Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	51598	225801	27	0.302
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	346306	346405	2	1.5037
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	394034	17050552	8782	-0.0049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	17055024	17133835	58	0.3775
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	17133850	25455928	5271	2e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	25465715	25519331	26	0.524
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	25519533	32673435	3599	0
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	32673827	32678394	3	-2.3717
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	32687231	72522941	25079	0.0012
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	72528701	72535958	9	-2.9819
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	72541006	72583736	48	1.6706
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	72584492	103960907	20010	0.0106
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	103965022	104069745	27	0.9938
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	104104926	105814899	912	0.003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	105820728	105823898	17	0.7278
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	105825578	110027527	2645	0.0165
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	110027663	110047801	32	0.5015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	110047804	143553915	7199	0.0078
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	143560896	143579717	5	1.3461
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	143580441	149614149	2047	0.0491
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	149614324	149614444	2	-1.6657
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	149614679	151017861	925	0.0129
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	151021254	151035324	45	-0.3071
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	151040529	157133197	3617	0.0074
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	157135125	157136383	2	1.7318
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	157141442	194977690	25805	0.0051
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	194977810	195068428	92	0.3786
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	195068473	243703033	33603	0.0013
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	243703662	243713527	11	-0.9937
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	1	243716274	247191011	2205	0.0289
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	2	2784	34534998	24034	0.0022
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	2	34536794	34590667	50	-0.4567
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	2	34591060	52607972	12993	0.009
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	2	52607984	52635046	39	-2.209
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	2	52641453	57248406	3341	0.0179
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	2	57255548	57295427	68	1.0113
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	2	57298975	242738129	109013	0.0051
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	3	35345	46024712	32637	0.0128
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	3	46024840	46026717	2	-2.1372
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	3	46026747	68828949	15057	0.0118
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	3	68828974	68830103	13	0.7652
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	3	68831448	75651239	4921	0.0018
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	3	75655239	75669495	6	-2.3204
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	3	75677871	150445666	41643	0.0084
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	3	150446085	150450811	25	-0.5985
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	3	150453770	163995433	8313	0.0041
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	3	163995786	164109266	69	0.5434
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	3	164109297	166523557	1315	0.0272
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	3	166524242	166564633	65	-0.7474
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	3	166568123	170153324	2008	0.0287
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	3	170153687	170154427	2	-1.178
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	3	170155593	194363281	15737	0.009
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	3	194363420	194365597	11	1.282
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	3	194369129	196311191	1302	0.0017
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	3	196314144	196315157	3	-0.9233
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	3	196319021	196767187	180	0.0207
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	3	196868323	196941179	29	-0.3497
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	3	196941532	199380515	1187	0.0075
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	4	2281	9819488	5790	0.0019
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	4	9832514	9840596	28	-1.77
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	4	9843312	9844366	7	-0.4647
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	4	9845240	9996071	169	-0.0209
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	4	9999220	10011862	21	0.418
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	4	10012096	34455370	16749	0.0026
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	4	34455399	34515387	51	0.2991
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	4	34517690	44663252	6575	0.012
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	4	44663360	44706019	45	0.6109
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	4	44707938	64376535	9902	0.0123
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	4	64380064	64390853	28	-1.2112
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	4	64399026	69054598	2857	0.014
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	4	69057536	69219747	70	0.5142
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	4	69222620	138311689	40862	0.0088
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	4	138311870	138312864	14	-2.4465
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	4	138314408	156021998	10814	0.0048
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	4	156022455	156022528	3	1.04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	4	156022649	158780590	1837	-0.0081
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	4	158780797	158781173	4	-1.1067
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	4	158781309	162100162	2067	0.0106
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	4	162100262	162104358	12	-0.6728
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	4	162104369	172605921	6648	0.0086
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	4	172611459	172614019	8	1.5546
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	4	172614033	173225799	400	-0.0094
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	4	173225875	173226080	7	0.8166
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	4	173226094	191261904	12070	0.0203
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	5	68532	859336	349	-0.0205
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	5	862047	886628	17	0.5886
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	5	905566	8765548	6590	6e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	5	8765561	8796744	29	0.314
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	5	8799981	12853889	3195	0.0056
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	5	12868780	12873076	9	-1.3139
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	5	12877411	16175588	2225	0.0199
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	5	16176847	16178214	5	-0.7458
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	5	16180544	21486957	3301	0.0236
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	5	21487034	21488195	4	1.1507
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	5	21488253	46306865	14972	0.0085
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	5	46307687	46309259	6	1.3784
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	5	46313969	57357403	5065	0.0133
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	5	57361784	57376901	36	-0.4573
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	5	57377877	68882059	7259	0.0093
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	5	68903050	69153891	5	-0.8937
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	5	69269183	103879120	19469	0.0109
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	5	103888272	103888503	4	-1.2341
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	5	103888948	117416321	9364	0.008
