Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	61735	1663336	238	-0.0312
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	1663396	1663831	2	2.6699
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	1669101	25583341	13892	-0.0035
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	25593128	25646946	27	-1.2925
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	25646986	30738432	2396	-7e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	30738504	30739796	5	-0.9485
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	30741496	46510353	8902	0.0017
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	46512275	46513826	2	1.6297
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	46519553	72763370	17450	-0.0033
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	72768418	72811904	49	1.0345
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	72812440	81888456	5762	0.0016
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	81888602	81888605	2	1.9142
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	81888667	104159347	14233	0.003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	104159384	104259444	24	-0.8509
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	104260032	110220590	3570	-2e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	110220739	110246281	41	-0.4311
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	110250235	112696087	1950	4e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	112696193	112705956	24	0.5464
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	112706060	147242596	6138	-0.0046
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	147244246	147244441	2	1.9086
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	147246903	148789461	188	-0.0665
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	148789848	148789864	2	2.1091
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	148789983	148947710	14	-0.1554
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	148949202	149248712	131	-0.6009
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	149248727	149248841	2	1.5142
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	149249447	152555176	1521	-0.031
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	152555527	152586238	32	1.1295
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	152586278	152756774	171	-0.0067
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	152756806	152768700	40	0.4879
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	152773905	174797333	14826	-8e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	174797385	174797448	2	1.7453
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	174797505	193156317	12205	0.0049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	193156332	193156348	2	1.6678
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	193159723	196711187	2387	0.0067
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	196714822	196801850	92	0.407
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	196801987	223020504	17701	0.0046
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	223022923	223023604	2	-2.2922
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	223023769	249224388	18114	0.003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	2	12784	4205687	2985	-0.0232
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	2	4213864	4223167	36	-0.6121
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	2	4223512	243089456	146502	5e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	3	60345	519163	442	0.0058
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	3	521639	527223	3	1.5885
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	3	527901	45543225	31820	0.0027
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	3	45545624	45547745	2	-3.02
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	3	45549463	60844642	9257	4e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	3	60849404	60850181	2	1.606
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	3	60850476	68746259	6174	0
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	3	68746284	68747413	13	0.7721
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	3	68748758	75392373	4851	0.001
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	3	75393730	75396818	3	-1.4184
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	3	75397213	86602871	6168	0.0052
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	3	86603960	86604373	2	-2.0153
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	3	86607698	175883749	52076	0.0021
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	3	175888059	175914479	34	-0.7542
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	3	175916221	192874747	10942	0.0027
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	3	192877902	192882903	20	0.6421
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	3	192886435	197896118	2700	-0.0066
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	4	12281	3599450	1508	-0.0178
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	4	3599869	3602184	2	-2.0934
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	4	3609390	4103344	190	-0.0221
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	4	4110230	4166997	14	-0.5566
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	4	4167133	10210390	4073	-0.0166
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	4	10223416	10231249	27	-1.4199
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	4	10231498	49267848	25933	5e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	4	49291192	49291355	2	-1.8213
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	4	49297220	70389716	11025	0.0023
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	4	70389861	70390779	2	-1.8151
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	4	70391888	104745571	20855	-2e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	4	104751630	104753601	8	1.3
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	4	104753737	172987928	41316	0.0067
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	4	172989148	173000821	16	0.6777
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	4	173001831	183730650	7206	0.0024
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	4	183731737	183731744	2	2.1968
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	4	183735262	191027923	4855	-0.0033
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	5	15532	742689	327	-0.0435
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	5	761016	833628	38	-0.6009
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	5	852566	12819313	9815	-0.0141
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	5	12819375	12820076	6	-1.2342
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	5	12824411	21451200	5531	0.0066
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	5	21451277	21452438	4	-1.6495
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	5	21452496	46251306	14966	0.0043
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	5	46271008	46273502	8	-1.4499
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	5	46278212	180790320	81955	0.0017
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	6	149661	26737438	20225	9e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	6	26737457	26758030	14	-0.6872
