Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	3218610	47502335	23209	0.4682
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	47502483	47503322	2	1.8165
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	47503675	49506582	1326	0.5042
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	49509178	49538711	14	0.9491
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	49541827	70091499	13309	-0.1187
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	70092040	70092051	2	-1.4985
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	70092319	85979932	9235	-0.1159
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	85980350	86003166	11	0.8594
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	86006009	97253193	6914	-0.1079
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	97255317	97568705	175	0.4684
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	97569367	120527361	13313	-0.1194
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	149881398	155180360	2473	1.0104
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	155212267	165036995	6210	0.1629
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	165045465	165045554	2	-1.2491
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	165046515	181152394	10410	0.1866
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	181153434	181153609	2	-1.365
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	181153875	204232537	13952	0.1742
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	204232972	204411063	151	-0.065
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	204411370	217911980	8963	0.1758
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	217919152	217919170	2	-1.843
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	217922510	230603822	7723	0.1712
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	230606103	230606178	2	-1.3896
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	230614110	233232858	1787	0.1533
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	233233557	233234188	2	-1.0291
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	233234531	236086474	1906	0.1632
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	236091941	236092155	2	1.2267
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	236092846	240818648	3673	0.1357
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	240820516	240820759	2	-2.6285
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	1	240825300	247813706	3763	0.1418
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	2	484222	45939065	26816	0.035
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	2	45943900	45986619	53	0.5689
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	2	45989023	73344586	15593	0.0292
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	2	73350403	73392069	23	0.388
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	2	73392956	142669938	31221	-8e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	2	142670217	142866617	122	0.3578
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	2	142867498	208994697	36669	-0.0477
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	2	208994927	242476062	19924	-1.3207
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	3	2212571	65492899	36787	0.2401
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	3	65501006	65512134	13	-0.5888
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	3	65517413	197538677	69151	0.2369
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	4	1053934	3009132	724	0.1753
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	4	3010609	3131573	68	0.6626
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	4	3132697	35442725	20237	0.2039
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	4	35443688	35444338	2	1.4909
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	4	35450987	90333929	28346	0.2208
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	4	90336433	90406142	40	-0.1319
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	4	90407720	91114979	343	0.2862
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	4	91115861	91269682	123	-0.1316
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	4	91270127	109718512	9975	0.2282
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	4	109718593	109722756	2	-1.1844
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	4	109725373	188763651	42406	0.226
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	5	914233	45378456	25827	0.6848
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	5	50124856	143721209	51499	-0.2045
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	5	143725150	143725543	2	-1.9279
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	5	143728091	180360469	22640	-0.222
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	6	1014281	62234537	33799	0.5182
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	6	62236967	64242259	910	-0.656
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	6	64248143	64255987	5	0.4679
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	6	64257062	65571798	653	-0.6389
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	6	65579073	66237418	315	0.5057
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	6	66245983	66423054	100	-0.662
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	6	66425799	66555933	89	0.5349
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	6	66564806	66653619	65	-0.6185
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	6	66660054	66755074	54	0.4793
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	6	66755916	69736293	1751	-0.635
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	6	69736777	70373346	309	0.5193
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	6	70388022	157719164	50973	-0.6218
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	6	157724008	157740657	4	-2.4563
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	6	157746358	158086912	99	-0.6791
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	6	158087222	158090743	4	-2.1775
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	6	158092648	170903919	6789	-0.6744
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	7	705284	17059174	8336	0.5061
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	7	17799600	140443991	63672	0.2368
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	7	140444008	140483231	48	0.5268
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	7	140483282	158385118	8930	0.2437
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	8	617667	3304920	1253	-0.719
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	8	3305031	3305112	2	-2.6049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	8	3307014	21640671	10724	-0.6801
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	8	21650197	21650993	2	-2.493
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	8	21662147	27886235	4053	-0.6684
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	8	27886297	27886700	2	-4.4081
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	8	27887562	33923578	3728	-0.6681
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	8	33924633	48163424	5066	0.4199
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	8	48239172	48895624	281	-0.1779
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	8	48899183	145232496	56012	0.4073
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	9	789932	38747688	23227	0.7184
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	9	71039044	131724212	39919	-0.6122
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	9	131726945	140938752	4501	0.1627
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	10	415240	3265396	1390	0.5401
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	10	3266295	3308014	43	0.9494
