Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	61735	72776	8	-0.1108
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	82170	98588	8	-0.9229
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	98602	356542	13	0.2255
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	404171	728608	10	-0.4942
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	740857	12839576	6476	0.0047
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	12841928	12852748	3	-0.5714
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	12857863	12858053	2	-3.143
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	12859292	17048479	2270	-0.0021
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	17056457	17114712	20	0.4499
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	17177045	17259063	55	-0.3613
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	17259320	25583341	5272	0.0042
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	25593128	25662212	31	-1.263
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	25663310	72750353	28757	0.0018
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	72756113	72763370	9	-1.0361
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	72768418	72811148	48	0.9379
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	72811904	110226743	23609	0.0044
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	110226970	110242953	23	1.096
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	110244998	111928394	1330	0.0061
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	111929137	111933231	5	-0.9628
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	111935668	149229843	7106	0.0112
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	149242663	149249447	20	0.8156
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	149254329	152555527	1522	0.0091
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	152555706	152586278	32	1.0678
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	152586540	152759678	173	-0.0057
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	152761923	152768700	37	-1.4572
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	152773905	190886507	25592	0.0016
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	190886773	190886816	2	-1.2118
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	190889685	196686139	3812	0.0095
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	196688159	196802072	117	0.3258
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	196812507	249224388	35815	0.0038
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	12784	14355708	10708	0.0041
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	14355721	14357689	12	0.516
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	14358041	35975973	14236	0.0018
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	35977790	35987947	7	-1.2592
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	35997473	40025155	2918	-9e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	40027569	40028360	5	-0.7984
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	40028857	41238220	1002	-3e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	41238235	41245887	24	-0.4692
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	41251233	52754468	8164	0.007
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	52754480	52781542	39	0.581
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	52787949	64598021	7539	0.0071
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	64598674	64601765	4	-1.1321
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	64603936	87513287	14501	0.0031
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	87514379	87520356	3	-1.4348
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	87521205	98118212	1954	0.0115
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	98140747	98162189	9	0.7062
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	98166878	117588586	11351	0.0088
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	117589767	117589853	2	-1.744
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	117591245	125430787	5119	0.0075
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	125436130	125438128	6	-1.0573
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	125439569	164636852	23563	0.0038
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	164643488	164645126	5	-0.8157
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	164646642	174745206	6402	-0.0064
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	174745563	174746892	2	-1.4868
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	174748572	180061655	3251	-0.0057
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	180067192	180076663	2	-2.0269
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	180079144	208354955	16618	0.0073
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	208355178	208359336	16	-2.6516
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	208359476	213181315	3029	0.0045
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	213181322	213191825	26	-0.7282
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	213192126	215722785	1606	-0.0026
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	215722992	215731667	7	0.7818
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	215732353	243089456	17399	-1e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	3	60345	3153069	2730	0.0465
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	3	3153143	3153520	3	-1.1326
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	3	3154083	68746164	44964	0.0077
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	3	68746259	68748786	16	0.7652
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	3	68748945	129761124	34629	0.0075
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	3	129762859	129798735	47	0.5135
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	3	129798781	192877902	39412	0.0105
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	3	192877962	192882903	19	-0.7783
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	3	192886435	195383142	1486	0.0024
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	3	195390680	195430899	16	-0.4974
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	3	195433770	197896118	1199	-0.0029
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	4	12281	69521409	42288	0.005
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	4	69528959	69558271	6	-1.0533
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	4	69582483	70123510	318	0.0384
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	4	70127644	70232124	56	-0.4639
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	4	70236151	114887611	27075	0.0048
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	4	114888127	114904910	13	-0.5066
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	4	114904952	115173700	171	-0.0131
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	4	115175323	115182175	23	-1.3581
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	4	115184229	161871852	27915	0.0044
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	4	161871868	161885033	39	0.2879
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	4	161885123	172987928	7050	0.0033
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	4	172989148	172989533	12	-1.2908
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	4	172995979	189221258	10891	0.0149
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	4	189221360	189221375	2	-1.3704
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	4	189221424	191027923	1177	0.0486
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	5	15532	12785262	10179	0.0058
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	5	12790869	12820076	13	0.6019
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	5	12824411	12997810	56	0.1824
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	5	12997970	13014507	6	0.6312
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	5	13015045	32107084	12032	0.0135
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	5	32109589	32158455	38	0.4971
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	5	32170287	46191884	8354	0.0036
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	5	46195883	46199435	4	-1.2774
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	5	46209299	140218722	54991	0.0061
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	5	140223836	140243756	13	-0.5338
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	5	140252163	180790320	26985	0.0022
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	149661	294837	123	-0.006
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	302306	385056	84	0.3277
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	385687	26737032	20022	6e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	26737438	26762387	16	0.5571
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	26762572	29837072	1443	0.0113
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	29837187	29850196	17	0.7706
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	29850274	32587457	1237	-0.0136