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	6	26762387	77014948	28383	-0.0011
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	6	77016900	77017056	6	1.2
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	6	77017069	78969065	1287	0.0103
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	6	78969105	79032317	107	0.3389
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	6	79032592	93102308	8913	-4e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	6	93102577	93206791	59	-0.6624
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	6	93208068	95190723	1367	0.014
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	6	95193106	95196646	3	1.912
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	6	95197387	103738333	5093	0.003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	6	103738406	103751338	11	0.7815
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	6	103751564	171051005	44078	0.0042
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	7	43355	3610364	1621	-0.0089
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	7	3610409	3618361	27	-0.8618
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	7	3624804	26606005	17463	0.003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	7	26606222	26609627	2	-2.1655
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	7	26609966	57534527	21237	-0.002
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	7	57536111	57536638	3	-1.5339
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	7	57536709	64594065	1228	-0.0091
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	7	64594341	64595118	4	-1.648
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	7	64595698	70420438	3147	-0.0066
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	7	70423250	70426141	2	-1.8879
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	7	70428243	91357869	12061	9e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	7	91358294	91359033	7	0.9511
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	7	91359336	126068847	20416	0.0041
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	7	126069942	126070211	2	1.7637
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	7	126075983	126286730	136	-0.0098
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	7	126287005	126287058	2	-2.2325
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	7	126291876	141770532	9756	-0.0012
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	7	141770627	141791908	31	-1.8158
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	7	141792107	159127004	11019	-0.0046
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	8	31254	24974522	21756	-0.0039
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	8	24974577	24984223	22	-1.9797
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	8	24984250	39246675	8989	-0.005
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	8	39247111	39386965	56	0.669
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	8	39388299	64847719	13613	-0.0012
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	8	64848031	64849008	11	0.8491
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	8	64849071	107248230	25242	0.0012
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	8	107248746	107249433	2	1.8849
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	8	107249559	136040921	19557	0.0025
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	8	136041144	136051490	22	-0.716
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	8	136056107	146298155	6348	-0.0106
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	9	46587	1447011	1461	-0.0091
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	9	1448017	1453039	11	-0.9014
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	9	1453358	29088729	23220	0.0074
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	9	29089610	29097680	6	1.3943
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	9	29100799	39330197	6455	0.0033
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	9	39337293	40476154	11	0.9225
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	9	40508680	68183981	372	0.0352
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	9	68186051	68188547	8	1.2212
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	9	68209916	79120919	6146	0.0023
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	9	79122346	79123279	11	-0.8269
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	9	79125310	141091394	41951	-0.0013
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	10	72759	24377675	19161	0.0016
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	10	24377676	24378054	9	-1.6934
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	10	24378908	57587929	18663	0.0024
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	10	57588292	57590768	2	1.9253
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	10	57593097	58730657	797	0.0115
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	10	58732355	58751986	17	0.5091
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	10	58754535	68125672	6596	-0.0021
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	10	68125781	68125841	2	-1.9049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	10	68126695	135506704	45546	-0.003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	11	198510	11140081	7075	-0.001
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	11	11142382	11146438	2	-2.1923
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	11	11150830	18950586	5639	-0.0015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	11	18951037	18960115	24	-0.5498
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	11	18960750	48929921	20664	6e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	11	48930132	48930328	2	2.215
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	11	48964733	51096372	731	0.009
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	11	51126742	51127104	2	-2.0371
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	11	51163249	55374032	385	-0.0107
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	11	55374048	55442318	47	0.5824
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	11	55444211	55452977	10	0.3917
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	11	55453009	91830489	21325	0.0024
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	11	91830658	91831043	2	2.5421
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	11	91832704	134944770	30932	6e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	12	150442	9633870	6196	-0.0099
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	12	9637909	9728292	24	-1.0674
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	12	9734969	11503942	1180	0.0138
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	12	11503975	11543386	33	0.635
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	12	11543406	45899825	20983	0.0072
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	12	45904438	45909537	4	-1.9726
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	12	45913292	133778189	56384	-0.0014
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	13	19026949	72476988	34990	0.0034
