gene_id gene_name seqname start end strand gene_type gene_status havana_gene full_length exon_length exon_num ENSG00000223972.5 DDX11L1 chr1 11869 14409 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000000961.2 2541 1735 9 ENSG00000238009.5 RP11-34P13.7 chr1 89295 133723 - lincRNA NOVEL OTTHUMG00000001096.2 44429 3726 17 ENSG00000230415.1 RP5-902P8.10 chr1 1275223 1280420 + lincRNA NOVEL OTTHUMG00000002234.2 5198 513 5 ENSG00000236335.1 RP4-591L5.1 chr1 30409560 30411638 - lincRNA NOVEL OTTHUMG00000003682.1 2079 507 3 ENSG00000213842.2 SUGT1P2 chr3 32752910 32753901 + processed_pseudogene KNOWN OTTHUMG00000155904.1 992 992 1 ENSG00000227337.1 AC139452.2 chr3 32785646 32786116 + processed_pseudogene KNOWN OTTHUMG00000155776.1 471 471 1 ENSG00000206557.5 TRIM71 chr3 32818018 32897826 + protein_coding KNOWN OTTHUMG00000155778.3 79809 8685 4 ENSG00000183813.6 CCR4 chr3 32951574 32956349 + protein_coding KNOWN OTTHUMG00000130752.2 4776 3095 2 ENSG00000170266.14 GLB1 chr3 32996608 33097230 - protein_coding KNOWN OTTHUMG00000155781.6 100623 4364 123 ENSG00000223899.1 SEC13P1 chr3 33033863 33034810 + processed_pseudogene KNOWN OTTHUMG00000155780.1 948 948 1 ENSG00000235424.1 SUMO2P10 chr3 33077204 33077491 + processed_pseudogene KNOWN OTTHUMG00000155777.1 288 288 1 ENSG00000188167.7 TMPPE chr3 33090421 33096801 - protein_coding KNOWN OTTHUMG00000155779.1 6381 3966 4 ENSG00000275090.1 Metazoa_SRP chr3 33103008 33103306 + misc_RNA NOVEL NA 299 299 1 ENSG00000170275.13 CRTAP chr3 33113979 33147773 + protein_coding KNOWN OTTHUMG00000130746.3 33795 6695 18 ENSG00000231949.1 RP4-591L5.2 chr1 30415825 30421108 + lincRNA NOVEL OTTHUMG00000037511.1 5284 481 3 ENSG00000272149.1 RP11-627J17.1 chr3 33144104 33147721 - antisense NOVEL OTTHUMG00000185462.1 3618 305 2 ENSG00000173705.7 SUSD5 chr3 33150042 33219215 - protein_coding KNOWN OTTHUMG00000155829.2 69174 5008 9 ENSG00000230119.1 AC123900.2 chr3 33190233 33190328 - processed_pseudogene KNOWN OTTHUMG00000155833.1 96 96 1 ENSG00000153558.12 FBXL2 chr3 33277025 33403662 + protein_coding KNOWN OTTHUMG00000130745.7 126638 7664 210 ENSG00000153560.10 UBP1 chr3 33388336 33441371 - protein_coding KNOWN OTTHUMG00000130749.4 53036 9760 100 ENSG00000252700.1 RNU7-110P chr3 33414150 33414211 + snRNA KNOWN NA 62 62 1 ENSG00000202175.1 RNA5SP128 chr3 33491983 33492098 - rRNA KNOWN NA 116 116 1 ENSG00000163539.14 CLASP2 chr3 33496245 33718356 - protein_coding KNOWN OTTHUMG00000156489.11 222112 15157 294 ENSG00000238008.1 COX6CP10 chr3 33554636 33554859 + processed_pseudogene KNOWN OTTHUMG00000155866.1 224 224 1 ENSG00000228112.1 AC112220.2 chr3 33727250 33727604 - processed_pseudogene KNOWN OTTHUMG00000155867.1 355 355 1 ENSG00000162510.5 MATN1 chr1 30711277 30723587 - protein_coding KNOWN OTTHUMG00000003705.2 12311 4606 14 ENSG00000227707.1 SDAD1P3 chr3 33771963 33772295 + processed_pseudogene KNOWN OTTHUMG00000155868.1 333 333 1 ENSG00000271324.1 RP11-10C24.2 chr3 33793644 33794145 - lincRNA NOVEL OTTHUMG00000184931.1 502 502 1 ENSG00000271643.1 RP11-10C24.3 chr3 33795688 33796950 - lincRNA NOVEL OTTHUMG00000185053.1 1263 1263 1 ENSG00000271020.1 RP11-10C24.1 chr3 33797149 33797681 - lincRNA NOVEL OTTHUMG00000184932.1 533 533 1 ENSG00000170248.12 PDCD6IP chr3 33798352 33869707 + protein_coding KNOWN OTTHUMG00000130751.6 71356 9038 97 ENSG00000226320.4 AC018359.1 chr3 34159334 34562877 + lincRNA NOVEL OTTHUMG00000155767.2 403544 1135 14 ENSG00000236452.1 AC123023.1 chr3 34203244 34268811 + lincRNA NOVEL OTTHUMG00000155764.1 65568 555 2 ENSG00000227498.2 AC018359.3 chr3 34524818 34543880 - lincRNA NOVEL OTTHUMG00000155766.2 19063 574 3 ENSG00000235534.1 FECHP1 chr3 34872641 34873854 + processed_pseudogene KNOWN OTTHUMG00000155765.1 1214 1214 1 ENSG00000228767.1 KRT8P18 chr3 35215705 35217149 - processed_pseudogene KNOWN OTTHUMG00000155763.1 1445 1445 1 ENSG00000186056.8 MATN1-AS1 chr1 30718504 30726827 + antisense NOVEL OTTHUMG00000003706.2 8324 4024 12 ENSG00000212442.1 RNU6-243P chr3 35256840 35256946 - snRNA KNOWN NA 107 107 1 ENSG00000172995.15 ARPP21 chr3 35638945 35794496 + protein_coding KNOWN OTTHUMG00000130795.14 155552 10092 215 ENSG00000230830.1 ARPP21-AS1 chr3 35650197 35651961 - antisense NOVEL OTTHUMG00000156606.1 1765 542 2 ENSG00000207625.1 MIR128-2 chr3 35744476 35744559 + miRNA KNOWN NA 84 84 1 ENSG00000226489.1 AC104308.2 chr3 35871866 35872198 + processed_pseudogene KNOWN OTTHUMG00000155792.1 333 333 1 ENSG00000236158.1 RFC3P1 chr3 36169767 36170448 - processed_pseudogene KNOWN OTTHUMG00000155793.1 682 682 1 ENSG00000144681.9 STAC chr3 36380344 36548007 + protein_coding KNOWN OTTHUMG00000130798.13 167664 4396 51 ENSG00000231382.1 NBPF21P chr3 36616006 36637457 - unprocessed_pseudogene KNOWN OTTHUMG00000155806.2 21452 1451 9 ENSG00000201315.1 RN7SKP227 chr3 36685040 36685369 + misc_RNA KNOWN NA 330 330 1 ENSG00000163673.6 DCLK3 chr3 36712422 36739861 - protein_coding KNOWN OTTHUMG00000155805.2 27440 5406 8 ENSG00000162511.7 LAPTM5 chr1 30732469 30757820 - protein_coding KNOWN OTTHUMG00000003707.1 25352 3274 18 ENSG00000230067.3 HSPD1P6 chr3 36767117 36784167 - transcribed_processed_pseudogene KNOWN OTTHUMG00000155803.1 17051 2179 3 ENSG00000279727.1 RP11-640L9.1 chr3 36819276 36822498 - lincRNA NOVEL OTTHUMG00000189233.1 3223 1344 4 ENSG00000281100.1 RP11-640L9.2 chr3 36823151 36825158 - TEC KNOWN OTTHUMG00000189723.1 2008 2008 1 ENSG00000168016.12 TRANK1 chr3 36826820 36945057 - protein_coding KNOWN OTTHUMG00000155848.4 118238 11177 30 ENSG00000234073.1 AC011816.1 chr3 36880184 36880729 - processed_pseudogene KNOWN OTTHUMG00000155851.1 546 546 1 ENSG00000210181.1 RNU6ATAC4P chr3 36968191 36968316 - snRNA KNOWN NA 126 126 1 ENSG00000272334.1 RP11-129K12.1 chr3 36973117 36973672 - lincRNA NOVEL OTTHUMG00000185481.1 556 556 1 ENSG00000236165.1 PRADC1P1 chr3 36976316 36976840 + processed_pseudogene KNOWN OTTHUMG00000155852.1 525 525 1 ENSG00000178567.7 EPM2AIP1 chr3 36985043 36993168 - protein_coding KNOWN OTTHUMG00000185486.2 8126 8126 6 ENSG00000076242.13 MLH1 chr3 36993332 37050918 + protein_coding KNOWN OTTHUMG00000130797.8 57587 3532 228 ENSG00000264773.1 MIR4420 chr1 30739156 30739232 - miRNA KNOWN NA 77 77 1 ENSG00000224858.5 RPL29P11 chr3 37016523 37017014 - processed_pseudogene KNOWN OTTHUMG00000155865.1 492 492 1 ENSG00000093167.16 LRRFIP2 chr3 37052656 37183689 - protein_coding KNOWN OTTHUMG00000130796.32 131034 10644 163 ENSG00000206645.1 Y_RNA chr3 37093133 37093234 - misc_RNA NOVEL NA 102 102 1 ENSG00000225558.1 UBE2D3P2 chr3 37134658 37135102 + processed_pseudogene KNOWN OTTHUMG00000155909.1 445 445 1 ENSG00000199594.1 RNU6-1301P chr3 37140327 37140430 + snRNA KNOWN NA 104 104 1 ENSG00000224080.1 UBE2FP1 chr3 37143512 37143958 - processed_pseudogene KNOWN OTTHUMG00000155910.1 447 447 1 ENSG00000271993.1 RP11-285J16.1 chr3 37182107 37182734 + antisense NOVEL OTTHUMG00000185491.1 628 628 1 ENSG00000231449.1 AC097359.2 chr3 37196204 37196666 + processed_pseudogene KNOWN OTTHUMG00000155908.2 463 463 1 ENSG00000271653.1 RP11-259K5.1 chr3 37216779 37217988 + lincRNA NOVEL OTTHUMG00000185096.1 1210 1210 1 ENSG00000270194.1 RP11-259K5.2 chr3 37241789 37244177 - antisense NOVEL OTTHUMG00000185097.1 2389 2389 1 ENSG00000280823.1 Metazoa_SRP chr1 30771747 30771987 - misc_RNA NOVEL NA 241 241 1 ENSG00000144674.15 GOLGA4 chr3 37243177 37366751 + protein_coding KNOWN OTTHUMG00000130799.6 123575 10737 130 ENSG00000230409.3 TCEA1P2 chr3 37275693 37276598 + processed_pseudogene KNOWN OTTHUMG00000186574.1 906 906 1 ENSG00000222208.1 RNA5SP129 chr3 37341649 37341766 + rRNA KNOWN NA 118 118 1 ENSG00000198590.10 C3orf35 chr3 37386269 37435497 + lincRNA KNOWN OTTHUMG00000155923.3 49229 3072 37 ENSG00000144668.10 ITGA9 chr3 37452115 37823514 + protein_coding KNOWN OTTHUMG00000130815.4 371400 8277 49 ENSG00000239105.1 RNU7-73P chr3 37573151 37573213 - snRNA KNOWN NA 63 63 1 ENSG00000235257.7 ITGA9-AS1 chr3 37745432 37861780 - processed_transcript NOVEL OTTHUMG00000155924.5 116349 6651 77 ENSG00000235482.1 RPL21P135 chr3 37748110 37748900 + processed_pseudogene KNOWN OTTHUMG00000155925.1 791 791 1 ENSG00000236411.1 NDUFAF4P3 chr3 37789921 37790445 - processed_pseudogene KNOWN OTTHUMG00000155922.1 525 525 1 ENSG00000144677.13 CTDSPL chr3 37861960 37984469 + protein_coding KNOWN OTTHUMG00000155942.3 122510 5796 45 ENSG00000229607.1 RP5-1125N11.1 chr1 30810378 30815553 - lincRNA NOVEL OTTHUMG00000003704.1 5176 444 2 ENSG00000199075.1 MIR26A1 chr3 37969404 37969480 + miRNA KNOWN NA 77 77 1 ENSG00000136059.13 VILL chr3 37988059 38007188 + protein_coding KNOWN OTTHUMG00000130814.7 19130 6476 93 ENSG00000187091.12 PLCD1 chr3 38007496 38029762 - protein_coding KNOWN OTTHUMG00000130813.6 22267 4314 62 ENSG00000200579.1 Y_RNA chr3 38014568 38014669 + misc_RNA NOVEL NA 102 102 1 ENSG00000008226.18 DLEC1 chr3 38039205 38124025 + protein_coding KNOWN OTTHUMG00000131085.18 84821 8338 107 ENSG00000231668.2 PPP2R2DP1 chr3 38051759 38052395 + processed_pseudogene KNOWN OTTHUMG00000155979.1 637 637 1 ENSG00000060971.16 ACAA1 chr3 38103129 38137242 - protein_coding KNOWN OTTHUMG00000131087.5 34114 7106 146 ENSG00000201965.1 Y_RNA chr3 38125292 38125394 - misc_RNA NOVEL NA 103 103 1 ENSG00000172936.11 MYD88 chr3 38138478 38143022 + protein_coding KNOWN OTTHUMG00000131083.4 4545 3989 43 ENSG00000172939.7 OXSR1 chr3 38165089 38255488 + protein_coding KNOWN OTTHUMG00000131084.3 90400 6075 56 ENSG00000223382.3 RP1-65J11.1 chr1 30824228 30834284 + lincRNA NOVEL OTTHUMG00000003749.5 10057 1326 7 ENSG00000172940.10 SLC22A13 chr3 38265812 38278315 + protein_coding KNOWN OTTHUMG00000131086.4 12504 2555 17 ENSG00000237982.1 RP11-815I22.1 chr3 38270283 38270767 - processed_pseudogene KNOWN OTTHUMG00000156004.1 485 485 1 ENSG00000144671.9 SLC22A14 chr3 38282294 38318575 + protein_coding KNOWN OTTHUMG00000131082.3 36282 3659 27 ENSG00000199514.1 RNU6-235P chr3 38303773 38303879 - snRNA KNOWN NA 107 107 1 ENSG00000230123.1 DLEC1P1 chr3 38325237 38329070 - unprocessed_pseudogene KNOWN OTTHUMG00000156032.1 3834 576 4 ENSG00000093217.8 XYLB chr3 38346760 38421348 + protein_coding KNOWN OTTHUMG00000131294.3 74589 5343 48 ENSG00000229589.1 ACVR2B-AS1 chr3 38451027 38454820 - antisense NOVEL OTTHUMG00000156031.1 3794 2517 2 ENSG00000114739.12 ACVR2B chr3 38453851 38493142 + protein_coding KNOWN OTTHUMG00000131291.3 39292 15744 31 ENSG00000157036.11 EXOG chr3 38496127 38542161 + protein_coding KNOWN OTTHUMG00000131295.6 46035 5223 106 ENSG00000207512.1 Y_RNA chr3 38505480 38505581 - misc_RNA NOVEL NA 102 102 1 ENSG00000222784.1 RN7SKP91 chr1 30843823 30844110 + misc_RNA KNOWN NA 288 288 1 ENSG00000230683.1 DDTP1 chr3 38515448 38515830 - processed_pseudogene KNOWN OTTHUMG00000156076.1 383 383 1 ENSG00000232439.1 RPL18AP7 chr3 38526802 38527325 - processed_pseudogene KNOWN OTTHUMG00000156165.1 524 524 1 ENSG00000183873.14 SCN5A chr3 38548057 38649673 - protein_coding KNOWN OTTHUMG00000156166.3 101617 10017 259 ENSG00000185313.6 SCN10A chr3 38696802 38794010 - protein_coding KNOWN OTTHUMG00000048245.3 97209 6418 27 ENSG00000222719.1 AC116038.1 chr3 38800296 38800394 - miRNA NOVEL NA 99 99 1 ENSG00000231243.1 RP11-134J21.1 chr3 38823902 38825302 + antisense NOVEL OTTHUMG00000156164.1 1401 408 3 ENSG00000168356.10 SCN11A chr3 38845769 38950561 - protein_coding KNOWN OTTHUMG00000048246.4 104793 7703 76 ENSG00000206708.1 RNU6-1227P chr3 39025987 39026093 + snRNA KNOWN NA 107 107 1 ENSG00000114742.12 WDR48 chr3 39051998 39096671 + protein_coding KNOWN OTTHUMG00000155972.5 44674 7488 91 ENSG00000114745.12 GORASP1 chr3 39096659 39108363 - protein_coding KNOWN OTTHUMG00000131292.4 11705 6256 123 ENSG00000162572.18 SCNN1D chr1 1280436 1292029 + protein_coding KNOWN OTTHUMG00000002081.6 11594 4025 113 ENSG00000235143.1 RP1-65J11.5 chr1 30858158 30860254 + antisense NOVEL OTTHUMG00000043647.1 2097 1747 2 ENSG00000168026.15 TTC21A chr3 39107704 39138903 + protein_coding KNOWN OTTHUMG00000155973.2 31200 7677 152 ENSG00000276236.1 MIR6822 chr3 39138206 39138266 + miRNA KNOWN NA 61 61 1 ENSG00000144655.13 CSRNP1 chr3 39141855 39154562 - protein_coding KNOWN OTTHUMG00000131293.2 12708 3214 10 ENSG00000214305.4 Metazoa_SRP chr3 39161270 39161520 + misc_RNA NOVEL NA 251 251 1 ENSG00000168334.8 XIRP1 chr3 39183210 39192596 - protein_coding KNOWN OTTHUMG00000131297.3 9387 6467 7 ENSG00000215034.4 DSTNP4 chr3 39214199 39214672 + processed_pseudogene KNOWN OTTHUMG00000156247.1 474 474 1 ENSG00000168329.12 CX3CR1 chr3 39263494 39281735 - protein_coding KNOWN OTTHUMG00000156249.1 18242 3655 12 ENSG00000270367.1 RP11-331G2.6 chr3 39285985 39287920 + processed_pseudogene KNOWN OTTHUMG00000184341.1 1936 1936 1 ENSG00000179934.6 CCR8 chr3 39329706 39333511 + protein_coding KNOWN OTTHUMG00000131290.2 3806 1318 5 ENSG00000228168.1 HNRNPA1P21 chr3 39334979 39335939 + processed_pseudogene KNOWN OTTHUMG00000156248.1 961 961 1 ENSG00000162512.14 SDC3 chr1 30869467 30908761 - protein_coding KNOWN OTTHUMG00000043646.1 39295 7067 15 ENSG00000238267.1 RP11-241K18.2 chr3 39338129 39338879 - processed_pseudogene KNOWN OTTHUMG00000156246.1 751 476 2 ENSG00000223668.1 EEF1A1P24 chr3 39358545 39359922 + processed_pseudogene KNOWN OTTHUMG00000156250.1 1378 1378 1 ENSG00000144659.9 SLC25A38 chr3 39383348 39397351 + protein_coding KNOWN OTTHUMG00000131289.8 14004 2151 12 ENSG00000168028.12 RPSA chr3 39406689 39412542 + protein_coding KNOWN OTTHUMG00000131296.3 5854 3936 40 ENSG00000206760.1 SNORA6 chr3 39408389 39408539 + snoRNA KNOWN NA 151 151 1 ENSG00000202363.1 SNORA62 chr3 39411054 39411206 + snoRNA KNOWN NA 153 153 1 ENSG00000264724.1 AC099332.1 chr3 39417480 39417565 + miRNA NOVEL NA 86 86 1 ENSG00000168314.16 MOBP chr3 39467198 39529479 + protein_coding KNOWN OTTHUMG00000131347.9 62282 9237 60 ENSG00000230757.1 NFU1P1 chr3 39643638 39644705 + processed_pseudogene KNOWN OTTHUMG00000156282.1 1068 774 2 ENSG00000170011.12 MYRIP chr3 39808914 40260321 + protein_coding KNOWN OTTHUMG00000131392.2 451408 5872 139 ENSG00000266210.2 RN7SL371P chr1 30918469 30918735 - misc_RNA KNOWN NA 267 267 1 ENSG00000201570.1 RNU4-56P chr3 39970125 39970266 + snRNA KNOWN NA 142 142 1 ENSG00000280739.1 EIF1B-AS1 chr3 40173145 40309698 - processed_transcript KNOWN OTTHUMG00000189530.1 136554 5433 18 ENSG00000265327.2 RN7SL411P chr3 40209005 40209304 + misc_RNA KNOWN NA 300 300 1 ENSG00000202517.1 SNORA64 chr3 40238608 40238741 + snoRNA NOVEL NA 134 134 1 ENSG00000114784.3 EIF1B chr3 40309684 40312424 + protein_coding KNOWN OTTHUMG00000131388.2 2741 1912 11 ENSG00000223797.4 ENTPD3-AS1 chr3 40313802 40453329 - antisense NOVEL OTTHUMG00000156074.2 139528 2961 15 ENSG00000230274.1 PGAM1P3 chr3 40322715 40323279 - processed_pseudogene KNOWN OTTHUMG00000156073.1 565 565 1 ENSG00000168032.7 ENTPD3 chr3 40387156 40428619 + protein_coding KNOWN OTTHUMG00000131390.3 41464 3365 37 ENSG00000188846.12 RPL14 chr3 40457292 40468587 + protein_coding KNOWN OTTHUMG00000156046.6 11296 8626 39 ENSG00000177873.11 ZNF619 chr3 40477113 40490236 + protein_coding KNOWN OTTHUMG00000131391.6 13124 4514 49 ENSG00000134644.14 PUM1 chr1 30931506 31065991 - protein_coding KNOWN OTTHUMG00000003795.4 134486 6621 253 ENSG00000199906.1 RNU5B-2P chr3 40498891 40499003 - snRNA KNOWN NA 113 113 1 ENSG00000177842.10 ZNF620 chr3 40505992 40518736 + protein_coding KNOWN OTTHUMG00000156044.2 12745 3457 18 ENSG00000172888.10 ZNF621 chr3 40524878 40574685 + protein_coding KNOWN OTTHUMG00000131389.3 49808 8354 38 ENSG00000234067.1 RPL5P10 chr3 40586535 40587428 - processed_pseudogene KNOWN OTTHUMG00000156008.1 894 894 1 ENSG00000226845.1 EEF1GP3 chr3 40596207 40597494 - processed_pseudogene KNOWN OTTHUMG00000156007.1 1288 1288 1 ENSG00000226302.1 RP11-528N21.1 chr3 40603125 40605427 - lincRNA NOVEL OTTHUMG00000156009.1 2303 717 2 ENSG00000229072.1 HMGN2P24 chr3 40699066 40699338 - processed_pseudogene KNOWN OTTHUMG00000156010.1 273 273 1 ENSG00000234287.1 RP11-761N21.2 chr3 40761545 40761799 + processed_pseudogene KNOWN OTTHUMG00000156012.1 255 255 1 ENSG00000231873.1 RP11-761N21.1 chr3 40766207 40862626 + lincRNA NOVEL OTTHUMG00000156011.1 96420 500 3 ENSG00000233096.1 RP11-520A21.1 chr3 40970541 40971578 - lincRNA NOVEL OTTHUMG00000156006.1 1038 670 2 ENSG00000237329.2 RP11-201O14.1 chr1 31036734 31037240 + processed_pseudogene KNOWN OTTHUMG00000003787.3 507 507 1 ENSG00000233919.1 RP11-372H2.1 chr3 41162287 41168547 - lincRNA NOVEL OTTHUMG00000156144.1 6261 610 4 ENSG00000275256.1 MRPS31P1 chr3 41189041 41189236 + processed_pseudogene KNOWN OTTHUMG00000187551.1 196 196 1 ENSG00000168036.15 CTNNB1 chr3 41194837 41260096 + protein_coding KNOWN OTTHUMG00000131393.5 65260 6614 114 ENSG00000168038.9 ULK4 chr3 41246599 41962430 - protein_coding KNOWN OTTHUMG00000156210.3 715832 6579 98 ENSG00000221337.1 AC099537.1 chr3 41649256 41649337 + miRNA NOVEL NA 82 82 1 ENSG00000252409.1 SCARNA21 chr3 41687868 41688033 - scaRNA NOVEL NA 166 166 1 ENSG00000222942.1 RN7SKP58 chr3 41766615 41766919 - misc_RNA KNOWN NA 305 305 1 ENSG00000223513.1 ATP6V0E1P2 chr3 41859350 41859594 - processed_pseudogene KNOWN OTTHUMG00000156188.1 245 245 1 ENSG00000251986.1 Y_RNA chr3 41868998 41869095 - misc_RNA NOVEL NA 98 98 1 ENSG00000212145.2 U8 chr3 41899111 41899253 - snoRNA NOVEL NA 143 143 1 ENSG00000232768.1 RP11-201O14.2 chr1 31050872 31051034 + processed_pseudogene KNOWN OTTHUMG00000003789.1 163 163 1 ENSG00000234270.1 RPL36P20 chr3 41955445 41955763 + processed_pseudogene KNOWN OTTHUMG00000156199.1 319 319 1 ENSG00000235339.1 GEMIN2P2 chr3 41977008 41978034 + processed_pseudogene KNOWN OTTHUMG00000156200.2 1027 715 2 ENSG00000182606.13 TRAK1 chr3 42013802 42225889 + protein_coding KNOWN OTTHUMG00000131795.8 212088 10992 111 ENSG00000229339.1 RP11-193I22.2 chr3 42051181 42051694 - processed_pseudogene KNOWN OTTHUMG00000156198.1 514 514 1 ENSG00000234562.1 TPMTP2 chr3 42145646 42146371 - processed_pseudogene KNOWN OTTHUMG00000156196.1 726 726 1 ENSG00000222872.1 RNU4-78P chr3 42221840 42221965 + snRNA KNOWN NA 126 126 1 ENSG00000187094.10 CCK chr3 42257825 42266207 - protein_coding KNOWN OTTHUMG00000131796.2 8383 2085 13 ENSG00000281160.1 RP11-333B11.1 chr3 42264989 42266390 + antisense NOVEL OTTHUMG00000189593.1 1402 1402 1 ENSG00000231280.1 SALL4P6 chr3 42321005 42322695 + processed_pseudogene KNOWN OTTHUMG00000156186.1 1691 1691 1 ENSG00000229572.1 EIF4BP4 chr3 42340588 42342367 + processed_pseudogene KNOWN OTTHUMG00000156187.1 1780 1780 1 ENSG00000215900.4 SEPW1P chr1 31094987 31095558 - processed_pseudogene KNOWN OTTHUMG00000008500.2 572 252 2 ENSG00000157093.7 LYZL4 chr3 42397078 42410600 - protein_coding KNOWN OTTHUMG00000131793.2 13523 1013 15 ENSG00000239181.1 AC092048.1 chr3 42422146 42422238 - miRNA NOVEL NA 93 93 1 ENSG00000235787.1 RP11-219I21.1 chr3 42469640 42469879 + processed_pseudogene KNOWN OTTHUMG00000156170.2 240 240 1 ENSG00000114812.11 VIPR1 chr3 42489299 42537573 + protein_coding KNOWN OTTHUMG00000131792.7 48275 7384 119 ENSG00000232354.6 VIPR1-AS1 chr3 42506465 42533258 - antisense NOVEL OTTHUMG00000156181.5 26794 5197 189 ENSG00000093183.12 SEC22C chr3 42547969 42601080 - protein_coding KNOWN OTTHUMG00000131797.2 53112 8159 86 ENSG00000008324.9 SS18L2 chr3 42581840 42595114 + protein_coding KNOWN OTTHUMG00000131794.2 13275 1301 9 ENSG00000114857.16 NKTR chr3 42600614 42648741 + protein_coding KNOWN OTTHUMG00000133037.21 48128 17356 128 ENSG00000230084.4 RP4-613B23.1 chr3 42601963 42654388 - antisense NOVEL OTTHUMG00000156209.1 52426 785 9 ENSG00000114853.12 ZBTB47 chr3 42653684 42665854 + protein_coding KNOWN OTTHUMG00000156207.4 12171 3781 13 ENSG00000225142.2 RP11-490K7.1 chr1 31108188 31108623 - processed_pseudogene KNOWN OTTHUMG00000003786.2 436 436 1 ENSG00000240203.3 RN7SL567P chr3 42676189 42676491 - misc_RNA KNOWN NA 303 303 1 ENSG00000157119.11 KLHL40 chr3 42685519 42692544 + protein_coding KNOWN OTTHUMG00000133045.4 7026 2517 6 ENSG00000244607.4 CCDC13 chr3 42692663 42773253 - protein_coding KNOWN OTTHUMG00000133046.3 80591 4966 48 ENSG00000010282.13 HHATL chr3 42692663 42702827 - protein_coding KNOWN OTTHUMG00000133043.3 10165 2891 71 ENSG00000230970.3 HHATL-AS1 chr3 42702653 42706776 + antisense NOVEL OTTHUMG00000156258.3 4124 1331 7 ENSG00000173811.9 CCDC13-AS1 chr3 42732575 42746768 + antisense NOVEL OTTHUMG00000156256.1 14194 2164 7 ENSG00000280571.1 RP4-613B23.5 chr3 42757177 42804518 - protein_coding KNOWN OTTHUMG00000156277.4 47342 602 5 ENSG00000225611.1 RP11-70C1.1 chr3 42770612 42773635 + antisense NOVEL OTTHUMG00000156257.1 3024 897 2 ENSG00000181061.12 HIGD1A chr3 42784298 42804531 - protein_coding KNOWN OTTHUMG00000190394.1 20234 1675 19 ENSG00000235288.2 RP11-70C1.3 chr3 42785087 42852428 - antisense NOVEL OTTHUMG00000156432.2 67342 1956 8 ENSG00000084628.8 NKAIN1 chr1 31179745 31239554 - protein_coding KNOWN OTTHUMG00000003788.3 59810 2987 21 ENSG00000144648.13 ACKR2 chr3 42804752 42887974 + protein_coding KNOWN OTTHUMG00000186377.3 83223 5469 40 ENSG00000273328.4 RP11-141M3.6 chr3 42809414 42908105 + processed_transcript NOVEL OTTHUMG00000189111.1 98692 3933 13 ENSG00000273291.4 RP11-136C24.3 chr3 42809446 43055871 + protein_coding NOVEL OTTHUMG00000156448.9 246426 1654 22 ENSG00000240747.6 KRBOX1 chr3 42809483 42942792 + protein_coding KNOWN OTTHUMG00000186062.1 133310 2943 19 ENSG00000180432.5 CYP8B1 chr3 42856005 42876165 - protein_coding KNOWN OTTHUMG00000133047.2 20161 4441 3 ENSG00000236459.1 HNRNPA1P22 chr3 42889361 42890306 + processed_pseudogene KNOWN OTTHUMG00000156284.1 946 946 1 ENSG00000182983.13 ZNF662 chr3 42905731 42917641 + protein_coding KNOWN OTTHUMG00000133041.6 11911 5070 18 ENSG00000281085.1 AC092043.1 chr3 42927565 42927697 - miRNA NOVEL NA 133 133 1 ENSG00000206552.4 KRBOX1-AS1 chr3 42934252 42936785 - antisense NOVEL OTTHUMG00000156447.1 2534 2134 2 ENSG00000144649.7 FAM198A chr3 42979267 43060211 + protein_coding KNOWN OTTHUMG00000156449.4 80945 4411 20 ENSG00000060688.11 SNRNP40 chr1 31259568 31296782 - protein_coding KNOWN OTTHUMG00000003790.2 37215 3881 29 ENSG00000232375.1 RP11-136C24.1 chr3 43037121 43037451 + unprocessed_pseudogene KNOWN OTTHUMG00000156457.1 331 331 1 ENSG00000144647.5 POMGNT2 chr3 43079232 43106076 - protein_coding KNOWN OTTHUMG00000133038.2 26845 2668 5 ENSG00000227245.1 RP11-136C24.2 chr3 43087479 43088068 + lincRNA NOVEL OTTHUMG00000156464.1 590 509 2 ENSG00000222331.1 AC104434.1 chr3 43210741 43210871 - miRNA NOVEL NA 131 131 1 ENSG00000163788.12 SNRK chr3 43286512 43424764 + protein_coding KNOWN OTTHUMG00000156491.2 138253 6981 35 ENSG00000241939.3 RN7SL517P chr3 43314951 43315255 + misc_RNA KNOWN NA 305 305 1 ENSG00000271941.1 RP11-188P20.3 chr3 43346923 43347643 - antisense NOVEL OTTHUMG00000185494.1 721 721 1 ENSG00000234617.1 SNRK-AS1 chr3 43349644 43351962 - antisense NOVEL OTTHUMG00000156490.1 2319 750 3 ENSG00000160746.11 ANO10 chr3 43354859 43691594 - protein_coding KNOWN OTTHUMG00000133044.12 336736 5287 109 ENSG00000251811.1 Y_RNA chr3 43472477 43472596 + misc_RNA NOVEL NA 120 120 1 ENSG00000131584.17 ACAP3 chr1 1292376 1309609 - protein_coding KNOWN OTTHUMG00000002235.4 17234 8809 124 ENSG00000229447.2 RP11-490K7.4 chr1 31263245 31263681 - processed_pseudogene KNOWN OTTHUMG00000003793.2 437 437 1 ENSG00000223916.1 RP11-353H3.1 chr3 43484972 43485880 - processed_pseudogene KNOWN OTTHUMG00000156492.1 909 515 2 ENSG00000011198.6 ABHD5 chr3 43690113 43734371 + protein_coding KNOWN OTTHUMG00000133039.4 44259 3172 29 ENSG00000235886.1 RP4-672N11.1 chr3 43778961 43779982 - lincRNA NOVEL OTTHUMG00000156509.1 1022 411 3 ENSG00000271192.1 RP4-555D20.3 chr3 43996896 43997443 + lincRNA NOVEL OTTHUMG00000185193.1 548 548 1 ENSG00000272121.1 RP4-555D20.4 chr3 43998081 43999149 - lincRNA NOVEL OTTHUMG00000185495.1 1069 1069 1 ENSG00000252980.1 RNU6-367P chr3 44071087 44071186 + snRNA KNOWN NA 100 100 1 ENSG00000207954.1 MIR138-1 chr3 44114212 44114310 + miRNA KNOWN NA 99 99 1 ENSG00000280435.1 RP4-555D20.1 chr3 44115818 44117487 - TEC KNOWN OTTHUMG00000175703.1 1670 1670 1 ENSG00000261786.1 RP4-555D20.2 chr3 44117299 44122365 + lincRNA NOVEL OTTHUMG00000175704.1 5067 5067 1 ENSG00000173769.4 TOPAZ1 chr3 44241886 44332098 + protein_coding KNOWN OTTHUMG00000156172.1 90213 5334 20 ENSG00000121766.13 ZCCHC17 chr1 31296982 31364953 + protein_coding KNOWN OTTHUMG00000003791.2 67972 1921 77 ENSG00000271937.1 RP11-424N24.2 chr3 44337941 44338552 - antisense NOVEL OTTHUMG00000185518.1 612 612 1 ENSG00000179152.17 TCAIM chr3 44338119 44409451 + protein_coding KNOWN OTTHUMG00000133049.6 71333 8389 81 ENSG00000225873.1 LINC00694 chr3 44421127 44424007 - lincRNA NOVEL OTTHUMG00000156179.1 2881 732 2 ENSG00000185219.14 ZNF445 chr3 44439770 44477670 - protein_coding KNOWN OTTHUMG00000133042.3 37901 10821 31 ENSG00000178917.13 ZNF852 chr3 44498970 44510640 - protein_coding KNOWN OTTHUMG00000156453.2 11671 4229 13 ENSG00000214825.2 EI24P3 chr3 44524744 44525805 - processed_pseudogene KNOWN OTTHUMG00000156451.1 1062 1062 1 ENSG00000277509.1 RP11-944L7.6 chr3 44528955 44529391 - processed_pseudogene KNOWN OTTHUMG00000187588.1 437 437 1 ENSG00000196345.11 ZKSCAN7 chr3 44555193 44583483 + protein_coding KNOWN OTTHUMG00000186378.1 28291 4048 39 ENSG00000236869.1 RP11-944L7.4 chr3 44557357 44685653 - antisense KNOWN OTTHUMG00000156455.2 128297 456 3 ENSG00000273303.1 RP11-944L7.5 chr3 44565559 44594173 + protein_coding KNOWN OTTHUMG00000133094.7 28615 476 4 ENSG00000229044.1 RP11-266K22.2 chr1 31333067 31346799 - antisense NOVEL OTTHUMG00000003794.1 13733 439 3 ENSG00000144792.8 ZNF660 chr3 44578223 44599694 + protein_coding KNOWN OTTHUMG00000133097.4 21472 6513 12 ENSG00000214820.3 MPRIPP1 chr3 44579938 44581026 - processed_pseudogene KNOWN OTTHUMG00000156454.1 1089 1089 1 ENSG00000186448.13 ZNF197 chr3 44584888 44648471 + protein_coding KNOWN OTTHUMG00000133089.4 63584 6767 33 ENSG00000233509.2 ZNF197-AS1 chr3 44617128 44624797 - antisense KNOWN OTTHUMG00000156308.2 7670 623 2 ENSG00000280942.1 AC099669.1 chr3 44629284 44629372 + miRNA NOVEL NA 89 89 1 ENSG00000169981.9 ZNF35 chr3 44648727 44660791 + protein_coding KNOWN OTTHUMG00000133091.11 12065 2663 20 ENSG00000272077.1 RP11-348P10.2 chr3 44667412 44669364 + lincRNA KNOWN OTTHUMG00000185519.1 1953 1953 1 ENSG00000235805.1 SOCS5P3 chr3 44709311 44710886 - processed_pseudogene KNOWN OTTHUMG00000156450.1 1576 1576 1 ENSG00000196653.10 ZNF502 chr3 44712643 44723831 + protein_coding KNOWN OTTHUMG00000133086.4 11189 3273 13 ENSG00000186446.10 ZNF501 chr3 44729596 44737083 + protein_coding KNOWN OTTHUMG00000133048.4 7488 3910 14 ENSG00000121769.6 FABP3 chr1 31365625 31376850 - protein_coding KNOWN OTTHUMG00000003797.3 11226 1026 18 ENSG00000163807.5 KIAA1143 chr3 44737661 44761662 - protein_coding KNOWN OTTHUMG00000133088.3 24002 5259 7 ENSG00000163808.15 KIF15 chr3 44761717 44873376 + protein_coding KNOWN OTTHUMG00000156307.6 111660 5285 147 ENSG00000238958.1 AC098649.1 chr3 44793015 44793105 - miRNA NOVEL NA 91 91 1 ENSG00000169964.5 TMEM42 chr3 44861869 44865670 + protein_coding KNOWN OTTHUMG00000133092.2 3802 3106 5 ENSG00000207783.1 MIR564 chr3 44861888 44861981 + miRNA KNOWN NA 94 94 1 ENSG00000163810.10 TGM4 chr3 44874608 44914990 + protein_coding KNOWN OTTHUMG00000133096.4 40383 5443 30 ENSG00000235845.1 RP11-272D20.2 chr3 44899178 44900925 + antisense KNOWN OTTHUMG00000156317.1 1748 569 2 ENSG00000163812.12 ZDHHC3 chr3 44915257 44976185 - protein_coding KNOWN OTTHUMG00000133093.8 60929 7609 51 ENSG00000227123.1 RPL12P44 chr3 44937673 44938482 + processed_pseudogene KNOWN OTTHUMG00000156997.2 810 502 2 ENSG00000075914.11 EXOSC7 chr3 44975241 45036066 + protein_coding KNOWN OTTHUMG00000133095.2 60826 4442 57 ENSG00000168528.10 SERINC2 chr1 31409565 31434680 + protein_coding KNOWN OTTHUMG00000003796.2 25116 3549 57 ENSG00000163815.5 CLEC3B chr3 45001548 45036071 + protein_coding KNOWN OTTHUMG00000133087.2 34524 1105 9 ENSG00000252410.1 RNU5B-3P chr3 45034474 45034588 - snRNA KNOWN NA 115 115 1 ENSG00000163814.6 CDCP1 chr3 45082278 45146422 - protein_coding KNOWN OTTHUMG00000133090.3 64145 6507 16 ENSG00000224094.1 RPS24P8 chr3 45159774 45160175 - processed_pseudogene KNOWN OTTHUMG00000156988.1 402 402 1 ENSG00000249992.1 TMEM158 chr3 45224466 45226278 - protein_coding KNOWN OTTHUMG00000160317.2 1813 1813 1 ENSG00000202268.2 U3 chr3 45255409 45255620 - snoRNA NOVEL NA 212 212 1 ENSG00000011376.8 LARS2 chr3 45388506 45549421 + protein_coding KNOWN OTTHUMG00000133177.3 160916 5393 88 ENSG00000232455.2 LARS2-AS1 chr3 45483974 45509545 - antisense NOVEL OTTHUMG00000156654.2 25572 575 4 ENSG00000144791.8 LIMD1 chr3 45555394 45686338 + protein_coding KNOWN OTTHUMG00000133453.2 130945 12673 27 ENSG00000251927.1 AC099539.1 chr3 45592255 45592327 + miRNA NOVEL NA 73 73 1 ENSG00000279468.1 AC114494.1 chr1 31428912 31430497 - protein_coding KNOWN NA 1586 1586 1 ENSG00000230530.1 LIMD1-AS1 chr3 45679043 45689134 - antisense NOVEL OTTHUMG00000156652.1 10092 1651 4 ENSG00000211456.9 SACM1L chr3 45689056 45745424 + protein_coding KNOWN OTTHUMG00000156653.5 56369 7352 138 ENSG00000244357.3 RN7SL145P chr3 45742675 45742970 + misc_RNA KNOWN NA 296 296 1 ENSG00000279017.1 RP11-697K23.3 chr3 45749627 45750651 + TEC KNOWN OTTHUMG00000175706.1 1025 1025 1 ENSG00000163817.14 SLC6A20 chr3 45755450 45796535 - protein_coding KNOWN OTTHUMG00000133446.8 41086 6651 50 ENSG00000163818.15 LZTFL1 chr3 45823316 45916042 - protein_coding KNOWN OTTHUMG00000133452.11 92727 7201 110 ENSG00000236930.1 RP11-852E15.1 chr3 45883640 45884113 - processed_pseudogene KNOWN OTTHUMG00000156563.1 474 474 1 ENSG00000173585.14 CCR9 chr3 45886504 45903177 + protein_coding KNOWN OTTHUMG00000133450.4 16674 2809 15 ENSG00000201635.1 Y_RNA chr3 45903187 45903298 + misc_RNA NOVEL NA 112 112 1 ENSG00000163820.13 FYCO1 chr3 45917899 45995824 - protein_coding KNOWN OTTHUMG00000133447.4 77926 8895 52 ENSG00000215899.3 RP11-439L8.2 chr1 31487589 31488930 - processed_pseudogene KNOWN OTTHUMG00000003878.3 1342 1342 1 ENSG00000172215.5 CXCR6 chr3 45940933 45948353 + protein_coding KNOWN OTTHUMG00000133448.2 7421 3769 7 ENSG00000173578.7 XCR1 chr3 46017024 46027742 - protein_coding KNOWN OTTHUMG00000133449.2 10719 5403 5 ENSG00000226933.1 NRBF2P2 chr3 46023296 46024156 + processed_pseudogene KNOWN OTTHUMG00000156499.1 861 861 1 ENSG00000229515.1 FLT1P1 chr3 46142358 46143677 - processed_pseudogene KNOWN OTTHUMG00000156234.1 1320 1320 1 ENSG00000183625.13 CCR3 chr3 46163604 46266706 + protein_coding KNOWN OTTHUMG00000133484.2 103103 3568 20 ENSG00000163823.3 CCR1 chr3 46201709 46208396 - protein_coding KNOWN OTTHUMG00000133451.2 6688 2731 2 ENSG00000236736.1 UQCRC2P1 chr3 46310591 46311922 - processed_pseudogene KNOWN OTTHUMG00000156315.1 1332 1332 1 ENSG00000121807.5 CCR2 chr3 46353734 46360928 + protein_coding KNOWN OTTHUMG00000156466.1 7195 3733 12 ENSG00000223552.1 RP11-24F11.2 chr3 46364955 46407059 - antisense NOVEL OTTHUMG00000156326.1 42105 656 4 ENSG00000160791.13 CCR5 chr3 46370854 46376206 + protein_coding KNOWN OTTHUMG00000133481.2 5353 3672 3 ENSG00000206981.1 RNU6-40P chr1 31497577 31497683 - snRNA KNOWN NA 107 107 1 ENSG00000121797.9 CCRL2 chr3 46407163 46412997 + protein_coding KNOWN OTTHUMG00000156318.3 5835 3061 14 ENSG00000012223.11 LTF chr3 46435645 46485234 - protein_coding KNOWN OTTHUMG00000156325.16 49590 4247 91 ENSG00000163825.3 RTP3 chr3 46497491 46500949 + protein_coding KNOWN OTTHUMG00000133483.2 3459 1321 2 ENSG00000163827.11 LRRC2 chr3 46515423 46580099 - protein_coding KNOWN OTTHUMG00000133479.2 64677 5622 22 ENSG00000264306.1 AC104304.1 chr3 46550506 46550557 - miRNA NOVEL NA 52 52 1 ENSG00000268324.2 LRRC2-AS1 chr3 46557398 46559694 + antisense KNOWN OTTHUMG00000187144.1 2297 2297 4 ENSG00000241186.6 TDGF1 chr3 46574555 46626543 + protein_coding KNOWN OTTHUMG00000133482.2 51989 5013 28 ENSG00000251967.1 SNORD77 chr3 46650510 46650590 + snoRNA NOVEL NA 81 81 1 ENSG00000178038.15 ALS2CL chr3 46668997 46693704 - protein_coding KNOWN OTTHUMG00000128673.6 24708 9057 174 ENSG00000181585.3 TMIE chr3 46701333 46710886 + protein_coding KNOWN OTTHUMG00000149909.1 9554 1824 4 ENSG00000260386.4 LINC01225 chr1 31500085 31540885 + unitary_pseudogene KNOWN OTTHUMG00000174814.2 40801 3760 29 ENSG00000206549.11 PRSS50 chr3 46712116 46812574 - protein_coding KNOWN OTTHUMG00000164067.1 100459 2959 17 ENSG00000261603.1 PRSS46 chr3 46719583 46736429 - protein_coding KNOWN OTTHUMG00000177121.10 16847 982 4 ENSG00000188086.11 PRSS45 chr3 46742092 46812558 - protein_coding KNOWN OTTHUMG00000133480.6 70467 3229 18 ENSG00000238013.1 RP11-427P5.2 chr3 46798123 46798390 + processed_pseudogene KNOWN OTTHUMG00000156523.1 268 268 1 ENSG00000226074.4 PRSS44 chr3 46809359 46812558 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000154622.2 3200 1146 7 ENSG00000178055.11 PRSS42 chr3 46829542 46834095 - protein_coding KNOWN OTTHUMG00000156496.3 4554 1857 8 ENSG00000160808.8 MYL3 chr3 46857872 46882169 - protein_coding KNOWN OTTHUMG00000133516.4 24298 1360 17 ENSG00000160801.12 PTH1R chr3 46877746 46903799 + protein_coding KNOWN OTTHUMG00000133515.4 26054 2758 100 ENSG00000273682.1 RP11-427P5.3 chr3 46918807 46918935 - processed_pseudogene KNOWN OTTHUMG00000187552.1 129 129 1 ENSG00000160799.10 CCDC12 chr3 46921726 46982010 - protein_coding KNOWN OTTHUMG00000133513.4 60285 4754 56 ENSG00000265961.1 Y_RNA chr1 31503631 31503744 - misc_RNA NOVEL NA 114 114 1 ENSG00000160796.15 NBEAL2 chr3 46979683 47009703 + protein_coding KNOWN OTTHUMG00000156497.4 30021 9819 154 ENSG00000236409.1 NRADDP chr3 47011542 47013146 + unitary_pseudogene KNOWN OTTHUMG00000154641.1 1605 691 4 ENSG00000181555.18 SETD2 chr3 47016429 47163967 - protein_coding KNOWN OTTHUMG00000133514.3 147539 10019 91 ENSG00000275940.1 MRP63P3 chr3 47028855 47029030 + processed_pseudogene KNOWN OTTHUMG00000187555.1 176 176 1 ENSG00000227398.3 KIF9-AS1 chr3 47164497 47246601 + antisense NOVEL OTTHUMG00000156533.3 82105 4898 7 ENSG00000088727.11 KIF9 chr3 47228026 47283451 - protein_coding KNOWN OTTHUMG00000133512.3 55426 5850 143 ENSG00000239128.1 snoU13 chr3 47250523 47250626 - snoRNA NOVEL NA 104 104 1 ENSG00000114648.10 KLHL18 chr3 47282917 47346816 + protein_coding KNOWN OTTHUMG00000156522.2 63900 7064 36 ENSG00000280173.1 RP11-447D11.3 chr3 47346950 47349073 + TEC KNOWN OTTHUMG00000175707.1 2124 2124 1 ENSG00000260236.1 RP11-708J19.1 chr3 47379089 47380999 - antisense NOVEL OTTHUMG00000175709.1 1911 1911 1 ENSG00000278073.1 MIR6726 chr1 1296110 1296170 - miRNA KNOWN NA 61 61 1 ENSG00000223907.1 LINC01226 chr1 31518435 31524245 + lincRNA NOVEL OTTHUMG00000003882.2 5811 2741 5 ENSG00000076201.13 PTPN23 chr3 47381011 47413441 + protein_coding KNOWN OTTHUMG00000133520.4 32431 5981 64 ENSG00000114650.17 SCAP chr3 47413694 47477126 - protein_coding KNOWN OTTHUMG00000125539.12 63433 6301 130 ENSG00000276925.1 RP11-708J19.3 chr3 47469777 47469987 + processed_pseudogene KNOWN OTTHUMG00000187557.1 211 211 1 ENSG00000163832.14 ELP6 chr3 47495640 47513761 - protein_coding KNOWN OTTHUMG00000133521.12 18122 3313 75 ENSG00000271161.1 BOLA2P2 chr3 47499841 47500407 + transcribed_processed_pseudogene KNOWN OTTHUMG00000184335.1 567 567 2 ENSG00000280667.1 Y_RNA chr3 47501083 47501182 + misc_RNA NOVEL NA 100 100 1 ENSG00000266443.1 AC099778.1 chr3 47540014 47540100 - miRNA NOVEL NA 87 87 1 ENSG00000244732.3 RN7SL870P chr3 47560229 47560524 - misc_RNA KNOWN NA 296 296 1 ENSG00000114646.8 CSPG5 chr3 47562239 47580792 - protein_coding KNOWN OTTHUMG00000133518.2 18554 4366 20 ENSG00000173473.9 SMARCC1 chr3 47585272 47782106 - protein_coding KNOWN OTTHUMG00000133519.2 196835 7645 84 ENSG00000260636.1 RP11-439L8.5 chr1 31538044 31540769 + sense_intronic NOVEL OTTHUMG00000175547.1 2726 354 3 ENSG00000214773.1 RP11-717D12.1 chr3 47601715 47604677 - sense_intronic NOVEL OTTHUMG00000179466.1 2963 1428 2 ENSG00000235695.1 RP11-395P16.1 chr3 47663626 47663934 + processed_pseudogene KNOWN OTTHUMG00000156834.1 309 309 1 ENSG00000266457.1 AC026318.1 chr3 47769111 47769211 + miRNA NOVEL NA 101 101 1 ENSG00000132153.13 DHX30 chr3 47802909 47850195 + protein_coding KNOWN OTTHUMG00000133522.2 47287 7744 170 ENSG00000274420.1 uc_338 chr3 47818005 47818128 + misc_RNA NOVEL NA 124 124 1 ENSG00000221585.1 MIR1226 chr3 47849555 47849629 + miRNA KNOWN NA 75 75 1 ENSG00000047849.20 MAP4 chr3 47850690 48089272 - protein_coding KNOWN OTTHUMG00000156828.4 238583 14896 117 ENSG00000199591.1 Y_RNA chr3 47931808 47931914 - misc_RNA NOVEL NA 107 107 1 ENSG00000224895.1 VPS26BP1 chr3 47960327 47961081 - processed_pseudogene KNOWN OTTHUMG00000156831.1 755 755 1 ENSG00000270285.1 RP11-1029M24.4 chr3 48039267 48039490 + processed_pseudogene KNOWN OTTHUMG00000184332.1 224 224 1 ENSG00000229167.1 RP11-73M7.1 chr1 31571585 31575573 - antisense NOVEL OTTHUMG00000003875.1 3989 591 3 ENSG00000281068.1 AC124916.1 chr3 48094801 48094876 - miRNA NOVEL NA 76 76 1 ENSG00000265078.2 RN7SL664P chr3 48094801 48095105 - misc_RNA KNOWN NA 305 305 1 ENSG00000281238.1 AC124916.2 chr3 48094888 48094957 - miRNA NOVEL NA 70 70 1 ENSG00000236768.1 RP11-1029M24.1 chr3 48120669 48121215 - processed_pseudogene KNOWN OTTHUMG00000156830.1 547 547 1 ENSG00000164045.10 CDC25A chr3 48157146 48188402 - protein_coding KNOWN OTTHUMG00000133535.4 31257 4117 48 ENSG00000235627.1 SNRPFP4 chr3 48161176 48161417 + processed_pseudogene KNOWN OTTHUMG00000156827.2 242 242 1 ENSG00000253056.1 RNU7-128P chr3 48180328 48180389 + snRNA KNOWN NA 62 62 1 ENSG00000231884.1 NDUFB1P1 chr3 48181547 48181726 + processed_pseudogene KNOWN OTTHUMG00000156836.1 180 180 1 ENSG00000265483.1 MIR4443 chr3 48196564 48196616 + miRNA KNOWN NA 53 53 1 ENSG00000164047.4 CAMP chr3 48223347 48225491 + protein_coding KNOWN OTTHUMG00000133526.2 2145 745 4 ENSG00000142910.14 TINAGL1 chr1 31576485 31587686 + protein_coding KNOWN OTTHUMG00000003884.1 11202 5281 78 ENSG00000164048.12 ZNF589 chr3 48241100 48299253 + protein_coding KNOWN OTTHUMG00000156833.3 58154 5521 32 ENSG00000229759.1 MRPS18AP1 chr3 48256350 48256938 - processed_pseudogene KNOWN OTTHUMG00000156829.1 589 589 1 ENSG00000199476.1 Y_RNA chr3 48288587 48288694 + misc_RNA NOVEL NA 108 108 1 ENSG00000228638.1 FCF1P2 chr3 48290793 48291375 - processed_pseudogene KNOWN OTTHUMG00000156835.1 583 583 1 ENSG00000172113.7 NME6 chr3 48293264 48301685 - protein_coding KNOWN OTTHUMG00000133531.4 8422 4716 91 ENSG00000229453.2 SPINK8 chr3 48306842 48328341 - protein_coding KNOWN OTTHUMG00000156832.2 21500 444 5 ENSG00000252466.1 MIR2115 chr3 48316360 48316459 - miRNA KNOWN NA 100 100 1 ENSG00000164049.13 FBXW12 chr3 48372219 48401259 + protein_coding KNOWN OTTHUMG00000133530.4 29041 3488 57 ENSG00000277483.1 Metazoa_SRP chr3 48379834 48380132 + misc_RNA NOVEL NA 299 299 1 ENSG00000164050.11 PLXNB1 chr3 48403854 48430051 - protein_coding KNOWN OTTHUMG00000133527.5 26198 9733 198 ENSG00000121764.10 HCRTR1 chr1 31617686 31632518 + protein_coding KNOWN OTTHUMG00000003876.1 14833 2558 37 ENSG00000164051.12 CCDC51 chr3 48432164 48440456 - protein_coding KNOWN OTTHUMG00000133534.26 8293 2410 21 ENSG00000232112.3 TMA7 chr3 48440257 48444208 + protein_coding KNOWN OTTHUMG00000156588.3 3952 1139 9 ENSG00000244380.1 RP11-24C3.2 chr3 48440352 48446656 - antisense NOVEL OTTHUMG00000156589.2 6305 1051 5 ENSG00000280804.1 TREX1 chr3 48446710 48467645 + protein_coding KNOWN OTTHUMG00000190127.2 20936 4725 50 ENSG00000164053.16 ATRIP chr3 48446710 48465716 + protein_coding KNOWN OTTHUMG00000133532.5 19007 3334 54 ENSG00000213689.8 TREX1 chr3 48465811 48467645 + protein_coding KNOWN OTTHUMG00000156205.6 1835 1835 13 ENSG00000164054.14 SHISA5 chr3 48467798 48504826 - protein_coding KNOWN OTTHUMG00000133529.19 37029 4664 92 ENSG00000264209.1 AC134772.1 chr3 48488492 48488585 - miRNA NOVEL NA 94 94 1 ENSG00000114268.10 PFKFB4 chr3 48517684 48562015 - protein_coding KNOWN OTTHUMG00000133528.19 44332 6107 134 ENSG00000278799.1 MIR6823 chr3 48549961 48550021 - miRNA KNOWN NA 61 61 1 ENSG00000162517.11 PEF1 chr1 31629862 31644896 - protein_coding KNOWN OTTHUMG00000003877.2 15035 2227 30 ENSG00000145040.3 UCN2 chr3 48561727 48563773 - protein_coding KNOWN OTTHUMG00000133533.1 2047 1481 2 ENSG00000114270.14 COL7A1 chr3 48564073 48595267 - protein_coding KNOWN OTTHUMG00000133541.3 31195 11071 243 ENSG00000211535.1 MIR711 chr3 48578902 48578977 - miRNA KNOWN NA 76 76 1 ENSG00000010256.9 UQCRC1 chr3 48599002 48610976 - protein_coding KNOWN OTTHUMG00000133539.3 11975 3236 61 ENSG00000183396.3 TMEM89 chr3 48620759 48621855 - protein_coding KNOWN OTTHUMG00000156647.1 1097 662 2 ENSG00000225697.9 SLC26A6 chr3 48625723 48635493 - protein_coding KNOWN OTTHUMG00000186381.1 9771 6373 261 ENSG00000274831.1 MIR6824 chr3 48633636 48633698 - miRNA KNOWN NA 63 63 1 ENSG00000008300.13 CELSR3 chr3 48636469 48662915 - protein_coding KNOWN OTTHUMG00000133544.2 26447 13873 50 ENSG00000263898.1 MIR4793 chr3 48644194 48644280 - miRNA KNOWN NA 87 87 1 ENSG00000228350.1 CELSR3-AS1 chr3 48663776 48669174 + antisense NOVEL OTTHUMG00000156627.1 5399 196 3 ENSG00000235790.6 RP11-73M7.6 chr1 31644049 31660162 + antisense NOVEL OTTHUMG00000003881.6 16114 2216 105 ENSG00000271973.1 RP11-572O6.1 chr3 48672455 48672733 + lincRNA NOVEL OTTHUMG00000185525.1 279 279 1 ENSG00000213672.6 NCKIPSD chr3 48673844 48686364 - protein_coding KNOWN OTTHUMG00000133542.3 12521 3431 60 ENSG00000068745.13 IP6K2 chr3 48688003 48740353 - protein_coding KNOWN OTTHUMG00000133543.5 52351 5624 104 ENSG00000274388.1 AC141002.1 chr3 48729731 48729798 + miRNA NOVEL NA 68 68 1 ENSG00000114302.14 PRKAR2A chr3 48744597 48847846 - protein_coding KNOWN OTTHUMG00000133540.3 103250 6644 49 ENSG00000224424.7 PRKAR2A-AS1 chr3 48847572 48851981 + antisense NOVEL OTTHUMG00000156671.2 4410 3917 9 ENSG00000178537.8 SLC25A20 chr3 48856931 48898993 - protein_coding KNOWN OTTHUMG00000133538.3 42063 1982 28 ENSG00000221883.2 ARIH2OS chr3 48917788 48919385 - protein_coding KNOWN OTTHUMG00000156672.1 1598 1598 1 ENSG00000177479.18 ARIH2 chr3 48918821 48986382 + protein_coding KNOWN OTTHUMG00000133547.15 67562 8017 176 ENSG00000235236.1 RP13-131K19.1 chr3 48979918 48983985 - antisense NOVEL OTTHUMG00000156717.1 4068 660 4 ENSG00000264078.1 RP11-73M7.9 chr1 31644694 31649371 + antisense NOVEL OTTHUMG00000179423.1 4678 480 2 ENSG00000223343.1 RP13-131K19.2 chr3 48985049 48989988 - antisense NOVEL OTTHUMG00000156716.1 4940 782 2 ENSG00000273211.1 RP13-131K19.7 chr3 48985485 48985963 - lincRNA NOVEL OTTHUMG00000185890.1 479 479 1 ENSG00000178467.16 P4HTM chr3 48989886 49007154 + protein_coding KNOWN OTTHUMG00000074057.4 17269 7641 54 ENSG00000178252.16 WDR6 chr3 49007062 49015953 + protein_coding KNOWN OTTHUMG00000133546.11 8892 5304 92 ENSG00000178149.15 DALRD3 chr3 49015488 49022293 - protein_coding KNOWN OTTHUMG00000156748.3 6806 3682 106 ENSG00000199032.1 MIR425 chr3 49020148 49020234 - miRNA KNOWN NA 87 87 1 ENSG00000178057.13 NDUFAF3 chr3 49020459 49023495 + protein_coding KNOWN OTTHUMG00000156773.2 3037 2434 27 ENSG00000207605.2 MIR191 chr3 49020602 49020714 - miRNA KNOWN NA 113 113 1 ENSG00000178035.10 IMPDH2 chr3 49024325 49029408 - protein_coding KNOWN OTTHUMG00000156771.1 5084 2773 64 ENSG00000272434.1 RP13-131K19.6 chr3 49029316 49029706 + antisense NOVEL OTTHUMG00000185526.1 391 391 1 ENSG00000084636.16 COL16A1 chr1 31652247 31704319 - protein_coding KNOWN OTTHUMG00000003883.15 52073 9269 272 ENSG00000198218.9 QRICH1 chr3 49029707 49094363 - protein_coding KNOWN OTTHUMG00000156772.1 64657 5499 63 ENSG00000241461.3 RN7SL182P chr3 49083233 49083532 + misc_RNA KNOWN NA 300 300 1 ENSG00000172053.13 QARS chr3 49095932 49105101 - protein_coding KNOWN OTTHUMG00000156774.4 9170 4490 211 ENSG00000274888.1 MIR6890 chr3 49099854 49099914 - miRNA KNOWN NA 61 61 1 ENSG00000172046.17 USP19 chr3 49108046 49120938 - protein_coding KNOWN OTTHUMG00000133611.5 12893 5731 224 ENSG00000172037.12 LAMB2 chr3 49121114 49133118 - protein_coding KNOWN OTTHUMG00000156807.3 12005 6865 118 ENSG00000270441.1 RP11-694I15.7 chr3 49140086 49160851 - unprocessed_pseudogene KNOWN OTTHUMG00000184392.1 20766 1799 14 ENSG00000177352.9 CCDC71 chr3 49162535 49166321 - protein_coding KNOWN OTTHUMG00000156815.2 3787 1781 2 ENSG00000185909.13 KLHDC8B chr3 49171611 49176486 + protein_coding KNOWN OTTHUMG00000156814.3 4876 2158 18 ENSG00000236980.8 C3orf84 chr3 49177632 49191858 - protein_coding KNOWN OTTHUMG00000156816.2 14227 883 11 ENSG00000121753.11 BAI2 chr1 31727117 31764893 - protein_coding KNOWN OTTHUMG00000003885.4 37777 7756 267 ENSG00000173421.15 CCDC36 chr3 49198428 49258104 + protein_coding KNOWN OTTHUMG00000155920.3 59677 4330 33 ENSG00000270538.1 RP11-3B7.7 chr3 49252129 49252264 - processed_pseudogene KNOWN OTTHUMG00000184387.1 136 136 1 ENSG00000225399.4 RP11-3B7.1 chr3 49260085 49261316 + lincRNA NOVEL OTTHUMG00000156818.1 1232 1232 2 ENSG00000188315.6 C3orf62 chr3 49268602 49277909 - protein_coding KNOWN OTTHUMG00000156819.2 9308 4813 12 ENSG00000199546.1 Y_RNA chr3 49270132 49270239 + misc_RNA NOVEL NA 108 108 1 ENSG00000264633.1 MIR4271 chr3 49274120 49274186 + miRNA KNOWN NA 67 67 1 ENSG00000114316.11 USP4 chr3 49277831 49340712 - protein_coding KNOWN OTTHUMG00000156825.2 62882 6659 124 ENSG00000281433.1 Metazoa_SRP chr3 49320296 49320564 + misc_RNA NOVEL NA 269 269 1 ENSG00000233276.3 GPX1 chr3 49357176 49358600 - protein_coding KNOWN OTTHUMG00000156837.1 1425 1425 8 ENSG00000067560.9 RHOA chr3 49359145 49412998 - protein_coding KNOWN OTTHUMG00000156838.5 53854 2582 26 ENSG00000169972.10 PUSL1 chr1 1308567 1311677 + protein_coding KNOWN OTTHUMG00000003361.2 3111 2489 26 ENSG00000266580.1 MIR4254 chr1 31758660 31758735 - miRNA KNOWN NA 76 76 1 ENSG00000235908.1 RHOA-IT1 chr3 49365145 49367006 - sense_intronic NOVEL OTTHUMG00000156844.1 1862 517 2 ENSG00000145022.4 TCTA chr3 49412206 49416475 + protein_coding KNOWN OTTHUMG00000156846.2 4270 2747 15 ENSG00000145020.13 AMT chr3 49416778 49422753 - protein_coding KNOWN OTTHUMG00000156847.5 5976 4561 122 ENSG00000145029.10 NICN1 chr3 49422946 49429326 - protein_coding KNOWN OTTHUMG00000156848.4 6381 2929 42 ENSG00000201301.1 RNA5SP130 chr3 49467115 49467228 - rRNA KNOWN NA 114 114 1 ENSG00000173402.10 DAG1 chr3 49468703 49535618 + protein_coding KNOWN OTTHUMG00000156869.5 66916 6923 73 ENSG00000226913.1 BSN-AS2 chr3 49549306 49554366 - lincRNA NOVEL OTTHUMG00000156881.1 5061 2603 6 ENSG00000164061.4 BSN chr3 49554489 49671545 + protein_coding KNOWN OTTHUMG00000133750.1 117057 16225 14 ENSG00000235120.1 BSN-AS1 chr3 49640483 49641769 - antisense NOVEL OTTHUMG00000156880.1 1287 461 2 ENSG00000281001.1 AC099668.1 chr3 49665262 49665391 + miRNA NOVEL NA 130 130 1 ENSG00000254545.1 RP11-84A19.3 chr1 31789130 31791322 + antisense NOVEL OTTHUMG00000165113.1 2193 537 2 ENSG00000164062.11 APEH chr3 49674002 49683963 + protein_coding KNOWN OTTHUMG00000156882.3 9962 4669 144 ENSG00000173531.14 MST1 chr3 49683947 49689501 - protein_coding KNOWN OTTHUMG00000155918.6 5555 5084 119 ENSG00000259970.1 AC099668.5 chr3 49684480 49684983 - processed_transcript NOVEL OTTHUMG00000155919.2 504 423 2 ENSG00000164068.14 RNF123 chr3 49689499 49721529 + protein_coding KNOWN OTTHUMG00000156891.5 32031 7458 222 ENSG00000176020.8 AMIGO3 chr3 49716834 49719695 - protein_coding KNOWN OTTHUMG00000158152.1 2862 2862 1 ENSG00000173540.11 GMPPB chr3 49716844 49723951 - protein_coding KNOWN OTTHUMG00000158151.1 7108 6742 33 ENSG00000176095.10 IP6K1 chr3 49724294 49786542 - protein_coding KNOWN OTTHUMG00000158197.1 62249 5200 37 ENSG00000239576.1 COX6CP14 chr3 49758483 49758656 + processed_pseudogene KNOWN OTTHUMG00000158196.1 174 174 1 ENSG00000244730.1 RP13-1056D16.2 chr3 49775285 49775614 + processed_pseudogene KNOWN OTTHUMG00000158199.1 330 330 1 ENSG00000187492.7 CDHR4 chr3 49790732 49799835 - protein_coding KNOWN OTTHUMG00000158198.2 9104 3163 42 ENSG00000134668.11 SPOCD1 chr1 31790422 31816051 - protein_coding KNOWN OTTHUMG00000003879.4 25630 7085 101 ENSG00000185614.4 FAM212A chr3 49803254 49805030 + protein_coding KNOWN OTTHUMG00000158268.1 1777 1040 2 ENSG00000182179.9 UBA7 chr3 49805207 49813946 - protein_coding KNOWN OTTHUMG00000158267.2 8740 4545 55 ENSG00000263506.1 MIR5193 chr3 49806137 49806245 - miRNA KNOWN NA 109 109 1 ENSG00000263651.1 AC139451.1 chr3 49818954 49819053 - miRNA NOVEL NA 100 100 1 ENSG00000183763.7 TRAIP chr3 49828599 49856574 - protein_coding KNOWN OTTHUMG00000158269.2 27976 3263 73 ENSG00000164076.15 CAMKV chr3 49857988 49870222 - protein_coding KNOWN OTTHUMG00000158288.6 12235 3900 140 ENSG00000264706.2 RN7SL217P chr3 49863375 49863660 - misc_RNA KNOWN NA 286 286 1 ENSG00000281278.1 AC139451.2 chr3 49863381 49863464 - miRNA NOVEL NA 84 84 1 ENSG00000234667.1 ACTBP13 chr3 49873347 49877980 - unitary_pseudogene KNOWN OTTHUMG00000154689.1 4634 4634 1 ENSG00000164078.11 MST1R chr3 49887002 49903873 - protein_coding KNOWN OTTHUMG00000156709.5 16872 5252 132 ENSG00000203620.2 RP11-84A19.2 chr1 31842019 31855568 - lincRNA NOVEL OTTHUMG00000003927.1 13550 2257 2 ENSG00000230698.1 CTD-2330K9.2 chr3 49899302 49903757 + antisense NOVEL OTTHUMG00000156715.1 4456 544 2 ENSG00000228008.1 CTD-2330K9.3 chr3 49903845 49916937 + antisense NOVEL OTTHUMG00000156735.2 13093 921 6 ENSG00000164077.12 MON1A chr3 49908862 49930173 - protein_coding KNOWN OTTHUMG00000156737.6 21312 4532 33 ENSG00000004534.13 RBM6 chr3 49940007 50100045 + protein_coding KNOWN OTTHUMG00000156736.11 160039 7302 203 ENSG00000003756.15 RBM5 chr3 50088908 50119021 + protein_coding KNOWN OTTHUMG00000156785.7 30114 10368 166 ENSG00000281691.1 RBM5-AS1 chr3 50099603 50100988 - antisense KNOWN OTTHUMG00000189567.1 1386 1386 1 ENSG00000235016.1 SEMA3F-AS1 chr3 50116022 50156085 - antisense NOVEL OTTHUMG00000156795.1 40064 2949 6 ENSG00000001617.10 SEMA3F chr3 50155045 50189075 + protein_coding KNOWN OTTHUMG00000156806.7 34031 4826 87 ENSG00000207922.1 MIR566 chr3 50173326 50173419 + miRNA KNOWN NA 94 94 1 ENSG00000114349.8 GNAT1 chr3 50191612 50196516 + protein_coding KNOWN OTTHUMG00000156808.1 4905 2754 28 ENSG00000269967.1 RP11-84A19.4 chr1 31851913 31921841 - lincRNA NOVEL OTTHUMG00000184139.1 69929 587 2 ENSG00000188338.13 SLC38A3 chr3 50205246 50221486 + protein_coding KNOWN OTTHUMG00000156764.6 16241 3968 58 ENSG00000114353.15 GNAI2 chr3 50226292 50259355 + protein_coding KNOWN OTTHUMG00000156940.1 33064 7650 87 ENSG00000275334.1 MIR5787 chr3 50227436 50227490 + miRNA KNOWN NA 55 55 1 ENSG00000213600.3 XXcos-LUCA16.1 chr3 50239618 50239984 + sense_intronic NOVEL OTTHUMG00000186575.1 367 367 1 ENSG00000230454.1 U73166.2 chr3 50260303 50263358 + lincRNA NOVEL OTTHUMG00000156937.1 3056 2625 6 ENSG00000232352.1 SEMA3B-AS1 chr3 50266641 50267371 - antisense NOVEL OTTHUMG00000156955.1 731 338 2 ENSG00000012171.16 SEMA3B chr3 50267558 50277546 + protein_coding KNOWN OTTHUMG00000156970.5 9989 5768 177 ENSG00000274596.1 MIR6872 chr3 50273236 50273297 + miRNA KNOWN NA 62 62 1 ENSG00000179564.3 LSMEM2 chr3 50279027 50288114 + protein_coding KNOWN OTTHUMG00000156938.1 9088 1494 4 ENSG00000214706.9 IFRD2 chr3 50287732 50292918 - protein_coding KNOWN OTTHUMG00000156935.3 5187 3712 87 ENSG00000184007.16 PTP4A2 chr1 31906421 31944856 - protein_coding KNOWN OTTHUMG00000003801.9 38436 6431 74 ENSG00000186792.14 HYAL3 chr3 50292828 50299468 - protein_coding KNOWN OTTHUMG00000156936.2 6641 2036 23 ENSG00000243477.4 NAT6 chr3 50296402 50299421 - protein_coding KNOWN OTTHUMG00000156939.2 3020 2188 15 ENSG00000114378.15 HYAL1 chr3 50299889 50312381 - protein_coding KNOWN OTTHUMG00000156941.1 12493 3132 32 ENSG00000068001.12 HYAL2 chr3 50317790 50322906 - protein_coding KNOWN OTTHUMG00000156876.1 5117 4545 30 ENSG00000114383.8 TUSC2 chr3 50320027 50328251 - protein_coding KNOWN OTTHUMG00000156877.1 8225 2406 20 ENSG00000068028.16 RASSF1 chr3 50329782 50340980 - protein_coding KNOWN OTTHUMG00000149958.6 11199 3683 44 ENSG00000281358.1 RASSF1-AS1 chr3 50337511 50338300 + antisense KNOWN OTTHUMG00000189572.1 790 790 1 ENSG00000235058.1 ZMYND10-AS1 chr3 50341106 50345697 + antisense NOVEL OTTHUMG00000156875.1 4592 250 2 ENSG00000004838.12 ZMYND10 chr3 50341110 50346852 - protein_coding KNOWN OTTHUMG00000156874.5 5743 4009 58 ENSG00000114388.11 NPRL2 chr3 50347330 50351091 - protein_coding KNOWN OTTHUMG00000156864.2 3762 3677 121 ENSG00000281319.1 AL136115.1 chr1 31928144 31928300 - miRNA NOVEL NA 157 157 1 ENSG00000114395.9 CYB561D2 chr3 50350695 50358460 + protein_coding KNOWN OTTHUMG00000156813.4 7766 2086 19 ENSG00000272104.1 XXcos-LUCA11.5 chr3 50350892 50367923 + protein_coding PUTATIVE OTTHUMG00000185535.1 17032 408 4 ENSG00000126062.3 TMEM115 chr3 50354749 50359610 - protein_coding KNOWN OTTHUMG00000044212.3 4862 2197 2 ENSG00000007402.10 CACNA2D2 chr3 50362799 50504244 - protein_coding KNOWN OTTHUMG00000156887.3 141446 6322 238 ENSG00000271858.4 CYB561D2 chr3 50365334 50368197 + antisense NOVEL OTTHUMG00000185536.1 2864 1202 16 ENSG00000202322.1 RNA5SP131 chr3 50419781 50419899 + rRNA KNOWN NA 119 119 1 ENSG00000088543.13 C3orf18 chr3 50558025 50571027 - protein_coding KNOWN OTTHUMG00000156854.6 13003 3248 47 ENSG00000114735.8 HEMK1 chr3 50569152 50596168 + protein_coding KNOWN OTTHUMG00000156849.2 27017 19425 57 ENSG00000280382.1 RP11-804H8.7 chr3 50599879 50601148 - lincRNA NOVEL OTTHUMG00000189232.1 1270 339 4 ENSG00000114737.14 CISH chr3 50606490 50611831 - protein_coding KNOWN OTTHUMG00000156853.1 5342 5112 9 ENSG00000228634.1 RP4-534N18.2 chr1 31933020 31933975 + lincRNA NOVEL OTTHUMG00000004135.2 956 517 2 ENSG00000114738.9 MAPKAPK3 chr3 50611520 50649297 + protein_coding KNOWN OTTHUMG00000156850.10 37778 3921 57 ENSG00000273356.1 RP11-804H8.6 chr3 50669989 50672048 + lincRNA NOVEL OTTHUMG00000175710.2 2060 2060 3 ENSG00000272543.1 MIR4787 chr3 50675080 50675163 + miRNA KNOWN NA 84 84 1 ENSG00000088538.12 DOCK3 chr3 50675241 51384198 + protein_coding KNOWN OTTHUMG00000156892.5 708958 8755 53 ENSG00000228337.1 RP11-804H8.5 chr3 50685551 50685791 - processed_pseudogene KNOWN OTTHUMG00000156855.1 241 241 1 ENSG00000213587.3 RP11-646D13.1 chr3 50719482 50719951 - processed_pseudogene KNOWN OTTHUMG00000156851.1 470 470 1 ENSG00000235278.2 ZNF652P1 chr3 50786674 50788285 - processed_pseudogene KNOWN OTTHUMG00000156856.1 1612 1309 2 ENSG00000240959.1 ST13P14 chr3 50876712 50877657 - processed_pseudogene KNOWN OTTHUMG00000156852.2 946 734 2 ENSG00000281824.1 AC144634.1 chr3 51021667 51021779 - miRNA NOVEL NA 113 113 1 ENSG00000145050.14 MANF chr3 51385047 51389397 + protein_coding KNOWN OTTHUMG00000156897.5 4351 2111 18 ENSG00000121774.16 KHDRBS1 chr1 32013829 32060850 + protein_coding KNOWN OTTHUMG00000003921.8 47022 3588 37 ENSG00000259956.1 RBM15B chr3 51391268 51397908 + protein_coding KNOWN OTTHUMG00000156896.1 6641 6641 1 ENSG00000145041.14 VPRBP chr3 51395867 51500002 - protein_coding KNOWN OTTHUMG00000156895.4 104136 6849 67 ENSG00000164080.12 RAD54L2 chr3 51541144 51668667 + protein_coding KNOWN OTTHUMG00000152936.5 127524 11924 82 ENSG00000221015.1 RNU6ATAC29P chr3 51611438 51611562 - snRNA KNOWN NA 125 125 1 ENSG00000164081.11 TEX264 chr3 51662693 51704323 + protein_coding KNOWN OTTHUMG00000156901.1 41631 5688 69 ENSG00000201595.1 RNA5SP132 chr3 51694465 51694582 - rRNA KNOWN NA 118 118 1 ENSG00000164082.13 GRM2 chr3 51707070 51718613 + protein_coding KNOWN OTTHUMG00000156902.2 11544 7096 34 ENSG00000278290.1 AC099050.1 chr3 51719610 51719760 + miRNA NOVEL NA 151 151 1 ENSG00000214686.4 IQCF6 chr3 51778561 51779187 - protein_coding KNOWN OTTHUMG00000187148.1 627 446 2 ENSG00000224792.5 IQCF4 chr3 51817603 51819635 + transcribed_processed_pseudogene KNOWN OTTHUMG00000156909.1 2033 1174 12 ENSG00000203325.3 RP11-277A4.4 chr1 32052291 32073474 - antisense NOVEL OTTHUMG00000007683.2 21184 624 3 ENSG00000229972.6 IQCF3 chr3 51817604 51830856 + protein_coding KNOWN OTTHUMG00000156910.2 13253 2102 40 ENSG00000184345.4 IQCF2 chr3 51861629 51863424 + protein_coding KNOWN OTTHUMG00000156914.2 1796 628 6 ENSG00000241789.3 RN7SL504P chr3 51872178 51872464 + misc_RNA KNOWN NA 287 287 1 ENSG00000235455.1 IQCF5-AS1 chr3 51873596 51875767 + antisense NOVEL OTTHUMG00000156912.1 2172 2000 3 ENSG00000214681.3 IQCF5 chr3 51873721 51875584 - protein_coding KNOWN OTTHUMG00000156913.1 1864 512 2 ENSG00000173389.14 IQCF1 chr3 51894876 51903335 - protein_coding KNOWN OTTHUMG00000156908.1 8460 745 9 ENSG00000114767.6 RRP9 chr3 51933430 51941941 - protein_coding KNOWN OTTHUMG00000156930.1 8512 1578 15 ENSG00000041880.13 PARP3 chr3 51942345 51948867 + protein_coding KNOWN OTTHUMG00000156931.4 6523 2928 64 ENSG00000280422.1 RP11-155D18.13 chr3 51951849 51953902 - TEC KNOWN OTTHUMG00000175712.1 2054 2054 1 ENSG00000180929.5 GPR62 chr3 51955314 51957504 + protein_coding KNOWN OTTHUMG00000157367.1 2191 2191 1 ENSG00000127054.17 CPSF3L chr1 1311585 1324691 - protein_coding KNOWN OTTHUMG00000003330.12 13107 8220 412 ENSG00000121775.16 TMEM39B chr1 32072031 32102866 + protein_coding KNOWN OTTHUMG00000004020.8 30836 2820 68 ENSG00000090097.19 PCBP4 chr3 51957454 51968410 - protein_coding KNOWN OTTHUMG00000157366.12 10957 3686 184 ENSG00000272762.4 RP11-155D18.12 chr3 51960301 51974031 - protein_coding NOVEL OTTHUMG00000161549.2 13731 793 11 ENSG00000114779.18 ABHD14B chr3 51968510 51983409 - protein_coding KNOWN OTTHUMG00000157816.3 14900 3161 32 ENSG00000248487.7 ABHD14A chr3 51971426 51981199 + protein_coding KNOWN OTTHUMG00000157818.1 9774 2378 26 ENSG00000114786.14 ABHD14A-ACY1 chr3 51975050 51989183 + protein_coding KNOWN OTTHUMG00000166447.1 14134 2164 47 ENSG00000243989.6 ACY1 chr3 51983340 51989197 + protein_coding KNOWN OTTHUMG00000157815.9 5858 3285 103 ENSG00000162244.9 RPL29 chr3 51993600 51995942 - protein_coding KNOWN OTTHUMG00000155262.3 2343 1912 34 ENSG00000164086.9 DUSP7 chr3 52048919 52056550 - protein_coding KNOWN OTTHUMG00000157819.1 7632 5648 5 ENSG00000164087.6 POC1A chr3 52075253 52154690 - protein_coding KNOWN OTTHUMG00000157817.1 79438 2247 32 ENSG00000242849.2 ALDOAP1 chr3 52193170 52194785 + processed_pseudogene KNOWN OTTHUMG00000157814.2 1616 1078 3 ENSG00000266203.1 MIR5585 chr1 32086949 32087007 + miRNA KNOWN NA 59 59 1 ENSG00000023330.13 ALAS1 chr3 52198086 52214327 + protein_coding KNOWN OTTHUMG00000158108.1 16242 2536 52 ENSG00000280003.1 RP11-330H6.6 chr3 52217016 52219012 - TEC KNOWN OTTHUMG00000175714.1 1997 1997 1 ENSG00000239732.3 TLR9 chr3 52221080 52226163 - protein_coding KNOWN OTTHUMG00000158106.1 5084 3870 2 ENSG00000173366.11 RP11-330H6.5 chr3 52221081 52231190 - protein_coding NOVEL OTTHUMG00000162044.1 10110 3804 8 ENSG00000247596.7 TWF2 chr3 52228610 52239260 - protein_coding KNOWN OTTHUMG00000158105.3 10651 1824 21 ENSG00000243224.1 RP5-1157M23.2 chr3 52239258 52241097 + antisense NOVEL OTTHUMG00000158107.1 1840 1101 4 ENSG00000164088.16 PPM1M chr3 52245793 52250597 + protein_coding KNOWN OTTHUMG00000153046.9 4805 3571 60 ENSG00000164091.10 WDR82 chr3 52254421 52288020 - protein_coding KNOWN OTTHUMG00000150391.2 33600 5726 28 ENSG00000199150.2 MIRLET7G chr3 52268267 52268377 - miRNA KNOWN NA 111 111 1 ENSG00000168237.16 GLYCTK chr3 52287089 52293476 + protein_coding KNOWN OTTHUMG00000158380.1 6388 3013 40 ENSG00000276493.1 Metazoa_SRP chr1 32087523 32087813 - misc_RNA NOVEL NA 291 291 1 ENSG00000242797.3 GLYCTK-AS1 chr3 52288580 52299067 - processed_transcript NOVEL OTTHUMG00000158379.1 10488 1391 8 ENSG00000207926.1 MIR135A1 chr3 52294219 52294308 - miRNA KNOWN NA 90 90 1 ENSG00000114841.16 DNAH1 chr3 52316319 52400491 + protein_coding KNOWN OTTHUMG00000158378.2 84173 13872 230 ENSG00000239557.1 RP11-168J18.6 chr3 52373652 52374882 + processed_pseudogene KNOWN OTTHUMG00000158377.1 1231 1231 1 ENSG00000163930.8 BAP1 chr3 52401013 52410350 - protein_coding KNOWN OTTHUMG00000158392.3 9338 5055 76 ENSG00000010318.18 PHF7 chr3 52410561 52423641 + protein_coding KNOWN OTTHUMG00000158495.2 13081 3463 86 ENSG00000010319.5 SEMA3G chr3 52433053 52445085 - protein_coding KNOWN OTTHUMG00000158570.1 12033 5011 30 ENSG00000114854.6 TNNC1 chr3 52451102 52454070 - protein_coding KNOWN OTTHUMG00000158572.1 2969 1168 12 ENSG00000010322.14 NISCH chr3 52455118 52493071 + protein_coding KNOWN OTTHUMG00000158571.2 37954 9161 123 ENSG00000010327.9 STAB1 chr3 52495338 52524495 + protein_coding KNOWN OTTHUMG00000158574.3 29158 10588 141 ENSG00000025800.12 KPNA6 chr1 32108038 32176568 + protein_coding KNOWN OTTHUMG00000004333.5 68531 7480 46 ENSG00000168268.9 NT5DC2 chr3 52524385 52535054 - protein_coding KNOWN OTTHUMG00000158626.21 10670 4719 108 ENSG00000168273.6 SMIM4 chr3 52534013 52579237 + protein_coding KNOWN OTTHUMG00000158726.2 45225 2482 11 ENSG00000163939.17 PBRM1 chr3 52545352 52685917 - protein_coding KNOWN OTTHUMG00000152663.1 140566 9654 349 ENSG00000252768.1 RNU6-856P chr3 52551846 52551943 - snRNA KNOWN NA 98 98 1 ENSG00000221518.1 RNU6ATAC16P chr3 52560570 52560707 + snRNA KNOWN NA 138 138 1 ENSG00000163938.15 GNL3 chr3 52681156 52694492 + protein_coding KNOWN OTTHUMG00000158752.2 13337 3318 84 ENSG00000280904.1 SNORD19B chr3 52688882 52688961 + snoRNA NOVEL NA 80 80 1 ENSG00000252787.2 SNORD19 chr3 52688890 52688962 + snoRNA NOVEL NA 73 73 1 ENSG00000212493.1 SNORD19 chr3 52689248 52689315 + snoRNA KNOWN NA 68 68 1 ENSG00000238862.1 SNORD19B chr3 52690744 52690827 + snoRNA KNOWN NA 84 84 1 ENSG00000250135.1 RP4-622L5.2 chr1 32170733 32176568 + sense_intronic NOVEL OTTHUMG00000004332.3 5836 667 2 ENSG00000222345.1 SNORD19 chr3 52691378 52691453 + snoRNA NOVEL NA 76 76 1 ENSG00000212452.1 SNORD69 chr3 52692736 52692812 + snoRNA KNOWN NA 77 77 1 ENSG00000016864.15 GLT8D1 chr3 52694485 52706083 - protein_coding KNOWN OTTHUMG00000158759.6 11599 3916 112 ENSG00000114902.12 SPCS1 chr3 52704955 52711146 + protein_coding KNOWN OTTHUMG00000154930.7 6192 5324 22 ENSG00000114904.11 NEK4 chr3 52708449 52770949 - protein_coding KNOWN OTTHUMG00000158836.17 62501 6391 70 ENSG00000275956.1 RP5-966M1.7 chr3 52732547 52733867 + processed_pseudogene KNOWN OTTHUMG00000187559.1 1321 1321 1 ENSG00000270941.1 RP5-966M1.5 chr3 52734735 52735013 + processed_pseudogene KNOWN OTTHUMG00000184328.1 279 279 1 ENSG00000271137.1 RP5-966M1.4 chr3 52753526 52754690 + processed_pseudogene KNOWN OTTHUMG00000184326.1 1165 884 2 ENSG00000055957.9 ITIH1 chr3 52777592 52792068 + protein_coding KNOWN OTTHUMG00000150312.7 14477 4544 108 ENSG00000162267.11 ITIH3 chr3 52794768 52809009 + protein_coding KNOWN OTTHUMG00000158956.6 14242 5921 90 ENSG00000084652.14 TXLNA chr1 32179686 32198285 + protein_coding KNOWN OTTHUMG00000004423.6 18600 5103 21 ENSG00000055955.14 ITIH4 chr3 52812975 52831479 - protein_coding KNOWN OTTHUMG00000159023.2 18505 5462 151 ENSG00000243696.4 RP5-966M1.6 chr3 52813282 52835729 - protein_coding NOVEL OTTHUMG00000186063.3 22448 6315 28 ENSG00000239799.1 ITIH4-AS1 chr3 52823935 52825314 + antisense NOVEL OTTHUMG00000158983.2 1380 395 3 ENSG00000272573.4 MUSTN1 chr3 52833114 52835219 - protein_coding KNOWN OTTHUMG00000159024.5 2106 902 6 ENSG00000248592.6 TMEM110-MUSTN1 chr3 52833121 52897562 - protein_coding KNOWN OTTHUMG00000160756.1 64442 6271 19 ENSG00000213533.10 TMEM110 chr3 52836219 52897596 - protein_coding KNOWN OTTHUMG00000150346.9 61378 5730 22 ENSG00000275789.1 MIR8064 chr3 52846463 52846552 - miRNA KNOWN NA 90 90 1 ENSG00000279144.1 RP11-894J14.2 chr3 52848085 52848553 - TEC KNOWN OTTHUMG00000159046.1 469 469 1 ENSG00000163935.12 SFMBT1 chr3 52903572 53046750 - protein_coding KNOWN OTTHUMG00000159052.13 143179 5676 49 ENSG00000272305.4 RP11-894J14.5 chr3 52969119 53099453 - protein_coding NOVEL OTTHUMG00000185626.1 130335 1760 16 ENSG00000160050.13 CCDC28B chr1 32200386 32205387 + protein_coding KNOWN OTTHUMG00000005738.7 5002 2818 24 ENSG00000280417.1 RP11-5O17.1 chr3 53046166 53048122 + TEC KNOWN OTTHUMG00000159078.1 1957 1957 1 ENSG00000242142.1 SERBP1P3 chr3 53064283 53065091 - processed_pseudogene KNOWN OTTHUMG00000159077.1 809 809 1 ENSG00000163933.8 RFT1 chr3 53088483 53130462 - protein_coding KNOWN OTTHUMG00000074035.4 41980 5488 39 ENSG00000163932.12 PRKCD chr3 53156009 53192717 + protein_coding KNOWN OTTHUMG00000133659.6 36709 3396 56 ENSG00000163931.14 TKT chr3 53224707 53256052 - protein_coding KNOWN OTTHUMG00000158192.2 31346 9507 121 ENSG00000272886.4 DCP1A chr3 53283428 53347610 - protein_coding KNOWN OTTHUMG00000158193.6 64183 6127 41 ENSG00000274967.1 Y_RNA chr3 53290640 53290751 + misc_RNA NOVEL NA 112 112 1 ENSG00000207109.1 SNORD38 chr3 53333060 53333128 - snoRNA NOVEL NA 69 69 1 ENSG00000212608.1 SNORA26 chr3 53387713 53387836 - snoRNA NOVEL NA 124 124 1 ENSG00000227224.1 RP11-72H11.1 chr3 53474700 53475089 - processed_pseudogene KNOWN OTTHUMG00000157294.1 390 390 1 ENSG00000224066.1 RP4-622L5.7 chr1 32204769 32206814 - antisense NOVEL OTTHUMG00000005740.3 2046 1357 6 ENSG00000157388.12 CACNA1D chr3 53494656 53813733 + protein_coding KNOWN OTTHUMG00000158278.2 319078 10657 197 ENSG00000251987.1 SNORD63 chr3 53530322 53530401 - snoRNA NOVEL NA 80 80 1 ENSG00000271916.1 RP11-884K10.6 chr3 53797764 53798019 - antisense NOVEL OTTHUMG00000185632.1 256 256 1 ENSG00000016391.9 CHDH chr3 53812335 53846390 - protein_coding KNOWN OTTHUMG00000158281.2 34056 7758 15 ENSG00000056736.8 IL17RB chr3 53846580 53865800 + protein_coding KNOWN OTTHUMG00000158280.1 19221 3038 31 ENSG00000271976.1 RP11-884K10.7 chr3 53858994 53861576 - antisense NOVEL OTTHUMG00000185633.1 2583 2583 1 ENSG00000113812.12 ACTR8 chr3 53867066 53882202 - protein_coding KNOWN OTTHUMG00000158279.3 15137 4066 44 ENSG00000113811.9 SELK chr3 53884410 53891988 - protein_coding KNOWN OTTHUMG00000158656.1 7579 2165 21 ENSG00000242983.1 CABYRP1 chr3 54047749 54048793 - processed_pseudogene KNOWN OTTHUMG00000158459.1 1045 1045 1 ENSG00000157445.13 CACNA2D3 chr3 54122547 55074557 + protein_coding KNOWN OTTHUMG00000158580.2 952011 4670 284 ENSG00000160051.10 IQCC chr1 32205661 32208687 + protein_coding KNOWN OTTHUMG00000005739.4 3027 2478 14 ENSG00000229806.1 RPS15P5 chr3 54626215 54626646 + processed_pseudogene KNOWN OTTHUMG00000157295.1 432 432 1 ENSG00000265992.1 ESRG chr3 54632122 54639857 - sense_intronic KNOWN OTTHUMG00000179678.1 7736 3140 4 ENSG00000276927.1 AC092057.1 chr3 54639681 54639748 + miRNA NOVEL NA 68 68 1 ENSG00000243715.1 CACNA2D3-AS1 chr3 54874605 54901255 - antisense NOVEL OTTHUMG00000158579.1 26651 2078 7 ENSG00000144771.7 LRTM1 chr3 54918237 54967088 - protein_coding KNOWN OTTHUMG00000158578.1 48852 1584 6 ENSG00000239991.1 RP11-889D3.1 chr3 55166910 55175732 - lincRNA NOVEL OTTHUMG00000158357.1 8823 429 3 ENSG00000243572.1 RP11-889D3.2 chr3 55178172 55189214 + lincRNA NOVEL OTTHUMG00000158362.1 11043 474 3 ENSG00000240708.1 RP11-64C1.1 chr3 55296200 55300738 + lincRNA NOVEL OTTHUMG00000158359.1 4539 1602 2 ENSG00000242568.1 RP11-875H7.1 chr3 55335462 55350915 - lincRNA NOVEL OTTHUMG00000158360.1 15454 587 2 ENSG00000242775.1 RP11-875H7.2 chr3 55360443 55361829 - lincRNA NOVEL OTTHUMG00000158358.1 1387 384 2 ENSG00000222046.2 DCDC2B chr1 32209094 32216196 + protein_coding KNOWN OTTHUMG00000005741.3 7103 1869 16 ENSG00000114251.12 WNT5A chr3 55465715 55490539 - protein_coding KNOWN OTTHUMG00000158361.5 24825 7531 29 ENSG00000244586.1 WNT5A-AS1 chr3 55487699 55488308 + antisense NOVEL OTTHUMG00000158382.1 610 500 2 ENSG00000242317.1 RP11-875H7.5 chr3 55493830 55505261 - lincRNA NOVEL OTTHUMG00000158383.1 11432 563 4 ENSG00000187672.11 ERC2 chr3 55508308 56468363 - protein_coding KNOWN OTTHUMG00000158390.3 960056 7933 94 ENSG00000240777.2 RP11-58O15.1 chr3 55610603 55613104 + lincRNA NOVEL OTTHUMG00000162604.1 2502 553 3 ENSG00000281708.1 ERC2-IT1 chr3 55657206 55659382 - sense_intronic KNOWN OTTHUMG00000189578.1 2177 2177 1 ENSG00000264013.1 MIR3938 chr3 55852492 55852594 - miRNA KNOWN NA 103 103 1 ENSG00000200379.1 RN7SKP45 chr3 56072104 56072407 + misc_RNA KNOWN NA 304 304 1 ENSG00000200238.1 RNA5SP133 chr3 56185104 56185222 + rRNA KNOWN NA 119 119 1 ENSG00000180376.15 CCDC66 chr3 56557161 56621818 + protein_coding KNOWN OTTHUMG00000155748.3 64658 9267 165 ENSG00000274153.1 MIR6727 chr1 1312502 1312566 - miRNA KNOWN NA 65 65 1 ENSG00000160055.18 TMEM234 chr1 32214472 32222359 - protein_coding KNOWN OTTHUMG00000005742.6 7888 3571 68 ENSG00000163946.12 FAM208A chr3 56620133 56683237 - protein_coding KNOWN OTTHUMG00000158827.5 63105 9824 97 ENSG00000163947.10 ARHGEF3 chr3 56727418 57079329 - protein_coding KNOWN OTTHUMG00000158857.8 351912 6594 123 ENSG00000240198.4 ARHGEF3-AS1 chr3 56940040 56960854 + antisense NOVEL OTTHUMG00000158863.2 20815 647 6 ENSG00000186451.1 SPATA12 chr3 57060441 57075432 + protein_coding KNOWN OTTHUMG00000158862.2 14992 2413 2 ENSG00000272202.1 RP11-157F20.3 chr3 57078943 57080101 + antisense NOVEL OTTHUMG00000185634.1 1159 1159 1 ENSG00000144730.15 IL17RD chr3 57089982 57170306 - protein_coding KNOWN OTTHUMG00000150171.3 80325 9561 64 ENSG00000229863.1 RP11-157F20.1 chr3 57134142 57134723 + processed_pseudogene KNOWN OTTHUMG00000157296.1 582 582 1 ENSG00000163666.7 HESX1 chr3 57197843 57226521 - protein_coding KNOWN OTTHUMG00000158597.4 28679 1248 10 ENSG00000157500.9 APPL1 chr3 57227737 57273468 + protein_coding KNOWN OTTHUMG00000133756.10 45732 7033 72 ENSG00000273926.1 AC093928.1 chr3 57233948 57234032 + miRNA NOVEL NA 85 85 1 ENSG00000084623.10 EIF3I chr1 32221928 32231604 + protein_coding KNOWN OTTHUMG00000007364.4 9677 1725 43 ENSG00000239388.7 ASB14 chr3 57268347 57292682 - protein_coding KNOWN OTTHUMG00000158602.2 24336 3232 26 ENSG00000174844.13 DNAH12 chr3 57293699 57544344 - protein_coding KNOWN OTTHUMG00000158598.3 250646 13275 203 ENSG00000212392.1 Y_RNA chr3 57493667 57493780 + misc_RNA NOVEL NA 114 114 1 ENSG00000206918.1 RNU6-1181P chr3 57512450 57512555 + snRNA KNOWN NA 106 106 1 ENSG00000239831.1 RNF7P1 chr3 57519669 57520010 - processed_pseudogene KNOWN OTTHUMG00000158603.1 342 342 1 ENSG00000237186.1 RP11-229A12.2 chr3 57530345 57530967 - processed_pseudogene KNOWN OTTHUMG00000157298.1 623 623 1 ENSG00000202428.1 RNU6-108P chr3 57536252 57536358 - snRNA KNOWN NA 107 107 1 ENSG00000206815.1 RNU6-483P chr3 57548838 57548945 + snRNA KNOWN NA 108 108 1 ENSG00000174840.8 PDE12 chr3 57556276 57566844 + protein_coding KNOWN OTTHUMG00000158599.2 10569 8947 5 ENSG00000168374.9 ARF4 chr3 57571363 57598220 - protein_coding KNOWN OTTHUMG00000158601.4 26858 2595 38 ENSG00000220785.6 MTMR9LP chr1 32231658 32241620 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000007461.5 9963 2961 29 ENSG00000272146.4 RP11-755B10.4 chr3 57597715 57600927 + antisense NOVEL OTTHUMG00000185640.1 3213 597 8 ENSG00000210841.1 RNU6ATAC26P chr3 57619447 57619572 + snRNA KNOWN NA 126 126 1 ENSG00000174839.11 DENND6A chr3 57625457 57693089 - protein_coding KNOWN OTTHUMG00000158639.3 67633 5124 42 ENSG00000239801.1 RP11-755B10.2 chr3 57628810 57654918 + antisense NOVEL OTTHUMG00000158638.1 26109 364 2 ENSG00000241933.1 RP11-755B10.3 chr3 57693205 57696596 + lincRNA NOVEL OTTHUMG00000158637.1 3392 2919 2 ENSG00000163681.13 SLMAP chr3 57755450 57929168 + protein_coding KNOWN OTTHUMG00000133764.2 173719 14147 201 ENSG00000270772.1 RP11-332H21.2 chr3 57800056 57801448 - processed_pseudogene KNOWN OTTHUMG00000184386.1 1393 1070 2 ENSG00000213509.4 PPIAP16 chr3 57941818 57942304 + processed_pseudogene KNOWN OTTHUMG00000158640.1 487 487 1 ENSG00000136068.13 FLNB chr3 58008400 58172251 + protein_coding KNOWN OTTHUMG00000159158.1 163852 13952 271 ENSG00000244161.1 FLNB-AS1 chr3 58162547 58170636 - antisense NOVEL OTTHUMG00000159156.1 8090 3709 4 ENSG00000183615.5 FAM167B chr1 32247233 32248856 + protein_coding KNOWN OTTHUMG00000007462.2 1624 936 2 ENSG00000163687.12 DNASE1L3 chr3 58192257 58214697 - protein_coding KNOWN OTTHUMG00000159153.3 22441 3148 41 ENSG00000163686.12 ABHD6 chr3 58237506 58295693 + protein_coding KNOWN OTTHUMG00000159150.1 58188 3589 50 ENSG00000163684.10 RPP14 chr3 58306247 58324695 + protein_coding KNOWN OTTHUMG00000159152.2 18449 8374 30 ENSG00000255154.6 RPP14 chr3 58306262 58318574 + protein_coding KNOWN OTTHUMG00000166318.4 12313 2119 35 ENSG00000273493.1 RP11-80H18.4 chr3 58329965 58330118 + lincRNA NOVEL OTTHUMG00000186496.1 154 154 1 ENSG00000168297.14 PXK chr3 58332880 58426126 + protein_coding KNOWN OTTHUMG00000159149.3 93247 5354 185 ENSG00000275607.1 RP11-802O23.4 chr3 58379217 58379525 - processed_pseudogene KNOWN OTTHUMG00000187560.1 309 309 1 ENSG00000168291.11 PDHB chr3 58427630 58433857 - protein_coding KNOWN OTTHUMG00000159157.1 6228 4717 78 ENSG00000272182.1 RP11-802O23.3 chr3 58428255 58428815 + antisense NOVEL OTTHUMG00000185735.1 561 561 1 ENSG00000272360.1 RP11-359I18.5 chr3 58490830 58491291 - lincRNA NOVEL OTTHUMG00000185737.1 462 462 1 ENSG00000182866.15 LCK chr1 32251239 32286165 + protein_coding KNOWN OTTHUMG00000007463.5 34927 3339 106 ENSG00000168301.11 KCTD6 chr3 58492114 58502360 + protein_coding KNOWN OTTHUMG00000159161.2 10247 3068 17 ENSG00000168306.11 ACOX2 chr3 58505136 58537319 - protein_coding KNOWN OTTHUMG00000159154.2 32184 3859 76 ENSG00000236722.1 RP11-359I18.1 chr3 58511310 58511676 + processed_pseudogene KNOWN OTTHUMG00000157303.1 367 367 1 ENSG00000168309.15 FAM107A chr3 58564117 58627610 - protein_coding KNOWN OTTHUMG00000159159.1 63494 5321 27 ENSG00000243384.1 RP11-475O23.2 chr3 58572744 58574319 + antisense NOVEL OTTHUMG00000159155.1 1576 350 3 ENSG00000244383.1 RP11-475O23.3 chr3 58607080 58634440 + antisense NOVEL OTTHUMG00000159160.1 27361 821 4 ENSG00000198643.5 FAM3D chr3 58633946 58666848 - protein_coding KNOWN OTTHUMG00000159148.1 32903 1640 39 ENSG00000163689.17 C3orf67 chr3 58717365 59050084 - protein_coding KNOWN OTTHUMG00000159151.3 332720 9455 117 ENSG00000242428.4 C3orf67-AS1 chr3 58824437 59019093 + antisense NOVEL OTTHUMG00000159203.1 194657 2551 12 ENSG00000243295.1 CTD-2185K10.1 chr3 59065150 59119509 + lincRNA NOVEL OTTHUMG00000159199.1 54360 681 2 ENSG00000277617.1 Metazoa_SRP chr1 32269338 32269597 - misc_RNA NOVEL NA 260 260 1 ENSG00000243903.1 RP11-285B24.1 chr3 59380024 59388704 - lincRNA NOVEL OTTHUMG00000159200.1 8681 696 3 ENSG00000242545.1 RP11-719N22.2 chr3 59464330 59510678 - lincRNA NOVEL OTTHUMG00000159201.1 46349 698 2 ENSG00000241804.1 RP11-719N22.1 chr3 59535863 59536415 + processed_pseudogene KNOWN OTTHUMG00000159202.1 553 553 1 ENSG00000277592.1 Metazoa_SRP chr3 59584169 59584445 + misc_RNA NOVEL NA 277 277 1 ENSG00000189283.8 FHIT chr3 59749310 61251459 - protein_coding KNOWN OTTHUMG00000158591.2 1502150 5439 53 ENSG00000240097.1 RP11-641C17.4 chr3 60616822 60618079 + processed_pseudogene KNOWN OTTHUMG00000158652.1 1258 1258 1 ENSG00000281426.1 MIR548BB chr3 60617805 60617870 - miRNA KNOWN NA 66 66 1 ENSG00000232407.3 RP11-641C17.2 chr3 60690225 60690719 - processed_pseudogene KNOWN OTTHUMG00000158654.1 495 495 1 ENSG00000225673.3 RP11-641C17.3 chr3 60730055 60730644 - processed_pseudogene KNOWN OTTHUMG00000158655.1 590 590 1 ENSG00000244183.1 RP11-641C17.1 chr3 60732144 60732636 - processed_pseudogene KNOWN OTTHUMG00000158653.1 493 493 1 ENSG00000252450.1 Y_RNA chr1 32286452 32286561 - misc_RNA NOVEL NA 110 110 1 ENSG00000212211.2 U3 chr3 60856389 60856605 - snoRNA NOVEL NA 217 217 1 ENSG00000144724.17 PTPRG chr3 61561569 62297613 + protein_coding KNOWN OTTHUMG00000158660.1 736045 14633 145 ENSG00000252420.1 Y_RNA chr3 61739127 61739229 - misc_RNA NOVEL NA 103 103 1 ENSG00000226360.5 RPL10AP6 chr3 61742455 61743106 - processed_pseudogene KNOWN OTTHUMG00000157304.1 652 652 1 ENSG00000252184.1 RNU2-10P chr3 62118300 62118510 - snRNA KNOWN NA 211 211 1 ENSG00000237456.3 RP11-154D3.1 chr3 62124204 62124608 - processed_pseudogene KNOWN OTTHUMG00000158659.1 405 405 1 ENSG00000241472.5 PTPRG-AS1 chr3 62260865 62369330 - processed_transcript NOVEL OTTHUMG00000158657.1 108466 4496 45 ENSG00000114405.9 C3orf14 chr3 62318973 62336213 + protein_coding KNOWN OTTHUMG00000158704.1 17241 4430 37 ENSG00000153266.11 FEZF2 chr3 62369681 62374324 - protein_coding KNOWN OTTHUMG00000158705.1 4644 2193 15 ENSG00000163618.16 CADPS chr3 62398346 62875389 - protein_coding KNOWN OTTHUMG00000158651.7 477044 14638 193 ENSG00000116478.10 HDAC1 chr1 32292086 32333635 + protein_coding KNOWN OTTHUMG00000007529.4 41550 3963 63 ENSG00000225662.2 RP11-1036F1.1 chr3 62779176 62779785 - processed_pseudogene KNOWN OTTHUMG00000157307.2 610 610 1 ENSG00000244632.3 RN7SL863P chr3 62796124 62796419 - misc_RNA KNOWN NA 296 296 1 ENSG00000252449.1 RNU6-139P chr3 62814382 62814491 + snRNA KNOWN NA 110 110 1 ENSG00000226082.2 RP11-24H1.1 chr3 62926371 62926882 + processed_pseudogene KNOWN OTTHUMG00000157308.1 512 512 1 ENSG00000244342.4 LINC00698 chr3 62950430 63125062 + lincRNA NOVEL OTTHUMG00000158701.1 174633 2745 30 ENSG00000242841.1 KRT8P35 chr3 63096374 63097711 - processed_pseudogene KNOWN OTTHUMG00000158702.1 1338 1338 1 ENSG00000240359.1 UBL5P3 chr3 63203218 63203448 - processed_pseudogene KNOWN OTTHUMG00000158703.1 231 231 1 ENSG00000163630.9 SYNPR chr3 63228315 63616921 + protein_coding KNOWN OTTHUMG00000158699.1 388607 4224 71 ENSG00000252662.1 AC099545.1 chr3 63334787 63334867 + miRNA NOVEL NA 81 81 1 ENSG00000241359.1 SYNPR-AS1 chr3 63423596 63550051 - antisense NOVEL OTTHUMG00000158700.1 126456 558 5 ENSG00000175130.6 MARCKSL1 chr1 32333832 32336379 - protein_coding KNOWN OTTHUMG00000007589.3 2548 1699 2 ENSG00000252301.1 RNA5SP134 chr3 63545440 63545535 + rRNA KNOWN NA 96 96 1 ENSG00000188817.6 SNTN chr3 63652668 63679020 + protein_coding KNOWN OTTHUMG00000158766.1 26353 4651 13 ENSG00000224479.4 AC136289.1 chr3 63742293 63827445 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155878.2 85153 3067 25 ENSG00000281666.1 AC104162.1 chr3 63791535 63791656 + miRNA NOVEL NA 122 122 1 ENSG00000163632.11 C3orf49 chr3 63819362 63848636 + protein_coding KNOWN OTTHUMG00000158761.1 29275 1581 18 ENSG00000163634.10 THOC7 chr3 63833870 63863903 - protein_coding KNOWN OTTHUMG00000158767.2 30034 1784 41 ENSG00000240549.2 THOC7-AS1 chr3 63860645 63861819 + antisense NOVEL OTTHUMG00000158760.2 1175 673 2 ENSG00000163635.16 ATXN7 chr3 63864557 64003462 + protein_coding KNOWN OTTHUMG00000158763.3 138906 9172 81 ENSG00000280620.1 SCAANT1 chr3 63911518 63911772 - antisense KNOWN OTTHUMG00000189735.1 255 255 1 ENSG00000239653.1 PSMD6-AS2 chr3 64004022 64012148 + antisense NOVEL OTTHUMG00000158764.1 8127 2456 3 ENSG00000233775.1 RP4-811H24.9 chr1 32349194 32350663 - lincRNA NOVEL OTTHUMG00000007633.4 1470 687 2 ENSG00000271843.1 RP11-245J9.5 chr3 64008082 64008692 - lincRNA NOVEL OTTHUMG00000185740.1 611 611 1 ENSG00000163636.9 PSMD6 chr3 64010549 64024010 - protein_coding KNOWN OTTHUMG00000158765.1 13462 9123 67 ENSG00000243410.1 RP11-245J9.4 chr3 64011964 64016246 + antisense NOVEL OTTHUMG00000158762.1 4283 441 2 ENSG00000272181.1 RP11-245J9.6 chr3 64019508 64019925 + antisense NOVEL OTTHUMG00000185741.1 418 418 1 ENSG00000241111.1 PRICKLE2-AS1 chr3 64067964 64103131 + antisense NOVEL OTTHUMG00000158788.1 35168 6505 3 ENSG00000200222.2 U3 chr3 64071807 64072019 - snoRNA NOVEL NA 213 213 1 ENSG00000189196.4 LINC00994 chr3 64078361 64087363 - lincRNA NOVEL OTTHUMG00000158790.1 9003 2129 4 ENSG00000163637.10 PRICKLE2 chr3 64093867 64445476 - protein_coding KNOWN OTTHUMG00000158789.3 351610 8726 25 ENSG00000241572.1 PRICKLE2-AS1 chr3 64099273 64101122 + antisense NOVEL OTTHUMG00000158793.1 1850 709 4 ENSG00000241101.1 PRICKLE2-AS2 chr3 64103470 64106056 + antisense NOVEL OTTHUMG00000158792.1 2587 496 4 ENSG00000240731.1 RP5-890O3.9 chr1 1317581 1318689 - sense_intronic NOVEL OTTHUMG00000003331.1 1109 386 2 ENSG00000162526.6 TSSK3 chr1 32351521 32364312 + protein_coding KNOWN OTTHUMG00000007585.2 12792 2191 9 ENSG00000239926.1 PRDX3P4 chr3 64174401 64175147 + processed_pseudogene KNOWN OTTHUMG00000158794.1 747 747 1 ENSG00000226017.2 PRICKLE2-AS3 chr3 64187544 64200965 + antisense NOVEL OTTHUMG00000158795.1 13422 2496 4 ENSG00000243993.1 RP11-14D22.2 chr3 64444482 64445476 - lincRNA NOVEL OTTHUMG00000158710.1 995 341 2 ENSG00000244564.1 RP11-14D22.1 chr3 64445231 64454832 + lincRNA NOVEL OTTHUMG00000158709.1 9602 565 4 ENSG00000212340.1 RNU6-739P chr3 64511755 64511857 + snRNA KNOWN NA 103 103 1 ENSG00000163638.12 ADAMTS9 chr3 64515654 64688000 - protein_coding KNOWN OTTHUMG00000158722.2 172347 10680 173 ENSG00000241158.4 ADAMTS9-AS1 chr3 64561322 64592757 + antisense NOVEL OTTHUMG00000158723.4 31436 6949 52 ENSG00000241684.4 ADAMTS9-AS2 chr3 64684909 65011468 + antisense NOVEL OTTHUMG00000158725.2 326560 7232 16 ENSG00000243149.1 RP11-543A18.1 chr3 65174958 65193499 + lincRNA NOVEL OTTHUMG00000158734.1 18542 556 4 ENSG00000264871.1 AC104331.1 chr3 65232900 65232983 - miRNA NOVEL NA 84 84 1 ENSG00000225828.1 FAM229A chr1 32361270 32364278 - protein_coding KNOWN OTTHUMG00000007587.6 3009 2845 10 ENSG00000151276.22 MAGI1 chr3 65353525 66038834 - protein_coding KNOWN OTTHUMG00000157554.4 685310 11649 254 ENSG00000270059.1 RP11-88H12.2 chr3 65359268 65359717 - sense_intronic NOVEL OTTHUMG00000184087.1 450 450 1 ENSG00000244226.1 ILF2P1 chr3 65687301 65688468 + processed_pseudogene KNOWN OTTHUMG00000158735.1 1168 1168 1 ENSG00000223409.1 RPL17P17 chr3 65843890 65844446 + processed_pseudogene KNOWN OTTHUMG00000157309.1 557 557 1 ENSG00000272610.1 MAGI1-IT1 chr3 65872815 65954558 - sense_intronic KNOWN OTTHUMG00000186069.1 81744 2567 3 ENSG00000240175.1 MAGI1-AS1 chr3 65893816 65925297 + antisense KNOWN OTTHUMG00000158733.1 31482 591 3 ENSG00000274622.2 AC106827.1 chr3 65941247 65941347 + miRNA NOVEL NA 101 101 1 ENSG00000202071.1 Y_RNA chr3 66003839 66003940 - misc_RNA NOVEL NA 102 102 1 ENSG00000203647.2 RP11-320P11.1 chr3 66008770 66009200 - processed_pseudogene KNOWN OTTHUMG00000186576.1 431 431 1 ENSG00000144741.16 SLC25A26 chr3 66133610 66388116 + protein_coding KNOWN OTTHUMG00000149917.6 254507 5850 57 ENSG00000160058.17 BSDC1 chr1 32365103 32394731 - protein_coding KNOWN OTTHUMG00000007588.6 29629 6271 112 ENSG00000206759.1 RNU6-787P chr3 66293114 66293220 - snRNA KNOWN NA 107 107 1 ENSG00000241587.3 RN7SL482P chr3 66323855 66324152 + misc_RNA KNOWN NA 298 298 1 ENSG00000144749.12 LRIG1 chr3 66378797 66501263 - protein_coding KNOWN OTTHUMG00000158727.1 122467 7032 83 ENSG00000277939.1 AC099665.1 chr3 66571603 66571690 - miRNA NOVEL NA 88 88 1 ENSG00000271174.1 RP11-814M22.2 chr3 66622760 66623102 - processed_pseudogene KNOWN OTTHUMG00000184385.1 343 343 1 ENSG00000214560.4 RPL21P41 chr3 66637149 66637412 + processed_pseudogene KNOWN OTTHUMG00000157313.1 264 264 1 ENSG00000163376.10 KBTBD8 chr3 66998307 67011210 + protein_coding KNOWN OTTHUMG00000158779.1 12904 4736 13 ENSG00000241884.2 RP11-85I21.1 chr3 67296300 67306359 + lincRNA NOVEL OTTHUMG00000158741.2 10060 2110 4 ENSG00000172340.13 SUCLG2 chr3 67360460 67654614 - protein_coding KNOWN OTTHUMG00000158740.1 294155 3090 37 ENSG00000242510.1 NDUFB4P1 chr3 67513940 67514320 + processed_pseudogene KNOWN OTTHUMG00000158738.1 381 381 1 ENSG00000224333.1 GAPDHP20 chr1 32402109 32403115 - processed_pseudogene KNOWN OTTHUMG00000007747.1 1007 1007 1 ENSG00000241316.5 SUCLG2-AS1 chr3 67654697 67947713 + lincRNA NOVEL OTTHUMG00000158739.2 293017 3032 17 ENSG00000266400.1 AC113171.1 chr3 67828172 67828273 + miRNA NOVEL NA 102 102 1 ENSG00000183662.9 FAM19A1 chr3 68004216 68545625 + protein_coding KNOWN OTTHUMG00000158745.1 541410 2933 16 ENSG00000214552.4 COPS8P2 chr3 68145004 68145630 + processed_pseudogene KNOWN OTTHUMG00000158747.1 627 627 1 ENSG00000240568.1 RP11-1008M1.1 chr3 68192398 68192580 + processed_pseudogene KNOWN OTTHUMG00000158746.1 183 183 1 ENSG00000244640.1 RP11-436J20.1 chr3 68633706 68634356 - processed_pseudogene KNOWN OTTHUMG00000157314.1 651 651 1 ENSG00000212095.1 AC096922.1 chr3 68634916 68635009 + miRNA NOVEL NA 94 94 1 ENSG00000241506.1 PSMC1P1 chr3 68635705 68637024 + processed_pseudogene KNOWN OTTHUMG00000158743.1 1320 1320 1 ENSG00000275845.1 AC096922.2 chr3 68688480 68688588 + miRNA NOVEL NA 109 109 1 ENSG00000163377.13 FAM19A4 chr3 68731766 68932610 - protein_coding KNOWN OTTHUMG00000158744.1 200845 2292 10 ENSG00000270850.1 RP11-395N6.4 chr1 32421979 32422319 + processed_pseudogene KNOWN OTTHUMG00000184276.1 341 341 1 ENSG00000252828.1 RNA5SP135 chr3 68882967 68883091 + rRNA KNOWN NA 125 125 1 ENSG00000163378.12 EOGT chr3 68975214 69013961 - protein_coding KNOWN OTTHUMG00000156279.2 38748 5645 100 ENSG00000244513.5 CTD-2013N24.2 chr3 69013941 69056622 + antisense NOVEL OTTHUMG00000158770.3 42682 3746 36 ENSG00000144747.13 TMF1 chr3 69019827 69052303 - protein_coding KNOWN OTTHUMG00000158771.1 32477 6999 57 ENSG00000265355.1 MIR3136 chr3 69048958 69049035 - miRNA KNOWN NA 78 78 1 ENSG00000144744.15 UBA3 chr3 69054730 69080408 - protein_coding KNOWN OTTHUMG00000154325.3 25679 4106 109 ENSG00000144746.6 ARL6IP5 chr3 69084944 69106066 + protein_coding KNOWN OTTHUMG00000158773.1 21123 2522 15 ENSG00000163380.14 LMOD3 chr3 69106872 69123032 - protein_coding KNOWN OTTHUMG00000158774.1 16161 4276 11 ENSG00000114541.13 FRMD4B chr3 69169990 69542583 - protein_coding KNOWN OTTHUMG00000158772.3 372594 9993 124 ENSG00000239263.1 RBM43P1 chr3 69471452 69472532 - processed_pseudogene KNOWN OTTHUMG00000158769.1 1081 1081 1 ENSG00000229259.1 LRRC37A12P chr1 32423214 32426789 - unprocessed_pseudogene KNOWN OTTHUMG00000038009.1 3576 1801 4 ENSG00000240265.1 RP11-62G11.1 chr3 69535664 69536693 - processed_pseudogene KNOWN OTTHUMG00000158768.1 1030 1030 1 ENSG00000240842.1 RP11-62G11.2 chr3 69564106 69571122 - lincRNA NOVEL OTTHUMG00000159016.1 7017 455 3 ENSG00000241667.1 RP11-444P10.1 chr3 69591341 69593121 + lincRNA NOVEL OTTHUMG00000159018.1 1781 749 2 ENSG00000187098.13 MITF chr3 69739435 69968337 + protein_coding KNOWN OTTHUMG00000149921.12 228903 7193 119 ENSG00000241665.3 RN7SL418P chr3 69769487 69769773 - misc_RNA KNOWN NA 287 287 1 ENSG00000265722.1 AC099326.1 chr3 69920125 69920210 + miRNA NOVEL NA 86 86 1 ENSG00000240405.4 LINC01212 chr3 69999577 70015318 + lincRNA NOVEL OTTHUMG00000159017.1 15742 2088 8 ENSG00000271034.1 RP11-963H1.1 chr3 70125070 70126609 - processed_pseudogene KNOWN OTTHUMG00000184384.1 1540 1540 1 ENSG00000242728.1 UQCRHP4 chr3 70140217 70140488 + processed_pseudogene KNOWN OTTHUMG00000158799.1 272 272 1 ENSG00000242120.3 RP11-231I13.2 chr3 70196894 70312726 - antisense NOVEL OTTHUMG00000158801.2 115833 778 4 ENSG00000263529.2 RN7SL122P chr1 32457835 32458135 + misc_RNA KNOWN NA 301 301 1 ENSG00000222615.1 AC134025.1 chr3 70251643 70251745 - miRNA NOVEL NA 103 103 1 ENSG00000240156.1 COX6CP6 chr3 70751123 70751350 + processed_pseudogene KNOWN OTTHUMG00000158802.1 228 228 1 ENSG00000243873.1 HMGB1P36 chr3 70753854 70754573 + processed_pseudogene KNOWN OTTHUMG00000158798.1 720 576 2 ENSG00000206939.1 RNU6-281P chr3 70808350 70808452 + snRNA KNOWN NA 103 103 1 ENSG00000221382.1 AC096971.1 chr3 70878660 70878792 - miRNA NOVEL NA 133 133 1 ENSG00000114861.17 FOXP1 chr3 70954693 71583989 - protein_coding KNOWN OTTHUMG00000158803.5 629297 13628 246 ENSG00000277539.1 RP11-298C2.1 chr3 71276087 71289616 - sense_intronic NOVEL OTTHUMG00000188140.1 13530 449 3 ENSG00000244203.2 FOXP1-AS1 chr3 71289769 71305853 + antisense NOVEL OTTHUMG00000158800.2 16085 700 5 ENSG00000221264.1 MIR1284 chr3 71541970 71542089 - miRNA KNOWN NA 120 120 1 ENSG00000274387.1 RP11-154H23.5 chr3 71567863 71571112 + antisense NOVEL OTTHUMG00000188143.1 3250 604 2 ENSG00000254553.1 RP1-27O5.3 chr1 32465057 32600792 + protein_coding NOVEL OTTHUMG00000167086.2 135736 3447 10 ENSG00000242094.1 FOXP1-IT1 chr3 71570255 71574457 - sense_intronic NOVEL OTTHUMG00000158796.1 4203 3539 2 ENSG00000277855.1 RP11-154H23.4 chr3 71581721 71628558 + antisense NOVEL OTTHUMG00000188144.1 46838 820 3 ENSG00000270562.1 RP11-154H23.3 chr3 71584943 71587409 + lincRNA NOVEL OTTHUMG00000175716.2 2467 2467 1 ENSG00000163412.11 EIF4E3 chr3 71675416 71754773 - protein_coding KNOWN OTTHUMG00000158797.7 79358 10779 66 ENSG00000170837.2 GPR27 chr3 71754050 71756496 + protein_coding KNOWN OTTHUMG00000158810.1 2447 2447 1 ENSG00000163421.7 PROK2 chr3 71771656 71785206 - protein_coding KNOWN OTTHUMG00000158809.1 13551 1612 7 ENSG00000239250.3 RN7SL271P chr3 71827177 71827471 + misc_RNA KNOWN NA 295 295 1 ENSG00000244130.1 UBE2Q2P9 chr3 72006774 72006975 + processed_pseudogene KNOWN OTTHUMG00000158787.2 202 202 1 ENSG00000274043.1 AC105265.1 chr3 72023537 72023604 - miRNA NOVEL NA 68 68 1 ENSG00000241163.6 LINC00877 chr3 72035300 72279503 - lincRNA NOVEL OTTHUMG00000158784.4 244204 4878 36 ENSG00000273274.1 ZBTB8B chr1 32465069 32496686 + protein_coding KNOWN OTTHUMG00000167087.2 31618 12834 4 ENSG00000273461.4 RP11-398A8.4 chr3 72061061 72069933 + lincRNA NOVEL OTTHUMG00000186307.1 8873 496 8 ENSG00000276471.1 RP11-398A8.5 chr3 72080564 72084641 - lincRNA NOVEL OTTHUMG00000188113.1 4078 306 2 ENSG00000239350.1 RP11-398A8.2 chr3 72085089 72085287 + processed_pseudogene KNOWN OTTHUMG00000158785.1 199 199 1 ENSG00000242609.1 RP11-398A8.1 chr3 72086888 72087725 + processed_pseudogene KNOWN OTTHUMG00000158786.1 838 838 1 ENSG00000243083.4 LINC00870 chr3 72151257 72174332 + lincRNA NOVEL OTTHUMG00000159724.1 23076 2933 9 ENSG00000272774.1 RP11-433A10.3 chr3 72178279 72178810 + lincRNA NOVEL OTTHUMG00000185834.1 532 532 1 ENSG00000242618.1 RP11-433A10.2 chr3 72202944 72209892 - lincRNA NOVEL OTTHUMG00000159723.1 6949 947 3 ENSG00000212070.1 AC112219.1 chr3 72262322 72262428 - miRNA NOVEL NA 107 107 1 ENSG00000260670.1 RP11-447M4.1 chr3 72321051 72324027 - lincRNA NOVEL OTTHUMG00000175719.1 2977 2977 1 ENSG00000163602.9 RYBP chr3 72371825 72446918 - protein_coding KNOWN OTTHUMG00000159190.3 75094 7512 4 ENSG00000160062.13 ZBTB8A chr1 32539427 32605939 + protein_coding KNOWN OTTHUMG00000007855.6 66513 7075 10 ENSG00000244345.1 RP11-654C22.2 chr3 72504806 72550552 - lincRNA KNOWN OTTHUMG00000159191.1 45747 866 3 ENSG00000199469.1 RNU1-62P chr3 72576691 72576854 + snRNA KNOWN NA 164 164 1 ENSG00000239568.1 RP11-654C22.1 chr3 72583370 72583535 + processed_pseudogene KNOWN OTTHUMG00000158824.1 166 166 1 ENSG00000222838.1 RNA5SP136 chr3 72691705 72691811 - rRNA KNOWN NA 107 107 1 ENSG00000144736.12 SHQ1 chr3 72749277 72861914 - protein_coding KNOWN OTTHUMG00000158814.2 112638 5841 51 ENSG00000241537.1 RP11-624D20.1 chr3 72772539 72773471 + processed_pseudogene KNOWN OTTHUMG00000158782.1 933 933 1 ENSG00000240135.1 PSMD12P chr3 72876737 72878102 - unprocessed_pseudogene KNOWN OTTHUMG00000158817.1 1366 1366 1 ENSG00000271266.1 RP11-728B21.3 chr3 72884234 72884679 + processed_pseudogene KNOWN OTTHUMG00000184321.1 446 446 1 ENSG00000172986.11 GXYLT2 chr3 72888073 72998138 + protein_coding KNOWN OTTHUMG00000158815.1 110066 3667 14 ENSG00000276890.1 Metazoa_SRP chr3 72926955 72927237 - misc_RNA NOVEL NA 283 283 1 ENSG00000224051.5 CPTP chr1 1324756 1328897 + protein_coding KNOWN OTTHUMG00000003171.2 4142 2556 8 ENSG00000176261.14 ZBTB8OS chr1 32600172 32650903 - protein_coding KNOWN OTTHUMG00000007856.9 50732 3531 76 ENSG00000242960.1 FTH1P23 chr3 72929044 72929593 + processed_pseudogene KNOWN OTTHUMG00000158783.1 550 550 1 ENSG00000163605.13 PPP4R2 chr3 72996785 73069199 + protein_coding KNOWN OTTHUMG00000158816.2 72415 5964 38 ENSG00000238959.1 RNU7-19P chr3 73027808 73027873 + snRNA KNOWN NA 66 66 1 ENSG00000255423.1 EBLN2 chr3 73061659 73063337 + protein_coding KNOWN OTTHUMG00000165897.1 1679 1679 1 ENSG00000252651.1 RNU6-557P chr3 73092148 73092257 - snRNA KNOWN NA 110 110 1 ENSG00000223247.1 RNU2-64P chr3 73110992 73111182 + snRNA KNOWN NA 191 191 1 ENSG00000182921.9 CCDC75P1 chr3 73182501 73183291 - processed_pseudogene KNOWN OTTHUMG00000158866.1 791 791 1 ENSG00000252937.1 RNU6-1270P chr3 73241789 73241896 - snRNA KNOWN NA 108 108 1 ENSG00000121440.13 PDZRN3 chr3 73382433 73624940 - protein_coding KNOWN OTTHUMG00000158865.4 242508 6136 74 ENSG00000239119.1 RNU7-119P chr3 73593940 73594002 - snRNA KNOWN NA 63 63 1 ENSG00000200591.1 Y_RNA chr1 32639951 32640052 + misc_RNA NOVEL NA 102 102 1 ENSG00000239677.5 PDZRN3-AS1 chr3 73621713 73626796 + antisense NOVEL OTTHUMG00000158864.5 5084 1598 13 ENSG00000278934.1 CTD-2006M22.2 chr3 73624410 73627626 + TEC KNOWN OTTHUMG00000182479.1 3217 3217 1 ENSG00000242364.1 RP11-451J24.1 chr3 73648399 73648807 - processed_pseudogene KNOWN OTTHUMG00000158837.1 409 409 1 ENSG00000242741.1 RP11-20B7.1 chr3 73808601 73902866 + lincRNA NOVEL OTTHUMG00000158832.2 94266 782 4 ENSG00000278554.1 Metazoa_SRP chr3 73959642 73959927 - misc_RNA NOVEL NA 286 286 1 ENSG00000239454.1 RP11-508O18.1 chr3 73999805 74005609 + lincRNA NOVEL OTTHUMG00000158838.1 5805 1371 2 ENSG00000223738.3 RP11-781E19.1 chr3 74101349 74103553 + processed_pseudogene KNOWN OTTHUMG00000158812.1 2205 2205 1 ENSG00000213452.4 AKR1B1P2 chr3 74135959 74136892 + processed_pseudogene KNOWN OTTHUMG00000158811.1 934 934 1 ENSG00000113805.8 CNTN3 chr3 74262568 74521140 - protein_coding KNOWN OTTHUMG00000158813.1 258573 5109 25 ENSG00000263689.1 AC128653.1 chr3 74534783 74534871 - miRNA NOVEL NA 89 89 1 ENSG00000162521.17 RBBP4 chr1 32651142 32686211 + protein_coding KNOWN OTTHUMG00000007998.12 35070 9470 127 ENSG00000241022.1 NIPA2P2 chr3 75084155 75085237 + processed_pseudogene KNOWN OTTHUMG00000158821.1 1083 1083 1 ENSG00000242638.3 RN7SL294P chr3 75182754 75183048 - misc_RNA KNOWN NA 295 295 1 ENSG00000266780.1 MIR4444-2 chr3 75214476 75214549 + miRNA KNOWN NA 74 74 1 ENSG00000213300.5 HNRNPA3P6 chr3 75214631 75215636 + processed_pseudogene KNOWN OTTHUMG00000158819.1 1006 1006 1 ENSG00000228868.3 MYLKP1 chr3 75328549 75339071 - unprocessed_pseudogene KNOWN OTTHUMG00000158822.1 10523 1580 5 ENSG00000263782.1 AC117481.1 chr3 75346139 75346215 - miRNA NOVEL NA 77 77 1 ENSG00000243674.1 OR7E66P chr3 75347833 75348787 - unprocessed_pseudogene KNOWN OTTHUMG00000158820.1 955 955 1 ENSG00000179799.8 OR7E22P chr3 75356516 75357503 - unprocessed_pseudogene KNOWN OTTHUMG00000158823.1 988 988 1 ENSG00000266685.1 AC139453.1 chr3 75369259 75369346 - miRNA NOVEL NA 88 88 1 ENSG00000230655.3 OR7E55P chr3 75370448 75371342 - unprocessed_pseudogene KNOWN OTTHUMG00000158818.1 895 895 1 ENSG00000162520.13 SYNC chr1 32680360 32703596 - protein_coding KNOWN OTTHUMG00000008087.4 23237 3487 13 ENSG00000244699.1 RP11-803B1.2 chr3 75384059 75391810 - unprocessed_pseudogene KNOWN OTTHUMG00000158856.1 7752 369 3 ENSG00000240665.1 LSP1P2 chr3 75395188 75395320 + processed_pseudogene KNOWN OTTHUMG00000158854.1 133 133 1 ENSG00000242953.1 RP11-803B1.3 chr3 75395404 75395536 - processed_pseudogene KNOWN OTTHUMG00000158850.1 133 133 1 ENSG00000238278.3 ALG1L6P chr3 75415070 75422143 + unprocessed_pseudogene KNOWN OTTHUMG00000158851.1 7074 758 8 ENSG00000244026.5 FAM86DP chr3 75421552 75435110 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000158855.2 13559 3626 43 ENSG00000272690.4 RP11-803B1.8 chr3 75435348 75457486 + lincRNA NOVEL OTTHUMG00000185852.1 22139 1862 8 ENSG00000239959.1 ENPP7P2 chr3 75446769 75491202 - unprocessed_pseudogene KNOWN OTTHUMG00000158849.1 44434 943 3 ENSG00000243794.1 SNRPCP10 chr3 75521803 75522012 + processed_pseudogene KNOWN OTTHUMG00000158853.1 210 210 1 ENSG00000272710.1 CTD-2026G6.3 chr3 75540049 75579999 - lincRNA NOVEL OTTHUMG00000185853.1 39951 201 2 ENSG00000244674.1 RPS3AP15 chr3 75542149 75542929 - processed_pseudogene KNOWN OTTHUMG00000157316.1 781 781 1 ENSG00000224409.1 RP11-114B7.6 chr1 32717734 32725237 - antisense NOVEL OTTHUMG00000041501.1 7504 395 2 ENSG00000221602.1 AC133041.1 chr3 75549797 75549945 + miRNA NOVEL NA 149 149 1 ENSG00000239383.1 RP11-413E6.2 chr3 75590298 75590649 - processed_pseudogene KNOWN OTTHUMG00000158848.1 352 352 1 ENSG00000244222.2 OR7E121P chr3 75598652 75599673 - unprocessed_pseudogene KNOWN OTTHUMG00000158852.2 1022 1022 1 ENSG00000172971.7 UNC93B3 chr3 75619506 75623849 - unprocessed_pseudogene KNOWN OTTHUMG00000158960.1 4344 687 3 ENSG00000243422.1 RP11-413E6.1 chr3 75624686 75625153 - processed_pseudogene KNOWN OTTHUMG00000157322.1 468 468 1 ENSG00000221795.1 MIR1324 chr3 75630763 75630858 + miRNA KNOWN NA 96 96 1 ENSG00000241532.1 AGGF1P3 chr3 75653561 75654773 - processed_pseudogene KNOWN OTTHUMG00000158959.1 1213 1213 1 ENSG00000241622.1 RARRES2P1 chr3 75658534 75659014 + processed_pseudogene KNOWN OTTHUMG00000158964.1 481 481 1 ENSG00000172969.6 FRG2C chr3 75664330 75667220 + protein_coding KNOWN OTTHUMG00000158963.1 2891 2078 8 ENSG00000236138.4 DUX4L26 chr3 75668931 75670185 + processed_pseudogene KNOWN OTTHUMG00000158962.2 1255 1255 1 ENSG00000162522.9 KIAA1522 chr1 32741885 32774970 + protein_coding KNOWN OTTHUMG00000008088.6 33086 5965 30 ENSG00000242516.1 LINC00960 chr3 75672391 75679303 + lincRNA NOVEL OTTHUMG00000158961.1 6913 3181 8 ENSG00000227124.7 ZNF717 chr3 75709643 75785583 - protein_coding KNOWN OTTHUMG00000158965.4 75941 6871 26 ENSG00000265592.2 RN7SL92P chr3 75713012 75713314 - misc_RNA KNOWN NA 303 303 1 ENSG00000266396.1 MIR4273 chr3 75738280 75738363 + miRNA KNOWN NA 84 84 1 ENSG00000185008.16 ROBO2 chr3 75906695 77649964 + protein_coding KNOWN OTTHUMG00000158935.8 1743270 16663 181 ENSG00000222883.1 Y_RNA chr3 75964980 75965069 - misc_RNA NOVEL NA 90 90 1 ENSG00000252504.3 AC067717.1 chr3 76234402 76234489 - miRNA NOVEL NA 88 88 1 ENSG00000212104.1 AC026877.1 chr3 76417896 76417980 - miRNA NOVEL NA 85 85 1 ENSG00000240809.1 RP11-550F7.1 chr3 76434018 76435428 + processed_pseudogene KNOWN OTTHUMG00000158861.1 1411 1411 1 ENSG00000199520.1 RNU6-386P chr3 77092057 77092163 + snRNA KNOWN NA 107 107 1 ENSG00000134684.9 YARS chr1 32775237 32818153 - protein_coding KNOWN OTTHUMG00000003933.2 42917 8212 60 ENSG00000213450.4 VDAC1P7 chr3 77316752 77317598 - processed_pseudogene KNOWN OTTHUMG00000158867.1 847 847 1 ENSG00000206891.1 RNU6-217P chr3 77811741 77811844 - snRNA KNOWN NA 104 104 1 ENSG00000264841.1 AC134729.1 chr3 77926705 77926786 - miRNA NOVEL NA 82 82 1 ENSG00000244461.1 RP11-354H21.1 chr3 78038705 78046794 - lincRNA NOVEL OTTHUMG00000158840.1 8090 409 3 ENSG00000240573.1 RP11-354H21.2 chr3 78087404 78092270 + lincRNA NOVEL OTTHUMG00000158839.1 4867 554 3 ENSG00000243957.3 RN7SL647P chr3 78115158 78115457 + misc_RNA KNOWN NA 300 300 1 ENSG00000222574.1 RN7SKP61 chr3 78161698 78161992 + misc_RNA KNOWN NA 295 295 1 ENSG00000240241.4 RP11-314M24.1 chr3 78266940 78294731 + lincRNA NOVEL OTTHUMG00000158945.1 27792 1047 10 ENSG00000239226.1 MRPS17P3 chr3 78525101 78525485 + processed_pseudogene KNOWN OTTHUMG00000158844.1 385 385 1 ENSG00000169855.18 ROBO1 chr3 78597240 79767815 - protein_coding KNOWN OTTHUMG00000158843.3 1170576 10875 222 ENSG00000116497.16 S100PBP chr1 32816767 32858879 + protein_coding KNOWN OTTHUMG00000003955.6 42113 9194 61 ENSG00000240752.1 RP11-588D3.1 chr3 78758974 78759374 + processed_pseudogene KNOWN OTTHUMG00000157326.1 401 401 1 ENSG00000240964.3 RN7SL751P chr3 78938009 78938292 - misc_RNA KNOWN NA 284 284 1 ENSG00000265193.1 MIR3923 chr3 79507887 79507969 + miRNA KNOWN NA 83 83 1 ENSG00000216116.1 AC117479.1 chr3 79584592 79584684 - miRNA NOVEL NA 93 93 1 ENSG00000243877.1 HMGB1P38 chr3 79957566 79958142 - processed_pseudogene KNOWN OTTHUMG00000158930.1 577 577 1 ENSG00000271389.1 OSBPL9P1 chr3 80163327 80164795 + processed_pseudogene KNOWN OTTHUMG00000158929.2 1469 1469 1 ENSG00000239699.1 HNRNPA3P8 chr3 80216261 80217234 + processed_pseudogene KNOWN OTTHUMG00000158931.1 974 974 1 ENSG00000242586.1 RP11-481N16.1 chr3 80442081 80442305 + unprocessed_pseudogene KNOWN OTTHUMG00000158936.1 225 225 1 ENSG00000242828.1 RP11-47P18.1 chr3 80761042 80788963 - lincRNA NOVEL OTTHUMG00000158943.1 27922 403 3 ENSG00000242781.1 RP11-47P18.2 chr3 80764897 80789354 + lincRNA NOVEL OTTHUMG00000158944.1 24458 712 5 ENSG00000160097.14 FNDC5 chr1 32862268 32872482 - protein_coding KNOWN OTTHUMG00000004015.3 10215 3139 19 ENSG00000266025.2 AC128715.1 chr3 80871198 80871266 + miRNA NOVEL NA 69 69 1 ENSG00000243694.2 RP11-6B4.1 chr3 80993868 81095647 + lincRNA NOVEL OTTHUMG00000158949.1 101780 596 2 ENSG00000242145.1 RP11-520D19.1 chr3 81208193 81208914 - lincRNA NOVEL OTTHUMG00000158948.1 722 553 2 ENSG00000241593.4 RP11-520D19.2 chr3 81246579 81297345 - lincRNA NOVEL OTTHUMG00000158980.1 50767 1261 9 ENSG00000244281.1 RP11-564P9.1 chr3 81366990 81368021 - processed_pseudogene KNOWN OTTHUMG00000158979.1 1032 1032 1 ENSG00000114480.11 GBE1 chr3 81489699 81762161 - protein_coding KNOWN OTTHUMG00000158978.2 272463 5171 43 ENSG00000222389.1 RNU2-28P chr3 81509476 81509664 + snRNA KNOWN NA 189 189 1 ENSG00000241319.1 SETP6 chr3 81612238 81612805 - processed_pseudogene KNOWN OTTHUMG00000159004.1 568 568 1 ENSG00000240404.1 RP11-142L1.3 chr3 81612790 81613072 + processed_pseudogene KNOWN OTTHUMG00000159003.1 283 283 1 ENSG00000242190.1 RP11-142L1.1 chr3 81762706 81764756 - lincRNA NOVEL OTTHUMG00000159005.1 2051 376 3 ENSG00000121905.8 HPCA chr1 32885994 32898441 + protein_coding KNOWN OTTHUMG00000004017.2 12448 1991 15 ENSG00000242009.1 RP11-359D24.1 chr3 81840547 81922861 + lincRNA NOVEL OTTHUMG00000159007.1 82315 591 5 ENSG00000239440.4 RP11-260O18.1 chr3 81986138 82463675 + lincRNA NOVEL OTTHUMG00000158946.1 477538 2017 13 ENSG00000241367.1 RPL7AP23 chr3 82319172 82320279 - processed_pseudogene KNOWN OTTHUMG00000157328.2 1108 776 2 ENSG00000241095.1 CYP51A1P1 chr3 82806515 82808021 - processed_pseudogene KNOWN OTTHUMG00000158947.1 1507 1507 1 ENSG00000242195.1 SRRM1P2 chr3 83937045 83938236 + processed_pseudogene KNOWN OTTHUMG00000158955.1 1192 1192 1 ENSG00000221380.1 AC108696.1 chr3 84290112 84290253 - miRNA NOVEL NA 142 142 1 ENSG00000266652.1 AC107025.1 chr3 84496576 84496663 + miRNA NOVEL NA 88 88 1 ENSG00000242641.4 LINC00971 chr3 84638406 84881679 - lincRNA NOVEL OTTHUMG00000158981.2 243274 8031 29 ENSG00000241776.1 RP11-651J20.1 chr3 84691681 84692591 - processed_pseudogene KNOWN OTTHUMG00000158977.1 911 911 1 ENSG00000242339.1 RP11-735B13.2 chr3 84884936 84893379 + lincRNA NOVEL OTTHUMG00000159058.1 8444 360 3 ENSG00000169962.4 TAS1R3 chr1 1331314 1335306 + protein_coding KNOWN OTTHUMG00000003071.1 3993 3433 6 ENSG00000121900.17 TMEM54 chr1 32894594 32901438 - protein_coding KNOWN OTTHUMG00000004016.3 6845 1417 29 ENSG00000175161.12 CADM2 chr3 84958981 86074429 + protein_coding KNOWN OTTHUMG00000158990.2 1115449 9990 34 ENSG00000264084.1 MIR5688 chr3 85385710 85385792 + miRNA KNOWN NA 83 83 1 ENSG00000274634.1 AC018361.1 chr3 85615686 85615742 + miRNA NOVEL NA 57 57 1 ENSG00000241648.1 CADM2-AS2 chr3 85799987 85828050 - antisense NOVEL OTTHUMG00000158991.1 28064 768 4 ENSG00000239519.1 CADM2-AS1 chr3 85992183 86028007 - antisense NOVEL OTTHUMG00000158987.1 35825 2656 2 ENSG00000243915.1 PRKRIRP2 chr3 86012561 86015120 + processed_pseudogene KNOWN OTTHUMG00000158989.1 2560 2267 2 ENSG00000201410.1 snoZ40 chr3 86125216 86125287 + snoRNA NOVEL NA 72 72 1 ENSG00000251773.1 RNU6-1129P chr3 86235321 86235424 + snRNA KNOWN NA 104 104 1 ENSG00000239767.1 RP11-789F5.1 chr3 86264555 86267361 - lincRNA NOVEL OTTHUMG00000158994.1 2807 705 2 ENSG00000222934.1 RN7SKP284 chr3 86362132 86362474 + misc_RNA KNOWN NA 343 343 1 ENSG00000116514.15 RNF19B chr1 32936445 32964685 - protein_coding KNOWN OTTHUMG00000004013.4 28241 2610 27 ENSG00000241328.1 RP11-331K15.1 chr3 86481943 86496996 + lincRNA NOVEL OTTHUMG00000158995.1 15054 1321 2 ENSG00000277746.1 RP11-43A1.1 chr3 86816740 86817036 + processed_pseudogene KNOWN OTTHUMG00000187562.1 297 297 1 ENSG00000206538.6 VGLL3 chr3 86937969 86991119 - protein_coding KNOWN OTTHUMG00000158984.1 53151 11574 11 ENSG00000241293.1 PPATP1 chr3 87051192 87052738 - processed_pseudogene KNOWN OTTHUMG00000158985.1 1547 1547 1 ENSG00000281392.1 LINC00506 chr3 87089129 87157069 + lincRNA KNOWN OTTHUMG00000189538.1 67941 5011 10 ENSG00000264119.1 MIR4795 chr3 87226189 87226277 - miRNA KNOWN NA 89 89 1 ENSG00000083937.7 CHMP2B chr3 87227271 87255548 + protein_coding KNOWN OTTHUMG00000158982.3 28278 3106 25 ENSG00000064835.9 POU1F1 chr3 87259404 87276587 - protein_coding KNOWN OTTHUMG00000158992.4 17184 1569 21 ENSG00000239829.1 KRT8P25 chr3 87323268 87324723 + processed_pseudogene KNOWN OTTHUMG00000158986.1 1456 1456 1 ENSG00000280503.1 AC130885.1 chr3 87323969 87324095 - miRNA NOVEL NA 127 127 1 ENSG00000278966.1 FKSG48 chr1 32973667 32974041 + protein_coding KNOWN NA 375 375 1 ENSG00000240902.1 APOOP2 chr3 87594838 87595376 + processed_pseudogene KNOWN OTTHUMG00000158993.1 539 539 1 ENSG00000240255.1 PSMC1P6 chr3 87630301 87631619 - processed_pseudogene KNOWN OTTHUMG00000159001.1 1319 1319 1 ENSG00000239572.1 RP11-451B8.1 chr3 87731402 87793629 - lincRNA NOVEL OTTHUMG00000159002.1 62228 766 2 ENSG00000200703.1 RNU6-873P chr3 87742543 87742649 - snRNA KNOWN NA 107 107 1 ENSG00000221059.1 RNU6ATAC6P chr3 87910220 87910345 + snRNA KNOWN NA 126 126 1 ENSG00000179097.5 HTR1F chr3 87990696 87993835 + protein_coding KNOWN OTTHUMG00000159008.1 3140 3140 1 ENSG00000163320.9 CGGBP1 chr3 88051944 88149885 - protein_coding KNOWN OTTHUMG00000159009.4 97942 6490 17 ENSG00000229729.5 RP11-159G9.5 chr3 88059274 88138973 + lincRNA NOVEL OTTHUMG00000189407.1 79700 1690 15 ENSG00000241535.1 CBX5P1 chr3 88095408 88095968 - processed_pseudogene KNOWN OTTHUMG00000159062.2 561 561 1 ENSG00000175105.5 ZNF654 chr3 88139104 88144665 + protein_coding KNOWN OTTHUMG00000159097.2 5562 4966 2 ENSG00000217644.5 RP4-803A2.1 chr1 32979947 32980472 + processed_pseudogene KNOWN OTTHUMG00000004014.2 526 526 1 ENSG00000179021.8 C3orf38 chr3 88149743 88168729 + protein_coding KNOWN OTTHUMG00000155752.2 18987 3478 10 ENSG00000242159.1 ABCF2P1 chr3 88317156 88319022 + processed_pseudogene KNOWN OTTHUMG00000159043.1 1867 1867 1 ENSG00000207316.1 Y_RNA chr3 88431191 88431309 + misc_RNA NOVEL NA 119 119 1 ENSG00000242365.1 NDUFA5P5 chr3 88601061 88601402 + processed_pseudogene KNOWN OTTHUMG00000159041.1 342 342 1 ENSG00000242705.1 ICE2P2 chr3 88948142 88950928 + processed_pseudogene KNOWN OTTHUMG00000159037.1 2787 2787 1 ENSG00000241861.2 GAPDHP50 chr3 89047442 89048434 - processed_pseudogene KNOWN OTTHUMG00000159042.2 993 993 1 ENSG00000044524.9 EPHA3 chr3 89107524 89482134 + protein_coding KNOWN OTTHUMG00000159040.1 374611 6674 41 ENSG00000240951.1 RP11-91A15.2 chr3 89587886 89588570 - processed_pseudogene KNOWN OTTHUMG00000159039.1 685 685 1 ENSG00000240309.1 RP11-91A15.1 chr3 89588714 89590097 - processed_pseudogene KNOWN OTTHUMG00000159038.1 1384 1384 1 ENSG00000280553.1 AC026305.1 chr3 89617411 89617546 - miRNA NOVEL NA 136 136 1 ENSG00000239670.1 RP4-803A2.2 chr1 32986952 32988233 + unprocessed_pseudogene KNOWN OTTHUMG00000004128.1 1282 863 2 ENSG00000212598.2 U3 chr3 90030284 90030495 + snoRNA NOVEL NA 212 212 1 ENSG00000222490.1 RNU6-712P chr3 90184634 90184733 + snRNA KNOWN NA 100 100 1 ENSG00000189002.10 PROSP chr3 90202316 90257415 - unprocessed_pseudogene KNOWN OTTHUMG00000159045.1 55100 1951 14 ENSG00000271024.1 HSPE1P19 chr3 90261414 90261708 - processed_pseudogene KNOWN OTTHUMG00000184367.1 295 295 1 ENSG00000251727.1 RNU6-488P chr3 93843764 93843862 + snRNA KNOWN NA 99 99 1 ENSG00000184500.13 PROS1 chr3 93873033 93974066 - protein_coding KNOWN OTTHUMG00000150354.3 101034 4429 45 ENSG00000201339.1 Y_RNA chr3 93967926 93968020 + misc_RNA NOVEL NA 95 95 1 ENSG00000200366.1 RNU6-511P chr3 93977029 93977135 + snRNA KNOWN NA 107 107 1 ENSG00000169379.14 ARL13B chr3 93980139 94055668 + protein_coding KNOWN OTTHUMG00000159012.4 75530 4154 72 ENSG00000239614.1 HMGN1P7 chr3 93988634 93988946 - processed_pseudogene KNOWN OTTHUMG00000159010.1 313 313 1 ENSG00000236065.2 RP1-117O3.2 chr1 32987075 33032469 + antisense NOVEL OTTHUMG00000004129.1 45395 1680 2 ENSG00000178750.2 STX19 chr3 94014369 94028610 - protein_coding KNOWN OTTHUMG00000159013.1 14242 1158 2 ENSG00000178700.6 DHFRL1 chr3 94047836 94063389 - protein_coding KNOWN OTTHUMG00000159014.1 15554 4659 15 ENSG00000178694.8 NSUN3 chr3 94062916 94128545 + protein_coding KNOWN OTTHUMG00000159025.1 65630 5635 28 ENSG00000242457.1 RBBP4P2 chr3 94075912 94077175 - processed_pseudogene KNOWN OTTHUMG00000159011.1 1264 1264 1 ENSG00000178660.6 ARMC10P1 chr3 94506766 94507620 - processed_pseudogene KNOWN OTTHUMG00000159019.1 855 855 1 ENSG00000242911.1 RP11-118N24.2 chr3 94935760 94936120 - processed_pseudogene KNOWN OTTHUMG00000159022.1 361 361 1 ENSG00000234629.1 WDR82P1 chr3 94937086 94938024 - processed_pseudogene KNOWN OTTHUMG00000159020.2 939 939 1 ENSG00000239589.4 LINC00879 chr3 94938172 95152509 + lincRNA NOVEL OTTHUMG00000159021.2 214338 1879 27 ENSG00000244048.1 RPS18P6 chr3 95171920 95172377 + processed_pseudogene KNOWN OTTHUMG00000157329.1 458 458 1 ENSG00000244681.1 MTHFD2P1 chr3 95654423 95683193 - transcribed_processed_pseudogene KNOWN OTTHUMG00000159027.1 28771 2709 9 ENSG00000004455.15 AK2 chr1 33007940 33080996 - protein_coding KNOWN OTTHUMG00000004131.6 73057 5727 70 ENSG00000221477.2 AC108739.1 chr3 96166813 96166904 - miRNA NOVEL NA 92 92 1 ENSG00000271671.1 RP11-598F17.2 chr3 96244732 96245335 - processed_pseudogene KNOWN OTTHUMG00000184366.1 604 296 2 ENSG00000243547.1 HNRNPKP4 chr3 96349554 96350939 + processed_pseudogene KNOWN OTTHUMG00000159028.1 1386 1386 1 ENSG00000278103.1 MIR8060 chr3 96359964 96360039 + miRNA KNOWN NA 76 76 1 ENSG00000241815.1 RP11-124D9.1 chr3 96566357 96567103 + processed_pseudogene KNOWN OTTHUMG00000159029.1 747 747 1 ENSG00000199286.1 RNU6-1094P chr3 96608814 96608917 - snRNA KNOWN NA 104 104 1 ENSG00000269028.3 MTRNR2L12 chr3 96617188 96618236 - protein_coding KNOWN OTTHUMG00000175726.3 1049 1049 1 ENSG00000218754.4 RPL18AP8 chr3 96619304 96619831 + processed_pseudogene KNOWN OTTHUMG00000157331.2 528 528 1 ENSG00000212031.1 AC117444.1 chr3 96666194 96666279 - miRNA NOVEL NA 86 86 1 ENSG00000241018.1 RCC2P5 chr3 96753185 96754671 + processed_pseudogene KNOWN OTTHUMG00000159186.1 1487 1487 1 ENSG00000276645.1 Metazoa_SRP chr1 33029232 33029576 - misc_RNA NOVEL NA 345 345 1 ENSG00000176243.9 CDV3P1 chr3 96776945 96777683 + processed_pseudogene KNOWN OTTHUMG00000159188.1 739 739 1 ENSG00000080224.16 EPHA6 chr3 96814581 97752460 + protein_coding KNOWN OTTHUMG00000159208.8 937880 6291 94 ENSG00000251172.1 RP11-529P9.1 chr3 97481177 97481506 - processed_pseudogene KNOWN OTTHUMG00000160108.1 330 330 1 ENSG00000261292.2 RP11-389G6.3 chr3 97759523 97761532 + sense_overlapping NOVEL OTTHUMG00000175728.2 2010 2010 1 ENSG00000113966.8 ARL6 chr3 97764521 97801109 + protein_coding KNOWN OTTHUMG00000159189.1 36589 2261 56 ENSG00000080200.8 CRYBG3 chr3 97822040 97944963 + protein_coding KNOWN OTTHUMG00000159187.2 122924 10929 33 ENSG00000279658.1 RP11-389G6.4 chr3 97836986 97874691 - antisense NOVEL OTTHUMG00000184912.2 37706 646 6 ENSG00000170854.16 MINA chr3 97941818 97972457 - protein_coding KNOWN OTTHUMG00000160107.5 30640 6880 54 ENSG00000183185.8 GABRR3 chr3 97986673 98035304 - protein_coding KNOWN OTTHUMG00000159135.3 48632 5703 25 ENSG00000250750.1 OR5BM1P chr3 98053374 98053739 + unprocessed_pseudogene KNOWN OTTHUMG00000160086.1 366 366 1 ENSG00000142920.15 AZIN2 chr1 33081104 33120530 + protein_coding KNOWN OTTHUMG00000004130.2 39427 6559 123 ENSG00000213439.3 OR5AC1 chr3 98064472 98065396 + polymorphic_pseudogene KNOWN OTTHUMG00000154300.2 925 925 1 ENSG00000196578.4 OR5AC2 