Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	1	61735	1663336	238	0.0752
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	1	1663396	1663831	2	1.5426
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	1	1669101	16149915	8162	0.0075
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	1	16153497	16153925	6	0.8202
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	1	16154201	17076467	386	0.0143
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	1	17082412	17112177	15	0.7742
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	1	17114427	21751244	3084	-0.0013
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	1	21759795	21760125	2	-1.6454
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	1	21769887	25583341	2242	0.01
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	1	25593128	25646184	24	-1.4003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	1	25646689	72768916	28774	0.0043
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	1	72768936	72811148	45	-0.6482
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	1	72811904	106013376	20938	0.0036
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	1	106019205	106022360	16	0.6634
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	1	106022375	110226743	2651	0.0032
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	1	110226970	110242953	23	-0.4316
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	1	110244998	112690326	1953	0.0081
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	1	112695965	112697213	22	0.5346
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	1	112697241	248749560	73406	0.0049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	1	248753216	248795289	27	-0.7978
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	1	248795852	249224388	148	0.0731
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	2	12784	17674793	13149	0.0031
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	2	17675735	17675959	2	-2.171
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	2	17678048	34691069	10883	0.0023
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	2	34699315	34737163	47	-1.6991
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	2	34737556	52754468	12993	0.0051
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	2	52754480	52754881	6	-1.4011
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	2	52758753	86937687	21894	0.0046
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	2	86953070	86953854	2	-1.7972
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	2	86970406	106883229	7719	0.0071
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	2	106883331	106885013	6	-2.0675
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	2	106885357	129637927	13417	0.0031
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	2	129638078	129640315	16	-0.5668
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	2	129640329	180047803	30677	0.0011
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	2	180047908	180083591	12	-0.6282
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	2	180083629	222085906	25391	0.0025
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	2	222086331	222089516	9	-0.9933
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	2	222089797	243089456	13302	0.0061
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	3	60345	46783247	33119	0.0122
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	3	46783250	46859479	46	-0.6604
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	3	46859832	65881273	12685	0.0035
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	3	65882161	65965425	66	0.5466
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	3	65967673	68746164	1788	0.0023
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	3	68746259	68747413	14	-0.8659
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	3	68748758	129766586	34631	0.0048
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	3	129775858	129806236	50	-1.1262
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	3	129806924	162532950	20230	0.0074
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	3	162534730	162540473	5	-1.616
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	3	162540490	162714517	121	-0.0647
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	3	162717727	162719562	2	-2.4942
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	3	162726159	167526485	2629	0.015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	3	167528129	167547761	14	0.5857
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	3	167551463	192878593	16402	0.0029
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	3	192878821	192879006	2	1.8314
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	3	192880473	195285898	1498	0.0152
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	3	195383142	195455508	29	0.4876
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	3	195455861	196261177	361	0.0083
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	3	196262194	196264713	2	-1.8997
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	3	196264893	197896118	824	0.0283
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	4	12281	69372003	42214	0.0048
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	4	69374941	69485979	64	-1.2886
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	4	69489335	71118991	956	0.0412
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	4	71119902	71120977	3	-1.8264
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	4	71120978	161052774	54006	0.0042
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	4	161053591	161070789	39	-0.6648
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	4	161083870	161880812	602	-0.005
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	4	161880906	161884908	11	-0.8071
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	4	161884919	188924979	17767	0.0098
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	4	188928442	188936160	10	-1.0807
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	4	188936629	191027923	1362	0.0474
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	5	15532	7169476	5727	0.0093
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	5	7177338	7189925	26	-0.9587
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	5	7202635	46251306	24943	0.0061
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	5	46271008	46273502	8	-1.9011
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	5	46278212	97045121	27919	5e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	5	97048466	97099320	43	-0.9121
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	5	97099684	134822283	24033	0.0106
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	5	134825485	134825683	2	-1.7604
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	5	134828213	155475104	13177	0.0058
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	5	155475105	155495253	17	-0.6111
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	5	155495257	180374523	16587	0.0044
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	5	180378710	180433225	20	0.5414
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	5	180433264	180790320	169	8e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	6	149661	29849267	21702	0.0082
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	6	29850196	29918436	33	-0.3653
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	6	29918453	32501299	1175	0.0304
