Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	61735	1510801	226	0.1003
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	1627918	1672603	15	-0.7938
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	1687587	12983506	6311	0.0201
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	13159083	13376042	13	0.5774
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	13376489	17005978	2186	0.027
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	17011450	17012456	11	-0.7177
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	17012741	17111296	39	0.3603
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	17111559	72763370	34185	0.0077
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	72768418	72811148	48	-1.517
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	72811904	81888456	5774	0.0032
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	81888602	81888605	2	-5.3162
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	81888667	104103230	14256	-0.002
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	104109238	104303403	55	0.4627
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	104303501	108729759	2874	0.0064
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	108734235	108737496	3	-3.1009
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	108739104	145257182	8157	0.0075
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	145257434	145276271	4	-1.3424
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	145276470	148585337	888	0.034
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	148627569	148636769	4	-1.3888
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	148636891	152555527	1696	0.028
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	152555706	152586594	35	1.5301
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	152590494	161496900	5464	0.0052
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	161497320	161650621	58	0.4443
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	161652302	169216937	5999	-6e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	169233974	169241766	6	-2.8877
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	169242401	174796556	3521	-5e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	174796699	174801854	16	-0.9587
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	174801872	186264063	7731	-0.001
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	186264732	186265948	2	-1.8202
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	186266076	196714873	6907	0.0022
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	196727850	196823317	98	0.3341
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	196823613	199107702	1374	0.0021
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	199111363	199111972	5	0.9431
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	199112471	208437610	6030	-2e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	208437821	208456937	32	0.6224
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	208457709	210071062	1358	0.0104
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	210081613	210082065	2	-1.8826
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	210083984	217709890	5380	-0.0014
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	217710533	217710560	2	-2.311
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	217719563	219399794	1120	0.0097
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	219402427	219402765	3	-1.1344
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	219405066	220951005	1049	-0.0105
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	220951135	220953310	2	-1.4692
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	220953777	221368178	297	-0.0086
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	221368357	221372727	2	-1.8521
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	221373167	243048740	15385	-3e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	243049874	243085556	55	0.3982
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	1	243085660	249224388	3791	0.0076
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	2	12784	3201417	2246	0.049
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	2	3202997	3203745	2	1.5061
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	2	3203852	34691069	21833	0.0073
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	2	34699315	34737057	46	0.6527
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	2	34737556	41238009	4808	0.0038
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	2	41238048	41251265	31	0.3395
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	2	41251278	46720510	4092	0.0038
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	2	46720532	46720541	2	-1.6377
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	2	46720551	52741737	4085	0.007
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	2	52743925	52781522	40	0.6505
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	2	52781542	146864443	53528	0.0015
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	2	146864457	146866934	21	-2.2678
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	2	146877806	243089456	59067	-2e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	60345	65188453	45320	0.0063
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	65189235	65210299	51	-0.6323
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	65210315	68746164	2422	0.0058
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	68746259	68747413	14	-1.4233
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	68748758	75415863	4861	-0.0031
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	75421170	75572549	62	-0.6242
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	75576561	81595080	3417	0.0116
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	81596092	81597307	3	-1.243
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	81600797	84699793	1582	0.0035
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	84699871	84702136	12	-0.594
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	84702161	129766586	24747	0.002
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	129775858	129806236	50	0.5713
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	129806924	137027960	4482	0.0064
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	137027962	137027963	2	1.7556
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	137030829	162508192	15788	-0.0018
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	162508268	162532950	17	-0.5073
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	162534730	162540490	6	-2.117
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	162545716	162623881	45	-0.3772
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	162623897	162625995	3	-1.6448
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	162626572	189360754	16655	0.0031
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	189363678	189364638	11	-0.578
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	189370988	192877902	2492	0.0093
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	192877962	192882903	19	-1.247
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	3	192886435	197896118	2701	0.0281
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	12281	5316735	2608	0.0182
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	5319786	5320934	2	-1.8237
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	5323295	9456977	2630	0.0206
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	9461230	9479345	9	1.7217
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	9486087	10223848	549	0.0059
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	10228783	10235268	32	-0.5469
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	10236142	34779054	16972	0.001
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	34786500	34824725	38	-0.5062
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	34829872	69372003	19475	0.0048
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	69374941	69485979	65	-1.9593
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	69489335	70127652	330	0.0342
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	70128412	70231799	52	-0.4046
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	70232022	77792605	4615	0.0016
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	77792720	77793778	11	0.6741
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	77793829	83668011	3723	0.0034
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	83668630	83668802	2	-3.0154
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	83672075	86975223	2084	-0.0056
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	86976094	86979764	19	-0.5272
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	86979944	91938172	3036	-0.0106
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	91938392	91938652	3	-1.4159
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	91938737	104745571	7525	0.0024
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	104751630	104751637	5	-1.0284
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	104751644	115173700	6311	0.0035
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	115175323	115184252	25	-1.6711
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	115184266	155802548	24091	0.0035
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	155803005	155803078	3	-3.2312