chr3 98087173 98088102 + protein_coding KNOWN OTTHUMG00000160083.1 930 930 1 ENSG00000249225.1 RP11-343D2.11 chr3 98099908 98148134 - antisense NOVEL OTTHUMG00000160118.1 48227 467 2 ENSG00000251090.1 OR5AC4P chr3 98104754 98105672 + unprocessed_pseudogene KNOWN OTTHUMG00000160069.1 919 919 1 ENSG00000248365.3 POU5F1P7 chr3 98119191 98119731 + processed_pseudogene KNOWN OTTHUMG00000160082.3 541 541 1 ENSG00000231192.1 OR5H1 chr3 98132698 98133639 + protein_coding KNOWN OTTHUMG00000160070.2 942 942 1 ENSG00000236032.2 OR5H14 chr3 98149326 98150405 + protein_coding KNOWN OTTHUMG00000160079.1 1080 1080 1 ENSG00000233412.3 OR5H15 chr3 98168700 98198138 + protein_coding KNOWN OTTHUMG00000160076.1 29439 1265 3 ENSG00000249321.1 OR5H5P chr3 98197211 98198138 + unprocessed_pseudogene KNOWN OTTHUMG00000160112.1 928 928 1 ENSG00000249975.1 OR5H3P chr3 98207423 98208341 + unprocessed_pseudogene KNOWN OTTHUMG00000160115.1 919 919 1 ENSG00000278997.1 RP11-131M11.2 chr1 33141871 33143230 - TEC KNOWN OTTHUMG00000175793.1 1360 1360 1 ENSG00000248507.1 OR5H4P chr3 98222044 98222966 + unprocessed_pseudogene KNOWN OTTHUMG00000160116.1 923 923 1 ENSG00000251088.1 RP11-325B23.2 chr3 98233651 98457898 + lincRNA NOVEL OTTHUMG00000160119.1 224248 392 4 ENSG00000187900.4 OR5H7P chr3 98238352 98239281 + unprocessed_pseudogene KNOWN OTTHUMG00000160117.1 930 930 1 ENSG00000230301.4 OR5H6 chr3 98264285 98265262 + protein_coding KNOWN NA 978 978 1 ENSG00000279922.1 OR5H6 chr3 98264285 98265262 + polymorphic_pseudogene KNOWN OTTHUMG00000160078.2 978 978 2 ENSG00000197938.4 OR5H2 chr3 98282888 98283832 + protein_coding KNOWN OTTHUMG00000160080.2 945 945 1 ENSG00000232535.1 OR5H8 chr3 98311913 98312843 + polymorphic_pseudogene KNOWN OTTHUMG00000154298.2 931 931 1 ENSG00000196098.2 OR5K4 chr3 98353854 98354819 + protein_coding KNOWN OTTHUMG00000160081.1 966 966 1 ENSG00000206536.1 OR5K3 chr3 98390666 98391631 + protein_coding KNOWN OTTHUMG00000160077.1 966 966 1 ENSG00000244653.1 UBFD1P1 chr3 98434034 98434847 + processed_pseudogene KNOWN OTTHUMG00000159797.1 814 814 1 ENSG00000239945.1 RP11-34P13.8 chr1 89551 91105 - lincRNA NOVEL OTTHUMG00000001097.2 1555 1319 2 ENSG00000107404.16 DVL1 chr1 1335276 1349350 - protein_coding KNOWN OTTHUMG00000003069.2 14075 3486 43 ENSG00000116525.12 TRIM62 chr1 33145402 33182059 - protein_coding KNOWN OTTHUMG00000004132.4 36658 3646 16 ENSG00000232382.1 OR5K1 chr3 98469480 98470576 + protein_coding KNOWN OTTHUMG00000160048.1 1097 1097 1 ENSG00000231861.2 OR5K2 chr3 98497604 98498663 + protein_coding KNOWN OTTHUMG00000160049.2 1060 1060 1 ENSG00000080822.15 CLDND1 chr3 98497912 98523066 - protein_coding KNOWN OTTHUMG00000160050.17 25155 5217 150 ENSG00000080819.5 CPOX chr3 98521132 98593723 - protein_coding KNOWN OTTHUMG00000160016.3 72592 3666 20 ENSG00000248839.1 RP11-227H4.5 chr3 98522570 98525334 + antisense NOVEL OTTHUMG00000160039.1 2765 388 2 ENSG00000250562.1 RPL38P4 chr3 98525061 98525274 - processed_pseudogene KNOWN OTTHUMG00000160020.1 214 214 1 ENSG00000154165.4 GPR15 chr3 98531899 98533150 + protein_coding KNOWN OTTHUMG00000160017.1 1252 1252 1 ENSG00000240827.1 RP11-227H4.1 chr3 98620065 98620618 + processed_pseudogene KNOWN OTTHUMG00000157332.1 554 554 1 ENSG00000266233.1 AC021660.1 chr3 98623949 98624044 - miRNA NOVEL NA 96 96 1 ENSG00000244153.1 WWP1P1 chr3 98657802 98660570 + processed_pseudogene KNOWN OTTHUMG00000159795.1 2769 2769 1 ENSG00000279179.1 RP11-131M11.3 chr1 33162851 33166298 + TEC KNOWN OTTHUMG00000175794.1 3448 3448 1 ENSG00000239445.4 ST3GAL6-AS1 chr3 98714330 98732651 - antisense NOVEL OTTHUMG00000159044.1 18322 843 13 ENSG00000064225.11 ST3GAL6 chr3 98732236 98821201 + protein_coding KNOWN OTTHUMG00000159047.5 88966 6288 187 ENSG00000249274.1 PDLIM1P4 chr3 98782188 98783193 + processed_pseudogene KNOWN OTTHUMG00000159051.1 1006 1006 1 ENSG00000057019.14 DCBLD2 chr3 98795941 98901689 - protein_coding KNOWN OTTHUMG00000151985.2 105749 11274 65 ENSG00000206712.1 RNU6-26P chr3 98804978 98805084 - snRNA KNOWN NA 107 107 1 ENSG00000239462.1 CTD-2021J15.1 chr3 98902424 99018562 + antisense NOVEL OTTHUMG00000159061.1 116139 395 4 ENSG00000207331.1 RNU6-1263P chr3 98908459 98908564 + snRNA KNOWN NA 106 106 1 ENSG00000240476.1 LINC00973 chr3 98981058 98983096 + lincRNA NOVEL OTTHUMG00000159060.1 2039 962 2 ENSG00000275108.1 U7 chr3 98987387 98987449 + snRNA NOVEL NA 63 63 1 ENSG00000241305.1 ACTG1P13 chr3 99215224 99216266 - processed_pseudogene KNOWN OTTHUMG00000159398.1 1043 1043 1 ENSG00000160094.13 ZNF362 chr1 33256545 33300719 + protein_coding KNOWN OTTHUMG00000004124.4 44175 3331 26 ENSG00000240572.1 RP11-121C1.1 chr3 99326377 99326552 - processed_pseudogene KNOWN OTTHUMG00000159397.1 176 176 1 ENSG00000266030.1 AC078828.1 chr3 99366801 99366889 - miRNA NOVEL NA 89 89 1 ENSG00000243296.1 RP11-779P15.1 chr3 99500347 99505508 + lincRNA NOVEL OTTHUMG00000159412.1 5162 458 2 ENSG00000243089.1 RP11-779P15.2 chr3 99507187 99527113 - lincRNA NOVEL OTTHUMG00000159413.1 19927 465 2 ENSG00000244464.1 RP11-201E8.1 chr3 99598064 99623820 + lincRNA NOVEL OTTHUMG00000159418.1 25757 2305 2 ENSG00000144810.14 COL8A1 chr3 99638475 99799226 + protein_coding KNOWN OTTHUMG00000148669.2 160752 9408 32 ENSG00000263810.1 AC055723.1 chr3 99691480 99691571 - miRNA NOVEL NA 92 92 1 ENSG00000273374.1 RP11-383I23.2 chr3 99802699 99806058 - lincRNA NOVEL OTTHUMG00000185856.1 3360 3360 1 ENSG00000184220.9 CMSS1 chr3 99817834 100178603 + protein_coding KNOWN OTTHUMG00000159054.1 360770 4081 56 ENSG00000168386.17 FILIP1L chr3 99830141 100114513 - protein_coding KNOWN OTTHUMG00000159055.2 284373 5903 34 ENSG00000270115.1 RP11-415J8.7 chr1 33261212 33261680 + lincRNA NOVEL OTTHUMG00000183926.1 469 469 1 ENSG00000264897.1 MIR3921 chr3 99964314 99964398 - miRNA KNOWN NA 85 85 1 ENSG00000261533.2 RP11-15N24.4 chr3 100179567 100181732 + sense_overlapping NOVEL OTTHUMG00000175730.2 2166 2166 1 ENSG00000235156.4 TMEM30C chr3 100185824 100194191 + protein_coding KNOWN OTTHUMG00000159056.1 8368 668 5 ENSG00000277000.1 DUSP12P1 chr3 100221268 100223858 - unprocessed_pseudogene KNOWN OTTHUMG00000187563.1 2591 516 4 ENSG00000243974.1 VTI1BP1 chr3 100225374 100226073 + processed_pseudogene KNOWN OTTHUMG00000159057.1 700 700 1 ENSG00000036054.11 TBC1D23 chr3 100261000 100325251 + protein_coding KNOWN OTTHUMG00000159067.1 64252 5168 93 ENSG00000114021.10 NIT2 chr3 100334701 100361635 + protein_coding KNOWN OTTHUMG00000159066.3 26935 9264 46 ENSG00000154174.7 TOMM70A chr3 100363431 100401398 - protein_coding KNOWN OTTHUMG00000159065.2 37968 5387 16 ENSG00000206535.6 LNP1 chr3 100401193 100456319 + protein_coding KNOWN OTTHUMG00000159082.1 55127 2249 12 ENSG00000181458.9 TMEM45A chr3 100492619 100577444 + protein_coding KNOWN OTTHUMG00000150327.3 84826 6005 30 ENSG00000184389.9 A3GALT2 chr1 33306766 33321098 - protein_coding KNOWN OTTHUMG00000004125.3 14333 1023 5 ENSG00000144820.6 GPR128 chr3 100609589 100695479 + protein_coding KNOWN OTTHUMG00000159083.1 85891 4091 37 ENSG00000252989.1 SNORA31 chr3 100646121 100646197 + snoRNA NOVEL NA 77 77 1 ENSG00000243495.1 GMFBP1 chr3 100665050 100665476 - processed_pseudogene KNOWN OTTHUMG00000159084.1 427 427 1 ENSG00000114354.11 TFG chr3 100709331 100748966 + protein_coding KNOWN OTTHUMG00000159085.2 39636 4994 74 ENSG00000154175.15 ABI3BP chr3 100749156 100993515 - protein_coding KNOWN OTTHUMG00000159094.5 244360 10978 396 ENSG00000213431.4 RP11-301G23.1 chr3 100910975 100912175 - processed_pseudogene KNOWN OTTHUMG00000159093.1 1201 1201 1 ENSG00000201642.1 RNU6-865P chr3 100952627 100952733 + snRNA KNOWN NA 107 107 1 ENSG00000242573.1 ACTR3P3 chr3 101163094 101163986 + processed_pseudogene KNOWN OTTHUMG00000159092.1 893 893 1 ENSG00000081148.11 IMPG2 chr3 101222546 101320560 - protein_coding KNOWN OTTHUMG00000159091.3 98015 8337 19 ENSG00000138468.14 SENP7 chr3 101324205 101513241 - protein_coding KNOWN OTTHUMG00000149927.3 189037 6396 125 ENSG00000225313.4 RP11-415J8.3 chr1 33307348 33349245 + antisense NOVEL OTTHUMG00000004126.5 41898 4015 26 ENSG00000241738.1 ZNF90P1 chr3 101357292 101359242 + processed_pseudogene KNOWN OTTHUMG00000159123.1 1951 1951 1 ENSG00000232830.5 RP11-144C15.1 chr3 101414228 101414633 + processed_pseudogene KNOWN OTTHUMG00000159124.1 406 406 1 ENSG00000201554.1 Y_RNA chr3 101458530 101458626 + misc_RNA NOVEL NA 97 97 1 ENSG00000175841.8 FAM172BP chr3 101521891 101522979 + processed_pseudogene KNOWN OTTHUMG00000159125.1 1089 1089 1 ENSG00000174173.6 TRMT10C chr3 101561862 101566446 + protein_coding KNOWN OTTHUMG00000159114.2 4585 1888 4 ENSG00000081154.10 PCNP chr3 101574095 101594437 + protein_coding KNOWN OTTHUMG00000159108.5 20343 3102 31 ENSG00000242299.1 RP11-234A1.1 chr3 101576489 101576947 - processed_pseudogene KNOWN OTTHUMG00000157333.1 459 459 1 ENSG00000243396.1 RP11-454H13.1 chr3 101599243 101599644 - processed_pseudogene KNOWN OTTHUMG00000157341.1 402 402 1 ENSG00000252348.1 RNU6-1256P chr3 101615826 101615928 + snRNA KNOWN NA 103 103 1 ENSG00000212319.1 Y_RNA chr3 101628310 101628406 - misc_RNA NOVEL NA 97 97 1 ENSG00000134686.15 PHC2 chr1 33323623 33431052 - protein_coding KNOWN OTTHUMG00000004133.1 107430 4975 85 ENSG00000201511.1 Y_RNA chr3 101647421 101647522 + misc_RNA NOVEL NA 102 102 1 ENSG00000066422.4 ZBTB11 chr3 101648889 101677495 - protein_coding KNOWN OTTHUMG00000159133.4 28607 7416 15 ENSG00000201121.1 RNY1P12 chr3 101662060 101662164 - misc_RNA KNOWN NA 105 105 1 ENSG00000256628.3 ZBTB11-AS1 chr3 101676475 101679217 + antisense NOVEL OTTHUMG00000159176.1 2743 2743 1 ENSG00000114391.11 RPL24 chr3 101681091 101686782 - protein_coding KNOWN OTTHUMG00000159146.3 5692 2682 25 ENSG00000244119.1 PDCL3P4 chr3 101712472 101713191 + processed_pseudogene KNOWN OTTHUMG00000159184.2 720 720 1 ENSG00000182504.9 CEP97 chr3 101723925 101770562 + protein_coding KNOWN OTTHUMG00000159162.4 46638 9550 47 ENSG00000144815.13 NXPE3 chr3 101779202 101828229 + protein_coding KNOWN OTTHUMG00000159179.13 49028 9474 46 ENSG00000249474.1 RP11-49I4.3 chr3 101823793 101824998 - antisense NOVEL OTTHUMG00000162582.1 1206 360 2 ENSG00000144802.10 NFKBIZ chr3 101827991 101861022 + protein_coding KNOWN OTTHUMG00000159194.17 33032 5902 72 ENSG00000266239.2 AL513327.1 chr1 33332431 33332541 - miRNA NOVEL NA 111 111 1 ENSG00000214407.3 RP11-221J22.1 chr3 101940859 101997926 + lincRNA NOVEL OTTHUMG00000159212.1 57068 2051 4 ENSG00000202177.1 Y_RNA chr3 101955077 101955185 + misc_RNA NOVEL NA 109 109 1 ENSG00000241280.1 RP11-221J22.2 chr3 101960358 101997926 + lincRNA NOVEL OTTHUMG00000159237.3 37569 2157 6 ENSG00000170044.7 ZPLD1 chr3 102099244 102479841 + protein_coding KNOWN OTTHUMG00000159229.5 380598 5130 44 ENSG00000241754.1 RP11-280H21.1 chr3 102663163 102673913 - lincRNA NOVEL OTTHUMG00000159096.1 10751 515 3 ENSG00000201065.1 RNU6-461P chr3 102755064 102755170 - snRNA KNOWN NA 107 107 1 ENSG00000201922.1 RNU1-43P chr3 103159960 103160124 + snRNA KNOWN NA 165 165 1 ENSG00000236691.3 NDUFA4P2 chr3 103240987 103241230 + processed_pseudogene KNOWN OTTHUMG00000159095.1 244 244 1 ENSG00000265328.1 MIR548AB chr3 103524033 103524116 - miRNA KNOWN NA 84 84 1 ENSG00000240107.1 RP11-628J14.1 chr3 103538635 103540487 - processed_pseudogene KNOWN OTTHUMG00000159181.1 1853 1853 1 ENSG00000222112.1 RN7SKP16 chr1 33336566 33336864 - misc_RNA KNOWN NA 299 299 1 ENSG00000243195.1 TUBBP11 chr3 103630661 103630912 + processed_pseudogene KNOWN OTTHUMG00000159180.1 252 252 1 ENSG00000265076.1 AC016970.1 chr3 104054708 104054796 - miRNA NOVEL NA 89 89 1 ENSG00000214405.3 RAP1BP2 chr3 104063039 104063582 + processed_pseudogene KNOWN OTTHUMG00000159183.1 544 544 1 ENSG00000243635.1 RP11-281P11.1 chr3 104502700 104503266 + processed_pseudogene KNOWN OTTHUMG00000159182.1 567 567 1 ENSG00000276619.1 AC069070.1 chr3 104742180 104742270 - miRNA NOVEL NA 91 91 1 ENSG00000278575.1 AC092913.1 chr3 105107659 105107756 + miRNA NOVEL NA 98 98 1 ENSG00000170017.11 ALCAM chr3 105366909 105576900 + protein_coding KNOWN OTTHUMG00000159192.2 209992 7179 86 ENSG00000114423.17 CBLB chr3 105655461 105869552 - protein_coding KNOWN OTTHUMG00000150654.4 214092 11840 72 ENSG00000244652.1 RP11-93B21.1 chr3 106325737 106326293 - processed_pseudogene KNOWN OTTHUMG00000159136.1 557 557 1 ENSG00000200610.1 Y_RNA chr3 106515897 106515998 + misc_RNA NOVEL NA 102 102 1 ENSG00000233246.1 RP11-415J8.5 chr1 33350352 33363245 + antisense NOVEL OTTHUMG00000004127.1 12894 490 3 ENSG00000200361.1 Y_RNA chr3 106688678 106688779 + misc_RNA NOVEL NA 102 102 1 ENSG00000242759.5 LINC00882 chr3 106836811 107240641 - lincRNA NOVEL OTTHUMG00000159196.2 403831 3882 28 ENSG00000239997.1 FCF1P3 chr3 106848671 106849260 + processed_pseudogene KNOWN OTTHUMG00000159139.1 590 590 1 ENSG00000241787.1 MTND4P16 chr3 106894352 106895718 - unprocessed_pseudogene KNOWN OTTHUMG00000159166.1 1367 1367 1 ENSG00000239632.1 RP11-52L11.9 chr3 106895729 106896408 - unprocessed_pseudogene KNOWN OTTHUMG00000159165.1 680 276 2 ENSG00000242214.1 MTND3P6 chr3 106896483 106896821 - unprocessed_pseudogene KNOWN OTTHUMG00000159164.1 339 339 1 ENSG00000242836.1 RP11-52L11.7 chr3 106896891 106897671 - unprocessed_pseudogene KNOWN OTTHUMG00000159147.2 781 781 1 ENSG00000249580.1 RP11-52L11.6 chr3 106897671 106898268 - unprocessed_pseudogene KNOWN OTTHUMG00000159145.1 598 598 1 ENSG00000243658.1 MTND5P16 chr3 106898889 106900591 + unprocessed_pseudogene KNOWN OTTHUMG00000159140.1 1703 1703 1 ENSG00000240034.1 MTND6P6 chr3 106900593 106900855 - unprocessed_pseudogene KNOWN OTTHUMG00000159144.1 263 263 1 ENSG00000275884.1 MIR6808 chr1 1339650 1339708 - miRNA KNOWN NA 59 59 1 ENSG00000221225.1 AL138837.1 chr1 33442025 33442111 - miRNA NOVEL NA 87 87 1 ENSG00000250630.1 RP11-52L11.4 chr3 106900854 106901081 - unprocessed_pseudogene KNOWN OTTHUMG00000159143.1 228 228 1 ENSG00000239586.1 MTND1P16 chr3 106901068 106901965 + unprocessed_pseudogene KNOWN OTTHUMG00000159141.1 898 898 1 ENSG00000240796.1 MTND2P14 chr3 106902173 106902523 + unprocessed_pseudogene KNOWN OTTHUMG00000159142.1 351 351 1 ENSG00000252626.1 RNU6-1308P chr3 107007568 107007670 + snRNA KNOWN NA 103 103 1 ENSG00000239455.1 RP11-561O4.1 chr3 107104911 107107000 - processed_pseudogene KNOWN OTTHUMG00000159167.1 2090 1776 2 ENSG00000243701.4 LINC00883 chr3 107240692 107326964 + lincRNA NOVEL OTTHUMG00000159173.1 86273 4206 13 ENSG00000239828.5 RP11-446H18.5 chr3 107272611 107421304 - lincRNA NOVEL OTTHUMG00000159172.3 148694 3310 28 ENSG00000241218.1 RP11-446H18.1 chr3 107327830 107329197 - processed_pseudogene KNOWN OTTHUMG00000159168.1 1368 1368 1 ENSG00000272597.1 RP11-446H18.6 chr3 107329430 107329962 + lincRNA NOVEL OTTHUMG00000185877.1 533 533 1 ENSG00000220989.1 AC063944.1 chr3 107365182 107365287 + miRNA NOVEL NA 106 106 1 ENSG00000234512.1 TLR12P chr1 33466249 33468954 + unitary_pseudogene KNOWN OTTHUMG00000154094.1 2706 2706 1 ENSG00000138483.2 CCDC54 chr3 107377194 107378637 + protein_coding KNOWN OTTHUMG00000159169.1 1444 1444 1 ENSG00000273125.1 RP11-115H18.1 chr3 107430930 107463912 + lincRNA NOVEL OTTHUMG00000185878.1 32983 1487 3 ENSG00000114439.17 BBX chr3 107522936 107811324 + protein_coding KNOWN OTTHUMG00000150360.1 288389 11877 188 ENSG00000241469.6 LINC00635 chr3 107840228 107882000 - lincRNA NOVEL OTTHUMG00000159195.4 41773 4547 132 ENSG00000240423.1 LINC00636 chr3 107883248 107928907 + lincRNA KNOWN OTTHUMG00000159197.1 45660 1264 3 ENSG00000279277.1 RP11-861A13.3 chr3 108036718 108038445 - TEC KNOWN OTTHUMG00000175746.1 1728 1728 1 ENSG00000196776.13 CD47 chr3 108043298 108091025 - protein_coding KNOWN OTTHUMG00000044216.2 47728 7895 35 ENSG00000271856.1 LINC01215 chr3 108125821 108138610 + lincRNA NOVEL OTTHUMG00000185591.1 12790 2592 3 ENSG00000114446.4 IFT57 chr3 108160812 108222570 - protein_coding KNOWN OTTHUMG00000159223.1 61759 3766 28 ENSG00000114455.12 HHLA2 chr3 108296490 108378285 + protein_coding KNOWN OTTHUMG00000159224.4 81796 3627 85 ENSG00000121903.13 ZSCAN20 chr1 33472645 33496507 + protein_coding KNOWN OTTHUMG00000004173.3 23863 5308 16 ENSG00000221724.1 AC078855.1 chr3 108320392 108320478 + miRNA NOVEL NA 87 87 1 ENSG00000243188.1 HNRNPA1P17 chr3 108325520 108326814 - unprocessed_pseudogene KNOWN OTTHUMG00000159225.1 1295 924 2 ENSG00000144821.8 MYH15 chr3 108380369 108529322 - protein_coding KNOWN OTTHUMG00000159226.2 148954 7694 63 ENSG00000241634.1 RP11-381E24.1 chr3 108543367 108543875 - processed_pseudogene KNOWN OTTHUMG00000157344.1 509 509 1 ENSG00000163507.12 KIAA1524 chr3 108549869 108589644 - protein_coding KNOWN OTTHUMG00000159233.2 39776 4579 109 ENSG00000202379.1 SNORA70 chr3 108574565 108574698 + snoRNA NOVEL NA 134 134 1 ENSG00000276763.1 RP11-381E24.4 chr3 108574683 108575064 + processed_pseudogene KNOWN OTTHUMG00000187565.1 382 382 1 ENSG00000280684.1 AC069499.1 chr3 108585964 108586229 + protein_coding NOVEL NA 266 48 2 ENSG00000198919.11 DZIP3 chr3 108589682 108694846 + protein_coding KNOWN OTTHUMG00000159232.5 105165 6972 124 ENSG00000241777.1 RP11-148O7.2 chr3 108725440 108725536 - unprocessed_pseudogene KNOWN OTTHUMG00000159394.1 97 97 1 ENSG00000235907.2 RP4-580O19.2 chr1 33512008 33512743 - processed_pseudogene KNOWN OTTHUMG00000004175.2 736 736 1 ENSG00000163515.6 RETNLB chr3 108743424 108757384 - protein_coding KNOWN OTTHUMG00000159393.1 13961 1106 8 ENSG00000163519.12 TRAT1 chr3 108822698 108855005 + protein_coding KNOWN OTTHUMG00000159198.1 32308 2528 21 ENSG00000138472.9 GUCA1C chr3 108907792 108953895 - protein_coding KNOWN OTTHUMG00000159204.2 46104 1180 11 ENSG00000114487.8 MORC1 chr3 108958239 109118142 - protein_coding KNOWN OTTHUMG00000159209.2 159904 3764 55 ENSG00000221633.2 U3 chr3 109018909 109019116 - snoRNA NOVEL NA 208 208 1 ENSG00000239314.1 MORC1-AS1 chr3 109101456 109110342 + antisense NOVEL OTTHUMG00000159211.1 8887 564 3 ENSG00000241224.5 FLJ22763 chr3 109118252 109150514 + lincRNA NOVEL OTTHUMG00000159205.4 32263 2550 19 ENSG00000261364.1 RP11-59E19.4 chr3 109176438 109177365 - lincRNA NOVEL OTTHUMG00000175747.1 928 928 1 ENSG00000214381.4 LINC00488 chr3 109178165 109185257 + lincRNA KNOWN OTTHUMG00000159206.1 7093 2520 3 ENSG00000252889.1 RNU6-1236P chr3 109225129 109225227 + snRNA KNOWN NA 99 99 1 ENSG00000121904.16 CSMD2 chr1 33513999 34165842 - protein_coding KNOWN OTTHUMG00000011135.10 651844 18157 337 ENSG00000239288.1 RP11-59E19.3 chr3 109241507 109243125 + processed_pseudogene KNOWN OTTHUMG00000159207.1 1619 1619 1 ENSG00000163530.4 DPPA2 chr3 109293788 109316517 - protein_coding KNOWN OTTHUMG00000159227.1 22730 1383 9 ENSG00000277635.1 Metazoa_SRP chr3 109295239 109295498 + misc_RNA NOVEL NA 260 260 1 ENSG00000121570.11 DPPA4 chr3 109326141 109337572 - protein_coding KNOWN OTTHUMG00000159222.2 11432 4996 35 ENSG00000241257.1 RP11-397K18.1 chr3 109364047 109364234 - processed_pseudogene KNOWN OTTHUMG00000159218.1 188 188 1 ENSG00000244561.1 RP11-702L6.1 chr3 109396616 109397870 + processed_pseudogene KNOWN OTTHUMG00000159214.1 1255 949 2 ENSG00000230618.3 H3F3AP3 chr3 109409678 109410084 - processed_pseudogene KNOWN OTTHUMG00000159215.1 407 407 1 ENSG00000228980.3 LINC01205 chr3 109409990 109495167 + lincRNA NOVEL OTTHUMG00000159217.1 85178 2618 7 ENSG00000244196.1 PPIAP15 chr3 109471329 109471812 - processed_pseudogene KNOWN OTTHUMG00000159216.1 484 484 1 ENSG00000252541.1 AC092905.1 chr3 109497645 109497729 + miRNA NOVEL NA 85 85 1 ENSG00000280715.1 AL161643.1 chr1 33732499 33732635 - miRNA NOVEL NA 137 137 1 ENSG00000265956.1 MIR4445 chr3 109602828 109602897 + miRNA KNOWN NA 70 70 1 ENSG00000242029.1 RP11-457K10.1 chr3 109648107 109810861 + lincRNA NOVEL OTTHUMG00000159213.2 162755 262 3 ENSG00000271249.1 RP11-424I3.1 chr3 109701456 109702218 - processed_pseudogene KNOWN OTTHUMG00000184360.1 763 763 1 ENSG00000214380.4 RP11-457K10.2 chr3 109915976 109916940 - processed_pseudogene KNOWN OTTHUMG00000159219.1 965 618 2 ENSG00000243945.1 RP11-696F10.1 chr3 109977540 109977767 - processed_pseudogene KNOWN OTTHUMG00000159220.1 228 228 1 ENSG00000240895.1 RP11-119D18.1 chr3 110527482 110529582 - lincRNA NOVEL OTTHUMG00000159221.1 2101 801 4 ENSG00000221206.1 RNU6ATAC15P chr3 110551845 110551965 - snRNA KNOWN NA 121 121 1 ENSG00000244722.1 RP11-179A18.1 chr3 110682286 110683154 - processed_pseudogene KNOWN OTTHUMG00000157345.1 869 869 1 ENSG00000201426.1 Y_RNA chr3 110727021 110727121 + misc_RNA NOVEL NA 101 101 1 ENSG00000206532.2 RP11-553A10.1 chr3 110888384 110893476 - lincRNA NOVEL OTTHUMG00000159242.1 5093 1363 5 ENSG00000227000.2 HSPD1P14 chr1 33838523 33840140 + processed_pseudogene KNOWN OTTHUMG00000057513.2 1618 1618 1 ENSG00000242242.4 PVRL3-AS1 chr3 110893708 111071553 - antisense NOVEL OTTHUMG00000159244.1 177846 1665 16 ENSG00000177707.9 PVRL3 chr3 111070071 111275563 + protein_coding KNOWN OTTHUMG00000159239.1 205493 6184 45 ENSG00000153283.11 CD96 chr3 111292719 111665750 + protein_coding KNOWN OTTHUMG00000159275.3 373032 5762 63 ENSG00000239311.1 RP11-615J4.3 chr3 111466313 111497095 - lincRNA NOVEL OTTHUMG00000159241.1 30783 411 2 ENSG00000244142.1 ATP6V0CP2 chr3 111478737 111478943 + processed_pseudogene KNOWN OTTHUMG00000159243.1 207 207 1 ENSG00000240787.1 RP11-615J4.4 chr3 111570638 111571054 - processed_pseudogene KNOWN OTTHUMG00000159276.1 417 417 1 ENSG00000177494.5 ZBED2 chr3 111592900 111595443 - protein_coding KNOWN OTTHUMG00000074061.2 2544 2311 2 ENSG00000244720.1 RP11-402J7.2 chr3 111633672 111635089 + processed_pseudogene KNOWN OTTHUMG00000159278.1 1418 959 3 ENSG00000240891.5 PLCXD2 chr3 111674676 111846447 + protein_coding KNOWN OTTHUMG00000159279.1 171772 2927 16 ENSG00000240766.1 PLCXD2-AS1 chr3 111676736 111677433 - antisense NOVEL OTTHUMG00000159277.1 698 491 2 ENSG00000176256.9 HMGB4 chr1 33860475 33864791 + protein_coding KNOWN OTTHUMG00000013143.3 4317 2561 11 ENSG00000144824.18 PHLDB2 chr3 111732497 111976517 + protein_coding KNOWN OTTHUMG00000159282.1 244021 12109 147 ENSG00000144827.7 ABHD10 chr3 111979010 111993363 + protein_coding KNOWN OTTHUMG00000159280.1 14354 3021 20 ENSG00000144834.11 TAGLN3 chr3 111998664 112013887 + protein_coding KNOWN OTTHUMG00000159281.2 15224 1791 35 ENSG00000239439.1 RFKP2 chr3 112030931 112031649 - processed_pseudogene KNOWN OTTHUMG00000159228.1 719 477 2 ENSG00000176040.12 TMPRSS7 chr3 112034843 112081269 + protein_coding KNOWN OTTHUMG00000157148.2 46427 3050 71 ENSG00000114529.11 C3orf52 chr3 112086335 112131004 + protein_coding KNOWN OTTHUMG00000159230.2 44670 6021 32 ENSG00000207940.1 MIR567 chr3 112112801 112112898 + miRNA KNOWN NA 98 98 1 ENSG00000174500.11 GCSAM chr3 112120841 112133305 - protein_coding KNOWN OTTHUMG00000159231.3 12465 3783 42 ENSG00000261488.1 RP11-757F18.5 chr3 112133423 112135359 + antisense NOVEL OTTHUMG00000175748.1 1937 1937 1 ENSG00000172139.13 SLC9C1 chr3 112140887 112294258 - protein_coding KNOWN OTTHUMG00000159245.2 153372 4250 87 ENSG00000231163.4 CSMD2-AS1 chr1 33868953 33885458 + antisense NOVEL OTTHUMG00000013025.2 16506 2253 22 ENSG00000244144.1 RP11-757F18.3 chr3 112185480 112185998 - processed_pseudogene KNOWN OTTHUMG00000159238.1 519 519 1 ENSG00000239482.5 RP11-90K6.1 chr3 112302478 112332791 + lincRNA NOVEL OTTHUMG00000159246.2 30314 1262 10 ENSG00000091972.17 CD200 chr3 112332347 112362812 + protein_coding KNOWN OTTHUMG00000159248.2 30466 2991 36 ENSG00000243081.2 RP11-231E6.1 chr3 112396647 112409134 - lincRNA NOVEL OTTHUMG00000159250.2 12488 1563 2 ENSG00000186265.8 BTLA chr3 112463968 112499561 - protein_coding KNOWN OTTHUMG00000159255.1 35594 3697 14 ENSG00000242525.1 OR7E100P chr3 112524187 112525201 - unprocessed_pseudogene KNOWN OTTHUMG00000159249.1 1015 1015 1 ENSG00000279349.1 RP11-147G7.3 chr3 112525548 112528142 - TEC KNOWN OTTHUMG00000175752.1 2595 2595 1 ENSG00000144848.9 ATG3 chr3 112532509 112562046 - protein_coding KNOWN OTTHUMG00000159260.21 29538 6111 62 ENSG00000138459.7 SLC35A5 chr3 112561709 112585577 + protein_coding KNOWN OTTHUMG00000159263.1 23869 4853 40 ENSG00000091986.14 CCDC80 chr3 112596794 112649530 - protein_coding KNOWN OTTHUMG00000159265.3 52737 13071 36 ENSG00000201148.1 RNA5SP42 chr1 34112949 34113063 + rRNA KNOWN NA 115 115 1 ENSG00000242308.2 RP11-572C15.3 chr3 112696908 112697706 - unprocessed_pseudogene KNOWN OTTHUMG00000159266.3 799 159 2 ENSG00000240893.1 RP11-572C15.5 chr3 112736447 112749319 - lincRNA NOVEL OTTHUMG00000159320.1 12873 2022 5 ENSG00000242770.2 RP11-180K7.1 chr3 112802478 112812819 + processed_transcript NOVEL OTTHUMG00000159267.2 10342 770 5 ENSG00000206531.9 CD200R1L chr3 112815709 112846856 - protein_coding KNOWN OTTHUMG00000159283.2 31148 1710 31 ENSG00000163606.9 CD200R1 chr3 112921209 112975122 - protein_coding KNOWN OTTHUMG00000159298.1 53914 3905 26 ENSG00000272844.1 RP11-484K9.4 chr3 112990447 112991153 - antisense NOVEL OTTHUMG00000185925.2 707 707 1 ENSG00000163607.13 GTPBP8 chr3 112990918 113015060 + protein_coding KNOWN OTTHUMG00000159268.4 24143 3828 61 ENSG00000163608.13 C3orf17 chr3 113002440 113019861 - protein_coding KNOWN OTTHUMG00000159286.5 17422 6494 124 ENSG00000240057.4 RP11-572M11.4 chr3 113019532 113183301 + antisense NOVEL OTTHUMG00000159327.4 163770 2002 18 ENSG00000243483.1 RP11-572M11.2 chr3 113041390 113041814 - processed_pseudogene KNOWN OTTHUMG00000159324.2 425 425 1 ENSG00000162576.15 MXRA8 chr1 1352689 1361777 - protein_coding KNOWN OTTHUMG00000002973.5 9089 3622 59 ENSG00000142698.13 C1orf94 chr1 34166883 34219131 + protein_coding KNOWN OTTHUMG00000004012.4 52249 2576 14 ENSG00000241219.1 RP11-572M11.1 chr3 113050912 113063443 - lincRNA NOVEL OTTHUMG00000159262.2 12532 1253 3 ENSG00000238593.1 AC078785.1 chr3 113092444 113092525 - miRNA NOVEL NA 82 82 1 ENSG00000243795.1 RP11-572M11.3 chr3 113142350 113167819 - lincRNA NOVEL OTTHUMG00000159355.1 25470 2502 4 ENSG00000144857.13 BOC chr3 113211003 113287459 + protein_coding KNOWN OTTHUMG00000159305.20 76457 10330 130 ENSG00000206530.7 CFAP44 chr3 113286930 113441610 - protein_coding KNOWN OTTHUMG00000159259.25 154681 12160 130 ENSG00000240751.1 RP11-553D4.2 chr3 113360267 113361319 + processed_pseudogene KNOWN OTTHUMG00000159269.2 1053 1053 1 ENSG00000243849.1 CFAP44-AS1 chr3 113403991 113433992 + antisense NOVEL OTTHUMG00000159300.1 30002 1023 8 ENSG00000275670.1 MIR8076 chr3 113432118 113432200 - miRNA KNOWN NA 83 83 1 ENSG00000163611.10 SPICE1 chr3 113442718 113515187 - protein_coding KNOWN OTTHUMG00000159261.16 72470 7941 54 ENSG00000072858.9 SIDT1 chr3 113532296 113629578 + protein_coding KNOWN OTTHUMG00000159299.1 97283 8060 94 ENSG00000221053.1 AC115286.1 chr1 34175866 34175949 - miRNA NOVEL NA 84 84 1 ENSG00000239453.1 SIDT1-AS1 chr3 113588748 113590189 - antisense NOVEL OTTHUMG00000150326.7 1442 465 2 ENSG00000265253.1 MIR4446 chr3 113594876 113594942 + miRNA KNOWN NA 67 67 1 ENSG00000241529.3 RN7SL767P chr3 113632704 113632998 + misc_RNA KNOWN NA 295 295 1 ENSG00000176542.8 KIAA2018 chr3 113648385 113696646 - protein_coding KNOWN OTTHUMG00000159322.4 48262 13738 22 ENSG00000121579.11 NAA50 chr3 113716460 113746300 - protein_coding KNOWN OTTHUMG00000159294.2 29841 6436 44 ENSG00000239280.1 RP11-271C24.3 chr3 113740823 113741254 - processed_pseudogene KNOWN OTTHUMG00000159296.1 432 432 1 ENSG00000242659.1 RP11-271C24.2 chr3 113746872 113747408 - lincRNA NOVEL OTTHUMG00000159297.1 537 303 2 ENSG00000114573.8 ATP6V1A chr3 113747019 113812056 + protein_coding KNOWN OTTHUMG00000159295.1 65038 5130 51 ENSG00000178075.18 GRAMD1C chr3 113828182 113947174 + protein_coding KNOWN OTTHUMG00000159340.3 118993 7814 118 ENSG00000240776.1 RP11-435F17.1 chr3 113850237 113850731 - processed_pseudogene KNOWN OTTHUMG00000157350.1 495 495 1 ENSG00000270241.1 RP4-657M3.2 chr1 34276859 34277292 - processed_pseudogene KNOWN OTTHUMG00000184278.1 434 434 1 ENSG00000241889.1 RP11-435F17.3 chr3 113885298 113886031 + processed_pseudogene KNOWN OTTHUMG00000159339.1 734 734 1 ENSG00000240375.1 VPS26AP1 chr3 113919222 113920200 + processed_pseudogene KNOWN OTTHUMG00000159341.1 979 979 1 ENSG00000273394.1 RP11-255E6.6 chr3 113947005 113947570 - antisense NOVEL OTTHUMG00000185930.1 566 566 1 ENSG00000184307.12 ZDHHC23 chr3 113947901 113965401 + protein_coding KNOWN OTTHUMG00000159335.1 17501 7138 26 ENSG00000163617.9 KIAA1407 chr3 113964137 114056613 - protein_coding KNOWN OTTHUMG00000159337.3 92477 5303 68 ENSG00000270880.1 RP11-255E6.5 chr3 113984037 113984655 + processed_pseudogene KNOWN OTTHUMG00000184315.1 619 619 1 ENSG00000151576.9 QTRTD1 chr3 114005833 114088422 + protein_coding KNOWN OTTHUMG00000159336.2 82590 8054 72 ENSG00000216136.2 AC092896.1 chr3 114019651 114019752 + miRNA NOVEL NA 102 102 1 ENSG00000240912.1 RP11-274J15.2 chr3 114103249 114103628 - processed_pseudogene KNOWN OTTHUMG00000159338.1 380 380 1 ENSG00000151577.11 DRD3 chr3 114128652 114199407 - protein_coding KNOWN OTTHUMG00000159334.3 70756 2101 31 ENSG00000207941.1 MIR552 chr1 34669599 34669694 - miRNA KNOWN NA 96 96 1 ENSG00000241490.1 RP11-553L6.2 chr3 114214313 114236204 + antisense NOVEL OTTHUMG00000159333.1 21892 3101 5 ENSG00000240487.1 RP11-553L6.3 chr3 114231398 114233021 - processed_pseudogene KNOWN OTTHUMG00000159330.1 1624 1624 1 ENSG00000174255.6 ZNF80 chr3 114234631 114237578 - protein_coding KNOWN OTTHUMG00000159332.2 2948 2948 5 ENSG00000181847.10 TIGIT chr3 114276913 114310288 + protein_coding KNOWN OTTHUMG00000159331.1 33376 6091 26 ENSG00000259976.1 RP11-553L6.5 chr3 114314501 114316179 - lincRNA NOVEL OTTHUMG00000175755.1 1679 1679 1 ENSG00000207770.1 MIR568 chr3 114316475 114316569 - miRNA KNOWN NA 95 95 1 ENSG00000181722.14 ZBTB20 chr3 114338094 115147271 - protein_coding KNOWN OTTHUMG00000159366.1 809178 8279 126 ENSG00000241560.4 ZBTB20-AS1 chr3 114351811 114388978 + antisense NOVEL OTTHUMG00000159368.1 37168 2035 24 ENSG00000242290.2 RP11-197K3.1 chr3 114445521 114529452 + lincRNA NOVEL OTTHUMG00000159367.2 83932 1855 11 ENSG00000241295.1 ZBTB20-AS2 chr3 114684580 114687609 + lincRNA NOVEL OTTHUMG00000159363.1 3030 372 2 ENSG00000163866.8 SMIM12 chr1 34712737 34859816 - protein_coding KNOWN OTTHUMG00000004375.3 147080 8091 16 ENSG00000264623.2 AC078986.1 chr3 114743433 114743543 - miRNA NOVEL NA 111 111 1 ENSG00000239946.1 ZBTB20-AS3 chr3 114873114 114876514 + lincRNA NOVEL OTTHUMG00000159365.1 3401 464 3 ENSG00000240002.1 YBX1P3 chr3 114930541 114931449 + processed_pseudogene KNOWN OTTHUMG00000159369.1 909 909 1 ENSG00000242767.1 ZBTB20-AS4 chr3 115100423 115103061 + lincRNA NOVEL OTTHUMG00000159364.1 2639 675 2 ENSG00000279131.1 AC069063.1 chr3 115113420 115114210 - protein_coding KNOWN NA 791 66 2 ENSG00000279380.1 AC069063.2 chr3 115120172 115121489 + protein_coding KNOWN NA 1318 1318 1 ENSG00000242880.1 RP11-190P13.2 chr3 115251196 115285347 + lincRNA NOVEL OTTHUMG00000159303.1 34152 533 5 ENSG00000244157.1 EIF4E2P2 chr3 115279125 115279860 + processed_pseudogene KNOWN OTTHUMG00000159302.1 736 736 1 ENSG00000172020.11 GAP43 chr3 115623324 115721490 + protein_coding KNOWN OTTHUMG00000133758.2 98167 2087 7 ENSG00000241596.1 RP11-326J18.1 chr3 115658533 115661279 + sense_intronic NOVEL OTTHUMG00000159304.1 2747 562 2 ENSG00000189280.3 GJB5 chr1 34755047 34758512 + protein_coding KNOWN OTTHUMG00000004053.1 3466 1355 2 ENSG00000185565.10 LSAMP chr3 115802363 117139389 - protein_coding KNOWN OTTHUMG00000159308.6 1337027 10330 41 ENSG00000243359.3 RN7SL815P chr3 115837870 115838159 + misc_RNA KNOWN NA 290 290 1 ENSG00000240922.1 LSAMP-AS1 chr3 116360024 116370090 + antisense KNOWN OTTHUMG00000159307.2 10067 553 4 ENSG00000241397.1 LINC00903 chr3 116552473 116568264 + antisense NOVEL OTTHUMG00000159325.1 15792 223 2 ENSG00000241156.3 RN7SL582P chr3 116582552 116582830 - misc_RNA KNOWN NA 279 279 1 ENSG00000198406.7 BZW1P2 chr3 116645902 116646727 - processed_pseudogene KNOWN OTTHUMG00000159328.2 826 826 1 ENSG00000243197.6 TUSC7 chr3 116709235 116723581 + antisense NOVEL OTTHUMG00000159329.5 14347 3324 26 ENSG00000278072.1 AC108713.1 chr3 116716460 116716624 + misc_RNA NOVEL NA 165 165 1 ENSG00000265433.1 MIR4447 chr3 116850277 116850367 - miRNA KNOWN NA 91 91 1 ENSG00000274732.1 BC040587 chr3 116921328 116921479 + misc_RNA NOVEL NA 152 152 1 ENSG00000189433.5 GJB4 chr1 34759741 34763724 + protein_coding KNOWN OTTHUMG00000004052.1 3984 2840 2 ENSG00000242385.1 LINC00901 chr3 116921431 116932238 + antisense NOVEL OTTHUMG00000159347.2 10808 1452 2 ENSG00000200372.1 RNU5E-8P chr3 116965112 116965227 - snRNA KNOWN NA 116 116 1 ENSG00000243014.1 PTMAP8 chr3 117026698 117027039 + processed_pseudogene KNOWN OTTHUMG00000159348.2 342 342 1 ENSG00000206889.1 RNU6-1200P chr3 117544205 117544311 + snRNA KNOWN NA 107 107 1 ENSG00000239268.2 RP11-384F7.2 chr3 117672154 117997592 - lincRNA NOVEL OTTHUMG00000159530.1 325439 554 2 ENSG00000240393.1 RP11-768G7.1 chr3 117674342 117675144 - processed_pseudogene KNOWN OTTHUMG00000159343.1 803 803 1 ENSG00000241213.1 RP11-768G7.2 chr3 117678693 117690932 - lincRNA NOVEL OTTHUMG00000159344.1 12240 969 9 ENSG00000242816.1 RP11-768G7.3 chr3 117790673 117793765 + lincRNA NOVEL OTTHUMG00000159345.1 3093 510 2 ENSG00000243276.4 RP11-384F7.1 chr3 118004819 118557668 - lincRNA NOVEL OTTHUMG00000159346.3 552850 1069 10 ENSG00000144847.11 IGSF11 chr3 118900557 119146068 - protein_coding KNOWN OTTHUMG00000159387.3 245512 4899 64 ENSG00000255811.1 RP1-34M23.5 chr1 34761426 34788097 - antisense NOVEL OTTHUMG00000167758.1 26672 560 2 ENSG00000239877.2 IGSF11-AS1 chr3 118943073 118948241 + antisense NOVEL OTTHUMG00000159386.2 5169 1604 4 ENSG00000163424.7 C3orf30 chr3 119146150 119160042 + protein_coding KNOWN OTTHUMG00000159349.3 13893 1964 14 ENSG00000251012.1 RP11-484M3.5 chr3 119147375 119187807 + protein_coding PUTATIVE OTTHUMG00000160109.2 40433 246 2 ENSG00000114638.6 UPK1B chr3 119173517 119205153 + protein_coding KNOWN OTTHUMG00000159354.2 31637 2266 35 ENSG00000121578.11 B4GALT4 chr3 119211732 119241103 - protein_coding KNOWN OTTHUMG00000159358.15 29372 7145 99 ENSG00000240254.1 B4GALT4-AS1 chr3 119226486 119290666 + antisense NOVEL OTTHUMG00000159385.2 64181 544 4 ENSG00000031081.9 ARHGAP31 chr3 119294373 119420714 + protein_coding KNOWN OTTHUMG00000159362.3 126342 9384 18 ENSG00000242829.1 RPS26P21 chr3 119298665 119299012 + processed_pseudogene KNOWN OTTHUMG00000157351.1 348 348 1 ENSG00000241155.1 ARHGAP31-AS1 chr3 119314293 119322760 - antisense NOVEL OTTHUMG00000159360.1 8468 624 2 ENSG00000207310.1 RNU6-1127P chr3 119341834 119341940 - snRNA KNOWN NA 107 107 1 ENSG00000216162.1 AL121988.1 chr1 34778561 34778644 - miRNA NOVEL NA 84 84 1 ENSG00000176142.11 TMEM39A chr3 119429500 119468830 - protein_coding KNOWN OTTHUMG00000159361.29 39331 5333 59 ENSG00000163389.9 POGLUT1 chr3 119468938 119494708 + protein_coding KNOWN OTTHUMG00000159379.4 25771 7097 50 ENSG00000272662.1 RP11-190C22.8 chr3 119497678 119498181 - lincRNA NOVEL OTTHUMG00000185933.1 504 504 1 ENSG00000113845.8 TIMMDC1 chr3 119498532 119525090 + protein_coding KNOWN OTTHUMG00000159388.14 26559 2730 39 ENSG00000121594.10 CD80 chr3 119524293 119559602 - protein_coding KNOWN OTTHUMG00000159419.1 35310 3201 19 ENSG00000272967.1 RP11-190C22.9 chr3 119579212 119579650 - antisense NOVEL OTTHUMG00000185934.1 439 439 1 ENSG00000144843.10 ADPRH chr3 119579268 119589945 + protein_coding KNOWN OTTHUMG00000159420.1 10678 4615 25 ENSG00000144837.7 PLA1A chr3 119597842 119629811 + protein_coding KNOWN OTTHUMG00000159425.5 31970 2202 52 ENSG00000242052.1 RP11-190C22.1 chr3 119635526 119636150 - processed_pseudogene KNOWN OTTHUMG00000157355.1 625 625 1 ENSG00000121577.12 POPDC2 chr3 119636457 119665324 - protein_coding KNOWN OTTHUMG00000159438.3 28868 2445 34 ENSG00000188910.7 GJB3 chr1 34781189 34786369 + protein_coding KNOWN OTTHUMG00000004051.1 5181 2387 4 ENSG00000138495.5 COX17 chr3 119654513 119677454 - protein_coding KNOWN OTTHUMG00000159433.3 22942 2172 24 ENSG00000183833.15 MAATS1 chr3 119703022 119767102 + protein_coding KNOWN OTTHUMG00000159422.1 64081 7106 133 ENSG00000239994.2 RP11-169N13.4 chr3 119744139 119750350 - antisense NOVEL OTTHUMG00000159421.2 6212 266 3 ENSG00000144852.15 NR1I2 chr3 119780484 119818485 + protein_coding KNOWN OTTHUMG00000159400.2 38002 5381 36 ENSG00000240471.1 PHBP8 chr3 119791829 119792553 + processed_pseudogene KNOWN OTTHUMG00000159405.1 725 725 1 ENSG00000082701.13 GSK3B chr3 119821323 120094417 - protein_coding KNOWN OTTHUMG00000133765.4 273095 8006 28 ENSG00000239835.1 RP11-767L7.1 chr3 120028740 120029868 + processed_pseudogene KNOWN OTTHUMG00000159402.1 1129 1129 1 ENSG00000241546.1 RP11-767L7.2 chr3 120041190 120041537 + processed_pseudogene KNOWN OTTHUMG00000159403.1 348 348 1 ENSG00000276607.2 AC092910.1 chr3 120084550 120084657 - miRNA NOVEL NA 108 108 1 ENSG00000242622.1 RP11-18H7.1 chr3 120094895 120136783 + lincRNA NOVEL OTTHUMG00000159401.1 41889 2194 10 ENSG00000175756.12 AURKAIP1 chr1 1373730 1375495 - protein_coding KNOWN OTTHUMG00000001413.3 1766 1669 19 ENSG00000187513.8 GJA4 chr1 34792998 34795747 + protein_coding KNOWN OTTHUMG00000004050.1 2750 1717 4 ENSG00000244308.2 RN7SL762P chr3 120110498 120110786 - misc_RNA KNOWN NA 289 289 1 ENSG00000244139.3 RN7SL397P chr3 120121909 120122206 + misc_RNA KNOWN NA 298 298 1 ENSG00000175697.9 GPR156 chr3 120164645 120285094 - protein_coding KNOWN OTTHUMG00000159406.1 120450 6058 35 ENSG00000206721.1 Y_RNA chr3 120210320 120210421 + misc_RNA NOVEL NA 102 102 1 ENSG00000240882.1 RP11-174O3.1 chr3 120306726 120307952 + processed_pseudogene KNOWN OTTHUMG00000159408.1 1227 1227 1 ENSG00000163428.3 LRRC58 chr3 120324509 120349339 - protein_coding KNOWN OTTHUMG00000159407.1 24831 7903 4 ENSG00000240661.1 RP11-174O3.3 chr3 120349510 120367998 + antisense NOVEL OTTHUMG00000159404.1 18489 813 3 ENSG00000242613.1 RP11-174O3.4 chr3 120388029 120389315 + processed_pseudogene KNOWN OTTHUMG00000159439.1 1287 308 2 ENSG00000163430.8 FSTL1 chr3 120392293 120451253 - protein_coding KNOWN OTTHUMG00000159440.1 58961 8727 49 ENSG00000240774.1 RP11-359H3.4 chr3 120484171 120484527 - processed_pseudogene KNOWN OTTHUMG00000159664.1 357 357 1 ENSG00000230163.1 RP5-997D16.2 chr1 34850694 34851555 + antisense NOVEL OTTHUMG00000004048.1 862 720 2 ENSG00000244441.1 RP11-359H3.1 chr3 120512850 120513188 + processed_pseudogene KNOWN OTTHUMG00000157356.1 339 339 1 ENSG00000065518.7 NDUFB4 chr3 120596309 120602500 + protein_coding KNOWN OTTHUMG00000159442.1 6192 1889 14 ENSG00000113924.10 HGD chr3 120628173 120682571 - protein_coding KNOWN OTTHUMG00000159441.3 54399 2983 60 ENSG00000144840.7 RABL3 chr3 120686681 120742993 - protein_coding KNOWN OTTHUMG00000159668.1 56313 4684 57 ENSG00000240452.1 RP11-567P17.1 chr3 120722024 120722311 + unprocessed_pseudogene KNOWN OTTHUMG00000159663.1 288 288 1 ENSG00000243257.1 RP11-567P17.2 chr3 120722458 120722646 + unprocessed_pseudogene KNOWN OTTHUMG00000159665.1 189 189 1 ENSG00000153767.8 GTF2E1 chr3 120742637 120783069 + protein_coding KNOWN OTTHUMG00000159667.1 40433 3370 16 ENSG00000213371.4 NAP1L1P3 chr3 120805866 120806745 + processed_pseudogene KNOWN OTTHUMG00000159666.1 880 880 1 ENSG00000243593.1 RP11-500K19.1 chr3 120833440 120836360 - lincRNA NOVEL OTTHUMG00000159469.1 2921 747 2 ENSG00000145087.11 STXBP5L chr3 120908072 121424761 + protein_coding KNOWN OTTHUMG00000159426.3 516690 11085 166 ENSG00000116544.10 DLGAP3 chr1 34865436 34929585 - protein_coding KNOWN OTTHUMG00000004049.1 64150 3977 25 ENSG00000270782.1 RP11-500K19.2 chr3 120924612 120925158 - processed_pseudogene KNOWN OTTHUMG00000184359.1 547 201 2 ENSG00000264477.1 MIR5682 chr3 121049640 121049715 + miRNA KNOWN NA 76 76 1 ENSG00000243813.1 RP11-678L1.1 chr3 121099108 121099774 + processed_pseudogene KNOWN OTTHUMG00000159468.1 667 667 1 ENSG00000242103.1 RP11-10G15.4 chr3 121356991 121357940 + processed_pseudogene KNOWN OTTHUMG00000159467.1 950 950 1 ENSG00000051341.12 POLQ chr3 121431427 121546641 - protein_coding KNOWN OTTHUMG00000159396.1 115215 9400 71 ENSG00000242445.1 RPL7AP11 chr3 121494110 121494908 + processed_pseudogene KNOWN OTTHUMG00000157358.1 799 799 1 ENSG00000186103.3 ARGFX chr3 121570704 121586634 + protein_coding KNOWN OTTHUMG00000159395.2 15931 992 4 ENSG00000163833.7 FBXO40 chr3 121593119 121630295 + protein_coding KNOWN OTTHUMG00000159410.2 37177 5929 4 ENSG00000180353.9 HCLS1 chr3 121631399 121660927 - protein_coding KNOWN OTTHUMG00000159409.2 29529 5093 83 ENSG00000243544.3 RN7SL172P chr3 121653994 121654296 - misc_RNA KNOWN NA 303 303 1 ENSG00000241014.1 RP11-244H3.1 chr1 34974356 34985313 - processed_transcript NOVEL OTTHUMG00000004046.3 10958 3346 5 ENSG00000222057.1 RNU4-62P chr3 121655475 121655604 - snRNA KNOWN NA 130 130 1 ENSG00000173230.14 GOLGB1 chr3 121663199 121749767 - protein_coding KNOWN OTTHUMG00000159411.1 86569 11865 120 ENSG00000173226.15 IQCB1 chr3 121769763 121835079 - protein_coding KNOWN OTTHUMG00000128677.6 65317 3049 63 ENSG00000145088.7 EAF2 chr3 121835183 121886526 + protein_coding KNOWN OTTHUMG00000159424.1 51344 1770 26 ENSG00000163406.9 SLC15A2 chr3 121894089 121944102 + protein_coding KNOWN OTTHUMG00000159423.2 50014 6210 65 ENSG00000263678.1 AC072031.1 chr3 121922098 121922182 - miRNA NOVEL NA 85 85 1 ENSG00000145103.11 ILDR1 chr3 121987323 122022204 - protein_coding KNOWN OTTHUMG00000159481.1 34882 2953 34 ENSG00000202388.1 Y_RNA chr3 122025195 122025304 - misc_RNA NOVEL NA 110 110 1 ENSG00000114013.14 CD86 chr3 122055366 122121139 + protein_coding KNOWN OTTHUMG00000159482.2 65774 3433 46 ENSG00000036828.12 CASR chr3 122183683 122286503 + protein_coding KNOWN OTTHUMG00000159491.2 102821 5398 16 ENSG00000271741.1 RP11-244H3.4 chr1 34981533 35031741 - protein_coding NOVEL OTTHUMG00000185379.1 50209 3099 17 ENSG00000221474.1 AC068754.1 chr3 122281853 122281922 + miRNA NOVEL NA 70 70 1 ENSG00000240236.1 HNRNPA1P23 chr3 122317609 122318741 + processed_pseudogene KNOWN OTTHUMG00000159493.1 1133 1133 1 ENSG00000121552.3 CSTA chr3 122325244 122341972 + protein_coding KNOWN OTTHUMG00000159488.1 16729 1373 5 ENSG00000160124.8 CCDC58 chr3 122359591 122383231 - protein_coding KNOWN OTTHUMG00000159490.1 23641 1746 29 ENSG00000114023.14 FAM162A chr3 122384176 122412334 + protein_coding KNOWN OTTHUMG00000159494.1 28159 3793 15 ENSG00000196981.3 WDR5B chr3 122412332 122416051 - protein_coding KNOWN OTTHUMG00000159489.1 3720 3720 1 ENSG00000272758.4 RP11-299J3.8 chr3 122416207 122443180 + antisense NOVEL OTTHUMG00000185942.1 26974 2891 13 ENSG00000242531.1 RP11-299J3.6 chr3 122416882 122417012 - unprocessed_pseudogene KNOWN OTTHUMG00000159492.1 131 131 1 ENSG00000114030.11 KPNA1 chr3 122421949 122514945 - protein_coding KNOWN OTTHUMG00000159487.1 92997 8451 101 ENSG00000275348.1 RP11-592P9.3 chr3 122482990 122483229 + processed_pseudogene KNOWN OTTHUMG00000187569.1 240 240 1 ENSG00000243749.1 ZMYM6NB chr1 34981535 34985353 - protein_coding KNOWN OTTHUMG00000004158.1 3819 922 3 ENSG00000138496.15 PARP9 chr3 122527924 122564577 - protein_coding KNOWN OTTHUMG00000159522.2 36654 8938 60 ENSG00000163840.8 DTX3L chr3 122564238 122575203 + protein_coding KNOWN OTTHUMG00000159524.1 10966 5868 9 ENSG00000173200.11 PARP15 chr3 122577602 122639047 + protein_coding KNOWN OTTHUMG00000159523.3 61446 5507 53 ENSG00000243918.1 EIF4BP8 chr3 122660613 122662438 + processed_pseudogene KNOWN OTTHUMG00000159551.1 1826 1826 1 ENSG00000173193.12 PARP14 chr3 122680618 122730840 + protein_coding KNOWN OTTHUMG00000159552.2 50223 10495 50 ENSG00000169087.9 HSPBAP1 chr3 122740003 122793824 - protein_coding KNOWN OTTHUMG00000159550.1 53822 5434 29 ENSG00000138463.8 DIRC2 chr3 122794795 122881139 + protein_coding KNOWN OTTHUMG00000159553.2 86345 3596 17 ENSG00000273033.2 RP11-67L2.2 chr3 122886941 122892416 + lincRNA NOVEL OTTHUMG00000185944.2 5476 5476 1 ENSG00000082684.13 SEMA5B chr3 122909193 123028605 - protein_coding KNOWN OTTHUMG00000140392.2 119413 6224 156 ENSG00000221211.1 AC078794.1 chr3 122926996 122927121 - miRNA NOVEL NA 126 126 1 ENSG00000163867.15 ZMYM6 chr1 34986165 35031968 - protein_coding KNOWN OTTHUMG00000004163.4 45804 9591 58 ENSG00000065485.16 PDIA5 chr3 123067062 123225227 + protein_coding KNOWN OTTHUMG00000159558.2 158166 4030 64 ENSG00000275891.1 MIR7110 chr3 123161794 123161879 + miRNA KNOWN NA 86 86 1 ENSG00000121542.10 SEC22A chr3 123201927 123274130 + protein_coding KNOWN OTTHUMG00000159495.15 72204 4698 52 ENSG00000273454.1 RP11-797D24.3 chr3 123277353 123277904 + lincRNA NOVEL OTTHUMG00000185945.1 552 552 1 ENSG00000173175.13 ADCY5 chr3 123282296 123449758 - protein_coding KNOWN OTTHUMG00000159517.5 167463 8873 103 ENSG00000272678.1 RP11-797D24.4 chr3 123283593 123283983 + antisense NOVEL OTTHUMG00000185946.1 391 391 1 ENSG00000206527.8 PTPLB chr3 123490820 123585185 - protein_coding KNOWN OTTHUMG00000159529.4 94366 5351 20 ENSG00000239523.4 MYLK-AS1 chr3 123585542 123644568 + antisense NOVEL OTTHUMG00000159536.2 59027 980 9 ENSG00000065534.17 MYLK chr3 123610049 123884331 - protein_coding KNOWN OTTHUMG00000141304.12 274283 22167 278 ENSG00000250174.4 MYLK-AS2 chr3 123689644 123692407 + antisense NOVEL OTTHUMG00000159965.1 2764 827 5 ENSG00000233940.1 RP11-248I9.2 chr1 35053468 35059271 + processed_pseudogene KNOWN OTTHUMG00000004160.1 5804 478 2 ENSG00000273123.1 RP11-9N20.3 chr3 123715851 123716399 + antisense NOVEL OTTHUMG00000185948.1 549 549 1 ENSG00000207002.1 SNORA5 chr3 123814077 123814207 + snoRNA NOVEL NA 131 131 1 ENSG00000175455.13 CCDC14 chr3 123897305 123961408 - protein_coding KNOWN OTTHUMG00000153005.21 64104 11423 148 ENSG00000065371.16 ROPN1 chr3 123968521 123992178 - protein_coding KNOWN OTTHUMG00000159556.7 23658 4518 47 ENSG00000238512.1 AC117401.1 chr3 124061994 124062084 - miRNA NOVEL NA 91 91 1 ENSG00000160145.14 KALRN chr3 124080023 124726325 + protein_coding KNOWN OTTHUMG00000125545.13 646303 24490 317 ENSG00000266383.1 MIR5002 chr3 124132929 124133025 + miRNA KNOWN NA 97 97 1 ENSG00000240622.1 RPL7P15 chr3 124151960 124153063 - processed_pseudogene KNOWN OTTHUMG00000157359.1 1104 712 2 ENSG00000276656.1 MIR6083 chr3 124374332 124374437 + miRNA KNOWN NA 106 106 1 ENSG00000252751.1 RNU6-143P chr3 124407691 124407783 + snRNA KNOWN NA 93 93 1 ENSG00000197056.8 ZMYM1 chr1 35059786 35115859 + protein_coding KNOWN OTTHUMG00000004374.2 56074 4828 80 ENSG00000263775.1 AC080008.1 chr3 124696938 124697036 - miRNA NOVEL NA 99 99 1 ENSG00000260391.2 RP11-71H17.7 chr3 124723788 124726325 + sense_overlapping NOVEL OTTHUMG00000175759.2 2538 2538 1 ENSG00000114491.12 UMPS chr3 124730366 124749273 + protein_coding KNOWN OTTHUMG00000159431.4 18908 7579 50 ENSG00000265981.1 MIR544B chr3 124732439 124732516 + miRNA KNOWN NA 78 78 1 ENSG00000242199.1 RP11-71H17.1 chr3 124733418 124733754 - processed_pseudogene KNOWN OTTHUMG00000157361.1 337 337 1 ENSG00000082781.10 ITGB5 chr3 124761948 124901418 - protein_coding KNOWN OTTHUMG00000159432.8 139471 6447 70 ENSG00000244286.1 ITGB5-AS1 chr3 124781155 124787757 + antisense NOVEL OTTHUMG00000159559.1 6603 460 2 ENSG00000280042.1 RP11-71H17.8 chr3 124791119 124793104 - TEC KNOWN OTTHUMG00000177472.1 1986 1986 1 ENSG00000276626.1 7SK chr3 124792319 124792562 - misc_RNA NOVEL NA 244 244 1 ENSG00000243986.2 ENO1P3 chr3 124862094 124863317 - processed_pseudogene KNOWN OTTHUMG00000159521.2 1224 1224 1 ENSG00000228348.1 EFCAB14P1 chr1 35122022 35122484 + processed_pseudogene KNOWN OTTHUMG00000004161.1 463 463 1 ENSG00000173702.6 MUC13 chr3 124905442 124953819 - protein_coding KNOWN OTTHUMG00000159484.4 48378 3499 29 ENSG00000173706.11 HEG1 chr3 124965710 125055958 - protein_coding KNOWN OTTHUMG00000159486.2 90249 9925 34 ENSG00000252642.1 RNA5SP137 chr3 125058304 125058438 - rRNA KNOWN NA 135 135 1 ENSG00000221955.9 SLC12A8 chr3 125082636 125212864 - protein_coding KNOWN OTTHUMG00000159483.9 130229 5586 109 ENSG00000199327.1 RNU6-230P chr3 125119097 125119200 - snRNA KNOWN NA 104 104 1 ENSG00000264986.1 MIR5092 chr3 125151465 125151552 - miRNA KNOWN NA 88 88 1 ENSG00000163848.17 ZNF148 chr3 125225561 125375354 - protein_coding KNOWN OTTHUMG00000159448.4 149794 10574 74 ENSG00000229048.5 DUTP1 chr3 125310881 125311350 + processed_pseudogene KNOWN OTTHUMG00000159443.1 470 470 1 ENSG00000243508.1 RP11-775J23.2 chr3 125344085 125344797 - processed_pseudogene KNOWN OTTHUMG00000159444.1 713 713 1 ENSG00000252953.1 RNU6-232P chr3 125388934 125388997 + snRNA KNOWN NA 64 64 1 ENSG00000223663.2 RP5-890O3.3 chr1 1378666 1379032 + processed_pseudogene KNOWN OTTHUMG00000002972.2 367 367 1 ENSG00000116560.9 SFPQ chr1 35176378 35193148 - protein_coding KNOWN OTTHUMG00000004157.7 16771 7426 47 ENSG00000114520.9 SNX4 chr3 125446644 125520197 - protein_coding KNOWN OTTHUMG00000159575.3 73554 2709 45 ENSG00000201800.1 Y_RNA chr3 125516979 125517086 + misc_RNA NOVEL NA 108 108 1 ENSG00000252965.1 Y_RNA chr3 125528244 125528349 - misc_RNA NOVEL NA 106 106 1 ENSG00000144909.7 OSBPL11 chr3 125528858 125595090 - protein_coding KNOWN OTTHUMG00000159571.1 66233 4191 13 ENSG00000281802.1 AC016959.1 chr3 125558838 125558960 + miRNA NOVEL NA 123 123 1 ENSG00000243072.1 GS1-388B5.2 chr3 125679573 125679781 + processed_pseudogene KNOWN OTTHUMG00000159570.1 209 209 1 ENSG00000242001.1 GS1-388B5.1 chr3 125681305 125681453 + processed_pseudogene KNOWN OTTHUMG00000159568.1 149 149 1 ENSG00000266857.1 AF186996.2 chr3 125690256 125690343 + miRNA NOVEL NA 88 88 1 ENSG00000234458.4 OR7E130P chr3 125703349 125704312 + unprocessed_pseudogene KNOWN OTTHUMG00000159572.1 964 964 1 ENSG00000243429.1 OR7E29P chr3 125712139 125713045 + unprocessed_pseudogene KNOWN OTTHUMG00000159569.1 907 907 1 ENSG00000201868.1 Y_RNA chr1 35195969 35196062 + misc_RNA NOVEL NA 94 94 1 ENSG00000228963.3 OR7E93P chr3 125724539 125725445 + unprocessed_pseudogene KNOWN OTTHUMG00000159574.1 907 907 1 ENSG00000239978.1 OR7E53P chr3 125734295 125735198 + unprocessed_pseudogene KNOWN OTTHUMG00000159565.1 904 904 1 ENSG00000265166.1 AF186996.1 chr3 125736216 125736303 + miRNA NOVEL NA 88 88 1 ENSG00000179170.11 OR7E97P chr3 125747084 125748098 + unprocessed_pseudogene KNOWN OTTHUMG00000159566.1 1015 1015 1 ENSG00000239432.1 GS1-388B5.8 chr3 125756086 125756462 + processed_pseudogene KNOWN OTTHUMG00000159564.1 377 377 1 ENSG00000272840.1 RP11-379B18.6 chr3 125774714 125797953 + lincRNA NOVEL OTTHUMG00000185972.1 23240 373 2 ENSG00000239804.1 RP11-379B18.1 chr3 125787888 125788146 - processed_pseudogene KNOWN OTTHUMG00000157368.1 259 259 1 ENSG00000221737.1 MIR548I1 chr3 125790404 125790552 - miRNA KNOWN NA 149 149 1 ENSG00000242229.1 RPS3AP14 chr3 125795106 125795885 + processed_pseudogene KNOWN OTTHUMG00000157370.1 780 780 1 ENSG00000241346.1 SNRPCP11 chr3 125816082 125816286 - processed_pseudogene KNOWN OTTHUMG00000159573.1 205 205 1 ENSG00000146463.10 ZMYM4 chr1 35268967 35422058 + protein_coding KNOWN OTTHUMG00000004241.3 153092 7647 69 ENSG00000241288.6 RP11-379B18.5 chr3 125827238 125916384 - processed_transcript NOVEL OTTHUMG00000159585.5 89147 6732 70 ENSG00000241278.1 ENPP7P4 chr3 125848223 125909372 + unprocessed_pseudogene KNOWN OTTHUMG00000159567.2 61150 1086 4 ENSG00000248787.1 RP11-666A20.4 chr3 125908005 125910272 - lincRNA NOVEL OTTHUMG00000162648.1 2268 427 3 ENSG00000171084.14 FAM86JP chr3 125916620 125930024 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000159586.1 13405 2519 21 ENSG00000189366.8 ALG1L chr3 125929275 125937039 - protein_coding KNOWN OTTHUMG00000159588.1 7765 843 12 ENSG00000241439.1 RP11-666A20.3 chr3 125958556 125958817 + processed_pseudogene KNOWN OTTHUMG00000159590.1 262 262 1 ENSG00000114547.8 ROPN1B chr3 125969144 125983454 + protein_coding KNOWN OTTHUMG00000162651.5 14311 4048 47 ENSG00000114544.14 SLC41A3 chr3 126006355 126101561 - protein_coding KNOWN OTTHUMG00000162678.8 95207 6592 147 ENSG00000248607.1 RP11-158I23.1 chr3 126056923 126058228 + antisense NOVEL OTTHUMG00000162638.1 1306 379 2 ENSG00000265911.1 AC117422.1 chr3 126069064 126069147 + miRNA NOVEL NA 84 84 1 ENSG00000240374.3 RN7SL503P chr1 35292196 35292498 - misc_RNA KNOWN NA 303 303 1 ENSG00000250012.1 RP11-124N2.1 chr3 126084220 126095349 + antisense NOVEL OTTHUMG00000162639.2 11130 645 5 ENSG00000144908.12 ALDH1L1 chr3 126103562 126197994 - protein_coding KNOWN OTTHUMG00000125551.3 94433 13712 201 ENSG00000250218.1 ALDH1L1-AS1 chr3 126103640 126108069 + antisense NOVEL OTTHUMG00000162640.1 4430 437 4 ENSG00000272020.1 U1 chr3 126160283 126160445 - snRNA NOVEL NA 163 163 1 ENSG00000246022.2 ALDH1L1-AS2 chr3 126180065 126210169 + antisense NOVEL OTTHUMG00000162642.2 30105 2719 8 ENSG00000250934.1 RP11-71E19.1 chr3 126266796 126291279 + lincRNA NOVEL OTTHUMG00000162679.1 24484 795 5 ENSG00000251448.1 RP11-71E19.2 chr3 126288867 126294024 - lincRNA NOVEL OTTHUMG00000162677.1 5158 254 3 ENSG00000163884.3 KLF15 chr3 126342635 126357442 - protein_coding KNOWN OTTHUMG00000162689.1 14808 2848 5 ENSG00000249833.4 CCDC37-AS1 chr3 126393032 126394851 - antisense NOVEL OTTHUMG00000162688.3 1820 986 7 ENSG00000163885.10 CCDC37 chr3 126394939 126436556 + protein_coding KNOWN OTTHUMG00000162691.6 41618 3352 54 ENSG00000201542.1 SNORA62 chr1 35310274 35310425 + snoRNA NOVEL NA 152 152 1 ENSG00000279328.1 RP11-203H19.2 chr3 126432796 126434569 - TEC KNOWN OTTHUMG00000162696.1 1774 1774 1 ENSG00000070476.13 ZXDC chr3 126437601 126475919 - protein_coding KNOWN OTTHUMG00000162754.4 38319 7357 27 ENSG00000159650.7 UROC1 chr3 126481281 126517773 - protein_coding KNOWN OTTHUMG00000162753.2 36493 3329 41 ENSG00000180767.8 CHST13 chr3 126524283 126543291 + protein_coding KNOWN OTTHUMG00000162721.2 19009 1789 7 ENSG00000180697.7 C3orf22 chr3 126526999 126558965 - protein_coding KNOWN OTTHUMG00000162731.2 31967 2187 10 ENSG00000201968.1 RNA5SP138 chr3 126564565 126564678 - rRNA KNOWN NA 114 114 1 ENSG00000197763.11 TXNRD3 chr3 126571779 126655155 - protein_coding KNOWN OTTHUMG00000162733.11 83377 3809 42 ENSG00000206483.5 TXNRD3NB chr3 126571789 126572636 - protein_coding KNOWN OTTHUMG00000162732.2 848 738 2 ENSG00000248557.1 RP11-390G14.1 chr3 126624792 126626061 + processed_pseudogene KNOWN OTTHUMG00000162636.2 1270 528 2 ENSG00000198284.8 NUP210P1 chr3 126660609 126671939 + transcribed_processed_pseudogene KNOWN OTTHUMG00000159577.1 11331 1194 14 ENSG00000229994.1 RPL5P4 chr1 35350722 35351607 + processed_pseudogene KNOWN OTTHUMG00000004240.1 886 886 1 ENSG00000248850.1 RP11-605F14.2 chr3 126672106 126673223 - processed_pseudogene KNOWN OTTHUMG00000159578.1 1118 1118 1 ENSG00000159685.9 CHCHD6 chr3 126704220 126960406 + protein_coding KNOWN OTTHUMG00000159601.2 256187 2763 46 ENSG00000249558.1 RCC2P4 chr3 126766434 126767475 - processed_pseudogene KNOWN OTTHUMG00000159602.1 1042 1042 1 ENSG00000280053.1 RP11-61K12.2 chr3 126973065 126976426 + TEC KNOWN OTTHUMG00000175765.1 3362 3362 1 ENSG00000114554.10 PLXNA1 chr3 126988594 127037392 + protein_coding KNOWN OTTHUMG00000044222.3 48799 10944 46 ENSG00000214324.4 C3orf56 chr3 127193131 127198185 + protein_coding KNOWN OTTHUMG00000159593.2 5055 1740 4 ENSG00000212556.1 Y_RNA chr3 127202372 127202473 - misc_RNA NOVEL NA 102 102 1 ENSG00000243016.1 RP11-305F5.2 chr3 127221194 127221881 - unprocessed_pseudogene KNOWN OTTHUMG00000159592.1 688 688 1 ENSG00000201288.1 RNU6-1047P chr3 127240968 127241074 - snRNA KNOWN NA 107 107 1 ENSG00000239620.1 RP11-88I21.1 chr3 127284081 127284681 - processed_pseudogene KNOWN OTTHUMG00000159594.1 601 601 1 ENSG00000227409.1 ZMYM4-AS1 chr1 35358822 35366077 - antisense NOVEL OTTHUMG00000004369.1 7256 459 2 ENSG00000244215.1 RP11-88I21.2 chr3 127322307 127390670 - lincRNA NOVEL OTTHUMG00000159640.1 68364 927 5 ENSG00000239921.2 LINC01471 chr3 127480690 127536812 - lincRNA NOVEL OTTHUMG00000159643.2 56123 3039 7 ENSG00000240562.1 RP11-59J16.2 chr3 127489553 127490787 + lincRNA NOVEL OTTHUMG00000159638.1 1235 697 4 ENSG00000163870.13 TPRA1 chr3 127573069 127598251 - protein_coding KNOWN OTTHUMG00000159639.5 25183 3596 91 ENSG00000275067.1 MIR6825 chr3 127575266 127575331 - miRNA KNOWN NA 66 66 1 ENSG00000276083.1 MIR7976 chr3 127587111 127587176 - miRNA KNOWN NA 66 66 1 ENSG00000073111.12 MCM2 chr3 127598223 127622436 + protein_coding KNOWN OTTHUMG00000159637.7 24214 4902 76 ENSG00000114631.10 PODXL2 chr3 127629181 127672809 + protein_coding KNOWN OTTHUMG00000159642.1 43629 2186 8 ENSG00000221413.1 AC023593.1 chr3 127664704 127664810 + miRNA NOVEL NA 107 107 1 ENSG00000114626.16 ABTB1 chr3 127672935 127680920 + protein_coding KNOWN OTTHUMG00000159636.1 7986 6149 103 ENSG00000278702.1 Metazoa_SRP chr1 35399997 35400319 + misc_RNA NOVEL NA 323 323 1 ENSG00000074416.12 MGLL chr3 127689062 127823250 - protein_coding KNOWN OTTHUMG00000159641.3 134189 10102 74 ENSG00000187715.12 KBTBD12 chr3 127915232 127987671 + protein_coding KNOWN OTTHUMG00000150508.1 72440 5818 30 ENSG00000201210.1 RNA5SP139 chr3 127963608 127963724 + rRNA KNOWN NA 117 117 1 ENSG00000058262.8 SEC61A1 chr3 128051641 128071683 + protein_coding KNOWN OTTHUMG00000159624.4 20043 4697 49 ENSG00000175792.10 RUVBL1 chr3 128064778 128153914 - protein_coding KNOWN OTTHUMG00000159658.3 89137 6860 42 ENSG00000222627.1 RNU2-37P chr3 128075073 128075249 - snRNA KNOWN NA 177 177 1 ENSG00000239608.1 RUVBL1-AS1 chr3 128075810 128079056 + antisense NOVEL OTTHUMG00000159660.1 3247 588 2 ENSG00000212344.1 RNU6-823P chr3 128141875 128141977 - snRNA KNOWN NA 103 103 1 ENSG00000132394.9 EEFSEC chr3 128153454 128408646 + protein_coding KNOWN OTTHUMG00000159659.3 255193 2421 17 ENSG00000179407.3 DNAJB8 chr3 128462439 128467248 - protein_coding KNOWN OTTHUMG00000159690.2 4810 3645 5 ENSG00000142687.16 KIAA0319L chr1 35433490 35557950 - protein_coding KNOWN OTTHUMG00000004370.5 124461 9629 143 ENSG00000242049.1 DNAJB8-AS1 chr3 128463594 128472317 + antisense NOVEL OTTHUMG00000159687.1 8724 1798 3 ENSG00000179348.10 GATA2 chr3 128479427 128493185 - protein_coding KNOWN OTTHUMG00000159689.1 13759 4459 27 ENSG00000244300.2 GATA2-AS1 chr3 128489212 128502348 + antisense NOVEL OTTHUMG00000159693.1 13137 2283 7 ENSG00000239405.1 TMED10P2 chr3 128538020 128538631 + processed_pseudogene KNOWN OTTHUMG00000159692.1 612 612 1 ENSG00000198685.3 LINC01565 chr3 128572000 128576086 - lincRNA KNOWN OTTHUMG00000159688.1 4087 2697 4 ENSG00000163902.10 RPN1 chr3 128619970 128681075 - protein_coding KNOWN OTTHUMG00000159691.3 61106 3992 38 ENSG00000277250.1 Metazoa_SRP chr3 128673681 128674021 - misc_RNA NOVEL NA 341 341 1 ENSG00000280957.1 AC079945.1 chr3 128673691 128673771 - miRNA NOVEL NA 81 81 1 ENSG00000242551.2 POU5F1P6 chr3 128674735 128677005 - unprocessed_pseudogene KNOWN OTTHUMG00000159808.2 2271 990 3 ENSG00000207130.1 SNORA24 chr3 128714571 128714705 - snoRNA NOVEL NA 135 135 1 ENSG00000236274.1 RP4-728D4.3 chr1 35509742 35511438 + processed_pseudogene KNOWN OTTHUMG00000004373.1 1697 1003 4 ENSG00000075785.11 RAB7A chr3 128726122 128814796 + protein_coding KNOWN OTTHUMG00000159812.1 88675 2717 34 ENSG00000239503.1 MARK2P8 chr3 128748538 128749489 - processed_pseudogene KNOWN OTTHUMG00000159814.1 952 952 1 ENSG00000242992.3 FTH1P4 chr3 128764466 128765018 - processed_pseudogene KNOWN OTTHUMG00000159811.1 553 553 1 ENSG00000244232.3 RN7SL698P chr3 128785147 128785448 + misc_RNA KNOWN NA 302 302 1 ENSG00000239483.1 RPS15AP16 chr3 128798841 128799201 - processed_pseudogene KNOWN OTTHUMG00000157372.1 361 361 1 ENSG00000244065.1 MARK2P17 chr3 128843564 128844404 - processed_pseudogene KNOWN OTTHUMG00000159809.1 841 841 1 ENSG00000243022.1 MARK3P3 chr3 128848673 128849399 - processed_pseudogene KNOWN OTTHUMG00000159810.1 727 727 1 ENSG00000242062.1 MARK2P6 chr3 128852112 128853008 - processed_pseudogene KNOWN OTTHUMG00000159807.1 897 897 1 ENSG00000261159.1 RP11-723O4.9 chr3 128859716 128860526 - lincRNA NOVEL OTTHUMG00000175779.1 811 811 1 ENSG00000231305.3 RP11-723O4.2 chr3 128861313 128871540 - antisense NOVEL OTTHUMG00000159813.1 10228 1456 7 ENSG00000221978.10 CCNL2 chr1 1385711 1399328 - protein_coding KNOWN OTTHUMG00000002917.5 13618 6850 142 ENSG00000020129.14 NCDN chr1 35557473 35567274 + protein_coding KNOWN OTTHUMG00000059204.2 9802 4917 33 ENSG00000250796.1 RP11-723O4.3 chr3 128869624 128870026 + processed_pseudogene KNOWN OTTHUMG00000159941.1 403 329 2 ENSG00000177646.16 ACAD9 chr3 128879596 128916067 + protein_coding KNOWN OTTHUMG00000159942.2 36472 4327 133 ENSG00000114656.9 KIAA1257 chr3 128909866 129002690 - protein_coding KNOWN OTTHUMG00000159946.1 92825 7811 32 ENSG00000187695.6 RP11-723O4.6 chr3 128909874 128971330 - protein_coding NOVEL OTTHUMG00000162589.1 61457 2426 10 ENSG00000279507.1 RP11-723O4.7 chr3 128914833 128915060 - TEC KNOWN OTTHUMG00000162591.1 228 228 1 ENSG00000114654.7 EFCC1 chr3 129001629 129040742 + protein_coding KNOWN OTTHUMG00000158996.3 39114 2945 14 ENSG00000249505.1 RP11-434H6.2 chr3 129045763 129046921 + processed_pseudogene KNOWN OTTHUMG00000159945.1 1159 1159 1 ENSG00000169704.4 GP9 chr3 129060767 129062406 + protein_coding KNOWN OTTHUMG00000159944.1 1640 889 3 ENSG00000172780.15 RAB43 chr3 129087569 129122801 - protein_coding KNOWN OTTHUMG00000137364.2 35233 4991 29 ENSG00000261796.1 ISY1-RAB43 chr3 129087575 129161036 - protein_coding KNOWN OTTHUMG00000177122.1 73462 4868 13 ENSG00000239636.1 RP4-728D4.2 chr1 35569813 35577729 - antisense NOVEL OTTHUMG00000004372.1 7917 1030 5 ENSG00000273174.1 RP11-434H6.6 chr3 129123439 129124003 + antisense NOVEL OTTHUMG00000185973.1 565 565 1 ENSG00000240682.8 ISY1 chr3 129127415 129161293 - protein_coding KNOWN OTTHUMG00000137365.6 33879 4102 57 ENSG00000273437.1 RP11-434H6.7 chr3 129163606 129163940 - lincRNA NOVEL OTTHUMG00000185974.1 335 335 1 ENSG00000169714.15 CNBP chr3 129169484 129183922 - protein_coding KNOWN OTTHUMG00000159943.3 14439 1927 45 ENSG00000241673.1 RPS27P12 chr3 129218093 129218350 - processed_pseudogene KNOWN OTTHUMG00000157373.1 258 258 1 ENSG00000181789.13 COPG1 chr3 129249606 129277773 + protein_coding KNOWN OTTHUMG00000159451.5 28168 4425 81 ENSG00000278658.1 MIR6826 chr3 129272146 129272243 + miRNA KNOWN NA 98 98 1 ENSG00000183624.12 HMCES chr3 129278828 129306186 + protein_coding KNOWN OTTHUMG00000159452.4 27359 2783 47 ENSG00000184897.5 H1FX chr3 129314771 129316277 - protein_coding KNOWN OTTHUMG00000159450.2 1507 1507 1 ENSG00000206417.7 H1FX-AS1 chr3 129315392 129326225 + antisense NOVEL OTTHUMG00000159459.4 10834 3420 15 ENSG00000116819.6 TFAP2E chr1 35573370 35595328 + protein_coding KNOWN OTTHUMG00000004388.1 21959 2189 7 ENSG00000280727.1 AC137695.1 chr3 129316261 129316391 - miRNA NOVEL NA 131 131 1 ENSG00000248916.1 NUP210P3 chr3 129323046 129325426 - unprocessed_pseudogene KNOWN OTTHUMG00000159449.1 2381 388 3 ENSG00000270492.1 RP13-685P2.8 chr3 129334586 129335074 + processed_pseudogene KNOWN OTTHUMG00000184311.1 489 489 1 ENSG00000270773.1 RP13-685P2.7 chr3 129345411 129346164 + processed_pseudogene KNOWN OTTHUMG00000184299.2 754 754 1 ENSG00000244932.2 RP11-529F4.1 chr3 129381298 129394149 + unprocessed_pseudogene KNOWN OTTHUMG00000159466.1 12852 517 5 ENSG00000251474.5 RPL32P3 chr3 129382922 129399655 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000159465.3 16734 4504 26 ENSG00000280589.1 AL449212.1 chr3 129397192 129397294 - miRNA NOVEL NA 103 103 1 ENSG00000207088.1 SNORA7B chr3 129397210 129397348 - snoRNA KNOWN NA 139 139 1 ENSG00000172771.10 EFCAB12 chr3 129401321 129428651 - protein_coding KNOWN OTTHUMG00000159464.1 27331 7789 35 ENSG00000129071.8 MBD4 chr3 129430944 129440179 - protein_coding KNOWN OTTHUMG00000159463.4 9236 3356 54 ENSG00000126067.10 PSMB2 chr1 35599544 35641844 - protein_coding KNOWN OTTHUMG00000004169.2 42301 4843 16 ENSG00000163913.10 IFT122 chr3 129440036 129520507 + protein_coding KNOWN OTTHUMG00000159516.12 80472 9636 399 ENSG00000163914.4 RHO chr3 129528640 129535169 + protein_coding KNOWN OTTHUMG00000159542.2 6530 2592 5 ENSG00000178804.6 H1FOO chr3 129543214 129551467 + protein_coding KNOWN OTTHUMG00000159541.5 8254 1264 9 ENSG00000004399.11 PLXND1 chr3 129555175 129606818 - protein_coding KNOWN OTTHUMG00000159547.14 51644 9738 103 ENSG00000239437.3 RN7SL752P chr3 129591349 129591635 + misc_RNA KNOWN NA 287 287 1 ENSG00000248659.1 RP11-263I1.1 chr3 129632019 129632492 - unprocessed_pseudogene KNOWN OTTHUMG00000159576.1 474 474 1 ENSG00000172765.15 TMCC1 chr3 129647792 129893576 - protein_coding KNOWN OTTHUMG00000159579.6 245785 7819 55 ENSG00000202412.1 RNY3P13 chr3 129818932 129819033 + misc_RNA KNOWN NA 102 102 1 ENSG00000203644.3 RP11-332M2.1 chr3 129847048 129847957 - sense_intronic NOVEL OTTHUMG00000186578.1 910 910 1 ENSG00000271270.4 TMCC1-AS1 chr3 129893871 129918575 + antisense NOVEL OTTHUMG00000185164.1 24705 4623 11 ENSG00000142686.7 C1orf216 chr1 35713875 35719472 - protein_coding KNOWN OTTHUMG00000004167.3 5598 3629 7 ENSG00000250643.1 RP11-93K22.6 chr3 129954105 129969294 - antisense NOVEL OTTHUMG00000159635.1 15190 466 4 ENSG00000170893.3 TRH chr3 129974305 129977938 + protein_coding KNOWN OTTHUMG00000159634.3 3634 1978 6 ENSG00000248459.1 RP11-93K22.1 chr3 129998531 129998936 + processed_pseudogene KNOWN OTTHUMG00000157374.1 406 406 1 ENSG00000249869.1 RP11-93K22.7 chr3 130013182 130013541 - processed_pseudogene KNOWN OTTHUMG00000159716.1 360 360 1 ENSG00000180770.3 OR7E129P chr3 130021553 130022520 - unprocessed_pseudogene KNOWN OTTHUMG00000159715.1 968 968 1 ENSG00000263767.1 AC083906.1 chr3 130033458 130033545 - miRNA NOVEL NA 88 88 1 ENSG00000251178.1 OR7E21P chr3 130034553 130035539 - unprocessed_pseudogene KNOWN OTTHUMG00000159728.1 987 987 1 ENSG00000251610.1 RP11-77P16.3 chr3 130055724 130055920 - unprocessed_pseudogene KNOWN OTTHUMG00000159730.2 197 197 1 ENSG00000251287.7 ALG1L2 chr3 130081831 130113227 + protein_coding KNOWN OTTHUMG00000159782.3 31397 1499 19 ENSG00000248243.1 RP11-93K22.13 chr3 130089433 130094304 - lincRNA NOVEL OTTHUMG00000159896.1 4872 713 4 ENSG00000092853.12 CLSPN chr1 35720218 35769967 - protein_coding KNOWN OTTHUMG00000004168.6 49750 5411 106 ENSG00000266849.1 AC083906.2 chr3 130096373 130096438 + miRNA NOVEL NA 66 66 1 ENSG00000253540.4 FAM86HP chr3 130099092 130111472 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000159796.5 12381 1301 21 ENSG00000249846.5 RP11-77P16.4 chr3 130112550 130120579 + lincRNA NOVEL OTTHUMG00000159926.2 8030 1974 8 ENSG00000248618.1 ENPP7P3 chr3 130167790 130168030 - processed_pseudogene KNOWN OTTHUMG00000159714.3 241 241 1 ENSG00000250580.1 SNRPCP8 chr3 130199708 130199918 + processed_pseudogene KNOWN OTTHUMG00000159925.1 211 211 1 ENSG00000228252.7 COL6A4P2 chr3 130212823 130273806 + unitary_pseudogene KNOWN OTTHUMG00000154984.6 60984 3814 51 ENSG00000249253.1 RP11-77P16.1 chr3 130293337 130293760 + processed_pseudogene KNOWN OTTHUMG00000159726.2 424 424 1 ENSG00000172752.13 COL6A5 chr3 130345516 130484844 + protein_coding KNOWN OTTHUMG00000159712.3 139329 9586 106 ENSG00000222683.1 AC093004.1 chr3 130369227 130369344 - miRNA NOVEL NA 118 118 1 ENSG00000206384.9 COL6A6 chr3 130560334 130678155 + protein_coding KNOWN OTTHUMG00000159653.5 117822 9720 74 ENSG00000232335.1 RP11-435D7.3 chr1 35739389 35743576 + antisense NOVEL OTTHUMG00000008426.1 4188 539 2 ENSG00000196455.6 PIK3R4 chr3 130678935 130746829 - protein_coding KNOWN OTTHUMG00000159645.2 67895 5376 50 ENSG00000222783.1 RN7SKP212 chr3 130811768 130812095 - misc_RNA KNOWN NA 328 328 1 ENSG00000232829.3 GSTO3P chr3 130827659 130828376 + processed_pseudogene KNOWN OTTHUMG00000159700.1 718 718 1 ENSG00000017260.18 ATP2C1 chr3 130850595 131016712 + protein_coding KNOWN OTTHUMG00000136802.7 166118 8533 429 ENSG00000280127.1 AC055733.1 chr3 130868872 130869246 - protein_coding KNOWN NA 375 375 1 ENSG00000250592.1 RP11-39E3.3 chr3 130899414 130929976 - antisense NOVEL OTTHUMG00000159705.1 30563 340 2 ENSG00000252894.2 Y_RNA chr3 130914340 130914452 - misc_RNA NOVEL NA 113 113 1 ENSG00000249098.1 RP11-39E3.4 chr3 130918226 130919120 - processed_pseudogene KNOWN OTTHUMG00000159701.1 895 572 2 ENSG00000251579.1 RP11-39E3.5 chr3 130927754 130928276 - processed_pseudogene KNOWN OTTHUMG00000159702.1 523 523 1 ENSG00000034533.10 ASTE1 chr3 131013875 131027649 - protein_coding KNOWN OTTHUMG00000159644.1 13775 3427 36 ENSG00000134698.10 AGO4 chr1 35808172 35857890 + protein_coding KNOWN OTTHUMG00000004243.4 49719 7267 23 ENSG00000114670.12 NEK11 chr3 131026850 131350465 + protein_coding KNOWN OTTHUMG00000159654.12 323616 5355 176 ENSG00000250129.4 RP11-265F19.1 chr3 131053317 131072339 - antisense NOVEL OTTHUMG00000159610.4 19023 718 9 ENSG00000201550.1 RNU6-726P chr3 131092821 131092927 - snRNA KNOWN NA 107 107 1 ENSG00000212073.1 AC121332.1 chr3 131111670 131111758 - miRNA NOVEL NA 89 89 1 ENSG00000250608.1 RP11-933H2.4 chr3 131325092 131381475 - processed_transcript NOVEL OTTHUMG00000159632.10 56384 4200 11 ENSG00000246082.2 NUDT16P1 chr3 131361898 131365122 + unitary_pseudogene KNOWN OTTHUMG00000159755.7 3225 2312 8 ENSG00000198585.10 NUDT16 chr3 131381671 131388830 + protein_coding KNOWN OTTHUMG00000159623.11 7160 7029 9 ENSG00000261167.1 RP11-517B11.7 chr3 131455126 131458598 - sense_overlapping NOVEL OTTHUMG00000175784.1 3473 3473 1 ENSG00000114686.7 MRPL3 chr3 131462212 131502983 - protein_coding KNOWN OTTHUMG00000159607.5 40772 2715 63 ENSG00000249020.1 SNORA58 chr3 131479097 131479233 - snoRNA NOVEL NA 137 137 1 ENSG00000092847.9 AGO1 chr1 35869808 35929610 + protein_coding KNOWN OTTHUMG00000007381.3 59803 12886 38 ENSG00000248468.1 RP11-517B11.4 chr3 131517831 131520880 + antisense NOVEL OTTHUMG00000159671.1 3050 575 2 ENSG00000248530.1 BCL2L12P1 chr3 131526447 131527179 + processed_pseudogene KNOWN OTTHUMG00000159630.2 733 733 1 ENSG00000196353.10 CPNE4 chr3 131533555 132285410 - protein_coding KNOWN OTTHUMG00000159631.13 751856 6427 143 ENSG00000251447.1 RP11-517B11.6 chr3 131537571 131537685 - unprocessed_pseudogene KNOWN OTTHUMG00000159669.1 115 115 1 ENSG00000265859.1 MIR5704 chr3 131985855 131985931 - miRNA KNOWN NA 77 77 1 ENSG00000240854.1 RP11-64K7.1 chr3 132175402 132176711 + processed_pseudogene KNOWN OTTHUMG00000159651.1 1310 1310 1 ENSG00000242899.1 RPL7P16 chr3 132243528 132244265 - processed_pseudogene KNOWN OTTHUMG00000157375.1 738 738 1 ENSG00000014257.14 ACPP chr3 132317367 132368298 + protein_coding KNOWN OTTHUMG00000159650.4 50932 4193 56 ENSG00000240890.2 RP11-65E22.2 chr3 132386522 132389074 + processed_pseudogene KNOWN OTTHUMG00000159672.2 2553 2247 2 ENSG00000213264.3 NIP7P2 chr3 132401253 132401796 + processed_pseudogene KNOWN OTTHUMG00000159673.2 544 544 1 ENSG00000271164.1 RP4-789D17.4 chr1 35873270 35873752 - processed_pseudogene KNOWN OTTHUMG00000184282.1 483 483 1 ENSG00000138246.14 DNAJC13 chr3 132417526 132539032 + protein_coding KNOWN OTTHUMG00000159674.5 121507 9562 103 ENSG00000240303.6 ACAD11 chr3 132558138 132660723 - protein_coding KNOWN OTTHUMG00000159780.5 102586 5674 111 ENSG00000274810.2 NPHP3-ACAD11 chr3 132558142 132722459 - protein_coding NOVEL OTTHUMG00000187276.2 164318 7784 45 ENSG00000129048.6 ACKR4 chr3 132597237 132618967 + protein_coding KNOWN OTTHUMG00000159768.3 21731 2273 5 ENSG00000251614.1 HSPA8P19 chr3 132645831 132650383 + processed_pseudogene KNOWN OTTHUMG00000159927.1 4553 1517 5 ENSG00000081307.11 UBA5 chr3 132654446 132678097 + protein_coding KNOWN OTTHUMG00000159759.18 23652 6827 97 ENSG00000113971.17 NPHP3 chr3 132680609 132722442 - protein_coding KNOWN OTTHUMG00000159713.3 41834 9701 119 ENSG00000248724.5 NPHP3-AS1 chr3 132721750 132874223 + antisense KNOWN OTTHUMG00000159854.2 152474 5215 16 ENSG00000250355.1 RP11-79L21.1 chr3 132857069 132857224 + processed_pseudogene KNOWN OTTHUMG00000159790.1 156 156 1 ENSG00000249725.1 RP11-469L4.1 chr3 133015004 133037052 - lincRNA NOVEL OTTHUMG00000159720.1 22049 384 2 ENSG00000224870.5 RP4-758J18.2 chr1 1399522 1402046 + processed_transcript NOVEL OTTHUMG00000002908.4 2525 2525 18 ENSG00000280133.1 RP4-789D17.3 chr1 35925832 35929610 + TEC KNOWN OTTHUMG00000175797.1 3779 3779 1 ENSG00000144868.12 TMEM108 chr3 133038391 133397792 + protein_coding KNOWN OTTHUMG00000159685.4 359402 8425 49 ENSG00000251011.4 TMEM108-AS1 chr3 133246106 133257188 - antisense NOVEL OTTHUMG00000159722.1 11083 2747 7 ENSG00000170819.4 BFSP2 chr3 133399995 133475222 + protein_coding KNOWN OTTHUMG00000159719.4 75228 2070 21 ENSG00000249820.1 RP11-503I22.2 chr3 133409955 133410843 + processed_pseudogene KNOWN OTTHUMG00000159708.1 889 889 1 ENSG00000249993.1 BFSP2-AS1 chr3 133429269 133455776 - antisense NOVEL OTTHUMG00000159721.1 26508 894 5 ENSG00000214301.4 RP11-91K8.4 chr3 133490824 133491505 + processed_pseudogene KNOWN OTTHUMG00000159763.1 682 682 1 ENSG00000272832.1 RP11-91K8.5 chr3 133543064 133543466 - lincRNA NOVEL OTTHUMG00000185977.1 403 403 1 ENSG00000250983.1 RP11-91K8.2 chr3 133546071 133546272 - processed_pseudogene KNOWN OTTHUMG00000159718.1 202 202 1 ENSG00000201827.1 SNORA33 chr3 133551186 133551315 + snoRNA NOVEL NA 130 130 1 ENSG00000091527.14 CDV3 chr3 133573730 133590261 + protein_coding KNOWN OTTHUMG00000159764.12 16532 4367 42 ENSG00000271914.1 RP4-789D17.5 chr1 35929720 35930115 - lincRNA NOVEL OTTHUMG00000185706.1 396 396 1 ENSG00000163781.11 TOPBP1 chr3 133598175 133661893 - protein_coding KNOWN OTTHUMG00000159773.4 63719 6515 60 ENSG00000242337.4 TFP1 chr3 133661998 133754576 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000159751.1 92579 2318 22 ENSG00000252641.2 RNU6-678P chr3 133664926 133665034 + snRNA KNOWN NA 109 109 1 ENSG00000201394.1 RNA5SP140 chr3 133710076 133710167 - rRNA KNOWN NA 92 92 1 ENSG00000091513.13 TF chr3 133745956 133779006 + protein_coding KNOWN OTTHUMG00000150356.2 33051 8565 69 ENSG00000244062.1 RP11-404G16.2 chr3 133760300 133762363 + processed_pseudogene KNOWN OTTHUMG00000159746.1 2064 1917 2 ENSG00000144867.10 SRPRB chr3 133784033 133825772 + protein_coding KNOWN OTTHUMG00000159753.2 41740 4180 26 ENSG00000154917.9 RAB6B chr3 133824239 133895836 - protein_coding KNOWN OTTHUMG00000159749.5 71598 6005 45 ENSG00000221972.3 C3orf36 chr3 133928145 133929812 - protein_coding KNOWN OTTHUMG00000187161.1 1668 1668 1 ENSG00000174640.11 SLCO2A1 chr3 133932696 134052184 - protein_coding KNOWN OTTHUMG00000159745.3 119489 5283 62 ENSG00000126070.17 AGO3 chr1 35930718 36072500 + protein_coding KNOWN OTTHUMG00000184172.3 141783 20938 54 ENSG00000243832.1 RP11-202A13.1 chr3 134055256 134057648 - lincRNA NOVEL OTTHUMG00000159748.1 2393 640 2 ENSG00000163785.11 RYK chr3 134065303 134250744 - protein_coding KNOWN OTTHUMG00000159750.4 185442 8047 72 ENSG00000231845.3 HMGB3P14 chr3 134170487 134171085 + processed_pseudogene KNOWN OTTHUMG00000159747.1 599 599 1 ENSG00000281921.1 AC096967.1 chr3 134261776 134261911 + miRNA NOVEL NA 136 136 1 ENSG00000240006.1 RP11-200A1.1 chr3 134313576 134321171 + lincRNA NOVEL OTTHUMG00000159760.1 7596 294 2 ENSG00000260633.1 RP11-375I20.6 chr3 134347288 134349233 - lincRNA NOVEL OTTHUMG00000175807.1 1946 1946 1 ENSG00000214289.2 RPL39P5 chr3 134351852 134356561 - transcribed_processed_pseudogene KNOWN OTTHUMG00000157377.3 4710 449 3 ENSG00000114019.13 AMOTL2 chr3 134355874 134375479 - protein_coding KNOWN OTTHUMG00000159777.6 19606 5984 67 ENSG00000277723.1 MIR6827 chr3 134367804 134367862 - miRNA KNOWN NA 59 59 1 ENSG00000248377.1 HMGN1P9 chr3 134385197 134385494 + processed_pseudogene KNOWN OTTHUMG00000159772.3 298 298 1 ENSG00000271554.1 RP4-665N4.8 chr1 35992109 36013630 - antisense NOVEL OTTHUMG00000184173.1 21522 659 5 ENSG00000221313.2 AC010207.1 chr3 134410044 134410140 - miRNA NOVEL NA 97 97 1 ENSG00000214288.4 HMGB3P13 chr3 134437605 134438211 + processed_pseudogene KNOWN OTTHUMG00000159770.1 607 607 1 ENSG00000263554.1 MIR4788 chr3 134437827 134437906 + miRNA KNOWN NA 80 80 1 ENSG00000129055.11 ANAPC13 chr3 134477706 134486716 - protein_coding KNOWN OTTHUMG00000159803.1 9011 2359 16 ENSG00000182923.15 CEP63 chr3 134485743 134575017 + protein_coding KNOWN OTTHUMG00000159725.4 89275 10116 129 ENSG00000249691.1 RP11-445J14.1 chr3 134510531 134511413 - processed_pseudogene KNOWN OTTHUMG00000159778.1 883 883 1 ENSG00000154928.15 EPHB1 chr3 134597801 135260467 + protein_coding KNOWN OTTHUMG00000159804.3 662667 6956 67 ENSG00000174611.10 KY chr3 134603138 134651636 - protein_coding KNOWN OTTHUMG00000159788.1 48499 5786 51 ENSG00000253087.1 RNU6-1174P chr3 134780527 134780627 - snRNA KNOWN NA 101 101 1 ENSG00000201413.1 RNA5SP141 chr3 134783436 134783555 - rRNA KNOWN NA 120 120 1 ENSG00000232862.4 RP4-665N4.4 chr1 36080066 36082322 - transcribed_processed_pseudogene KNOWN OTTHUMG00000008497.3 2257 1543 4 ENSG00000240086.4 RP11-657O9.1 chr3 135356067 135439888 - processed_transcript NOVEL OTTHUMG00000159842.1 83822 1364 11 ENSG00000242222.1 RP11-237P21.1 chr3 135925891 135926167 + processed_pseudogene KNOWN OTTHUMG00000159732.1 277 277 1 ENSG00000241905.1 RP11-305O4.1 chr3 135959275 135959590 - processed_pseudogene KNOWN OTTHUMG00000159765.1 316 316 1 ENSG00000073711.9 PPP2R3A chr3 135965673 136147891 + protein_coding KNOWN OTTHUMG00000159766.2 182219 7837 52 ENSG00000227267.3 RP11-305O4.2 chr3 136055184 136055764 + processed_pseudogene KNOWN OTTHUMG00000159767.1 581 581 1 ENSG00000273455.1 RP11-305O4.3 chr3 136087475 136087913 - antisense NOVEL OTTHUMG00000185979.1 439 439 1 ENSG00000174579.3 MSL2 chr3 136148922 136197241 - protein_coding KNOWN OTTHUMG00000159793.1 48320 5095 10 ENSG00000241438.1 TDGF1P6 chr3 136155549 136155996 + processed_pseudogene KNOWN OTTHUMG00000159794.1 448 448 1 ENSG00000244740.1 RP11-463H24.1 chr3 136205540 136205915 - processed_pseudogene KNOWN OTTHUMG00000157378.1 376 376 1 ENSG00000114054.12 PCCB chr3 136250306 136337896 + protein_coding KNOWN OTTHUMG00000159792.3 87591 7532 214 ENSG00000092850.10 TEKT2 chr1 36084075 36088275 + protein_coding KNOWN OTTHUMG00000007629.3 4201 1978 23 ENSG00000118007.11 STAG1 chr3 136336233 136752403 - protein_coding KNOWN OTTHUMG00000159798.3 416171 7846 216 ENSG00000200571.1 RNU6-1284P chr3 136430084 136430183 - snRNA KNOWN NA 100 100 1 ENSG00000280829.1 Y_RNA chr3 136588209 136588311 + misc_RNA NOVEL NA 103 103 1 ENSG00000244101.1 HMGN1P10 chr3 136609050 136609602 + processed_pseudogene KNOWN OTTHUMG00000159802.1 553 553 1 ENSG00000252914.1 RNU6-789P chr3 136721394 136721495 - snRNA KNOWN NA 102 102 1 ENSG00000240695.1 RP11-102M11.1 chr3 136736500 136737229 - processed_pseudogene KNOWN OTTHUMG00000159801.1 730 730 1 ENSG00000261758.1 RP11-102M11.2 chr3 136752630 136755780 + antisense NOVEL OTTHUMG00000175808.1 3151 3151 1 ENSG00000242968.1 RP11-731C17.1 chr3 136808551 136809623 - processed_pseudogene KNOWN OTTHUMG00000159791.1 1073 709 2 ENSG00000168917.8 SLC35G2 chr3 136818647 136855892 + protein_coding KNOWN OTTHUMG00000159787.1 37246 4287 6 ENSG00000273486.1 RP11-731C17.2 chr3 136837338 136839021 - antisense NOVEL OTTHUMG00000185980.1 1684 1684 1 ENSG00000116863.10 ADPRHL2 chr1 36088875 36093932 + protein_coding KNOWN OTTHUMG00000007628.2 5058 1668 6 ENSG00000239213.4 NCK1-AS1 chr3 136841726 136862054 - antisense NOVEL OTTHUMG00000159786.2 20329 1429 10 ENSG00000158092.5 NCK1 chr3 136862208 136949823 + protein_coding KNOWN OTTHUMG00000159781.7 87616 3727 39 ENSG00000214283.4 RAD51AP1P1 chr3 136899076 136900076 - processed_pseudogene KNOWN OTTHUMG00000159774.1 1001 1001 1 ENSG00000174564.11 IL20RB chr3 136946230 137011085 + protein_coding KNOWN OTTHUMG00000159779.2 64856 2473 29 ENSG00000249407.1 IL20RB-AS1 chr3 136959125 136982196 - antisense NOVEL OTTHUMG00000163091.1 23072 562 2 ENSG00000201325.1 RNA5SP142 chr3 137518134 137518255 - rRNA KNOWN NA 122 122 1 ENSG00000243886.1 RP11-575C1.1 chr3 137535572 137536142 - processed_pseudogene KNOWN OTTHUMG00000159710.1 571 571 1 ENSG00000242070.1 NPM1P17 chr3 137723774 137724543 + processed_pseudogene KNOWN OTTHUMG00000159756.2 770 602 2 ENSG00000168875.2 SOX14 chr3 137764284 137766338 + protein_coding KNOWN OTTHUMG00000159757.1 2055 2055 1 ENSG00000239513.4 LINC01210 chr3 137771949 137780878 + lincRNA NOVEL OTTHUMG00000159758.1 8930 1736 16 ENSG00000171812.9 COL8A2 chr1 36095236 36125220 - protein_coding KNOWN OTTHUMG00000007665.5 29985 4670 11 ENSG00000261146.1 RP11-2A4.4 chr3 137791973 137796678 + lincRNA NOVEL OTTHUMG00000175811.1 4706 4706 1 ENSG00000241478.1 HSPA8P9 chr3 137880295 137882237 + processed_pseudogene KNOWN OTTHUMG00000159761.1 1943 1943 1 ENSG00000066405.11 CLDN18 chr3 137998735 138033655 + protein_coding KNOWN OTTHUMG00000159762.3 34921 3880 14 ENSG00000272609.1 RP11-461M2.2 chr3 138004649 138005122 - antisense NOVEL OTTHUMG00000185981.2 474 474 1 ENSG00000158163.13 DZIP1L chr3 138061990 138115818 - protein_coding KNOWN OTTHUMG00000159819.1 53829 5045 53 ENSG00000240668.1 KRT8P36 chr3 138101478 138102917 - processed_pseudogene KNOWN OTTHUMG00000159822.1 1440 1440 1 ENSG00000281378.1 AC023049.1 chr3 138102085 138102222 + miRNA NOVEL NA 138 138 1 ENSG00000118017.3 A4GNT chr3 138123718 138132387 - protein_coding KNOWN OTTHUMG00000159820.1 8670 1771 3 ENSG00000138231.11 DBR1 chr3 138161012 138174949 - protein_coding KNOWN OTTHUMG00000159824.3 13938 3160 19 ENSG00000114098.16 ARMC8 chr3 138187248 138298389 + protein_coding KNOWN OTTHUMG00000159821.5 111142 9848 258 ENSG00000054116.10 TRAPPC3 chr1 36136570 36156053 - protein_coding KNOWN OTTHUMG00000007664.3 19484 3527 41 ENSG00000181322.12 NME9 chr3 138261437 138329886 - protein_coding KNOWN OTTHUMG00000159823.5 68450 3738 80 ENSG00000158186.11 MRAS chr3 138347648 138405534 + protein_coding KNOWN OTTHUMG00000159888.1 57887 6365 46 ENSG00000158220.12 ESYT3 chr3 138434586 138481686 + protein_coding KNOWN OTTHUMG00000147354.2 47101 9816 80 ENSG00000280399.1 RP11-80P20.3 chr3 138482065 138485755 + TEC KNOWN OTTHUMG00000175812.1 3691 3691 1 ENSG00000114107.7 CEP70 chr3 138494344 138594538 - protein_coding KNOWN OTTHUMG00000159891.4 100195 4420 133 ENSG00000158234.11 FAIM chr3 138608606 138633376 + protein_coding KNOWN OTTHUMG00000159885.1 24771 4072 42 ENSG00000174715.7 RP11-79L9.2 chr3 138643874 138644694 - processed_pseudogene KNOWN OTTHUMG00000159894.1 821 504 2 ENSG00000051382.7 PIK3CB chr3 138652699 138834938 - protein_coding KNOWN OTTHUMG00000159893.2 182240 7850 152 ENSG00000239207.2 GAPDHP39 chr3 138777832 138778810 + processed_pseudogene KNOWN OTTHUMG00000159890.2 979 979 1 ENSG00000242321.1 RPL23AP40 chr3 138796851 138797240 + processed_pseudogene KNOWN OTTHUMG00000157382.1 390 390 1 ENSG00000116871.14 MAP7D1 chr1 36155579 36180849 + protein_coding KNOWN OTTHUMG00000007714.4 25271 5271 98 ENSG00000241429.1 EEF1A1P25 chr3 138825063 138826329 + processed_pseudogene KNOWN OTTHUMG00000159887.1 1267 1267 1 ENSG00000242244.1 ATP5G1P3 chr3 138889255 138889957 - processed_pseudogene KNOWN OTTHUMG00000159895.1 703 410 2 ENSG00000244578.1 LINC01391 chr3 138935189 138944020 - lincRNA NOVEL OTTHUMG00000159892.1 8832 3889 8 ENSG00000183770.5 FOXL2 chr3 138944224 138947140 - protein_coding KNOWN OTTHUMG00000159889.1 2917 2917 1 ENSG00000206262.7 FOXL2NB chr3 138947234 138953451 + protein_coding KNOWN OTTHUMG00000159886.2 6218 4567 8 ENSG00000206260.3 PRR23A chr3 139005468 139006268 - protein_coding NOVEL OTTHUMG00000160635.1 801 801 1 ENSG00000175110.10 MRPS22 chr3 139005806 139357223 + protein_coding KNOWN OTTHUMG00000159910.2 351418 5382 81 ENSG00000184814.5 PRR23B chr3 139019031 139020926 - protein_coding KNOWN OTTHUMG00000160633.1 1896 1896 1 ENSG00000233701.3 PRR23C chr3 139042102 139044892 - protein_coding KNOWN OTTHUMG00000160634.1 2791 2791 1 ENSG00000251137.1 RPL7L1P7 chr3 139081654 139082377 - processed_pseudogene KNOWN OTTHUMG00000159953.1 724 724 1 ENSG00000242485.4 MRPL20 chr1 1401908 1407313 - protein_coding KNOWN OTTHUMG00000002916.3 5406 2788 19 ENSG00000264592.2 RN7SL131P chr1 36191915 36192170 + misc_RNA KNOWN NA 256 256 1 ENSG00000232416.3 BPESC1 chr3 139104185 139125171 + lincRNA KNOWN OTTHUMG00000141266.3 20987 3522 3 ENSG00000281473.1 PISRT1 chr3 139232992 139233522 + lincRNA KNOWN OTTHUMG00000189533.1 531 531 1 ENSG00000276304.1 PISRT1 chr3 139233414 139233520 + misc_RNA NOVEL NA 107 107 1 ENSG00000272656.1 RP11-219D15.3 chr3 139349024 139349371 - antisense NOVEL OTTHUMG00000185984.1 348 348 1 ENSG00000184432.8 COPB2 chr3 139355600 139389732 - protein_coding KNOWN OTTHUMG00000159959.3 34133 8177 97 ENSG00000248932.4 RP11-319G6.1 chr3 139389815 139583319 + antisense NOVEL OTTHUMG00000159955.1 193505 2120 22 ENSG00000114113.5 RBP2 chr3 139452884 139480747 - protein_coding KNOWN OTTHUMG00000159956.1 27864 845 11 ENSG00000248790.1 RP11-319G6.3 chr3 139466430 139466795 + antisense NOVEL OTTHUMG00000159957.1 366 273 2 ENSG00000178631.7 ACTG1P1 chr3 139493809 139494937 + processed_pseudogene KNOWN OTTHUMG00000150294.1 1129 1129 1 ENSG00000263538.1 AC097103.1 chr3 139494618 139494701 + miRNA NOVEL NA 84 84 1 ENSG00000054118.12 THRAP3 chr1 36224416 36305357 + protein_coding KNOWN OTTHUMG00000007866.4 80942 4736 34 ENSG00000114115.8 RBP1 chr3 139517434 139539829 - protein_coding KNOWN OTTHUMG00000155751.4 22396 3905 22 ENSG00000163864.13 NMNAT3 chr3 139560180 139678017 - protein_coding KNOWN OTTHUMG00000159951.2 117838 3451 66 ENSG00000214280.3 RP11-553K23.2 chr3 139582928 139583593 - processed_pseudogene KNOWN OTTHUMG00000159954.1 666 666 1 ENSG00000201600.1 RN7SKP124 chr3 139584105 139584445 - misc_RNA KNOWN NA 341 341 1 ENSG00000244692.3 RN7SL724P chr3 139609669 139609939 - misc_RNA KNOWN NA 271 271 1 ENSG00000261763.1 RP11-442N1.2 chr3 139678620 139682564 - lincRNA NOVEL OTTHUMG00000175813.1 3945 3945 1 ENSG00000250543.1 RP11-442N1.1 chr3 139688403 139689342 - lincRNA NOVEL OTTHUMG00000159958.1 940 607 2 ENSG00000251471.1 RP11-166D18.1 chr3 139837220 139859894 + lincRNA NOVEL OTTHUMG00000159952.1 22675 539 3 ENSG00000250161.1 TRMT112P5 chr3 139845078 139845411 - processed_pseudogene KNOWN OTTHUMG00000159950.1 334 334 1 ENSG00000158258.14 CLSTN2 chr3 139935185 140577397 + protein_coding KNOWN OTTHUMG00000160139.5 642213 14636 45 ENSG00000231849.1 UBE2V2P4 chr1 36241898 36242156 - processed_pseudogene KNOWN OTTHUMG00000007715.1 259 259 1 ENSG00000249290.4 RP11-68L1.2 chr3 140449435 140460351 - antisense NOVEL OTTHUMG00000160163.1 10917 1059 15 ENSG00000251058.1 RP11-68L1.1 chr3 140461000 140462825 - antisense NOVEL OTTHUMG00000160141.1 1826 482 2 ENSG00000216184.1 AC048346.1 chr3 140490052 140490144 - miRNA NOVEL NA 93 93 1 ENSG00000250433.1 CLSTN2-AS1 chr3 140505611 140508789 - antisense NOVEL OTTHUMG00000160140.1 3179 2693 2 ENSG00000249305.1 RP11-13L2.1 chr3 140619694 140619837 - processed_pseudogene KNOWN OTTHUMG00000160138.1 144 144 1 ENSG00000155890.3 TRIM42 chr3 140678039 140701150 + protein_coding KNOWN OTTHUMG00000160170.2 23112 2539 5 ENSG00000261826.1 RP11-691G17.1 chr3 140865075 140867783 - lincRNA NOVEL OTTHUMG00000175815.1 2709 2709 1 ENSG00000224085.3 RP11-4H14.1 chr3 140902194 140902651 + processed_pseudogene KNOWN OTTHUMG00000157383.1 458 458 1 ENSG00000114120.10 SLC25A36 chr3 140941830 140979933 + protein_coding KNOWN OTTHUMG00000160260.1 38104 9229 68 ENSG00000248773.1 RP11-231L11.3 chr3 140972744 140973255 + sense_intronic NOVEL OTTHUMG00000160261.1 512 393 2 ENSG00000278491.1 AL360074.1 chr1 36256467 36256559 + miRNA NOVEL NA 93 93 1 ENSG00000175093.4 SPSB4 chr3 141051402 141148611 + protein_coding KNOWN OTTHUMG00000160223.1 97210 3740 11 ENSG00000251270.1 RP11-231L11.1 chr3 141115124 141124182 - antisense NOVEL OTTHUMG00000160222.1 9059 392 3 ENSG00000155893.10 PXYLP1 chr3 141228726 141294906 + protein_coding KNOWN OTTHUMG00000160171.3 66181 7052 72 ENSG00000241400.1 RP11-764I5.1 chr3 141258418 141258779 + processed_pseudogene KNOWN OTTHUMG00000157384.1 362 362 1 ENSG00000249417.1 RP11-438D8.2 chr3 141267353 141367137 - antisense NOVEL OTTHUMG00000160129.2 99785 422 3 ENSG00000249540.1 RP11-789L4.1 chr3 141307612 141307933 - processed_pseudogene KNOWN OTTHUMG00000160144.2 322 322 1 ENSG00000177311.9 ZBTB38 chr3 141324213 141449792 + protein_coding KNOWN OTTHUMG00000160128.2 125580 13706 69 ENSG00000215606.4 KRT18P35 chr3 141470634 141471902 - processed_pseudogene KNOWN OTTHUMG00000160143.1 1269 1269 1 ENSG00000155903.10 RASA2 chr3 141487047 141615342 + protein_coding KNOWN OTTHUMG00000160221.3 128296 5993 78 ENSG00000280530.1 AC010184.1 chr3 141487181 141487424 - protein_coding NOVEL NA 244 69 2 ENSG00000214193.8 SH3D21 chr1 36306387 36324886 + protein_coding KNOWN OTTHUMG00000007868.6 18500 4474 66 ENSG00000250170.1 RASA2-IT1 chr3 141525133 141526121 + sense_intronic NOVEL OTTHUMG00000160224.1 989 612 2 ENSG00000249986.1 YWHAQP6 chr3 141600276 141600579 - processed_pseudogene KNOWN OTTHUMG00000160145.1 304 304 1 ENSG00000242104.3 RP11-340E6.1 chr3 141663199 141721073 + lincRNA NOVEL OTTHUMG00000159357.3 57875 976 8 ENSG00000241899.1 TPT1P3 chr3 141709016 141709832 - processed_pseudogene KNOWN OTTHUMG00000159356.1 817 512 2 ENSG00000241526.1 RP11-144C9.1 chr3 141724425 141724526 + processed_pseudogene KNOWN OTTHUMG00000159053.2 102 102 1 ENSG00000114125.12 RNF7 chr3 141738204 141747560 + protein_coding KNOWN OTTHUMG00000141305.3 9357 3147 20 ENSG00000114124.2 GRK7 chr3 141778148 141818490 + protein_coding KNOWN OTTHUMG00000159068.1 40343 3239 4 ENSG00000265391.1 AC112504.1 chr3 141787911 141788009 + miRNA NOVEL NA 99 99 1 ENSG00000228398.3 HMGN2P25 chr3 141865012 141865279 - processed_pseudogene KNOWN OTTHUMG00000159069.1 268 268 1 ENSG00000069849.9 ATP1B3 chr3 141876124 141926514 + protein_coding KNOWN OTTHUMG00000159081.4 50391 2584 52 ENSG00000142694.6 EVA1B chr1 36322031 36324154 - protein_coding KNOWN OTTHUMG00000007867.1 2124 1211 6 ENSG00000200389.1 RNU6-509P chr3 141902924 141903030 - snRNA KNOWN NA 107 107 1 ENSG00000244124.1 ATP1B3-AS1 chr3 141918252 141919021 - antisense NOVEL OTTHUMG00000159102.1 770 376 2 ENSG00000279147.1 RP11-271K21.12 chr3 141936707 141938547 - TEC KNOWN OTTHUMG00000185988.1 1841 1841 1 ENSG00000114126.16 TFDP2 chr3 141944428 142149544 - protein_coding KNOWN OTTHUMG00000164975.3 205117 11897 161 ENSG00000233597.3 RP11-343B5.1 chr3 142043623 142044198 - processed_pseudogene KNOWN OTTHUMG00000157387.1 576 576 1 ENSG00000206604.1 RNU6-425P chr3 142145454 142145555 + snRNA KNOWN NA 102 102 1 ENSG00000175066.14 GK5 chr3 142157527 142225607 - protein_coding KNOWN OTTHUMG00000133572.5 68081 12158 98 ENSG00000114127.9 XRN1 chr3 142306607 142448062 - protein_coding KNOWN OTTHUMG00000159251.4 141456 11982 184 ENSG00000251804.1 RNU6-1294P chr3 142407657 142407737 - snRNA KNOWN NA 81 81 1 ENSG00000202125.1 RNU1-100P chr3 142420205 142420369 - snRNA KNOWN NA 165 165 1 ENSG00000116883.8 RP11-268J15.5 chr1 36323734 36329221 + antisense NOVEL OTTHUMG00000184623.1 5488 1838 2 ENSG00000175054.13 ATR chr3 142449235 142578826 - protein_coding KNOWN OTTHUMG00000159234.20 129592 12496 87 ENSG00000242479.1 RP11-383G6.4 chr3 142450102 142452149 + processed_pseudogene KNOWN OTTHUMG00000159253.1 2048 2048 1 ENSG00000244327.1 RP11-383G6.3 chr3 142465315 142472337 - sense_overlapping NOVEL OTTHUMG00000159252.1 7023 765 2 ENSG00000242390.1 RPL6P9 chr3 142580910 142582399 + processed_pseudogene KNOWN OTTHUMG00000157389.1 1490 859 3 ENSG00000252745.1 RNA5SP143 chr3 142591677 142591791 - rRNA KNOWN NA 115 115 1 ENSG00000120756.11 PLS1 chr3 142596387 142713664 + protein_coding KNOWN OTTHUMG00000159292.3 117278 5294 91 ENSG00000239641.1 PLS1-AS1 chr3 142654784 142656745 - antisense NOVEL OTTHUMG00000159291.1 1962 346 2 ENSG00000199319.1 RN7SKP25 chr3 142673597 142673904 + misc_RNA KNOWN NA 308 308 1 ENSG00000144935.13 TRPC1 chr3 142724074 142807888 + protein_coding KNOWN OTTHUMG00000159301.2 83815 4768 43 ENSG00000251787.1 RNU7-47P chr3 142801207 142801268 + snRNA KNOWN NA 62 62 1 ENSG00000196182.9 STK40 chr1 36339624 36385896 - protein_coding KNOWN OTTHUMG00000008238.4 46273 5590 62 ENSG00000163710.6 PCOLCE2 chr3 142815922 142889203 - protein_coding KNOWN OTTHUMG00000159312.1 73282 3480 49 ENSG00000240950.1 RP11-372E1.1 chr3 142827096 142827728 - processed_pseudogene KNOWN OTTHUMG00000157390.1 633 633 1 ENSG00000243818.4 RP11-372E1.4 chr3 142926675 142942534 + antisense NOVEL OTTHUMG00000159310.3 15860 2060 7 ENSG00000188582.7 PAQR9 chr3 142949164 142963682 - protein_coding KNOWN OTTHUMG00000159313.2 14519 4169 7 ENSG00000241592.1 RP11-372E1.7 chr3 142960372 142960543 + processed_pseudogene KNOWN OTTHUMG00000159315.1 172 172 1 ENSG00000241570.7 PAQR9-AS1 chr3 142960650 143001559 + antisense NOVEL OTTHUMG00000159316.4 40910 4421 44 ENSG00000163714.16 U2SURP chr3 142964497 143060546 + protein_coding KNOWN OTTHUMG00000159323.17 96050 11118 200 ENSG00000268129.1 RP11-91G21.1 chr3 143000907 143001467 - lincRNA NOVEL OTTHUMG00000182515.1 561 561 1 ENSG00000243733.1 RP11-80H8.3 chr3 143111802 143112359 + lincRNA NOVEL OTTHUMG00000159353.1 558 368 2 ENSG00000175040.5 CHST2 chr3 143119331 143124014 + protein_coding KNOWN OTTHUMG00000159351.2 4684 4582 2 ENSG00000181817.5 LSM10 chr1 36391238 36397892 - protein_coding KNOWN OTTHUMG00000008140.1 6655 1496 8 ENSG00000241679.2 RP11-80H8.4 chr3 143123362 143131893 + processed_transcript NOVEL OTTHUMG00000159352.1 8532 746 4 ENSG00000211483.2 AC018450.1 chr3 143165648 143165737 + miRNA NOVEL NA 90 90 1 ENSG00000244171.4 PBX2P1 chr3 143176327 143177617 + processed_pseudogene KNOWN OTTHUMG00000159350.2 1291 1291 1 ENSG00000181804.13 SLC9A9 chr3 143265222 143848531 - protein_coding KNOWN OTTHUMG00000159373.2 583310 4087 31 ENSG00000240888.1 RP13-635I23.3 chr3 143313067 143314429 - sense_intronic NOVEL OTTHUMG00000159376.1 1363 441 2 ENSG00000240012.1 SLC9A9-AS1 chr3 143342246 143347071 + antisense NOVEL OTTHUMG00000159374.1 4826 518 4 ENSG00000244493.1 SLC9A9-AS2 chr3 143381338 143382161 + antisense NOVEL OTTHUMG00000159375.1 824 327 2 ENSG00000243033.2 GAPDHP47 chr3 143503275 143504273 - processed_pseudogene KNOWN OTTHUMG00000159382.2 999 999 1 ENSG00000243759.1 ST13P15 chr3 143517123 143518229 - processed_pseudogene KNOWN OTTHUMG00000159381.1 1107 1107 1 ENSG00000248374.1 RP11-501M7.1 chr3 143620528 143627690 + unprocessed_pseudogene KNOWN OTTHUMG00000159372.1 7163 684 3 ENSG00000222821.1 RNU4-27P chr1 36402721 36402859 - snRNA KNOWN NA 139 139 1 ENSG00000235110.5 RP11-8J23.1 chr3 143855739 143856142 - processed_pseudogene KNOWN OTTHUMG00000157391.1 404 404 1 ENSG00000181744.7 C3orf58 chr3 143971798 144048719 + protein_coding KNOWN OTTHUMG00000159380.5 76922 5487 20 ENSG00000222778.1 RNA5SP144 chr3 144186905 144187020 - rRNA KNOWN NA 116 116 1 ENSG00000280397.1 RP11-42F12.1 chr3 144442211 144445844 - TEC KNOWN OTTHUMG00000175816.1 3634 3634 1 ENSG00000244024.1 LARP7P4 chr3 145523538 145524415 + processed_pseudogene KNOWN OTTHUMG00000159390.1 878 878 1 ENSG00000241695.1 GM2AP1 chr3 145684572 145685092 + processed_pseudogene KNOWN OTTHUMG00000159389.1 521 521 1 ENSG00000239797.1 RPL21P39 chr3 145824257 145824739 - processed_pseudogene KNOWN OTTHUMG00000157392.1 483 483 1 ENSG00000273810.1 AC055758.1 chr3 145897286 145897374 + miRNA NOVEL NA 89 89 1 ENSG00000244358.1 RP11-88H10.2 chr3 145939912 145961536 + lincRNA NOVEL OTTHUMG00000159391.1 21625 1118 6 ENSG00000240095.1 RP11-88H10.3 chr3 145961755 145963623 + lincRNA NOVEL OTTHUMG00000159392.1 1869 569 2 ENSG00000264293.2 RN7SL657P chr1 1405460 1405752 - misc_RNA KNOWN NA 293 293 1 ENSG00000116885.17 OSCP1 chr1 36415827 36450451 - protein_coding KNOWN OTTHUMG00000008139.6 34625 2788 69 ENSG00000261051.1 RP11-274H2.5 chr3 146059585 146061679 - sense_overlapping NOVEL OTTHUMG00000175832.1 2095 2095 1 ENSG00000243415.2 RP11-274H2.2 chr3 146064042 146105204 + antisense NOVEL OTTHUMG00000159414.3 41163 807 8 ENSG00000240032.1 RP11-274H2.3 chr3 146066344 146069185 - antisense NOVEL OTTHUMG00000159416.1 2842 709 2 ENSG00000152952.10 PLOD2 chr3 146069440 146163653 - protein_coding KNOWN OTTHUMG00000159417.1 94214 7646 93 ENSG00000114698.13 PLSCR4 chr3 146192339 146251179 - protein_coding KNOWN OTTHUMG00000159415.13 58841 4227 76 ENSG00000243596.1 RP11-758I14.2 chr3 146342996 146348480 - processed_pseudogene KNOWN OTTHUMG00000159428.1 5485 433 3 ENSG00000241358.1 RP11-758I14.3 chr3 146391363 146416603 - transcribed_processed_pseudogene KNOWN OTTHUMG00000159430.1 25241 914 9 ENSG00000163746.10 PLSCR2 chr3 146391421 146495991 - protein_coding KNOWN OTTHUMG00000159429.13 104571 2557 45 ENSG00000279320.1 RP11-329N15.3 chr3 146504570 146506560 - TEC KNOWN OTTHUMG00000175835.1 1991 1991 1 ENSG00000188313.11 PLSCR1 chr3 146515180 146544864 - protein_coding KNOWN OTTHUMG00000159427.3 29685 4340 118 ENSG00000201448.1 SNORA63 chr1 36418450 36418578 - snoRNA NOVEL NA 129 129 1 ENSG00000199812.1 RNU6-428P chr3 146571477 146571583 + snRNA KNOWN NA 107 107 1 ENSG00000231213.5 PLSCR5 chr3 146576555 146606216 - protein_coding KNOWN OTTHUMG00000159437.1 29662 2140 24 ENSG00000241457.1 PLSCR5-AS1 chr3 146589602 146590325 + antisense NOVEL OTTHUMG00000159436.1 724 450 2 ENSG00000243620.1 RP11-649A16.1 chr3 146909685 147370656 - antisense NOVEL OTTHUMG00000159458.1 460972 570 6 ENSG00000242671.1 RP11-232M24.1 chr3 146921923 146925218 + lincRNA NOVEL OTTHUMG00000159455.1 3296 1893 5 ENSG00000207156.1 RNU6-505P chr3 146996607 146996713 - snRNA KNOWN NA 107 107 1 ENSG00000239412.1 RPL21P71 chr3 147276768 147277252 + processed_pseudogene KNOWN OTTHUMG00000157393.1 485 459 2 ENSG00000174963.16 ZIC4 chr3 147386046 147406860 - protein_coding KNOWN OTTHUMG00000037281.7 20815 8568 60 ENSG00000241202.1 ZIC4-AS1 chr3 147386967 147387453 + antisense NOVEL OTTHUMG00000159453.1 487 268 2 ENSG00000152977.8 ZIC1 chr3 147393422 147510293 + protein_coding KNOWN OTTHUMG00000159456.1 116872 6806 13 ENSG00000116898.10 MRPS15 chr1 36455718 36464437 - protein_coding KNOWN OTTHUMG00000008042.4 8720 2916 17 ENSG00000240804.1 NPM1P28 chr3 147590996 147591835 - processed_pseudogene KNOWN OTTHUMG00000159461.1 840 840 1 ENSG00000239661.1 RP11-78O22.1 chr3 147844123 147846657 - lincRNA NOVEL OTTHUMG00000159462.1 2535 493 3 ENSG00000221431.1 AC092925.1 chr3 147911406 147911501 - miRNA NOVEL NA 96 96 1 ENSG00000239922.1 RP11-71N10.1 chr3 147940004 148006755 + lincRNA NOVEL OTTHUMG00000159460.2 66752 2835 6 ENSG00000241131.1 RP11-639B1.1 chr3 148078159 148088029 + lincRNA NOVEL OTTHUMG00000159502.1 9871 391 2 ENSG00000221457.2 AC092958.1 chr3 148080833 148080922 - miRNA NOVEL NA 90 90 1 ENSG00000241792.1 RP11-501O2.1 chr3 148093175 148127233 + lincRNA NOVEL OTTHUMG00000159498.1 34059 492 4 ENSG00000244650.2 RP11-501O2.3 chr3 148160911 148226606 + lincRNA NOVEL OTTHUMG00000159500.2 65696 604 6 ENSG00000205412.5 HNRNPA1P20 chr3 148166344 148167298 - processed_pseudogene KNOWN OTTHUMG00000159499.1 955 955 1 ENSG00000243347.1 RP11-501O2.4 chr3 148195729 148280098 - lincRNA NOVEL OTTHUMG00000159504.1 84370 679 5 ENSG00000119535.16 CSF3R chr1 36466043 36483278 - protein_coding KNOWN OTTHUMG00000008010.5 17236 8429 137 ENSG00000242440.1 RP11-501O2.5 chr3 148280891 148399956 + lincRNA NOVEL OTTHUMG00000159505.1 119066 754 6 ENSG00000241993.1 RPL38P1 chr3 148695994 148696204 - processed_pseudogene KNOWN OTTHUMG00000157394.1 211 211 1 ENSG00000144891.16 AGTR1 chr3 148697784 148743008 + protein_coding KNOWN OTTHUMG00000159503.1 45225 3478 24 ENSG00000153002.10 CPB1 chr3 148791102 148860187 + protein_coding KNOWN OTTHUMG00000159520.1 69086 5703 55 ENSG00000244089.1 HMGB1P30 chr3 148824782 148825387 - processed_pseudogene KNOWN OTTHUMG00000159519.1 606 606 1 ENSG00000240521.1 RP11-680B3.2 chr3 148850933 148960112 - antisense NOVEL OTTHUMG00000159518.1 109180 1414 5 ENSG00000163751.3 CPA3 chr3 148865256 148897196 + protein_coding KNOWN OTTHUMG00000159526.1 31941 1848 16 ENSG00000241627.3 UBQLN4P1 chr3 148985868 148987668 - processed_pseudogene KNOWN OTTHUMG00000159532.2 1801 1801 1 ENSG00000163754.16 GYG1 chr3 148991341 149027668 + protein_coding KNOWN OTTHUMG00000159533.20 36328 3511 66 ENSG00000071794.14 HLTF chr3 149030127 149086554 - protein_coding KNOWN OTTHUMG00000159534.3 56428 6024 127 ENSG00000230214.1 FTLP18 chr1 36630335 36630857 + processed_pseudogene KNOWN OTTHUMG00000004186.1 523 523 1 ENSG00000239718.1 HLTF-AS1 chr3 149086332 149102823 + antisense NOVEL OTTHUMG00000159531.2 16492 415 3 ENSG00000201031.1 Y_RNA chr3 149094353 149094462 - misc_RNA NOVEL NA 110 110 1 ENSG00000240511.1 MED28P2 chr3 149099499 149099815 - processed_pseudogene KNOWN OTTHUMG00000159549.1 317 317 1 ENSG00000163755.7 HPS3 chr3 149129584 149173732 + protein_coding KNOWN OTTHUMG00000159548.1 44149 6256 59 ENSG00000047457.12 CP chr3 149162410 149222055 - protein_coding KNOWN OTTHUMG00000159563.4 59646 7296 113 ENSG00000240216.6 CPHL1P chr3 149229356 149291800 - unitary_pseudogene KNOWN OTTHUMG00000159584.4 62445 3934 31 ENSG00000244468.1 RP11-206M11.7 chr3 149284782 149333653 + antisense NOVEL OTTHUMG00000159583.1 48872 551 2 ENSG00000163762.5 TM4SF18 chr3 149318498 149334414 - protein_coding KNOWN OTTHUMG00000159582.1 15917 4482 23 ENSG00000243822.1 RP11-2G17.1 chr3 149357169 149357545 - processed_pseudogene KNOWN OTTHUMG00000157396.1 377 377 1 ENSG00000169908.9 TM4SF1 chr3 149369022 149377865 - protein_coding KNOWN OTTHUMG00000159597.1 8844 3668 20 ENSG00000281218.1 AL080286.1 chr1 36630807 36630885 - miRNA NOVEL NA 79 79 1 ENSG00000240541.2 TM4SF1-AS1 chr3 149377778 149386583 + antisense NOVEL OTTHUMG00000159596.1 8806 931 5 ENSG00000243885.1 RP11-278L15.2 chr3 149384179 149385800 - lincRNA NOVEL OTTHUMG00000159595.1 1622 1001 2 ENSG00000240246.1 RP11-167H9.1 chr3 149433044 149433274 - processed_pseudogene KNOWN OTTHUMG00000157413.1 231 231 1 ENSG00000241929.1 RP11-278L15.3 chr3 149462182 149464830 - processed_pseudogene KNOWN OTTHUMG00000159613.1 2649 1020 2 ENSG00000239408.1 RP11-278L15.4 chr3 149464839 149465201 - processed_pseudogene KNOWN OTTHUMG00000159621.1 363 363 1 ENSG00000169903.6 TM4SF4 chr3 149473974 149503281 + protein_coding KNOWN OTTHUMG00000159619.1 29308 2140 10 ENSG00000244503.1 RP11-278L15.6 chr3 149494660 149495995 + processed_pseudogene KNOWN OTTHUMG00000159617.1 1336 1336 1 ENSG00000018408.13 WWTR1 chr3 149517235 149736714 - protein_coding KNOWN OTTHUMG00000159614.11 219480 8413 55 ENSG00000252581.1 RNU6-1098P chr3 149525631 149525726 + snRNA KNOWN NA 96 96 1 ENSG00000241985.1 WWTR1-IT1 chr3 149648997 149650184 - sense_intronic NOVEL OTTHUMG00000159620.1 1188 451 2 ENSG00000234481.1 RP4-614N24.1 chr1 36773140 36775768 + antisense NOVEL OTTHUMG00000004187.1 2629 463 2 ENSG00000241313.2 WWTR1-AS1 chr3 149657020 149661364 + antisense NOVEL OTTHUMG00000159618.1 4345 2603 7 ENSG00000114744.7 COMMD2 chr3 149738470 149752499 - protein_coding KNOWN OTTHUMG00000159616.2 14030 4901 28 ENSG00000206199.8 ANKUB1 chr3 149761105 149968385 - protein_coding KNOWN OTTHUMG00000159615.5 207281 6539 33 ENSG00000281611.1 AC069216.1 chr3 149766814 149766883 + miRNA NOVEL NA 70 70 1 ENSG00000251854.1 RNU6-507P chr3 149779009 149779108 - snRNA KNOWN NA 100 100 1 ENSG00000082996.18 RNF13 chr3 149812708 149962139 + protein_coding KNOWN OTTHUMG00000150338.6 149432 3635 109 ENSG00000252172.1 RNU6-720P chr3 149917342 149917449 - snRNA KNOWN NA 108 108 1 ENSG00000239351.1 NPM1P29 chr3 149938997 149939799 - processed_pseudogene KNOWN OTTHUMG00000159734.1 803 803 1 ENSG00000070087.12 PFN2 chr3 149964904 150050788 - protein_coding KNOWN OTTHUMG00000159683.3 85885 3440 49 ENSG00000242791.2 RP11-651P23.5 chr3 149976755 149979355 + lincRNA NOVEL OTTHUMG00000159743.1 2601 721 5 ENSG00000163873.8 GRIK3 chr1 36795527 37034129 - protein_coding KNOWN OTTHUMG00000004189.1 238603 10111 37 ENSG00000224831.3 RP11-651P23.4 chr3 149982181 149983308 - processed_pseudogene KNOWN OTTHUMG00000159739.1 1128 1128 1 ENSG00000182000.9 RP11-651P23.2 chr3 149984395 149984797 + processed_pseudogene KNOWN OTTHUMG00000159684.1 403 403 1 ENSG00000241947.1 HNRNPA1P24 chr3 149999645 150000690 + processed_pseudogene KNOWN OTTHUMG00000159736.1 1046 1046 1 ENSG00000243944.4 RP11-167H9.4 chr3 150039214 150213726 + antisense NOVEL OTTHUMG00000159742.1 174513 1032 9 ENSG00000240477.1 RP11-63E16.1 chr3 150050729 150051456 + processed_pseudogene KNOWN OTTHUMG00000159741.1 728 728 1 ENSG00000243321.3 RP11-167H9.3 chr3 150077494 150080117 - lincRNA NOVEL OTTHUMG00000159740.1 2624 1967 2 ENSG00000241143.1 RPL32P9 chr3 150150538 150150944 + transcribed_processed_pseudogene KNOWN OTTHUMG00000157414.1 407 407 1 ENSG00000241048.1 RP11-167H9.5 chr3 150202174 150225190 - lincRNA NOVEL OTTHUMG00000159738.1 23017 606 6 ENSG00000244541.4 LINC01213 chr3 150238519 150240209 + lincRNA NOVEL OTTHUMG00000159737.1 1691 609 6 ENSG00000278234.1 U2 chr3 150241777 150241860 + snRNA NOVEL NA 84 84 1 ENSG00000280570.1 AC117945.1 chr1 36909316 36909416 - miRNA NOVEL NA 101 101 1 ENSG00000243550.2 LINC01214 chr3 150265412 150287373 - lincRNA NOVEL OTTHUMG00000159735.2 21962 335 3 ENSG00000196428.11 TSC22D2 chr3 150408335 150466431 + protein_coding KNOWN OTTHUMG00000159744.2 58097 11676 18 ENSG00000120742.9 SERP1 chr3 150541994 150603228 - protein_coding KNOWN OTTHUMG00000159769.2 61235 5747 21 ENSG00000144895.10 EIF2A chr3 150546678 150584242 + protein_coding KNOWN OTTHUMG00000159775.2 37565 4131 129 ENSG00000198843.11 SELT chr3 150602875 150630445 + protein_coding KNOWN OTTHUMG00000159825.2 27571 4135 41 ENSG00000271711.1 RP11-392O18.2 chr3 150611262 150611877 - processed_pseudogene KNOWN OTTHUMG00000184356.1 616 616 1 ENSG00000163645.13 ERICH6 chr3 150659885 150703971 - protein_coding KNOWN OTTHUMG00000133569.3 44087 2075 45 ENSG00000240137.4 ERICH6-AS1 chr3 150703564 150720146 + antisense NOVEL OTTHUMG00000159845.1 16583 827 10 ENSG00000244668.1 SNRPCP3 chr3 150719997 150720836 - processed_pseudogene KNOWN OTTHUMG00000159850.1 840 476 2 ENSG00000181788.3 SIAH2 chr3 150741127 150763477 - protein_coding KNOWN OTTHUMG00000159847.1 22351 2617 7 ENSG00000264698.1 MIR4255 chr1 37161563 37161634 + miRNA KNOWN NA 72 72 1 ENSG00000244265.1 SIAH2-AS1 chr3 150761937 150762538 + antisense NOVEL OTTHUMG00000159851.1 602 441 2 ENSG00000280141.1 AC016142.1 chr3 150819598 150819972 + protein_coding KNOWN NA 375 375 1 ENSG00000239265.4 CLRN1-AS1 chr3 150852484 151080726 + antisense KNOWN OTTHUMG00000159846.2 228243 3064 11 ENSG00000214237.8 RP11-166N6.1 chr3 150871045 150891060 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000159843.4 20016 819 14 ENSG00000260234.4 RP11-166N6.3 chr3 150882997 150941743 - protein_coding NOVEL OTTHUMG00000175578.1 58747 1329 21 ENSG00000243273.1 RP11-166N6.2 chr3 150890636 151038818 + antisense NOVEL OTTHUMG00000159849.1 148183 565 3 ENSG00000244382.1 RP11-373I8.1 chr3 150901154 150903394 - lincRNA NOVEL OTTHUMG00000159848.1 2241 449 2 ENSG00000163646.9 CLRN1 chr3 150926163 150972999 - protein_coding KNOWN OTTHUMG00000140368.5 46837 3472 21 ENSG00000281338.1 AC020636.1 chr3 151024046 151024181 + miRNA NOVEL NA 136 136 1 ENSG00000276055.1 CLRN1-AS1 chr3 151079506 151079584 + misc_RNA NOVEL NA 79 79 1 ENSG00000272455.1 RP4-758J18.13 chr1 1409096 1410618 + lincRNA NOVEL OTTHUMG00000185586.1 1523 1523 1 ENSG00000207328.1 RNU6-636P chr1 37203610 37203716 + snRNA KNOWN NA 107 107 1 ENSG00000144893.11 MED12L chr3 151085697 151437072 + protein_coding KNOWN OTTHUMG00000159844.4 351376 12619 126 ENSG00000199994.1 RNA5SP145 chr3 151188099 151188223 + rRNA KNOWN NA 125 125 1 ENSG00000174946.6 GPR171 chr3 151197832 151203201 - protein_coding KNOWN OTTHUMG00000159861.1 5370 1795 6 ENSG00000174944.7 P2RY14 chr3 151212117 151278467 - protein_coding KNOWN OTTHUMG00000159859.1 66351 2815 10 ENSG00000264327.2 AC078816.1 chr3 151235948 151236036 + miRNA NOVEL NA 89 89 1 ENSG00000239570.1 SETP11 chr3 151269440 151270129 + processed_pseudogene KNOWN OTTHUMG00000159860.1 690 690 1 ENSG00000138271.5 GPR87 chr3 151294086 151316952 - protein_coding KNOWN OTTHUMG00000159858.2 22867 1698 4 ENSG00000181631.6 P2RY13 chr3 151326312 151329548 - protein_coding KNOWN OTTHUMG00000155745.1 3237 2764 2 ENSG00000169313.9 P2RY12 chr3 151337380 151384812 - protein_coding KNOWN OTTHUMG00000159863.1 47433 1859 5 ENSG00000152580.8 IGSF10 chr3 151425384 151458709 - protein_coding KNOWN OTTHUMG00000159856.1 33326 11727 14 ENSG00000223944.1 RP5-1180C18.1 chr1 37262739 37325100 - lincRNA NOVEL OTTHUMG00000004188.1 62362 596 4 ENSG00000242810.1 MRPL42P6 chr3 151475804 151476174 - processed_pseudogene KNOWN OTTHUMG00000159862.1 371 371 1 ENSG00000242119.1 RP11-312P21.2 chr3 151499639 151499806 + processed_pseudogene KNOWN OTTHUMG00000159857.1 168 168 1 ENSG00000264330.1 MIR5186 chr3 151565876 151565995 - miRNA KNOWN NA 120 120 1 ENSG00000222833.1 AC069067.1 chr3 151634350 151634463 + miRNA NOVEL NA 114 114 1 ENSG00000241151.1 RP11-454C18.1 chr3 151637174 151657966 + lincRNA NOVEL OTTHUMG00000159875.1 20793 580 3 ENSG00000197953.5 AADACL2 chr3 151733916 151761339 + protein_coding KNOWN OTTHUMG00000155914.4 27424 5071 9 ENSG00000242908.5 AADACL2-AS1 chr3 151751443 151928175 - antisense NOVEL OTTHUMG00000159877.2 176733 635 9 ENSG00000242097.1 RP11-64D22.1 chr3 151759747 151762011 - processed_pseudogene KNOWN OTTHUMG00000159878.1 2265 2265 1 ENSG00000240602.6 AADACP1 chr3 151770428 151784894 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000159879.2 14467 2012 17 ENSG00000250271.1 RP11-64D22.5 chr3 151797484 151808249 + lincRNA NOVEL OTTHUMG00000162581.1 10766 390 3 ENSG00000252368.1 RNA5SP43 chr1 37264677 37264786 - rRNA KNOWN NA 110 110 1 ENSG00000114771.12 AADAC chr3 151814037 151828488 + protein_coding KNOWN OTTHUMG00000159876.2 14452 1668 9 ENSG00000198829.6 SUCNR1 chr3 151873643 151884619 + protein_coding KNOWN OTTHUMG00000159880.3 10977 4181 3 ENSG00000239941.1 RP11-246A10.1 chr3 152118173 152151724 - lincRNA NOVEL OTTHUMG00000159881.1 33552 554 2 ENSG00000152601.16 MBNL1 chr3 152243828 152465780 + protein_coding KNOWN OTTHUMG00000159163.3 221953 9989 158 ENSG00000229619.3 MBNL1-AS1 chr3 152262616 152269555 - antisense KNOWN OTTHUMG00000186506.1 6940 6585 4 ENSG00000221962.4 TMEM14E chr3 152340527 152340904 - protein_coding KNOWN OTTHUMG00000159652.1 378 378 1 ENSG00000201217.1 Y_RNA chr3 152449272 152449384 + misc_RNA NOVEL NA 113 113 1 ENSG00000243305.1 RP11-362A9.3 chr3 152457759 152496813 - antisense NOVEL OTTHUMG00000159699.1 39055 474 2 ENSG00000244545.1 RP11-788A4.1 chr3 152648146 152650447 + lincRNA NOVEL OTTHUMG00000159698.1 2302 487 2 ENSG00000242561.1 ATP5LP5 chr3 152800434 152800732 - processed_pseudogene KNOWN OTTHUMG00000159696.1 299 299 1 ENSG00000230451.2 RPS29P6 chr1 37330852 37330996 + processed_pseudogene KNOWN OTTHUMG00000156996.2 145 145 1 ENSG00000169860.6 P2RY1 chr3 152834693 152841439 + protein_coding KNOWN OTTHUMG00000159694.2 6747 6747 1 ENSG00000273789.1 AC013251.1 chr3 152919730 152919796 - miRNA NOVEL NA 67 67 1 ENSG00000241810.1 HMGN2P13 chr3 153067278 153067551 + processed_pseudogene KNOWN OTTHUMG00000159686.1 274 274 1 ENSG00000241671.1 RP11-529G21.3 chr3 153129074 153129640 - processed_pseudogene KNOWN OTTHUMG00000159657.1 567 567 1 ENSG00000244268.1 RP11-529G21.2 chr3 153156511 153161775 - antisense NOVEL OTTHUMG00000159656.1 5265 323 2 ENSG00000181467.3 RAP2B chr3 153162270 153167173 + protein_coding KNOWN OTTHUMG00000159655.1 4904 4904 1 ENSG00000265813.2 RN7SL300P chr3 153199700 153200017 - misc_RNA KNOWN NA 318 318 1 ENSG00000241220.1 RP11-292E2.1 chr3 153357107 153374186 + lincRNA NOVEL OTTHUMG00000159625.1 17080 634 2 ENSG00000241912.1 RP11-292E2.2 chr3 