320(probes 163266:166242)               	0.0050215	  0.0050215	broad	0: t>-0.1; 1: t<-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  10- Contributing Broad Events	19p	Amplitude values represent median within significant region.	Broad Event Corresponding to Deletion Peak 10	chr19:1-1311574(probes 169303:169353)               	1.6003e-08	 1.6003e-08	broad	0: t>-0.1; 1: t<-0.1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  14- Contributing Broad Events	Xp	Amplitude values represent median within significant region.	Broad Event Corresponding to Deletion Peak 14	chrX:1-1016563(probes 187810:187899)                   	0.00056676	 0.00056676	broad	0: t>-0.1; 1: t<-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	1	0	0	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