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	5	117416509	117416984	10	-0.5835
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	5	117432239	180307129	40564	0.0043
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	5	180311316	180350709	19	-1.9588
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	5	180365831	180722926	170	-0.0087
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	6	94661	199283	101	0.0929
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	6	202353	326149	101	0.3088
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	6	327559	31394510	22179	0.0059
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	6	31395090	31395480	3	-1.7537
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	6	31403385	54039110	14293	0.0056
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	6	54039189	54039814	6	-1.5197
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	6	54043307	66456203	5039	0.0274
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	6	66456258	66460573	23	-0.4988
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	6	66463848	67094767	413	0.0115
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	6	67097634	67100079	9	0.5541
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	6	67100148	74648586	4993	0.0063
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	6	74648953	74658138	10	0.7782
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	6	74660283	77071668	1463	0.0101
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	6	77073620	77073646	3	-1.1116
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	6	77073713	79019608	1289	0.023
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	6	79025784	79091904	112	-0.3818
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	6	79095953	103841518	15418	0.0156
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	6	103841522	103868754	47	0.7161
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	6	103872163	110501599	4215	0.0083
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	6	110503369	110519930	17	-0.9614
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	6	110522121	170892930	39821	0.007
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	7	52911	61311022	40549	0.0087
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	7	61365842	61477970	31	-0.5445
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	7	61479241	102631569	22257	0.0108
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	7	102632199	102632327	2	-1.316
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	7	102637962	107960359	3520	0.0058
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	7	107963577	107964211	2	-1.2465
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	7	107966754	109221034	792	0.0025
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	7	109224328	109225010	16	-0.7211
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	7	109228153	109228480	9	0.0803
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	7	109228865	109241146	10	-2.2605
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	7	109241218	125832210	10002	0.0106
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	7	125832718	125834112	13	-1.1627
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	7	125834113	133435735	4698	0.0023
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	7	133435751	133435917	4	0.6974
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	7	133435957	133440046	14	0.2891
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	7	133440505	133446174	6	0.8473
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	7	133446205	143497465	6539	0.0041
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	7	143500401	143697880	51	0.2823
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	7	143705862	146642321	1839	0.0249
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	7	146642620	146643014	2	-1.2433
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	7	146645931	152778571	3719	-0.0017
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	7	152778578	152778645	2	-2.4574
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	7	152778648	158819765	4097	0.0087
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	8	21254	103380	4	1.2395
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	8	148062	7237790	7822	0.0307
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	8	7241701	7836800	148	-0.3227
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	8	7847301	8015597	47	0.0414
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	8	8027373	8027445	2	-1.7221
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	8	8027704	12278622	3260	0.0099
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	8	12278669	12291857	32	-0.5394
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	8	12305298	13227830	668	-0.009
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	8	13227897	13228048	2	-2.2947
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	8	13228710	146268959	83626	0.004
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	9	36587	11827866	11114	0.0284
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	9	11829399	11829805	2	-1.567
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	9	11829832	11917110	44	0.0821
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	9	11919504	11924377	9	-0.8965
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	9	11931913	23351805	9197	0.009
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	9	23353115	23363484	8	0.9998
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	9	23368488	24789842	1020	0.0141
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	9	24789940	24806718	22	0.3006
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	9	24807675	45258766	9987	0.0123
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	9	45264474	66222057	75	0.2626
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	9	66258425	140211215	48168	0.0033
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	10	62759	24417681	19163	0.007
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	10	24417682	24418060	9	-2.0476
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	10	24418914	45572092	12267	0.0031
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	10	45573051	46790324	184	0.2653
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	10	46790374	66976282	12957	0.0116
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	10	66977929	66984452	28	-1.4308
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	10	66992801	88966577	14450	0.0013
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	10	89019223	89028321	2	1.6923
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	10	89036478	135356694	31749	0.0034
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	11	188510	5746177	3299	0.007
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	11	5746301	5765715	29	0.4003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	11	5765914	18894043	9381	0.0028
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	11	18894208	18932028	82	0.243
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	11	18934236	24398750	4332	0.0058
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	11	24400825	24404824	5	-0.9899
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	11	24406833	49664951	16630	0.0106
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	11	49667437	49714343	20	-0.5826
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	11	49714849	50300418	292	0.0203
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	11	50300601	50301966	4	1.1629
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	11	50313632	51040151	84	0.0269
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	11	51040270	51051627	4	-1.097
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	11	51061717	51326661	104	0.1572
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	11	51331021	51331424	2	-1.3714
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	11	51336313	55130624	271	0.1084
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	11	55130764	55196566	45	0.5942
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	11	55198894	70959508	8307	0.0023
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	11	70960616	70964468	7	-0.9301
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	11	70965820	99344899	18817	0.0078
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	11	99348556	99348572	2	-1.3874
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	11	99348812	101099594	1448	-0.0109
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	11	101103070	101103174	4	1.2158
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	11	101103422	123756361	15600	0.0015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	11	123759570	123773533	18	0.4843