153376831 153377562 + lincRNA NOVEL OTTHUMG00000159626.1 732 382 2 ENSG00000238755.3 RP11-23D24.2 chr3 153384934 153980186 - processed_transcript NOVEL OTTHUMG00000159707.3 595253 2816 13 ENSG00000233621.1 LINC01137 chr1 37454879 37474411 - antisense NOVEL OTTHUMG00000004224.1 19533 1395 3 ENSG00000243012.1 RP11-292E2.4 chr3 153431856 153443531 + lincRNA NOVEL OTTHUMG00000159628.1 11676 515 3 ENSG00000207323.1 RNU6-901P chr3 153471466 153471571 - snRNA KNOWN NA 106 106 1 ENSG00000237787.4 C3orf79 chr3 153484495 153502697 + lincRNA KNOWN OTTHUMG00000159629.1 18203 580 3 ENSG00000200162.1 Y_RNA chr3 153607377 153607479 + misc_RNA NOVEL NA 103 103 1 ENSG00000243486.1 RP11-217E22.5 chr3 153881526 153940836 + lincRNA NOVEL OTTHUMG00000159649.1 59311 703 6 ENSG00000201398.1 U8 chr3 154007367 154007502 - snoRNA NOVEL NA 136 136 1 ENSG00000240068.1 RPL21P42 chr3 154023835 154024298 + processed_pseudogene KNOWN OTTHUMG00000157416.1 464 464 1 ENSG00000243069.6 ARHGEF26-AS1 chr3 154024401 154121332 - processed_transcript NOVEL OTTHUMG00000159647.5 96932 6580 38 ENSG00000114790.11 ARHGEF26 chr3 154121003 154257827 + protein_coding KNOWN OTTHUMG00000159098.3 136825 5489 55 ENSG00000174953.12 DHX36 chr3 154272546 154324497 - protein_coding KNOWN OTTHUMG00000159109.2 51952 10562 128 ENSG00000163874.8 ZC3H12A chr1 37474552 37484379 + protein_coding KNOWN OTTHUMG00000004221.2 9828 3117 10 ENSG00000271922.1 snoU13 chr3 154329716 154329819 + snoRNA NOVEL NA 104 104 1 ENSG00000279305.1 RP11-316N24.2 chr3 154334809 154337047 - TEC KNOWN OTTHUMG00000175838.1 2239 2239 1 ENSG00000174948.5 GPR149 chr3 154337672 154429715 - protein_coding KNOWN OTTHUMG00000159131.1 92044 2323 4 ENSG00000240048.1 DDX50P2 chr3 154352136 154354799 - processed_pseudogene KNOWN OTTHUMG00000159130.1 2664 2193 2 ENSG00000243861.1 RP11-656A15.1 chr3 154511535 154539309 - lincRNA NOVEL OTTHUMG00000159128.1 27775 279 2 ENSG00000243154.1 CTD-2501O3.2 chr3 154651656 154652423 - processed_pseudogene KNOWN OTTHUMG00000159129.1 768 768 1 ENSG00000242151.1 DYNLL1P5 chr3 154657294 154657563 + processed_pseudogene KNOWN OTTHUMG00000159126.1 270 270 1 ENSG00000240601.1 RPL9P15 chr3 154676588 154677119 - processed_pseudogene KNOWN OTTHUMG00000157417.1 532 532 1 ENSG00000243969.1 RP11-439C8.1 chr3 154827016 154861017 - lincRNA NOVEL OTTHUMG00000159127.1 34002 351 2 ENSG00000243953.1 RP11-439C8.2 chr3 154969283 154970223 - lincRNA NOVEL OTTHUMG00000159132.1 941 521 2 ENSG00000278228.1 MIR6732 chr1 37480230 37480289 + miRNA KNOWN NA 60 60 1 ENSG00000196549.9 MME chr3 155024124 155183729 + protein_coding KNOWN OTTHUMG00000158455.3 159606 9620 185 ENSG00000240666.2 MME-AS1 chr3 155158370 155183285 - antisense NOVEL OTTHUMG00000158456.2 24916 828 2 ENSG00000241336.1 LINC01487 chr3 155240945 155243144 + lincRNA NOVEL OTTHUMG00000158465.1 2200 925 5 ENSG00000240045.1 RP11-451G4.2 chr3 155290229 155293775 - lincRNA NOVEL OTTHUMG00000158471.1 3547 873 3 ENSG00000242790.1 RP11-451G4.3 chr3 155291188 155294176 + lincRNA NOVEL OTTHUMG00000158468.1 2989 444 3 ENSG00000239443.1 PABPC1P10 chr3 155309427 155309807 - processed_pseudogene KNOWN OTTHUMG00000158466.1 381 381 1 ENSG00000114805.15 PLCH1 chr3 155375580 155745067 - protein_coding KNOWN OTTHUMG00000158477.3 369488 7173 121 ENSG00000248772.1 RP11-639F1.1 chr3 155375683 155375790 - unprocessed_pseudogene KNOWN OTTHUMG00000158469.1 108 108 1 ENSG00000243518.1 RP11-639F1.2 chr3 155401329 155403399 - processed_pseudogene KNOWN OTTHUMG00000158467.1 2071 840 3 ENSG00000242152.1 RP11-639F1.3 chr3 155431229 155433398 - processed_pseudogene KNOWN OTTHUMG00000158470.1 2170 947 2 ENSG00000163875.14 MEAF6 chr1 37492575 37514774 - protein_coding KNOWN OTTHUMG00000004223.3 22200 3487 64 ENSG00000272096.2 Metazoa_SRP chr3 155437538 155437823 - misc_RNA NOVEL NA 286 286 1 ENSG00000239508.1 PLCH1-AS1 chr3 155449184 155457753 + antisense NOVEL OTTHUMG00000158476.1 8570 1308 2 ENSG00000242925.1 PLCH1-AS2 chr3 155485803 155487121 + antisense NOVEL OTTHUMG00000158497.2 1319 408 2 ENSG00000239212.2 RPL6P7 chr3 155657760 155658612 + processed_pseudogene KNOWN OTTHUMG00000157419.2 853 853 1 ENSG00000214919.3 RP11-674E16.4 chr3 155742142 155743726 - sense_intronic NOVEL OTTHUMG00000187172.1 1585 1585 1 ENSG00000241307.1 RP11-674E16.1 chr3 155760617 155761217 + processed_pseudogene KNOWN OTTHUMG00000157420.1 601 601 1 ENSG00000174928.14 C3orf33 chr3 155762617 155806351 - protein_coding KNOWN OTTHUMG00000158496.2 43735 2134 27 ENSG00000169359.12 SLC33A1 chr3 155821024 155854429 - protein_coding KNOWN OTTHUMG00000158481.3 33406 9627 28 ENSG00000163655.14 GMPS chr3 155870536 155944026 + protein_coding KNOWN OTTHUMG00000158551.2 73491 8885 35 ENSG00000240489.1 SETP14 chr3 155987304 155988176 + processed_pseudogene KNOWN OTTHUMG00000158545.1 873 873 1 ENSG00000263675.1 MIR5581 chr1 37500935 37500994 - miRNA KNOWN NA 60 60 1 ENSG00000174930.4 VN2R1P chr3 156019646 156037647 + unitary_pseudogene KNOWN OTTHUMG00000154694.1 18002 1743 5 ENSG00000169282.16 KCNAB1 chr3 156037701 156539138 + protein_coding KNOWN OTTHUMG00000158552.3 501438 6852 152 ENSG00000242017.1 ALG1L15P chr3 156044155 156044948 - processed_pseudogene KNOWN OTTHUMG00000158546.1 794 794 1 ENSG00000242537.1 RP11-294L13.1 chr3 156111432 156114198 - processed_pseudogene KNOWN OTTHUMG00000158550.1 2767 2127 3 ENSG00000227709.4 RP11-118D22.3 chr3 156175852 156176911 - processed_pseudogene KNOWN OTTHUMG00000158547.1 1060 1060 1 ENSG00000240596.1 KCNAB1-AS2 chr3 156215560 156227883 - antisense NOVEL OTTHUMG00000158548.1 12324 538 4 ENSG00000242370.1 KCNAB1-AS1 chr3 156441157 156446905 - antisense NOVEL OTTHUMG00000158616.1 5749 456 3 ENSG00000272990.1 RP11-305K5.1 chr3 156523740 156524247 - antisense NOVEL OTTHUMG00000186047.1 508 508 1 ENSG00000114850.5 SSR3 chr3 156540140 156555184 - protein_coding KNOWN OTTHUMG00000158632.1 15045 4627 39 ENSG00000243926.1 TIPARP-AS1 chr3 156671862 156674378 - antisense NOVEL OTTHUMG00000158643.1 2517 1254 6 ENSG00000163877.9 SNIP1 chr1 37534449 37554302 - protein_coding KNOWN OTTHUMG00000004225.2 19854 4888 10 ENSG00000163659.11 TIPARP chr3 156673235 156706770 + protein_coding KNOWN OTTHUMG00000158646.1 33536 5048 40 ENSG00000174912.7 METTL15P1 chr3 156713884 156714928 - processed_pseudogene KNOWN OTTHUMG00000158645.1 1045 1045 1 ENSG00000240875.4 LINC00886 chr3 156747346 156817062 - lincRNA NOVEL OTTHUMG00000158647.1 69717 3822 8 ENSG00000230457.3 PA2G4P4 chr3 156809551 156810732 - processed_pseudogene KNOWN OTTHUMG00000158644.1 1182 1182 1 ENSG00000197980.10 LEKR1 chr3 156825481 157046129 + protein_coding KNOWN OTTHUMG00000160130.2 220649 5581 61 ENSG00000241879.1 KLF3P2 chr3 156977558 156977825 + processed_pseudogene KNOWN OTTHUMG00000158649.1 268 268 1 ENSG00000239706.1 RP11-6F2.3 chr3 156988117 156988712 - processed_pseudogene KNOWN OTTHUMG00000158650.1 596 596 1 ENSG00000222499.1 RN7SKP177 chr3 157017342 157017696 + misc_RNA KNOWN NA 355 355 1 ENSG00000243629.1 LINC00880 chr3 157081667 157123004 - lincRNA NOVEL OTTHUMG00000158717.1 41338 2018 4 ENSG00000241544.1 RP11-6F2.5 chr3 157081841 157088547 + lincRNA NOVEL OTTHUMG00000158714.1 6707 1497 3 ENSG00000233750.3 CICP27 chr1 131025 134836 + processed_pseudogene KNOWN OTTHUMG00000001257.3 3812 3812 1 ENSG00000235098.7 ANKRD65 chr1 1418420 1421769 - protein_coding KNOWN OTTHUMG00000002911.4 3350 2644 15 ENSG00000232273.1 FTH1P1 chr1 37544763 37545294 + processed_pseudogene KNOWN OTTHUMG00000004219.1 532 532 1 ENSG00000241135.4 LINC00881 chr3 157089881 157101135 + lincRNA NOVEL OTTHUMG00000158712.1 11255 1269 8 ENSG00000163660.10 CCNL1 chr3 157146508 157160760 - protein_coding KNOWN OTTHUMG00000158713.1 14253 8729 144 ENSG00000201778.1 Y_RNA chr3 157153548 157153640 + misc_RNA NOVEL NA 93 93 1 ENSG00000244515.1 KRT18P34 chr3 157162663 157163932 - processed_pseudogene KNOWN OTTHUMG00000158716.1 1270 1270 1 ENSG00000241770.1 RP11-555M1.3 chr3 157163452 157169133 + antisense NOVEL OTTHUMG00000158715.1 5682 320 2 ENSG00000222675.1 RNA5SP146 chr3 157173918 157174040 - rRNA KNOWN NA 123 123 1 ENSG00000243176.4 RP11-550I24.2 chr3 157175223 157381265 + processed_transcript NOVEL OTTHUMG00000158749.1 206043 1544 14 ENSG00000270981.1 RP11-550I24.3 chr3 157230320 157231208 - processed_pseudogene KNOWN OTTHUMG00000184404.1 889 889 1 ENSG00000197415.10 VEPH1 chr3 157259742 157533619 - protein_coding KNOWN OTTHUMG00000158711.4 273878 6554 102 ENSG00000280625.1 AC092944.1 chr3 157371476 157371601 - miRNA NOVEL NA 126 126 1 ENSG00000237749.4 RP3-423B22.5 chr1 37556247 37556499 + processed_pseudogene KNOWN OTTHUMG00000004220.2 253 253 1 ENSG00000163661.3 PTX3 chr3 157436789 157443628 + protein_coding KNOWN OTTHUMG00000158750.1 6840 1940 3 ENSG00000174899.9 PQLC2L chr3 157543246 157677749 + protein_coding KNOWN OTTHUMG00000158748.1 134504 3180 27 ENSG00000251751.1 RN7SKP46 chr3 157930492 157930725 - misc_RNA KNOWN NA 234 234 1 ENSG00000239716.1 RP11-290K4.1 chr3 157976561 157978136 - lincRNA NOVEL OTTHUMG00000158756.1 1576 466 2 ENSG00000242536.1 RP11-290K4.2 chr3 158016216 158088997 - lincRNA NOVEL OTTHUMG00000158757.1 72782 835 8 ENSG00000168779.18 SHOX2 chr3 158095954 158106503 - protein_coding KNOWN OTTHUMG00000158755.6 10550 5045 31 ENSG00000174891.11 RSRC1 chr3 158105855 158545730 + protein_coding KNOWN OTTHUMG00000158758.11 439876 5117 111 ENSG00000241723.1 RP11-113A11.1 chr3 158275809 158276421 - processed_pseudogene KNOWN OTTHUMG00000157421.1 613 613 1 ENSG00000277143.1 RP11-113A11.3 chr3 158336430 158336777 - processed_pseudogene KNOWN OTTHUMG00000187571.1 348 348 1 ENSG00000243314.1 RP11-538P18.1 chr3 158496561 158496934 + processed_pseudogene KNOWN OTTHUMG00000157422.1 374 374 1 ENSG00000163879.10 DNALI1 chr1 37556919 37566857 + protein_coding KNOWN OTTHUMG00000004222.3 9939 4456 17 ENSG00000243150.4 RP11-538P18.2 chr3 158545220 158571066 - antisense NOVEL OTTHUMG00000158791.1 25847 1696 9 ENSG00000178053.16 MLF1 chr3 158571163 158607252 + protein_coding KNOWN OTTHUMG00000158775.9 36090 3569 119 ENSG00000243025.1 MTAPP1 chr3 158609610 158610857 - processed_pseudogene KNOWN OTTHUMG00000158805.1 1248 819 2 ENSG00000243165.1 RP11-79M21.3 chr3 158626656 158626849 - processed_pseudogene KNOWN OTTHUMG00000158806.1 194 194 1 ENSG00000168827.13 GFM1 chr3 158644278 158692575 + protein_coding KNOWN OTTHUMG00000158804.3 48298 9032 91 ENSG00000079257.6 LXN chr3 158645822 158672693 - protein_coding KNOWN OTTHUMG00000158807.1 26872 1504 10 ENSG00000272087.1 RP11-379F4.7 chr3 158693120 158693768 - lincRNA NOVEL OTTHUMG00000185347.1 649 649 1 ENSG00000272440.1 RP11-379F4.6 chr3 158695367 158695581 + lincRNA NOVEL OTTHUMG00000185348.1 215 215 1 ENSG00000118849.8 RARRES1 chr3 158696892 158732696 - protein_coding KNOWN OTTHUMG00000158834.2 35805 2236 18 ENSG00000118855.17 MFSD1 chr3 158732198 158829719 + protein_coding KNOWN OTTHUMG00000158835.6 97522 5288 169 ENSG00000134697.11 GNL2 chr1 37566816 37595935 - protein_coding KNOWN OTTHUMG00000004322.4 29120 5745 40 ENSG00000240207.5 RP11-379F4.4 chr3 158732263 158784070 + antisense NOVEL OTTHUMG00000158833.2 51808 4177 23 ENSG00000243675.1 RP11-379F4.1 chr3 158763431 158763753 + processed_pseudogene KNOWN OTTHUMG00000157423.1 323 323 1 ENSG00000271778.1 RP11-379F4.8 chr3 158782547 158783124 + sense_intronic NOVEL OTTHUMG00000185565.1 578 578 1 ENSG00000272247.1 RP11-379F4.9 chr3 158801257 158801935 - antisense NOVEL OTTHUMG00000185566.1 679 679 1 ENSG00000232374.5 GPR79 chr3 158841093 158841960 - processed_pseudogene KNOWN OTTHUMG00000158842.1 868 868 1 ENSG00000279311.1 RP11-170K4.2 chr3 158869898 158871821 + TEC KNOWN OTTHUMG00000175840.1 1924 1924 1 ENSG00000250588.5 IQCJ-SCHIP1 chr3 158962235 159897366 + protein_coding KNOWN OTTHUMG00000162426.1 935132 4409 82 ENSG00000214216.9 IQCJ chr3 158962928 159266307 + protein_coding KNOWN OTTHUMG00000166440.1 303380 2923 16 ENSG00000263634.1 MIR3919 chr3 159282646 159282734 + miRNA KNOWN NA 89 89 1 ENSG00000244249.1 RP11-441M10.1 chr3 159386756 159387440 - processed_pseudogene KNOWN OTTHUMG00000157425.1 685 685 1 ENSG00000169218.12 RSPO1 chr1 37611350 37634923 - protein_coding KNOWN OTTHUMG00000004321.4 23574 3089 28 ENSG00000243116.1 RP11-564C24.1 chr3 159721524 159722401 - processed_pseudogene KNOWN OTTHUMG00000158932.1 878 878 1 ENSG00000241211.1 IQCJ-SCHIP1-AS1 chr3 159765387 159768612 - antisense NOVEL OTTHUMG00000158933.1 3226 592 4 ENSG00000252763.1 RNU2-31P chr3 159808416 159808570 - snRNA KNOWN NA 155 155 1 ENSG00000264146.1 AC021654.1 chr3 159822612 159822695 - miRNA NOVEL NA 84 84 1 ENSG00000151967.17 SCHIP1 chr3 159839861 159897360 + protein_coding KNOWN OTTHUMG00000158934.2 57500 7645 33 ENSG00000244040.4 IL12A-AS1 chr3 159913400 160225299 - antisense NOVEL OTTHUMG00000158951.1 311900 3689 19 ENSG00000168811.5 IL12A chr3 159988750 159996019 + protein_coding KNOWN OTTHUMG00000158942.2 7270 2040 31 ENSG00000242107.2 LINC01100 chr3 160016024 160031423 + lincRNA NOVEL OTTHUMG00000158954.2 15400 740 5 ENSG00000184100.6 BRD7P2 chr3 160100850 160102793 + processed_pseudogene KNOWN OTTHUMG00000158952.1 1944 1944 1 ENSG00000180044.4 C3orf80 chr3 160225636 160228213 + protein_coding NOVEL OTTHUMG00000158950.2 2578 2578 4 ENSG00000116922.13 C1orf109 chr1 37681570 37692249 - protein_coding KNOWN OTTHUMG00000004323.4 10680 4434 47 ENSG00000248710.1 RP11-432B6.3 chr3 160227454 160449829 - protein_coding NOVEL OTTHUMG00000162252.1 222376 3360 19 ENSG00000068885.13 IFT80 chr3 160256986 160399880 - protein_coding KNOWN OTTHUMG00000158953.7 142895 7175 192 ENSG00000243687.1 RP11-432B6.1 chr3 160342685 160343015 + processed_pseudogene KNOWN OTTHUMG00000157339.1 331 331 1 ENSG00000113810.14 SMC4 chr3 160399274 160434962 + protein_coding KNOWN OTTHUMG00000159006.6 35689 8457 215 ENSG00000207779.1 MIR15B chr3 160404588 160404685 + miRNA KNOWN NA 98 98 1 ENSG00000198987.1 MIR16-2 chr3 160404745 160404825 + miRNA KNOWN NA 81 81 1 ENSG00000213186.6 TRIM59 chr3 160432445 160485773 - protein_coding KNOWN OTTHUMG00000159034.1 53329 7865 23 ENSG00000244009.1 B3GAT3P1 chr3 160452598 160453403 + processed_pseudogene KNOWN OTTHUMG00000159032.1 806 806 1 ENSG00000238427.1 RNU7-136P chr3 160472348 160472416 - snRNA KNOWN NA 69 69 1 ENSG00000186432.7 KPNA4 chr3 160494995 160565588 - protein_coding KNOWN OTTHUMG00000159033.2 70594 9413 24 ENSG00000134690.9 CDCA8 chr1 37692418 37709719 + protein_coding KNOWN OTTHUMG00000004320.1 17302 2469 21 ENSG00000238741.1 SCARNA7 chr3 160514907 160515236 - scaRNA KNOWN NA 330 330 1 ENSG00000229320.3 KRT8P12 chr3 160565447 160569248 + transcribed_processed_pseudogene KNOWN OTTHUMG00000159030.1 3802 2047 4 ENSG00000242285.1 RPL6P8 chr3 160584945 160585787 + processed_pseudogene KNOWN OTTHUMG00000157340.1 843 843 1 ENSG00000179674.3 ARL14 chr3 160677159 160678452 + protein_coding KNOWN OTTHUMG00000159031.1 1294 1294 1 ENSG00000207084.1 SNORA72 chr3 160696929 160697060 + snoRNA NOVEL NA 132 132 1 ENSG00000260572.1 RP11-16N11.2 chr3 160753428 160755142 - antisense NOVEL OTTHUMG00000175842.1 1715 1715 1 ENSG00000163590.12 PPM1L chr3 160755602 161078907 + protein_coding KNOWN OTTHUMG00000159048.2 323306 12447 22 ENSG00000169255.12 B3GALNT1 chr3 161083883 161105384 - protein_coding KNOWN OTTHUMG00000159064.1 21502 4183 99 ENSG00000169251.11 NMD3 chr3 161104696 161253532 + protein_coding KNOWN OTTHUMG00000159063.4 148837 4869 93 ENSG00000271052.1 RP11-479I16.2 chr3 161222911 161223147 - processed_pseudogene KNOWN OTTHUMG00000184355.1 237 237 1 ENSG00000183317.15 EPHA10 chr1 37713880 37765133 - protein_coding KNOWN OTTHUMG00000004325.3 51254 8152 116 ENSG00000240138.1 EEF1GP4 chr3 161324913 161326219 - processed_pseudogene KNOWN OTTHUMG00000159071.1 1307 1307 1 ENSG00000243838.1 PSMC1P7 chr3 161328924 161330238 - processed_pseudogene KNOWN OTTHUMG00000159070.1 1315 1315 1 ENSG00000196542.7 SPTSSB chr3 161344792 161372880 - protein_coding KNOWN OTTHUMG00000159073.1 28089 3745 11 ENSG00000240567.1 RP11-3P17.4 chr3 161426427 161448242 + lincRNA NOVEL OTTHUMG00000159075.2 21816 2845 4 ENSG00000269888.1 RP11-3P17.5 chr3 161429112 161429613 + lincRNA NOVEL OTTHUMG00000183890.1 502 248 2 ENSG00000234851.4 RP11-3P17.3 chr3 161429127 161429597 - processed_pseudogene KNOWN OTTHUMG00000159072.1 471 471 1 ENSG00000182447.4 OTOL1 chr3 161496808 161503942 + protein_coding KNOWN OTTHUMG00000159074.1 7135 1434 4 ENSG00000240354.1 RP11-774I5.1 chr3 161816909 161821908 - lincRNA NOVEL OTTHUMG00000159088.1 5000 483 2 ENSG00000241874.1 TOMM22P6 chr3 162486541 162486949 - processed_pseudogene KNOWN OTTHUMG00000159087.1 409 409 1 ENSG00000243044.1 RP13-526J3.1 chr3 162601627 162601792 + processed_pseudogene KNOWN OTTHUMG00000159086.1 166 166 1 ENSG00000200421.1 Y_RNA chr1 37737955 37738054 - misc_RNA NOVEL NA 100 100 1 ENSG00000241168.1 RP11-10O22.1 chr3 163026396 163232149 + lincRNA NOVEL OTTHUMG00000158020.1 205754 1834 5 ENSG00000244571.1 RP11-535I24.2 chr3 163115429 163116186 + processed_pseudogene KNOWN OTTHUMG00000157334.1 758 758 1 ENSG00000241369.4 LINC01192 chr3 163127923 163361563 - lincRNA NOVEL OTTHUMG00000158021.3 233641 3079 53 ENSG00000238924.2 RNU7-163P chr3 163470205 163470266 - snRNA KNOWN NA 62 62 1 ENSG00000240792.1 RP11-418B12.1 chr3 163475067 163479365 + lincRNA NOVEL OTTHUMG00000158042.1 4299 749 2 ENSG00000265090.1 AC104637.1 chr3 163516402 163516487 - miRNA NOVEL NA 86 86 1 ENSG00000214210.4 RP11-208P4.1 chr3 164001606 164002465 - processed_pseudogene KNOWN OTTHUMG00000158066.1 860 860 1 ENSG00000221251.1 MIR1263 chr3 164171471 164171556 - miRNA KNOWN NA 86 86 1 ENSG00000241636.1 LINC01323 chr3 164670878 164686076 - lincRNA NOVEL OTTHUMG00000158384.1 15199 576 4 ENSG00000241767.2 LINC01324 chr3 164714095 164831480 - lincRNA NOVEL OTTHUMG00000158064.2 117386 844 6 ENSG00000214141.4 ACTN4P2 chr1 37776670 37779418 + processed_pseudogene KNOWN OTTHUMG00000004315.1 2749 1892 2 ENSG00000090402.6 SI chr3 164978898 165078495 - protein_coding KNOWN OTTHUMG00000158065.1 99598 6138 55 ENSG00000200052.1 Y_RNA chr3 165122713 165122823 - misc_RNA NOVEL NA 111 111 1 ENSG00000239205.1 RP11-747D18.1 chr3 165150006 165158062 - lincRNA NOVEL OTTHUMG00000158073.1 8057 1948 2 ENSG00000121871.3 SLITRK3 chr3 165186720 165197109 - protein_coding KNOWN OTTHUMG00000158072.2 10390 4892 6 ENSG00000244128.4 LINC01322 chr3 165206960 165655423 + lincRNA NOVEL OTTHUMG00000158130.1 448464 1860 19 ENSG00000114200.8 BCHE chr3 165772904 165837472 - protein_coding KNOWN OTTHUMG00000158131.2 64569 3082 20 ENSG00000242178.1 MTND4P17 chr3 166160021 166160370 - processed_pseudogene KNOWN OTTHUMG00000158171.1 350 350 1 ENSG00000240084.1 RP11-12N13.6 chr3 166160414 166160704 - processed_pseudogene KNOWN OTTHUMG00000158214.1 291 291 1 ENSG00000240824.1 MTND3P7 chr3 166160777 166161119 - processed_pseudogene KNOWN OTTHUMG00000158212.1 343 343 1 ENSG00000242456.1 RP11-12N13.4 chr3 166161203 166161968 - processed_pseudogene KNOWN OTTHUMG00000158211.2 766 766 1 ENSG00000225905.1 RP4-758J18.7 chr1 1420245 1422691 + antisense NOVEL OTTHUMG00000002912.1 2447 543 2 ENSG00000227416.2 RP11-109P14.2 chr1 37782457 37782885 - processed_pseudogene KNOWN OTTHUMG00000004316.1 429 429 1 ENSG00000242326.1 RP11-12N13.2 chr3 166181313 166181820 - processed_pseudogene KNOWN OTTHUMG00000158169.1 508 508 1 ENSG00000244429.1 RP11-12N13.1 chr3 166293756 166294353 + processed_pseudogene KNOWN OTTHUMG00000158170.1 598 598 1 ENSG00000244321.1 LINC01326 chr3 166569693 166570763 - lincRNA NOVEL OTTHUMG00000158209.1 1071 755 2 ENSG00000274149.1 RP11-450H5.4 chr3 166605188 166605455 + processed_pseudogene KNOWN OTTHUMG00000184304.2 268 268 1 ENSG00000251759.1 RN7SKP298 chr3 166670029 166670122 - misc_RNA KNOWN NA 94 94 1 ENSG00000224962.4 PSAT1P4 chr3 166691187 166691712 + processed_pseudogene KNOWN OTTHUMG00000158210.1 526 526 1 ENSG00000240458.1 RP11-450H5.3 chr3 166721458 166721610 + processed_pseudogene KNOWN OTTHUMG00000158213.1 153 153 1 ENSG00000231516.3 CBX1P5 chr3 166811009 166811567 + processed_pseudogene KNOWN OTTHUMG00000158232.1 559 559 1 ENSG00000276661.1 AC128686.1 chr3 166829227 166829294 + miRNA NOVEL NA 68 68 1 ENSG00000240033.1 RP11-12K11.2 chr3 166835021 166844956 - lincRNA NOVEL OTTHUMG00000158283.1 9936 789 2 ENSG00000185090.13 MANEAL chr1 37793802 37801137 + protein_coding KNOWN OTTHUMG00000004317.2 7336 3018 17 ENSG00000239227.1 RP11-12K11.1 chr3 166861944 166862110 + processed_pseudogene KNOWN OTTHUMG00000158285.1 167 167 1 ENSG00000215922.1 AC092965.1 chr3 167025413 167025499 + miRNA NOVEL NA 87 87 1 ENSG00000220343.5 RP11-440K22.1 chr3 167065831 167066320 + processed_pseudogene KNOWN OTTHUMG00000158286.1 490 490 1 ENSG00000169064.11 ZBBX chr3 167240287 167381346 - protein_coding KNOWN OTTHUMG00000133560.5 141060 3972 139 ENSG00000241669.1 LINC01327 chr3 167392796 167408519 + lincRNA NOVEL OTTHUMG00000158284.1 15724 535 4 ENSG00000114204.13 SERPINI2 chr3 167441789 167479004 - protein_coding KNOWN OTTHUMG00000158231.1 37216 2835 58 ENSG00000174776.9 WDR49 chr3 167478684 167653983 - protein_coding KNOWN OTTHUMG00000158290.4 175300 3891 73 ENSG00000114209.13 PDCD10 chr3 167683298 167734939 - protein_coding KNOWN OTTHUMG00000158415.4 51642 3275 119 ENSG00000241120.1 HMGN1P8 chr3 167694355 167694642 - processed_pseudogene KNOWN OTTHUMG00000158449.1 288 288 1 ENSG00000163536.11 SERPINI1 chr3 167735243 167825568 + protein_coding KNOWN OTTHUMG00000158450.10 90326 2418 38 ENSG00000233728.1 RP11-109P14.9 chr1 37799720 37800879 - antisense NOVEL OTTHUMG00000037488.1 1160 700 2 ENSG00000242924.1 RP11-298O21.6 chr3 167864773 167876917 + lincRNA NOVEL OTTHUMG00000158502.1 12145 457 2 ENSG00000244214.1 RP11-298O21.7 chr3 167864849 167866614 + lincRNA NOVEL OTTHUMG00000158586.1 1766 560 2 ENSG00000244706.2 RP11-298O21.3 chr3 167866500 167870977 - lincRNA NOVEL OTTHUMG00000158500.2 4478 558 3 ENSG00000240292.1 RP11-298O21.2 chr3 167866635 167883382 + lincRNA NOVEL OTTHUMG00000158587.1 16748 661 7 ENSG00000239238.1 MEMO1P3 chr3 167888414 167888715 + processed_pseudogene KNOWN OTTHUMG00000158501.1 302 302 1 ENSG00000244227.4 LINC01330 chr3 167895948 167924011 + lincRNA NOVEL OTTHUMG00000158503.2 28064 3198 35 ENSG00000242036.1 RP11-603B13.1 chr3 167956311 167956616 - processed_pseudogene KNOWN OTTHUMG00000158560.1 306 306 1 ENSG00000241203.1 HMGN2P26 chr3 167958744 167959082 + processed_pseudogene KNOWN OTTHUMG00000158561.1 339 339 1 ENSG00000173905.7 GOLIM4 chr3 168008677 168095975 - protein_coding KNOWN OTTHUMG00000158554.2 87299 4647 34 ENSG00000266363.1 AC069243.1 chr3 168203509 168203600 + miRNA NOVEL NA 92 92 1 ENSG00000196449.3 YRDC chr1 37802944 37808185 - protein_coding KNOWN OTTHUMG00000004318.1 5242 1826 5 ENSG00000206120.10 EGFEM1P chr3 168249522 168830599 + unitary_pseudogene KNOWN OTTHUMG00000154721.3 581078 4658 59 ENSG00000241882.1 RP11-637O11.2 chr3 168288553 168291228 + lincRNA NOVEL OTTHUMG00000158562.1 2676 545 2 ENSG00000222357.1 RNU2-20P chr3 168475198 168475388 + snRNA KNOWN NA 191 191 1 ENSG00000207717.1 MIR551B chr3 168551854 168551949 + miRNA KNOWN NA 96 96 1 ENSG00000226765.1 RP11-694D5.1 chr3 168666559 168667423 + processed_pseudogene KNOWN OTTHUMG00000157292.1 865 865 1 ENSG00000231688.1 RPL21P43 chr3 168858659 168859130 - processed_pseudogene KNOWN OTTHUMG00000157291.1 472 472 1 ENSG00000242268.2 RP11-368I23.2 chr3 168903366 168921996 + lincRNA NOVEL OTTHUMG00000158577.1 18631 710 4 ENSG00000272797.1 RP11-368I23.3 chr3 168927475 168927919 + lincRNA NOVEL OTTHUMG00000186053.1 445 445 1 ENSG00000273177.1 RP11-368I23.4 chr3 168928169 168928598 + lincRNA NOVEL OTTHUMG00000186054.1 430 430 1 ENSG00000241383.1 RP11-152C17.1 chr3 169003074 169005466 + lincRNA NOVEL OTTHUMG00000158576.1 2393 429 2 ENSG00000197982.13 C1orf122 chr1 37806979 37809454 + protein_coding KNOWN OTTHUMG00000004319.6 2476 2231 10 ENSG00000085276.16 MECOM chr3 169083499 169663618 - protein_coding KNOWN OTTHUMG00000158596.6 580120 9103 174 ENSG00000241479.1 RP11-641D5.2 chr3 169447867 169477052 + antisense NOVEL OTTHUMG00000158687.1 29186 535 5 ENSG00000213178.3 RP11-641D5.1 chr3 169483671 169484080 - processed_pseudogene KNOWN OTTHUMG00000157287.1 410 410 1 ENSG00000281137.1 AC074033.1 chr3 169483709 169483946 + protein_coding NOVEL NA 238 45 2 ENSG00000242795.2 RP11-3K16.2 chr3 169613510 169623951 - sense_intronic NOVEL OTTHUMG00000158688.1 10442 513 3 ENSG00000244381.1 RP11-3K16.1 chr3 169709295 169709765 + processed_pseudogene KNOWN OTTHUMG00000158630.1 471 471 1 ENSG00000206777.1 RNU6-637P chr3 169720187 169720293 - snRNA KNOWN NA 107 107 1 ENSG00000270141.3 TERC chr3 169764520 169765060 - lincRNA KNOWN OTTHUMG00000184024.1 541 541 1 ENSG00000277925.1 Telomerase-vert chr3 169764610 169765047 - misc_RNA NOVEL NA 438 438 1 ENSG00000184378.2 ACTRT3 chr3 169766921 169769895 - protein_coding KNOWN OTTHUMG00000184025.1 2975 2005 2 ENSG00000188786.9 MTF1 chr1 37809567 37859620 - protein_coding KNOWN OTTHUMG00000004439.2 50054 8024 13 ENSG00000269889.1 RP11-816J6.3 chr3 169769649 169772043 + antisense NOVEL OTTHUMG00000184026.1 2395 843 2 ENSG00000085274.14 MYNN chr3 169772831 169789716 + protein_coding KNOWN OTTHUMG00000184027.1 16886 5730 37 ENSG00000269984.1 RP11-362K14.5 chr3 169777192 169780334 - antisense NOVEL OTTHUMG00000184028.1 3143 3143 1 ENSG00000171757.14 LRRC34 chr3 169793428 169812986 - protein_coding KNOWN OTTHUMG00000164419.3 19559 4851 79 ENSG00000270135.1 RP11-362K14.7 chr3 169793495 169793966 + antisense NOVEL OTTHUMG00000184029.1 472 472 1 ENSG00000270096.1 RP11-362K14.6 chr3 169794962 169796213 + antisense NOVEL OTTHUMG00000184030.1 1252 1252 1 ENSG00000188306.6 LRRIQ4 chr3 169821922 169837775 + protein_coding KNOWN OTTHUMG00000164420.1 15854 1827 5 ENSG00000114248.8 LRRC31 chr3 169839179 169869930 - protein_coding KNOWN OTTHUMG00000164421.1 30752 3113 33 ENSG00000240128.1 KRT18P43 chr3 169902980 169904260 - processed_pseudogene KNOWN OTTHUMG00000158732.1 1281 1281 1 ENSG00000187033.8 SAMD7 chr3 169911572 169939175 + protein_coding KNOWN OTTHUMG00000158730.1 27604 2512 27 ENSG00000235673.1 RP11-109P14.8 chr1 37840986 37841676 + processed_pseudogene KNOWN OTTHUMG00000004437.1 691 691 1 ENSG00000244039.1 RP11-379K17.2 chr3 169931998 169933229 + processed_pseudogene KNOWN OTTHUMG00000158731.1 1232 1232 1 ENSG00000239219.2 RP11-379K17.4 chr3 169939353 169966734 - antisense NOVEL OTTHUMG00000158728.3 27382 7977 9 ENSG00000244193.1 RP11-379K17.5 chr3 169945987 169946754 - transcribed_processed_pseudogene KNOWN OTTHUMG00000158729.1 768 768 1 ENSG00000008952.15 SEC62 chr3 169966635 169998373 + protein_coding KNOWN OTTHUMG00000158753.4 31739 7928 51 ENSG00000240373.1 SEC62-AS1 chr3 169978536 169985715 - antisense NOVEL OTTHUMG00000158754.1 7180 346 2 ENSG00000173890.15 GPR160 chr3 170037929 170085403 + protein_coding KNOWN OTTHUMG00000158776.2 47475 4458 31 ENSG00000201342.1 RNU4-38P chr3 170057301 170057429 + snRNA KNOWN NA 129 129 1 ENSG00000242583.1 RP11-379K17.9 chr3 170062244 170062951 + processed_pseudogene KNOWN OTTHUMG00000158778.1 708 708 1 ENSG00000173889.14 PHC3 chr3 170086732 170181749 - protein_coding KNOWN OTTHUMG00000158777.7 95018 16919 107 ENSG00000268220.1 RP11-379K17.12 chr3 170087810 170089590 + antisense NOVEL OTTHUMG00000185281.1 1781 1781 1 ENSG00000230955.1 RP11-109P14.10 chr1 37860697 37861580 + antisense NOVEL OTTHUMG00000037489.1 884 481 2 ENSG00000199536.1 RNU6-315P chr3 170149845 170149951 + snRNA KNOWN NA 107 107 1 ENSG00000163558.11 PRKCI chr3 170222365 170305981 + protein_coding KNOWN OTTHUMG00000150214.4 83617 5841 38 ENSG00000200118.1 Y_RNA chr3 170244782 170244881 + misc_RNA NOVEL NA 100 100 1 ENSG00000239628.1 RP11-543D10.2 chr3 170345678 170353961 + lincRNA NOVEL OTTHUMG00000158828.1 8284 469 2 ENSG00000136603.12 SKIL chr3 170357678 170396835 + protein_coding KNOWN OTTHUMG00000158831.4 39158 7782 42 ENSG00000242578.1 RP11-469J4.3 chr3 170410512 170418615 + lincRNA NOVEL OTTHUMG00000158939.1 8104 664 4 ENSG00000013297.9 CLDN11 chr3 170418865 170860380 + protein_coding KNOWN OTTHUMG00000158940.3 441516 6032 33 ENSG00000013293.5 SLC7A14 chr3 170459584 170586074 - protein_coding KNOWN OTTHUMG00000158941.2 126491 10459 10 ENSG00000241416.1 KRT8P13 chr3 170495627 170496636 + processed_pseudogene KNOWN OTTHUMG00000158860.1 1010 1010 1 ENSG00000281375.1 AC008041.1 chr3 170496131 170496263 - miRNA NOVEL NA 133 133 1 ENSG00000204084.11 INPP5B chr1 37860697 37947057 - protein_coding KNOWN OTTHUMG00000004436.2 86361 8930 135 ENSG00000213174.3 RP11-373E16.1 chr3 170653846 170654259 - processed_pseudogene KNOWN OTTHUMG00000157285.1 414 414 1 ENSG00000244738.1 RP11-373E16.3 chr3 170656562 170662123 + sense_intronic NOVEL OTTHUMG00000158859.1 5562 3097 2 ENSG00000239739.1 RP11-373E16.4 chr3 170740351 170741365 - lincRNA NOVEL OTTHUMG00000158937.1 1015 263 2 ENSG00000163584.16 RPL22L1 chr3 170864875 170870483 - protein_coding KNOWN OTTHUMG00000158957.2 5609 2326 22 ENSG00000163577.6 EIF5A2 chr3 170888415 170908693 - protein_coding KNOWN OTTHUMG00000158958.8 20279 5593 21 ENSG00000240704.1 KLF7P1 chr3 170952850 170953897 - processed_pseudogene KNOWN OTTHUMG00000158998.1 1048 1048 1 ENSG00000199488.1 RNU1-70P chr3 170994870 170995033 - snRNA KNOWN NA 164 164 1 ENSG00000163581.12 SLC2A2 chr3 170996348 171026750 - protein_coding KNOWN OTTHUMG00000158997.1 30403 3417 37 ENSG00000154310.15 TNIK chr3 171061339 171460408 - protein_coding KNOWN OTTHUMG00000159036.2 399070 8523 291 ENSG00000207963.1 MIR569 chr3 171106664 171106759 - miRNA KNOWN NA 96 96 1 ENSG00000252448.1 SNORA63 chr1 37884237 37884317 + snoRNA NOVEL NA 81 81 1 ENSG00000222506.1 Y_RNA chr3 171439526 171439627 + misc_RNA NOVEL NA 102 102 1 ENSG00000279673.1 RP11-185E8.2 chr3 171460612 171462256 + TEC KNOWN OTTHUMG00000175845.1 1645 1645 1 ENSG00000240497.2 RP11-185E8.1 chr3 171468084 171469633 + lincRNA NOVEL OTTHUMG00000159050.3 1550 229 2 ENSG00000207114.1 RNU6-348P chr3 171504245 171504351 - snRNA KNOWN NA 107 107 1 ENSG00000234594.1 RP11-263C16.2 chr3 171534423 171534615 + processed_pseudogene KNOWN OTTHUMG00000156959.1 193 193 1 ENSG00000075651.14 PLD1 chr3 171600405 171810950 - protein_coding KNOWN OTTHUMG00000156947.6 210546 12859 124 ENSG00000186329.8 TMEM212 chr3 171843349 171938715 + protein_coding KNOWN OTTHUMG00000156839.3 95367 2719 24 ENSG00000234717.1 TMEM212-AS1 chr3 171876352 171900740 - lincRNA NOVEL OTTHUMG00000156879.1 24389 427 3 ENSG00000235943.1 TMEM212-IT1 chr3 171894436 171895240 + sense_intronic NOVEL OTTHUMG00000156878.1 805 470 2 ENSG00000281752.1 AC055714.1 chr3 171978374 171978518 - miRNA NOVEL NA 145 145 1 ENSG00000205116.3 TMEM88B chr1 1426128 1427787 + protein_coding KNOWN OTTHUMG00000153395.2 1660 492 2 ENSG00000222282.1 RNU6-584P chr1 37885023 37885117 + snRNA KNOWN NA 95 95 1 ENSG00000075420.11 FNDC3B chr3 172039628 172401665 + protein_coding KNOWN OTTHUMG00000156761.4 362038 13270 121 ENSG00000237483.1 RP11-423E7.1 chr3 172225428 172225872 - processed_pseudogene KNOWN OTTHUMG00000156948.2 445 445 1 ENSG00000243398.3 RN7SL141P chr3 172237326 172237591 + misc_RNA KNOWN NA 266 266 1 ENSG00000279862.1 RP11-423E7.2 chr3 172301654 172303052 - TEC KNOWN OTTHUMG00000187180.1 1399 1399 1 ENSG00000236686.1 BZW1P1 chr3 172425850 172427089 - processed_pseudogene KNOWN OTTHUMG00000156945.1 1240 1240 1 ENSG00000121853.3 GHSR chr3 172445133 172448456 - protein_coding KNOWN OTTHUMG00000156946.1 3324 1246 3 ENSG00000121858.9 TNFSF10 chr3 172505508 172523507 - protein_coding KNOWN OTTHUMG00000156917.2 18000 3473 21 ENSG00000224611.1 AC007919.18 chr3 172522228 172522444 + processed_pseudogene KNOWN OTTHUMG00000156760.1 217 217 1 ENSG00000280600.1 AC007919.2 chr3 172548493 172548628 - miRNA NOVEL NA 136 136 1 ENSG00000223387.5 RP11-408H1.3 chr3 172560888 172595607 - lincRNA NOVEL OTTHUMG00000156985.3 34720 3667 9 ENSG00000277168.1 Metazoa_SRP chr1 37953508 37953780 + misc_RNA NOVEL NA 273 273 1 ENSG00000224426.1 SLC31A1P1 chr3 172603440 172604006 - processed_pseudogene KNOWN OTTHUMG00000156918.1 567 567 1 ENSG00000144959.8 NCEH1 chr3 172630249 172711218 - protein_coding KNOWN OTTHUMG00000156872.5 80970 4808 25 ENSG00000264711.1 AC007919.1 chr3 172671559 172671639 - miRNA NOVEL NA 81 81 1 ENSG00000231384.1 AC007919.19 chr3 172680714 172681224 + processed_pseudogene KNOWN OTTHUMG00000156763.2 511 511 1 ENSG00000252082.1 RNU6-547P chr3 172703124 172703225 + snRNA KNOWN NA 102 102 1 ENSG00000114346.12 ECT2 chr3 172750682 172821474 + protein_coding KNOWN OTTHUMG00000156762.5 70793 5499 177 ENSG00000200355.1 SNORA72 chr3 172771277 172771405 - snoRNA NOVEL NA 129 129 1 ENSG00000201458.1 RNU4-4P chr3 172796429 172796558 - snRNA KNOWN NA 130 130 1 ENSG00000280919.1 AC108667.1 chr3 172826192 172826261 - miRNA NOVEL NA 70 70 1 ENSG00000227440.1 ATP5G1P4 chr3 172828736 172829176 - processed_pseudogene KNOWN OTTHUMG00000156866.1 441 441 1 ENSG00000183431.10 SF3A3 chr1 37956975 37990921 - protein_coding KNOWN OTTHUMG00000004438.1 33947 4740 56 ENSG00000237501.1 RP11-816B4.1 chr3 172830981 172831229 - processed_pseudogene KNOWN OTTHUMG00000156867.1 249 249 1 ENSG00000144962.6 SPATA16 chr3 172889358 173141268 - protein_coding KNOWN OTTHUMG00000156865.1 251911 2106 11 ENSG00000237473.1 RP11-324C10.1 chr3 173153737 173336965 + lincRNA NOVEL OTTHUMG00000157006.2 183229 470 5 ENSG00000169760.16 NLGN1 chr3 173396284 174286644 + protein_coding KNOWN OTTHUMG00000157005.4 890361 10148 42 ENSG00000237645.1 RP11-521A24.1 chr3 173644231 173644711 + processed_pseudogene KNOWN OTTHUMG00000157015.1 481 481 1 ENSG00000228213.4 NLGN1-AS1 chr3 173910498 173920796 - antisense NOVEL OTTHUMG00000157016.1 10299 815 7 ENSG00000252982.1 RN7SKP234 chr3 174057641 174057864 + misc_RNA KNOWN NA 224 224 1 ENSG00000232601.1 RP11-393N4.1 chr3 174302944 174303287 - processed_pseudogene KNOWN OTTHUMG00000157052.1 344 344 1 ENSG00000213169.3 RP11-393N4.2 chr3 174377244 174378005 + processed_pseudogene KNOWN OTTHUMG00000157053.2 762 762 1 ENSG00000177694.13 NAALADL2 chr3 174438573 175810552 + protein_coding KNOWN OTTHUMG00000157120.4 1371980 13599 86 ENSG00000212541.1 RNU6-510P chr1 37991462 37991569 + snRNA KNOWN NA 108 108 1 ENSG00000253020.2 RN7SKP40 chr3 174631823 174632064 + misc_RNA KNOWN NA 242 242 1 ENSG00000230497.2 EEF1B2P8 chr3 175059361 175060031 - processed_pseudogene KNOWN OTTHUMG00000157119.1 671 671 1 ENSG00000230292.4 NAALADL2-AS3 chr3 175079307 175115242 - processed_transcript NOVEL OTTHUMG00000157080.2 35936 422 7 ENSG00000226779.1 NAALADL2-AS2 chr3 175234861 175271096 - antisense NOVEL OTTHUMG00000157131.1 36236 1038 3 ENSG00000264974.1 MIR4789 chr3 175369540 175369621 + miRNA KNOWN NA 82 82 1 ENSG00000199792.1 RNU6-1233P chr3 175397247 175397348 - snRNA KNOWN NA 102 102 1 ENSG00000201648.1 RNU4-91P chr3 175609479 175609613 + snRNA KNOWN NA 135 135 1 ENSG00000236241.1 RP11-744O11.2 chr3 175675087 175676801 - processed_pseudogene KNOWN OTTHUMG00000157117.2 1715 1715 1 ENSG00000214192.3 UBE2V1P2 chr3 175718231 175718670 - processed_pseudogene KNOWN OTTHUMG00000157118.1 440 440 1 ENSG00000201452.1 RNU6-1317P chr3 175767558 175767661 + snRNA KNOWN NA 104 104 1 ENSG00000183386.8 FHL3 chr1 37996770 38005606 - protein_coding KNOWN OTTHUMG00000004434.2 8837 2004 23 ENSG00000225552.1 NAALADL2-AS1 chr3 175773145 175776333 - antisense NOVEL OTTHUMG00000157121.2 3189 804 3 ENSG00000260217.1 RP11-809F4.3 chr3 175938929 175941037 - lincRNA NOVEL OTTHUMG00000175847.2 2109 2109 1 ENSG00000230362.1 RP11-809F4.2 chr3 175977497 175978570 - processed_pseudogene KNOWN OTTHUMG00000157141.1 1074 1074 1 ENSG00000236357.1 EI24P1 chr3 176068042 176068908 - processed_pseudogene KNOWN OTTHUMG00000157142.4 867 867 1 ENSG00000271413.1 RP11-809F4.4 chr3 176069107 176069252 + processed_pseudogene KNOWN OTTHUMG00000184291.1 146 146 1 ENSG00000238026.1 RP11-78E6.1 chr3 176113702 176114537 - processed_pseudogene KNOWN OTTHUMG00000157230.1 836 836 1 ENSG00000223715.1 LINC01208 chr3 176604143 176635532 - lincRNA NOVEL OTTHUMG00000157218.2 31390 1040 6 ENSG00000232461.1 RP11-644C3.1 chr3 176643941 176867838 - lincRNA NOVEL OTTHUMG00000157301.1 223898 678 5 ENSG00000252302.1 RNA5SP147 chr3 176763233 176763341 + rRNA KNOWN NA 109 109 1 ENSG00000228308.1 LINC01209 chr3 176814155 176817001 - lincRNA NOVEL OTTHUMG00000157300.1 2847 2400 2 ENSG00000183520.10 UTP11L chr1 38009258 38024824 + protein_coding KNOWN OTTHUMG00000004435.1 15567 3385 22 ENSG00000231888.1 MTND5P15 chr3 177010719 177011067 - processed_pseudogene KNOWN OTTHUMG00000157221.1 349 349 1 ENSG00000177565.14 TBL1XR1 chr3 177019355 177197396 - protein_coding KNOWN OTTHUMG00000157140.24 178042 10616 140 ENSG00000231310.3 TBL1XR1-AS1 chr3 177037405 177047923 + antisense NOVEL OTTHUMG00000157220.4 10519 855 6 ENSG00000201343.1 Y_RNA chr3 177120691 177120800 - misc_RNA NOVEL NA 110 110 1 ENSG00000200882.1 RNU6-681P chr3 177126017 177126120 - snRNA KNOWN NA 104 104 1 ENSG00000203645.2 LINC00501 chr3 177294442 177323418 + lincRNA NOVEL OTTHUMG00000157234.1 28977 2046 2 ENSG00000236893.1 ASS1P7 chr3 177297161 177298386 - processed_pseudogene KNOWN OTTHUMG00000157232.1 1226 1226 1 ENSG00000226782.2 RP11-706D8.3 chr3 177337628 177349166 - lincRNA NOVEL OTTHUMG00000157252.1 11539 522 3 ENSG00000228221.4 LINC00578 chr3 177441921 177752305 + lincRNA NOVEL OTTHUMG00000157222.3 310385 1234 11 ENSG00000252028.1 RN7SKP52 chr3 177503303 177503552 - misc_RNA KNOWN NA 250 250 1 ENSG00000185668.6 POU3F1 chr1 38043827 38046794 - protein_coding KNOWN OTTHUMG00000000485.1 2968 2968 1 ENSG00000236385.1 RP11-114M1.2 chr3 177621382 177628287 - lincRNA NOVEL OTTHUMG00000157233.1 6906 723 3 ENSG00000200288.1 SNORA18 chr3 177624282 177624409 - snoRNA NOVEL NA 128 128 1 ENSG00000228561.2 RP11-114M1.1 chr3 177683627 177691250 + lincRNA NOVEL OTTHUMG00000157235.3 7624 587 4 ENSG00000277241.1 RP11-114M1.3 chr3 177700346 177701072 - processed_pseudogene KNOWN OTTHUMG00000187573.1 727 727 1 ENSG00000231574.4 RP11-91K9.1 chr3 177816865 177899224 + lincRNA NOVEL OTTHUMG00000157236.1 82360 3005 6 ENSG00000225790.1 RP11-2L8.1 chr3 177934823 177937662 + lincRNA NOVEL OTTHUMG00000157253.1 2840 560 3 ENSG00000270321.1 RP11-2L8.2 chr3 177954066 177959798 - lincRNA NOVEL OTTHUMG00000185191.1 5733 193 2 ENSG00000199858.1 RNU6-1120P chr3 178007672 178007779 - snRNA KNOWN NA 108 108 1 ENSG00000223930.4 RP11-33A14.1 chr3 178202050 178385417 - lincRNA NOVEL OTTHUMG00000157254.2 183368 2784 14 ENSG00000197584.10 KCNMB2 chr3 178272932 178844429 + protein_coding KNOWN OTTHUMG00000157264.4 571498 3542 44 ENSG00000224592.4 RP5-884C9.2 chr1 38047314 38119025 + lincRNA NOVEL OTTHUMG00000000478.1 71712 684 9 ENSG00000275163.1 KCNMB2 chr3 178419123 178843300 + protein_coding NOVEL OTTHUMG00000186539.1 424178 1391 5 ENSG00000223941.4 LINC01014 chr3 178419201 178457309 + sense_intronic NOVEL OTTHUMG00000157288.1 38109 578 8 ENSG00000252336.1 RNA5SP148 chr3 178429197 178429290 - rRNA KNOWN NA 94 94 1 ENSG00000271131.1 RP11-33A14.3 chr3 178493327 178493810 - processed_pseudogene KNOWN OTTHUMG00000184353.1 484 484 1 ENSG00000237978.4 KCNMB2-AS1 chr3 178526505 178860405 - antisense NOVEL OTTHUMG00000157289.1 333901 1691 27 ENSG00000172667.9 ZMAT3 chr3 179017223 179072279 - protein_coding KNOWN OTTHUMG00000157290.3 55057 9646 17 ENSG00000200616.1 Y_RNA chr3 179097731 179097840 + misc_RNA NOVEL NA 110 110 1 ENSG00000229102.1 RP11-360P21.2 chr3 179101366 179147973 - lincRNA NOVEL OTTHUMG00000157310.1 46608 351 3 ENSG00000121879.3 PIK3CA chr3 179148114 179240093 + protein_coding KNOWN OTTHUMG00000157311.2 91980 9411 31 ENSG00000201957.1 SNORA25 chr3 179169083 179169210 - snoRNA NOVEL NA 128 128 1 ENSG00000223589.2 RP5-884C9.3 chr1 38080572 38080911 - processed_pseudogene KNOWN OTTHUMG00000000480.3 340 340 1 ENSG00000171121.15 KCNMB3 chr3 179236691 179267002 - protein_coding KNOWN OTTHUMG00000157337.4 30312 8979 26 ENSG00000240429.1 LRRFIP1P1 chr3 179259028 179261273 - processed_pseudogene KNOWN OTTHUMG00000157336.1 2246 2246 1 ENSG00000121864.8 ZNF639 chr3 179322991 179338583 + protein_coding KNOWN OTTHUMG00000157439.4 15593 6859 54 ENSG00000260743.1 RP11-255C15.3 chr3 179340322 179341887 + lincRNA NOVEL OTTHUMG00000175849.1 1566 1566 1 ENSG00000171109.17 MFN1 chr3 179347692 179394931 + protein_coding KNOWN OTTHUMG00000157385.5 47240 5957 84 ENSG00000114450.8 GNB4 chr3 179396089 179451590 - protein_coding KNOWN OTTHUMG00000157440.2 55502 7035 34 ENSG00000242539.2 AC007620.3 chr3 179396961 179399191 + antisense NOVEL OTTHUMG00000133759.4 2231 1941 6 ENSG00000272699.1 RP11-145M9.5 chr3 179405448 179405944 + antisense NOVEL OTTHUMG00000186088.1 497 497 1 ENSG00000239255.1 RP11-145M9.2 chr3 179452395 179452419 - processed_pseudogene KNOWN OTTHUMG00000157482.1 25 25 1 ENSG00000181260.8 MTHFD2P7 chr3 179464346 179465328 + processed_pseudogene KNOWN OTTHUMG00000157481.1 983 983 1 ENSG00000265596.1 MIR3659 chr1 38089231 38089329 + miRNA KNOWN NA 99 99 1 ENSG00000136518.15 ACTL6A chr3 179562880 179588408 + protein_coding KNOWN OTTHUMG00000157782.7 25529 3675 87 ENSG00000272910.1 RP11-15L13.4 chr3 179583262 179583762 - antisense NOVEL OTTHUMG00000186089.1 501 501 1 ENSG00000272660.1 RP11-145M9.6 chr3 179584271 179584410 - antisense NOVEL OTTHUMG00000186090.1 140 140 1 ENSG00000136522.12 MRPL47 chr3 179588285 179604654 - protein_coding KNOWN OTTHUMG00000157784.1 16370 1370 20 ENSG00000136521.11 NDUFB5 chr3 179604690 179627647 + protein_coding KNOWN OTTHUMG00000157480.3 22958 5871 69 ENSG00000239096.1 snoU13 chr3 179614775 179614878 - snoRNA NOVEL NA 104 104 1 ENSG00000243977.1 RP11-473P24.2 chr3 179649494 179650200 - processed_pseudogene KNOWN OTTHUMG00000157785.1 707 707 1 ENSG00000058056.7 USP13 chr3 179652755 179789401 + protein_coding KNOWN OTTHUMG00000157783.5 136647 8440 71 ENSG00000114757.17 PEX5L chr3 179794958 180037053 - protein_coding KNOWN OTTHUMG00000157363.5 242096 10236 177 ENSG00000270178.1 RP11-494H4.3 chr3 179804063 179804366 + lincRNA NOVEL OTTHUMG00000183920.1 304 304 1 ENSG00000225285.1 RP4-758J18.10 chr1 1430539 1434573 - lincRNA NOVEL OTTHUMG00000002915.2 4035 851 8 ENSG00000237290.1 LINC01343 chr1 38209034 38214767 - lincRNA NOVEL OTTHUMG00000000479.1 5734 2283 4 ENSG00000243799.1 PEX5L-AS1 chr3 179875376 179881609 + antisense NOVEL OTTHUMG00000157362.1 6234 827 2 ENSG00000244302.1 PEX5L-AS2 chr3 179898229 179921895 + antisense NOVEL OTTHUMG00000157364.1 23667 630 3 ENSG00000201822.1 RNA5SP149 chr3 180161886 180161977 - rRNA KNOWN NA 92 92 1 ENSG00000213158.5 GAPDHP36 chr3 180201136 180213108 + processed_pseudogene KNOWN OTTHUMG00000157862.2 11973 991 2 ENSG00000239880.1 RP11-420J11.1 chr3 180323107 180325059 + processed_pseudogene KNOWN OTTHUMG00000157856.1 1953 1953 1 ENSG00000241696.1 RP11-420J11.2 chr3 180414174 180422506 + lincRNA NOVEL OTTHUMG00000157863.1 8333 940 4 ENSG00000201810.1 U8 chr3 180542701 180542836 + snoRNA NOVEL NA 136 136 1 ENSG00000239774.1 RP11-496B10.3 chr3 180566718 180601935 - lincRNA NOVEL OTTHUMG00000157861.2 35218 563 3 ENSG00000199986.1 RNU6-486P chr3 180581057 180581163 + snRNA KNOWN NA 107 107 1 ENSG00000241946.1 RP11-496B10.1 chr3 180589887 180590047 - processed_pseudogene KNOWN OTTHUMG00000157858.1 161 161 1 ENSG00000275350.1 RP11-329N22.2 chr1 38383838 38384422 - processed_pseudogene KNOWN OTTHUMG00000187523.1 585 585 1 ENSG00000163728.9 TTC14 chr3 180602130 180617828 + protein_coding KNOWN OTTHUMG00000157859.11 15699 7783 77 ENSG00000145075.10 CCDC39 chr3 180602858 180871005 - protein_coding KNOWN OTTHUMG00000157857.4 268148 7695 80 ENSG00000243187.1 CCDC39-AS1 chr3 180680084 180700449 + antisense NOVEL OTTHUMG00000157929.1 20366 283 2 ENSG00000242811.3 RN7SL229P chr3 180736405 180736703 - misc_RNA KNOWN NA 299 299 1 ENSG00000242068.1 RP11-259P15.4 chr3 180772750 180773914 - processed_pseudogene KNOWN OTTHUMG00000157931.1 1165 1165 1 ENSG00000241473.1 RP11-259P15.3 chr3 180820544 180821612 + processed_pseudogene KNOWN OTTHUMG00000157930.1 1069 1069 1 ENSG00000239516.1 FLYWCH1P1 chr3 180827977 180829850 - processed_pseudogene KNOWN OTTHUMG00000157928.1 1874 1874 1 ENSG00000114416.16 FXR1 chr3 180868141 180982753 + protein_coding KNOWN OTTHUMG00000158138.5 114613 12054 189 ENSG00000213157.3 RP11-259P15.1 chr3 180887677 180888075 - processed_pseudogene KNOWN OTTHUMG00000157282.2 399 399 1 ENSG00000205981.5 DNAJC19 chr3 180983709 180989774 - protein_coding KNOWN OTTHUMG00000158180.1 6066 3586 40 ENSG00000200796.1 RNU6-753P chr1 38396659 38396765 + snRNA KNOWN NA 107 107 1 ENSG00000242808.6 SOX2-OT chr3 180989770 181836880 + sense_overlapping KNOWN OTTHUMG00000158186.4 847111 11874 214 ENSG00000242140.1 RP11-262M14.2 chr3 181146233 181146463 + processed_pseudogene KNOWN OTTHUMG00000158187.1 231 231 1 ENSG00000206932.1 RNU6-4P chr3 181231737 181231843 + snRNA KNOWN NA 107 107 1 ENSG00000237806.1 FAUP2 chr3 181242345 181242901 - processed_pseudogene KNOWN OTTHUMG00000157271.1 557 401 2 ENSG00000241231.1 RP11-275H4.1 chr3 181421058 181442486 - lincRNA NOVEL OTTHUMG00000158223.1 21429 865 5 ENSG00000235294.1 RPL7AP25 chr3 181505075 181505879 - processed_pseudogene KNOWN OTTHUMG00000157270.1 805 805 1 ENSG00000239381.4 RP11-4B14.3 chr3 181534177 181535881 - lincRNA NOVEL OTTHUMG00000158224.1 1705 818 7 ENSG00000276074.1 SOX2OT_exon1 chr3 181610498 181610729 + misc_RNA NOVEL NA 232 232 1 ENSG00000276690.1 SOX2OT_exon3 chr3 181699608 181699883 + misc_RNA NOVEL NA 276 276 1 ENSG00000281596.1 AC117415.1 chr3 181699705 181699783 + miRNA NOVEL NA 79 79 1 ENSG00000238063.1 RP11-329N22.1 chr1 38475196 38476484 + lincRNA NOVEL OTTHUMG00000000481.1 1289 790 3 ENSG00000181449.3 SOX2 chr3 181711924 181714436 + protein_coding KNOWN OTTHUMG00000158222.1 2513 2513 1 ENSG00000278026.1 SOX2OT_exon4 chr3 181715185 181715293 + misc_RNA NOVEL NA 109 109 1 ENSG00000266317.2 RN7SL703P chr3 181813401 181813702 + misc_RNA KNOWN NA 302 302 1 ENSG00000199839.1 RNA5SP150 chr3 181822872 181822990 - rRNA KNOWN NA 119 119 1 ENSG00000239805.1 RP11-252O18.2 chr3 181847526 181847885 - processed_pseudogene KNOWN OTTHUMG00000158237.1 360 360 1 ENSG00000213155.4 RP11-252O18.3 chr3 181866351 181867154 - processed_pseudogene KNOWN OTTHUMG00000158240.1 804 490 2 ENSG00000242512.7 LINC01206 chr3 181952343 182010678 + lincRNA NOVEL OTTHUMG00000158238.6 58336 14145 158 ENSG00000252257.1 RN7SKP265 chr3 181968459 181968681 + misc_RNA KNOWN NA 223 223 1 ENSG00000240478.1 RP11-416O18.2 chr3 182121884 182142137 + lincRNA NOVEL OTTHUMG00000158236.1 20254 477 2 ENSG00000242012.1 RP11-338L18.1 chr3 182365147 182368256 + lincRNA NOVEL OTTHUMG00000158300.1 3110 328 2 ENSG00000215895.4 RP11-334L9.1 chr1 38708931 38710890 + processed_pseudogene KNOWN OTTHUMG00000000483.3 1960 1960 1 ENSG00000241098.1 FLJ46066 chr3 182446970 182486364 - lincRNA NOVEL OTTHUMG00000158294.1 39395 1808 4 ENSG00000244199.1 EIF4EP3 chr3 182460417 182461072 - processed_pseudogene KNOWN OTTHUMG00000158292.1 656 656 1 ENSG00000244247.1 RP11-139K4.2 chr3 182498264 182507124 - lincRNA NOVEL OTTHUMG00000158301.1 8861 621 4 ENSG00000228766.3 RPL7L1P8 chr3 182610674 182611414 + processed_pseudogene KNOWN OTTHUMG00000158298.1 741 741 1 ENSG00000238837.3 RP11-646E18.2 chr3 182644214 182655880 + lincRNA NOVEL OTTHUMG00000158297.2 11667 592 5 ENSG00000243378.1 RP11-646E18.3 chr3 182691928 182692285 + processed_pseudogene KNOWN OTTHUMG00000158293.1 358 358 1 ENSG00000260377.1 RP11-646E18.4 chr3 182739669 182740848 - lincRNA NOVEL OTTHUMG00000175856.1 1180 1180 1 ENSG00000240063.1 RP11-225N10.1 chr3 182783236 182793394 - antisense NOVEL OTTHUMG00000158299.1 10159 1877 2 ENSG00000058063.14 ATP11B chr3 182793500 182921635 + protein_coding KNOWN OTTHUMG00000158295.2 128136 9196 116 ENSG00000270554.1 RP11-225N10.3 chr3 182843521 182844619 - processed_pseudogene KNOWN OTTHUMG00000184352.1 1099 1099 1 ENSG00000116954.7 RRAGC chr1 38838198 38859823 - protein_coding KNOWN OTTHUMG00000000490.2 21626 5167 16 ENSG00000273261.1 RP11-531F16.4 chr3 182921240 182921938 - antisense NOVEL OTTHUMG00000186091.1 699 699 1 ENSG00000043093.12 DCUN1D1 chr3 182938074 182985953 - protein_coding KNOWN OTTHUMG00000158314.2 47880 8412 37 ENSG00000244346.1 RP11-531F16.3 chr3 182950783 182956307 - processed_pseudogene KNOWN OTTHUMG00000158319.1 5525 543 4 ENSG00000078070.10 MCCC1 chr3 183015218 183116075 - protein_coding KNOWN OTTHUMG00000158355.2 100858 4321 191 ENSG00000243368.2 MCCC1-AS1 chr3 183016255 183017808 + antisense NOVEL OTTHUMG00000158356.2 1554 765 2 ENSG00000078081.6 LAMP3 chr3 183122213 183163839 - protein_coding KNOWN OTTHUMG00000158387.1 41627 3816 22 ENSG00000053524.10 MCF2L2 chr3 183178043 183428778 - protein_coding KNOWN OTTHUMG00000158388.1 250736 20568 158 ENSG00000176597.10 B3GNT5 chr3 183253244 183298504 + protein_coding KNOWN OTTHUMG00000158436.1 45261 8140 28 ENSG00000202502.1 RNA5SP151 chr3 183258300 183258416 - rRNA KNOWN NA 117 117 1 ENSG00000240024.4 LINC00888 chr3 183447608 183456013 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000158437.1 8406 2131 14 ENSG00000273637.1 RP5-864K19.7 chr1 38839333 38874494 - processed_transcript NOVEL OTTHUMG00000188957.1 35162 2171 12 ENSG00000201229.1 SNORA63 chr3 183451857 183451988 + snoRNA NOVEL NA 132 132 1 ENSG00000253092.1 SNORA81 chr3 183452567 183452764 + snoRNA NOVEL NA 198 198 1 ENSG00000199363.1 SNORA63 chr3 183453814 183453944 + snoRNA NOVEL NA 131 131 1 ENSG00000251730.1 SNORA4 chr3 183454128 183454262 + snoRNA NOVEL NA 135 135 1 ENSG00000271682.1 RP11-393B14.2 chr3 183462851 183463201 - processed_pseudogene KNOWN OTTHUMG00000184349.1 351 351 1 ENSG00000172578.10 KLHL6 chr3 183487531 183555689 - protein_coding KNOWN OTTHUMG00000148673.2 68159 10546 23 ENSG00000242522.1 KLHL6-AS1 chr3 183548735 183552326 + antisense NOVEL OTTHUMG00000158438.1 3592 503 2 ENSG00000243584.1 RP11-14I2.2 chr3 183613620 183616742 + processed_pseudogene KNOWN OTTHUMG00000158085.1 3123 2426 3 ENSG00000114796.14 KLHL24 chr3 183635568 183684477 + protein_coding KNOWN OTTHUMG00000156911.4 48910 8650 58 ENSG00000163872.14 YEATS2 chr3 183697818 183812625 + protein_coding KNOWN OTTHUMG00000156898.2 114808 10212 49 ENSG00000228436.2 RP5-864K19.4 chr1 38860000 38919396 + antisense NOVEL OTTHUMG00000000491.2 59397 976 8 ENSG00000216166.1 AC131160.1 chr3 183802475 183802553 - miRNA NOVEL NA 79 79 1 ENSG00000276325.1 AC131160.2 chr3 183806156 183806204 + miRNA NOVEL NA 49 49 1 ENSG00000233885.6 YEATS2-AS1 chr3 183806457 183810783 - antisense NOVEL OTTHUMG00000156899.4 4327 3271 10 ENSG00000180834.6 MAP6D1 chr3 183815876 183825594 - protein_coding KNOWN OTTHUMG00000156900.1 9719 2408 11 ENSG00000175193.11 PARL chr3 183829385 183884933 - protein_coding KNOWN OTTHUMG00000156890.1 55549 2034 63 ENSG00000234371.6 RPSAP31 chr3 183884924 183888449 + transcribed_processed_pseudogene KNOWN OTTHUMG00000156888.1 3526 1179 3 ENSG00000263932.1 MIR4448 chr3 183886800 183886885 + miRNA KNOWN NA 86 86 1 ENSG00000233441.5 CYP2AB1P chr3 183895900 183910936 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156889.2 15037 1831 14 ENSG00000114770.15 ABCC5 chr3 183919934 184018015 - protein_coding KNOWN OTTHUMG00000156871.1 98082 11441 141 ENSG00000223882.1 ABCC5-AS1 chr3 184006338 184011419 + antisense NOVEL OTTHUMG00000156870.1 5082 469 3 ENSG00000214114.7 MYCBP chr1 38862964 38874105 - protein_coding KNOWN OTTHUMG00000000484.7 11142 3039 17 ENSG00000223529.1 EEF1A1P8 chr3 184026369 184027756 - processed_pseudogene KNOWN OTTHUMG00000156863.1 1388 1388 1 ENSG00000186090.9 HTR3D chr3 184031544 184039369 + protein_coding KNOWN OTTHUMG00000156858.2 7826 2068 26 ENSG00000178084.1 HTR3C chr3 184053047 184060671 + protein_coding KNOWN OTTHUMG00000156862.1 7625 1697 9 ENSG00000233576.1 RP11-778D9.9 chr3 184076779 184084219 + unprocessed_pseudogene KNOWN OTTHUMG00000156860.1 7441 1057 9 ENSG00000207351.1 Y_RNA chr3 184086791 184086903 - misc_RNA NOVEL NA 113 113 1 ENSG00000238020.1 HTR3E-AS1 chr3 184095118 184105178 - antisense NOVEL OTTHUMG00000156861.1 10061 515 3 ENSG00000186038.8 HTR3E chr3 184097064 184106995 + protein_coding KNOWN OTTHUMG00000156857.1 9932 2523 45 ENSG00000205955.4 HSP90AA5P chr3 184115352 184117898 + transcribed_processed_pseudogene KNOWN OTTHUMG00000156859.1 2547 2192 2 ENSG00000273181.1 RP11-778D9.13 chr3 184132942 184133561 - lincRNA NOVEL OTTHUMG00000186108.1 620 620 1 ENSG00000272721.4 RP11-778D9.12 chr3 184134019 184135238 - antisense NOVEL OTTHUMG00000186109.1 1220 386 6 ENSG00000274944.3 RP5-864K19.6 chr1 38864501 38881617 - protein_coding NOVEL OTTHUMG00000187290.1 17117 3251 21 ENSG00000145191.10 EIF2B5 chr3 184135038 184684758 + protein_coding KNOWN OTTHUMG00000156840.2 549721 5975 108 ENSG00000228205.1 RP11-778D9.4 chr3 184149704 184150435 + processed_pseudogene KNOWN OTTHUMG00000156842.1 732 732 1 ENSG00000161202.16 DVL3 chr3 184155388 184173610 + protein_coding KNOWN OTTHUMG00000156841.2 18223 6090 66 ENSG00000161203.12 AP2M1 chr3 184174689 184184091 + protein_coding KNOWN OTTHUMG00000156822.18 9403 4756 131 ENSG00000161204.10 ABCF3 chr3 184186023 184194012 + protein_coding KNOWN OTTHUMG00000156824.1 7990 5207 141 ENSG00000145198.13 VWA5B2 chr3 184230429 184242329 + protein_coding KNOWN OTTHUMG00000156820.2 11901 5730 60 ENSG00000221120.1 MIR1224 chr3 184241405 184241489 + miRNA KNOWN NA 85 85 1 ENSG00000214160.8 ALG3 chr3 184242301 184249548 - protein_coding KNOWN OTTHUMG00000156823.2 7248 3464 75 ENSG00000145194.16 ECE2 chr3 184249650 184293031 + protein_coding KNOWN OTTHUMG00000150551.4 43382 6552 135 ENSG00000163888.3 CAMK2N2 chr3 184259213 184261463 - protein_coding KNOWN OTTHUMG00000156821.1 2251 1362 2 ENSG00000179403.11 VWA1 chr1 1434861 1442882 + protein_coding KNOWN OTTHUMG00000002975.3 8022 5065 10 ENSG00000131233.9 GJA9 chr1 38874451 38881587 - protein_coding KNOWN OTTHUMG00000000482.2 7137 2057 3 ENSG00000175166.15 PSMD2 chr3 184298709 184309054 + protein_coding KNOWN OTTHUMG00000156796.3 10346 5453 131 ENSG00000114867.18 EIF4G1 chr3 184314495 184335358 + protein_coding KNOWN OTTHUMG00000156784.20 20864 8257 635 ENSG00000212158.1 SNORD66 chr3 184325696 184325771 + snoRNA KNOWN NA 76 76 1 ENSG00000175182.12 FAM131A chr3 184335926 184346275 + protein_coding KNOWN OTTHUMG00000156206.18 10350 6597 47 ENSG00000114859.13 CLCN2 chr3 184346185 184361651 - protein_coding KNOWN OTTHUMG00000156747.1 15467 4290 127 ENSG00000163882.8 POLR2H chr3 184361718 184368596 + protein_coding KNOWN OTTHUMG00000156746.1 6879 3146 50 ENSG00000090534.16 THPO chr3 184371935 184378144 - protein_coding KNOWN OTTHUMG00000156745.2 6210 1915 21 ENSG00000090539.14 CHRD chr3 184380073 184390736 + protein_coding KNOWN OTTHUMG00000141267.2 10664 6620 194 ENSG00000224153.2 RP11-433C9.2 chr3 184401537 184439648 + lincRNA NOVEL OTTHUMG00000156732.2 38112 1158 6 ENSG00000227509.1 EIF2B5-IT1 chr3 184505113 184508399 + sense_intronic NOVEL OTTHUMG00000156714.1 3287 727 2 ENSG00000158315.9 RHBDL2 chr1 38885807 38941799 - protein_coding KNOWN OTTHUMG00000000487.2 55993 2795 19 ENSG00000230215.1 EIF2B5-AS1 chr3 184546714 184556918 - antisense NOVEL OTTHUMG00000156713.1 10205 571 2 ENSG00000182580.2 EPHB3 chr3 184561784 184582409 + protein_coding KNOWN OTTHUMG00000156710.1 20626 4532 20 ENSG00000177383.4 MAGEF1 chr3 184710367 184712002 - protein_coding KNOWN OTTHUMG00000156712.1 1636 1636 1 ENSG00000272970.1 RP11-329B9.4 chr3 184734075 184738949 + lincRNA NOVEL OTTHUMG00000186127.1 4875 701 3 ENSG00000273403.1 RP11-329B9.3 chr3 184741937 184742462 + lincRNA NOVEL OTTHUMG00000186128.1 526 526 1 ENSG00000272922.1 RP11-329B9.5 chr3 184742818 184743284 + lincRNA NOVEL OTTHUMG00000186129.1 467 467 1 ENSG00000229433.1 RP11-329B9.1 chr3 184756389 184773155 - lincRNA NOVEL OTTHUMG00000156711.1 16767 2591 3 ENSG00000156931.14 VPS8 chr3 184812143 185052614 + protein_coding KNOWN OTTHUMG00000156707.9 240472 10366 323 ENSG00000187068.2 C3orf70 chr3 185078050 185153014 - protein_coding KNOWN OTTHUMG00000156696.1 74965 5901 2 ENSG00000223358.4 EHHADH-AS1 chr3 185162871 185191955 + antisense NOVEL OTTHUMG00000156697.1 29085 1632 11 ENSG00000199963.1 RNU6-605P chr1 38926870 38926977 + snRNA KNOWN NA 108 108 1 ENSG00000113790.9 EHHADH chr3 185190624 185281990 - protein_coding KNOWN OTTHUMG00000156698.1 91367 4700 27 ENSG00000229704.1 EIF2S2P2 chr3 185245460 185246441 - processed_pseudogene KNOWN OTTHUMG00000156699.1 982 982 1 ENSG00000264614.1 MIR5588 chr3 185253210 185253272 - miRNA KNOWN NA 63 63 1 ENSG00000073803.12 MAP3K13 chr3 185282941 185489097 + protein_coding KNOWN OTTHUMG00000156673.6 206157 12623 103 ENSG00000229638.1 RPL4P4 chr3 185417495 185418778 - processed_pseudogene KNOWN OTTHUMG00000156700.1 1284 1284 1 ENSG00000163900.9 TMEM41A chr3 185476496 185499057 - protein_coding KNOWN OTTHUMG00000156660.1 22562 8668 27 ENSG00000163898.8 LIPH chr3 185506262 185552613 - protein_coding KNOWN OTTHUMG00000156657.1 46352 4122 29 ENSG00000163904.11 SENP2 chr3 185582496 185633551 + protein_coding KNOWN OTTHUMG00000156658.1 51056 7169 90 ENSG00000236489.1 RP11-537I16.2 chr3 185606575 185606873 + processed_pseudogene KNOWN OTTHUMG00000156659.2 299 299 1 ENSG00000073792.14 IGF2BP2 chr3 185643739 185825056 - protein_coding KNOWN OTTHUMG00000074025.3 181318 4735 91 ENSG00000207466.1 Y_RNA chr1 38950825 38950925 - misc_RNA NOVEL NA 101 101 1 ENSG00000163915.6 IGF2BP2-AS1 chr3 185712528 185729787 + antisense KNOWN OTTHUMG00000156643.1 17260 3415 19 ENSG00000265470.1 MIR548AQ chr3 185767847 185767904 - miRNA KNOWN NA 58 58 1 ENSG00000136527.16 TRA2B chr3 185915906 185938136 - protein_coding KNOWN OTTHUMG00000156641.1 22231 11769 86 ENSG00000171658.7 RP11-443P15.2 chr3 185959943 185980872 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156640.2 20930 2628 25 ENSG00000244405.6 ETV5 chr3 186046308 186110318 - protein_coding KNOWN OTTHUMG00000156639.3 64011 5802 83 ENSG00000277118.1 Metazoa_SRP chr3 186076306 186076591 - misc_RNA NOVEL NA 286 286 1 ENSG00000234197.1 ETV5-AS1 chr3 186079170 186080947 + antisense NOVEL OTTHUMG00000156638.1 1778 560 2 ENSG00000058866.13 DGKG chr3 186105668 186362237 - protein_coding KNOWN OTTHUMG00000156617.5 256570 10978 123 ENSG00000234548.4 RP11-78H24.1 chr3 186440345 186450696 + lincRNA NOVEL OTTHUMG00000156616.1 10352 1165 12 ENSG00000224406.4 RP11-48F14.1 chr3 186454982 186493661 - lincRNA NOVEL OTTHUMG00000156618.1 38680 2692 18 ENSG00000235549.1 EIF1P2 chr1 38958275 38958925 - processed_pseudogene KNOWN OTTHUMG00000007495.2 651 350 2 ENSG00000226859.1 RP11-48F14.2 chr3 186476727 186478370 + lincRNA NOVEL OTTHUMG00000156619.1 1644 690 2 ENSG00000213139.6 CRYGS chr3 186538441 186546702 - protein_coding KNOWN OTTHUMG00000156615.1 8262 2151 9 ENSG00000113838.11 TBCCD1 chr3 186546073 186570543 - protein_coding KNOWN OTTHUMG00000156613.1 24471 3405 31 ENSG00000090520.9 DNAJB11 chr3 186567403 186597203 + protein_coding KNOWN OTTHUMG00000156614.1 29801 5959 37 ENSG00000197099.7 RP11-573D15.8 chr3 186579476 186772986 - antisense NOVEL OTTHUMG00000156574.8 193511 11099 220 ENSG00000145192.11 AHSG chr3 186612923 186621318 + protein_coding KNOWN OTTHUMG00000156605.1 8396 2353 18 ENSG00000275696.1 Metazoa_SRP chr3 186629936 186630211 - misc_RNA NOVEL NA 276 276 1 ENSG00000090512.10 FETUB chr3 186635969 186653141 + protein_coding KNOWN OTTHUMG00000156586.1 17173 2024 45 ENSG00000113905.4 HRG chr3 186660216 186678240 + protein_coding KNOWN OTTHUMG00000156578.3 18025 5061 15 ENSG00000225175.1 RP11-795A2.2 chr3 186687329 186692506 + unprocessed_pseudogene KNOWN OTTHUMG00000156579.1 5178 1344 4 ENSG00000174574.14 AKIRIN1 chr1 38991223 39006059 + protein_coding KNOWN OTTHUMG00000007496.2 14837 2741 17 ENSG00000226724.1 RP11-795A2.3 chr3 186698520 186708574 + unprocessed_pseudogene KNOWN OTTHUMG00000156577.1 10055 845 6 ENSG00000113889.10 KNG1 chr3 186717276 186743954 + protein_coding KNOWN OTTHUMG00000150348.3 26679 3740 31 ENSG00000226652.2 PSMD10P2 chr3 186760693 186762050 + transcribed_processed_pseudogene KNOWN OTTHUMG00000156575.2 1358 1087 6 ENSG00000207505.1 RNU6-1105P chr3 186771841 186771947 - snRNA KNOWN NA 107 107 1 ENSG00000230951.1 GPS2P2 chr3 186772589 186773476 + processed_pseudogene KNOWN OTTHUMG00000156576.1 888 888 1 ENSG00000263826.1 RP11-573D15.9 chr3 186781780 186784179 - antisense NOVEL OTTHUMG00000178374.1 2400 2400 1 ENSG00000156976.13 EIF4A2 chr3 186783205 186789900 + protein_coding KNOWN OTTHUMG00000156564.2 6696 6133 138 ENSG00000238942.1 SNORD2 chr3 186784796 186784864 + snoRNA KNOWN NA 69 69 1 ENSG00000200418.1 SNORA63 chr3 186786323 186786445 + snoRNA NOVEL NA 123 123 1 ENSG00000281017.1 MIR1248 chr3 186786672 186786777 + miRNA KNOWN NA 106 106 1 ENSG00000168653.9 NDUFS5 chr1 39026318 39034636 + protein_coding KNOWN OTTHUMG00000007497.1 8319 548 6 ENSG00000221420.2 SNORA81 chr3 186786675 186786852 + snoRNA KNOWN NA 178 178 1 ENSG00000200320.1 SNORA63 chr3 186787300 186787431 + snoRNA KNOWN NA 132 132 1 ENSG00000263776.1 SNORA4 chr3 186787612 186787749 + snoRNA KNOWN NA 138 138 1 ENSG00000163918.9 RFC4 chr3 186789880 186807058 - protein_coding KNOWN OTTHUMG00000156515.7 17179 2997 87 ENSG00000231724.1 RP11-573D15.3 chr3 186807692 186818121 + antisense NOVEL OTTHUMG00000156519.1 10430 540 2 ENSG00000232233.1 RP11-573D15.2 chr3 186810880 186825521 - lincRNA NOVEL OTTHUMG00000156520.1 14642 1832 4 ENSG00000231982.1 RP11-573D15.1 chr3 186826549 186827337 + unprocessed_pseudogene KNOWN OTTHUMG00000156518.1 789 330 3 ENSG00000181092.8 ADIPOQ chr3 186842690 186858463 + protein_coding KNOWN OTTHUMG00000156521.2 15774 4613 7 ENSG00000226482.1 ADIPOQ-AS1 chr3 186851886 186856123 - antisense NOVEL OTTHUMG00000156514.1 4238 3443 3 ENSG00000223803.1 RPS20P14 chr3 186900198 186900557 + processed_pseudogene KNOWN OTTHUMG00000156517.1 360 360 1 ENSG00000127603.22 MACF1 chr1 39081316 39487177 + protein_coding KNOWN OTTHUMG00000007754.12 405862 43102 758 ENSG00000233565.1 RP11-42D20.1 chr3 186922286 186922753 - processed_pseudogene KNOWN OTTHUMG00000156516.1 468 468 1 ENSG00000073849.13 ST6GAL1 chr3 186930485 187078553 + protein_coding KNOWN OTTHUMG00000156500.1 148069 9151 90 ENSG00000163923.8 RPL39L chr3 187120948 187180908 - protein_coding KNOWN OTTHUMG00000156465.2 59961 1060 9 ENSG00000198491.3 RP11-208N14.4 chr3 187197090 187207629 - antisense NOVEL OTTHUMG00000156463.1 10540 2674 5 ENSG00000175077.5 RTP1 chr3 187197486 187201465 + protein_coding KNOWN OTTHUMG00000149886.2 3980 2217 2 ENSG00000127241.15 MASP1 chr3 187217285 187292022 - protein_coding KNOWN OTTHUMG00000156461.3 74738 13161 90 ENSG00000136514.2 RTP4 chr3 187368332 187372076 + protein_coding KNOWN OTTHUMG00000156459.1 3745 1554 2 ENSG00000280270.1 RP11-560F18.1 chr3 187383101 187384849 + TEC KNOWN OTTHUMG00000175857.1 1749 1749 1 ENSG00000239093.1 snoU13 chr3 187423315 187423419 + snoRNA NOVEL NA 105 105 1 ENSG00000228952.1 RP11-567G11.1 chr3 187448845 187449450 + lincRNA NOVEL OTTHUMG00000156460.1 606 246 2 ENSG00000206654.1 RNU6-608P chr1 39120940 39121043 - snRNA KNOWN NA 104 104 1 ENSG00000157005.3 SST chr3 187668906 187670399 - protein_coding KNOWN OTTHUMG00000156462.1 1494 618 2 ENSG00000198471.1 RTP2 chr3 187698259 187702557 - protein_coding KNOWN OTTHUMG00000156458.1 4299 1346 2 ENSG00000228804.4 RP11-211G3.3 chr3 187702313 187733849 + antisense NOVEL OTTHUMG00000156439.2 31537 717 6 ENSG00000113916.16 BCL6 chr3 187721377 187745727 - protein_coding KNOWN OTTHUMG00000156441.2 24351 5938 64 ENSG00000223401.1 RP11-211G3.2 chr3 187743686 187745420 + lincRNA NOVEL OTTHUMG00000156440.1 1735 536 2 ENSG00000224049.1 RP11-30O15.1 chr3 187796187 187805258 + lincRNA NOVEL OTTHUMG00000156394.1 9072 778 5 ENSG00000236864.1 RP11-44H4.1 chr3 187932764 187946221 - lincRNA NOVEL OTTHUMG00000156392.1 13458 153 2 ENSG00000224187.1 RP11-132N15.3 chr3 187958775 187976407 - lincRNA NOVEL OTTHUMG00000156391.1 17633 1713 4 ENSG00000225058.1 RP11-132N15.1 chr3 187997422 188003990 - lincRNA NOVEL OTTHUMG00000156396.1 6569 427 2 ENSG00000236412.1 RP11-132N15.2 chr3 188001700 188003406 - lincRNA NOVEL OTTHUMG00000156393.1 1707 1008 2 ENSG00000222378.1 RNA5SP44 chr1 39154164 39154296 - rRNA KNOWN NA 133 133 1 ENSG00000234238.1 RP11-430L16.1 chr3 188107096 188147020 + lincRNA NOVEL OTTHUMG00000156395.1 39925 696 2 ENSG00000270959.1 LPP-AS2 chr3 188151206 188154057 - antisense KNOWN OTTHUMG00000185119.1 2852 2852 1 ENSG00000145012.11 LPP chr3 188153284 188890671 + protein_coding KNOWN OTTHUMG00000156387.3 737388 25535 88 ENSG00000279891.1 FLJ42393 chr3 188178543 188180812 + TEC KNOWN OTTHUMG00000187182.1 2270 2270 1 ENSG00000276242.1 AC117507.1 chr3 188236130 188236238 - miRNA NOVEL NA 109 109 1 ENSG00000224563.1 LPP-AS1 chr3 188562238 188568666 - antisense NOVEL OTTHUMG00000156388.1 6429 494 2 ENSG00000264114.1 AC063932.1 chr3 188630641 188630702 - miRNA NOVEL NA 62 62 1 ENSG00000207651.1 MIR28 chr3 188688781 188688866 + miRNA KNOWN NA 86 86 1 ENSG00000234076.1 TPRG1-AS1 chr3 188941715 188947639 - lincRNA NOVEL OTTHUMG00000156324.1 5925 697 2 ENSG00000188001.8 TPRG1 chr3 188947214 189325304 + protein_coding KNOWN OTTHUMG00000156321.4 378091 9535 66 ENSG00000215915.8 ATAD3C chr1 1449689 1470158 + protein_coding KNOWN OTTHUMG00000000531.6 20470 3976 20 ENSG00000270040.1 RP11-416A14.1 chr1 39206512 39206957 + sense_intronic NOVEL OTTHUMG00000184011.1 446 446 1 ENSG00000236182.1 RP11-297K7.1 chr3 188989382 188990135 - processed_pseudogene KNOWN OTTHUMG00000156322.1 754 754 1 ENSG00000230115.1 TPRG1-AS2 chr3 189238686 189240594 - antisense NOVEL OTTHUMG00000156323.1 1909 479 3 ENSG00000073282.11 TP63 chr3 189631416 189897279 + protein_coding KNOWN OTTHUMG00000156313.1 265864 7454 144 ENSG00000227971.1 RP11-600G3.1 chr3 189645327 189645466 - processed_pseudogene KNOWN OTTHUMG00000156316.1 140 140 1 ENSG00000216058.1 MIR944 chr3 189829922 189830009 + miRNA KNOWN NA 88 88 1 ENSG00000090530.8 P3H2 chr3 189956728 190122437 - protein_coding KNOWN OTTHUMG00000156312.4 165710 5605 57 ENSG00000230077.1 MTAPP2 chr3 189969030 189969861 - processed_pseudogene KNOWN OTTHUMG00000156314.1 832 832 1 ENSG00000225764.1 P3H2-AS1 chr3 190120964 190144846 + antisense NOVEL OTTHUMG00000156311.1 23883 730 4 ENSG00000252733.1 AC067718.1 chr3 190143656 190143743 + miRNA NOVEL NA 88 88 1 ENSG00000212489.1 RNU6-1109P chr3 190165417 190165523 - snRNA KNOWN NA 107 107 1 ENSG00000226438.1 RP11-420K8.1 chr1 39249838 39257649 - antisense NOVEL OTTHUMG00000008348.1 7812 558 3 ENSG00000238077.1 NMNAT1P3 chr3 190166764 190167651 + processed_pseudogene KNOWN OTTHUMG00000156232.1 888 888 1 ENSG00000163347.5 CLDN1 chr3 190305701 190322475 - protein_coding KNOWN OTTHUMG00000156214.2 16775 3663 6 ENSG00000113946.3 CLDN16 chr3 190322541 190412143 + protein_coding KNOWN OTTHUMG00000156215.1 89603 3583 12 ENSG00000198398.2 TMEM207 chr3 190428655 190449876 - protein_coding KNOWN OTTHUMG00000156213.1 21222 1448 5 ENSG00000196083.8 IL1RAP chr3 190514051 190659750 + protein_coding KNOWN OTTHUMG00000156211.2 145700 11558 137 ENSG00000231047.1 GCNT1P3 chr3 190624595 190625169 + processed_pseudogene KNOWN OTTHUMG00000156212.1 575 575 1 ENSG00000223117.1 RN7SKP296 chr3 190642163 190642503 + misc_RNA KNOWN NA 341 341 1 ENSG00000273370.1 RP11-268E23.2 chr3 190659216 190659750 + lincRNA NOVEL OTTHUMG00000186135.1 535 535 1 ENSG00000228730.1 RP11-95L3.2 chr3 190697923 190698848 - lincRNA NOVEL OTTHUMG00000156193.1 926 526 2 ENSG00000232610.1 CCT6P4 chr3 190714811 190716399 + processed_pseudogene KNOWN OTTHUMG00000156191.1 1589 1589 1 ENSG00000217897.2 HSPE1P8 chr1 39304294 39304898 - processed_pseudogene KNOWN OTTHUMG00000008349.1 605 288 2 ENSG00000214147.2 RP11-332P22.2 chr3 190830965 190832173 + processed_pseudogene KNOWN OTTHUMG00000156194.1 1209 1209 1 ENSG00000205835.7 GMNC chr3 190852877 190892429 - protein_coding KNOWN OTTHUMG00000156195.1 39553 3804 16 ENSG00000188729.5 OSTN chr3 191199241 191265615 + protein_coding KNOWN OTTHUMG00000156190.1 66375 3219 7 ENSG00000233308.1 OSTN-AS1 chr3 191213291 191234605 - antisense NOVEL OTTHUMG00000156189.1 21315 515 6 ENSG00000188958.8 UTS2B chr3 191267168 191330536 - protein_coding KNOWN OTTHUMG00000156192.1 63369 3850 46 ENSG00000152492.12 CCDC50 chr3 191329077 191398670 + protein_coding KNOWN OTTHUMG00000156177.1 69594 9202 25 ENSG00000253548.1 PYDC2 chr3 191461163 191461456 + protein_coding KNOWN OTTHUMG00000156167.2 294 294 1 ENSG00000223812.4 RP11-197K6.1 chr3 191557324 191590356 + lincRNA NOVEL OTTHUMG00000156168.1 33033 1009 7 ENSG00000201860.1 Y_RNA chr3 191641135 191641237 + misc_RNA NOVEL NA 103 103 1 ENSG00000280857.1 Y_RNA chr3 191641329 191641424 - misc_RNA NOVEL NA 96 96 1 ENSG00000183682.7 BMP8A chr1 39491646 39525935 + protein_coding KNOWN OTTHUMG00000008394.1 34290 1692 7 ENSG00000237653.2 RP11-655G22.2 chr3 191952349 191952826 - processed_pseudogene KNOWN OTTHUMG00000156147.1 478 478 1 ENSG00000232353.4 RP11-655G22.1 chr3 192029880 192036557 + lincRNA NOVEL OTTHUMG00000156146.1 6678 903 8 ENSG00000222583.1 RN7SKP222 chr3 192093122 192093436 + misc_RNA KNOWN NA 315 315 1 ENSG00000114279.12 FGF12 chr3 192139395 192767764 - protein_coding KNOWN OTTHUMG00000156132.4 628370 7355 39 ENSG00000231383.2 FGF12-AS1 chr3 192238037 192283097 + antisense NOVEL OTTHUMG00000156141.2 45061 1080 8 ENSG00000230126.1 FGF12-AS2 chr3 192515022 192516573 + antisense NOVEL OTTHUMG00000156143.1 1552 580 2 ENSG00000226709.1 FGF12-AS3 chr3 192516831 192521398 + antisense NOVEL OTTHUMG00000156142.1 4568 291 2 ENSG00000238902.1 snoU13 chr3 192534009 192534112 - snoRNA NOVEL NA 104 104 1 ENSG00000200184.1 RNU1-20P chr3 192729555 192729716 - snRNA KNOWN NA 162 162 1 ENSG00000180611.6 MB21D2 chr3 192796815 192918161 - protein_coding KNOWN OTTHUMG00000155768.1 121347 3368 2 ENSG00000237624.1 OXCT2P1 chr1 39514956 39516490 + unprocessed_pseudogene KNOWN OTTHUMG00000009250.1 1535 1535 1 ENSG00000232130.1 RP11-143P4.2 chr3 193144464 193176864 - lincRNA NOVEL OTTHUMG00000156107.1 32401 526 3 ENSG00000236229.1 VEZF1P1 chr3 193155456 193157208 - processed_pseudogene KNOWN OTTHUMG00000156103.1 1753 1541 2 ENSG00000127252.5 HRASLS chr3 193241125 193277738 + protein_coding KNOWN OTTHUMG00000156104.2 36614 1169 7 ENSG00000187527.9 ATP13A5 chr3 193274790 193378843 - protein_coding KNOWN OTTHUMG00000156101.1 104054 6228 56 ENSG00000236508.1 ATP13A5-AS1 chr3 193307244 193314362 + antisense NOVEL OTTHUMG00000156106.1 7119 476 2 ENSG00000127249.13 ATP13A4 chr3 193402077 193593111 - protein_coding KNOWN OTTHUMG00000074067.6 191035 6013 168 ENSG00000225473.1 ATP13A4-AS1 chr3 193553213 193555088 + antisense NOVEL OTTHUMG00000156102.1 1876 1046 5 ENSG00000236297.1 RP11-175P19.2 chr3 193578812 193593090 - transcribed_processed_pseudogene KNOWN OTTHUMG00000156105.1 14279 924 4 ENSG00000198836.7 OPA1 chr3 193593144 193697823 + protein_coding KNOWN OTTHUMG00000149897.5 104680 8448 247 ENSG00000224855.4 OPA1-AS1 chr3 193618609 193627337 - antisense NOVEL OTTHUMG00000156072.1 8729 497 5 ENSG00000182109.6 RP11-69E11.4 chr1 39522280 39546187 - antisense NOVEL OTTHUMG00000008392.3 23908 3059 25 ENSG00000207370.1 Y_RNA chr3 193624189 193624301 + misc_RNA NOVEL NA 113 113 1 ENSG00000243991.3 RN7SL447P chr3 193740471 193740715 - misc_RNA KNOWN NA 245 245 1 ENSG00000223986.1 RP11-528A4.3 chr3 193765681 193766003 + processed_pseudogene KNOWN OTTHUMG00000156054.1 323 323 1 ENSG00000229155.1 RP11-528A4.2 chr3 193842560 193844024 - lincRNA NOVEL OTTHUMG00000156053.1 1465 984 5 ENSG00000214146.2 RP11-699L21.1 chr3 193957372 194003659 - lincRNA NOVEL OTTHUMG00000155981.1 46288 2335 5 ENSG00000238043.1 RP11-699L21.2 chr3 193980614 194006098 + lincRNA NOVEL OTTHUMG00000155987.1 25485 566 3 ENSG00000224403.1 DPPA2P3 chr3 193993331 193993985 - processed_pseudogene KNOWN OTTHUMG00000155990.1 655 655 1 ENSG00000230102.6 RP11-407B7.1 chr3 194005259 194070970 - processed_transcript NOVEL OTTHUMG00000155989.5 65712 7346 99 ENSG00000276407.3 RP11-407B7.3 chr3 194070103 194080443 + lincRNA NOVEL OTTHUMG00000188112.1 10341 585 7 ENSG00000229964.1 RP11-135A1.3 chr3 194091561 194109174 + lincRNA NOVEL OTTHUMG00000155980.1 17614 406 2 ENSG00000243970.1 PPIEL chr1 39531838 39558707 - unprocessed_pseudogene KNOWN OTTHUMG00000008393.2 26870 813 7 ENSG00000232874.1 RP11-135A1.2 chr3 194130616 194131201 - antisense NOVEL OTTHUMG00000155988.1 586 430 2 ENSG00000114315.3 HES1 chr3 194136145 194138732 + protein_coding KNOWN OTTHUMG00000155984.1 2588 2062 6 ENSG00000242201.3 RN7SL215P chr3 194145674 194145971 + misc_RNA KNOWN NA 298 298 1 ENSG00000225742.4 RP11-513G11.4 chr3 194203016 194250153 - lincRNA NOVEL OTTHUMG00000155985.1 47138 970 6 ENSG00000238097.1 RP11-513G11.3 chr3 194247648 194257772 + lincRNA NOVEL OTTHUMG00000155986.1 10125 1195 4 ENSG00000228271.1 RP11-513G11.2 chr3 194276682 194287368 + lincRNA NOVEL OTTHUMG00000155983.1 10687 1771 3 ENSG00000214145.5 LINC00887 chr3 194296465 194312803 - lincRNA NOVEL OTTHUMG00000155982.1 16339 4153 16 ENSG00000178772.6 CPN2 chr3 194339765 194351328 - protein_coding KNOWN OTTHUMG00000156047.2 11564 3028 4 ENSG00000172061.8 LRRC15 chr3 194355247 194369743 - protein_coding KNOWN OTTHUMG00000156048.2 14497 5940 5 ENSG00000178732.5 GP5 chr3 194394821 194398354 - protein_coding KNOWN OTTHUMG00000150345.1 3534 3534 1 ENSG00000090621.12 PABPC4 chr1 39560816 39576790 - protein_coding KNOWN OTTHUMG00000009097.4 15975 6782 147 ENSG00000133657.13 ATP13A3 chr3 194402672 194498364 - protein_coding KNOWN OTTHUMG00000156034.3 95693 11864 110 ENSG00000271483.1 RP11-384A12.1 chr3 194471923 194472085 + processed_pseudogene KNOWN OTTHUMG00000184288.1 163 163 1 ENSG00000233058.1 LINC00884 chr3 194487454 194518279 + antisense NOVEL OTTHUMG00000156037.1 30826 2922 5 ENSG00000244675.2 AC108676.1 chr3 194496317 194501503 - sense_overlapping NOVEL OTTHUMG00000156035.2 5187 2969 2 ENSG00000252053.1 RNU6-1101P chr3 194533503 194533583 - snRNA KNOWN NA 81 81 1 ENSG00000232873.1 AC046143.6 chr3 194562978 194564001 - processed_pseudogene KNOWN OTTHUMG00000156036.1 1024 484 3 ENSG00000231770.4 TMEM44-AS1 chr3 194584011 194590260 + antisense NOVEL OTTHUMG00000156027.2 6250 1119 11 ENSG00000145014.16 TMEM44 chr3 194587673 194633689 - protein_coding KNOWN OTTHUMG00000156023.3 46017 4561 97 ENSG00000229334.1 AC046143.3 chr3 194632923 194645401 + antisense NOVEL OTTHUMG00000156018.1 12479 972 2 ENSG00000272707.1 RP11-534C12.1 chr3 194637505 194637664 - lincRNA NOVEL OTTHUMG00000186145.1 160 160 1 ENSG00000228060.1 RP11-69E11.8 chr1 39565160 39573203 + antisense NOVEL OTTHUMG00000009098.1 8044 551 4 ENSG00000041802.9 LSG1 chr3 194640788 194672477 - protein_coding KNOWN OTTHUMG00000156021.1 31690 4818 43 ENSG00000185112.5 FAM43A chr3 194686544 194689037 + protein_coding KNOWN OTTHUMG00000156016.1 2494 2494 1 ENSG00000233987.1 AC106706.1 chr3 194705548 194706964 + lincRNA NOVEL OTTHUMG00000156019.1 1417 556 2 ENSG00000237222.3 AC090505.6 chr3 194708421 194782168 + lincRNA NOVEL OTTHUMG00000156020.1 73748 4181 13 ENSG00000234805.1 AC090505.5 chr3 194755589 194757422 + processed_pseudogene KNOWN OTTHUMG00000156026.1 1834 1834 1 ENSG00000230401.1 AC090505.4 chr3 194765238 194768712 - lincRNA NOVEL OTTHUMG00000156022.1 3475 553 3 ENSG00000238031.1 AC090505.1 chr3 194827890 194832592 + lincRNA NOVEL OTTHUMG00000156017.1 4703 464 3 ENSG00000173950.14 XXYLT1 chr3 195068279 195271167 - protein_coding KNOWN OTTHUMG00000155915.2 202889 5409 41 ENSG00000233303.1 XXYLT1-AS1 chr3 195094588 195096057 + antisense NOVEL OTTHUMG00000155917.1 1470 431 4 ENSG00000265333.1 MIR3137 chr3 195134506 195134580 - miRNA KNOWN NA 75 75 1 ENSG00000201457.1 SNORA55 chr1 39567374 39567508 - snoRNA KNOWN NA 135 135 1 ENSG00000244314.3 RN7SL36P chr3 195146728 195147003 - misc_RNA KNOWN NA 276 276 1 ENSG00000230266.1 XXYLT1-AS2 chr3 195147871 195152790 + antisense NOVEL OTTHUMG00000155916.1 4920 784 4 ENSG00000206600.1 RNU6-25P chr3 195214787 195214893 + snRNA KNOWN NA 107 107 1 ENSG00000281397.1 Metazoa_SRP chr3 195245066 195245324 - misc_RNA NOVEL NA 259 259 1 ENSG00000114331.11 ACAP2 chr3 195274736 195443078 - protein_coding KNOWN OTTHUMG00000155885.5 168343 11118 110 ENSG00000229325.1 ACAP2-IT1 chr3 195280723 195282741 - sense_intronic NOVEL OTTHUMG00000155905.1 2019 690 2 ENSG00000227433.1 AC069213.4 chr3 195349664 195350030 + processed_pseudogene KNOWN OTTHUMG00000155906.1 367 367 1 ENSG00000207368.1 Y_RNA chr3 195419436 195419546 - misc_RNA NOVEL NA 111 111 1 ENSG00000184203.6 PPP1R2 chr3 195514425 195543386 - protein_coding KNOWN OTTHUMG00000155887.4 28962 5126 28 ENSG00000252620.1 RNU6ATAC24P chr3 195523087 195523221 - snRNA KNOWN NA 135 135 1 ENSG00000160072.18 ATAD3B chr1 1471769 1497848 + protein_coding KNOWN OTTHUMG00000000577.5 26080 7682 49 ENSG00000163909.7 HEYL chr1 39624153 39639945 - protein_coding KNOWN OTTHUMG00000000458.2 15793 3661 5 ENSG00000223711.1 AC091633.3 chr3 195544048 195550581 + antisense NOVEL OTTHUMG00000155888.2 6534 1041 6 ENSG00000265882.2 RN7SL73P chr3 195553792 195554043 + misc_RNA KNOWN NA 252 252 1 ENSG00000236844.1 AC091633.2 chr3 195554610 195555083 + processed_pseudogene KNOWN OTTHUMG00000155886.1 474 474 1 ENSG00000236425.1 AC090018.1 chr3 195561215 195561580 - processed_pseudogene KNOWN OTTHUMG00000155884.1 366 366 1 ENSG00000189058.7 APOD chr3 195568702 195584205 - protein_coding KNOWN OTTHUMG00000155854.1 15504 2197 27 ENSG00000224769.1 AC069213.1 chr3 195614947 195620233 + unprocessed_pseudogene KNOWN OTTHUMG00000155856.1 5287 1680 2 ENSG00000272792.1 RP11-141C7.4 chr3 195639990 195640460 + lincRNA NOVEL OTTHUMG00000186147.1 471 471 1 ENSG00000271662.1 RP11-141C7.3 chr3 195650146 195651472 - processed_pseudogene KNOWN OTTHUMG00000184347.1 1327 1070 2 ENSG00000229178.1 AC069513.4 chr3 195655565 195657927 - lincRNA NOVEL OTTHUMG00000155836.1 2363 1684 3 ENSG00000242086.7 LINC00969 chr3 195658062 195739964 + lincRNA NOVEL OTTHUMG00000155834.12 81903 17599 562 ENSG00000225903.1 RP1-144F13.3 chr1 39633416 39633903 + antisense NOVEL OTTHUMG00000037279.1 488 304 2 ENSG00000215837.7 SDHAP2 chr3 195658096 195685904 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155835.1 27809 2001 15 ENSG00000276635.1 AC233280.3 chr3 195688008 195688120 + miRNA NOVEL NA 113 113 1 ENSG00000207650.1 MIR570 chr3 195699401 195699497 + miRNA KNOWN NA 97 97 1 ENSG00000176945.15 MUC20 chr3 195720882 195741123 + protein_coding KNOWN OTTHUMG00000155823.1 20242 4249 27 ENSG00000145113.20 MUC4 chr3 195746765 195812277 - protein_coding KNOWN OTTHUMG00000151827.6 65513 21325 424 ENSG00000223783.1 AC124944.5 chr3 195836193 195860404 - lincRNA NOVEL OTTHUMG00000155824.1 24212 943 6 ENSG00000235836.1 AC124944.4 chr3 195843986 195844596 + processed_pseudogene KNOWN OTTHUMG00000155826.1 611 611 1 ENSG00000061938.15 TNK2 chr3 195863364 195911945 - protein_coding KNOWN OTTHUMG00000155737.6 48582 11297 147 ENSG00000276489.1 MIR6829 chr3 195882329 195882395 - miRNA KNOWN NA 67 67 1 ENSG00000224614.1 TNK2-AS1 chr3 195908076 195911257 + antisense NOVEL OTTHUMG00000155738.1 3182 2096 2 ENSG00000116981.3 NT5C1A chr1 39659121 39672038 - protein_coding KNOWN OTTHUMG00000009244.1 12918 1107 6 ENSG00000226155.1 AC124944.3 chr3 195912049 195913986 + antisense NOVEL OTTHUMG00000155825.1 1938 741 4 ENSG00000273009.1 RP11-352G9.1 chr3 195913078 195913683 - lincRNA NOVEL OTTHUMG00000186151.1 606 606 1 ENSG00000239122.1 RNU2-11P chr3 195928589 195928775 - snRNA KNOWN NA 187 187 1 ENSG00000231443.2 AC024937.6 chr3 195937243 195938739 + processed_pseudogene KNOWN OTTHUMG00000155736.1 1497 1242 2 ENSG00000260261.1 RP11-480A16.1 chr3 195949188 195952695 - lincRNA NOVEL OTTHUMG00000175858.1 3508 3508 1 ENSG00000185485.13 SDHAP1 chr3 195959748 195990318 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155716.1 30571 3353 58 ENSG00000278820.1 AC024937.1 chr3 195960500 195960612 - miRNA NOVEL NA 113 113 1 ENSG00000231464.1 AC024937.4 chr3 195996738 195998233 + processed_pseudogene KNOWN OTTHUMG00000155715.1 1496 1242 2 ENSG00000072274.11 TFRC chr3 196027183 196082189 - protein_coding KNOWN OTTHUMG00000155714.1 55007 7887 103 ENSG00000228413.1 AC024937.2 chr3 196044695 196045254 + processed_pseudogene KNOWN OTTHUMG00000155717.1 560 344 2 ENSG00000116983.11 HPCAL4 chr1 39678648 39691689 - protein_coding KNOWN OTTHUMG00000009246.1 13042 4962 12 ENSG00000252174.1 RNU7-18P chr3 196072819 196072880 + snRNA KNOWN NA 62 62 1 ENSG00000224652.1 LINC00885 chr3 196142636 196160890 + lincRNA NOVEL OTTHUMG00000155713.1 18255 1828 3 ENSG00000163958.12 ZDHHC19 chr3 196197449 196211437 - protein_coding KNOWN OTTHUMG00000133642.3 13989 2432 44 ENSG00000222335.1 Y_RNA chr3 196202349 196202453 + misc_RNA NOVEL NA 105 105 1 ENSG00000163959.8 SLC51A chr3 196211487 196243178 + protein_coding KNOWN OTTHUMG00000155684.2 31692 5293 53 ENSG00000161217.10 PCYT1A chr3 196214222 196287957 - protein_coding KNOWN OTTHUMG00000155670.1 73736 7978 94 ENSG00000272741.1 RP11-447L10.1 chr3 196248230 196318222 - protein_coding KNOWN OTTHUMG00000155672.1 69993 708 6 ENSG00000228028.2 AC069257.8 chr3 196250542 196251654 + antisense NOVEL OTTHUMG00000155671.2 1113 429 4 ENSG00000213123.9 TCTEX1D2 chr3 196291219 196318299 - protein_coding KNOWN OTTHUMG00000186382.1 27081 1246 20 ENSG00000237418.1 AC069257.6 chr3 196298061 196298215 - processed_pseudogene KNOWN OTTHUMG00000155673.1 155 155 1 ENSG00000084072.15 PPIE chr1 39692182 39763914 + protein_coding KNOWN OTTHUMG00000009248.3 71733 8071 118 ENSG00000273331.1 TM4SF19-TCTEX1D2 chr3 196316082 196338373 - protein_coding NOVEL OTTHUMG00000186464.1 22292 964 6 ENSG00000235897.1 TM4SF19-AS1 chr3 196318330 196325570 + antisense NOVEL OTTHUMG00000155669.1 7241 2136 6 ENSG00000145107.14 TM4SF19 chr3 196319342 196338503 - protein_coding KNOWN OTTHUMG00000155675.2 19162 1899 17 ENSG00000212146.1 RNU6-910P chr3 196341609 196341715 - snRNA KNOWN NA 107 107 1 ENSG00000163960.10 UBXN7 chr3 196347662 196432474 - protein_coding KNOWN OTTHUMG00000155639.3 84813 11291 41 ENSG00000206644.1 RNU6-1279P chr3 196393710 196393812 - snRNA KNOWN NA 103 103 1 ENSG00000241868.3 RN7SL434P chr3 196397508 196397778 - misc_RNA KNOWN NA 271 271 1 ENSG00000243339.3 RN7SL738P chr3 196399911 196400207 + misc_RNA KNOWN NA 297 297 1 ENSG00000226345.1 AC083822.2 chr3 196423322 196423522 + processed_pseudogene KNOWN OTTHUMG00000155668.1 201 201 1 ENSG00000225822.4 UBXN7-AS1 chr3 196431385 196432530 + antisense NOVEL OTTHUMG00000155674.1 1146 386 2 ENSG00000225333.6 RP1-144F13.4 chr1 39718028 39718595 + processed_pseudogene KNOWN OTTHUMG00000000457.4 568 568 1 ENSG00000225240.1 AC117490.2 chr3 196452996 196453055 - unprocessed_pseudogene KNOWN OTTHUMG00000155622.1 60 60 1 ENSG00000163961.4 RNF168 chr3 196468783 196503768 - protein_coding KNOWN OTTHUMG00000155582.1 34986 5347 11 ENSG00000273013.1 CTD-2002J20.1 chr3 196474801 196475394 + antisense NOVEL OTTHUMG00000186157.1 594 594 1 ENSG00000214097.4 SMCO1 chr3 196506877 196515366 - protein_coding KNOWN OTTHUMG00000155581.1 8490 1868 6 ENSG00000213358.3 AC092933.4 chr3 196527339 196528791 - unprocessed_pseudogene KNOWN OTTHUMG00000155583.1 1453 945 2 ENSG00000225770.1 AC092933.3 chr3 196536532 196536702 + processed_pseudogene KNOWN OTTHUMG00000155584.1 171 171 1 ENSG00000185798.7 WDR53 chr3 196554177 196568674 - protein_coding KNOWN OTTHUMG00000155572.6 14498 1797 14 ENSG00000174013.7 FBXO45 chr3 196568611 196589059 + protein_coding KNOWN OTTHUMG00000155571.2 20449 5976 6 ENSG00000232065.1 LINC01063 chr3 196631498 196632587 - antisense NOVEL OTTHUMG00000155570.1 1090 348 2 ENSG00000174004.5 NRROS chr3 196639686 196662004 + protein_coding KNOWN OTTHUMG00000155569.1 22319 2910 5 ENSG00000252413.1 RNU7-121P chr1 39723566 39723627 - snRNA KNOWN NA 62 62 1 ENSG00000163964.12 PIGX chr3 196639775 196736007 + protein_coding KNOWN OTTHUMG00000155535.2 96233 4446 51 ENSG00000174007.7 CEP19 chr3 196706277 196712293 - protein_coding KNOWN OTTHUMG00000153933.2 6017 2201 5 ENSG00000201441.1 RNU6-646P chr3 196708859 196708964 - snRNA KNOWN NA 106 106 1 ENSG00000180370.9 PAK2 chr3 196739857 196832647 + protein_coding KNOWN OTTHUMG00000155534.2 92791 6270 23 ENSG00000272359.1 U4 chr3 196747192 196747324 - snRNA NOVEL NA 133 133 1 ENSG00000206892.1 RNU6-42P chr3 196784980 196785086 - snRNA KNOWN NA 107 107 1 ENSG00000119231.9 SENP5 chr3 196867856 196934714 + protein_coding KNOWN OTTHUMG00000155527.1 66859 7035 41 ENSG00000230732.4 AC127904.2 chr3 196912646 196914579 + sense_intronic NOVEL OTTHUMG00000155528.4 1934 1413 2 ENSG00000114503.9 NCBP2 chr3 196935402 196942597 - protein_coding KNOWN OTTHUMG00000155520.2 7196 5114 43 ENSG00000225578.1 NCBP2-AS1 chr3 196939877 196942534 + antisense NOVEL OTTHUMG00000155523.1 2658 562 3 ENSG00000116985.9 BMP8B chr1 39757182 39788861 - protein_coding KNOWN OTTHUMG00000009247.1 31680 5143 13 ENSG00000270170.1 NCBP2-AS2 chr3 196942623 196943540 + lincRNA NOVEL OTTHUMG00000184107.1 918 918 1 ENSG00000119227.6 PIGZ chr3 196946343 196969060 - protein_coding KNOWN OTTHUMG00000155522.2 22718 3211 10 ENSG00000233487.6 AC011322.1 chr3 196983890 196987558 - transcribed_processed_pseudogene KNOWN OTTHUMG00000155521.1 3669 1189 3 ENSG00000163975.10 MFI2 chr3 196988621 197029816 - protein_coding KNOWN OTTHUMG00000155518.1 41196 8393 36 ENSG00000228109.1 MFI2-AS1 chr3 196999460 197004744 + antisense NOVEL OTTHUMG00000155519.1 5285 1139 12 ENSG00000075711.19 DLG1 chr3 197042560 197299300 - protein_coding KNOWN OTTHUMG00000047972.10 256741 11001 343 ENSG00000265850.1 MIR4797 chr3 197293878 197293948 - miRNA KNOWN NA 71 71 1 ENSG00000227375.4 DLG1-AS1 chr3 197298252 197303747 + antisense NOVEL OTTHUMG00000155484.1 5496 1694 6 ENSG00000235126.1 AC128709.3 chr3 197445061 197458323 - lincRNA NOVEL OTTHUMG00000155481.1 13263 558 3 ENSG00000229912.1 AC128709.4 chr3 197450327 197456654 - lincRNA NOVEL OTTHUMG00000155483.1 6328 600 3 ENSG00000198754.5 OXCT2 chr1 39769523 39771348 - protein_coding KNOWN OTTHUMG00000009249.1 1826 1826 1 ENSG00000237167.1 AC128709.2 chr3 197458405 197467105 + lincRNA NOVEL OTTHUMG00000155482.1 8701 626 2 ENSG00000272989.1 RP13-616I3.1 chr3 197505262 197506986 - lincRNA NOVEL OTTHUMG00000186169.1 1725 1725 1 ENSG00000161267.10 BDH1 chr3 197509783 197573323 - protein_coding KNOWN OTTHUMG00000155478.9 63541 9114 77 ENSG00000214135.7 AC024560.3 chr3 197578213 197627906 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155479.1 49694 3502 48 ENSG00000213519.2 AC132008.1 chr3 197580344 197580629 - processed_pseudogene KNOWN OTTHUMG00000155480.1 286 286 1 ENSG00000249626.1 RP11-496H1.1 chr3 197634315 197635811 + processed_pseudogene KNOWN OTTHUMG00000160226.1 1497 1497 1 ENSG00000273308.1 RP11-496H1.2 chr3 197645669 197646017 + lincRNA NOVEL OTTHUMG00000186170.1 349 349 1 ENSG00000236833.1 AC024560.2 chr3 197660565 197665757 - lincRNA NOVEL OTTHUMG00000155477.1 5193 1471 2 ENSG00000145016.12 KIAA0226 chr3 197671393 197749727 - protein_coding KNOWN OTTHUMG00000155452.4 78335 8613 99 ENSG00000216042.1 MIR922 chr3 197674496 197674576 - miRNA KNOWN NA 81 81 1 ENSG00000261798.1 RP1-118J21.25 chr1 39788976 39790171 + antisense NOVEL OTTHUMG00000175804.1 1196 1196 1 ENSG00000122068.11 FYTTD1 chr3 197737179 197787596 + protein_coding KNOWN OTTHUMG00000155453.10 50418 8025 61 ENSG00000273375.1 RP11-803P9.1 chr3 197789700 197790369 + lincRNA NOVEL OTTHUMG00000186171.1 670 670 1 ENSG00000186001.11 LRCH3 chr3 197791226 197888436 + protein_coding KNOWN OTTHUMG00000155378.2 97211 12639 167 ENSG00000234136.1 AC055764.1 chr3 197830685 197831296 - antisense NOVEL OTTHUMG00000155409.1 612 473 2 ENSG00000234742.1 AC144530.1 chr3 197850400 197850954 - processed_pseudogene KNOWN OTTHUMG00000155432.1 555 555 1 ENSG00000114473.12 IQCG chr3 197889075 197960142 - protein_coding KNOWN OTTHUMG00000155408.1 71068 7474 72 ENSG00000199306.1 RNU6-858P chr3 197894507 197894613 + snRNA KNOWN NA 107 107 1 ENSG00000182899.13 RPL35A chr3 197949987 197956610 + protein_coding KNOWN OTTHUMG00000155386.1 6624 2977 38 ENSG00000185621.10 LMLN chr3 197960200 198043720 + protein_coding KNOWN OTTHUMG00000155375.1 83521 8692 107 ENSG00000201622.1 RNU6-621P chr3 197994601 197994709 + snRNA KNOWN NA 109 109 1 ENSG00000197785.12 ATAD3A chr1 1512151 1534687 + protein_coding KNOWN OTTHUMG00000000575.6 22537 3069 77 ENSG00000229213.1 RP1-118J21.24 chr1 39795843 39795996 - unprocessed_pseudogene KNOWN OTTHUMG00000057515.2 154 154 1 ENSG00000232832.1 LMLN-AS1 chr3 198038321 198039234 - antisense NOVEL OTTHUMG00000155374.1 914 542 3 ENSG00000226435.9 ANKRD18DP chr3 198053522 198080720 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000150228.3 27199 3449 28 ENSG00000212297.1 RNU6-821P chr3 198071311 198071417 - snRNA KNOWN NA 107 107 1 ENSG00000232783.4 FRG2FP chr3 198110112 198111878 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155373.1 1767 1155 11 ENSG00000213113.3 TUBB8P8 chr3 198119721 198120778 + unprocessed_pseudogene KNOWN OTTHUMG00000155372.1 1058 1058 1 ENSG00000236246.1 AC073135.4 chr3 198121388 198123274 - processed_pseudogene KNOWN OTTHUMG00000155435.1 1887 802 3 ENSG00000236438.5 FAM157A chr3 198152366 198170059 + lincRNA KNOWN OTTHUMG00000155433.3 17694 1528 10 ENSG00000278679.1 RP11-694O4.1 chr3 198180755 198190045 + unprocessed_pseudogene KNOWN OTTHUMG00000187506.1 9291 385 3 ENSG00000222792.1 RNU6-860P chr3 198196746 198196849 + snRNA KNOWN NA 104 104 1 ENSG00000230304.1 CICP6 chr3 198223497 198226310 - processed_pseudogene KNOWN OTTHUMG00000155429.1 2814 2729 2 ENSG00000043514.14 TRIT1 chr1 39841022 39883511 - protein_coding KNOWN OTTHUMG00000009245.3 42490 2663 107 ENSG00000226008.1 AC073135.7 chr3 198228194 198228376 + unprocessed_pseudogene KNOWN OTTHUMG00000155430.1 183 183 1 ENSG00000248302.3 BNIP3P41 chr4 49096 50124 - transcribed_processed_pseudogene KNOWN OTTHUMG00000159940.3 1029 1029 2 ENSG00000272602.4 ZNF595 chr4 53285 88211 + protein_coding KNOWN OTTHUMG00000159865.5 34927 3933 16 ENSG00000207643.1 AC253576.1 chr4 65125 65233 + miRNA NOVEL NA 109 109 1 ENSG00000250238.1 Z95704.3 chr4 105959 107114 - processed_pseudogene KNOWN OTTHUMG00000159898.1 1156 1156 1 ENSG00000250312.5 ZNF718 chr4 124480 163989 + protein_coding KNOWN OTTHUMG00000159873.8 39510 4118 8 ENSG00000211553.1 AC253576.2 chr4 136461 136568 + miRNA NOVEL NA 108 108 1 ENSG00000275426.1 CH17-262A2.1 chr4 149738 150317 + sense_intronic NOVEL OTTHUMG00000188626.1 580 580 1 ENSG00000250892.1 RP11-1365D11.1 chr4 201409 205009 - unprocessed_pseudogene KNOWN OTTHUMG00000159897.1 3601 950 2 ENSG00000198155.5 ZNF876P chr4 212610 255985 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000159874.2 43376 2804 5 ENSG00000202222.1 Y_RNA chr1 39881566 39881678 - misc_RNA NOVEL NA 113 113 1 ENSG00000252616.1 AC079140.1 chr4 224215 224323 + miRNA NOVEL NA 109 109 1 ENSG00000251188.1 RP11-478C6.6 chr4 268982 269531 - processed_pseudogene KNOWN OTTHUMG00000159939.1 550 550 1 ENSG00000251689.1 RP11-478C6.5 chr4 269866 270175 - processed_pseudogene KNOWN OTTHUMG00000159932.1 310 310 1 ENSG00000186777.10 ZNF732 chr4 270675 305321 - protein_coding KNOWN OTTHUMG00000159883.2 34647 2193 7 ENSG00000251535.1 RP11-478C6.1 chr4 336258 336786 - processed_pseudogene KNOWN OTTHUMG00000159938.1 529 529 1 ENSG00000131127.12 ZNF141 chr4 337814 384864 + protein_coding KNOWN OTTHUMG00000159852.4 47051 5744 21 ENSG00000248564.1 RP11-478C6.2 chr4 338097 338583 - processed_pseudogene KNOWN OTTHUMG00000159934.1 487 487 1 ENSG00000250321.1 RP11-478C6.4 chr4 342821 342962 - processed_pseudogene KNOWN OTTHUMG00000159937.1 142 142 1 ENSG00000207642.1 MIR571 chr4 350157 350252 + miRNA KNOWN NA 96 96 1 ENSG00000281016.1 RP11-2H3.7 chr4 386174 454070 + antisense NOVEL OTTHUMG00000189757.1 67897 753 2 ENSG00000116990.10 MYCL chr1 39895426 39902256 - protein_coding KNOWN OTTHUMG00000009243.4 6831 5063 9 ENSG00000249025.1 ZNF519P4 chr4 393534 393658 + processed_pseudogene KNOWN OTTHUMG00000159864.1 125 125 1 ENSG00000211482.1 AC092574.1 chr4 409809 409915 + miRNA NOVEL NA 107 107 1 ENSG00000272885.1 RP11-2H3.6 chr4 416118 416537 - lincRNA NOVEL OTTHUMG00000186191.1 420 420 1 ENSG00000251595.6 ABCA11P chr4 425435 474129 - transcribed_processed_pseudogene KNOWN OTTHUMG00000159884.1 48695 2790 11 ENSG00000182903.14 ZNF721 chr4 425815 499156 - protein_coding KNOWN OTTHUMG00000112450.5 73342 6390 23 ENSG00000252150.1 AC092574.2 chr4 467528 467636 - miRNA NOVEL NA 109 109 1 ENSG00000174227.14 PIGG chr4 499210 540196 + protein_coding KNOWN OTTHUMG00000112457.7 40987 10895 133 ENSG00000273238.1 RP11-1263C18.1 chr4 573880 574412 - lincRNA NOVEL OTTHUMG00000186192.1 533 533 1 ENSG00000133256.11 PDE6B chr4 625584 670782 + protein_coding KNOWN OTTHUMG00000159909.3 45199 5086 101 ENSG00000242686.4 RP11-1191J2.2 chr4 652850 656213 - antisense NOVEL OTTHUMG00000159908.4 3364 2353 9 ENSG00000236546.1 RP1-118J21.5 chr1 39897745 39899098 + antisense NOVEL OTTHUMG00000009292.1 1354 785 2 ENSG00000272927.1 RP11-1191J2.5 chr4 661209 661945 - antisense NOVEL OTTHUMG00000186193.1 737 737 1 ENSG00000169020.8 ATP5I chr4 672436 674338 - protein_coding KNOWN OTTHUMG00000086929.2 1903 940 15 ENSG00000215375.5 MYL5 chr4 673580 682033 + protein_coding KNOWN OTTHUMG00000159971.2 8454 4305 52 ENSG00000169026.11 MFSD7 chr4 681829 689441 - protein_coding KNOWN OTTHUMG00000119001.8 7613 2644 67 ENSG00000185619.16 PCGF3 chr4 705748 770640 + protein_coding KNOWN OTTHUMG00000119000.2 64893 7425 95 ENSG00000248416.1 RP11-1191J2.4 chr4 722275 724034 - antisense NOVEL OTTHUMG00000159970.1 1760 569 2 ENSG00000272588.1 RP11-440L14.4 chr4 757022 757740 - antisense NOVEL OTTHUMG00000186219.1 719 719 1 ENSG00000249592.4 RP11-440L14.1 chr4 762387 781849 - antisense NOVEL OTTHUMG00000160004.1 19463 1575 8 ENSG00000233799.1 AC139887.4 chr4 764487 765074 - antisense NOVEL OTTHUMG00000150498.1 588 286 2 ENSG00000168993.13 CPLX1 chr4 784957 826198 - protein_coding KNOWN OTTHUMG00000160005.1 41242 2418 14 ENSG00000207356.1 Y_RNA chr1 39944890 39944998 - misc_RNA NOVEL NA 109 109 1 ENSG00000260262.1 RP11-440L14.3 chr4 836512 837224 - lincRNA NOVEL OTTHUMG00000176263.1 713 713 1 ENSG00000178950.15 GAK chr4 849276 932373 - protein_coding KNOWN OTTHUMG00000088301.4 83098 15155 157 ENSG00000127419.15 TMEM175 chr4 932387 958656 + protein_coding KNOWN OTTHUMG00000118996.4 26270 3623 166 ENSG00000145214.12 DGKQ chr4 958887 986895 - protein_coding KNOWN OTTHUMG00000088629.3 28009 4970 64 ENSG00000145217.12 SLC26A1 chr4 979073 993440 - protein_coding KNOWN OTTHUMG00000160003.1 14368 4293 16 ENSG00000127415.11 IDUA chr4 986997 1004506 + protein_coding KNOWN OTTHUMG00000088901.3 17510 4000 74 ENSG00000127418.13 FGFRL1 chr4 1009936 1026897 + protein_coding KNOWN OTTHUMG00000118998.2 16962 4145 37 ENSG00000250259.1 RP11-460I19.2 chr4 1027678 1028972 + lincRNA NOVEL OTTHUMG00000160084.1 1295 272 2 ENSG00000178222.11 RNF212 chr4 1056250 1113562 - protein_coding KNOWN OTTHUMG00000118997.4 57313 5003 91 ENSG00000251639.2 RP11-20I20.1 chr4 1100016 1101558 - processed_pseudogene KNOWN OTTHUMG00000160085.3 1543 1204 2 ENSG00000168389.16 MFSD2A chr1 39955112 39969968 + protein_coding KNOWN OTTHUMG00000009293.2 14857 4007 87 ENSG00000251652.1 RP11-20I20.2 chr4 1113639 1132977 + antisense NOVEL OTTHUMG00000160168.1 19339 515 5 ENSG00000215367.9 TMED11P chr4 1115197 1153726 - unitary_pseudogene KNOWN OTTHUMG00000154635.3 38530 756 11 ENSG00000212458.1 SNORA48 chr4 1118884 1119013 + snoRNA NOVEL NA 130 130 1 ENSG00000227189.2 AC092535.3 chr4 1151372 1153701 + antisense NOVEL OTTHUMG00000118999.1 2330 2165 2 ENSG00000159674.10 SPON2 chr4 1166932 1208962 - protein_coding KNOWN OTTHUMG00000089002.2 42031 6013 77 ENSG00000273179.1 RP11-20I20.4 chr4 1167778 1168174 + antisense NOVEL OTTHUMG00000186224.1 397 397 1 ENSG00000280927.1 CTBP1-AS chr4 1210120 1218591 + antisense KNOWN OTTHUMG00000189534.1 8472 3886 6 ENSG00000159692.14 CTBP1 chr4 1211448 1249953 - protein_coding KNOWN OTTHUMG00000089259.8 38506 8361 83 ENSG00000196810.4 CTBP1-AS2 chr4 1249300 1288291 + antisense KNOWN OTTHUMG00000160166.2 38992 7820 11 ENSG00000090316.14 MAEA chr4 1289851 1340147 + protein_coding KNOWN OTTHUMG00000160169.6 50297 9857 113 ENSG00000228477.1 RP3-342P20.2 chr1 39962680 39963404 + processed_pseudogene KNOWN OTTHUMG00000009294.1 725 725 1 ENSG00000163945.14 UVSSA chr4 1347266 1388049 + protein_coding KNOWN OTTHUMG00000160167.1 40784 7830 65 ENSG00000254094.1 AC078852.1 chr4 1356581 1358075 + sense_intronic NOVEL OTTHUMG00000163525.1 1495 527 2 ENSG00000253399.1 AC078852.2 chr4 1358479 1359461 + sense_intronic NOVEL OTTHUMG00000163526.1 983 441 2 ENSG00000179979.8 CRIPAK chr4 1391552 1395989 + protein_coding KNOWN OTTHUMG00000121131.3 4438 4438 1 ENSG00000235608.1 NKX1-1 chr4 1402932 1406331 - protein_coding KNOWN OTTHUMG00000160165.2 3400 1236 2 ENSG00000272783.1 RP13-1016M1.2 chr4 1550284 1550572 + lincRNA NOVEL OTTHUMG00000186229.1 289 289 1 ENSG00000244459.2 RP11-1398P2.1 chr4 1574062 1580253 - lincRNA NOVEL OTTHUMG00000158335.3 6192 579 2 ENSG00000174137.11 FAM53A chr4 1617915 1684302 - protein_coding KNOWN OTTHUMG00000159855.5 66388 4239 28 ENSG00000207009.1 Y_RNA chr4 1683420 1683529 - misc_RNA NOVEL NA 110 110 1 ENSG00000163950.11 SLBP chr4 1692800 1712555 - protein_coding KNOWN OTTHUMG00000089349.5 19756 2026 42 ENSG00000131236.15 CAP1 chr1 40040233 40072649 + protein_coding KNOWN OTTHUMG00000004493.1 32417 3814 163 ENSG00000270195.1 RP11-572O17.1 chr4 1712821 1713622 + lincRNA NOVEL OTTHUMG00000185171.1 802 802 1 ENSG00000168936.9 TMEM129 chr4 1715952 1721358 - protein_coding KNOWN OTTHUMG00000121150.3 5407 3442 21 ENSG00000013810.17 TACC3 chr4 1721490 1745176 + protein_coding KNOWN OTTHUMG00000089535.19 23687 6528 93 ENSG00000068078.16 FGFR3 chr4 1793307 1808872 + protein_coding KNOWN OTTHUMG00000121148.4 15566 4834 131 ENSG00000168924.13 LETM1 chr4 1811479 1856247 - protein_coding KNOWN OTTHUMG00000121149.4 44769 8184 35 ENSG00000240455.2 RN7SL671P chr4 1869153 1869214 - miRNA KNOWN NA 62 62 1 ENSG00000109685.16 WHSC1 chr4 1871424 1982207 + protein_coding KNOWN OTTHUMG00000121147.12 110784 19776 267 ENSG00000249784.1 SCARNA22 chr4 1974636 1974760 + scaRNA KNOWN NA 125 125 1 ENSG00000185049.11 NELFA chr4 1982714 2041903 - protein_coding KNOWN OTTHUMG00000089967.22 59190 5935 114 ENSG00000216105.1 MIR943 chr4 1986384 1986477 - miRNA KNOWN NA 94 94 1 ENSG00000131238.15 PPT1 chr1 40072705 40097703 - protein_coding KNOWN OTTHUMG00000004495.5 24999 3306 70 ENSG00000243449.5 C4orf48 chr4 2041993 2043970 + protein_coding KNOWN OTTHUMG00000154503.2 1978 540 8 ENSG00000185818.7 NAT8L chr4 2059512 2069089 + protein_coding KNOWN OTTHUMG00000121151.3 9578 5871 6 ENSG00000130997.15 POLN chr4 2071918 2242121 - protein_coding KNOWN OTTHUMG00000090081.5 170204 7721 127 ENSG00000249006.1 RP11-317B7.2 chr4 2088718 2090617 - processed_pseudogene KNOWN OTTHUMG00000159800.1 1900 1900 1 ENSG00000250623.1 RP11-317B7.3 chr4 2139673 2141058 + antisense NOVEL OTTHUMG00000159799.1 1386 581 2 ENSG00000214367.6 HAUS3 chr4 2227464 2242164 - protein_coding KNOWN OTTHUMG00000159805.14 14701 7067 22 ENSG00000249047.2 COX6B1P5 chr4 2234251 2234499 + processed_pseudogene KNOWN OTTHUMG00000159816.2 249 249 1 ENSG00000123933.13 MXD4 chr4 2247432 2262294 - protein_coding KNOWN OTTHUMG00000090243.5 14863 7058 24 ENSG00000265080.1 MIR4800 chr4 2250077 2250156 - miRNA KNOWN NA 80 80 1 ENSG00000159733.12 ZFYVE28 chr4 2269582 2418663 - protein_coding KNOWN OTTHUMG00000160292.4 149082 9624 75 ENSG00000205090.7 TMEM240 chr1 1535174 1540453 - protein_coding KNOWN OTTHUMG00000042193.3 5280 1380 11 ENSG00000226745.2 RP11-115D7.3 chr1 40132764 40133448 + processed_pseudogene KNOWN OTTHUMG00000004494.2 685 685 1 ENSG00000251148.1 RP11-478C1.7 chr4 2295584 2319089 + antisense NOVEL OTTHUMG00000160291.1 23506 563 3 ENSG00000239247.3 RN7SL589P chr4 2316197 2316506 - misc_RNA KNOWN NA 310 310 1 ENSG00000249077.1 RP11-478C1.8 chr4 2324467 2325082 + processed_pseudogene KNOWN OTTHUMG00000160290.1 616 616 1 ENSG00000249428.4 CFAP99 chr4 2418974 2462963 + protein_coding PUTATIVE OTTHUMG00000160515.3 43990 2319 24 ENSG00000206113.6 RP11-503N18.1 chr4 2418974 2450360 + lincRNA NOVEL OTTHUMG00000160517.3 31387 3832 17 ENSG00000063978.14 RNF4 chr4 2462220 2625320 + protein_coding KNOWN OTTHUMG00000160516.12 163101 7270 118 ENSG00000248399.1 RP11-503N18.4 chr4 2463797 2464124 + sense_intronic NOVEL OTTHUMG00000160511.2 328 220 2 ENSG00000251229.1 RP11-503N18.5 chr4 2505081 2506279 - processed_pseudogene KNOWN OTTHUMG00000160514.1 1199 900 2 ENSG00000248155.1 WI2-89927D4.1 chr4 2607870 2608146 - unprocessed_pseudogene KNOWN OTTHUMG00000160513.1 277 277 1 ENSG00000206738.1 Y_RNA chr4 2615124 2615224 - misc_RNA NOVEL NA 101 101 1 ENSG00000117000.8 RLF chr1 40161373 40240921 + protein_coding KNOWN OTTHUMG00000005763.1 79549 6246 8 ENSG00000125386.13 FAM193A chr4 2625261 2732565 + protein_coding KNOWN OTTHUMG00000160512.2 107305 6174 157 ENSG00000168884.13 TNIP2 chr4 2741648 2756376 - protein_coding KNOWN OTTHUMG00000090267.6 14729 2686 29 ENSG00000087266.14 SH3BP2 chr4 2793023 2841098 + protein_coding KNOWN OTTHUMG00000160801.13 48076 13968 204 ENSG00000087274.15 ADD1 chr4 2843857 2930076 + protein_coding KNOWN OTTHUMG00000122080.20 86220 13106 217 ENSG00000109736.13 MFSD10 chr4 2930561 2934859 - protein_coding KNOWN OTTHUMG00000122081.7 4299 3159 101 ENSG00000249673.5 NOP14-AS1 chr4 2934899 2961738 + antisense NOVEL OTTHUMG00000160136.3 26840 7195 25 ENSG00000087269.14 NOP14 chr4 2937933 2963385 - protein_coding KNOWN OTTHUMG00000159911.4 25453 3538 75 ENSG00000125388.18 GRK4 chr4 2963608 3040747 + protein_coding KNOWN OTTHUMG00000159914.4 77140 4686 80 ENSG00000278136.1 AL390065.1 chr4 2981427 2981512 - miRNA NOVEL NA 86 86 1 ENSG00000199335.1 RNU6-204P chr4 3044101 3044207 + snRNA KNOWN NA 107 107 1 ENSG00000207508.1 RNU6-1237P chr1 40177843 40177949 + snRNA KNOWN NA 107 107 1 ENSG00000251075.1 HTT-AS chr4 3063471 3074514 - antisense NOVEL OTTHUMG00000159915.4 11044 515 3 ENSG00000278778.1 HTT-AS1_1 chr4 3063472 3063701 + misc_RNA NOVEL NA 230 230 1 ENSG00000274693.1 HTT-AS1_2 chr4 3069977 3070151 + misc_RNA NOVEL NA 175 175 1 ENSG00000197386.9 HTT chr4 3074681 3243959 + protein_coding KNOWN OTTHUMG00000159916.5 169279 18128 147 ENSG00000188981.9 MSANTD1 chr4 3244369 3271738 + protein_coding KNOWN OTTHUMG00000159977.4 27370 7553 19 ENSG00000159788.17 RGS12 chr4 3293028 3439913 + protein_coding KNOWN OTTHUMG00000090277.13 146886 13536 185 ENSG00000248840.2 RP11-357G3.2 chr4 3312512 3313058 + transcribed_processed_pseudogene KNOWN OTTHUMG00000159840.2 547 547 2 ENSG00000248843.1 RP11-357G3.1 chr4 3323977 3324762 - processed_pseudogene KNOWN OTTHUMG00000157427.1 786 786 1 ENSG00000109758.7 HGFAC chr4 3441887 3449495 + protein_coding KNOWN OTTHUMG00000090281.6 7609 2847 42 ENSG00000175920.14 DOK7 chr4 3463311 3501473 + protein_coding KNOWN OTTHUMG00000122087.6 38163 4031 33 ENSG00000188800.5 TMCO2 chr1 40245947 40251691 + protein_coding KNOWN OTTHUMG00000005764.1 5745 889 5 ENSG00000261643.1 RP11-529E10.6 chr4 3503597 3504457 - sense_overlapping NOVEL OTTHUMG00000176052.1 861 861 1 ENSG00000163956.9 LRPAP1 chr4 3506376 3532559 - protein_coding KNOWN OTTHUMG00000090299.4 26184 8724 27 ENSG00000280230.1 FKSG51 chr4 3538044 3538418 + protein_coding KNOWN NA 375 375 1 ENSG00000270090.4 RP11-529E10.7 chr4 3544555 3548796 + lincRNA NOVEL OTTHUMG00000184079.1 4242 933 8 ENSG00000216560.4 LINC00955 chr4 3576869 3590711 + processed_transcript NOVEL OTTHUMG00000159817.6 13843 2087 7 ENSG00000250681.1 RP3-368B9.2 chr4 3633029 3633975 + lincRNA NOVEL OTTHUMG00000159993.1 947 466 2 ENSG00000250632.1 RP3-513G18.2 chr4 3673593 3677855 - lincRNA NOVEL OTTHUMG00000159968.1 4263 1033 3 ENSG00000250986.1 AC141928.1 chr4 3758748 3763390 - lincRNA NOVEL OTTHUMG00000159831.5 4643 4525 2 ENSG00000184160.7 ADRA2C chr4 3766348 3768526 + protein_coding KNOWN OTTHUMG00000159830.1 2179 2179 3 ENSG00000251166.1 OR7E163P chr4 3889356 3890249 - unprocessed_pseudogene KNOWN OTTHUMG00000160266.1 894 894 1 ENSG00000259943.1 RP1-39G22.7 chr1 40256427 40257967 - antisense NOVEL OTTHUMG00000175805.2 1541 1541 1 ENSG00000234386.4 OR7E162P chr4 3901566 3902594 - unprocessed_pseudogene KNOWN OTTHUMG00000160265.2 1029 1029 1 ENSG00000249522.1 RP11-718M20.5 chr4 3910283 3910604 + processed_pseudogene KNOWN OTTHUMG00000159994.1 322 322 1 ENSG00000253917.4 AC226119.5 chr4 3915183 3955419 - processed_transcript NOVEL OTTHUMG00000160213.2 40237 682 6 ENSG00000271977.1 AC226119.4 chr4 3915187 3924274 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000185330.1 9088 530 4 ENSG00000251271.3 ALG1L7P chr4 3935447 3942519 + unprocessed_pseudogene KNOWN OTTHUMG00000159841.2 7073 768 8 ENSG00000251669.4 FAM86EP chr4 3941760 3955419 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000159867.7 13660 3476 42 ENSG00000250476.1 ENPP7P9 chr4 3967034 3967660 - processed_pseudogene KNOWN OTTHUMG00000160181.1 627 627 1 ENSG00000243894.1 RP11-489M13.1 chr4 4076711 4077491 - processed_pseudogene KNOWN OTTHUMG00000157429.1 781 781 1 ENSG00000221301.1 AC116562.1 chr4 4084334 4084481 + miRNA NOVEL NA 148 148 1 ENSG00000250940.1 RP11-489M13.3 chr4 4086638 4086814 + processed_pseudogene KNOWN OTTHUMG00000159972.1 177 177 1 ENSG00000084073.7 ZMPSTE24 chr1 40258107 40294184 + protein_coding KNOWN OTTHUMG00000005762.2 36078 3572 20 ENSG00000248669.1 RP11-489M13.2 chr4 4117925 4118284 - processed_pseudogene KNOWN OTTHUMG00000159871.2 360 360 1 ENSG00000198787.5 OR4D12P chr4 4126659 4127569 - unprocessed_pseudogene KNOWN OTTHUMG00000185806.1 911 911 1 ENSG00000250381.1 UNC93B4 chr4 4143458 4150421 - unprocessed_pseudogene KNOWN OTTHUMG00000159866.2 6964 747 4 ENSG00000250710.3 OR7E99P chr4 4156522 4157443 - unprocessed_pseudogene KNOWN OTTHUMG00000159868.2 922 922 1 ENSG00000249844.1 OR7E43P chr4 4174319 4175238 - unprocessed_pseudogene KNOWN OTTHUMG00000159869.2 920 920 1 ENSG00000163982.5 OTOP1 chr4 4188803 4226889 - protein_coding KNOWN OTTHUMG00000090301.2 38087 1864 6 ENSG00000132406.10 TMEM128 chr4 4235542 4248212 - protein_coding KNOWN OTTHUMG00000125475.2 12671 1737 10 ENSG00000145220.12 LYAR chr4 4267701 4290169 - protein_coding KNOWN OTTHUMG00000125477.19 22469 2319 26 ENSG00000168826.14 ZBTB49 chr4 4290251 4321786 + protein_coding KNOWN OTTHUMG00000090325.6 31536 2889 29 ENSG00000248516.1 RP11-265O12.1 chr4 4321962 4334182 + lincRNA NOVEL OTTHUMG00000160206.1 12221 1416 3 ENSG00000231296.1 RP1-39G22.4 chr1 40262672 40262984 - processed_pseudogene KNOWN OTTHUMG00000005765.1 313 313 1 ENSG00000168824.13 D4S234E chr4 4348140 4419058 + protein_coding KNOWN OTTHUMG00000160002.3 70919 4355 60 ENSG00000168818.8 STX18 chr4 4415742 4542346 - protein_coding KNOWN OTTHUMG00000090331.3 126605 5332 63 ENSG00000248221.1 STX18-IT1 chr4 4476121 4481700 - sense_intronic NOVEL OTTHUMG00000159966.1 5580 542 4 ENSG00000237170.3 RPS7P15 chr4 4507078 4507777 + processed_pseudogene KNOWN OTTHUMG00000159924.1 700 584 2 ENSG00000247708.6 STX18-AS1 chr4 4542131 4710938 + antisense NOVEL OTTHUMG00000159923.2 168808 6107 21 ENSG00000280310.1 RP11-326I19.2 chr4 4820405 4821452 + TEC KNOWN OTTHUMG00000176290.1 1048 1048 1 ENSG00000273396.1 LINC01396 chr4 4844437 4850827 + lincRNA NOVEL OTTHUMG00000186235.1 6391 527 4 ENSG00000163132.6 MSX1 chr4 4859666 4863936 + protein_coding KNOWN OTTHUMG00000090335.4 4271 2120 4 ENSG00000251587.1 LDHAP1 chr4 4894182 4895173 - processed_pseudogene KNOWN OTTHUMG00000159967.2 992 992 1 ENSG00000200761.1 RN7SKP113 chr4 4920770 4921064 - misc_RNA KNOWN NA 295 295 1 ENSG00000049089.12 COL9A2 chr1 40300487 40317816 - protein_coding KNOWN OTTHUMG00000005761.3 17330 4151 141 ENSG00000170891.9 CYTL1 chr4 5014586 5019472 - protein_coding KNOWN OTTHUMG00000125479.3 4887 1003 9 ENSG00000152953.11 STK32B chr4 5051442 5500998 + protein_coding KNOWN OTTHUMG00000090423.8 449557 5324 69 ENSG00000252266.1 Y_RNA chr4 5426885 5426984 - misc_RNA NOVEL NA 100 100 1 ENSG00000201496.1 RN7SKP275 chr4 5458581 5458881 - misc_RNA KNOWN NA 301 301 1 ENSG00000082929.7 LINC01587 chr4 5524569 5527801 + processed_transcript KNOWN OTTHUMG00000125492.3 3233 1164 12 ENSG00000173040.11 EVC2 chr4 5542772 5709548 - protein_coding KNOWN OTTHUMG00000125493.7 166777 5509 90 ENSG00000072840.11 EVC chr4 5711197 5814305 + protein_coding KNOWN OTTHUMG00000090427.3 103109 7148 41 ENSG00000072832.13 CRMP1 chr4 5748084 5893058 - protein_coding KNOWN OTTHUMG00000125489.2 144975 5823 71 ENSG00000181215.11 C4orf50 chr4 5897591 5989818 - protein_coding KNOWN OTTHUMG00000149971.3 92228 5372 15 ENSG00000263631.1 MIR378D1 chr4 5923275 5923328 - miRNA KNOWN NA 54 54 1 ENSG00000227311.3 RP1-228H13.1 chr1 40333078 40333557 - processed_pseudogene KNOWN OTTHUMG00000007299.2 480 480 1 ENSG00000152969.15 JAKMIP1 chr4 6026199 6200591 - protein_coding KNOWN OTTHUMG00000125491.6 174393 3673 100 ENSG00000249896.1 RP11-586D19.1 chr4 6200733 6238317 + lincRNA NOVEL OTTHUMG00000160216.1 37585 2547 5 ENSG00000251408.1 RP11-586D19.2 chr4 6202328 6206649 + lincRNA NOVEL OTTHUMG00000160217.1 4322 4121 2 ENSG00000269908.1 RP11-1406H17.1 chr4 6239441 6239937 + lincRNA NOVEL OTTHUMG00000184133.1 497 497 1 ENSG00000109501.12 WFS1 chr4 6269849 6303265 + protein_coding KNOWN OTTHUMG00000090431.3 33417 4513 31 ENSG00000074211.12 PPP2R2C chr4 6320578 6563600 - protein_coding KNOWN OTTHUMG00000090445.6 243023 9198 67 ENSG00000013288.7 MAN2B2 chr4 6575175 6623362 + protein_coding KNOWN OTTHUMG00000160073.3 48188 8898 61 ENSG00000179010.13 MRFAP1 chr4 6640091 6642745 + protein_coding KNOWN OTTHUMG00000125504.3 2655 2655 12 ENSG00000251580.1 RP11-539L10.3 chr4 6670725 6673830 - lincRNA NOVEL OTTHUMG00000162381.1 3106 422 4 ENSG00000170846.14 AC093323.3 chr4 6673451 6676047 + lincRNA NOVEL OTTHUMG00000125505.4 2597 2311 4 ENSG00000084070.10 SMAP2 chr1 40344850 40423326 + protein_coding KNOWN OTTHUMG00000007301.5 78477 3631 49 ENSG00000246526.2 RP11-539L10.2 chr4 6687448 6690519 - lincRNA NOVEL OTTHUMG00000160124.2 3072 1821 3 ENSG00000279859.1 AC093323.1 chr4 6692055 6692462 - protein_coding KNOWN NA 408 408 1 ENSG00000163993.6 S100P chr4 6693069 6697170 + protein_coding KNOWN OTTHUMG00000090491.4 4102 1280 4 ENSG00000178988.10 MRFAP1L1 chr4 6707701 6709880 - protein_coding KNOWN OTTHUMG00000125507.3 2180 2180 3 ENSG00000186222.4 BLOC1S4 chr4 6716055 6717671 + protein_coding KNOWN OTTHUMG00000125510.1 1617 1617 1 ENSG00000170871.10 KIAA0232 chr4 6781375 6884170 + protein_coding KNOWN OTTHUMG00000160072.2 102796 8499 27 ENSG00000132405.17 TBC1D14 chr4 6909242 7033118 + protein_coding KNOWN OTTHUMG00000090493.4 123877 6241 80 ENSG00000187904.3 AC097382.5 chr4 6995341 6998958 + sense_overlapping NOVEL OTTHUMG00000152568.1 3618 591 2 ENSG00000202392.1 RN7SKP292 chr4 6997012 6997328 + misc_RNA KNOWN NA 317 317 1 ENSG00000265550.1 AC097382.1 chr4 6997526 6997626 + miRNA NOVEL NA 101 101 1 ENSG00000160075.11 SSU72 chr1 1541673 1574869 - protein_coding KNOWN OTTHUMG00000000576.5 33197 6925 13 ENSG00000213172.3 RP1-228H13.2 chr1 40364766 40365183 + processed_pseudogene KNOWN OTTHUMG00000007300.2 418 418 1 ENSG00000245748.1 RP11-367J11.2 chr4 7030554 7046231 - antisense NOVEL OTTHUMG00000159982.1 15678 4300 4 ENSG00000173013.5 CCDC96 chr4 7040849 7042939 - protein_coding KNOWN OTTHUMG00000125511.1 