Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	61735	15489682	7978	0.0082
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	15489799	15489862	2	-1.2404
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	15489931	16803776	713	0.0087
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	16804341	17005776	63	0.3402
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	17005978	17012741	13	-0.4408
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	17012785	25583341	5372	0.0052
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	25593128	25662212	31	0.6495
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	25663310	54434610	15618	0.0053
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	54435043	54440228	3	-1.2333
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	54448089	72768916	13145	0.0037
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	72768936	72817021	49	-0.7111
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	72818599	104159384	19997	0.0028
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	104163499	104268222	27	-0.8094
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	104303403	106019205	912	0.0078
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	106019236	106024070	18	0.6451
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	106024090	108766355	1949	0.0034
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	108769302	108817179	2	-2.4018
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	108828957	110227515	702	-0.0036
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	110232974	110240178	17	-0.5786
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	110242953	112690211	1952	0.0231
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	112690248	112705956	28	0.3203
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	112706060	144957688	5296	0.0127
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	144957815	145080051	46	-0.3048
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	145083864	149242725	1122	0.0885
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	149243072	149245189	7	0.7767
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	149246030	149429206	44	0.2383
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	149436842	149578722	8	-0.5784
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	149617451	152555527	1481	0.0227
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	152555706	152586238	31	-1.5638
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	152586278	158866573	3829	0.0063
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	158868501	158869759	2	1.3376
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	158874818	161479438	1641	0.0169
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	161496900	161648237	56	0.303
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	161648621	169216937	5991	-0.0022
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	169233974	169241766	7	-2.4615
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	169242401	196731035	18119	0.0038
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	196731610	196758149	36	-0.464
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	196758159	196789057	15	-0.0712
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	196789082	196901753	106	-0.8584
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	1	196905159	249224388	35757	0.0069
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	2	12784	34691069	24037	0.0037
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	2	34699315	34737057	46	-0.4501
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	2	34737163	41238235	4807	0.0038
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	2	41238443	41238673	6	-1.0012
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	2	41238810	49522898	5900	-6e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	2	49533042	49541190	6	-1.2758
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	2	49545041	97783911	26250	0.0094
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	2	97784139	97918405	52	0.3296
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	2	97918717	114362015	9441	0.0045
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	2	114362414	114380821	3	-1.244
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	2	114383552	172448479	35448	0.0068
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	2	172451719	172451732	2	-1.319
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	2	172452905	178763911	4091	0.0041
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	2	178767957	178768501	2	-1.5882
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	2	178768683	194687745	9302	0.0123
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	2	194690304	194693798	2	1.5442
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	2	194702314	208354955	8062	0.007
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	2	208355178	208359336	16	-0.5778
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	2	208359476	243089456	22066	0.002
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	60345	26598888	19980	0.0141
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	26601100	26614985	26	0.4297
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	26615949	37977417	7576	7e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	37982108	37986928	18	-0.7842
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	37987106	53022924	8059	0.0051
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	53022949	53041499	48	0.242
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	53041519	65188453	9529	0.0077
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	65189235	65199702	31	-0.5659
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	65199867	65203532	6	0.3947
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	65203538	65210452	16	-0.5736
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	65216349	66942652	1198	-0.0092
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	66942667	66957313	12	-0.4665
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	66957468	68746164	1208	0.0066
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	68746259	68747413	14	-0.73
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	68748758	75531200	4907	-0.0019
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	75532431	75894532	100	0.2622
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	75901451	84102222	4595	-0.0022
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	84105433	84106166	2	-2.2436
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	84110967	98944476	6300	0.0053
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	98944511	98949056	25	-0.6426
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	98949069	129760622	18702	0.0031
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	129761124	129868734	80	0.4493
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	129871535	162714517	20332	0.0079
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	162717727	162719562	2	-3.0858
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	162726159	166386699	2086	0.0313
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	166391141	166391464	2	-1.2648
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	166393577	175883749	5974	0.007
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	175888059	175914479	33	-0.8069
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	175916221	190256086	9115	0.0088
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	190260037	190260695	3	-1.1193
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	190260915	190292004	31	-0.0384
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	190292028	190292102	2	-1.1579
