Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	51598	1500664	226	0.1003
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	1617778	1662463	15	-0.7938
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	1677447	12906093	6312	0.0202
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	13081670	13248629	12	0.6093
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	13249076	16878565	2186	0.027
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	16884037	16885043	11	-0.7177
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	16885328	16983883	39	0.3603
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	16984146	72535958	34107	0.0075
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	72541006	72583736	48	-1.517
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	72584492	81661044	5775	0.0032
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	81661190	81661193	2	-5.3162
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	81661255	103904753	14264	-0.0021
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	103910761	104104926	55	0.4627
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	104105024	108531282	2874	0.0064
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	108535758	108539019	3	-3.1009
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	108540627	143968539	8160	0.0074
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	143968791	143987628	4	-1.3424
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	143987827	146851961	889	0.034
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	146894193	146903393	4	-1.3888
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	146903515	150822151	1695	0.028
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	150822330	150853218	35	1.5301
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	150857118	159780383	5471	0.0052
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	159784563	159917245	51	0.4761
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	159918926	167483561	6000	-7e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	167500598	167508390	6	-2.8877
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	167509025	173063179	3521	-4e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	173063322	173068477	16	-0.9587
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	173068495	184530686	7731	-0.001
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	184531355	184532571	2	-1.8202
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	184532699	194981496	6907	0.0022
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	194994473	195089940	98	0.3341
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	195090236	197374325	1374	0.0021
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	197377986	197378595	5	0.9431
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	197379094	206504233	6029	-2e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	206504444	206523560	32	0.6224
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	206524332	208137685	1358	0.0104
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	208148236	208148688	2	-1.8826
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	208150607	215776513	5380	-0.0014
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	215777156	215777183	2	-2.311
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	215786186	217466417	1120	0.0097
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	217469050	217469388	3	-1.1344
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	217471689	219017628	1049	-0.0105
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	219017758	219019933	2	-1.4692
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	219020400	219434801	297	-0.0086
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	219434980	219439350	2	-1.8521
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	219439790	241115363	15387	-2e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	241116497	241152179	55	0.3982
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	241152283	247191011	3792	0.0076
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	2	2784	3180424	2246	0.049
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	2	3182004	3182752	2	1.5061
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	2	3182859	34544573	21835	0.0072
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	2	34552819	34590561	46	0.6527
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	2	34591060	41091513	4808	0.0038
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	2	41091552	41104769	31	0.3395
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	2	41104782	46574014	4094	0.0038
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	2	46574036	46574045	2	-1.6377
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	2	46574055	52595241	4084	0.0069
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	2	52597429	52635026	40	0.6505
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	2	52635046	146580913	53540	0.0015
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	2	146580927	146583404	21	-2.2678
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	2	146594276	242738129	59064	-2e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	35345	65163493	45319	0.0063
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	65164275	65185339	51	-0.6323
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	65185355	68828854	2422	0.0058
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	68828949	68830103	14	-1.4233
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	68831448	75498553	4862	-0.0031
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	75503860	75655239	62	-0.6242
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	75659251	81677770	3419	0.0117
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	81678782	81679997	3	-1.243
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	81683487	84782483	1582	0.0035
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	84782561	84784826	12	-0.594
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	84784851	131249276	24750	0.002
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	131258548	131288926	50	0.5713
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	131289614	138510650	4482	0.0064
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	138510652	138510653	2	1.7556
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	138513519	163990886	15789	-0.0018
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	163990962	164015644	17	-0.5073
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	164017424	164023184	6	-2.117
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	164028410	164106575	45	-0.3772
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	164106591	164108689	3	-1.6448
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	164109266	190843448	16654	0.0031
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	190846372	190847332	11	-0.578
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	190853682	194360596	2492	0.0093
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	194360656	194365597	19	-1.247
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	194369129	199380515	2701	0.0281
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	2281	5367636	2608	0.0182
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	5370687	5371835	2	-1.8237
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	5374196	9066075	2630	0.0206
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	9070328	9088443	9	1.7217
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	9095185	9832946	549	0.0059
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	9837881	9844366	32	-0.5469
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	9845240	34455449	16972	0.001
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	34462895	34501120	38	-0.5062
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	34506267	68943659	19455	0.0047
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	68964800	68970737	5	0.9782
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	68977394	69027207	9	0.0697
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	69043083	69168574	68	-1.9332
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	69171930	70162241	334	0.0428
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	70163001	70266388	52	-0.4046
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	70266611	78011629	4615	0.0015
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	78011744	78012802	11	0.6741
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	78012853	83887035	3723	0.0034
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	83887654	83887826	2	-3.0154
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	83891099	87194247	2083	-0.0057
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	87195118	87198788	19	-0.5272
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	87198968	92157195	3036	-0.0106
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	92157415	92157675	3	-1.4159
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	92157760	104965020	7522	0.0025
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	104971079	104971086	5	-1.0284
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	104971093	115393149	6311	0.0035
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	115394772	115403701	25	-1.6711
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	115403715	156021998	24087	0.0035
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	156022455	156022528	3	-3.2312