2091 2091 1 ENSG00000173011.11 TADA2B chr4 7041899 7057952 + protein_coding KNOWN OTTHUMG00000159983.2 16054 5776 9 ENSG00000109519.11 GRPEL1 chr4 7058906 7068197 - protein_coding KNOWN OTTHUMG00000090495.2 9292 4177 14 ENSG00000245468.3 RP11-367J11.3 chr4 7094571 7103385 - lincRNA NOVEL OTTHUMG00000159980.1 8815 3763 6 ENSG00000200867.1 RN7SKP36 chr4 7112088 7112399 - misc_RNA KNOWN NA 312 312 1 ENSG00000184985.15 SORCS2 chr4 7192538 7742836 + protein_coding KNOWN OTTHUMG00000159981.4 550299 6317 63 ENSG00000264658.1 MIR4798 chr4 7310450 7310524 + miRNA KNOWN NA 75 75 1 ENSG00000275916.1 AC080003.1 chr4 7324128 7324186 - miRNA NOVEL NA 59 59 1 ENSG00000178597.5 PSAPL1 chr4 7432258 7434945 - protein_coding KNOWN OTTHUMG00000160006.1 2688 2688 1 ENSG00000187801.13 ZFP69B chr1 40450102 40463718 + protein_coding KNOWN OTTHUMG00000007302.2 13617 2386 21 ENSG00000266690.1 MIR4274 chr4 7460028 7460118 + miRNA KNOWN NA 91 91 1 ENSG00000272620.1 AFAP1-AS1 chr4 7754090 7778928 + antisense KNOWN OTTHUMG00000186238.1 24839 6795 2 ENSG00000196526.9 AFAP1 chr4 7758714 7939926 - protein_coding KNOWN OTTHUMG00000125515.5 181213 10036 92 ENSG00000228919.5 AC097381.1 chr4 7939001 7940296 + lincRNA NOVEL OTTHUMG00000043201.5 1296 1296 2 ENSG00000163995.17 ABLIM2 chr4 7965310 8158832 - protein_coding KNOWN OTTHUMG00000057427.24 193523 6049 214 ENSG00000207807.1 MIR95 chr4 8005301 8005381 - miRNA KNOWN NA 81 81 1 ENSG00000273267.1 RP11-338K13.1 chr4 8022665 8023126 + antisense NOVEL OTTHUMG00000186243.1 462 462 1 ENSG00000251460.1 RP11-1258F18.1 chr4 8066528 8067724 + antisense NOVEL OTTHUMG00000160933.1 1197 859 2 ENSG00000250471.2 GMPSP1 chr4 8174421 8174999 + processed_pseudogene KNOWN OTTHUMG00000160021.2 579 579 1 ENSG00000125089.15 SH3TC1 chr4 8182072 8241803 + protein_coding KNOWN OTTHUMG00000160934.5 59732 10593 150 ENSG00000260920.2 RP1-228H13.5 chr1 40464319 40466767 + sense_overlapping NOVEL OTTHUMG00000175830.2 2449 2449 1 ENSG00000276852.1 AC104650.1 chr4 8200662 8200719 + miRNA NOVEL NA 58 58 1 ENSG00000281359.1 AC104650.2 chr4 8215292 8216501 - protein_coding NOVEL NA 1210 84 3 ENSG00000170801.8 HTRA3 chr4 8269765 8307111 + protein_coding KNOWN OTTHUMG00000090561.5 37347 3321 16 ENSG00000249145.1 RP11-774O3.2 chr4 8320176 8323863 + lincRNA NOVEL OTTHUMG00000160052.2 3688 492 2 ENSG00000248986.1 RP11-774O3.1 chr4 8320279 8323965 + lincRNA NOVEL OTTHUMG00000160051.5 3687 685 4 ENSG00000251615.3 RP11-774O3.3 chr4 8355090 8358338 - lincRNA NOVEL OTTHUMG00000160053.5 3249 3249 1 ENSG00000087008.14 ACOX3 chr4 8366282 8440723 - protein_coding KNOWN OTTHUMG00000090509.20 74442 3846 84 ENSG00000202054.1 RNA5SP152 chr4 8393015 8393124 + rRNA KNOWN NA 110 110 1 ENSG00000155275.17 TRMT44 chr4 8436140 8493531 + protein_coding KNOWN OTTHUMG00000160935.3 57392 7724 41 ENSG00000251186.1 RP11-689P11.3 chr4 8453410 8454942 - antisense NOVEL OTTHUMG00000128484.20 1533 664 2 ENSG00000279667.1 RP11-656D10.7 chr1 40473055 40474059 + TEC KNOWN OTTHUMG00000175831.1 1005 1005 1 ENSG00000205959.3 RP11-689P11.2 chr4 8482270 8512610 + lincRNA NOVEL OTTHUMG00000160092.3 30341 3374 6 ENSG00000155269.10 GPR78 chr4 8558725 8619761 + protein_coding KNOWN OTTHUMG00000128483.10 61037 8362 37 ENSG00000109625.17 CPZ chr4 8592660 8619759 + protein_coding KNOWN OTTHUMG00000090513.13 27100 3447 56 ENSG00000250915.1 RP11-1338A24.1 chr4 8745397 8746033 - lincRNA NOVEL OTTHUMG00000161596.1 637 464 2 ENSG00000215612.6 HMX1 chr4 8846076 8871817 - protein_coding KNOWN OTTHUMG00000160012.18 25742 2144 18 ENSG00000258507.1 RP13-582L3.4 chr4 8858715 8860827 - sense_intronic NOVEL OTTHUMG00000170901.1 2113 562 2 ENSG00000197468.5 RP11-747H12.1 chr4 8949630 8950559 + unprocessed_pseudogene KNOWN OTTHUMG00000160093.1 930 930 1 ENSG00000249272.1 UNC93B8 chr4 8959628 8963981 + unprocessed_pseudogene KNOWN OTTHUMG00000160098.1 4354 705 3 ENSG00000250804.1 RP11-747H12.3 chr4 8981436 8982360 + unprocessed_pseudogene KNOWN OTTHUMG00000160096.1 925 925 1 ENSG00000249347.1 RP11-747H12.4 chr4 8990455 8990806 + processed_pseudogene KNOWN OTTHUMG00000160094.1 352 352 1 ENSG00000187815.8 ZFP69 chr1 40477215 40496343 + protein_coding KNOWN OTTHUMG00000007303.1 19129 3248 15 ENSG00000271057.1 RP11-747H12.7 chr4 9020857 9021161 - processed_pseudogene KNOWN OTTHUMG00000184922.1 305 305 1 ENSG00000238726.1 AC073648.1 chr4 9023333 9023480 - miRNA NOVEL NA 148 148 1 ENSG00000251313.1 RP11-747H12.5 chr4 9030286 9031066 + processed_pseudogene KNOWN OTTHUMG00000160095.1 781 781 1 ENSG00000250342.1 SNRPCP16 chr4 9051842 9052051 - processed_pseudogene KNOWN OTTHUMG00000160097.1 210 210 1 ENSG00000249767.1 ENPP7P10 chr4 9079023 9141608 + unprocessed_pseudogene KNOWN OTTHUMG00000160099.1 62586 933 3 ENSG00000163612.10 FAM86KP chr4 9153296 9165451 + unprocessed_pseudogene KNOWN OTTHUMG00000160154.1 12156 987 8 ENSG00000250268.3 ALG1L14P chr4 9166297 9170270 - unprocessed_pseudogene KNOWN OTTHUMG00000160157.1 3974 434 4 ENSG00000264372.1 AC108519.1 chr4 9168229 9168294 - miRNA NOVEL NA 66 66 1 ENSG00000229924.3 FAM90A26 chr4 9170409 9176730 + protein_coding KNOWN OTTHUMG00000160151.2 6322 2492 7 ENSG00000231396.2 USP17L10 chr4 9210657 9212608 + protein_coding KNOWN OTTHUMG00000160160.1 1952 1680 4 ENSG00000238287.1 RP11-656D10.3 chr1 40493157 40508661 - antisense NOVEL OTTHUMG00000007304.1 15505 605 2 ENSG00000233136.2 USP17L11 chr4 9215405 9217356 + protein_coding KNOWN OTTHUMG00000160162.1 1952 1680 4 ENSG00000227551.1 USP17L12 chr4 9220152 9221744 + protein_coding KNOWN OTTHUMG00000160148.1 1593 1593 1 ENSG00000232399.3 USP17L13 chr4 9224896 9226847 + protein_coding KNOWN OTTHUMG00000160152.1 1952 1680 4 ENSG00000249482.1 USP17L14P chr4 9229641 9231233 + unprocessed_pseudogene KNOWN OTTHUMG00000160147.1 1593 1593 1 ENSG00000223569.4 USP17L15 chr4 9234385 9365080 + protein_coding KNOWN OTTHUMG00000160155.1 130696 1742 5 ENSG00000250231.1 USP17L16P chr4 9239130 9240722 + unprocessed_pseudogene KNOWN OTTHUMG00000160161.1 1593 1593 1 ENSG00000249104.2 USP17L17 chr4 9243879 9245830 + protein_coding KNOWN OTTHUMG00000160158.1 1952 1680 4 ENSG00000250844.2 USP17L18 chr4 9248630 9250581 + protein_coding KNOWN OTTHUMG00000160153.1 1952 1680 4 ENSG00000248920.2 USP17L19 chr4 9253378 9255329 + protein_coding KNOWN OTTHUMG00000160146.1 1952 1680 4 ENSG00000250745.2 USP17L20 chr4 9258124 9260075 + protein_coding KNOWN OTTHUMG00000160150.1 1952 1680 4 ENSG00000164002.10 EXO5 chr1 40508741 40516556 + protein_coding KNOWN OTTHUMG00000007305.1 7816 3092 28 ENSG00000249811.2 USP17L21 chr4 9262872 9264823 + protein_coding KNOWN OTTHUMG00000160149.1 1952 1680 4 ENSG00000248933.2 USP17L22 chr4 9267619 9269570 + protein_coding KNOWN OTTHUMG00000160159.1 1952 1680 4 ENSG00000250913.2 USP17L23 chr4 9272364 9272914 + protein_coding KNOWN OTTHUMG00000160156.2 551 551 1 ENSG00000232264.4 USP17L24 chr4 9325165 9327116 + protein_coding KNOWN OTTHUMG00000160201.1 1952 1680 4 ENSG00000230430.4 USP17L25 chr4 9329911 9331862 + protein_coding KNOWN OTTHUMG00000160192.1 1952 1680 4 ENSG00000229579.4 USP17L26 chr4 9334658 9336609 + protein_coding KNOWN OTTHUMG00000160189.1 1952 1680 4 ENSG00000227140.3 USP17L5 chr4 9339403 9340995 + protein_coding KNOWN OTTHUMG00000160182.1 1593 1593 1 ENSG00000235780.3 USP17L27 chr4 9344148 9345740 + protein_coding KNOWN OTTHUMG00000160186.1 1593 1593 1 ENSG00000231051.3 USP17L28 chr4 9348893 9350485 + protein_coding KNOWN OTTHUMG00000160191.1 1593 1593 1 ENSG00000231637.3 USP17L29 chr4 9353638 9355230 + protein_coding KNOWN OTTHUMG00000160183.1 1593 1593 1 ENSG00000227278.1 RP11-656D10.5 chr1 40514461 40515057 - antisense NOVEL OTTHUMG00000007306.1 597 432 2 ENSG00000251694.1 USP17L9P chr4 9358383 9359975 + unprocessed_pseudogene KNOWN OTTHUMG00000160188.1 1593 1593 1 ENSG00000228856.3 USP17L30 chr4 9363129 9364721 + protein_coding KNOWN OTTHUMG00000160199.1 1593 1593 1 ENSG00000205946.1 USP17L6P chr4 9367874 9369070 + unprocessed_pseudogene KNOWN OTTHUMG00000160200.1 1197 1197 1 ENSG00000219492.4 RP11-1396O13.13 chr4 9384017 9388983 - unprocessed_pseudogene KNOWN OTTHUMG00000160185.3 4967 901 5 ENSG00000188438.4 RP11-1396O13.14 chr4 9399204 9403565 + unprocessed_pseudogene KNOWN OTTHUMG00000160193.1 4362 222 2 ENSG00000252307.1 RNA5SP153 chr4 9411178 9411253 - rRNA KNOWN NA 76 76 1 ENSG00000232773.2 RP11-1396O13.15 chr4 9422313 9429702 + unprocessed_pseudogene KNOWN OTTHUMG00000160190.1 7390 237 2 ENSG00000186146.1 DEFB131 chr4 9444534 9450514 + protein_coding KNOWN OTTHUMG00000160187.1 5981 213 2 ENSG00000248364.1 OR7E86P chr4 9459255 9460244 + unprocessed_pseudogene KNOWN OTTHUMG00000160198.2 990 990 1 ENSG00000266246.1 AC097493.1 chr4 9470968 9471055 + miRNA NOVEL NA 88 88 1 ENSG00000238186.1 RP11-656D10.6 chr1 40515754 40517174 - antisense NOVEL OTTHUMG00000007307.1 1421 546 2 ENSG00000250884.1 OR7E85P chr4 9483718 9484702 + unprocessed_pseudogene KNOWN OTTHUMG00000160195.2 985 985 1 ENSG00000251624.1 UNC93B7 chr4 9493736 9498066 + unprocessed_pseudogene KNOWN OTTHUMG00000160194.2 4331 705 3 ENSG00000249866.1 OR7E83P chr4 9512905 9513874 + unprocessed_pseudogene KNOWN OTTHUMG00000160184.2 970 970 1 ENSG00000249443.1 RP11-1396O13.22 chr4 9521910 9522276 + processed_pseudogene KNOWN OTTHUMG00000160196.2 367 367 1 ENSG00000242034.1 RP11-1396O13.1 chr4 9553614 9553985 - processed_pseudogene KNOWN OTTHUMG00000157432.2 372 372 1 ENSG00000221275.1 MIR548I2 chr4 9556168 9556316 - miRNA KNOWN NA 149 149 1 ENSG00000244004.1 RP11-1396O13.2 chr4 9563171 9563950 + processed_pseudogene KNOWN OTTHUMG00000157433.2 780 780 1 ENSG00000249799.1 SNRPCP13 chr4 9583942 9584131 - processed_pseudogene KNOWN OTTHUMG00000160247.1 190 190 1 ENSG00000250942.1 ENPP7P11 chr4 9677308 9677934 + processed_pseudogene KNOWN OTTHUMG00000160244.1 627 627 1 ENSG00000186234.7 FAM86MP chr4 9692495 9702954 + unprocessed_pseudogene KNOWN OTTHUMG00000160252.1 10460 885 8 ENSG00000117010.14 ZNF684 chr1 40531561 40548169 + protein_coding KNOWN OTTHUMG00000007359.3 16609 3039 24 ENSG00000251087.3 ALG1L3P chr4 9703754 9710812 - unprocessed_pseudogene KNOWN OTTHUMG00000160250.1 7059 765 8 ENSG00000203436.2 Metazoa_SRP chr4 9711953 9712233 - misc_RNA NOVEL NA 281 281 1 ENSG00000249563.1 RP11-751L19.1 chr4 9733370 9742361 + unprocessed_pseudogene KNOWN OTTHUMG00000160249.1 8992 541 4 ENSG00000250425.1 OR7E35P chr4 9754898 9755778 + unprocessed_pseudogene KNOWN OTTHUMG00000160248.1 881 881 1 ENSG00000109667.10 SLC2A9 chr4 9771153 10054936 - protein_coding KNOWN OTTHUMG00000044263.5 283784 6614 80 ENSG00000169676.5 DRD5 chr4 9781680 9784009 + protein_coding KNOWN OTTHUMG00000128489.1 2330 2330 1 ENSG00000252002.1 RNA5SP154 chr4 9792751 9792861 - rRNA KNOWN NA 111 111 1 ENSG00000249219.1 RP13-560N11.1 chr4 9922814 9924146 + antisense NOVEL OTTHUMG00000160246.1 1333 508 2 ENSG00000250413.1 RP11-448G15.1 chr4 10006482 10009725 + antisense NOVEL OTTHUMG00000160251.2 3244 459 2 ENSG00000261490.1 RP11-448G15.3 chr4 10068089 10073019 - sense_overlapping NOVEL OTTHUMG00000176076.1 4931 3510 2 ENSG00000268903.1 RP11-34P13.15 chr1 135141 135895 - processed_pseudogene KNOWN OTTHUMG00000182518.2 755 755 1 ENSG00000215014.4 RP5-832C2.5 chr1 1574975 1577075 + lincRNA NOVEL OTTHUMG00000186983.1 2101 2101 1 ENSG00000236505.1 RP1-63P18.2 chr1 40563534 40563659 + unprocessed_pseudogene KNOWN OTTHUMG00000007454.1 126 126 1 ENSG00000071127.15 WDR1 chr4 10074339 10116949 - protein_coding KNOWN OTTHUMG00000160253.1 42611 7827 129 ENSG00000264931.1 MIR3138 chr4 10078611 10078692 - miRNA KNOWN NA 82 82 1 ENSG00000223086.1 RNA5SP155 chr4 10115756 10115884 - rRNA KNOWN NA 129 129 1 ENSG00000250393.1 RP11-480G3.1 chr4 10143367 10143655 - processed_pseudogene KNOWN OTTHUMG00000160245.1 289 289 1 ENSG00000251296.1 AC006499.7 chr4 10167159 10167765 - processed_pseudogene KNOWN OTTHUMG00000160066.1 607 607 1 ENSG00000248777.1 AC006499.6 chr4 10199823 10200672 - processed_pseudogene KNOWN OTTHUMG00000160059.1 850 850 1 ENSG00000271544.1 AC006499.9 chr4 10238213 10238235 - processed_pseudogene KNOWN OTTHUMG00000184300.1 23 23 1 ENSG00000250040.2 RAF1P1 chr4 10254926 10256621 - processed_pseudogene KNOWN OTTHUMG00000160133.2 1696 1696 1 ENSG00000250573.1 AC006499.5 chr4 10259445 10260138 - processed_pseudogene KNOWN OTTHUMG00000160056.1 694 694 1 ENSG00000250074.1 AC006499.4 chr4 10267895 10268231 - processed_pseudogene KNOWN OTTHUMG00000160065.1 337 337 1 ENSG00000233910.1 GTF2F2P2 chr1 40593633 40594353 - processed_pseudogene KNOWN OTTHUMG00000007456.1 721 721 1 ENSG00000250505.1 AC006499.3 chr4 10284961 10285708 - processed_pseudogene KNOWN OTTHUMG00000160057.1 748 748 1 ENSG00000251278.1 AC006499.2 chr4 10292195 10292708 - processed_pseudogene KNOWN OTTHUMG00000160058.1 514 514 1 ENSG00000251338.1 AC006499.1 chr4 10294463 10295579 - processed_pseudogene KNOWN OTTHUMG00000160061.1 1117 1117 1 ENSG00000250613.1 RP11-136I13.1 chr4 10410996 10411644 + processed_pseudogene KNOWN OTTHUMG00000160015.1 649 329 2 ENSG00000178163.6 ZNF518B chr4 10439874 10457410 - protein_coding KNOWN OTTHUMG00000160060.1 17537 10905 12 ENSG00000248419.2 RP11-136I13.2 chr4 10478524 10478923 - processed_pseudogene KNOWN OTTHUMG00000160064.2 400 400 1 ENSG00000109684.13 CLNK chr4 10486395 10684865 - protein_coding KNOWN OTTHUMG00000160062.1 198471 6206 55 ENSG00000281045.1 AC005599.1 chr4 10581280 10581389 + miRNA NOVEL NA 110 110 1 ENSG00000249334.1 RP11-61G19.1 chr4 10685003 10697661 + lincRNA NOVEL OTTHUMG00000160063.2 12659 640 3 ENSG00000207716.1 MIR572 chr4 11368827 11368921 + miRNA KNOWN NA 95 95 1 ENSG00000117016.8 RIMS3 chr1 40620679 40665657 - protein_coding KNOWN OTTHUMG00000007453.1 44979 7235 16 ENSG00000250896.1 RNPS1P1 chr4 11371975 11372892 + processed_pseudogene KNOWN OTTHUMG00000160043.1 918 918 1 ENSG00000002587.8 HS3ST1 chr4 11393150 11429765 - protein_coding KNOWN OTTHUMG00000090547.4 36616 8166 6 ENSG00000222182.1 RNA5SP156 chr4 11414051 11414160 - rRNA KNOWN NA 110 110 1 ENSG00000251152.1 RP11-281P23.1 chr4 11469250 11478196 + lincRNA NOVEL OTTHUMG00000160040.1 8947 4019 2 ENSG00000249631.4 RP11-281P23.2 chr4 11625714 11813958 + lincRNA NOVEL OTTHUMG00000160044.5 188245 2016 22 ENSG00000248300.1 RP11-74M11.2 chr4 11740948 11769468 - lincRNA NOVEL OTTHUMG00000160041.1 28521 657 4 ENSG00000248262.1 RP11-1J7.1 chr4 11914667 11919688 + lincRNA NOVEL OTTHUMG00000160075.1 5022 423 2 ENSG00000266669.1 AC097452.1 chr4 12013347 12013441 - miRNA NOVEL NA 95 95 1 ENSG00000251210.4 RP11-168E17.1 chr4 12223451 12251286 + lincRNA NOVEL OTTHUMG00000160074.2 27836 968 8 ENSG00000212282.1 RNU6-578P chr4 12312588 12312690 + snRNA KNOWN NA 103 103 1 ENSG00000237899.1 RP4-739H11.3 chr1 40669089 40687588 - lincRNA NOVEL OTTHUMG00000007457.1 18500 471 5 ENSG00000249995.1 ECM1P2 chr4 12639086 12641009 + processed_pseudogene KNOWN OTTHUMG00000160087.1 1924 1577 2 ENSG00000249780.1 RP11-352E6.2 chr4 12640298 12640637 - processed_pseudogene KNOWN OTTHUMG00000160262.1 340 340 1 ENSG00000275277.1 AC096750.1 chr4 12797074 12797172 + miRNA NOVEL NA 99 99 1 ENSG00000250371.1 RP11-22A3.2 chr4 12859101 12864961 - lincRNA NOVEL OTTHUMG00000161598.1 5861 2694 2 ENSG00000250098.1 RP11-22A3.1 chr4 12947574 12948670 - lincRNA NOVEL OTTHUMG00000161597.1 1097 316 2 ENSG00000205940.8 HSP90AB2P chr4 13333414 13338657 + transcribed_processed_pseudogene KNOWN OTTHUMG00000160089.2 5244 2299 5 ENSG00000157869.13 RAB28 chr4 13361354 13484365 - protein_coding KNOWN OTTHUMG00000090543.2 123012 2221 49 ENSG00000281202.1 LINC01097 chr4 13526319 13534335 - lincRNA KNOWN OTTHUMG00000189540.1 8017 2226 11 ENSG00000109705.7 NKX3-2 chr4 13540830 13545050 - protein_coding KNOWN OTTHUMG00000090657.3 4221 2801 2 ENSG00000246095.2 LINC01096 chr4 13546075 13547801 - lincRNA NOVEL OTTHUMG00000160090.1 1727 1264 4 ENSG00000272145.1 NFYC-AS1 chr1 40690380 40692066 - antisense NOVEL OTTHUMG00000185712.1 1687 1687 1 ENSG00000038219.11 BOD1L1 chr4 13568738 13627723 - protein_coding KNOWN OTTHUMG00000090659.4 58986 15860 52 ENSG00000281620.1 AC006445.1 chr4 13627442 13627591 + protein_coding NOVEL NA 150 120 2 ENSG00000266240.1 MIR5091 chr4 13627865 13627957 + miRNA KNOWN NA 93 93 1 ENSG00000249148.2 AC006445.7 chr4 13631820 13632599 - processed_pseudogene KNOWN OTTHUMG00000160088.2 780 472 2 ENSG00000242209.1 AC006445.6 chr4 13647697 13648400 - processed_pseudogene KNOWN OTTHUMG00000157436.1 704 405 2 ENSG00000250634.4 LINC01182 chr4 13655179 13977075 + lincRNA NOVEL OTTHUMG00000160104.2 321897 2742 9 ENSG00000281488.1 AC098830.1 chr4 13658627 13658713 + miRNA NOVEL NA 87 87 1 ENSG00000250497.1 AC007126.1 chr4 13777377 13782157 - lincRNA NOVEL OTTHUMG00000160355.1 4781 4781 1 ENSG00000224569.3 RP11-341G5.2 chr4 13977166 13978028 + processed_pseudogene KNOWN OTTHUMG00000160102.2 863 863 1 ENSG00000248698.4 LINC01085 chr4 14111968 14140052 + lincRNA NOVEL OTTHUMG00000160101.2 28085 2342 13 ENSG00000066136.18 NFYC chr1 40691570 40771603 + protein_coding KNOWN OTTHUMG00000007729.4 80034 6068 182 ENSG00000251317.1 KLF17P2 chr4 14126339 14126664 + transcribed_processed_pseudogene KNOWN OTTHUMG00000160356.1 326 326 1 ENSG00000251679.1 RP11-669M16.2 chr4 14134936 14143592 + lincRNA NOVEL OTTHUMG00000160100.1 8657 457 3 ENSG00000249988.1 RP11-669M16.1 chr4 14164455 14242813 + lincRNA NOVEL OTTHUMG00000160103.2 78359 649 5 ENSG00000251412.1 AC006296.1 chr4 14383123 14409078 - lincRNA NOVEL OTTHUMG00000160106.1 25956 764 6 ENSG00000248425.1 AC006296.2 chr4 14390439 14393992 + lincRNA NOVEL OTTHUMG00000160105.1 3554 591 2 ENSG00000248360.6 LINC00504 chr4 14470465 14888169 - lincRNA NOVEL OTTHUMG00000160121.6 417705 5095 23 ENSG00000251252.1 MTND2P31 chr4 14505865 14506480 - processed_pseudogene KNOWN OTTHUMG00000160120.1 616 616 1 ENSG00000202449.1 SNORA63 chr4 14690710 14690832 + snoRNA NOVEL NA 123 123 1 ENSG00000247624.5 CPEB2-AS1 chr4 14909961 15002045 - lincRNA NOVEL OTTHUMG00000160381.3 92085 3089 13 ENSG00000137449.14 CPEB2 chr4 15002674 15070153 + protein_coding KNOWN OTTHUMG00000090669.2 67480 7177 84 ENSG00000198974.2 MIR30E chr1 40754351 40754463 + miRNA KNOWN NA 113 113 1 ENSG00000249252.4 RP11-665G4.1 chr4 15004942 15427914 - antisense NOVEL OTTHUMG00000160132.3 422973 907 11 ENSG00000199420.1 RN7SKP170 chr4 15093767 15094094 - misc_RNA KNOWN NA 328 328 1 ENSG00000163145.11 C1QTNF7 chr4 15339818 15446166 + protein_coding KNOWN OTTHUMG00000097095.4 106349 5583 20 ENSG00000251379.1 RP11-484O2.1 chr4 15358141 15420032 - antisense NOVEL OTTHUMG00000160269.1 61892 871 4 ENSG00000048342.14 CC2D2A chr4 15469865 15601557 + protein_coding KNOWN OTTHUMG00000160255.11 131693 7564 216 ENSG00000249930.1 AC007016.3 chr4 15492729 15492972 - processed_pseudogene KNOWN OTTHUMG00000160270.1 244 244 1 ENSG00000273133.1 RP11-799M12.2 chr4 15563698 15564253 - antisense NOVEL OTTHUMG00000186247.1 556 556 1 ENSG00000118564.13 FBXL5 chr4 15604539 15681679 - protein_coding KNOWN OTTHUMG00000097097.3 77141 4573 83 ENSG00000237765.5 FAM200B chr4 15681662 15705565 + protein_coding KNOWN OTTHUMG00000160279.2 23904 4817 72 ENSG00000109743.9 BST1 chr4 15702950 15738313 + protein_coding KNOWN OTTHUMG00000097739.2 35364 2980 38 ENSG00000207962.1 MIR30C1 chr1 40757284 40757372 + miRNA KNOWN NA 89 89 1 ENSG00000214846.4 RP11-115L11.1 chr4 15730962 15731627 - processed_pseudogene KNOWN OTTHUMG00000157437.1 666 666 1 ENSG00000248188.2 RP11-442P12.2 chr4 15743196 15743582 + processed_pseudogene KNOWN OTTHUMG00000160271.2 387 387 1 ENSG00000004468.11 CD38 chr4 15778275 15853230 + protein_coding KNOWN OTTHUMG00000048206.4 74956 6855 26 ENSG00000251644.1 RP11-442P12.1 chr4 15864938 15865940 - processed_pseudogene KNOWN OTTHUMG00000160176.1 1003 657 3 ENSG00000137440.4 FGFBP1 chr4 15935569 15938740 - protein_coding KNOWN OTTHUMG00000097745.1 3172 1359 3 ENSG00000137441.7 FGFBP2 chr4 15960243 15969309 - protein_coding KNOWN OTTHUMG00000128513.2 9067 1250 4 ENSG00000007062.10 PROM1 chr4 15963076 16084378 - protein_coding KNOWN OTTHUMG00000160180.4 121303 7434 221 ENSG00000169762.15 TAPT1 chr4 16160505 16227410 - protein_coding KNOWN OTTHUMG00000160177.2 66906 7828 90 ENSG00000249234.1 RP11-452J21.2 chr4 16178939 16183120 + antisense NOVEL OTTHUMG00000160178.1 4182 414 2 ENSG00000263327.5 TAPT1-AS1 chr4 16226685 16320140 + antisense NOVEL OTTHUMG00000160321.2 93456 2763 10 ENSG00000117013.13 KCNQ4 chr1 40784012 40840452 + protein_coding KNOWN OTTHUMG00000007730.3 56441 4183 51 ENSG00000242358.1 RPS21P4 chr4 16256308 16256555 - processed_pseudogene KNOWN OTTHUMG00000157438.1 248 248 1 ENSG00000248851.1 AC006427.2 chr4 16307456 16308167 + processed_pseudogene KNOWN OTTHUMG00000160175.1 712 712 1 ENSG00000249506.3 ZEB2P1 chr4 16360686 16397323 - transcribed_processed_pseudogene KNOWN OTTHUMG00000160179.3 36638 1938 4 ENSG00000248138.4 RP11-446J8.1 chr4 16400430 16512187 + antisense NOVEL OTTHUMG00000160203.1 111758 730 7 ENSG00000169744.11 LDB2 chr4 16501541 16898809 - protein_coding KNOWN OTTHUMG00000048212.3 397269 5586 95 ENSG00000249998.1 RP11-141E13.1 chr4 16973275 17073903 - lincRNA NOVEL OTTHUMG00000160229.1 100629 451 3 ENSG00000251212.1 MTND5P4 chr4 17061878 17062165 + processed_pseudogene KNOWN OTTHUMG00000160230.1 288 288 1 ENSG00000250819.1 RP11-576E20.1 chr4 17171757 17186059 - lincRNA NOVEL OTTHUMG00000160219.1 14303 1704 6 ENSG00000206780.1 SNORA75 chr4 17320746 17320882 - snoRNA NOVEL NA 137 137 1 ENSG00000215278.4 RPS7P6 chr4 17427696 17428274 - processed_pseudogene KNOWN OTTHUMG00000157441.1 579 579 1 ENSG00000264582.2 RN7SL326P chr1 40804846 40805141 + misc_RNA KNOWN NA 296 296 1 ENSG00000151552.10 QDPR chr4 17460261 17512234 - protein_coding KNOWN OTTHUMG00000128537.3 51974 3059 48 ENSG00000249581.2 CLRN2 chr4 17515165 17527104 + protein_coding KNOWN OTTHUMG00000160273.2 11940 823 3 ENSG00000249488.1 NACAP5 chr4 17552117 17552752 - processed_pseudogene KNOWN OTTHUMG00000160274.1 636 636 1 ENSG00000002549.11 LAP3 chr4 17577192 17607972 + protein_coding KNOWN OTTHUMG00000048214.6 30781 3785 78 ENSG00000249502.1 AC006160.5 chr4 17587467 17614571 - antisense NOVEL OTTHUMG00000160283.1 27105 750 3 ENSG00000118579.10 MED28 chr4 17614631 17634105 + protein_coding KNOWN OTTHUMG00000161980.3 19475 10982 19 ENSG00000047662.4 FAM184B chr4 17629306 17781512 - protein_coding KNOWN OTTHUMG00000160287.2 152207 6622 18 ENSG00000163257.9 DCAF16 chr4 17800655 17810758 - protein_coding KNOWN OTTHUMG00000128536.3 10104 4816 7 ENSG00000109805.8 NCAPG chr4 17810902 17844862 + protein_coding KNOWN OTTHUMG00000128539.2 33961 4921 54 ENSG00000178177.13 LCORL chr4 17841199 18021876 - protein_coding KNOWN OTTHUMG00000128538.5 180678 10032 34 ENSG00000279244.1 AL645728.1 chr1 1579756 1580046 + protein_coding KNOWN NA 291 276 3 ENSG00000179862.6 CITED4 chr1 40861051 40862366 - protein_coding KNOWN OTTHUMG00000007728.1 1316 1316 1 ENSG00000235413.3 KRT18P63 chr4 17911674 17912976 + processed_pseudogene KNOWN OTTHUMG00000160322.1 1303 979 2 ENSG00000251048.1 RP11-608B3.1 chr4 18488062 18489508 - lincRNA NOVEL OTTHUMG00000160241.1 1447 534 2 ENSG00000279918.1 AC006840.1 chr4 19098199 19098740 + TEC KNOWN OTTHUMG00000161627.1 542 542 1 ENSG00000248238.1 RP11-3J1.1 chr4 19172335 19456994 - lincRNA NOVEL OTTHUMG00000160243.1 284660 641 3 ENSG00000251816.1 RNA5SP157 chr4 19181814 19181856 - rRNA KNOWN NA 43 43 1 ENSG00000279379.1 RP11-84N19.1 chr4 19257951 19258337 - TEC KNOWN OTTHUMG00000161626.1 387 387 1 ENSG00000248515.1 RP11-608O21.1 chr4 19455436 19909692 + lincRNA NOVEL OTTHUMG00000160142.1 454257 889 4 ENSG00000249441.1 RP11-94H6.1 chr4 19747179 19754591 - lincRNA NOVEL OTTHUMG00000161628.1 7413 239 2 ENSG00000241612.1 RP13-585F24.1 chr4 19813749 19814231 + processed_pseudogene KNOWN OTTHUMG00000157442.1 483 483 1 ENSG00000250611.1 RP11-339D20.1 chr4 20037560 20037972 - processed_pseudogene KNOWN OTTHUMG00000160240.1 413 413 1 ENSG00000229528.1 RP5-1066H13.4 chr1 40863914 40876670 + antisense NOVEL OTTHUMG00000007731.1 12757 471 3 ENSG00000145147.18 SLIT2 chr4 20253260 20620561 + protein_coding KNOWN OTTHUMG00000128551.3 367302 9712 222 ENSG00000248228.1 SLIT2-IT1 chr4 20392189 20394856 + sense_intronic NOVEL OTTHUMG00000160239.1 2668 601 4 ENSG00000207732.1 MIR218-1 chr4 20528275 20528384 + miRNA KNOWN NA 110 110 1 ENSG00000163138.17 PACRGL chr4 20696282 20752907 + protein_coding KNOWN OTTHUMG00000128550.16 56626 4032 196 ENSG00000185774.13 KCNIP4 chr4 20728616 21948799 - protein_coding KNOWN OTTHUMG00000128557.10 1220184 4140 70 ENSG00000272995.1 RP11-362J17.1 chr4 20766808 20767372 + antisense NOVEL OTTHUMG00000186259.1 565 565 1 ENSG00000250243.2 RP11-120A1.1 chr4 21304542 21316485 + antisense NOVEL OTTHUMG00000160928.3 11944 341 3 ENSG00000250092.2 RP11-556G22.3 chr4 21582096 21613728 + antisense NOVEL OTTHUMG00000160925.3 31633 721 4 ENSG00000242768.2 RP11-556G22.1 chr4 21656511 21656869 - processed_pseudogene KNOWN OTTHUMG00000157443.2 359 359 1 ENSG00000248343.1 RP11-556G22.2 chr4 21697450 21719026 + antisense NOVEL OTTHUMG00000160927.1 21577 948 2 ENSG00000228940.1 RP11-348A7.1 chr1 40938104 40939763 - unprocessed_pseudogene KNOWN OTTHUMG00000005715.1 1660 921 3 ENSG00000280650.1 KCNIP4-IT1 chr4 21843341 21853188 - lincRNA KNOWN OTTHUMG00000189553.1 9848 9848 1 ENSG00000250039.3 RP11-17E2.2 chr4 21949015 22330330 + antisense NOVEL OTTHUMG00000162099.4 381316 1874 4 ENSG00000239001.1 RNU6-420P chr4 22118983 22119089 + snRNA KNOWN NA 107 107 1 ENSG00000152990.12 GPR125 chr4 22345071 22516054 - protein_coding KNOWN OTTHUMG00000160926.11 170984 9250 95 ENSG00000273832.1 AC098583.1 chr4 22579041 22579146 + miRNA NOVEL NA 106 106 1 ENSG00000244538.1 RP11-10G12.1 chr4 22594196 22594450 + processed_pseudogene KNOWN OTTHUMG00000157444.1 255 255 1 ENSG00000251516.1 RP11-10G12.2 chr4 22607501 22611063 + unprocessed_pseudogene KNOWN OTTHUMG00000160447.2 3563 372 4 ENSG00000249948.5 GBA3 chr4 22692914 22819575 + polymorphic_pseudogene KNOWN OTTHUMG00000160448.4 126662 2932 27 ENSG00000237350.1 CDC42P6 chr4 22727375 22727950 - processed_pseudogene KNOWN OTTHUMG00000160449.1 576 576 1 ENSG00000248837.4 RP11-412P11.1 chr4 22997551 23056862 + lincRNA NOVEL OTTHUMG00000160256.1 59312 2175 10 ENSG00000273910.1 AL391730.1 chr1 40939661 40939767 + miRNA NOVEL NA 107 107 1 ENSG00000249645.1 RP11-552M14.1 chr4 23105502 23123487 + lincRNA NOVEL OTTHUMG00000160257.1 17986 546 5 ENSG00000249547.1 RP11-453O5.1 chr4 23234625 23285573 - lincRNA NOVEL OTTHUMG00000160259.1 50949 571 2 ENSG00000251220.2 RFPL4AP3 chr4 23514940 23515284 - processed_pseudogene KNOWN OTTHUMG00000160258.2 345 345 1 ENSG00000250137.1 RP11-380P13.1 chr4 23560923 23768652 + antisense NOVEL OTTHUMG00000160278.1 207730 703 4 ENSG00000251292.1 ERVH-1 chr4 23723262 23733579 - lincRNA NOVEL OTTHUMG00000160276.1 10318 639 4 ENSG00000109819.7 PPARGC1A chr4 23755041 23904089 - protein_coding KNOWN OTTHUMG00000097747.2 149049 10870 113 ENSG00000249453.1 RP13-497K6.1 chr4 23779590 23782560 + antisense NOVEL OTTHUMG00000160277.1 2971 442 3 ENSG00000222262.1 AC092846.1 chr4 24421176 24421301 - miRNA NOVEL NA 126 126 1 ENSG00000109606.11 DHX15 chr4 24517441 24584550 - protein_coding KNOWN OTTHUMG00000160304.1 67110 8162 39 ENSG00000207697.1 MIR573 chr4 24520192 24520290 - miRNA KNOWN NA 99 99 1 ENSG00000233118.2 UBE2V1P8 chr1 40942251 40942515 - processed_pseudogene KNOWN OTTHUMG00000005718.2 265 265 1 ENSG00000243005.3 RN7SL16P chr4 24563193 24563461 - misc_RNA KNOWN NA 269 269 1 ENSG00000249256.2 ATP5LP3 chr4 24658072 24658375 - processed_pseudogene KNOWN OTTHUMG00000160306.2 304 304 1 ENSG00000261121.1 RP11-496D24.2 chr4 24659856 24671568 + lincRNA NOVEL OTTHUMG00000176117.1 11713 2195 2 ENSG00000251638.1 AC006390.4 chr4 24768049 24768331 + processed_pseudogene KNOWN OTTHUMG00000160305.1 283 283 1 ENSG00000248444.1 HNRNPA1P65 chr4 24771467 24772420 + processed_pseudogene KNOWN OTTHUMG00000160307.1 954 954 1 ENSG00000109610.5 SOD3 chr4 24789912 24800842 + protein_coding KNOWN OTTHUMG00000128565.2 10931 2128 7 ENSG00000181982.16 CCDC149 chr4 24806117 24980204 - protein_coding KNOWN OTTHUMG00000160308.1 174088 9580 47 ENSG00000153012.10 LGI2 chr4 24998847 25030879 - protein_coding KNOWN OTTHUMG00000097749.2 32033 6428 15 ENSG00000109618.10 SEPSECS chr4 25120014 25160442 - protein_coding KNOWN OTTHUMG00000128563.3 40429 6232 46 ENSG00000281501.1 SEPSECS-AS1 chr4 25160641 25201440 + antisense KNOWN OTTHUMG00000189520.1 40800 4356 4 ENSG00000171793.12 CTPS1 chr1 40979335 41012565 + protein_coding KNOWN OTTHUMG00000005712.2 33231 5462 86 ENSG00000281028.1 PI4K2B chr4 25160663 25277306 + protein_coding NOVEL OTTHUMG00000189521.1 116644 1388 10 ENSG00000271172.1 RP11-660M5.1 chr4 25220403 25220913 + lincRNA NOVEL OTTHUMG00000185111.1 511 511 1 ENSG00000038210.12 PI4K2B chr4 25233975 25279092 + protein_coding KNOWN OTTHUMG00000128564.2 45118 3540 10 ENSG00000278135.1 U2 chr4 25250545 25250639 + snRNA NOVEL NA 95 95 1 ENSG00000168228.13 ZCCHC4 chr4 25312785 25370383 + protein_coding KNOWN OTTHUMG00000160563.1 57599 4400 56 ENSG00000264496.1 AC108218.1 chr4 25353970 25354071 + miRNA NOVEL NA 102 102 1 ENSG00000053900.9 ANAPC4 chr4 25377213 25418498 + protein_coding KNOWN OTTHUMG00000097753.3 41286 7494 111 ENSG00000249320.1 RP11-206P5.1 chr4 25472517 25473815 + processed_pseudogene KNOWN OTTHUMG00000160587.1 1299 578 3 ENSG00000248608.2 RP11-206P5.2 chr4 25504997 25506675 + processed_pseudogene KNOWN OTTHUMG00000160586.2 1679 1679 1 ENSG00000238632.1 RNU7-126P chr4 25598564 25598625 - snRNA KNOWN NA 62 62 1 ENSG00000281712.1 AL391730.2 chr1 40984853 40984919 - miRNA NOVEL NA 67 67 1 ENSG00000248545.2 RP11-302F12.3 chr4 25608711 25619468 + lincRNA NOVEL OTTHUMG00000160281.2 10758 411 2 ENSG00000228154.3 RP11-302F12.2 chr4 25622777 25623601 + processed_pseudogene KNOWN OTTHUMG00000160280.1 825 503 2 ENSG00000157765.10 SLC34A2 chr4 25655301 25678748 + protein_coding KNOWN OTTHUMG00000097757.3 23448 4699 54 ENSG00000242640.1 RP11-302F12.1 chr4 25678850 25679020 + processed_pseudogene KNOWN OTTHUMG00000157445.1 171 171 1 ENSG00000249277.1 RP11-302F12.4 chr4 25686202 25686458 - processed_pseudogene KNOWN OTTHUMG00000160333.1 257 257 1 ENSG00000250050.1 MTND4P9 chr4 25718082 25719745 - unprocessed_pseudogene KNOWN OTTHUMG00000160336.1 1664 1346 2 ENSG00000248133.1 RP11-302F12.7 chr4 25719755 25720030 - unprocessed_pseudogene KNOWN OTTHUMG00000160334.1 276 276 1 ENSG00000251353.1 MTND3P5 chr4 25720099 25720431 - unprocessed_pseudogene KNOWN OTTHUMG00000160335.1 333 333 1 ENSG00000248654.1 RP11-302F12.5 chr4 25720516 25721056 - unprocessed_pseudogene KNOWN OTTHUMG00000160338.1 541 541 1 ENSG00000091490.9 SEL1L3 chr4 25747427 25863760 - protein_coding KNOWN OTTHUMG00000160331.3 116334 7489 104 ENSG00000281207.1 SLFNL1-AS1 chr1 41014590 41043890 + antisense KNOWN OTTHUMG00000189531.1 29301 4800 4 ENSG00000250541.1 RP11-302F12.10 chr4 25770266 25773577 + antisense NOVEL OTTHUMG00000160337.1 3312 483 2 ENSG00000250317.7 SMIM20 chr4 25861830 25929874 + protein_coding KNOWN OTTHUMG00000160330.3 68045 1612 14 ENSG00000251009.2 RP13-494C23.1 chr4 25864881 25869550 - lincRNA NOVEL OTTHUMG00000160332.1 4670 762 2 ENSG00000248452.2 RP11-324H7.1 chr4 26111865 26113839 + processed_pseudogene KNOWN OTTHUMG00000160301.2 1975 1647 2 ENSG00000168214.19 RBPJ chr4 26163455 26435131 + protein_coding KNOWN OTTHUMG00000097793.9 271677 9253 202 ENSG00000163394.5 CCKAR chr4 26481400 26490462 - protein_coding KNOWN OTTHUMG00000128567.2 9063 1720 5 ENSG00000109680.9 TBC1D19 chr4 26576437 26755351 + protein_coding KNOWN OTTHUMG00000097797.3 178915 3434 110 ENSG00000265627.1 AC093807.1 chr4 26637390 26637490 - miRNA NOVEL NA 101 101 1 ENSG00000281715.1 AC093807.2 chr4 26668020 26668119 - miRNA NOVEL NA 100 100 1 ENSG00000200999.1 SNORD74 chr4 26702309 26702388 + snoRNA NOVEL NA 80 80 1 ENSG00000171790.14 SLFNL1 chr1 41015597 41023237 - protein_coding KNOWN OTTHUMG00000005719.1 7641 4310 24 ENSG00000109689.13 STIM2 chr4 26857678 27025381 + protein_coding KNOWN OTTHUMG00000097805.5 167704 6909 71 ENSG00000240005.4 RP11-293A21.1 chr4 26859806 26860599 - antisense NOVEL OTTHUMG00000159680.2 794 589 6 ENSG00000248340.2 RP11-293A21.2 chr4 26873561 26874349 - processed_pseudogene KNOWN OTTHUMG00000160326.2 789 743 2 ENSG00000251080.1 RP11-415C15.1 chr4 27133996 27140051 - lincRNA NOVEL OTTHUMG00000161693.1 6056 482 3 ENSG00000205830.1 AC024132.1 chr4 27207505 27218404 - lincRNA NOVEL OTTHUMG00000150675.1 10900 2509 2 ENSG00000249699.1 RP11-415C15.2 chr4 27217479 27282225 + lincRNA NOVEL OTTHUMG00000161689.1 64747 2802 6 ENSG00000222206.1 Y_RNA chr4 27223319 27223427 - misc_RNA NOVEL NA 109 109 1 ENSG00000251325.1 RP11-415C15.3 chr4 27262506 27267254 - lincRNA NOVEL OTTHUMG00000161691.1 4749 649 2 ENSG00000250858.1 IGBP1P5 chr4 27585145 27586144 + processed_pseudogene KNOWN OTTHUMG00000160327.1 1000 1000 1 ENSG00000251410.1 AC007106.1 chr4 27967723 27985063 - lincRNA NOVEL OTTHUMG00000161695.1 17341 600 2 ENSG00000010803.15 SCMH1 chr1 41027200 41242154 - protein_coding KNOWN OTTHUMG00000005720.3 214955 4447 174 ENSG00000250038.4 RP11-180C1.1 chr4 28362279 28402864 - lincRNA NOVEL OTTHUMG00000161692.1 40586 1304 9 ENSG00000250064.1 RP11-123O22.1 chr4 28435449 28600275 + lincRNA NOVEL OTTHUMG00000160318.1 164827 712 4 ENSG00000243548.3 RN7SL101P chr4 28711198 28711476 + misc_RNA KNOWN NA 279 279 1 ENSG00000281784.1 AC096566.1 chr4 28811500 28811667 - miRNA NOVEL NA 168 168 1 ENSG00000250927.1 MESTP3 chr4 28823244 28824211 - processed_pseudogene KNOWN OTTHUMG00000160398.1 968 968 1 ENSG00000250190.1 RP11-292B1.2 chr4 28996524 29014594 + lincRNA NOVEL OTTHUMG00000160395.1 18071 687 3 ENSG00000276507.1 RP11-769N22.2 chr4 29010619 29011021 - processed_pseudogene KNOWN OTTHUMG00000187575.1 403 403 1 ENSG00000249228.1 RP11-769N22.1 chr4 29046591 29048765 + lincRNA NOVEL OTTHUMG00000160396.1 2175 1604 2 ENSG00000248176.1 RP11-472K22.1 chr4 29118308 29202770 + lincRNA NOVEL OTTHUMG00000161694.1 84463 758 3 ENSG00000248338.1 RP11-472K22.2 chr4 29214398 29221162 + lincRNA NOVEL OTTHUMG00000161690.1 6765 575 3 ENSG00000274481.1 RP11-345P4.11 chr1 1583510 1583909 - processed_pseudogene KNOWN OTTHUMG00000187518.1 400 400 1 ENSG00000215893.3 RP4-635E8.1 chr1 41098638 41099136 + processed_pseudogene KNOWN OTTHUMG00000005717.2 499 499 1 ENSG00000251373.1 RP11-68D16.1 chr4 29407100 29408012 + processed_pseudogene KNOWN OTTHUMG00000160343.1 913 913 1 ENSG00000251113.2 RP11-68D16.2 chr4 29465701 29467850 - processed_pseudogene KNOWN OTTHUMG00000160344.2 2150 1815 2 ENSG00000249542.2 EEF1A1P21 chr4 29748757 29750100 + processed_pseudogene KNOWN OTTHUMG00000160342.2 1344 1344 1 ENSG00000212045.1 AC109351.1 chr4 29750196 29750310 + miRNA NOVEL NA 115 115 1 ENSG00000249564.1 RP11-390C19.1 chr4 29907659 29907791 - processed_pseudogene KNOWN OTTHUMG00000160341.1 133 133 1 ENSG00000244031.3 RPS3AP17 chr4 29962644 29963758 - processed_pseudogene KNOWN OTTHUMG00000157446.3 1115 777 2 ENSG00000248281.1 RP11-174E22.2 chr4 30006951 30008316 - processed_pseudogene KNOWN OTTHUMG00000160340.1 1366 992 2 ENSG00000169851.14 PCDH7 chr4 30720415 31146805 + protein_coding KNOWN OTTHUMG00000160364.4 426391 12249 21 ENSG00000249678.1 RP11-619J20.1 chr4 30776257 30793970 - antisense NOVEL OTTHUMG00000160365.1 17714 180 3 ENSG00000250624.1 RP11-93M12.1 chr4 30884443 30885182 - unprocessed_pseudogene KNOWN OTTHUMG00000160366.1 740 740 1 ENSG00000235358.1 RP11-399E6.1 chr1 41242373 41284861 + lincRNA KNOWN OTTHUMG00000005710.1 42489 1468 8 ENSG00000251182.1 RP11-617I14.1 chr4 31171144 31211675 + lincRNA NOVEL OTTHUMG00000160369.1 40532 507 5 ENSG00000278814.1 AC104071.1 chr4 31349786 31349874 - miRNA NOVEL NA 89 89 1 ENSG00000251434.1 RP11-315A17.1 chr4 31350284 31351725 + lincRNA NOVEL OTTHUMG00000160363.1 1442 602 2 ENSG00000249882.1 RP11-665I14.1 chr4 31506666 31558821 + lincRNA NOVEL OTTHUMG00000160367.1 52156 426 3 ENSG00000251129.1 RP11-734I18.1 chr4 31997397 32155406 + lincRNA NOVEL OTTHUMG00000160440.1 158010 734 3 ENSG00000251329.1 RP11-240A16.1 chr4 32351038 32353220 + lincRNA NOVEL OTTHUMG00000160346.1 2183 849 2 ENSG00000250076.1 RP11-141P6.1 chr4 33010948 33011746 - processed_pseudogene KNOWN OTTHUMG00000160348.1 799 799 1 ENSG00000249452.2 RP11-638O6.1 chr4 33238239 33238670 - processed_pseudogene KNOWN OTTHUMG00000160353.2 432 432 1 ENSG00000249766.1 RP11-802H3.1 chr4 33400538 33400679 + processed_pseudogene KNOWN OTTHUMG00000160351.1 142 142 1 ENSG00000248417.1 RP11-802H3.2 chr4 33433510 33437877 + lincRNA NOVEL OTTHUMG00000160350.1 4368 332 2 ENSG00000213987.4 RP11-399E6.2 chr1 41264550 41264862 - processed_pseudogene KNOWN OTTHUMG00000005711.2 313 313 1 ENSG00000265035.1 AC079772.1 chr4 33536744 33536842 + miRNA NOVEL NA 99 99 1 ENSG00000250954.4 RP11-79E3.3 chr4 33776347 34039893 - lincRNA NOVEL OTTHUMG00000160354.3 263547 2680 8 ENSG00000250723.4 RP11-79E3.2 chr4 33850591 33979936 + lincRNA NOVEL OTTHUMG00000160349.1 129346 1207 13 ENSG00000239983.1 RP11-79E3.1 chr4 33968174 33968526 + processed_pseudogene KNOWN OTTHUMG00000157448.1 353 353 1 ENSG00000248685.4 RP11-548L20.1 chr4 34120894 34269747 - lincRNA NOVEL OTTHUMG00000160362.1 148854 989 8 ENSG00000263814.1 AC093786.1 chr4 34386754 34386837 - miRNA NOVEL NA 84 84 1 ENSG00000250597.4 RP11-725M22.1 chr4 34657606 34669432 + lincRNA NOVEL OTTHUMG00000160471.1 11827 545 8 ENSG00000275250.1 RP11-768G3.1 chr4 34714270 34714598 + processed_pseudogene KNOWN OTTHUMG00000187589.1 329 329 1 ENSG00000238694.1 snoU13 chr4 34966241 34966344 - snoRNA NOVEL NA 104 104 1 ENSG00000250416.2 SEC63P2 chr4 35487812 35489750 + processed_pseudogene KNOWN OTTHUMG00000160374.2 1939 1939 1 ENSG00000281479.1 AC093151.2 chr1 41332111 41332244 + miRNA NOVEL NA 134 134 1 ENSG00000206665.1 RNU6-573P chr4 35495898 35496003 + snRNA KNOWN NA 106 106 1 ENSG00000047365.10 ARAP2 chr4 35948221 36244509 - protein_coding KNOWN OTTHUMG00000097811.4 296289 12428 97 ENSG00000248466.1 RP11-640B6.1 chr4 36065060 36065726 - processed_pseudogene KNOWN OTTHUMG00000160391.1 667 667 1 ENSG00000247193.2 RP11-431M7.3 chr4 36244116 36274220 + antisense NOVEL OTTHUMG00000160372.1 30105 1785 8 ENSG00000197057.7 DTHD1 chr4 36281622 36345756 + protein_coding KNOWN OTTHUMG00000160371.2 64135 5618 32 ENSG00000251438.1 RP11-431M7.2 chr4 36311190 36392410 - antisense NOVEL OTTHUMG00000160373.1 81221 541 3 ENSG00000248215.4 RP11-722M1.1 chr4 36496537 36641900 - lincRNA NOVEL OTTHUMG00000161702.1 145364 1626 13 ENSG00000251588.2 RP11-698E18.1 chr4 36506043 36508869 + processed_pseudogene KNOWN OTTHUMG00000160370.2 2827 2827 1 ENSG00000261761.3 RP11-103J17.2 chr4 37001816 37020708 + processed_transcript NOVEL OTTHUMG00000175975.1 18893 2534 3 ENSG00000247810.5 RP11-103J17.1 chr4 37078577 37125424 + lincRNA NOVEL OTTHUMG00000160388.1 46848 840 6 ENSG00000204060.5 FOXO6 chr1 41361922 41383590 + protein_coding KNOWN OTTHUMG00000005713.1 21669 2398 5 ENSG00000264319.1 MIR4801 chr4 37241910 37241991 - miRNA KNOWN NA 82 82 1 ENSG00000174145.7 NWD2 chr4 37244220 37449465 + protein_coding KNOWN OTTHUMG00000157134.2 205246 8325 7 ENSG00000154274.13 C4orf19 chr4 37453941 37623495 + protein_coding KNOWN OTTHUMG00000128580.2 169555 2770 11 ENSG00000248936.1 RP11-36B15.1 chr4 37588087 37588875 - antisense NOVEL OTTHUMG00000160390.1 789 534 2 ENSG00000181826.8 RELL1 chr4 37590800 37686376 - protein_coding KNOWN OTTHUMG00000160389.5 95577 1947 19 ENSG00000207075.1 Y_RNA chr4 37699895 37700002 - misc_RNA NOVEL NA 108 108 1 ENSG00000273527.1 AC108022.1 chr4 37781892 37781980 + miRNA NOVEL NA 89 89 1 ENSG00000239532.1 RP11-9D8.1 chr4 37821361 37821838 + processed_pseudogene KNOWN OTTHUMG00000157450.1 478 478 1 ENSG00000169299.12 PGM2 chr4 37826633 37862937 + protein_coding KNOWN OTTHUMG00000097813.3 36305 3704 55 ENSG00000279386.1 GAFA3 chr4 37866561 37867091 - protein_coding KNOWN NA 531 531 1 ENSG00000229901.1 RP11-399E6.4 chr1 41375004 41375669 - antisense KNOWN OTTHUMG00000005714.1 666 394 2 ENSG00000249863.2 RP11-177C12.1 chr4 37868292 37869978 + processed_pseudogene KNOWN OTTHUMG00000160411.2 1687 1058 2 ENSG00000065882.14 TBC1D1 chr4 37891087 38139175 + protein_coding KNOWN OTTHUMG00000150302.8 248089 9032 138 ENSG00000250254.1 PTTG2 chr4 37960435 37961125 + protein_coding KNOWN OTTHUMG00000160424.1 691 691 1 ENSG00000251332.1 RP11-177C12.4 chr4 37995494 37996203 - processed_pseudogene KNOWN OTTHUMG00000160425.1 710 710 1 ENSG00000249649.1 MRPS33P2 chr4 38006784 38007105 - processed_pseudogene KNOWN OTTHUMG00000160426.1 322 322 1 ENSG00000280678.1 AC108933.1 chr4 38089944 38090036 - miRNA NOVEL NA 93 93 1 ENSG00000221495.1 AC098680.1 chr4 38238613 38238696 + miRNA NOVEL NA 84 84 1 ENSG00000251642.1 RP11-600L4.1 chr4 38286994 38287491 + lincRNA NOVEL OTTHUMG00000160427.1 498 367 2 ENSG00000248227.1 RP11-83C7.1 chr4 38366914 38385759 + lincRNA NOVEL OTTHUMG00000160385.1 18846 500 2 ENSG00000280015.1 RP11-83C7.3 chr4 38390754 38391675 + TEC KNOWN OTTHUMG00000176139.1 922 922 1 ENSG00000252563.1 RNA5SP45 chr1 41466937 41467028 - rRNA KNOWN NA 92 92 1 ENSG00000249534.1 LINC01258 chr4 38420662 38523180 - lincRNA NOVEL OTTHUMG00000160414.2 102519 2059 8 ENSG00000249667.1 LINC01259 chr4 38509767 38518056 + lincRNA NOVEL OTTHUMG00000160486.1 8290 757 3 ENSG00000251635.1 RP11-213G21.2 chr4 38564003 38570671 + lincRNA NOVEL OTTHUMG00000160485.1 6669 500 3 ENSG00000231160.8 KLF3-AS1 chr4 38612701 38664883 - processed_transcript NOVEL OTTHUMG00000160386.5 52183 4830 36 ENSG00000271958.1 RP11-617D20.2 chr4 38618265 38619437 - lincRNA NOVEL OTTHUMG00000185314.1 1173 376 2 ENSG00000109787.11 KLF3 chr4 38664196 38701042 + protein_coding KNOWN OTTHUMG00000097821.3 36847 6297 12 ENSG00000222230.1 RNA5SP158 chr4 38758791 38758892 - rRNA KNOWN NA 102 102 1 ENSG00000174123.9 TLR10 chr4 38772239 38782990 - protein_coding KNOWN OTTHUMG00000128578.2 10752 4217 23 ENSG00000174125.6 TLR1 chr4 38790677 38856817 - protein_coding KNOWN OTTHUMG00000160413.4 66141 4535 32 ENSG00000174130.11 TLR6 chr4 38823715 38856817 - protein_coding KNOWN OTTHUMG00000128579.3 33103 6035 10 ENSG00000127129.8 EDN2 chr1 41478775 41484673 - protein_coding KNOWN OTTHUMG00000006362.1 5899 1639 25 ENSG00000281018.1 AC108044.1 chr4 38859306 38859445 + miRNA NOVEL NA 140 140 1 ENSG00000197712.10 FAM114A1 chr4 38867677 38945739 + protein_coding KNOWN OTTHUMG00000128583.3 78063 4871 42 ENSG00000207944.1 MIR574 chr4 38868032 38868127 + miRNA KNOWN NA 96 96 1 ENSG00000121895.7 TMEM156 chr4 38966744 39032922 - protein_coding KNOWN OTTHUMG00000128582.3 66179 2562 17 ENSG00000109790.15 KLHL5 chr4 39045039 39126857 + protein_coding KNOWN OTTHUMG00000097819.3 81819 5144 63 ENSG00000249207.1 RP11-360F5.1 chr4 39112677 39126818 - antisense NOVEL OTTHUMG00000160443.1 14142 946 4 ENSG00000249685.1 RP11-360F5.3 chr4 39133913 39135608 + lincRNA NOVEL OTTHUMG00000160465.1 1696 455 2 ENSG00000157796.16 WDR19 chr4 39182404 39285810 + protein_coding KNOWN OTTHUMG00000160466.3 103407 8873 178 ENSG00000035928.13 RFC1 chr4 39287456 39366375 - protein_coding KNOWN OTTHUMG00000099363.2 78920 6713 116 ENSG00000206675.1 RNU6-32P chr4 39297605 39297711 - snRNA KNOWN NA 107 107 1 ENSG00000127124.12 HIVEP3 chr1 41506365 42035925 - protein_coding KNOWN OTTHUMG00000006361.1 529561 14224 42 ENSG00000222592.1 RNU6-887P chr4 39399149 39399248 + snRNA KNOWN NA 100 100 1 ENSG00000134962.6 KLB chr4 39406853 39451536 + protein_coding KNOWN OTTHUMG00000128577.1 44684 6082 5 ENSG00000264621.1 MIR5591 chr4 39411910 39411974 + miRNA KNOWN NA 65 65 1 ENSG00000238797.1 Y_RNA chr4 39441665 39441764 + misc_RNA NOVEL NA 100 100 1 ENSG00000163682.14 RPL9 chr4 39454124 39458948 - protein_coding KNOWN OTTHUMG00000099367.2 4825 3259 64 ENSG00000121897.12 LIAS chr4 39459000 39477653 + protein_coding KNOWN OTTHUMG00000099369.3 18654 2464 52 ENSG00000224097.5 RP11-472B18.1 chr4 39480255 39481905 + transcribed_processed_pseudogene KNOWN OTTHUMG00000160539.2 1651 1651 4 ENSG00000109814.10 UGDH chr4 39498755 39528311 - protein_coding KNOWN OTTHUMG00000099371.4 29557 4045 76 ENSG00000249348.1 UGDH-AS1 chr4 39528019 39594707 + antisense NOVEL OTTHUMG00000160540.2 66689 2787 5 ENSG00000163683.10 SMIM14 chr4 39546330 39639090 - protein_coding KNOWN OTTHUMG00000128581.6 92761 6721 27 ENSG00000230881.1 RP11-486B10.3 chr1 41535443 41535868 + antisense NOVEL OTTHUMG00000006360.1 426 265 2 ENSG00000252796.1 RNU7-11P chr4 39621012 39621073 + snRNA KNOWN NA 62 62 1 ENSG00000255458.4 RP11-539G18.3 chr4 39639140 39666644 + lincRNA NOVEL OTTHUMG00000166290.4 27505 2301 16 ENSG00000078140.12 UBE2K chr4 39698044 39782792 + protein_coding KNOWN OTTHUMG00000160543.1 84749 5245 40 ENSG00000252975.1 Y_RNA chr4 39710085 39710176 - misc_RNA NOVEL NA 92 92 1 ENSG00000249019.2 RP11-539G18.1 chr4 39713842 39714451 - processed_pseudogene KNOWN OTTHUMG00000160544.2 610 287 2 ENSG00000243260.3 RN7SL558P chr4 39761000 39761298 + misc_RNA KNOWN NA 299 299 1 ENSG00000180610.10 ZBTB12P1 chr4 39770081 39771371 - processed_pseudogene KNOWN OTTHUMG00000160580.1 1291 1122 3 ENSG00000121892.13 PDS5A chr4 39822863 39977956 - protein_coding KNOWN OTTHUMG00000160582.2 155094 12204 77 ENSG00000271278.1 TCEB1P33 chr4 39932454 39933561 + processed_pseudogene KNOWN OTTHUMG00000184983.1 1108 632 3 ENSG00000252970.1 RNA5SP159 chr4 39936753 39936855 + rRNA KNOWN NA 103 103 1 ENSG00000280747.1 Metazoa_SRP chr1 1589065 1589350 - misc_RNA NOVEL NA 286 286 1 ENSG00000230638.4 RP11-486B10.4 chr1 41542069 41544310 + processed_pseudogene KNOWN OTTHUMG00000057519.2 2242 2242 1 ENSG00000275114.1 AC098591.1 chr4 39972741 39972797 - miRNA NOVEL NA 57 57 1 ENSG00000250568.1 RP11-333E13.2 chr4 39973128 39973442 - processed_pseudogene KNOWN OTTHUMG00000160581.1 315 315 1 ENSG00000231707.4 PABPC1P1 chr4 39973444 39974338 + processed_pseudogene KNOWN OTTHUMG00000160579.2 895 591 2 ENSG00000249064.1 KRT18P25 chr4 40020240 40021517 + processed_pseudogene KNOWN OTTHUMG00000160583.1 1278 1278 1 ENSG00000205794.4 RP11-333E13.4 chr4 40042917 40057199 - transcribed_processed_pseudogene KNOWN OTTHUMG00000160576.3 14283 1613 4 ENSG00000078177.12 N4BP2 chr4 40056826 40158252 + protein_coding KNOWN OTTHUMG00000128599.2 101427 9835 55 ENSG00000200455.1 RNU6-1112P chr4 40077884 40077982 + snRNA KNOWN NA 99 99 1 ENSG00000201863.1 SNORA51 chr4 40082983 40083106 + snoRNA NOVEL NA 124 124 1 ENSG00000248977.1 RP11-395I6.1 chr4 40142198 40142365 - processed_pseudogene KNOWN OTTHUMG00000160578.1 168 168 1 ENSG00000260296.1 RP11-395I6.3 chr4 40166675 40167831 + sense_overlapping NOVEL OTTHUMG00000176303.1 1157 1157 1 ENSG00000264896.1 AL451006.1 chr1 41759141 41759227 + miRNA NOVEL NA 87 87 1 ENSG00000168421.11 RHOH chr4 40191053 40246967 + protein_coding KNOWN OTTHUMG00000099373.3 55915 6608 85 ENSG00000250338.1 RP11-395I6.2 chr4 40265472 40266457 + lincRNA NOVEL OTTHUMG00000160577.1 986 553 2 ENSG00000249241.1 AC195454.1 chr4 40316485 40330419 + lincRNA NOVEL OTTHUMG00000160407.1 13935 957 3 ENSG00000174343.5 CHRNA9 chr4 40335329 40355217 + protein_coding KNOWN OTTHUMG00000099375.2 19889 3168 10 ENSG00000239010.1 RNU7-74P chr4 40377452 40377513 - snRNA KNOWN NA 62 62 1 ENSG00000163694.13 RBM47 chr4 40423267 40630875 - protein_coding KNOWN OTTHUMG00000128598.3 207609 8544 66 ENSG00000250893.1 RP11-588L15.2 chr4 40426119 40427585 + antisense NOVEL OTTHUMG00000160753.1 1467 862 2 ENSG00000275251.1 AC098869.1 chr4 40463711 40463803 + miRNA NOVEL NA 93 93 1 ENSG00000242197.2 RP11-588L15.1 chr4 40491733 40492024 + processed_pseudogene KNOWN OTTHUMG00000157452.2 292 292 1 ENSG00000263642.1 MIR4802 chr4 40502040 40502119 - miRNA KNOWN NA 80 80 1 ENSG00000227538.1 HNRNPFP1 chr1 42040597 42041729 + processed_pseudogene KNOWN OTTHUMG00000006363.1 1133 1133 1 ENSG00000179299.15 NSUN7 chr4 40749897 40809985 + protein_coding KNOWN OTTHUMG00000128597.4 60089 4728 45 ENSG00000248780.1 RP11-632F7.1 chr4 40786110 40786710 + processed_pseudogene KNOWN OTTHUMG00000160406.1 601 601 1 ENSG00000163697.15 APBB2 chr4 40810027 41216714 - protein_coding KNOWN OTTHUMG00000160416.9 406688 12956 212 ENSG00000250906.1 RP11-632F7.3 chr4 40812779 40826151 + antisense NOVEL OTTHUMG00000160739.1 13373 477 2 ENSG00000207195.1 Y_RNA chr4 40826655 40826765 - misc_RNA NOVEL NA 111 111 1 ENSG00000201736.1 RNA5SP160 chr4 40990154 40990273 + rRNA KNOWN NA 120 120 1 ENSG00000199790.1 RNU6-836P chr4 41084607 41084713 + snRNA KNOWN NA 107 107 1 ENSG00000207198.1 RNU6-1195P chr4 41113942 41114045 + snRNA KNOWN NA 104 104 1 ENSG00000251173.1 UCHL1-AS1 chr4 41220074 41256727 - antisense NOVEL OTTHUMG00000160405.3 36654 880 5 ENSG00000154277.11 UCHL1 chr4 41256413 41268455 + protein_coding KNOWN OTTHUMG00000099377.15 12043 2282 89 ENSG00000228776.2 RP11-319C21.1 chr1 42140635 42141391 + processed_pseudogene KNOWN OTTHUMG00000007025.2 757 454 2 ENSG00000207481.1 Y_RNA chr4 41303237 41303337 - misc_RNA NOVEL NA 101 101 1 ENSG00000064042.16 LIMCH1 chr4 41359607 41700044 + protein_coding KNOWN OTTHUMG00000160575.6 340438 10862 359 ENSG00000239627.3 RP11-124A7.1 chr4 41389115 41389593 + processed_pseudogene KNOWN OTTHUMG00000157453.3 479 479 1 ENSG00000249216.1 RP11-227F19.5 chr4 41688858 41692797 - antisense NOVEL OTTHUMG00000160625.1 3940 435 3 ENSG00000249081.1 OR5M14P chr4 41722538 41723512 - unprocessed_pseudogene KNOWN OTTHUMG00000160534.1 975 618 2 ENSG00000109132.6 PHOX2B chr4 41744082 41748970 - protein_coding KNOWN OTTHUMG00000099379.3 4889 3092 6 ENSG00000250467.1 RP11-227F19.1 chr4 41748293 41824119 + antisense NOVEL OTTHUMG00000160532.1 75827 907 5 ENSG00000249122.1 RP11-227F19.2 chr4 41750345 41757341 + lincRNA NOVEL OTTHUMG00000160525.1 6997 561 3 ENSG00000200338.1 RNU1-49P chr4 41771945 41772103 - snRNA KNOWN NA 159 159 1 ENSG00000281235.1 AC105389.1 chr4 41794665 41794773 - miRNA NOVEL NA 109 109 1 ENSG00000044012.3 GUCA2B chr1 42153421 42155824 + protein_coding KNOWN OTTHUMG00000007024.1 2404 597 3 ENSG00000249745.1 HMGB1P28 chr4 41842154 41843950 - unprocessed_pseudogene KNOWN OTTHUMG00000160533.1 1797 552 3 ENSG00000245870.2 LINC00682 chr4 41876481 41882611 - lincRNA NOVEL OTTHUMG00000160528.2 6131 2283 6 ENSG00000249771.1 RP11-457P14.5 chr4 41883060 41894579 - lincRNA NOVEL OTTHUMG00000160529.1 11520 825 3 ENSG00000249887.1 RP11-457P14.6 chr4 41924180 41924380 + processed_pseudogene KNOWN OTTHUMG00000160536.1 201 201 1 ENSG00000109133.11 TMEM33 chr4 41935120 41960572 + protein_coding KNOWN OTTHUMG00000099381.4 25453 8240 51 ENSG00000182308.6 DCAF4L1 chr4 41981696 41986467 + protein_coding KNOWN OTTHUMG00000160527.1 4772 4772 1 ENSG00000272862.1 RP11-814H16.2 chr4 41988741 41989237 - lincRNA NOVEL OTTHUMG00000186264.1 497 497 1 ENSG00000014824.12 SLC30A9 chr4 41990472 42090457 + protein_coding KNOWN OTTHUMG00000099387.4 99986 7225 52 ENSG00000249212.1 ATP1B1P1 chr4 42029209 42030123 + unprocessed_pseudogene KNOWN OTTHUMG00000160530.1 915 915 1 ENSG00000188848.14 BEND4 chr4 42110938 42152878 - protein_coding KNOWN OTTHUMG00000160531.4 41941 8765 18 ENSG00000197273.3 GUCA2A chr1 42162691 42164718 - protein_coding KNOWN OTTHUMG00000007023.1 2028 569 3 ENSG00000250781.1 RP11-63A11.1 chr4 42281830 42391268 - antisense NOVEL OTTHUMG00000161041.1 109439 1326 7 ENSG00000178343.4 SHISA3 chr4 42397839 42402487 + protein_coding KNOWN OTTHUMG00000161043.1 4649 1971 2 ENSG00000124406.15 ATP8A1 chr4 42408373 42657105 - protein_coding KNOWN OTTHUMG00000099403.3 248733 11199 114 ENSG00000266058.1 AC084010.1 chr4 42445990 42446072 + miRNA NOVEL NA 83 83 1 ENSG00000240167.1 RPS7P7 chr4 42471810 42472380 + processed_pseudogene KNOWN OTTHUMG00000157459.1 571 571 1 ENSG00000248283.2 CCNL2P1 chr4 42561457 42562425 - processed_pseudogene KNOWN OTTHUMG00000162545.2 969 969 1 ENSG00000260519.1 RP11-109E24.2 chr4 42657496 42657928 + antisense NOVEL OTTHUMG00000176274.1 433 433 1 ENSG00000251517.1 RP11-109E24.1 chr4 42706107 42707335 + lincRNA NOVEL OTTHUMG00000161042.1 1229 1128 2 ENSG00000252595.1 RN7SKP82 chr4 42892396 42892618 + misc_RNA KNOWN NA 223 223 1 ENSG00000215203.2 GRXCR1 chr4 42893267 43030658 + protein_coding KNOWN OTTHUMG00000160434.1 137392 991 4 ENSG00000198815.7 FOXJ3 chr1 42176539 42335877 - protein_coding KNOWN OTTHUMG00000007026.2 159339 6893 82 ENSG00000248939.1 RP11-395F4.1 chr4 43133867 43234956 + lincRNA NOVEL OTTHUMG00000160432.1 101090 606 5 ENSG00000250657.1 RP11-1E6.1 chr4 43340875 43345600 + processed_transcript NOVEL OTTHUMG00000160433.2 4726 681 7 ENSG00000277096.1 RP11-324J13.3 chr4 43388157 43388437 + processed_pseudogene KNOWN OTTHUMG00000187576.1 281 281 1 ENSG00000213851.3 RP11-324J13.1 chr4 43410041 43410937 - processed_pseudogene KNOWN OTTHUMG00000157460.1 897 897 1 ENSG00000248143.1 RP11-324J13.2 chr4 43457527 43492543 - lincRNA NOVEL OTTHUMG00000160455.1 35017 582 3 ENSG00000251501.1 RP11-466J24.1 chr4 43586328 43588097 + processed_pseudogene KNOWN OTTHUMG00000160445.1 1770 1770 1 ENSG00000239464.3 RN7SL691P chr4 43598544 43598844 - misc_RNA KNOWN NA 301 301 1 ENSG00000239679.3 RN7SL193P chr4 43863274 43863549 + misc_RNA KNOWN NA 276 276 1 ENSG00000124399.4 RP11-663P9.2 chr4 43898962 43899351 + processed_pseudogene KNOWN OTTHUMG00000160452.1 390 390 1 ENSG00000250863.1 RP11-663P9.1 chr4 43980006 43981620 - lincRNA NOVEL OTTHUMG00000160444.1 1615 449 2 ENSG00000227527.2 RP11-223A3.1 chr1 42335386 42338376 - sense_overlapping NOVEL OTTHUMG00000007027.2 2991 661 2 ENSG00000251350.1 RP11-328N19.1 chr4 44016861 44022063 + lincRNA NOVEL OTTHUMG00000160456.2 5203 2823 4 ENSG00000183783.6 KCTD8 chr4 44173909 44448807 - protein_coding KNOWN OTTHUMG00000099409.2 274899 2704 6 ENSG00000281514.1 Metazoa_SRP chr4 44299628 44299915 - misc_RNA NOVEL NA 288 288 1 ENSG00000266496.1 AC131951.1 chr4 44448005 44448110 + miRNA NOVEL NA 106 106 1 ENSG00000251159.1 RP11-500G9.1 chr4 44533615 44533880 + processed_pseudogene KNOWN OTTHUMG00000160573.1 266 266 1 ENSG00000177752.13 YIPF7 chr4 44622065 44678556 - protein_coding KNOWN OTTHUMG00000160467.6 56492 1813 22 ENSG00000151806.12 GUF1 chr4 44678427 44700926 + protein_coding KNOWN OTTHUMG00000128608.10 22500 4454 45 ENSG00000163281.10 GNPDA2 chr4 44682200 44726595 - protein_coding KNOWN OTTHUMG00000099415.6 44396 7150 33 ENSG00000273369.1 RP11-700J17.1 chr4 44693946 44694386 - antisense NOVEL OTTHUMG00000186267.1 441 441 1 ENSG00000272936.1 RP11-700J17.2 chr4 44704405 44704965 + antisense NOVEL OTTHUMG00000186268.1 561 561 1 ENSG00000177181.13 RIMKLA chr1 42380795 42422578 + protein_coding KNOWN OTTHUMG00000007335.3 41784 8981 10 ENSG00000249729.2 RP11-55C6.1 chr4 44840380 44841402 - processed_pseudogene KNOWN OTTHUMG00000162176.2 1023 1023 1 ENSG00000248987.2 PRDX4P1 chr4 44944015 44944961 - processed_pseudogene KNOWN OTTHUMG00000162177.2 947 574 2 ENSG00000275959.1 RP11-362I1.2 chr4 44994426 44996022 + processed_pseudogene KNOWN OTTHUMG00000187577.1 1597 1597 1 ENSG00000248744.1 RP11-362I1.1 chr4 45009540 45051652 + lincRNA NOVEL OTTHUMG00000160568.2 42113 672 6 ENSG00000248320.1 PRKRIRP9 chr4 45323253 45326028 - processed_pseudogene KNOWN OTTHUMG00000160567.3 2776 2360 2 ENSG00000224560.3 RP11-270L13.1 chr4 45414337 45414910 - processed_pseudogene KNOWN OTTHUMG00000160566.2 574 574 1 ENSG00000200720.1 RNU6-931P chr4 45480030 45480136 + snRNA KNOWN NA 107 107 1 ENSG00000222257.1 RN7SKP199 chr4 45995119 45995423 + misc_RNA KNOWN NA 305 305 1 ENSG00000163285.7 GABRG1 chr4 46035769 46124081 - protein_coding KNOWN OTTHUMG00000128609.1 88313 6785 9 ENSG00000260878.1 RP11-320H14.1 chr4 46243548 46244215 - sense_overlapping NOVEL OTTHUMG00000176306.1 668 668 1 ENSG00000235002.1 RP11-157D18.2 chr1 42412398 42412794 - processed_pseudogene KNOWN OTTHUMG00000007336.1 397 397 1 ENSG00000151834.14 GABRA2 chr4 46248427 46475230 - protein_coding KNOWN OTTHUMG00000044266.7 226804 11930 118 ENSG00000249330.1 RP11-436F23.1 chr4 46390255 46433188 + antisense NOVEL OTTHUMG00000160519.1 42934 549 3 ENSG00000252243.1 RNU6-412P chr4 46531237 46531342 - snRNA KNOWN NA 106 106 1 ENSG00000249936.3 RAC1P2 chr4 46723830 46724408 - processed_pseudogene KNOWN OTTHUMG00000160545.1 579 579 1 ENSG00000170516.15 COX7B2 chr4 46734827 46909235 - protein_coding KNOWN OTTHUMG00000099423.3 174409 807 14 ENSG00000109158.9 GABRA4 chr4 46918900 46994407 - protein_coding KNOWN OTTHUMG00000099431.5 75508 12131 34 ENSG00000163288.12 GABRB1 chr4 46993723 47426444 + protein_coding KNOWN OTTHUMG00000044269.5 432722 3140 25 ENSG00000260918.1 RP11-731J8.2 chr4 47431960 47438959 + sense_overlapping NOVEL OTTHUMG00000175912.2 7000 7000 1 ENSG00000169019.10 COMMD8 chr4 47450796 47463719 - protein_coding KNOWN OTTHUMG00000099435.3 12924 1766 7 ENSG00000145246.12 ATP10D chr4 47485288 47593486 + protein_coding KNOWN OTTHUMG00000160784.3 108199 7965 63 ENSG00000228594.3 C1orf233 chr1 1598012 1600096 - protein_coding KNOWN OTTHUMG00000154864.2 2085 2085 1 ENSG00000066185.11 ZMYND12 chr1 42430329 42456267 - protein_coding KNOWN OTTHUMG00000007333.2 25939 2195 20 ENSG00000242431.2 RP11-731J8.1 chr4 47490967 47491471 - processed_pseudogene KNOWN OTTHUMG00000157464.2 505 505 1 ENSG00000248254.1 AC092597.3 chr4 47556731 47560259 - antisense NOVEL OTTHUMG00000099437.6 3529 601 3 ENSG00000145244.10 CORIN chr4 47593998 47838106 - protein_coding KNOWN OTTHUMG00000099441.2 244109 10087 147 ENSG00000277388.1 MIR8053 chr4 47652669 47652743 + miRNA KNOWN NA 75 75 1 ENSG00000242262.1 RP11-100N21.1 chr4 47706372 47706987 + processed_pseudogene KNOWN OTTHUMG00000157465.1 616 616 1 ENSG00000259959.1 RP11-121C2.2 chr4 47840122 47844339 - lincRNA NOVEL OTTHUMG00000176325.1 4218 4218 1 ENSG00000170448.10 NFXL1 chr4 47847233 47914667 - protein_coding KNOWN OTTHUMG00000128621.4 67435 4484 131 ENSG00000163293.10 NIPAL1 chr4 47914142 48040173 + protein_coding KNOWN OTTHUMG00000128622.10 126032 5983 25 ENSG00000198515.12 CNGA1 chr4 47935977 48016672 - protein_coding KNOWN OTTHUMG00000160668.10 80696 3581 70 ENSG00000221764.1 AC107068.1 chr4 47976216 47976327 + miRNA NOVEL NA 112 112 1 ENSG00000127125.8 PPCS chr1 42456117 42473385 + protein_coding KNOWN OTTHUMG00000007332.4 17269 2590 20 ENSG00000074966.9 TXK chr4 48066393 48134256 - protein_coding KNOWN OTTHUMG00000102065.7 67864 3472 40 ENSG00000200269.1 RNU6-838P chr4 48106081 48106188 - snRNA KNOWN NA 108 108 1 ENSG00000135605.11 TEC chr4 48135783 48269864 - protein_coding KNOWN OTTHUMG00000128623.8 134082 4030 49 ENSG00000202014.1 Y_RNA chr4 48153434 48153535 + misc_RNA NOVEL NA 102 102 1 ENSG00000109171.13 SLAIN2 chr4 48341322 48426212 + protein_coding KNOWN OTTHUMG00000161701.8 84891 6524 27 ENSG00000145248.6 SLC10A4 chr4 48483343 48489196 + protein_coding KNOWN OTTHUMG00000102092.4 5854 1790 3 ENSG00000182223.7 ZAR1 chr4 48490252 48494389 + protein_coding KNOWN OTTHUMG00000102093.6 4138 1460 4 ENSG00000075539.12 FRYL chr4 48497361 48780322 - protein_coding KNOWN OTTHUMG00000160608.13 282962 18152 296 ENSG00000251722.1 RNU5E-3P chr4 48574453 48574520 - snRNA KNOWN NA 68 68 1 ENSG00000109180.13 OCIAD1 chr4 48805212 48861817 + protein_coding KNOWN OTTHUMG00000102095.18 56606 4714 183 ENSG00000186409.13 CCDC30 chr1 42463330 42654664 + protein_coding KNOWN OTTHUMG00000007334.8 191335 13504 141 ENSG00000248256.1 OCIAD1-AS1 chr4 48852008 48860203 - antisense NOVEL OTTHUMG00000163197.1 8196 265 2 ENSG00000145247.10 OCIAD2 chr4 48885019 48906937 - protein_coding KNOWN OTTHUMG00000128626.34 21919 2483 52 ENSG00000252913.1 RNU6-158P chr4 48932755 48932854 - snRNA KNOWN NA 100 100 1 ENSG00000251334.2 RP11-317G22.2 chr4 48936582 48936880 + processed_pseudogene KNOWN OTTHUMG00000163194.2 299 299 1 ENSG00000109182.10 CWH43 chr4 48986247 49062081 + protein_coding KNOWN OTTHUMG00000128627.6 75835 3138 51 ENSG00000225455.3 TPI1P4 chr4 49016682 49017154 - processed_pseudogene KNOWN OTTHUMG00000160137.2 473 473 1 ENSG00000222437.1 AC118282.3 chr4 49197203 49197284 + miRNA NOVEL NA 82 82 1 ENSG00000221747.1 AC118282.2 chr4 49198015 49198097 + miRNA NOVEL NA 83 83 1 ENSG00000221415.1 AC118282.1 chr4 49198207 49198289 + miRNA NOVEL NA 83 83 1 ENSG00000249828.2 RP11-1281K21.2 chr4 49203171 49203726 - processed_pseudogene KNOWN OTTHUMG00000163193.2 556 556 1 ENSG00000230116.1 RP11-163G10.2 chr1 42491739 42492493 + processed_pseudogene KNOWN OTTHUMG00000007432.1 755 755 1 ENSG00000281200.1 AC118282.4 chr4 49209372 49209448 + miRNA NOVEL NA 77 77 1 ENSG00000249079.1 RP11-1281K21.3 chr4 49212251 49212624 - processed_pseudogene KNOWN OTTHUMG00000163196.1 374 374 1 ENSG00000280043.1 RP11-1281K21.8 chr4 49229573 49231284 + TEC KNOWN OTTHUMG00000176309.1 1712 1712 1 ENSG00000250016.2 SNX18P23 chr4 49233289 49233965 - processed_pseudogene KNOWN OTTHUMG00000163198.2 677 677 1 ENSG00000237961.4 RP11-1281K21.1 chr4 49238032 49245419 - processed_pseudogene KNOWN OTTHUMG00000160609.2 7388 765 4 ENSG00000268736.1 RP11-1281K21.6 chr4 49246021 49246538 + processed_pseudogene KNOWN OTTHUMG00000163199.2 518 518 1 ENSG00000248946.2 RP11-1281K21.7 chr4 49246601 49246915 + processed_pseudogene KNOWN OTTHUMG00000163192.2 315 243 2 ENSG00000248583.1 RP11-241F15.1 chr4 49486926 49489554 - unprocessed_pseudogene KNOWN OTTHUMG00000160594.1 2629 670 3 ENSG00000251056.1 ANKRD20A17P chr4 49502145 49506022 - unprocessed_pseudogene KNOWN OTTHUMG00000160600.1 3878 1330 3 ENSG00000250769.2 RP11-241F15.3 chr4 49507764 49508806 - processed_pseudogene KNOWN OTTHUMG00000160597.2 1043 770 3 ENSG00000236876.3 TMSB4XP1 chr1 42500205 42500339 - processed_pseudogene KNOWN OTTHUMG00000007433.1 135 135 1 ENSG00000248532.2 RP11-241F15.5 chr4 49523648 49523857 - processed_pseudogene KNOWN OTTHUMG00000160592.2 210 210 1 ENSG00000269848.1 RP11-1281K21.9 chr4 49524030 49524185 - processed_pseudogene KNOWN OTTHUMG00000182824.1 156 156 1 ENSG00000268967.1 RP11-1281K21.10 chr4 49548564 49548855 - processed_pseudogene KNOWN OTTHUMG00000182825.1 292 245 2 ENSG00000268391.1 RP11-241F15.6 chr4 49548918 49549435 - processed_pseudogene KNOWN OTTHUMG00000160595.2 518 518 1 ENSG00000232471.3 RP11-241F15.7 chr4 49550032 49557400 + unprocessed_pseudogene KNOWN OTTHUMG00000160599.1 7369 765 4 ENSG00000251630.1 RP11-241F15.9 chr4 49561285 49561470 - processed_pseudogene KNOWN OTTHUMG00000160596.1 186 186 1 ENSG00000251539.1 SNX18P24 chr4 49561479 49562149 + processed_pseudogene KNOWN OTTHUMG00000160598.1 671 671 1 ENSG00000250753.2 RP11-241F15.10 chr4 49579833 49580189 + processed_pseudogene KNOWN OTTHUMG00000160590.2 357 357 1 ENSG00000280630.1 AC119751.5 chr4 49583025 49583101 - miRNA NOVEL NA 77 77 1 ENSG00000249337.2 SNX18P25 chr4 49588772 49589529 + processed_pseudogene KNOWN OTTHUMG00000160593.2 758 758 1 ENSG00000200254.1 RNU6-536P chr1 42569033 42569139 + snRNA KNOWN NA 107 107 1 ENSG00000221075.1 AC119751.1 chr4 49595610 49595692 - miRNA NOVEL NA 83 83 1 ENSG00000221334.1 AC119751.3 chr4 49598423 49598505 - miRNA NOVEL NA 83 83 1 ENSG00000221082.1 AC119751.2 chr4 49598615 49598697 - miRNA NOVEL NA 83 83 1 ENSG00000223099.1 AC119751.4 chr4 49599428 49599509 - miRNA NOVEL NA 82 82 1 ENSG00000109184.13 DCUN1D4 chr4 51843000 51916837 + protein_coding KNOWN OTTHUMG00000128700.7 73838 7625 149 ENSG00000250473.1 DUTP7 chr4 51865050 51865535 - processed_pseudogene KNOWN OTTHUMG00000160621.1 486 486 1 ENSG00000272576.1 RP11-365H22.2 chr4 51918772 51919381 + lincRNA NOVEL OTTHUMG00000186275.1 610 610 1 ENSG00000243929.1 RP11-61F5.1 chr4 51978079 51978372 - processed_pseudogene KNOWN OTTHUMG00000157468.1 294 294 1 ENSG00000188993.3 LRRC66 chr4 51993702 52017620 - protein_coding KNOWN OTTHUMG00000160623.1 23919 3327 4 ENSG00000163069.11 SGCB chr4 52020706 52038482 - protein_coding KNOWN OTTHUMG00000128697.2 17777 4541 15 ENSG00000236180.2 RP11-163G10.4 chr1 42570970 42571390 + processed_pseudogene KNOWN OTTHUMG00000007521.2 421 421 1 ENSG00000251040.1 RP11-535C7.1 chr4 52044805 52046954 + lincRNA NOVEL OTTHUMG00000160622.1 2150 612 3 ENSG00000163071.9 SPATA18 chr4 52051331 52097292 + protein_coding KNOWN OTTHUMG00000128698.2 45962 4941 64 ENSG00000251286.2 RP11-588F10.1 chr4 52440494 52441535 - processed_pseudogene KNOWN OTTHUMG00000160638.2 1042 1042 1 ENSG00000199924.1 RNU6-1252P chr4 52494849 52494952 + snRNA KNOWN NA 104 104 1 ENSG00000109189.11 USP46 chr4 52590972 52659335 - protein_coding KNOWN OTTHUMG00000160640.3 68364 8917 61 ENSG00000248866.1 USP46-AS1 chr4 52659406 52661668 + lincRNA NOVEL OTTHUMG00000160639.1 2263 1048 2 ENSG00000260120.1 RP11-177B4.2 chr4 52680609 52692649 + lincRNA NOVEL OTTHUMG00000176307.1 12041 1741 3 ENSG00000226950.5 DANCR chr4 52712404 52720351 + processed_transcript KNOWN OTTHUMG00000154670.3 7948 2285 13 ENSG00000264585.1 MIR4449 chr4 52712682 52712747 + miRNA KNOWN NA 66 66 1 ENSG00000212588.1 SNORA26 chr4 52713249 52713370 + snoRNA KNOWN NA 122 122 1 ENSG00000171960.9 PPIH chr1 42658425 42676758 + protein_coding KNOWN OTTHUMG00000007520.5 18334 1444 38 ENSG00000248375.1 RP11-177B4.1 chr4 52720081 52720831 - processed_pseudogene KNOWN OTTHUMG00000160637.1 751 751 1 ENSG00000226887.6 ERVMER34-1 chr4 52722618 52751640 - protein_coding KNOWN OTTHUMG00000150366.3 29023 4077 10 ENSG00000212490.1 SNORA26 chr4 52748137 52748259 + snoRNA NOVEL NA 123 123 1 ENSG00000266656.1 AC104066.1 chr4 52751147 52751212 - miRNA NOVEL NA 66 66 1 ENSG00000199901.1 Y_RNA chr4 52786537 52786638 + misc_RNA NOVEL NA 102 102 1 ENSG00000250302.1 RP11-752D24.3 chr4 52789994 52815464 + lincRNA NOVEL OTTHUMG00000160696.2 25471 727 5 ENSG00000128045.6 RASL11B chr4 52862290 52866835 + protein_coding KNOWN OTTHUMG00000102097.4 4546 2472 9 ENSG00000184178.14 SCFD2 chr4 52872982 53366075 - protein_coding KNOWN OTTHUMG00000160588.4 493094 3185 25 ENSG00000248115.1 RP11-752D24.2 chr4 52945649 52958087 + antisense NOVEL OTTHUMG00000160692.1 12439 4840 8 ENSG00000207385.1 RNU6-310P chr4 53265461 53265567 - snRNA KNOWN NA 107 107 1 ENSG00000234917.2 RP5-994D16.3 chr1 42678735 42681659 + lincRNA NOVEL OTTHUMG00000007522.2 2925 601 2 ENSG00000145216.14 FIP1L1 chr4 53377643 54295272 + protein_coding KNOWN OTTHUMG00000128701.3 917630 7169 159 ENSG00000072201.12 LNX1 chr4 53459301 53701405 - protein_coding KNOWN OTTHUMG00000102099.2 242105 5725 47 ENSG00000250930.4 LNX1-AS1 chr4 53496400 53549578 + antisense NOVEL OTTHUMG00000160644.1 53179 1381 12 ENSG00000173966.7 RP11-18M17.1 chr4 53575713 53576387 + processed_pseudogene KNOWN OTTHUMG00000160649.1 675 675 1 ENSG00000248494.1 LNX1-AS2 chr4 53592956 53604047 + sense_intronic NOVEL OTTHUMG00000160646.1 11092 887 4 ENSG00000274537.1 AC095040.1 chr4 53611608 53611689 + miRNA NOVEL NA 82 82 1 ENSG00000249341.1 RP11-317M11.1 chr4 53659208 53737156 + sense_intronic NOVEL OTTHUMG00000160650.1 77949 3095 7 ENSG00000249706.1 RP11-89B16.1 chr4 53899871 53916835 + sense_intronic NOVEL OTTHUMG00000160643.1 16965 835 3 ENSG00000250815.1 RP11-89B16.2 chr4 53927499 53928138 - processed_pseudogene KNOWN OTTHUMG00000160641.1 640 640 1 ENSG00000229585.4 RPL21P44 chr4 53986587 53987058 - processed_pseudogene KNOWN OTTHUMG00000157449.3 472 472 1 ENSG00000065978.16 YBX1 chr1 42682427 42702349 + protein_coding KNOWN OTTHUMG00000007523.6 19923 1930 41 ENSG00000272650.1 RP11-571I18.4 chr4 53997415 53997712 - lincRNA NOVEL OTTHUMG00000186276.1 298 298 1 ENSG00000109220.9 CHIC2 chr4 54009789 54064690 - protein_coding KNOWN OTTHUMG00000102101.2 54902 1318 20 ENSG00000269506.2 RP11-571I18.5 chr4 54059597 54061210 + antisense NOVEL OTTHUMG00000187187.1 1614 1614 1 ENSG00000251105.1 RP11-571I18.2 chr4 54076625 54076848 + processed_pseudogene KNOWN OTTHUMG00000160647.1 224 224 1 ENSG00000250147.1 MORF4L2P1 chr4 54086926 54087783 + processed_pseudogene KNOWN OTTHUMG00000160642.1 858 858 1 ENSG00000180613.9 GSX2 chr4 54099523 54102505 + protein_coding KNOWN OTTHUMG00000128696.3 2983 1926 10 ENSG00000242670.1 RP11-601I15.1 chr4 54221126 54221472 + processed_pseudogene KNOWN OTTHUMG00000157470.1 347 347 1 ENSG00000134853.10 PDGFRA chr4 54229097 54298247 + protein_coding KNOWN OTTHUMG00000128699.4 69151 9732 84 ENSG00000278059.1 AC098587.1 chr4 54273705 54273772 + miRNA NOVEL NA 68 68 1 ENSG00000248184.1 RP11-231C18.1 chr4 54332892 54355954 + lincRNA NOVEL OTTHUMG00000160645.1 23063 474 2 ENSG00000272106.1 RP11-345P4.9 chr1 1613758 1615795 - antisense NOVEL OTTHUMG00000185588.1 2038 2038 1 ENSG00000164007.9 CLDN19 chr1 42733093 42740254 - protein_coding KNOWN OTTHUMG00000007524.1 7162 3602 12 ENSG00000248518.1 RP11-231C18.2 chr4 54376002 54376752 + lincRNA NOVEL OTTHUMG00000160648.1 751 540 2 ENSG00000251264.1 RP11-545H22.1 chr4 54440502 54446723 - lincRNA NOVEL OTTHUMG00000160611.1 6222 624 4 ENSG00000250456.1 AC006552.1 chr4 54603211 54607131 - lincRNA NOVEL OTTHUMG00000161130.1 3921 2216 2 ENSG00000157404.14 KIT chr4 54657918 54740715 + protein_coding KNOWN OTTHUMG00000128713.3 82798 5563 48 ENSG00000249727.1 RP11-273B19.2 chr4 54836161 54845402 - lincRNA NOVEL OTTHUMG00000160615.1 9242 732 2 ENSG00000251256.1 RP11-273B19.1 chr4 54845568 54859241 + lincRNA NOVEL OTTHUMG00000160614.1 13674 465 2 ENSG00000248317.1 RP11-463H12.2 chr4 54943630 54956818 + lincRNA NOVEL OTTHUMG00000160654.2 13189 422 3 ENSG00000244422.3 RPL38P3 chr4 54976159 54976371 - processed_pseudogene KNOWN OTTHUMG00000157473.3 213 213 1 ENSG00000264332.1 AC111194.1 chr4 55010833 55010932 - miRNA NOVEL NA 100 100 1 ENSG00000252815.1 RNU6-410P chr4 55031965 55032071 - snRNA KNOWN NA 107 107 1 ENSG00000117385.14 P3H1 chr1 42746335 42767084 - protein_coding KNOWN OTTHUMG00000007525.6 20750 6766 107 ENSG00000250646.1 RP11-530I17.1 chr4 55053060 55092534 + antisense NOVEL OTTHUMG00000160651.2 39475 455 4 ENSG00000244034.3 RN7SL424P chr4 55063738 55064026 + misc_RNA KNOWN NA 289 289 1 ENSG00000128052.8 KDR chr4 55078477 55125589 - protein_coding KNOWN OTTHUMG00000128734.2 47113 6259 46 ENSG00000239545.3 RN7SL822P chr4 55215624 55215919 - misc_RNA KNOWN NA 296 296 1 ENSG00000250812.2 RP11-530I17.2 chr4 55219344 55219973 + processed_pseudogene KNOWN OTTHUMG00000160656.2 630 630 1 ENSG00000206839.1 RNU6-746P chr4 55294490 55294598 + snRNA KNOWN NA 109 109 1 ENSG00000250464.1 LRRC34P2 chr4 55313011 55313924 - processed_pseudogene KNOWN OTTHUMG00000160652.2 914 553 2 ENSG00000128039.9 SRD5A3 chr4 55346109 55373096 + protein_coding KNOWN OTTHUMG00000128733.2 26988 4420 12 ENSG00000251111.2 FCF1P8 chr4 55351812 55352408 - processed_pseudogene KNOWN OTTHUMG00000160653.2 597 597 1 ENSG00000249700.7 SRD5A3-AS1 chr4 55363971 55395847 - processed_transcript NOVEL OTTHUMG00000160655.8 31877 5148 133 ENSG00000164008.12 C1orf50 chr1 42767269 42794493 + protein_coding KNOWN OTTHUMG00000007568.6 27225 2105 22 ENSG00000273257.1 RP11-177J6.1 chr4 55387949 55388271 + lincRNA NOVEL OTTHUMG00000186277.1 323 323 1 ENSG00000134851.11 TMEM165 chr4 55395957 55453397 + protein_coding KNOWN OTTHUMG00000128735.6 57441 7045 44 ENSG00000239040.1 Y_RNA chr4 55412636 55412738 + misc_RNA NOVEL NA 103 103 1 ENSG00000134852.13 CLOCK chr4 55427903 55547138 - protein_coding KNOWN OTTHUMG00000102141.6 119236 11762 116 ENSG00000238585.1 Y_RNA chr4 55501595 55501708 - misc_RNA NOVEL NA 114 114 1 ENSG00000223305.1 RN7SKP30 chr4 55540502 55540835 - misc_RNA KNOWN NA 334 334 1 ENSG00000272969.1 RP11-528I4.2 chr4 55547112 55547889 + antisense NOVEL OTTHUMG00000186305.1 778 778 1 ENSG00000163440.9 PDCL2 chr4 55556525 55592212 - protein_coding KNOWN OTTHUMG00000160674.1 35688 861 13 ENSG00000109255.10 NMU chr4 55595229 55636698 - protein_coding KNOWN OTTHUMG00000102161.4 41470 975 51 ENSG00000251923.1 RNU6-276P chr4 55798636 55798731 + snRNA KNOWN NA 96 96 1 ENSG00000228452.1 RP5-994D16.9 chr1 42775813 42776790 - antisense NOVEL OTTHUMG00000007569.1 978 484 2 ENSG00000250821.1 RP11-345F18.1 chr4 55820003 55837382 + lincRNA NOVEL OTTHUMG00000160694.1 17380 554 3 ENSG00000090989.16 EXOC1 chr4 55853616 55905034 + protein_coding KNOWN OTTHUMG00000102165.4 51419 5347 83 ENSG00000202358.1 RNU6-652P chr4 55885595 55885701 + snRNA KNOWN NA 107 107 1 ENSG00000222954.1 AC110611.1 chr4 55929982 55930073 + miRNA NOVEL NA 92 92 1 ENSG00000174799.9 CEP135 chr4 55948871 56033363 + protein_coding KNOWN OTTHUMG00000160748.2 84493 8640 58 ENSG00000109265.11 KIAA1211 chr4 56049073 56328625 + protein_coding KNOWN OTTHUMG00000160749.4 279553 6323 46 ENSG00000200741.1 RNA5SP161 chr4 56097390 56097504 + rRNA KNOWN NA 115 115 1 ENSG00000280464.1 AC092627.1 chr4 56097422 56097481 + miRNA NOVEL NA 60 60 1 ENSG00000252489.1 RNU6-197P chr4 56288485 56288584 - snRNA KNOWN NA 100 100 1 ENSG00000250324.2 MRPL22P1 chr4 56320719 56321334 - processed_pseudogene KNOWN OTTHUMG00000160812.2 616 616 1 ENSG00000274386.3 RP5-994D16.11 chr1 42787990 42798230 + lincRNA NOVEL OTTHUMG00000188150.1 10241 1344 17 ENSG00000157426.12 AASDH chr4 56338287 56387508 - protein_coding KNOWN OTTHUMG00000128841.5 49222 4654 99 ENSG00000242083.2 RPL7AP31 chr4 56356135 56356932 + processed_pseudogene KNOWN OTTHUMG00000157477.2 798 798 1 ENSG00000269921.1 RP11-646I6.5 chr4 56387625 56388153 + lincRNA NOVEL OTTHUMG00000183997.1 529 529 1 ENSG00000128059.7 PPAT chr4 56393362 56435615 - protein_coding KNOWN OTTHUMG00000128842.2 42254 5439 32 ENSG00000270147.1 RP11-646I6.6 chr4 56396312 56396871 + lincRNA NOVEL OTTHUMG00000183998.1 560 560 1 ENSG00000128050.7 PAICS chr4 56435741 56464579 + protein_coding KNOWN OTTHUMG00000160957.3 28839 7517 55 ENSG00000174780.14 SRP72 chr4 56466915 56503680 + protein_coding KNOWN OTTHUMG00000128843.11 36766 4697 55 ENSG00000196503.2 ARL9 chr4 56505343 56524448 + protein_coding KNOWN OTTHUMG00000184000.1 19106 1258 4 ENSG00000249693.2 THEGL chr4 56530609 56603507 + protein_coding KNOWN OTTHUMG00000160770.2 72899 1793 14 ENSG00000248590.2 GLDCP1 chr4 56593004 56595681 + transcribed_processed_pseudogene KNOWN OTTHUMG00000160768.4 2678 2678 1 ENSG00000177868.10 CCDC23 chr1 42807052 42817252 - protein_coding KNOWN OTTHUMG00000007566.1 10201 1208 9 ENSG00000171476.20 HOPX chr4 56647988 56681899 - protein_coding KNOWN OTTHUMG00000128768.15 33912 7753 45 ENSG00000280285.1 RP11-630A13.4 chr4 56662469 56665694 - TEC KNOWN OTTHUMG00000185293.1 3226 3226 1 ENSG00000241250.1 RPL17P20 chr4 56710060 56710614 + processed_pseudogene KNOWN OTTHUMG00000157478.1 555 555 1 ENSG00000227040.4 RP11-533F5.2 chr4 56760919 56761485 - processed_pseudogene KNOWN OTTHUMG00000160796.1 567 567 1 ENSG00000240545.3 RN7SL492P chr4 56794348 56794642 - misc_RNA KNOWN NA 295 295 1 ENSG00000281241.1 AC022483.1 chr4 56794354 56794438 - miRNA NOVEL NA 85 85 1 ENSG00000265894.2 RN7SL357P chr4 56805834 56806131 + misc_RNA KNOWN NA 298 298 1 ENSG00000128040.9 SPINK2 chr4 56809860 56821742 - protein_coding KNOWN OTTHUMG00000128769.2 11883 772 22 ENSG00000278226.1 Metazoa_SRP chr4 56810422 56810681 + misc_RNA NOVEL NA 260 260 1 ENSG00000251799.1 Y_RNA chr4 56818218 56818314 - misc_RNA NOVEL NA 97 97 1 ENSG00000164010.12 ERMAP chr1 42817124 42844989 + protein_coding KNOWN OTTHUMG00000007619.1 27866 4631 44 ENSG00000084093.14 REST chr4 56907876 56935844 + protein_coding KNOWN OTTHUMG00000128770.2 27969 7955 34 ENSG00000269949.1 RP11-738E22.3 chr4 56960927 56961373 - lincRNA NOVEL OTTHUMG00000184001.1 447 447 1 ENSG00000084092.6 NOA1 chr4 56963370 56978823 - protein_coding KNOWN OTTHUMG00000128773.3 15454 3415 7 ENSG00000047315.13 POLR2B chr4 56977722 57031168 + protein_coding KNOWN OTTHUMG00000128771.6 53447 5901 138 ENSG00000251703.1 RNU6-998P chr4 57002692 57002792 + snRNA KNOWN NA 101 101 1 ENSG00000163453.10 IGFBP7 chr4 57030773 57110385 - protein_coding KNOWN OTTHUMG00000128772.2 79613 1930 14 ENSG00000250384.1 UBE2CP3 chr4 57072683 57073132 + processed_pseudogene KNOWN OTTHUMG00000160776.1 450 450 1 ENSG00000245067.5 IGFBP7-AS1 chr4 57109762 57205510 + antisense NOVEL OTTHUMG00000161143.4 95749 1740 14 ENSG00000250192.1 RP11-300M6.1 chr4 57154577 57156452 + lincRNA NOVEL OTTHUMG00000162167.1 1876 560 3 ENSG00000243920.2 RPS26P24 chr4 57352999 57353329 - processed_pseudogene KNOWN OTTHUMG00000157479.4 331 331 1 ENSG00000228192.6 RP11-342M1.3 chr1 42834681 42846422 - antisense NOVEL OTTHUMG00000007621.1 11742 1617 15 ENSG00000248505.1 RP11-319E12.1 chr4 57425872 57465986 + lincRNA NOVEL OTTHUMG00000160663.3 40115 1038 6 ENSG00000251459.1 RP11-319E12.2 chr4 57491390 57495233 + lincRNA NOVEL OTTHUMG00000161225.2 3844 783 2 ENSG00000251049.2 RP11-685F15.1 chr4 57595940 57605872 - lincRNA NOVEL OTTHUMG00000162168.2 9933 735 2 ENSG00000250333.1 RP11-4O3.1 chr4 57605694 57658800 - lincRNA NOVEL OTTHUMG00000161707.1 53107 356 3 ENSG00000249831.2 RP11-4O3.2 chr4 57720035 57724655 + lincRNA NOVEL OTTHUMG00000162318.3 4621 2672 2 ENSG00000248660.1 SRIP1 chr4 58103147 58103434 + processed_pseudogene KNOWN OTTHUMG00000160660.1 288 288 1 ENSG00000249105.2 RP11-25L5.2 chr4 58117758 58118070 - processed_pseudogene KNOWN OTTHUMG00000160662.4 313 313 1 ENSG00000250340.1 RP11-577G20.1 chr4 58524515 58536328 - lincRNA NOVEL OTTHUMG00000161708.1 11814 427 3 ENSG00000250078.1 RP11-577G20.2 chr4 58562165 58565122 - lincRNA NOVEL OTTHUMG00000161714.1 2958 420 3 ENSG00000251339.4 RP11-506N2.1 chr4 58780626 58984152 - lincRNA NOVEL OTTHUMG00000161226.3 203527 1813 15 ENSG00000164011.16 ZNF691 chr1 42846573 42852477 + protein_coding KNOWN OTTHUMG00000007623.4 5905 2036 26 ENSG00000251266.1 RP11-340A13.2 chr4 58984282 59046959 + lincRNA NOVEL OTTHUMG00000161247.2 62678 749 5 ENSG00000249382.2 RP11-340A13.1 chr4 58987182 58988160 - processed_transcript NOVEL OTTHUMG00000161246.3 979 831 8 ENSG00000250375.2 RP11-340A13.3 chr4 59047020 59075256 - lincRNA NOVEL OTTHUMG00000161727.2 28237 305 3 ENSG00000249111.1 RP11-622J8.1 chr4 59152834 59176146 + lincRNA NOVEL OTTHUMG00000161728.1 23313 327 2 ENSG00000199780.1 Y_RNA chr4 59533786 59533898 + misc_RNA NOVEL NA 113 113 1 ENSG00000249392.1 RP11-725D20.1 chr4 59551142 59630324 - lincRNA NOVEL OTTHUMG00000161730.1 79183 558 6 ENSG00000249892.1 RP11-525J21.1 chr4 59767816 59792114 - lincRNA NOVEL OTTHUMG00000161731.2 24299 760 4 ENSG00000201676.1 Y_RNA chr4 59833175 59833276 + misc_RNA NOVEL NA 102 102 1 ENSG00000201775.1 RNU6-1325P chr4 59834063 59834167 + snRNA KNOWN NA 105 105 1 ENSG00000216027.1 AC095061.1 chr4 60663949 60664038 - miRNA NOVEL NA 90 90 1 ENSG00000233708.1 RP11-342M1.7 chr1 42886597 42888767 - processed_pseudogene KNOWN OTTHUMG00000007625.1 2171 1962 5 ENSG00000249066.1 RP11-593F5.2 chr4 60750586 60789999 + lincRNA NOVEL OTTHUMG00000161732.1 39414 584 3 ENSG00000248237.2 RP11-593F5.1 chr4 60784115 60784696 + processed_pseudogene KNOWN OTTHUMG00000160658.2 582 582 1 ENSG00000265829.1 MIR548AG1 chr4 60922619 60922684 + miRNA KNOWN NA 66 66 1 ENSG00000240152.2 RP11-16N2.1 chr4 61143656 61153962 + lincRNA NOVEL OTTHUMG00000160657.1 10307 829 6 ENSG00000150471.14 LPHN3 chr4 61201258 62078335 + protein_coding KNOWN OTTHUMG00000160690.2 877078 13998 385 ENSG00000241261.1 RPL17P19 chr4 61211652 61212203 + processed_pseudogene KNOWN OTTHUMG00000157483.1 552 552 1 ENSG00000205682.2 RP11-798L4.1 chr4 61420246 61428221 - lincRNA NOVEL OTTHUMG00000160689.1 7976 2079 3 ENSG00000226439.3 RP11-621K7.1 chr4 61775449 61775850 - processed_pseudogene KNOWN OTTHUMG00000157484.1 402 402 1 ENSG00000202169.1 Y_RNA chr4 61906313 61906408 + misc_RNA NOVEL NA 96 96 1 ENSG00000248692.4 LPHN3-AS1 chr4 62071752 62165554 - antisense NOVEL OTTHUMG00000160691.1 93803 947 28 ENSG00000197530.11 MIB2 chr1 1615415 1630610 + protein_coding KNOWN OTTHUMG00000074647.9 15196 8767 323 ENSG00000237090.1 RP11-342M1.6 chr1 42891094 42892430 - processed_pseudogene KNOWN OTTHUMG00000007624.1 1337 1326 2 ENSG00000225405.3 RPS15AP17 chr4 62105660 62106049 - processed_pseudogene KNOWN OTTHUMG00000157485.1 390 390 1 ENSG00000273583.1 AC007511.1 chr4 62143542 62143634 + miRNA NOVEL NA 93 93 1 ENSG00000241344.1 RPL21P47 chr4 62248294 62248770 + processed_pseudogene KNOWN OTTHUMG00000157487.1 477 477 1 ENSG00000250249.2 RP11-30P21.2 chr4 62291562 62292337 + processed_pseudogene KNOWN OTTHUMG00000160688.2 776 353 2 ENSG00000248847.2 RP11-26C10.1 chr4 62489495 62490218 - processed_pseudogene KNOWN OTTHUMG00000160669.2 724 724 1 ENSG00000248336.1 HMGN1P11 chr4 62510469 62510771 + processed_pseudogene KNOWN OTTHUMG00000162341.1 303 303 1 ENSG00000265085.1 AC110810.1 chr4 62595377 62595462 + miRNA NOVEL NA 86 86 1 ENSG00000180673.9 EXOC5P1 chr4 62816826 62818794 + processed_pseudogene KNOWN OTTHUMG00000160716.2 1969 1969 1 ENSG00000251055.2 RP11-257A22.1 chr4 63128311 63143881 + lincRNA NOVEL OTTHUMG00000162339.2 15571 672 3 ENSG00000231442.3 LARP1BP1 chr4 63350114 63351472 + processed_pseudogene KNOWN OTTHUMG00000160671.3 1359 1359 1 ENSG00000225099.1 ATP6V1E1P1 chr1 42903232 42903912 + processed_pseudogene KNOWN OTTHUMG00000007618.1 681 681 1 ENSG00000250775.1 RP11-12K22.1 chr4 63468701 63494278 - lincRNA NOVEL OTTHUMG00000161737.1 25578 448 3 ENSG00000205678.6 TECRL chr4 64275257 64409468 - protein_coding KNOWN OTTHUMG00000160680.6 134212 6023 43 ENSG00000252104.1 RNU6-191P chr4 64397694 64397787 - snRNA KNOWN NA 94 94 1 ENSG00000250768.1 DPP3P1 chr4 64430909 64433215 + processed_pseudogene KNOWN OTTHUMG00000160714.3 2307 2063 2 ENSG00000251430.1 RP11-63H19.1 chr4 64606418 64606613 + unprocessed_pseudogene KNOWN OTTHUMG00000162345.2 196 196 1 ENSG00000251385.2 RP11-63H19.2 chr4 64607703 64608831 - processed_pseudogene KNOWN OTTHUMG00000162338.3 1129 1129 1 ENSG00000249893.1 MTND6P16 chr4 64608905 64609424 + unprocessed_pseudogene KNOWN OTTHUMG00000162340.1 520 520 1 ENSG00000250169.1 MTND5P13 chr4 64609454 64610532 - processed_pseudogene KNOWN OTTHUMG00000162346.2 1079 1079 1 ENSG00000248259.1 RP11-63H19.5 chr4 64610616 64610909 - unprocessed_pseudogene KNOWN OTTHUMG00000162343.2 294 294 1 ENSG00000249045.1 RP11-63H19.8 chr4 64610980 64611308 - unprocessed_pseudogene KNOWN OTTHUMG00000162342.2 329 329 1 ENSG00000117394.18 SLC2A1 chr1 42925375 42959173 - protein_coding KNOWN OTTHUMG00000007657.7 33799 4927 48 ENSG00000248328.1 RP11-63H19.6 chr4 64611374 64611888 - unprocessed_pseudogene KNOWN OTTHUMG00000162344.1 515 515 1 ENSG00000244669.1 RP11-158O16.1 chr4 64767130 64767897 - processed_pseudogene KNOWN OTTHUMG00000157490.1 768 768 1 ENSG00000250125.1 RP11-707A18.1 chr4 64914281 65004500 - lincRNA NOVEL OTTHUMG00000160703.1 90220 4079 7 ENSG00000248447.2 RP11-633G11.1 chr4 65034634 65036017 - processed_pseudogene KNOWN OTTHUMG00000160704.2 1384 1384 1 ENSG00000248998.2 EFTUD1P2 chr4 65142703 65145763 - processed_pseudogene KNOWN OTTHUMG00000160702.2 3061 1603 5 ENSG00000249351.2 RP11-498E11.2 chr4 65216616 65217433 + processed_pseudogene KNOWN OTTHUMG00000160701.2 818 818 1 ENSG00000145242.12 EPHA5 chr4 65319563 65670495 - protein_coding KNOWN OTTHUMG00000129273.4 350933 9833 103 ENSG00000243199.1 RP11-408P14.1 chr4 65573459 65574328 + processed_pseudogene KNOWN OTTHUMG00000157492.1 870 870 1 ENSG00000250846.5 EPHA5-AS1 chr4 65669961 65698029 + lincRNA NOVEL OTTHUMG00000161982.1 28069 1258 8 ENSG00000248479.1 RP11-807H7.2 chr4 65702202 65705553 + lincRNA NOVEL OTTHUMG00000160709.1 3352 385 2 ENSG00000227533.4 SLC2A1-AS1 chr1 42959049 42983358 + lincRNA NOVEL OTTHUMG00000007699.1 24310 3364 7 ENSG00000222765.1 RNU2-40P chr4 65807240 65807435 - snRNA KNOWN NA 196 196 1 ENSG00000251527.1 RP11-51P8.1 chr4 65858761 65860204 + lincRNA NOVEL OTTHUMG00000160708.1 1444 768 2 ENSG00000249413.2 RP11-25H12.1 chr4 65998846 66150012 + lincRNA NOVEL OTTHUMG00000185534.1 151167 754 4 ENSG00000272304.1 RP11-19C24.1 chr4 66003281 66016792 + lincRNA NOVEL OTTHUMG00000160711.1 13512 552 2 ENSG00000236562.4 RP11-396M11.1 chr4 66094142 66094526 + processed_pseudogene KNOWN OTTHUMG00000160707.1 385 385 1 ENSG00000221563.1 MIR1269A chr4 66276824 66276928 + miRNA KNOWN NA 105 105 1 ENSG00000244099.1 RPS23P3 chr4 66431092 66431521 + processed_pseudogene KNOWN OTTHUMG00000157494.1 430 430 1 ENSG00000252890.1 RNU6-699P chr4 66897262 66897371 + snRNA KNOWN NA 110 110 1 ENSG00000250075.4 RP11-584P21.2 chr4 67417305 67468251 - lincRNA NOVEL OTTHUMG00000160726.3 50947 2286 9 ENSG00000206629.1 RNU1-63P chr4 67429591 67429754 - snRNA KNOWN NA 164 164 1 ENSG00000207256.1 RNU6-880P chr1 42991438 42991544 + snRNA KNOWN NA 107 107 1 ENSG00000274759.1 5S_rRNA chr4 67439992 67440118 + rRNA NOVEL NA 127 127 1 ENSG00000250030.2 RP11-584P21.4 chr4 67446267 67446574 + processed_pseudogene KNOWN OTTHUMG00000160747.3 308 308 1 ENSG00000145241.9 CENPC chr4 67468748 67545606 - protein_coding KNOWN OTTHUMG00000160735.4 76859 8613 79 ENSG00000035720.6 STAP1 chr4 67558728 67607337 + protein_coding KNOWN OTTHUMG00000129304.1 48610 1655 19 ENSG00000279464.1 RP11-17P16.1 chr4 67607856 67610313 - TEC KNOWN OTTHUMG00000176312.1 2458 2458 1 ENSG00000033178.11 UBA6 chr4 67612652 67701179 - protein_coding KNOWN OTTHUMG00000129299.5 88528 11432 75 ENSG00000270257.1 RP11-17P16.2 chr4 67638177 67638359 + processed_pseudogene KNOWN OTTHUMG00000184313.1 183 183 1 ENSG00000248049.5 UBA6-AS1 chr4 67701280 68080952 + antisense NOVEL OTTHUMG00000160769.4 379673 5575 28 ENSG00000250656.2 ST3GAL1P1 chr4 67716375 67717388 - processed_pseudogene KNOWN OTTHUMG00000160778.2 1014 1014 1 ENSG00000270228.1 RP11-453E17.3 chr4 67718996 67724262 - processed_pseudogene KNOWN OTTHUMG00000184936.1 5267 2046 5 ENSG00000277513.1 RP3-393B19.1 chr1 43104086 43104497 + processed_pseudogene KNOWN OTTHUMG00000187524.1 412 412 1 ENSG00000270292.1 RP11-453E17.4 chr4 67725183 67726395 - processed_pseudogene KNOWN OTTHUMG00000184938.1 1213 1213 1 ENSG00000109163.6 GNRHR chr4 67739328 67754360 - protein_coding KNOWN OTTHUMG00000129302.2 15033 2164 6 ENSG00000202374.1 SNORA62 chr4 67747236 67747386 + snoRNA NOVEL NA 151 151 1 ENSG00000232398.1 TMPRSS11CP chr4 67766480 67773854 - unprocessed_pseudogene KNOWN OTTHUMG00000154681.1 7375 683 4 ENSG00000153802.10 TMPRSS11D chr4 67820876 67884032 - protein_coding KNOWN OTTHUMG00000129300.4 63157 3294 46 ENSG00000187054.13 TMPRSS11A chr4 67909385 67964140 - protein_coding KNOWN OTTHUMG00000129303.4 54756 3970 39 ENSG00000229009.6 TMPRSS11GP chr4 67991684 68015768 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000154737.3 24085 1269 13 ENSG00000207428.1 RNU6-95P chr4 68003895 68004001 + snRNA KNOWN NA 107 107 1 ENSG00000227725.3 GCOM2 chr4 68038544 68039647 + processed_pseudogene KNOWN OTTHUMG00000160803.1 1104 1104 1 ENSG00000198092.5 TMPRSS11F chr4 68053198 68129880 - protein_coding KNOWN OTTHUMG00000129307.1 76683 2088 10 ENSG00000186973.9 FAM183A chr1 43145153 43156396 + protein_coding KNOWN OTTHUMG00000007286.3 11244 843 21 ENSG00000215127.6 SYT14P1 chr4 68061822 68063269 - transcribed_processed_pseudogene KNOWN OTTHUMG00000157371.2 1448 1448 2 ENSG00000250426.2 FTLP10 chr4 68182292 68212470 + transcribed_processed_pseudogene KNOWN OTTHUMG00000160804.4 30179 1501 4 ENSG00000250026.4 TMPRSS11BNL chr4 68184081 68218080 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000160802.5 34000 4338 25 ENSG00000185873.7 TMPRSS11B chr4 68226653 68245720 - protein_coding KNOWN OTTHUMG00000129301.2 19068 3378 18 ENSG00000250642.3 RP11-642E20.5 chr4 68282461 68285959 - unprocessed_pseudogene KNOWN OTTHUMG00000160820.3 3499 438 3 ENSG00000248639.2 RP11-642E20.2 chr4 68293127 68294364 + processed_pseudogene KNOWN OTTHUMG00000161658.2 1238 800 2 ENSG00000249531.2 RP11-642E20.3 chr4 68300325 68302459 + processed_pseudogene KNOWN OTTHUMG00000160816.2 2135 868 2 ENSG00000248122.1 APOOP4 chr4 68304343 68304939 - processed_pseudogene KNOWN OTTHUMG00000160819.1 597 597 1 ENSG00000083896.11 YTHDC1 chr4 68310387 68350089 - protein_coding KNOWN OTTHUMG00000129306.3 39703 7032 62 ENSG00000162840.4 MT2P1 chr4 68376323 68376505 + processed_pseudogene KNOWN OTTHUMG00000160744.1 183 183 1 ENSG00000117395.9 EBNA1BP2 chr1 43164175 43270936 - protein_coding KNOWN OTTHUMG00000007284.2 106762 3561 52 ENSG00000087128.8 TMPRSS11E chr4 68447449 68497604 + protein_coding KNOWN OTTHUMG00000160438.1 50156 2138 16 ENSG00000250566.1 UGT2B29P chr4 68509441 68517647 - unprocessed_pseudogene KNOWN OTTHUMG00000160743.1 8207 973 2 ENSG00000197888.2 UGT2B17 chr4 68537184 68568527 - protein_coding KNOWN OTTHUMG00000129305.1 31344 2077 6 ENSG00000196620.7 UGT2B15 chr4 68537413 68670628 - protein_coding KNOWN OTTHUMG00000161507.1 133216 2191 13 ENSG00000249472.1 RP11-1267H10.2 chr4 68614419 68615013 + processed_pseudogene KNOWN OTTHUMG00000161518.1 595 595 1 ENSG00000251101.1 RP11-1267H10.1 chr4 68615393 68616137 - processed_pseudogene KNOWN OTTHUMG00000161516.1 745 745 1 ENSG00000251074.1 RP11-1267H10.3 chr4 68626847 68628899 - unprocessed_pseudogene KNOWN OTTHUMG00000161501.1 2053 851 2 ENSG00000248635.1 RP11-1267H10.4 chr4 68704600 68712498 - unprocessed_pseudogene KNOWN OTTHUMG00000161503.1 7899 750 4 ENSG00000250376.1 CTD-2005D20.1 chr4 68784618 68787474 + unprocessed_pseudogene KNOWN OTTHUMG00000161502.1 2857 714 4 ENSG00000251236.1 RP11-468N14.1 chr4 68813995 68814727 + unprocessed_pseudogene KNOWN OTTHUMG00000161504.1 733 733 1 ENSG00000243710.6 CFAP57 chr1 43172149 43254358 + protein_coding KNOWN OTTHUMG00000007285.2 82210 5764 85 ENSG00000109181.10 UGT2B10 chr4 68815993 68831196 + protein_coding KNOWN OTTHUMG00000161505.1 15204 1931 12 ENSG00000251424.1 RP11-468N14.3 chr4 68834213 68834368 - unprocessed_pseudogene KNOWN OTTHUMG00000161510.1 156 156 1 ENSG00000249235.1 RP11-468N14.4 chr4 68861332 68861610 - unprocessed_pseudogene KNOWN OTTHUMG00000161500.1 279 279 1 ENSG00000251529.1 RP11-468N14.5 chr4 68877626 68880131 - unprocessed_pseudogene KNOWN OTTHUMG00000161511.1 2506 491 2 ENSG00000248547.2 RP11-468N14.6 chr4 68883885 68884440 - processed_pseudogene KNOWN OTTHUMG00000161519.2 556 556 1 ENSG00000248613.1 RP11-468N14.7 chr4 68900651 68900910 - unprocessed_pseudogene KNOWN OTTHUMG00000161512.1 260 260 1 ENSG00000272626.1 RP11-468N14.13 chr4 68901008 68906983 - lincRNA NOVEL OTTHUMG00000186291.1 5976 477 2 ENSG00000249985.1 RP11-468N14.8 chr4 68907918 68908034 - unprocessed_pseudogene KNOWN OTTHUMG00000161506.1 117 117 1 ENSG00000198277.6 RP11-468N14.09 chr4 68914928 68924741 - unprocessed_pseudogene KNOWN OTTHUMG00000161508.1 9814 716 4 ENSG00000135220.9 UGT2A3 chr4 68928463 68951791 - protein_coding KNOWN OTTHUMG00000129408.2 23329 3062 13 ENSG00000199240.1 RNA5SP46 chr1 43196417 43196536 + rRNA KNOWN NA 120 120 1 ENSG00000251498.1 RP11-468N14.10 chr4 68972999 68975993 - unprocessed_pseudogene KNOWN OTTHUMG00000161515.1 2995 706 4 ENSG00000249735.1 RP11-468N14.12 chr4 68985009 68988533 - unprocessed_pseudogene KNOWN OTTHUMG00000161499.1 3525 545 3 ENSG00000250277.2 RP11-468N14.11 chr4 68996935 68997709 - processed_pseudogene KNOWN OTTHUMG00000161517.2 775 775 1 ENSG00000213759.7 UGT2B11 chr4 69004618 69214731 - protein_coding KNOWN OTTHUMG00000129395.2 210114 2476 20 ENSG00000251685.3 RP11-813N20.1 chr4 69004862 69020414 - unprocessed_pseudogene KNOWN OTTHUMG00000161513.1 15553 1620 6 ENSG00000249890.1 RP11-813N20.2 chr4 69021656 69022340 - unprocessed_pseudogene KNOWN OTTHUMG00000161509.1 685 685 1 ENSG00000250919.1 RP11-813N20.3 chr4 69027831 69044578 + unprocessed_pseudogene KNOWN OTTHUMG00000161514.1 16748 1613 6 ENSG00000171234.12 UGT2B7 chr4 69051363 69112987 + protein_coding KNOWN OTTHUMG00000129404.4 61625 2259 27 ENSG00000248763.2 RP13-644M16.5 chr4 69066395 69069888 + unprocessed_pseudogene KNOWN OTTHUMG00000161836.2 3494 550 3 ENSG00000251284.2 RP13-644M16.1 chr4 69125274 69126451 + processed_pseudogene KNOWN OTTHUMG00000161625.3 1178 1178 1 ENSG00000189409.11 MMP23B chr1 1632095 1701810 + protein_coding KNOWN OTTHUMG00000074713.5 69716 2714 63 ENSG00000179178.9 TMEM125 chr1 43269994 43274002 + protein_coding KNOWN OTTHUMG00000007288.2 4009 2127 13 ENSG00000250100.2 RP13-644M16.3 chr4 69131351 69134814 + unprocessed_pseudogene KNOWN OTTHUMG00000161612.2 3464 576 3 ENSG00000251427.1 RP13-644M16.2 chr4 69144734 69147671 + unprocessed_pseudogene KNOWN OTTHUMG00000161614.1 2938 709 4 ENSG00000196472.4 RP13-644M16.4 chr4 69181660 69182372 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000161623.2 713 713 1 ENSG00000250696.4 RP11-704M14.1 chr4 69182100 69216766 + antisense NOVEL OTTHUMG00000161622.1 34667 3025 9 ENSG00000268803.1 RP11-704M14.2 chr4 69215908 69216635 - unprocessed_pseudogene KNOWN OTTHUMG00000161834.2 728 728 1 ENSG00000249763.1 RP11-618I10.1 chr4 69242628 69250815 + processed_pseudogene KNOWN OTTHUMG00000161624.1 8188 1415 5 ENSG00000135226.15 UGT2B28 chr4 69280487 69423402 + protein_coding KNOWN OTTHUMG00000129401.2 142916 2595 17 ENSG00000251691.2 RP11-618I10.4 chr4 69306469 69307173 - unprocessed_pseudogene KNOWN OTTHUMG00000161620.2 705 705 1 ENSG00000250612.1 RP11-618I10.2 chr4 69346609 69358177 + processed_pseudogene KNOWN OTTHUMG00000161621.1 11569 1433 5 ENSG00000268209.1 RP11-618I10.3 chr4 69387580 69388307 + unprocessed_pseudogene KNOWN OTTHUMG00000161611.2 728 728 1 ENSG00000253313.4 C1orf210 chr1 43281883 43285617 - protein_coding KNOWN OTTHUMG00000007289.2 3735 1516 6 ENSG00000215110.6 RP11-790I12.1 chr4 69389490 69402081 + processed_pseudogene KNOWN OTTHUMG00000161617.1 12592 1596 6 ENSG00000248824.2 RP11-790I12.6 chr4 69406931 69407655 + unprocessed_pseudogene KNOWN OTTHUMG00000161835.2 725 725 1 ENSG00000249956.3 RP11-790I12.2 chr4 69408836 69423164 + processed_pseudogene KNOWN OTTHUMG00000161615.1 14329 1251 7 ENSG00000250828.1 RP11-790I12.3 chr4 69437357 69441050 + unprocessed_pseudogene KNOWN OTTHUMG00000161616.1 3694 468 3 ENSG00000249686.1 RP11-790I12.4 chr4 69450014 69451613 + unprocessed_pseudogene KNOWN OTTHUMG00000161618.1 1600 236 2 ENSG00000264696.1 AC108078.1 chr4 69479331 69479434 + miRNA NOVEL NA 104 104 1 ENSG00000156096.11 UGT2B4 chr4 69480165 69526014 - protein_coding KNOWN OTTHUMG00000058891.3 45850 2489 27 ENSG00000248886.2 UGT2A3P7 chr4 69517667 69518400 - unprocessed_pseudogene KNOWN OTTHUMG00000161619.2 734 734 1 ENSG00000251177.2 RP11-401E5.2 chr4 69572391 69585527 - unprocessed_pseudogene KNOWN OTTHUMG00000161837.2 13137 1618 6 ENSG00000173610.10 UGT2A1 chr4 69588417 69653249 - protein_coding KNOWN OTTHUMG00000184942.2 64833 3289 34 ENSG00000066056.12 TIE1 chr1 43300993 43323108 + protein_coding KNOWN OTTHUMG00000007282.4 22116 6694 55 ENSG00000270386.1 UGT2A1 chr4 69589194 69653249 - protein_coding KNOWN OTTHUMG00000184943.2 64056 2376 7 ENSG00000271271.4 UGT2A2 chr4 69589309 69639642 - protein_coding KNOWN OTTHUMG00000129398.5 50334 1676 11 ENSG00000173597.7 SULT1B1 chr4 69721162 69787961 - protein_coding KNOWN OTTHUMG00000129407.5 66800 7356 19 ENSG00000236959.1 SULT1D1P chr4 69791872 69813888 - unitary_pseudogene KNOWN OTTHUMG00000154682.1 22017 882 7 ENSG00000109193.9 SULT1E1 chr4 69810780 69860152 - protein_coding KNOWN OTTHUMG00000129403.3 49373 2304 19 ENSG00000251489.2 RP11-736K12.1 chr4 69888877 69889406 + processed_pseudogene KNOWN OTTHUMG00000160771.2 530 530 1 ENSG00000126545.12 CSN1S1 chr4 69931081 69946574 + protein_coding KNOWN OTTHUMG00000160843.2 15494 985 61 ENSG00000135222.6 CSN2 chr4 69955256 69961007 - protein_coding KNOWN OTTHUMG00000129409.1 5752 1066 7 ENSG00000126549.8 STATH chr4 69995930 70002570 + protein_coding KNOWN OTTHUMG00000129394.2 6641 2176 30 ENSG00000279857.1 AC063956.1 chr4 70020979 70021229 - protein_coding KNOWN NA 251 51 2 ENSG00000117400.13 MPL chr1 43337807 43352772 + protein_coding KNOWN OTTHUMG00000007429.1 14966 2128 34 ENSG00000205649.6 HTN3 chr4 70028413 70036538 + protein_coding KNOWN OTTHUMG00000160841.3 8126 2077 28 ENSG00000126550.7 HTN1 chr4 70050402 70058845 + protein_coding KNOWN OTTHUMG00000129397.3 8444 3817 24 ENSG00000234124.5 CSN1S2AP chr4 70067386 70085290 + unitary_pseudogene KNOWN OTTHUMG00000160842.1 17905 886 33 ENSG00000187533.12 PRR27 chr4 70133616 70176799 + protein_coding KNOWN OTTHUMG00000129402.5 43184 5336 34 ENSG00000109205.15 ODAM chr4 70196496 70204576 + protein_coding KNOWN OTTHUMG00000129406.3 8081 1562 37 ENSG00000181617.5 FDCSP chr4 70226071 70235252 + protein_coding KNOWN OTTHUMG00000129393.1 9182 566 5 ENSG00000171209.3 CSN3 chr4 70242588 70251428 + protein_coding KNOWN OTTHUMG00000129399.1 8841 836 5 ENSG00000145309.5 CABS1 chr4 70334966 70337116 + protein_coding KNOWN OTTHUMG00000129405.3 2151 1532 2 ENSG00000109208.4 SMR3A chr4 70360761 70367158 + protein_coding KNOWN OTTHUMG00000160839.1 6398 665 3 ENSG00000171201.9 SMR3B chr4 70370093 70390244 + protein_coding KNOWN OTTHUMG00000129396.3 20152 1436 12 ENSG00000234694.1 RP1-92O14.3 chr1 43354684 43358658 - antisense NOVEL OTTHUMG00000007424.1 3975 661 3 ENSG00000171199.8 PROL1 chr4 70397882 70410194 + protein_coding KNOWN OTTHUMG00000160845.1 12313 1096 13 ENSG00000171195.9 MUC7 chr4 70430492 70482997 + protein_coding KNOWN OTTHUMG00000129916.3 52506 2798 23 ENSG00000187689.8 AMTN chr4 70518540 70532742 + protein_coding KNOWN OTTHUMG00000129906.2 14203 1037 18 ENSG00000178522.13 AMBN chr4 70592256 70607288 + protein_coding KNOWN OTTHUMG00000129913.2 15033 2009 40 ENSG00000132464.10 ENAM chr4 70628744 70686816 + protein_coding KNOWN OTTHUMG00000129914.4 58073 6522 18 ENSG00000132465.9 IGJ chr4 70655541 70681817 - protein_coding KNOWN OTTHUMG00000129909.3 26277 1680 28 ENSG00000132467.3 UTP3 chr4 70688479 70690551 + protein_coding KNOWN OTTHUMG00000129911.2 2073 2073 1 ENSG00000207448.1 RNU6-520P chr4 70701755 70701858 + snRNA KNOWN NA 104 104 1 ENSG00000207058.1 RNU6-784P chr4 70703018 70703123 - snRNA KNOWN NA 106 106 1 ENSG00000272986.1 RP11-46J23.1 chr4 70703747 70704491 - antisense NOVEL OTTHUMG00000186293.1 745 745 1 ENSG00000117399.12 CDC20 chr1 43358955 43363203 + protein_coding KNOWN OTTHUMG00000007420.2 4249 2038 28 ENSG00000018189.11 RUFY3 chr4 70704204 70807315 + protein_coding KNOWN OTTHUMG00000129910.3 103112 8070 110 ENSG00000132463.12 GRSF1 chr4 70815782 70839945 - protein_coding KNOWN OTTHUMG00000160846.4 24164 7785 70 ENSG00000207007.1 RNU6-891P chr4 70852130 70852240 + snRNA KNOWN NA 111 111 1 ENSG00000173542.7 MOB1B chr4 70902326 71022449 + protein_coding KNOWN OTTHUMG00000160844.2 120124 8801 28 ENSG00000156136.8 DCK chr4 70992538 71030914 + protein_coding KNOWN OTTHUMG00000129908.3 38377 3227 33 ENSG00000080493.12 SLC4A4 chr4 71187286 71572087 + protein_coding KNOWN OTTHUMG00000129907.3 384802 8361 121 ENSG00000249170.1 RP11-1J11.1 chr4 71300258 71301235 - processed_pseudogene KNOWN OTTHUMG00000160785.1 978 978 1 ENSG00000270098.1 LDHAL6EP chr4 71434405 71437924 - processed_pseudogene KNOWN OTTHUMG00000160110.2 3520 1143 2 ENSG00000145321.11 GC chr4 71741693 71804041 - protein_coding KNOWN OTTHUMG00000129915.3 62349 2381 75 ENSG00000222236.1 RNA5SP163 chr4 71759518 71759616 - rRNA KNOWN NA 99 99 1 ENSG00000066322.11 ELOVL1 chr1 43363397 43368074 - protein_coding KNOWN OTTHUMG00000007422.2 4678 2507 109 ENSG00000248567.1 RP11-545L5.1 chr4 71821305 71823980 - lincRNA NOVEL OTTHUMG00000160780.1 2676 583 4 ENSG00000056291.16 NPFFR2 chr4 72031804 72148067 + protein_coding KNOWN OTTHUMG00000129918.2 116264 2359 18 ENSG00000156140.7 ADAMTS3 chr4 72280969 72568799 - protein_coding KNOWN OTTHUMG00000129912.2 287831 6585 55 ENSG00000250877.1 RP11-373J21.1 chr4 72323028 72330751 + antisense NOVEL OTTHUMG00000160782.1 7724 425 2 ENSG00000278609.1 AC095056.1 chr4 72324535 72324602 - miRNA NOVEL NA 68 68 1 ENSG00000270665.1 HNRNPA1P67 chr4 72807267 72808192 + processed_pseudogene KNOWN OTTHUMG00000160810.2 926 926 1 ENSG00000252955.1 RNU4ATAC9P chr4 72965178 72965303 + snRNA KNOWN NA 126 126 1 ENSG00000210839.1 RNU6ATAC5P chr4 73026748 73026873 + snRNA KNOWN NA 126 126 1 ENSG00000163626.15 COX18 chr4 73052362 73069755 - protein_coding KNOWN OTTHUMG00000129917.5 17394 6976 25 ENSG00000132466.16 ANKRD17 chr4 73073376 73258798 - protein_coding KNOWN OTTHUMG00000160826.9 185423 12041 179 ENSG00000277622.1 MIR6734 chr1 43364648 43364715 - miRNA KNOWN NA 68 68 1 ENSG00000248641.1 HMGA1P2 chr4 73098822 73099145 + processed_pseudogene KNOWN OTTHUMG00000160837.1 324 324 1 ENSG00000250220.1 RP11-692D12.1 chr4 73259209 73317953 + antisense NOVEL OTTHUMG00000160836.1 58745 685 5 ENSG00000221639.1 SNORA3 chr4 73263960 73264084 + snoRNA NOVEL NA 125 125 1 ENSG00000249976.2 RP11-580P21.1 chr4 73337233 73337771 - processed_pseudogene KNOWN OTTHUMG00000160787.2 539 539 1 ENSG00000163631.15 ALB chr4 73397114 73421412 + protein_coding KNOWN OTTHUMG00000129919.4 24299 3377 160 ENSG00000081051.6 AFP chr4 73431138 73456174 + protein_coding KNOWN OTTHUMG00000130011.3 25037 3259 46 ENSG00000079557.4 AFM chr4 73481683 73504001 + protein_coding KNOWN OTTHUMG00000130004.3 22319 2244 17 ENSG00000250436.1 RP11-622A1.2 chr4 73508803 73534128 + lincRNA NOVEL OTTHUMG00000161581.1 25326 1193 8 ENSG00000249970.1 RP11-622A1.1 chr4 73543822 73544013 + processed_pseudogene KNOWN OTTHUMG00000161579.2 192 192 1 ENSG00000169435.12 RASSF6 chr4 73571550 73620631 - protein_coding KNOWN OTTHUMG00000130007.2 49082 6632 45 ENSG00000159479.15 MED8 chr1 43383917 43389808 - protein_coding KNOWN OTTHUMG00000007421.6 5892 2704 28 ENSG00000228277.1 AC112518.3 chr4 73710302 73714527 + lincRNA NOVEL OTTHUMG00000151319.2 4226 575 3 ENSG00000169429.9 CXCL8 chr4 73740506 73743716 + protein_coding KNOWN OTTHUMG00000151316.1 3211 2274 9 ENSG00000249051.2 RP11-447E20.1 chr4 73777636 73778060 - processed_pseudogene KNOWN OTTHUMG00000160786.2 425 425 1 ENSG00000124875.8 CXCL6 chr4 73836497 73849064 + protein_coding KNOWN OTTHUMG00000130010.3 12568 2183 10 ENSG00000250550.3 PPBPP1 chr4 73847866 73848829 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000160814.1 964 373 4 ENSG00000109272.3 PF4V1 chr4 73853189 73854155 + protein_coding KNOWN OTTHUMG00000130177.1 967 522 3 ENSG00000163739.4 CXCL1 chr4 73869393 73871242 + protein_coding KNOWN OTTHUMG00000160866.1 1850 1296 7 ENSG00000249920.2 HNRNPA1P55 chr4 73938604 73939558 - processed_pseudogene KNOWN OTTHUMG00000160860.2 955 955 1 ENSG00000250339.2 CXCL1P chr4 73944011 73944324 - processed_pseudogene KNOWN OTTHUMG00000160868.2 314 216 2 ENSG00000163737.3 PF4 chr4 73981077 73982124 - protein_coding KNOWN OTTHUMG00000130009.1 1048 604 3 ENSG00000229431.1 RP1-92O14.6 chr1 43385113 43389155 + antisense NOVEL OTTHUMG00000037499.1 4043 731 4 ENSG00000163736.3 PPBP chr4 73987038 73988197 - protein_coding KNOWN OTTHUMG00000130008.2 1160 715 3 ENSG00000163735.6 CXCL5 chr4 73995642 73998779 - protein_coding KNOWN OTTHUMG00000160871.1 3138 2538 4 ENSG00000244194.3 RN7SL218P chr4 74011578 74011876 + misc_RNA KNOWN NA 299 299 1 ENSG00000163734.4 CXCL3 chr4 74036589 74038807 - protein_coding KNOWN OTTHUMG00000160861.1 2219 2219 12 ENSG00000248848.1 PPBPP2 chr4 74054038 74055399 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000160862.1 1362 1362 4 ENSG00000251017.1 RP11-629B11.4 chr4 74085995 74086672 - processed_pseudogene KNOWN OTTHUMG00000160864.1 678 678 1 ENSG00000081041.8 CXCL2 chr4 74097035 74099293 - protein_coding KNOWN OTTHUMG00000160865.2 2259 1500 9 ENSG00000163738.17 MTHFD2L chr4 74114174 74303099 + protein_coding KNOWN OTTHUMG00000157135.2 188926 9819 84 ENSG00000269559.2 RP11-629B11.5 chr4 74156511 74158373 - antisense NOVEL OTTHUMG00000187203.1 1863 1863 1 ENSG00000182585.8 EPGN chr4 74308473 74315307 + protein_coding KNOWN OTTHUMG00000160869.1 6835 1814 40 ENSG00000248333.6 CDK11B chr1 1635227 1722818 - protein_coding KNOWN OTTHUMG00000078638.6 87592 3811 191 ENSG00000198198.12 SZT2 chr1 43389882 43452650 + protein_coding KNOWN OTTHUMG00000007423.6 62769 17331 125 ENSG00000265720.1 AC097470.1 chr4 74326886 74326963 + miRNA NOVEL NA 78 78 1 ENSG00000124882.3 EREG chr4 74365143 74388751 + protein_coding KNOWN OTTHUMG00000130005.2 23609 5717 10 ENSG00000250532.1 RP11-727M10.1 chr4 74418917 74440457 - antisense NOVEL OTTHUMG00000160863.1 21541 558 2 ENSG00000109321.9 AREG chr4 74445134 74455009 + protein_coding KNOWN OTTHUMG00000130006.2 9876 1648 13 ENSG00000249942.1 AC142293.3 chr4 74552584 74589481 - antisense NOVEL OTTHUMG00000160824.4 36898 732 6 ENSG00000174808.10 BTC chr4 74744759 74794686 - protein_coding KNOWN OTTHUMG00000130107.2 49928 2816 10 ENSG00000250356.1 HSPE1P23 chr4 74917822 74918138 + processed_pseudogene KNOWN OTTHUMG00000160825.1 317 286 2 ENSG00000169116.10 PARM1 chr4 74933095 75050115 + protein_coding KNOWN OTTHUMG00000160827.1 117021 5034 7 ENSG00000249717.1 RP11-44F21.3 chr4 74955974 74970362 - antisense NOVEL OTTHUMG00000160830.1 14389 3341 7 ENSG00000248165.1 RP11-44F21.2 chr4 74993877 75034824 - antisense NOVEL OTTHUMG00000160828.1 40948 590 4 ENSG00000229372.1 SZT2-AS1 chr1 43447776 43448644 - antisense NOVEL OTTHUMG00000007428.1 869 699 2 ENSG00000260265.1 RP11-44F21.5 chr4 75081702 75084717 - lincRNA NOVEL OTTHUMG00000176161.1 3016 1033 7 ENSG00000250315.2 RP11-44F21.4 chr4 75101477 75101943 + transcribed_processed_pseudogene KNOWN OTTHUMG00000160831.2 467 467 2 ENSG00000250560.2 RP11-598G2.1 chr4 75194867 75195079 + processed_pseudogene KNOWN OTTHUMG00000160838.2 213 213 1 ENSG00000251185.1 RP11-542G1.1 chr4 75269068 75361182 - lincRNA NOVEL OTTHUMG00000161880.1 92115 469 2 ENSG00000251454.1 RP11-542G1.2 chr4 75341279 75359024 - lincRNA NOVEL OTTHUMG00000161881.2 17746 422 4 ENSG00000251383.1 RP11-542G1.3 chr4 75354076 75362566 + lincRNA NOVEL OTTHUMG00000161884.1 8491 1143 4 ENSG00000248646.1 RP11-567N4.2 chr4 75361207 75434449 - lincRNA NOVEL OTTHUMG00000161882.1 73243 473 2 ENSG00000250735.4 RP11-567N4.3 chr4 75401195 75423023 + lincRNA NOVEL OTTHUMG00000161883.1 21829 800 7 ENSG00000163743.12 RCHY1 chr4 75479037 75514764 - protein_coding KNOWN OTTHUMG00000130105.2 35728 6565 100 ENSG00000174796.11 THAP6 chr4 75513946 75550473 + protein_coding KNOWN OTTHUMG00000130108.3 36528 7127 56 ENSG00000274975.1 MIR6735 chr1 43448539 43448611 + miRNA KNOWN NA 73 73 1 ENSG00000174792.9 C4orf26 chr4 75556048 75565885 + protein_coding KNOWN OTTHUMG00000130104.2 9838 2054 15 ENSG00000138769.9 CDKL2 chr4 75578005 75630716 - protein_coding KNOWN OTTHUMG00000130103.2 52712 3781 33 ENSG00000138757.13 G3BP2 chr4 75642782 75724525 - protein_coding KNOWN OTTHUMG00000130097.13 81744 7183 105 ENSG00000201644.2 Y_RNA chr4 75662120 75662213 - misc_RNA NOVEL NA 94 94 1 ENSG00000138768.13 USO1 chr4 75724593 75814286 + protein_coding KNOWN OTTHUMG00000160952.9 89694 4588 55 ENSG00000222644.1 RNU2-16P chr4 75829454 75829589 - snRNA KNOWN NA 136 136 1 ENSG00000229717.2 RP11-556N4.1 chr4 75830751 75832705 + antisense NOVEL OTTHUMG00000160835.1 1955 1955 1 ENSG00000156194.16 PPEF2 chr4 75859864 75902571 - protein_coding KNOWN OTTHUMG00000160915.5 42708 4979 60 ENSG00000138744.13 NAAA chr4 75913657 75941051 - protein_coding KNOWN OTTHUMG00000160855.8 27395 4459 52 ENSG00000198301.10 SDAD1 chr4 75940950 75990962 - protein_coding KNOWN OTTHUMG00000130111.6 50013 3491 106 ENSG00000178922.15 HYI chr1 43451003 43453989 - protein_coding KNOWN OTTHUMG00000007502.3 2987 2740 84 ENSG00000279909.1 AC110615.1 chr4 75949920 75957413 + protein_coding KNOWN NA 7494 1129 3 ENSG00000245928.2 RP11-630D6.5 chr4 75980790 76005942 + antisense NOVEL OTTHUMG00000160886.1 25153 1685 3 ENSG00000280671.1 AC112719.2 chr4 75991788 75992048 + protein_coding NOVEL NA 261 90 2 ENSG00000138755.5 CXCL9 chr4 76001275 76007488 - protein_coding KNOWN OTTHUMG00000160889.1 6214 2740 4 ENSG00000156219.15 ART3 chr4 76011184 76112802 + protein_coding KNOWN OTTHUMG00000130110.6 101619 3278 105 ENSG00000169245.5 CXCL10 chr4 76021117 76023497 - protein_coding KNOWN OTTHUMG00000160887.2 2381 1176 4 ENSG00000169248.11 CXCL11 chr4 76033682 76041415 - protein_coding KNOWN OTTHUMG00000130101.3 7734 1908 9 ENSG00000225846.4 RP11-630D6.1 chr4 76036750 76037064 - processed_pseudogene KNOWN OTTHUMG00000157495.3 315 315 1 ENSG00000265931.1 AC112719.1 chr4 76095408 76095508 + miRNA NOVEL NA 101 101 1 ENSG00000138750.13 NUP54 chr4 76114659 76148515 - protein_coding KNOWN OTTHUMG00000130098.3 33857 4062 107 ENSG00000229348.1 HYI-AS1 chr1 43453927 43456995 + antisense NOVEL OTTHUMG00000007503.1 3069 545 2 ENSG00000138760.7 SCARB2 chr4 76158737 76213893 - protein_coding KNOWN OTTHUMG00000130099.2 55157 5685 29 ENSG00000189157.12 FAM47E chr4 76214040 76283780 + protein_coding KNOWN OTTHUMG00000185390.1 69741 9508 36 ENSG00000272414.4 FAM47E-STBD1 chr4 76251721 76311129 + protein_coding KNOWN OTTHUMG00000160966.5 59409 3242 20 ENSG00000118804.8 FAM47E-STBD1 chr4 76306026 76311599 + protein_coding KNOWN OTTHUMG00000130109.2 5574 3420 2 ENSG00000163749.16 CCDC158 chr4 76312997 76421868 - protein_coding KNOWN OTTHUMG00000160916.5 108872 5860 56 ENSG00000249858.2 SNX5P1 chr4 76344550 76345590 + processed_pseudogene KNOWN OTTHUMG00000160833.2 1041 1041 1 ENSG00000212368.1 RNU6-1000P chr4 76356610 76356715 - snRNA KNOWN NA 106 106 1 ENSG00000240426.1 RP11-356M17.1 chr4 76401251 76401569 + processed_pseudogene KNOWN OTTHUMG00000157498.1 319 319 1 ENSG00000199857.1 SNORD50 chr4 76402076 76402146 + snoRNA NOVEL NA 71 71 1 ENSG00000138771.13 SHROOM3 chr4 76435100 76783253 + protein_coding KNOWN OTTHUMG00000157075.2 348154 13159 41 ENSG00000142949.15 PTPRF chr1 43525187 43623666 + protein_coding KNOWN OTTHUMG00000007501.4 98480 10712 240 ENSG00000221118.1 AC112249.1 chr4 76493247 76493386 - miRNA NOVEL NA 140 140 1 ENSG00000249278.1 RP11-688H10.1 chr4 76509284 76509719 - processed_pseudogene KNOWN OTTHUMG00000160829.1 436 436 1 ENSG00000207307.1 RNU6-145P chr4 76532222 76532327 - snRNA KNOWN NA 106 106 1 ENSG00000263445.1 MIR4450 chr4 76573568 76573632 + miRNA KNOWN NA 65 65 1 ENSG00000275761.1 AC112249.2 chr4 76575541 76575650 + miRNA NOVEL NA 110 110 1 ENSG00000231335.1 AC107072.2 chr4 76637623 76644368 + sense_intronic NOVEL OTTHUMG00000130102.2 6746 239 4 ENSG00000233860.1 RP11-359D14.2 chr4 76756960 76758474 - antisense NOVEL OTTHUMG00000157074.3 1515 555 2 ENSG00000224218.1 RP11-359D14.3 chr4 76758554 76801964 - antisense NOVEL OTTHUMG00000157073.1 43411 110 2 ENSG00000264124.1 AC104687.1 chr4 76853964 76854060 + miRNA NOVEL NA 97 97 1 ENSG00000270244.1 RP11-123J14.4 chr4 76886029 76886370 - processed_pseudogene KNOWN OTTHUMG00000184319.1 342 342 1 ENSG00000066135.11 KDM4A chr1 43650158 43705515 + protein_coding KNOWN OTTHUMG00000007560.2 55358 5172 43 ENSG00000242727.2 RP11-123J14.1 chr4 76891034 76891445 + processed_pseudogene KNOWN OTTHUMG00000157500.2 412 412 1 ENSG00000186212.3 SOWAHB chr4 76894928 76898147 - protein_coding KNOWN OTTHUMG00000160876.1 3220 3220 1 ENSG00000138758.10 SEPT11 chr4 76949703 77040384 + protein_coding KNOWN OTTHUMG00000160854.1 90682 9787 92 ENSG00000234036.4 TXNP6 chr4 76958860 76959169 - processed_pseudogene KNOWN OTTHUMG00000160877.1 310 310 1 ENSG00000118816.8 CCNI chr4 77047158 77076005 - protein_coding KNOWN OTTHUMG00000130106.2 28848 3741 32 ENSG00000214062.5 RPL7P17 chr4 77082403 77083126 - processed_pseudogene KNOWN OTTHUMG00000157502.2 724 724 1 ENSG00000271676.1 RP11-1E1.2 chr4 77112495 77113458 - processed_pseudogene KNOWN OTTHUMG00000184316.1 964 964 1 ENSG00000201641.1 RNU6-1187P chr4 77150328 77150437 - snRNA KNOWN NA 110 110 1 ENSG00000138764.12 CCNG2 chr4 77157151 77433388 + protein_coding KNOWN OTTHUMG00000130100.3 276238 7481 60 ENSG00000270669.1 CTB-179I1.3 chr4 77216416 77216878 - processed_pseudogene KNOWN OTTHUMG00000184944.1 463 463 1 ENSG00000236200.4 KDM4A-AS1 chr1 43699765 43708138 - antisense NOVEL OTTHUMG00000007557.1 8374 1931 17 ENSG00000250006.2 CTB-179I1.1 chr4 77311397 77312111 - processed_pseudogene KNOWN OTTHUMG00000160906.2 