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	190293435	192877902	1796	0.0051
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	192877962	192882903	19	-0.8038
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	192886435	192886760	8	0.269
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	3	192886861	197896118	2693	0.0179
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	4	12281	10198916	5763	0.009
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	4	10198967	10244955	74	0.2691
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	4	10245898	34778860	16926	-0.0011
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	4	34778962	34829872	45	0.3041
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	4	34829913	49267848	8950	0.0078
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	4	49291192	52685699	25	0.4054
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	4	52685993	69372003	10443	0.0042
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	4	69374941	69485979	64	-1.3049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	4	69489335	161880712	55604	0.0044
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	4	161880812	161884600	11	-0.7586
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	4	161884908	172369346	6651	0.0049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	4	172374884	172377444	8	1.1933
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	4	172377458	173422341	639	0.0205
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	4	173422522	173441132	9	0.5561
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	4	173453708	180093706	4110	0.0038
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	4	180097988	180098338	2	-1.819
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	4	180101922	189221258	6541	0.0158
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	4	189221360	189221424	3	1.156
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	4	189221439	191027923	1176	0.0609
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	5	15532	46271930	30701	0.0079
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	5	46272521	46273502	5	-1.723
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	5	46278212	57321646	5064	6e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	5	57326027	57341144	36	-0.3534
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	5	57342120	68846303	7257	0.0045
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	5	68867294	69118135	5	1.1776
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	5	69233427	118953695	29860	0.0068
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	5	118959946	118961621	5	-1.3341
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	5	118964137	177198449	37737	0.0048
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	5	177227551	177232605	3	2.4687
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	5	177254965	180374523	1808	0.0165
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	5	180378710	180418103	19	0.7212
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	5	180433225	180790320	169	0.0462
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	149661	254283	101	0.0519
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	257353	329869	38	-0.4014
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	330704	19040119	14626	0.0065
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	19042181	19044869	8	-0.8129
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	19044898	26739025	5464	0.0073
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	26742099	26742494	2	-1.474
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	26752036	26798175	21	-0.1868
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	26798260	26904759	30	0.3706
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	26904828	29837188	1404	0.0155
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	29837314	29850196	15	-0.8937
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	29850274	31286305	673	0.008
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	31286531	31296451	9	-0.8078
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	31309924	31348200	48	0.0514
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	31348470	31348648	3	1.6332
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	31351035	32690027	569	0.0096
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	32690797	32690830	3	1.6937
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	32692227	52611118	12668	0.0059
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	52611384	52664572	54	0.2228
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	52665539	53931084	944	-0.0018
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	53931151	53931855	7	-1.1835
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	53935348	65336942	4341	0.0203
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	65347544	65348992	2	-1.8893
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	65350776	78962626	8897	0.0073
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	78962874	79035174	114	0.3834
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	79035185	97804134	11840	0.0118
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	97804910	97810951	3	-1.0956
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	97811437	121265141	14355	0.0062
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	121265501	121266380	2	-1.5658
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	121267071	134266268	8281	0.0064
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	134269071	134269632	2	-2.1329
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	134272072	161032565	17801	0.0039
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	161032719	161033283	5	1.4421
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	6	161068042	171051005	7243	0.0177
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	7	43355	29668591	21400	0.0131
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	7	29670718	29690059	10	-0.79
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	7	29691083	38294101	5931	0.0025
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	7	38294996	38404387	128	0.258
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	7	38404971	97401932	33073	0.0102
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	7	97401959	97402475	7	-1.0003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	7	97404240	126260750	16801	0.0127
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	7	126261849	126262856	2	-1.75
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	7	126262995	141863005	9850	0.0054
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	7	141864170	141864499	2	-2.4963
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	7	141866502	143218858	900	0.0525
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	7	143218968	143408430	33	0.3984
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	7	143425378	143431034	17	-0.8829
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	7	143444216	143568059	51	0.5414
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	7	143572166	143931078	277	-0.0101
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	7	143931103	143977056	12	-0.68
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	7	143977353	154874917	6869	0.0116
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	7	154879939	154881336	3	-1.1756
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	7	154882636	159127004	2815	0.0176
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	8	31254	113380	4	0.4308
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	8	158062	593041	323	0.0528