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	155803199	161874000	3919	0.0086
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	161880018	161884600	20	-0.6572
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	161884908	172369346	6663	0.0072
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	172374884	172377444	8	1.7121
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	172377458	172987928	401	0.0023
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	172989148	172989533	12	0.9268
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	172995979	173422522	230	-0.0082
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	173424947	173425029	2	-1.858
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	173425227	190189043	11482	0.0109
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	190195118	190199264	4	-2.4333
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	4	190199771	191027923	385	0.0405
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	15532	731891	321	0.1054
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	732903	833628	44	0.7037
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	852566	21449276	15390	0.0142
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	21451200	21452438	5	-2.3479
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	21452496	57329530	20099	0.0019
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	57329583	57333533	27	-0.5743
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	57338357	97045121	22894	6e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	97048466	97099320	43	-0.8821
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	97099684	104433422	4331	0.0127
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	104433594	104502967	45	-1.0042
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	104503937	177198449	47758	0.0046
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	177227551	177232605	3	2.1411
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	177254965	177306635	7	-0.136
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	177310337	180380203	1807	0.0225
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	180387138	180417911	15	0.5159
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	5	180418103	180790320	171	0.0606
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	149661	254283	101	0.0293
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	257353	302306	24	0.5647
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	303017	376937	73	0.2198
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	378703	380821	3	0.6787
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	381149	29871636	21532	0.003
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	29874642	29898897	11	-0.8392
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	29899677	32449050	1173	0.0246
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	32449523	32573771	35	0.8521
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	32574014	32690797	80	0.077
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	32690812	32690830	2	1.8744
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	32692227	48765972	10270	9e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	48773295	48774496	3	-1.368
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	48775249	53931151	3405	0.0037
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	53931230	53931855	6	-1.8332
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	53935348	67038046	5491	0.0217
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	67040913	67043192	7	0.8931
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	67043235	75533512	5630	0.0043
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	75534180	75534181	2	2.5351
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	75534396	77440048	1156	0.0105
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	77440094	77446199	10	-0.6644
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	77449569	78962889	988	0.0047
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	78969065	79035185	112	0.52
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	79039234	134266268	34585	0.0058
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	134269071	134269632	2	-1.8988
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	6	134272072	171051005	25113	0.0074
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	43355	3723267	1736	0.0407
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	3723362	3727599	2	-1.7752
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	3727758	24035127	15425	0.0056
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	24039878	24040383	2	1.7745
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	24040817	54380373	21374	0.0017
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	54386505	54386517	6	-2.429
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	54393488	64594065	3137	0.0227
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	64594341	64595698	5	1.6453
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	64637128	70420438	3154	0.0077
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	70423250	70426141	2	-3.0504
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	70428243	126044974	32541	0.0122
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	126045482	126046879	16	0.8239
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	126046880	142474939	10422	0.0075
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	142476719	142479722	8	-2.8085
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	142479807	142485666	13	-1.3015
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	142485699	142486045	6	-2.7321
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	7	142486115	159127004	10563	0.0194
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	8	31254	12216009	11303	0.031
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	8	12216848	12423745	100	0.3231
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	8	12438748	24974476	10410	0.0097
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	8	24974522	24984333	25	0.6826
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	8	24991104	40183797	9680	0.001
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	8	40183799	40189511	33	-0.9118
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	8	40192910	40771996	452	-0.0114
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	8	40777852	40778471	2	-2.2452
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	8	40783680	137682359	58676	0.0022
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	8	137687885	137863407	173	-0.9108
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	8	137863880	146298155	4990	0.028
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	9	46587	23361805	20425	0.0148
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	9	23363115	23373484	8	1.0575
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	9	23378488	27918516	3392	0.0069
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	9	27921443	27924051	2	-1.9705
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	9	27924178	79070461	13906	0.0108
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	9	79075652	79078413	3	-2.1501
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	9	79078673	90522594	8319	0.0057
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	9	90554151	90554219	2	-1.7736
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	9	90557957	93609577	2034	0.0056
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	9	93609668	93609773	2	-1.6339
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	9	93610132	113024442	13685	0.0027
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	9	113024789	113028169	3	-3.2805
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	9	113032431	141091394	18011	0.0091
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	72809	20840874	17014	0.0019
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	20850112	20853503	5	-1.8032
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	20853534	24377674	2199	-0.012
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	24377675	24378054	10	1.2224
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	24378908	27223903	1990	-0.0018
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	27225904	27228473	13	0.4957
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	27229993	31246510	3030	0.0046
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	31251334	31251822	12	-0.8558
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	31251885	46070052	7193	0.0062
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	46072872	46076235	5	-1.0794
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	46080336	47419711	240	0.0071
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	47541189	47652803	112	0.6717
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	47657676	67306158	12846	0.016
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	67306276	67314430	28	0.5004
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	67314446	89029243	14460	0.0042
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	89029243	89038341	2	1.9885
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	89046064	124344109	23864	0.0027
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	124344223	124346914	3	-4.746
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	10	124346978	135506704	7907	0.0199
