Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	1	3218610	22635467	10535	0.002
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	1	22636232	22639623	5	-0.8458
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	1	22640138	31621427	4298	0.0025
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	1	31623667	31625389	3	-1.2177
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	1	31627099	220761607	96716	0.0015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	1	220762524	220762910	2	-1.6026
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	1	220765879	247813706	16891	2e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	2	484222	69170841	39998	-0.0011
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	2	69172911	69173003	2	-2.3968
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	2	69173518	242476062	90600	0.0012
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	3	2212571	197538677	105862	8e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	4	1053934	188763651	102199	0.0021
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	5	914233	180360469	99953	0.0032
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	6	1014281	15987077	10561	8e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	6	15994826	15994861	2	-1.9348
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	6	15994986	22553992	4545	0.0042
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	6	22556583	22563888	9	-1.3781
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	6	22565090	170903919	80854	0.0017
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	7	705284	130887551	66336	0.0011
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	7	130887581	130887687	2	-1.6645
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	7	130890470	143122424	6911	6e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	7	143127190	143127771	3	-1.2551
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	7	143131367	158385118	7680	-0.0015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	8	617667	35399419	20555	-0.0092
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	8	35399529	35399982	2	-2.8777
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	8	35400096	141464105	59938	-0.0077
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	8	141465982	141558803	37	0.558
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	8	141559125	145232496	589	-0.0112
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	9	789932	26562396	16118	-3e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	9	26596938	26597540	2	-1.9547
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	9	26598392	140938752	51588	0.002
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	10	415240	135225087	80447	-4e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	11	456120	134142530	76881	0.0038
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	12	889902	133161346	73587	1e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	13	19450806	114987458	56311	0.0026
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	14	20501368	105988038	49190	3e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	15	23687685	101884307	44323	0.0011
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	16	653459	89379936	40630	0.0039
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	17	987221	80917016	36851	0.0027
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	18	329586	73817537	40439	0.0045
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	18	73818069	73834371	15	-0.5833
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	18	73834402	77109240	1961	0.003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	19	284018	28532051	9160	0.0039
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	19	28533064	28538989	2	-1.3958
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	19	28539281	58878226	14718	0.0012
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	20	455764	38034463	20968	0.0062
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	20	38038991	38042046	3	-1.1782
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	20	38046128	62219837	16156	0.0024
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	21	15347621	42868131	18106	0.0038
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	21	42868195	42868213	2	-1.4865
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	21	42868337	47678774	2380	0.0116
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	22	17423930	34058436	7393	-0.0054
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	22	34058812	34059441	3	-1.1245
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	22	34059487	37177686	2198	-0.0028
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	22	37177841	37179760	2	-1.2545
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	22	37182681	49331012	7275	-0.0038
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	X	3157107	49756993	20650	0.0019
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	X	49758893	49759745	2	-3.9254
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	X	49763361	108339349	21407	0.0057
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	X	108339383	108362615	4	-2.5805
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G09_1231056	X	108363541	154905589	21220	0.005
