Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	1	3218610	64590697	34064	0.0151
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	1	64596025	80467161	9498	-0.3549
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	1	80469130	94733356	8821	-0.0282
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	1	94736034	102652777	4998	-0.353
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	1	102862306	149884927	10165	-0.0179
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	1	149885583	247813706	61054	-0.3461
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	2	484222	3318612	1098	-0.0405
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	2	3322170	41231442	22827	-0.3624
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	2	41233926	55186394	8061	0.0014
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	2	55195220	55318116	74	-0.3533
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	2	55318362	195055243	70997	-0.003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	2	195055476	196221959	269	-0.3971
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	2	196222066	207286934	6261	-0.0031
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	2	207287350	207488021	115	-0.3702
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	2	207496299	216063138	5007	-0.0195
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	2	216063487	216341864	182	0.4026
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	2	216344180	216389877	23	-0.0525
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	2	216397044	222003426	3590	0.3056
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	2	222003837	229756884	4943	-0.3686
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	2	229765383	230013739	203	-0.9096
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	2	230020848	242476062	7127	-0.3583
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	3	2212571	48855541	27176	-0.0107
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	3	48859925	49080243	75	-0.2619
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	3	49081650	111795475	33194	-0.0195
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	3	111797594	112366874	348	-0.3544
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	3	112370269	112936907	365	-0.8858
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	3	112939423	117168066	2679	-0.3949
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	3	117169513	117169528	2	-1.8952
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	3	117174136	135936031	10822	-0.349
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	3	135943988	147745109	5676	-0.017
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	3	147745545	165021836	9162	0.2651
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	3	165022274	165022914	2	-1.4663
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	3	165030679	197538677	16491	0.2702
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	4	1053934	2512054	522	0.2781
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	4	2516601	20666987	11472	-0.0104
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	4	20670059	20670172	2	-1.6277
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	4	20670403	61349646	21444	-0.033
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	4	61351143	61352182	2	-1.5447
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	4	61352529	122923921	34029	-0.0243
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	4	122924339	122925529	4	-1.1272
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	4	122928256	135994713	6315	-0.0315
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	4	135994829	135995754	2	-1.7004
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	4	135996320	148556692	7218	-0.0207
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	4	148559879	178174141	16311	-0.3905
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	4	178179459	178256045	67	-0.0476
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	4	178259248	188763651	4917	-0.4032
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	5	914233	7520031	4636	0.2275
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	5	7520667	7744017	187	0.5569
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	5	7744625	138136744	69504	0.0594
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	5	138139277	138574574	206	-0.3455
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	5	138579352	156181309	10852	-0.0049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	5	156182048	178250122	13614	-0.3873
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	5	178254247	180360469	1061	0.0067
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	6	1014281	54012352	31977	0.2859
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	6	54022046	63841834	2524	-0.026
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	6	63845899	64467709	310	0.4795
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	6	64480531	120226672	31010	-0.0138
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	6	120227714	120230048	5	-1.6502
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	6	120230462	156590382	22732	-0.0157
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	6	156595497	158570975	1021	0.5243
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	6	158571655	170903919	6504	0.2419
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	7	705284	80081839	40407	0.434
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	7	80084897	82803907	1617	-0.045
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	7	82806042	158385118	38990	0.2523
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	8	617667	35508400	20646	-0.3924
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	8	35508544	35552170	28	0.2032
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	8	35552840	35599257	27	-0.0828
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	8	35599708	36226643	300	-0.422
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	8	36229143	86036792	25436	-0.0067
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	8	86037592	86038276	2	-1.3404
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	8	86038933	90050759	1929	-0.0062
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	8	90051204	90093602	39	0.3348
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	8	90093950	119753379	16823	0.0023
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	8	119753486	119755490	2	-1.3053
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	8	119757600	125278390	3590	0.0173
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	8	125281711	125283374	2	-1.4018
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	8	125283389	145232496	12382	0.007
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	9	789932	790037	2	-0.4463
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	9	790234	140938752	67783	0.1001
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	10	415240	28852460	19513	-0.3489
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	10	28857807	29637337	652	-0.8696
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	10	29637919	62574477	15528	-0.3401
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	10	62574705	62575212	2	-2.0431
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	10	62575305	134406401	44698	-0.3275
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	10	134406992	135092590	119	-0.0315
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	10	135093386	135167181	22	0.2519
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	10	135174122	135225087	26	-0.031
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	11	456120	93711698	50238	0.3702
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	11	93711832	93712651	3	-1.0566
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	11	93712900	134142530	26736	0.2367
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	12	889902	12874657	6578	0.2761
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	12	12879570	30562776	11150	-0.03
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	12	30562814	33519525	1754	0.2584
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	12	33521107	72079721	18789	-0.0183
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	12	72081554	72230469	80	-0.3336
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	12	72232186	72781779	344	-0.0143
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	12	72791070	133161346	34975	-0.3577
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	13	19450806	26842889	3822	0.4486
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	13	26843816	26898622	20	0.051
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	13	26904796	31994736	3681	0.4923
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	13	32000483	51696793	12047	-0.0321
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	13	51697307	114987458	36808	0.6368
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	14	20501368	31468195	5431	-0.0263
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	14	31468262	31568519	53	-0.2941
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	14	31570208	57532348	14434	-0.0184
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	14	57534163	105988038	29346	0.3224
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	15	23687685	40462780	8361	0.0205
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	15	40468610	41159497	335	-0.3003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	15	41166642	101884307	35691	0.0362
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	16	653459	5144018	1662	-0.6311
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	16	5152862	72501228	27779	-0.3288
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	16	72502194	72603076	37	0.0802
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	16	72603988	89379936	11178	-0.3627
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	17	987221	35575106	14227	-0.0042
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	17	35575195	35947226	183	-0.2979
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	17	35949970	56963138	10486	-0.0112
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	17	56964432	57181478	39	-0.3748
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	17	57181746	80917016	11965	-0.0094
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	18	329586	30194054	15105	0.1483
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	18	30195190	30337728	117	-0.1569
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	18	30339291	31420648	660	0.0646
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	18	31421889	31630108	101	-0.2071
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	18	31632477	33032809	791	0.0955
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	18	33045998	77109240	25700	-0.1874
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	19	284018	11912930	4079	-0.0375
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	19	11915185	12241697	112	-0.384
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	19	12242460	19250145	3174	-0.0362
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	19	19250792	19532122	118	-0.3315
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	19	19532294	58878226	16423	0.1251
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	20	455764	14691122	8948	0.3039
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	20	15165524	15743280	508	-0.0689
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	20	15743707	29873957	7334	0.252
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	20	29874664	31098642	567	0.7646
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	20	31099311	34338701	1580	1.1217
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	20	34387196	35718970	640	0.5406
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	20	35720649	35722355	8	-0.2698
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	20	35722830	47664603	7973	0.4823
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	20	47670546	62219837	9624	0.2058
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	21	15347621	47678774	20508	-0.0495
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	22	17423930	43051951	12379	-0.342
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	22	43059524	43521402	287	-0.8727
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	22	43527609	49331012	4220	-0.3641
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	X	3157107	32767884	13559	0.0025
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	X	32768480	32769118	2	-2.7294
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	X	32769140	50638685	7596	0.0102
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	X	50638783	50639531	2	2.7547
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	X	50640971	121583920	27376	-0.0028
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	X	121590578	122106405	298	-0.6105
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F07_1230886	X	122112912	154905589	14586	-0.0048