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	156022649	162093450	3920	0.0086
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	162099468	162104050	20	-0.6572
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	162104358	172605921	6662	0.0073
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	172611459	172614019	8	1.7121
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	172614033	173224503	401	0.0023
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	173225723	173226108	12	0.9268
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	173232554	173659097	230	-0.0082
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	173661522	173661604	2	-1.858
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	173661802	190426037	11483	0.0108
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	190432112	190436258	4	-2.4333
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	190436765	191261904	385	0.0405
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	68532	784891	322	0.1049
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	785903	886628	44	0.7037
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	905566	21485033	15387	0.0142
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	21486957	21488195	5	-2.3479
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	21488253	57365287	20103	0.0019
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	57365340	57369290	27	-0.5743
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	57374114	97070877	22893	6e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	97074222	97125076	43	-0.8821
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	97125440	104461321	4330	0.0127
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	104461493	104530866	45	-1.0042
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	104531836	177131055	47757	0.0046
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	177160157	177165211	3	2.1411
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	177187571	177239241	7	-0.136
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	177242943	180312809	1807	0.0225
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	180319744	180350517	15	0.5158
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	180350709	180722926	171	0.0606
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	94661	199283	101	0.0293
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	202353	247306	24	0.5647
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	248017	321937	73	0.2198
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	323703	325821	3	0.6787
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	326149	29979615	21533	0.003
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	29982621	30006876	11	-0.8392
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	30007656	32557028	1173	0.0246
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	32557501	32681749	35	0.8521
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	32681992	32798775	78	0.0938
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	32798790	32798808	2	1.8744
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	32798923	48873931	10273	8e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	48881254	48882455	3	-1.368
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	48883208	54039110	3403	0.0038
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	54039189	54039814	6	-1.8332
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	54043307	67094767	5490	0.0217
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	67097634	67099913	7	0.8931
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	67099956	75590232	5631	0.0044
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	75590900	75590901	2	2.5351
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	75591116	77496767	1156	0.0105
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	77496813	77502918	10	-0.6644
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	77506288	79019608	988	0.0047
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	79025784	79091904	112	0.52
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	79095953	134307961	34581	0.0058
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	134310764	134311325	2	-1.8988
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	134313765	170892930	25111	0.0074
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	52911	3689793	1738	0.0403
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	3689888	3694125	2	-1.7752
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	3694284	24001652	15423	0.0056
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	24006403	24006908	2	1.7745
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	24007342	54347867	21378	0.0017
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	54353999	54354011	6	-2.429
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	54360982	64231500	3137	0.0227
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	64231776	64233133	5	1.6453
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	64274563	70058374	3153	0.0078
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	70061186	70064077	2	-3.0504
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	70066179	125832210	32535	0.0122
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	125832718	125834115	16	0.8239
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	125834116	142154515	10421	0.0074
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	142156294	142159298	8	-2.8085
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	142159383	142165235	13	-1.3015
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	142165268	142165614	6	-2.7321
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	142165684	158819765	10564	0.0195
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	8	21254	12260380	11304	0.0309
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	8	12261219	12468116	99	0.3251
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	8	12483119	25030393	10410	0.0097
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	8	25030439	25040250	25	0.6826
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	8	25047021	40302954	9679	0.0011
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	8	40302956	40308668	33	-0.9118
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	8	40312067	40891153	452	-0.0114
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	8	40897009	40897628	2	-2.2452
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	8	40902837	137751541	58670	0.0022
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	8	137757067	137932589	173	-0.9108
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	8	137933062	146268959	4990	0.028
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	9	36587	23351805	20422	0.0148
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	9	23353115	23363484	8	1.0575
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	9	23368488	27908516	3392	0.0069
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	9	27911443	27914051	2	-1.9705
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	9	27914178	78260281	13899	0.0108
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	9	78265472	78268233	3	-2.1501
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	9	78268493	89712414	8319	0.0057
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	9	89743971	89744039	2	-1.7736
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	9	89747777	92649398	2034	0.0056
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	9	92649489	92649594	2	-1.6339
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	9	92649953	112064263	13681	0.0028
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	9	112064610	112067990	3	-3.2805
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	9	112072252	140211215	18010	0.0091
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	62809	20880880	17015	0.0019
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	20890118	20893509	5	-1.8032
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	20893540	24417680	2199	-0.012
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	24417681	24418060	10	1.2224
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	24418914	27263909	1990	-0.0018
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	27265910	27268479	13	0.4957
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	27269999	31286516	3030	0.0046
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	31291340	31291828	12	-0.8558
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	31291891	45390058	7193	0.0062
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	45392878	45396241	5	-1.0794
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	45400342	46839717	240	0.0071
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	47011195	47122809	112	0.6717
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	47127682	66976164	12846	0.016
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	66976282	66984436	28	0.5004
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	66984452	88966577	14461	0.0043
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	89019223	89028321	2	1.9885
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	89036478	124334099	23865	0.0027
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	124334213	124336904	3	-4.746
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	124336968	135356694	7907	0.0199
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	11	188510	5746317	3302	0.0122
