Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	1	3208470	245880329	128557	-1e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	474222	64451525	37042	-0.0033
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	64452178	64455269	4	-1.1321
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	64457440	174453452	55447	-0.0018
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	174453809	174455138	2	-1.4868
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	2	174456818	242124735	38284	-0.0017
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	3	526235	147079770	79649	0.0025
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	3	147081068	147082129	2	-1.4633
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	3	147082775	199023074	26345	0.0038
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	4	1043934	115107060	62952	9e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	4	115107576	115124359	13	-0.5045
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	4	115124401	189836143	39324	-0.0014
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	5	967233	180293075	100059	9e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	959281	73271789	39739	0.0016
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	73271806	73271820	2	-1.5254
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	6	73272043	170745844	56328	2e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	7	671810	158077879	81009	2e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	8	607667	129548738	71819	0.0015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	8	129549219	129549236	2	-1.375
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	8	129550895	130181350	362	0.0043
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	8	130185878	130197300	13	-0.8781
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	8	130205808	134437387	3033	-2e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	8	134438390	134438488	2	1.3508
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	8	134439148	145304484	5971	2e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	9	779932	140058573	67766	0
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	10	405240	117819182	69424	3e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	10	117822818	117822987	2	-1.3818
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	10	117823031	135075077	11136	0.0016
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	11	446120	133647740	76972	-0.001
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	12	760163	131671419	73673	-9e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	13	18348806	102300021	49130	1e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	13	102300333	102300844	3	-1.1644
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	13	102301323	114005560	7247	0.0021
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	14	19571208	105059083	49262	0.0024
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	15	21238778	59004665	20555	-7e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	15	59005277	59005339	2	-1.3928
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	15	59008484	84944427	14700	0.0034
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	15	84946745	84947152	9	-0.5899
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	15	84947372	99701830	9115	5e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	16	593460	87907437	40739	0.0049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	17	933971	78510305	36899	0.0021
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	18	319586	38185537	20944	-1e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	18	38191190	38191787	10	-0.6046
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	18	38194401	75210228	21522	0.003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	19	235018	63570038	23907	7e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	20	403764	60201580	36707	0.0024
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	20	60205978	60210550	4	-0.9425
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	20	60211586	61690281	469	0.0127
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	21	14269492	46503202	20510	-8e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	22	15803930	47717016	16888	0.0035
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	X	3167107	116752039	46223	-0.0022
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	X	116754100	116768833	10	-3.4242
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	X	116768971	116775440	6	-0.9693
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	X	116782035	116803734	13	-0.0685
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	X	116804504	116806474	4	-2.0591
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	X	116806503	152360811	16738	-0.0033
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	X	152361062	152366347	2	-2.0452
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_F09_1230984	X	152366866	154558783	383	-0.0174
