Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	1	51598	225591	26	0.3062
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	1	225801	394034	4	1.3908
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	1	524414	16026084	8377	0.0167
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	1	16026123	16026512	5	-2.3878
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	1	16026788	34864261	10730	0.0189
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	1	34875241	34877078	20	-2.6386
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	1	34886855	72541504	23767	0.0021
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	1	72541524	72583721	44	-1.6636
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	1	72583736	73530705	566	0.0137
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	1	73541281	73541368	2	-2.0278
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	1	73541761	86934225	8823	0.0105
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	1	86935821	86938181	3	-1.8334
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	1	86944315	111177604	15176	0.0201
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	1	111177743	111189749	40	-0.7691
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	1	111193590	150822330	9139	0.0329
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	1	150822391	150857118	35	0.829
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	1	150857189	167483561	11531	0.0269
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	1	167500598	167508390	6	-2.01
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	1	167509025	194981445	18194	0.0249
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	1	194981496	195079130	95	0.4718
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	1	195079153	195082414	2	-3.2424
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	1	195083353	227877792	21860	0.0232
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	1	227883479	227886819	3	-3.5446
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	1	227887079	247191011	14051	0.0222
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	2	2784	3710421	2566	-0.0229
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	2	3710462	3714413	4	-2.5188
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	2	3719946	34554898	21520	0.0024
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	2	34555087	34590667	45	0.8012
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	2	34591060	75235185	27544	0.0162
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	2	75235208	75235304	4	-2.119
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	2	75235345	76697974	1065	0.0111
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	2	76698681	76698934	5	-2.8976
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	2	76701094	79515598	1911	0.0154
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	2	79518534	79520032	2	1.9254
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	2	79520643	86791198	4460	0.0102
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	2	86806581	86807365	2	-2.3316
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	2	86823917	126158693	19224	0.0088
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	2	126168121	126168383	2	-2.8087
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	2	126168402	146578555	12427	0.0065
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	2	146580874	146583404	24	1.0529
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	2	146594276	169763305	13978	0.0106
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	2	169767098	169767205	2	-3.8651
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	2	169769712	179769900	6303	-0.0024
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	2	179775437	179787389	3	-2.17
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	2	179791836	242738129	38813	0.0138
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	3	35345	37952421	27676	0.0228
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	3	37957112	37961932	18	-0.8738
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	3	37962110	72720464	23129	0.0207
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	3	72721919	72722022	2	-2.0038
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	3	72724106	75643831	1951	0.0018
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	3	75651239	75669495	7	-1.5081
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	3	75677871	84184912	4695	0.0134
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	3	84188123	84188856	2	-3.4903
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	3	84193657	86344215	1241	0.016
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	3	86347892	86348505	2	-2.2327
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	3	86352852	96938796	3212	0.0206
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	3	96949570	96950800	2	-2.7473
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	3	96951370	190843448	57711	0.0154
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	3	190846372	190853682	12	-2.8461
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	3	190853708	199380515	5218	0.0202
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	4	2281	9832726	5802	0.0139
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	4	9832946	9839716	18	-0.8667
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	4	9839842	70424305	37084	0.0113
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	4	70424450	70425368	2	-2.8553
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	4	70426477	86862766	10080	0.0185
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	4	86862881	86863126	3	2.0139
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	4	86863154	87195118	247	0.0215
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	4	87195415	87195553	4	-1.1489
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	4	87195603	104965020	10582	0.021
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	4	104971079	104971086	5	1.2603
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	4	104971093	115727073	6554	0.023
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	4	115727615	115733875	4	-2.5804
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	4	115734189	191261904	47029	0.02
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	5	68532	21485033	15764	0.0198
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	5	21486957	21487755	4	-2.1467
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	5	21488195	27561664	3560	0.0266
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	5	27561673	27561777	7	-1.1277
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	5	27563236	46227641	11434	0.0187
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	5	46231640	46235192	4	-1.33
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	5	46245056	46287063	13	0.0957
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	5	46306765	46309259	8	0.8708
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	5	46313969	61609129	7950	0.025
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	5	61610748	61612030	3	-1.3727
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	5	61617949	70290662	4473	0.023
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	5	70342415	70689828	9	0.961
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	5	70696507	75485776	3130	0.0235
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	5	75485823	75485900	3	1.6714
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	5	75485932	103879120	16388	0.0242
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	5	103888272	103888503	4	1.6888
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	5	103888948	139149061	22741	0.0215
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	5	139158346	139163080	4	-1.6303
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	5	139164128	140198906	484	-0.004
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	5	140204020	140223940	13	-2.0648
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	5	140232347	155407683	10212	0.0139
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	5	155409350	155415307	14	-2.5357
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	5	155427828	180722926	16819	0.0139
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	6	94661	26860476	20271	0.0183
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	6	26860551	26863894	4	-1.6699
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	6	26866009	29945167	1446	0.0276
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	6	29945293	29945437	2	-2.3854
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	6	29945456	31381009	682	0.0235
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	6	31381682	31425676	17	0.7297
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	6	31426143	32609277	520	0.0155
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	6	32616454	32626747	5	-1.5442