715 715 1 ENSG00000248831.2 CTB-179I1.2 chr4 77350370 77351235 - processed_pseudogene KNOWN OTTHUMG00000160908.2 866 866 1 ENSG00000249036.1 RP11-625I7.1 chr4 77394491 77494286 - lincRNA NOVEL OTTHUMG00000160909.1 99796 571 3 ENSG00000156234.7 CXCL13 chr4 77511753 77611834 + protein_coding KNOWN OTTHUMG00000130201.3 100082 1431 8 ENSG00000221711.1 SNORD75 chr4 77702746 77702803 - snoRNA NOVEL NA 58 58 1 ENSG00000138767.11 CNOT6L chr4 77713387 77819615 - protein_coding KNOWN OTTHUMG00000160832.5 106229 9367 67 ENSG00000169288.16 MRPL1 chr4 77862520 77952790 + protein_coding KNOWN OTTHUMG00000130200.4 90271 1943 31 ENSG00000250214.1 RP13-488H8.1 chr4 77864508 77864804 - processed_pseudogene KNOWN OTTHUMG00000160847.1 297 297 1 ENSG00000248926.1 RP11-777B9.1 chr4 77958000 77958780 - processed_pseudogene KNOWN OTTHUMG00000160852.1 781 781 1 ENSG00000248956.1 HMGB1P44 chr4 77963940 77964511 + processed_pseudogene KNOWN OTTHUMG00000160848.1 572 572 1 ENSG00000126091.18 ST3GAL3 chr1 43705824 43931165 + protein_coding KNOWN OTTHUMG00000007561.7 225342 4443 332 ENSG00000278187.1 AC114801.1 chr4 77965300 77965410 + miRNA NOVEL NA 111 111 1 ENSG00000248640.1 HNRNPA1P56 chr4 77987860 77988813 - processed_pseudogene KNOWN OTTHUMG00000160850.1 954 954 1 ENSG00000248128.1 RP11-777B9.4 chr4 78003143 78003439 + processed_pseudogene KNOWN OTTHUMG00000160851.1 297 297 1 ENSG00000249072.1 RP11-777B9.5 chr4 78008512 78008688 - processed_pseudogene KNOWN OTTHUMG00000160849.1 177 177 1 ENSG00000138759.16 FRAS1 chr4 78057570 78544269 + protein_coding KNOWN OTTHUMG00000160856.4 486700 20379 172 ENSG00000249565.2 SERBP1P5 chr4 78180866 78182046 - processed_pseudogene KNOWN OTTHUMG00000160901.2 1181 1181 1 ENSG00000221183.1 AC093897.1 chr4 78188336 78188423 + miRNA NOVEL NA 88 88 1 ENSG00000248117.1 MINOS1P4 chr4 78379197 78379514 + processed_pseudogene KNOWN OTTHUMG00000160898.1 318 318 1 ENSG00000138772.11 ANXA3 chr4 78551519 78610451 + protein_coding KNOWN OTTHUMG00000130198.8 58933 5123 73 ENSG00000200998.1 Y_RNA chr4 78632273 78632385 - misc_RNA NOVEL NA 113 113 1 ENSG00000229444.1 RP11-184I16.4 chr1 43709392 43727343 - antisense NOVEL OTTHUMG00000007703.1 17952 469 4 ENSG00000251442.4 LINC01094 chr4 78645903 78682699 + lincRNA NOVEL OTTHUMG00000160897.1 36797 2951 23 ENSG00000251019.1 HIGD1AP13 chr4 78648954 78649242 - processed_pseudogene KNOWN OTTHUMG00000160899.1 289 289 1 ENSG00000239793.1 RP11-109G23.1 chr4 78768499 78768750 + processed_pseudogene KNOWN OTTHUMG00000157503.1 252 252 1 ENSG00000260278.1 RP11-109G23.3 chr4 78773654 78775973 - antisense NOVEL OTTHUMG00000175992.1 2320 2320 1 ENSG00000138756.16 BMP2K chr4 78776342 78916372 + protein_coding KNOWN OTTHUMG00000160900.2 140031 9938 79 ENSG00000266270.1 MIR5096 chr4 78820752 78820821 + miRNA KNOWN NA 70 70 1 ENSG00000163291.13 PAQR3 chr4 78887127 78939438 - protein_coding KNOWN OTTHUMG00000161026.1 52312 12403 68 ENSG00000242175.3 RN7SL127P chr4 78898855 78899154 + misc_RNA KNOWN NA 300 300 1 ENSG00000249307.4 LINC01088 chr4 78971748 79308798 + antisense NOVEL OTTHUMG00000160858.4 337051 3995 35 ENSG00000156269.4 NAA11 chr4 79225694 79326050 - protein_coding KNOWN OTTHUMG00000160913.1 100357 2701 7 ENSG00000272004.1 RP11-345P4.10 chr1 1659325 1662602 + antisense NOVEL OTTHUMG00000185638.1 3278 400 2 ENSG00000233674.2 RP11-184I16.3 chr1 43743471 43743741 + processed_pseudogene KNOWN OTTHUMG00000007559.2 271 271 1 ENSG00000196475.5 GK2 chr4 79406352 79408293 - protein_coding KNOWN OTTHUMG00000130199.2 1942 1942 1 ENSG00000250334.4 LINC00989 chr4 79492416 79576460 + lincRNA NOVEL OTTHUMG00000160884.1 84045 2231 8 ENSG00000249646.2 OR7E94P chr4 79587302 79588130 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000160914.2 829 829 2 ENSG00000251399.1 RP11-234K19.1 chr4 79596542 79597173 + lincRNA NOVEL OTTHUMG00000160859.1 632 355 2 ENSG00000248408.1 RP11-452C8.1 chr4 79663761 79696837 + lincRNA NOVEL OTTHUMG00000161747.1 33077 741 4 ENSG00000251321.1 PCAT4 chr4 79827471 79877770 + lincRNA KNOWN OTTHUMG00000161746.1 50300 2247 5 ENSG00000212620.1 SNORA75 chr4 79843102 79843228 + snoRNA NOVEL NA 127 127 1 ENSG00000163297.15 ANTXR2 chr4 79901149 80125454 - protein_coding KNOWN OTTHUMG00000151982.2 224306 9864 96 ENSG00000236530.2 AC097711.1 chr4 80079532 80081122 + processed_pseudogene KNOWN OTTHUMG00000151983.2 1591 1591 1 ENSG00000244002.1 RP11-162K6.1 chr4 80161129 80162011 + processed_pseudogene KNOWN OTTHUMG00000157504.2 883 883 1 ENSG00000224751.2 SHMT1P1 chr1 43850300 43851611 - processed_pseudogene KNOWN OTTHUMG00000007558.2 1312 1312 1 ENSG00000248719.1 RP11-377G16.2 chr4 80183280 80190169 - antisense NOVEL OTTHUMG00000160883.1 6890 566 2 ENSG00000152784.14 PRDM8 chr4 80183879 80204329 + protein_coding KNOWN OTTHUMG00000160885.1 20451 4588 58 ENSG00000138675.15 FGF5 chr4 80266599 80336680 + protein_coding KNOWN OTTHUMG00000130288.2 70082 5998 15 ENSG00000197826.10 C4orf22 chr4 80335720 80963756 + protein_coding KNOWN OTTHUMG00000130289.3 628037 4478 40 ENSG00000232327.4 RP11-395C17.1 chr4 80386178 80388716 - processed_pseudogene KNOWN OTTHUMG00000160951.2 2539 2539 1 ENSG00000152785.6 BMP3 chr4 81030965 81057531 + protein_coding KNOWN OTTHUMG00000130292.1 26567 5734 3 ENSG00000138669.8 PRKG2 chr4 81087370 81215117 - protein_coding KNOWN OTTHUMG00000130296.3 127748 5116 107 ENSG00000251059.4 RP11-100N20.1 chr4 81164940 81193395 + antisense NOVEL OTTHUMG00000160880.1 28456 822 10 ENSG00000207065.1 RNU5A-2P chr4 81334303 81334418 + snRNA KNOWN NA 116 116 1 ENSG00000138670.15 RASGEF1B chr4 81426393 82044244 - protein_coding KNOWN OTTHUMG00000160890.4 617852 9765 68 ENSG00000117407.15 ARTN chr1 43933320 43937241 + protein_coding KNOWN OTTHUMG00000007705.2 3922 2658 41 ENSG00000251331.5 RP11-689K5.3 chr4 81602797 82044244 - lincRNA NOVEL OTTHUMG00000161063.1 441448 699 20 ENSG00000248282.1 RP11-112L18.1 chr4 81733385 81734207 - processed_pseudogene KNOWN OTTHUMG00000160938.1 823 823 1 ENSG00000248448.2 COX5BP1 chr4 81919995 81920387 - processed_pseudogene KNOWN OTTHUMG00000160936.2 393 393 1 ENSG00000252762.1 SNORA31 chr4 81928313 81928439 + snoRNA NOVEL NA 127 127 1 ENSG00000248543.2 NPM1P41 chr4 82010665 82013095 - processed_pseudogene KNOWN OTTHUMG00000160939.3 2431 831 3 ENSG00000250826.2 HNRNPA3P13 chr4 82128535 82129656 + processed_pseudogene KNOWN OTTHUMG00000160947.2 1122 1122 1 ENSG00000202485.1 RNU6-499P chr4 82174547 82174653 + snRNA KNOWN NA 107 107 1 ENSG00000234568.3 BIN2P1 chr4 82275071 82276600 + processed_pseudogene KNOWN OTTHUMG00000160953.1 1530 1530 1 ENSG00000273156.1 RP11-127B20.2 chr4 82344876 82345540 - lincRNA NOVEL OTTHUMG00000186308.1 665 665 1 ENSG00000138668.17 HNRNPD chr4 82352498 82374503 - protein_coding KNOWN OTTHUMG00000130290.3 22006 6981 68 ENSG00000237950.1 RP11-7O11.3 chr1 43944370 43946551 - antisense NOVEL OTTHUMG00000007704.1 2182 557 7 ENSG00000272677.1 RP11-127B20.3 chr4 82374301 82384027 + antisense NOVEL OTTHUMG00000186309.2 9727 906 3 ENSG00000250325.1 IGBP1P4 chr4 82401578 82402456 - processed_pseudogene KNOWN OTTHUMG00000160978.1 879 879 1 ENSG00000202440.1 SNORD42 chr4 82402638 82402706 - snoRNA NOVEL NA 69 69 1 ENSG00000152795.16 HNRNPDL chr4 82422564 82430408 - protein_coding KNOWN OTTHUMG00000130299.6 7845 5476 80 ENSG00000145293.13 ENOPH1 chr4 82430562 82461091 + protein_coding KNOWN OTTHUMG00000130295.4 30530 2025 30 ENSG00000249242.6 TMEM150C chr4 82483170 82562357 - protein_coding KNOWN OTTHUMG00000161083.4 79188 3671 29 ENSG00000214988.4 RPL7AP26 chr4 82490823 82491635 - processed_pseudogene KNOWN OTTHUMG00000157511.1 813 813 1 ENSG00000227304.3 RP11-791G16.2 chr4 82494786 82496278 - transcribed_processed_pseudogene KNOWN OTTHUMG00000157512.2 1493 1493 2 ENSG00000249960.2 RP11-791G16.5 chr4 82571137 82571814 + processed_pseudogene KNOWN OTTHUMG00000161120.2 678 362 2 ENSG00000248113.2 RP11-791G16.4 chr4 82580117 82581384 - processed_pseudogene KNOWN OTTHUMG00000161122.2 1268 1268 1 ENSG00000117408.9 IPO13 chr1 43946939 43968022 + protein_coding KNOWN OTTHUMG00000008297.2 21084 5083 42 ENSG00000231782.5 LINC00575 chr4 82613113 82621437 - lincRNA NOVEL OTTHUMG00000161121.2 8325 910 8 ENSG00000145284.10 SCD5 chr4 82629539 82798857 - protein_coding KNOWN OTTHUMG00000130293.1 169319 4292 9 ENSG00000270480.1 RP11-57B24.1 chr4 82691737 82692468 + processed_pseudogene KNOWN OTTHUMG00000184986.1 732 732 1 ENSG00000207746.1 MIR575 chr4 82753337 82753430 - miRNA KNOWN NA 94 94 1 ENSG00000270842.1 RP11-57B24.2 chr4 82775461 82776101 + processed_pseudogene KNOWN OTTHUMG00000185000.1 641 360 2 ENSG00000138674.15 SEC31A chr4 82818661 82901166 - protein_coding KNOWN OTTHUMG00000130297.10 82506 9145 491 ENSG00000251022.5 THAP9-AS1 chr4 82893009 82900960 - antisense NOVEL OTTHUMG00000160729.2 7952 4397 42 ENSG00000168152.11 THAP9 chr4 82900684 82919969 + protein_coding KNOWN OTTHUMG00000130291.2 19286 4332 28 ENSG00000189308.9 LIN54 chr4 82909973 83012926 - protein_coding KNOWN OTTHUMG00000130287.2 102954 6768 107 ENSG00000199530.1 Y_RNA chr4 82944738 82944845 - misc_RNA NOVEL NA 108 108 1 ENSG00000132768.12 DPH2 chr1 43970000 43973369 + protein_coding KNOWN OTTHUMG00000008295.2 3370 2930 61 ENSG00000251874.1 RNU6-615P chr4 83003412 83003517 + snRNA KNOWN NA 106 106 1 ENSG00000138663.7 COPS4 chr4 83034447 83075818 + protein_coding KNOWN OTTHUMG00000130298.2 41372 3566 69 ENSG00000145287.9 PLAC8 chr4 83090048 83137075 - protein_coding KNOWN OTTHUMG00000130294.2 47028 3853 29 ENSG00000250057.1 RP11-576N17.5 chr4 83233512 83247213 - lincRNA NOVEL OTTHUMG00000161156.3 13702 394 3 ENSG00000250677.1 RP11-576N17.2 chr4 83237303 83237444 + processed_pseudogene KNOWN OTTHUMG00000161155.1 142 142 1 ENSG00000248401.2 RP11-576N17.3 chr4 83247179 83248206 + processed_pseudogene KNOWN OTTHUMG00000161152.2 1028 1028 1 ENSG00000173085.12 COQ2 chr4 83261536 83284914 - protein_coding KNOWN OTTHUMG00000160940.5 23379 2774 31 ENSG00000173083.13 HPSE chr4 83292461 83335153 - protein_coding KNOWN OTTHUMG00000130425.4 42693 4721 82 ENSG00000274154.1 RP11-576N17.6 chr4 83369416 83369523 - processed_pseudogene KNOWN OTTHUMG00000187579.1 108 108 1 ENSG00000251647.2 RP11-576N17.4 chr4 83377363 83378076 - processed_pseudogene KNOWN OTTHUMG00000161153.2 714 639 2 ENSG00000117410.12 ATP6V0B chr1 43974487 43978295 + protein_coding KNOWN OTTHUMG00000008298.2 3809 3535 74 ENSG00000163312.9 HELQ chr4 83407343 83455856 - protein_coding KNOWN OTTHUMG00000130423.5 48514 3713 60 ENSG00000163319.9 MRPS18C chr4 83455932 83469735 + protein_coding KNOWN OTTHUMG00000130430.4 13804 4866 35 ENSG00000163322.12 FAM175A chr4 83459517 83523348 - protein_coding KNOWN OTTHUMG00000130429.16 63832 7777 56 ENSG00000213608.5 SLC25A14P1 chr4 83477524 83478424 + processed_pseudogene KNOWN OTTHUMG00000161154.2 901 901 1 ENSG00000239525.1 RPL30P5 chr4 83502699 83503034 + processed_pseudogene KNOWN OTTHUMG00000157514.1 336 336 1 ENSG00000138678.9 AGPAT9 chr4 83535914 83605875 + protein_coding KNOWN OTTHUMG00000130431.3 69962 3468 52 ENSG00000201633.1 Y_RNA chr4 83636196 83636290 - misc_RNA NOVEL NA 95 95 1 ENSG00000249171.1 RP11-767N15.1 chr4 83668510 83731755 - lincRNA NOVEL OTTHUMG00000161151.1 63246 791 4 ENSG00000281366.1 AC021192.1 chr4 83748198 83748329 - miRNA NOVEL NA 132 132 1 ENSG00000250546.4 RP11-8L2.1 chr4 83796436 84293412 - processed_transcript NOVEL OTTHUMG00000160961.1 496977 3588 16 ENSG00000117411.15 B4GALT2 chr1 43978943 43991170 + protein_coding KNOWN OTTHUMG00000008296.1 12228 3772 41 ENSG00000200108.1 RNU6-774P chr4 84233657 84233763 + snRNA KNOWN NA 107 107 1 ENSG00000214980.4 RP11-274J2.1 chr4 84244003 84245488 + processed_pseudogene KNOWN OTTHUMG00000160895.1 1486 1486 1 ENSG00000248749.1 RP11-42A4.1 chr4 84371393 84380189 - lincRNA NOVEL OTTHUMG00000160894.1 8797 702 3 ENSG00000163623.8 NKX6-1 chr4 84491987 84498450 - protein_coding KNOWN OTTHUMG00000130426.4 6464 3086 6 ENSG00000258013.2 RPL3P13 chr4 84544304 84544519 - processed_pseudogene KNOWN OTTHUMG00000170561.2 216 216 1 ENSG00000163624.5 CDS1 chr4 84582979 84651338 + protein_coding KNOWN OTTHUMG00000130428.2 68360 4461 17 ENSG00000163625.14 WDFY3 chr4 84669610 84966391 - protein_coding KNOWN OTTHUMG00000130424.4 296782 16856 126 ENSG00000239466.3 RN7SL552P chr4 84687725 84688000 - misc_RNA KNOWN NA 276 276 1 ENSG00000251260.1 WDFY3-AS1 chr4 84803258 84810391 + antisense NOVEL OTTHUMG00000160941.1 7134 493 2 ENSG00000252062.1 RNU6-469P chr4 84886386 84886486 - snRNA KNOWN NA 101 101 1 ENSG00000159214.11 CCDC24 chr1 43991359 43996528 + protein_coding KNOWN OTTHUMG00000008299.3 5170 3554 71 ENSG00000180769.7 WDFY3-AS2 chr4 84965682 85011277 + processed_transcript KNOWN OTTHUMG00000141281.4 45596 6203 14 ENSG00000201901.1 RN7SKP48 chr4 85100496 85100823 + misc_RNA KNOWN NA 328 328 1 ENSG00000248725.3 RP11-218C23.1 chr4 85246157 85246912 + processed_pseudogene KNOWN OTTHUMG00000160956.3 756 756 1 ENSG00000138639.16 ARHGAP24 chr4 85475114 86002670 + protein_coding KNOWN OTTHUMG00000130427.4 527557 7908 62 ENSG00000266421.2 AC097108.1 chr4 85722443 85722550 + miRNA NOVEL NA 108 108 1 ENSG00000265774.1 AC098870.1 chr4 85910478 85910543 - miRNA NOVEL NA 66 66 1 ENSG00000273389.1 RP13-514E23.2 chr4 86000327 86000766 - antisense NOVEL OTTHUMG00000186310.1 440 440 1 ENSG00000261496.1 RP13-514E23.1 chr4 86012296 86013874 - sense_overlapping NOVEL OTTHUMG00000176279.1 1579 1579 1 ENSG00000109339.17 MAPK10 chr4 86015123 86594131 - protein_coding KNOWN OTTHUMG00000130604.7 579009 9816 227 ENSG00000250062.4 RP11-778J15.1 chr4 86117912 86219926 + antisense NOVEL OTTHUMG00000161054.1 102015 1100 7 ENSG00000196517.10 SLC6A9 chr1 43991500 44031467 - protein_coding KNOWN OTTHUMG00000008294.2 39968 5159 96 ENSG00000252757.1 RN7SKP96 chr4 86336318 86336614 - misc_RNA KNOWN NA 297 297 1 ENSG00000266515.1 MIR4452 chr4 86542482 86542552 - miRNA KNOWN NA 71 71 1 ENSG00000163629.11 PTPN13 chr4 86594315 86815171 + protein_coding KNOWN OTTHUMG00000160968.1 220857 9496 253 ENSG00000145283.7 SLC10A6 chr4 86823468 86849263 - protein_coding KNOWN OTTHUMG00000130596.3 25796 1502 10 ENSG00000243312.3 RP11-397E7.1 chr4 86870191 86871404 + processed_pseudogene KNOWN OTTHUMG00000157516.3 1214 861 2 ENSG00000163633.9 C4orf36 chr4 86876205 86936202 - protein_coding KNOWN OTTHUMG00000130597.3 59998 5270 50 ENSG00000250202.2 RP11-397E7.2 chr4 86876338 86876652 + processed_pseudogene KNOWN OTTHUMG00000160967.2 315 315 1 ENSG00000251411.1 RP11-397E7.4 chr4 86913266 86914817 - processed_pseudogene KNOWN OTTHUMG00000160970.1 1552 1110 3 ENSG00000172493.19 AFF1 chr4 86935002 87141054 + protein_coding KNOWN OTTHUMG00000130603.6 206053 10733 107 ENSG00000235043.3 TECRP1 chr4 86949669 86950113 - processed_pseudogene KNOWN OTTHUMG00000160969.1 445 445 1 ENSG00000269981.1 RP11-34P13.16 chr1 137682 137965 - processed_pseudogene KNOWN OTTHUMG00000182738.2 284 284 1 ENSG00000189339.10 SLC35E2B chr1 1659529 1692728 - protein_coding KNOWN OTTHUMG00000078639.3 33200 8395 34 ENSG00000230615.5 RP5-1198O20.4 chr1 44030443 44115913 + lincRNA NOVEL OTTHUMG00000008300.5 85471 7999 77 ENSG00000145332.12 KLHL8 chr4 87160103 87240314 - protein_coding KNOWN OTTHUMG00000130593.2 80212 7354 58 ENSG00000248196.1 RP11-476C8.2 chr4 87166844 87167734 + processed_pseudogene KNOWN OTTHUMG00000160971.1 891 891 1 ENSG00000248180.1 GAPDHP60 chr4 87207092 87208086 + processed_pseudogene KNOWN OTTHUMG00000159978.1 995 995 1 ENSG00000250572.1 RP11-529H2.1 chr4 87261931 87266822 - lincRNA NOVEL OTTHUMG00000161058.1 4892 257 2 ENSG00000263981.1 MIR5705 chr4 87300495 87300583 - miRNA KNOWN NA 89 89 1 ENSG00000170509.10 HSD17B13 chr4 87303789 87322906 - protein_coding KNOWN OTTHUMG00000130602.2 19118 2397 13 ENSG00000255723.1 RP11-529H2.2 chr4 87317170 87345210 - processed_transcript NOVEL OTTHUMG00000168283.1 28041 349 4 ENSG00000198189.9 HSD17B11 chr4 87336610 87391386 - protein_coding KNOWN OTTHUMG00000130594.5 54777 2435 34 ENSG00000240966.3 RN7SL681P chr4 87386883 87387174 - misc_RNA KNOWN NA 292 292 1 ENSG00000249262.2 RP11-710E1.1 chr4 87410644 87411388 + processed_pseudogene KNOWN OTTHUMG00000161059.2 745 745 1 ENSG00000227163.2 RP5-1198O20.5 chr1 44087958 44088477 - processed_pseudogene KNOWN OTTHUMG00000008302.2 520 520 1 ENSG00000280481.1 Y_RNA chr4 87412228 87412346 + misc_RNA NOVEL NA 119 119 1 ENSG00000170502.11 NUDT9 chr4 87422582 87459454 + protein_coding KNOWN OTTHUMG00000130591.3 36873 3184 43 ENSG00000272856.1 RP11-710E1.2 chr4 87460807 87462280 - lincRNA NOVEL OTTHUMG00000186311.1 1474 491 2 ENSG00000152583.11 SPARCL1 chr4 87473335 87531061 - protein_coding KNOWN OTTHUMG00000130605.3 57727 3477 69 ENSG00000281790.1 AC093906.1 chr4 87532543 87532677 + miRNA NOVEL NA 135 135 1 ENSG00000249001.4 RP11-742B18.1 chr4 87568035 87733956 - antisense NOVEL OTTHUMG00000161060.1 165922 1825 12 ENSG00000152591.11 DSPP chr4 87608529 87616910 + protein_coding KNOWN OTTHUMG00000161061.3 8382 4373 9 ENSG00000152592.12 DMP1 chr4 87650307 87664361 + protein_coding KNOWN OTTHUMG00000130598.2 14055 2682 11 ENSG00000200024.1 Y_RNA chr4 87743952 87744053 - misc_RNA NOVEL NA 102 102 1 ENSG00000249973.2 CHCHD2P7 chr4 87785920 87786371 - processed_pseudogene KNOWN OTTHUMG00000160999.2 452 452 1 ENSG00000271647.1 KRT8P47 chr1 44103306 44104703 - processed_pseudogene KNOWN OTTHUMG00000184285.1 1398 1398 1 ENSG00000029559.6 IBSP chr4 87799581 87812435 + protein_coding KNOWN OTTHUMG00000130600.3 12855 1546 7 ENSG00000152595.15 MEPE chr4 87821411 87846817 + protein_coding KNOWN OTTHUMG00000130592.5 25407 2477 46 ENSG00000183199.6 HSP90AB3P chr4 87891843 87894015 + processed_pseudogene KNOWN OTTHUMG00000160981.1 2173 2173 1 ENSG00000118785.12 SPP1 chr4 87975650 87983426 + protein_coding KNOWN OTTHUMG00000130599.4 7777 2321 65 ENSG00000202000.1 RNU1-36P chr4 88000237 88000401 + snRNA KNOWN NA 165 165 1 ENSG00000118762.6 PKD2 chr4 88007668 88077777 + protein_coding KNOWN OTTHUMG00000160982.5 70110 5498 55 ENSG00000118777.9 ABCG2 chr4 88090264 88231322 - protein_coding KNOWN OTTHUMG00000130601.3 141059 4848 40 ENSG00000241853.1 RP11-147K6.1 chr4 88163579 88163967 + processed_pseudogene KNOWN OTTHUMG00000157518.1 389 389 1 ENSG00000201707.1 RNU6-818P chr4 88201703 88201810 + snRNA KNOWN NA 108 108 1 ENSG00000221440.1 RNU6ATAC31P chr4 88206427 88206552 - snRNA KNOWN NA 126 126 1 ENSG00000281534.1 AL139220.1 chr1 44103945 44104079 + miRNA NOVEL NA 135 135 1 ENSG00000251285.2 RP11-147K6.2 chr4 88220569 88223837 - processed_pseudogene KNOWN OTTHUMG00000161000.2 3269 251 2 ENSG00000199326.1 RNU6-1298P chr4 88226729 88226829 + snRNA KNOWN NA 101 101 1 ENSG00000163644.13 PPM1K chr4 88257620 88284769 - protein_coding KNOWN OTTHUMG00000130952.5 27150 11371 39 ENSG00000200469.1 RNU6-112P chr4 88275205 88275308 - snRNA KNOWN NA 104 104 1 ENSG00000246375.2 RP11-10L7.1 chr4 88284942 88331421 + lincRNA NOVEL OTTHUMG00000160984.1 46480 1654 5 ENSG00000207480.1 Y_RNA chr4 88330176 88330278 - misc_RNA NOVEL NA 103 103 1 ENSG00000138642.13 HERC6 chr4 88378739 88443111 + protein_coding KNOWN OTTHUMG00000160983.5 64373 5793 89 ENSG00000138646.7 HERC5 chr4 88457117 88506163 + protein_coding KNOWN OTTHUMG00000130953.5 49047 4766 68 ENSG00000221079.2 AC083829.1 chr4 88493933 88494017 + miRNA NOVEL NA 85 85 1 ENSG00000249934.2 RP11-466G12.3 chr4 88508591 88510403 - processed_pseudogene KNOWN OTTHUMG00000160997.3 1813 1813 1 ENSG00000239560.3 RN7SL479P chr1 44117098 44117397 - misc_RNA KNOWN NA 300 300 1 ENSG00000145337.4 PYURF chr4 88520985 88523813 - protein_coding KNOWN OTTHUMG00000130949.1 2829 1361 2 ENSG00000138641.14 HERC3 chr4 88521048 88708542 + protein_coding KNOWN OTTHUMG00000150436.7 187495 8634 105 ENSG00000255072.1 PIGY chr4 88521573 88521789 - protein_coding KNOWN OTTHUMG00000166563.1 217 217 1 ENSG00000249755.2 RP11-466G12.2 chr4 88527160 88528170 + processed_pseudogene KNOWN OTTHUMG00000160998.3 1011 657 2 ENSG00000252322.1 RN7SKP244 chr4 88583666 88583972 - misc_RNA KNOWN NA 307 307 1 ENSG00000207524.1 RNU6-33P chr4 88684848 88684954 - snRNA KNOWN NA 107 107 1 ENSG00000177432.6 NAP1L5 chr4 88695915 88698235 - protein_coding KNOWN OTTHUMG00000130950.1 2321 2321 1 ENSG00000248019.2 FAM13A-AS1 chr4 88709789 88730103 + antisense NOVEL OTTHUMG00000161035.1 20315 4510 7 ENSG00000278151.1 FAM13A-AS1_1 chr4 88710147 88710265 + misc_RNA NOVEL NA 119 119 1 ENSG00000276003.1 FAM13A-AS1_2 chr4 88723209 88723316 + misc_RNA NOVEL NA 108 108 1 ENSG00000171872.4 KLF17 chr1 44118850 44135140 + protein_coding KNOWN OTTHUMG00000009664.1 16291 3131 8 ENSG00000138640.13 FAM13A chr4 88725955 89111398 - protein_coding KNOWN OTTHUMG00000161006.1 385444 13215 201 ENSG00000180346.3 TIGD2 chr4 89111500 89114899 + protein_coding KNOWN OTTHUMG00000130946.3 3400 3217 3 ENSG00000270720.1 RP11-84C13.2 chr4 89119284 89119871 + lincRNA NOVEL OTTHUMG00000185169.1 588 588 1 ENSG00000212226.1 RNU6-907P chr4 89130852 89130953 + snRNA KNOWN NA 102 102 1 ENSG00000185477.4 GPRIN3 chr4 89236386 89308010 - protein_coding KNOWN OTTHUMG00000161044.2 71625 15205 3 ENSG00000251095.5 RP11-115D19.1 chr4 89551356 89726752 + antisense NOVEL OTTHUMG00000161187.3 175397 6069 29 ENSG00000145335.14 SNCA chr4 89724099 89838315 - protein_coding KNOWN OTTHUMG00000130948.5 114217 4014 64 ENSG00000274238.1 RP11-115D19.3 chr4 89743792 89744305 + antisense NOVEL OTTHUMG00000187515.1 514 514 1 ENSG00000277695.1 RP11-115D19.4 chr4 89747802 89755853 + antisense NOVEL OTTHUMG00000187516.1 8052 522 4 ENSG00000276542.1 RP11-115D19.2 chr4 89748283 89749154 + antisense NOVEL OTTHUMG00000187517.1 872 872 1 ENSG00000233514.1 RP11-570P14.1 chr1 44122153 44122512 - processed_pseudogene KNOWN OTTHUMG00000009626.1 360 360 1 ENSG00000247775.2 SNCA-AS1 chr4 89836408 89841978 + antisense NOVEL OTTHUMG00000161186.1 5571 2990 6 ENSG00000138722.8 MMRN1 chr4 89879532 89954629 + protein_coding KNOWN OTTHUMG00000130947.2 75098 5510 27 ENSG00000184305.13 CCSER1 chr4 90127535 91601913 + protein_coding KNOWN OTTHUMG00000160950.4 1474379 10428 76 ENSG00000252087.1 RN7SKP248 chr4 90370123 90370427 + misc_RNA KNOWN NA 305 305 1 ENSG00000251401.2 RP11-11N6.1 chr4 90682996 90683123 + processed_pseudogene KNOWN OTTHUMG00000161033.2 128 128 1 ENSG00000187653.11 TMSB4XP8 chr4 90838903 90839037 - processed_pseudogene KNOWN OTTHUMG00000130951.3 135 135 1 ENSG00000248984.1 AC004054.1 chr4 91108023 91112790 - antisense NOVEL OTTHUMG00000161005.2 4768 270 2 ENSG00000249049.1 RP11-763F8.1 chr4 91319034 91325306 - antisense NOVEL OTTHUMG00000161004.2 6273 375 3 ENSG00000279013.1 RP11-254A24.2 chr4 91603275 91605292 + TEC KNOWN OTTHUMG00000176035.1 2018 2018 1 ENSG00000249891.2 KRT19P6 chr4 91885046 91885254 - processed_pseudogene KNOWN OTTHUMG00000161034.2 209 209 1 ENSG00000239275.1 RP4-675G8.2 chr1 44137842 44138813 - unprocessed_pseudogene KNOWN OTTHUMG00000007489.3 972 320 2 ENSG00000249052.1 RP11-354O24.1 chr4 91887886 91904335 + lincRNA NOVEL OTTHUMG00000161032.2 16450 577 4 ENSG00000248817.1 PMPCAP1 chr4 92182477 92184052 - processed_pseudogene KNOWN OTTHUMG00000160921.1 1576 1576 1 ENSG00000280056.1 RP11-562F9.3 chr4 92260367 92260751 - TEC KNOWN OTTHUMG00000176166.1 385 385 1 ENSG00000249152.1 RP11-562F9.2 chr4 92268767 92277075 - lincRNA NOVEL OTTHUMG00000160917.1 8309 616 2 ENSG00000248511.1 RP11-9B6.1 chr4 92297251 92304178 - lincRNA NOVEL OTTHUMG00000160923.1 6928 592 3 ENSG00000152208.10 GRID2 chr4 92303622 93774556 + protein_coding KNOWN OTTHUMG00000130975.5 1470935 7508 69 ENSG00000251449.2 MTND1P19 chr4 92702345 92702659 + processed_pseudogene KNOWN OTTHUMG00000160924.2 315 315 1 ENSG00000249239.2 RP11-428L21.2 chr4 92821986 92822918 - processed_pseudogene KNOWN OTTHUMG00000160922.2 933 933 1 ENSG00000248627.1 RP11-428L21.1 chr4 92833685 92838842 - antisense NOVEL OTTHUMG00000160918.1 5158 349 2 ENSG00000248750.2 RP11-131K17.1 chr4 92884663 92885107 + processed_pseudogene KNOWN OTTHUMG00000160919.2 445 445 1 ENSG00000226804.4 RP4-675G8.3 chr1 44150594 44151753 - processed_pseudogene KNOWN OTTHUMG00000007490.3 1160 1160 1 ENSG00000250908.1 RP11-703C10.1 chr4 93318623 93319786 - antisense NOVEL OTTHUMG00000160920.2 1164 441 2 ENSG00000252342.1 RNA5SP164 chr4 93820171 93820280 + rRNA KNOWN NA 110 110 1 ENSG00000172238.4 ATOH1 chr4 93828753 93830964 + protein_coding KNOWN OTTHUMG00000130972.1 2212 2212 1 ENSG00000246541.2 RP11-363G15.2 chr4 94117792 94207556 - lincRNA NOVEL OTTHUMG00000161244.2 89765 1042 9 ENSG00000250897.2 HMGB3P15 chr4 94195940 94196513 - processed_pseudogene KNOWN OTTHUMG00000160930.2 574 574 1 ENSG00000163104.16 SMARCAD1 chr4 94207611 94291292 + protein_coding KNOWN OTTHUMG00000130971.12 83682 6313 137 ENSG00000163106.9 HPGDS chr4 94298535 94342876 - protein_coding KNOWN OTTHUMG00000130974.4 44342 2111 13 ENSG00000241103.1 RP11-398J16.1 chr4 94369833 94370163 + processed_pseudogene KNOWN OTTHUMG00000157522.1 331 331 1 ENSG00000279272.1 AC109925.1 chr4 94450651 94450892 - pseudogene NOVEL NA 242 237 2 ENSG00000163110.13 PDLIM5 chr4 94451857 94668227 + protein_coding KNOWN OTTHUMG00000130973.9 216371 11090 186 ENSG00000200171.1 Y_RNA chr1 44153385 44153480 - misc_RNA NOVEL NA 96 96 1 ENSG00000249951.1 RP11-554D13.1 chr4 94675245 94702570 + lincRNA NOVEL OTTHUMG00000161245.2 27326 215 2 ENSG00000249599.1 BMPR1B-AS1 chr4 94743800 94757533 - lincRNA NOVEL OTTHUMG00000161193.2 13734 511 3 ENSG00000138696.9 BMPR1B chr4 94757968 95158448 + protein_coding KNOWN OTTHUMG00000130991.4 400481 6312 76 ENSG00000182168.13 UNC5C chr4 95162504 95549206 - protein_coding KNOWN OTTHUMG00000130989.3 386703 10685 62 ENSG00000271474.1 RP11-710C12.1 chr4 95549129 95552457 + antisense NOVEL OTTHUMG00000185100.1 3329 3329 1 ENSG00000242936.1 RPL30P6 chr4 95644952 95645293 - processed_pseudogene KNOWN OTTHUMG00000157526.1 342 342 1 ENSG00000163114.5 PDHA2 chr4 95840019 95841474 + protein_coding KNOWN OTTHUMG00000130990.1 1456 1456 1 ENSG00000200622.1 RNU6-1059P chr4 95868667 95868764 - snRNA KNOWN NA 98 98 1 ENSG00000201744.1 RNU6-34P chr4 96152297 96152403 - snRNA KNOWN NA 107 107 1 ENSG00000250655.1 RP11-61G24.1 chr4 96212279 96213100 + processed_pseudogene KNOWN OTTHUMG00000160944.1 822 822 1 ENSG00000269737.1 RP11-345P4.7 chr1 1671990 1673411 + antisense NOVEL OTTHUMG00000182604.1 1422 1422 1 ENSG00000238037.1 OOSP1P1 chr1 44155028 44155301 - processed_pseudogene KNOWN OTTHUMG00000007491.2 274 274 1 ENSG00000248510.2 RP11-145G20.1 chr4 96310701 96818864 + lincRNA NOVEL OTTHUMG00000161181.2 508164 2423 6 ENSG00000201640.2 RN7SKP28 chr4 96348734 96349038 - misc_RNA KNOWN NA 305 305 1 ENSG00000236764.4 COX7A2P2 chr4 96902801 96903050 + processed_pseudogene KNOWN OTTHUMG00000160945.2 250 250 1 ENSG00000253170.1 RP11-431J17.1 chr4 97120701 97135059 + lincRNA NOVEL OTTHUMG00000164937.1 14359 525 2 ENSG00000163116.8 STPG2 chr4 97184093 98143240 - protein_coding KNOWN OTTHUMG00000131009.3 959148 5836 21 ENSG00000254044.4 RP11-681L8.1 chr4 97334635 97633823 - sense_overlapping NOVEL OTTHUMG00000164938.1 299189 770 8 ENSG00000251620.1 STPG2-AS1 chr4 97366926 97490164 + antisense NOVEL OTTHUMG00000161180.1 123239 537 6 ENSG00000250293.1 CRYZP2 chr4 97916353 97917401 - processed_pseudogene KNOWN OTTHUMG00000161185.1 1049 1049 1 ENSG00000242697.2 RPL5P12 chr4 98025390 98026240 + processed_pseudogene KNOWN OTTHUMG00000157528.2 851 851 1 ENSG00000214904.5 DUTP8 chr4 98048555 98049043 + processed_pseudogene KNOWN OTTHUMG00000160959.3 489 489 1 ENSG00000227994.1 RP5-891H21.1 chr1 44172506 44172719 - processed_pseudogene KNOWN OTTHUMG00000007576.2 214 214 1 ENSG00000214559.3 RP11-323J4.1 chr4 98251688 98261630 - antisense NOVEL OTTHUMG00000160986.1 9943 397 2 ENSG00000138698.13 RAP1GDS1 chr4 98261384 98443861 + protein_coding KNOWN OTTHUMG00000160987.11 182478 5424 161 ENSG00000242318.1 RP11-810D13.1 chr4 98409290 98409763 + processed_pseudogene KNOWN OTTHUMG00000157532.1 474 474 1 ENSG00000168785.6 TSPAN5 chr4 98470367 98658629 - protein_coding KNOWN OTTHUMG00000131008.3 188263 7430 59 ENSG00000251523.1 RP11-724M22.1 chr4 98496364 98509935 + antisense NOVEL OTTHUMG00000161091.1 13572 489 4 ENSG00000260641.1 RP11-1299A16.3 chr4 98658904 98664550 + antisense NOVEL OTTHUMG00000175889.1 5647 5647 1 ENSG00000249764.1 RP11-1299A16.1 chr4 98713804 98713971 - processed_pseudogene KNOWN OTTHUMG00000161087.1 168 168 1 ENSG00000227118.3 BTF3P13 chr4 98740742 98741231 + processed_pseudogene KNOWN OTTHUMG00000161089.1 490 490 1 ENSG00000151247.11 EIF4E chr4 98871684 98930637 - protein_coding KNOWN OTTHUMG00000161090.2 58954 14067 59 ENSG00000249055.1 TBCAP3 chr4 98909537 98909848 - transcribed_processed_pseudogene KNOWN OTTHUMG00000161088.1 312 312 1 ENSG00000271329.1 RP5-891H21.5 chr1 44187943 44189049 - processed_pseudogene KNOWN OTTHUMG00000184286.2 1107 796 2 ENSG00000263923.1 RP11-571L19.7 chr4 98928897 98994994 + antisense NOVEL OTTHUMG00000178393.1 66098 622 5 ENSG00000238449.2 AC019131.1 chr4 98929914 98929993 - miRNA NOVEL NA 80 80 1 ENSG00000214886.4 FAM177A1P1 chr4 98955982 98956767 + processed_pseudogene KNOWN OTTHUMG00000161228.2 786 473 2 ENSG00000252548.1 RNU7-149P chr4 98966815 98966873 - snRNA KNOWN NA 59 59 1 ENSG00000251437.1 NDUFS5P4 chr4 98976800 98977117 - processed_pseudogene KNOWN OTTHUMG00000161233.1 318 318 1 ENSG00000164024.10 METAP1 chr4 98995620 99062813 + protein_coding KNOWN OTTHUMG00000161231.2 67194 4117 74 ENSG00000265213.1 MIR3684 chr4 98997387 98997460 + miRNA KNOWN NA 74 74 1 ENSG00000250496.2 ABT1P1 chr4 99022311 99023131 - processed_pseudogene KNOWN OTTHUMG00000161229.2 821 821 1 ENSG00000272777.1 RP11-571L19.8 chr4 99067256 99068125 - lincRNA NOVEL OTTHUMG00000186323.1 870 870 1 ENSG00000197894.9 ADH5 chr4 99070978 99088801 - protein_coding KNOWN OTTHUMG00000161230.10 17824 4866 73 ENSG00000178028.12 DMAP1 chr1 44213455 44220681 + protein_coding KNOWN OTTHUMG00000007577.3 7227 5599 97 ENSG00000246090.5 RP11-696N14.1 chr4 99088857 99301356 + antisense NOVEL OTTHUMG00000161232.2 212500 7021 37 ENSG00000198099.7 ADH4 chr4 99123657 99157792 - protein_coding KNOWN OTTHUMG00000161227.2 34136 2453 83 ENSG00000249065.2 PCNAP1 chr4 99160514 99161645 - transcribed_processed_pseudogene KNOWN OTTHUMG00000161312.2 1132 1132 2 ENSG00000172955.16 ADH6 chr4 99202638 99219537 - protein_coding KNOWN OTTHUMG00000131024.8 16900 4401 44 ENSG00000187758.6 ADH1A chr4 99276367 99291028 - protein_coding KNOWN OTTHUMG00000131026.3 14662 2258 18 ENSG00000196616.11 ADH1B chr4 99304964 99321442 - protein_coding KNOWN OTTHUMG00000161413.2 16479 6524 50 ENSG00000248144.4 ADH1C chr4 99336492 99353027 - protein_coding KNOWN OTTHUMG00000161422.5 16536 1860 26 ENSG00000196344.10 ADH7 chr4 99412261 99435737 - protein_coding KNOWN OTTHUMG00000159318.2 23477 3108 44 ENSG00000250300.1 RP11-696N14.3 chr4 99469598 99498698 - unprocessed_pseudogene KNOWN OTTHUMG00000161520.1 29101 658 4 ENSG00000138813.8 C4orf17 chr4 99511004 99542303 + protein_coding KNOWN OTTHUMG00000131027.3 31300 3261 31 ENSG00000117419.13 ERI3 chr1 44221070 44355260 - protein_coding KNOWN OTTHUMG00000007637.3 134191 2642 50 ENSG00000145331.12 TRMT10A chr4 99546709 99564032 - protein_coding KNOWN OTTHUMG00000131025.3 17324 4379 41 ENSG00000138823.11 MTTP chr4 99563761 99623999 + protein_coding KNOWN OTTHUMG00000131023.4 60239 5398 105 ENSG00000248676.1 RP11-766F14.1 chr4 99594799 99625913 - antisense NOVEL OTTHUMG00000161582.1 31115 359 4 ENSG00000248713.1 RP11-766F14.2 chr4 99636529 99654648 - protein_coding KNOWN OTTHUMG00000161583.1 18120 10086 2 ENSG00000070190.11 DAPP1 chr4 99816833 99870154 + protein_coding KNOWN OTTHUMG00000160974.2 53322 4548 27 ENSG00000279913.1 AP001962.3 chr4 99844138 99844696 + TEC KNOWN OTTHUMG00000161551.1 559 559 1 ENSG00000109270.11 LAMTOR3 chr4 99878336 99894490 - protein_coding KNOWN OTTHUMG00000131050.3 16155 4226 20 ENSG00000164031.15 DNAJB14 chr4 99896248 99946726 - protein_coding KNOWN OTTHUMG00000131049.4 50479 13078 64 ENSG00000279098.1 RP11-15B17.4 chr4 99942081 99942522 - TEC KNOWN OTTHUMG00000161550.1 442 442 1 ENSG00000164032.10 H2AFZ chr4 99948086 99950388 - protein_coding KNOWN OTTHUMG00000131048.4 2303 2303 22 ENSG00000233602.1 ERI3-IT1 chr1 44243408 44244273 - sense_intronic NOVEL OTTHUMG00000037293.1 866 619 2 ENSG00000245322.5 RP11-15B17.1 chr4 99950006 100195099 + antisense NOVEL OTTHUMG00000161022.2 245094 1714 17 ENSG00000250403.1 RP11-15B17.2 chr4 99990737 99991477 - processed_pseudogene KNOWN OTTHUMG00000161021.1 741 741 1 ENSG00000248820.2 DYNLL1P6 chr4 100041841 100042104 - processed_pseudogene KNOWN OTTHUMG00000161020.2 264 264 1 ENSG00000222196.2 AC121157.1 chr4 100129945 100130035 - miRNA NOVEL NA 91 91 1 ENSG00000145358.5 DDIT4L chr4 100185870 100190782 - protein_coding KNOWN OTTHUMG00000161019.1 4913 2994 8 ENSG00000249710.1 RP11-588P8.1 chr4 100190033 100215505 + antisense NOVEL OTTHUMG00000161023.1 25473 526 5 ENSG00000164035.8 EMCN chr4 100395341 100880126 - protein_coding KNOWN OTTHUMG00000131051.5 484786 5243 66 ENSG00000250223.1 LINC01216 chr4 100660279 100675113 - sense_intronic NOVEL OTTHUMG00000161053.2 14835 824 4 ENSG00000251219.1 LINC01217 chr4 100778582 100791235 - sense_intronic NOVEL OTTHUMG00000161750.1 12654 562 2 ENSG00000251636.1 LINC01218 chr4 100812255 100814280 - sense_intronic NOVEL OTTHUMG00000161011.1 2026 481 2 ENSG00000252146.1 AL390776.1 chr1 44333105 44333178 - miRNA NOVEL NA 74 74 1 ENSG00000138814.15 PPP3CA chr4 101023409 101348278 - protein_coding KNOWN OTTHUMG00000133839.6 324870 5213 83 ENSG00000273882.1 MIR8066 chr4 101240795 101240872 - miRNA KNOWN NA 78 78 1 ENSG00000221265.1 MIR1255A chr4 101330302 101330414 - miRNA KNOWN NA 113 113 1 ENSG00000254531.1 FLJ20021 chr4 101347780 101348883 + lincRNA NOVEL OTTHUMG00000166283.1 1104 790 4 ENSG00000153064.10 BANK1 chr4 101411286 102074812 + protein_coding KNOWN OTTHUMG00000160958.2 663527 6144 100 ENSG00000199529.1 RNU6-462P chr4 101723876 101723980 + snRNA KNOWN NA 105 105 1 ENSG00000251149.1 MTND5P5 chr4 101972423 101972798 + processed_pseudogene KNOWN OTTHUMG00000160965.1 376 376 1 ENSG00000251309.1 RP11-498M5.2 chr4 101976894 102036903 - antisense NOVEL OTTHUMG00000160964.1 60010 603 3 ENSG00000275124.1 AP002022.1 chr4 102158943 102159050 + miRNA NOVEL NA 108 108 1 ENSG00000138821.11 SLC39A8 chr4 102251041 102431258 - protein_coding KNOWN OTTHUMG00000131120.2 180218 6480 47 ENSG00000199385.1 RNU6-369P chr1 44390722 44390823 + snRNA KNOWN NA 102 102 1 ENSG00000241144.3 RN7SL728P chr4 102348392 102348691 - misc_RNA KNOWN NA 300 300 1 ENSG00000248161.4 RP11-499E18.1 chr4 102418602 102450010 - lincRNA NOVEL OTTHUMG00000131122.10 31409 992 13 ENSG00000251572.2 AF213884.1 chr4 102461250 102462152 + processed_pseudogene KNOWN OTTHUMG00000161013.2 903 903 1 ENSG00000260651.1 AF213884.2 chr4 102500841 102501319 - antisense NOVEL OTTHUMG00000176287.1 479 479 1 ENSG00000109320.10 NFKB1 chr4 102501329 102617302 + protein_coding KNOWN OTTHUMG00000161080.6 115974 6257 131 ENSG00000238553.1 AF213884.3 chr4 102565875 102565967 - miRNA NOVEL NA 93 93 1 ENSG00000109323.7 MANBA chr4 102631488 102760994 - protein_coding KNOWN OTTHUMG00000131123.4 129507 8437 61 ENSG00000241981.2 AF224669.3 chr4 102662611 102663073 + processed_pseudogene KNOWN OTTHUMG00000157533.2 463 463 1 ENSG00000230069.3 LRRC37A15P chr4 102727274 102730721 - processed_pseudogene KNOWN OTTHUMG00000161081.1 3448 1355 2 ENSG00000248971.2 KRT8P46 chr4 102728746 102730171 - processed_pseudogene KNOWN OTTHUMG00000161079.2 1426 1426 1 ENSG00000187147.16 RNF220 chr1 44405194 44651724 + protein_coding KNOWN OTTHUMG00000007697.6 246531 9687 138 ENSG00000224207.3 RP11-10L12.1 chr4 102734358 102734612 + processed_pseudogene KNOWN OTTHUMG00000161012.1 255 255 1 ENSG00000251288.2 RP11-10L12.2 chr4 102751401 102752641 + processed_pseudogene KNOWN OTTHUMG00000161017.2 1241 1241 1 ENSG00000109332.18 UBE2D3 chr4 102794383 102868896 - protein_coding KNOWN OTTHUMG00000131119.15 74514 10069 219 ENSG00000246560.2 RP11-10L12.4 chr4 102828055 102844075 + antisense NOVEL OTTHUMG00000161016.1 16021 883 2 ENSG00000252739.1 RNU7-151P chr4 102837047 102837099 - snRNA KNOWN NA 53 53 1 ENSG00000145354.8 CISD2 chr4 102868978 102889242 + protein_coding KNOWN OTTHUMG00000161014.3 20265 2607 10 ENSG00000164037.15 SLC9B1 chr4 102885048 103019739 - protein_coding KNOWN OTTHUMG00000161114.2 134692 2977 79 ENSG00000250651.1 PABPC1P7 chr4 102896725 102898237 + processed_pseudogene KNOWN OTTHUMG00000161018.1 1513 1513 1 ENSG00000276978.1 AC083826.1 chr4 102898565 102898621 + miRNA NOVEL NA 57 57 1 ENSG00000249283.3 ACTR3BP4 chr4 102961956 102963327 + processed_pseudogene KNOWN OTTHUMG00000161015.1 1372 1244 2 ENSG00000263381.1 MIR5584 chr1 44545493 44545552 + miRNA KNOWN NA 60 60 1 ENSG00000164038.13 SLC9B2 chr4 103019868 103085829 - protein_coding KNOWN OTTHUMG00000131125.4 65962 5374 77 ENSG00000164039.13 BDH2 chr4 103079435 103099883 - protein_coding KNOWN OTTHUMG00000074039.4 20449 3383 69 ENSG00000138778.10 CENPE chr4 103105806 103198409 - protein_coding KNOWN OTTHUMG00000160980.4 92604 9444 188 ENSG00000248740.4 RP11-328K4.1 chr4 103256159 103453658 + lincRNA NOVEL OTTHUMG00000160989.1 197500 923 12 ENSG00000251577.4 RP11-297P16.3 chr4 103548745 103624534 + antisense NOVEL OTTHUMG00000160991.2 75790 927 10 ENSG00000250920.1 RP11-297P16.4 chr4 103550927 103559127 - lincRNA NOVEL OTTHUMG00000160990.2 8201 830 4 ENSG00000251571.1 DDX3P3 chr4 103572089 103574082 + processed_pseudogene KNOWN OTTHUMG00000160979.2 1994 1994 1 ENSG00000169836.4 TACR3 chr4 103586031 103719816 - protein_coding KNOWN OTTHUMG00000131124.1 133786 5190 5 ENSG00000252460.1 RNU6-635P chr4 103924540 103924641 + snRNA KNOWN NA 102 102 1 ENSG00000249614.1 RP11-703G6.1 chr4 103961616 104036923 + lincRNA NOVEL OTTHUMG00000161751.1 75308 812 4 ENSG00000269227.1 RP11-345P4.6 chr1 1673275 1674397 + transcribed_processed_pseudogene KNOWN OTTHUMG00000182605.1 1123 502 2 ENSG00000126106.12 TMEM53 chr1 44635238 44674555 - protein_coding KNOWN OTTHUMG00000007833.1 39318 3635 27 ENSG00000251170.4 RP11-729M20.1 chr4 104230380 104411035 + lincRNA NOVEL OTTHUMG00000160975.1 180656 995 10 ENSG00000215999.2 AC004052.1 chr4 104278107 104278191 - miRNA NOVEL NA 85 85 1 ENSG00000168772.10 CXXC4 chr4 104468312 104494901 - protein_coding KNOWN OTTHUMG00000131121.3 26590 5819 8 ENSG00000272082.1 AC093628.1 chr4 104490876 104490954 + miRNA NOVEL NA 79 79 1 ENSG00000245384.1 AC004053.1 chr4 104490965 104697592 + antisense NOVEL OTTHUMG00000160977.1 206628 2968 10 ENSG00000250670.1 AC004063.1 chr4 104556960 104568877 + lincRNA NOVEL OTTHUMG00000160976.2 11918 547 4 ENSG00000248242.1 RP11-556I14.2 chr4 104653874 104966793 - lincRNA NOVEL OTTHUMG00000161052.1 312920 575 6 ENSG00000276215.1 AC004053.2 chr4 104796128 104796221 + miRNA NOVEL NA 94 94 1 ENSG00000244470.2 RP11-395M19.1 chr4 104886118 104886955 - processed_pseudogene KNOWN OTTHUMG00000157534.2 838 838 1 ENSG00000248373.4 RP11-556I14.1 chr4 104907357 105120000 + lincRNA NOVEL OTTHUMG00000161051.1 212644 1038 12 ENSG00000198520.9 C1orf228 chr1 44674692 44725591 + protein_coding KNOWN OTTHUMG00000007834.5 50900 3166 107 ENSG00000251906.2 RNU6-351P chr4 104974672 104974771 + snRNA KNOWN NA 100 100 1 ENSG00000276992.1 RP11-556I14.3 chr4 104996900 104997052 - processed_pseudogene KNOWN OTTHUMG00000187580.1 153 153 1 ENSG00000251473.2 AC004069.1 chr4 105102891 105104004 - processed_pseudogene KNOWN OTTHUMG00000160995.2 1114 1114 1 ENSG00000252136.1 SNORA31 chr4 105105987 105106094 + snoRNA NOVEL NA 108 108 1 ENSG00000251259.1 AC004069.2 chr4 105137280 105140619 - lincRNA NOVEL OTTHUMG00000160994.2 3340 549 2 ENSG00000168769.11 TET2 chr4 105145875 105279816 + protein_coding KNOWN OTTHUMG00000131213.2 133942 16474 61 ENSG00000251586.1 TET2-AS1 chr4 105171354 105178063 - antisense NOVEL OTTHUMG00000160996.1 6710 537 5 ENSG00000243383.3 RN7SL89P chr4 105293664 105293946 + misc_RNA KNOWN NA 283 283 1 ENSG00000138777.18 PPA2 chr4 105369077 105474081 - protein_coding KNOWN OTTHUMG00000128781.10 105005 4654 155 ENSG00000200917.1 RNU6-553P chr4 105406997 105407092 + snRNA KNOWN NA 96 96 1 ENSG00000199377.1 RNU5F-1 chr1 44721786 44721902 - snRNA KNOWN NA 117 117 1 ENSG00000249264.1 EEF1A1P9 chr4 105484698 105486080 + processed_pseudogene KNOWN OTTHUMG00000161040.1 1383 1383 1 ENSG00000216425.4 AC004066.2 chr4 105526596 105527397 - processed_pseudogene KNOWN OTTHUMG00000161045.1 802 802 1 ENSG00000250922.1 ATP5EP1 chr4 105532475 105532630 + processed_pseudogene KNOWN OTTHUMG00000161055.1 156 156 1 ENSG00000250522.1 AC004066.3 chr4 105540190 105552355 - antisense NOVEL OTTHUMG00000161046.1 12166 572 4 ENSG00000236699.7 ARHGEF38 chr4 105552620 105708093 + protein_coding KNOWN OTTHUMG00000154752.5 155474 7579 46 ENSG00000249885.1 ARHGEF38-IT1 chr4 105561591 105570238 + sense_intronic NOVEL OTTHUMG00000161056.1 8648 456 3 ENSG00000248778.1 RP11-311D14.1 chr4 105679050 105680094 - processed_pseudogene KNOWN OTTHUMG00000161078.1 1045 1045 1 ENSG00000138785.13 INTS12 chr4 105682627 105895986 - protein_coding KNOWN OTTHUMG00000131215.6 213360 3897 56 ENSG00000138780.13 GSTCD chr4 105708778 105847728 + protein_coding KNOWN OTTHUMG00000131211.5 138951 6295 80 ENSG00000251175.4 RP11-45L9.1 chr4 105746245 105827172 - antisense NOVEL OTTHUMG00000161179.1 80928 826 14 ENSG00000200169.1 RNU5D-1 chr1 44731055 44731170 - snRNA KNOWN NA 116 116 1 ENSG00000168743.11 NPNT chr4 105894775 106004027 + protein_coding KNOWN OTTHUMG00000161189.2 109253 6117 127 ENSG00000250740.1 RP11-710F7.2 chr4 105927060 105932722 - antisense NOVEL OTTHUMG00000161212.1 5663 584 4 ENSG00000249635.1 RP11-710F7.3 chr4 106003317 106022478 - antisense NOVEL OTTHUMG00000161211.1 19162 3526 4 ENSG00000145348.15 TBCK chr4 106041599 106321495 - protein_coding KNOWN OTTHUMG00000131214.6 279897 11112 240 ENSG00000164022.15 AIMP1 chr4 106315544 106349226 + protein_coding KNOWN OTTHUMG00000131217.4 33683 3328 26 ENSG00000250298.1 GIMD1 chr4 106358398 106367202 - lincRNA NOVEL OTTHUMG00000161071.2 8805 206 2 ENSG00000222333.1 AC093680.1 chr4 106415706 106415785 - miRNA NOVEL NA 80 80 1 ENSG00000249613.1 RP13-612N21.1 chr4 106433624 106453448 + lincRNA NOVEL OTTHUMG00000160992.1 19825 521 4 ENSG00000248915.2 ACTR6P1 chr4 106836498 106837601 - processed_pseudogene KNOWN OTTHUMG00000160993.2 1104 1104 1 ENSG00000155011.7 DKK2 chr4 106921802 107283806 - protein_coding KNOWN OTTHUMG00000131216.6 362005 4319 18 ENSG00000142945.11 KIF2C chr1 44739818 44767767 + protein_coding KNOWN OTTHUMG00000008416.5 27950 3646 85 ENSG00000213522.4 RAC1P5 chr4 107203349 107203924 - processed_pseudogene KNOWN OTTHUMG00000161008.2 576 576 1 ENSG00000251081.1 RP11-713M6.2 chr4 107258700 107301870 + lincRNA NOVEL OTTHUMG00000161304.1 43171 557 2 ENSG00000252470.1 RNU6-551P chr4 107435118 107435220 + snRNA KNOWN NA 103 103 1 ENSG00000138801.7 PAPSS1 chr4 107590276 107720452 - protein_coding KNOWN OTTHUMG00000131210.3 130177 3478 40 ENSG00000164023.13 SGMS2 chr4 107824563 107915047 + protein_coding KNOWN OTTHUMG00000131811.4 90485 7635 36 ENSG00000245293.2 RP11-286E11.1 chr4 107863479 107978799 - antisense NOVEL OTTHUMG00000161085.2 115321 3099 12 ENSG00000222691.1 RNU6-733P chr4 107867807 107867910 - snRNA KNOWN NA 104 104 1 ENSG00000155016.16 CYP2U1 chr4 107931369 107953457 + protein_coding KNOWN OTTHUMG00000161084.2 22089 6096 14 ENSG00000249604.1 RP11-286E11.2 chr4 107936031 107941255 - antisense NOVEL OTTHUMG00000161086.1 5225 3147 4 ENSG00000138796.14 HADH chr4 107989714 108035175 + protein_coding KNOWN OTTHUMG00000131810.4 45462 3055 59 ENSG00000225721.4 RP11-269F19.2 chr1 44759037 44775810 - antisense NOVEL OTTHUMG00000008489.1 16774 765 6 ENSG00000138795.8 LEF1 chr4 108047545 108168956 - protein_coding KNOWN OTTHUMG00000131809.5 121412 5361 150 ENSG00000232021.5 LEF1-AS1 chr4 108167525 108256836 + processed_transcript NOVEL OTTHUMG00000161028.1 89312 4799 18 ENSG00000239939.1 RPSAP34 chr4 108407843 108408578 - processed_pseudogene KNOWN OTTHUMG00000157535.1 736 736 1 ENSG00000278589.1 AC005510.3 chr4 108415220 108416639 + unprocessed_pseudogene KNOWN OTTHUMG00000187581.1 1420 710 4 ENSG00000250485.1 EXOC7P1 chr4 108417705 108419763 - processed_pseudogene KNOWN OTTHUMG00000161029.1 2059 2059 1 ENSG00000234492.4 RPL34-AS1 chr4 108538190 108620460 - lincRNA NOVEL OTTHUMG00000161030.2 82271 4570 15 ENSG00000109475.15 RPL34 chr4 108620566 108630412 + protein_coding KNOWN OTTHUMG00000131839.3 9847 3393 32 ENSG00000198856.11 OSTC chr4 108650584 108667820 + protein_coding KNOWN OTTHUMG00000161031.2 17237 1617 16 ENSG00000206601.1 RNU6-431P chr4 108652150 108652256 + snRNA KNOWN NA 107 107 1 ENSG00000164089.7 ETNPPL chr4 108742040 108763054 - protein_coding KNOWN OTTHUMG00000161036.1 21015 2950 74 ENSG00000142937.10 RPS8 chr1 44775251 44778779 + protein_coding KNOWN OTTHUMG00000008494.1 3529 2847 32 ENSG00000249257.1 RP11-75N20.2 chr4 108773613 108774020 + processed_pseudogene KNOWN OTTHUMG00000161037.1 408 408 1 ENSG00000250185.2 RCC2P8 chr4 108788745 108789779 - processed_pseudogene KNOWN OTTHUMG00000161039.2 1035 1035 1 ENSG00000265522.1 AC097473.1 chr4 108789200 108789262 - miRNA NOVEL NA 63 63 1 ENSG00000188517.13 COL25A1 chr4 108810721 109302657 - protein_coding KNOWN OTTHUMG00000150039.3 491937 6653 223 ENSG00000277189.1 AC073427.1 chr4 109016698 109016782 + miRNA NOVEL NA 85 85 1 ENSG00000246774.1 AC004051.2 chr4 109303035 109316135 + lincRNA NOVEL OTTHUMG00000161047.1 13101 1951 3 ENSG00000249465.1 RBMXP4 chr4 109346326 109347459 - processed_pseudogene KNOWN OTTHUMG00000161038.1 1134 1134 1 ENSG00000247950.5 SEC24B-AS1 chr4 109347475 109433817 - antisense NOVEL OTTHUMG00000161048.2 86343 2584 25 ENSG00000138802.10 SEC24B chr4 109433772 109540896 + protein_coding KNOWN OTTHUMG00000161372.3 107125 5219 72 ENSG00000243227.3 RN7SL55P chr4 109450772 109451068 - misc_RNA KNOWN NA 297 297 1 ENSG00000264294.1 SNORD55 chr1 44775864 44775943 + snoRNA KNOWN NA 80 80 1 ENSG00000207988.1 MIR576 chr4 109488698 109488795 + miRNA KNOWN NA 98 98 1 ENSG00000225094.3 SETP20 chr4 109553243 109554094 - processed_pseudogene KNOWN OTTHUMG00000161100.2 852 852 1 ENSG00000249965.2 CDC42P4 chr4 109555170 109555732 + processed_pseudogene KNOWN OTTHUMG00000161101.2 563 563 1 ENSG00000005059.14 CCDC109B chr4 109560205 109688726 + protein_coding KNOWN OTTHUMG00000161103.2 128522 3566 24 ENSG00000248785.1 HIGD1AP14 chr4 109673843 109674124 + processed_pseudogene KNOWN OTTHUMG00000161106.1 282 282 1 ENSG00000138794.8 CASP6 chr4 109688622 109703583 - protein_coding KNOWN OTTHUMG00000131914.3 14962 1943 34 ENSG00000273447.1 AC004067.5 chr4 109692004 109692703 + antisense NOVEL OTTHUMG00000186339.1 700 700 1 ENSG00000123739.9 PLA2G12A chr4 109709989 109730077 - protein_coding KNOWN OTTHUMG00000131915.3 20089 5228 13 ENSG00000205403.11 CFI chr4 109740694 109802179 - protein_coding KNOWN OTTHUMG00000161109.5 61486 3875 64 ENSG00000272795.1 RP11-602N24.3 chr4 109815047 109815410 - lincRNA NOVEL OTTHUMG00000186340.1 364 364 1 ENSG00000200913.1 SNORD46 chr1 44776490 44776593 + snoRNA KNOWN NA 104 104 1 ENSG00000109534.15 GAR1 chr4 109815510 109824740 + protein_coding KNOWN OTTHUMG00000161108.5 9231 2046 23 ENSG00000180245.4 RRH chr4 109827994 109844604 + protein_coding KNOWN OTTHUMG00000132045.1 16611 1455 7 ENSG00000183423.10 LRIT3 chr4 109848202 109872315 + protein_coding KNOWN OTTHUMG00000132043.3 24114 3897 8 ENSG00000249681.2 KRT19P3 chr4 109879070 109879897 - processed_pseudogene KNOWN OTTHUMG00000161105.2 828 828 1 ENSG00000138798.10 EGF chr4 109912884 110012266 + protein_coding KNOWN OTTHUMG00000132044.5 99383 6127 100 ENSG00000207260.1 RNU6-35P chr4 109992325 109992431 + snRNA KNOWN NA 107 107 1 ENSG00000170522.8 ELOVL6 chr4 110045846 110199199 - protein_coding KNOWN OTTHUMG00000132547.5 153354 7297 32 ENSG00000263940.2 RN7SL275P chr4 110117736 110118070 + misc_RNA KNOWN NA 335 335 1 ENSG00000248200.2 RP11-115A14.1 chr4 110146374 110147248 + processed_pseudogene KNOWN OTTHUMG00000161102.2 875 571 2 ENSG00000166530.8 HSBP1P2 chr4 110251871 110252099 - processed_pseudogene KNOWN OTTHUMG00000161107.2 229 229 1 ENSG00000202031.1 SNORD38A chr1 44777843 44777912 + snoRNA KNOWN NA 70 70 1 ENSG00000250594.2 RP11-433B3.1 chr4 110264865 110265017 - processed_pseudogene KNOWN OTTHUMG00000161104.2 153 153 1 ENSG00000212160.1 RNU6-205P chr4 110278185 110278291 + snRNA KNOWN NA 107 107 1 ENSG00000250304.2 ZBED1P1 chr4 110291644 110293573 + processed_pseudogene KNOWN OTTHUMG00000161111.2 1930 1930 1 ENSG00000276369.1 AC005187.1 chr4 110298484 110298550 + miRNA NOVEL NA 67 67 1 ENSG00000138792.8 ENPEP chr4 110365733 110565285 + protein_coding KNOWN OTTHUMG00000132546.3 199553 7802 39 ENSG00000251464.2 RPL7L1P13 chr4 110399773 110400511 - processed_pseudogene KNOWN OTTHUMG00000161110.2 739 739 1 ENSG00000251046.2 ZNF969P chr4 110415898 110418504 + processed_pseudogene KNOWN OTTHUMG00000161373.3 2607 2341 2 ENSG00000199894.1 snoU2_19 chr4 110433109 110433188 - snoRNA NOVEL NA 80 80 1 ENSG00000250511.1 RP11-380D23.1 chr4 110512488 110519505 - antisense NOVEL OTTHUMG00000161116.2 7018 1447 4 ENSG00000250103.2 RP11-380D23.2 chr4 110595513 110615458 - lincRNA NOVEL OTTHUMG00000161118.2 19946 832 6 ENSG00000215914.4 MMP23A chr1 1699942 1701782 + unprocessed_pseudogene KNOWN OTTHUMG00000000585.6 1841 1017 7 ENSG00000281859.1 SNORD38B chr1 44778390 44778458 + snoRNA KNOWN NA 69 69 1 ENSG00000164093.14 PITX2 chr4 110617423 110642123 - protein_coding KNOWN OTTHUMG00000132837.5 24701 5629 53 ENSG00000249519.1 LINC01438 chr4 110794403 110797344 + lincRNA NOVEL OTTHUMG00000161115.1 2942 556 2 ENSG00000251808.1 AC024198.1 chr4 110853376 110853470 - miRNA NOVEL NA 95 95 1 ENSG00000215961.1 MIR297 chr4 110860582 110860647 - miRNA KNOWN NA 66 66 1 ENSG00000251483.2 LYPLA1P2 chr4 110945109 110945799 - processed_pseudogene KNOWN OTTHUMG00000161117.2 691 691 1 ENSG00000251312.2 AC004062.2 chr4 111063583 111064227 + processed_pseudogene KNOWN OTTHUMG00000161119.2 645 645 1 ENSG00000200963.1 RNU6-289P chr4 111331412 111331518 + snRNA KNOWN NA 107 107 1 ENSG00000241722.2 RP11-255I10.1 chr4 111551854 111552173 + processed_pseudogene KNOWN OTTHUMG00000157541.2 320 320 1 ENSG00000248656.1 RP11-255I10.2 chr4 111640495 111648808 + lincRNA NOVEL OTTHUMG00000161125.1 8314 610 4 ENSG00000250855.1 RP11-269F21.1 chr4 111802801 111839886 + lincRNA NOVEL OTTHUMG00000161757.1 37086 481 3 ENSG00000207421.1 SNORD38B chr1 44778390 44778456 + snoRNA KNOWN NA 67 67 1 ENSG00000248432.1 RP11-269F21.2 chr4 111804418 111809694 - lincRNA NOVEL OTTHUMG00000161755.1 5277 300 2 ENSG00000249815.1 RP11-269F21.3 chr4 111826881 112072698 - lincRNA NOVEL OTTHUMG00000161756.1 245818 583 3 ENSG00000250556.1 CCDC34P1 chr4 112068010 112068526 + processed_pseudogene KNOWN OTTHUMG00000161050.1 517 517 1 ENSG00000250307.2 TUBB8P3 chr4 112077598 112078400 + processed_pseudogene KNOWN OTTHUMG00000161049.3 803 803 1 ENSG00000240459.2 RP11-477G18.1 chr4 112116510 112116903 - processed_pseudogene KNOWN OTTHUMG00000157543.2 394 394 1 ENSG00000174749.5 C4orf32 chr4 112145397 112195256 + protein_coding KNOWN OTTHUMG00000132851.2 49860 8901 2 ENSG00000243280.2 RP11-477G18.2 chr4 112171215 112171527 + processed_pseudogene KNOWN OTTHUMG00000157544.2 313 313 1 ENSG00000260526.1 RP11-73K9.2 chr4 112229561 112231596 - antisense NOVEL OTTHUMG00000176315.1 2036 2036 1 ENSG00000138660.10 AP1AR chr4 112231737 112270047 + protein_coding KNOWN OTTHUMG00000132849.2 38311 3444 34 ENSG00000272567.1 RP11-73K9.3 chr4 112272968 112273316 - lincRNA NOVEL OTTHUMG00000186344.1 349 349 1 ENSG00000234093.3 RPS15AP11 chr1 44780331 44780715 - processed_pseudogene KNOWN OTTHUMG00000008492.2 385 385 1 ENSG00000145365.10 TIFA chr4 112274542 112285903 - protein_coding KNOWN OTTHUMG00000161066.2 11362 4250 4 ENSG00000073331.16 ALPK1 chr4 112285509 112442620 + protein_coding KNOWN OTTHUMG00000132911.2 157112 12325 131 ENSG00000251441.2 RTEL1P1 chr4 112356135 112359819 + processed_pseudogene KNOWN OTTHUMG00000161065.3 3685 3685 1 ENSG00000248697.1 TOX4P1 chr4 112455924 112457785 + processed_pseudogene KNOWN OTTHUMG00000161064.1 1862 1862 1 ENSG00000178403.3 NEUROG2 chr4 112513516 112516172 - protein_coding KNOWN OTTHUMG00000132907.1 2657 2287 2 ENSG00000249509.1 RP11-402J6.1 chr4 112515385 112546881 + antisense NOVEL OTTHUMG00000161132.1 31497 952 6 ENSG00000248439.2 RP11-402J6.2 chr4 112530371 112530672 - processed_pseudogene KNOWN OTTHUMG00000161131.2 302 302 1 ENSG00000138658.14 ZGRF1 chr4 112539333 112636995 - protein_coding KNOWN OTTHUMG00000132908.3 97663 9103 155 ENSG00000250966.2 RP11-402J6.3 chr4 112564988 112565398 + processed_pseudogene KNOWN OTTHUMG00000161133.2 411 411 1 ENSG00000174720.14 LARP7 chr4 112636964 112657592 + protein_coding KNOWN OTTHUMG00000132909.4 20629 4083 100 ENSG00000142959.4 BEST4 chr1 44783585 44787705 - protein_coding KNOWN OTTHUMG00000008488.1 4121 2047 9 ENSG00000249532.3 RP11-148B6.1 chr4 112646476 112650051 - antisense NOVEL OTTHUMG00000161565.1 3576 743 8 ENSG00000199169.1 MIR367 chr4 112647874 112647941 - miRNA KNOWN NA 68 68 1 ENSG00000199145.1 MIR302D chr4 112648004 112648071 - miRNA KNOWN NA 68 68 1 ENSG00000207927.1 MIR302A chr4 112648183 112648251 - miRNA KNOWN NA 69 69 1 ENSG00000199102.1 MIR302C chr4 112648363 112648430 - miRNA KNOWN NA 68 68 1 ENSG00000274389.1 MIR302B chr4 112648485 112648557 - miRNA KNOWN NA 73 73 1 ENSG00000220924.4 OSTCP4 chr4 112685055 112685503 + processed_pseudogene KNOWN OTTHUMG00000161564.1 449 449 1 ENSG00000250046.3 RP11-148B6.2 chr4 112693047 112706810 - lincRNA NOVEL OTTHUMG00000161567.1 13764 740 2 ENSG00000248633.1 WRBP1 chr4 112693459 112693792 - transcribed_processed_pseudogene KNOWN OTTHUMG00000161560.1 334 334 1 ENSG00000241002.1 RP11-119H12.1 chr4 112738672 112739106 + processed_pseudogene KNOWN OTTHUMG00000157545.1 435 435 1 ENSG00000173846.11 PLK3 chr1 44800225 44805990 + protein_coding KNOWN OTTHUMG00000008491.2 5766 3479 51 ENSG00000202536.2 Y_RNA chr4 112755816 112755917 - misc_RNA NOVEL NA 102 102 1 ENSG00000241741.1 RPL7AP30 chr4 112788083 112788878 - processed_pseudogene KNOWN OTTHUMG00000157546.1 796 796 1 ENSG00000250500.1 RP11-119H12.3 chr4 112797050 112798691 - processed_pseudogene KNOWN OTTHUMG00000161568.1 1642 1352 2 ENSG00000145362.15 ANK2 chr4 112818109 113383740 + protein_coding KNOWN OTTHUMG00000132912.4 565632 18212 424 ENSG00000234841.4 RP11-119H12.4 chr4 112826307 112827607 + processed_pseudogene KNOWN OTTHUMG00000161569.2 1301 1301 1 ENSG00000251126.2 RP11-119H12.6 chr4 112880298 112882330 - antisense NOVEL OTTHUMG00000161563.2 2033 874 2 ENSG00000228814.4 RP11-119H12.5 chr4 112881718 112882132 - transcribed_processed_pseudogene KNOWN OTTHUMG00000161566.2 415 415 1 ENSG00000248152.1 RP11-650J17.1 chr4 112979590 113071962 - antisense NOVEL OTTHUMG00000161562.1 92373 1176 3 ENSG00000249373.2 RP11-650J17.2 chr4 113031287 113034551 - antisense NOVEL OTTHUMG00000161561.2 3265 427 3 ENSG00000275810.1 MIR8082 chr4 113152282 113152362 + miRNA KNOWN NA 81 81 1 ENSG00000188396.3 TCTEX1D4 chr1 44805913 44806675 - protein_coding NOVEL OTTHUMG00000008586.1 763 763 1 ENSG00000196656.7 AC004057.1 chr4 113214046 113217170 - transcribed_processed_pseudogene KNOWN OTTHUMG00000157547.2 3125 498 3 ENSG00000239279.3 RN7SL184P chr4 113419840 113420136 + misc_RNA KNOWN NA 297 297 1 ENSG00000206820.1 RNU1-138P chr4 113420323 113420486 + snRNA KNOWN NA 164 164 1 ENSG00000145349.15 CAMK2D chr4 113451032 113761927 - protein_coding KNOWN OTTHUMG00000132910.3 310896 7363 206 ENSG00000250229.1 RP11-397D21.1 chr4 113840050 113840236 + processed_pseudogene KNOWN OTTHUMG00000161096.1 187 155 2 ENSG00000180801.12 ARSJ chr4 113900284 113979727 - protein_coding KNOWN OTTHUMG00000161067.2 79444 5024 9 ENSG00000249304.1 RP11-26P13.2 chr4 113943256 113944320 + antisense NOVEL OTTHUMG00000161068.1 1065 441 2 ENSG00000248716.2 RP11-362M19.1 chr4 114103938 114104225 + processed_pseudogene KNOWN OTTHUMG00000161082.2 288 280 2 ENSG00000174607.9 UGT8 chr4 114598455 114678224 + protein_coding KNOWN OTTHUMG00000132915.2 79770 4699 14 ENSG00000207931.1 MIR577 chr4 114656759 114656854 + miRNA KNOWN NA 96 96 1 ENSG00000222009.7 BTBD19 chr1 44808482 44815585 + protein_coding KNOWN OTTHUMG00000008493.3 7104 3520 44 ENSG00000250215.1 CIR1P2 chr4 114713579 114714920 - processed_pseudogene KNOWN OTTHUMG00000161092.1 1342 1342 1 ENSG00000240637.3 RN7SL808P chr4 114799331 114799629 + misc_RNA KNOWN NA 299 299 1 ENSG00000138653.8 NDST4 chr4 114827763 115113876 - protein_coding KNOWN OTTHUMG00000132916.2 286114 3719 48 ENSG00000251308.1 MRPS33P3 chr4 115142982 115143303 + processed_pseudogene KNOWN OTTHUMG00000161076.1 322 322 1 ENSG00000250693.2 RPF2P2 chr4 115628812 115629707 + processed_pseudogene KNOWN OTTHUMG00000161072.2 896 896 1 ENSG00000248488.2 PGAM4P2 chr4 115764099 115764819 - processed_pseudogene KNOWN OTTHUMG00000160123.2 721 721 1 ENSG00000250363.1 KRT18P21 chr4 115920707 115921978 + processed_pseudogene KNOWN OTTHUMG00000161073.1 1272 1272 1 ENSG00000248173.4 RP11-659O3.1 chr4 115922015 116297160 - lincRNA NOVEL OTTHUMG00000161137.1 375146 840 6 ENSG00000250442.1 EIF3KP3 chr4 116043407 116044045 - processed_pseudogene KNOWN OTTHUMG00000161077.1 639 639 1 ENSG00000249259.2 RP11-166J5.1 chr4 116095110 116097066 - transcribed_processed_pseudogene KNOWN OTTHUMG00000161075.2 1957 1957 1 ENSG00000117425.12 PTCH2 chr1 44819844 44843063 - protein_coding KNOWN OTTHUMG00000008490.4 23220 5149 50 ENSG00000250627.2 TTC39CP1 chr4 116193997 116194751 - processed_pseudogene KNOWN OTTHUMG00000161074.2 755 755 1 ENSG00000270394.2 MTRNR2L13 chr4 116298876 116300320 + protein_coding KNOWN OTTHUMG00000184994.3 1445 1445 1 ENSG00000250272.1 TRMT112P1 chr4 116378919 116379269 + processed_pseudogene KNOWN OTTHUMG00000161139.1 351 351 1 ENSG00000248139.2 CUL4AP1 chr4 116425983 116430892 - processed_pseudogene KNOWN OTTHUMG00000161138.2 4910 1863 4 ENSG00000250791.1 RP11-55L3.1 chr4 116489364 116515146 - lincRNA NOVEL OTTHUMG00000161136.1 25783 468 7 ENSG00000213493.3 ACTN4P1 chr4 116598161 116599611 + processed_pseudogene KNOWN OTTHUMG00000161135.1 1451 1451 1 ENSG00000201752.1 RNU6-119P chr4 116839279 116839385 + snRNA KNOWN NA 107 107 1 ENSG00000271053.1 RP11-97F8.1 chr4 116858093 116858973 + processed_pseudogene KNOWN OTTHUMG00000185005.1 881 881 1 ENSG00000174599.5 TRAM1L1 chr4 117083554 117085576 - protein_coding KNOWN OTTHUMG00000132956.1 2023 2023 1 ENSG00000223605.1 AC107399.1 chr4 117249924 117250188 + unprocessed_pseudogene KNOWN OTTHUMG00000059448.1 265 265 1 ENSG00000202444.1 RNU5E-6P chr1 44819883 44819997 - snRNA KNOWN NA 115 115 1 ENSG00000224932.1 AC107399.2 chr4 117314597 117360639 - lincRNA NOVEL OTTHUMG00000059449.2 46043 735 7 ENSG00000228358.4 AC113617.1 chr4 117360625 117372852 + lincRNA NOVEL OTTHUMG00000059445.4 12228 881 16 ENSG00000236922.8 LINC01378 chr4 117406166 117691188 + lincRNA NOVEL OTTHUMG00000059450.8 285023 4047 27 ENSG00000237684.1 RPSAP35 chr4 117413462 117414279 + processed_pseudogene KNOWN OTTHUMG00000059446.1 818 818 1 ENSG00000213492.2 NT5C3AP1 chr4 117574512 117576174 - transcribed_processed_pseudogene KNOWN OTTHUMG00000059451.2 1663 1663 2 ENSG00000229565.1 AC108056.1 chr4 117834401 117869948 + lincRNA NOVEL OTTHUMG00000059447.1 35548 576 2 ENSG00000164100.8 NDST3 chr4 118033618 118258648 + protein_coding KNOWN OTTHUMG00000132959.4 225031 7009 16 ENSG00000251463.2 FKBP4P1 chr4 118193405 118194751 - processed_pseudogene KNOWN OTTHUMG00000161414.2 1347 1347 1 ENSG00000269893.5 SNHG8 chr4 118278709 118279823 + lincRNA KNOWN OTTHUMG00000183991.1 1115 923 16 ENSG00000275994.1 SNORA24 chr4 118279190 118279320 + snoRNA KNOWN NA 131 131 1 ENSG00000226499.1 RP5-882O7.1 chr1 44843921 44844082 - processed_pseudogene KNOWN OTTHUMG00000008588.1 162 162 1 ENSG00000164099.3 PRSS12 chr4 118280038 118353003 - protein_coding KNOWN OTTHUMG00000161166.3 72966 5725 23 ENSG00000230671.2 NDUFS5P5 chr4 118400514 118400834 - processed_pseudogene KNOWN OTTHUMG00000161383.1 321 321 1 ENSG00000279252.1 AC092670.1 chr4 118459923 118460328 - pseudogene NOVEL NA 406 403 2 ENSG00000154608.12 CEP170P1 chr4 118467590 118554204 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000132958.3 86615 4737 25 ENSG00000260404.2 RP11-384K6.6 chr4 118591773 118633729 + lincRNA NOVEL OTTHUMG00000161164.3 41957 4395 10 ENSG00000223225.1 RNU6-1054P chr4 118606450 118606553 + snRNA KNOWN NA 104 104 1 ENSG00000225892.3 RP11-384K6.2 chr4 118632274 118634759 + transcribed_processed_pseudogene KNOWN OTTHUMG00000161207.1 2486 2486 1 ENSG00000248213.3 CICP16 chr4 118635970 118638782 - processed_pseudogene KNOWN OTTHUMG00000161208.2 2813 2813 1 ENSG00000251155.2 RP11-384K6.4 chr4 118640673 118640858 + processed_pseudogene KNOWN OTTHUMG00000161210.2 186 186 1 ENSG00000281731.1 RP11-384K6.8 chr4 118664087 118685341 - lincRNA NOVEL OTTHUMG00000189712.1 21255 2276 15 ENSG00000008128.21 CDK11A chr1 1702730 1724324 - protein_coding KNOWN OTTHUMG00000000703.14 21595 4701 223 ENSG00000070785.15 EIF2B3 chr1 44850522 44986722 - protein_coding KNOWN OTTHUMG00000008585.4 136201 3411 71 ENSG00000145388.13 METTL14 chr4 118685368 118715433 + protein_coding KNOWN OTTHUMG00000161167.4 30066 6862 40 ENSG00000150961.13 SEC24D chr4 118722823 118838683 - protein_coding KNOWN OTTHUMG00000132957.6 115861 9920 141 ENSG00000172403.9 SYNPO2 chr4 118850688 119061247 + protein_coding KNOWN OTTHUMG00000161165.3 210560 14034 26 ENSG00000249002.2 RP11-358D17.1 chr4 119006032 119006401 + processed_pseudogene KNOWN OTTHUMG00000161170.2 370 370 1 ENSG00000280551.1 RP11-358D17.2 chr4 119042024 119043937 + TEC KNOWN OTTHUMG00000189709.1 1914 1914 1 ENSG00000172399.5 MYOZ2 chr4 119135784 119187789 + protein_coding KNOWN OTTHUMG00000132968.2 52006 2597 6 ENSG00000178636.7 RP11-455G16.1 chr4 119192773 119212644 - transcribed_processed_pseudogene KNOWN OTTHUMG00000161336.2 19872 2462 8 ENSG00000145390.10 USP53 chr4 119212587 119295517 + protein_coding KNOWN OTTHUMG00000161331.3 82931 11950 74 ENSG00000164096.12 C4orf3 chr4 119296419 119304445 - protein_coding KNOWN OTTHUMG00000161333.4 8027 3148 5 ENSG00000145384.3 FABP2 chr4 119317250 119322390 - protein_coding KNOWN OTTHUMG00000132972.1 5141 2478 4 ENSG00000266294.1 AL136380.1 chr1 44913068 44913172 - miRNA NOVEL NA 105 105 1 ENSG00000250412.1 KLHL2P1 chr4 119334329 119378233 + unprocessed_pseudogene KNOWN OTTHUMG00000161332.2 43905 521 4 ENSG00000201186.1 RNU4-33P chr4 119367562 119367646 + snRNA KNOWN NA 85 85 1 ENSG00000249244.1 RP11-548H18.2 chr4 119391831 119395335 - unprocessed_pseudogene KNOWN OTTHUMG00000161327.2 3505 3505 1 ENSG00000260091.1 RP11-33B1.4 chr4 119409333 119410233 + lincRNA NOVEL OTTHUMG00000176082.1 901 901 1 ENSG00000223208.1 RNU6-1217P chr4 119434005 119434108 - snRNA KNOWN NA 104 104 1 ENSG00000248280.1 RP11-33B1.2 chr4 119440561 119450157 - unprocessed_pseudogene KNOWN OTTHUMG00000161335.1 9597 356 4 ENSG00000245958.5 RP11-33B1.1 chr4 119454791 119552025 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000160571.3 97235 5577 57 ENSG00000250950.1 RP11-33B1.3 chr4 119456350 119457277 + lincRNA NOVEL OTTHUMG00000161575.1 928 573 2 ENSG00000138735.14 PDE5A chr4 119494395 119628991 - protein_coding KNOWN OTTHUMG00000132971.5 134597 9775 100 ENSG00000221245.1 SNORA11 chr4 119569699 119569825 + snoRNA NOVEL NA 127 127 1 ENSG00000253039.1 RNA5SP47 chr1 44932323 44932431 + rRNA KNOWN NA 109 109 1 ENSG00000250772.4 LINC01365 chr4 119799089 119804515 - lincRNA NOVEL OTTHUMG00000161337.2 5427 702 10 ENSG00000250183.2 RP11-96A1.4 chr4 119937557 119963898 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000161328.2 26342 819 7 ENSG00000250392.2 RP11-700N1.1 chr4 119939540 119964293 + lincRNA NOVEL OTTHUMG00000161334.2 24754 642 2 ENSG00000200553.1 Y_RNA chr4 119947131 119947232 + misc_RNA NOVEL NA 102 102 1 ENSG00000253825.1 RP11-96A1.5 chr4 120035033 120040615 - lincRNA NOVEL OTTHUMG00000164939.1 5583 474 2 ENSG00000164109.12 MAD2L1 chr4 120055608 120067074 - protein_coding KNOWN OTTHUMG00000132967.3 11467 5748 16 ENSG00000250938.4 RP11-679C8.2 chr4 120066958 120416766 + antisense NOVEL OTTHUMG00000161124.2 349809 3500 18 ENSG00000250219.2 LTV1P1 chr4 120091046 120092282 - processed_pseudogene KNOWN OTTHUMG00000161330.2 1237 1237 1 ENSG00000225665.4 SAR1P3 chr4 120342056 120342647 + processed_pseudogene KNOWN OTTHUMG00000161123.1 592 592 1 ENSG00000249409.1 RP11-501E14.1 chr4 120639090 120650796 + lincRNA NOVEL OTTHUMG00000161141.1 11707 552 4 ENSG00000229815.1 CCNB1IP1P1 chr1 44958557 44959395 + processed_pseudogene KNOWN OTTHUMG00000008582.1 839 839 1 ENSG00000138738.9 PRDM5 chr4 120684919 120922870 - protein_coding KNOWN OTTHUMG00000132970.2 237952 9517 96 ENSG00000212359.1 RNU6-550P chr4 120810469 120810569 + snRNA KNOWN NA 101 101 1 ENSG00000251609.2 SETP12 chr4 120895494 120897083 - processed_pseudogene KNOWN OTTHUMG00000161142.2 1590 805 3 ENSG00000173376.12 NDNF chr4 121035613 121073021 - protein_coding KNOWN OTTHUMG00000132973.3 37409 3556 15 ENSG00000223006.1 RN7SKP137 chr4 121061172 121061478 - misc_RNA KNOWN NA 307 307 1 ENSG00000250344.1 RP11-647P12.1 chr4 121071429 121080476 + lincRNA NOVEL OTTHUMG00000161161.1 9048 621 3 ENSG00000271302.1 RP11-647P12.2 chr4 121118299 121118734 + processed_pseudogene KNOWN OTTHUMG00000185041.1 436 436 1 ENSG00000050730.14 TNIP3 chr4 121131408 121227466 - protein_coding KNOWN OTTHUMG00000132969.5 96059 3768 59 ENSG00000252183.1 RNU6-948P chr4 121192797 121192903 - snRNA KNOWN NA 107 107 1 ENSG00000207148.1 Y_RNA chr4 121329069 121329170 - misc_RNA NOVEL NA 102 102 1 ENSG00000232369.1 RP5-882O7.4 chr1 44988234 44988725 - processed_pseudogene KNOWN OTTHUMG00000008583.1 492 492 1 ENSG00000186867.9 QRFPR chr4 121329312 121381059 - protein_coding KNOWN OTTHUMG00000133036.2 51748 2160 21 ENSG00000213480.3 RP11-364P2.2 chr4 121369433 121370345 - processed_pseudogene KNOWN OTTHUMG00000161160.1 913 913 1 ENSG00000264927.1 AC093816.1 chr4 121402587 121402671 - miRNA NOVEL NA 85 85 1 ENSG00000224062.4 TUBB4BP5 chr4 121451541 121451967 + processed_pseudogene KNOWN OTTHUMG00000161159.2 427 427 1 ENSG00000164111.13 ANXA5 chr4 121667955 121697113 - protein_coding KNOWN OTTHUMG00000133034.4 29159 3034 88 ENSG00000164112.11 TMEM155 chr4 121758933 121765427 - protein_coding KNOWN OTTHUMG00000133035.4 6495 3024 40 ENSG00000226757.2 PP12613 chr4 121764585 121766814 + antisense NOVEL OTTHUMG00000187204.1 2230 2230 1 ENSG00000123737.11 EXOSC9 chr4 121801317 121817021 + protein_coding KNOWN OTTHUMG00000128783.6 15705 4711 96 ENSG00000145386.8 CCNA2 chr4 121816444 121823933 - protein_coding KNOWN OTTHUMG00000133072.3 7490 2798 16 ENSG00000138686.8 BBS7 chr4 121824440 121870497 - protein_coding KNOWN OTTHUMG00000133076.2 46058 4829 50 ENSG00000268949.1 MRPS17P1 chr1 44988705 44991834 - processed_pseudogene KNOWN OTTHUMG00000008584.2 3130 3130 1 ENSG00000261501.1 RP11-63B13.1 chr4 121870583 121872848 + lincRNA NOVEL OTTHUMG00000176031.1 2266 2266 1 ENSG00000138741.9 TRPC3 chr4 121879027 121951754 - protein_coding KNOWN OTTHUMG00000133069.3 72728 4358 47 ENSG00000237868.1 AC097533.1 chr4 122077840 122078318 - processed_pseudogene KNOWN OTTHUMG00000150117.1 479 479 1 ENSG00000241037.3 RN7SL335P chr4 122087508 122087811 - misc_RNA KNOWN NA 304 304 1 ENSG00000138688.14 KIAA1109 chr4 122152333 122362758 + protein_coding KNOWN OTTHUMG00000150116.3 210426 20470 344 ENSG00000164113.9 ADAD1 chr4 122378966 122429802 + protein_coding KNOWN OTTHUMG00000150128.2 50837 2699 55 ENSG00000109471.4 IL2 chr4 122451470 122456725 - protein_coding KNOWN OTTHUMG00000133075.2 5256 1119 7 ENSG00000138684.6 IL21 chr4 122612628 122621069 - protein_coding KNOWN OTTHUMG00000133073.1 8442 719 9 ENSG00000227145.1 IL21-AS1 chr4 122618983 122689156 + antisense NOVEL OTTHUMG00000150127.1 70174 3748 11 ENSG00000224786.1 CETN4P chr4 122730548 122732193 - unitary_pseudogene KNOWN OTTHUMG00000150126.1 1646 469 4 ENSG00000126107.13 HECTD3 chr1 45002540 45011329 - protein_coding KNOWN OTTHUMG00000008587.1 8790 5077 59 ENSG00000181004.8 BBS12 chr4 122732702 122744943 + protein_coding KNOWN OTTHUMG00000133070.2 12242 3432 8 ENSG00000244083.1 RP11-170N16.1 chr4 122815771 122816117 - processed_pseudogene KNOWN OTTHUMG00000157548.1 347 347 1 ENSG00000138685.11 FGF2 chr4 122826708 122898236 + protein_coding KNOWN OTTHUMG00000039506.4 71529 6775 9 ENSG00000253069.1 AC021205.1 chr4 122827014 122827090 + miRNA NOVEL NA 77 77 1 ENSG00000240775.1 RP11-170N16.2 chr4 122840343 122840690 + processed_pseudogene KNOWN OTTHUMG00000157549.1 348 348 1 ENSG00000273007.1 RP11-170N16.3 chr4 122881878 122884712 - antisense NOVEL OTTHUMG00000186036.1 2835 1709 2 ENSG00000170917.12 NUDT6 chr4 122888697 122922968 - protein_coding KNOWN OTTHUMG00000039507.6 34272 6591 32 ENSG00000145375.7 SPATA5 chr4 122923074 123319450 + protein_coding KNOWN OTTHUMG00000133074.4 396377 8247 31 ENSG00000276962.1 AC021205.2 chr4 122977895 122977972 - miRNA NOVEL NA 78 78 1 ENSG00000216154.2 AC109357.1 chr4 123007583 123007672 + miRNA NOVEL NA 90 90 1 ENSG00000126088.11 UROD chr1 45012147 45015575 + protein_coding KNOWN OTTHUMG00000008949.2 3429 2908 107 ENSG00000250322.2 CTB-51E13.1 chr4 123259949 123260118 - processed_pseudogene KNOWN OTTHUMG00000161158.2 170 170 1 ENSG00000164056.9 SPRY1 chr4 123396795 123403760 + protein_coding KNOWN OTTHUMG00000133071.2 6966 3963 18 ENSG00000249125.1 RP11-381N20.2 chr4 123490268 123522106 + lincRNA NOVEL OTTHUMG00000161303.1 31839 539 3 ENSG00000251526.1 RP11-381N20.1 chr4 123505279 123527525 + lincRNA NOVEL OTTHUMG00000161297.1 22247 584 3 ENSG00000249464.4 LINC01091 chr4 123650267 123930406 + lincRNA NOVEL OTTHUMG00000161162.3 280140 7779 18 ENSG00000226655.1 AC096732.2 chr4 123744923 123745673 - lincRNA NOVEL OTTHUMG00000155267.1 751 477 3 ENSG00000228489.1 RPL21P50 chr4 123745750 123746226 - processed_pseudogene KNOWN OTTHUMG00000155266.1 477 477 1 ENSG00000250458.2 RP11-107E21.1 chr4 123861860 123862015 - processed_pseudogene KNOWN OTTHUMG00000161296.2 156 156 1 ENSG00000250484.2 RP11-728C8.1 chr4 124062462 124062990 + processed_pseudogene KNOWN OTTHUMG00000161295.2 529 529 1 ENSG00000249837.1 CTD-2325B11.1 chr4 124149377 124252044 - lincRNA NOVEL OTTHUMG00000161387.2 102668 430 5 ENSG00000162415.6 ZSWIM5 chr1 45016399 45306209 - protein_coding KNOWN OTTHUMG00000008950.2 289811 6046 17 ENSG00000248506.1 RP11-93I21.2 chr4 124435750 124437120 - processed_pseudogene KNOWN OTTHUMG00000161385.1 1371 1371 1 ENSG00000248565.2 TECRP2 chr4 124462863 124463790 - processed_pseudogene KNOWN OTTHUMG00000161388.2 928 928 1 ENSG00000261083.1 RP11-93I21.3 chr4 124499942 124558434 - lincRNA NOVEL OTTHUMG00000176090.1 58493 1771 9 ENSG00000151458.10 ANKRD50 chr4 124664052 124712732 - protein_coding KNOWN OTTHUMG00000161398.1 48681 8794 9 ENSG00000196159.10 FAT4 chr4 125316399 125492932 + protein_coding KNOWN OTTHUMG00000133100.3 176534 16439 34 ENSG00000201297.1 Y_RNA chr4 125362819 125362929 + misc_RNA NOVEL NA 111 111 1 ENSG00000250149.1 RP11-399F2.2 chr4 125676718 125752793 + lincRNA NOVEL OTTHUMG00000161149.1 76076 393 2 ENSG00000251436.2 NUPL1P1 chr4 125681177 125683668 - processed_pseudogene KNOWN OTTHUMG00000161150.2 2492 1738 2 ENSG00000249555.2 TMEM248P1 chr4 125723267 125724217 - processed_pseudogene KNOWN OTTHUMG00000161145.2 951 951 1 ENSG00000251649.1 RP11-318I4.1 chr4 126070708 126072004 + lincRNA NOVEL OTTHUMG00000161146.1 1297 300 2 ENSG00000234315.1 OSTCP5 chr1 45069977 45070429 - processed_pseudogene KNOWN OTTHUMG00000008966.1 453 453 1 ENSG00000251005.1 RP11-318I4.2 chr4 126106139 126106923 - processed_pseudogene KNOWN OTTHUMG00000161148.1 785 399 2 ENSG00000223620.3 RBM48P1 chr4 126563509 126564776 + processed_pseudogene KNOWN OTTHUMG00000161147.2 1268 1102 2 ENSG00000199862.1 Y_RNA chr4 127028107 127028219 - misc_RNA NOVEL NA 113 113 1 ENSG00000250945.1 RP11-810P8.1 chr4 127043430 127077762 - lincRNA NOVEL OTTHUMG00000161764.1 34333 648 3 ENSG00000248491.4 RP11-125O18.1 chr4 127096891 127470569 - lincRNA NOVEL OTTHUMG00000161765.1 373679 1077 11 ENSG00000248209.1 RP11-18O11.1 chr4 127493505 127493828 + processed_pseudogene KNOWN OTTHUMG00000161201.1 324 324 1 ENSG00000249795.1 RP11-18O11.2 chr4 127498327 127498807 + processed_pseudogene KNOWN OTTHUMG00000161200.1 481 481 1 ENSG00000164066.11 INTU chr4 127623271 127726737 + protein_coding KNOWN OTTHUMG00000161202.3 103467 16066 68 ENSG00000151475.5 SLC25A31 chr4 127730378 127774299 + protein_coding KNOWN OTTHUMG00000133300.4 43922 1841 6 ENSG00000164070.10 HSPA4L chr4 127781821 127840733 + protein_coding KNOWN OTTHUMG00000133302.3 58913 11621 74 ENSG00000268575.1 RP1-283E3.8 chr1 1702736 1737688 - processed_transcript NOVEL OTTHUMG00000183552.1 34953 5079 20 ENSG00000221707.2 AL592294.1 chr1 45232218 45232307 - miRNA NOVEL NA 90 90 1 ENSG00000244021.4 RP11-50D9.1 chr4 127812720 127813200 - processed_pseudogene KNOWN OTTHUMG00000157551.2 481 481 1 ENSG00000261668.1 RP11-50D9.3 chr4 127840198 127844040 - antisense NOVEL OTTHUMG00000176114.1 3843 3843 1 ENSG00000142731.9 PLK4 chr4 127880861 127899195 + protein_coding KNOWN OTTHUMG00000133301.5 18335 4482 105 ENSG00000251821.1 RNU6-583P chr4 127891991 127892082 + snRNA KNOWN NA 92 92 1 ENSG00000164073.8 MFSD8 chr4 127917805 127965995 - protein_coding KNOWN OTTHUMG00000133303.2 48191 5023 65 ENSG00000164074.13 C4orf29 chr4 127965306 128039711 + protein_coding KNOWN OTTHUMG00000133304.4 74406 6491 64 ENSG00000138709.16 LARP1B chr4 128061268 128222931 + protein_coding KNOWN OTTHUMG00000133343.2 161664 8792 102 ENSG00000241651.4 RP11-214O14.1 chr4 128069014 128069612 - processed_pseudogene KNOWN OTTHUMG00000157552.2 599 599 1 ENSG00000248394.1 FOSL1P1 chr4 128155389 128156204 + processed_pseudogene KNOWN OTTHUMG00000161163.1 816 816 1 ENSG00000164040.15 PGRMC2 chr4 128269237 128288829 - protein_coding KNOWN OTTHUMG00000133342.4 19593 4626 24 ENSG00000281912.1 LINC01144 chr1 45303910 45305619 + lincRNA KNOWN OTTHUMG00000189536.1 1710 1710 1 ENSG00000251432.5 RP11-420A23.1 chr4 128292751 128519394 + lincRNA NOVEL OTTHUMG00000161321.3 226644 3283 25 ENSG00000273077.1 RP11-130C6.1 chr4 128552590 128553416 - lincRNA NOVEL OTTHUMG00000186365.1 827 303 2 ENSG00000248187.1 RP11-184M15.1 chr4 128567972 128570531 - lincRNA NOVEL OTTHUMG00000161178.1 2560 1623 2 ENSG00000248802.1 RP11-184M15.2 chr4 128582999 128601407 - lincRNA NOVEL OTTHUMG00000161177.1 18409 597 4 ENSG00000280711.1 JADRR chr4 128768228 128769948 + lincRNA KNOWN OTTHUMG00000189573.1 1721 1721 1 ENSG00000077684.14 JADE1 chr4 128809623 128875224 + protein_coding KNOWN OTTHUMG00000161176.3 65602 9129 107 ENSG00000151466.10 SCLT1 chr4 128864921 129093607 - protein_coding KNOWN OTTHUMG00000133346.4 228687 8292 91 ENSG00000275647.1 RP11-209D20.2 chr4 128944628 128944956 + processed_pseudogene KNOWN OTTHUMG00000187591.1 329 329 1 ENSG00000281369.1 AC093826.1 chr4 129041766 129041877 + pseudogene NOVEL NA 112 108 2 ENSG00000151470.11 C4orf33 chr4 129093317 129116640 + protein_coding KNOWN OTTHUMG00000133347.4 23324 7015 28 ENSG00000186603.5 HPDL chr1 45326905 45328533 + protein_coding KNOWN OTTHUMG00000007681.1 1629 1629 1 ENSG00000251345.2 RP11-392L5.2 chr4 129133106 129134098 + processed_pseudogene KNOWN OTTHUMG00000161309.2 993 993 1 ENSG00000248958.2 ZSWIM5P3 chr4 129135926 129139740 - processed_pseudogene KNOWN OTTHUMG00000161310.2 3815 2743 3 ENSG00000251195.1 RP11-378N18.1 chr4 129177386 129179094 + processed_pseudogene KNOWN OTTHUMG00000161196.1 1709 285 2 ENSG00000250193.1 RP11-419L4.1 chr4 129299175 129305022 - lincRNA NOVEL OTTHUMG00000161198.1 5848 575 2 ENSG00000246876.5 RP11-519M16.1 chr4 129724171 129771481 - lincRNA NOVEL OTTHUMG00000161199.1 47311 2456 11 ENSG00000249618.4 RP11-422J15.1 chr4 129771659 129955368 + lincRNA NOVEL OTTHUMG00000161197.1 183710 2477 28 ENSG00000234125.5 EEF1GP8 chr4 129903010 129904163 + processed_pseudogene KNOWN OTTHUMG00000161195.1 1154 1154 1 ENSG00000251326.1 RP11-521E5.1 chr4 130376229 130386371 + lincRNA NOVEL OTTHUMG00000161766.1 10143 630 2 ENSG00000248877.2 PGBD4P4 chr4 130494673 130495285 + processed_pseudogene KNOWN OTTHUMG00000161057.2 613 613 1 ENSG00000249018.2 GAPDHP56 chr4 130503357 130504344 - processed_pseudogene KNOWN OTTHUMG00000159979.2 988 988 1 ENSG00000132781.16 MUTYH chr1 45329163 45340470 - protein_coding KNOWN OTTHUMG00000007682.5 11308 3909 352 ENSG00000280059.1 RP11-401I19.2 chr4 130808507 130811933 + TEC KNOWN OTTHUMG00000175957.1 3427 3427 1 ENSG00000250503.1 RP11-401I19.1 chr4 130881027 130885641 - lincRNA NOVEL OTTHUMG00000161070.2 4615 434 2 ENSG00000250213.2 RP11-488I4.2 chr4 131112748 131113255 + processed_pseudogene KNOWN OTTHUMG00000161069.2 508 188 2 ENSG00000206782.1 RNU6-224P chr4 131273242 131273348 + snRNA KNOWN NA 107 107 1 ENSG00000250102.4 RP11-314N14.1 chr4 131380013 131541397 + lincRNA NOVEL OTTHUMG00000161095.2 161385 914 7 ENSG00000248715.2 RP11-758B24.1 chr4 131540281 131540489 + processed_pseudogene KNOWN OTTHUMG00000161093.2 209 209 1 ENSG00000241392.3 RN7SL205P chr4 131720260 131720543 - misc_RNA KNOWN NA 284 284 1 ENSG00000252014.1 SNORA70 chr4 131768140 131768249 + snoRNA NOVEL NA 110 110 1 ENSG00000249416.2 RP11-614F17.1 chr4 131768233 131768578 + processed_pseudogene KNOWN OTTHUMG00000161094.2 346 346 1 ENSG00000251676.1 RP11-614F17.2 chr4 131773302 131791482 + lincRNA NOVEL OTTHUMG00000161213.2 18181 1198 7 ENSG00000132773.10 TOE1 chr1 45339670 45343975 + protein_coding KNOWN OTTHUMG00000007678.2 4306 2742 34 ENSG00000184139.8 RPL7AP28 chr4 131857343 131857913 - processed_pseudogene KNOWN OTTHUMG00000157555.2 571 571 1 ENSG00000251555.1 RP11-745L13.2 chr4 131930031 131975952 - lincRNA NOVEL OTTHUMG00000161235.1 45922 454 3 ENSG00000251598.1 RP11-789C2.1 chr4 132004810 132124031 - lincRNA NOVEL OTTHUMG00000161767.1 119222 582 3 ENSG00000249463.1 RP11-1E22.1 chr4 132027175 132028434 - lincRNA NOVEL OTTHUMG00000161234.1 1260 347 2 ENSG00000251051.1 ELL2P2 chr4 132367786 132368479 - processed_pseudogene KNOWN OTTHUMG00000161251.1 694 694 1 ENSG00000248369.1 RP11-62N21.1 chr4 132435802 132447235 - lincRNA NOVEL OTTHUMG00000161769.1 11434 464 3 ENSG00000251398.1 LINC01256 chr4 132591089 132678503 + lincRNA NOVEL OTTHUMG00000161768.1 87415 508 4 ENSG00000249038.2 AARSP1 chr4 132592084 132592536 + processed_pseudogene KNOWN OTTHUMG00000161188.2 453 453 1 ENSG00000251488.1 RP11-404I7.2 chr4 132836772 132981677 - lincRNA NOVEL OTTHUMG00000161298.1 144906 587 3 ENSG00000249513.2 RP11-404I7.1 chr4 132985510 132988677 - lincRNA NOVEL OTTHUMG00000161302.4 3168 462 3 ENSG00000070759.15 TESK2 chr1 45343883 45491166 - protein_coding KNOWN OTTHUMG00000007680.2 147284 3322 33 ENSG00000250241.4 RP11-9G1.3 chr4 133075311 133149116 - lincRNA NOVEL OTTHUMG00000161299.2 73806 3274 19 ENSG00000248735.2 R3HDM2P1 chr4 133124104 133126063 + processed_pseudogene KNOWN OTTHUMG00000161300.2 1960 1960 1 ENSG00000138650.8 PCDH10 chr4 133149315 133208606 + protein_coding KNOWN OTTHUMG00000161301.4 59292 10161 9 ENSG00000221637.1 AC105252.1 chr4 133560856 133560934 - miRNA NOVEL NA 79 79 1 ENSG00000250191.1 RP11-285A15.1 chr4 133574566 133575208 - unprocessed_pseudogene KNOWN OTTHUMG00000161290.1 643 286 3 ENSG00000281057.1 AC118562.1 chr4 133708226 133708335 + miRNA NOVEL NA 110 110 1 ENSG00000251388.1 RP11-427M20.1 chr4 133871246 134010690 - lincRNA NOVEL OTTHUMG00000161291.1 139445 619 4 ENSG00000266277.1 AC096763.1 chr4 134043467 134043553 - miRNA NOVEL NA 87 87 1 ENSG00000254535.3 PABPC4L chr4 134196333 134201748 - protein_coding KNOWN OTTHUMG00000161292.2 5416 4944 2 ENSG00000251199.4 RP11-400D2.2 chr4 134255173 134327473 - lincRNA NOVEL OTTHUMG00000161471.1 72301 1327 9 ENSG00000236872.1 RP11-291L19.1 chr1 45415020 45415344 + processed_pseudogene KNOWN OTTHUMG00000007679.1 325 325 1 ENSG00000248191.1 PES1P1 chr4 134327063 134328798 + processed_pseudogene KNOWN OTTHUMG00000161470.1 1736 1736 1 ENSG00000251291.1 RP11-400D2.3 chr4 134423867 134457852 + lincRNA NOVEL OTTHUMG00000161469.1 33986 430 3 ENSG00000249000.1 CTD-2012I17.1 chr4 134759399 134817289 + lincRNA NOVEL OTTHUMG00000161215.1 57891 489 5 ENSG00000249847.1 RP11-192C21.2 chr4 134932889 134934131 - lincRNA NOVEL OTTHUMG00000161221.1 1243 646 2 ENSG00000251228.1 RP11-192C21.3 chr4 134944275 134944523 + processed_pseudogene KNOWN OTTHUMG00000161219.1 249 249 1 ENSG00000241411.1 RP11-192C21.1 chr4 134952259 134952889 - processed_pseudogene KNOWN OTTHUMG00000157557.1 631 631 1 ENSG00000250144.1 RP11-553P9.1 chr4 135045464 135046850 + processed_pseudogene KNOWN OTTHUMG00000161220.1 1387 1387 1 ENSG00000248434.1 RP11-553P9.2 chr4 135067233 135097658 + lincRNA NOVEL OTTHUMG00000161217.1 30426 1121 9 ENSG00000248456.1 RP11-553P9.3 chr4 135112905 135123779 - lincRNA NOVEL OTTHUMG00000161216.1 10875 981 6 ENSG00000250834.1 KRT18P54 chr4 135371177 135371924 - processed_pseudogene KNOWN OTTHUMG00000161222.1 748 748 1 ENSG00000280670.1 CCDC163P chr1 45493866 45500079 - protein_coding KNOWN OTTHUMG00000007741.9 6214 2757 42 ENSG00000207849.2 AC108867.1 chr4 135371590 135371681 - miRNA NOVEL NA 92 92 1 ENSG00000248104.1 TARS2P1 chr4 135565117 135567157 - processed_pseudogene KNOWN OTTHUMG00000161214.1 2041 2041 1 ENSG00000250865.1 RP11-780O17.1 chr4 135792384 135805904 - lincRNA NOVEL OTTHUMG00000161218.1 13521 564 3 ENSG00000248330.4 LINC00613 chr4 135866983 135913680 - lincRNA NOVEL OTTHUMG00000161224.1 46698 546 9 ENSG00000207322.1 RNU1-89P chr4 135995929 135996092 - snRNA KNOWN NA 164 164 1 ENSG00000251492.1 RP11-782E2.2 chr4 136004509 136004902 - processed_pseudogene KNOWN OTTHUMG00000161223.1 394 394 1 ENSG00000261166.1 RP11-775H9.3 chr4 136097797 136099240 - lincRNA NOVEL OTTHUMG00000176095.1 1444 1444 1 ENSG00000251567.4 RP11-775H9.2 chr4 136118675 136395471 - lincRNA NOVEL OTTHUMG00000161242.1 276797 1358 7 ENSG00000250665.1 RP11-775H9.1 chr4 136125909 136138874 + lincRNA NOVEL OTTHUMG00000161238.2 12966 503 3 ENSG00000249311.4 TERF1P3 chr4 136355110 136356336 - processed_pseudogene KNOWN OTTHUMG00000161240.2 1227 1227 1 ENSG00000132763.13 MMACHC chr1 45500053 45513382 + protein_coding KNOWN OTTHUMG00000007742.5 13330 5296 11 ENSG00000279749.1 RP11-625B21.1 chr4 136553236 136553739 + TEC KNOWN OTTHUMG00000161241.1 504 504 1 ENSG00000264362.1 AC093875.1 chr4 136707178 136707261 - miRNA NOVEL NA 84 84 1 ENSG00000248869.4 RP11-138I17.1 chr4 136796722 137212799 - lincRNA NOVEL OTTHUMG00000161243.2 416078 1935 8 ENSG00000250341.1 RP11-785F11.1 chr4 137193756 137198367 + lincRNA NOVEL OTTHUMG00000161278.1 4612 1576 2 ENSG00000222526.2 AC060835.1 chr4 137228126 137228231 + miRNA NOVEL NA 106 106 1 ENSG00000250813.1 SERF1AP1 chr4 137301001 137301187 - processed_pseudogene KNOWN OTTHUMG00000161250.1 187 187 1 ENSG00000251440.2 STMN1P2 chr4 137425426 137425864 - processed_pseudogene KNOWN OTTHUMG00000161277.2 439 439 1 ENSG00000213448.3 RPS23P2 chr4 137448087 137448501 + processed_pseudogene KNOWN OTTHUMG00000157567.2 415 415 1 ENSG00000189184.10 PCDH18 chr4 137518918 137532494 - protein_coding KNOWN OTTHUMG00000161348.2 13577 6686 32 ENSG00000251632.1 RP11-714L20.1 chr4 137545731 137603430 + lincRNA NOVEL OTTHUMG00000161349.1 57700 2264 2 ENSG00000117450.12 PRDX1 chr1 45511036 45523047 - protein_coding KNOWN OTTHUMG00000007738.6 12012 1522 30 ENSG00000280352.1 RP13-884E18.3 chr4 137601899 137602433 - TEC KNOWN OTTHUMG00000161344.1 535 535 1 ENSG00000250126.1 RP13-884E18.2 chr4 137645265 137655174 - lincRNA NOVEL OTTHUMG00000161347.1 9910 396 4 ENSG00000250777.1 RP13-884E18.4 chr4 137690477 137734977 - lincRNA NOVEL OTTHUMG00000161346.1 44501 512 5 ENSG00000250034.1 RP11-793B23.1 chr4 137807706 137816402 + lincRNA NOVEL OTTHUMG00000161345.1 8697 258 2 ENSG00000248307.4 LINC00616 chr4 138027422 138130709 - lincRNA NOVEL OTTHUMG00000161281.1 103288 2365 25 ENSG00000250033.4 SLC7A11-AS1 chr4 138057464 138178177 + processed_transcript NOVEL OTTHUMG00000161284.2 120714 6161 19 ENSG00000151012.12 SLC7A11 chr4 138164097 138242349 - protein_coding KNOWN OTTHUMG00000133396.2 78253 9645 19 ENSG00000249091.1 RP11-733C7.1 chr4 138277115 138281784 - lincRNA NOVEL OTTHUMG00000161283.2 4670 405 2 ENSG00000248397.1 LINC00498 chr4 138298856 138312658 - lincRNA NOVEL OTTHUMG00000161288.1 13803 455 2 ENSG00000251372.4 LINC00499 chr4 138309711 138424344 + lincRNA NOVEL OTTHUMG00000161286.1 114634 1350 13 ENSG00000227775.3 RP1-283E3.4 chr1 1724512 1737251 + transcribed_processed_pseudogene KNOWN OTTHUMG00000000825.3 12740 2759 8 ENSG00000234379.1 HMGB1P48 chr1 45530927 45532139 + unprocessed_pseudogene KNOWN OTTHUMG00000007743.1 1213 598 3 ENSG00000281539.1 U7 chr4 138337530 138337588 + snRNA NOVEL NA 59 59 1 ENSG00000249381.1 LINC00500 chr4 138425523 138436869 + lincRNA NOVEL OTTHUMG00000161287.1 11347 539 2 ENSG00000248305.1 RP11-310A13.2 chr4 138481255 138482096 - processed_pseudogene KNOWN OTTHUMG00000161285.1 842 842 1 ENSG00000248795.1 RP11-173E2.1 chr4 138560704 138561941 + processed_pseudogene KNOWN OTTHUMG00000161280.1 1238 1238 1 ENSG00000250977.1 RP11-173E2.2 chr4 138664725 138665569 - lincRNA NOVEL OTTHUMG00000161289.1 845 563 2 ENSG00000250501.2 RP11-98O2.1 chr4 138773550 138801639 + lincRNA NOVEL OTTHUMG00000161282.1 28090 1066 6 ENSG00000238971.1 AC093766.1 chr4 138811678 138811766 - miRNA NOVEL NA 89 89 1 ENSG00000250195.1 RP11-371F15.3 chr4 138819954 139012646 - antisense NOVEL OTTHUMG00000161774.1 192693 664 8 ENSG00000250577.1 RP11-577B7.1 chr4 138923930 138924232 - lincRNA NOVEL OTTHUMG00000162042.1 303 303 1 ENSG00000280976.1 Metazoa_SRP chr4 138988030 138988288 + misc_RNA NOVEL NA 259 259 1 ENSG00000117448.12 AKR1A1 chr1 45550543 45570049 + protein_coding KNOWN OTTHUMG00000007740.3 19507 3121 76 ENSG00000151014.5 CCRN4L chr4 139015789 139045939 + protein_coding KNOWN OTTHUMG00000161271.6 30151 2504 8 ENSG00000264953.1 AC093602.1 chr4 139017493 139017579 - miRNA NOVEL NA 87 87 1 ENSG00000109381.18 ELF2 chr4 139028112 139177218 - protein_coding KNOWN OTTHUMG00000133383.6 149107 8560 72 ENSG00000252503.1 RNU6-531P chr4 139055475 139055578 + snRNA KNOWN NA 104 104 1 ENSG00000240723.3 RN7SL382P chr4 139100377 139100658 + misc_RNA KNOWN NA 282 282 1 ENSG00000179967.11 PPP1R14BP3 chr4 139114930 139115374 - processed_pseudogene KNOWN OTTHUMG00000161326.4 445 445 1 ENSG00000276396.1 Metazoa_SRP chr4 139155153 139155444 + misc_RNA NOVEL NA 292 292 1 ENSG00000265892.2 RN7SL311P chr4 139185441 139185746 + misc_RNA KNOWN NA 306 306 1 ENSG00000207384.1 Y_RNA chr4 139200395 139200513 + misc_RNA NOVEL NA 119 119 1 ENSG00000252362.1 RNU6-506P chr4 139231026 139231119 - snRNA KNOWN NA 94 94 1 ENSG00000281133.1 AL355480.3 chr1 45580892 45580996 - pseudogene NOVEL NA 105 96 3 ENSG00000206722.1 RNU6-1074P chr4 139256657 139256760 - snRNA KNOWN NA 104 104 1 ENSG00000137463.4 MGARP chr4 139266163 139280338 - protein_coding KNOWN OTTHUMG00000161325.1 14176 1339 4 ENSG00000109390.10 NDUFC1 chr4 139266880 139302551 - protein_coding KNOWN OTTHUMG00000133387.3 35672 1941 55 ENSG00000164134.11 NAA15 chr4 139301455 139420033 + protein_coding KNOWN OTTHUMG00000137363.6 118579 9712 64 ENSG00000200520.1 RNU6-1214P chr4 139318378 139318486 + snRNA KNOWN NA 109 109 1 ENSG00000273247.4 RP11-83A24.2 chr4 139411927 139454034 - antisense NOVEL OTTHUMG00000186367.2 42108 7954 13 ENSG00000248863.2 RP11-83A24.1 chr4 139426299 139430884 - transcribed_processed_pseudogene KNOWN OTTHUMG00000161324.2 4586 1240 3 ENSG00000239005.1 ACA64 chr4 139436368 139436494 - snoRNA NOVEL NA 127 127 1 ENSG00000172007.5 RAB33B chr4 139453232 139476609 + protein_coding KNOWN OTTHUMG00000133384.2 23378 5028 4 ENSG00000145391.12 SETD7 chr4 139495941 139606699 - protein_coding KNOWN OTTHUMG00000133385.8 110759 13916 37 ENSG00000280836.1 AL355480.1 chr1 45581219 45581321 - pseudogene NOVEL NA 103 99 2 ENSG00000249302.2 FTH1P24 chr4 139546266 139546727 + processed_pseudogene KNOWN OTTHUMG00000161273.2 462 462 1 ENSG00000272717.1 RP11-342I1.2 chr4 139556799 139557643 + antisense NOVEL OTTHUMG00000186389.1 845 845 1 ENSG00000261268.1 RP11-308D13.3 chr4 139618136 139623232 - lincRNA NOVEL OTTHUMG00000175997.1 5097 1098 2 ENSG00000085871.7 MGST2 chr4 139665768 139740745 + protein_coding KNOWN OTTHUMG00000133382.4 74978 3182 35 ENSG00000201533.1 RN7SKP237 chr4 139685127 139685427 - misc_RNA KNOWN NA 301 301 1 ENSG00000178458.5 H3F3AP6 chr4 139698144 139698554 - processed_pseudogene KNOWN OTTHUMG00000161274.2 411 411 1 ENSG00000196782.11 MAML3 chr4 139716753 140154184 - protein_coding KNOWN OTTHUMG00000161441.2 437432 7012 14 ENSG00000252233.1 RN7SKP253 chr4 139794125 139794433 - misc_RNA KNOWN NA 309 309 1 ENSG00000250698.1 RP11-392B6.1 chr4 140128015 140134565 + antisense NOVEL OTTHUMG00000161374.1 6551 657 3 ENSG00000153130.16 SCOC chr4 140257286 140385726 + protein_coding KNOWN OTTHUMG00000133416.4 128441 6294 47 ENSG00000132780.15 NASP chr1 45583846 45618904 + protein_coding KNOWN OTTHUMG00000007826.3 35059 8304 191 ENSG00000196951.9 SCOC-AS1 chr4 140283724 140373381 - antisense NOVEL OTTHUMG00000161377.2 89658 2410 12 ENSG00000249754.2 RP11-425I13.2 chr4 140314163 140314550 - processed_pseudogene KNOWN OTTHUMG00000161375.2 388 388 1 ENSG00000241923.2 RPL14P3 chr4 140366240 140366861 - processed_pseudogene KNOWN OTTHUMG00000157571.2 622 622 1 ENSG00000153132.11 CLGN chr4 140388455 140427968 - protein_coding KNOWN OTTHUMG00000133414.2 39514 3127 39 ENSG00000205301.10 MGAT4D chr4 140442262 140498377 - protein_coding KNOWN OTTHUMG00000161376.3 56116 5595 60 ENSG00000280262.1 RP11-542P2.2 chr4 140498402 140501330 + TEC KNOWN OTTHUMG00000175894.1 2929 2929 1 ENSG00000179387.8 ELMOD2 chr4 140524158 140553770 + protein_coding KNOWN OTTHUMG00000133417.4 29613 6627 35 ENSG00000109424.3 UCP1 chr4 140559434 140568805 - protein_coding KNOWN OTTHUMG00000133415.1 9372 1462 6 ENSG00000242102.3 RN7SL152P chr4 140577925 140578222 + misc_RNA KNOWN NA 298 298 1 ENSG00000248621.2 RP11-5K16.3 chr4 140600401 140600575 - processed_pseudogene KNOWN OTTHUMG00000161426.2 175 175 1 ENSG00000281112.1 AL355480.2 chr1 45592722 45592814 - pseudogene NOVEL NA 93 84 3 ENSG00000109436.7 TBC1D9 chr4 140620765 140756120 - protein_coding KNOWN OTTHUMG00000161405.2 135356 5603 25 ENSG00000249661.1 TNRC18P1 chr4 140641840 140645489 - processed_pseudogene KNOWN OTTHUMG00000161424.1 3650 3650 1 ENSG00000207155.1 RNY1P14 chr4 140700835 140700942 - misc_RNA KNOWN NA 108 108 1 ENSG00000248335.1 RP11-102N12.2 chr4 140712168 140716081 + antisense NOVEL OTTHUMG00000161425.1 3914 402 2 ENSG00000273472.1 RP11-102N12.3 chr4 140756528 140757921 + lincRNA NOVEL OTTHUMG00000186399.1 1394 1394 1 ENSG00000222613.1 Y_RNA chr4 140779039 140779141 - misc_RNA NOVEL NA 103 103 1 ENSG00000170153.9 RNF150 chr4 140859807 141212877 - protein_coding KNOWN OTTHUMG00000161380.5 353071 11007 38 ENSG00000109445.9 ZNF330 chr4 141220887 141234697 + protein_coding KNOWN OTTHUMG00000133413.6 13811 2536 55 ENSG00000248747.1 RP11-586L23.1 chr4 141240739 141278789 - lincRNA NOVEL OTTHUMG00000161379.1 38051 1037 3 ENSG00000248810.1 RP11-362F19.1 chr4 141319450 141332618 - lincRNA NOVEL OTTHUMG00000161381.2 13169 3750 7 ENSG00000281825.1 AL355480.4 chr1 45605657 45605730 - pseudogene NOVEL NA 74 69 2 ENSG00000250189.2 RP11-362F19.2 chr4 141405172 141407586 + processed_pseudogene KNOWN OTTHUMG00000161399.3 2415 2415 1 ENSG00000272632.1 RP11-362F19.3 chr4 141430831 141431284 + lincRNA NOVEL OTTHUMG00000186403.1 454 454 1 ENSG00000250141.1 RP11-208N20.1 chr4 141569931 141576077 - lincRNA NOVEL OTTHUMG00000161339.1 6147 138 2 ENSG00000164136.15 IL15 chr4 141636599 141733987 + protein_coding KNOWN OTTHUMG00000133418.7 97389 7860 50 ENSG00000109452.11 INPP4B chr4 142023160 142847432 - protein_coding KNOWN OTTHUMG00000161341.1 824273 14153 261 ENSG00000242134.2 RPL5P13 chr4 142286917 142287625 - processed_pseudogene KNOWN OTTHUMG00000157573.2 709 709 1 ENSG00000250835.1 LSM3P4 chr4 142317238 142317546 + processed_pseudogene KNOWN OTTHUMG00000161338.1 309 309 1 ENSG00000251248.1 RP11-223C24.2 chr4 142514446 142518983 + lincRNA NOVEL OTTHUMG00000161340.1 4538 440 2 ENSG00000249806.1 RP11-223C24.1 chr4 142566019 142660950 + lincRNA NOVEL OTTHUMG00000161342.1 94932 512 3 ENSG00000250326.1 RP11-284M14.1 chr4 142933195 143184861 - antisense NOVEL OTTHUMG00000161406.1 251667 1016 5 ENSG00000159588.13 CCDC17 chr1 45620044 45624057 - protein_coding KNOWN OTTHUMG00000007822.7 4014 3323 76 ENSG00000251300.1 RP11-54P19.1 chr4 143045086 143045878 + processed_pseudogene KNOWN OTTHUMG00000161407.1 793 793 1 ENSG00000170185.8 USP38 chr4 143184917 143223830 + protein_coding KNOWN OTTHUMG00000161420.1 38914 7787 30 ENSG00000250969.1 RP11-364L4.3 chr4 143286293 143329858 + lincRNA NOVEL OTTHUMG00000161553.1 43566 624 2 ENSG00000200049.1 Y_RNA chr4 143309466 143309566 + misc_RNA NOVEL NA 101 101 1 ENSG00000109458.7 GAB1 chr4 143336762 143474568 + protein_coding KNOWN OTTHUMG00000161432.12 137807 10119 68 ENSG00000265623.1 MIR3139 chr4 143343460 143343535 + miRNA KNOWN NA 76 76 1 ENSG00000228981.3 RP11-364L4.1 chr4 143349275 143350117 - processed_pseudogene KNOWN OTTHUMG00000157574.1 843 843 1 ENSG00000243175.1 RP11-58H15.1 chr4 143424753 143426013 + transcribed_processed_pseudogene KNOWN OTTHUMG00000157578.1 1261 1261 2 ENSG00000250540.1 RP11-58H15.3 chr4 143497412 143498126 - processed_pseudogene KNOWN OTTHUMG00000161475.1 715 371 2 ENSG00000153147.5 SMARCA5 chr4 143513463 143557486 + protein_coding KNOWN OTTHUMG00000161474.3 44024 8385 28 ENSG00000159592.9 GPBP1L1 chr1 45627304 45688113 - protein_coding KNOWN OTTHUMG00000040990.1 60810 7433 59 ENSG00000245112.2 SMARCA5-AS1 chr4 143513472 143514635 - antisense NOVEL OTTHUMG00000161539.1 1164 945 2 ENSG00000248924.2 RP11-481K16.2 chr4 143555082 143555583 - transcribed_processed_pseudogene KNOWN OTTHUMG00000161538.2 502 502 2 ENSG00000236296.6 GUSBP5 chr4 143559472 143649305 + transcribed_processed_pseudogene KNOWN OTTHUMG00000150378.4 89834 2827 12 ENSG00000183090.5 FREM3 chr4 143577302 143700675 - protein_coding KNOWN OTTHUMG00000161577.1 123374 6869 11 ENSG00000246448.2 RP13-578N3.3 chr4 143700257 143865072 + antisense NOVEL OTTHUMG00000161580.1 164816 566 7 ENSG00000250345.2 RP11-780M14.1 chr4 143760399 143762093 - processed_pseudogene KNOWN OTTHUMG00000161576.2 1695 1171 2 ENSG00000197465.12 GYPE chr4 143870867 143905563 - protein_coding KNOWN OTTHUMG00000161402.1 34697 2004 12 ENSG00000249741.2 RP11-673E1.3 chr4 143911514 143912053 - processed_pseudogene KNOWN OTTHUMG00000161401.2 540 540 1 ENSG00000251600.4 RP11-673E1.1 chr4 143912331 143982454 + lincRNA NOVEL OTTHUMG00000161311.2 70124 1921 15 ENSG00000248828.1 RP11-673E1.4 chr4 143953635 144126359 + antisense NOVEL OTTHUMG00000161400.1 172725 832 5 ENSG00000225447.1 RPS15AP10 chr1 45645816 45646197 - processed_pseudogene KNOWN OTTHUMG00000040992.1 382 382 1 ENSG00000250361.5 GYPB chr4 143996104 144019345 - protein_coding KNOWN OTTHUMG00000161404.3 23242 1566 69 ENSG00000170180.18 GYPA chr4 144109303 144140751 - protein_coding KNOWN OTTHUMG00000161403.2 31449 3512 66 ENSG00000261129.1 RP11-361D14.2 chr4 144505900 144509001 + lincRNA NOVEL OTTHUMG00000176043.1 3102 3102 1 ENSG00000250504.2 KRT18P51 chr4 144572238 144572983 + processed_pseudogene KNOWN OTTHUMG00000161431.2 746 746 1 ENSG00000248890.1 HHIP-AS1 chr4 144642922 144661357 - antisense NOVEL OTTHUMG00000161429.1 18436 1557 9 ENSG00000164161.8 HHIP chr4 144646021 144745271 + protein_coding KNOWN OTTHUMG00000161428.2 99251 12074 41 ENSG00000273621.1 uc_338 chr4 144739762 144739941 - misc_RNA NOVEL NA 180 180 1 ENSG00000249193.1 HSPD1P5 chr4 144845625 144847344 + processed_pseudogene KNOWN OTTHUMG00000161476.1 1720 1720 1 ENSG00000250406.1 RP13-539F13.3 chr4 144851572 144874787 + lincRNA NOVEL OTTHUMG00000161479.1 23216 2807 2 ENSG00000251452.2 RP13-539F13.2 chr4 144920713 144921164 - processed_pseudogene KNOWN OTTHUMG00000161481.2 452 452 1 ENSG00000215790.5 SLC35E2 chr1 1724838 1745992 - protein_coding KNOWN OTTHUMG00000000823.5 21155 3264 16 ENSG00000234329.1 RP11-767N6.2 chr1 45651039 45651826 - processed_pseudogene KNOWN OTTHUMG00000040991.1 788 788 1 ENSG00000164162.11 ANAPC10 chr4 144967112 145098541 - protein_coding KNOWN OTTHUMG00000161477.4 131430 3418 83 ENSG00000222594.1 RN7SKP235 chr4 145035132 145035436 + misc_RNA KNOWN NA 305 305 1 ENSG00000164163.9 ABCE1 chr4 145097932 145129179 + protein_coding KNOWN OTTHUMG00000161478.2 31248 6265 77 ENSG00000164164.14 OTUD4 chr4 145110838 145180161 - protein_coding KNOWN OTTHUMG00000161480.5 69324 9085 114 ENSG00000238713.1 Y_RNA chr4 145149537 145149649 - misc_RNA NOVEL NA 113 113 1 ENSG00000240992.1 RPS23P4 chr4 145269810 145270558 - processed_pseudogene KNOWN OTTHUMG00000157579.1 749 423 2 ENSG00000272727.1 RP11-142A22.4 chr4 145335263 145340421 - lincRNA NOVEL OTTHUMG00000186407.1 5159 1151 4 ENSG00000251333.3 RTN3P1 chr4 145375543 145376253 + processed_pseudogene KNOWN OTTHUMG00000161594.2 711 711 1 ENSG00000278943.1 RP11-142A22.3 chr4 145376909 145377957 + TEC KNOWN OTTHUMG00000176257.2 1049 1049 1 ENSG00000248745.2 NMNAT1P4 chr4 145456005 145456844 + processed_pseudogene KNOWN OTTHUMG00000161593.2 840 840 1 ENSG00000159596.6 TMEM69 chr1 45687214 45694443 + protein_coding KNOWN OTTHUMG00000040993.1 7230 2439 5 ENSG00000170365.8 SMAD1 chr4 145481194 145558079 + protein_coding KNOWN OTTHUMG00000161592.12 76886 6058 52 ENSG00000250582.1 SMAD1-AS2 chr4 145497073 145502971 - antisense NOVEL OTTHUMG00000162185.1 5899 1090 2 ENSG00000250902.1 SMAD1-AS1 chr4 145514615 145517118 - antisense NOVEL OTTHUMG00000162186.1 2504 481 2 ENSG00000248686.1 RP11-557J10.5 chr4 145599109 145600552 + lincRNA NOVEL OTTHUMG00000162184.1 1444 403 2 ENSG00000151611.12 MMAA chr4 145618263 145660035 + protein_coding KNOWN OTTHUMG00000161369.3 41773 7677 26 ENSG00000249245.2 RP11-557J10.3 chr4 145624159 145626035 - processed_pseudogene KNOWN OTTHUMG00000161368.4 1877 1877 1 ENSG00000248356.1 RP11-557J10.4 chr4 145642336 145650624 - antisense NOVEL OTTHUMG00000162183.1 8289 745 2 ENSG00000237136.5 C4orf51 chr4 145680204 145771032 + protein_coding KNOWN OTTHUMG00000161367.2 90829 1036 16 ENSG00000151612.14 ZNF827 chr4 145757627 145938635 - protein_coding KNOWN OTTHUMG00000161362.3 181009 8433 64 ENSG00000279481.1 RP11-181K12.1 chr4 145830456 145832980 - TEC KNOWN OTTHUMG00000161591.1 2525 2525 1 ENSG00000197429.9 IPP chr1 45694324 45750650 - protein_coding KNOWN OTTHUMG00000008004.3 56327 3705 24 ENSG00000251687.1 RP11-181K12.2 chr4 145833118 145839580 + antisense NOVEL OTTHUMG00000162028.1 6463 794 3 ENSG00000201314.1 Y_RNA chr4 145958128 145958240 - misc_RNA NOVEL NA 113 113 1 ENSG00000260303.1 RP11-203B7.2 chr4 146052604 146056762 - lincRNA NOVEL OTTHUMG00000176087.1 4159 4159 1 ENSG00000251024.1 RP11-203B7.1 chr4 146077846 146108157 - lincRNA NOVEL OTTHUMG00000162029.2 30312 522 3 ENSG00000248809.4 LINC01095 chr4 146109455 146121913 - lincRNA NOVEL OTTHUMG00000161439.1 12459 2257 19 ENSG00000216055.1 AC097372.1 chr4 146122204 146122284 - miRNA NOVEL NA 81 81 1 ENSG00000164167.8 LSM6 chr4 146175685 146200000 + protein_coding KNOWN OTTHUMG00000161440.2 24316 2605 24 ENSG00000279845.1 RP11-6L6.4 chr4 146180851 146181316 + TEC KNOWN OTTHUMG00000161590.1 466 466 1 ENSG00000250673.1 RP11-6L6.2 chr4 146224557 146229056 + lincRNA NOVEL OTTHUMG00000161438.3 4500 397 3 ENSG00000280250.1 RP11-6L6.6 chr4 146231892 146232267 + TEC KNOWN OTTHUMG00000161588.1 376 376 1 ENSG00000230896.1 RP11-767N6.7 chr1 45694684 45697075 - sense_intronic NOVEL OTTHUMG00000085067.1 2392 598 2 ENSG00000251010.1 RP11-6L6.7 chr4 146241806 146243669 + antisense NOVEL OTTHUMG00000162030.1 1864 732 2 ENSG00000120519.13 SLC10A7 chr4 146253975 146521964 - protein_coding KNOWN OTTHUMG00000161437.2 267990 6687 59 ENSG00000278438.1 MIR7849 chr4 146408583 146408688 + miRNA KNOWN NA 106 106 1 ENSG00000207182.1 RNU1-44P chr4 146580048 146580210 + snRNA KNOWN NA 163 163 1 ENSG00000151615.3 POU4F2 chr4 146638893 146642474 + protein_coding KNOWN OTTHUMG00000162045.1 3582 3144 2 ENSG00000264323.1 AC093887.1 chr4 146639261 146639343 + miRNA NOVEL NA 83 83 1 ENSG00000137473.16 TTC29 chr4 146706638 146945882 - protein_coding KNOWN OTTHUMG00000162047.4 239245 3332 83 ENSG00000248764.1 RP11-292D4.2 chr4 146934001 146945471 + antisense NOVEL OTTHUMG00000162048.1 11471 524 3 ENSG00000248346.1 RP11-292D4.1 chr4 146957438 146975457 + lincRNA NOVEL OTTHUMG00000162046.1 18020 801 6 ENSG00000260090.1 RP11-292D4.3 chr4 147005492 147009145 + lincRNA NOVEL OTTHUMG00000162098.1 3654 3654 1 ENSG00000236111.5 RP11-630I5.1 chr1 45781277 45781957 + processed_pseudogene KNOWN OTTHUMG00000041627.1 681 681 1 ENSG00000279376.1 RP11-292D4.4 chr4 147025914 147030072 + TEC KNOWN OTTHUMG00000175959.1 4159 4159 1 ENSG00000221369.1 MIR548G chr4 147344629 147344717 - miRNA KNOWN NA 89 89 1 ENSG00000241281.1 RP11-364M6.1 chr4 147425974 147426351 - processed_pseudogene KNOWN OTTHUMG00000157580.1 378 378 1 ENSG00000249004.1 PRMT5P1 chr4 147458724 147459321 - processed_pseudogene KNOWN OTTHUMG00000161356.1 598 598 1 ENSG00000151617.14 EDNRA chr4 147480917 147544954 + protein_coding KNOWN OTTHUMG00000161354.1 64038 4238 40 ENSG00000280219.1 RP11-752L20.3 chr4 147487971 147496062 + TEC KNOWN OTTHUMG00000161357.1 8092 8092 1 ENSG00000251254.1 GTF2F2P1 chr4 147506091 147506765 + processed_pseudogene KNOWN OTTHUMG00000161355.1 675 675 1 ENSG00000251688.1 RP11-752L20.5 chr4 147567606 147594587 + lincRNA NOVEL OTTHUMG00000161359.1 26982 1028 7 ENSG00000251298.1 RP11-425A23.1 chr4 147609552 147617245 - antisense NOVEL OTTHUMG00000161360.1 7694 568 2 ENSG00000164168.6 TMEM184C chr4 147617383 147672044 + protein_coding KNOWN OTTHUMG00000161358.1 54662 4712 26 ENSG00000086015.19 MAST2 chr1 45786987 46036124 + protein_coding KNOWN OTTHUMG00000008007.4 249138 7877 96 ENSG00000164169.11 PRMT9 chr4 147637785 147684230 - protein_coding KNOWN OTTHUMG00000161361.1 46446 4019 31 ENSG00000071205.10 ARHGAP10 chr4 147732063 148072780 + protein_coding KNOWN OTTHUMG00000161460.1 340718 10759 73 ENSG00000252951.1 RNA5SP165 chr4 147745303 147745417 - rRNA KNOWN NA 115 115 1 ENSG00000264274.1 MIR4799 chr4 147782595 147782668 + miRNA KNOWN NA 74 74 1 ENSG00000240014.3 RN7SL254P chr4 147808926 147809209 + misc_RNA KNOWN NA 284 284 1 ENSG00000270387.1 RP11-315D13.1 chr4 147916529 147917386 - processed_pseudogene KNOWN OTTHUMG00000184947.1 858 858 1 ENSG00000151623.13 NR3C2 chr4 148078762 148444698 - protein_coding KNOWN OTTHUMG00000161455.1 365937 6607 60 ENSG00000250354.1 RP11-76G10.1 chr4 148146471 148208880 + antisense NOVEL OTTHUMG00000161459.1 62410 680 3 ENSG00000251418.2 RP11-655B23.1 chr4 148526493 148527139 - processed_pseudogene KNOWN OTTHUMG00000161456.2 647 647 1 ENSG00000201846.1 RNA5SP166 chr4 148557947 148558048 + rRNA KNOWN NA 102 102 1 ENSG00000232467.2 TMA16P2 chr1 45846994 45847594 - processed_pseudogene KNOWN OTTHUMG00000008005.2 601 601 1 ENSG00000250357.1 RP11-503L19.1 chr4 148693032 148694323 + lincRNA NOVEL OTTHUMG00000161457.1 1292 518 2 ENSG00000225176.2 ATP5LP4 chr4 148703526 148703832 - processed_pseudogene KNOWN OTTHUMG00000161453.1 307 307 1 ENSG00000279016.1 RP11-360A10.1 chr4 148819351 148819956 - TEC KNOWN OTTHUMG00000161454.1 606 606 1 ENSG00000249317.1 CTB-191D16.1 chr4 148940941 148942378 - processed_transcript NOVEL OTTHUMG00000161458.1 1438 479 5 ENSG00000239168.1 RNU7-197P chr4 148991572 148991633 - snRNA KNOWN NA 62 62 1 ENSG00000249752.1 RP11-563M4.1 chr4 149027445 149062522 - lincRNA NOVEL OTTHUMG00000161392.1 35078 481 4 ENSG00000250252.1 RP11-342A1.1 chr4 149147802 149149780 - lincRNA NOVEL OTTHUMG00000161390.1 1979 476 2 ENSG00000248210.1 RP11-24I21.1 chr4 149154295 149278123 + lincRNA NOVEL OTTHUMG00000161393.1 123829 2520 13 ENSG00000281875.1 AC097465.1 chr4 149295345 149295480 - miRNA NOVEL NA 136 136 1 ENSG00000234828.6 RP11-526A4.1 chr4 149352017 149896233 - lincRNA NOVEL OTTHUMG00000161394.1 544217 2537 38 ENSG00000117461.13 PIK3R3 chr1 46040140 46133036 - protein_coding KNOWN OTTHUMG00000008096.2 92897 7410 57 ENSG00000250905.1 RP11-707F2.1 chr4 149666057 149711149 + lincRNA NOVEL OTTHUMG00000161396.1 45093 510 3 ENSG00000251482.1 AKIRIN2P1 chr4 149789952 149790303 + processed_pseudogene KNOWN OTTHUMG00000161391.1 352 352 1 ENSG00000202331.1 RNA5SP167 chr4 149907560 149907675 + rRNA KNOWN NA 116 116 1 ENSG00000207121.1 RNU6-1230P chr4 149934376 149934483 + snRNA KNOWN NA 108 108 1 ENSG00000250704.1 RP11-423J7.1 chr4 149956208 149958572 + lincRNA NOVEL OTTHUMG00000161395.1 2365 358 2 ENSG00000170390.13 DCLK2 chr4 150078274 150257457 + protein_coding KNOWN OTTHUMG00000161444.1 179184 4593 69 ENSG00000238721.1 RNU7-194P chr4 150209706 150209768 + snRNA KNOWN NA 63 63 1 ENSG00000198589.9 LRBA chr4 150264531 151015727 - protein_coding KNOWN OTTHUMG00000161443.1 751197 14929 249 ENSG00000248521.1 RP11-174F8.1 chr4 150422645 150423642 - processed_pseudogene KNOWN OTTHUMG00000161450.1 998 998 1 ENSG00000249690.1 RP11-1336O20.2 chr4 150579089 150581545 + antisense NOVEL OTTHUMG00000161447.1 2457 2209 2 ENSG00000278139.1 RP4-533D7.6 chr1 46043661 46176488 - protein_coding PUTATIVE OTTHUMG00000186753.1 132828 1553 10 ENSG00000181541.5 MAB21L2 chr4 150581922 150584693 + protein_coding KNOWN OTTHUMG00000161442.1 2772 2772 1 ENSG00000221235.1 AC110813.1 chr4 150639756 150639866 - miRNA NOVEL NA 111 111 1 ENSG00000183432.6 ZBTB8OSP1 chr4 150720981 150721478 + processed_pseudogene KNOWN OTTHUMG00000161446.1 498 498 1 ENSG00000252451.1 RNA5SP168 chr4 150970671 150970782 - rRNA KNOWN NA 112 112 1 ENSG00000235606.3 AK4P6 chr4 151027090 151027617 + processed_pseudogene KNOWN OTTHUMG00000161449.1 528 528 1 ENSG00000145425.8 RPS3A chr4 151099573 151104652 + protein_coding KNOWN OTTHUMG00000161445.2 5080 2341 71 ENSG00000201264.1 SNORD73 chr4 151102057 151102128 + snoRNA NOVEL NA 72 72 1 ENSG00000109686.15 SH3D19 chr4 151102751 151325632 - protein_coding KNOWN OTTHUMG00000154051.5 222882 7789 141 ENSG00000208797.1 SNORD73A chr4 151103827 151103891 + snoRNA KNOWN NA 65 65 1 ENSG00000270681.1 RP11-372K14.2 chr4 151139991 151141103 + antisense NOVEL OTTHUMG00000161448.1 1113 1113 1 ENSG00000226957.1 RP4-533D7.4 chr1 46046818 46048368 + antisense NOVEL OTTHUMG00000008097.1 1551 649 2 ENSG00000249012.2 RP11-731D1.1 chr4 151259503 151262849 + unprocessed_pseudogene KNOWN OTTHUMG00000161677.1 3347 486 5 ENSG00000189099.10 PRSS48 chr4 151277171 151291453 + protein_coding KNOWN OTTHUMG00000161673.5 14283 989 8 ENSG00000250350.1 RP11-731D1.3 chr4 151279030 151279192 - unprocessed_pseudogene KNOWN OTTHUMG00000161669.1 163 163 1 ENSG00000252544.1 RNU6-1282P chr4 151300518 151300613 + snRNA KNOWN NA 96 96 1 ENSG00000270265.1 RP11-731D1.4 chr4 151333775 151353224 - lincRNA NOVEL OTTHUMG00000185256.1 19450 540 2 ENSG00000251611.1 RP11-610P16.1 chr4 151407551 151408835 - lincRNA NOVEL OTTHUMG00000161670.1 1285 358 2 ENSG00000164142.14 FAM160A1 chr4 151409216 151663632 + protein_coding KNOWN OTTHUMG00000161675.1 254417 4932 49 ENSG00000278056.1 AC097455.1 chr4 151565710 151565810 - miRNA NOVEL NA 101 101 1 ENSG00000253019.1 RN7SKP35 chr4 151576766 151576916 + misc_RNA KNOWN NA 151 151 1 ENSG00000251603.1 RP11-164P12.4 chr4 151667224 151670502 + antisense NOVEL OTTHUMG00000161674.1 3279 304 2 ENSG00000008130.14 NADK chr1 1751232 1780457 - protein_coding KNOWN OTTHUMG00000000942.6 29226 5570 107 ENSG00000233114.2 RP4-533D7.3 chr1 46104950 46105175 + processed_pseudogene KNOWN OTTHUMG00000008095.2 226 226 1 ENSG00000278978.1 RP11-164P12.5 chr4 151669786 151670503 + TEC KNOWN OTTHUMG00000161676.1 718 718 1 ENSG00000059691.10 GATB chr4 151670504 151761023 - protein_coding KNOWN OTTHUMG00000161672.1 90520 11757 98 ENSG00000251455.1 RP11-164P12.3 chr4 151674483 151677893 + antisense NOVEL OTTHUMG00000161671.1 3411 2565 3 ENSG00000249184.1 RP11-424M21.1 chr4 151799500 151801348 + lincRNA NOVEL OTTHUMG00000161740.1 1849 764 3 ENSG00000249708.1 RP11-503L23.1 chr4 151887543 151891263 - lincRNA NOVEL OTTHUMG00000161739.1 3721 406 3 ENSG00000249818.1 RP11-73G16.3 chr4 151904932 151928648 - lincRNA NOVEL OTTHUMG00000161729.1 23717 579 3 ENSG00000248991.1 RP11-73G16.2 chr4 151919468 151943933 + lincRNA NOVEL OTTHUMG00000161726.1 24466 488 4 ENSG00000251249.1 RP11-73G16.1 chr4 151955991 151969381 + processed_transcript NOVEL OTTHUMG00000161725.3 13391 2997 6 ENSG00000253077.1 RNA5SP169 chr4 151971497 151971613 - rRNA KNOWN NA 117 117 1 ENSG00000245954.5 RP11-18H21.1 chr4 152100754 152104720 + lincRNA NOVEL OTTHUMG00000161715.1 3967 2011 8 ENSG00000227857.2 RP4-533D7.5 chr1 46134531 46139081 + antisense NOVEL OTTHUMG00000008098.1 4551 339 2 ENSG00000250706.1 RP11-18H21.2 chr4 152146385 152178573 - lincRNA NOVEL OTTHUMG00000161723.1 32189 552 5 ENSG00000251377.1 RP11-18H21.3 chr4 152207421 152225870 - lincRNA NOVEL OTTHUMG00000161724.1 18450 787 5 ENSG00000266244.1 AC079340.1 chr4 152228468 152228534 + miRNA NOVEL NA 67 67 1 ENSG00000244544.2 RN7SL446P chr4 152264150 152264445 - misc_RNA KNOWN NA 296 296 1 ENSG00000270302.1 RP11-461L13.4 chr4 152308283 152309983 - lincRNA NOVEL OTTHUMG00000185254.1 1701 410 2 ENSG00000270883.1 RP11-461L13.5 chr4 152317902 152318364 - lincRNA NOVEL OTTHUMG00000185259.1 463 463 1 ENSG00000270750.1 RP11-461L13.3 chr4 152320544 152321044 - lincRNA NOVEL OTTHUMG00000185245.1 501 501 1 ENSG00000109670.12 FBXW7 chr4 152321259 152536101 - protein_coding KNOWN OTTHUMG00000185246.1 214843 10287 89 ENSG00000270751.1 DEAR chr4 152337655 152338098 + antisense NOVEL OTTHUMG00000185247.1 444 372 2 ENSG00000264678.1 MIR3140 chr4 152489327 152489416 - miRNA KNOWN NA 90 90 1 ENSG00000117472.8 TSPAN1 chr1 46175073 46185958 + protein_coding KNOWN OTTHUMG00000007602.1 10886 2366 50 ENSG00000268471.4 DKFZP434I0714 chr4 152536264 152539263 + lincRNA NOVEL OTTHUMG00000161466.1 3000 3000 1 ENSG00000277685.1 MIR4453 chr4 152536428 152536516 + miRNA KNOWN NA 89 89 1 ENSG00000243417.1 RP11-555K12.1 chr4 152551277 152552364 - processed_pseudogene KNOWN OTTHUMG00000157584.1 1088 777 2 ENSG00000240669.1 RP11-555K12.2 chr4 152613875 152614333 - processed_pseudogene KNOWN OTTHUMG00000157586.1 459 459 1 ENSG00000170006.10 TMEM154 chr4 152618632 152680165 - protein_coding KNOWN OTTHUMG00000161463.1 61534 11587 19 ENSG00000248571.1 RP11-768B22.2 chr4 152666368 152670107 + antisense NOVEL OTTHUMG00000161462.1 3740 2371 2 ENSG00000164144.13 ARFIP1 chr4 152687727 152918463 + protein_coding KNOWN OTTHUMG00000161468.1 230737 4290 71 ENSG00000169989.2 TIGD4 chr4 152769354 152779764 - protein_coding KNOWN OTTHUMG00000161464.1 10411 2472 2 ENSG00000250980.1 RP11-529H22.1 chr4 152796063 152796831 - processed_pseudogene KNOWN OTTHUMG00000161467.1 769 769 1 ENSG00000252375.1 AC099339.1 chr4 152900966 152901079 + miRNA NOVEL NA 114 114 1 ENSG00000250719.1 RP11-322N21.2 chr1 46175486 46176478 - protein_coding NOVEL OTTHUMG00000007603.2 993 395 2 ENSG00000231841.1 RP11-206F17.2 chr4 152927446 152928207 + processed_pseudogene KNOWN OTTHUMG00000161465.1 762 762 1 ENSG00000137460.7 FHDC1 chr4 152936352 152979696 + protein_coding KNOWN OTTHUMG00000161452.3 43345 6593 23 ENSG00000249022.1 