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	32593021	32602107	7	-1.2855
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	32602269	32624304	9	0.1617
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	32624591	32626618	5	1.0512
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	32650612	32688615	37	-0.0334
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	32688632	32688853	2	-2.5482
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	32689324	32800412	98	-0.0089
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	32802351	32803840	3	-1.0992
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	32803999	65336942	17919	0.0095
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	65347544	65348992	2	-1.8197
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	65350776	67009023	1100	0.0254
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	67009054	67043923	46	0.3026
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	67044143	73215068	4132	0.0105
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	73215085	73215099	2	-1.5254
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	73215322	77014948	2326	0.0073
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	77016900	77027607	32	-0.5952
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	77027781	77500542	335	0.0318
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	77501140	77501580	5	-0.6932
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	77504465	78971834	927	0.0157
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	78972088	79032592	102	0.3769
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	79034940	157779495	50117	0.0043
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	157781264	157796076	3	1.2397
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	157796994	171051005	9405	0.0061
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	7	43355	6833877	3432	0.0091
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	7	6837006	6838724	3	-1.7504
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	7	6854110	38387443	24033	0.006
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	7	38391365	38398047	5	-1.5323
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	7	38400957	64568852	14118	0.0043
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	7	64594065	64595698	6	-1.5069
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	7	64637128	70420438	3145	-2e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	7	70423250	70426141	2	1.8052
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	7	70428243	91208142	11962	0.0114
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	7	91218884	91219132	3	-1.4928
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	7	91225032	91357869	96	0.0024
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	7	91358294	91358771	4	0.8075
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	7	91358789	97385970	3727	0.0051
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	7	97395460	97402475	16	-0.8568
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	7	97404240	141763124	26566	0.0045
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	7	141769643	141799117	45	-0.387
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	7	141799160	142474939	446	-0.0027
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	7	142476719	142486115	28	0.5977
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	7	142486345	159127004	10547	0.01
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	8	31254	11949551	11254	0.0236
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	8	11987726	12001123	6	-0.9508
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	8	12034307	24970550	10490	0.0077
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	8	24971005	24984333	32	0.375
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	8	24991104	39246675	8993	0.0023
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	8	39247111	39332971	32	-0.3776
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	8	39333133	130112168	53776	0.0045
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	8	130116696	130128118	13	-0.8781
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	8	130136626	134368205	3220	0.0042
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	8	134369208	134369306	2	1.3508
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	8	134369966	143128774	6674	0.006
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	8	143128775	143130738	3	-1.3283
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	8	143136640	146253895	1106	0.0194
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	8	146253941	146298155	25	-0.8032
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	9	46587	6661613	6329	0.0107
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	9	6663786	6670448	5	-1.1612
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	9	6672097	8425122	1756	0.0237
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	9	8425271	8425422	3	-1.042
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	9	8427170	10403105	1842	0.0247
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	9	10404138	10404986	2	1.5766
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	9	10407943	90522594	36024	0.009
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	9	90554151	90554219	2	-1.5779
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	9	90557957	138219743	32605	0.0035
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	9	138219857	138226768	11	0.5661
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	9	138226865	141091394	1092	0.0129
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	10	72759	17927554	14817	0.0076
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	10	17938208	17949857	2	2.456
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	10	17971816	18173963	13	0.0336
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	10	18185123	18199813	3	-1.9914
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	10	18223647	81383874	39003	0.0057
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	10	81383884	81423240	6	-1.1262
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	10	81423379	135506704	36954	0.0039
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	11	198510	18940322	12713	0.0079
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	11	18940856	18961988	59	0.6823
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	11	18962016	47393638	19973	0.0044
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	11	47394305	47394317	2	-1.2051
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	11	47396222	55363340	1786	0.0174
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	11	55374032	55376498	9	-0.6877
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	11	55376511	55442318	39	-1.7759
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	11	55444211	55447237	6	-0.7054
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	11	55447332	55453009	5	-0.7971
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	11	55453576	101594384	28563	0.006
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	11	101597860	101597964	4	1.0845
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	11	101598212	107238656	3794	0.0085
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	11	107238671	107239128	6	-1.7863
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	11	107252362	134944770	19892	4e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	12	150442	865736	415	0.0081
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	12	865970	873504	17	-0.7058
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	12	873944	2235889	832	0.0137
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	12	2245862	2257920	41	-0.5046
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	12	2258023	9630556	4888	-9e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	12	9633870	9713674	22	-1.4051
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	12	9714954	10257466	416	-0.0132
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	12	10261929	10264341	2	-1.1912
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	12	10265217	12536297	1624	0.0111
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	12	12536415	12542880	16	-0.7258
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	12	12542914	30233058	12223	0.0062
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	12	30233330	30243933	32	0.3461
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	12	30243950	70871858	23048	0.0039
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	12	70872675	70877750	5	-2.776
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	12	70877765	70878027	4	-1.0711
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	12	70879385	99791814	18467	0.0028
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	12	99795293	99798734	31	-0.4759
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	12	99803093	133778189	22718	0.009
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	13	19026949	115108397	64031	0.0069
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	14	19002124	21349517	904	-0.0085
