Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	1	3208470	245880329	128351	0.2408
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	2	474222	21337060	13427	0.5165
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	2	21338596	21339138	2	-1.199
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	2	21340163	27707077	3285	0.5216
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	2	27707873	80431432	29478	0.072
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	2	80431502	80432698	3	-1.0315
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	2	80433515	105677224	9378	0.14
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	2	105677612	105677780	2	-1.1271
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	2	105682866	134512772	13663	0.1164
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	2	134523113	134533743	9	-0.698
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	2	134542477	158759558	13566	0.1074
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	2	158763170	158768164	4	-1.6717
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	2	158768995	213852492	30646	0.1196
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	2	213884333	242124735	16988	-0.5441
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	3	526235	199023074	105796	0.1472
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	4	1043934	5635424	2168	0.1307
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	4	5635746	47763583	25712	-0.533
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	4	52393514	112431655	33228	0.0779
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	4	112432291	112436250	2	-1.8577
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	4	112437259	129206324	9294	0.0341
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	4	129209892	129209924	2	-1.1219
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	4	129213096	151769653	11912	0.0388
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	4	151832411	189836143	19685	0.3553
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	5	967233	45414213	25781	0.1232
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	5	50160613	175643161	71780	-0.5098
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	5	175643301	180293075	2005	0.0821
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	6	959281	106889778	58130	0.1881
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	6	106891067	106898070	7	-0.5507
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	6	106898902	107016426	82	0.2772
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	6	107018376	117045589	5943	-0.5207
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	6	117051250	121443611	2221	0.209
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	6	121452172	122184187	341	0.6921
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	6	122190619	127479269	3040	0.223
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	6	127479310	130704689	2067	0.7415
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	6	130706341	131594664	611	0.1906
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	6	131605842	134620456	1983	0.6722
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	6	134624037	136212969	1074	0.2091
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	6	136217891	140134322	2513	0.7198
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	6	140137205	140686984	294	0.2114
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	6	140692520	141002052	76	0.7203
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	6	141006001	144908460	2136	0.232
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	6	144917666	169510312	14826	-0.535
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	6	169510667	170745844	500	0.2079
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	7	671810	158077879	80885	0.2025
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	8	607667	5234930	2528	0.1851
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	8	6195127	6812822	557	0.6661
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	8	8293996	10483517	1145	-0.4935
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	8	10543645	11686478	807	0.2287
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	8	12606826	17071334	3117	-0.5203
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	8	17071836	17076284	3	-2.0378
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	8	17076986	31738766	10091	-0.496
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	8	31741567	35377501	2137	0.2684
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	8	35377596	35419118	24	0.8072
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	8	35423881	47583230	4101	0.4583
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	8	47584608	71117230	13303	0.0661
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	8	71117259	71117274	2	-1.3373
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	8	71117388	109180524	21347	0.0554
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	8	109181754	109183477	2	-1.581
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	8	109184248	145304484	21804	0.0624
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	9	779932	140058573	67608	0.0104
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	10	405240	19392650	13388	0.2053
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	10	19396249	30848861	7587	-0.5077
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	10	30849194	30851646	3	-2.3837
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	10	30851717	36323016	3390	-0.511
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	10	36323079	36326452	3	-1.8334
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	10	36328024	39104006	1509	-0.501
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	10	42267976	83434610	21939	0.1998
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	10	83434882	125928885	27173	-0.5123
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	10	125930456	125932576	2	-6.0661
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	10	125934523	135075077	5189	-0.5331
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	11	446120	55771355	30211	-0.5089
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	11	55773069	118912856	36317	0.1858
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	11	118913214	118913230	2	-1.2344
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	11	118914006	133647740	10171	0.1826
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	12	760163	33412374	19458	0.2257
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	12	36946731	39827270	1340	-0.5185
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	12	39827997	39828599	2	-1.8751
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	12	39828628	131671419	52539	-0.4723
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	13	18348806	33247053	9084	0.1783
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	13	33248212	47687698	9295	-0.5904
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	13	47692009	47963224	270	-1.5293
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	13	47963566	48062213	57	-2.9043
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	13	48063054	49392585	712	-0.4816
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	13	50522283	114005560	36777	0.1663
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	14	19571208	76054022	31415	0.1632
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	14	76055163	76059442	2	-3.3101
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	14	76061120	105059083	17743	0.1187
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	15	21238778	61319112	22367	0.1146
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	15	61328461	61520316	134	0.6396
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	15	61520394	99701830	21787	0.1231
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	16	593460	31753198	13817	0.0753
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	16	31757800	64623414	12692	-0.4473
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	16	64623768	64623991	2	-1.9914
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	16	64624922	70434964	2569	-0.4047
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	16	70440145	70506829	31	-0.8838
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	16	70509346	87907437	11424	-0.4583
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	17	933971	13261280	6827	-0.0403
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	17	13262290	13263050	3	-1.3869
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	17	13263055	30994795	6642	-0.0513
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	17	30995321	31007477	10	-0.9067
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	17	31008104	78510305	23319	-0.1052
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	18	319586	21850340	11079	0.919
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	18	21858584	22380453	270	1.2146
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	18	22380753	22390915	5	0.5604
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	18	22391270	26365417	2368	-0.5458
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	18	26367543	29613760	2085	0.1611
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	18	29628092	75210228	26464	-0.526
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	19	235018	19052295	7279	-0.468
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	19	19053052	51595206	11697	0.2305
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	19	51598837	51602967	2	-1.499
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	19	51603022	59198173	2786	0.2448
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	19	59198194	59225132	14	-0.2352
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	19	59227955	63570038	2054	0.218
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	20	403764	54207970	32210	0.301
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	20	54209089	54209647	4	-0.6429
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	20	54210180	61690281	4910	0.3385
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	21	14269492	34001702	12437	0.1375
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	21	34002909	45055114	7438	-0.5077
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	21	45064546	46503202	558	0.1879
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	22	15803930	39587153	11442	0.0134
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	22	39589170	39942359	323	-0.7271
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	22	39942396	39949172	2	-5.4164
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	22	39949296	41455072	609	-0.7421
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	22	41456492	41460223	2	-5.7179
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	22	41460342	47717016	4379	-0.8584
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	X	3167107	18055494	6066	0.0108
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	X	18062606	18066902	5	-1.3722
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	X	18067244	50655425	15000	-0.0166
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	X	50655523	50656271	2	2.6863
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	X	50657711	81136779	9669	-0.0098
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	X	81137590	81151439	5	-1.9319
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	X	81156343	112352405	13432	0.0025
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	X	112353571	112353767	3	-1.6108
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	X	112355557	116073315	1523	-5e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	X	116074101	116074699	2	-1.5129
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	X	116075065	118851204	1499	0.0307
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	X	118852219	118852430	2	-3.2306
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D11_1230932	X	118852467	154558783	15936	-0.0011