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	10	3308318	3308452	3	-0.0953
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	10	3308716	6393610	2446	0.7303
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	10	6398978	6398984	5	-0.0059
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	10	6404210	6670747	258	0.6249
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	10	6845673	6859144	14	1.2221
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	10	6859844	8462518	1339	0.5827
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	10	8468897	13048812	3355	0.2781
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	10	13049081	13948156	767	0.8041
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	10	13950781	14177928	245	0.5095
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	10	14178716	14284445	81	0.2191
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	10	14284474	14284593	3	1.4898
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	10	14284606	15282689	748	0.4453
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	10	15286690	20241401	3322	-0.1598
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	10	20243642	56608508	18275	0.214
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	10	56696068	83350946	15543	-0.6362
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	10	83351151	83351242	2	-3.5841
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	10	83357924	124259694	26185	-0.6414
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	10	124260739	124261348	2	-3.623
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	10	124261413	135225087	6354	-0.686
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	11	456120	3745165	1089	0.1428
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	11	3745591	3840691	53	0.4337
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	11	3840959	70517504	35716	0.1679
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	11	70517927	70522627	4	-0.866
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	11	70522789	71281860	528	0.16
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	11	71282968	71286820	7	-0.6883
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	11	71288172	75239564	1893	0.1499
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	11	75239903	75349908	70	0.4622
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	11	75352280	95758097	12272	0.1872
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	11	95762965	95825774	71	0.4002
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	11	95825787	134142530	25236	0.1805
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	12	889902	54563595	27682	-0.1507
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	12	54566689	54634105	34	0.4645
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	12	54635343	89687117	20732	-0.1216
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	12	89690143	90035732	162	0.2015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	12	90036335	133161346	24992	-0.1324
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	13	19450806	32475150	7822	0.2451
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	13	32476675	32518071	22	-0.6578
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	13	32520583	45586038	8556	0.2519
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	13	45587825	48803727	2066	-0.6032
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	13	48806510	48879935	44	-3.4695
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	13	48879957	49052846	218	-2.1942
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	13	49053039	49520970	353	-3.9758
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	13	49521513	49958098	163	-2.6795
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	13	49961137	50494584	255	-3.8425
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	13	51624282	100366471	27296	-0.6097
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	13	100369359	114987458	9489	0.2486
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	14	20501368	20511107	3	-0.0497
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	14	20511673	78016474	32053	-0.6296
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	14	78017326	105988038	17096	0.22
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	15	23687685	25800728	1025	-0.178
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	15	25802044	35763444	4084	-0.6545
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	15	35763657	35763784	2	-2.5229
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	15	35764133	43090520	4478	-0.6095
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	15	43093806	86761347	25322	0.2351
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	15	86764487	86769743	9	-0.4839
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	15	86771919	101884307	9419	0.2138
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	16	653459	1863520	276	-0.6662
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	16	1866664	1872459	2	-2.4943
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	16	1872905	5577589	1660	-0.6665
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	16	5625681	11720066	4001	1.0092
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	16	11732244	11755840	17	1.617
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	16	11756617	13987719	1756	1.2521
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	16	13989121	14070525	54	2.165
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	16	14075295	14405892	200	1.6472
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	16	14409881	14497450	21	0.4367
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	16	14499163	20239862	909	-0.1492
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	16	20242614	31850299	4946	0.8647
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	16	46507665	82404893	22715	-0.6563
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	16	82405196	82541523	165	-0.1438
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	16	82543378	89379936	3844	-0.7021
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	17	987221	29410705	11349	0.1718
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	17	29413508	29614514	82	-0.1207
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	17	29616001	60928354	15247	0.2037
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	17	60939184	60997942	35	0.4832
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	17	60999052	80917016	10171	0.209
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	18	329586	4002786	1666	0.1951
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	18	4005295	4019781	11	-0.6574
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	18	4021899	77109240	40774	0.183
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	19	284018	45748244	18594	0.1593
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	19	45748354	45749255	2	-1.4863
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	19	45756376	58878226	5301	0.1495
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	20	455764	62219837	37168	0.2037
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	21	15347621	47678774	20498	-0.1317
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	22	17423930	49331012	16811	-0.6945
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	X	3157107	50638685	21157	0.0075
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	X	50638783	50639531	2	3.2008
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	X	50640971	86494513	12137	-0.0285
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	X	86497529	86497820	2	-1.5618
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D09_1230954	X	86498506	154905589	30105	-0.0019