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	6	32635262	32695435	25	-0.1804
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	6	32700999	32710085	7	-1.6025
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	6	32710247	54039043	13754	0.0152
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	6	54039110	54043374	9	0.9802
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	6	54043657	74648586	10512	0.0183
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	6	74648953	74658138	10	-2.2917
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	6	74660283	77474189	1749	0.0169
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	6	77474806	77474951	3	-1.1368
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	6	77476915	77493251	15	0.0087
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	6	77496587	77509101	15	-3.9932
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	6	77509111	77509476	6	-1.5168
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	6	77517792	79025824	982	0.021
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	6	79028416	79098352	112	0.5536
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	6	79098438	170892930	59739	0.0197
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	7	52911	54347867	38556	0.0231
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	7	54353999	54354011	6	1.3367
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	7	54360982	64231500	3138	0.0314
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	7	64231776	64232553	4	-1.8648
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	7	64233133	91195290	15249	0.0185
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	7	91195386	91196969	10	0.7759
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	7	91197272	124717869	19690	0.0206
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	7	124717958	124720459	2	-2.1058
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	7	124721113	125831379	755	0.0184
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	7	125831396	125833851	19	0.7747
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	7	125834112	133435717	4700	8e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	7	133435735	133446381	29	0.5592
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	7	133448593	142154515	5698	0.0149
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	7	142156294	142165914	29	-2.2001
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	7	142176424	142937021	474	0.0199
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	7	142937218	143163801	84	-0.3269
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	7	143163911	158819765	10007	0.0158
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	8	21254	584973	329	-0.0536
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	8	585220	585908	8	1.939
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	8	591043	12284553	10984	0.0242
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	8	12284689	12312853	35	-0.5512
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	8	12313350	25028104	10477	0.0215
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	8	25030360	25047044	29	0.444
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	8	25047152	39349816	9032	0.0191
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	8	39354760	39506122	58	-2.2362
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	8	39507456	112363642	42022	0.0023
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	8	112363846	112364436	6	-2.3007
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	8	112369457	127653817	9989	4e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	8	127654332	127654555	4	-6.4428
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	8	127656310	146268959	12926	0.0138
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	9	36587	14092612	12926	0.0309
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	9	14093242	14093618	3	-1.9309
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	9	14095813	23351805	7509	0.0091
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	9	23353115	23363484	8	-2.5703
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	9	23368488	39305036	10798	0.013
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	9	39311378	40466154	18	0.8175
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	9	40498680	44569219	180	0.0558
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	9	44667855	44767041	31	-1.2601
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	9	44770235	45424842	47	-0.079
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	9	45424855	45446350	3	-1.7034
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	9	45446537	46265538	35	-0.0643
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	9	46278026	66210379	21	0.5849
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	9	66222018	89712414	14508	0.0043
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	9	89743971	89744039	2	-2.6787
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	9	89747777	117896341	20005	0.0181
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	9	117896588	117899204	3	2.1756
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	9	117900428	140211215	13747	0.0193
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	10	62809	13089606	10923	0.0031
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	10	13089662	13090176	7	-1.1258
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	10	13090434	18123568	3948	0.0187
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	10	18146449	18239819	10	-1.2254
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	10	18263653	24415269	4337	0.001
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	10	24417680	24418060	11	-2.1899
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	10	24418914	48911498	12994	-3e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	10	48940829	48957609	4	-2.469
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	10	48962469	51500366	1451	-0.0111
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	10	51510990	51561926	4	-2.5635
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	10	51573774	81022774	20279	0.0141
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	10	81053880	81079232	5	-2.0095
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	10	81093246	81984157	255	0.0068
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	10	81984298	81987058	2	-2.419
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	10	81987428	82508769	398	-0.0079
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	10	82509015	82509047	2	-2.4041
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	10	82512757	88941214	4556	0.0173
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	10	88946321	88948540	2	1.879
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	10	88960575	107046269	11243	0.0068
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	10	107047028	107049160	3	-2.781
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	10	107052466	135356694	20567	0.0228
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	11	188510	4924226	2474	0.0245
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	11	4924693	4932848	31	0.742
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	11	4932910	5743981	796	0.0355
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	11	5744656	5765715	32	0.588
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	11	5765914	48554998	30074	0.0269
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	11	48558010	48559252	2	-2.1362
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	11	48562894	55119916	1224	0.0472
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	11	55130608	55210152	60	0.5959
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	11	55217259	134449982	52384	0.0074
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	12	20703	11395209	7410	0.0277
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	12	11395242	11417556	24	0.6852
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	12	11427380	30126848	13126	0.0218
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	12	30130534	30134842	19	0.6149
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	12	30134857	33185927	2272	0.0346
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	12	33192673	33198641	27	-0.6745
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	12	33199627	44186092	5622	0.0284
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	12	44190705	44195804	4	-2.5298
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	12	44199559	89007481	27260	0.022
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	12	89015800	89017688	8	-1.3202
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	12	89017744	132288262	29221	0.0212
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	13	17924949	23528915	3677	0.0214
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	13	23530140	23531050	4	-1.7038