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	8	594944	595875	8	0.5746
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	8	595892	595908	2	3.1382
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	8	601043	5598764	5737	0.0205
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	8	5598770	5604327	23	-0.5141
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	8	5604495	6158191	787	0.0373
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	8	6158260	6173075	22	-0.8098
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	8	6173354	6940226	863	-0.0129
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	8	6940602	8018038	271	0.2552
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	8	8054344	8072303	4	-1.2194
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	8	8087144	12198254	3231	0.0097
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	8	12216009	12304656	58	0.6088
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	8	12310684	12554743	76	0.3106
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	8	12556042	24972187	10351	0.0087
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	8	24974443	24984333	27	0.4061
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	8	24991104	26567924	1199	0.0039
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	8	26567939	26567987	2	-1.5345
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	8	26568110	86368269	34254	0.003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	8	86369274	86370364	2	-1.4867
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	8	86370395	146298155	38390	0.0057
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	9	46587	41733631	31226	0.0108
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	9	41842529	41985187	9	1.0253
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	9	42023107	43583463	37	0.1104
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	9	43602726	43790346	27	-0.4201
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	9	43800186	74965349	3526	0.0326
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	9	74965990	74966918	2	-1.3839
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	9	74969076	141071527	44837	0.004
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	9	141071940	141091394	6	0.8275
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	10	72759	13050005	10890	0.0105
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	10	13050023	13050170	4	-0.9961
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	10	13050428	24377675	8272	0.0026
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	10	24377676	24378054	9	-1.8346
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	10	24378908	51830360	14418	0.0076
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	10	51840984	51891920	4	-2.1352
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	10	51903768	81248584	20242	0.0076
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	10	81251331	81449007	20	0.4486
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	10	81449728	82878159	879	0.0218
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	10	82881330	82889783	10	-1.2073
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	10	82894469	135506704	36069	0.0063
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	11	198510	5793583	3307	-6e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	11	5794245	5809139	22	-0.6298
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	11	5809338	18940870	9384	3e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	11	18949072	18960115	36	-0.9675
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	11	18960750	42961831	17287	0.0021
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	11	42969584	42971168	6	0.8852
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	11	42976631	50524009	4083	0.0084
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	11	50573226	51227512	46	0.319
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	11	51227583	51228181	6	-1.0502
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	11	51238712	55376280	367	0.0805
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	11	55376498	55453009	51	-1.5603
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	11	55453576	81503468	14591	0.0076
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	11	81503992	81517105	8	-1.9863
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	11	81517158	134944770	37660	0.0053
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	12	150442	11231455	7268	0.0183
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	12	11232918	11241532	5	-1.5114
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	12	11251874	28094763	11688	0.0019
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	12	28094921	28097597	11	-0.7501
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	12	28097644	30239314	1538	-2e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	12	30239419	30243665	21	-0.4845
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	12	30243689	31906672	1247	0.0116
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	12	31907274	31909908	4	-2.0686
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	12	31917220	90483350	33836	0.0072
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	12	90491669	90492074	7	-1.5499
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	12	90493557	99796186	6442	-0.0052
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	12	99796319	99798057	16	0.5644
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	12	99798062	114631402	9587	0.0057
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	12	114632203	114637909	6	-0.8918
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	12	114638864	129228886	10053	0.007
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	12	129230513	129232545	7	-1.0551
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	12	129233988	132120715	2495	0.0313
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	12	132132584	132133335	13	-1.4438
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	12	132142331	133778189	571	0.017
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	13	19026949	19102179	8	0.5432
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	13	19123495	19249154	29	0.1868
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	13	19249604	19253330	2	0.7901
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	13	19254875	23633004	2854	0.0218
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	13	23633131	23633279	4	0.9619
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	13	23633501	38071135	10614	0.0023
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	13	38072036	38088330	17	0.4954
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	13	38088374	69242255	19383	0.0074
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	13	69248299	69268242	39	-0.6316
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	13	69269119	72476988	2050	0.0153
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	13	72477555	72480556	4	-2.2344
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	13	72480605	81009645	5970	0.005
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	13	81016813	81018469	2	-1.2542
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	13	81018529	88083061	4222	0.0124
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	13	88084516	88084758	2	-1.8538
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	13	88092539	115108397	18832	0.0077
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	14	19002124	20423372	190	0.3147
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	14	20424926	73995774	34019	0.0095
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	14	74001123	74020979	9	0.7646