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	13	72477555	72480556	4	-2.0262
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	13	72480605	115108397	29019	0.0025
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	14	19002124	19557041	40	0.0469
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	14	19562139	19693231	9	0.9479
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	14	19693249	20200183	33	0.399
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	14	20200381	20423372	108	0.8484
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	14	20424926	74001123	34011	0.0053
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	14	74006707	74020979	8	-1.4947
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	14	74029900	106689549	20825	0.0012
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	14	106692797	106692904	2	2.1632
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	14	106693455	106751284	27	-0.1495
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	14	106753859	106753867	3	1.9126
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	14	106754003	106796025	16	0.0484
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	14	106796228	106825916	11	-0.6428
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	14	106826112	107285437	303	0.0358
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	15	20016328	20440538	68	0.0596
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	15	20446138	22363231	265	-0.3034
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	15	22373070	22673399	88	-0.6746
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	15	22681076	23124889	273	0.0259
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	15	23136164	23288349	34	-0.4961
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	15	23290800	24669745	693	-0.0109
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	15	24674751	24714839	35	-1.0803
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	15	24714858	30743145	3725	-0.0083
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	15	30747394	30948636	27	0.5601
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	15	30950529	55971215	15822	0.0034
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	15	55971745	55973398	3	-1.586
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	15	55973972	86079834	18429	-0.0011
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	15	86080122	86085314	3	1.4186
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	15	86085776	102375434	12420	-0.0035
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	15	102388354	102388492	2	2.043
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	15	102388641	102469040	23	0.1923
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	16	60777	22602868	14823	-0.013
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	16	22603164	22652189	28	-0.4985
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	16	22655308	22655964	3	1.0537
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	16	22657035	22720366	37	-0.3299
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	16	22721638	27075915	3137	0.0042
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	16	27075930	27076909	2	-2.1875
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	16	27077127	90287535	34264	-0.0093
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	17	526	665044	336	-0.0706
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	17	667243	667377	2	2.2645
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	17	678491	17460674	10607	-0.0087
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	17	17463799	17464014	2	-1.9983
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	17	17466214	20395887	1326	-0.0162
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	17	20410231	20413446	2	-1.874
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	17	20431180	78628863	31953	-0.0061
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	17	78629793	78634179	2	2.0928
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	17	78634300	81049726	961	-0.0011
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	18	11543	78015057	50615	0.005
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	19	90910	59097854	29299	-0.0113
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	20	61305	23496724	18264	-0.0017
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	20	23496874	23498207	2	2.0223
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	20	23498531	53628230	17524	-0.0045
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	20	53628374	53631463	2	1.8097
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	20	53631579	62956153	6584	-0.0073
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	21	10736871	44968053	22564	0.0019
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	21	44970873	44972812	2	-2.0909
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	21	44973667	48096957	1762	-0.0179
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	22	16052528	16407899	58	0.3744
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	22	16410179	18617515	1128	-0.003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	22	18620961	18629153	11	-0.9264
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	22	18630060	18896301	59	0.1487
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	22	18904838	18905606	6	-1.1387
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	22	18908641	24330218	3347	-0.0817
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	22	24330269	24331967	2	-2.7529
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	22	24332625	24337949	4	-0.5568
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	22	24344422	24396814	20	0.4653
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	22	24401529	39290920	10808	-0.0113
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	22	39295255	39296904	3	-2.1153
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	22	39299114	51234455	8072	-0.0224
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	X	168477	97436109	51163	-7e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	X	97439564	97440199	3	1.6063
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	X	97441444	155182354	33041	-3e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	Y	2650438	2985595	152	-2.3863
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	Y	2985939	6101425	715	-1.9763
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	Y	6107901	15590276	2705	-2.4375
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	Y	15590342	15594523	3	-7.7053
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	Y	15594889	19034392	1824	-2.4574
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	Y	19038302	21088297	960	-2.866
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	Y	21088485	24516081	1245	-2.4519
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	Y	24516702	27240184	489	-2.952
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	Y	27254679	27717920	95	-2.2903
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	Y	27718192	28423938	254	-3.0117
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	Y	28438116	59018259	183	-2.2375