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	13	23533254	36969135	9874	0.0142
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	13	36970036	36982757	16	0.7358
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	13	36986330	51992800	9902	0.0211
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	13	51995985	52003786	3	-1.5044
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	13	52015880	56656627	2630	0.0223
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	13	56661148	56676369	28	-0.5591
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	13	56676381	114126499	38135	0.0153
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	14	18072124	18627041	40	-0.098
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	14	18632139	19495700	152	0.477
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	14	19495751	105786534	55003	0.0241
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	14	105788401	105824912	21	0.7823
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	14	105825048	105945406	55	0.0341
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	14	105950876	105983082	36	0.6922
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	14	105983406	106356482	239	-0.0039
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	15	18276341	18754311	76	0.0344
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	15	18771168	18810700	6	1.1488
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	15	18816444	18838435	16	0.1545
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	15	18841465	18846971	19	-0.5459
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	15	18850041	19764921	190	0.2552
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	15	19781841	20088324	114	0.5899
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	15	20088838	32507087	7392	0.0106
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	15	32507103	32643110	72	-2.7663
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	15	32645302	45028747	7480	0.0086
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	15	45029503	45029865	2	-2.3453
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	15	45032592	51572283	4163	0.0083
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	15	51572331	51572571	5	-1.1452
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	15	51577539	74678566	14797	0.0172
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	15	74678682	74682830	20	-2.093
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	15	74689234	100286563	17672	0.0268
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	16	777	34317102	20520	0.0212
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	16	34317210	34614572	170	0.4379
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	16	34618468	54352715	6595	0.0258
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	16	54353890	54379898	21	-2.0151
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	16	54379945	88815036	25143	0.0169
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	17	526	27410662	15366	0.0182
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	17	27419751	27422846	3	-1.8774
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	17	27424996	36676616	5590	0.0147
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	17	36676629	36683683	15	1.1225
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	17	36683699	36683976	3	4.0144
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	17	36684057	41568205	2543	0.0106
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	17	41568981	41717786	85	-0.4228
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	17	41718140	68273289	16085	0.0177
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	17	68273572	68275450	2	-3.7831
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	17	68277570	78643088	5570	0.0011
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	18	1543	49778199	31971	0.0183
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	18	49778840	49779150	3	-2.4711
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	18	49782366	64894325	10594	0.012
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	18	64897086	64904306	38	-0.8349
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	18	64908676	76116029	8171	0.0264
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	19	41910	1179292	266	0.0118
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	19	1179301	1198835	4	1.6735
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	19	1222274	47955346	20283	0.0104
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	19	47956190	48024787	29	0.6459
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	19	48025584	63789666	8752	0.0148
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	20	9305	1508787	1200	0.0164
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	20	1508802	1541893	45	1.0019
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	20	1545946	26226316	18780	0.0194
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	20	26228601	28158581	41	-0.5627
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	20	28165872	62426597	22382	0.0175
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	21	9758742	10030012	74	-0.7613
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	21	10030151	43792481	22553	0.018
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	21	43795301	43797240	2	-2.181
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	21	43798095	46921385	1760	0.02
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	22	14432528	17727928	1535	0.0069
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	22	17728158	17728199	2	-2.7723
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	22	17728926	20134899	1337	-0.0397
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	22	20136401	20174023	24	0.5738
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	22	20175067	20787166	393	-0.0295
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	22	20790767	20790775	2	-3.0628
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	22	20792979	37693565	12215	0.0218
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	22	37693630	37705253	23	-0.6162
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	22	37719574	39124536	696	0.0245
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	22	39124766	39127618	2	-1.9051
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	22	39130017	49581321	7317	0.0123
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	X	108477	55717984	32311	0.0259
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	X	55719384	55724281	3	-1.871
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	X	55724411	56320820	311	-0.0202
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	X	56323113	56472044	67	0.9321
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	X	56474531	115051983	28108	0.0157
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	X	115052431	115064666	6	-1.8171
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	X	115070447	150043556	21337	0.0119
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	X	150044592	150046117	2	-2.4246
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	X	150047213	154835548	2429	0.0084
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	Y	2710438	6095471	804	-2.6993
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	Y	6099351	6123042	13	-2.5917
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	Y	6123146	6213454	49	-3.2462
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	Y	6215929	6387325	72	-4.2103
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	Y	6387861	8671585	1254	-3.1331
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	Y	8671794	8688728	7	-0.251
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	Y	8690731	8742551	34	-2.9965
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	Y	8742843	10369564	354	-3.5317
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	Y	10384614	13534015	696	-3.0286
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	Y	13535818	13540211	5	-6.2199
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	Y	13541682	14099670	249	-2.9642
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	Y	14099736	14103917	3	-7.7512
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	Y	14104283	17430438	1760	-3.1718
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	Y	17430718	17568822	77	-2.7382
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	Y	17572959	19484001	913	-3.6597
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	Y	19484450	22925469	1276	-3.1774
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	Y	22926090	25040616	411	-3.6433
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	Y	25040759	25684358	81	-4.4666
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	Y	25707759	26130472	96	-2.9667
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	Y	26130505	26861404	257	-3.9329
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C04_845240	Y	26866725	57427647	176	-2.9005