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	14	21349608	21408956	23	-0.848
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	14	21409981	22116895	388	0.0096
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	14	22117398	22117475	2	-1.7907
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	14	22121921	40608928	11749	0.0066
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	14	40613922	40616919	2	-2.5111
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	14	40618165	48227037	4591	0.0267
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	14	48231967	48277276	29	-0.8027
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	14	48277451	73990621	16517	0.0041
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	14	73990662	74029900	13	0.7298
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	14	74029915	99649091	17579	0.0064
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	14	99649563	99649597	2	1.2821
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	14	99649754	106538062	3185	0.007
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	14	106541753	106561441	12	0.7622
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	14	106567100	107285437	418	0.0461
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	15	20016328	20206939	48	0.0204
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	15	20216955	20411378	14	-0.9613
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	15	20411648	22285769	247	-0.2609
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	15	22287270	102469040	51599	0.006
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	16	60777	14896197	11091	0.0096
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	16	14897801	14989839	15	-0.5948
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	16	15048768	19944363	2391	0.0142
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	16	19945650	19967362	29	-0.7026
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	16	19970254	30646695	5949	0.005
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	16	30647273	30668512	4	-1.2528
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	16	30668790	34466571	1028	0.0329
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	16	34470704	34755566	167	0.4753
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	16	34757071	70139542	15363	0.0066
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	16	70151527	70197767	13	-0.6544
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	16	70198330	74384258	2423	0.0048
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	16	74397058	74407379	7	-0.6941
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	16	74452036	81178596	6421	0.0093
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	16	81181018	81181641	4	-1.1173
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	16	81185073	90287535	7401	0.0041
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	17	526	39423090	20936	0.0068
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	17	39423103	39430531	19	-0.555
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	17	39432724	43992490	2362	0.0073
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	17	43994557	43994648	2	-1.2436
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	17	43996678	44162284	140	0.016
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	17	44162307	44364170	128	-0.3881
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	17	44394412	44737622	43	0.3467
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	17	44741425	54159044	5808	0.0097
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	17	54160914	54172823	28	-0.7892
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	17	54173247	78601416	14756	0.004
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	17	78604201	78611668	11	0.7103
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	17	78611724	81049726	976	-0.0017
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	18	11543	38260480	22762	0.0055
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	18	38260490	38265389	14	0.8154
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	18	38268024	39931539	1129	0.0146
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	18	39937192	39937789	10	-0.6046
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	18	39940403	74441415	24362	0.0148
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	18	74443550	74443626	2	-1.4539
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	18	74445024	78015057	2335	0.0067
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	19	90910	20826976	9114	-0.0033
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	19	20829591	20986315	95	0.5774
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	19	20996860	35849322	7592	0.0116
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	19	35849493	35861848	22	-0.5542
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	19	35866744	43686151	3908	0.0049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	19	43687847	43691318	3	-1.5091
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	19	43694161	44905905	776	0.004
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	19	44906524	44906547	2	-1.8138
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	19	44906619	50447527	2460	-0.0024
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	19	50448648	50448756	2	-1.4926
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	19	50449955	56273057	3484	1e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	19	56278050	56286293	7	0.7613
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	19	56288941	56716579	329	0.0171
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	19	56716919	56719368	4	-1.0739
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	19	56720274	59097854	1511	0.0022
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	20	61305	1560951	1201	0.0118
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	20	1560999	1599002	46	-0.3198
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	20	1599061	26305579	18749	0.0086
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	20	29420352	29505830	22	-1.1719
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	20	29527893	52644868	14887	0.0044
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	20	52647808	52658651	38	-0.6901
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	20	52662574	60768185	6593	0.0068
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	20	60772583	60777155	4	-0.9425
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	20	60778191	62956153	849	0.0094
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	21	10736871	10940642	33	0.3504
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	21	10942932	44968053	22529	0.0064
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	21	44970873	44972812	2	-2.085
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	21	44973667	48096957	1762	0.0155
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	22	16052528	16077141	6	-0.5524
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	22	16102342	16206211	17	0.3395
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	22	16222695	16281595	18	0.7923
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	22	16350807	23262981	3874	0.0193
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	22	23263242	23263257	2	-1.7365
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	22	23263274	25661698	1540	-0.0141
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	22	25663985	25664801	3	-1.4962
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	22	25664832	39363619	10028	0.0036
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	22	39363684	39375307	23	-0.5497
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	22	39389628	51234455	8011	0.0033
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	X	168477	80191321	41660	-0.0052
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	X	80191983	80191990	2	-2.4409
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	X	80197863	116868011	19910	0.0017
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	X	116870072	116884805	10	-3.4242
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	X	116884943	116922446	23	-0.6497
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	X	116922475	137572670	11660	-0.0054
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	X	137572728	137572845	2	2.2347
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	X	137573005	141002531	2057	-0.0026
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	X	141002773	141003473	2	-2.3451
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	X	141004516	143626060	1843	0.0057
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	X	143631490	143637684	4	-1.3819
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	X	143638124	152707617	5943	-0.0033
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	X	152707868	152713153	2	-2.0452
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	X	152713672	155182354	952	-0.015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	Y	2650438	59018259	8629	-0.8296