RP11-285C1.2 chr4 153034211 153091165 + lincRNA NOVEL OTTHUMG00000161522.1 56955 562 5 ENSG00000109654.13 TRIM2 chr4 153152342 153339320 + protein_coding KNOWN OTTHUMG00000155991.4 186979 9333 55 ENSG00000252030.1 RNU6-1196P chr4 153265662 153265755 - snRNA KNOWN NA 94 94 1 ENSG00000201786.1 Y_RNA chr4 153266909 153267010 - misc_RNA NOVEL NA 102 102 1 ENSG00000213406.3 ANXA2P1 chr4 153307792 153308717 - processed_pseudogene KNOWN OTTHUMG00000161554.1 926 926 1 ENSG00000121211.6 MND1 chr4 153344649 153415118 + protein_coding KNOWN OTTHUMG00000161523.4 70470 1513 39 ENSG00000263596.1 AC013477.1 chr4 153360533 153360654 + miRNA NOVEL NA 122 122 1 ENSG00000243883.3 RN7SL419P chr4 153381729 153382015 - misc_RNA KNOWN NA 287 287 1 ENSG00000281129.1 AL672043.1 chr1 46178715 46178821 - miRNA NOVEL NA 107 107 1 ENSG00000121210.14 KIAA0922 chr4 153466346 153636711 + protein_coding KNOWN OTTHUMG00000153244.5 170366 6393 118 ENSG00000250771.2 RP11-153M7.3 chr4 153640168 153681180 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000161526.2 41013 3277 4 ENSG00000248208.1 RP11-153M7.1 chr4 153658572 153659653 + processed_pseudogene KNOWN OTTHUMG00000161524.1 1082 1082 1 ENSG00000137462.6 TLR2 chr4 153701500 153705699 + protein_coding KNOWN OTTHUMG00000161525.1 4200 4200 1 ENSG00000145428.13 RNF175 chr4 153710125 153760235 - protein_coding KNOWN OTTHUMG00000161557.10 50111 4390 48 ENSG00000249309.1 RP11-153M7.5 chr4 153720327 153727722 + antisense NOVEL OTTHUMG00000161558.1 7396 521 5 ENSG00000221657.2 AC020703.1 chr4 153741852 153741939 - miRNA NOVEL NA 88 88 1 ENSG00000145423.4 SFRP2 chr4 153780592 153789120 - protein_coding KNOWN OTTHUMG00000161559.2 8529 2032 3 ENSG00000252181.1 AC020703.2 chr4 153873367 153873451 - miRNA NOVEL NA 85 85 1 ENSG00000280241.2 RP11-290O12.2 chr4 154142122 154298819 + antisense NOVEL OTTHUMG00000189143.1 156698 1376 11 ENSG00000085998.12 POMGNT1 chr1 46188682 46220305 - protein_coding KNOWN OTTHUMG00000007604.2 31624 6198 94 ENSG00000264137.1 AC079298.1 chr4 154218909 154218993 + miRNA NOVEL NA 85 85 1 ENSG00000197410.11 DCHS2 chr4 154232037 154491716 - protein_coding KNOWN OTTHUMG00000161556.5 259680 16281 73 ENSG00000278981.1 RP11-9N12.2 chr4 154235980 154237598 + antisense NOVEL OTTHUMG00000189144.1 1619 1619 1 ENSG00000280005.1 RP11-9N12.3 chr4 154261735 154262193 + antisense NOVEL OTTHUMG00000189145.1 459 459 1 ENSG00000249200.1 RP11-290O12.1 chr4 154373886 154374347 + processed_pseudogene KNOWN OTTHUMG00000161555.1 462 462 1 ENSG00000250609.1 RP11-158C21.2 chr4 154523487 154524807 + processed_pseudogene KNOWN OTTHUMG00000161544.1 1321 1022 2 ENSG00000171566.10 PLRG1 chr4 154535006 154550435 - protein_coding KNOWN OTTHUMG00000161411.2 15430 5049 82 ENSG00000200350.1 RNU6-1285P chr4 154543933 154544037 - snRNA KNOWN NA 105 105 1 ENSG00000248611.1 RP11-158C21.3 chr4 154555208 154555985 + processed_pseudogene KNOWN OTTHUMG00000161541.1 778 778 1 ENSG00000171564.10 FGB chr4 154562956 154571086 + protein_coding KNOWN OTTHUMG00000150331.3 8131 2708 35 ENSG00000171357.5 LURAP1 chr1 46203334 46221261 + protein_coding KNOWN OTTHUMG00000007605.1 17928 1854 2 ENSG00000171560.13 FGA chr4 154583126 154590766 - protein_coding KNOWN OTTHUMG00000150330.2 7641 3956 17 ENSG00000171557.15 FGG chr4 154604134 154612967 - protein_coding KNOWN OTTHUMG00000150329.8 8834 3600 77 ENSG00000121207.10 LRAT chr4 154626945 154753118 + protein_coding KNOWN OTTHUMG00000161418.2 126174 7562 27 ENSG00000249074.1 RP11-21G20.1 chr4 154724586 154724880 + processed_pseudogene KNOWN OTTHUMG00000161419.1 295 295 1 ENSG00000249041.1 RP11-21G20.3 chr4 154754756 154781873 - antisense NOVEL OTTHUMG00000161545.1 27118 525 4 ENSG00000249692.1 RP11-21G20.4 chr4 154770568 154770916 + processed_pseudogene KNOWN OTTHUMG00000161542.1 349 349 1 ENSG00000151962.6 RBM46 chr4 154781213 154828813 + protein_coding KNOWN OTTHUMG00000161543.2 47601 4027 19 ENSG00000222582.1 RNU2-66P chr4 154787118 154787278 + snRNA KNOWN NA 161 161 1 ENSG00000252604.1 RNU2-44P chr4 154790291 154790484 + snRNA KNOWN NA 194 194 1 ENSG00000250910.6 AC097467.2 chr4 155173716 155381694 + antisense NOVEL OTTHUMG00000150212.5 207979 5379 181 ENSG00000085999.10 RAD54L chr1 46247688 46278473 + protein_coding KNOWN OTTHUMG00000007772.3 30786 3212 100 ENSG00000250538.4 RP11-92A5.2 chr4 155206529 155209027 - antisense NOVEL OTTHUMG00000161487.1 2499 1634 6 ENSG00000185149.5 NPY2R chr4 155208629 155217078 + protein_coding KNOWN OTTHUMG00000161485.1 8450 3628 4 ENSG00000249924.2 RP11-27G13.1 chr4 155286162 155287136 - lincRNA NOVEL OTTHUMG00000161483.1 975 370 2 ENSG00000164114.17 MAP9 chr4 155342658 155376970 - protein_coding KNOWN OTTHUMG00000133628.4 34313 8857 64 ENSG00000250205.1 YWHAEP4 chr4 155381042 155381239 - processed_pseudogene KNOWN OTTHUMG00000161482.1 198 198 1 ENSG00000250398.1 RP11-27G13.4 chr4 155383107 155384102 - processed_pseudogene KNOWN OTTHUMG00000161484.1 996 346 2 ENSG00000271606.1 RP11-27G13.5 chr4 155385352 155385492 + unprocessed_pseudogene KNOWN OTTHUMG00000184999.1 141 141 1 ENSG00000249247.1 RP11-627H22.9 chr4 155451617 155452405 - unprocessed_pseudogene KNOWN OTTHUMG00000161820.1 789 789 1 ENSG00000249770.1 MTND6P17 chr4 155452526 155453044 + unprocessed_pseudogene KNOWN OTTHUMG00000161806.1 519 519 1 ENSG00000248748.1 MTND5P9 chr4 155453049 155454803 - unprocessed_pseudogene KNOWN OTTHUMG00000161699.2 1755 1755 1 ENSG00000132128.15 LRRC41 chr1 46261196 46303608 - protein_coding KNOWN OTTHUMG00000007810.7 42413 8606 60 ENSG00000248548.1 MTND4P8 chr4 155455050 155456411 - unprocessed_pseudogene KNOWN OTTHUMG00000161821.1 1362 1362 1 ENSG00000249127.1 MTND3P3 chr4 155456638 155456981 - unprocessed_pseudogene KNOWN OTTHUMG00000161926.1 344 126 2 ENSG00000249698.1 RP11-627H22.8 chr4 155457180 155457960 - unprocessed_pseudogene KNOWN OTTHUMG00000161819.1 781 781 1 ENSG00000248420.1 MTATP6P9 chr4 155457961 155458640 - unprocessed_pseudogene KNOWN OTTHUMG00000161818.1 680 680 1 ENSG00000249386.1 RP11-627H22.6 chr4 155458870 155459563 - unprocessed_pseudogene KNOWN OTTHUMG00000161814.1 694 694 1 ENSG00000251223.1 RP11-627H22.5 chr4 155459704 155461237 - unprocessed_pseudogene KNOWN OTTHUMG00000161811.1 1534 1534 1 ENSG00000248907.1 MTND2P33 chr4 155461633 155462663 - unprocessed_pseudogene KNOWN OTTHUMG00000161812.1 1031 1031 1 ENSG00000251407.1 MTND1P22 chr4 155462873 155463823 - unprocessed_pseudogene KNOWN OTTHUMG00000161807.1 951 951 1 ENSG00000251244.1 RP13-487K5.1 chr4 155515727 155517459 + lincRNA NOVEL OTTHUMG00000161799.1 1733 519 2 ENSG00000164116.15 GUCY1A3 chr4 155666711 155732349 + protein_coding KNOWN OTTHUMG00000161700.3 65639 5766 114 ENSG00000173660.10 UQCRH chr1 46303631 46316776 + protein_coding KNOWN OTTHUMG00000007813.3 13146 1408 17 ENSG00000260244.1 RP11-588K22.2 chr4 155734448 155737062 + sense_overlapping NOVEL OTTHUMG00000175885.1 2615 2615 1 ENSG00000061918.11 GUCY1B3 chr4 155758992 155807591 + protein_coding KNOWN OTTHUMG00000161698.17 48600 3724 100 ENSG00000256394.2 ASIC5 chr4 155829729 155866273 - protein_coding KNOWN OTTHUMG00000161941.1 36545 1692 10 ENSG00000151790.7 TDO2 chr4 155854738 155920406 + protein_coding KNOWN OTTHUMG00000161838.4 65669 5264 54 ENSG00000256043.2 CTSO chr4 155924118 155953917 - protein_coding KNOWN OTTHUMG00000161942.3 29800 2954 8 ENSG00000249013.1 FTH1P21 chr4 156006478 156006988 + processed_pseudogene KNOWN OTTHUMG00000161779.1 511 511 1 ENSG00000221189.1 AC108211.1 chr4 156296561 156296646 - miRNA NOVEL NA 86 86 1 ENSG00000251511.1 RP11-171N4.1 chr4 156585979 156590039 + lincRNA NOVEL OTTHUMG00000161776.1 4061 993 2 ENSG00000251283.1 RP11-171N4.2 chr4 156634494 156642454 - lincRNA NOVEL OTTHUMG00000161775.1 7961 607 5 ENSG00000249479.1 RP11-171N4.3 chr4 156642580 156643569 + antisense NOVEL OTTHUMG00000161777.1 990 175 2 ENSG00000078369.16 GNB1 chr1 1785285 1891117 - protein_coding KNOWN OTTHUMG00000000940.7 105833 6417 70 ENSG00000117481.9 NSUN4 chr1 46340177 46365152 + protein_coding KNOWN OTTHUMG00000007808.4 24976 8468 43 ENSG00000248912.1 RP11-171N4.4 chr4 156686664 156692636 + lincRNA NOVEL OTTHUMG00000161780.1 5973 947 2 ENSG00000145431.9 PDGFC chr4 156760454 156971394 - protein_coding KNOWN OTTHUMG00000161803.3 210941 5593 45 ENSG00000248629.1 RP11-154F14.2 chr4 156841359 156842236 + antisense NOVEL OTTHUMG00000161802.1 878 267 2 ENSG00000280284.1 RP11-154F14.3 chr4 156876435 156876820 + TEC KNOWN OTTHUMG00000161804.1 386 386 1 ENSG00000278880.1 RP11-612J15.1 chr4 156886645 156886862 + TEC KNOWN OTTHUMG00000161801.1 218 218 1 ENSG00000250622.1 RP11-612J15.3 chr4 156972631 156972956 + processed_pseudogene KNOWN OTTHUMG00000161805.1 326 326 1 ENSG00000252350.1 RPPH1-3P chr4 156986372 156986693 - ribozyme KNOWN NA 322 322 1 ENSG00000252524.1 Y_RNA chr4 157064557 157064663 + misc_RNA NOVEL NA 107 107 1 ENSG00000109738.9 GLRB chr4 157076057 157172090 + protein_coding KNOWN OTTHUMG00000161954.1 96034 3459 50 ENSG00000199859.1 RNU6-582P chr4 157201562 157201668 - snRNA KNOWN NA 107 107 1 ENSG00000225779.1 RP4-603I14.3 chr1 46370586 46370955 + processed_pseudogene KNOWN OTTHUMG00000007809.1 370 370 1 ENSG00000120251.17 GRIA2 chr4 157204182 157366075 + protein_coding KNOWN OTTHUMG00000133836.2 161894 8941 122 ENSG00000249819.1 RP11-392C20.1 chr4 157204462 157204855 - processed_pseudogene KNOWN OTTHUMG00000161953.1 394 394 1 ENSG00000263738.2 AC079233.1 chr4 157360144 157360198 + miRNA NOVEL NA 55 55 1 ENSG00000234111.5 RP11-364P22.1 chr4 157572490 157576154 + lincRNA NOVEL OTTHUMG00000161533.1 3665 1493 8 ENSG00000221618.1 AC093817.1 chr4 157588148 157588235 - miRNA NOVEL NA 88 88 1 ENSG00000249275.1 RP11-364P22.2 chr4 157637687 157667044 + lincRNA NOVEL OTTHUMG00000161532.1 29358 812 2 ENSG00000200521.1 Y_RNA chr4 157768013 157768113 - misc_RNA NOVEL NA 101 101 1 ENSG00000249627.1 RP11-312A15.1 chr4 157815010 157815480 + processed_pseudogene KNOWN OTTHUMG00000161534.1 471 471 1 ENSG00000279703.1 RP11-364P22.3 chr4 157818101 157818572 - TEC KNOWN OTTHUMG00000161535.1 472 472 1 ENSG00000279994.1 RP11-312A15.2 chr4 157945817 157946642 - TEC KNOWN OTTHUMG00000161531.1 826 826 1 ENSG00000117480.14 FAAH chr1 46394265 46413848 + protein_coding KNOWN OTTHUMG00000007811.2 19584 2776 43 ENSG00000250475.1 RP11-312A15.3 chr4 157968412 157969615 - unprocessed_pseudogene KNOWN OTTHUMG00000161529.1 1204 890 2 ENSG00000279139.1 RP11-597D13.1 chr4 158109500 158110153 - TEC KNOWN OTTHUMG00000161536.1 654 654 1 ENSG00000280140.1 RP11-597D13.2 chr4 158111361 158111931 - TEC KNOWN OTTHUMG00000161530.1 571 571 1 ENSG00000164125.14 FAM198B chr4 158124474 158173318 - protein_coding KNOWN OTTHUMG00000161537.2 48845 7880 34 ENSG00000248429.4 RP11-597D13.9 chr4 158170752 158202877 + antisense NOVEL OTTHUMG00000161654.6 32126 5639 21 ENSG00000251073.1 NUDT19P5 chr4 158182825 158183393 + processed_pseudogene KNOWN OTTHUMG00000162011.1 569 569 1 ENSG00000250604.1 RP11-597D13.8 chr4 158199105 158200442 - antisense NOVEL OTTHUMG00000162012.1 1338 365 2 ENSG00000164124.9 TMEM144 chr4 158201604 158255411 + protein_coding KNOWN OTTHUMG00000162013.5 53808 9243 98 ENSG00000251429.1 RP11-597D13.7 chr4 158270378 158278676 + transcribed_processed_pseudogene KNOWN OTTHUMG00000161655.1 8299 3616 6 ENSG00000171509.14 RXFP1 chr4 158315311 158653372 + protein_coding KNOWN OTTHUMG00000149973.4 338062 5684 164 ENSG00000232022.5 FAAHP1 chr1 46432129 46445521 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000007812.3 13393 1914 26 ENSG00000199634.1 RNU4-79P chr4 158395394 158395534 + snRNA KNOWN NA 141 141 1 ENSG00000248387.1 RP11-781M16.1 chr4 158469586 158470702 + processed_pseudogene KNOWN OTTHUMG00000161521.1 1117 652 2 ENSG00000249901.1 RP11-781M16.2 chr4 158490766 158509908 - antisense NOVEL OTTHUMG00000161685.1 19143 659 3 ENSG00000205208.4 C4orf46 chr4 158666679 158672255 - protein_coding KNOWN OTTHUMG00000161919.2 5577 3730 6 ENSG00000171503.10 ETFDH chr4 158672125 158709623 + protein_coding KNOWN OTTHUMG00000161684.5 37499 4493 47 ENSG00000271817.2 U3 chr4 158700691 158700909 + snoRNA NOVEL NA 219 219 1 ENSG00000171497.4 PPID chr4 158709134 158723396 - protein_coding KNOWN OTTHUMG00000161927.3 14263 2509 19 ENSG00000052795.11 FNIP2 chr4 158769138 158908049 + protein_coding KNOWN OTTHUMG00000161983.3 138912 10868 49 ENSG00000206703.1 RNU6-128P chr4 158794590 158794696 - snRNA KNOWN NA 107 107 1 ENSG00000164123.6 C4orf45 chr4 158893134 159038760 - protein_coding KNOWN OTTHUMG00000161988.2 145627 1438 12 ENSG00000273854.1 AL137797.1 chr1 46435525 46435607 - miRNA NOVEL NA 83 83 1 ENSG00000274535.1 SNORD39 chr4 158909373 158909450 - snoRNA NOVEL NA 78 78 1 ENSG00000221314.1 AC093700.1 chr4 159000146 159000290 - miRNA NOVEL NA 145 145 1 ENSG00000248988.1 RP11-815N9.2 chr4 159007119 159007835 + processed_pseudogene KNOWN OTTHUMG00000161987.1 717 717 1 ENSG00000249367.1 FABP5P12 chr4 159026139 159026527 + processed_pseudogene KNOWN OTTHUMG00000161989.1 389 389 1 ENSG00000206978.1 Y_RNA chr4 159064297 159064398 - misc_RNA NOVEL NA 102 102 1 ENSG00000109756.7 RAPGEF2 chr4 159104178 159360169 + protein_coding KNOWN OTTHUMG00000161451.4 255992 12005 77 ENSG00000264105.1 MIR3688-1 chr4 159128802 159128894 - miRNA KNOWN NA 93 93 1 ENSG00000248552.1 RP11-138A23.1 chr4 159375099 159375322 - processed_pseudogene KNOWN OTTHUMG00000161435.1 224 224 1 ENSG00000250180.1 RP11-138A23.2 chr4 159398533 159401246 + lincRNA NOVEL OTTHUMG00000161436.1 2714 565 2 ENSG00000250488.1 RP11-6C14.1 chr4 159666503 159777784 - lincRNA NOVEL OTTHUMG00000161434.1 111282 358 3 ENSG00000224863.1 LINC01398 chr1 46446673 46449704 - lincRNA NOVEL OTTHUMG00000007814.1 3032 1129 3 ENSG00000274246.1 AC097466.1 chr4 159722801 159722885 - miRNA NOVEL NA 85 85 1 ENSG00000250997.1 RP11-502M1.1 chr4 160521829 160522311 - processed_pseudogene KNOWN OTTHUMG00000161423.1 483 483 1 ENSG00000249425.1 RP11-502M1.2 chr4 160539254 160586817 + lincRNA NOVEL OTTHUMG00000161427.1 47564 1417 5 ENSG00000242635.2 RPS14P7 chr4 160818422 160818869 + processed_pseudogene KNOWN OTTHUMG00000157592.2 448 448 1 ENSG00000221362.1 AC106860.1 chr4 161003877 161003958 - miRNA NOVEL NA 82 82 1 ENSG00000249568.1 RP11-234O6.2 chr4 161378953 161388417 + antisense NOVEL OTTHUMG00000161417.1 9465 2840 2 ENSG00000168843.12 FSTL5 chr4 161383897 162164035 - protein_coding KNOWN OTTHUMG00000161397.5 780139 5355 54 ENSG00000249419.1 RP11-497K21.1 chr4 162022733 162047567 + antisense NOVEL OTTHUMG00000161416.1 24835 1105 6 ENSG00000251253.1 MTHFD2P4 chr4 162322188 162323907 + processed_pseudogene KNOWN OTTHUMG00000161389.2 1720 1025 3 ENSG00000248396.1 TOMM22P4 chr4 162521682 162522041 + processed_pseudogene KNOWN OTTHUMG00000161382.1 360 336 2 ENSG00000225667.1 LINC00505 chr1 46455823 46482475 + lincRNA NOVEL OTTHUMG00000007985.1 26653 354 2 ENSG00000274761.1 AC005150.3 chr4 162709588 162709655 - miRNA NOVEL NA 68 68 1 ENSG00000248431.1 AC005150.1 chr4 162740668 162742048 + lincRNA NOVEL OTTHUMG00000161384.1 1381 628 2 ENSG00000273556.1 AC005150.2 chr4 162742591 162742677 - miRNA NOVEL NA 87 87 1 ENSG00000281116.1 AC021134.1 chr4 162858257 162858393 - miRNA NOVEL NA 137 137 1 ENSG00000251123.1 RP11-580J4.1 chr4 162984795 162985416 + processed_pseudogene KNOWN OTTHUMG00000161351.1 622 622 1 ENSG00000250027.1 RP11-563E2.2 chr4 163108785 163119965 + antisense NOVEL OTTHUMG00000161378.1 11181 777 5 ENSG00000145414.7 NAF1 chr4 163110073 163166921 - protein_coding KNOWN OTTHUMG00000161370.3 56849 4808 32 ENSG00000250547.1 RP11-719L21.1 chr4 163265575 163266583 - processed_pseudogene KNOWN OTTHUMG00000161352.1 1009 1009 1 ENSG00000164128.5 NPY1R chr4 163323961 163344832 - protein_coding KNOWN OTTHUMG00000161371.1 20872 4180 22 ENSG00000164129.10 NPY5R chr4 163343939 163351934 + protein_coding KNOWN OTTHUMG00000161353.2 7996 3291 9 ENSG00000197587.9 DMBX1 chr1 46506996 46514226 + protein_coding KNOWN OTTHUMG00000007982.2 7231 2896 8 ENSG00000227283.1 RPL35AP12 chr4 163382179 163382516 + processed_pseudogene KNOWN OTTHUMG00000155271.1 338 338 1 ENSG00000151005.4 TKTL2 chr4 163471093 163473746 - protein_coding KNOWN OTTHUMG00000161527.1 2654 2654 1 ENSG00000198498.8 TMA16 chr4 163494442 163520539 + protein_coding KNOWN OTTHUMG00000161528.1 26098 3513 48 ENSG00000264535.1 AC093788.1 chr4 163523292 163523386 + miRNA NOVEL NA 95 95 1 ENSG00000145416.12 MARCH1 chr4 163524298 164384050 - protein_coding KNOWN OTTHUMG00000161204.4 859753 10421 69 ENSG00000273449.1 RP11-218F10.3 chr4 163529771 163530697 + lincRNA NOVEL OTTHUMG00000186411.1 927 927 1 ENSG00000253001.1 RN7SKP105 chr4 163828800 163829113 - misc_RNA KNOWN NA 314 314 1 ENSG00000177803.7 RP11-606P2.1 chr4 163932526 163933182 + processed_pseudogene KNOWN OTTHUMG00000161473.1 657 657 1 ENSG00000250746.1 RP11-39C10.1 chr4 164188311 164190367 + processed_pseudogene KNOWN OTTHUMG00000161203.1 2057 2057 1 ENSG00000248546.3 ANP32C chr4 164197007 164197711 - processed_pseudogene KNOWN OTTHUMG00000161205.1 705 705 1 ENSG00000269956.1 MKNK1-AS1 chr1 46538696 46570255 + antisense KNOWN OTTHUMG00000184075.1 31560 2445 8 ENSG00000251162.1 RP11-75A5.1 chr4 164597719 164597976 + processed_pseudogene KNOWN OTTHUMG00000161206.1 258 258 1 ENSG00000223037.1 RNU6-284P chr4 164620732 164620837 + snRNA KNOWN NA 106 106 1 ENSG00000248162.1 RP11-294O2.1 chr4 164725310 164726706 + processed_pseudogene KNOWN OTTHUMG00000161267.1 1397 1397 1 ENSG00000248771.4 LINC01207 chr4 164754064 164803795 + lincRNA NOVEL OTTHUMG00000161261.1 49732 3190 7 ENSG00000201050.1 RNU6-668P chr4 164787290 164787396 + snRNA KNOWN NA 107 107 1 ENSG00000248329.4 APELA chr4 164877004 164898965 + protein_coding NOVEL OTTHUMG00000161255.3 21962 3089 15 ENSG00000250227.1 TRIM60P14 chr4 164915565 164916983 + processed_pseudogene KNOWN OTTHUMG00000161253.1 1419 1419 1 ENSG00000244146.1 RP11-366M4.2 chr4 164920618 164921063 - processed_pseudogene KNOWN OTTHUMG00000157596.1 446 446 1 ENSG00000221891.2 FAM218BP chr4 164929494 164929951 - processed_pseudogene KNOWN OTTHUMG00000161269.1 458 458 1 ENSG00000270960.1 RP11-366M4.18 chr4 164933086 164933506 - processed_pseudogene KNOWN OTTHUMG00000184959.1 421 421 1 ENSG00000162456.8 KNCN chr1 46545644 46551527 - protein_coding KNOWN OTTHUMG00000007987.3 5884 2810 13 ENSG00000248645.1 RP11-366M4.6 chr4 164938322 164939990 - unprocessed_pseudogene KNOWN OTTHUMG00000161260.1 1669 1346 2 ENSG00000121089.4 NACA3P chr4 164943290 164943937 + processed_pseudogene KNOWN OTTHUMG00000161263.1 648 648 1 ENSG00000236941.6 RP11-366M4.8 chr4 164948079 164949438 + processed_pseudogene KNOWN OTTHUMG00000161264.1 1360 1360 1 ENSG00000183439.6 TRIM61 chr4 164954446 164977668 - protein_coding KNOWN OTTHUMG00000161266.1 23223 1582 7 ENSG00000250486.3 FAM218A chr4 164956948 164959122 + protein_coding KNOWN OTTHUMG00000161252.1 2175 2175 1 ENSG00000248632.1 RP11-366M4.11 chr4 164968587 164970002 - processed_pseudogene KNOWN OTTHUMG00000161270.1 1416 1416 1 ENSG00000248229.1 RP11-366M4.12 chr4 164987265 164987787 + processed_pseudogene KNOWN OTTHUMG00000161268.1 523 523 1 ENSG00000250887.1 RP11-366M4.13 chr4 165007086 165007959 - lincRNA NOVEL OTTHUMG00000161256.1 874 747 2 ENSG00000250712.1 RP11-366M4.14 chr4 165010459 165011851 + processed_pseudogene KNOWN OTTHUMG00000161259.1 1393 1393 1 ENSG00000240674.1 RP11-366M4.1 chr4 165012366 165012845 - processed_pseudogene KNOWN OTTHUMG00000157594.1 480 480 1 ENSG00000239906.1 RP11-34P13.14 chr1 139790 140339 - antisense NOVEL OTTHUMG00000002481.1 550 323 2 ENSG00000231050.1 RP1-140A9.1 chr1 1891471 1892658 + antisense NOVEL OTTHUMG00000000941.1 1188 906 2 ENSG00000079277.18 MKNK1 chr1 46557408 46616843 - protein_coding KNOWN OTTHUMG00000007983.4 59436 8070 178 ENSG00000276623.1 RP11-366M4.19 chr4 165016887 165017433 + processed_pseudogene KNOWN OTTHUMG00000187585.1 547 547 1 ENSG00000250430.1 RP11-366M4.15 chr4 165026261 165026944 - processed_pseudogene KNOWN OTTHUMG00000161258.1 684 684 1 ENSG00000176979.11 TRIM60 chr4 165031953 165041744 + protein_coding KNOWN OTTHUMG00000161262.1 9792 2082 10 ENSG00000249617.1 RP11-366M4.17 chr4 165045969 165046280 + processed_pseudogene KNOWN OTTHUMG00000161265.1 312 312 1 ENSG00000250374.3 TRIM75P chr4 165059148 165060554 + processed_pseudogene KNOWN OTTHUMG00000161257.1 1407 1407 1 ENSG00000170088.12 TMEM192 chr4 165070608 165208549 - protein_coding KNOWN OTTHUMG00000161254.7 137942 10241 19 ENSG00000109466.12 KLHL2 chr4 165207618 165323156 + protein_coding KNOWN OTTHUMG00000161294.2 115539 3872 111 ENSG00000200974.1 RNU4-87P chr4 165252580 165252661 + snRNA KNOWN NA 82 82 1 ENSG00000229894.3 RP11-668G10.2 chr4 165277984 165279645 - processed_pseudogene KNOWN OTTHUMG00000161293.1 1662 1662 1 ENSG00000052802.11 MSMO1 chr4 165327623 165343160 + protein_coding KNOWN OTTHUMG00000161126.5 15538 2892 23 ENSG00000142961.13 MOB3C chr1 46607715 46616891 - protein_coding KNOWN OTTHUMG00000007989.2 9177 5916 14 ENSG00000109472.12 CPE chr4 165361194 165498320 + protein_coding KNOWN OTTHUMG00000150252.2 137127 2958 24 ENSG00000207559.1 MIR578 chr4 165386242 165386337 + miRNA KNOWN NA 96 96 1 ENSG00000251596.1 HADHAP1 chr4 165404067 165406350 - processed_pseudogene KNOWN OTTHUMG00000161127.1 2284 2284 1 ENSG00000248287.1 SCGB1D5P chr4 165517255 165517501 - processed_pseudogene KNOWN OTTHUMG00000161129.1 247 247 1 ENSG00000248327.1 NOL8P1 chr4 165547532 165551060 - processed_pseudogene KNOWN OTTHUMG00000161128.1 3529 3529 1 ENSG00000250725.2 RP11-511B7.1 chr4 165664350 165665671 + processed_pseudogene KNOWN OTTHUMG00000161099.2 1322 1045 3 ENSG00000249500.1 LINC01179 chr4 165684639 165762778 + lincRNA NOVEL OTTHUMG00000161098.1 78140 2163 6 ENSG00000038295.6 TLL1 chr4 165873258 166103895 + protein_coding KNOWN OTTHUMG00000161112.3 230638 7522 83 ENSG00000252959.1 RNA5SP170 chr4 166053187 166053287 - rRNA KNOWN NA 101 101 1 ENSG00000266254.1 AC093874.1 chr4 166227765 166227832 + miRNA NOVEL NA 68 68 1 ENSG00000123472.11 ATPAF1 chr1 46632737 46673867 - protein_coding KNOWN OTTHUMG00000007988.4 41131 5677 98 ENSG00000206711.1 Y_RNA chr4 166312935 166313034 - misc_RNA NOVEL NA 100 100 1 ENSG00000249675.1 RP11-217C7.1 chr4 166388701 166526119 - lincRNA NOVEL OTTHUMG00000161810.1 137419 934 4 ENSG00000196104.9 SPOCK3 chr4 166733384 167234796 - protein_coding KNOWN OTTHUMG00000161190.2 501413 4482 230 ENSG00000212373.1 RNA5SP171 chr4 166918364 166918478 - rRNA KNOWN NA 115 115 1 ENSG00000275159.1 AC010103.1 chr4 166981301 166981386 - miRNA NOVEL NA 86 86 1 ENSG00000250150.1 RP11-436A7.1 chr4 167306910 167308789 - lincRNA NOVEL OTTHUMG00000161192.1 1880 589 3 ENSG00000240772.3 RN7SL776P chr4 167400495 167400762 - misc_RNA KNOWN NA 268 268 1 ENSG00000248913.1 PHBP14 chr4 167648430 167648796 + processed_pseudogene KNOWN OTTHUMG00000161191.1 367 367 1 ENSG00000222721.1 RN7SKP188 chr4 167662986 167663302 + misc_RNA KNOWN NA 317 317 1 ENSG00000270336.1 RP11-521F1.1 chr4 167741879 167742287 - processed_pseudogene KNOWN OTTHUMG00000184963.1 409 409 1 ENSG00000233647.2 NENFP1 chr1 46665910 46666375 - processed_pseudogene KNOWN OTTHUMG00000007990.2 466 466 1 ENSG00000248601.1 RP11-310I9.1 chr4 167946674 168113331 - antisense NOVEL OTTHUMG00000161276.2 166658 447 4 ENSG00000109511.9 ANXA10 chr4 168092515 168187690 + protein_coding KNOWN OTTHUMG00000161275.2 95176 1812 36 ENSG00000137628.15 DDX60 chr4 168216293 168318807 - protein_coding KNOWN OTTHUMG00000161350.1 102515 6750 61 ENSG00000181381.12 DDX60L chr4 168356735 168537786 - protein_coding KNOWN OTTHUMG00000161412.3 181052 12156 187 ENSG00000207171.1 SNORA51 chr4 168471409 168471539 + snoRNA NOVEL NA 131 131 1 ENSG00000129116.16 PALLD chr4 168497066 168928457 + protein_coding KNOWN OTTHUMG00000161097.8 431392 10114 137 ENSG00000229226.3 BTF3L4P4 chr4 168598240 168598757 - processed_pseudogene KNOWN OTTHUMG00000161472.1 518 449 2 ENSG00000249623.1 RP11-610J23.1 chr4 168647896 168648587 - antisense NOVEL OTTHUMG00000161279.1 692 448 3 ENSG00000206613.1 RNU6-1336P chr4 168686608 168686716 - snRNA KNOWN NA 109 109 1 ENSG00000214676.4 RPL9P16 chr4 168755816 168756382 + processed_pseudogene KNOWN OTTHUMG00000157599.1 567 567 1 ENSG00000186118.8 TEX38 chr1 46668855 46673594 + protein_coding KNOWN OTTHUMG00000007991.2 4740 1490 8 ENSG00000249609.1 RP11-635L1.3 chr4 168828919 168832937 - antisense NOVEL OTTHUMG00000161489.1 4019 552 2 ENSG00000279384.1 RP11-635L1.2 chr4 168843988 168844735 + TEC KNOWN OTTHUMG00000161490.1 748 748 1 ENSG00000145439.10 CBR4 chr4 168863770 169010275 - protein_coding KNOWN OTTHUMG00000161025.4 146506 5110 31 ENSG00000201176.1 RNU6-853P chr4 168885355 168885461 + snRNA KNOWN NA 107 107 1 ENSG00000201818.1 RNY4P17 chr4 169005249 169005344 + misc_RNA KNOWN NA 96 96 1 ENSG00000251445.1 RP11-483A20.3 chr4 169010430 169010939 + antisense NOVEL OTTHUMG00000161027.1 510 183 2 ENSG00000154447.13 SH3RF1 chr4 169094256 169271105 - protein_coding KNOWN OTTHUMG00000161010.3 176850 5624 33 ENSG00000214671.4 RPL6P12 chr4 169166272 169167117 + processed_pseudogene KNOWN OTTHUMG00000157602.1 846 846 1 ENSG00000251171.1 RP11-327O17.2 chr4 169201794 169220349 + antisense NOVEL OTTHUMG00000161024.1 18556 637 5 ENSG00000137601.14 NEK1 chr4 169393275 169612629 - protein_coding KNOWN OTTHUMG00000160963.4 219355 7755 196 ENSG00000228237.4 EFCAB14-AS1 chr1 46674036 46692098 + antisense NOVEL OTTHUMG00000007993.1 18063 584 7 ENSG00000109572.12 CLCN3 chr4 169612633 169723673 + protein_coding KNOWN OTTHUMG00000160973.3 111041 8123 94 ENSG00000056050.6 C4orf27 chr4 169729465 169757953 - protein_coding KNOWN OTTHUMG00000160960.1 28489 1436 13 ENSG00000264713.1 AC106878.1 chr4 169785194 169785280 - miRNA NOVEL NA 87 87 1 ENSG00000229204.3 PTGES3P3 chr4 169791221 169791702 - processed_pseudogene KNOWN OTTHUMG00000160905.1 482 482 1 ENSG00000248625.1 RP11-205M3.1 chr4 169832653 169833363 + processed_pseudogene KNOWN OTTHUMG00000160904.2 711 711 1 ENSG00000248319.1 RP11-205M3.3 chr4 169917761 169975902 - lincRNA NOVEL OTTHUMG00000160949.2 58142 4365 5 ENSG00000278584.1 AC079768.1 chr4 169924288 169924339 - miRNA NOVEL NA 52 52 1 ENSG00000251200.1 RP11-6E9.5 chr4 169945981 169963334 + antisense NOVEL OTTHUMG00000160948.1 17354 449 2 ENSG00000249955.1 RP11-6E9.4 chr4 169981747 169993806 + antisense NOVEL OTTHUMG00000160946.1 12060 554 3 ENSG00000198948.10 MFAP3L chr4 169986597 170033031 - protein_coding KNOWN OTTHUMG00000160942.7 46435 8741 30 ENSG00000159658.9 EFCAB14 chr1 46675159 46719064 - protein_coding KNOWN OTTHUMG00000007992.4 43906 6285 34 ENSG00000109576.12 AADAT chr4 170060222 170091699 - protein_coding KNOWN OTTHUMG00000160912.3 31478 2981 79 ENSG00000248822.1 APOBEC3AP1 chr4 170099818 170100104 + processed_pseudogene KNOWN OTTHUMG00000160902.1 287 287 1 ENSG00000248739.1 RP11-654F3.1 chr4 170141292 170142532 - processed_pseudogene KNOWN OTTHUMG00000160892.1 1241 843 2 ENSG00000250266.1 RP11-789C1.1 chr4 170273919 170283079 + lincRNA NOVEL OTTHUMG00000160893.1 9161 469 3 ENSG00000251061.2 RP11-789C1.2 chr4 170343089 170372311 + lincRNA NOVEL OTTHUMG00000160896.2 29223 429 3 ENSG00000250082.1 RP11-796L2.1 chr4 170481695 170482195 - processed_pseudogene KNOWN OTTHUMG00000160891.1 501 501 1 ENSG00000181359.5 HSP90AA6P chr4 170581470 170605450 - transcribed_processed_pseudogene KNOWN OTTHUMG00000160882.2 23981 853 3 ENSG00000250968.1 RP11-322J23.1 chr4 170742469 170743718 - lincRNA NOVEL OTTHUMG00000160872.1 1250 614 2 ENSG00000249943.1 RP11-213L8.1 chr4 170814339 170814548 - processed_pseudogene KNOWN OTTHUMG00000160873.2 210 210 1 ENSG00000251961.1 RNU6ATAC13P chr4 170891467 170891597 + snRNA KNOWN NA 131 131 1 ENSG00000236476.2 RP11-8J9.5 chr1 46742329 46743133 + processed_pseudogene KNOWN OTTHUMG00000007994.2 805 805 1 ENSG00000248872.1 RP11-344G13.1 chr4 171040602 171059163 + lincRNA NOVEL OTTHUMG00000160875.1 18562 3632 8 ENSG00000249525.1 RP11-344G13.2 chr4 171113789 171114581 + processed_pseudogene KNOWN OTTHUMG00000160874.1 793 583 2 ENSG00000248755.1 RP11-384D10.1 chr4 171169209 171169942 - processed_pseudogene KNOWN OTTHUMG00000160878.1 734 734 1 ENSG00000278502.1 MIR6082 chr4 171186184 171186292 + miRNA KNOWN NA 109 109 1 ENSG00000248339.1 RP11-717H13.1 chr4 171289475 171298267 - lincRNA NOVEL OTTHUMG00000161813.2 8793 4949 2 ENSG00000251176.1 RP11-97E7.1 chr4 171553000 171564267 - lincRNA NOVEL OTTHUMG00000160879.1 11268 404 3 ENSG00000249297.1 RP11-97E7.2 chr4 171602683 171638763 - lincRNA NOVEL OTTHUMG00000160881.2 36081 553 5 ENSG00000174473.14 GALNTL6 chr4 171812254 173041559 + protein_coding KNOWN OTTHUMG00000160807.2 1229306 9242 47 ENSG00000248637.1 RP11-485C11.1 chr4 172380028 172380487 - processed_pseudogene KNOWN OTTHUMG00000160806.1 460 460 1 ENSG00000245213.5 RP11-10K16.1 chr4 173131928 173169652 - antisense NOVEL OTTHUMG00000160808.1 37725 3367 15 ENSG00000142973.11 CYP4B1 chr1 46757838 46819413 + protein_coding KNOWN OTTHUMG00000007984.6 61576 3460 116 ENSG00000241652.3 RN7SL253P chr4 173141643 173141938 + misc_RNA KNOWN NA 296 296 1 ENSG00000109586.10 GALNT7 chr4 173168753 173323967 + protein_coding KNOWN OTTHUMG00000160817.3 155215 6865 42 ENSG00000221296.2 MIR548T chr4 173268160 173268233 + miRNA KNOWN NA 74 74 1 ENSG00000248774.1 RP11-798M19.3 chr4 173322206 173329694 - antisense NOVEL OTTHUMG00000160797.1 7489 521 3 ENSG00000164104.10 HMGB2 chr4 173331695 173335125 - protein_coding KNOWN OTTHUMG00000160799.1 3431 2775 21 ENSG00000272870.1 RP11-798M19.6 chr4 173363780 173370446 - antisense NOVEL OTTHUMG00000186433.1 6667 2495 8 ENSG00000164105.3 SAP30 chr4 173369969 173377532 + protein_coding KNOWN OTTHUMG00000160798.2 7564 1320 7 ENSG00000164106.6 SCRG1 chr4 173384701 173406380 - protein_coding KNOWN OTTHUMG00000161249.2 21680 5396 12 ENSG00000242882.1 RPL5P11 chr4 173419245 173420137 - processed_pseudogene KNOWN OTTHUMG00000157603.1 893 893 1 ENSG00000252898.1 RNU6-1096P chr4 173446603 173446704 - snRNA KNOWN NA 102 102 1 ENSG00000154198.13 CYP4Z2P chr1 46843095 46900437 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000008024.2 57343 1598 24 ENSG00000261646.1 RP11-489G11.3 chr4 173467833 173470041 - lincRNA NOVEL OTTHUMG00000176321.1 2209 2209 1 ENSG00000164107.8 HAND2 chr4 173524969 173530229 - protein_coding KNOWN OTTHUMG00000160775.3 5261 3601 12 ENSG00000237125.7 HAND2-AS1 chr4 173527270 173591324 + antisense NOVEL OTTHUMG00000160783.6 64055 9829 145 ENSG00000261672.1 RP11-475B2.1 chr4 173593672 173594556 + lincRNA NOVEL OTTHUMG00000176297.1 885 885 1 ENSG00000234801.3 MORF4 chr4 173615936 173616906 - processed_pseudogene KNOWN OTTHUMG00000153241.2 971 971 1 ENSG00000213370.3 RANP6 chr4 173633728 173634371 - processed_pseudogene KNOWN OTTHUMG00000153240.2 644 644 1 ENSG00000250043.1 RP11-161D15.2 chr4 173877471 173913252 - lincRNA NOVEL OTTHUMG00000160737.2 35782 1230 7 ENSG00000250708.1 RP11-161D15.1 chr4 173897252 173929525 + lincRNA NOVEL OTTHUMG00000160736.1 32274 605 7 ENSG00000251216.1 RP11-161D15.3 chr4 173924207 173990861 - lincRNA NOVEL OTTHUMG00000160738.1 66655 1993 6 ENSG00000248174.4 RP11-148L24.1 chr4 174094660 174220398 - lincRNA NOVEL OTTHUMG00000160745.2 125739 1659 9 ENSG00000169885.8 CALML6 chr1 1914827 1917296 + protein_coding KNOWN OTTHUMG00000000943.2 2470 2321 17 ENSG00000238145.2 RP11-346M5.1 chr1 46891639 46892830 + processed_pseudogene KNOWN OTTHUMG00000008021.2 1192 1192 1 ENSG00000250957.1 RP11-248N22.1 chr4 174135055 174154637 - lincRNA NOVEL OTTHUMG00000160740.1 19583 1144 2 ENSG00000251213.1 RP11-248N22.2 chr4 174164441 174168913 - lincRNA NOVEL OTTHUMG00000160741.1 4473 335 3 ENSG00000164117.11 FBXO8 chr4 174236658 174284264 - protein_coding KNOWN OTTHUMG00000160746.3 47607 2810 38 ENSG00000164118.11 CEP44 chr4 174283677 174333380 + protein_coding KNOWN OTTHUMG00000160752.2 49704 7132 81 ENSG00000249875.1 RP11-51M24.1 chr4 174354854 174376445 - lincRNA NOVEL OTTHUMG00000160754.1 21592 366 3 ENSG00000265846.1 MIR4276 chr4 174423795 174423864 + miRNA KNOWN NA 70 70 1 ENSG00000164120.12 HPGD chr4 174490177 174523154 - protein_coding KNOWN OTTHUMG00000160772.6 32978 5529 75 ENSG00000250596.1 RP11-440I14.2 chr4 174523701 174540344 - lincRNA NOVEL OTTHUMG00000160773.1 16644 2202 3 ENSG00000251584.1 RP11-440I14.3 chr4 174536640 174540784 + lincRNA NOVEL OTTHUMG00000160774.1 4145 792 3 ENSG00000250760.1 RP11-440I14.4 chr4 174539189 174540255 - transcribed_processed_pseudogene KNOWN OTTHUMG00000160800.1 1067 1067 1 ENSG00000187048.11 CYP4A11 chr1 46929177 46941484 - protein_coding KNOWN OTTHUMG00000008020.3 12308 3890 84 ENSG00000145451.11 GLRA3 chr4 174636914 174829314 - protein_coding KNOWN OTTHUMG00000149816.2 192401 9599 23 ENSG00000168594.14 ADAM29 chr4 174829668 174978180 + protein_coding KNOWN OTTHUMG00000160764.3 148513 5957 55 ENSG00000250200.1 RP13-577H12.3 chr4 174923813 174924038 - processed_pseudogene KNOWN OTTHUMG00000160758.1 226 226 1 ENSG00000265493.1 AC105914.1 chr4 174927307 174927391 - miRNA NOVEL NA 85 85 1 ENSG00000250431.1 RP13-577H12.2 chr4 174977571 174979381 - antisense NOVEL OTTHUMG00000160761.1 1811 233 3 ENSG00000249411.1 RP11-391J13.1 chr4 175017016 175019214 + processed_pseudogene KNOWN OTTHUMG00000160766.1 2199 2199 1 ENSG00000249284.1 RP11-287F9.1 chr4 175286605 175290767 + processed_pseudogene KNOWN OTTHUMG00000160765.1 4163 1458 2 ENSG00000248551.1 RP11-287F9.2 chr4 175346358 175403110 - lincRNA NOVEL OTTHUMG00000160762.2 56753 905 3 ENSG00000249945.1 RP11-598D14.1 chr4 175458289 175466697 - lincRNA NOVEL OTTHUMG00000160767.1 8409 490 3 ENSG00000251174.1 TSEN2P1 chr4 175494614 175496000 + processed_pseudogene KNOWN OTTHUMG00000160763.1 1387 1387 1 ENSG00000259832.1 CYP4A26P chr1 46967679 46967874 - unprocessed_pseudogene KNOWN OTTHUMG00000172700.1 196 196 1 ENSG00000248574.1 ADAM20P2 chr4 175574868 175576140 + processed_pseudogene KNOWN OTTHUMG00000160759.1 1273 1273 1 ENSG00000150625.15 GPM6A chr4 175632934 176002664 - protein_coding KNOWN OTTHUMG00000160760.4 369731 7040 101 ENSG00000249106.1 RP11-806K15.1 chr4 175790307 175812189 + antisense NOVEL OTTHUMG00000160795.1 21883 1213 8 ENSG00000248249.1 RP11-598O12.1 chr4 175962061 175962485 + processed_pseudogene KNOWN OTTHUMG00000160794.1 425 425 1 ENSG00000250372.1 MARK2P4 chr4 176012038 176014417 - processed_pseudogene KNOWN OTTHUMG00000160790.1 2380 2380 1 ENSG00000264130.1 AC110794.1 chr4 176038083 176038188 - miRNA NOVEL NA 106 106 1 ENSG00000150627.14 WDR17 chr4 176065834 176182818 + protein_coding KNOWN OTTHUMG00000160791.4 116985 7808 120 ENSG00000201516.1 SNORA51 chr4 176098163 176098285 + snoRNA NOVEL NA 123 123 1 ENSG00000150628.5 SPATA4 chr4 176184638 176195671 - protein_coding KNOWN OTTHUMG00000160788.2 11034 2464 14 ENSG00000164122.7 ASB5 chr4 176213673 176277571 - protein_coding KNOWN OTTHUMG00000160793.1 63899 4064 23 ENSG00000261196.1 CYP4A43P chr1 46994382 46994502 - unprocessed_pseudogene KNOWN OTTHUMG00000172701.1 121 121 1 ENSG00000248980.1 RP11-87F15.2 chr4 176308268 176320458 - antisense NOVEL OTTHUMG00000160792.1 12191 610 3 ENSG00000129128.11 SPCS3 chr4 176319964 176332245 + protein_coding KNOWN OTTHUMG00000160789.1 12282 6831 15 ENSG00000248480.1 RP11-313E19.1 chr4 176631392 176633231 - processed_pseudogene KNOWN OTTHUMG00000160732.1 1840 1050 3 ENSG00000248388.4 RP11-313E19.2 chr4 176669621 176706145 + antisense NOVEL OTTHUMG00000160733.1 36525 383 5 ENSG00000150630.3 VEGFC chr4 176683538 176792727 - protein_coding KNOWN OTTHUMG00000160734.3 109190 2420 11 ENSG00000249458.1 RP11-624A4.1 chr4 176866614 176875457 - lincRNA NOVEL OTTHUMG00000160731.1 8844 428 3 ENSG00000250263.1 RP11-765K14.1 chr4 176875702 176880605 + lincRNA NOVEL OTTHUMG00000160730.2 4904 691 2 ENSG00000222859.1 RN7SKP136 chr4 177181442 177181741 + misc_RNA KNOWN NA 300 300 1 ENSG00000249008.1 RP11-487E13.1 chr4 177242539 177248773 - lincRNA NOVEL OTTHUMG00000160721.1 6235 421 4 ENSG00000109674.3 NEIL3 chr4 177309836 177362943 + protein_coding KNOWN OTTHUMG00000160722.1 53108 2959 14 ENSG00000261593.1 CYP4A27P chr1 47000898 47001087 - unprocessed_pseudogene KNOWN OTTHUMG00000172702.1 190 190 1 ENSG00000249084.1 RP11-376O6.2 chr4 177343004 177357032 - antisense NOVEL OTTHUMG00000160720.1 14029 753 2 ENSG00000038002.7 AGA chr4 177430770 177442503 - protein_coding KNOWN OTTHUMG00000160723.1 11734 2675 31 ENSG00000250131.1 RP11-130F10.1 chr4 177444979 177677126 + antisense NOVEL OTTHUMG00000160727.1 232148 2161 6 ENSG00000201931.1 RNA5SP172 chr4 177457111 177457228 - rRNA KNOWN NA 118 118 1 ENSG00000221499.1 AC078881.1 chr4 177544477 177544564 - miRNA NOVEL NA 88 88 1 ENSG00000251416.1 RP11-140M13.1 chr4 177686673 177691068 - lincRNA NOVEL OTTHUMG00000160728.1 4396 255 2 ENSG00000231171.3 LINC01098 chr4 177728757 177990750 + lincRNA NOVEL OTTHUMG00000160724.1 261994 1034 6 ENSG00000251504.1 LINC01099 chr4 177729638 177907936 - lincRNA NOVEL OTTHUMG00000160725.1 178299 1594 9 ENSG00000253000.1 RNU1-45P chr4 178116721 178116861 - snRNA KNOWN NA 141 141 1 ENSG00000241877.1 RP11-84H6.1 chr4 178286695 178287285 + processed_pseudogene KNOWN OTTHUMG00000157604.1 591 591 1 ENSG00000261290.1 CYP4A44P chr1 47002995 47003148 - unprocessed_pseudogene KNOWN OTTHUMG00000172696.1 154 154 1 ENSG00000280918.1 AC108205.1 chr4 178401455 178401600 + miRNA NOVEL NA 146 146 1 ENSG00000201727.1 RNA5SP173 chr4 178406695 178406830 + rRNA KNOWN NA 136 136 1 ENSG00000212191.1 SNORD65 chr4 178685886 178685956 - snoRNA NOVEL NA 71 71 1 ENSG00000250839.1 RP11-296L20.1 chr4 179069437 179069594 + unprocessed_pseudogene KNOWN OTTHUMG00000160717.1 158 158 1 ENSG00000250993.1 RP11-404J23.1 chr4 179389134 179465305 - lincRNA NOVEL OTTHUMG00000160713.2 76172 539 3 ENSG00000248921.1 RP11-774G5.1 chr4 179856853 179857581 + processed_pseudogene KNOWN OTTHUMG00000160712.1 729 420 2 ENSG00000251025.1 RP11-751A18.1 chr4 180573464 180574027 - processed_pseudogene KNOWN OTTHUMG00000160962.1 564 564 1 ENSG00000249883.1 RP11-460H9.1 chr4 180731164 180759038 - lincRNA NOVEL OTTHUMG00000160705.1 27875 529 4 ENSG00000248197.1 LINC00290 chr4 181064089 181159149 - lincRNA NOVEL OTTHUMG00000160706.1 95061 593 3 ENSG00000248770.1 RP11-665C14.1 chr4 181237358 181237564 - unprocessed_pseudogene KNOWN OTTHUMG00000160699.1 207 207 1 ENSG00000186377.7 CYP4X1 chr1 47023568 47050751 + protein_coding KNOWN OTTHUMG00000008017.1 27184 2548 15 ENSG00000249460.1 RP11-665C14.2 chr4 181261161 181265029 - lincRNA NOVEL OTTHUMG00000160700.1 3869 493 2 ENSG00000225356.3 RP11-433O3.1 chr4 181522666 181523001 + processed_pseudogene KNOWN OTTHUMG00000160698.1 336 336 1 ENSG00000251336.1 RP11-540E16.2 chr4 181820019 181829973 - lincRNA NOVEL OTTHUMG00000160718.1 9955 401 3 ENSG00000251742.1 RN7SKP13 chr4 181834865 181835108 - misc_RNA KNOWN NA 244 244 1 ENSG00000177822.6 AC108142.1 chr4 181874438 182145249 - antisense NOVEL OTTHUMG00000133641.2 270812 5551 31 ENSG00000251433.1 CCNHP1 chr4 181905790 181906467 - processed_pseudogene KNOWN OTTHUMG00000160684.1 678 678 1 ENSG00000218336.6 TENM3 chr4 182143987 182803024 + protein_coding KNOWN OTTHUMG00000160682.4 659038 11984 80 ENSG00000248266.1 RP11-402C9.1 chr4 182144852 182190382 + sense_intronic NOVEL OTTHUMG00000160686.1 45531 286 2 ENSG00000221227.1 MIR1305 chr4 182169293 182169378 + miRNA KNOWN NA 86 86 1 ENSG00000252343.1 RNU2-34P chr4 182548659 182548779 + snRNA KNOWN NA 121 121 1 ENSG00000186160.4 CYP4Z1 chr1 47067488 47118319 + protein_coding KNOWN OTTHUMG00000008019.1 50832 1996 15 ENSG00000251714.1 RN7SKP67 chr4 182631454 182631688 - misc_RNA KNOWN NA 235 235 1 ENSG00000248816.1 RP11-18D7.3 chr4 182697902 182708042 - antisense NOVEL OTTHUMG00000160683.2 10141 518 2 ENSG00000248694.1 RP11-18D7.2 chr4 182772565 182773931 - antisense NOVEL OTTHUMG00000160687.2 1367 444 2 ENSG00000221186.1 AC114798.1 chr4 182826228 182826365 + miRNA NOVEL NA 138 138 1 ENSG00000272646.1 RP11-188P17.2 chr4 182881777 182882203 - lincRNA NOVEL OTTHUMG00000186436.1 427 427 1 ENSG00000129187.13 DCTD chr4 182890060 182917936 - protein_coding KNOWN OTTHUMG00000160685.3 27877 3466 87 ENSG00000250636.1 RP11-335L23.2 chr4 183028601 183029720 - processed_pseudogene KNOWN OTTHUMG00000160676.1 1120 823 2 ENSG00000230219.3 FAM92A1P2 chr4 183037665 183040119 + transcribed_processed_pseudogene KNOWN OTTHUMG00000160675.4 2455 2455 3 ENSG00000273180.1 RP11-335L23.4 chr4 183075480 183076033 - lincRNA NOVEL OTTHUMG00000186437.1 554 554 1 ENSG00000272784.1 RP11-335L23.5 chr4 183094423 183095056 - lincRNA NOVEL OTTHUMG00000186440.1 634 634 1 ENSG00000225154.2 RP11-184J23.2 chr1 47074778 47075979 - processed_pseudogene KNOWN OTTHUMG00000008018.2 1202 1202 1 ENSG00000251359.4 WWC2-AS2 chr4 183097017 183099199 - lincRNA NOVEL OTTHUMG00000160677.1 2183 2183 1 ENSG00000151718.14 WWC2 chr4 183099293 183320777 + protein_coding KNOWN OTTHUMG00000150685.3 221485 9966 145 ENSG00000252702.1 RNU7-158P chr4 183169348 183169417 - snRNA KNOWN NA 70 70 1 ENSG00000251128.1 WWC2-AS1 chr4 183233628 183240634 - antisense NOVEL OTTHUMG00000160679.1 7007 404 2 ENSG00000177300.6 CLDN22 chr4 183318194 183320774 - protein_coding KNOWN OTTHUMG00000160627.1 2581 2581 1 ENSG00000185758.7 CLDN24 chr4 183321764 183322426 - protein_coding KNOWN OTTHUMG00000160628.1 663 663 2 ENSG00000250292.1 RP11-451F20.1 chr4 183380345 183381705 + processed_pseudogene KNOWN OTTHUMG00000160624.1 1361 1361 1 ENSG00000263395.1 AC093844.1 chr4 183384553 183384620 + miRNA NOVEL NA 68 68 1 ENSG00000248376.2 RP11-692E14.1 chr4 183418890 183419805 - processed_pseudogene KNOWN OTTHUMG00000160620.4 916 916 1 ENSG00000168564.5 CDKN2AIP chr4 183444591 183448198 + protein_coding KNOWN OTTHUMG00000160626.2 3608 3193 13 ENSG00000225506.2 CYP4A22-AS1 chr1 47096653 47179271 - lincRNA NOVEL OTTHUMG00000007848.2 82619 921 4 ENSG00000213434.2 VTI1BP2 chr4 183483490 183484185 + processed_pseudogene KNOWN OTTHUMG00000160629.1 696 696 1 ENSG00000232648.3 RP11-367N14.2 chr4 183494938 183504494 - antisense NOVEL OTTHUMG00000160630.1 9557 559 3 ENSG00000168556.6 ING2 chr4 183504994 183511096 + protein_coding KNOWN OTTHUMG00000150502.1 6103 1426 4 ENSG00000272744.1 RP11-367N14.3 chr4 183516894 183517527 + lincRNA NOVEL OTTHUMG00000186441.1 634 634 1 ENSG00000182552.13 RWDD4 chr4 183639635 183659225 - protein_coding KNOWN OTTHUMG00000160632.2 19591 2776 45 ENSG00000252157.1 RNU6-479P chr4 183653572 183653676 - snRNA KNOWN NA 105 105 1 ENSG00000168538.14 TRAPPC11 chr4 183659267 183713594 + protein_coding KNOWN OTTHUMG00000160673.2 54328 5841 126 ENSG00000201433.1 RNU6-335P chr4 183675603 183675715 - snRNA KNOWN NA 113 113 1 ENSG00000251739.1 RNU6-1053P chr4 183705931 183706031 + snRNA KNOWN NA 101 101 1 ENSG00000173320.8 STOX2 chr4 183853431 184023526 + protein_coding KNOWN OTTHUMG00000160618.4 170096 10952 14 ENSG00000178821.11 TMEM52 chr1 1917590 1919273 - protein_coding KNOWN OTTHUMG00000000944.6 1684 1594 21 ENSG00000162365.10 CYP4A22 chr1 47137435 47149741 + protein_coding KNOWN OTTHUMG00000007845.2 12307 3859 77 ENSG00000248206.1 RP11-739P1.2 chr4 183987678 183988750 + sense_intronic NOVEL OTTHUMG00000160619.1 1073 622 3 ENSG00000250726.1 RP11-616K6.1 chr4 184072403 184073039 + processed_pseudogene KNOWN OTTHUMG00000160612.1 637 637 1 ENSG00000164303.9 ENPP6 chr4 184088706 184221230 - protein_coding KNOWN OTTHUMG00000160617.1 132525 4703 19 ENSG00000240159.1 RP11-162O12.1 chr4 184254509 184255330 + processed_pseudogene KNOWN OTTHUMG00000157606.1 822 822 1 ENSG00000221523.1 AC079080.1 chr4 184267357 184267431 - miRNA NOVEL NA 75 75 1 ENSG00000244512.3 RN7SL28P chr4 184278936 184279233 + misc_RNA KNOWN NA 298 298 1 ENSG00000227765.4 RP11-162O12.2 chr4 184299129 184299640 - processed_pseudogene KNOWN OTTHUMG00000160610.1 512 512 1 ENSG00000180712.3 RP11-290F5.2 chr4 184340756 184353977 - lincRNA NOVEL OTTHUMG00000160616.1 13222 2353 5 ENSG00000249096.5 RP11-290F5.1 chr4 184365183 184382306 - lincRNA NOVEL OTTHUMG00000160613.3 17124 2767 13 ENSG00000168310.9 IRF2 chr4 184387713 184474580 - protein_coding KNOWN OTTHUMG00000160606.7 86868 3116 51 ENSG00000225514.1 MTND1P34 chr1 47164510 47165920 - transcribed_processed_pseudogene KNOWN OTTHUMG00000007846.1 1411 671 2 ENSG00000251878.1 SNORD79 chr4 184431966 184432049 + snoRNA NOVEL NA 84 84 1 ENSG00000270426.1 RP11-326I11.5 chr4 184471924 184472609 - sense_intronic NOVEL OTTHUMG00000185263.1 686 686 1 ENSG00000271646.1 RP11-326I11.3 chr4 184474802 184477304 + lincRNA NOVEL OTTHUMG00000185264.1 2503 2503 1 ENSG00000271538.4 RP11-326I11.4 chr4 184506460 184537554 - lincRNA NOVEL OTTHUMG00000185265.2 31095 1252 6 ENSG00000249056.1 RP11-326I11.1 chr4 184559175 184559783 - processed_pseudogene KNOWN OTTHUMG00000160607.1 609 609 1 ENSG00000254233.1 RP11-242J7.1 chr4 184584093 184625030 - lincRNA NOVEL OTTHUMG00000163540.1 40938 1268 7 ENSG00000164305.16 CASP3 chr4 184627696 184649509 - protein_coding KNOWN OTTHUMG00000133681.3 21814 2899 49 ENSG00000164306.9 PRIMPOL chr4 184649613 184694963 + protein_coding KNOWN OTTHUMG00000160495.2 45351 2843 92 ENSG00000151725.10 CENPU chr4 184694618 184734133 - protein_coding KNOWN OTTHUMG00000160499.19 39516 2953 44 ENSG00000151726.12 ACSL1 chr4 184755595 184826818 - protein_coding KNOWN OTTHUMG00000160547.3 71224 6284 196 ENSG00000224805.2 LINC00853 chr1 47179250 47180339 + antisense NOVEL OTTHUMG00000007850.2 1090 661 2 ENSG00000249138.1 SLED1 chr4 184798296 184799046 - transcribed_processed_pseudogene KNOWN OTTHUMG00000160490.1 751 751 2 ENSG00000251139.2 RP11-701P16.2 chr4 184813619 184821300 + antisense NOVEL OTTHUMG00000160549.3 7682 628 3 ENSG00000251230.4 RP11-701P16.5 chr4 184844585 184855751 - lincRNA NOVEL OTTHUMG00000160604.1 11167 986 6 ENSG00000266698.1 MIR3945 chr4 184851013 184851110 - miRNA KNOWN NA 98 98 1 ENSG00000249173.4 LINC01093 chr4 184893871 184899454 - lincRNA NOVEL OTTHUMG00000160603.1 5584 795 9 ENSG00000251147.1 RP11-701P16.3 chr4 184910889 184911352 - processed_pseudogene KNOWN OTTHUMG00000160601.1 464 464 1 ENSG00000263458.1 MIR4455 chr4 184938383 184938440 - miRNA KNOWN NA 58 58 1 ENSG00000279460.1 RP11-517M22.1 chr4 184984277 184988127 - TEC KNOWN OTTHUMG00000160553.2 3851 3851 1 ENSG00000248517.1 RP11-386B13.4 chr4 184988997 185005186 + lincRNA NOVEL OTTHUMG00000160551.1 16190 911 2 ENSG00000187821.7 HELT chr4 185018841 185020804 + protein_coding KNOWN OTTHUMG00000160484.1 1964 1236 15 ENSG00000162366.6 PDZK1IP1 chr1 47183593 47191044 - protein_coding KNOWN OTTHUMG00000007852.2 7452 1438 14 ENSG00000250754.4 RP11-386B13.3 chr4 185051896 185107248 + lincRNA NOVEL OTTHUMG00000160487.2 55353 2526 18 ENSG00000249520.1 RP11-386B13.1 chr4 185064981 185065323 + processed_pseudogene KNOWN OTTHUMG00000160483.1 343 343 1 ENSG00000265619.1 AC093824.1 chr4 185122322 185122422 + miRNA NOVEL NA 101 101 1 ENSG00000151729.9 SLC25A4 chr4 185143241 185150382 + protein_coding KNOWN OTTHUMG00000134299.4 7142 4844 8 ENSG00000164323.11 CFAP97 chr4 185159665 185209504 - protein_coding KNOWN OTTHUMG00000160468.2 49840 6886 17 ENSG00000109762.14 SNX25 chr4 185204237 185370185 + protein_coding KNOWN OTTHUMG00000160475.1 165949 4567 89 ENSG00000109771.14 LRP2BP chr4 185363879 185395899 - protein_coding KNOWN OTTHUMG00000160460.3 32021 7360 29 ENSG00000250410.1 RP11-714G18.1 chr4 185370725 185390928 + antisense NOVEL OTTHUMG00000160464.1 20204 587 3 ENSG00000186352.7 ANKRD37 chr4 185396021 185400628 + protein_coding KNOWN OTTHUMG00000160459.1 4608 2580 21 ENSG00000109775.9 UFSP2 chr4 185399540 185425985 - protein_coding KNOWN OTTHUMG00000160441.3 26446 2781 69 ENSG00000162367.10 TAL1 chr1 47216290 47232220 - protein_coding KNOWN OTTHUMG00000007847.3 15931 5700 20 ENSG00000207231.1 Y_RNA chr4 185415973 185416086 - misc_RNA NOVEL NA 114 114 1 ENSG00000205129.7 C4orf47 chr4 185426249 185449826 + protein_coding KNOWN OTTHUMG00000160458.14 23578 1366 23 ENSG00000168491.8 CCDC110 chr4 185445182 185471759 - protein_coding KNOWN OTTHUMG00000160415.3 26578 3388 50 ENSG00000249679.1 RP11-279O9.4 chr4 185471516 185472263 + antisense NOVEL OTTHUMG00000160454.1 748 394 2 ENSG00000154553.12 PDLIM3 chr4 185500660 185535612 - protein_coding KNOWN OTTHUMG00000160412.3 34953 9117 64 ENSG00000154556.16 SORBS2 chr4 185585444 185956652 - protein_coding KNOWN OTTHUMG00000157215.7 371209 16730 507 ENSG00000233110.1 RP11-301L8.2 chr4 185587909 185594003 + antisense NOVEL OTTHUMG00000157217.2 6095 1789 4 ENSG00000235902.1 RP11-626E13.1 chr4 185665885 185675417 + antisense NOVEL OTTHUMG00000157228.1 9533 618 2 ENSG00000207497.1 Y_RNA chr4 185709873 185709967 - misc_RNA NOVEL NA 95 95 1 ENSG00000235149.1 RP11-45I20.1 chr4 185918140 185919460 + lincRNA NOVEL OTTHUMG00000157216.1 1321 549 2 ENSG00000226252.1 RP1-18D14.7 chr1 47225797 47230750 + antisense NOVEL OTTHUMG00000007844.1 4954 4036 2 ENSG00000222727.1 RNU4-64P chr4 186026456 186026586 - snRNA KNOWN NA 131 131 1 ENSG00000164342.11 TLR3 chr4 186069152 186088069 + protein_coding KNOWN OTTHUMG00000160345.5 18918 6724 17 ENSG00000109794.12 FAM149A chr4 186104419 186172667 + protein_coding KNOWN OTTHUMG00000160565.10 68249 5218 150 ENSG00000253013.1 SNORA31 chr4 186130021 186130155 + snoRNA NOVEL NA 135 135 1 ENSG00000250327.1 RP11-173M11.2 chr4 186157896 186158843 + processed_pseudogene KNOWN OTTHUMG00000160361.1 948 864 2 ENSG00000251008.1 ORAOV1P1 chr4 186170863 186171257 - processed_pseudogene KNOWN OTTHUMG00000160357.1 395 395 1 ENSG00000279943.1 FLJ38576 chr4 186189032 186191490 - TEC KNOWN OTTHUMG00000187206.2 2459 2459 1 ENSG00000145476.14 CYP4V2 chr4 186191520 186213456 + protein_coding KNOWN OTTHUMG00000160379.2 21937 9807 27 ENSG00000164344.14 KLKB1 chr4 186208979 186258471 + protein_coding KNOWN OTTHUMG00000150347.4 49493 2953 76 ENSG00000088926.12 F11 chr4 186265945 186288806 + protein_coding KNOWN OTTHUMG00000150311.7 22862 3364 47 ENSG00000123473.14 STIL chr1 47250139 47314147 - protein_coding KNOWN OTTHUMG00000007851.3 64009 7291 103 ENSG00000251165.4 F11-AS1 chr4 186286094 186500997 - antisense NOVEL OTTHUMG00000160319.4 214904 2683 17 ENSG00000213332.4 SLC25A5P6 chr4 186328716 186329601 - processed_pseudogene KNOWN OTTHUMG00000160314.1 886 886 1 ENSG00000272297.2 RP11-215A19.2 chr4 186426546 186555328 - protein_coding PUTATIVE OTTHUMG00000160316.3 128783 700 2 ENSG00000212387.1 RNU6-1055P chr4 186501109 186501215 + snRNA KNOWN NA 107 107 1 ENSG00000168412.6 MTNR1A chr4 186533655 186555567 - protein_coding KNOWN OTTHUMG00000185575.1 21913 1289 2 ENSG00000083857.12 FAT1 chr4 186587783 186726722 - protein_coding KNOWN OTTHUMG00000160320.7 138940 16177 87 ENSG00000250829.2 RP11-11N5.1 chr4 186890969 186892366 + lincRNA NOVEL OTTHUMG00000160310.2 1398 496 2 ENSG00000272218.1 RP11-11N5.3 chr4 186892552 186892983 + lincRNA NOVEL OTTHUMG00000185360.1 432 432 1 ENSG00000249539.1 MRPS36P2 chr4 186900540 186900838 + processed_pseudogene KNOWN OTTHUMG00000160311.1 299 299 1 ENSG00000249742.1 RP11-217E13.1 chr4 186979490 187021973 - lincRNA NOVEL OTTHUMG00000160309.1 42484 474 3 ENSG00000162368.12 CMPK1 chr1 47333797 47378839 + protein_coding KNOWN OTTHUMG00000007849.4 45043 3844 21 ENSG00000250971.1 RP11-696F12.1 chr4 187060099 187060930 + lincRNA NOVEL OTTHUMG00000160313.1 832 421 2 ENSG00000249747.1 RP11-308K2.1 chr4 187201986 187209346 + lincRNA NOVEL OTTHUMG00000160312.3 7361 1211 5 ENSG00000250658.1 RP11-138B4.1 chr4 187304083 187309682 - lincRNA NOVEL OTTHUMG00000160295.1 5600 2114 4 ENSG00000250042.1 RP11-91J3.2 chr4 187370648 187371921 + lincRNA NOVEL OTTHUMG00000160297.1 1274 498 3 ENSG00000250620.1 RP11-91J3.3 chr4 187413564 187415697 + lincRNA NOVEL OTTHUMG00000160298.1 2134 536 2 ENSG00000277323.1 AC093763.1 chr4 187423800 187423898 - miRNA NOVEL NA 99 99 1 ENSG00000251643.1 RP11-91J3.1 chr4 187441677 187444298 - processed_pseudogene KNOWN OTTHUMG00000160296.2 2622 1223 3 ENSG00000251490.1 RP11-237D3.1 chr4 187516153 187517208 - lincRNA NOVEL OTTHUMG00000160299.1 1056 699 2 ENSG00000250590.4 RP11-565A3.2 chr4 187532878 187672641 - lincRNA NOVEL OTTHUMG00000160302.5 139764 1266 13 ENSG00000249642.1 RP11-565A3.1 chr4 187613765 187660369 + lincRNA NOVEL OTTHUMG00000160300.2 46605 762 5 ENSG00000225762.1 LINC01389 chr1 47380928 47408477 - antisense NOVEL OTTHUMG00000007965.2 27550 483 3 ENSG00000249162.1 ADAM20P3 chr4 187746094 187748199 - processed_pseudogene KNOWN OTTHUMG00000160214.1 2106 2106 1 ENSG00000213331.4 RP11-713C19.2 chr4 187970273 187971284 + processed_pseudogene KNOWN OTTHUMG00000160218.1 1012 674 2 ENSG00000179059.8 ZFP42 chr4 187995771 188005050 + protein_coding KNOWN OTTHUMG00000160235.1 9280 2656 8 ENSG00000179046.7 TRIML2 chr4 188091273 188109603 - protein_coding KNOWN OTTHUMG00000160225.1 18331 3050 32 ENSG00000241011.1 RP11-713C19.1 chr4 188106558 188106914 + processed_pseudogene KNOWN OTTHUMG00000158781.1 357 357 1 ENSG00000201085.1 RNU6-173P chr4 188121531 188121634 - snRNA KNOWN NA 104 104 1 ENSG00000184108.6 TRIML1 chr4 188139419 188147743 + protein_coding KNOWN OTTHUMG00000160237.1 8325 2113 13 ENSG00000247130.2 RP11-366H4.3 chr4 188140822 188143379 - antisense NOVEL OTTHUMG00000160238.1 2558 505 2 ENSG00000248370.1 RP11-366H4.1 chr4 188160065 188161139 + lincRNA NOVEL OTTHUMG00000160236.1 1075 677 2 ENSG00000281034.1 AC138781.1 chr4 188207839 188207890 + miRNA NOVEL NA 52 52 1 ENSG00000186790.5 FOXE3 chr1 47416072 47418052 + protein_coding KNOWN OTTHUMG00000007954.1 1981 1981 1 ENSG00000242169.2 RP11-219G10.1 chr4 188349376 188350024 - processed_pseudogene KNOWN OTTHUMG00000157611.2 649 649 1 ENSG00000248880.1 ICE2P1 chr4 188387471 188389666 - processed_pseudogene KNOWN OTTHUMG00000160211.1 2196 1849 2 ENSG00000249378.4 LINC01060 chr4 188400736 188681051 + lincRNA NOVEL OTTHUMG00000160242.4 280316 3202 25 ENSG00000250523.1 RP11-756P10.1 chr4 188630924 188631747 + processed_pseudogene KNOWN OTTHUMG00000160212.1 824 336 2 ENSG00000275826.1 RP11-756P10.7 chr4 188713644 188715442 + processed_pseudogene KNOWN OTTHUMG00000187586.1 1799 1799 1 ENSG00000252275.1 RNU7-192P chr4 188716665 188716725 - snRNA KNOWN NA 61 61 1 ENSG00000180015.12 RP11-756P10.3 chr4 188738373 188739494 + processed_pseudogene KNOWN OTTHUMG00000160289.1 1122 1122 1 ENSG00000278974.1 RP11-756P10.6 chr4 188740507 188741281 - TEC KNOWN OTTHUMG00000176269.1 775 775 1 ENSG00000249269.1 RP11-756P10.4 chr4 188757679 188778979 + lincRNA NOVEL OTTHUMG00000160325.1 21301 437 3 ENSG00000251619.1 RP11-756P10.5 chr4 188776657 188785511 + lincRNA NOVEL OTTHUMG00000160328.1 8855 426 3 ENSG00000142609.16 CFAP74 chr1 1921951 2003837 - protein_coding KNOWN OTTHUMG00000000945.16 81887 10422 116 ENSG00000237424.1 FOXD2-AS1 chr1 47432133 47434641 - antisense NOVEL OTTHUMG00000007949.2 2509 2509 1 ENSG00000250626.2 RP11-756P10.2 chr4 188777679 188796633 - lincRNA NOVEL OTTHUMG00000160282.3 18955 1991 3 ENSG00000250024.1 RP11-818C3.1 chr4 188990715 189002075 - lincRNA NOVEL OTTHUMG00000161907.1 11361 646 2 ENSG00000251310.1 RP11-706F1.1 chr4 189193100 189204877 + lincRNA NOVEL OTTHUMG00000161908.1 11778 412 2 ENSG00000249877.1 RP11-706F1.2 chr4 189288677 189291336 - lincRNA NOVEL OTTHUMG00000161909.1 2660 339 2 ENSG00000205100.2 HSP90AA4P chr4 189472965 189475192 + transcribed_processed_pseudogene KNOWN OTTHUMG00000160204.1 2228 2228 5 ENSG00000250739.1 LINC01262 chr4 189659605 189661486 + lincRNA NOVEL OTTHUMG00000160329.1 1882 879 3 ENSG00000272566.1 RP11-462G22.2 chr4 189703881 189704490 - lincRNA NOVEL OTTHUMG00000186463.1 610 610 1 ENSG00000202215.1 RNU1-51P chr4 189709539 189709714 - snRNA KNOWN NA 176 176 1 ENSG00000245685.5 AF146191.4 chr4 189780336 189940271 - lincRNA NOVEL OTTHUMG00000160585.3 159936 2304 13 ENSG00000274358.1 RP11-463J17.2 chr4 189809120 189810758 + lincRNA NOVEL OTTHUMG00000187069.1 1639 1496 2 ENSG00000186564.5 FOXD2 chr1 47436017 47440691 + protein_coding KNOWN OTTHUMG00000007950.1 4675 4675 1 ENSG00000250666.1 RP11-463J17.1 chr4 189881515 189884868 + lincRNA NOVEL OTTHUMG00000160584.1 3354 592 2 ENSG00000109536.10 FRG1 chr4 189940788 189963204 + protein_coding KNOWN OTTHUMG00000160202.23 22417 1707 43 ENSG00000249462.1 MLLT10P2 chr4 189973599 189973847 - processed_pseudogene KNOWN OTTHUMG00000161001.1 249 249 1 ENSG00000271307.1 AF146191.8 chr4 189979902 189980607 + processed_pseudogene KNOWN OTTHUMG00000185262.1 706 706 1 ENSG00000251297.1 TUBB7P chr4 189982523 189984871 - unprocessed_pseudogene KNOWN OTTHUMG00000161002.1 2349 1305 4 ENSG00000199572.1 RNA5SP174 chr4 190015138 190015255 + rRNA KNOWN NA 118 118 1 ENSG00000201145.1 RNA5SP175 chr4 190017696 190017814 + rRNA KNOWN NA 119 119 1 ENSG00000224807.5 DUX4L9 chr4 190021407 190022665 - unprocessed_pseudogene KNOWN OTTHUMG00000161003.2 1259 1259 1 ENSG00000205097.5 FRG2 chr4 190024351 190027257 - protein_coding KNOWN OTTHUMG00000160339.2 2907 2103 8 ENSG00000250053.1 RARRES2P4 chr4 190037916 190038399 - processed_pseudogene KNOWN OTTHUMG00000160173.1 484 484 1 ENSG00000271355.1 RP4-666O22.3 chr1 47483698 47484162 - processed_pseudogene KNOWN OTTHUMG00000184287.1 465 465 1 ENSG00000214273.4 AGGF1P1 chr4 190041342 190043414 + processed_pseudogene KNOWN OTTHUMG00000160174.1 2073 2073 1 ENSG00000249003.1 CLUHP4 chr4 190057902 190063005 - unprocessed_pseudogene KNOWN OTTHUMG00000161343.1 5104 1343 12 ENSG00000221407.1 U85056.1 chr4 190060380 190060475 - miRNA NOVEL NA 96 96 1 ENSG00000281591.1 DBET chr4 190064502 190067864 + lincRNA KNOWN OTTHUMG00000189731.1 3363 3363 1 ENSG00000277162.1 DBET chr4 190065233 190065914 + processed_pseudogene KNOWN OTTHUMG00000170694.3 682 682 1 ENSG00000281720.1 DUX4L8 chr4 190067935 190069209 + unprocessed_pseudogene KNOWN OTTHUMG00000161320.5 1275 1275 1 ENSG00000261806.2 AC126281.1 chr4 190069302 190069385 + miRNA NOVEL NA 84 84 1 ENSG00000281652.1 DUX4L7 chr4 190071232 190072506 + unprocessed_pseudogene KNOWN OTTHUMG00000161314.4 1275 1275 1 ENSG00000275378.1 AC126281.3 chr4 190072599 190072682 + miRNA NOVEL NA 84 84 1 ENSG00000281058.1 DUX4L6 chr4 190074525 190075799 + unprocessed_pseudogene KNOWN OTTHUMG00000161313.4 1275 1275 1 ENSG00000229554.2 RPL21P24 chr1 47497894 47498341 - processed_pseudogene KNOWN OTTHUMG00000007964.2 448 448 1 ENSG00000278393.1 AC126281.8 chr4 190075892 190075975 + miRNA NOVEL NA 84 84 1 ENSG00000280799.1 DUX4L5 chr4 190077818 190079092 + unprocessed_pseudogene KNOWN OTTHUMG00000161315.4 1275 1275 1 ENSG00000273545.1 AC126281.2 chr4 190079185 190079268 + miRNA NOVEL NA 84 84 1 ENSG00000258834.4 DUX4L4 chr4 190081118 190082386 + unprocessed_pseudogene KNOWN OTTHUMG00000161318.4 1269 1269 1 ENSG00000275922.1 AC126281.5 chr4 190082479 190082562 + miRNA NOVEL NA 84 84 1 ENSG00000280757.1 DUX4L1 chr4 190084412 190085686 + unprocessed_pseudogene KNOWN OTTHUMG00000161317.4 1275 1275 1 ENSG00000277528.1 AC126281.7 chr4 190085779 190085862 + miRNA NOVEL NA 84 84 1 ENSG00000281627.1 DUX4L3 chr4 190087705 190088979 + unprocessed_pseudogene KNOWN OTTHUMG00000161319.4 1275 1275 1 ENSG00000277451.1 AC126281.6 chr4 190089072 190089155 + miRNA NOVEL NA 84 84 1 ENSG00000280457.1 DUX4L2 chr4 190091005 190092279 + unprocessed_pseudogene KNOWN OTTHUMG00000161316.4 1275 1275 1 ENSG00000221346.1 AL356458.1 chr1 47502504 47502639 + miRNA NOVEL NA 136 136 1 ENSG00000275622.1 AC126281.4 chr4 190092372 190092455 + miRNA NOVEL NA 84 84 1 ENSG00000260596.4 DUX4 chr4 190173774 190185942 + protein_coding KNOWN OTTHUMG00000175568.1 12169 2036 16 ENSG00000274222.1 AC215524.1 chr4 190175141 190175224 + miRNA NOVEL NA 84 84 1 ENSG00000261914.2 ABC7-42391500H16.2 chr4 190195727 190196190 + processed_pseudogene KNOWN OTTHUMG00000179679.1 464 464 1 ENSG00000250020.1 RP11-811I15.1 chr5 58198 58915 + processed_pseudogene KNOWN OTTHUMG00000161552.1 718 718 1 ENSG00000249430.1 CTD-2231H16.1 chr5 92151 139863 + lincRNA NOVEL OTTHUMG00000161574.1 47713 705 3 ENSG00000153404.12 PLEKHG4B chr5 140258 189970 + protein_coding KNOWN OTTHUMG00000161570.1 49713 12203 35 ENSG00000199540.1 Y_RNA chr5 144087 144197 - misc_RNA NOVEL NA 111 111 1 ENSG00000185028.3 LRRC14B chr5 191511 195353 + protein_coding KNOWN OTTHUMG00000161578.2 3843 1573 2 ENSG00000261434.1 CTD-2083E4.7 chr5 195778 196341 + sense_overlapping NOVEL OTTHUMG00000175446.1 564 564 1 ENSG00000227883.1 ATP6V0E1P4 chr1 47550196 47550753 + processed_pseudogene KNOWN OTTHUMG00000007966.1 558 242 2 ENSG00000164366.3 CCDC127 chr5 196871 218215 - protein_coding KNOWN OTTHUMG00000161586.2 21345 9701 5 ENSG00000260774.1 CTD-2083E4.4 chr5 213898 217279 - processed_transcript NOVEL OTTHUMG00000161585.1 3382 2881 2 ENSG00000073578.15 SDHA chr5 218241 256700 + protein_coding KNOWN OTTHUMG00000090275.4 38460 8383 140 ENSG00000277812.1 AC021087.1 chr5 262769 262881 + miRNA NOVEL NA 113 113 1 ENSG00000248925.1 CTD-2083E4.6 chr5 269858 271516 - antisense NOVEL OTTHUMG00000161587.1 1659 522 2 ENSG00000249915.6 PDCD6 chr5 271621 353856 + protein_coding KNOWN OTTHUMG00000090283.5 82236 9493 61 ENSG00000250848.1 CTD-2083E4.5 chr5 288833 290321 - processed_pseudogene KNOWN OTTHUMG00000161584.1 1489 1203 2 ENSG00000063438.15 AHRR chr5 304176 438291 + protein_coding KNOWN OTTHUMG00000162171.5 134116 7678 64 ENSG00000214278.4 CTD-2228K2.2 chr5 403731 404546 - processed_pseudogene KNOWN OTTHUMG00000161650.1 816 816 1 ENSG00000250645.1 CTD-2228K2.1 chr5 418703 419109 + processed_pseudogene KNOWN OTTHUMG00000161640.2 407 407 1 ENSG00000221447.1 AL591415.1 chr1 47621093 47621177 - miRNA NOVEL NA 85 85 1 ENSG00000221990.4 EXOC3-AS1 chr5 441498 443160 - antisense KNOWN OTTHUMG00000162235.1 1663 1663 2 ENSG00000180104.14 EXOC3 chr5 443158 471937 + protein_coding KNOWN OTTHUMG00000162205.3 28780 8182 65 ENSG00000188242.4 PP7080 chr5 466124 473098 - antisense NOVEL OTTHUMG00000162206.2 6975 2766 8 ENSG00000225138.6 CTD-2228K2.7 chr5 473236 480884 + processed_transcript NOVEL OTTHUMG00000167373.3 7649 4302 23 ENSG00000066230.9 SLC9A3 chr5 473310 524332 - protein_coding KNOWN OTTHUMG00000090315.2 51023 2783 38 ENSG00000250385.1 RP11-310P5.2 chr5 524705 526594 + antisense NOVEL OTTHUMG00000162153.1 1890 442 2 ENSG00000264233.1 MIR4456 chr5 535840 535882 - miRNA KNOWN NA 43 43 1 ENSG00000249650.1 RP11-310P5.1 chr5 602620 612210 - antisense NOVEL OTTHUMG00000162152.1 9591 591 3 ENSG00000112877.7 CEP72 chr5 612272 667168 + protein_coding KNOWN OTTHUMG00000161745.4 54897 3658 23 ENSG00000171368.11 TPPP chr5 659862 693395 - protein_coding KNOWN OTTHUMG00000131011.4 33534 6022 4 ENSG00000227947.1 RP11-543D5.1 chr1 47688463 47703383 + lincRNA NOVEL OTTHUMG00000007956.1 14921 815 3 ENSG00000271781.1 CTD-2589H19.6 chr5 675826 676616 + antisense NOVEL OTTHUMG00000185406.1 791 791 1 ENSG00000206077.9 ZDHHC11B chr5 710360 766952 - protein_coding KNOWN OTTHUMG00000162148.3 56593 4840 28 ENSG00000249908.2 BRD9P2 chr5 767382 768930 - unprocessed_pseudogene KNOWN OTTHUMG00000162147.2 1549 239 2 ENSG00000188818.11 ZDHHC11 chr5 795606 850986 - protein_coding KNOWN OTTHUMG00000090319.4 55381 6953 69 ENSG00000247872.2 SPCS2P3 chr5 816346 817001 + processed_pseudogene KNOWN OTTHUMG00000161652.1 656 656 1 ENSG00000028310.16 BRD9 chr5 850291 892824 - protein_coding KNOWN OTTHUMG00000159258.3 42534 9572 169 ENSG00000071539.12 TRIP13 chr5 892643 919357 + protein_coding KNOWN OTTHUMG00000090349.27 26715 3560 42 ENSG00000248949.1 RP11-661C8.2 chr5 946315 956520 + lincRNA NOVEL OTTHUMG00000162130.1 10206 559 2 ENSG00000250173.1 RP11-661C8.3 chr5 979365 981300 + lincRNA NOVEL OTTHUMG00000162131.1 1936 420 2 ENSG00000215246.5 RP11-43F13.3 chr5 987180 997308 - antisense NOVEL OTTHUMG00000161930.2 10129 3482 2 ENSG00000269113.3 TRABD2B chr1 47760528 47996895 - protein_coding KNOWN OTTHUMG00000007960.3 236368 7034 11 ENSG00000272347.1 RP11-43F13.4 chr5 1005039 1006623 + lincRNA NOVEL OTTHUMG00000185407.1 1585 1585 1 ENSG00000145506.12 NKD2 chr5 1008829 1038943 + protein_coding KNOWN OTTHUMG00000090348.3 30115 2885 31 ENSG00000113504.18 SLC12A7 chr5 1050376 1112035 - protein_coding KNOWN OTTHUMG00000161931.6 61660 6009 41 ENSG00000263834.1 MIR4635 chr5 1062896 1062974 - miRNA KNOWN NA 79 79 1 ENSG00000249201.2 CTD-3080P12.3 chr5 1173141 1178605 - antisense NOVEL OTTHUMG00000161928.2 5465 1761 10 ENSG00000174358.14 SLC6A19 chr5 1201595 1225117 + protein_coding KNOWN OTTHUMG00000161636.1 23523 5276 23 ENSG00000164363.9 SLC6A18 chr5 1225355 1246189 + protein_coding KNOWN OTTHUMG00000090356.4 20835 2121 15 ENSG00000164362.17 TERT chr5 1253147 1295069 - protein_coding KNOWN OTTHUMG00000090357.5 41923 4616 67 ENSG00000263670.1 MIR4457 chr5 1309310 1309377 - miRNA KNOWN NA 68 68 1 ENSG00000049656.12 CLPTM1L chr5 1317744 1345099 - protein_coding KNOWN OTTHUMG00000131015.4 27356 6557 124 ENSG00000223814.1 RP11-543D5.2 chr1 47761132 47765547 - lincRNA NOVEL OTTHUMG00000007958.1 4416 407 2 ENSG00000250584.2 LINC01511 chr5 1363582 1380067 - lincRNA NOVEL OTTHUMG00000161736.2 16486 1692 6 ENSG00000248951.2 RP11-325I22.1 chr5 1370543 1370945 - processed_pseudogene KNOWN OTTHUMG00000161735.2 403 403 1 ENSG00000279908.1 RP11-325I22.3 chr5 1383159 1386409 - TEC KNOWN OTTHUMG00000173424.1 3251 3251 1 ENSG00000142319.17 SLC6A3 chr5 1392790 1445430 - protein_coding KNOWN OTTHUMG00000131016.6 52641 4461 20 ENSG00000153395.8 LPCAT1 chr5 1456480 1523977 - protein_coding KNOWN OTTHUMG00000131017.4 67498 6494 50 ENSG00000273742.1 MIR6075 chr5 1510762 1510856 - miRNA KNOWN NA 95 95 1 ENSG00000251532.1 CTD-2245E15.3 chr5 1544107 1551710 - lincRNA NOVEL OTTHUMG00000162543.1 7604 692 4 ENSG00000278350.1 AC091849.1 chr5 1569421 1569533 - miRNA NOVEL NA 113 113 1 ENSG00000185986.11 SDHAP3 chr5 1572222 1594620 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000161733.3 22399 1173 9 ENSG00000271119.1 CTD-2012J19.3 chr5 1594626 1611467 + lincRNA NOVEL OTTHUMG00000185137.1 16842 1661 3 ENSG00000233542.1 RP11-547D24.1 chr1 2013213 2015530 - antisense NOVEL OTTHUMG00000041065.1 2318 1954 2 ENSG00000225028.1 RP11-330M19.1 chr1 47818066 47820237 + lincRNA NOVEL OTTHUMG00000007961.1 2172 1807 2 ENSG00000248126.1 CTD-2012J19.2 chr5 1598127 1598247 + unprocessed_pseudogene KNOWN OTTHUMG00000162542.1 121 121 1 ENSG00000188002.9 RP11-43F13.1 chr5 1598920 1634005 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000161734.3 35086 3364 36 ENSG00000232615.4 CTD-2012J19.1 chr5 1614836 1616334 + processed_pseudogene KNOWN OTTHUMG00000161637.3 1499 1075 3 ENSG00000263746.1 MIR4277 chr5 1708785 1708868 - miRNA KNOWN NA 84 84 1 ENSG00000260066.1 CTD-2587M23.1 chr5 1725149 1728172 + lincRNA NOVEL OTTHUMG00000173459.1 3024 3024 1 ENSG00000171421.11 MRPL36 chr5 1798386 1801366 - protein_coding KNOWN OTTHUMG00000090373.3 2981 1394 10 ENSG00000145494.10 NDUFS6 chr5 1801400 1816605 + protein_coding KNOWN OTTHUMG00000090372.3 15206 1451 9 ENSG00000249966.1 CTD-2194D22.1 chr5 1850950 1851497 + antisense NOVEL OTTHUMG00000161599.1 548 428 2 ENSG00000250417.1 CTD-2194D22.2 chr5 1855970 1856568 - lincRNA NOVEL OTTHUMG00000161601.1 599 493 2 ENSG00000279222.1 CTD-2194D22.5 chr5 1858409 1859890 - TEC KNOWN OTTHUMG00000175438.1 1482 1482 1 ENSG00000226133.4 RP4-683M8.2 chr1 48053545 48067201 + lincRNA NOVEL OTTHUMG00000007952.1 13657 1119 7 ENSG00000113430.8 IRX4 chr5 1877413 1887236 - protein_coding KNOWN OTTHUMG00000090411.3 9824 2815 45 ENSG00000249116.1 CTD-2194D22.3 chr5 1883966 1884649 + antisense NOVEL OTTHUMG00000161602.1 684 425 2 ENSG00000249326.1 CTD-2194D22.4 chr5 1887332 1900493 + antisense NOVEL OTTHUMG00000161605.1 13162 1635 4 ENSG00000248994.1 RP11-259O2.1 chr5 1933863 1959176 + lincRNA NOVEL OTTHUMG00000161604.1 25314 888 4 ENSG00000248597.1 RP11-259O2.2 chr5 1963609 1967154 - lincRNA NOVEL OTTHUMG00000161600.1 3546 490 3 ENSG00000249731.1 RP11-259O2.3 chr5 1968094 1969013 + lincRNA NOVEL OTTHUMG00000161603.1 920 560 2 ENSG00000201026.1 Y_RNA chr5 2184710 2184820 + misc_RNA NOVEL NA 111 111 1 ENSG00000275733.1 RP11-24P24.1 chr5 2261859 2262023 + processed_pseudogene KNOWN OTTHUMG00000187564.1 165 165 1 ENSG00000281560.1 LSINCT5 chr5 2712591 2715237 + lincRNA KNOWN OTTHUMG00000189568.1 2647 2647 1 ENSG00000259757.1 RP11-129I19.2 chr5 2736662 2737759 - lincRNA NOVEL OTTHUMG00000172228.1 1098 688 2 ENSG00000231413.1 RP11-193P11.3 chr1 48078787 48082196 - lincRNA NOVEL OTTHUMG00000008050.1 3410 292 2 ENSG00000170561.11 IRX2 chr5 2745845 2751662 - protein_coding KNOWN OTTHUMG00000090377.3 5818 3384 9 ENSG00000186493.10 C5orf38 chr5 2752131 2755397 + protein_coding KNOWN OTTHUMG00000161741.11 3267 1925 24 ENSG00000249541.1 RP11-692C23.1 chr5 2787451 2788549 - processed_pseudogene KNOWN OTTHUMG00000161609.2 1099 1099 1 ENSG00000248137.1 RP11-468D11.1 chr5 2831021 2835139 - lincRNA NOVEL OTTHUMG00000161606.1 4119 560 2 ENSG00000248736.1 RP11-35O7.1 chr5 2965006 2967628 + lincRNA NOVEL OTTHUMG00000161607.1 2623 553 2 ENSG00000249808.2 LINC01377 chr5 3177835 3181232 + lincRNA KNOWN OTTHUMG00000161608.2 3398 649 2 ENSG00000248118.1 LINC01019 chr5 3417152 3536094 - lincRNA NOVEL OTTHUMG00000161629.1 118943 3199 5 ENSG00000249830.1 RP11-121L11.3 chr5 3452816 3461660 + lincRNA NOVEL OTTHUMG00000161631.1 8845 574 3 ENSG00000250716.1 LINC01017 chr5 3496229 3504004 - lincRNA NOVEL OTTHUMG00000161633.1 7776 768 3 ENSG00000170549.3 IRX1 chr5 3596054 3601403 + protein_coding KNOWN OTTHUMG00000161632.1 5350 1858 4 ENSG00000237180.1 CYP46A4P chr1 48089368 48089634 + processed_pseudogene KNOWN OTTHUMG00000007962.1 267 267 1 ENSG00000259603.1 CTD-2012M11.3 chr5 3596211 3600188 - antisense NOVEL OTTHUMG00000172226.1 3978 383 2 ENSG00000280764.1 AC091947.1 chr5 3719695 3719789 - miRNA NOVEL NA 95 95 1 ENSG00000248962.1 CTD-2287N17.1 chr5 4012708 4013649 - lincRNA NOVEL OTTHUMG00000161634.1 942 559 2 ENSG00000249994.1 CTD-2383I20.1 chr5 4033713 4041764 - lincRNA NOVEL OTTHUMG00000161630.1 8052 686 3 ENSG00000250921.1 CTD-2008N3.1 chr5 4135682 4143648 + lincRNA NOVEL OTTHUMG00000161635.1 7967 566 2 ENSG00000260763.1 RP11-445O3.3 chr5 4436850 4440259 - lincRNA NOVEL OTTHUMG00000175410.1 3410 3300 2 ENSG00000248973.1 RP11-445O3.2 chr5 4451930 4866221 - lincRNA NOVEL OTTHUMG00000161642.1 414292 721 6 ENSG00000231291.3 RP11-445O3.1 chr5 4512262 4516776 + lincRNA NOVEL OTTHUMG00000161646.1 4515 1676 2 ENSG00000251371.1 CTD-2318H23.1 chr5 4640731 4648254 + lincRNA NOVEL OTTHUMG00000161641.1 7524 540 2 ENSG00000249521.1 CTD-2161F6.3 chr5 4773481 4774865 + lincRNA NOVEL OTTHUMG00000161644.1 1385 801 2 ENSG00000242267.5 SKINTL chr1 48096092 48182428 - unitary_pseudogene KNOWN OTTHUMG00000007955.4 86337 2010 16 ENSG00000248311.1 CTD-2161F6.2 chr5 4775476 4805769 - lincRNA NOVEL OTTHUMG00000161647.1 30294 456 2 ENSG00000248467.1 CTD-2161F6.1 chr5 4831699 4849800 - lincRNA NOVEL OTTHUMG00000161649.1 18102 295 2 ENSG00000249941.1 CTD-2046I8.1 chr5 4866521 4874759 + lincRNA NOVEL OTTHUMG00000161645.2 8239 471 3 ENSG00000251506.1 CTD-2247C11.2 chr5 4967764 4970425 - lincRNA NOVEL OTTHUMG00000161648.1 2662 444 3 ENSG00000250481.1 CTD-2247C11.1 chr5 4974690 5034267 - lincRNA NOVEL OTTHUMG00000161643.2 59578 556 4 ENSG00000215231.6 LINC01020 chr5 5034359 5070004 + lincRNA NOVEL OTTHUMG00000161653.2 35646 2070 17 ENSG00000251426.1 CTD-2247C11.4 chr5 5046796 5049497 - lincRNA NOVEL OTTHUMG00000161659.2 2702 642 4 ENSG00000250529.1 CTD-2247C11.5 chr5 5069192 5078311 - lincRNA NOVEL OTTHUMG00000161660.1 9120 432 2 ENSG00000223007.1 RN7SKP73 chr5 5126046 5126337 + misc_RNA KNOWN NA 292 292 1 ENSG00000250579.1 CTD-2297D10.2 chr5 5132780 5140054 - antisense NOVEL OTTHUMG00000161668.1 7275 889 4 ENSG00000279096.1 AL356289.1 chr1 48102068 48104707 + protein_coding KNOWN NA 2640 2640 1 ENSG00000145536.14 ADAMTS16 chr5 5140330 5320304 + protein_coding KNOWN OTTHUMG00000161663.1 179975 5863 56 ENSG00000250866.1 CTD-2297D10.1 chr5 5142138 5176214 - antisense NOVEL OTTHUMG00000161665.1 34077 454 2 ENSG00000251568.1 ALG3P1 chr5 5375723 5376836 - processed_pseudogene KNOWN OTTHUMG00000161662.1 1114 1114 1 ENSG00000248729.1 RP11-531A21.3 chr5 5395378 5395957 - processed_pseudogene KNOWN OTTHUMG00000161666.1 580 580 1 ENSG00000250808.1 RP11-531A21.4 chr5 5395972 5396335 - processed_pseudogene KNOWN OTTHUMG00000161667.1 364 364 1 ENSG00000251476.2 RP11-531A21.2 chr5 5396477 5396968 - processed_pseudogene KNOWN OTTHUMG00000161664.2 492 492 1 ENSG00000164151.10 ICE1 chr5 5420664 5490234 + protein_coding NOVEL OTTHUMG00000161639.2 69571 8678 33 ENSG00000277333.1 AC026799.1 chr5 5515977 5516044 - miRNA NOVEL NA 68 68 1 ENSG00000261037.1 CTC-471C19.1 chr5 6019029 6022283 - lincRNA NOVEL OTTHUMG00000173439.1 3255 3255 1 ENSG00000259861.1 CTC-471C19.2 chr5 6030035 6030841 + lincRNA NOVEL OTTHUMG00000173440.1 807 442 2 ENSG00000223720.1 RP5-1024N4.2 chr1 48205965 48206843 + lincRNA NOVEL OTTHUMG00000007957.1 879 270 3 ENSG00000221568.1 AC026797.1 chr5 6112111 6112200 + miRNA NOVEL NA 90 90 1 ENSG00000278913.1 CTD-2299N12.1 chr5 6134303 6137171 + TEC KNOWN OTTHUMG00000175444.1 2869 2869 1 ENSG00000250730.2 HMGB3P3 chr5 6289857 6290624 + processed_pseudogene KNOWN OTTHUMG00000161681.2 768 400 2 ENSG00000250490.1 FLJ33360 chr5 6310441 6339884 - lincRNA NOVEL OTTHUMG00000161679.1 29444 2923 4 ENSG00000133398.3 MED10 chr5 6371881 6378594 - protein_coding KNOWN OTTHUMG00000161682.1 6714 1880 8 ENSG00000215218.3 UBE2QL1 chr5 6448623 6494909 + protein_coding KNOWN OTTHUMG00000161683.1 46287 4317 2 ENSG00000271230.1 CTD-2195M18.2 chr5 6532891 6533200 - processed_pseudogene KNOWN OTTHUMG00000184317.1 310 310 1 ENSG00000250056.4 LINC01018 chr5 6582136 6588499 + lincRNA NOVEL OTTHUMG00000161680.1 6364 3518 12 ENSG00000037474.13 NSUN2 chr5 6599239 6633291 - protein_coding KNOWN OTTHUMG00000090455.2 34053 5506 86 ENSG00000145545.10 SRD5A1 chr5 6633343 6674386 + protein_coding KNOWN OTTHUMG00000090456.3 41044 7715 18 ENSG00000117834.11 SLC5A9 chr1 48222685 48248644 + protein_coding KNOWN OTTHUMG00000007959.6 25960 4535 94 ENSG00000248677.1 CTD-2044J15.1 chr5 6686325 6707711 - lincRNA NOVEL OTTHUMG00000161705.1 21387 3364 5 ENSG00000112941.11 PAPD7 chr5 6714605 6757048 + protein_coding KNOWN OTTHUMG00000090457.2 42444 5187 29 ENSG00000251365.1 RP11-332J15.3 chr5 6765891 6771953 + lincRNA NOVEL OTTHUMG00000161703.1 6063 596 3 ENSG00000272071.1 RP11-332J15.4 chr5 6779458 6779998 + lincRNA NOVEL OTTHUMG00000185412.1 541 541 1 ENSG00000249734.1 RP11-332J15.1 chr5 6795880 6826728 + lincRNA NOVEL OTTHUMG00000161704.1 30849 552 2 ENSG00000200243.1 RN7SKP79 chr5 6848127 6848462 - misc_RNA KNOWN NA 336 336 1 ENSG00000250060.1 RP11-332J15.2 chr5 6868559 6886787 + lincRNA NOVEL OTTHUMG00000161706.1 18229 553 3 ENSG00000250974.1 RP11-122F24.1 chr5 6933670 7190812 + lincRNA NOVEL OTTHUMG00000161651.1 257143 568 6 ENSG00000212258.1 RNA5SP176 chr5 7047227 7047336 + rRNA KNOWN NA 110 110 1 ENSG00000237611.2 Metazoa_SRP chr5 7239781 7240018 + misc_RNA NOVEL NA 238 238 1 ENSG00000272491.1 RP5-1024N4.4 chr1 48227888 48229561 - antisense NOVEL OTTHUMG00000185781.1 1674 1674 1 ENSG00000248775.1 RP11-404K5.3 chr5 7287924 7288477 - processed_pseudogene KNOWN OTTHUMG00000161898.2 554 246 2 ENSG00000247732.2 RP11-404K5.1 chr5 7290823 7296345 + unprocessed_pseudogene KNOWN OTTHUMG00000161904.1 5523 203 2 ENSG00000205976.4 RP11-404K5.2 chr5 7299774 7306592 - unprocessed_pseudogene KNOWN OTTHUMG00000161905.1 6819 2465 8 ENSG00000251250.1 RP11-404K5.4 chr5 7326064 7326609 + lincRNA NOVEL OTTHUMG00000161896.1 546 332 2 ENSG00000251678.1 CTD-2296D1.1 chr5 7344579 7345921 + lincRNA NOVEL OTTHUMG00000161903.1 1343 564 2 ENSG00000250668.1 CTD-2296D1.2 chr5 7346986 7347977 - lincRNA NOVEL OTTHUMG00000161901.1 992 885 2 ENSG00000249638.1 CTD-2296D1.3 chr5 7362979 7364531 - lincRNA NOVEL OTTHUMG00000161899.1 1553 407 3 ENSG00000249865.1 CTD-2296D1.4 chr5 7367929 7373074 - antisense NOVEL OTTHUMG00000161902.1 5146 343 3 ENSG00000223597.2 CTD-2296D1.5 chr5 7373117 7379790 + lincRNA NOVEL OTTHUMG00000161895.1 6674 577 2 ENSG00000078295.14 ADCY2 chr5 7396208 7830081 + protein_coding KNOWN OTTHUMG00000090476.4 433874 17538 83 ENSG00000279214.1 AL109659.1 chr1 48262230 48263179 - protein_coding KNOWN NA 950 950 1 ENSG00000250761.2 RP11-711G10.1 chr5 7707802 7749766 - antisense NOVEL OTTHUMG00000161894.2 41965 522 3 ENSG00000215217.5 C5orf49 chr5 7830378 7851490 - protein_coding KNOWN OTTHUMG00000161897.1 21113 2385 6 ENSG00000124275.13 MTRR chr5 7851186 7906025 + protein_coding KNOWN OTTHUMG00000090477.2 54840 6498 144 ENSG00000124279.10 FASTKD3 chr5 7859159 7869037 - protein_coding KNOWN OTTHUMG00000131029.2 9879 2857 38 ENSG00000251168.1 CTD-2072I24.1 chr5 7924292 7925398 + lincRNA NOVEL OTTHUMG00000161900.1 1107 295 3 ENSG00000199773.1 RNU1-76P chr5 7980146 7980304 + snRNA KNOWN NA 159 159 1 ENSG00000280338.1 RP11-334G8.1 chr5 8080186 8080761 - TEC KNOWN OTTHUMG00000175428.1 576 576 1 ENSG00000280251.1 RP11-215I16.2 chr5 8143618 8143784 + TEC KNOWN OTTHUMG00000175430.1 167 167 1 ENSG00000249486.1 RP11-215I16.1 chr5 8157541 8157788 - unprocessed_pseudogene KNOWN OTTHUMG00000161711.1 248 248 1 ENSG00000245729.2 RP11-480D4.1 chr5 8333481 8457558 - lincRNA NOVEL OTTHUMG00000161709.2 124078 1587 6 ENSG00000187730.7 GABRD chr1 2019324 2030751 + protein_coding KNOWN OTTHUMG00000041064.2 11428 1928 9 ENSG00000132122.10 SPATA6 chr1 48295372 48472208 - protein_coding KNOWN OTTHUMG00000007794.3 176837 5939 84 ENSG00000249159.5 RP11-480D4.2 chr5 8387638 8457564 - lincRNA NOVEL OTTHUMG00000161712.2 69927 695 8 ENSG00000251549.2 RP11-480D4.5 chr5 8410789 8410996 - unprocessed_pseudogene KNOWN OTTHUMG00000162187.2 208 208 1 ENSG00000272049.1 RP11-480D4.6 chr5 8444949 8445535 - lincRNA NOVEL OTTHUMG00000185686.1 587 587 1 ENSG00000247516.4 MIR4458HG chr5 8450743 8463095 + lincRNA NOVEL OTTHUMG00000161710.2 12353 4339 6 ENSG00000250037.1 RP11-480D4.4 chr5 8455946 8456558 - unprocessed_pseudogene KNOWN OTTHUMG00000161713.2 613 613 1 ENSG00000279075.1 RP11-480D4.7 chr5 8458842 8459183 + TEC KNOWN OTTHUMG00000185687.1 342 342 1 ENSG00000273868.1 MIR4458 chr5 8460925 8460999 + miRNA KNOWN NA 75 75 1 ENSG00000249782.1 RP11-417J1.1 chr5 8525179 8528679 + lincRNA NOVEL OTTHUMG00000161716.1 3501 335 2 ENSG00000279097.1 RP11-417J1.5 chr5 8572047 8572206 + TEC KNOWN OTTHUMG00000175409.1 160 160 1 ENSG00000279264.1 RP11-417J1.6 chr5 8614356 8614696 + TEC KNOWN OTTHUMG00000175411.1 341 341 1 ENSG00000224986.2 PPP1R8P1 chr1 48325080 48326123 - processed_pseudogene KNOWN OTTHUMG00000007792.2 1044 1044 1 ENSG00000250389.1 MTND6P2 chr5 8618581 8619104 - processed_pseudogene KNOWN OTTHUMG00000161719.1 524 524 1 ENSG00000248765.1 RP11-417J1.3 chr5 8619178 8620310 + processed_pseudogene KNOWN OTTHUMG00000161721.1 1133 1133 1 ENSG00000279002.1 RP11-417J1.7 chr5 8659764 8660059 - TEC KNOWN OTTHUMG00000175412.1 296 296 1 ENSG00000280373.1 RP11-417J1.8 chr5 8669018 8669250 - TEC KNOWN OTTHUMG00000175413.1 233 233 1 ENSG00000279125.1 RP11-417J1.4 chr5 8685581 8685816 - TEC KNOWN OTTHUMG00000174469.1 236 236 1 ENSG00000280438.1 RP11-315A16.2 chr5 8717684 8717883 - TEC KNOWN OTTHUMG00000174461.1 200 200 1 ENSG00000278877.1 RP11-315A16.3 chr5 8754869 8755159 + TEC KNOWN OTTHUMG00000175406.1 291 291 1 ENSG00000260981.1 RP11-315A16.1 chr5 8785042 8785468 - lincRNA NOVEL OTTHUMG00000173420.1 427 427 1 ENSG00000280185.1 RP11-315A16.4 chr5 8793875 8794197 + TEC KNOWN OTTHUMG00000175414.1 323 323 1 ENSG00000250198.1 RP11-143A12.3 chr5 8839732 8881525 + lincRNA NOVEL OTTHUMG00000161722.1 41794 3543 8 ENSG00000206700.1 RNU6-723P chr1 48344209 48344315 + snRNA KNOWN NA 107 107 1 ENSG00000281755.1 AC091895.1 chr5 8949409 8949550 + miRNA NOVEL NA 142 142 1 ENSG00000279635.1 RP11-143A12.1 chr5 8980404 8980659 - TEC KNOWN OTTHUMG00000175427.1 256 256 1 ENSG00000250619.1 CTD-2215L10.1 chr5 9001774 9045940 + antisense NOVEL OTTHUMG00000161752.1 44167 805 6 ENSG00000112902.10 SEMA5A chr5 9035026 9546075 - protein_coding KNOWN OTTHUMG00000090501.3 511050 12097 41 ENSG00000266415.1 MIR4636 chr5 9053816 9053895 - miRNA KNOWN NA 80 80 1 ENSG00000248537.1 CTD-2201E9.4 chr5 9363275 9422481 + antisense NOVEL OTTHUMG00000161754.1 59207 391 4 ENSG00000279698.1 CTD-2201E9.3 chr5 9498401 9498775 - TEC KNOWN OTTHUMG00000161720.1 375 375 1 ENSG00000251370.1 CTD-2201E9.1 chr5 9511333 9518086 + lincRNA NOVEL OTTHUMG00000161718.1 6754 1679 3 ENSG00000250001.1 CTD-2201E9.2 chr5 9519853 9523178 - sense_intronic NOVEL OTTHUMG00000161717.1 3326 543 2 ENSG00000250786.1 SNHG18 chr5 9546200 9550609 + lincRNA NOVEL OTTHUMG00000161753.1 4410 1951 5 ENSG00000235105.1 RP11-329A14.1 chr1 48435967 48437223 + processed_pseudogene KNOWN OTTHUMG00000007790.1 1257 1257 1 ENSG00000239112.1 SNORD123 chr5 9548836 9548905 + snoRNA KNOWN NA 70 70 1 ENSG00000248525.2 CTD-2001E22.1 chr5 9621377 9658458 - sense_overlapping NOVEL OTTHUMG00000161687.2 37082 420 3 ENSG00000169777.6 TAS2R1 chr5 9628997 9712378 - protein_coding KNOWN OTTHUMG00000090500.3 83382 1727 6 ENSG00000249781.5 CTD-2143L24.1 chr5 9641305 9903826 - lincRNA NOVEL OTTHUMG00000161688.3 262522 2487 28 ENSG00000222054.1 RNA5SP177 chr5 9760907 9761013 + rRNA KNOWN NA 107 107 1 ENSG00000250814.1 RP11-447B18.1 chr5 9854377 9889937 + lincRNA NOVEL OTTHUMG00000161686.1 35561 499 2 ENSG00000279011.1 RP11-191F9.4 chr5 10057502 10057807 + TEC KNOWN OTTHUMG00000175429.1 306 306 1 ENSG00000279755.1 RP11-191F9.2 chr5 10064243 10064476 - TEC KNOWN OTTHUMG00000173429.1 234 234 1 ENSG00000278874.1 RP11-191F9.3 chr5 10070531 10070841 + TEC KNOWN OTTHUMG00000175425.1 311 311 1 ENSG00000280016.1 RP11-191F9.1 chr5 10082571 10082772 + TEC KNOWN OTTHUMG00000173428.1 202 202 1 ENSG00000223175.1 RNU4-61P chr1 48447936 48448042 + snRNA KNOWN NA 107 107 1 ENSG00000249807.1 CTD-2199O4.1 chr5 10137138 10138365 + lincRNA NOVEL OTTHUMG00000161773.1 1228 943 2 ENSG00000280449.1 CTD-2199O4.4 chr5 10168783 10169006 + TEC KNOWN OTTHUMG00000173464.1 224 224 1 ENSG00000280368.1 CTD-2199O4.5 chr5 10171030 10171214 - TEC KNOWN OTTHUMG00000173466.1 185 185 1 ENSG00000260515.1 CTD-2199O4.3 chr5 10195121 10197628 - lincRNA NOVEL OTTHUMG00000173463.1 2508 2508 1 ENSG00000271998.1 CTD-2199O4.7 chr5 10195187 10197622 - lincRNA NOVEL OTTHUMG00000185435.1 2436 2436 1 ENSG00000272417.1 CTD-2199O4.6 chr5 10203600 10204040 - lincRNA NOVEL OTTHUMG00000185436.1 441 441 1 ENSG00000150756.12 FAM173B chr5 10226330 10249897 - protein_coding KNOWN OTTHUMG00000161771.4 23568 2462 33 ENSG00000248968.1 CTD-2256P15.1 chr5 10248325 10249915 + antisense NOVEL OTTHUMG00000161772.1 1591 688 2 ENSG00000150753.10 CCT5 chr5 10249921 10266412 + protein_coding KNOWN OTTHUMG00000131042.7 16492 5839 86 ENSG00000271980.1 CTD-2256P15.4 chr5 10264597 10267146 - antisense NOVEL OTTHUMG00000185437.1 2550 2550 1 ENSG00000232514.1 RP11-329A14.2 chr1 48497263 48497736 - processed_pseudogene KNOWN OTTHUMG00000007791.1 474 474 1 ENSG00000271715.1 CTD-2256P15.5 chr5 10269489 10269918 - lincRNA NOVEL OTTHUMG00000185438.1 430 430 1 ENSG00000164237.7 CMBL chr5 10275875 10308026 - protein_coding KNOWN OTTHUMG00000131043.2 32152 3324 25 ENSG00000252341.1 Y_RNA chr5 10292041 10292148 - misc_RNA NOVEL NA 108 108 1 ENSG00000252671.1 Y_RNA chr5 10337277 10337386 + misc_RNA NOVEL NA 110 110 1 ENSG00000280369.1 CTD-2256P15.3 chr5 10342813 10343131 + TEC KNOWN OTTHUMG00000175426.1 319 319 1 ENSG00000259802.1 CTD-2256P15.2 chr5 10352701 10353601 - antisense NOVEL OTTHUMG00000175391.1 901 901 1 ENSG00000145495.13 MARCH6 chr5 10353703 10440388 + protein_coding KNOWN OTTHUMG00000162027.3 86686 11336 151 ENSG00000277064.1 AC012640.1 chr5 10353897 10353972 + miRNA NOVEL NA 76 76 1 ENSG00000250600.1 ROPN1L-AS1 chr5 10441290 10441792 - antisense NOVEL OTTHUMG00000162052.1 503 189 2 ENSG00000145491.10 ROPN1L chr5 10441524 10472029 + protein_coding KNOWN OTTHUMG00000090507.2 30506 1817 25 ENSG00000186094.15 AGBL4 chr1 48532855 50023913 - protein_coding KNOWN OTTHUMG00000007793.5 1491059 7462 48 ENSG00000277073.1 MIR6131 chr5 10478037 10478145 + miRNA KNOWN NA 109 109 1 ENSG00000246016.2 LINC01513 chr5 10479371 10482309 + antisense NOVEL OTTHUMG00000162053.1 2939 483 2 ENSG00000244361.1 RPL30P7 chr5 10488820 10489142 + processed_pseudogene KNOWN OTTHUMG00000157613.2 323 323 1 ENSG00000249166.1 RP11-1C1.6 chr5 10493291 10494094 - lincRNA NOVEL OTTHUMG00000162054.1 804 415 2 ENSG00000249396.1 RP11-1C1.4 chr5 10493527 10502728 - lincRNA NOVEL OTTHUMG00000162051.1 9202 2130 3 ENSG00000249160.3 RP11-1C1.5 chr5 10504996 10522084 - lincRNA NOVEL OTTHUMG00000162049.2 17089 1103 6 ENSG00000280017.1 RP11-54F2.9 chr5 10541454 10543192 + TEC KNOWN OTTHUMG00000186587.1 1739 1739 1 ENSG00000279450.1 RP11-54F2.8 chr5 10556582 10556815 + TEC KNOWN OTTHUMG00000175415.1 234 234 1 ENSG00000164236.10 ANKRD33B chr5 10564330 10657816 + protein_coding KNOWN OTTHUMG00000162050.5 93487 9783 9 ENSG00000250106.1 ANKRD33B-AS1 chr5 10627260 10628225 - antisense NOVEL OTTHUMG00000162124.1 966 522 2 ENSG00000162373.11 BEND5 chr1 48727523 48776969 - protein_coding KNOWN OTTHUMG00000008153.3 49447 2138 21 ENSG00000251196.1 RP11-54F2.1 chr5 10652211 10655925 - unprocessed_pseudogene KNOWN OTTHUMG00000162121.1 3715 800 2 ENSG00000251548.1 RP11-215G15.4 chr5 10664495 10665113 - processed_pseudogene KNOWN OTTHUMG00000162120.1 619 619 1 ENSG00000279979.1 CTD-2154B17.3 chr5 10675317 10675575 - TEC KNOWN OTTHUMG00000175423.1 259 259 1 ENSG00000278865.1 CTD-2154B17.2 chr5 10676096 10676423 - TEC KNOWN OTTHUMG00000173430.1 328 328 1 ENSG00000112977.14 DAP chr5 10679230 10761272 - protein_coding KNOWN OTTHUMG00000131041.3 82043 3361 19 ENSG00000272324.4 CTD-2154B17.4 chr5 10761065 10770294 + antisense NOVEL OTTHUMG00000185440.1 9230 377 5 ENSG00000250576.1 CTD-2154B17.1 chr5 10775058 10777062 - lincRNA NOVEL OTTHUMG00000162122.1 2005 342 2 ENSG00000169862.17 CTNND2 chr5 10971840 11904043 - protein_coding KNOWN OTTHUMG00000090511.4 932204 6863 176 ENSG00000207312.1 RNU6-429P chr5 11027200 11027307 + snRNA KNOWN NA 108 108 1 ENSG00000212305.1 RNU6-679P chr5 12297399 12297504 - snRNA KNOWN NA 106 106 1 ENSG00000229846.1 RP11-141A19.1 chr1 49048316 49187585 + antisense NOVEL OTTHUMG00000008154.1 139270 713 3 ENSG00000248783.1 RP11-308B16.2 chr5 12553890 12574637 - lincRNA NOVEL OTTHUMG00000161759.1 20748 372 3 ENSG00000248131.4 LINC01194 chr5 12574857 12804363 + lincRNA NOVEL OTTHUMG00000161760.1 229507 1871 11 ENSG00000264921.1 AC106771.1 chr5 12599623 12599700 + miRNA NOVEL NA 78 78 1 ENSG00000251112.2 RP11-419C19.3 chr5 12794100 12794731 - processed_pseudogene KNOWN OTTHUMG00000161743.2 632 632 1 ENSG00000249053.1 RP11-419C19.1 chr5 12794731 12795522 + processed_pseudogene KNOWN OTTHUMG00000161744.1 792 792 1 ENSG00000248457.1 RP11-419C19.2 chr5 12914068 13032886 - lincRNA NOVEL OTTHUMG00000161742.1 118819 270 3 ENSG00000248145.1 CTC-305H11.1 chr5 13175846 13179572 + lincRNA NOVEL OTTHUMG00000162193.1 3727 249 2 ENSG00000242608.1 RPS23P5 chr5 13250235 13250662 - processed_pseudogene KNOWN OTTHUMG00000157616.1 428 428 1 ENSG00000281215.1 AC010364.1 chr5 13504347 13504477 + miRNA NOVEL NA 131 131 1 ENSG00000248462.1 NENFP3 chr5 13553654 13553966 - processed_pseudogene KNOWN OTTHUMG00000161748.1 313 313 1 ENSG00000230114.1 RP11-141A19.2 chr1 49257411 49269285 + antisense NOVEL OTTHUMG00000008156.1 11875 566 4 ENSG00000243744.2 CTC-232H10.1 chr5 13637919 13638381 - processed_pseudogene KNOWN OTTHUMG00000157617.2 463 463 1 ENSG00000039139.9 DNAH5 chr5 13690331 13944543 - protein_coding KNOWN OTTHUMG00000090533.4 254213 16475 99 ENSG00000251423.1 CTB-51A17.1 chr5 13860338 13897771 + antisense NOVEL OTTHUMG00000161749.1 37434 612 3 ENSG00000280702.1 AC016576.1 chr5 13919797 13919874 - miRNA NOVEL NA 78 78 1 ENSG00000038382.16 TRIO chr5 14143702 14532128 + protein_coding KNOWN OTTHUMG00000131057.9 388427 17500 313 ENSG00000281325.1 AC016549.1 chr5 14341288 14343089 + protein_coding KNOWN NA 1802 1802 1 ENSG00000275686.1 AC016656.1 chr5 14434723 14434815 - miRNA NOVEL NA 93 93 1 ENSG00000145569.5 FAM105A chr5 14581775 14615007 + protein_coding KNOWN OTTHUMG00000131056.4 33233 4074 14 ENSG00000248791.1 CTD-2165H16.3 chr5 14620020 14621313 + processed_pseudogene KNOWN OTTHUMG00000161825.1 1294 1294 1 ENSG00000250526.1 CCT6P2 chr5 14639426 14641018 - processed_pseudogene KNOWN OTTHUMG00000161827.3 1593 1593 1 ENSG00000226969.1 RP11-547D24.3 chr1 2049203 2050070 - antisense NOVEL OTTHUMG00000041087.1 868 538 5 ENSG00000225623.1 AGBL4-IT1 chr1 49374201 49472085 - sense_intronic NOVEL OTTHUMG00000008155.1 97885 514 4 ENSG00000250182.3 EEF1A1P13 chr5 14651941 14653329 - processed_pseudogene KNOWN OTTHUMG00000161826.2 1389 1389 1 ENSG00000261360.1 CTD-2165H16.4 chr5 14661808 14664604 - antisense NOVEL OTTHUMG00000174145.1 2797 2797 6 ENSG00000154124.4 OTULIN chr5 14664664 14699711 + protein_coding KNOWN OTTHUMG00000161762.1 35048 8614 22 ENSG00000154122.11 ANKH chr5 14704804 14871778 - protein_coding KNOWN OTTHUMG00000090539.2 166975 10865 31 ENSG00000249485.1 RBBP4P1 chr5 14797125 14798400 - processed_pseudogene KNOWN OTTHUMG00000161817.1 1276 1276 1 ENSG00000264792.1 MIR4637 chr5 14825929 14826012 - miRNA KNOWN NA 84 84 1 ENSG00000272057.1 CTB-40H15.4 chr5 14872332 14872713 + lincRNA NOVEL OTTHUMG00000185443.1 382 382 1 ENSG00000249928.2 UQCRBP3 chr5 14874400 14874711 - processed_pseudogene KNOWN OTTHUMG00000161815.2 312 312 1 ENSG00000250662.1 HNRNPKP5 chr5 14877667 14877919 - processed_pseudogene KNOWN OTTHUMG00000161816.1 253 253 1 ENSG00000212036.2 AC016575.1 chr5 14910558 14910640 - miRNA NOVEL NA 83 83 1 ENSG00000237478.2 RP5-926E3.1 chr1 49691262 49691523 - processed_pseudogene KNOWN OTTHUMG00000007800.2 262 262 1 ENSG00000250247.1 SEPHS2P1 chr5 14960232 14961393 + processed_pseudogene KNOWN OTTHUMG00000161763.1 1162 1162 1 ENSG00000202269.1 U8 chr5 15110786 15110920 - snoRNA NOVEL NA 135 135 1 ENSG00000249332.1 RP1-251I12.1 chr5 15112377 15117007 - lincRNA NOVEL OTTHUMG00000161792.1 4631 822 3 ENSG00000248486.1 RP1-137K24.1 chr5 15192139 15266541 - lincRNA NOVEL OTTHUMG00000161793.1 74403 558 3 ENSG00000248834.2 MARK2P5 chr5 15384220 15384853 + processed_pseudogene KNOWN OTTHUMG00000161794.2 634 634 1 ENSG00000248699.1 CTD-2313D3.1 chr5 15450701 15451811 + processed_pseudogene KNOWN OTTHUMG00000161796.1 1111 1111 1 ENSG00000183580.9 FBXL7 chr5 15500196 15939795 + protein_coding KNOWN OTTHUMG00000161798.1 439600 4854 10 ENSG00000250250.1 CTD-2350J17.1 chr5 15602189 15607348 - antisense NOVEL OTTHUMG00000161797.1 5160 632 4 ENSG00000216077.2 MIR887 chr5 15935159 15935272 + miRNA KNOWN NA 114 114 1 ENSG00000222312.1 RNA5SP178 chr5 16033229 16033356 - rRNA KNOWN NA 128 128 1 ENSG00000215887.5 ZNF859P chr1 49841821 49846400 + unprocessed_pseudogene KNOWN OTTHUMG00000008273.2 4580 1966 3 ENSG00000183654.8 MARCH11 chr5 16067139 16180762 - protein_coding KNOWN OTTHUMG00000161789.2 113624 1861 9 ENSG00000250981.1 RP11-19O2.1 chr5 16129178 16141602 + antisense NOVEL OTTHUMG00000161791.1 12425 708 2 ENSG00000250448.1 RP11-19O2.2 chr5 16180238 16185585 + antisense NOVEL OTTHUMG00000161785.1 5348 2066 2 ENSG00000248403.1 NACAP6 chr5 16192088 16192709 - processed_pseudogene KNOWN OTTHUMG00000161790.2 622 622 1 ENSG00000248150.1 RP1-167G20.1 chr5 16373361 16440081 - lincRNA NOVEL OTTHUMG00000161787.1 66721 2120 8 ENSG00000249737.1 RP1-167G20.2 chr5 16428536 16432436 + antisense NOVEL OTTHUMG00000161786.1 3901 458 3 ENSG00000173545.4 ZNF622 chr5 16451519 16465792 - protein_coding KNOWN OTTHUMG00000090567.1 14274 1699 6 ENSG00000154153.12 FAM134B chr5 16473038 16617058 - protein_coding KNOWN OTTHUMG00000161788.1 144021 4568 31 ENSG00000246214.1 RP11-260E18.1 chr5 16615926 16629969 + antisense NOVEL OTTHUMG00000161824.1 14044 1674 4 ENSG00000250415.1 CTC-461F20.1 chr5 16617225 16621276 + lincRNA NOVEL OTTHUMG00000161823.1 4052 704 4 ENSG00000221746.1 AL645730.1 chr1 49982215 49982295 + miRNA NOVEL NA 81 81 1 ENSG00000201370.1 Y_RNA chr5 16623004 16623095 - misc_RNA NOVEL NA 92 92 1 ENSG00000145555.13 MYO10 chr5 16661914 16936276 - protein_coding KNOWN OTTHUMG00000161822.3 274363 13963 183 ENSG00000253093.1 RNA5SP179 chr5 16853994 16854114 + rRNA KNOWN NA 121 121 1 ENSG00000243538.1 CTB-55B8.1 chr5 16902294 16902641 - processed_pseudogene KNOWN OTTHUMG00000157620.1 348 348 1 ENSG00000201436.1 RNU6-660P chr5 16941843 16941951 - snRNA KNOWN NA 109 109 1 ENSG00000176788.8 BASP1 chr5 17065598 17276843 + protein_coding KNOWN OTTHUMG00000131061.5 211246 2217 8 ENSG00000271892.1 CTD-2228A4.1 chr5 17107360 17107789 - lincRNA NOVEL OTTHUMG00000185444.1 430 430 1 ENSG00000206814.1 Y_RNA chr5 17117576 17117686 - misc_RNA NOVEL NA 111 111 1 ENSG00000215196.4 AC091878.1 chr5 17130028 17217047 - antisense NOVEL OTTHUMG00000131059.3 87020 2941 3 ENSG00000251990.1 RNA5SP180 chr5 17156971 17157071 - rRNA KNOWN NA 101 101 1 ENSG00000279324.1 RP11-93G23.2 chr1 49994318 49996218 + TEC KNOWN OTTHUMG00000187049.1 1901 1901 1 ENSG00000250816.1 DCAF13P2 chr5 17202274 17203145 + processed_pseudogene KNOWN OTTHUMG00000160375.1 872 555 2 ENSG00000252908.1 RNU6-1003P chr5 17240611 17240715 + snRNA KNOWN NA 105 105 1 ENSG00000185296.8 CTD-2139B15.1 chr5 17306381 17306960 + processed_pseudogene KNOWN OTTHUMG00000161867.1 580 580 1 ENSG00000201715.1 RN7SKP133 chr5 17345616 17345955 + misc_RNA KNOWN NA 340 340 1 ENSG00000223361.5 FTH1P10 chr5 17353695 17354624 - transcribed_processed_pseudogene KNOWN OTTHUMG00000161872.1 930 930 2 ENSG00000248223.1 CTD-2139B15.2 chr5 17353910 17354899 + lincRNA NOVEL OTTHUMG00000161870.1 990 867 2 ENSG00000249199.1 CTD-2139B15.5 chr5 17369225 17375577 - lincRNA NOVEL OTTHUMG00000161875.1 6353 285 2 ENSG00000250822.1 CTD-2139B15.4 chr5 17378906 17387310 - lincRNA NOVEL OTTHUMG00000161877.1 8405 2312 3 ENSG00000248455.4 RP11-321E2.3 chr5 17404019 17441694 + lincRNA NOVEL OTTHUMG00000161871.1 37676 979 6 ENSG00000249662.4 RP11-321E2.4 chr5 17444010 17483946 + lincRNA NOVEL OTTHUMG00000161869.1 39937 886 5 ENSG00000233595.2 MTND2P29 chr1 50017092 50017503 + processed_pseudogene KNOWN OTTHUMG00000008274.2 412 412 1 ENSG00000251304.3 RP11-321E2.5 chr5 17486231 17486825 + processed_pseudogene KNOWN OTTHUMG00000161868.1 595 595 1 ENSG00000268799.2 RP11-321E2.13 chr5 17491361 17491769 - processed_pseudogene KNOWN OTTHUMG00000161874.2 409 409 1 ENSG00000250667.1 RP11-321E2.12 chr5 17495658 17495826 - processed_pseudogene KNOWN OTTHUMG00000161876.1 169 169 1 ENSG00000185041.5 RP11-321E2.6 chr5 17498231 17498825 + processed_pseudogene KNOWN OTTHUMG00000161862.1 595 595 1 ENSG00000248205.1 RP11-321E2.11 chr5 17502043 17502363 - processed_pseudogene KNOWN OTTHUMG00000161878.1 321 321 1 ENSG00000249620.1 RP11-321E2.10 chr5 17511833 17512238 - processed_pseudogene KNOWN OTTHUMG00000161866.1 406 406 1 ENSG00000248861.1 RP11-321E2.2 chr5 17518366 17518960 + processed_pseudogene KNOWN OTTHUMG00000161861.1 595 595 1 ENSG00000249339.1 RP11-321E2.7 chr5 17521801 17522395 + processed_pseudogene KNOWN OTTHUMG00000161863.1 595 595 1 ENSG00000250055.1 RP11-321E2.8 chr5 17525235 17525829 + processed_pseudogene KNOWN OTTHUMG00000161865.1 595 595 1 ENSG00000250296.1 RP11-321E2.9 chr5 17528669 17529263 + processed_pseudogene KNOWN OTTHUMG00000161864.1 595 595 1 ENSG00000162374.15 ELAVL4 chr1 50048014 50203786 + protein_coding KNOWN OTTHUMG00000007877.4 155773 6963 68 ENSG00000250807.3 RP11-432M8.2 chr5 17585162 17585758 - processed_pseudogene KNOWN OTTHUMG00000161858.1 597 597 1 ENSG00000250088.1 RP11-432M8.1 chr5 17587290 17587523 - processed_pseudogene KNOWN OTTHUMG00000161850.1 234 234 1 ENSG00000250558.1 RP11-432M8.3 chr5 17590364 17590960 - processed_pseudogene KNOWN OTTHUMG00000161852.1 597 597 1 ENSG00000249427.1 RP11-432M8.4 chr5 17593798 17594394 - processed_pseudogene KNOWN OTTHUMG00000161854.1 597 597 1 ENSG00000249329.1 RP11-432M8.5 chr5 17597232 17597828 - processed_pseudogene KNOWN OTTHUMG00000161857.1 597 597 1 ENSG00000248422.1 RP11-432M8.7 chr5 17598432 17598559 - processed_pseudogene KNOWN OTTHUMG00000161855.1 128 128 1 ENSG00000249282.1 RP11-432M8.6 chr5 17601882 17602134 - processed_pseudogene KNOWN OTTHUMG00000161849.1 253 253 1 ENSG00000249357.3 RP11-432M8.8 chr5 17604781 17605377 + processed_pseudogene KNOWN OTTHUMG00000161856.1 597 597 1 ENSG00000249156.1 RP11-432M8.9 chr5 17610990 17611583 + processed_pseudogene KNOWN OTTHUMG00000161851.1 594 594 1 ENSG00000271296.1 RP11-432M8.20 chr5 17614781 17615111 - processed_pseudogene KNOWN OTTHUMG00000184297.1 331 331 1 ENSG00000230828.1 RP11-492I2.1 chr1 50114937 50115282 + processed_pseudogene KNOWN OTTHUMG00000007880.1 346 346 1 ENSG00000250351.1 RP11-432M8.10 chr5 17620533 17620939 - processed_pseudogene KNOWN OTTHUMG00000161841.1 407 407 1 ENSG00000250386.1 RP11-432M8.11 chr5 17625551 17625959 - processed_pseudogene KNOWN OTTHUMG00000161842.1 409 409 1 ENSG00000249666.1 RP11-432M8.12 chr5 17632088 17632683 + processed_pseudogene KNOWN OTTHUMG00000161847.1 596 596 1 ENSG00000250782.1 RP11-432M8.13 chr5 17634460 17635053 + processed_pseudogene KNOWN OTTHUMG00000161848.1 594 594 1 ENSG00000248471.2 RP11-432M8.15 chr5 17642962 17643228 - processed_pseudogene KNOWN OTTHUMG00000161845.2 267 267 1 ENSG00000248160.1 RP11-432M8.14 chr5 17647712 17647944 - processed_pseudogene KNOWN OTTHUMG00000161840.1 233 233 1 ENSG00000248542.2 RP11-432M8.16 chr5 17649046 17649643 + processed_pseudogene KNOWN OTTHUMG00000161860.2 598 598 1 ENSG00000248337.1 RP11-432M8.18 chr5 17654373 17654643 - processed_pseudogene KNOWN OTTHUMG00000161853.1 271 271 1 ENSG00000269466.2 RP11-432M8.17 chr5 17655129 17655538 - processed_pseudogene KNOWN OTTHUMG00000161844.2 410 410 1 ENSG00000274832.1 RP11-432M8.21 chr5 17669283 17669518 - processed_pseudogene KNOWN OTTHUMG00000187568.1 236 236 1 ENSG00000237337.1 RP11-567C20.2 chr1 50174306 50175868 - antisense NOVEL OTTHUMG00000007879.1 1563 858 2 ENSG00000250715.1 RP11-432M8.19 chr5 17670168 17670571 - processed_pseudogene KNOWN OTTHUMG00000161846.1 404 404 1 ENSG00000249937.4 RP11-454P21.1 chr5 17684584 17955857 + lincRNA NOVEL OTTHUMG00000161859.1 271274 1236 15 ENSG00000240785.1 RPL36AP21 chr5 18049550 18049872 + processed_pseudogene KNOWN OTTHUMG00000157629.1 323 323 1 ENSG00000212278.1 SNORD81 chr5 18236123 18236196 + snoRNA NOVEL NA 74 74 1 ENSG00000241552.3 RN7SL58P chr5 18547312 18547605 + misc_RNA KNOWN NA 294 294 1 ENSG00000248693.1 CTD-2023M8.1 chr5 18704433 18746173 - lincRNA NOVEL OTTHUMG00000161873.1 41741 238 2 ENSG00000249191.1 UBE2V1P12 chr5 18886622 18887095 - processed_pseudogene KNOWN OTTHUMG00000161782.1 474 474 1 ENSG00000249927.1 CTD-2151L9.2 chr5 18893902 18894168 - processed_pseudogene KNOWN OTTHUMG00000161781.1 267 267 1 ENSG00000249285.1 RP11-81B23.1 chr5 18908866 18909543 + processed_pseudogene KNOWN OTTHUMG00000161784.1 678 678 1 ENSG00000276764.1 Metazoa_SRP chr5 18958147 18958413 - misc_RNA NOVEL NA 267 267 1 ENSG00000233407.1 RP11-567C20.3 chr1 50206084 50223127 - antisense NOVEL OTTHUMG00000007882.1 17044 250 2 ENSG00000281138.1 AC114981.1 chr5 18958153 18958237 - miRNA NOVEL NA 85 85 1 ENSG00000249174.1 RP11-124N3.3 chr5 18965861 19142346 - lincRNA NOVEL OTTHUMG00000161808.1 176486 660 2 ENSG00000251487.1 RP11-124N3.2 chr5 19035197 19038799 - lincRNA NOVEL OTTHUMG00000161783.1 3603 1157 5 ENSG00000242654.1 RPL32P14 chr5 19041009 19041386 + processed_pseudogene KNOWN OTTHUMG00000157630.1 378 378 1 ENSG00000249557.2 HSPD1P15 chr5 19233366 19234487 + processed_pseudogene KNOWN OTTHUMG00000161809.2 1122 1122 1 ENSG00000145526.10 CDH18 chr5 19472951 20575873 - protein_coding KNOWN OTTHUMG00000090578.4 1102923 4853 100 ENSG00000264928.1 AC118463.1 chr5 19735510 19735561 - miRNA NOVEL NA 52 52 1 ENSG00000248766.2 RP11-61K20.1 chr5 20158662 20158956 - processed_pseudogene KNOWN OTTHUMG00000162016.2 295 295 1 ENSG00000214132.4 RP11-420O16.2 chr5 20304045 20305448 - processed_pseudogene KNOWN OTTHUMG00000162014.1 1404 1404 1 ENSG00000249854.1 RP11-420O16.1 chr5 20305565 20331456 + lincRNA NOVEL OTTHUMG00000162015.1 25892 424 2 ENSG00000067606.14 PRKCZ chr1 2050470 2185395 + protein_coding KNOWN OTTHUMG00000001238.12 134926 7636 204 ENSG00000234080.3 RP11-183G22.1 chr1 50326131 50327007 + processed_pseudogene KNOWN OTTHUMG00000007878.1 877 877 1 ENSG00000251629.5 RP11-774D14.1 chr5 20611840 20937691 + lincRNA NOVEL OTTHUMG00000162067.2 325852 1926 23 ENSG00000249490.1 CTD-2333M24.1 chr5 20612625 20614765 - lincRNA NOVEL OTTHUMG00000162017.1 2141 509 2 ENSG00000248308.1 RP11-697E23.1 chr5 20830166 20830947 - processed_pseudogene KNOWN OTTHUMG00000161952.1 782 782 1 ENSG00000248286.1 RP11-811J10.1 chr5 21196720 21196860 + processed_pseudogene KNOWN OTTHUMG00000161951.1 141 141 1 ENSG00000249359.2 RP11-374A4.1 chr5 21323873 21341375 - lincRNA NOVEL OTTHUMG00000162363.2 17503 5454 3 ENSG00000183666.15 GUSBP1 chr5 21341833 21589372 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000161915.4 247540 6150 28 ENSG00000233974.3 RP11-823P9.3 chr5 21481327 21484011 - processed_pseudogene KNOWN OTTHUMG00000161998.1 2685 2685 1 ENSG00000279107.1 RP11-823P9.4 chr5 21493436 21494596 + TEC KNOWN OTTHUMG00000186588.1 1161 1161 1 ENSG00000272130.1 RP11-360I2.1 chr5 21569755 21570045 + lincRNA NOVEL OTTHUMG00000185450.1 291 291 1 ENSG00000253766.1 RP11-804N13.1 chr5 21616262 21779522 + antisense NOVEL OTTHUMG00000163825.1 163261 852 4 ENSG00000229316.1 HMGB1P45 chr1 50398825 50399773 - processed_pseudogene KNOWN OTTHUMG00000007881.1 949 653 2 ENSG00000221615.1 AC140132.1 chr5 21734211 21734304 + miRNA NOVEL NA 94 94 1 ENSG00000154162.12 CDH12 chr5 21750673 22853622 - protein_coding KNOWN OTTHUMG00000090591.4 1102950 5940 86 ENSG00000213430.6 HSPD1P1 chr5 21882585 21884310 + processed_pseudogene KNOWN OTTHUMG00000161914.1 1726 1726 1 ENSG00000253104.1 RP11-855C21.1 chr5 22139247 22141468 - sense_intronic NOVEL OTTHUMG00000163826.1 2222 501 3 ENSG00000168967.13 PMCHL1 chr5 22142352 22152356 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000090661.4 10005 1917 14 ENSG00000249206.2 GCNT1P2 chr5 22580225 22580819 - processed_pseudogene KNOWN OTTHUMG00000161913.2 595 595 1 ENSG00000249404.1 CTD-2234B20.1 chr5 23013048 23014527 + lincRNA NOVEL OTTHUMG00000161916.1 1480 440 2 ENSG00000250319.1 CTD-2272G21.3 chr5 23262159 23263185 - processed_pseudogene KNOWN OTTHUMG00000161920.1 1027 677 2 ENSG00000206912.1 Y_RNA chr5 23299155 23299262 + misc_RNA NOVEL NA 108 108 1 ENSG00000250332.1 CTD-2272G21.2 chr5 23303565 23305143 - processed_pseudogene KNOWN OTTHUMG00000161923.1 1579 1579 1 ENSG00000225671.2 FCF1P6 chr1 50405430 50406024 - processed_pseudogene KNOWN OTTHUMG00000007883.2 595 595 1 ENSG00000249289.1 CTD-2272G21.1 chr5 23329427 23329892 - processed_pseudogene KNOWN OTTHUMG00000161921.1 466 466 1 ENSG00000248591.1 CTD-2351A8.1 chr5 23456468 23456850 + processed_pseudogene KNOWN OTTHUMG00000161922.1 383 383 1 ENSG00000164256.8 PRDM9 chr5 23507155 23528597 + protein_coding KNOWN OTTHUMG00000161918.1 21443 3864 15 ENSG00000249607.1 RP11-197O8.1 chr5 23688927 23689386 + processed_pseudogene KNOWN OTTHUMG00000161917.1 460 446 2 ENSG00000248874.4 C5orf17 chr5 23951348 24178263 + lincRNA KNOWN OTTHUMG00000161911.1 226916 1984 9 ENSG00000252083.1 SNORA40 chr5 23972188 23972294 - snoRNA NOVEL NA 107 107 1 ENSG00000234865.3 CTD-2138O14.1 chr5 23980587 23980938 + transcribed_processed_pseudogene KNOWN OTTHUMG00000161910.1 352 352 1 ENSG00000200600.1 Y_RNA chr5 23994502 23994603 - misc_RNA NOVEL NA 102 102 1 ENSG00000226432.3 CTD-2015B23.2 chr5 24170370 24171246 + processed_pseudogene KNOWN OTTHUMG00000161912.1 877 877 1 ENSG00000250694.1 CTD-2074D8.1 chr5 24352309 24353443 - lincRNA PUTATIVE OTTHUMG00000161885.1 1135 487 2 ENSG00000142700.10 DMRTA2 chr1 50417550 50423500 - protein_coding KNOWN OTTHUMG00000007884.3 5951 3225 5 ENSG00000277455.1 Metazoa_SRP chr5 24449351 24449615 - misc_RNA NOVEL NA 265 265 1 ENSG00000040731.9 CDH10 chr5 24487100 24644978 - protein_coding KNOWN OTTHUMG00000090667.2 157879 3660 31 ENSG00000251294.1 RP11-116O11.1 chr5 24554018 24613222 + antisense NOVEL OTTHUMG00000161879.1 59205 1791 3 ENSG00000249562.1 RP11-116O11.2 chr5 24578294 24578561 - processed_pseudogene KNOWN OTTHUMG00000161950.1 268 268 1 ENSG00000250099.1 RP11-12P19.2 chr5 24749374 24749772 - processed_pseudogene KNOWN OTTHUMG00000161886.1 399 399 1 ENSG00000248156.2 RP11-12P19.1 chr5 24786842 24787024 - processed_pseudogene KNOWN OTTHUMG00000161888.2 183 183 1 ENSG00000223004.1 SNORD29 chr5 24811481 24811548 + snoRNA NOVEL NA 68 68 1 ENSG00000248908.1 RP11-730N24.1 chr5 24835280 24840583 - lincRNA NOVEL OTTHUMG00000161889.1 5304 2290 3 ENSG00000250524.1 RP11-730N24.2 chr5 24881943 24885461 - lincRNA NOVEL OTTHUMG00000161887.1 3519 572 2 ENSG00000199911.1 Y_RNA chr5 24910594 24910695 + misc_RNA NOVEL NA 102 102 1 ENSG00000185104.18 FAF1 chr1 50437028 50960263 - protein_coding KNOWN OTTHUMG00000007930.6 523236 7545 63 ENSG00000251273.1 RP11-549K20.1 chr5 25126305 25190656 - lincRNA NOVEL OTTHUMG00000161956.1 64352 534 5 ENSG00000245662.2 RP11-184E9.1 chr5 25190682 25306172 + lincRNA NOVEL OTTHUMG00000161960.1 115491 937 5 ENSG00000251654.2 RP11-192H6.2 chr5 25218973 25298612 - lincRNA NOVEL OTTHUMG00000161962.2 79640 558 5 ENSG00000260761.1 RP11-184E9.2 chr5 25319834 25321346 + lincRNA NOVEL OTTHUMG00000161957.2 1513 1513 1 ENSG00000279671.1 RP11-184E9.3 chr5 25349841 25350073 + TEC KNOWN OTTHUMG00000161958.1 233 233 1 ENSG00000248605.4 CTD-2306M5.1 chr5 25404733 25445925 - lincRNA NOVEL OTTHUMG00000161959.1 41193 1154 9 ENSG00000279531.1 RP11-184E9.4 chr5 25425412 25425599 - TEC KNOWN OTTHUMG00000161955.1 188 188 1 ENSG00000201016.1 RNU6-374P chr5 25701217 25701324 - snRNA KNOWN NA 108 108 1 ENSG00000279869.1 CTD-2026A21.1 chr5 25716271 25716715 + TEC KNOWN OTTHUMG00000161963.1 445 445 1 ENSG00000251593.1 MSNP1 chr5 25909503 25911234 + processed_pseudogene KNOWN OTTHUMG00000161961.1 1732 1732 1 ENSG00000225767.1 RP5-850O15.3 chr1 50461469 50471150 + antisense NOVEL OTTHUMG00000007927.1 9682 503 5 ENSG00000222560.1 RNU4-43P chr5 26012889 26013025 + snRNA KNOWN NA 137 137 1 ENSG00000249099.1 RP11-351N6.1 chr5 26382519 26399819 - lincRNA NOVEL OTTHUMG00000161971.1 17301 487 5 ENSG00000277838.1 AC026426.1 chr5 26597022 26597131 + miRNA NOVEL NA 110 110 1 ENSG00000230571.2 CTD-2533K21.3 chr5 26669346 26669736 + processed_pseudogene KNOWN OTTHUMG00000161965.1 391 391 1 ENSG00000248426.1 CTD-2533K21.2 chr5 26669711 26669989 - processed_pseudogene KNOWN OTTHUMG00000161966.1 279 279 1 ENSG00000250703.1 CTD-2533K21.1 chr5 26670334 26670481 - processed_pseudogene KNOWN OTTHUMG00000161969.1 148 148 1 ENSG00000251033.1 CTD-2533K21.4 chr5 26711551 26749997 - lincRNA NOVEL OTTHUMG00000161970.1 38447 685 3 ENSG00000249616.1 CCNB3P1 chr5 26739753 26741183 - processed_pseudogene KNOWN OTTHUMG00000161967.1 1431 1431 1 ENSG00000113100.8 CDH9 chr5 26880600 27121150 - protein_coding KNOWN OTTHUMG00000090671.2 240551 4203 30 ENSG00000207261.1 RNU6-738P chr5 27111569 27111674 + snRNA KNOWN NA 106 106 1 ENSG00000280887.1 Y_RNA chr1 50499758 50499857 - misc_RNA NOVEL NA 100 100 1 ENSG00000248490.1 CTD-3007L5.1 chr5 27412613 27436411 - lincRNA NOVEL OTTHUMG00000161964.1 23799 491 4 ENSG00000250337.4 LINC01021 chr5 27472292 27496401 + lincRNA NOVEL OTTHUMG00000161968.1 24110 2638 26 ENSG00000221721.1 AC010455.1 chr5 27986175 27986285 - miRNA NOVEL NA 111 111 1 ENSG00000250079.1 RP11-560A7.1 chr5 28213359 28214559 - processed_pseudogene KNOWN OTTHUMG00000161924.1 1201 1201 1 ENSG00000249785.1 CTD-2061E9.1 chr5 28286389 28287665 - lincRNA NOVEL OTTHUMG00000161925.1 1277 523 2 ENSG00000252867.1 RNU6-909P chr5 28624657 28624763 + snRNA KNOWN NA 107 107 1 ENSG00000250453.1 CTD-2134P3.1 chr5 28782678 28809249 - lincRNA NOVEL OTTHUMG00000161934.1 26572 452 2 ENSG00000270495.1 CTD-2134P3.2 chr5 28808538 28809255 + processed_pseudogene KNOWN OTTHUMG00000184561.1 718 718 1 ENSG00000271035.1 CTD-2269E23.3 chr5 28897785 28898274 - processed_pseudogene KNOWN OTTHUMG00000184302.1 490 490 1 ENSG00000162685.6 LSP1P3 chr5 28926816 28927023 + processed_pseudogene KNOWN OTTHUMG00000161933.1 208 208 1 ENSG00000207194.1 RNU6-1026P chr1 50582404 50582511 + snRNA KNOWN NA 108 108 1 ENSG00000226400.2 CTD-2269E23.2 chr5 28927029 28927284 + processed_pseudogene KNOWN OTTHUMG00000161935.1 256 256 1 ENSG00000277878.1 CTD-2269E23.4 chr5 28927298 28927459 - processed_pseudogene KNOWN OTTHUMG00000187570.1 162 162 1 ENSG00000249226.1 SUCLG2P4 chr5 29001760 29003357 + processed_pseudogene KNOWN OTTHUMG00000160376.1 1598 1027 2 ENSG00000252601.1 SNORA18 chr5 29070496 29070610 + snoRNA NOVEL NA 115 115 1 ENSG00000248687.2 RP11-42L13.2 chr5 29104880 29105438 + unprocessed_pseudogene KNOWN OTTHUMG00000161932.2 559 263 2 ENSG00000270430.1 RP11-42L13.3 chr5 29105568 29106861 - processed_pseudogene KNOWN OTTHUMG00000184303.1 1294 1294 1 ENSG00000259786.5 CTD-2118P12.1 chr5 29143503 29217115 + lincRNA NOVEL OTTHUMG00000161936.3 73613 2816 31 ENSG00000248391.4 CTD-2010I22.2 chr5 29380296 29395981 - lincRNA NOVEL OTTHUMG00000161939.2 15686 671 8 ENSG00000276098.1 CTD-2345H1.1 chr5 29516005 29516504 + processed_pseudogene KNOWN OTTHUMG00000187572.1 500 500 1 ENSG00000248418.2 UBL5P1 chr5 29600676 29600868 + processed_pseudogene KNOWN OTTHUMG00000161938.3 193 193 1 ENSG00000230585.2 PHBP12 chr1 50780340 50781150 + processed_pseudogene KNOWN OTTHUMG00000007928.2 811 811 1 ENSG00000250984.1 CTD-2011G17.1 chr5 29795938 29796268 + processed_pseudogene KNOWN OTTHUMG00000161946.1 331 331 1 ENSG00000249744.1 CTD-2057J6.2 chr5 29848684 29849218 - processed_pseudogene KNOWN OTTHUMG00000161945.1 535 535 1 ENSG00000233787.3 CTD-2057J6.1 chr5 29881709 29882945 - processed_pseudogene KNOWN OTTHUMG00000161947.2 1237 1237 1 ENSG00000223136.1 RN7SKP207 chr5 29948828 29949130 + misc_RNA KNOWN NA 303 303 1 ENSG00000280305.1 CTD-2351A16.1 chr5 29979669 29983114 + TEC KNOWN OTTHUMG00000173436.1 3446 3446 1 ENSG00000275925.1 AC091856.1 chr5 30152739 30152840 + miRNA NOVEL NA 102 102 1 ENSG00000250587.2 RP11-136H13.1 chr5 30248350 30248893 + processed_pseudogene KNOWN OTTHUMG00000161944.2 544 544 1 ENSG00000250118.1 RP11-136H13.2 chr5 30365405 30365684 - processed_pseudogene KNOWN OTTHUMG00000161943.1 280 280 1 ENSG00000241668.2 RPL19P11 chr5 31053565 31054153 + processed_pseudogene KNOWN OTTHUMG00000157639.2 589 589 1 ENSG00000253940.1 CTD-2127O16.2 chr5 31065970 31066132 - processed_pseudogene KNOWN OTTHUMG00000163620.1 163 163 1 ENSG00000237130.1 MRPS6P2 chr1 50846468 50846837 + processed_pseudogene KNOWN OTTHUMG00000007929.1 370 370 1 ENSG00000254138.1 RP11-152K4.2 chr5 31093977 31267610 - antisense NOVEL OTTHUMG00000163621.1 173634 381 5 ENSG00000113361.11 CDH6 chr5 31193750 31329146 + protein_coding KNOWN OTTHUMG00000090673.2 135397 12379 32 ENSG00000250482.2 RP11-152K4.1 chr5 31249879 31250200 + processed_pseudogene KNOWN OTTHUMG00000161975.2 322 322 1 ENSG00000113360.15 DROSHA chr5 31400497 31532196 - protein_coding KNOWN OTTHUMG00000161976.5 131700 7780 213 ENSG00000206682.1 Y_RNA chr5 31505684 31505788 + misc_RNA NOVEL NA 105 105 1 ENSG00000281600.1 AC106802.1 chr5 31515382 31515525 - miRNA NOVEL NA 144 144 1 ENSG00000082213.16 C5orf22 chr5 31532266 31555058 + protein_coding KNOWN OTTHUMG00000131067.4 22793 4172 54 ENSG00000279923.1 CTD-2008E3.1 chr5 31558573 31559875 + TEC KNOWN OTTHUMG00000175435.1 1303 1303 1 ENSG00000199765.1 RNU6-363P chr5 31595565 31595669 - snRNA KNOWN NA 105 105 1 ENSG00000133401.14 PDZD2 chr5 31639410 32110931 + protein_coding