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	6	32508476	32587457	30	-0.4416
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	6	32593021	32605576	10	-1.4098
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	6	32605884	32690027	54	0.0098
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	6	32690797	32690812	2	2.0302
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	6	32690830	78962889	26909	0.0048
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	6	78969065	79026701	100	-0.4392
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	6	79026972	103734829	15434	0.0079
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	6	103737976	103762061	46	0.5309
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	6	103765470	126182763	13837	0.0016
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	6	126183692	126186776	3	-1.7879
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	6	126188893	134266268	5173	0.0047
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	6	134269071	134269632	2	-1.5416
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	6	134272072	153834283	13037	0.0019
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	6	153835125	153840970	5	-1.3307
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	6	153845322	171051005	12009	0.0126
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	7	43355	38387443	27459	0.0095
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	7	38391365	38398047	5	-1.4312
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	7	38400957	54380373	10981	0.0076
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	7	54386505	54386517	6	1.6895
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	7	54393488	142474939	49145	0.0071
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	7	142476719	142486045	27	0.5668
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	7	142486115	143873952	837	0.0074
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	7	143896252	144066947	44	0.4085
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	7	144074929	153147638	5563	0.0116
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	7	153147645	153147712	2	-2.0494
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	7	153147715	159127004	4102	0.0219
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	8	31254	593041	327	0.0436
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	8	594944	595908	10	1.6425
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	8	606117	2247094	1305	0.0291
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	8	2247158	2259358	16	-0.5834
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	8	2270328	2322801	102	0.0622
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	8	2330767	2339651	2	1.6539
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	8	2343530	2701934	352	0.0404
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	8	2703533	2703899	7	-1.099
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	8	2707171	7186646	5678	0.0279
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	8	7193821	7226303	22	0.5314
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	8	7226436	12216009	3450	0.0155
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	8	12216848	12260973	41	-0.4853
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	8	12263749	12839659	345	0.0232
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	8	12839728	12839792	2	-1.8096
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	8	12839852	39230659	19109	0.0041
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	8	39235603	39386965	58	-1.886
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	8	39388299	85257989	25826	0.0018
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	8	85262883	85268666	19	-0.6411
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	8	85270682	112294466	16077	0.0065
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	8	112294646	112295260	7	-1.4594
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	8	112300281	146298155	22870	0.0084
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	9	46587	43800186	31294	0.0117
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	9	44114872	44469328	48	-0.5036
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	9	44629223	141091394	48315	0.0057
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	10	72759	13049885	10884	0.011
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	10	13050005	13050170	5	-1.3168
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	10	13050428	24377674	8269	0.0054
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	10	24377675	24377682	6	-1.676
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	10	24377918	47414281	12465	0.0064
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	10	47419711	47742076	189	0.5146
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	10	47743501	67306276	12760	0.0077
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	10	67307923	67322795	29	0.4397
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	10	67322926	135506704	46191	0.0051
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	11	198510	5783395	3294	0.0238
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	11	5783682	5809338	36	-0.4439
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	11	5809461	18940870	9384	-1e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	11	18949072	18961178	40	-0.8923
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	11	18961281	38461257	14248	0.0046
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	11	38462691	38463187	5	-0.9299
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	11	38467336	51337258	7191	0.0146
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	11	51352990	51357245	3	-1.3665
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	11	51375310	56677352	1212	0.0346
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	11	56678446	56683852	6	-0.8812
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	11	56685218	85887957	16622	0.0058
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	11	85889658	85898821	17	-0.689
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	11	85899812	134944770	34784	0.0078
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	12	150442	869316	421	0.0411
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	12	869349	875354	14	-0.9345
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	12	876246	2232157	825	0.0207
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	12	2233929	2253004	30	0.3759
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	12	2253047	8346805	4255	0.0071
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	12	8357507	8378251	12	0.625
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	12	8393828	9619705	634	0.0373
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	12	9620109	9728292	31	-1.1971
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	12	9734969	11220827	1038	-0.0072
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	12	11222368	11241532	10	-1.1028
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	12	11251874	33294660	15525	0.0049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	12	33301406	33307374	27	-2.5512
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	12	33308360	129228886	58905	0.004
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	12	129230513	129232545	7	-1.0226
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	12	129233988	133778189	3079	0.0339