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	11	198510	5789741	3301	0.0121
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	11	5789869	5809139	27	0.4872
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	11	5809338	22344155	12367	0.0053
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	11	22351468	22351605	2	-2.5462
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	11	22355245	51096372	18526	0.0056
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	11	51126742	51215436	14	-0.9034
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	11	51216109	55363340	372	0.037
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	11	55374032	55442318	48	0.8235
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	11	55444211	101594384	28613	0.0071
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	11	101597860	101597964	4	1.5052
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	11	101598212	134944770	23721	0.0067
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	150442	9630556	6197	0.0127
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	9633870	9728292	25	-1.7431
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	9734969	30239710	14330	0.0032
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	30239742	30243590	16	-0.6751
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	30243614	56825311	14133	0.0111
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	56825507	56826061	3	-1.7901
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	56826079	66914851	6083	0.0092
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	66915295	66920759	3	-1.3499
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	66921799	73242116	4386	0.0026
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	73245404	73245405	2	-1.7504
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	73253192	129228886	36670	0.008
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	129230513	129232545	7	-0.9388
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	129233988	132120715	2493	0.0333
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	132132584	132142331	14	0.6874
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	12	132142369	133778189	570	0.0622
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	13	19026949	115108397	64213	0.0021
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	14	19002124	19469520	37	-0.0124
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	14	19541714	19783861	17	0.9949
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	14	19784152	20200183	27	0.5301
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	14	20200381	20422583	107	1.0734
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	14	20423372	73995774	34085	0.0035
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	14	74001123	74020979	9	1.0546
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	14	74029900	106751284	20881	0.0061
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	14	106753859	106753862	2	-2.3548
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	14	106753867	106874361	56	0.1432
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	14	106879831	106952855	65	-0.3734
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	14	106958242	107153042	116	0.0794
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	14	107153067	107179847	24	0.647
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	14	107184184	107285437	69	0.1364
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	15	20016328	22285769	310	-0.141
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	15	22287270	22291024	2	2.8199
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	15	22293227	30448595	4788	0.026
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	15	30450044	30925605	109	-0.4224
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	15	30930500	76891511	29103	-6e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	15	76891627	76895198	12	-2.7037
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	15	76895344	76895775	8	-1.0821
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	15	76902179	84540181	4422	0.0134
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	15	84540717	84543550	7	-0.8943
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	15	84547277	86507717	1125	-0.0038
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	15	86508959	86521133	8	-0.9382
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	15	86521837	102469040	12088	0.0066
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	16	60777	14835067	11095	0.0169
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	16	14888595	16005568	438	0.6803
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	16	16010583	16014268	2	-0.8423
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	16	16014862	16362362	228	0.6689
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	16	16363225	18717305	1044	0.0502
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	16	18724847	18726036	2	-1.8004
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	16	18727232	32158852	7248	0.024
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	16	32158862	33927221	280	0.2898
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	16	33928639	55796510	6930	0.0025
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	16	55796575	55816705	17	1.08
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	16	55821969	78371608	14406	0.0063
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	16	78372440	78384738	16	-1.9561
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	16	78384765	90287535	10620	0.0244
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	17	526	2972646	1479	0.031
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	17	2974545	2975248	2	-1.939
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	17	2978187	20395887	10798	0.0224
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	17	20410231	20413446	2	-2.0939
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	17	20431180	39423090	8662	0.0094
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	17	39423103	39430531	19	-0.5918
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	17	39432724	78628863	23306	0.0102
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	17	78629793	78634179	2	-2.5317
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	17	78634300	81049726	960	0.0431
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	18	11543	78015057	50737	0.0062
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	19	90910	59097854	29315	0.0122
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	20	61305	69408	20	0.172
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	20	70331	73546	3	-1.699
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	20	74347	1560562	1176	0.0273
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	20	1560787	1593849	45	0.8885
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	20	1593893	62956153	41185	0.0065
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	21	10736871	48096957	24370	0.0043
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	22	16052528	16239968	31	0.6466
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	22	16240345	16281595	10	-0.1848
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	22	16350807	16425217	21	0.6192
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	22	16444867	24271692	4521	0.0574
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	22	24271745	24393745	51	0.3474
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	22	24394015	51234455	18902	0.0181
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	168477	5697701	2361	0.0216
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	5699090	5699394	2	-1.8735
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	5701177	7557246	1430	0.0208
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	7557251	7561058	4	-2.6186
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	7561105	13454227	4346	0.0094
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	13454382	13454436	2	-4.8884
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	13455706	22198581	5027	-0.0079
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	22199200	22203600	2	-3.5594
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	22203732	22464311	261	0.0164
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	22468155	22473781	3	-2.5155
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	22476176	55747951	18839	-0.0017
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	55748820	55749138	2	-3.6911
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	55754527	84990534	12094	-0.0064
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	84990565	84990837	2	-4.3231
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	84999352	145929282	34758	0.0057
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	145929326	145929358	2	-3.7847
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	145929424	151149982	3480	0.0032
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	151150032	151150133	2	-3.8045
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	151150476	154780682	1707	0.0187
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	154783013	154787567	5	-2.7015
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	X	154789183	155182354	95	0.0538
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_C09_845272	Y	2650438	59018259	8632	-0.9709