KNOWN OTTHUMG00000161981.4 471522 15642 72 ENSG00000271806.1 RP5-892K4.1 chr1 2141084 2145279 - antisense NOVEL OTTHUMG00000185365.1 4196 4196 1 ENSG00000123080.9 CDKN2C chr1 50960745 50974633 + protein_coding KNOWN OTTHUMG00000008046.2 13889 3318 9 ENSG00000248624.1 RP11-5N11.2 chr5 31657218 31665067 + sense_intronic NOVEL OTTHUMG00000162179.1 7850 543 3 ENSG00000248878.1 RP11-5N11.1 chr5 31725539 31725902 - transcribed_processed_pseudogene KNOWN OTTHUMG00000161972.2 364 364 1 ENSG00000249114.1 RP11-5N11.3 chr5 31738269 31738660 + sense_intronic NOVEL OTTHUMG00000162516.1 392 392 1 ENSG00000248813.1 RP11-5N11.4 chr5 31741833 31742327 - lincRNA NOVEL OTTHUMG00000162515.1 495 495 1 ENSG00000248378.1 RP11-5N11.5 chr5 31743988 31744451 - lincRNA NOVEL OTTHUMG00000162517.1 464 464 1 ENSG00000250164.1 RP11-5N11.6 chr5 31747644 31748078 - lincRNA NOVEL OTTHUMG00000162519.1 435 435 1 ENSG00000249688.1 RP11-5N11.7 chr5 31754219 31754656 + sense_intronic NOVEL OTTHUMG00000162518.1 438 438 1 ENSG00000252373.1 RNU6-358P chr5 31820564 31820638 - snRNA KNOWN NA 75 75 1 ENSG00000224282.3 CTD-2290C23.1 chr5 31822561 31823136 - processed_pseudogene KNOWN OTTHUMG00000157644.1 576 576 1 ENSG00000251887.2 RNU6-760P chr5 31832439 31832535 + snRNA KNOWN NA 97 97 1 ENSG00000265538.1 MIR4421 chr1 51059837 51059905 + miRNA KNOWN NA 69 69 1 ENSG00000241739.1 CTD-2290C23.2 chr5 31840492 31840971 - processed_pseudogene KNOWN OTTHUMG00000157645.1 480 480 1 ENSG00000243914.1 RPL5P14 chr5 31847271 31848148 + processed_pseudogene KNOWN OTTHUMG00000157661.1 878 878 1 ENSG00000265561.1 AC025458.1 chr5 31880035 31880084 - miRNA NOVEL NA 50 50 1 ENSG00000214108.4 TPT1P5 chr5 31908361 31909186 + processed_pseudogene KNOWN OTTHUMG00000160377.1 826 521 2 ENSG00000249774.1 CTD-2206G10.2 chr5 31923367 31923532 + processed_pseudogene KNOWN OTTHUMG00000161995.1 166 166 1 ENSG00000266243.1 MIR4279 chr5 31936102 31936159 - miRNA KNOWN NA 58 58 1 ENSG00000250764.1 CTD-2152M20.2 chr5 32103445 32121941 - antisense NOVEL OTTHUMG00000162178.1 18497 834 5 ENSG00000113384.12 GOLPH3 chr5 32124704 32174350 - protein_coding KNOWN OTTHUMG00000090679.3 49647 2785 11 ENSG00000200065.1 Y_RNA chr5 32134738 32134834 + misc_RNA NOVEL NA 97 97 1 ENSG00000272086.1 CTD-2186M15.3 chr5 32174471 32175272 + lincRNA NOVEL OTTHUMG00000185453.1 802 802 1 ENSG00000275816.1 MIR6500 chr1 51060018 51060103 + miRNA KNOWN NA 86 86 1 ENSG00000230829.3 CTD-2186M15.1 chr5 32221932 32222347 + processed_pseudogene KNOWN OTTHUMG00000157663.1 416 416 1 ENSG00000150712.9 MTMR12 chr5 32226994 32313009 - protein_coding KNOWN OTTHUMG00000161978.1 86016 5545 62 ENSG00000199731.1 RNU6-1079P chr5 32234766 32234875 - snRNA KNOWN NA 110 110 1 ENSG00000207052.1 RNU6-378P chr5 32309662 32309768 + snRNA KNOWN NA 107 107 1 ENSG00000056097.14 ZFR chr5 32354350 32444761 - protein_coding KNOWN OTTHUMG00000161979.1 90412 6792 49 ENSG00000222961.1 AC008949.1 chr5 32379407 32379467 - miRNA NOVEL NA 61 61 1 ENSG00000207956.1 MIR579 chr5 32394378 32394475 - miRNA KNOWN NA 98 98 1 ENSG00000249142.1 CTD-2290P7.1 chr5 32522758 32523865 + processed_pseudogene KNOWN OTTHUMG00000161977.1 1108 1108 1 ENSG00000113387.10 SUB1 chr5 32531633 32604079 + protein_coding KNOWN OTTHUMG00000131071.3 72447 9324 59 ENSG00000250885.1 CTD-2004A9.1 chr5 32646564 32651976 - lincRNA NOVEL OTTHUMG00000162001.1 5413 335 2 ENSG00000204006.7 C1orf185 chr1 51102234 51148086 + protein_coding KNOWN OTTHUMG00000008084.4 45853 1105 18 ENSG00000113389.14 NPR3 chr5 32689070 32791724 + protein_coding KNOWN OTTHUMG00000150316.8 102655 9866 46 ENSG00000272174.1 AC026703.1 chr5 32781538 32781639 + miRNA NOVEL NA 102 102 1 ENSG00000251062.1 CTD-2218G20.1 chr5 32887990 32888145 - processed_pseudogene KNOWN OTTHUMG00000162004.1 156 156 1 ENSG00000250697.1 CTD-2066L21.3 chr5 32925639 33297910 - lincRNA NOVEL OTTHUMG00000162006.1 372272 979 7 ENSG00000248279.4 CTD-2218G20.2 chr5 32947443 32962467 + lincRNA NOVEL OTTHUMG00000162007.1 15025 2008 11 ENSG00000249102.1 CTD-2066L21.1 chr5 33008994 33025724 + lincRNA NOVEL OTTHUMG00000162000.1 16731 599 2 ENSG00000251281.1 CTD-2066L21.2 chr5 33011322 33017607 - lincRNA NOVEL OTTHUMG00000162005.1 6286 425 3 ENSG00000250672.1 CTD-2017D15.1 chr5 33090126 33090349 - processed_pseudogene KNOWN OTTHUMG00000162018.1 224 224 1 ENSG00000240376.1 RP11-36C20.1 chr5 33162179 33162807 + processed_pseudogene KNOWN OTTHUMG00000157664.1 629 629 1 ENSG00000251443.1 RP11-113I22.1 chr5 33229735 33255553 + lincRNA NOVEL OTTHUMG00000162002.1 25819 517 4 ENSG00000200262.1 Y_RNA chr1 51107222 51107331 + misc_RNA NOVEL NA 110 110 1 ENSG00000249572.1 CTD-2203K17.1 chr5 33424025 33440619 - antisense NOVEL OTTHUMG00000162003.1 16595 537 2 ENSG00000113407.12 TARS chr5 33440696 33469539 + protein_coding KNOWN OTTHUMG00000090683.2 28844 5718 155 ENSG00000249360.1 CTD-2233C11.3 chr5 33502072 33503135 + processed_pseudogene KNOWN OTTHUMG00000162159.1 1064 1064 1 ENSG00000250583.1 CTD-2233C11.2 chr5 33519616 33522230 - lincRNA NOVEL OTTHUMG00000162158.1 2615 917 2 ENSG00000151388.9 ADAMTS12 chr5 33523535 33892192 - protein_coding KNOWN OTTHUMG00000162088.4 368658 9778 73 ENSG00000201623.1 RNU6-923P chr5 33888056 33888162 - snRNA KNOWN NA 107 107 1 ENSG00000182631.6 RXFP3 chr5 33936386 33938237 + protein_coding KNOWN OTTHUMG00000090685.1 1852 1852 1 ENSG00000164175.13 SLC45A2 chr5 33944616 33984730 - protein_coding KNOWN OTTHUMG00000090719.4 40115 3267 24 ENSG00000250914.1 RP11-1084J3.1 chr5 33970863 33972628 + processed_pseudogene KNOWN OTTHUMG00000160380.1 1766 1145 2 ENSG00000242110.6 AMACR chr5 33986178 34008108 - protein_coding KNOWN OTTHUMG00000090734.2 21931 4838 44 ENSG00000213478.2 CFL1P2 chr1 51157788 51158471 - processed_pseudogene KNOWN OTTHUMG00000008194.1 684 684 1 ENSG00000273294.1 C1QTNF3-AMACR chr5 33987174 34124528 - protein_coding NOVEL OTTHUMG00000186337.1 137355 3424 9 ENSG00000250767.1 RP11-1084J3.3 chr5 33997044 33997724 - processed_pseudogene KNOWN OTTHUMG00000162528.1 681 681 1 ENSG00000082196.19 C1QTNF3 chr5 34019448 34043832 - protein_coding KNOWN OTTHUMG00000090735.5 24385 3576 24 ENSG00000278900.1 RP11-1250I15.2 chr5 34105750 34106336 - TEC KNOWN OTTHUMG00000162375.1 587 587 1 ENSG00000279995.1 RP11-1250I15.1 chr5 34124162 34124385 - TEC KNOWN OTTHUMG00000162376.1 224 224 1 ENSG00000271771.1 RP11-1250I15.3 chr5 34158121 34158767 + lincRNA NOVEL OTTHUMG00000185454.1 647 647 1 ENSG00000215158.8 RP11-1023L17.1 chr5 34164698 34244796 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000162181.1 80099 6571 19 ENSG00000215156.5 RP11-1023L17.2 chr5 34190056 34193653 + processed_pseudogene KNOWN OTTHUMG00000162182.2 3598 3598 1 ENSG00000249380.1 RP11-1325J9.1 chr5 34373028 34373850 + processed_pseudogene KNOWN OTTHUMG00000161996.1 823 823 1 ENSG00000275218.1 AC114302.1 chr5 34526154 34526301 - miRNA NOVEL NA 148 148 1 ENSG00000239101.1 AL162430.1 chr1 51188463 51188551 + miRNA NOVEL NA 89 89 1 ENSG00000271874.1 CTD-2024P10.2 chr5 34651457 34651888 - lincRNA NOVEL OTTHUMG00000185458.1 432 432 1 ENSG00000039560.12 RAI14 chr5 34656237 34832627 + protein_coding KNOWN OTTHUMG00000162019.2 176391 7687 235 ENSG00000250234.1 CTD-2024P10.1 chr5 34656412 34657250 - antisense NOVEL OTTHUMG00000162022.1 839 407 2 ENSG00000272323.1 CTD-2517O10.6 chr5 34837549 34839278 - antisense NOVEL OTTHUMG00000185459.1 1730 1565 2 ENSG00000205838.11 TTC23L chr5 34838833 34899456 + protein_coding KNOWN OTTHUMG00000162020.1 60624 4289 52 ENSG00000250140.1 CTD-2517O10.5 chr5 34860783 34861506 - processed_pseudogene KNOWN OTTHUMG00000157666.2 724 425 2 ENSG00000241829.1 RPL21P54 chr5 34883057 34883520 + processed_pseudogene KNOWN OTTHUMG00000162023.1 464 464 1 ENSG00000113456.17 RAD1 chr5 34905264 34918989 - protein_coding KNOWN OTTHUMG00000090783.3 13726 6766 38 ENSG00000113460.11 BRIX1 chr5 34915376 34925996 + protein_coding KNOWN OTTHUMG00000162021.2 10621 5011 32 ENSG00000168724.13 DNAJC21 chr5 34929593 34958964 + protein_coding KNOWN OTTHUMG00000074103.2 29372 9137 40 ENSG00000203356.2 LINC01562 chr1 51195095 51235096 - lincRNA NOVEL OTTHUMG00000008195.1 40002 2366 2 ENSG00000113492.12 AGXT2 chr5 34998101 35048135 - protein_coding KNOWN OTTHUMG00000090788.2 50035 3952 53 ENSG00000280468.1 AC010368.1 chr5 35034152 35034242 + miRNA NOVEL NA 91 91 1 ENSG00000113494.15 PRLR chr5 35048756 35230589 - protein_coding KNOWN OTTHUMG00000090789.5 181834 13108 140 ENSG00000250886.1 CTD-2046J7.1 chr5 35081223 35081992 + processed_pseudogene KNOWN OTTHUMG00000159986.2 770 456 2 ENSG00000281247.1 AC027347.1 chr5 35331709 35331831 + miRNA NOVEL NA 123 123 1 ENSG00000201368.2 U3 chr5 35429064 35429277 + snoRNA NOVEL NA 214 214 1 ENSG00000152582.11 SPEF2 chr5 35617844 35814611 + protein_coding KNOWN OTTHUMG00000131111.3 196768 14887 173 ENSG00000238441.1 RNU7-130P chr5 35632963 35633024 - snRNA KNOWN NA 62 62 1 ENSG00000248969.1 CTD-2113L7.1 chr5 35678484 35827018 - antisense NOVEL OTTHUMG00000162095.1 148535 540 4 ENSG00000168685.13 IL7R chr5 35852695 35879603 + protein_coding KNOWN OTTHUMG00000090791.4 26909 6060 41 ENSG00000123091.4 RNF11 chr1 51236271 51273455 + protein_coding KNOWN OTTHUMG00000008190.2 37185 3122 7 ENSG00000279737.1 RP11-79C6.2 chr5 35895689 35896020 - TEC KNOWN OTTHUMG00000162093.1 332 332 1 ENSG00000248349.1 RP11-79C6.1 chr5 35896188 35896290 - processed_pseudogene KNOWN OTTHUMG00000162096.1 103 103 1 ENSG00000152611.10 CAPSL chr5 35904295 35938779 - protein_coding KNOWN OTTHUMG00000131109.3 34485 1135 19 ENSG00000249748.1 RP11-79C6.3 chr5 35938822 35939993 + antisense NOVEL OTTHUMG00000162092.1 1172 374 2 ENSG00000145626.10 UGT3A1 chr5 35951010 36001028 - protein_coding KNOWN OTTHUMG00000131107.5 50019 8485 40 ENSG00000168671.8 UGT3A2 chr5 36035017 36071358 - protein_coding KNOWN OTTHUMG00000131108.2 36342 2694 28 ENSG00000251591.2 CTD-2197M16.1 chr5 36071791 36072079 - processed_pseudogene KNOWN OTTHUMG00000162094.2 289 289 1 ENSG00000164187.6 LMBRD2 chr5 36098412 36151961 - protein_coding KNOWN OTTHUMG00000162150.1 53550 8421 25 ENSG00000207756.1 MIR580 chr5 36147892 36147988 - miRNA KNOWN NA 97 97 1 ENSG00000145604.14 SKP2 chr5 36151989 36184319 + protein_coding KNOWN OTTHUMG00000131106.8 32331 3837 68 ENSG00000233406.5 RP11-296A18.5 chr1 51250603 51251472 - processed_pseudogene KNOWN OTTHUMG00000008196.1 870 870 1 ENSG00000201223.1 RNU6-1305P chr5 36155119 36155222 + snRNA KNOWN NA 104 104 1 ENSG00000152620.11 NADK2 chr5 36192592 36242279 - protein_coding KNOWN OTTHUMG00000131105.4 49688 4885 100 ENSG00000245711.2 NADK2-AS1 chr5 36221055 36221902 + antisense NOVEL OTTHUMG00000162149.1 848 720 2 ENSG00000164188.7 RANBP3L chr5 36248434 36302114 - protein_coding KNOWN OTTHUMG00000131110.2 53681 3363 45 ENSG00000222178.1 RNA5SP181 chr5 36485343 36485440 + rRNA KNOWN NA 98 98 1 ENSG00000242292.2 CTD-2282P23.1 chr5 36588506 36588661 + processed_pseudogene KNOWN OTTHUMG00000157669.2 156 156 1 ENSG00000079215.12 SLC1A3 chr5 36606355 36688334 + protein_coding KNOWN OTTHUMG00000090793.2 81980 6265 72 ENSG00000274441.1 CTD-2282P23.2 chr5 36636019 36649347 - antisense NOVEL OTTHUMG00000188130.1 13329 396 3 ENSG00000250155.1 CTD-2353F22.1 chr5 36666214 36725195 - antisense NOVEL OTTHUMG00000162032.1 58982 1159 9 ENSG00000279400.1 CTD-2353F22.2 chr5 36667717 36669958 + TEC KNOWN OTTHUMG00000188131.1 2242 2242 1 ENSG00000182873.5 RP11-181G12.2 chr1 2181794 2184389 - antisense NOVEL OTTHUMG00000001239.2 2596 1734 5 ENSG00000236434.2 RP11-296A18.6 chr1 51264916 51266074 - antisense NOVEL OTTHUMG00000008188.2 1159 435 2 ENSG00000272103.1 CTD-2653M23.3 chr5 36861736 36862217 - lincRNA NOVEL OTTHUMG00000185469.1 482 482 1 ENSG00000164190.15 NIPBL chr5 36876759 37066413 + protein_coding KNOWN OTTHUMG00000090795.3 189655 12529 124 ENSG00000249850.1 KRT18P31 chr5 36885206 36886497 + processed_pseudogene KNOWN OTTHUMG00000162026.1 1292 1292 1 ENSG00000244073.1 RPS4XP6 chr5 37085056 37085852 + processed_pseudogene KNOWN OTTHUMG00000157671.1 797 797 1 ENSG00000197603.12 C5orf42 chr5 37106228 37249428 - protein_coding KNOWN OTTHUMG00000160492.2 143201 15146 226 ENSG00000271378.1 C8orf59P2 chr5 37130430 37130700 + processed_pseudogene KNOWN OTTHUMG00000184568.1 271 271 1 ENSG00000228212.1 OFD1P17 chr5 37209364 37212381 + processed_pseudogene KNOWN OTTHUMG00000162066.1 3018 3018 1 ENSG00000242493.3 RN7SL37P chr5 37246173 37246479 - misc_RNA KNOWN NA 307 307 1 ENSG00000270558.1 CTD-2124B8.2 chr5 37286449 37286977 - processed_pseudogene KNOWN OTTHUMG00000184305.1 529 529 1 ENSG00000113569.14 NUP155 chr5 37288137 37371181 - protein_coding KNOWN OTTHUMG00000090803.2 83045 9233 130 ENSG00000085831.14 TTC39A chr1 51287258 51345116 - protein_coding KNOWN OTTHUMG00000008193.4 57859 9362 184 ENSG00000251880.1 RNU7-75P chr5 37327135 37327196 + snRNA KNOWN NA 62 62 1 ENSG00000250455.1 RP11-648M2.1 chr5 37377049 37377971 + unprocessed_pseudogene KNOWN OTTHUMG00000162262.1 923 323 2 ENSG00000082068.7 WDR70 chr5 37379212 37753435 + protein_coding KNOWN OTTHUMG00000162263.1 374224 7039 62 ENSG00000248216.1 KCTD9P5 chr5 37505688 37506857 - processed_pseudogene KNOWN OTTHUMG00000162264.1 1170 1170 1 ENSG00000222743.1 RNU6-1190P chr5 37619985 37620088 - snRNA KNOWN NA 104 104 1 ENSG00000206743.1 RNU6-484P chr5 37700331 37700437 - snRNA KNOWN NA 107 107 1 ENSG00000275899.1 AC008869.1 chr5 37795289 37795399 + miRNA NOVEL NA 111 111 1 ENSG00000168621.13 GDNF chr5 37812677 37839686 - protein_coding KNOWN OTTHUMG00000090809.2 27010 4273 23 ENSG00000248587.5 GDNF-AS1 chr5 37840438 37875799 + lincRNA KNOWN OTTHUMG00000162110.2 35362 4636 9 ENSG00000278179.1 AC008869.2 chr5 37888249 37888350 - miRNA NOVEL NA 102 102 1 ENSG00000261664.4 TTC39A-AS1 chr1 51329654 51335324 + antisense NOVEL OTTHUMG00000008189.1 5671 1222 6 ENSG00000248539.1 CTD-2194L12.2 chr5 37899363 37920869 - lincRNA NOVEL OTTHUMG00000162107.1 21507 540 4 ENSG00000250032.1 CTD-2194L12.3 chr5 37939365 37947955 - lincRNA NOVEL OTTHUMG00000162112.1 8591 442 2 ENSG00000251518.1 CTD-2130F23.2 chr5 37948491 37951055 + lincRNA NOVEL OTTHUMG00000162103.1 2565 546 2 ENSG00000248533.1 CTD-2130F23.1 chr5 37953402 37966964 + lincRNA NOVEL OTTHUMG00000162105.1 13563 487 2 ENSG00000250003.2 CTD-2116N24.1 chr5 38025697 38183932 + lincRNA NOVEL OTTHUMG00000162104.2 158236 462 3 ENSG00000238836.1 AC074129.1 chr5 38081672 38081743 - miRNA NOVEL NA 72 72 1 ENSG00000248461.1 CTD-2207A17.1 chr5 38148480 38153715 + lincRNA NOVEL OTTHUMG00000162113.1 5236 2573 2 ENSG00000276332.1 CTD-2007F2.1 chr5 38197432 38198148 + processed_pseudogene KNOWN OTTHUMG00000187574.1 717 717 1 ENSG00000164318.16 EGFLAM chr5 38258409 38465021 + protein_coding KNOWN OTTHUMG00000131139.2 206613 5724 108 ENSG00000248730.1 EGFLAM-AS4 chr5 38282264 38290986 - antisense NOVEL OTTHUMG00000162114.1 8723 1579 4 ENSG00000085832.15 EPS15 chr1 51354263 51519328 - protein_coding KNOWN OTTHUMG00000008192.2 165066 7440 91 ENSG00000249071.2 EGFLAM-AS3 chr5 38345347 38346551 - antisense NOVEL OTTHUMG00000162108.2 1205 549 2 ENSG00000248572.4 EGFLAM-AS2 chr5 38399814 38403413 - antisense NOVEL OTTHUMG00000162115.1 3600 747 6 ENSG00000249491.1 EGFLAM-AS1 chr5 38425036 38427376 - antisense NOVEL OTTHUMG00000162101.1 2341 331 2 ENSG00000248234.1 CTD-2108O9.4 chr5 38429892 38430160 - processed_pseudogene KNOWN OTTHUMG00000162111.1 269 269 1 ENSG00000251257.2 CTD-2263F21.1 chr5 38460925 38468339 - antisense NOVEL OTTHUMG00000162102.2 7415 726 4 ENSG00000113594.8 LIFR chr5 38474963 38608354 - protein_coding KNOWN OTTHUMG00000131138.2 133392 11864 78 ENSG00000244968.5 LIFR-AS1 chr5 38556786 38671216 + antisense NOVEL OTTHUMG00000162109.1 114431 5098 14 ENSG00000265304.1 MIR3650 chr5 38557502 38557561 - miRNA KNOWN NA 60 60 1 ENSG00000251189.1 CTD-2196P11.2 chr5 38682070 38685126 + lincRNA NOVEL OTTHUMG00000162106.1 3057 554 2 ENSG00000249911.1 LINC01265 chr5 38710367 38720273 - lincRNA NOVEL OTTHUMG00000162038.1 9907 800 5 ENSG00000232027.2 RP11-275F13.3 chr1 51372270 51373224 + processed_pseudogene KNOWN OTTHUMG00000008235.2 955 955 1 ENSG00000249740.1 OSMR-AS1 chr5 38736055 38845829 - lincRNA NOVEL OTTHUMG00000162040.1 109775 1319 6 ENSG00000248577.1 RP11-122C5.2 chr5 38763158 38764289 - processed_pseudogene KNOWN OTTHUMG00000162041.1 1132 584 2 ENSG00000250629.1 RP11-122C5.3 chr5 38783580 38792754 + antisense NOVEL OTTHUMG00000162039.1 9175 565 2 ENSG00000145623.11 OSMR chr5 38845858 38945596 + protein_coding KNOWN OTTHUMG00000090811.2 99739 7174 36 ENSG00000164327.11 RICTOR chr5 38937919 39074408 - protein_coding KNOWN OTTHUMG00000162037.1 136490 13550 159 ENSG00000249089.1 AIG1P1 chr5 39022411 39022558 + unprocessed_pseudogene KNOWN OTTHUMG00000162194.1 148 148 1 ENSG00000082074.14 FYB chr5 39105236 39274528 - protein_coding KNOWN OTTHUMG00000162071.4 169293 6100 92 ENSG00000277910.1 AC010633.1 chr5 39141628 39141724 + miRNA NOVEL NA 97 97 1 ENSG00000251215.1 GOLGA5P1 chr5 39169210 39170335 - processed_pseudogene KNOWN OTTHUMG00000162072.1 1126 980 2 ENSG00000113600.9 C9 chr5 39284262 39424868 - protein_coding KNOWN OTTHUMG00000094767.4 140607 2951 27 ENSG00000206595.1 RNU6-877P chr1 51382308 51382414 + snRNA KNOWN NA 107 107 1 ENSG00000153071.13 DAB2 chr5 39371675 39462300 - protein_coding KNOWN OTTHUMG00000162043.3 90626 7717 101 ENSG00000271334.4 CTD-2078B5.2 chr5 39520431 39524708 + lincRNA NOVEL OTTHUMG00000185121.1 4278 599 5 ENSG00000251515.1 CCDC11P1 chr5 39571478 39572639 - processed_pseudogene KNOWN OTTHUMG00000162073.1 1162 1162 1 ENSG00000250492.1 INTS6P1 chr5 39718984 39721513 - processed_pseudogene KNOWN OTTHUMG00000162069.1 2530 2530 1 ENSG00000248651.1 GCSHP1 chr5 39888576 39889059 - processed_pseudogene KNOWN OTTHUMG00000162068.1 484 484 1 ENSG00000250048.1 LINC00603 chr5 40052291 40053324 + lincRNA NOVEL OTTHUMG00000162195.1 1034 562 2 ENSG00000249668.1 KRT18P56 chr5 40066651 40067200 + processed_pseudogene KNOWN OTTHUMG00000162070.2 550 550 1 ENSG00000250585.1 LINC00604 chr5 40260657 40267657 + lincRNA NOVEL OTTHUMG00000162074.1 7001 499 2 ENSG00000199361.1 RNU1-150P chr5 40269558 40269719 + snRNA KNOWN NA 162 162 1 ENSG00000265615.1 AC108105.1 chr5 40320318 40320415 + miRNA NOVEL NA 98 98 1 ENSG00000238140.1 RP11-253A20.1 chr1 51461721 51463416 + antisense NOVEL OTTHUMG00000008236.1 1696 678 2 ENSG00000199552.1 SNORA63 chr5 40654963 40655094 + snoRNA NOVEL NA 132 132 1 ENSG00000171522.5 PTGER4 chr5 40679498 40693735 + protein_coding KNOWN OTTHUMG00000094769.4 14238 3961 12 ENSG00000113638.11 TTC33 chr5 40714475 40755975 - protein_coding KNOWN OTTHUMG00000131142.4 41501 2612 16 ENSG00000132356.10 PRKAA1 chr5 40759379 40798374 - protein_coding KNOWN OTTHUMG00000162269.1 38996 6563 48 ENSG00000212567.1 SNORA57 chr5 40790077 40790204 - snoRNA NOVEL NA 128 128 1 ENSG00000279126.1 AC008810.1 chr5 40801222 40801596 - protein_coding KNOWN NA 375 375 1 ENSG00000145592.12 RPL37 chr5 40825262 40835335 - protein_coding KNOWN OTTHUMG00000094774.5 10074 8153 21 ENSG00000212296.1 SNORD72 chr5 40832656 40832735 - snoRNA KNOWN NA 80 80 1 ENSG00000132357.12 CARD6 chr5 40841184 40860175 + protein_coding KNOWN OTTHUMG00000094775.8 18992 4399 6 ENSG00000112936.17 C7 chr5 40909252 40982939 + protein_coding KNOWN OTTHUMG00000150340.3 73688 5223 35 ENSG00000227070.1 RP11-191G24.1 chr1 51518309 51561629 + antisense NOVEL OTTHUMG00000008232.1 43321 476 5 ENSG00000253098.1 RNU7-161P chr5 40911067 40911128 - snRNA KNOWN NA 62 62 1 ENSG00000248120.1 RP11-301A5.2 chr5 40967505 40967763 - processed_pseudogene KNOWN OTTHUMG00000162268.3 259 259 1 ENSG00000171495.15 MROH2B chr5 40998017 41071342 - protein_coding KNOWN OTTHUMG00000162151.5 73326 6085 160 ENSG00000039537.12 C6 chr5 41142234 41261438 - protein_coding KNOWN OTTHUMG00000094781.4 119205 4739 60 ENSG00000182836.8 PLCXD3 chr5 41306954 41510628 - protein_coding KNOWN OTTHUMG00000162076.1 203675 7731 7 ENSG00000251478.1 CTD-2122P11.1 chr5 41585882 41587787 - processed_pseudogene KNOWN OTTHUMG00000162086.1 1906 1562 2 ENSG00000083720.11 OXCT1 chr5 41730065 41870519 - protein_coding KNOWN OTTHUMG00000094783.3 140455 4194 57 ENSG00000248668.2 OXCT1-AS1 chr5 41870030 41872241 + processed_transcript NOVEL OTTHUMG00000162087.2 2212 2065 5 ENSG00000240281.2 CTD-2062O1.1 chr5 41895068 41895599 + processed_pseudogene KNOWN OTTHUMG00000157674.2 532 532 1 ENSG00000205765.7 C5orf51 chr5 41904188 41921636 + protein_coding KNOWN OTTHUMG00000162084.1 17449 5572 21 ENSG00000252032.1 RNU6-1281P chr1 51538625 51538729 - snRNA KNOWN NA 105 105 1 ENSG00000151876.11 FBXO4 chr5 41925254 41941743 + protein_coding KNOWN OTTHUMG00000094799.3 16490 3014 30 ENSG00000239694.1 CTD-2156G10.1 chr5 41951313 41952193 - processed_pseudogene KNOWN OTTHUMG00000157678.1 881 881 1 ENSG00000199487.1 Y_RNA chr5 41963868 41963969 - misc_RNA NOVEL NA 102 102 1 ENSG00000249266.1 MTHFD2P6 chr5 41967139 41968366 - processed_pseudogene KNOWN OTTHUMG00000162085.2 1228 1022 2 ENSG00000260786.1 RP11-112L7.1 chr5 42188266 42191523 + lincRNA NOVEL OTTHUMG00000173426.1 3258 3258 1 ENSG00000112964.12 GHR chr5 42423777 42721878 + protein_coding KNOWN OTTHUMG00000094791.2 298102 6610 108 ENSG00000248873.1 SERBP1P6 chr5 42465400 42468868 - processed_pseudogene KNOWN OTTHUMG00000162137.1 3469 932 2 ENSG00000250860.1 CTD-2265D6.2 chr5 42466893 42468300 - processed_pseudogene KNOWN OTTHUMG00000162132.1 1408 1408 1 ENSG00000270513.1 RP11-116B13.1 chr5 42729138 42729519 + processed_pseudogene KNOWN OTTHUMG00000184559.1 382 382 1 ENSG00000198865.8 CCDC152 chr5 42756801 42802360 + protein_coding KNOWN OTTHUMG00000162141.1 45560 3431 16 ENSG00000227742.1 CALR4P chr1 51561866 51594897 - unitary_pseudogene KNOWN OTTHUMG00000008233.1 33032 946 7 ENSG00000250722.4 SEPP1 chr5 42799880 42887392 - protein_coding KNOWN OTTHUMG00000162140.3 87513 5688 58 ENSG00000272234.1 CTD-2325A15.5 chr5 42806394 42806997 + antisense NOVEL OTTHUMG00000185470.1 604 604 1 ENSG00000249092.1 CTD-2325A15.3 chr5 42892319 42892817 - processed_pseudogene KNOWN OTTHUMG00000162139.1 499 499 1 ENSG00000251163.1 CTD-2325A15.2 chr5 42897262 42897832 - processed_pseudogene KNOWN OTTHUMG00000162136.2 571 571 1 ENSG00000251656.1 CTD-2201E18.4 chr5 42908208 42908667 - processed_pseudogene KNOWN OTTHUMG00000162138.2 460 460 1 ENSG00000249516.1 CTD-2201E18.2 chr5 42917414 42917984 + processed_pseudogene KNOWN OTTHUMG00000162134.2 571 571 1 ENSG00000250711.1 CTD-2201E18.1 chr5 42972624 42973092 + processed_pseudogene KNOWN OTTHUMG00000162135.2 469 469 1 ENSG00000271788.1 CTD-2201E18.5 chr5 43006733 43007543 - lincRNA NOVEL OTTHUMG00000185475.1 811 811 1 ENSG00000177738.3 CTD-2201E18.3 chr5 43014414 43067419 - sense_overlapping NOVEL OTTHUMG00000162133.2 53006 2784 8 ENSG00000251131.1 CTD-2035E11.3 chr5 43018429 43024247 + antisense NOVEL OTTHUMG00000162236.1 5819 553 6 ENSG00000241860.5 RP11-34P13.13 chr1 141474 173862 - processed_transcript NOVEL OTTHUMG00000002480.3 32389 6195 16 ENSG00000162585.15 C1orf86 chr1 2184461 2212720 - protein_coding KNOWN OTTHUMG00000001404.7 28260 10916 67 ENSG00000117859.17 OSBPL9 chr1 51577179 51798427 + protein_coding KNOWN OTTHUMG00000008234.7 221249 9523 352 ENSG00000272382.1 CTD-2035E11.4 chr5 43033716 43034635 + lincRNA NOVEL OTTHUMG00000185476.1 920 920 1 ENSG00000177721.4 ANXA2R chr5 43039081 43043170 - protein_coding KNOWN OTTHUMG00000162232.1 4090 2386 3 ENSG00000215068.6 AC025171.1 chr5 43041575 43045390 + antisense NOVEL OTTHUMG00000131146.2 3816 2773 12 ENSG00000272144.1 CTD-2035E11.5 chr5 43061395 43062441 + lincRNA NOVEL OTTHUMG00000185477.1 1047 1047 1 ENSG00000172262.10 ZNF131 chr5 43065176 43192021 + protein_coding KNOWN OTTHUMG00000162223.2 126846 8516 98 ENSG00000278487.1 RP11-447H19.4 chr5 43143362 43143514 - processed_pseudogene KNOWN OTTHUMG00000187578.1 153 153 1 ENSG00000177453.6 NIM1K chr5 43192071 43280850 + protein_coding KNOWN OTTHUMG00000131147.2 88780 3619 18 ENSG00000249779.1 RP11-447H19.3 chr5 43206709 43207811 + processed_pseudogene KNOWN OTTHUMG00000162221.1 1103 1103 1 ENSG00000249888.1 RP11-447H19.2 chr5 43225506 43225813 - processed_pseudogene KNOWN OTTHUMG00000162226.1 308 308 1 ENSG00000247763.2 RP11-447H19.1 chr5 43231812 43233173 - processed_pseudogene KNOWN OTTHUMG00000162228.2 1362 1362 1 ENSG00000236973.2 GAPDHP51 chr1 51707138 51708137 - processed_pseudogene KNOWN OTTHUMG00000008961.2 1000 1000 1 ENSG00000261604.1 CTD-2636A23.2 chr5 43287601 43290839 + antisense NOVEL OTTHUMG00000175405.1 3239 2497 3 ENSG00000112972.13 HMGCS1 chr5 43289395 43313512 - protein_coding KNOWN OTTHUMG00000162231.1 24118 4702 32 ENSG00000188850.9 RP11-159F24.2 chr5 43336164 43348716 + transcribed_processed_pseudogene KNOWN OTTHUMG00000162222.1 12553 579 4 ENSG00000151882.10 CCL28 chr5 43376645 43412391 - protein_coding KNOWN OTTHUMG00000094811.3 35747 4524 12 ENSG00000151881.13 C5orf28 chr5 43444252 43483893 - protein_coding KNOWN OTTHUMG00000131150.2 39642 3158 22 ENSG00000249492.1 RP11-159F24.3 chr5 43483959 43509356 + processed_transcript NOVEL OTTHUMG00000162227.2 25398 823 5 ENSG00000172244.7 C5orf34 chr5 43486701 43515145 - protein_coding KNOWN OTTHUMG00000131151.5 28445 3011 28 ENSG00000249855.1 EEF1A1P19 chr5 43495073 43496454 - processed_pseudogene KNOWN OTTHUMG00000162225.1 1382 1382 1 ENSG00000248554.1 RP11-159F24.6 chr5 43511058 43521811 + antisense NOVEL OTTHUMG00000162234.1 10754 572 3 ENSG00000248240.1 RP11-159F24.5 chr5 43515274 43525310 + antisense NOVEL OTTHUMG00000162219.1 10037 512 3 ENSG00000232846.1 SLC25A6P3 chr1 51709062 51709940 + processed_pseudogene KNOWN OTTHUMG00000008962.1 879 879 1 ENSG00000172239.12 PAIP1 chr5 43526267 43557758 - protein_coding KNOWN OTTHUMG00000096960.2 31492 3391 73 ENSG00000248092.6 NNT-AS1 chr5 43571594 43603230 - antisense NOVEL OTTHUMG00000162220.2 31637 6580 16 ENSG00000279557.1 CTD-2210P15.3 chr5 43586367 43587543 - TEC KNOWN OTTHUMG00000185325.1 1177 1177 1 ENSG00000249286.1 CTD-2210P15.2 chr5 43586918 43588223 - processed_pseudogene KNOWN OTTHUMG00000162224.1 1306 994 2 ENSG00000112992.15 NNT chr5 43602692 43707405 + protein_coding KNOWN OTTHUMG00000096961.5 104714 8245 85 ENSG00000224993.3 RPL29P12 chr5 43666766 43667232 - processed_pseudogene KNOWN OTTHUMG00000157679.1 467 467 1 ENSG00000249276.1 RP11-8L21.1 chr5 43874367 43886628 + lincRNA NOVEL OTTHUMG00000162230.1 12262 339 2 ENSG00000212561.1 RNU6-381P chr5 44066624 44066731 - snRNA KNOWN NA 108 108 1 ENSG00000070193.4 FGF10 chr5 44303544 44389706 - protein_coding KNOWN OTTHUMG00000131153.2 86163 3011 5 ENSG00000248464.1 FGF10-AS1 chr5 44388732 44413989 + antisense NOVEL OTTHUMG00000162233.1 25258 1894 3 ENSG00000212624.1 SNORA26 chr1 51724775 51724896 - snoRNA NOVEL NA 122 122 1 ENSG00000249203.1 RP11-473L15.3 chr5 44495618 44510282 - lincRNA NOVEL OTTHUMG00000162229.1 14665 806 6 ENSG00000250418.1 RP11-503D12.1 chr5 44698431 44700808 - lincRNA NOVEL OTTHUMG00000162209.1 2378 449 2 ENSG00000263556.2 RN7SL383P chr5 44716193 44716486 + misc_RNA KNOWN NA 294 294 1 ENSG00000251141.4 RP11-53O19.1 chr5 44744900 44808777 - antisense NOVEL OTTHUMG00000162143.2 63878 2211 27 ENSG00000248779.1 RP11-53O19.2 chr5 44752949 44765744 + lincRNA NOVEL OTTHUMG00000162208.1 12796 591 3 ENSG00000112996.8 MRPS30 chr5 44808925 44820428 + protein_coding KNOWN OTTHUMG00000096967.3 11504 6202 22 ENSG00000272335.1 RP11-53O19.3 chr5 44826076 44828592 + lincRNA NOVEL OTTHUMG00000185479.1 2517 2517 1 ENSG00000280761.1 AC114954.1 chr5 45028496 45028577 - miRNA NOVEL NA 82 82 1 ENSG00000248148.1 RP11-357F12.1 chr5 45035199 45098647 + lincRNA NOVEL OTTHUMG00000162146.1 63449 820 2 ENSG00000164588.4 HCN1 chr5 45259247 45696151 - protein_coding KNOWN OTTHUMG00000131155.1 436905 5405 8 ENSG00000078618.18 NRD1 chr1 51789191 51878937 - protein_coding KNOWN OTTHUMG00000008278.4 89747 6773 237 ENSG00000250422.1 RP11-484L7.1 chr5 45557919 45559986 + processed_pseudogene KNOWN OTTHUMG00000160383.1 2068 2068 1 ENSG00000250017.1 RP11-484L7.2 chr5 45574590 45576612 + processed_pseudogene KNOWN OTTHUMG00000160382.1 2023 2023 1 ENSG00000250122.1 CTD-2013M15.1 chr5 45890216 45895970 + lincRNA NOVEL OTTHUMG00000162210.1 5755 563 2 ENSG00000170571.10 EMB chr5 50396192 50443248 - protein_coding KNOWN OTTHUMG00000131161.2 47057 5257 41 ENSG00000271455.1 RP11-269M20.2 chr5 50603229 50603511 + processed_pseudogene KNOWN OTTHUMG00000184565.1 283 283 1 ENSG00000213956.4 RP11-269M20.1 chr5 50633124 50633602 + processed_pseudogene KNOWN OTTHUMG00000162174.1 479 479 1 ENSG00000271752.1 RP11-269M20.3 chr5 50662859 50663266 - lincRNA NOVEL OTTHUMG00000185342.1 408 408 1 ENSG00000151883.15 PARP8 chr5 50665899 50846522 + protein_coding KNOWN OTTHUMG00000096969.7 180624 10056 297 ENSG00000249405.1 RP11-317O24.1 chr5 50858760 50860020 - lincRNA NOVEL OTTHUMG00000162407.1 1261 794 2 ENSG00000270830.1 RP11-317O24.3 chr5 50903608 50903743 + processed_pseudogene KNOWN OTTHUMG00000184557.1 136 136 1 ENSG00000266993.3 RP4-657D16.3 chr1 51793934 51799154 + antisense NOVEL OTTHUMG00000008380.6 5221 1819 8 ENSG00000251601.1 RP11-317O24.2 chr5 50929484 50934521 - lincRNA NOVEL OTTHUMG00000162405.1 5038 382 3 ENSG00000250360.1 CTD-2089N3.1 chr5 50965687 50967008 - lincRNA NOVEL OTTHUMG00000162402.1 1322 569 2 ENSG00000251573.2 CTD-2089N3.2 chr5 50969217 50970167 - lincRNA NOVEL OTTHUMG00000162408.2 951 606 5 ENSG00000248918.2 CTD-2089N3.3 chr5 50969660 50970187 + lincRNA NOVEL OTTHUMG00000162410.2 528 432 2 ENSG00000207060.1 RNU6-480P chr5 51055353 51055459 - snRNA KNOWN NA 107 107 1 ENSG00000222945.2 AC091866.1 chr5 51061469 51061557 - miRNA NOVEL NA 89 89 1 ENSG00000278734.1 CTD-2054H24.1 chr5 51101172 51101643 - processed_pseudogene KNOWN OTTHUMG00000187582.1 472 472 1 ENSG00000206606.1 RNU6-1296P chr5 51167541 51167647 - snRNA KNOWN NA 107 107 1 ENSG00000240627.1 CTD-2312P21.1 chr5 51275253 51275734 + processed_pseudogene KNOWN OTTHUMG00000157682.1 482 482 1 ENSG00000259663.2 CTD-2314G24.2 chr5 51372736 51383332 - antisense NOVEL OTTHUMG00000171880.2 10597 7152 5 ENSG00000272175.1 RP4-657D16.6 chr1 51801028 51801307 + antisense NOVEL OTTHUMG00000185785.1 280 280 1 ENSG00000016082.13 ISL1 chr5 51383391 51394738 + protein_coding KNOWN OTTHUMG00000162281.9 11348 2882 17 ENSG00000249338.1 HMGB1P47 chr5 51409617 51410205 - processed_pseudogene KNOWN OTTHUMG00000162403.1 589 589 1 ENSG00000248891.2 CTD-2335O3.2 chr5 51427996 51428427 - processed_pseudogene KNOWN OTTHUMG00000162409.2 432 432 1 ENSG00000251125.1 CTD-2335O3.3 chr5 51451158 51462089 + lincRNA NOVEL OTTHUMG00000162404.1 10932 941 3 ENSG00000251873.1 RNA5SP182 chr5 51886688 51886769 + rRNA KNOWN NA 82 82 1 ENSG00000249270.1 KATNBL1P4 chr5 51930808 51932036 + processed_pseudogene KNOWN OTTHUMG00000160384.1 1229 918 2 ENSG00000279470.1 RP11-182I21.2 chr5 51963992 51964445 + TEC KNOWN OTTHUMG00000162169.1 454 454 1 ENSG00000248789.4 CTD-2203A3.1 chr5 52008031 52080987 + lincRNA NOVEL OTTHUMG00000162170.1 72957 759 8 ENSG00000244621.1 RPS17P11 chr5 52282567 52282859 + processed_pseudogene KNOWN OTTHUMG00000157683.1 293 293 1 ENSG00000250827.1 CTD-2141G3.1 chr5 52579555 52581106 - processed_pseudogene KNOWN OTTHUMG00000162166.1 1552 1552 1 ENSG00000212076.1 MIR761 chr1 51836341 51836410 - miRNA KNOWN NA 70 70 1 ENSG00000248898.1 CTD-2288O8.1 chr5 52675193 52788026 - antisense NOVEL OTTHUMG00000162165.1 112834 593 4 ENSG00000213949.7 ITGA1 chr5 52787896 52959210 + protein_coding KNOWN OTTHUMG00000131163.3 171315 18566 71 ENSG00000152684.10 PELO chr5 52787940 52804046 + protein_coding KNOWN OTTHUMG00000096973.2 16107 4349 5 ENSG00000251237.1 B3GNTL1P1 chr5 52889666 52889954 + processed_pseudogene KNOWN OTTHUMG00000162172.1 289 289 1 ENSG00000241809.1 CTD-2207L17.1 chr5 52903908 52904478 + processed_pseudogene KNOWN OTTHUMG00000157684.1 571 571 1 ENSG00000249899.4 CTD-2175A23.1 chr5 52932419 52990278 - antisense NOVEL OTTHUMG00000162173.2 57860 611 10 ENSG00000164171.9 ITGA2 chr5 52989326 53094779 + protein_coding KNOWN OTTHUMG00000131165.4 105454 7910 176 ENSG00000272123.1 CTD-2366F13.2 chr5 53089016 53089468 - antisense NOVEL OTTHUMG00000185483.1 453 453 1 ENSG00000164172.17 MOCS2 chr5 53095679 53110063 - protein_coding KNOWN OTTHUMG00000096981.7 14385 6010 59 ENSG00000247796.2 CTD-2366F13.1 chr5 53109842 53115126 + antisense NOVEL OTTHUMG00000162191.1 5285 3194 7 ENSG00000230604.2 TSEN15P2 chr1 51859778 51860135 + processed_pseudogene KNOWN OTTHUMG00000008626.2 358 358 1 ENSG00000213940.4 RP11-94D20.1 chr5 53206561 53207176 + processed_pseudogene KNOWN OTTHUMG00000157686.2 616 616 1 ENSG00000240052.1 RP11-289K10.1 chr5 53413504 53414260 + processed_pseudogene KNOWN OTTHUMG00000157688.2 757 437 2 ENSG00000134363.10 FST chr5 53480409 53487134 + protein_coding KNOWN OTTHUMG00000131183.4 6726 2969 22 ENSG00000164258.10 NDUFS4 chr5 53560633 53683340 + protein_coding KNOWN OTTHUMG00000096987.3 122708 1176 29 ENSG00000238508.1 AC024569.1 chr5 53609587 53609658 + miRNA NOVEL NA 72 72 1 ENSG00000250447.4 CTD-2081C10.1 chr5 53776644 53819686 - lincRNA NOVEL OTTHUMG00000162282.1 43043 1253 10 ENSG00000217791.4 ASS1P9 chr5 53859166 53860401 + processed_pseudogene KNOWN OTTHUMG00000162285.1 1236 1236 1 ENSG00000272416.1 CTD-2081C10.7 chr5 53880293 53881051 - lincRNA NOVEL OTTHUMG00000185489.1 759 759 1 ENSG00000185305.9 ARL15 chr5 53883945 54310582 - protein_coding KNOWN OTTHUMG00000162287.4 426638 3797 33 ENSG00000222960.1 RNU6-272P chr5 53912020 53912123 - snRNA KNOWN NA 104 104 1 ENSG00000280742.1 AL589663.1 chr1 51900920 51900971 - miRNA NOVEL NA 52 52 1 ENSG00000281639.1 AC024571.1 chr5 53942646 53942746 + miRNA NOVEL NA 101 101 1 ENSG00000207627.1 MIR581 chr5 53951504 53951599 - miRNA KNOWN NA 96 96 1 ENSG00000241230.3 RN7SL801P chr5 54048007 54048308 - misc_RNA KNOWN NA 302 302 1 ENSG00000265421.1 MIR4459 chr5 54075518 54075583 - miRNA KNOWN NA 66 66 1 ENSG00000279638.1 CTD-2081C10.5 chr5 54286194 54286331 - TEC KNOWN OTTHUMG00000162284.1 138 138 1 ENSG00000249069.6 LINC01033 chr5 54320944 54415125 + lincRNA NOVEL OTTHUMG00000162286.3 94182 1261 16 ENSG00000251597.1 RPL37P25 chr5 54399439 54400033 + processed_pseudogene KNOWN OTTHUMG00000162288.1 595 276 2 ENSG00000169271.2 HSPB3 chr5 54455601 54456384 + protein_coding KNOWN OTTHUMG00000096995.2 784 784 1 ENSG00000178996.11 SNX18 chr5 54517759 54546585 + protein_coding KNOWN OTTHUMG00000096994.2 28827 5559 5 ENSG00000280159.1 CTD-2591A1.1 chr5 54643557 54645987 + TEC KNOWN OTTHUMG00000173471.1 2431 2431 1 ENSG00000234396.3 RP11-181G12.4 chr1 2212523 2220738 + lincRNA NOVEL OTTHUMG00000001405.2 8216 326 2 ENSG00000169213.6 RAB3B chr1 51907956 51990764 - protein_coding KNOWN OTTHUMG00000008627.1 82809 12844 5 ENSG00000232517.2 AC112198.1 chr5 54808210 54872551 - unitary_pseudogene KNOWN OTTHUMG00000154831.2 64342 6996 10 ENSG00000221073.1 AC112198.2 chr5 54852846 54852948 - miRNA NOVEL NA 103 103 1 ENSG00000226810.3 RP11-45H22.1 chr5 54857272 54858491 + processed_pseudogene KNOWN OTTHUMG00000162190.1 1220 1220 1 ENSG00000249843.1 RP11-45H22.2 chr5 54878238 54878588 + processed_pseudogene KNOWN OTTHUMG00000162189.1 351 351 1 ENSG00000249016.1 RP11-45H22.3 chr5 54956235 54957846 - lincRNA NOVEL OTTHUMG00000162192.1 1612 441 2 ENSG00000164283.11 ESM1 chr5 54977864 55022671 - protein_coding KNOWN OTTHUMG00000097010.3 44808 2695 10 ENSG00000240535.7 CTD-2313F11.1 chr5 55021299 55042844 - processed_transcript NOVEL OTTHUMG00000162200.4 21546 4140 80 ENSG00000113088.5 GZMK chr5 55024253 55034570 + protein_coding KNOWN OTTHUMG00000097009.2 10318 1570 7 ENSG00000207229.1 Y_RNA chr5 55040847 55040945 + misc_RNA NOVEL NA 99 99 1 ENSG00000251376.1 CTD-2313F11.2 chr5 55054428 55055140 + lincRNA NOVEL OTTHUMG00000162201.1 713 591 2 ENSG00000200839.1 RNA5SP48 chr1 51973410 51973535 + rRNA KNOWN NA 126 126 1 ENSG00000248029.2 CTD-2313F11.3 chr5 55063179 55066230 + lincRNA NOVEL OTTHUMG00000162202.1 3052 567 2 ENSG00000249454.1 GZMAP1 chr5 55073015 55096553 + unprocessed_pseudogene KNOWN OTTHUMG00000162199.1 23539 631 4 ENSG00000145649.7 GZMA chr5 55102648 55110252 + protein_coding KNOWN OTTHUMG00000097011.2 7605 894 5 ENSG00000164287.11 CDC20B chr5 55112995 55173175 - protein_coding KNOWN OTTHUMG00000131185.2 60181 4496 53 ENSG00000164294.12 GPX8 chr5 55160118 55167071 + protein_coding KNOWN OTTHUMG00000162601.2 6954 3868 25 ENSG00000198983.1 MIR449A chr5 55170532 55170622 - miRNA KNOWN NA 91 91 1 ENSG00000207728.1 MIR449B chr5 55170646 55170742 - miRNA KNOWN NA 97 97 1 ENSG00000251856.1 MIR449C chr5 55172262 55172353 - miRNA KNOWN NA 92 92 1 ENSG00000234602.6 MCIDAS chr5 55219614 55227315 - protein_coding KNOWN OTTHUMG00000162600.1 7702 2091 20 ENSG00000152669.8 CCNO chr5 55231152 55233680 - protein_coding KNOWN OTTHUMG00000162598.1 2529 1809 6 ENSG00000229032.1 RP11-91A18.1 chr1 51980473 51980814 + processed_pseudogene KNOWN OTTHUMG00000008628.1 342 342 1 ENSG00000251307.1 RP11-506H20.1 chr5 55233934 55295201 + antisense NOVEL OTTHUMG00000162314.1 61268 770 5 ENSG00000067248.8 DHX29 chr5 55256245 55307722 - protein_coding KNOWN OTTHUMG00000162313.1 51478 4734 92 ENSG00000039123.14 SKIV2L2 chr5 55307760 55425581 + protein_coding KNOWN OTTHUMG00000097019.3 117822 6578 84 ENSG00000271410.1 RP11-506H20.2 chr5 55356308 55357523 - processed_pseudogene KNOWN OTTHUMG00000184306.1 1216 1216 1 ENSG00000280573.1 AC010480.1 chr5 55406321 55406422 + miRNA NOVEL NA 102 102 1 ENSG00000067113.15 PPAP2A chr5 55424854 55535050 - protein_coding KNOWN OTTHUMG00000162240.2 110197 2016 24 ENSG00000279883.1 CTD-2315M5.2 chr5 55484403 55485086 + TEC KNOWN OTTHUMG00000162377.1 684 684 1 ENSG00000265135.1 MIR5687 chr5 55508850 55508926 - miRNA KNOWN NA 77 77 1 ENSG00000250853.1 RNF138P1 chr5 55530156 55530701 - processed_pseudogene KNOWN OTTHUMG00000162239.1 546 546 1 ENSG00000249410.1 AK4P2 chr5 55551885 55552554 - processed_pseudogene KNOWN OTTHUMG00000162238.1 670 670 1 ENSG00000264613.2 RN7SL290P chr1 51995740 51996039 + misc_RNA KNOWN NA 300 300 1 ENSG00000177058.10 SLC38A9 chr5 55625845 55773194 - protein_coding KNOWN OTTHUMG00000131189.9 147350 8823 200 ENSG00000152670.17 DDX4 chr5 55738017 55817157 + protein_coding KNOWN OTTHUMG00000097044.10 79141 3829 177 ENSG00000251368.1 RP11-175M2.1 chr5 55750206 55750401 - processed_pseudogene KNOWN OTTHUMG00000162312.1 196 196 1 ENSG00000199322.1 RNA5SP183 chr5 55777469 55777587 + rRNA KNOWN NA 119 119 1 ENSG00000248854.1 HNRNPH1P3 chr5 55838801 55840025 - processed_pseudogene KNOWN OTTHUMG00000162319.2 1225 1225 1 ENSG00000164509.12 IL31RA chr5 55851379 55922853 + protein_coding KNOWN OTTHUMG00000097045.4 71475 4576 115 ENSG00000279768.1 AC008914.1 chr5 55928640 55928741 - protein_coding KNOWN NA 102 72 2 ENSG00000134352.18 IL6ST chr5 55935095 55994993 - protein_coding KNOWN OTTHUMG00000097043.10 59899 9292 135 ENSG00000262211.1 CTD-2031P19.5 chr5 55936143 55941727 + antisense NOVEL OTTHUMG00000177604.1 5585 797 3 ENSG00000264281.3 CTD-2031P19.4 chr5 55944656 55944733 + processed_pseudogene KNOWN OTTHUMG00000163591.2 78 78 1 ENSG00000117862.10 TXNDC12 chr1 52020131 52056171 - protein_coding KNOWN OTTHUMG00000008629.4 36041 3630 23 ENSG00000227908.3 FLJ31104 chr5 55995167 56003649 + antisense NOVEL OTTHUMG00000162310.2 8483 2289 2 ENSG00000238326.1 snoU13 chr5 56000518 56000621 - snoRNA NOVEL NA 104 104 1 ENSG00000249236.1 CTD-2227I18.1 chr5 56059050 56067372 + lincRNA NOVEL OTTHUMG00000162302.1 8323 384 2 ENSG00000164512.16 ANKRD55 chr5 56099678 56233359 - protein_coding KNOWN OTTHUMG00000162305.6 133682 2979 43 ENSG00000253032.1 RNU6-299P chr5 56125671 56125770 + snRNA KNOWN NA 100 100 1 ENSG00000243592.1 RPL17P22 chr5 56136979 56137531 + processed_pseudogene KNOWN OTTHUMG00000157693.1 553 553 1 ENSG00000223003.1 RNA5SP184 chr5 56146739 56146846 - rRNA KNOWN NA 108 108 1 ENSG00000251435.1 RP11-365H8.2 chr5 56192530 56193633 + processed_pseudogene KNOWN OTTHUMG00000162308.2 1104 1104 1 ENSG00000212265.1 RNA5SP185 chr5 56260333 56260446 - rRNA KNOWN NA 114 114 1 ENSG00000248781.1 PSMC1P4 chr5 56275304 56276630 - processed_pseudogene KNOWN OTTHUMG00000162303.1 1327 1327 1 ENSG00000198841.3 KTI12 chr1 52032103 52033816 - protein_coding KNOWN OTTHUMG00000008630.1 1714 1714 1 ENSG00000210678.1 RNU6ATAC2P chr5 56297564 56297689 - snRNA KNOWN NA 126 126 1 ENSG00000249697.1 RP11-155L15.1 chr5 56313905 56321397 - lincRNA NOVEL OTTHUMG00000162304.1 7493 1227 2 ENSG00000250787.1 HMGN1P17 chr5 56381781 56382075 + processed_pseudogene KNOWN OTTHUMG00000162299.2 295 295 1 ENSG00000265665.1 AC008391.1 chr5 56457038 56457138 - miRNA NOVEL NA 101 101 1 ENSG00000248727.4 CTC-236F12.4 chr5 56457795 56481946 - lincRNA NOVEL OTTHUMG00000162309.3 24152 858 8 ENSG00000226221.1 RPL26P19 chr5 56504635 56505072 - processed_pseudogene KNOWN OTTHUMG00000059487.1 438 438 1 ENSG00000225940.4 AC022431.2 chr5 56511567 56606232 - protein_coding PUTATIVE OTTHUMG00000059482.1 94666 767 10 ENSG00000234553.1 AC022431.3 chr5 56536583 56537826 - sense_intronic NOVEL OTTHUMG00000150054.1 1244 536 2 ENSG00000228650.2 AC008940.1 chr5 56770799 56772303 + lincRNA NOVEL OTTHUMG00000150053.2 1505 785 2 ENSG00000095015.5 MAP3K1 chr5 56815574 56896152 + protein_coding KNOWN OTTHUMG00000059486.2 80579 7716 23 ENSG00000223390.1 RP11-91A18.4 chr1 52033391 52044279 + antisense NOVEL OTTHUMG00000008631.1 10889 762 2 ENSG00000237705.1 AC008937.2 chr5 56842016 56862164 - antisense NOVEL OTTHUMG00000059483.2 20149 619 4 ENSG00000225230.1 AC008937.3 chr5 56900041 56910714 - antisense NOVEL OTTHUMG00000059484.1 10674 914 2 ENSG00000155542.10 SETD9 chr5 56909260 56925532 + protein_coding KNOWN OTTHUMG00000059485.5 16273 2711 44 ENSG00000155545.18 MIER3 chr5 56919602 56971675 - protein_coding KNOWN OTTHUMG00000059589.11 52074 5763 89 ENSG00000271828.1 CTD-2310F14.1 chr5 56927874 56929573 + antisense NOVEL OTTHUMG00000185492.1 1700 1700 1 ENSG00000235635.1 AC016644.1 chr5 56941307 56947152 + antisense NOVEL OTTHUMG00000059593.1 5846 434 2 ENSG00000233943.1 AC114973.1 chr5 56975593 56976224 - processed_pseudogene KNOWN OTTHUMG00000059592.2 632 632 1 ENSG00000248652.2 RP11-101B14.4 chr5 57081745 57081951 - processed_pseudogene KNOWN OTTHUMG00000162326.3 207 207 1 ENSG00000250480.3 RP11-101B14.1 chr5 57120796 57122624 + processed_pseudogene KNOWN OTTHUMG00000160387.5 1829 858 3 ENSG00000207293.1 Y_RNA chr5 57169108 57169209 - misc_RNA NOVEL NA 102 102 1 ENSG00000228369.2 TXNDC12-AS1 chr1 52050918 52052683 + antisense NOVEL OTTHUMG00000008632.2 1766 391 3 ENSG00000062194.14 GPBP1 chr5 57173948 57264679 + protein_coding KNOWN OTTHUMG00000162321.4 90732 6472 73 ENSG00000248586.2 CTD-2516K3.3 chr5 57317989 57320020 - processed_pseudogene KNOWN OTTHUMG00000162329.3 2032 2032 1 ENSG00000250961.1 CTD-2023N9.1 chr5 57395060 57533424 + antisense NOVEL OTTHUMG00000162323.2 138365 897 4 ENSG00000250308.2 SALL4P1 chr5 57422464 57424391 + processed_pseudogene KNOWN OTTHUMG00000162322.2 1928 1860 2 ENSG00000169067.3 ACTBL2 chr5 57480016 57482809 - protein_coding KNOWN OTTHUMG00000162330.1 2794 2794 1 ENSG00000264748.1 AC025470.1 chr5 57481820 57481903 - miRNA NOVEL NA 84 84 1 ENSG00000281462.1 AC008780.1 chr5 57550906 57551033 - miRNA NOVEL NA 128 128 1 ENSG00000248294.1 CTD-2023N9.2 chr5 57574027 57614341 + lincRNA NOVEL OTTHUMG00000162503.1 40315 409 4 ENSG00000249436.1 CTD-2023N9.3 chr5 57614389 57617431 + lincRNA NOVEL OTTHUMG00000162504.1 3043 820 2 ENSG00000249198.1 RP11-772C9.1 chr5 57751192 57751717 - lincRNA NOVEL OTTHUMG00000162327.1 526 526 1 ENSG00000134717.16 BTF3L4 chr1 52056125 52090716 + protein_coding KNOWN OTTHUMG00000008960.2 34592 6022 41 ENSG00000266864.1 AC116606.1 chr5 57872939 57873046 - miRNA NOVEL NA 108 108 1 ENSG00000249584.1 RP11-478P10.1 chr5 57890327 57899162 - lincRNA NOVEL OTTHUMG00000162198.1 8836 4069 3 ENSG00000248132.2 CTD-2037L6.2 chr5 58108082 58122341 - lincRNA NOVEL OTTHUMG00000162196.2 14260 725 5 ENSG00000248271.1 PGAM1P1 chr5 58161197 58161752 + processed_pseudogene KNOWN OTTHUMG00000162197.1 556 556 1 ENSG00000145632.13 PLK2 chr5 58453982 58460260 - protein_coding KNOWN OTTHUMG00000097047.2 6279 4768 73 ENSG00000175857.7 GAPT chr5 58491435 58497090 + protein_coding KNOWN OTTHUMG00000131219.2 5656 3273 18 ENSG00000271257.1 CTD-2117L12.3 chr5 58503295 58503700 + processed_pseudogene KNOWN OTTHUMG00000184556.1 406 406 1 ENSG00000265699.1 MIR548AE2 chr5 58530043 58530109 - miRNA KNOWN NA 67 67 1 ENSG00000250127.1 CTD-2117L12.1 chr5 58541567 58558243 - lincRNA NOVEL OTTHUMG00000162427.1 16677 1184 4 ENSG00000152932.7 RAB3C chr5 58582221 58859394 + protein_coding KNOWN OTTHUMG00000097053.3 277174 9656 15 ENSG00000157077.13 ZFYVE9 chr1 52142094 52346686 + protein_coding KNOWN OTTHUMG00000008061.2 204593 5809 64 ENSG00000248475.4 RP11-479O16.1 chr5 58741581 58817099 - antisense NOVEL OTTHUMG00000162204.1 75519 697 6 ENSG00000240412.1 RPL5P15 chr5 58822503 58823714 + processed_pseudogene KNOWN OTTHUMG00000157698.1 1212 897 2 ENSG00000248733.1 CTD-2176I21.2 chr5 58846885 58863414 - antisense NOVEL OTTHUMG00000162203.1 16530 451 3 ENSG00000113448.15 PDE4D chr5 58969038 60522120 - protein_coding KNOWN OTTHUMG00000162218.6 1553083 15979 228 ENSG00000247345.2 RP11-266N13.2 chr5 59039761 59063503 + antisense NOVEL OTTHUMG00000162414.1 23743 729 2 ENSG00000281006.1 Clostridiales-1 chr5 59200025 59200154 - sRNA NOVEL NA 130 130 1 ENSG00000276214.1 CTD-2146O16.1 chr5 59314110 59314800 + processed_pseudogene KNOWN OTTHUMG00000187583.1 691 691 1 ENSG00000251306.1 NDUFB4P2 chr5 59528861 59529251 + processed_pseudogene KNOWN OTTHUMG00000162215.1 391 391 1 ENSG00000202601.3 MIR582 chr5 59703597 59703708 - miRNA KNOWN NA 112 112 1 ENSG00000248935.1 CTD-2254N19.1 chr5 60021249 60033020 + antisense NOVEL OTTHUMG00000162214.1 11772 717 6 ENSG00000277082.1 AL590822.1 chr1 2222427 2222500 - miRNA NOVEL NA 74 74 1 ENSG00000241745.3 RN7SL788P chr1 52150104 52150419 + misc_RNA KNOWN NA 316 316 1 ENSG00000202017.1 RNU6-806P chr5 60304047 60304151 - snRNA KNOWN NA 105 105 1 ENSG00000213896.4 RP11-546M4.1 chr5 60429903 60430276 - processed_pseudogene KNOWN OTTHUMG00000157700.1 374 374 1 ENSG00000280447.1 FKSG52 chr5 60430738 60431112 + protein_coding KNOWN NA 375 375 1 ENSG00000214244.4 SETP21 chr5 60459848 60460739 - processed_pseudogene KNOWN OTTHUMG00000162435.1 892 892 1 ENSG00000273701.1 PART1_1 chr5 60487713 60487929 + misc_RNA NOVEL NA 217 217 1 ENSG00000152931.7 PART1 chr5 60487713 60547657 + lincRNA KNOWN OTTHUMG00000162213.3 59945 9752 8 ENSG00000275634.1 PART1_2 chr5 60488078 60488327 + misc_RNA NOVEL NA 250 250 1 ENSG00000276233.1 PART1_3 chr5 60546219 60546349 + misc_RNA NOVEL NA 131 131 1 ENSG00000035499.11 DEPDC1B chr5 60596912 60700190 - protein_coding KNOWN OTTHUMG00000097083.3 103279 3806 40 ENSG00000251303.1 CTD-2003D5.1 chr5 60630514 60630973 + processed_pseudogene KNOWN OTTHUMG00000162415.1 460 460 1 ENSG00000281172.1 AL139156.1 chr1 52150329 52150412 + miRNA NOVEL NA 84 84 1 ENSG00000250148.1 KRT8P31 chr5 60743563 60744970 - processed_pseudogene KNOWN OTTHUMG00000162434.1 1408 1408 1 ENSG00000164181.12 ELOVL7 chr5 60751791 60844389 - protein_coding KNOWN OTTHUMG00000162254.1 92599 4576 58 ENSG00000272308.1 RP11-231G3.1 chr5 60866457 60866935 - lincRNA NOVEL OTTHUMG00000185498.1 479 479 1 ENSG00000049167.12 ERCC8 chr5 60873831 60945073 - protein_coding KNOWN OTTHUMG00000097741.2 71243 4847 65 ENSG00000215032.2 GNL3LP1 chr5 60891935 60893577 - processed_pseudogene KNOWN OTTHUMG00000153832.1 1643 1643 1 ENSG00000233847.1 AC104113.3 chr5 60917490 60919573 + antisense NOVEL OTTHUMG00000153833.1 2084 408 3 ENSG00000164182.9 NDUFAF2 chr5 60945129 61153037 + protein_coding KNOWN OTTHUMG00000131221.3 207909 1017 15 ENSG00000279985.1 CTC-436P18.4 chr5 61114432 61116753 - TEC KNOWN OTTHUMG00000187224.1 2322 2322 1 ENSG00000276945.1 CTC-436P18.5 chr5 61145846 61146376 - unprocessed_pseudogene KNOWN OTTHUMG00000187584.1 531 531 1 ENSG00000188725.6 SMIM15 chr5 61157709 61162474 - protein_coding KNOWN OTTHUMG00000162241.1 4766 2889 7 ENSG00000228407.2 RP4-800M22.1 chr1 52160261 52160600 - processed_pseudogene KNOWN OTTHUMG00000008063.2 340 340 1 ENSG00000251279.1 CTC-436P18.1 chr5 61162070 61232040 + antisense NOVEL OTTHUMG00000162242.1 69971 796 4 ENSG00000249279.4 CTC-436P18.3 chr5 61201309 61264929 - lincRNA NOVEL OTTHUMG00000162244.1 63621 1036 5 ENSG00000130449.5 ZSWIM6 chr5 61332273 61546170 + protein_coding KNOWN OTTHUMG00000162388.1 213898 5501 14 ENSG00000251682.1 RP11-631M6.3 chr5 61347126 61347716 + processed_pseudogene KNOWN OTTHUMG00000162250.1 591 591 1 ENSG00000277348.1 AC122718.1 chr5 61356436 61356545 + miRNA NOVEL NA 110 110 1 ENSG00000250461.1 RP11-631M6.2 chr5 61375112 61375855 + processed_pseudogene KNOWN OTTHUMG00000162243.1 744 744 1 ENSG00000213891.3 RPL3P6 chr5 61390668 61391871 - processed_pseudogene KNOWN OTTHUMG00000157703.1 1204 1204 1 ENSG00000223200.1 AC008836.1 chr5 61557283 61557367 + miRNA NOVEL NA 85 85 1 ENSG00000178722.11 C5orf64 chr5 61637708 61751763 + processed_transcript KNOWN OTTHUMG00000162412.1 114056 4043 19 ENSG00000248529.4 RP11-2O17.2 chr5 61658474 61698432 - antisense NOVEL OTTHUMG00000162438.1 39959 3473 16 ENSG00000223429.1 RP4-800M22.2 chr1 52162186 52163026 - processed_pseudogene KNOWN OTTHUMG00000008064.1 841 841 1 ENSG00000212215.1 RNU6-913P chr5 61664145 61664239 - snRNA KNOWN NA 95 95 1 ENSG00000251575.2 CTD-2170G1.2 chr5 61732774 61735669 - lincRNA NOVEL OTTHUMG00000162439.2 2896 1505 4 ENSG00000249878.1 CTD-2244C20.1 chr5 61831947 61833024 - processed_pseudogene KNOWN OTTHUMG00000162295.1 1078 1078 1 ENSG00000248199.1 CTD-2244C20.2 chr5 61878109 61886129 + lincRNA NOVEL OTTHUMG00000162296.1 8021 454 2 ENSG00000251983.1 RN7SKP157 chr5 62146665 62146946 + misc_RNA KNOWN NA 282 282 1 ENSG00000068796.15 KIF2A chr5 62306162 62537249 + protein_coding KNOWN OTTHUMG00000097755.5 231088 4774 113 ENSG00000086189.8 DIMT1 chr5 62387254 62403939 - protein_coding KNOWN OTTHUMG00000131223.2 16686 3736 44 ENSG00000086200.15 IPO11 chr5 62403972 62628582 + protein_coding KNOWN OTTHUMG00000154400.4 224611 7540 131 ENSG00000199279.1 RNU6-661P chr5 62443176 62443282 + snRNA KNOWN NA 107 107 1 ENSG00000268942.2 CKS1BP3 chr5 62512246 62512482 - processed_pseudogene KNOWN OTTHUMG00000187230.1 237 237 1 ENSG00000224255.2 PDCL3P6 chr1 52179848 52180553 + processed_pseudogene KNOWN OTTHUMG00000008058.2 706 706 1 ENSG00000241991.1 RP11-95I19.2 chr5 62561859 62562216 - processed_pseudogene KNOWN OTTHUMG00000157708.1 358 358 1 ENSG00000240436.1 RP11-95I19.1 chr5 62575951 62576271 - processed_pseudogene KNOWN OTTHUMG00000157707.1 321 321 1 ENSG00000186105.7 LRRC70 chr5 62578735 62581448 + protein_coding KNOWN OTTHUMG00000154401.4 2714 2249 8 ENSG00000217416.4 ISCA1P1 chr5 62776877 62777263 - processed_pseudogene KNOWN OTTHUMG00000153236.1 387 387 1 ENSG00000249579.2 RP11-586E1.1 chr5 63022919 63023489 - processed_pseudogene KNOWN OTTHUMG00000162265.2 571 571 1 ENSG00000248185.1 CTD-2049O17.1 chr5 63301523 63302056 + processed_pseudogene KNOWN OTTHUMG00000162266.1 534 300 2 ENSG00000248285.1 RP11-158J3.2 chr5 63957893 63981043 - sense_overlapping NOVEL OTTHUMG00000162289.1 23151 219 2 ENSG00000178394.4 HTR1A chr5 63960356 63962507 - protein_coding KNOWN OTTHUMG00000162279.1 2152 1819 3 ENSG00000164197.10 RNF180 chr5 64165844 64372869 + protein_coding KNOWN OTTHUMG00000162278.1 207026 5434 17 ENSG00000236068.2 AC016561.1 chr5 64404512 64486615 - unitary_pseudogene KNOWN OTTHUMG00000154702.2 82104 1100 5 ENSG00000236004.2 RP4-800M22.4 chr1 52189916 52190309 - processed_pseudogene KNOWN OTTHUMG00000008059.2 394 394 1 ENSG00000186479.4 RGS7BP chr5 64506257 64612312 + protein_coding KNOWN OTTHUMG00000162293.1 106056 4379 13 ENSG00000242547.3 RN7SL169P chr5 64539504 64539792 + misc_RNA KNOWN NA 289 289 1 ENSG00000201869.1 RNU6-294P chr5 64573569 64573670 + snRNA KNOWN NA 102 102 1 ENSG00000224296.3 MRPL49P1 chr5 64674853 64675387 + processed_pseudogene KNOWN OTTHUMG00000162389.1 535 535 1 ENSG00000145642.10 FAM159B chr5 64690308 64718090 + protein_coding KNOWN OTTHUMG00000162292.2 27783 1348 17 ENSG00000153006.13 SREK1IP1 chr5 64718144 64768685 - protein_coding KNOWN OTTHUMG00000162291.5 50542 7537 24 ENSG00000153015.14 CWC27 chr5 64768930 65018763 + protein_coding KNOWN OTTHUMG00000074069.7 249834 3740 40 ENSG00000281653.1 AC109465.1 chr5 64839096 64839195 + miRNA NOVEL NA 100 100 1 ENSG00000272370.1 RP11-307L14.1 chr5 65020038 65020551 + lincRNA NOVEL OTTHUMG00000185501.1 514 514 1 ENSG00000272354.1 RP11-307L14.2 chr5 65020614 65020989 + lincRNA NOVEL OTTHUMG00000185502.1 376 376 1 ENSG00000237663.2 DNAJC19P7 chr1 52252062 52252773 - processed_pseudogene KNOWN OTTHUMG00000008060.2 712 344 2 ENSG00000207439.1 Y_RNA chr5 65123369 65123474 + misc_RNA NOVEL NA 106 106 1 ENSG00000049192.13 ADAMTS6 chr5 65148736 65481920 - protein_coding KNOWN OTTHUMG00000074079.7 333185 8567 107 ENSG00000248288.1 CTD-2194F4.2 chr5 65209921 65210948 + processed_pseudogene KNOWN OTTHUMG00000162553.1 1028 737 2 ENSG00000250732.1 RPEP1 chr5 65251127 65251784 - processed_pseudogene KNOWN OTTHUMG00000162552.1 658 658 1 ENSG00000205644.5 CTD-2375G15.1 chr5 65415353 65416222 + processed_pseudogene KNOWN OTTHUMG00000157734.1 870 870 1 ENSG00000250081.1 CTD-2116N20.1 chr5 65486444 65487048 - lincRNA NOVEL OTTHUMG00000162551.1 605 365 2 ENSG00000123219.11 CENPK chr5 65517766 65563171 - protein_coding KNOWN OTTHUMG00000131227.4 45406 4312 121 ENSG00000113593.10 PPWD1 chr5 65563236 65587549 + protein_coding KNOWN OTTHUMG00000131226.4 24314 3777 96 ENSG00000113595.13 TRIM23 chr5 65589680 65625975 - protein_coding KNOWN OTTHUMG00000097802.3 36296 4807 53 ENSG00000207352.1 RNU6-540P chr5 65604661 65604761 - snRNA KNOWN NA 101 101 1 ENSG00000213735.2 ANAPC10P1 chr1 52253621 52254176 + processed_pseudogene KNOWN OTTHUMG00000008062.1 556 556 1 ENSG00000113597.16 TRAPPC13 chr5 65624716 65666233 + protein_coding KNOWN OTTHUMG00000163649.1 41518 7049 94 ENSG00000253251.2 CTC-534A2.2 chr5 65624765 65630891 + protein_coding KNOWN OTTHUMG00000162694.4 6127 1964 4 ENSG00000197860.8 SGTB chr5 65665928 65723035 - protein_coding KNOWN OTTHUMG00000097801.2 57108 5748 18 ENSG00000123213.21 NLN chr5 65722196 65871725 + protein_coding KNOWN OTTHUMG00000097803.5 149530 10948 72 ENSG00000251648.2 CTD-2353N24.1 chr5 65732973 65733654 + processed_pseudogene KNOWN OTTHUMG00000162730.2 682 682 1 ENSG00000269961.1 CTD-2033C11.1 chr5 65924629 65925135 - lincRNA NOVEL OTTHUMG00000184016.1 507 507 1 ENSG00000112851.13 ERBB2IP chr5 65926475 66082549 + protein_coding KNOWN OTTHUMG00000097808.2 156075 10216 215 ENSG00000252904.1 SNORA76 chr5 65961183 65961319 - snoRNA NOVEL NA 137 137 1 ENSG00000153914.14 SREK1 chr5 66139971 66183615 + protein_coding KNOWN OTTHUMG00000097809.3 43645 18240 108 ENSG00000253744.1 AC025442.3 chr5 66144156 66144795 - antisense NOVEL OTTHUMG00000164088.1 640 481 2 ENSG00000154222.13 CC2D1B chr1 52345723 52366193 - protein_coding KNOWN OTTHUMG00000008102.5 20471 7495 150 ENSG00000248846.2 CTD-2016O11.1 chr5 66206212 66209447 - lincRNA NOVEL OTTHUMG00000164089.1 3236 562 2 ENSG00000251391.4 RP11-305P14.1 chr5 66298468 66322944 + lincRNA NOVEL OTTHUMG00000164090.1 24477 445 4 ENSG00000250313.2 RP11-5P22.3 chr5 66507544 66511604 - lincRNA NOVEL OTTHUMG00000162359.2 4061 661 3 ENSG00000234838.3 RP11-5P22.1 chr5 66572057 66572546 + processed_pseudogene KNOWN OTTHUMG00000162362.2 490 490 1 ENSG00000069020.17 MAST4 chr5 66596361 67169595 + protein_coding KNOWN OTTHUMG00000152471.5 573235 14675 197 ENSG00000248803.1 RP11-287J9.1 chr5 66622868 66623177 + processed_pseudogene KNOWN OTTHUMG00000162360.2 310 310 1 ENSG00000249057.1 MAST4-IT1 chr5 66662331 66662988 + sense_intronic NOVEL OTTHUMG00000162486.1 658 658 1 ENSG00000229666.1 MAST4-AS1 chr5 67001383 67003953 - antisense NOVEL OTTHUMG00000152480.1 2571 777 2 ENSG00000134061.5 CD180 chr5 67179613 67196799 - protein_coding KNOWN OTTHUMG00000131229.3 17187 5668 5 ENSG00000251206.1 CTD-2187J20.1 chr5 67268022 67270182 + lincRNA NOVEL OTTHUMG00000162351.1 2161 509 3 ENSG00000272100.1 RP11-155O18.6 chr1 52353487 52353877 + antisense NOVEL OTTHUMG00000185808.1 391 391 1 ENSG00000249364.4 RP11-434D9.1 chr5 67379378 67805238 + lincRNA NOVEL OTTHUMG00000162352.1 425861 3250 19 ENSG00000250978.4 RP11-357D18.1 chr5 67463809 67475592 - processed_transcript NOVEL OTTHUMG00000162358.1 11784 837 9 ENSG00000222939.1 AC079467.1 chr5 67464522 67464608 - miRNA NOVEL NA 87 87 1 ENSG00000239870.1 RP11-83M16.1 chr5 67608654 67609130 + processed_pseudogene KNOWN OTTHUMG00000157735.1 477 477 1 ENSG00000249736.1 RP11-83M16.5 chr5 67632266 67646789 - lincRNA NOVEL OTTHUMG00000162355.1 14524 641 3 ENSG00000249238.1 BCL9P1 chr5 67636382 67638942 + processed_pseudogene KNOWN OTTHUMG00000162353.1 2561 2561 1 ENSG00000250669.1 RP11-83M16.3 chr5 67690033 67690437 - processed_pseudogene KNOWN OTTHUMG00000162356.1 405 405 1 ENSG00000249721.1 RP11-83M16.4 chr5 67692812 67693200 - processed_pseudogene KNOWN OTTHUMG00000162357.1 389 389 1 ENSG00000250421.4 RP11-83M16.6 chr5 67699429 67902600 - lincRNA NOVEL OTTHUMG00000162350.1 203172 737 8 ENSG00000249894.1 RP11-434D9.2 chr5 67800740 67890096 - lincRNA NOVEL OTTHUMG00000162354.1 89357 566 3 ENSG00000157933.9 SKI chr1 2228695 2310119 + protein_coding KNOWN OTTHUMG00000001407.3 81425 6080 14 ENSG00000224680.4 PLA2G12AP1 chr1 52368677 52369244 + processed_pseudogene KNOWN OTTHUMG00000008103.2 568 568 1 ENSG00000273860.1 CTD-3066C23.1 chr5 67855735 67855986 + processed_pseudogene KNOWN OTTHUMG00000187587.1 252 252 1 ENSG00000223149.1 AC010376.1 chr5 67967445 67967551 + miRNA NOVEL NA 107 107 1 ENSG00000253801.2 CTD-2060F24.1 chr5 68087161 68087494 - processed_pseudogene KNOWN OTTHUMG00000164189.2 334 334 1 ENSG00000252108.1 RNU6-1232P chr5 68159061 68159146 - snRNA KNOWN NA 86 86 1 ENSG00000213864.3 EEF1B2P2 chr5 68159218 68159893 - processed_pseudogene KNOWN OTTHUMG00000164190.1 676 676 1 ENSG00000253787.1 RP11-404L6.2 chr5 68189876 68198407 + lincRNA NOVEL OTTHUMG00000164191.1 8532 454 3 ENSG00000145675.13 PIK3R1 chr5 68215720 68301821 + protein_coding KNOWN OTTHUMG00000131251.2 86102 10767 115 ENSG00000251044.2 CTD-2582M21.1 chr5 68374765 68375292 + lincRNA NOVEL OTTHUMG00000162485.2 528 371 2 ENSG00000248884.1 CTC-537E7.3 chr5 68430427 68434481 - lincRNA NOVEL OTTHUMG00000162337.1 4055 410 3 ENSG00000249588.1 CTC-537E7.1 chr5 68523878 68530007 + lincRNA NOVEL OTTHUMG00000162331.1 6130 587 2 ENSG00000085840.11 ORC1 chr1 52372829 52404459 - protein_coding KNOWN OTTHUMG00000008104.4 31631 3157 34 ENSG00000248359.1 CTC-537E7.2 chr5 68531690 68533530 - lincRNA NOVEL OTTHUMG00000162335.1 1841 340 2 ENSG00000249335.1 CTC-340D7.1 chr5 68832585 68962158 - lincRNA NOVEL OTTHUMG00000162332.1 129574 499 3 ENSG00000250289.1 VWA8P1 chr5 68854910 68855085 - processed_pseudogene KNOWN OTTHUMG00000162334.2 176 176 1 ENSG00000212249.2 U8 chr5 68873954 68874087 + snoRNA NOVEL NA 134 134 1 ENSG00000278251.1 AC093523.1 chr5 68890139 68890224 - miRNA NOVEL NA 86 86 1 ENSG00000250066.1 RP11-141O11.1 chr5 68963246 68967845 + lincRNA NOVEL OTTHUMG00000162333.1 4600 417 2 ENSG00000276309.1 7SK chr5 68970439 68970752 - misc_RNA NOVEL NA 314 314 1 ENSG00000249352.4 RP11-141O11.2 chr5 68970692 69030165 - lincRNA NOVEL OTTHUMG00000162336.3 59474 1196 5 ENSG00000250237.1 CTC-498J12.1 chr5 69038518 69043821 - lincRNA NOVEL OTTHUMG00000162382.1 5304 438 2 ENSG00000249183.1 SUMO2P4 chr5 69068925 69069200 - processed_pseudogene KNOWN OTTHUMG00000162383.1 276 276 1 ENSG00000134748.12 PRPF38A chr1 52404564 52420839 + protein_coding KNOWN OTTHUMG00000008199.2 16276 5658 21 ENSG00000145740.17 SLC30A5 chr5 69093646 69131069 + protein_coding KNOWN OTTHUMG00000131253.4 37424 5784 62 ENSG00000248664.1 CTC-498J12.3 chr5 69113112 69136394 - antisense NOVEL OTTHUMG00000162416.2 23283 946 6 ENSG00000220986.1 SNORA50 chr5 69160806 69160939 + snoRNA NOVEL NA 134 134 1 ENSG00000280894.1 SNORA76 chr5 69160808 69160939 + snoRNA NOVEL NA 132 132 1 ENSG00000134057.13 CCNB1 chr5 69167010 69178245 + protein_coding KNOWN OTTHUMG00000097817.3 11236 2558 42 ENSG00000280187.1 CTC-351M12.1 chr5 69186359 69189452 - TEC KNOWN OTTHUMG00000163000.1 3094 3094 1 ENSG00000153044.8 CENPH chr5 69189548 69210357 + protein_coding KNOWN OTTHUMG00000097816.2 20810 2244 38 ENSG00000134056.10 MRPS36 chr5 69217760 69230129 + protein_coding KNOWN OTTHUMG00000162443.2 12370 1530 18 ENSG00000134058.9 CDK7 chr5 69234795 69277430 + protein_coding KNOWN OTTHUMG00000099358.6 42636 2419 121 ENSG00000183323.11 CCDC125 chr5 69280175 69332809 - protein_coding KNOWN OTTHUMG00000131259.6 52635 7932 58 ENSG00000134744.12 ZCCHC11 chr1 52408282 52553487 - protein_coding KNOWN OTTHUMG00000008200.4 145206 16199 192 ENSG00000213830.3 CFL1P5 chr5 69313371 69313872 - processed_pseudogene KNOWN OTTHUMG00000162502.2 502 502 1 ENSG00000215006.4 CHCHD2P2 chr5 69333929 69334249 + processed_pseudogene KNOWN OTTHUMG00000162501.1 321 321 1 ENSG00000271045.1 RP11-1113N2.4 chr5 69349936 69350445 + processed_pseudogene KNOWN OTTHUMG00000184558.1 510 510 1 ENSG00000085231.12 TAF9 chr5 69350984 69370013 - protein_coding KNOWN OTTHUMG00000187252.2 19030 2162 21 ENSG00000273841.3 TAF9 chr5 69364743 69370013 - protein_coding KNOWN OTTHUMG00000099359.5 5271 2577 23 ENSG00000152942.17 RAD17 chr5 69369293 69414801 + protein_coding KNOWN OTTHUMG00000099357.10 45509 4159 238 ENSG00000152939.13 MARVELD2 chr5 69415112 69444330 + protein_coding KNOWN OTTHUMG00000162512.2 29219 4898 36 ENSG00000244717.1 RPS27P14 chr5 69469883 69470136 + processed_pseudogene KNOWN OTTHUMG00000157737.1 254 254 1 ENSG00000249295.1 RP11-241G9.3 chr5 69477472 69502466 - antisense NOVEL OTTHUMG00000162564.1 24995 427 4 ENSG00000266477.2 RN7SL616P chr5 69478997 69479265 - misc_RNA KNOWN NA 269 269 1 ENSG00000272371.1 RP11-25O10.2 chr1 52554818 52555273 + lincRNA NOVEL OTTHUMG00000185810.1 456 456 1 ENSG00000197822.9 OCLN chr5 69492292 69558104 + protein_coding KNOWN OTTHUMG00000099356.2 65813 6761 34 ENSG00000212260.1 RNU6-724P chr5 69530613 69530717 - snRNA KNOWN NA 105 105 1 ENSG00000183474.14 GTF2H2C chr5 69560208 69594723 + protein_coding KNOWN OTTHUMG00000162365.5 34516 6989 128 ENSG00000248477.5 RP11-848G14.2 chr5 69607099 69624049 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000162451.4 16951 1073 9 ENSG00000250138.4 RP11-848G14.5 chr5 69631963 69636399 + unprocessed_pseudogene KNOWN OTTHUMG00000162367.3 4437 4437 1 ENSG00000253203.5 GUSBP3 chr5 69639459 69679259 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000162368.5 39801 1296 8 ENSG00000248769.1 RP11-974F13.5 chr5 69653248 69654334 + unprocessed_pseudogene KNOWN OTTHUMG00000162418.2 1087 1087 1 ENSG00000198237.8 RP11-98J23.2 chr5 69875271 69920867 + unprocessed_pseudogene KNOWN OTTHUMG00000164581.1 45597 633 5 ENSG00000251158.1 RP11-98J23.1 chr5 69898867 69903198 - unprocessed_pseudogene KNOWN OTTHUMG00000162369.2 4332 4332 1 ENSG00000249230.1 CDH12P2 chr5 69985204 69985501 - unprocessed_pseudogene KNOWN OTTHUMG00000162392.3 298 298 1 ENSG00000236290.1 EEF1GP7 chr1 52573114 52573816 + processed_pseudogene KNOWN OTTHUMG00000008321.1 703 703 1 ENSG00000205572.8 SERF1B chr5 70025247 70043113 + protein_coding KNOWN OTTHUMG00000162391.3 17867 3051 24 ENSG00000205571.11 SMN2 chr5 70049612 70078522 + protein_coding KNOWN OTTHUMG00000099389.7 28911 2999 94 ENSG00000179978.11 RP11-1319K7.1 chr5 70094659 70128434 - unprocessed_pseudogene KNOWN OTTHUMG00000162450.4 33776 3544 12 ENSG00000253492.1 CDH12P3 chr5 70132679 70132973 + unprocessed_pseudogene KNOWN OTTHUMG00000162449.3 295 295 1 ENSG00000254701.3 RP11-1415C14.4 chr5 70197255 70207745 - unprocessed_pseudogene KNOWN OTTHUMG00000162444.4 10491 584 4 ENSG00000253816.3 RP11-1415C14.3 chr5 70219918 70258930 - unprocessed_pseudogene KNOWN OTTHUMG00000162755.2 39013 497 4 ENSG00000226259.9 GTF2H2B chr5 70415352 70448015 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000162394.8 32664 3979 46 ENSG00000269983.1 RP11-497H16.9 chr5 70449636 70450353 + lincRNA NOVEL OTTHUMG00000184032.1 718 718 1 ENSG00000250687.5 RP11-497H16.7 chr5 70462244 70479215 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000162475.2 16972 1104 15 ENSG00000253333.1 RP11-497H16.8 chr5 70495100 70500903 - unprocessed_pseudogene KNOWN OTTHUMG00000162474.2 5804 371 3 ENSG00000116157.5 GPX7 chr1 52602372 52609051 + protein_coding KNOWN OTTHUMG00000008322.1 6680 1691 5 ENSG00000196302.5 RP11-497H16.5 chr5 70516387 70555266 - unprocessed_pseudogene KNOWN OTTHUMG00000162445.2 38880 418 4 ENSG00000253366.3 RP11-589F5.4 chr5 70751184 70795914 + unprocessed_pseudogene KNOWN OTTHUMG00000162420.3 44731 640 5 ENSG00000254335.1 CDH12P1 chr5 70860285 70860579 - unprocessed_pseudogene KNOWN OTTHUMG00000164541.1 295 295 1 ENSG00000172058.14 SERF1A chr5 70900665 70918530 + protein_coding KNOWN OTTHUMG00000162419.5 17866 3285 27 ENSG00000172062.15 SMN1 chr5 70925030 70953942 + protein_coding KNOWN OTTHUMG00000099361.6 28913 3097 72 ENSG00000249437.6 NAIP chr5 70968483 71025114 - protein_coding KNOWN OTTHUMG00000163318.6 56632 9513 99 ENSG00000145736.13 GTF2H2 chr5 71032670 71067689 - protein_coding KNOWN OTTHUMG00000164542.3 35020 8676 119 ENSG00000230847.4 RP11-195E2.1 chr5 71074225 71093193 - unprocessed_pseudogene KNOWN OTTHUMG00000162521.3 18969 679 5 ENSG00000251634.2 RP11-1280N14.3 chr5 71102898 71128753 - unprocessed_pseudogene KNOWN OTTHUMG00000099405.6 25856 2851 9 ENSG00000253900.1 CDH12P4 chr5 71132993 71133287 + unprocessed_pseudogene KNOWN OTTHUMG00000164582.1 295 295 1 ENSG00000182183.13 FAM159A chr1 52633344 52669683 + protein_coding KNOWN OTTHUMG00000008330.2 36340 2508 17 ENSG00000215630.6 GUSBP9 chr5 71197646 71208130 - unprocessed_pseudogene KNOWN OTTHUMG00000164583.1 10485 584 4 ENSG00000235558.3 RP11-1198D22.1 chr5 71220356 71259238 - unprocessed_pseudogene KNOWN OTTHUMG00000164585.1 38883 423 4 ENSG00000250387.2 RP11-136K7.2 chr5 71351855 71446342 - lincRNA NOVEL OTTHUMG00000163654.1 94488 2767 5 ENSG00000253985.1 RP11-136K7.3 chr5 71372676 71374898 - lincRNA NOVEL OTTHUMG00000163798.1 2223 501 3 ENSG00000169040.13 PMCHL2 chr5 71375786 71385993 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000099413.5 10208 2854 12 ENSG00000265132.1 AC145141.2 chr5 71387276 71387363 - miRNA NOVEL NA 88 88 1 ENSG00000249981.1 RP11-136K7.1 chr5 71445616 71446569 + lincRNA NOVEL OTTHUMG00000163315.1 954 567 2 ENSG00000145734.17 BDP1 chr5 71455615 71567820 + protein_coding KNOWN OTTHUMG00000162506.22 112206 12436 125 ENSG00000253536.1 RP11-1174L13.2 chr5 71475761 71476316 - processed_pseudogene KNOWN OTTHUMG00000163655.1 556 556 1 ENSG00000247911.3 HMGN1P12 chr5 71537652 71537846 - processed_pseudogene KNOWN OTTHUMG00000163799.1 195 195 1 ENSG00000162377.5 COA7 chr1 52684451 52698366 - protein_coding KNOWN OTTHUMG00000008505.3 13916 4165 6 ENSG00000131844.14 MCCC2 chr5 71587288 71658704 + protein_coding KNOWN OTTHUMG00000162505.9 71417 6034 87 ENSG00000280673.1 AC143336.1 chr5 71614984 71615084 - miRNA NOVEL NA 101 101 1 ENSG00000164326.4 CARTPT chr5 71719163 71721048 + protein_coding KNOWN OTTHUMG00000131261.3 1886 1216 5 ENSG00000278824.1 RP11-1315F8.2 chr5 71754378 71756301 - processed_pseudogene KNOWN OTTHUMG00000187590.1 1924 836 2 ENSG00000281845.1 AC138942.1 chr5 71831315 71831410 - miRNA NOVEL NA 96 96 1 ENSG00000131711.13 MAP1B chr5 72107234 72209570 + protein_coding KNOWN OTTHUMG00000100952.11 102337 12630 29 ENSG00000264099.1 MIR4803 chr5 72169467 72169540 + miRNA KNOWN NA 74 74 1 ENSG00000113048.15 MRPS27 chr5 72219409 72320646 - protein_coding KNOWN OTTHUMG00000100951.8 101238 6511 101 ENSG00000244748.3 RN7SL153P chr5 72314397 72314688 - misc_RNA KNOWN NA 292 292 1 ENSG00000049883.13 PTCD2 chr5 72320367 72368395 + protein_coding KNOWN OTTHUMG00000100953.10 48029 12115 100 ENSG00000233664.1 NDUFS5P3 chr1 52709122 52709442 + processed_pseudogene KNOWN OTTHUMG00000008506.1 321 321 1 ENSG00000244061.1 RP11-389C8.1 chr5 72381794 72382393 + processed_pseudogene KNOWN OTTHUMG00000157738.1 600 600 1 ENSG00000251108.1 YBX1P5 chr5 72417489 72418335 + processed_pseudogene KNOWN OTTHUMG00000163415.1 847 847 1 ENSG00000261269.1 RP11-389C8.2 chr5 72439903 72442387 - sense_overlapping NOVEL OTTHUMG00000173465.1 2485 2485 1 ENSG00000178175.10 ZNF366 chr5 72442652 72507727 - protein_coding KNOWN OTTHUMG00000100965.3 65076 3975 13 ENSG00000248371.4 CTC-347C20.2 chr5 72574120 72660669 - lincRNA NOVEL OTTHUMG00000163319.1 86550 818 8 ENSG00000251613.3 CTC-347C20.1 chr5 72687112 72762727 - lincRNA NOVEL OTTHUMG00000163316.4 75616 1081 8 ENSG00000226544.4 RPL7P22 chr5 72725419 72726151 + processed_pseudogene KNOWN OTTHUMG00000157744.3 733 733 1 ENSG00000223497.1 AC063979.1 chr5 72733833 72734209 + unitary_pseudogene KNOWN OTTHUMG00000154742.1 377 377 1 ENSG00000206770.1 Y_RNA chr5 72768702 72768811 + misc_RNA NOVEL NA 110 110 1 ENSG00000249085.1 CTD-2631K10.1 chr5 72794405 72816565 - antisense NOVEL OTTHUMG00000162494.1 22161 493 2 ENSG00000116151.12 MORN1 chr1 2321253 2391707 - protein_coding KNOWN OTTHUMG00000001402.6 70455 11337 67 ENSG00000239640.3 RN7SL62P chr1 52714399 52714695 + misc_RNA KNOWN NA 297 297 1 ENSG00000083312.16 TNPO1 chr5 72816312 72916733 + protein_coding KNOWN OTTHUMG00000100967.7 100422 11977 132 ENSG00000263593.1 MIR4804 chr5 72878591 72878663 + miRNA KNOWN NA 73 73 1 ENSG00000242602.1 CTD-2339M3.1 chr5 72878868 72879185 - processed_pseudogene KNOWN OTTHUMG00000157746.1 318 318 1 ENSG00000271926.1 CTD-2376I4.1 chr5 72953635 72954274 - lincRNA NOVEL OTTHUMG00000185522.1 640 640 1 ENSG00000272081.1 CTD-2376I4.2 chr5 72955206 72955699 - lincRNA NOVEL OTTHUMG00000185523.1 494 494 1 ENSG00000157107.12 FCHO2 chr5 72955981 73090522 + protein_coding KNOWN OTTHUMG00000162413.6 134542 6127 78 ENSG00000251467.1 CTC-250P20.2 chr5 72996920 72997642 + processed_pseudogene KNOWN OTTHUMG00000162496.1 723 723 1 ENSG00000248930.1 CTC-250P20.1 chr5 73020700 73021279 - processed_pseudogene KNOWN OTTHUMG00000162437.1 580 580 1 ENSG00000200833.2 Y_RNA chr5 73100073 73100183 + misc_RNA NOVEL NA 111 111 1 ENSG00000157111.11 TMEM171 chr5 73120292 73131817 + protein_coding KNOWN OTTHUMG00000131269.3 11526 1535 8 ENSG00000162378.11 ZYG11B chr1 52726467 52827342 + protein_coding KNOWN OTTHUMG00000008938.1 100876 8198 28 ENSG00000251599.1 RP11-232L2.2 chr5 73132008 73150592 - antisense NOVEL OTTHUMG00000162500.1 18585 449 2 ENSG00000250747.1 RP11-232L2.1 chr5 73152416 73152938 - processed_pseudogene KNOWN OTTHUMG00000162493.1 523 523 1 ENSG00000238738.1 AC116345.1 chr5 73154111 73154184 - miRNA NOVEL NA 74 74 1 ENSG00000164325.7 TMEM174 chr5 73173195 73175143 + protein_coding KNOWN OTTHUMG00000131268.2 1949 1759 4 ENSG00000249743.4 RP11-60A8.1 chr5 73213947 73294934 + lincRNA NOVEL OTTHUMG00000162463.3 80988 1494 16 ENSG00000251543.1 RP11-60A8.2 chr5 73337906 73338533 + lincRNA NOVEL OTTHUMG00000162497.1 628 301 2 ENSG00000249149.2 RP11-79P5.3 chr5 73382384 73410509 + transcribed_processed_pseudogene KNOWN OTTHUMG00000162498.3 28126 881 4 ENSG00000251493.3 FOXD1 chr5 73444827 73448362 - protein_coding KNOWN OTTHUMG00000162495.3 3536 2458 3 ENSG00000247993.2 FOXD1-AS1 chr5 73446357 73446984 + lincRNA NOVEL OTTHUMG00000160932.1 628 424 2 ENSG00000251604.1 LINC01385 chr5 73451498 73453395 + lincRNA NOVEL OTTHUMG00000162491.1 1898 780 2 ENSG00000252018.1 RNU2-30P chr1 52754322 52754462 + snRNA KNOWN NA 141 141 1 ENSG00000251324.1 LINC01386 chr5 73454187 73472896 - antisense NOVEL OTTHUMG00000162499.1 18710 440 5 ENSG00000272525.1 RP11-79P5.9 chr5 73497550 73498293 - lincRNA NOVEL OTTHUMG00000185524.1 744 744 1 ENSG00000145741.14 BTF3 chr5 73498408 73505635 + protein_coding KNOWN OTTHUMG00000102031.6 7228 2467 39 ENSG00000255883.1 RP11-79P5.10 chr5 73508685 73509254 + processed_pseudogene KNOWN OTTHUMG00000186591.1 570 570 1 ENSG00000164331.8 ANKRA2 chr5 73552335 73565686 - protein_coding KNOWN OTTHUMG00000102030.2 13352 2659 32 ENSG00000164338.8 UTP15 chr5 73565443 73583377 + protein_coding KNOWN OTTHUMG00000162453.1 17935 6321 61 ENSG00000214944.8 ARHGEF28 chr5 73626158 73941993 + protein_coding KNOWN OTTHUMG00000162454.2 315836 15617 248 ENSG00000249293.1 CTC-575I10.1 chr5 73778039 73786491 - antisense NOVEL OTTHUMG00000162452.1 8453 556 3 ENSG00000184084.7 CTD-2372A4.1 chr5 73803296 73803599 - processed_pseudogene KNOWN OTTHUMG00000162455.1 304 304 1 ENSG00000238913.1 RNU7-196P chr5 73828012 73828073 - snRNA KNOWN NA 62 62 1 ENSG00000228929.1 RPS13P2 chr1 52772194 52772648 - processed_pseudogene KNOWN OTTHUMG00000008921.1 455 455 1 ENSG00000259968.3 RP11-428C6.2 chr5 73952940 73954014 + lincRNA NOVEL OTTHUMG00000173474.1 1075 1075 1 ENSG00000248474.1 CTD-2292M14.1 chr5 74084068 74103216 - lincRNA NOVEL OTTHUMG00000162456.1 19149 577 2 ENSG00000248942.1 LINC01335 chr5 74306410 74308325 - lincRNA NOVEL OTTHUMG00000162459.1 1916 389 3 ENSG00000244326.3 RN7SL814P chr5 74317986 74318285 + misc_RNA KNOWN NA 300 300 1 ENSG00000251041.1 CTD-2275D24.1 chr5 74321631 74340152 + lincRNA NOVEL OTTHUMG00000162457.1 18522 550 3 ENSG00000249343.1 LINC01333 chr5 74322486 74328297 + lincRNA NOVEL OTTHUMG00000162460.1 5812 724 3 ENSG00000250446.1 LINC01332 chr5 74327995 74334766 - lincRNA NOVEL OTTHUMG00000162458.1 6772 502 2 ENSG00000248673.1 LINC01331 chr5 74369376 74536976 - lincRNA NOVEL OTTHUMG00000162462.1 167601 568 3 ENSG00000171617.12 ENC1 chr5 74627406 74641424 - protein_coding KNOWN OTTHUMG00000102059.5 14019 5858 22 ENSG00000049860.12 HEXB chr5 74640023 74722647 + protein_coding KNOWN OTTHUMG00000102057.12 82625 5067 76 ENSG00000206627.1 RNU6-969P chr1 52805108 52805212 - snRNA KNOWN NA 105 105 1 ENSG00000164347.16 GFM2 chr5 74721204 74767371 - protein_coding KNOWN OTTHUMG00000102058.4 46168 4197 110 ENSG00000207336.1 RNU6-658P chr5 74725099 74725204 - snRNA KNOWN NA 106 106 1 ENSG00000164346.8 NSA2 chr5 74766991 74780113 + protein_coding KNOWN OTTHUMG00000131273.6 13123 4962 22 ENSG00000198780.10 FAM169A chr5 74777574 74866951 - protein_coding KNOWN OTTHUMG00000162930.4 89378 6860 65 ENSG00000199645.1 RNU6-1330P chr5 74779309 74779413 + snRNA KNOWN NA 105 105 1 ENSG00000250071.1 CTD-2060C23.1 chr5 74798994 74800100 + processed_pseudogene KNOWN OTTHUMG00000162509.1 1107 1107 1 ENSG00000271714.1 CTD-2377O17.1 chr5 74865893 74867854 + antisense NOVEL OTTHUMG00000185527.1 1962 1962 1 ENSG00000212363.1 SNORA40 chr5 74882656 74882783 - snoRNA NOVEL NA 128 128 1 ENSG00000249856.1 CTD-2503O16.4 chr5 74917726 75023928 - lincRNA NOVEL OTTHUMG00000162890.2 106203 846 5 ENSG00000196390.6 CTD-2503O16.3 chr5 74929880 74930566 + processed_pseudogene KNOWN OTTHUMG00000162889.1 687 687 1 ENSG00000203995.8 ZYG11A chr1 52842511 52894998 + protein_coding KNOWN OTTHUMG00000008923.4 52488 4694 41 ENSG00000239517.1 CTD-2503O16.1 chr5 74931662 74931817 + processed_pseudogene KNOWN OTTHUMG00000157747.1 156 156 1 ENSG00000182383.8 RPL27AP5 chr5 74990189 74990637 - processed_pseudogene KNOWN OTTHUMG00000157749.1 449 449 1 ENSG00000249157.1 RP11-229C3.4 chr5 75006713 75007012 - processed_pseudogene KNOWN OTTHUMG00000162650.1 300 300 1 ENSG00000176928.5 GCNT4 chr5 75025346 75030899 - protein_coding KNOWN OTTHUMG00000131272.1 5554 5554 1 ENSG00000250889.2 LINC01336 chr5 75047719 75052843 - lincRNA NOVEL OTTHUMG00000162467.2 5125 793 5 ENSG00000145700.8 ANKRD31 chr5 75068275 75236878 - protein_coding KNOWN OTTHUMG00000162649.3 168604 6273 65 ENSG00000251663.1 SUMO2P5 chr5 75225424 75225668 + processed_pseudogene KNOWN OTTHUMG00000162466.2 245 245 1 ENSG00000247372.2 CTD-2235C13.2 chr5 75320155 75336914 - antisense NOVEL OTTHUMG00000162465.1 16760 527 3 ENSG00000113161.14 HMGCR chr5 75336329 75362104 + protein_coding KNOWN OTTHUMG00000102069.3 25776 6215 88 ENSG00000271815.1 CTD-2235C13.3 chr5 75363760 75364242 + lincRNA NOVEL OTTHUMG00000185529.1 483 483 1 ENSG00000242391.2 RP4-631H13.2 chr1 52881216 52881730 - antisense NOVEL OTTHUMG00000008926.2 515 380 2 ENSG00000113163.14 COL4A3BP chr5 75368486 75512138 - protein_coding KNOWN OTTHUMG00000102068.4 143653 8697 71 ENSG00000242198.1 CTD-2235C13.1 chr5 75374463 75374809 + processed_pseudogene KNOWN OTTHUMG00000157751.1 347 347 1 ENSG00000122008.14 POLK chr5 75511756 75601144 + protein_coding KNOWN OTTHUMG00000102107.5 89389 9105 171 ENSG00000251724.1 RNU7-175P chr5 75538598 75538658 - snRNA KNOWN NA 61 61 1 ENSG00000248881.1 CTC-366B18.2 chr5 75598482 75599380 - antisense NOVEL OTTHUMG00000162488.1 899 754 2 ENSG00000272040.1 CTC-366B18.4 chr5 75608817 75609983 + lincRNA NOVEL OTTHUMG00000185530.1 1167 1167 1 ENSG00000189045.12 ANKDD1B chr5 75611459 75671846 + protein_coding KNOWN OTTHUMG00000162490.4 60388 3287 31 ENSG00000152359.13 POC5 chr5 75674124 75717481 - protein_coding KNOWN OTTHUMG00000162487.4 43358 3448 88 ENSG00000207333.1 RNU6-680P chr5 75709495 75709599 - snRNA KNOWN NA 105 105 1 ENSG00000251078.1 SLC25A5P9 chr5 75752570 75753479 - processed_pseudogene KNOWN OTTHUMG00000162489.1 910 910 1 ENSG00000121310.15 ECHDC2 chr1 52895910 52927212 - protein_coding KNOWN OTTHUMG00000008927.9 31303 11572 148 ENSG00000251419.1 RP11-524L6.4 chr5 75831255 75832764 - processed_pseudogene KNOWN OTTHUMG00000162659.1 1510 1510 1 ENSG00000249301.1 RP11-524L6.3 chr5 75910283 75910576 - processed_pseudogene KNOWN OTTHUMG00000162661.1 294 294 1 ENSG00000248684.1 BIN2P2 chr5 75910565 75911867 + processed_pseudogene KNOWN OTTHUMG00000162507.1 1303 1303 1 ENSG00000228367.3 RP11-524L6.2 chr5 75920670 75921660 - processed_pseudogene KNOWN OTTHUMG00000162508.1 991 991 1 ENSG00000249777.1 CTC-235G5.1 chr5 76075531 76075920 + processed_pseudogene KNOWN OTTHUMG00000162385.1 390 390 1 ENSG00000251342.1 CTC-235G5.2 chr5 76078666 76079763 + processed_pseudogene KNOWN OTTHUMG00000162386.1 1098 1098 1 ENSG00000248127.1 CTC-235G5.3 chr5 76081946 76084186 - lincRNA NOVEL OTTHUMG00000162399.1 2241 691 2 ENSG00000122012.12 SV2C chr5 76083172 76353939 + protein_coding KNOWN OTTHUMG00000162384.5 270768 12028 28 ENSG00000252833.1 RNA5SP186 chr5 76091708 76091801 - rRNA KNOWN NA 94 94 1 ENSG00000251668.1 RP11-466P24.5 chr5 76170930 76171103 + processed_pseudogene KNOWN OTTHUMG00000162397.1 174 174 1 ENSG00000230953.2 RP4-631H13.6 chr1 52920422 52920596 + processed_pseudogene KNOWN OTTHUMG00000057523.2 175 175 1 ENSG00000254893.4 RP11-466P24.2 chr5 76173632 76174183 - processed_pseudogene KNOWN OTTHUMG00000162396.1 552 552 1 ENSG00000249014.2 HMGN2P4 chr5 76242024 76242404 - processed_pseudogene KNOWN OTTHUMG00000162400.2 381 381 1 ENSG00000251107.1 PDCD5P2 chr5 76280956 76281267 + processed_pseudogene KNOWN OTTHUMG00000162398.1 312 312 1 ENSG00000250348.1 RP11-466P24.6 chr5 76285542 76311462 - antisense NOVEL OTTHUMG00000162401.1 25921 756 3 ENSG00000251235.3 SNRPCP2 chr5 76376675 76377149 + processed_pseudogene KNOWN OTTHUMG00000162431.1 475 475 1 ENSG00000145703.14 IQGAP2 chr5 76403249 76708132 + protein_coding KNOWN OTTHUMG00000162432.1 304884 7904 235 ENSG00000250574.1 CTD-2275D10.2 chr5 76510440 76510766 + processed_pseudogene KNOWN OTTHUMG00000162433.1 327 327 1 ENSG00000249713.1 CTD-2236F14.1 chr5 76606608 76608970 - antisense NOVEL OTTHUMG00000162430.1 2363 1588 2 ENSG00000164220.6 F2RL2 chr5 76615482 76623434 - protein_coding KNOWN OTTHUMG00000102119.3 7953 3429 4 ENSG00000225407.3 CTD-2384B11.2 chr5 76691439 76716215 - antisense NOVEL OTTHUMG00000162429.1 24777 600 4 ENSG00000231866.2 RP4-631H13.4 chr1 52925249 52925423 - processed_pseudogene KNOWN OTTHUMG00000008929.2 175 175 1 ENSG00000277188.1 NCRUPAR_1 chr5 76712195 76712327 + misc_RNA NOVEL NA 133 133 1 ENSG00000278237.1 NCRUPAR_2 chr5 76712763 76712861 + misc_RNA NOVEL NA 99 99 1 ENSG00000181104.6 F2R chr5 76716043 76735781 + protein_coding KNOWN OTTHUMG00000131299.2 19739 4066 4 ENSG00000164251.4 F2RL1 chr5 76818933 76835315 + protein_coding KNOWN OTTHUMG00000102118.2 16383 2958 4 ENSG00000264391.2 RN7SL208P chr5 76836900 76837195 - misc_RNA KNOWN NA 296 296 1 ENSG00000171643.12 S100Z chr5 76850001 76921650 + protein_coding KNOWN OTTHUMG00000162441.1 71650 1954 12 ENSG00000252684.1 RNU6ATAC36P chr5 76948791 76948870 + snRNA KNOWN NA 80 80 1 ENSG00000145708.9 CRHBP chr5 76952713 76981158 + protein_coding KNOWN OTTHUMG00000102133.2 28446 2803 22 ENSG00000164252.11 AGGF1 chr5 77029251 77065234 + protein_coding KNOWN OTTHUMG00000102132.2 35984 5051 26 ENSG00000132846.5 ZBED3 chr5 77072072 77087323 - protein_coding KNOWN OTTHUMG00000102131.3 15252 6514 7 ENSG00000272161.1 RP4-713A8.1 chr1 2326201 2326693 - sense_intronic NOVEL OTTHUMG00000185693.1 493 493 1 ENSG00000116171.15 SCP2 chr1 52927229 53051703 + protein_coding KNOWN OTTHUMG00000008936.4 124475 8305 139 ENSG00000250615.1 CTC-564N23.2 chr5 77073881 77074520 + antisense NOVEL OTTHUMG00000162471.2 640 385 2 ENSG00000238961.1 SNORA47 chr5 77080434 77080571 - snoRNA KNOWN NA 138 138 1 ENSG00000250802.5 ZBED3-AS1 chr5 77086740 77166909 + antisense NOVEL OTTHUMG00000162473.3 80170 6183 71 ENSG00000222316.1 AC008581.1 chr5 77137967 77138076 + miRNA NOVEL NA 110 110 1 ENSG00000251566.1 HMGB1P35 chr5 77146568 77147165 + processed_pseudogene KNOWN OTTHUMG00000162472.1 598 598 1 ENSG00000113231.12 PDE8B chr5 77210449 77429807 + protein_coding KNOWN OTTHUMG00000102170.10 219359 6944 132 ENSG00000251400.1 ALDH7A1P1 chr5 77290268 77291800 + processed_pseudogene KNOWN OTTHUMG00000162511.1 1533 1533 1 ENSG00000164253.11 WDR41 chr5 77425970 77620611 - protein_coding KNOWN OTTHUMG00000102169.12 194642 7230 196 ENSG00000244019.1 RPS2P24 chr5 77545397 77546266 + processed_pseudogene KNOWN OTTHUMG00000157756.2 870 870 1 ENSG00000244363.3 RPL7P23 chr5 77582376 77583122 + processed_pseudogene KNOWN OTTHUMG00000157760.1 747 747 1 ENSG00000264834.1 MIR1273F chr1 52928674 52928772 + miRNA KNOWN NA 99 99 1 ENSG00000171540.7 OTP chr5 77628712 77639688 - protein_coding KNOWN OTTHUMG00000102171.5 10977 4451 5 ENSG00000171530.12 TBCA chr5 77691166 77868780 - protein_coding KNOWN OTTHUMG00000102173.7 177615 3058 31 ENSG00000213763.4 ACTBP2 chr5 77784881 77786003 + processed_pseudogene KNOWN OTTHUMG00000162641.1 1123 1123 1 ENSG00000253572.2 RP11-107N7.1 chr5 77942757 77946438 - lincRNA NOVEL OTTHUMG00000163634.2 3682 722 2 ENSG00000132842.12 AP3B1 chr5 78000525 78294755 - protein_coding KNOWN OTTHUMG00000106919.2 294231 7310 79 ENSG00000253558.1 CTD-2179L22.1 chr5 78041879 78044138 - transcribed_processed_pseudogene KNOWN OTTHUMG00000162654.1 2260 2260 1 ENSG00000222085.1 AC024568.1 chr5 78056624 78056746 - miRNA NOVEL NA 123 123 1 ENSG00000249372.1 ATP6V1G1P6 chr5 78222184 78222517 + processed_pseudogene KNOWN OTTHUMG00000162480.1 334 334 1 ENSG00000251605.1 CTD-2037K23.1 chr5 78307503 78307914 + processed_pseudogene KNOWN OTTHUMG00000162482.1 412 412 1 ENSG00000200331.1 RNU6-183P chr5 78314916 78315025 - snRNA KNOWN NA 110 110 1 ENSG00000266188.1 MIR5095 chr1 52934930 52935017 + miRNA KNOWN NA 88 88 1 ENSG00000206714.1 Y_RNA chr5 78317036 78317137 + misc_RNA NOVEL NA 102 102 1 ENSG00000245556.2 SCAMP1-AS1 chr5 78342365 78360507 - lincRNA NOVEL OTTHUMG00000162481.1 18143 1792 5 ENSG00000085365.16 SCAMP1 chr5 78360583 78479071 + protein_coding KNOWN OTTHUMG00000162479.5 118489 5106 42 ENSG00000145685.12 LHFPL2 chr5 78485215 78770021 - protein_coding KNOWN OTTHUMG00000107579.4 284807 7977 27 ENSG00000248909.1 HMGB1P21 chr5 78644265 78644845 - processed_pseudogene KNOWN OTTHUMG00000162478.1 581 581 1 ENSG00000254170.1 CTD-2073O6.1 chr5 78708734 78716082 - processed_pseudogene KNOWN OTTHUMG00000162797.1 7349 791 3 ENSG00000254310.1 CTD-2045M21.1 chr5 78753596 78753873 + processed_pseudogene KNOWN OTTHUMG00000162828.1 278 278 1 ENSG00000113273.14 ARSB chr5 78777209 78986087 - protein_coding KNOWN OTTHUMG00000108129.3 208879 7189 31 ENSG00000132837.13 DMGDH chr5 78997606 79236038 - protein_coding KNOWN OTTHUMG00000108159.4 238433 5254 73 ENSG00000214890.3 CTD-2299I21.1 chr5 79000112 79001124 - processed_pseudogene KNOWN OTTHUMG00000162842.1 1013 1013 1 ENSG00000265815.1 MIR1273G chr1 52940314 52940413 + miRNA KNOWN NA 100 100 1 ENSG00000132840.8 BHMT2 chr5 79069717 79089466 + protein_coding KNOWN OTTHUMG00000108158.3 19750 3182 35 ENSG00000145692.13 BHMT chr5 79111779 79132290 + protein_coding KNOWN OTTHUMG00000108157.4 20512 3519 24 ENSG00000201955.1 RNY3P1 chr5 79170234 79170335 - misc_RNA KNOWN NA 102 102 1 ENSG00000249829.2 CTC-422A18.1 chr5 79191549 79191747 + processed_pseudogene KNOWN OTTHUMG00000162789.2 199 199 1 ENSG00000206592.1 SNORA18 chr5 79220942 79221073 + snoRNA NOVEL NA 132 132 1 ENSG00000250330.1 CTC-422A18.2 chr5 79229904 79230588 + processed_pseudogene KNOWN OTTHUMG00000162790.1 685 359 2 ENSG00000152409.8 JMY chr5 79236189 79327215 + protein_coding KNOWN OTTHUMG00000131301.6 91027 9042 13 ENSG00000213757.3 CTC-451P13.1 chr5 79284132 79284918 - processed_pseudogene KNOWN OTTHUMG00000157775.1 787 787 1 ENSG00000152413.13 HOMER1 chr5 79372636 79514217 - protein_coding KNOWN OTTHUMG00000134278.2 141582 6154 29 ENSG00000213755.3 RP11-342F17.1 chr5 79510434 79510919 + processed_pseudogene KNOWN OTTHUMG00000157777.1 486 486 1 ENSG00000237279.2 RP4-631H13.5 chr1 52943536 52943930 - processed_pseudogene KNOWN OTTHUMG00000008931.2 395 395 1 ENSG00000243160.1 RP11-342F17.2 chr5 79529302 79530093 + processed_pseudogene KNOWN OTTHUMG00000157778.1 792 792 1 ENSG00000275447.1 AC093270.1 chr5 79532251 79532362 + miRNA NOVEL NA 112 112 1 ENSG00000207391.1 Y_RNA chr5 79534853 79534954 + misc_RNA NOVEL NA 102 102 1 ENSG00000277818.1 Y_RNA chr5 79562745 79562846 - misc_RNA NOVEL NA 102 102 1 ENSG00000164329.12 PAPD4 chr5 79612120 79686648 + protein_coding KNOWN OTTHUMG00000108163.4 74529 5508 124 ENSG00000164309.13 CMYA5 chr5 79689877 79800240 + protein_coding KNOWN OTTHUMG00000162548.3 110364 14179 27 ENSG00000250258.1 CTC-431G16.2 chr5 79774348 79816190 - antisense NOVEL OTTHUMG00000162658.1 41843 460 5 ENSG00000238254.3 CTC-431G16.3 chr5 79849552 79849846 - processed_pseudogene KNOWN OTTHUMG00000162656.1 295 295 1 ENSG00000250888.1 LINC01455 chr5 79936579 79967626 + antisense NOVEL OTTHUMG00000162549.1 31048 561 3 ENSG00000177034.13 MTX3 chr5 79976731 79991262 - protein_coding KNOWN OTTHUMG00000162547.6 14532 7916 31 ENSG00000236360.2 RP11-334A14.2 chr1 52993201 52993702 - processed_pseudogene KNOWN OTTHUMG00000008918.1 502 502 1 ENSG00000113296.13 THBS4 chr5 79991311 80083287 + protein_coding KNOWN OTTHUMG00000108173.2 91977 4605 66 ENSG00000251050.1 RP11-168A11.4 chr5 80019609 80019920 + processed_pseudogene KNOWN OTTHUMG00000162562.1 312 312 1 ENSG00000249778.1 TRMT112P2 chr5 80033171 80033302 - processed_pseudogene KNOWN OTTHUMG00000162546.1 132 132 1 ENSG00000249825.4 CTD-2201I18.1 chr5 80052374 80083654 - antisense NOVEL OTTHUMG00000162569.1 31281 3233 12 ENSG00000164300.14 SERINC5 chr5 80111651 80256079 - protein_coding KNOWN OTTHUMG00000162563.9 144429 9583 58 ENSG00000251675.1 CTC-458I2.2 chr5 80128361 80143883 + antisense NOVEL OTTHUMG00000162657.1 15523 664 3 ENSG00000249438.2 KRT18P45 chr5 80288449 80289781 + processed_pseudogene KNOWN OTTHUMG00000162513.2 1333 1333 1 ENSG00000184188.6 CTC-512J14.7 chr5 80299678 80302847 - processed_pseudogene KNOWN OTTHUMG00000162537.1 3170 1101 2 ENSG00000251828.1 SNORA31 chr5 80306235 80306368 - snoRNA NOVEL NA 134 134 1 ENSG00000244076.1 CTC-512J14.1 chr5 80315671 80315826 + processed_pseudogene KNOWN OTTHUMG00000157779.1 156 156 1 ENSG00000226147.1 TUBBP10 chr1 52994726 52996026 + processed_pseudogene KNOWN OTTHUMG00000008919.1 1301 1301 1 ENSG00000164299.6 SPZ1 chr5 80319625 80321842 + protein_coding KNOWN OTTHUMG00000162514.1 2218 1945 3 ENSG00000227087.4 RBMX2P5 chr5 80331573 80332541 - processed_pseudogene KNOWN OTTHUMG00000162532.1 969 969 1 ENSG00000248569.1 CTC-512J14.5 chr5 80351021 80351956 - processed_pseudogene KNOWN OTTHUMG00000162530.1 936 936 1 ENSG00000220157.4 HNRNPA1P12 chr5 80359080 80360040 - processed_pseudogene KNOWN OTTHUMG00000162536.1 961 961 1 ENSG00000206774.1 RNU6-211P chr5 80365726 80365832 - snRNA KNOWN NA 107 107 1 ENSG00000039319.15 ZFYVE16 chr5 80408013 80479350 + protein_coding KNOWN OTTHUMG00000108178.2 71338 11461 112 ENSG00000249042.4 CTD-2015H6.3 chr5 80482293 80488063 - antisense NOVEL OTTHUMG00000162534.1 5771 1261 6 ENSG00000152380.8 FAM151B chr5 80487969 80542563 + protein_coding KNOWN OTTHUMG00000131303.3 54595 3109 30 ENSG00000242706.2 CTD-2015H6.2 chr5 80498534 80498971 - processed_pseudogene KNOWN OTTHUMG00000157788.2 438 438 1 ENSG00000240003.2 RPL7P24 chr5 80500332 80501400 + processed_pseudogene KNOWN OTTHUMG00000157787.2 1069 752 2 ENSG00000279054.1 AL445183.1 chr1 53053624 53054949 - protein_coding KNOWN NA 1326 48 2 ENSG00000189127.6 ANKRD34B chr5 80556755 80570488 - protein_coding KNOWN OTTHUMG00000162541.1 13734 4024 11 ENSG00000251366.1 DBIP2 chr5 80603383 80603644 - processed_pseudogene KNOWN OTTHUMG00000162653.1 262 262 1 ENSG00000251221.1 LINC01337 chr5 80608623 80622524 - lincRNA NOVEL OTTHUMG00000162533.1 13902 440 2 ENSG00000228716.5 DHFR chr5 80626228 80654983 - protein_coding KNOWN OTTHUMG00000162529.2 28756 4409 34 ENSG00000249655.1 CTC-325J23.2 chr5 80630313 80631590 - antisense NOVEL OTTHUMG00000162535.1 1278 549 2 ENSG00000271043.2 MTRNR2L2 chr5 80650000 80650086 - processed_pseudogene KNOWN OTTHUMG00000184945.2 87 87 1 ENSG00000113318.9 MSH3 chr5 80654648 80876460 + protein_coding KNOWN OTTHUMG00000162540.1 221813 4709 32 ENSG00000248967.1 RP11-241J12.3 chr5 80746339 80746819 - processed_pseudogene KNOWN OTTHUMG00000162531.1 481 481 1 ENSG00000244630.2 RP11-241J12.1 chr5 80855507 80855843 - processed_pseudogene KNOWN OTTHUMG00000157790.2 337 337 1 ENSG00000251450.1 RASGRF2-AS1 chr5 80947697 80960907 - antisense NOVEL OTTHUMG00000162539.1 13211 1166 6 ENSG00000174348.12 PODN chr1 53062052 53085502 + protein_coding KNOWN OTTHUMG00000008934.2 23451 4900 51 ENSG00000113319.10 RASGRF2 chr5 80960672 81230156 + protein_coding KNOWN OTTHUMG00000119015.4 269485 10702 71 ENSG00000251001.1 CTD-2193P3.1 chr5 80997183 80998047 - processed_pseudogene KNOWN OTTHUMG00000162538.1 865 536 2 ENSG00000249772.1 CTD-2193P3.2 chr5 81113385 81114852 - antisense NOVEL OTTHUMG00000162565.1 1468 555 2 ENSG00000247572.6 CKMT2-AS1 chr5 81204084 81301560 - antisense NOVEL OTTHUMG00000162566.2 97477 3884 21 ENSG00000131730.14 CKMT2 chr5 81233285 81266397 + protein_coding KNOWN OTTHUMG00000119013.3 33113 2736 71 ENSG00000248794.1 CTD-2248H3.1 chr5 81242330 81242599 - processed_pseudogene KNOWN OTTHUMG00000162652.1 270 270 1 ENSG00000131732.10 ZCCHC9 chr5 81301590 81313297 + protein_coding KNOWN OTTHUMG00000119014.2 11708 5127 43 ENSG00000172497.7 ACOT12 chr5 81330005 81394179 - protein_coding KNOWN OTTHUMG00000131305.3 64175 2444 29 ENSG00000145687.14 SSBP2 chr5 81413021 81751797 - protein_coding KNOWN OTTHUMG00000119039.3 338777 11284 221 ENSG00000249483.1 CTD-2249K22.1 chr5 81851601 81852201 + lincRNA NOVEL OTTHUMG00000162555.1 601 601 1 ENSG00000232993.1 RP11-334A14.5 chr1 53069938 53085502 - antisense NOVEL OTTHUMG00000008920.1 15565 467 2 ENSG00000214857.4 SHFM1P1 chr5 81892490 81892721 + processed_pseudogene KNOWN OTTHUMG00000162556.1 232 209 2 ENSG00000152348.14 ATG10 chr5 81972025 82276857 + protein_coding KNOWN OTTHUMG00000119041.4 304833 5449 48 ENSG00000264142.1 AC114969.1 chr5 81978250 81978319 + miRNA NOVEL NA 70 70 1 ENSG00000236447.2 ATG10-IT1 chr5 81991995 81992481 + sense_intronic NOVEL OTTHUMG00000162771.1 487 487 1 ENSG00000251495.1 PPIAP11 chr5 82009602 82010094 - processed_pseudogene KNOWN OTTHUMG00000162554.1 493 493 1 ENSG00000248192.1 ATG10-AS1 chr5 82073055 82073702 - antisense NOVEL OTTHUMG00000162770.1 648 648 1 ENSG00000265684.2 RN7SL378P chr5 82078427 82078724 + misc_RNA KNOWN NA 298 298 1 ENSG00000251374.1 RPS23P5 chr5 82265157 82265259 - processed_pseudogene KNOWN OTTHUMG00000162769.1 103 103 1 ENSG00000186468.11 RPS23 chr5 82273358 82278577 - protein_coding KNOWN OTTHUMG00000162557.2 5220 4204 31 ENSG00000205464.10 ATP6AP1L chr5 82279462 82386977 + protein_coding KNOWN OTTHUMG00000162558.3 107516 7185 27 ENSG00000269896.2 RP4-740C4.5 chr1 2350414 2352820 - transcribed_processed_pseudogene KNOWN OTTHUMG00000057495.3 2407 2407 2 ENSG00000227644.2 HIGD1AP11 chr1 53073110 53073389 - processed_pseudogene KNOWN OTTHUMG00000008922.2 280 280 1 ENSG00000248393.1 CTD-2015A6.1 chr5 82545862 82546310 - lincRNA NOVEL OTTHUMG00000162772.1 449 449 1 ENSG00000248870.1 CTD-2015A6.2 chr5 82586776 82587411 - lincRNA NOVEL OTTHUMG00000162768.1 636 636 1 ENSG00000249100.1 CTD-2218K11.2 chr5 82765404 82766333 + lincRNA NOVEL OTTHUMG00000162559.1 930 930 1 ENSG00000240411.2 RPL5P16 chr5 82777797 82778586 + processed_pseudogene KNOWN OTTHUMG00000157791.2 790 790 1 ENSG00000248105.1 CTD-2218K11.3 chr5 82824884 82825184 + processed_pseudogene KNOWN OTTHUMG00000162561.1 301 301 1 ENSG00000281327.1 LINC01338 chr5 82850864 82859836 - lincRNA KNOWN OTTHUMG00000189588.1 8973 632 4 ENSG00000248112.1 RP11-78C3.1 chr5 82919376 82921119 - lincRNA NOVEL OTTHUMG00000162767.1 1744 745 2 ENSG00000249857.1 CTD-2227C6.3 chr5 82940458 82940983 - lincRNA NOVEL OTTHUMG00000162780.1 526 526 1 ENSG00000248400.2 ST13P12 chr5 82968888 82977153 + processed_pseudogene KNOWN OTTHUMG00000162560.2 8266 1094 2 ENSG00000249664.1 CTD-2227C6.2 chr5 83012285 83013109 - lincRNA NOVEL OTTHUMG00000162781.1 825 825 1 ENSG00000162383.10 SLC1A7 chr1 53087179 53142632 - protein_coding KNOWN OTTHUMG00000008937.1 55454 5407 47 ENSG00000271862.1 RP11-343L5.2 chr5 83049376 83050964 - lincRNA NOVEL OTTHUMG00000185533.1 1589 1589 1 ENSG00000174695.8 TMEM167A chr5 83052846 83077863 - protein_coding KNOWN OTTHUMG00000162570.2 25018 4908 20 ENSG00000238835.1 SCARNA18 chr5 83064204 83064337 - snoRNA KNOWN NA 134 134 1 ENSG00000152422.14 XRCC4 chr5 83077498 83353787 + protein_coding KNOWN OTTHUMG00000131319.3 276290 2676 46 ENSG00000243385.2 CTD-2110K23.1 chr5 83201229 83202141 + processed_pseudogene KNOWN OTTHUMG00000157792.2 913 584 2 ENSG00000251552.1 COQ10BP2 chr5 83279921 83280644 - processed_pseudogene KNOWN OTTHUMG00000162567.1 724 724 1 ENSG00000251395.1 FTH1P9 chr5 83426676 83427030 + processed_pseudogene KNOWN OTTHUMG00000162568.1 355 355 1 ENSG00000038427.14 VCAN chr5 83471465 83582303 + protein_coding KNOWN OTTHUMG00000131321.5 110839 14831 104 ENSG00000249835.2 VCAN-AS1 chr5 83531352 83581320 - antisense NOVEL OTTHUMG00000162571.1 49969 877 5 ENSG00000281872.1 AC020921.1 chr5 83593344 83593472 + miRNA NOVEL NA 129 129 1 ENSG00000235563.1 RP11-334A14.8 chr1 53114576 53118609 + antisense NOVEL OTTHUMG00000008925.1 4034 1871 2 ENSG00000145681.9 HAPLN1 chr5 83637805 83721613 - protein_coding KNOWN OTTHUMG00000119045.4 83809 6956 26 ENSG00000253073.1 RN7SKP295 chr5 83685866 83686018 + misc_RNA KNOWN NA 153 153 1 ENSG00000206744.1 RNU6-620P chr5 83703448 83703543 + snRNA KNOWN NA 96 96 1 ENSG00000242858.1 CTC-484M2.1 chr5 83746388 83746989 - processed_pseudogene KNOWN OTTHUMG00000157793.1 602 602 1 ENSG00000202157.1 RNU4-11P chr5 83803554 83803685 + snRNA KNOWN NA 132 132 1 ENSG00000250013.1 RP11-456A14.1 chr5 83875166 83875821 - processed_pseudogene KNOWN OTTHUMG00000162623.1 656 656 1 ENSG00000164176.11 EDIL3 chr5 83940554 84384793 - protein_coding KNOWN OTTHUMG00000119047.2 444240 5738 30 ENSG00000216125.2 AC109496.1 chr5 83973796 83973886 - miRNA NOVEL NA 91 91 1 ENSG00000252861.1 RNU6-448P chr5 84196883 84196989 + snRNA KNOWN NA 107 107 1 ENSG00000250320.4 CTD-2269F5.1 chr5 84384427 84490765 + antisense NOVEL OTTHUMG00000162622.2 106339 1370 22 ENSG00000277397.1 RP5-1024G6.9 chr1 53180921 53186900 + unprocessed_pseudogene KNOWN OTTHUMG00000187525.1 5980 718 2 ENSG00000214853.4 RP11-509M23.1 chr5 84999920 85000295 - processed_pseudogene KNOWN OTTHUMG00000162588.2 376 376 1 ENSG00000249349.1 CTC-384G19.1 chr5 85112342 85112756 - lincRNA NOVEL OTTHUMG00000162573.1 415 415 1 ENSG00000248674.1 RBBP4P6 chr5 85190629 85190830 - processed_pseudogene KNOWN OTTHUMG00000162572.2 202 202 1 ENSG00000250253.3 RP11-1072N2.2 chr5 85210060 85210903 - processed_pseudogene KNOWN OTTHUMG00000162574.2 844 584 2 ENSG00000249792.1 RP11-1072N2.3 chr5 85212958 85213614 - lincRNA NOVEL OTTHUMG00000162786.1 657 657 1 ENSG00000248170.1 RP11-1072N2.4 chr5 85237681 85238074 - processed_pseudogene KNOWN OTTHUMG00000162787.1 394 380 2 ENSG00000248667.1 CTD-2331D11.2 chr5 85420028 85420451 - lincRNA NOVEL OTTHUMG00000162576.1 424 424 1 ENSG00000249023.1 CTD-2331D11.3 chr5 85429702 85430184 + lincRNA NOVEL OTTHUMG00000162575.1 483 483 1 ENSG00000249842.1 CTD-2331D11.4 chr5 85446974 85447758 + lincRNA NOVEL OTTHUMG00000162579.1 785 785 1 ENSG00000243859.3 RPL5P17 chr5 85464434 85465310 + processed_pseudogene KNOWN OTTHUMG00000157794.3 877 877 1 ENSG00000157184.5 CPT2 chr1 53196429 53214197 + protein_coding KNOWN OTTHUMG00000008942.1 17769 3401 8 ENSG00000215953.1 AC026700.1 chr5 85528044 85528134 - miRNA NOVEL NA 91 91 1 ENSG00000251066.1 CTC-534B23.1 chr5 85549409 85549952 + processed_pseudogene KNOWN OTTHUMG00000162577.1 544 544 1 ENSG00000250874.1 CTC-480C2.1 chr5 85663232 85664684 + lincRNA NOVEL OTTHUMG00000162578.1 1453 1453 1 ENSG00000241965.2 RPS2P25 chr5 85762559 85763138 + processed_pseudogene KNOWN OTTHUMG00000157796.3 580 580 1 ENSG00000249153.1 CTD-2036A18.2 chr5 85848502 85849199 + lincRNA NOVEL OTTHUMG00000162794.1 698 698 1 ENSG00000250359.1 PTP4A1P4 chr5 86087526 86087847 + processed_pseudogene KNOWN OTTHUMG00000162586.2 322 322 1 ENSG00000205449.10 NBPF22P chr5 86282460 86296463 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000162585.3 14004 1603 17 ENSG00000280009.1 CTD-2123J17.2 chr5 86305233 86306149 - TEC KNOWN OTTHUMG00000162792.1 917 917 1 ENSG00000248195.1 CTC-261N6.3 chr5 86335024 86335808 + lincRNA NOVEL OTTHUMG00000162791.1 785 785 1 ENSG00000248363.4 CTC-261N6.1 chr5 86353803 86368854 + lincRNA NOVEL OTTHUMG00000162587.1 15052 581 6 ENSG00000236723.2 RP5-1024G6.2 chr1 53209783 53213775 - antisense NOVEL OTTHUMG00000008939.2 3993 1227 5 ENSG00000250124.1 CTC-261N6.2 chr5 86380660 86381426 - lincRNA NOVEL OTTHUMG00000162584.1 767 767 1 ENSG00000251585.1 CTD-2299E8.1 chr5 86402465 86402960 + processed_pseudogene KNOWN OTTHUMG00000162580.2 496 496 1 ENSG00000127184.9 COX7C chr5 86617904 86620962 + protein_coding KNOWN OTTHUMG00000119049.4 3059 1993 21 ENSG00000207013.1 RNU6-804P chr5 86663144 86663250 - snRNA KNOWN NA 107 107 1 ENSG00000250544.1 CTC-493L21.1 chr5 86746818 86749772 + lincRNA NOVEL OTTHUMG00000162607.1 2955 2094 5 ENSG00000248701.1 CTC-493L21.2 chr5 86797685 86800280 + lincRNA NOVEL OTTHUMG00000162606.1 2596 482 2 ENSG00000242477.1 CTD-2161E19.1 chr5 86884231 86884881 - processed_pseudogene KNOWN OTTHUMG00000157797.1 651 651 1 ENSG00000249061.1 RP11-72L22.1 chr5 86967321 87137712 + lincRNA NOVEL OTTHUMG00000162750.1 170392 649 5 ENSG00000251951.1 RN7SKP34 chr5 87102603 87102846 - misc_RNA KNOWN NA 244 244 1 ENSG00000265919.1 MIR4280 chr5 87114879 87114954 - miRNA KNOWN NA 76 76 1 ENSG00000162384.12 C1orf123 chr1 53214099 53220617 - protein_coding KNOWN OTTHUMG00000008940.3 6519 4487 30 ENSG00000233828.3 CTC-242N15.1 chr5 87205408 87240145 - lincRNA NOVEL OTTHUMG00000187233.1 34738 3363 4 ENSG00000145715.13 RASA1 chr5 87267888 87391931 + protein_coding KNOWN OTTHUMG00000162605.2 124044 5232 136 ENSG00000241243.3 RN7SL629P chr5 87294189 87294473 - misc_RNA KNOWN NA 285 285 1 ENSG00000207452.1 RNU6-606P chr5 87299687 87299797 - snRNA KNOWN NA 111 111 1 ENSG00000272367.1 CTC-428H11.2 chr5 87376256 87377180 - antisense NOVEL OTTHUMG00000185537.1 925 925 1 ENSG00000134480.12 CCNH chr5 87391494 87413019 - protein_coding KNOWN OTTHUMG00000119077.4 21526 4660 59 ENSG00000200462.1 RNU6-727P chr5 87420341 87420447 - snRNA KNOWN NA 107 107 1 ENSG00000249362.1 CTD-2316B1.1 chr5 87662042 87679147 + lincRNA NOVEL OTTHUMG00000162592.1 17106 652 2 ENSG00000248708.1 CTD-2316B1.2 chr5 87713135 87733269 - lincRNA NOVEL OTTHUMG00000162593.1 20135 592 3 ENSG00000164180.12 TMEM161B chr5 88189633 88269476 - protein_coding KNOWN OTTHUMG00000131323.5 79844 9598 120 ENSG00000259818.1 RP5-1024G6.7 chr1 53220663 53224253 + antisense NOVEL OTTHUMG00000175833.1 3591 3591 1 ENSG00000279188.1 AC010243.1 chr5 88218891 88219263 + pseudogene NOVEL NA 373 369 2 ENSG00000247828.6 TMEM161B-AS1 chr5 88268895 88436685 + antisense NOVEL OTTHUMG00000162704.4 167791 4439 52 ENSG00000207129.1 RNA5SP187 chr5 88274258 88274376 - rRNA KNOWN NA 119 119 1 ENSG00000240083.2 RPS3AP22 chr5 88381957 88382725 + processed_pseudogene KNOWN OTTHUMG00000157798.3 769 769 1 ENSG00000206958.1 SNORA70 chr5 88382772 88382907 + snoRNA NOVEL NA 136 136 1 ENSG00000250306.1 CTC-498M16.3 chr5 88382948 88383260 + processed_pseudogene KNOWN OTTHUMG00000162784.1 313 313 1 ENSG00000250156.3 CTC-498M16.2 chr5 88408982 88439090 - lincRNA NOVEL OTTHUMG00000185341.2 30109 1721 8 ENSG00000271904.1 CTC-498M16.4 chr5 88433892 88498697 - lincRNA NOVEL OTTHUMG00000162703.2 64806 412 2 ENSG00000245526.7 LINC00461 chr5 88507546 88691041 - lincRNA KNOWN OTTHUMG00000162632.4 183496 6174 64 ENSG00000250705.1 CTC-470C15.1 chr5 88602780 88603117 + processed_pseudogene KNOWN OTTHUMG00000162633.1 338 338 1 ENSG00000162385.9 MAGOH chr1 53226892 53238610 - protein_coding KNOWN OTTHUMG00000008932.1 11719 1463 15 ENSG00000273878.1 MIR9-2 chr5 88666853 88666939 - miRNA KNOWN NA 87 87 1 ENSG00000245864.2 CTC-467M3.1 chr5 88676218 88722831 + antisense NOVEL OTTHUMG00000162629.1 46614 463 4 ENSG00000250377.1 CTC-467M3.3 chr5 88692645 88693972 - lincRNA NOVEL OTTHUMG00000162631.1 1328 676 2 ENSG00000250555.2 CTC-467M3.2 chr5 88692651 88692859 + antisense NOVEL OTTHUMG00000162635.2 209 82 2 ENSG00000081189.12 MEF2C chr5 88717117 88904257 - protein_coding KNOWN OTTHUMG00000162634.8 187141 10736 235 ENSG00000248309.4 MEF2C-AS1 chr5 88883328 89466398 + antisense NOVEL OTTHUMG00000162630.3 583071 5807 59 ENSG00000250831.1 CTD-2232E5.2 chr5 89466537 89470039 - lincRNA NOVEL OTTHUMG00000162670.1 3503 253 2 ENSG00000250437.1 RP11-116A1.1 chr5 89581209 89677701 + lincRNA NOVEL OTTHUMG00000162669.1 96493 420 2 ENSG00000277793.1 AC112179.1 chr5 89749398 89749502 - miRNA NOVEL NA 105 105 1 ENSG00000214942.4 AC113167.1 chr5 89900664 89904908 + lincRNA NOVEL OTTHUMG00000162603.1 4245 584 2 ENSG00000226754.1 RP5-1024G6.5 chr1 53238610 53242783 + antisense NOVEL OTTHUMG00000008941.1 4174 1181 3 ENSG00000249265.1 AC113167.2 chr5 89944910 89947573 + lincRNA NOVEL OTTHUMG00000162602.1 2664 570 2 ENSG00000264342.2 MIR3660 chr5 90016621 90016731 - miRNA KNOWN NA 111 111 1 ENSG00000248555.5 LINC01339 chr5 90158339 90290071 - processed_transcript NOVEL OTTHUMG00000162621.3 131733 1044 19 ENSG00000253321.1 RP11-61G23.2 chr5 90353037 90356609 - lincRNA NOVEL OTTHUMG00000164265.1 3573 572 2 ENSG00000260871.1 CTD-2373J6.1 chr5 90388468 90389363 - sense_overlapping NOVEL OTTHUMG00000174459.1 896 896 1 ENSG00000153140.7 CETN3 chr5 90392261 90409786 - protein_coding KNOWN OTTHUMG00000131326.3 17526 3106 28 ENSG00000255647.3 CTD-2373J6.2 chr5 90410000 90410669 + processed_transcript NOVEL OTTHUMG00000186592.2 670 670 3 ENSG00000176055.9 MBLAC2 chr5 90458203 90474768 - protein_coding KNOWN OTTHUMG00000131327.2 16566 5676 3 ENSG00000113356.9 POLR3G chr5 90471748 90514553 + protein_coding KNOWN OTTHUMG00000162809.3 42806 4019 48 ENSG00000176018.11 LYSMD3 chr5 90515611 90529584 - protein_coding KNOWN OTTHUMG00000162667.2 13974 4459 14 ENSG00000272420.1 RP4-740C4.7 chr1 2363061 2363628 - sense_intronic NOVEL OTTHUMG00000185694.1 568 568 1 ENSG00000157193.13 LRP8 chr1 53242364 53328070 - protein_coding KNOWN OTTHUMG00000008924.4 85707 10258 158 ENSG00000164199.14 GPR98 chr5 90529344 91164221 + protein_coding KNOWN OTTHUMG00000162668.3 634878 23499 178 ENSG00000276922.1 AC099512.1 chr5 90860616 90860727 - miRNA NOVEL NA 112 112 1 ENSG00000249514.1 CTD-2266L18.1 chr5 91030990 91031307 - processed_pseudogene KNOWN OTTHUMG00000162666.1 318 318 1 ENSG00000212930.3 RP11-414H23.2 chr5 91223419 91223967 + lincRNA NOVEL OTTHUMG00000162807.1 549 549 1 ENSG00000251093.1 RP11-414H23.3 chr5 91226475 91227071 - lincRNA NOVEL OTTHUMG00000162808.1 597 597 1 ENSG00000199643.1 RNU4-90P chr5 91270727 91270867 + snRNA KNOWN NA 141 141 1 ENSG00000234292.3 RP11-213H15.1 chr5 91280097 91281142 - lincRNA NOVEL OTTHUMG00000162618.1 1046 1046 1 ENSG00000248323.4 LUCAT1 chr5 91303029 91314402 - lincRNA NOVEL OTTHUMG00000162611.1 11374 2904 11 ENSG00000271762.1 RP11-213H15.4 chr5 91313057 91314402 - lincRNA NOVEL OTTHUMG00000185327.1 1346 549 4 ENSG00000277001.1 Metazoa_SRP chr5 91314716 91314997 - misc_RNA NOVEL NA 282 282 1 ENSG00000234578.1 RP4-784A16.1 chr1 53267935 53268601 + antisense NOVEL OTTHUMG00000008928.1 667 470 2 ENSG00000240388.2 CTD-2061E19.1 chr5 91354478 91354934 + processed_pseudogene KNOWN OTTHUMG00000157801.2 457 457 1 ENSG00000241059.2 CTD-2061E19.6 chr5 91355380 91356026 + antisense NOVEL OTTHUMG00000162816.1 647 647 1 ENSG00000113369.7 ARRDC3 chr5 91368724 91383359 - protein_coding KNOWN OTTHUMG00000162616.2 14636 4934 27 ENSG00000281357.1 ARRDC3-AS1 chr5 91380349 91439085 + lincRNA KNOWN OTTHUMG00000189546.1 58737 2832 9 ENSG00000251356.1 RAB5CP2 chr5 91476382 91477018 + processed_pseudogene KNOWN OTTHUMG00000162620.2 637 637 1 ENSG00000248826.2 PCBP2P3 chr5 91843687 91844529 - processed_pseudogene KNOWN OTTHUMG00000162612.3 843 843 1 ENSG00000276426.1 uc_338 chr5 91844022 91844116 - misc_RNA NOVEL NA 95 95 1 ENSG00000250049.4 RP11-348J24.2 chr5 92082597 92479426 + lincRNA NOVEL OTTHUMG00000162609.2 396830 3453 9 ENSG00000248864.1 RP11-348J24.1 chr5 92329230 92332584 + lincRNA NOVEL OTTHUMG00000162608.1 3355 278 2 ENSG00000264489.2 AC120120.1 chr5 92405941 92406044 - miRNA NOVEL NA 104 104 1 ENSG00000228838.1 RP4-784A16.2 chr1 53288024 53289706 + antisense NOVEL OTTHUMG00000008930.1 1683 675 2 ENSG00000249776.4 RP11-133F8.2 chr5 92410256 92660863 - lincRNA NOVEL OTTHUMG00000162673.1 250608 761 9 ENSG00000249169.1 CTC-529L17.1 chr5 92654848 92679141 + lincRNA NOVEL OTTHUMG00000162625.2 24294 1365 4 ENSG00000249984.1 CTC-529L17.2 chr5 92675956 92688254 - lincRNA NOVEL OTTHUMG00000162675.1 12299 730 2 ENSG00000248588.1 CTC-458G6.4 chr5 92826255 92844004 + lincRNA NOVEL OTTHUMG00000162672.1 17750 585 2 ENSG00000248950.1 LDHBP3 chr5 92840807 92841628 - processed_pseudogene KNOWN OTTHUMG00000160111.1 822 822 1 ENSG00000249958.1 CCT7P2 chr5 92889387 92890840 - processed_pseudogene KNOWN OTTHUMG00000162628.1 1454 1454 1 ENSG00000248528.1 CTC-458G6.2 chr5 92907180 92939591 - lincRNA NOVEL OTTHUMG00000162626.1 32412 707 4 ENSG00000251361.1 CTD-2091N23.1 chr5 93019663 93068669 - lincRNA NOVEL OTTHUMG00000162674.1 49007 625 3 ENSG00000213730.3 POLD2P1 chr5 93267429 93268425 + processed_pseudogene KNOWN OTTHUMG00000162647.2 997 997 1 ENSG00000237187.7 NR2F1-AS1 chr5 93409359 93585648 - antisense NOVEL OTTHUMG00000162643.3 176290 7720 65 ENSG00000225030.1 RP4-784A16.3 chr1 53291791 53292138 - sense_intronic NOVEL OTTHUMG00000008933.1 348 237 2 ENSG00000175745.10 NR2F1 chr5 93583337 93594615 + protein_coding KNOWN OTTHUMG00000119079.2 11279 4201 13 ENSG00000278905.1 RP11-65F13.3 chr5 93600357 93603598 + TEC KNOWN OTTHUMG00000162645.2 3242 3242 1 ENSG00000113391.15 FAM172A chr5 93618069 94111699 - protein_coding KNOWN OTTHUMG00000131329.4 493631 5071 67 ENSG00000251725.1 MIR2277 chr5 93620696 93620788 - miRNA KNOWN NA 93 93 1 ENSG00000249353.2 NPM1P27 chr5 93682838 93683667 - processed_pseudogene KNOWN OTTHUMG00000162646.3 830 830 1 ENSG00000248483.5 POU5F2 chr5 93734806 93741637 - protein_coding KNOWN OTTHUMG00000162644.6 6832 6832 2 ENSG00000272406.1 RP11-185E12.2 chr5 93741640 93743500 + lincRNA NOVEL OTTHUMG00000182153.2 1861 548 2 ENSG00000251023.1 RP11-549J18.1 chr5 93860669 93863825 - sense_intronic NOVEL OTTHUMG00000162817.1 3157 3157 1 ENSG00000185261.12 KIAA0825 chr5 94152966 94618604 - protein_coding KNOWN OTTHUMG00000131331.7 465639 10415 54 ENSG00000251544.1 MTND5P12 chr5 94567461 94568909 + processed_pseudogene KNOWN OTTHUMG00000162663.1 1449 1449 1 ENSG00000232762.1 RP4-784A16.4 chr1 53304536 53307462 + antisense NOVEL OTTHUMG00000008935.1 2927 752 6 ENSG00000254132.1 MTND6P3 chr5 94568929 94569470 - processed_pseudogene KNOWN OTTHUMG00000164091.2 542 542 1 ENSG00000251340.1 RP11-461G12.2 chr5 94569540 94570676 + processed_pseudogene KNOWN OTTHUMG00000162662.1 1137 1137 1 ENSG00000232578.4 CTC-303L1.1 chr5 94592771 94594791 + processed_pseudogene KNOWN OTTHUMG00000162664.1 2021 2021 1 ENSG00000270133.1 CTC-303L1.2 chr5 94611906 94618122 - sense_intronic NOVEL OTTHUMG00000183942.1 6217 409 3 ENSG00000133302.11 ANKRD32 chr5 94618347 94739436 + protein_coding KNOWN OTTHUMG00000121133.6 121090 7185 56 ENSG00000175471.18 MCTP1 chr5 94703741 95284575 - protein_coding KNOWN OTTHUMG00000162742.7 580835 12089 194 ENSG00000249175.1 CTC-484P3.3 chr5 94788789 94793599 + antisense NOVEL OTTHUMG00000162796.1 4811 1940 4 ENSG00000243806.1 RPL7P18 chr5 94825961 94826694 - processed_pseudogene KNOWN OTTHUMG00000157803.1 734 734 1 ENSG00000276514.1 uc_338 chr5 94877599 94877777 - misc_RNA NOVEL NA 179 179 1 ENSG00000249545.1 CTC-558O19.1 chr5 94979151 94980893 + antisense NOVEL OTTHUMG00000162795.1 1743 527 2 ENSG00000225675.2 RP4-784A16.5 chr1 53328233 53336509 + lincRNA NOVEL OTTHUMG00000008948.2 8277 567 3 ENSG00000153347.8 FAM81B chr5 95391344 95450454 + protein_coding KNOWN OTTHUMG00000162837.3 59111 2495 51 ENSG00000225165.3 CTD-2538A21.1 chr5 95440044 95440687 + processed_pseudogene KNOWN OTTHUMG00000162734.1 644 644 1 ENSG00000198677.9 TTC37 chr5 95463895 95555007 - protein_coding KNOWN OTTHUMG00000121165.2 91113 8092 131 ENSG00000212259.1 RNU6-308P chr5 95521369 95521475 + snRNA KNOWN NA 107 107 1 ENSG00000164291.15 ARSK chr5 95555074 95605064 + protein_coding KNOWN OTTHUMG00000121166.2 49991 4314 32 ENSG00000274992.1 AC008547.1 chr5 95608159 95608259 - miRNA NOVEL NA 101 101 1 ENSG00000178015.4 GPR150 chr5 95620078 95622142 + protein_coding KNOWN OTTHUMG00000121170.2 2065 2065 1 ENSG00000175449.12 RFESD chr5 95646754 95684773 + protein_coding KNOWN OTTHUMG00000121168.4 38020 5062 32 ENSG00000145757.14 SPATA9 chr5 95652181 95698711 - protein_coding KNOWN OTTHUMG00000121169.4 46531 2811 39 ENSG00000250240.4 CTD-2154I11.2 chr5 95701249 95732295 - antisense NOVEL OTTHUMG00000162735.1 31047 909 7 ENSG00000226938.1 RP11-117D22.1 chr1 53348488 53349233 - lincRNA NOVEL OTTHUMG00000008075.1 746 383 2 ENSG00000164292.11 RHOBTB3 chr5 95713522 95824383 + protein_coding KNOWN OTTHUMG00000121171.2 110862 8833 62 ENSG00000173221.12 GLRX chr5 95751319 95823005 - protein_coding KNOWN OTTHUMG00000121167.3 71687 6508 20 ENSG00000251348.1 HSPD1P11 chr5 95768999 95770700 + processed_pseudogene KNOWN OTTHUMG00000162737.1 1702 1702 1 ENSG00000251000.1 AC008592.3 chr5 95834424 95835046 - processed_pseudogene KNOWN OTTHUMG00000162736.1 623 418 2 ENSG00000251409.1 AC008592.4 chr5 95835943 95852721 - lincRNA NOVEL OTTHUMG00000162741.1 16779 450 2 ENSG00000272021.1 AC008592.8 chr5 95849309 95849855 + lincRNA NOVEL OTTHUMG00000185539.1 547 547 1 ENSG00000236882.6 LINC01554 chr5 95852232 95860133 + lincRNA KNOWN OTTHUMG00000122084.4 7902 2061 9 ENSG00000250362.1 AC008592.5 chr5 95861786 95874519 + processed_transcript NOVEL