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	13	19026949	38076287	13512	0.0099
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	13	38076300	38084321	7	-0.8113
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	13	38084543	57751096	12490	0.0056
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	13	57758270	57776569	32	-0.735
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	13	57778368	64224205	3789	0.0101
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	13	64224792	64236692	9	-0.871
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	13	64239563	72476988	5154	0.0149
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	13	72477555	72480556	4	1.1216
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	13	72480605	98527274	16885	0.0049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	13	98530124	98531465	6	-1.1297
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	13	98533830	110672102	9477	0.0056
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	13	110672968	110675198	5	-1.3708
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	13	110678775	115108397	2652	0.0165
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	14	19002124	19417203	28	-0.0293
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	14	19422533	19469520	10	0.8368
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	14	19541714	41629242	13748	5e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	14	41633385	41653977	6	-1.0055
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	14	41657249	107285437	41615	0.0045
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	15	20016328	21173886	267	0.1326
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	15	21186400	21192108	3	-1.1324
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	15	21192211	56789647	21245	0.0121
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	15	56790703	56800977	25	-0.5339
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	15	56801623	76891511	12712	-7e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	15	76891627	76895198	12	-2.0987
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	15	76895344	102469040	17645	0.0101
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	16	60777	21412403	14426	0.0144
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	16	21515074	21606052	31	-0.4502
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	16	21606184	22558311	358	0.0233
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	16	22558997	22710742	71	-0.8439
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	16	22712979	33241953	5315	0.0176
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	16	33300894	33643399	90	0.357
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	16	33644022	34549716	258	0.0076
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	16	34557728	34558309	2	-1.4761
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	16	34558514	55796594	6723	8e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	16	55798222	55798779	3	2.2616
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	16	55804348	69988386	8723	0.0058
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	16	70024589	70187092	45	0.4695
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	16	70187194	78371608	5626	0.0063
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	16	78372440	78381263	14	-2.1671
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	16	78383140	90287535	10620	0.0166
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	17	526	18319862	11417	0.0147
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	17	18355392	18411923	17	0.519
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	17	18412558	39421708	9498	0.0077
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	17	39423014	39430531	24	1.709
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	17	39432724	44364170	2632	0.0242
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	17	44394412	44408662	5	-0.2983
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	17	44408674	44752300	43	-0.6298
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	17	44764994	81049726	21571	0.0044
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	18	11543	28794375	16635	0.0105
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	18	28795096	28795283	2	1.8229
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	18	28795414	46255750	11540	0.0029
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	18	46256051	46256295	2	-1.7533
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	18	46258436	78015057	22433	0.0139
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	19	90910	12024607	4721	0.0057
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	19	12030258	12061384	24	-0.8221
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	19	12068846	21153058	4549	0.002
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	19	21153079	21153474	2	-1.8475
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	19	21154168	24375449	1903	0.0097
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	19	24379102	24385071	5	-1.0935
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	19	24385369	24456957	20	-0.1642
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	19	24460818	24464957	10	-0.9229
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	19	24487682	35849322	5567	0.0085
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	19	35849493	35861170	18	-0.5486
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	19	35861649	43697333	3918	8e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	19	43703033	43766659	23	-0.5597
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	19	43767012	59097854	8545	0.0079
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	20	61305	1560951	1201	0.0301
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	20	1560999	1593893	42	1.1458
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	20	1597946	54138368	34930	0.0063
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	20	54138428	54138442	2	-1.5411
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	20	54138706	62956153	6213	0.0102
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	21	10736871	25551825	7948	0.0177
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	21	25553013	25553226	6	-0.8835
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	21	25554353	48096957	16375	0.0049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	22	16052528	24271661	4580	0.0391
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	22	24271679	24337949	35	-0.4549
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	22	24344422	24396814	20	0.7268
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	22	24401529	51234455	18895	0.0083
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	X	168477	8747395	4671	0.0028
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	X	8747411	8748271	2	-3.8669
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	X	8753270	30699777	14128	0.0048
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	X	30700085	30712296	2	-2.4063
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	X	30716499	50728694	11438	0.0013
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	X	50730519	50730716	2	-5.4477
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	X	50730730	154565731	53687	0.0015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	X	154582472	155182354	160	0.8238
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G03_1231028	Y	2650438	59018259	8629	-0.8824
