Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	1	3218610	247813706	128585	0.0022
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	2	484222	242476062	130765	3e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	3	2212571	14498648	7386	0.0054
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	3	14498753	14499020	2	1.5373
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	3	14500744	86602871	41568	0.0025
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	3	86603960	86604373	2	-2.0153
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	3	86607698	197538677	57025	0.0021
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	4	1053934	188763651	102295	9e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	5	914233	180360469	100043	0.0016
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	6	1014281	93102308	50979	0.0024
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	6	93102577	93206791	59	-0.6618
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	6	93208068	170903919	45037	0.0059
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	7	705284	158385118	80996	0.0022
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	8	617667	136040921	76624	0.0017
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	8	136041144	136051490	22	-0.716
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	8	136056107	145232496	4556	0.0085
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	9	789932	140938752	67761	-3e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	10	415240	135225087	80559	0.0012
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	11	456120	11140081	5882	7e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	11	11142382	11146438	2	-2.1923
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	11	11150830	28752080	12121	-5e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	11	28752290	28753841	2	1.7731
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	11	28753961	134142530	58945	2e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	12	889902	133161346	73671	0.0011
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	13	19450806	114987458	56360	0.0015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	14	20501368	105988038	49241	0.0027
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	15	23687685	55971215	17187	0.0031
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	15	55971745	55973398	3	-1.586
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	15	55973972	101884307	27189	5e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	16	653459	89379936	40666	-6e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	17	987221	80917016	36884	6e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	18	329586	77109240	42475	0.0018
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	19	284018	58878226	23898	-0.005
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	20	455764	33426212	18485	-0.0037
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	20	33432523	33434562	2	-1.4455
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	20	33435161	62219837	18684	7e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	21	15347621	47678774	20510	4e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	22	17423930	49331012	16883	-0.0024
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_G11_1231058	X	3157107	154905589	63506	0.0018