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	11	123774798	134449982	8074	0.0036
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	12	20703	9521823	6198	-0.0037
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	12	9525137	9619559	24	-1.4874
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	12	9626236	9626953	3	-0.4533
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	12	9627923	9637045	16	0.3534
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	12	9637364	10033835	312	-0.0161
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	12	10034164	10034765	2	1.1286
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	12	10034870	11112094	708	0.0311
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	12	11113635	11132799	10	-1.284
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	12	11143141	11395358	132	0.0312
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	12	11402844	11434673	32	0.4531
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	12	11443459	31029585	13900	0.0059
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	12	31030536	31037801	10	-0.6019
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	12	31037902	33185927	1452	0.0083
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	12	33192673	33195133	20	-0.7384
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	12	33195850	132288262	62003	0.0061
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	13	17924949	114126499	64026	0.0086
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	14	18072124	18405751	23	0.0465
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	14	18452209	19492423	166	-0.2677
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	14	19493212	32860957	8560	0.0069
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	14	32861738	32865564	2	-1.3394
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	14	32865761	51059356	11163	0.0114
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	14	51060077	51063978	3	-1.1862
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	14	51065581	73070876	14286	0.0041
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	14	73076460	73099653	9	-1.4866
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	14	73099668	105531947	20733	0.0023
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	14	105550720	105550986	2	1.3773
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	14	105553173	105618552	29	0.1074
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	14	105619258	105632486	8	0.8569
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	14	105638145	105788401	68	0.0882
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	14	105791639	105798514	7	0.764
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	14	105799207	105934566	61	0.0827
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	14	105934569	105989139	57	-0.5448
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	14	105989153	106356482	225	0.0476
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	15	18276341	22202157	1419	-0.0043
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	15	22214855	22265932	39	0.4084
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	15	22265951	29251940	4069	0.0089
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	15	29252174	29253123	2	-1.4751
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	15	29253544	63601155	22191	0.0046
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	15	63603995	63605440	3	-1.5725
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	15	63609587	74665417	6533	0.0023
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	15	74678296	74682830	22	1.0599
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	15	74689234	84565491	5753	0.0099
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	15	84566382	84570747	8	-1.0665
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	15	84572923	100286563	11877	0.0056
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	16	777	5571167	2658	-0.0066
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	16	5571227	5591842	27	-1.108
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	16	5594041	32021183	17363	0.0058
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	16	32021186	32562471	100	0.3006
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	16	32562530	33004923	54	0.0708
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	16	33009105	33550900	92	0.3462
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	16	33551523	57399752	8819	-0.0038
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	16	57400465	57400605	2	-1.571
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	16	57404352	72962692	9440	-0.001
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	16	72964513	72964880	3	-1.0623
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	16	73009537	76929109	3193	0.0017
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	16	76929941	76942239	16	0.4742
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	16	76942266	88815036	10611	-0.0059
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	17	526	18299674	11418	5e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	17	18302411	18405946	26	0.5424
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	17	18409922	36676540	9487	0.0042
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	17	36676552	36684057	23	-0.593
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	17	36686250	41477319	2476	0.0061
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	17	41484032	42107479	202	0.2641
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	17	42120174	73906135	19286	-1e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	17	73907151	73907229	2	-1.8688
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	17	73907451	78643088	2279	-0.0109
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	18	1543	357119	198	0.0209
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	18	357725	386461	32	-0.9856
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	18	388147	38305676	23754	0.0078
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	18	38310567	38312393	26	-0.5303
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	18	38314935	67961238	20607	0.0078
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	18	67964857	67966871	3	-1.1459
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	18	67968182	74761681	5289	0.0186
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	18	74763702	74765851	5	-1.0903
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	18	74767437	76116029	701	-0.0108
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	19	41910	21606759	9674	0.0041
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	19	21607480	21611709	2	-1.8131
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	19	21611951	59414087	16997	-0.0027
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	19	59422014	59433131	17	-0.7853
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	19	59445152	63789666	2611	-0.0091
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	20	9305	1509580	1203	2e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	20	1509667	1547078	46	-0.5055
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	20	1547142	62426597	41125	0.0058
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	21	9758742	46921385	24325	0.0059
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	22	14432528	17053357	1214	0.0202
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	22	17112919	17150527	5	-1.0462
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	22	17161546	41243864	16194	-0.0019
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	22	41244918	41248655	3	-1.4171
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	22	41248873	49581321	6101	7e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	X	108477	75102294	39261	5e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	X	75102642	75106177	5	-2.6776
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	X	75106436	137400336	33975	0.004
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	X	137400394	137400511	2	-5.0163
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	X	137400671	139320991	1199	3e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	X	139324076	139328860	6	-1.6393
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	X	139332400	148983310	6476	0.0106
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	X	148983457	148983890	3	-2.5215
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	X	148984674	154835548	3111	-0.0221
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	Y	2710438	22723666	7465	-0.8476
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	Y	22725068	22725077	2	0.851
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D12_1231036	Y	22725664	57427647	1120	-0.8207