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	11	5746445	5765715	27	0.4872
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	11	5765914	22300731	12368	0.0054
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	11	22308044	22308181	2	-2.5462
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	11	22311821	50952948	18528	0.0056
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	11	50983318	51072012	14	-0.9034
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	11	51072685	55119916	372	0.037
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	11	55130608	55198894	48	0.8235
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	11	55200787	101099594	28616	0.0071
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	11	101103070	101103174	4	1.5052
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	11	101103422	134449982	23725	0.0067
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	20703	9521823	6198	0.0127
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	9525137	9619559	24	-1.8149
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	9626236	30130977	14333	0.0032
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	30131009	30134857	16	-0.6751
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	30134881	55111578	14135	0.0111
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	55111774	55112328	3	-1.7901
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	55112346	65201118	6084	0.0091
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	65201562	65207026	3	-1.3499
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	65208066	71528383	4386	0.0026
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	71531671	71531672	2	-1.7504
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	71539459	127794839	36672	0.0081
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	127796466	127798498	7	-0.9388
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	127799941	130686668	2493	0.0333
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	130698537	130708284	14	0.6874
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	130708322	132288262	570	0.0622
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	13	17924949	114126499	64217	0.0021
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	14	18072124	18539520	37	-0.0124
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	14	18611714	18853861	17	0.9949
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	14	18854152	19270023	27	0.5301
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	14	19270221	19492423	107	1.0734
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	14	19493212	73065527	34089	0.0035
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	14	73070876	73090732	9	1.0546
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	14	73099653	105822329	20880	0.0061
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	14	105824904	105824907	2	-2.3548
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	14	105824912	105945406	56	0.1432
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	14	105950876	106023900	65	-0.3734
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	14	106029287	106224087	116	0.0794
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	14	106224112	106250892	24	0.647
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	14	106255229	106356482	69	0.1364
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	15	18276341	19787133	310	-0.1363
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	15	19788634	19792388	2	2.8199
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	15	19794591	28235887	4787	0.0259
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	15	28237336	28712897	109	-0.4224
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	15	28717792	74678566	29106	-7e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	15	74678682	74682253	12	-2.7037
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	15	74682399	74682830	8	-1.0821
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	15	74689234	82331185	4422	0.0134
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	15	82331721	82334554	7	-0.8943
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	15	82338281	84308721	1125	-0.0038
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	15	84309963	84322137	8	-0.9382
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	15	84322841	100286563	12089	0.0067
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	16	777	14742568	11096	0.0169
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	16	14796096	15913069	438	0.6803
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	16	15918084	15921769	2	-0.8423
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	16	15922363	16269863	228	0.6689
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	16	16270726	18624806	1044	0.0502
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	16	18632348	18633537	2	-1.8004
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	16	18634733	32066353	7249	0.0239
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	16	32066363	33834722	280	0.2898
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	16	33836140	54354011	6930	0.0025
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	16	54354076	54374206	17	1.08
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	16	54379470	76929109	14488	0.0067
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	16	76929941	76942239	16	-1.9561
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	16	76942266	88815036	10617	0.0246
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	17	526	2919396	1479	0.031
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	17	2921295	2921998	2	-1.939
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	17	2924937	20336479	10797	0.0224
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	17	20350823	20354038	2	-2.0939
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	17	20371772	36676616	8664	0.0095
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	17	36676629	36684057	19	-0.5918
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	17	36686250	76243458	23305	0.0102
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	17	76244388	76248774	2	-2.5317
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	17	76248895	78643088	960	0.0431
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	18	1543	76116029	50740	0.0062
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	19	41910	63789666	29316	0.0123
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	20	9305	17408	20	0.172
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	20	18331	21546	3	-1.699
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	20	22347	1508562	1176	0.0273
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	20	1508787	1541849	45	0.8885
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	20	1541893	62426597	41182	0.0065
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	21	9758742	46921385	24371	0.0043
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	22	14432528	14619968	31	0.6466
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	22	14620345	14661595	10	-0.1848
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	22	14730807	14805217	21	0.6192
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	22	14824867	19279832	2240	0.0499
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	22	19279857	19283319	6	-1.1512
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	22	19286163	22601692	2275	0.0679
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	22	22601745	22723745	51	0.3474
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	22	22724015	49581321	18902	0.0181
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	108477	5707701	2361	0.0216
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	5709090	5709394	2	-1.8735
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	5711177	7567246	1430	0.0208
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	7567251	7571058	4	-2.6186
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	7571105	13364148	4343	0.0095
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	13364303	13364357	2	-4.8884
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	13365627	22108502	5029	-0.0083
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	22109121	22113521	2	-3.5594
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	22113653	22374232	261	0.0164
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	22378076	22383702	3	-2.5155
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	22386097	55764676	18838	-0.0018
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	55765545	55765863	2	-3.6911
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	55771252	84877190	12085	-0.0065
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	84877221	84877493	2	-4.3231
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	84886008	145736974	34781	0.0046
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	145737018	145737050	2	-3.7847
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	145737116	150900638	3482	0.0031
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	150900688	150900789	2	-3.8045
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	150901132	154433876	1706	0.0185
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	154436207	154440761	5	-2.7015
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	154442377	154835548	95	0.0538
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	Y	2710438	57427647	8588	-0.9707