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	14	74029900	106460902	20742	0.0041
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	14	106479675	106479941	2	-1.9628
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	14	106482128	106893273	186	0.085
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	14	106893456	106918069	43	-0.4349
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	14	106918094	107145272	128	0.0552
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	14	107145564	107184184	30	0.601
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	14	107184376	107285437	68	0.0704
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	15	20016328	20231906	50	0.2151
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	15	20246372	20262236	3	-1.2427
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	15	20264286	20412478	12	0.0313
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	15	20416237	22373070	269	0.4298
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	15	22375605	22383201	6	-0.5347
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	15	22385001	24460794	993	0.0542
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	15	24460826	24725293	131	0.2768
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	15	24727231	30519724	3658	0.0299
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	15	30519742	30589797	23	0.4636
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	15	30590054	102469040	46771	0.0056
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	16	60777	19944363	13501	0.014
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	16	19945650	19965832	27	-0.6613
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	16	19965875	22615804	1306	0.0353
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	16	22625584	22720189	65	0.2637
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	16	22720366	32482955	5205	0.0065
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	16	32483006	32588622	23	-0.3658
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	16	32588901	32588909	5	-3.8399
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	16	32609274	32634764	13	-0.5387
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	16	32635525	33241953	64	0.0614
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	16	33300894	33631830	89	-0.3001
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	16	33643399	55796594	6986	0.0089
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	16	55798222	55798779	3	1.8988
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	16	55804348	78371608	14392	0.0014
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	16	78372440	78384738	16	-1.8971
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	16	78384765	90287535	10614	0.0094
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	17	526	18319862	11416	0.0026
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	17	18355392	18464586	28	0.6522
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	17	18465221	18935523	174	0.0199
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	17	18950867	18965529	3	-1.2492
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	17	19003421	19497890	200	-0.026
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	17	19499736	19537470	29	-0.694
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	17	19538447	39421708	9080	0.0168
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	17	39423014	39430531	24	1.418
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	17	39432724	44195725	2529	0.0107
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	17	44197603	44752300	151	-0.397
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	17	44764994	81049726	21572	0.0046
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	18	11543	15069726	10337	0.0144
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	18	15070857	15074923	2	-1.6541
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	18	15075994	38260420	12414	-7e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	18	38260434	38265389	18	-1.6792
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	18	38268024	63906849	17599	0.0062
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	18	63906866	63911589	11	-0.7715
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	18	63911876	74028305	7605	0.0153
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	18	74028578	74028600	2	-1.3546
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	18	74029741	76660693	1913	0.0023
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	18	76662714	76664863	5	-1.1512
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	18	76666449	78015057	702	0.0225
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	19	90910	15782397	6623	6e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	19	15784116	15784152	2	-1.3897
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	19	15790085	44905905	14886	0.0159
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	19	44906524	44906547	2	-1.4674
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	19	44906619	52142352	3411	5e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	19	52142615	52148197	10	-0.6313
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	19	52154905	53519538	945	0.031
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	19	53520381	53552229	20	0.4693
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	19	53554240	59097854	3408	0.0116
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	20	61305	1567454	1205	0.027
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	20	1567653	1593893	38	-0.3153
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	20	1597946	62956153	41142	0.008
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	21	10736871	40958447	19327	0.0093
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	21	40958676	40965342	6	-0.8937
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	21	40965357	48096957	4996	0.0034
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	22	16052528	16477516	66	0.4399
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	22	16490546	18617515	1120	0.0237
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	22	18620961	18624771	3	0.5547
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	22	18626129	18629153	8	-0.9901
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	22	18630060	21809185	1676	0.0405
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	22	21815866	21841832	20	0.4675
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	22	21843935	24330218	1716	0.0525
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	22	24330269	24337949	6	0.5668
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	22	24344422	24396814	20	-1.4427
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	22	24401529	37742992	10045	0.0024
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	22	37748729	37749946	4	-0.9984
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	22	37750667	41604172	2060	-0.0035
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	22	41606030	41612450	5	-0.8375
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	22	41619226	51234455	6779	0.0034
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	X	168477	31246518	19158	-0.0047
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	X	31247066	31247582	3	-3.2114
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	X	31250584	155182354	64966	0.0041
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	Y	2650438	24314278	7509	-0.8059
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	Y	24315680	24315689	2	0.9578
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_E01_1230884	Y	24316276	59018259	1119	-0.7439