OTTHUMG00000162740.1 12734 850 5 ENSG00000118985.13 ELL2 chr5 95885098 95962071 - protein_coding KNOWN OTTHUMG00000122085.2 76974 7246 30 ENSG00000251314.2 CTD-2337A12.1 chr5 95962001 96631085 + antisense NOVEL OTTHUMG00000162821.1 669085 1488 9 ENSG00000230138.1 RP11-117D22.2 chr1 53366668 53368245 - lincRNA NOVEL OTTHUMG00000008077.1 1578 850 2 ENSG00000250955.1 AC008592.7 chr5 95964999 95986311 - lincRNA NOVEL OTTHUMG00000162822.1 21313 571 4 ENSG00000213716.3 FABP5P5 chr5 95973041 95973446 - processed_pseudogene KNOWN OTTHUMG00000162739.1 406 406 1 ENSG00000250551.1 RP11-254I22.1 chr5 96050115 96215519 + lincRNA NOVEL OTTHUMG00000162825.1 165405 704 3 ENSG00000207578.1 MIR583 chr5 96079138 96079212 + miRNA KNOWN NA 75 75 1 ENSG00000206997.1 RNU6-524P chr5 96210121 96210227 - snRNA KNOWN NA 107 107 1 ENSG00000249746.1 RP11-254I22.3 chr5 96213346 96215075 - lincRNA NOVEL OTTHUMG00000162820.1 1730 652 2 ENSG00000250158.1 RP11-254I22.2 chr5 96247776 96278751 + lincRNA NOVEL OTTHUMG00000162824.1 30976 406 2 ENSG00000175426.9 PCSK1 chr5 96390415 96434143 - protein_coding KNOWN OTTHUMG00000122089.2 43729 5307 41 ENSG00000153113.22 CAST chr5 96525267 96779595 + protein_coding KNOWN OTTHUMG00000128413.10 254329 12448 674 ENSG00000238518.1 AC020900.1 chr5 96590192 96590276 - miRNA NOVEL NA 85 85 1 ENSG00000236253.6 SLC25A3P1 chr1 53413149 53440020 - transcribed_processed_pseudogene KNOWN OTTHUMG00000008078.3 26872 3164 12 ENSG00000249180.1 CTC-506B8.1 chr5 96741079 96742698 - antisense NOVEL OTTHUMG00000162823.1 1620 565 2 ENSG00000164307.11 ERAP1 chr5 96760810 96808100 - protein_coding KNOWN OTTHUMG00000128721.3 47291 7945 66 ENSG00000248734.2 CTD-2260A17.1 chr5 96784777 96785999 + antisense NOVEL OTTHUMG00000162841.2 1223 1001 4 ENSG00000281288.1 AC008906.1 chr5 96802960 96803102 + miRNA NOVEL NA 143 143 1 ENSG00000272109.1 CTD-2260A17.3 chr5 96804353 96806105 + antisense NOVEL OTTHUMG00000185540.1 1753 569 3 ENSG00000247121.5 CTD-2260A17.2 chr5 96814028 96935809 - antisense NOVEL OTTHUMG00000162867.1 121782 2536 14 ENSG00000164308.15 ERAP2 chr5 96875939 96919716 + protein_coding KNOWN OTTHUMG00000128718.2 43778 7422 100 ENSG00000113441.14 LNPEP chr5 96935394 97037515 + protein_coding KNOWN OTTHUMG00000128719.4 102122 15266 44 ENSG00000227836.1 AC008850.3 chr5 96942299 96943184 + processed_pseudogene KNOWN OTTHUMG00000150258.1 886 362 2 ENSG00000200884.1 Y_RNA chr5 96962656 96962757 - misc_RNA NOVEL NA 102 102 1 ENSG00000143006.7 DMRTB1 chr1 53459399 53467488 + protein_coding KNOWN OTTHUMG00000008080.1 8090 2440 7 ENSG00000213701.4 SETP22 chr5 97056402 97057358 - processed_pseudogene KNOWN OTTHUMG00000162868.2 957 957 1 ENSG00000251513.2 CTD-2215E18.1 chr5 97089075 97437217 + lincRNA NOVEL OTTHUMG00000162866.2 348143 1793 7 ENSG00000281286.1 AC008865.1 chr5 97091175 97091303 + miRNA NOVEL NA 129 129 1 ENSG00000145721.10 LIX1 chr5 97091867 97142872 - protein_coding KNOWN OTTHUMG00000128720.3 51006 4115 10 ENSG00000058729.9 RIOK2 chr5 97160867 97183260 - protein_coding KNOWN OTTHUMG00000128723.2 22394 5502 32 ENSG00000206698.1 RNU1-73P chr5 97175950 97176113 - snRNA KNOWN NA 164 164 1 ENSG00000248758.1 CTD-2215E18.2 chr5 97188090 97201880 - antisense NOVEL OTTHUMG00000162865.1 13791 193 2 ENSG00000251054.1 CTD-2215E18.3 chr5 97223371 97227957 - lincRNA NOVEL OTTHUMG00000162869.1 4587 414 2 ENSG00000249761.1 CTD-2278B20.1 chr5 97336858 97337040 - processed_pseudogene KNOWN OTTHUMG00000162699.1 183 183 1 ENSG00000251389.1 YTHDF1P1 chr5 97368776 97370421 + processed_pseudogene KNOWN OTTHUMG00000162697.2 1646 1646 1 ENSG00000157916.17 RER1 chr1 2391775 2405444 + protein_coding KNOWN OTTHUMG00000001403.4 13670 5691 57 ENSG00000174332.4 GLIS1 chr1 53506237 53738106 - protein_coding KNOWN OTTHUMG00000008079.2 231870 3113 20 ENSG00000249977.1 RP11-155G15.3 chr5 97449358 97449741 - processed_pseudogene KNOWN OTTHUMG00000162698.1 384 384 1 ENSG00000250331.1 LINC01340 chr5 97504696 97671046 + lincRNA NOVEL OTTHUMG00000162701.1 166351 724 4 ENSG00000248931.1 RP11-72K17.2 chr5 97677547 97678681 - processed_pseudogene KNOWN OTTHUMG00000162798.1 1135 1135 1 ENSG00000251193.1 RP11-72K17.1 chr5 97737894 97738913 + processed_pseudogene KNOWN OTTHUMG00000162700.2 1020 1020 1 ENSG00000248202.1 RP11-455B3.1 chr5 97881420 97922695 + lincRNA NOVEL OTTHUMG00000162710.1 41276 829 4 ENSG00000249101.1 AC008834.2 chr5 98025965 98026139 + processed_pseudogene KNOWN OTTHUMG00000162718.1 175 175 1 ENSG00000248901.1 AC008834.1 chr5 98086260 98161193 - lincRNA NOVEL OTTHUMG00000162711.1 74934 651 5 ENSG00000249135.1 RP11-274E7.1 chr5 98203059 98205193 + processed_pseudogene KNOWN OTTHUMG00000162715.1 2135 523 2 ENSG00000238000.1 RP11-274E7.2 chr5 98213402 98214121 + processed_pseudogene KNOWN OTTHUMG00000162714.1 720 720 1 ENSG00000176183.8 CH17-12M21.1 chr5 98338744 98339832 + processed_pseudogene KNOWN OTTHUMG00000162713.1 1089 1089 1 ENSG00000239007.1 RNU7-95P chr1 53688749 53688812 - snRNA KNOWN NA 64 64 1 ENSG00000250221.1 KRT8P32 chr5 98392070 98393530 - processed_pseudogene KNOWN OTTHUMG00000162712.1 1461 1461 1 ENSG00000250830.1 MRPS35P2 chr5 98402542 98402732 - processed_pseudogene KNOWN OTTHUMG00000162717.1 191 191 1 ENSG00000249990.1 RP11-474J18.2 chr5 98409675 98410100 - processed_pseudogene KNOWN OTTHUMG00000162716.1 426 426 1 ENSG00000249448.1 RP11-474J18.1 chr5 98410235 98411792 - processed_pseudogene KNOWN OTTHUMG00000162709.1 1558 1558 1 ENSG00000251102.1 CTBP2P4 chr5 98576341 98577260 + processed_pseudogene KNOWN OTTHUMG00000162748.1 920 920 1 ENSG00000223053.1 AC022142.1 chr5 98639097 98639231 - miRNA NOVEL NA 135 135 1 ENSG00000251553.1 CTC-463N11.1 chr5 98679402 98681367 + processed_pseudogene KNOWN OTTHUMG00000162746.1 1966 1966 1 ENSG00000174136.10 RGMB chr5 98768650 98798643 + protein_coding KNOWN OTTHUMG00000162745.1 29994 6671 23 ENSG00000246763.5 RGMB-AS1 chr5 98769618 98773469 - antisense NOVEL OTTHUMG00000162743.1 3852 2344 12 ENSG00000279232.1 DKFZp434P228 chr5 98792863 98795766 - protein_coding KNOWN NA 2904 2904 1 ENSG00000058804.11 NDC1 chr1 53765460 53838860 - protein_coding KNOWN OTTHUMG00000008073.1 73401 5135 23 ENSG00000250162.1 CSNK1A1P3 chr5 98833382 98833711 + processed_pseudogene KNOWN OTTHUMG00000162747.2 330 330 1 ENSG00000153922.9 CHD1 chr5 98853985 98928957 - protein_coding KNOWN OTTHUMG00000162744.3 74973 10437 114 ENSG00000222610.1 RNU6-402P chr5 98889731 98889833 + snRNA KNOWN NA 103 103 1 ENSG00000248489.1 CTD-2007H13.3 chr5 98929171 98995013 + lincRNA NOVEL OTTHUMG00000162749.1 65843 478 3 ENSG00000200351.1 Y_RNA chr5 98936638 98936747 - misc_RNA NOVEL NA 110 110 1 ENSG00000241597.2 CTD-2007H13.1 chr5 98954394 98954972 + processed_pseudogene KNOWN OTTHUMG00000157805.2 579 579 1 ENSG00000249444.2 RP11-93O17.1 chr5 99489559 99499367 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000162760.3 9809 680 3 ENSG00000206356.5 RP11-93O17.2 chr5 99522311 99525462 - processed_pseudogene KNOWN OTTHUMG00000162762.2 3152 3152 1 ENSG00000227762.4 GUSBP8 chr5 99532628 99534611 + unprocessed_pseudogene KNOWN OTTHUMG00000162761.2 1984 679 4 ENSG00000249515.1 CTD-2151A2.1 chr5 99549432 99577957 + lincRNA NOVEL OTTHUMG00000162763.1 28526 336 2 ENSG00000201003.1 SNORA58 chr1 53771018 53771153 - snoRNA NOVEL NA 136 136 1 ENSG00000248236.1 CTD-2151A2.2 chr5 99594329 99594740 - processed_pseudogene KNOWN OTTHUMG00000162766.1 412 412 1 ENSG00000248928.1 CTD-2151A2.3 chr5 99594880 99595297 + processed_pseudogene KNOWN OTTHUMG00000162764.1 418 418 1 ENSG00000250391.1 CTD-2160D9.1 chr5 99948295 99949583 - processed_pseudogene KNOWN OTTHUMG00000162802.1 1289 1289 1 ENSG00000249963.1 EEF1A1P20 chr5 99996547 99997932 + processed_pseudogene KNOWN OTTHUMG00000162803.1 1386 1386 1 ENSG00000199378.1 Y_RNA chr5 100021804 100021906 + misc_RNA NOVEL NA 103 103 1 ENSG00000270232.1 RP11-475J5.7 chr5 100045928 100046374 - processed_pseudogene KNOWN OTTHUMG00000185126.1 447 447 1 ENSG00000270230.1 RP11-475J5.11 chr5 100046450 100046970 + processed_pseudogene KNOWN OTTHUMG00000185127.1 521 521 1 ENSG00000271687.1 MTND5P10 chr5 100046977 100048785 - processed_pseudogene KNOWN OTTHUMG00000185128.1 1809 1809 1 ENSG00000270906.1 RP11-475J5.6 chr5 100048988 100050362 - processed_pseudogene KNOWN OTTHUMG00000185129.1 1375 1375 1 ENSG00000270350.1 RP11-475J5.9 chr5 100050359 100050650 - processed_pseudogene KNOWN OTTHUMG00000185130.1 292 292 1 ENSG00000229687.2 RP4-654H19.2 chr1 53841547 53841832 + processed_pseudogene KNOWN OTTHUMG00000008076.2 286 286 1 ENSG00000264839.1 AC113407.1 chr5 100050365 100050438 + miRNA NOVEL NA 74 74 1 ENSG00000271480.1 RP11-475J5.10 chr5 100050719 100051063 - processed_pseudogene KNOWN OTTHUMG00000185131.1 345 345 1 ENSG00000270388.1 RP11-475J5.8 chr5 100051133 100051916 - processed_pseudogene KNOWN OTTHUMG00000185132.1 784 784 1 ENSG00000270307.1 MTATP6P2 chr5 100051920 100052597 - processed_pseudogene KNOWN OTTHUMG00000185133.1 678 678 1 ENSG00000270225.1 RP11-475J5.4 chr5 100052859 100053539 - processed_pseudogene KNOWN OTTHUMG00000185134.1 681 681 1 ENSG00000271207.1 RP11-475J5.5 chr5 100053686 100055045 - processed_pseudogene KNOWN OTTHUMG00000185135.1 1360 1360 1 ENSG00000274455.1 CTD-2012B7.1 chr5 100062275 100067954 - unprocessed_pseudogene KNOWN OTTHUMG00000187592.1 5680 745 5 ENSG00000207077.1 RNU6-1119P chr5 100153672 100153779 + snRNA KNOWN NA 108 108 1 ENSG00000275374.1 RP11-346J10.2 chr5 100375700 100381398 - unprocessed_pseudogene KNOWN OTTHUMG00000187597.1 5699 747 5 ENSG00000273957.1 RP11-346J10.3 chr5 100388853 100389938 + unprocessed_pseudogene KNOWN OTTHUMG00000187600.1 1086 762 2 ENSG00000058799.12 YIPF1 chr1 53851719 53889834 - protein_coding KNOWN OTTHUMG00000008074.6 38116 2075 70 ENSG00000249787.1 RP11-346J10.1 chr5 100401441 100408899 + lincRNA NOVEL OTTHUMG00000162804.1 7459 563 3 ENSG00000247877.5 CTD-2001C12.1 chr5 100449754 100535262 - lincRNA NOVEL OTTHUMG00000162801.1 85509 1713 10 ENSG00000174132.8 FAM174A chr5 100535305 100586741 + protein_coding KNOWN OTTHUMG00000128726.2 51437 1416 8 ENSG00000250806.2 CTC-293G12.1 chr5 100654112 100657970 - lincRNA NOVEL OTTHUMG00000162806.1 3859 469 3 ENSG00000207269.1 RN7SKP62 chr5 100733058 100733386 + misc_RNA KNOWN NA 329 329 1 ENSG00000113532.11 ST8SIA4 chr5 100806935 100903266 - protein_coding KNOWN OTTHUMG00000128727.6 96332 7794 13 ENSG00000221263.1 MIR548P chr5 100816482 100816565 - miRNA KNOWN NA 84 84 1 ENSG00000277212.1 AC116311.1 chr5 101288712 101288821 + miRNA NOVEL NA 110 110 1 ENSG00000277506.1 Metazoa_SRP chr5 101581830 101582128 + misc_RNA NOVEL NA 299 299 1 ENSG00000251261.4 OR7H2P chr5 101816475 101816780 - unprocessed_pseudogene KNOWN OTTHUMG00000162751.2 306 306 1 ENSG00000211452.9 DIO1 chr1 53891239 53911086 + protein_coding KNOWN OTTHUMG00000008435.4 19848 2282 66 ENSG00000249495.1 RP11-1152B5.1 chr5 101976296 101976798 + processed_pseudogene KNOWN OTTHUMG00000162752.2 503 503 1 ENSG00000277724.1 AC106765.1 chr5 102108666 102108764 - miRNA NOVEL NA 99 99 1 ENSG00000199786.1 RNA5SP188 chr5 102131007 102131135 - rRNA KNOWN NA 129 129 1 ENSG00000248261.1 CTD-2333K2.1 chr5 102144077 102146572 + lincRNA NOVEL OTTHUMG00000162756.1 2496 325 2 ENSG00000173930.8 SLCO4C1 chr5 102233986 102296549 - protein_coding KNOWN OTTHUMG00000162757.1 62564 5334 13 ENSG00000222987.1 RN7SKP68 chr5 102302504 102302810 + misc_RNA KNOWN NA 307 307 1 ENSG00000205359.8 SLCO6A1 chr5 102371782 102499016 - protein_coding KNOWN OTTHUMG00000162759.2 127235 2952 71 ENSG00000249017.1 RP11-58B2.1 chr5 102500541 102505670 + antisense NOVEL OTTHUMG00000162758.1 5130 593 4 ENSG00000250958.1 LINC00492 chr5 102581368 102617589 + lincRNA NOVEL OTTHUMG00000162776.1 36222 593 2 ENSG00000247402.2 CTD-2340E1.2 chr5 102605635 102606197 + lincRNA NOVEL OTTHUMG00000162774.1 563 391 2 ENSG00000081870.10 HSPB11 chr1 53916574 53945929 - protein_coding KNOWN OTTHUMG00000008408.4 29356 3236 24 ENSG00000250682.4 LINC00491 chr5 102609156 102671559 - lincRNA NOVEL OTTHUMG00000162775.1 62404 1227 12 ENSG00000145730.19 PAM chr5 102753981 103031105 + protein_coding KNOWN OTTHUMG00000128729.4 277125 8846 240 ENSG00000175749.11 EIF3KP1 chr5 103032376 103033031 + processed_pseudogene KNOWN OTTHUMG00000162879.1 656 656 1 ENSG00000145723.15 GIN1 chr5 103086000 103120151 - protein_coding KNOWN OTTHUMG00000162811.3 34152 4182 31 ENSG00000145725.18 PPIP5K2 chr5 103120149 103212799 + protein_coding KNOWN OTTHUMG00000181461.3 92651 17270 227 ENSG00000248203.1 CTC-503K11.2 chr5 103246048 103253519 - antisense NOVEL OTTHUMG00000162810.1 7472 485 2 ENSG00000181751.8 C5orf30 chr5 103258702 103278660 + protein_coding KNOWN OTTHUMG00000128738.2 19959 3568 9 ENSG00000250567.1 CTD-2154H6.1 chr5 103408941 103412511 - lincRNA NOVEL OTTHUMG00000162785.1 3571 555 2 ENSG00000226926.5 AC010423.1 chr5 103430406 103526618 - unitary_pseudogene KNOWN OTTHUMG00000154669.2 96213 2034 15 ENSG00000248757.1 CTD-2193G5.1 chr5 103529676 103541985 - lincRNA NOVEL OTTHUMG00000162779.1 12310 432 4 ENSG00000116212.13 LRRC42 chr1 53946077 53968168 + protein_coding KNOWN OTTHUMG00000008436.1 22092 2411 30 ENSG00000112874.8 NUDT12 chr5 103548855 103562793 - protein_coding KNOWN OTTHUMG00000128739.2 13939 4304 18 ENSG00000251026.1 RP11-138J23.1 chr5 104079911 104105403 + lincRNA NOVEL OTTHUMG00000162778.1 25493 574 5 ENSG00000201910.1 RNU1-140P chr5 104098874 104099038 + snRNA KNOWN NA 165 165 1 ENSG00000239808.3 RN7SL255P chr5 104260531 104260826 - misc_RNA KNOWN NA 296 296 1 ENSG00000251574.5 RP11-6N13.1 chr5 104383298 105392970 - lincRNA PUTATIVE OTTHUMG00000163701.2 1009673 2409 28 ENSG00000278958.1 RP11-313L6.2 chr5 104434772 104435499 + TEC KNOWN OTTHUMG00000163150.1 728 728 1 ENSG00000253776.1 RP11-6N13.4 chr5 104773641 104799772 + lincRNA PUTATIVE OTTHUMG00000163152.2 26132 567 2 ENSG00000252881.1 RNU6-334P chr5 104780288 104780389 - snRNA KNOWN NA 102 102 1 ENSG00000253584.1 CTD-2374C24.1 chr5 104917492 105246364 - lincRNA NOVEL OTTHUMG00000163702.1 328873 1202 7 ENSG00000232159.3 RAB9BP1 chr5 105099473 105100098 + processed_pseudogene KNOWN OTTHUMG00000164279.1 626 626 1 ENSG00000219102.3 HNRNPA3P12 chr1 53974969 53976031 - processed_pseudogene KNOWN OTTHUMG00000008438.2 1063 1063 1 ENSG00000201790.1 RNA5SP189 chr5 105922994 105923108 - rRNA KNOWN NA 115 115 1 ENSG00000251204.1 CTC-278L1.1 chr5 106415576 106417241 - processed_pseudogene KNOWN OTTHUMG00000162788.1 1666 1666 1 ENSG00000250145.1 CTD-2285G11.1 chr5 106543066 106544330 - processed_pseudogene KNOWN OTTHUMG00000162800.1 1265 1265 1 ENSG00000252337.1 SNORA31 chr5 106546665 106546803 + snoRNA NOVEL NA 139 139 1 ENSG00000251027.1 CTC-254B4.1 chr5 106815197 107011014 - lincRNA NOVEL OTTHUMG00000162799.1 195818 832 7 ENSG00000250273.1 PSMC1P5 chr5 107195156 107195332 + processed_pseudogene KNOWN OTTHUMG00000162813.1 177 177 1 ENSG00000184349.11 EFNA5 chr5 107376889 107670895 - protein_coding KNOWN OTTHUMG00000128741.3 294007 5703 21 ENSG00000249959.4 RP11-252I13.2 chr5 107699835 107716841 - lincRNA NOVEL OTTHUMG00000162814.1 17007 1016 10 ENSG00000248827.1 RP11-252I13.1 chr5 107724961 107727117 + processed_pseudogene KNOWN OTTHUMG00000162815.1 2157 2157 1 ENSG00000239708.3 RN7SL782P chr5 107734773 107735066 - misc_RNA KNOWN NA 294 294 1 ENSG00000157911.8 PEX10 chr1 2403964 2413797 - protein_coding KNOWN OTTHUMG00000001637.4 9834 3789 35 ENSG00000203985.9 LDLRAD1 chr1 54007299 54018186 - protein_coding KNOWN OTTHUMG00000008433.1 10888 2375 19 ENSG00000251732.1 RN7SKP122 chr5 107810629 107810924 + misc_RNA KNOWN NA 296 296 1 ENSG00000145743.14 FBXL17 chr5 107859035 108382098 - protein_coding KNOWN OTTHUMG00000159785.6 523064 8125 43 ENSG00000244245.1 RP11-120B7.1 chr5 108593609 108593967 + processed_pseudogene KNOWN OTTHUMG00000157808.1 359 359 1 ENSG00000272523.1 LINC01023 chr5 108727825 108728260 - lincRNA NOVEL OTTHUMG00000185544.1 436 436 1 ENSG00000151422.11 FER chr5 108747822 109196841 + protein_coding KNOWN OTTHUMG00000128751.5 449020 13614 88 ENSG00000249921.2 CTC-329H14.1 chr5 108784098 108785552 + processed_pseudogene KNOWN OTTHUMG00000162838.2 1455 948 2 ENSG00000250383.1 CTD-2197I11.1 chr5 108818041 108830790 - antisense NOVEL OTTHUMG00000162849.1 12750 398 2 ENSG00000207404.1 Y_RNA chr5 108891437 108891546 + misc_RNA NOVEL NA 110 110 1 ENSG00000250441.1 RP11-47F1.1 chr5 108894347 108894628 - processed_pseudogene KNOWN OTTHUMG00000162851.1 282 282 1 ENSG00000206593.1 RNU6-47P chr5 109014834 109014940 - snRNA KNOWN NA 107 107 1 ENSG00000116209.10 TMEM59 chr1 54026681 54053504 - protein_coding KNOWN OTTHUMG00000008437.5 26824 9149 55 ENSG00000176857.5 GJA1P1 chr5 109051315 109052457 - processed_pseudogene KNOWN OTTHUMG00000162850.2 1143 1143 1 ENSG00000249476.1 CTD-2587M2.1 chr5 109237120 109326369 - lincRNA NOVEL OTTHUMG00000162848.1 89250 5471 4 ENSG00000198961.8 PJA2 chr5 109334709 109409994 - protein_coding KNOWN OTTHUMG00000128750.2 75286 5217 26 ENSG00000248867.1 CTD-2128F4.1 chr5 109448349 109449063 - processed_pseudogene KNOWN OTTHUMG00000163023.1 715 403 2 ENSG00000251367.1 RP11-231G15.2 chr5 109467353 109467952 + lincRNA NOVEL OTTHUMG00000163118.1 600 600 1 ENSG00000248876.1 RP11-231G15.3 chr5 109470843 109471586 + lincRNA NOVEL OTTHUMG00000163114.1 744 744 1 ENSG00000248440.1 RP11-231G15.1 chr5 109497877 109499108 + lincRNA NOVEL OTTHUMG00000162833.1 1232 566 2 ENSG00000214794.4 KRT18P42 chr5 109588338 109589592 + processed_pseudogene KNOWN OTTHUMG00000162835.1 1255 1255 1 ENSG00000281444.1 AC012603.2 chr5 109672691 109672786 - miRNA NOVEL NA 96 96 1 ENSG00000266090.1 AC012603.1 chr5 109685580 109685692 + miRNA NOVEL NA 113 113 1 ENSG00000280378.1 RP4-758J24.6 chr1 54033126 54034880 - TEC KNOWN OTTHUMG00000186557.1 1755 1755 1 ENSG00000271849.1 CTC-332L22.1 chr5 109687802 109688329 - lincRNA NOVEL OTTHUMG00000185546.1 528 528 1 ENSG00000112893.8 MAN2A1 chr5 109689366 109869625 + protein_coding KNOWN OTTHUMG00000162834.3 180260 11815 36 ENSG00000202512.1 RN7SKP230 chr5 109699500 109699834 - misc_RNA KNOWN NA 335 335 1 ENSG00000249068.1 CTC-287O8.1 chr5 109840128 109840692 - processed_pseudogene KNOWN OTTHUMG00000162836.2 565 565 1 ENSG00000254106.1 AC011366.3 chr5 109883182 109884751 + lincRNA NOVEL OTTHUMG00000163576.1 1570 518 3 ENSG00000253224.1 PGAM5P1 chr5 109884610 109885423 - processed_pseudogene KNOWN OTTHUMG00000163575.1 814 814 1 ENSG00000186952.13 TMEM232 chr5 110289233 110738956 - protein_coding KNOWN OTTHUMG00000163297.8 449724 9563 92 ENSG00000221436.1 MIR548F3 chr5 110513829 110513915 - miRNA KNOWN NA 87 87 1 ENSG00000207177.1 SNORA51 chr5 110684794 110684927 - snoRNA NOVEL NA 134 134 1 ENSG00000164209.15 SLC25A46 chr5 110738136 110765161 + protein_coding KNOWN OTTHUMG00000128794.7 27026 8283 51 ENSG00000116205.9 TCEANC2 chr1 54053587 54112519 + protein_coding KNOWN OTTHUMG00000008434.3 58933 12165 15 ENSG00000270779.1 CTD-2026D23.1 chr5 110908284 110908713 + processed_pseudogene KNOWN OTTHUMG00000184570.1 430 430 1 ENSG00000248966.1 BCLAF1P1 chr5 110948029 110950780 - processed_pseudogene KNOWN OTTHUMG00000163298.1 2752 2752 1 ENSG00000248428.1 CTC-551A13.1 chr5 110970951 111008899 - lincRNA NOVEL OTTHUMG00000163296.1 37949 697 6 ENSG00000251627.1 CTD-2089O24.2 chr5 110983563 110984466 - processed_pseudogene KNOWN OTTHUMG00000163299.1 904 904 1 ENSG00000145777.13 TSLP chr5 111070062 111078024 + protein_coding KNOWN OTTHUMG00000128791.3 7963 4282 11 ENSG00000253613.2 CTC-551A13.2 chr5 111076921 111092115 - antisense NOVEL OTTHUMG00000163703.1 15195 442 4 ENSG00000134987.10 WDR36 chr5 111091716 111130502 + protein_coding KNOWN OTTHUMG00000128790.7 38787 7656 91 ENSG00000250728.1 AC010468.3 chr5 111155244 111156152 - processed_pseudogene KNOWN OTTHUMG00000162846.1 909 458 3 ENSG00000214784.4 AC010468.1 chr5 111192226 111193042 - processed_pseudogene KNOWN OTTHUMG00000157820.1 817 817 1 ENSG00000152495.9 CAMK4 chr5 111223653 111494886 + protein_coding KNOWN OTTHUMG00000128792.2 271234 13910 84 ENSG00000264208.1 MIR4781 chr1 54054079 54054154 + miRNA KNOWN NA 76 76 1 ENSG00000249318.1 AC010468.2 chr5 111265809 111270089 - antisense NOVEL OTTHUMG00000162847.1 4281 438 2 ENSG00000248268.1 CTC-499J9.1 chr5 111277517 111302567 - antisense NOVEL OTTHUMG00000162845.1 25051 565 3 ENSG00000164211.11 STARD4 chr5 111496033 111512590 - protein_coding KNOWN OTTHUMG00000128793.3 16558 5684 56 ENSG00000246859.2 STARD4-AS1 chr5 111512226 111739726 + antisense NOVEL OTTHUMG00000162858.2 227501 5647 9 ENSG00000221310.1 AC008967.1 chr5 111555895 111555980 + miRNA NOVEL NA 86 86 1 ENSG00000249619.1 HMGN1P13 chr5 111572102 111572239 - processed_pseudogene KNOWN OTTHUMG00000162843.1 138 138 1 ENSG00000251099.2 CTD-2367A17.1 chr5 111572236 111572398 + processed_pseudogene KNOWN OTTHUMG00000162844.2 163 163 1 ENSG00000134986.12 NREP chr5 111662621 111997464 - protein_coding KNOWN OTTHUMG00000128795.4 334844 9337 100 ENSG00000253057.1 RN7SKP57 chr5 111719769 111720061 - misc_RNA KNOWN NA 293 293 1 ENSG00000249439.1 HMGN1P14 chr5 111846050 111846566 - processed_pseudogene KNOWN OTTHUMG00000162859.1 517 517 1 ENSG00000225183.1 RP4-758J24.4 chr1 54089856 54090093 + processed_pseudogene KNOWN OTTHUMG00000008450.1 238 238 1 ENSG00000250095.4 NREP-AS1 chr5 111912508 112017309 + antisense NOVEL OTTHUMG00000162860.1 104802 851 9 ENSG00000129595.11 EPB41L4A chr5 112142441 112419316 - protein_coding KNOWN OTTHUMG00000162902.3 276876 8582 103 ENSG00000224032.5 EPB41L4A-AS1 chr5 112160526 112164276 + lincRNA KNOWN OTTHUMG00000128803.3 3751 3344 10 ENSG00000238363.1 SNORA13 chr5 112161485 112161617 + snoRNA KNOWN NA 133 133 1 ENSG00000250882.1 CTC-459M5.1 chr5 112173570 112175548 + antisense NOVEL OTTHUMG00000162896.1 1979 457 2 ENSG00000251187.4 CTC-459M5.2 chr5 112192020 112210139 + antisense NOVEL OTTHUMG00000162900.1 18120 1167 9 ENSG00000251076.1 RP11-526F3.1 chr5 112228283 112257309 + antisense NOVEL OTTHUMG00000162899.1 29027 711 4 ENSG00000248350.1 CTC-470E21.1 chr5 112363456 112363666 - processed_pseudogene KNOWN OTTHUMG00000162898.1 211 211 1 ENSG00000278921.2 EPB41L4A-AS2 chr5 112419583 112420978 + lincRNA NOVEL OTTHUMG00000169519.1 1396 1396 2 ENSG00000248430.1 HMGB3P16 chr5 112452703 112452989 - processed_pseudogene KNOWN OTTHUMG00000162897.1 287 287 1 ENSG00000279049.1 AL353898.1 chr1 54099968 54100224 - pseudogene NOVEL NA 257 255 2 ENSG00000251014.1 RP11-159K7.1 chr5 112546973 112547505 + processed_pseudogene KNOWN OTTHUMG00000162903.1 533 533 1 ENSG00000250358.4 RP11-159K7.2 chr5 112628436 112632100 + lincRNA NOVEL OTTHUMG00000162901.1 3665 950 9 ENSG00000134982.15 APC chr5 112707498 112846239 + protein_coding KNOWN OTTHUMG00000128806.7 138742 12440 100 ENSG00000250045.2 CBX3P3 chr5 112777630 112778161 - processed_pseudogene KNOWN OTTHUMG00000162857.3 532 532 1 ENSG00000212370.1 RNU6-482P chr5 112778363 112778469 + snRNA KNOWN NA 107 107 1 ENSG00000258864.1 CTC-554D6.1 chr5 112827213 112867582 + protein_coding NOVEL OTTHUMG00000171788.2 40370 694 8 ENSG00000153037.11 SRP19 chr5 112861188 112869788 + protein_coding KNOWN OTTHUMG00000186064.2 8601 3632 31 ENSG00000272869.4 CTC-487M23.8 chr5 112861188 112893079 + protein_coding NOVEL OTTHUMG00000128805.5 31892 2174 18 ENSG00000129625.11 REEP5 chr5 112876379 112922539 - protein_coding KNOWN OTTHUMG00000128807.6 46161 4230 31 ENSG00000249947.2 XBP1P1 chr5 112885094 112885745 + processed_pseudogene KNOWN OTTHUMG00000162854.2 652 652 1 ENSG00000157211.10 CDCP2 chr1 54133074 54153770 - protein_coding KNOWN OTTHUMG00000155307.6 20697 3123 7 ENSG00000212643.2 ZRSR1 chr5 112891422 112893094 + protein_coding KNOWN OTTHUMG00000163143.2 1673 1673 1 ENSG00000270067.1 CTC-487M23.5 chr5 112893333 112894001 + antisense NOVEL OTTHUMG00000184069.1 669 669 1 ENSG00000279522.1 CTC-487M23.6 chr5 112894933 112896531 + TEC KNOWN OTTHUMG00000184105.1 1599 1599 1 ENSG00000272389.1 CTC-487M23.7 chr5 112898023 112898371 + antisense NOVEL OTTHUMG00000185547.1 349 349 1 ENSG00000266499.1 AC008536.1 chr5 112905638 112905737 - miRNA NOVEL NA 100 100 1 ENSG00000172795.14 DCP2 chr5 112976702 113020970 + protein_coding KNOWN OTTHUMG00000162853.5 44269 9951 49 ENSG00000171444.16 MCC chr5 113022099 113488830 - protein_coding KNOWN OTTHUMG00000128804.9 466732 10746 90 ENSG00000232633.4 CTD-2201G3.1 chr5 113323028 113437174 + antisense NOVEL OTTHUMG00000162864.2 114147 4194 7 ENSG00000277074.1 AC126917.1 chr5 113327765 113327857 - miRNA NOVEL NA 93 93 1 ENSG00000212122.3 TSSK1B chr5 113432554 113435031 - protein_coding KNOWN OTTHUMG00000128835.2 2478 2478 1 ENSG00000280425.1 RP11-446E24.3 chr1 54138373 54142980 + TEC KNOWN OTTHUMG00000167348.1 4608 4608 1 ENSG00000251741.1 RNU4ATAC13P chr5 113493835 113493960 + snRNA KNOWN NA 126 126 1 ENSG00000047188.14 YTHDC2 chr5 113513683 113595285 + protein_coding KNOWN OTTHUMG00000128837.5 81603 10816 76 ENSG00000251628.1 RP11-371M22.1 chr5 114056006 114057174 + lincRNA NOVEL OTTHUMG00000162873.1 1169 570 2 ENSG00000222706.1 RN7SKP89 chr5 114253513 114253754 + misc_RNA KNOWN NA 242 242 1 ENSG00000080709.13 KCNN2 chr5 114360945 114496640 + protein_coding KNOWN OTTHUMG00000128836.7 135696 3995 46 ENSG00000246316.6 RP11-492A10.1 chr5 114488997 114668410 - antisense NOVEL OTTHUMG00000162871.1 179414 708 9 ENSG00000251542.1 CTC-313D10.1 chr5 114576041 114579970 + lincRNA NOVEL OTTHUMG00000162872.1 3930 751 2 ENSG00000251132.1 RP11-438C19.2 chr5 115031273 115031894 - lincRNA NOVEL OTTHUMG00000163155.1 622 622 1 ENSG00000250242.1 RP11-438C19.1 chr5 115087892 115088475 - lincRNA NOVEL OTTHUMG00000163153.1 584 584 1 ENSG00000152503.8 TRIM36 chr5 115124762 115180546 - protein_coding KNOWN OTTHUMG00000128892.3 55785 6113 49 ENSG00000256407.1 RP11-446E24.4 chr1 54141224 54200073 - protein_coding NOVEL OTTHUMG00000168203.1 58850 2684 11 ENSG00000250472.1 TRIM36-IT1 chr5 115148764 115149644 - sense_intronic NOVEL OTTHUMG00000163154.1 881 881 1 ENSG00000249791.1 CTC-428G20.2 chr5 115188563 115188932 + antisense NOVEL OTTHUMG00000162913.1 370 370 1 ENSG00000164219.8 PGGT1B chr5 115204012 115262872 - protein_coding KNOWN OTTHUMG00000128893.4 58861 10064 28 ENSG00000271797.1 CTC-428G20.6 chr5 115262505 115263448 + antisense NOVEL OTTHUMG00000185548.1 944 944 1 ENSG00000243304.3 CTC-428G20.1 chr5 115264669 115265464 - processed_pseudogene KNOWN OTTHUMG00000157821.3 796 796 1 ENSG00000164221.11 CCDC112 chr5 115267188 115296831 - protein_coding KNOWN OTTHUMG00000128894.3 29644 3289 50 ENSG00000250197.1 HMGN1P15 chr5 115289036 115289330 - processed_pseudogene KNOWN OTTHUMG00000162909.1 295 295 1 ENSG00000249026.2 CTNNAP1 chr5 115389643 115392370 - processed_pseudogene KNOWN OTTHUMG00000162908.2 2728 2728 1 ENSG00000248722.1 AK3P4 chr5 115402380 115402962 + processed_pseudogene KNOWN OTTHUMG00000162914.2 583 583 1 ENSG00000249944.1 CTB-161J7.1 chr5 115489634 115489931 + processed_pseudogene KNOWN OTTHUMG00000162910.1 298 298 1 ENSG00000222623.1 RNU6-1100P chr1 157784 157887 - snRNA KNOWN NA 104 104 1 ENSG00000149527.16 PLCH2 chr1 2425980 2505530 + protein_coding KNOWN OTTHUMG00000000719.3 79551 10781 118 ENSG00000215883.8 CYB5RL chr1 54172336 54200036 - protein_coding KNOWN OTTHUMG00000008082.12 27701 6241 52 ENSG00000249433.1 CTB-161J7.2 chr5 115493557 115493821 + processed_pseudogene KNOWN OTTHUMG00000162906.1 265 265 1 ENSG00000250444.1 CCT5P1 chr5 115512077 115513694 + processed_pseudogene KNOWN OTTHUMG00000162916.1 1618 1618 1 ENSG00000145780.7 FEM1C chr5 115520908 115544894 - protein_coding KNOWN OTTHUMG00000128895.4 23987 5816 3 ENSG00000251201.7 TMED7-TICAM2 chr5 115578642 115626161 - protein_coding KNOWN OTTHUMG00000162911.1 47520 3728 10 ENSG00000243414.5 TICAM2 chr5 115578650 115602479 - protein_coding KNOWN OTTHUMG00000162905.2 23830 3244 4 ENSG00000249249.1 AC010226.4 chr5 115602057 115620659 + antisense NOVEL OTTHUMG00000155201.2 18603 1218 8 ENSG00000134970.13 TMED7 chr5 115613508 115632992 - protein_coding KNOWN OTTHUMG00000132013.6 19485 3894 9 ENSG00000249021.1 CTC-505O3.3 chr5 115691462 115692167 - lincRNA NOVEL OTTHUMG00000163234.1 706 706 1 ENSG00000248709.1 CTC-505O3.2 chr5 115755644 115756286 + lincRNA NOVEL OTTHUMG00000163233.1 643 643 1 ENSG00000251118.1 CTC-505O3.1 chr5 115770586 115770989 + processed_pseudogene KNOWN OTTHUMG00000162915.2 404 404 1 ENSG00000116221.14 MRPL37 chr1 54184041 54225464 + protein_coding KNOWN OTTHUMG00000008118.6 41424 2549 32 ENSG00000222598.1 RNU2-49P chr5 115774319 115774502 - snRNA KNOWN NA 184 184 1 ENSG00000129596.4 CDO1 chr5 115804733 115816954 - protein_coding KNOWN OTTHUMG00000128891.3 12222 2189 16 ENSG00000145782.11 ATG12 chr5 115828200 115841858 - protein_coding KNOWN OTTHUMG00000128889.3 13659 8888 48 ENSG00000177879.13 AP3S1 chr5 115841481 115914081 + protein_coding KNOWN OTTHUMG00000128887.3 72601 3198 37 ENSG00000280329.1 AC026449.1 chr5 115855994 115858468 + protein_coding KNOWN NA 2475 63 3 ENSG00000172901.18 AQPEP chr5 115962454 116027619 + protein_coding KNOWN OTTHUMG00000128890.4 65166 6636 122 ENSG00000248295.2 DDX43P1 chr5 115974513 115976275 - processed_pseudogene KNOWN OTTHUMG00000162907.2 1763 1763 1 ENSG00000268714.3 CTD-2287O16.3 chr5 116022391 116058928 + protein_coding PUTATIVE OTTHUMG00000182724.4 36538 420 3 ENSG00000221778.2 AC034236.2 chr5 116030018 116030111 + miRNA NOVEL NA 94 94 1 ENSG00000220996.1 AC034236.1 chr5 116043171 116043261 - miRNA NOVEL NA 91 91 1 ENSG00000157216.14 SSBP3 chr1 54225432 54413479 - protein_coding KNOWN OTTHUMG00000008264.4 188048 5227 168 ENSG00000268223.2 ARL14EPL chr5 116051466 116060118 + protein_coding NOVEL OTTHUMG00000182725.2 8653 1630 3 ENSG00000185641.6 CTD-2287O16.1 chr5 116051917 116052289 - processed_pseudogene KNOWN OTTHUMG00000157822.2 373 373 1 ENSG00000272265.1 CTD-2287O16.4 chr5 116078110 116078570 - lincRNA NOVEL OTTHUMG00000185551.1 461 461 1 ENSG00000271918.1 CTD-2287O16.5 chr5 116083807 116085416 - antisense NOVEL OTTHUMG00000185552.1 1610 1610 1 ENSG00000145781.7 COMMD10 chr5 116084991 116412762 + protein_coding KNOWN OTTHUMG00000162922.1 327772 2464 36 ENSG00000212457.1 RNU6-644P chr5 116188455 116188552 - snRNA KNOWN NA 98 98 1 ENSG00000232916.1 HMGN2P27 chr5 116218026 116218295 - processed_pseudogene KNOWN OTTHUMG00000162924.1 270 270 1 ENSG00000250015.1 CTC-339F2.2 chr5 116302354 116304134 - lincRNA NOVEL OTTHUMG00000162923.1 1781 206 2 ENSG00000092421.15 SEMA6A chr5 116443616 116574934 - protein_coding KNOWN OTTHUMG00000162987.5 131319 10956 109 ENSG00000248445.4 SEMA6A-AS1 chr5 116447547 116508276 + antisense NOVEL OTTHUMG00000162986.1 60730 2829 14 ENSG00000198711.5 SSBP3-AS1 chr1 54236440 54239063 + antisense KNOWN OTTHUMG00000008365.2 2624 2624 1 ENSG00000239528.1 RPS14P8 chr5 116562562 116562930 + processed_pseudogene KNOWN OTTHUMG00000157827.1 369 369 1 ENSG00000249167.1 CTB-118N6.2 chr5 116574482 116591398 + lincRNA NOVEL OTTHUMG00000162882.1 16917 482 2 ENSG00000197575.6 RPS17P2 chr5 116716243 116716650 + processed_pseudogene KNOWN OTTHUMG00000157828.1 408 408 1 ENSG00000251311.1 RP11-249M12.2 chr5 116742991 116762209 - lincRNA NOVEL OTTHUMG00000162883.1 19219 707 4 ENSG00000249150.1 CTC-472C24.1 chr5 116820993 116830187 - lincRNA NOVEL OTTHUMG00000162884.1 9195 553 3 ENSG00000250650.1 RP11-492L8.1 chr5 117019548 117019679 - processed_pseudogene KNOWN OTTHUMG00000162880.1 132 132 1 ENSG00000250949.1 RP11-492L8.2 chr5 117031200 117038569 + lincRNA NOVEL OTTHUMG00000162881.1 7370 420 2 ENSG00000243758.1 RPL35AP15 chr5 117301104 117301442 - processed_pseudogene KNOWN OTTHUMG00000157829.2 339 339 1 ENSG00000248663.5 LINC00992 chr5 117415509 117546298 + lincRNA NOVEL OTTHUMG00000162885.2 130790 1144 7 ENSG00000251477.1 RP11-74D3.2 chr5 117719240 117722097 - processed_pseudogene KNOWN OTTHUMG00000162893.1 2858 926 2 ENSG00000225632.1 RP5-997D24.3 chr1 54285405 54287371 + antisense NOVEL OTTHUMG00000008263.1 1967 1111 2 ENSG00000249582.1 RPL7L1P4 chr5 117778826 117779532 - processed_pseudogene KNOWN OTTHUMG00000162891.1 707 707 1 ENSG00000281682.1 AC114945.1 chr5 117924987 117925122 + miRNA NOVEL NA 136 136 1 ENSG00000249797.1 CTD-3179P9.1 chr5 117925008 118266035 + lincRNA NOVEL OTTHUMG00000162888.1 341028 1319 6 ENSG00000250427.1 CTD-3179P9.2 chr5 118282575 118284782 + lincRNA NOVEL OTTHUMG00000162887.1 2208 1223 2 ENSG00000250891.1 CTD-2281M20.1 chr5 118468156 118562117 - lincRNA NOVEL OTTHUMG00000162951.2 93962 3385 13 ENSG00000249551.1 RP11-2N5.2 chr5 118575575 118581324 + lincRNA NOVEL OTTHUMG00000162954.1 5750 581 5 ENSG00000249128.1 RP11-2N5.1 chr5 118596188 118628092 + lincRNA NOVEL OTTHUMG00000162955.1 31905 543 5 ENSG00000238904.1 RNU7-34P chr5 118758211 118758274 + snRNA KNOWN NA 64 64 1 ENSG00000249426.1 CTC-448D22.1 chr5 118760474 118785459 - lincRNA NOVEL OTTHUMG00000162962.1 24986 497 2 ENSG00000169570.8 DTWD2 chr5 118837322 118988545 - protein_coding KNOWN OTTHUMG00000162956.6 151224 4617 21 ENSG00000232245.1 RP4-705F19.1 chr1 54416256 54420860 + lincRNA NOVEL OTTHUMG00000008362.1 4605 289 2 ENSG00000197744.5 PTMAP2 chr5 118973796 118974122 + processed_pseudogene KNOWN OTTHUMG00000162960.1 327 327 1 ENSG00000249494.4 CTB-161M19.4 chr5 119006347 119070890 - antisense NOVEL OTTHUMG00000162961.1 64544 1335 11 ENSG00000250678.1 CTB-161M19.1 chr5 119010060 119010542 + processed_pseudogene KNOWN OTTHUMG00000162953.1 483 483 1 ENSG00000250928.1 CTB-161M19.2 chr5 119011471 119012056 + processed_pseudogene KNOWN OTTHUMG00000162952.1 586 586 1 ENSG00000172869.13 DMXL1 chr5 119037772 119249138 + protein_coding KNOWN OTTHUMG00000128898.4 211367 13680 154 ENSG00000248885.1 RP11-950K24.2 chr5 119126782 119128444 - processed_pseudogene KNOWN OTTHUMG00000162957.1 1663 1271 2 ENSG00000248979.2 LAMTOR3P2 chr5 119132651 119132882 - processed_pseudogene KNOWN OTTHUMG00000162950.2 232 232 1 ENSG00000206786.1 RNU6-701P chr5 119138859 119138965 + snRNA KNOWN NA 107 107 1 ENSG00000264536.1 MIR5706 chr5 119154637 119154716 + miRNA KNOWN NA 80 80 1 ENSG00000275541.1 AC118465.1 chr5 119163298 119163388 - miRNA NOVEL NA 91 91 1 ENSG00000281315.1 AC099796.2 chr1 54481504 54481566 - miRNA NOVEL NA 63 63 1 ENSG00000266587.1 AC027320.1 chr5 119257340 119257437 - miRNA NOVEL NA 98 98 1 ENSG00000145779.7 TNFAIP8 chr5 119268692 119399688 + protein_coding KNOWN OTTHUMG00000162949.5 130997 9591 17 ENSG00000243333.3 RN7SL174P chr5 119306343 119306631 - misc_RNA KNOWN NA 289 289 1 ENSG00000281463.1 AC035144.1 chr5 119408205 119408305 - miRNA NOVEL NA 101 101 1 ENSG00000202092.1 RNA5SP190 chr5 119445716 119445833 + rRNA KNOWN NA 118 118 1 ENSG00000133835.13 HSD17B4 chr5 119452443 119637199 + protein_coding KNOWN OTTHUMG00000128899.5 184757 8231 298 ENSG00000213663.4 CTD-2158P22.1 chr5 119547131 119547606 - processed_pseudogene KNOWN OTTHUMG00000157831.1 476 476 1 ENSG00000249919.1 FABP5P6 chr5 119555250 119555658 - processed_pseudogene KNOWN OTTHUMG00000162947.1 409 409 1 ENSG00000164334.14 FAM170A chr5 119629559 119635822 + protein_coding KNOWN OTTHUMG00000162946.1 6264 1378 30 ENSG00000250895.1 CTD-2158P22.4 chr5 119652523 119653000 - processed_pseudogene KNOWN OTTHUMG00000162945.1 478 478 1 ENSG00000265404.1 AC099796.1 chr1 54504668 54504770 + miRNA NOVEL NA 103 103 1 ENSG00000234259.3 CTC-507E12.1 chr5 119680197 119681080 + processed_pseudogene KNOWN OTTHUMG00000162948.1 884 884 1 ENSG00000251293.1 CTC-552D5.1 chr5 120245448 120333502 - lincRNA NOVEL OTTHUMG00000162926.1 88055 433 2 ENSG00000251975.1 RNU6-718P chr5 120337549 120337653 - snRNA KNOWN NA 105 105 1 ENSG00000261036.1 RP11-574H6.1 chr5 120345907 120404837 - lincRNA NOVEL OTTHUMG00000173468.1 58931 517 2 ENSG00000184838.13 PRR16 chr5 120464278 120687332 + protein_coding KNOWN OTTHUMG00000128903.2 223055 2274 14 ENSG00000270741.1 RP11-565F4.1 chr5 120658077 120658371 - processed_pseudogene KNOWN OTTHUMG00000184307.1 295 295 1 ENSG00000222609.1 RNU4-69P chr5 120710698 120710840 - snRNA KNOWN NA 143 143 1 ENSG00000248927.1 CTD-2334D19.1 chr5 120781218 120790778 + lincRNA NOVEL OTTHUMG00000162927.1 9561 1114 2 ENSG00000251135.2 AC008565.1 chr5 121040090 121044032 + processed_pseudogene KNOWN OTTHUMG00000163021.2 3943 885 3 ENSG00000248853.1 CTD-2613O8.1 chr5 121059244 121060953 + processed_pseudogene KNOWN OTTHUMG00000163022.1 1710 666 2 ENSG00000235741.1 RP5-866L20.1 chr1 54516412 54517259 - lincRNA NOVEL OTTHUMG00000008359.1 848 683 2 ENSG00000250847.1 CTD-2020P22.1 chr5 121195980 121196210 - unprocessed_pseudogene KNOWN OTTHUMG00000162942.1 231 231 1 ENSG00000229855.7 CTC-546K23.1 chr5 121199704 121357398 + lincRNA NOVEL OTTHUMG00000162941.5 157695 2713 26 ENSG00000279860.1 CTC-546K23.2 chr5 121363002 121365314 + TEC KNOWN OTTHUMG00000175432.1 2313 2313 1 ENSG00000244088.1 RP11-510I6.1 chr5 121575848 121576320 - processed_pseudogene KNOWN OTTHUMG00000157833.1 473 473 1 ENSG00000213661.3 RP11-510I6.2 chr5 121616247 121616807 + processed_pseudogene KNOWN OTTHUMG00000157834.1 561 561 1 ENSG00000249600.1 RP11-510I6.3 chr5 121671373 121671872 - processed_pseudogene KNOWN OTTHUMG00000162943.1 500 500 1 ENSG00000181867.2 FTMT chr5 121851955 121852833 + protein_coding KNOWN OTTHUMG00000128912.1 879 879 1 ENSG00000151304.5 SRFBP1 chr5 121961961 122075570 + protein_coding KNOWN OTTHUMG00000162970.1 113610 3111 11 ENSG00000113083.11 LOX chr5 122063195 122078285 - protein_coding KNOWN OTTHUMG00000128914.2 15091 5468 30 ENSG00000247311.2 CTC-441N14.2 chr5 122128762 122154856 - antisense NOVEL OTTHUMG00000162968.1 26095 731 2 ENSG00000237173.1 RP5-866L20.2 chr1 54524824 54524931 + processed_pseudogene KNOWN OTTHUMG00000008360.1 108 108 1 ENSG00000164185.4 ZNF474 chr5 122129513 122179617 + protein_coding KNOWN OTTHUMG00000128911.2 50105 2364 12 ENSG00000249610.1 CTC-441N14.1 chr5 122154496 122156015 - antisense NOVEL OTTHUMG00000162971.1 1520 428 2 ENSG00000250803.4 CTC-441N14.4 chr5 122157368 122182658 + transcribed_processed_pseudogene KNOWN OTTHUMG00000162972.1 25291 1591 13 ENSG00000272139.1 CTD-2544H17.2 chr5 122311297 122311673 - antisense NOVEL OTTHUMG00000185556.1 377 377 1 ENSG00000064692.17 SNCAIP chr5 122311354 122464219 + protein_coding KNOWN OTTHUMG00000128915.5 152866 7325 178 ENSG00000249621.1 CTD-2544H17.1 chr5 122321291 122323358 - lincRNA NOVEL OTTHUMG00000162974.1 2068 583 2 ENSG00000249916.1 CTD-2280E9.1 chr5 122369762 122383568 - antisense NOVEL OTTHUMG00000162969.1 13807 563 4 ENSG00000250328.4 MGC32805 chr5 122436497 122479087 - antisense NOVEL OTTHUMG00000162973.1 42591 2265 15 ENSG00000277169.1 AC022101.1 chr5 122478662 122478729 + miRNA NOVEL NA 68 68 1 ENSG00000251538.4 RP11-166A12.1 chr5 122628952 122730685 - lincRNA NOVEL OTTHUMG00000162984.1 101734 2377 17 ENSG00000224387.1 RP3-395M20.2 chr1 2492300 2493258 - antisense NOVEL OTTHUMG00000000720.1 959 455 2 ENSG00000227453.1 HNRNPA1P63 chr1 54536796 54537758 + processed_pseudogene KNOWN OTTHUMG00000008361.1 963 963 1 ENSG00000240058.3 ARGFXP1 chr5 122675795 122676755 + processed_pseudogene KNOWN OTTHUMG00000159399.3 961 961 1 ENSG00000205302.5 SNX2 chr5 122774996 122830108 + protein_coding KNOWN OTTHUMG00000163020.1 55113 4254 87 ENSG00000212114.1 AC093267.1 chr5 122776431 122776527 - miRNA NOVEL NA 97 97 1 ENSG00000260686.1 CTB-36H16.2 chr5 122832356 122834533 + sense_overlapping NOVEL OTTHUMG00000173460.1 2178 2178 1 ENSG00000064652.9 SNX24 chr5 122843439 123029354 + protein_coding KNOWN OTTHUMG00000128913.2 185916 3550 72 ENSG00000263432.2 RN7SL689P chr5 123022487 123022783 - misc_RNA KNOWN NA 297 297 1 ENSG00000168938.5 PPIC chr5 123023250 123036741 - protein_coding KNOWN OTTHUMG00000128921.2 13492 2098 7 ENSG00000249996.1 RP11-359P5.1 chr5 123036271 123054667 + antisense NOVEL OTTHUMG00000162982.1 18397 561 2 ENSG00000276047.1 Metazoa_SRP chr5 123070782 123071080 + misc_RNA NOVEL NA 299 299 1 ENSG00000223652.2 AC106786.1 chr5 123087248 123090299 - antisense NOVEL OTTHUMG00000150470.2 3052 1020 4 ENSG00000162390.16 ACOT11 chr1 54542257 54639192 + protein_coding KNOWN OTTHUMG00000009891.2 96936 9768 58 ENSG00000061455.10 PRDM6 chr5 123089121 123194266 + protein_coding KNOWN OTTHUMG00000150469.3 105146 9350 16 ENSG00000213655.4 CTD-2347I17.1 chr5 123236079 123236370 + processed_pseudogene KNOWN OTTHUMG00000162983.3 292 292 1 ENSG00000168944.14 CEP120 chr5 123344885 123423592 - protein_coding KNOWN OTTHUMG00000128922.5 78708 6057 135 ENSG00000250539.1 KRT8P33 chr5 123400922 123402344 - processed_pseudogene KNOWN OTTHUMG00000162977.1 1423 1423 1 ENSG00000249400.1 HMGB3P17 chr5 123468781 123469429 - processed_pseudogene KNOWN OTTHUMG00000162975.2 649 649 1 ENSG00000279772.1 CTD-2169H9.1 chr5 123508736 123509187 - TEC KNOWN OTTHUMG00000175452.1 452 452 1 ENSG00000151292.16 CSNK1G3 chr5 123512099 123617045 + protein_coding KNOWN OTTHUMG00000128923.6 104947 5000 93 ENSG00000235275.3 KRT18P16 chr5 123636110 123637403 + processed_pseudogene KNOWN OTTHUMG00000162976.2 1294 1294 1 ENSG00000253807.4 LINC01170 chr5 124059794 124405079 - lincRNA NOVEL OTTHUMG00000163624.2 345286 1011 9 ENSG00000250862.1 HMGB1P29 chr5 124220579 124221077 - processed_pseudogene KNOWN OTTHUMG00000162979.2 499 499 1 ENSG00000162391.10 FAM151A chr1 54609182 54623556 - protein_coding KNOWN OTTHUMG00000009888.2 14375 2005 15 ENSG00000251421.2 CTC-369A16.2 chr5 124395603 124400655 + lincRNA NOVEL OTTHUMG00000163244.2 5053 935 2 ENSG00000248600.1 CTD-2308B18.4 chr5 124455373 124460098 + lincRNA NOVEL OTTHUMG00000163257.1 4726 608 3 ENSG00000251214.1 CTD-2308B18.1 chr5 124459912 124460549 - lincRNA NOVEL OTTHUMG00000162990.1 638 638 1 ENSG00000250438.1 CTD-2308B18.2 chr5 124469591 124469901 + lincRNA NOVEL OTTHUMG00000162993.1 311 311 1 ENSG00000248296.1 CTD-2308B18.3 chr5 124492775 124536348 - lincRNA NOVEL OTTHUMG00000162996.1 43574 797 3 ENSG00000168916.14 ZNF608 chr5 124636913 124748807 - protein_coding KNOWN OTTHUMG00000162999.3 111895 6922 58 ENSG00000249112.1 RP11-43D2.2 chr5 124707827 124710737 + antisense NOVEL OTTHUMG00000162997.2 2911 832 3 ENSG00000251456.1 RP11-436H11.5 chr5 124734618 124735175 - sense_intronic NOVEL OTTHUMG00000163254.1 558 558 1 ENSG00000242814.2 RP11-436H11.1 chr5 124808828 124809233 - processed_pseudogene KNOWN OTTHUMG00000157837.2 406 406 1 ENSG00000248443.1 RP11-284A20.3 chr5 124829472 124830290 + lincRNA NOVEL OTTHUMG00000162998.1 819 819 1 ENSG00000230728.1 RP11-240D10.4 chr1 54621477 54628438 - sense_overlapping NOVEL OTTHUMG00000009889.1 6962 623 2 ENSG00000249261.1 RP11-284A20.2 chr5 124868972 124869914 - lincRNA NOVEL OTTHUMG00000162995.1 943 943 1 ENSG00000249423.1 RP11-284A20.1 chr5 124919947 124921598 + lincRNA NOVEL OTTHUMG00000162992.1 1652 204 2 ENSG00000250411.1 RP11-257I8.2 chr5 125036831 125042239 + lincRNA NOVEL OTTHUMG00000162989.1 5409 118 2 ENSG00000250194.1 RP11-257I8.1 chr5 125074665 125074980 + processed_pseudogene KNOWN OTTHUMG00000162988.1 316 316 1 ENSG00000249365.1 RP11-508M8.1 chr5 125108204 125149929 + lincRNA NOVEL OTTHUMG00000163010.1 41726 451 2 ENSG00000250721.1 HMGB1P22 chr5 125265528 125265651 + processed_pseudogene KNOWN OTTHUMG00000163013.1 124 124 1 ENSG00000274872.1 AC109471.1 chr5 125295409 125295493 + miRNA NOVEL NA 85 85 1 ENSG00000281608.1 RP11-395P13.7 chr5 125325350 125367734 + lincRNA NOVEL OTTHUMG00000190164.1 42385 233 2 ENSG00000222107.1 RN7SKP117 chr5 125350868 125351131 - misc_RNA KNOWN NA 264 264 1 ENSG00000250402.2 RP11-395P13.4 chr5 125376828 125377439 - lincRNA NOVEL OTTHUMG00000163006.2 612 612 1 ENSG00000184313.18 MROH7 chr1 54641754 54710266 + protein_coding KNOWN OTTHUMG00000009890.6 68513 9088 209 ENSG00000260192.1 RP11-756H20.1 chr5 125493261 125602227 + lincRNA NOVEL OTTHUMG00000163260.2 108967 1336 4 ENSG00000249950.1 CTC-394G3.1 chr5 125862746 125863193 - processed_pseudogene KNOWN OTTHUMG00000163007.1 448 448 1 ENSG00000249904.1 CTC-394G3.2 chr5 125886285 125886753 - processed_pseudogene KNOWN OTTHUMG00000163014.1 469 469 1 ENSG00000241888.2 RPSAP37 chr5 125966777 125968085 - processed_pseudogene KNOWN OTTHUMG00000157839.3 1309 821 2 ENSG00000248752.1 RP11-114J13.1 chr5 126076800 126279801 - lincRNA NOVEL OTTHUMG00000163018.1 203002 547 3 ENSG00000248107.1 CTC-339D2.1 chr5 126179577 126193850 + lincRNA NOVEL OTTHUMG00000163017.1 14274 566 4 ENSG00000265637.1 AC010235.1 chr5 126196835 126196915 + miRNA NOVEL NA 81 81 1 ENSG00000155324.8 GRAMD3 chr5 126360132 126496494 + protein_coding KNOWN OTTHUMG00000128943.7 136363 5051 174 ENSG00000250602.4 RP11-517I3.1 chr5 126433505 126490371 - antisense NOVEL OTTHUMG00000163123.1 56867 1689 8 ENSG00000279118.1 RP11-517I3.2 chr5 126496279 126498604 + TEC KNOWN OTTHUMG00000173432.1 2326 2326 1 ENSG00000271723.4 MROH7-TTC4 chr1 54641786 54742308 + protein_coding KNOWN OTTHUMG00000185328.1 100523 7090 116 ENSG00000164904.14 ALDH7A1 chr5 126541841 126595418 - protein_coding KNOWN OTTHUMG00000128942.12 53578 6911 134 ENSG00000164902.12 PHAX chr5 126600268 126627252 + protein_coding KNOWN OTTHUMG00000163273.1 26985 4319 15 ENSG00000230929.5 RP11-395C3.1 chr5 126628019 126628319 - processed_pseudogene KNOWN OTTHUMG00000157841.2 301 301 1 ENSG00000196900.4 TEX43 chr5 126631722 126636287 + protein_coding KNOWN OTTHUMG00000128944.2 4566 476 5 ENSG00000213630.3 BOLA3P3 chr5 126663337 126663568 - processed_pseudogene KNOWN OTTHUMG00000163033.1 232 232 1 ENSG00000249768.2 HSPE1P10 chr5 126737438 126737995 - processed_pseudogene KNOWN OTTHUMG00000163036.2 558 558 1 ENSG00000251072.2 RP11-434D11.4 chr5 126751963 126776486 - lincRNA NOVEL OTTHUMG00000163029.3 24524 914 4 ENSG00000252185.1 RNU6-752P chr5 126755316 126755417 - snRNA KNOWN NA 102 102 1 ENSG00000113368.10 LMNB1 chr5 126776623 126837020 + protein_coding KNOWN OTTHUMG00000128969.6 60398 3633 57 ENSG00000173926.5 MARCH3 chr5 126867714 127030808 - protein_coding KNOWN OTTHUMG00000128968.3 163095 5179 15 ENSG00000243725.5 TTC4 chr1 54715822 54742657 + protein_coding KNOWN OTTHUMG00000009914.3 26836 3527 25 ENSG00000164241.12 C5orf63 chr5 127042558 127073492 - protein_coding KNOWN OTTHUMG00000163037.3 30935 7190 36 ENSG00000279446.1 AC005915.1 chr5 127073587 127075604 + TEC KNOWN OTTHUMG00000173469.1 2018 2018 1 ENSG00000214743.4 MRPS5P3 chr5 127143082 127143247 - processed_pseudogene KNOWN OTTHUMG00000163027.1 166 166 1 ENSG00000250080.1 CTB-88F18.2 chr5 127170535 127172266 - processed_pseudogene KNOWN OTTHUMG00000163025.1 1732 1732 1 ENSG00000271585.1 CTB-88F18.4 chr5 127176696 127177050 - processed_pseudogene KNOWN OTTHUMG00000184309.1 355 355 1 ENSG00000250956.1 CTB-88F18.3 chr5 127179756 127179900 - processed_pseudogene KNOWN OTTHUMG00000163030.1 145 145 1 ENSG00000145794.15 MEGF10 chr5 127290831 127465737 + protein_coding KNOWN OTTHUMG00000128984.3 174907 9007 104 ENSG00000249577.1 CTD-2195M15.1 chr5 127465822 127466118 + processed_pseudogene KNOWN OTTHUMG00000163053.1 297 297 1 ENSG00000271766.1 CTD-2195M15.3 chr5 127478295 127478737 + lincRNA NOVEL OTTHUMG00000185557.1 443 443 1 ENSG00000250859.1 HNRNPKP1 chr5 127511464 127512842 - processed_pseudogene KNOWN OTTHUMG00000163051.1 1379 1379 1 ENSG00000162396.5 PARS2 chr1 54756898 54764514 - protein_coding KNOWN OTTHUMG00000009915.1 7617 2347 2 ENSG00000164244.19 PRRC1 chr5 127517609 127555089 + protein_coding KNOWN OTTHUMG00000128982.5 37481 9064 33 ENSG00000205279.7 CTXN3 chr5 127649044 127658630 + protein_coding KNOWN OTTHUMG00000163285.1 9587 2105 9 ENSG00000248799.1 CTC-548H10.2 chr5 127651693 127664029 - antisense NOVEL OTTHUMG00000163287.1 12337 547 4 ENSG00000230561.3 LINC01183 chr5 127703390 127941634 + lincRNA NOVEL OTTHUMG00000163284.3 238245 1900 11 ENSG00000251032.1 CUL1P1 chr5 127784618 127787042 - processed_pseudogene KNOWN OTTHUMG00000163286.2 2425 2425 1 ENSG00000250603.1 CTC-228N24.2 chr5 127838486 127857804 - lincRNA NOVEL OTTHUMG00000163283.1 19319 388 2 ENSG00000245937.6 LINC01184 chr5 127940426 128083172 - lincRNA NOVEL OTTHUMG00000163312.3 142747 6464 38 ENSG00000064651.12 SLC12A2 chr5 128083766 128189688 + protein_coding KNOWN OTTHUMG00000128983.3 105923 10664 121 ENSG00000250329.1 KDELC1P1 chr5 128109486 128110994 + processed_pseudogene KNOWN OTTHUMG00000163270.1 1509 1509 1 ENSG00000138829.9 FBN2 chr5 128257909 128659185 - protein_coding KNOWN OTTHUMG00000163082.2 401277 13196 275 ENSG00000006555.9 TTC22 chr1 54779712 54801267 - protein_coding KNOWN OTTHUMG00000009916.3 21556 6055 22 ENSG00000207290.1 Y_RNA chr5 128371099 128371212 - misc_RNA NOVEL NA 114 114 1 ENSG00000113396.11 SLC27A6 chr5 128538013 129033642 + protein_coding KNOWN OTTHUMG00000128991.2 495630 3493 39 ENSG00000248634.1 CTC-573M9.1 chr5 128663978 128742829 + sense_intronic NOVEL OTTHUMG00000163145.1 78852 462 2 ENSG00000066583.10 ISOC1 chr5 129094751 129114028 + protein_coding KNOWN OTTHUMG00000163144.1 19278 1940 8 ENSG00000264563.1 MIR4633 chr5 129097688 129097766 + miRNA KNOWN NA 79 79 1 ENSG00000265691.1 MIR4460 chr5 129397062 129397147 - miRNA KNOWN NA 86 86 1 ENSG00000249421.1 ADAMTS19-AS1 chr5 129459559 129460689 - antisense NOVEL OTTHUMG00000163040.1 1131 786 2 ENSG00000145808.7 ADAMTS19 chr5 129460265 129738683 + protein_coding KNOWN OTTHUMG00000128990.2 278419 5408 37 ENSG00000251680.4 CTC-575N7.1 chr5 129500361 129905917 - antisense NOVEL OTTHUMG00000163042.1 405557 881 9 ENSG00000186367.6 KIAA1024L chr5 129748079 129766732 + protein_coding KNOWN OTTHUMG00000163041.2 18654 2354 3 ENSG00000237453.1 RP11-67L3.2 chr1 54792885 54794905 + antisense NOVEL OTTHUMG00000009987.3 2021 343 2 ENSG00000198108.3 CHSY3 chr5 129904472 130186634 + protein_coding KNOWN OTTHUMG00000163043.1 282163 3938 6 ENSG00000221562.1 RNU6ATAC10P chr5 129974891 129975001 + snRNA KNOWN NA 111 111 1 ENSG00000199455.1 RNA5SP191 chr5 130114409 130114510 + rRNA KNOWN NA 102 102 1 ENSG00000248610.1 HSPA8P4 chr5 130140031 130141950 + processed_pseudogene KNOWN OTTHUMG00000163044.1 1920 1920 1 ENSG00000263954.1 AC004769.1 chr5 130277625 130277693 - miRNA NOVEL NA 69 69 1 ENSG00000252514.1 RNU7-53P chr5 130386621 130386680 - snRNA KNOWN NA 60 60 1 ENSG00000249312.1 ARL2BPP4 chr5 130529419 130529889 + processed_pseudogene KNOWN OTTHUMG00000163039.1 471 471 1 ENSG00000249418.2 AC005741.2 chr5 130598348 130598779 + processed_pseudogene KNOWN OTTHUMG00000163038.2 432 432 1 ENSG00000244192.1 RP11-114H7.1 chr5 130989897 130990428 + processed_pseudogene KNOWN OTTHUMG00000157843.1 532 532 1 ENSG00000250405.2 RP11-114H7.2 chr5 130994253 130996164 + processed_pseudogene KNOWN OTTHUMG00000163045.2 1912 1912 1 ENSG00000229393.1 RP3-395M20.3 chr1 2493437 2494479 - antisense NOVEL OTTHUMG00000000721.1 1043 514 2 ENSG00000162398.10 C1orf177 chr1 54806063 54842252 + protein_coding KNOWN OTTHUMG00000009986.2 36190 1777 21 ENSG00000248955.1 RP11-114H7.3 chr5 131008583 131008742 + processed_pseudogene KNOWN OTTHUMG00000163046.1 160 160 1 ENSG00000169567.10 HINT1 chr5 131159027 131171735 - protein_coding KNOWN OTTHUMG00000128995.4 12709 1936 32 ENSG00000186687.14 LYRM7 chr5 131170810 131205426 + protein_coding KNOWN OTTHUMG00000128994.3 34617 6351 14 ENSG00000158985.12 CDC42SE2 chr5 131245493 131398447 + protein_coding KNOWN OTTHUMG00000162692.2 152955 6024 45 ENSG00000279370.1 RP1-247F3.1 chr5 131261321 131261607 - TEC KNOWN OTTHUMG00000162693.1 287 287 1 ENSG00000158987.18 RAPGEF6 chr5 131423921 131635236 - protein_coding KNOWN OTTHUMG00000162683.4 211316 11143 241 ENSG00000273217.1 CTC-432M15.3 chr5 131425891 131796983 - protein_coding KNOWN OTTHUMG00000162686.2 371093 6393 29 ENSG00000281164.1 RAPGEF6 chr5 131427266 131635030 - protein_coding KNOWN NA 207765 4515 28 ENSG00000275939.1 uc_338 chr5 131440031 131440196 - misc_RNA NOVEL NA 166 166 1 ENSG00000217128.10 FNIP1 chr5 131641714 131797063 - protein_coding KNOWN OTTHUMG00000186338.1 155350 7942 85 ENSG00000116133.10 DHCR24 chr1 54849633 54887218 - protein_coding KNOWN OTTHUMG00000009989.1 37586 4250 23 ENSG00000279584.1 AC005593.2 chr5 131797415 131797929 + TEC KNOWN OTTHUMG00000162685.1 515 515 1 ENSG00000164398.11 ACSL6 chr5 131806990 132012243 - protein_coding KNOWN OTTHUMG00000150692.3 205254 14653 292 ENSG00000239642.4 MEIKIN chr5 131807123 131945698 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000059633.5 138576 1992 29 ENSG00000234758.1 AC034228.4 chr5 131944408 131968220 + antisense NOVEL OTTHUMG00000059641.2 23813 562 3 ENSG00000223548.1 AC034228.3 chr5 132003592 132007022 + antisense NOVEL OTTHUMG00000059638.1 3431 923 2 ENSG00000231585.1 AC034228.2 chr5 132011448 132013199 + antisense NOVEL OTTHUMG00000059635.1 1752 459 3 ENSG00000164399.4 IL3 chr5 132060529 132063204 + protein_coding KNOWN OTTHUMG00000059640.1 2676 1050 5 ENSG00000164400.5 CSF2 chr5 132073790 132076170 + protein_coding KNOWN OTTHUMG00000059637.3 2381 787 4 ENSG00000253067.1 snoZ6 chr5 132080066 132080133 + snoRNA NOVEL NA 68 68 1 ENSG00000227616.1 AC063976.1 chr5 132147491 132149559 - unprocessed_pseudogene KNOWN OTTHUMG00000059636.1 2069 329 2 ENSG00000242396.1 RP11-67L3.5 chr1 54886875 54888001 + antisense NOVEL OTTHUMG00000009990.1 1127 575 2 ENSG00000235775.1 AC063976.2 chr5 132163603 132163765 - unprocessed_pseudogene KNOWN OTTHUMG00000059639.1 163 163 1 ENSG00000224015.1 AC063976.3 chr5 132179234 132181128 - lincRNA NOVEL OTTHUMG00000059642.1 1895 381 2 ENSG00000237714.1 P4HA2-AS1 chr5 132184876 132192808 + antisense NOVEL OTTHUMG00000059643.1 7933 839 3 ENSG00000072682.17 P4HA2 chr5 132191838 132295315 - protein_coding KNOWN OTTHUMG00000059647.10 103478 8502 160 ENSG00000224431.1 AC063976.7 chr5 132199456 132203487 + processed_pseudogene KNOWN OTTHUMG00000099425.1 4032 3556 2 ENSG00000131435.11 PDLIM4 chr5 132257671 132273454 + protein_coding KNOWN OTTHUMG00000059645.6 15784 3192 30 ENSG00000197208.5 SLC22A4 chr5 132294443 132344206 + protein_coding KNOWN OTTHUMG00000059648.6 49764 2688 17 ENSG00000233006.5 AC034220.3 chr5 132311285 132369916 - processed_transcript NOVEL OTTHUMG00000059646.4 58632 2857 17 ENSG00000263597.1 MIR3936 chr5 132365490 132365599 - miRNA KNOWN NA 110 110 1 ENSG00000197375.11 SLC22A5 chr5 132369752 132395614 + protein_coding KNOWN OTTHUMG00000059634.14 25863 12788 59 ENSG00000233203.5 RP11-67L3.4 chr1 54887563 54888850 + antisense NOVEL OTTHUMG00000009988.1 1288 765 9 ENSG00000197536.9 C5orf56 chr5 132410636 132476044 + protein_coding KNOWN OTTHUMG00000059493.5 65409 7217 24 ENSG00000238160.1 AC116366.5 chr5 132419416 132426714 - antisense NOVEL OTTHUMG00000059494.1 7299 999 4 ENSG00000202533.1 Y_RNA chr5 132468147 132468257 + misc_RNA NOVEL NA 111 111 1 ENSG00000234290.2 AC116366.6 chr5 132468890 132473043 - antisense NOVEL OTTHUMG00000059495.2 4154 3730 2 ENSG00000125347.12 IRF1 chr5 132481609 132490798 - protein_coding KNOWN OTTHUMG00000059497.15 9190 7799 64 ENSG00000277192.1 RP11-89G4.1 chr5 132488382 132488702 + antisense NOVEL OTTHUMG00000188148.1 321 321 1 ENSG00000113525.8 IL5 chr5 132541444 132556838 - protein_coding KNOWN OTTHUMG00000059496.4 15395 1587 9 ENSG00000113522.12 RAD50 chr5 132556019 132646344 + protein_coding KNOWN OTTHUMG00000059613.9 90326 9771 101 ENSG00000223442.1 AC004041.2 chr5 132630589 132664272 - antisense NOVEL OTTHUMG00000059612.2 33684 1081 12 ENSG00000169194.8 IL13 chr5 132656263 132661110 + protein_coding KNOWN OTTHUMG00000059723.2 4848 2887 28 ENSG00000143001.4 TMEM61 chr1 54980792 54992293 + protein_coding KNOWN OTTHUMG00000009991.1 11502 1097 3 ENSG00000113520.9 IL4 chr5 132673986 132682676 + protein_coding KNOWN OTTHUMG00000059724.3 8691 818 14 ENSG00000230612.2 AC004237.1 chr5 132688681 132723725 + antisense NOVEL OTTHUMG00000059736.2 35045 1789 10 ENSG00000131437.14 KIF3A chr5 132692628 132737638 - protein_coding KNOWN OTTHUMG00000059725.17 45011 6860 90 ENSG00000205089.6 CCNI2 chr5 132747445 132754403 + protein_coding KNOWN OTTHUMG00000059737.1 6959 3162 16 ENSG00000164402.12 SEPT8 chr5 132750817 132807241 - protein_coding KNOWN OTTHUMG00000059735.13 56425 7711 119 ENSG00000198944.5 SOWAHA chr5 132813587 132816797 + protein_coding KNOWN OTTHUMG00000059844.2 3211 3211 1 ENSG00000272203.1 AC004775.5 chr5 132817248 132818000 - lincRNA NOVEL OTTHUMG00000185560.1 753 753 1 ENSG00000164403.13 SHROOM1 chr5 132822141 132830898 - protein_coding KNOWN OTTHUMG00000059835.3 8758 4420 38 ENSG00000201274.1 RNA5SP192 chr5 132848577 132848696 + rRNA KNOWN NA 120 120 1 ENSG00000164404.7 GDF9 chr5 132861181 132866884 - protein_coding KNOWN OTTHUMG00000059842.3 5704 3279 25 ENSG00000233271.1 RP11-12C17.2 chr1 54980950 54992274 - antisense NOVEL OTTHUMG00000009992.1 11325 428 2 ENSG00000164405.9 UQCRQ chr5 132866560 132868031 + protein_coding KNOWN OTTHUMG00000059836.2 1472 1472 14 ENSG00000164406.7 LEAP2 chr5 132872322 132875046 + protein_coding KNOWN OTTHUMG00000059837.1 2725 2405 8 ENSG00000072364.11 AFF4 chr5 132875379 132963634 - protein_coding KNOWN OTTHUMG00000059838.8 88256 11297 76 ENSG00000235253.1 AC010240.2 chr5 132942932 132945050 + processed_pseudogene KNOWN OTTHUMG00000059841.1 2119 1205 2 ENSG00000202417.1 Y_RNA chr5 132945342 132945454 + misc_RNA NOVEL NA 113 113 1 ENSG00000225364.1 ATP6V0E1P1 chr5 132948493 132948718 + processed_pseudogene KNOWN OTTHUMG00000059840.1 226 226 1 ENSG00000272023.1 CTC-350I8.1 chr5 132963770 132964164 + lincRNA NOVEL OTTHUMG00000185561.1 395 395 1 ENSG00000229738.1 AC010240.3 chr5 132987652 132988110 - processed_pseudogene KNOWN OTTHUMG00000059843.1 459 459 1 ENSG00000199677.1 Y_RNA chr5 132993099 132993200 - misc_RNA NOVEL NA 102 102 1 ENSG00000155329.10 ZCCHC10 chr5 132996985 133026604 - protein_coding KNOWN OTTHUMG00000129013.3 29620 2559 43 ENSG00000162399.6 BSND chr1 54998933 55010883 + protein_coding KNOWN OTTHUMG00000008112.4 11951 3472 4 ENSG00000248648.1 RP11-485M7.1 chr5 133003119 133003365 + processed_pseudogene KNOWN OTTHUMG00000162707.1 247 247 1 ENSG00000170606.12 HSPA4 chr5 133051962 133106449 + protein_coding KNOWN OTTHUMG00000129012.2 54488 5156 72 ENSG00000279691.1 RP11-485M7.2 chr5 133052769 133052971 + TEC KNOWN OTTHUMG00000162708.1 203 203 1 ENSG00000251616.1 RP11-485M7.3 chr5 133111055 133114475 - lincRNA NOVEL OTTHUMG00000162706.1 3421 678 2 ENSG00000248245.1 CTB-49A3.2 chr5 133160438 133224413 + antisense NOVEL OTTHUMG00000162705.2 63976 816 7 ENSG00000240611.1 CTB-49A3.1 chr5 133172218 133173053 - processed_pseudogene KNOWN OTTHUMG00000157845.1 836 836 1 ENSG00000053108.15 FSTL4 chr5 133196455 133612564 - protein_coding KNOWN OTTHUMG00000162729.2 416110 6734 55 ENSG00000249478.1 CTB-49A3.5 chr5 133243764 133248781 + antisense NOVEL OTTHUMG00000162728.1 5018 3279 4 ENSG00000250244.4 CTB-49A3.4 chr5 133256492 133275977 + antisense NOVEL OTTHUMG00000162723.1 19486 416 5 ENSG00000250409.1 CTB-3M24.3 chr5 133387773 133388549 + antisense NOVEL OTTHUMG00000162725.1 777 275 2 ENSG00000169174.10 PCSK9 chr1 55039548 55064852 + protein_coding KNOWN OTTHUMG00000008136.1 25305 4981 20 ENSG00000221287.1 MIR1289-2 chr5 133427596 133427706 - miRNA KNOWN NA 111 111 1 ENSG00000280104.1 CTB-3M24.2 chr5 133457805 133458331 + TEC KNOWN OTTHUMG00000162724.1 527 527 1 ENSG00000273939.1 AC010608.1 chr5 133469005 133469067 - miRNA NOVEL NA 63 63 1 ENSG00000279197.1 CTB-3M24.1 chr5 133574829 133575298 - TEC KNOWN OTTHUMG00000162726.1 470 470 1 ENSG00000251243.1 AC005178.1 chr5 133720495 133720934 - processed_pseudogene KNOWN OTTHUMG00000162727.1 440 440 1 ENSG00000249073.1 CTD-2131I18.1 chr5 133913677 133917269 + lincRNA NOVEL OTTHUMG00000163048.1 3593 683 3 ENSG00000113583.7 C5orf15 chr5 133955502 133968787 - protein_coding KNOWN OTTHUMG00000129125.3 13286 2422 8 ENSG00000213585.9 VDAC1 chr5 133971915 134005133 - protein_coding KNOWN OTTHUMG00000129118.3 33219 3163 46 ENSG00000271737.1 CTB-113I20.2 chr5 134005147 134005562 + lincRNA NOVEL OTTHUMG00000185563.1 416 416 1 ENSG00000271128.1 CTB-113I20.1 chr5 134081914 134082040 - processed_pseudogene KNOWN OTTHUMG00000184312.1 127 127 1 ENSG00000162402.11 USP24 chr1 55066359 55215113 - protein_coding KNOWN OTTHUMG00000008135.4 148755 11708 86 ENSG00000081059.18 TCF7 chr5 134114711 134151865 + protein_coding KNOWN OTTHUMG00000129124.3 37155 10063 150 ENSG00000113558.17 SKP1 chr5 134148935 134177038 - protein_coding KNOWN OTTHUMG00000129117.5 28104 12771 67 ENSG00000272772.1 CTD-2410N18.5 chr5 134167170 134226071 - protein_coding PUTATIVE OTTHUMG00000186510.1 58902 483 3 ENSG00000113575.8 PPP2CA chr5 134194334 134226142 - protein_coding KNOWN OTTHUMG00000129119.4 31809 5661 21 ENSG00000273345.4 CTD-2410N18.4 chr5 134205614 134371044 - processed_transcript NOVEL OTTHUMG00000164185.1 165431 1745 17 ENSG00000266751.1 MIR3661 chr5 134225757 134225852 + miRNA KNOWN NA 96 96 1 ENSG00000270177.1 CTD-2410N18.3 chr5 134226410 134227827 + lincRNA NOVEL OTTHUMG00000184010.1 1418 1418 1 ENSG00000239615.1 CTD-2410N18.1 chr5 134267421 134267856 + processed_pseudogene KNOWN OTTHUMG00000157848.1 436 436 1 ENSG00000006837.10 CDKL3 chr5 134286350 134371047 - protein_coding KNOWN OTTHUMG00000186341.2 84698 3057 80 ENSG00000119048.6 UBE2B chr5 134371179 134391992 + protein_coding KNOWN OTTHUMG00000129120.2 20814 3291 33 ENSG00000231090.1 RP11-101C11.1 chr1 55217861 55234177 + lincRNA NOVEL OTTHUMG00000008214.1 16317 638 2 ENSG00000279469.1 RP11-215P8.2 chr5 134394360 134395008 - TEC KNOWN OTTHUMG00000163067.1 649 649 1 ENSG00000248559.1 RP11-215P8.3 chr5 134399495 134401921 + antisense NOVEL OTTHUMG00000163068.1 2427 520 2 ENSG00000237190.3 CDKN2AIPNL chr5 134402087 134411898 - protein_coding KNOWN OTTHUMG00000129123.2 9812 1757 5 ENSG00000243648.1 RP11-215P8.1 chr5 134422838 134423335 + processed_pseudogene KNOWN OTTHUMG00000157849.1 498 498 1 ENSG00000250564.1 RP11-215P8.4 chr5 134429051 134460615 - lincRNA NOVEL OTTHUMG00000163076.1 31565 669 3 ENSG00000250994.1 AC005355.1 chr5 134436711 134492519 + lincRNA NOVEL OTTHUMG00000163069.1 55809 714 2 ENSG00000207222.1 RNU6-456P chr5 134500178 134500284 - snRNA KNOWN NA 107 107 1 ENSG00000251169.2 AC005355.2 chr5 134506552 134509229 + lincRNA NOVEL OTTHUMG00000163059.2 2678 1107 2 ENSG00000240250.3 RN7SL541P chr5 134517810 134518092 + misc_RNA KNOWN NA 283 283 1 ENSG00000280420.1 AC005355.3 chr5 134522613 134523096 - TEC KNOWN OTTHUMG00000163058.1 484 484 1 ENSG00000157881.12 PANK4 chr1 2508533 2526600 - protein_coding KNOWN OTTHUMG00000000791.3 18068 5079 90 ENSG00000231095.1 GYG1P3 chr1 55222379 55223372 + processed_pseudogene KNOWN OTTHUMG00000008215.1 994 994 1 ENSG00000043143.19 JADE2 chr5 134524312 134583230 + protein_coding KNOWN OTTHUMG00000129122.4 58919 9877 72 ENSG00000152700.12 SAR1B chr5 134601144 134649271 - protein_coding KNOWN OTTHUMG00000129114.2 48128 10963 64 ENSG00000207459.1 RNU6-1311P chr5 134634839 134634945 - snRNA KNOWN NA 107 107 1 ENSG00000113615.11 SEC24A chr5 134648789 134727823 + protein_coding KNOWN OTTHUMG00000163064.1 79035 7201 41 ENSG00000201298.1 RNU6-1164P chr5 134701172 134701278 - snRNA KNOWN NA 107 107 1 ENSG00000222266.1 RNU6-757P chr5 134715483 134715582 + snRNA KNOWN NA 100 100 1 ENSG00000164615.4 CAMLG chr5 134738501 134752160 + protein_coding KNOWN OTTHUMG00000129116.3 13660 2221 7 ENSG00000145833.14 DDX46 chr5 134758771 134855133 + protein_coding KNOWN OTTHUMG00000163072.1 96363 9222 119 ENSG00000241179.1 CTB-2L9.1 chr5 134804778 134805132 - processed_pseudogene KNOWN OTTHUMG00000157852.1 355 355 1 ENSG00000181904.8 C5orf24 chr5 134845680 134859737 + protein_coding KNOWN OTTHUMG00000129121.2 14058 5741 14 ENSG00000265822.1 MIR4422 chr1 55225641 55225723 + miRNA KNOWN NA 83 83 1 ENSG00000270892.1 AC006077.4 chr5 134863091 134863433 - processed_pseudogene KNOWN OTTHUMG00000184320.1 343 343 1 ENSG00000113621.13 TXNDC15 chr5 134873803 134901525 + protein_coding KNOWN OTTHUMG00000129115.3 27723 5265 34 ENSG00000132570.13 PCBD2 chr5 134904906 135007959 + protein_coding KNOWN OTTHUMG00000163070.1 103054 7171 20 ENSG00000279799.1 AC006077.3 chr5 134905235 134905691 + TEC KNOWN OTTHUMG00000163060.1 457 457 1 ENSG00000244921.2 CTB-36O1.7 chr5 134923303 134924049 - processed_pseudogene KNOWN OTTHUMG00000163073.1 747 747 1 ENSG00000249119.1 MTND6P4 chr5 134924123 134924644 + processed_pseudogene KNOWN OTTHUMG00000163065.1 522 522 1 ENSG00000248923.1 MTND5P11 chr5 134924648 134926459 - processed_pseudogene KNOWN OTTHUMG00000163063.1 1812 1812 1 ENSG00000247627.2 MTND4P12 chr5 134926660 134928036 - processed_pseudogene KNOWN OTTHUMG00000163066.1 1377 1377 1 ENSG00000198868.3 CTB-36O1.4 chr5 134928030 134928326 - processed_pseudogene KNOWN OTTHUMG00000163074.1 297 297 1 ENSG00000263963.1 MIR4461 chr5 134928039 134928112 + miRNA KNOWN NA 74 74 1 ENSG00000231900.3 GOT2P1 chr1 55367466 55368774 + processed_pseudogene KNOWN OTTHUMG00000008216.2 1309 1309 1 ENSG00000249192.1 CTB-36O1.3 chr5 134928393 134928527 - processed_pseudogene KNOWN OTTHUMG00000163071.1 135 135 1 ENSG00000152705.7 CATSPER3 chr5 134967906 135011707 + protein_coding KNOWN OTTHUMG00000129137.3 43802 1581 11 ENSG00000069011.14 PITX1 chr5 135027735 135034813 - protein_coding KNOWN OTTHUMG00000149983.4 7079 3511 18 ENSG00000224186.7 C5orf66 chr5 135033280 135358219 + antisense KNOWN OTTHUMG00000163075.3 324940 6650 24 ENSG00000277619.1 CTC-276P9.4 chr5 135034521 135035894 + antisense NOVEL OTTHUMG00000187902.1 1374 1374 1 ENSG00000249082.2 C5orf66-AS1 chr5 135038831 135040047 - lincRNA NOVEL OTTHUMG00000163077.2 1217 843 4 ENSG00000248753.1 CTC-276P9.2 chr5 135120526 135139681 + lincRNA NOVEL OTTHUMG00000163062.1 19156 532 3 ENSG00000248482.1 CTC-276P9.3 chr5 135124380 135131249 - lincRNA NOVEL OTTHUMG00000163061.1 6870 541 2 ENSG00000249647.2 C5orf66-AS2 chr5 135236234 135248179 - lincRNA NOVEL OTTHUMG00000163309.2 11946 2451 6 ENSG00000113648.15 H2AFY chr5 135333900 135399914 - protein_coding KNOWN OTTHUMG00000129141.3 66015 17730 106 ENSG00000232198.2 RP4-633H17.2 chr1 55372710 55373316 - processed_pseudogene KNOWN OTTHUMG00000008213.2 607 607 1 ENSG00000270021.1 CTC-203F4.2 chr5 135399280 135401296 + antisense NOVEL OTTHUMG00000171136.2 2017 2017 1 ENSG00000251380.3 DCANP1 chr5 135444214 135447348 - protein_coding KNOWN OTTHUMG00000163308.1 3135 3135 1 ENSG00000255833.1 TIFAB chr5 135444218 135452399 - protein_coding KNOWN OTTHUMG00000129140.2 8182 5923 2 ENSG00000249639.1 CTB-138E5.1 chr5 135450613 135458697 + antisense NOVEL OTTHUMG00000163110.1 8085 504 2 ENSG00000181965.5 NEUROG1 chr5 135534282 135535949 - protein_coding KNOWN OTTHUMG00000129138.1 1668 1668 1 ENSG00000250167.1 CTC-321K16.1 chr5 135559577 135634874 + antisense NOVEL OTTHUMG00000163105.2 75298 887 7 ENSG00000145824.11 CXCL14 chr5 135570679 135579279 - protein_coding KNOWN OTTHUMG00000129139.4 8601 1975 8 ENSG00000251045.1 CTC-321K16.4 chr5 135648584 135653935 - lincRNA NOVEL OTTHUMG00000163111.2 5352 2141 3 ENSG00000238393.1 AC009009.1 chr5 135713119 135713216 - miRNA NOVEL NA 98 98 1 ENSG00000223539.4 AC011431.1 chr5 135742462 135746356 - unprocessed_pseudogene KNOWN OTTHUMG00000163108.2 3895 230 2 ENSG00000199831.1 RN7SKP291 chr1 55376526 55376852 - misc_RNA KNOWN NA 327 327 1 ENSG00000263840.1 AC011431.2 chr5 135801229 135801314 - miRNA NOVEL NA 86 86 1 ENSG00000265924.1 MIR5692C1 chr5 135802985 135803075 - miRNA KNOWN NA 91 91 1 ENSG00000264039.1 AC114296.1 chr5 135804505 135804593 - miRNA NOVEL NA 89 89 1 ENSG00000250378.1 RP11-119J18.1 chr5 135812667 135826582 + lincRNA NOVEL OTTHUMG00000163102.2 13916 377 2 ENSG00000145832.11 SLC25A48 chr5 135834649 135888637 + protein_coding KNOWN OTTHUMG00000157007.3 53989 4966 30 ENSG00000145839.1 IL9 chr5 135892246 135895827 - protein_coding KNOWN OTTHUMG00000129147.1 3582 591 5 ENSG00000254239.1 GS1-39E22.2 chr5 135897637 135900250 + lincRNA NOVEL OTTHUMG00000165055.2 2614 414 2 ENSG00000253927.1 GS1-39E22.1 chr5 135900353 135918161 - lincRNA NOVEL OTTHUMG00000165056.1 17809 771 5 ENSG00000145826.7 LECT2 chr5 135922279 135955034 - protein_coding KNOWN OTTHUMG00000129146.4 32756 2175 18 ENSG00000164616.13 FBXL21 chr5 135930317 135951591 + polymorphic_pseudogene KNOWN OTTHUMG00000155971.3 21275 3008 41 ENSG00000252162.1 RNU6-830P chr1 55398514 55398620 + snRNA KNOWN NA 107 107 1 ENSG00000120708.15 TGFBI chr5 136028895 136063818 + protein_coding KNOWN OTTHUMG00000163213.3 34924 7810 106 ENSG00000270123.3 VTRNA2-1 chr5 136080471 136080597 - vaultRNA KNOWN OTTHUMG00000183992.1 127 127 1 ENSG00000278815.1 VTRNA2-1 chr5 136080497 136080597 - misc_RNA KNOWN NA 101 101 1 ENSG00000164621.5 SMAD5-AS1 chr5 136129507 136134890 - antisense KNOWN OTTHUMG00000163216.1 5384 1816 2 ENSG00000277859.1 SMAD5-AS1_1 chr5 136129516 136129781 + misc_RNA NOVEL NA 266 266 1 ENSG00000113658.15 SMAD5 chr5 136132845 136188747 + protein_coding KNOWN OTTHUMG00000163212.5 55903 8779 45 ENSG00000275646.1 SMAD5-AS1_2 chr5 136133696 136133826 + misc_RNA NOVEL NA 131 131 1 ENSG00000277524.1 SMAD5-AS1_3 chr5 136133912 136134035 + misc_RNA NOVEL NA 124 124 1 ENSG00000274934.1 SMAD5-AS1_4 chr5 136134082 136134248 + misc_RNA NOVEL NA 167 167 1 ENSG00000271824.1 AC009014.3 chr5 136191468 136193134 - lincRNA NOVEL OTTHUMG00000185564.1 1667 1667 1 ENSG00000272051.1 Y_RNA chr1 55484871 55484972 - misc_RNA NOVEL NA 102 102 1 ENSG00000069018.16 TRPC7 chr5 136213320 136365537 - protein_coding KNOWN OTTHUMG00000189265.1 152218 3185 69 ENSG00000248211.1 TRPC7-AS1 chr5 136214048 136222159 + antisense NOVEL OTTHUMG00000162034.1 8112 460 2 ENSG00000250947.1 TRPC7-AS2 chr5 136303757 136316100 + antisense NOVEL OTTHUMG00000162036.1 12344 706 3 ENSG00000279240.1 AC063980.3 chr5 136376348 136397042 - lincRNA NOVEL OTTHUMG00000162035.4 20695 414 2 ENSG00000248351.1 HSPD1P18 chr5 136381268 136381511 - processed_pseudogene KNOWN OTTHUMG00000163218.1 244 244 1 ENSG00000213568.4 HNRNPA1P13 chr5 136428892 136429854 + processed_pseudogene KNOWN OTTHUMG00000163217.1 963 963 1 ENSG00000249803.4 RP11-114H21.2 chr5 136466677 136520298 + lincRNA NOVEL OTTHUMG00000163214.1 53622 800 6 ENSG00000250284.1 CTB-1I21.1 chr5 136734927 136754686 + lincRNA NOVEL OTTHUMG00000163215.1 19760 564 3 ENSG00000248616.1 CTB-1I21.2 chr5 136857628 136858342 + processed_pseudogene KNOWN OTTHUMG00000163219.2 715 715 1 ENSG00000222285.1 RNA5SP193 chr5 136969200 136969306 - rRNA KNOWN NA 107 107 1 ENSG00000234810.1 RP11-466L17.1 chr1 55581037 55735002 + lincRNA NOVEL OTTHUMG00000008246.1 153966 4063 3 ENSG00000152377.11 SPOCK1 chr5 136975298 137598379 - protein_coding KNOWN OTTHUMG00000129157.4 623082 6174 51 ENSG00000221612.1 AC106775.1 chr5 137533454 137533521 + miRNA NOVEL NA 68 68 1 ENSG00000146021.13 KLHL3 chr5 137617500 137736090 - protein_coding KNOWN OTTHUMG00000129155.13 118591 11854 103 ENSG00000216009.2 MIR874 chr5 137647562 137647673 - miRNA KNOWN NA 112 112 1 ENSG00000177733.6 HNRNPA0 chr5 137745651 137754376 - protein_coding KNOWN OTTHUMG00000129156.2 8726 8726 1 ENSG00000270697.1 RP11-381K20.4 chr5 137761546 137761936 + lincRNA NOVEL OTTHUMG00000184240.1 391 391 1 ENSG00000226306.6 NPY6R chr5 137801193 137810751 + transcribed_processed_pseudogene KNOWN OTTHUMG00000163236.2 9559 2988 3 ENSG00000250159.5 RP11-381K20.2 chr5 137814333 137889336 - antisense NOVEL OTTHUMG00000163307.2 75004 1675 8 ENSG00000120729.8 MYOT chr5 137867791 137887851 + protein_coding KNOWN OTTHUMG00000129154.5 20061 2893 48 ENSG00000078795.15 PKD2L2 chr5 137887968 137942747 + protein_coding KNOWN OTTHUMG00000163306.3 54780 4653 73 ENSG00000233147.1 RP11-90C4.1 chr1 55823807 55868248 + lincRNA NOVEL OTTHUMG00000008243.2 44442 645 5 ENSG00000031003.9 FAM13B chr5 137937960 138051961 - protein_coding KNOWN OTTHUMG00000129202.7 114002 6808 96 ENSG00000277843.1 AC106753.1 chr5 137966337 137966444 + miRNA NOVEL NA 108 108 1 ENSG00000246323.2 RP11-325L7.1 chr5 138032774 138037266 + antisense NOVEL OTTHUMG00000163222.1 4493 1253 2 ENSG00000250260.1 RP11-325L7.2 chr5 138039199 138039979 + lincRNA NOVEL OTTHUMG00000163223.1 781 646 2 ENSG00000222924.1 RNU6-1148P chr5 138069355 138069458 - snRNA KNOWN NA 104 104 1 ENSG00000061492.10 WNT8A chr5 138083892 138092365 + protein_coding KNOWN OTTHUMG00000129196.5 8474 2089 25 ENSG00000112981.4 NME5 chr5 138115172 138139443 - protein_coding KNOWN OTTHUMG00000129207.3 24272 2392 18 ENSG00000212460.1 RNU6-460P chr5 138116573 138116680 + snRNA KNOWN NA 108 108 1 ENSG00000199880.1 RNU6-888P chr5 138123011 138123111 - snRNA KNOWN NA 101 101 1 ENSG00000112983.16 BRD8 chr5 138139766 138178986 - protein_coding KNOWN OTTHUMG00000129204.6 39221 7046 267 ENSG00000230250.1 RP11-90C4.2 chr1 55915609 55944963 - lincRNA NOVEL OTTHUMG00000008244.1 29355 631 3 ENSG00000112984.10 KIF20A chr5 138178719 138187715 + protein_coding KNOWN OTTHUMG00000129195.2 8997 3958 62 ENSG00000094880.9 CDC23 chr5 138187648 138213343 - protein_coding KNOWN OTTHUMG00000129198.5 25696 4618 51 ENSG00000146013.9 GFRA3 chr5 138252379 138274671 - protein_coding KNOWN OTTHUMG00000129200.2 22293 2039 15 ENSG00000249851.1 RP11-166J22.1 chr5 138266996 138267757 - processed_pseudogene KNOWN OTTHUMG00000163470.1 762 459 2 ENSG00000158402.17 CDC25C chr5 138285265 138338355 - protein_coding KNOWN OTTHUMG00000129203.2 53091 3047 85 ENSG00000120709.9 FAM53C chr5 138331935 138349729 + protein_coding KNOWN OTTHUMG00000129201.3 17795 7051 43 ENSG00000249971.1 RP11-256P1.1 chr5 138347027 138349641 - antisense NOVEL OTTHUMG00000163471.1 2615 411 2 ENSG00000120733.12 KDM3B chr5 138352596 138437028 + protein_coding KNOWN OTTHUMG00000163469.1 84433 7961 97 ENSG00000132563.14 REEP2 chr5 138439017 138446969 + protein_coding KNOWN OTTHUMG00000129205.4 7953 3284 64 ENSG00000271196.1 RP11-461O14.3 chr5 138454540 138454732 - processed_pseudogene KNOWN OTTHUMG00000184358.1 193 193 1 ENSG00000197921.5 HES5 chr1 2528745 2530245 - protein_coding KNOWN OTTHUMG00000000793.1 1501 1306 3 ENSG00000227104.3 PIGQP1 chr1 55938714 55939280 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000129005.3 567 430 2 ENSG00000120738.7 EGR1 chr5 138465490 138469315 + protein_coding KNOWN OTTHUMG00000129197.2 3826 3138 2 ENSG00000241458.1 RPL7P19 chr5 138473744 138474361 + processed_pseudogene KNOWN OTTHUMG00000157864.1 618 618 1 ENSG00000120705.11 ETF1 chr5 138506095 138543300 - protein_coding KNOWN OTTHUMG00000129199.4 37206 4601 61 ENSG00000278947.1 AC011385.1 chr5 138552161 138552361 + pseudogene NOVEL NA 201 195 3 ENSG00000113013.11 HSPA9 chr5 138554882 138575444 - protein_coding KNOWN OTTHUMG00000129206.3 20563 4751 78 ENSG00000222937.1 SNORD63 chr5 138558970 138559039 - snoRNA NOVEL NA 70 70 1 ENSG00000206989.1 SNORD63 chr5 138561043 138561110 - snoRNA KNOWN NA 68 68 1 ENSG00000044115.19 CTNNA1 chr5 138610967 138935034 + protein_coding KNOWN OTTHUMG00000163502.3 324068 8830 259 ENSG00000232174.3 CTB-164L20.1 chr5 138620329 138620964 + processed_pseudogene KNOWN OTTHUMG00000157865.1 636 636 1 ENSG00000238745.1 snoU13 chr5 138623479 138623582 + snoRNA NOVEL NA 104 104 1 ENSG00000233079.1 RP11-90C4.3 chr1 55945087 55950119 + lincRNA NOVEL OTTHUMG00000008245.1 5033 453 2 ENSG00000253404.1 AC034243.1 chr5 138744434 138753309 - antisense NOVEL OTTHUMG00000163503.1 8876 587 2 ENSG00000146006.7 LRRTM2 chr5 138868923 138875368 - protein_coding KNOWN OTTHUMG00000163535.3 6446 6095 8 ENSG00000120725.11 SIL1 chr5 138946720 139293557 - protein_coding KNOWN OTTHUMG00000129226.2 346838 4011 88 ENSG00000201532.1 RNA5SP194 chr5 139012329 139012441 + rRNA KNOWN NA 113 113 1 ENSG00000249593.5 CTB-46B19.2 chr5 139012647 139051203 + antisense NOVEL OTTHUMG00000163387.2 38557 2380 12 ENSG00000242683.1 CTB-46B19.1 chr5 139035148 139035987 - processed_pseudogene KNOWN OTTHUMG00000157868.1 840 518 3 ENSG00000252533.1 RNU6-572P chr5 139221758 139221837 + snRNA KNOWN NA 80 80 1 ENSG00000280987.1 MATR3 chr5 139273752 139331677 + protein_coding NOVEL OTTHUMG00000189583.1 57926 6640 144 ENSG00000281398.1 SNHG4 chr5 139274102 139283244 + processed_transcript KNOWN OTTHUMG00000189582.1 9143 1926 42 ENSG00000252213.1 SNORA74 chr5 139276180 139276320 + snoRNA NOVEL NA 141 141 1 ENSG00000235612.1 RP1-158P9.1 chr1 56145721 56155224 + lincRNA NOVEL OTTHUMG00000008126.2 9504 731 3 ENSG00000200959.1 SNORA74A chr5 139278781 139278978 + snoRNA KNOWN NA 198 198 1 ENSG00000281220.1 AC011404.1 chr5 139278883 139279015 + miRNA NOVEL NA 133 133 1 ENSG00000015479.16 MATR3 chr5 139293648 139331359 + protein_coding KNOWN OTTHUMG00000129229.4 37712 11772 168 ENSG00000199545.1 RNA5SP195 chr5 139299852 139299968 + rRNA KNOWN NA 117 117 1 ENSG00000253015.1 RN7SKP64 chr5 139333038 139333365 - misc_RNA KNOWN NA 328 328 1 ENSG00000120727.11 PAIP2 chr5 139341587 139369720 + protein_coding KNOWN OTTHUMG00000129227.4 28134 3158 28 ENSG00000272742.1 CTB-43P18.1 chr5 139364677 139369717 - antisense NOVEL OTTHUMG00000186242.1 5041 664 2 ENSG00000170482.15 SLC23A1 chr5 139367196 139384553 - protein_coding KNOWN OTTHUMG00000129228.4 17358 3203 47 ENSG00000170476.14 MZB1 chr5 139387480 139390081 - protein_coding KNOWN OTTHUMG00000163390.1 2602 2273 27 ENSG00000228672.3 PROB1 chr5 139390592 139395713 - protein_coding KNOWN OTTHUMG00000185568.1 5122 5122 1 ENSG00000229871.1 RP4-710M16.1 chr1 56207567 56208456 - processed_pseudogene KNOWN OTTHUMG00000008127.2 890 890 1 ENSG00000170469.9 SPATA24 chr5 139396563 139404088 - protein_coding KNOWN OTTHUMG00000163388.2 7526 1204 33 ENSG00000170464.8 DNAJC18 chr5 139408588 139444491 - protein_coding KNOWN OTTHUMG00000129225.4 35904 6499 58 ENSG00000279686.1 ECSCR chr5 139442316 139462707 - protein_coding NOVEL OTTHUMG00000189234.1 20392 1002 12 ENSG00000200378.1 RNU5B-4P chr5 139447907 139448017 + snRNA KNOWN NA 111 111 1 ENSG00000249751.3 ECSCR chr5 139448556 139462743 - protein_coding KNOWN OTTHUMG00000163240.3 14188 1035 10 ENSG00000184584.11 TMEM173 chr5 139475534 139482935 - protein_coding KNOWN OTTHUMG00000129239.8 7402 3850 66 ENSG00000249689.1 AC138517.5 chr5 139492538 139493105 + processed_pseudogene KNOWN OTTHUMG00000163241.1 568 568 1 ENSG00000249215.1 AC138517.4 chr5 139494256 139496116 + processed_pseudogene KNOWN OTTHUMG00000163242.1 1861 1861 1 ENSG00000131508.14 UBE2D2 chr5 139526431 139628433 + protein_coding KNOWN OTTHUMG00000163282.4 102003 3556 51 ENSG00000207020.1 Y_RNA chr5 139554900 139555001 - misc_RNA NOVEL NA 102 102 1 ENSG00000260971.3 RP11-504A18.1 chr1 56248294 56258571 - lincRNA NOVEL OTTHUMG00000175839.3 10278 1351 3 ENSG00000275506.1 CTD-2062A1.2 chr5 139612002 139612363 - processed_pseudogene KNOWN OTTHUMG00000187602.1 362 362 1 ENSG00000272255.1 CTD-3224K15.3 chr5 139644460 139645002 - lincRNA NOVEL OTTHUMG00000185579.1 543 543 1 ENSG00000171604.10 CXXC5 chr5 139647299 139683882 + protein_coding KNOWN OTTHUMG00000163331.3 36584 3852 38 ENSG00000250635.1 CTD-3224K15.2 chr5 139648999 139649728 - lincRNA NOVEL OTTHUMG00000163330.1 730 577 2 ENSG00000249526.1 CTB-35F21.1 chr5 139684645 139745010 + lincRNA NOVEL OTTHUMG00000163333.1 60366 568 6 ENSG00000200756.1 RNU6-236P chr5 139717985 139718090 - snRNA KNOWN NA 106 106 1 ENSG00000249131.1 CTB-35F21.2 chr5 139741349 139746223 - lincRNA NOVEL OTTHUMG00000163335.2 4875 412 3 ENSG00000251387.1 CTB-35F21.3 chr5 139772528 139775406 - lincRNA NOVEL OTTHUMG00000163334.1 2879 553 2 ENSG00000271792.1 CTB-35F21.5 chr5 139775305 139775472 + lincRNA NOVEL OTTHUMG00000185580.1 168 168 1 ENSG00000146005.3 PSD2 chr5 139795821 139844466 + protein_coding KNOWN OTTHUMG00000129240.1 48646 4513 15 ENSG00000223307.2 AC119674.1 chr1 56377333 56377418 - miRNA NOVEL NA 86 86 1 ENSG00000158458.18 NRG2 chr5 139846779 140043299 - protein_coding KNOWN OTTHUMG00000129241.6 196521 4520 78 ENSG00000250692.1 CTB-35F21.4 chr5 139848290 139856389 + antisense NOVEL OTTHUMG00000163348.1 8100 469 3 ENSG00000207317.1 Y_RNA chr5 140019492 140019592 + misc_RNA NOVEL NA 101 101 1 ENSG00000245146.5 LINC01024 chr5 140072857 140108630 - antisense NOVEL OTTHUMG00000163537.2 35774 3439 21 ENSG00000185129.5 PURA chr5 140107777 140125619 + protein_coding KNOWN OTTHUMG00000129242.3 17843 12185 5 ENSG00000182700.4 IGIP chr5 140125935 140129392 + protein_coding KNOWN OTTHUMG00000163359.1 3458 3458 1 ENSG00000254363.5 CTB-131B5.5 chr5 140157319 140173051 + processed_transcript NOVEL OTTHUMG00000163536.2 15733 6140 8 ENSG00000120306.8 CYSTM1 chr5 140174642 140282052 + protein_coding KNOWN OTTHUMG00000129243.4 107411 2185 14 ENSG00000264890.1 AC011379.1 chr5 140195702 140195791 - miRNA NOVEL NA 90 90 1 ENSG00000250069.1 CTB-131B5.2 chr5 140200163 140203187 + sense_intronic NOVEL OTTHUMG00000163412.1 3025 3025 1 ENSG00000223956.1 RP4-710M16.2 chr1 56414963 56415966 + lincRNA NOVEL OTTHUMG00000008128.1 1004 545 4 ENSG00000113068.8 PFDN1 chr5 140245039 140303121 - protein_coding KNOWN OTTHUMG00000129249.4 58083 2156 22 ENSG00000281227.1 AC011380.1 chr5 140287313 140289276 + protein_coding NOVEL NA 1964 48 3 ENSG00000113070.7 HBEGF chr5 140332843 140346631 - protein_coding KNOWN OTTHUMG00000129496.4 13789 3018 10 ENSG00000253965.1 CTC-329D1.3 chr5 140348484 140357794 - antisense NOVEL OTTHUMG00000163574.1 9311 570 2 ENSG00000113073.13 SLC4A9 chr5 140360202 140375143 + protein_coding KNOWN OTTHUMG00000163352.3 14942 3635 94 ENSG00000249637.1 CTC-329D1.2 chr5 140370891 140401367 - antisense NOVEL OTTHUMG00000163370.1 30477 549 2 ENSG00000222790.1 RNU4-14P chr5 140397323 140397444 - snRNA KNOWN NA 122 122 1 ENSG00000131503.19 ANKHD1 chr5 140401814 140539856 + protein_coding KNOWN OTTHUMG00000161610.2 138043 11124 224 ENSG00000254996.4 ANKHD1-EIF4EBP3 chr5 140401908 140549569 + protein_coding KNOWN OTTHUMG00000166212.1 147662 11385 51 ENSG00000200051.1 SNORD45 chr5 140527352 140527428 - snoRNA NOVEL NA 77 77 1 ENSG00000162407.8 PPAP2B chr1 56494747 56645301 - protein_coding KNOWN OTTHUMG00000008160.2 150555 5286 18 ENSG00000213523.8 SRA1 chr5 140537340 140558310 - protein_coding KNOWN OTTHUMG00000163569.3 20971 3454 23 ENSG00000243056.1 EIF4EBP3 chr5 140547666 140549578 + protein_coding KNOWN OTTHUMG00000129498.2 1913 691 3 ENSG00000113108.16 APBB3 chr5 140558268 140593752 - protein_coding KNOWN OTTHUMG00000129504.5 35485 4784 186 ENSG00000274910.1 MIR6831 chr5 140563671 140563751 - miRNA KNOWN NA 81 81 1 ENSG00000176087.13 SLC35A4 chr5 140564456 140569103 + protein_coding KNOWN OTTHUMG00000129495.4 4648 4023 16 ENSG00000200235.1 SNORA27 chr5 140579667 140579792 + snoRNA NOVEL NA 126 126 1 ENSG00000251453.1 HAUS1P1 chr5 140581504 140582335 + processed_pseudogene KNOWN OTTHUMG00000163364.1 832 832 1 ENSG00000240518.2 RP11-515C16.1 chr5 140609085 140609400 + processed_pseudogene KNOWN OTTHUMG00000157871.2 316 316 1 ENSG00000170458.12 CD14 chr5 140631728 140633701 - protein_coding KNOWN OTTHUMG00000129507.3 1974 1886 14 ENSG00000131495.7 NDUFA2 chr5 140638740 140647785 - protein_coding KNOWN OTTHUMG00000129505.2 9046 1488 10 ENSG00000236776.1 RPL21P23 chr1 56538452 56538911 + processed_pseudogene KNOWN OTTHUMG00000039625.1 460 460 1 ENSG00000113119.11 TMCO6 chr5 140639427 140645408 + protein_coding KNOWN OTTHUMG00000129497.4 5982 3502 81 ENSG00000113141.14 IK chr5 140647058 140662479 + protein_coding KNOWN OTTHUMG00000163374.2 15422 4097 100 ENSG00000264052.1 MIR3655 chr5 140647844 140647926 + miRNA KNOWN NA 83 83 1 ENSG00000120314.17 WDR55 chr5 140664676 140674124 + protein_coding KNOWN OTTHUMG00000129506.4 9449 7675 31 ENSG00000256453.1 DND1 chr5 140670794 140673586 - protein_coding KNOWN OTTHUMG00000129499.2 2793 1605 4 ENSG00000170445.11 HARS chr5 140673173 140692024 - protein_coding KNOWN OTTHUMG00000129502.5 18852 8436 113 ENSG00000112855.13 HARS2 chr5 140691426 140699291 + protein_coding KNOWN OTTHUMG00000129500.3 7866 3409 78 ENSG00000146007.9 ZMAT2 chr5 140698680 140706676 + protein_coding KNOWN OTTHUMG00000129503.7 7997 1812 17 ENSG00000199990.1 VTRNA1-1 chr5 140711275 140711373 + misc_RNA KNOWN NA 99 99 1 ENSG00000202111.1 VTRNA1-2 chr5 140718925 140719013 + misc_RNA KNOWN NA 89 89 1 ENSG00000224980.1 RP11-377K22.3 chr1 56585612 56586242 - processed_pseudogene KNOWN OTTHUMG00000008328.2 631 433 2 ENSG00000202515.1 VTRNA1-3 chr5 140726158 140726246 + misc_RNA KNOWN NA 89 89 1 ENSG00000250515.1 RP11-515C16.7 chr5 140732290 140732863 - processed_pseudogene KNOWN OTTHUMG00000163362.1 574 249 2 ENSG00000248106.2 AC005609.2 chr5 140764110 140764821 + processed_pseudogene KNOWN OTTHUMG00000163361.2 712 712 1 ENSG00000204970.8 PCDHA1 chr5 140786136 141012347 + protein_coding KNOWN OTTHUMG00000163368.3 226212 5595 9 ENSG00000279726.1 AC005609.16 chr5 140788457 140822193 - antisense NOVEL OTTHUMG00000189135.1 33737 1523 5 ENSG00000204969.6 PCDHA2 chr5 140794852 141012344 + protein_coding KNOWN OTTHUMG00000163363.4 217493 6054 7 ENSG00000255408.3 PCDHA3 chr5 140801028 141012344 + protein_coding KNOWN OTTHUMG00000163357.3 211317 7460 5 ENSG00000204967.9 PCDHA4 chr5 140806929 141012344 + protein_coding KNOWN OTTHUMG00000163360.3 205416 13440 12 ENSG00000204965.7 PCDHA5 chr5 140821604 141012344 + protein_coding KNOWN OTTHUMG00000163367.3 190741 7114 10 ENSG00000081842.16 PCDHA6 chr5 140827958 141012344 + protein_coding KNOWN OTTHUMG00000163353.4 184387 6133 9 ENSG00000272449.1 RP3-395M20.12 chr1 2546465 2547460 + lincRNA NOVEL OTTHUMG00000185639.1 996 996 1 ENSG00000225475.1 RP11-377K22.2 chr1 56619409 56619549 - processed_pseudogene KNOWN OTTHUMG00000008159.2 141 141 1 ENSG00000204963.5 PCDHA7 chr5 140834248 141012344 + protein_coding KNOWN OTTHUMG00000163371.3 178097 5788 5 ENSG00000204962.5 PCDHA8 chr5 140841187 141012344 + protein_coding KNOWN OTTHUMG00000163354.3 171158 5482 5 ENSG00000204961.6 PCDHA9 chr5 140847463 141012344 + protein_coding KNOWN OTTHUMG00000163373.3 164882 10075 5 ENSG00000278907.1 AC005609.19 chr5 140849105 140849696 - antisense NOVEL OTTHUMG00000189136.1 592 592 1 ENSG00000250120.5 PCDHA10 chr5 140855883 141012344 + protein_coding KNOWN OTTHUMG00000163372.3 156462 15224 9 ENSG00000249504.3 PCDHA14 chr5 140861224 140863521 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000163355.4 2298 2298 1 ENSG00000278946.1 AC005609.20 chr5 140867513 140867959 - antisense NOVEL OTTHUMG00000189137.1 447 447 1 ENSG00000249158.5 PCDHA11 chr5 140868183 141012344 + protein_coding KNOWN OTTHUMG00000163369.3 144162 6284 10 ENSG00000251664.3 PCDHA12 chr5 140875302 141012344 + protein_coding KNOWN OTTHUMG00000163366.3 137043 5454 5 ENSG00000278915.1 AC005609.18 chr5 140875346 140875922 - antisense NOVEL OTTHUMG00000189138.1 577 577 1 ENSG00000162409.9 PRKAA2 chr1 56645322 56715335 + protein_coding KNOWN OTTHUMG00000008282.2 70014 9354 19 ENSG00000278901.1 AC005609.17 chr5 140878073 140882642 - antisense NOVEL OTTHUMG00000189139.1 4570 617 2 ENSG00000239389.6 PCDHA13 chr5 140882208 141012344 + protein_coding KNOWN OTTHUMG00000129614.3 130137 5354 10 ENSG00000248383.4 PCDHAC1 chr5 140926369 141012344 + protein_coding KNOWN OTTHUMG00000129603.3 85976 6943 5 ENSG00000279028.1 CTC-270D5.2 chr5 140966212 140966490 - antisense NOVEL OTTHUMG00000189140.1 279 279 1 ENSG00000243232.4 PCDHAC2 chr5 140966235 141012344 + protein_coding KNOWN OTTHUMG00000129607.5 46110 6318 9 ENSG00000279047.2 CTC-270D5.1 chr5 141046260 141096402 - antisense NOVEL OTTHUMG00000189121.1 50143 1698 15 ENSG00000171815.5 PCDHB1 chr5 141051135 141059344 + protein_coding KNOWN OTTHUMG00000129627.5 8210 8210 1 ENSG00000279558.1 CH17-140K24.1 chr5 141078076 141084481 + lincRNA NOVEL OTTHUMG00000189122.1 6406 434 3 ENSG00000112852.6 PCDHB2 chr5 141094578 141098703 + protein_coding KNOWN OTTHUMG00000129606.4 4126 4126 9 ENSG00000272154.3 AC005754.7 chr5 141100242 141174391 - antisense NOVEL OTTHUMG00000185311.2 74150 1059 11 ENSG00000187889.11 C1orf168 chr1 56718804 56819696 - protein_coding KNOWN OTTHUMG00000008281.3 100893 4633 53 ENSG00000113205.4 PCDHB3 chr5 141100473 141152636 + protein_coding KNOWN OTTHUMG00000129622.4 52164 4822 7 ENSG00000272108.1 AC005754.8 chr5 141118680 141120765 + lincRNA NOVEL OTTHUMG00000185595.1 2086 2086 1 ENSG00000081818.3 PCDHB4 chr5 141121799 141125623 + protein_coding KNOWN OTTHUMG00000129617.4 3825 3825 3 ENSG00000113209.8 PCDHB5 chr5 141135218 141138625 + protein_coding KNOWN OTTHUMG00000129616.3 3408 3408 3 ENSG00000280029.2 CH17-140K24.2 chr5 141136683 141245380 - antisense NOVEL OTTHUMG00000189123.3 108698 1528 11 ENSG00000113211.5 PCDHB6 chr5 141150022 141153287 + protein_coding KNOWN OTTHUMG00000129623.5 3266 3266 3 ENSG00000255622.3 PCDHB17P chr5 141155996 141159061 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000187247.3 3066 3066 2 ENSG00000280336.1 CH17-140K24.3 chr5 141168231 141168893 + lincRNA NOVEL OTTHUMG00000189124.1 663 663 1 ENSG00000113212.6 PCDHB7 chr5 141172619 141176383 + protein_coding KNOWN OTTHUMG00000129608.3 3765 3765 1 ENSG00000120322.3 PCDHB8 chr5 141177790 141180529 + protein_coding KNOWN OTTHUMG00000129621.4 2740 2740 1 ENSG00000229913.1 RP11-378I13.1 chr1 56823679 56826920 - antisense NOVEL OTTHUMG00000008327.3 3242 1824 2 ENSG00000279472.1 CH17-140K24.4 chr5 141177849 141182369 + processed_transcript NOVEL OTTHUMG00000189125.1 4521 467 2 ENSG00000272674.3 PCDHB16 chr5 141181399 141186399 + protein_coding KNOWN OTTHUMG00000188325.2 5001 5001 3 ENSG00000279068.1 CH17-140K24.5 chr5 141182409 141188582 + protein_coding NOVEL OTTHUMG00000189126.1 6174 631 5 ENSG00000278936.1 CH17-140K24.7 chr5 141183401 141201396 - antisense NOVEL OTTHUMG00000189127.1 17996 946 4 ENSG00000177839.6 PCDHB9 chr5 141187127 141191541 + protein_coding KNOWN OTTHUMG00000188326.2 4415 4415 5 ENSG00000120324.6 PCDHB10 chr5 141187319 141195642 + protein_coding KNOWN OTTHUMG00000129626.2 8324 3304 3 ENSG00000279375.1 CH17-140K24.6 chr5 141191599 141194088 - antisense NOVEL OTTHUMG00000189128.1 2490 398 2 ENSG00000197479.6 PCDHB11 chr5 141199582 141203779 + protein_coding KNOWN OTTHUMG00000129618.2 4198 4198 3 ENSG00000120328.6 PCDHB12 chr5 141208697 141212571 + protein_coding KNOWN OTTHUMG00000129620.3 3875 3875 5 ENSG00000187372.11 PCDHB13 chr5 141213919 141218979 + protein_coding KNOWN OTTHUMG00000129615.2 5061 5061 1 ENSG00000157131.10 C8A chr1 56854806 56918221 + protein_coding KNOWN OTTHUMG00000008306.1 63416 2356 11 ENSG00000120327.6 PCDHB14 chr5 141222932 141227759 + protein_coding KNOWN OTTHUMG00000129619.4 4828 4828 3 ENSG00000279983.1 CH17-140K24.8 chr5 141223372 141245861 + protein_coding PUTATIVE OTTHUMG00000189134.1 22490 548 2 ENSG00000146001.5 PCDHB18P chr5 141234333 141237529 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000167484.3 3197 3197 4 ENSG00000262096.2 PCDHB19P chr5 141239923 141243034 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000177851.3 3112 3112 2 ENSG00000113248.5 PCDHB15 chr5 141245349 141249365 + protein_coding KNOWN OTTHUMG00000129609.4 4017 4017 3 ENSG00000277795.1 AC005752.10 chr5 141259235 141261364 + processed_pseudogene KNOWN OTTHUMG00000187632.1 2130 1235 3 ENSG00000178913.7 TAF7 chr5 141260225 141320821 - protein_coding KNOWN OTTHUMG00000129628.4 60597 2723 6 ENSG00000120329.6 SLC25A2 chr5 141302629 141304045 - protein_coding KNOWN OTTHUMG00000129604.4 1417 1417 1 ENSG00000272070.1 AC005618.6 chr5 141326210 141329357 + lincRNA NOVEL OTTHUMG00000185596.1 3148 3148 3 ENSG00000204956.5 PCDHGA1 chr5 141330571 141512981 + protein_coding KNOWN OTTHUMG00000163678.4 182411 6252 5 ENSG00000021852.11 C8B chr1 56929210 56966140 - protein_coding KNOWN OTTHUMG00000008305.2 36931 2729 47 ENSG00000081853.14 PCDHGA2 chr5 141338760 141512979 + protein_coding KNOWN OTTHUMG00000163679.3 174220 6724 5 ENSG00000254245.2 PCDHGA3 chr5 141343829 141512979 + protein_coding KNOWN OTTHUMG00000163680.3 169151 4876 10 ENSG00000254221.2 PCDHGB1 chr5 141350102 141512979 + protein_coding KNOWN OTTHUMG00000163681.2 162878 4773 5 ENSG00000280026.1 AC005618.8 chr5 141350109 141350662 - antisense NOVEL OTTHUMG00000189141.1 554 554 1 ENSG00000262576.2 PCDHGA4 chr5 141355025 141512979 + protein_coding KNOWN OTTHUMG00000177593.3 157955 4887 5 ENSG00000253910.2 PCDHGB2 chr5 141360042 141512979 + protein_coding KNOWN OTTHUMG00000163682.2 152938 4769 5 ENSG00000253485.2 PCDHGA5 chr5 141364232 141512979 + protein_coding KNOWN OTTHUMG00000163683.2 148748 5733 5 ENSG00000262209.2 PCDHGB3 chr5 141370264 141512979 + protein_coding KNOWN OTTHUMG00000177471.3 142716 4757 5 ENSG00000253731.2 PCDHGA6 chr5 141373914 141512979 + protein_coding KNOWN OTTHUMG00000163684.2 139066 7910 5 ENSG00000253537.2 PCDHGA7 chr5 141382739 141512979 + protein_coding KNOWN OTTHUMG00000163685.2 130241 5443 5 ENSG00000236341.1 RP5-1103B4.3 chr1 56963886 56996757 + antisense NOVEL OTTHUMG00000056480.1 32872 610 4 ENSG00000253953.2 PCDHGB4 chr5 141387698 141512979 + protein_coding KNOWN OTTHUMG00000163686.2 125282 6906 5 ENSG00000253767.2 PCDHGA8 chr5 141390157 141512979 + protein_coding KNOWN OTTHUMG00000164053.2 122823 8661 5 ENSG00000276547.1 PCDHGB5 chr5 141397987 141512979 + protein_coding KNOWN OTTHUMG00000188231.2 114993 4851 5 ENSG00000261934.2 PCDHGA9 chr5 141402932 141512979 + protein_coding KNOWN OTTHUMG00000177473.2 110048 4749 5 ENSG00000253305.2 PCDHGB6 chr5 141408021 141512979 + protein_coding KNOWN OTTHUMG00000163687.2 104959 6782 5 ENSG00000253846.2 PCDHGA10 chr5 141412987 141512979 + protein_coding KNOWN OTTHUMG00000163688.2 99993 6643 5 ENSG00000254122.2 PCDHGB7 chr5 141417645 141512979 + protein_coding KNOWN OTTHUMG00000164054.2 95335 4966 5 ENSG00000253873.4 PCDHGA11 chr5 141421047 141512979 + protein_coding KNOWN OTTHUMG00000164055.2 91933 5814 9 ENSG00000248449.2 PCDHGB8P chr5 141426286 141429158 + unitary_pseudogene KNOWN OTTHUMG00000154974.2 2873 2873 2 ENSG00000279855.1 AC005618.9 chr5 141427295 141427752 - antisense NOVEL OTTHUMG00000189142.1 458 458 1 ENSG00000221591.1 AL161740.1 chr1 56966280 56966362 + miRNA NOVEL NA 83 83 1 ENSG00000253159.2 PCDHGA12 chr5 141430589 141512979 + protein_coding KNOWN OTTHUMG00000129611.3 82391 4815 5 ENSG00000276545.1 PCDHGB9P chr5 141439853 141442449 + unprocessed_pseudogene KNOWN OTTHUMG00000188233.1 2597 2297 2 ENSG00000273557.1 CTD-2024I7.18 chr5 141468465 141471528 + sense_intronic NOVEL OTTHUMG00000188234.1 3064 335 2 ENSG00000240184.5 PCDHGC3 chr5 141475947 141512979 + protein_coding KNOWN OTTHUMG00000129613.6 37033 5432 25 ENSG00000242020.3 RN7SL68P chr5 141479316 141479625 + misc_RNA KNOWN NA 310 310 1 ENSG00000281646.1 AC008781.1 chr5 141479535 141479617 + miRNA NOVEL NA 83 83 1 ENSG00000242419.4 PCDHGC4 chr5 141484997 141512979 + protein_coding KNOWN OTTHUMG00000129625.2 27983 4974 11 ENSG00000240764.3 PCDHGC5 chr5 141489121 141512979 + protein_coding KNOWN OTTHUMG00000129624.2 23859 4990 5 ENSG00000131504.14 DIAPH1 chr5 141515016 141619055 - protein_coding KNOWN OTTHUMG00000149893.8 104040 7082 178 ENSG00000246422.2 CTD-2024I7.13 chr5 141558311 141565263 + antisense NOVEL OTTHUMG00000164151.1 6953 2480 3 ENSG00000173406.14 DAB1 chr1 56994778 58546734 - protein_coding KNOWN OTTHUMG00000008391.6 1551957 7548 109 ENSG00000240974.1 CTD-2024I7.1 chr5 141588935 141589142 + processed_pseudogene KNOWN OTTHUMG00000157873.1 208 208 1 ENSG00000228737.2 AC008781.7 chr5 141618414 141626481 + antisense NOVEL OTTHUMG00000150501.2 8068 621 3 ENSG00000171720.8 HDAC3 chr5 141620876 141636870 - protein_coding KNOWN OTTHUMG00000129629.4 15995 4631 93 ENSG00000164620.7 RELL2 chr5 141636950 141641077 + protein_coding KNOWN OTTHUMG00000129612.4 4128 2596 44 ENSG00000197948.9 FCHSD1 chr5 141639302 141651419 - protein_coding KNOWN OTTHUMG00000163762.3 12118 6073 94 ENSG00000120318.14 ARAP3 chr5 141653401 141682221 - protein_coding KNOWN OTTHUMG00000129610.5 28821 6186 149 ENSG00000278925.1 AC005753.1 chr5 141825708 141826325 - TEC KNOWN OTTHUMG00000162830.1 618 618 1 ENSG00000156453.12 PCDH1 chr5 141853111 141879246 - protein_coding KNOWN OTTHUMG00000129661.4 26136 5903 25 ENSG00000226040.3 AC005740.3 chr5 141896168 141896689 - processed_pseudogene KNOWN OTTHUMG00000162831.1 522 522 1 ENSG00000081791.7 KIAA0141 chr5 141923808 141942047 + protein_coding KNOWN OTTHUMG00000129662.4 18240 6047 48 ENSG00000227935.1 RP6-102O10.1 chr1 57386576 57387450 + lincRNA NOVEL OTTHUMG00000010108.1 875 708 2 ENSG00000113555.5 PCDH12 chr5 141943585 141969741 - protein_coding KNOWN OTTHUMG00000129658.4 26157 6820 9 ENSG00000271871.1 AC005740.6 chr5 141952419 141953375 + antisense NOVEL OTTHUMG00000185597.1 957 957 1 ENSG00000013561.16 RNF14 chr5 141958328 141990291 + protein_coding KNOWN OTTHUMG00000129660.5 31964 4987 88 ENSG00000254099.1 AC005740.5 chr5 141970637 141982687 - antisense NOVEL OTTHUMG00000165057.1 12051 344 3 ENSG00000113552.14 GNPDA1 chr5 141991749 142013041 - protein_coding KNOWN OTTHUMG00000129657.2 21293 3961 72 ENSG00000250347.1 AC005740.4 chr5 142036707 142037125 - processed_pseudogene KNOWN OTTHUMG00000162832.1 419 419 1 ENSG00000131507.10 NDFIP1 chr5 142108505 142154443 + protein_coding KNOWN OTTHUMG00000129659.4 45939 6024 15 ENSG00000280047.1 CTC-463A16.1 chr5 142165767 142168387 + TEC KNOWN OTTHUMG00000162829.1 2621 2621 1 ENSG00000187678.8 SPRY4 chr5 142310427 142326455 - protein_coding KNOWN OTTHUMG00000129663.2 16029 5930 12 ENSG00000281881.1 SPRY4-IT1 chr5 142317620 142318322 - lincRNA KNOWN OTTHUMG00000189512.1 703 703 1 ENSG00000238164.5 RP3-395M20.8 chr1 2549920 2557031 - antisense NOVEL OTTHUMG00000000818.3 7112 6137 19 ENSG00000236888.1 RPS20P5 chr1 57605847 57606206 - processed_pseudogene KNOWN OTTHUMG00000010066.1 360 360 1 ENSG00000277968.1 SPRY4-IT1_1 chr5 142317830 142317920 + misc_RNA NOVEL NA 91 91 1 ENSG00000274721.1 SPRY4-IT1_2 chr5 142318047 142318167 + misc_RNA NOVEL NA 121 121 1 ENSG00000231185.5 AC005592.2 chr5 142325293 142672001 + antisense NOVEL OTTHUMG00000133693.3 346709 1811 19 ENSG00000280643.1 AC005215.1 chr5 142534255 142534345 - miRNA NOVEL NA 91 91 1 ENSG00000225147.1 RPS12P10 chr5 142566700 142567076 + processed_pseudogene KNOWN OTTHUMG00000102185.1 377 377 1 ENSG00000113578.16 FGF1 chr5 142592178 142698070 - protein_coding KNOWN OTTHUMG00000059703.8 105893 5275 63 ENSG00000261757.1 AC005592.3 chr5 142703782 142705421 + lincRNA NOVEL OTTHUMG00000173470.1 1640 1640 1 ENSG00000236714.1 AC005592.1 chr5 142745600 142760998 + lincRNA NOVEL OTTHUMG00000059704.1 15399 2237 4 ENSG00000145819.14 ARHGAP26 chr5 142770384 143229011 + protein_coding KNOWN OTTHUMG00000059705.8 458628 13347 136 ENSG00000226272.4 ARHGAP26-AS1 chr5 142859604 142868922 - antisense NOVEL OTTHUMG00000059702.2 9319 990 16 ENSG00000238773.1 AL137855.1 chr1 57757084 57757176 + miRNA NOVEL NA 93 93 1 ENSG00000230789.1 ARHGAP26-IT1 chr5 143192500 143194166 + sense_intronic NOVEL OTTHUMG00000067192.1 1667 388 2 ENSG00000113580.13 NR3C1 chr5 143277931 143435512 - protein_coding KNOWN OTTHUMG00000129677.2 157582 9172 92 ENSG00000231579.3 RPL7P21 chr5 143332605 143333239 + processed_pseudogene KNOWN OTTHUMG00000157888.2 635 635 1 ENSG00000279679.1 RP11-278J6.5 chr5 143375628 143375883 - TEC KNOWN OTTHUMG00000188122.1 256 256 1 ENSG00000279130.1 RP11-278J6.4 chr5 143406959 143407420 + TEC KNOWN OTTHUMG00000188121.1 462 462 1 ENSG00000249429.1 CTD-2050E21.1 chr5 143489855 143531350 - lincRNA NOVEL OTTHUMG00000163174.1 41496 560 2 ENSG00000253023.1 RNU7-156P chr5 143542514 143542587 - snRNA KNOWN NA 74 74 1 ENSG00000251205.2 CTD-2050E21.2 chr5 143559219 143562548 + lincRNA NOVEL OTTHUMG00000163170.2 3330 525 4 ENSG00000249881.1 CTB-57H20.1 chr5 143605628 143828772 + sense_overlapping NOVEL OTTHUMG00000163171.1 223145 825 5 ENSG00000266478.1 MIR5197 chr5 143679860 143679971 + miRNA KNOWN NA 112 112 1 ENSG00000226759.6 DAB1-AS1 chr1 57860532 57880905 + antisense NOVEL OTTHUMG00000008286.7 20374 4336 80 ENSG00000225869.4 CTB-70D19.1 chr5 143752090 143752704 - processed_pseudogene KNOWN OTTHUMG00000163169.2 615 615 1 ENSG00000158497.2 HMHB1 chr5 143812161 143820719 + protein_coding KNOWN OTTHUMG00000163173.1 8559 384 2 ENSG00000239390.3 RN7SL87P chr5 144140879 144141166 + misc_RNA KNOWN NA 288 288 1 ENSG00000145817.15 YIPF5 chr5 144158159 144170714 - protein_coding KNOWN OTTHUMG00000129679.4 12556 3701 31 ENSG00000183775.9 KCTD16 chr5 144170832 144485686 + protein_coding KNOWN OTTHUMG00000163172.4 314855 14294 7 ENSG00000249605.1 CTC-218H9.1 chr5 144369334 144385310 + sense_intronic NOVEL OTTHUMG00000163168.1 15977 469 5 ENSG00000250972.1 CKS1BP5 chr5 144439206 144439478 + processed_pseudogene KNOWN OTTHUMG00000163167.1 273 273 1 ENSG00000213488.4 CTB-85P21.1 chr5 144522140 144522988 + processed_pseudogene KNOWN OTTHUMG00000163177.1 849 513 2 ENSG00000201423.1 RN7SKP246 chr5 144535354 144535670 - misc_RNA KNOWN NA 317 317 1 ENSG00000281461.1 AC005371.1 chr5 144984708 144984852 - miRNA NOVEL NA 145 145 1 ENSG00000229887.3 HNRNPA1P6 chr1 58048175 58049291 - unprocessed_pseudogene KNOWN OTTHUMG00000010071.2 1117 963 2 ENSG00000249229.2 NAMPTP2 chr5 145001853 145005789 - processed_pseudogene KNOWN OTTHUMG00000163347.2 3937 1115 2 ENSG00000221467.1 AC132803.1 chr5 145197775 145197859 + miRNA NOVEL NA 85 85 1 ENSG00000251031.1 CTC-367F4.1 chr5 145222610 145228982 - lincRNA NOVEL OTTHUMG00000163345.1 6373 493 2 ENSG00000215325.4 ASS1P10 chr5 145228811 145230054 + processed_pseudogene KNOWN OTTHUMG00000163346.1 1244 1244 1 ENSG00000250842.1 CTC-806A22.1 chr5 145337932 145381670 - lincRNA NOVEL OTTHUMG00000163476.1 43739 530 2 ENSG00000248125.1 CTB-73N10.1 chr5 145429868 145451099 + lincRNA NOVEL OTTHUMG00000163385.2 21232 1099 5 ENSG00000186314.10 PRELID2 chr5 145471799 145835369 - protein_coding KNOWN OTTHUMG00000163384.4 363571 5375 41 ENSG00000249363.1 CTB-78O21.1 chr5 145728360 145729349 - processed_pseudogene KNOWN OTTHUMG00000163386.2 990 876 2 ENSG00000204928.1 GRXCR2 chr5 145859733 145872968 - protein_coding KNOWN OTTHUMG00000163417.2 13236 747 3 ENSG00000156463.16 SH3RF2 chr5 145936579 146081791 + protein_coding KNOWN OTTHUMG00000129685.5 145213 7232 35 ENSG00000223416.3 RPS26P15 chr1 58056133 58056480 - processed_pseudogene KNOWN OTTHUMG00000010072.1 348 348 1 ENSG00000248493.1 AC005351.1 chr5 145997218 145998003 + processed_pseudogene KNOWN OTTHUMG00000163416.1 786 786 1 ENSG00000173261.7 PLAC8L1 chr5 146084386 146104369 - protein_coding KNOWN OTTHUMG00000163418.2 19984 656 8 ENSG00000251556.1 RP11-118M9.3 chr5 146099406 146120412 + antisense NOVEL OTTHUMG00000163443.1 21007 439 3 ENSG00000133706.16 LARS chr5 146113038 146182660 - protein_coding KNOWN OTTHUMG00000163429.2 69623 8118 151 ENSG00000239602.1 RP11-449H3.1 chr5 146137755 146138381 + processed_pseudogene KNOWN OTTHUMG00000157894.1 627 321 2 ENSG00000239317.1 RP11-449H3.2 chr5 146138771 146139008 + processed_pseudogene KNOWN OTTHUMG00000157895.1 238 238 1 ENSG00000275740.1 RP11-449H3.3 chr5 146203550 146339251 + protein_coding PUTATIVE OTTHUMG00000188625.1 135702 3311 20 ENSG00000091009.7 RBM27 chr5 146203600 146289132 + protein_coding KNOWN OTTHUMG00000163436.4 85533 6578 23 ENSG00000238374.1 RNU7-180P chr5 146245191 146245253 - snRNA KNOWN NA 63 63 1 ENSG00000250025.2 CTC-359M8.1 chr5 146307098 146376963 - antisense NOVEL OTTHUMG00000185377.1 69866 874 6 ENSG00000235038.1 RP11-393I23.4 chr1 58060139 58080274 + lincRNA NOVEL OTTHUMG00000010107.1 20136 620 5 ENSG00000091010.4 POU4F3 chr5 146339024 146340520 + protein_coding KNOWN OTTHUMG00000129684.2 1497 1182 2 ENSG00000271724.1 CTC-359M8.3 chr5 146375591 146376219 - sense_intronic NOVEL OTTHUMG00000163435.1 629 512 2 ENSG00000248842.1 CTB-1H10.1 chr5 146400981 146407359 + lincRNA NOVEL OTTHUMG00000163475.1 6379 312 2 ENSG00000113649.10 TCERG1 chr5 146447311 146511961 + protein_coding KNOWN OTTHUMG00000129683.4 64651 8714 130 ENSG00000277568.1 uc_338 chr5 146510116 146510271 + misc_RNA NOVEL NA 156 156 1 ENSG00000173250.2 GPR151 chr5 146513103 146516190 - protein_coding KNOWN OTTHUMG00000163444.1 3088 3088 1 ENSG00000250407.1 CTB-99A3.1 chr5 146563226 146617004 + antisense NOVEL OTTHUMG00000163449.1 53779 691 4 ENSG00000156475.17 PPP2R2B chr5 146581146 147084784 - protein_coding KNOWN OTTHUMG00000163381.9 503639 13206 145 ENSG00000241291.3 RN7SL791P chr5 146656401 146656695 - misc_RNA KNOWN NA 295 295 1 ENSG00000248568.1 KRT8P48 chr5 146706381 146707600 - processed_pseudogene KNOWN OTTHUMG00000163409.1 1220 1220 1 ENSG00000230546.1 RP11-393I23.3 chr1 58084419 58084559 + unprocessed_pseudogene KNOWN OTTHUMG00000010065.1 141 141 1 ENSG00000265875.1 AC011357.1 chr5 146734835 146734904 + miRNA NOVEL NA 70 70 1 ENSG00000249553.1 PPP2R2B-IT1 chr5 146914207 146919506 - sense_intronic NOVEL OTTHUMG00000129687.3 5300 447 4 ENSG00000250343.1 CTC-255N20.1 chr5 147180204 147234859 - antisense NOVEL OTTHUMG00000163410.1 54656 863 3 ENSG00000169302.13 STK32A chr5 147234963 147387852 + protein_coding KNOWN OTTHUMG00000163411.3 152890 7776 56 ENSG00000113657.11 DPYSL3 chr5 147390811 147510056 - protein_coding KNOWN OTTHUMG00000163437.2 119246 7164 56 ENSG00000272239.1 CTB-108O6.2 chr5 147401760 147401996 + antisense NOVEL OTTHUMG00000185600.1 237 237 1 ENSG00000280780.1 JAKMIP2-AS1 chr5 147559994 147662009 + antisense KNOWN OTTHUMG00000189513.1 102016 2106 16 ENSG00000176049.14 JAKMIP2 chr5 147585439 147782848 - protein_coding KNOWN OTTHUMG00000129731.2 197410 9275 93 ENSG00000164266.9 SPINK1 chr5 147824568 147831786 - protein_coding KNOWN OTTHUMG00000129730.3 7219 1480 9 ENSG00000249518.1 CTC-327F10.1 chr5 147851644 147852659 - processed_pseudogene KNOWN OTTHUMG00000163423.1 1016 1016 1 ENSG00000233216.1 RP11-414C16.1 chr1 58228682 58229003 - processed_pseudogene KNOWN OTTHUMG00000010069.1 322 322 1 ENSG00000164265.7 SCGB3A2 chr5 147870682 147882191 + protein_coding KNOWN OTTHUMG00000129729.2 11510 1075 12 ENSG00000178776.4 C5orf46 chr5 147880726 147906538 - protein_coding KNOWN OTTHUMG00000163420.1 25813 1232 9 ENSG00000248362.1 CTC-327F10.5 chr5 147886086 147886878 - antisense NOVEL OTTHUMG00000163422.1 793 793 1 ENSG00000251320.1 CTC-327F10.4 chr5 147887112 147887704 + antisense NOVEL OTTHUMG00000163419.1 593 593 1 ENSG00000250346.1 EEF1GP2 chr5 147922179 147923421 + processed_pseudogene KNOWN OTTHUMG00000163421.1 1243 1243 1 ENSG00000133710.14 SPINK5 chr5 148025683 148137289 + protein_coding KNOWN OTTHUMG00000134305.7 111607 4381 176 ENSG00000196800.5 SPINK14 chr5 148169733 148175398 + protein_coding KNOWN OTTHUMG00000129732.2 5666 294 7 ENSG00000178172.5 SPINK6 chr5 148202794 148215137 + protein_coding KNOWN OTTHUMG00000163425.1 12344 733 13 ENSG00000249503.1 HMGN1P16 chr5 148221360 148221642 - processed_pseudogene KNOWN OTTHUMG00000163428.1 283 283 1 ENSG00000248109.1 CTC-295J13.3 chr5 148238570 148242594 + lincRNA NOVEL OTTHUMG00000163424.1 4025 226 2 ENSG00000162600.10 OMA1 chr1 58415384 58546802 - protein_coding KNOWN OTTHUMG00000010068.5 131419 3718 51 ENSG00000214510.8 SPINK13 chr5 148268180 148286254 + protein_coding KNOWN OTTHUMG00000163426.3 18075 1174 17 ENSG00000247199.3 RP11-373N22.3 chr5 148268307 148383783 - antisense NOVEL OTTHUMG00000163558.2 115477 2033 5 ENSG00000249834.3 PGBD4P3 chr5 148307298 148308258 + processed_pseudogene KNOWN OTTHUMG00000163432.3 961 581 2 ENSG00000145879.9 SPINK7 chr5 148312419 148315922 + protein_coding KNOWN OTTHUMG00000163522.5 3504 1545 15 ENSG00000204909.6 SPINK9 chr5 148321203 148339849 + protein_coding KNOWN OTTHUMG00000163431.2 18647 841 9 ENSG00000145868.15 FBXO38 chr5 148383935 148442836 + protein_coding KNOWN OTTHUMG00000129929.5 58902 8722 145 ENSG00000274799.1 Metazoa_SRP chr5 148389748 148390029 + misc_RNA NOVEL NA 282 282 1 ENSG00000251330.3 CTD-2283N19.1 chr5 148430159 148430807 - antisense NOVEL OTTHUMG00000163560.2 649 514 2 ENSG00000164270.16 HTR4 chr5 148451032 148677235 - protein_coding KNOWN OTTHUMG00000129931.7 226204 7045 85 ENSG00000253297.1 CTB-160O22.1 chr5 148644687 148646390 - sense_intronic NOVEL OTTHUMG00000163564.1 1704 1704 1 ENSG00000270209.1 RP4-592A1.4 chr1 58552913 58553333 - processed_pseudogene KNOWN OTTHUMG00000184289.1 421 421 1 ENSG00000169252.5 ADRB2 chr5 148825245 148828687 + protein_coding KNOWN OTTHUMG00000129933.1 3443 3443 1 ENSG00000169247.10 SH3TC2 chr5 148923639 149063163 - protein_coding KNOWN OTTHUMG00000129930.4 139525 15047 143 ENSG00000272411.1 RP11-44B19.1 chr5 148970340 148970653 + antisense NOVEL OTTHUMG00000185601.1 314 314 1 ENSG00000251842.1 RNU6-732P chr5 149057554 149057656 - snRNA KNOWN NA 103 103 1 ENSG00000207714.2 MIR584 chr5 149062304 149062414 - miRNA KNOWN NA 111 111 1 ENSG00000250072.4 CTC-529P8.1 chr5 149063317 149109787 + lincRNA NOVEL OTTHUMG00000163433.1 46471 4313 15 ENSG00000200161.1 RN7SKP145 chr5 149116178 149116480 - misc_RNA KNOWN NA 303 303 1 ENSG00000173210.18 ABLIM3 chr5 149141483 149260542 + protein_coding KNOWN OTTHUMG00000129932.3 119060 7225 161 ENSG00000248647.2 RP11-331K21.1 chr5 149163955 149276776 - antisense NOVEL OTTHUMG00000163434.2 112822 738 5 ENSG00000253406.1 AC012613.2 chr5 149216523 149276805 - antisense NOVEL OTTHUMG00000163504.1 60283 4533 2 ENSG00000157873.16 TNFRSF14 chr1 2555639 2565382 + protein_coding KNOWN OTTHUMG00000000792.17 9744 6219 85 ENSG00000264128.2 RN7SL713P chr1 58565631 58565932 - misc_RNA KNOWN NA 302 302 1 ENSG00000157510.12 AFAP1L1 chr5 149271871 149341802 + protein_coding KNOWN OTTHUMG00000163441.3 69932 4721 66 ENSG00000164284.13 GRPEL2 chr5 149345430 149354583 + protein_coding KNOWN OTTHUMG00000130048.2 9154 4419 14 ENSG00000253618.1 GRPEL2-AS1 chr5 149348116 149357642 - antisense NOVEL OTTHUMG00000165071.1 9527 401 2 ENSG00000145882.9 PCYOX1L chr5 149358007 149369653 + protein_coding KNOWN OTTHUMG00000130052.4 11647 6069 35 ENSG00000127743.5 IL17B chr5 149371324 149404202 - protein_coding KNOWN OTTHUMG00000130051.3 32879 1211 9 ENSG00000253865.1 RP11-394O4.3 chr5 149372174 149375116 + antisense NOVEL OTTHUMG00000165070.1 2943 588 2 ENSG00000249669.6 MIR143HG chr5 149406689 149428678 + lincRNA KNOWN OTTHUMG00000163464.7 21990 15910 37 ENSG00000275871.1 RP11-394O4.6 chr5 149425771 149428289 - lincRNA NOVEL OTTHUMG00000187188.1 2519 422 2 ENSG00000208035.1 MIR143 chr5 149428918 149429023 + miRNA KNOWN NA 106 106 1 ENSG00000269936.3 RP11-394O4.5 chr5 149430286 149432834 + lincRNA NOVEL OTTHUMG00000184101.1 2549 2549 1 ENSG00000184292.6 TACSTD2 chr1 58575423 58577773 - protein_coding KNOWN OTTHUMG00000010067.1 2351 2351 1 ENSG00000276365.1 MIR145 chr5 149430646 149430733 + miRNA KNOWN NA 88 88 1 ENSG00000113712.15 CSNK1A1 chr5 149492197 149551552 - protein_coding KNOWN OTTHUMG00000163463.4 59356 7745 82 ENSG00000230551.4 CTB-89H12.4 chr5 149494314 149504670 - processed_transcript NOVEL OTTHUMG00000163462.2 10357 8636 2 ENSG00000241112.1 RPL29P14 chr5 149545383 149545810 - processed_pseudogene KNOWN OTTHUMG00000157900.1 428 428 1 ENSG00000183111.10 ARHGEF37 chr5 149551947 149634968 + protein_coding KNOWN OTTHUMG00000163491.1 83022 5324 19 ENSG00000221135.1 AC021078.1 chr5 149604276 149604417 - miRNA NOVEL NA 142 142 1 ENSG00000222213.1 RNU6-588P chr5 149606637 149606741 - snRNA KNOWN NA 105 105 1 ENSG00000221043.2 U3 chr5 149695748 149695959 - snoRNA NOVEL NA 212 212 1 ENSG00000242928.3 RN7SL868P chr5 149722070 149722372 + misc_RNA KNOWN NA 303 303 1 ENSG00000155846.15 PPARGC1B chr5 149730298 149855022 + protein_coding KNOWN OTTHUMG00000130055.2 124725 12889 59 ENSG00000185839.3 RP4-592A1.2 chr1 58630841 58631530 - processed_pseudogene KNOWN OTTHUMG00000010070.1 690 690 1 ENSG00000199047.2 MIR378A chr5 149732797 149732908 + miRNA KNOWN NA 112 112 1 ENSG00000132915.9 PDE6A chr5 149857955 149944793 - protein_coding KNOWN OTTHUMG00000130047.2 86839 7415 86 ENSG00000251583.1 AC008427.2 chr5 149932014 149932668 - processed_pseudogene KNOWN OTTHUMG00000163492.1 655 655 1 ENSG00000200334.1 Y_RNA chr5 149940030 149940131 - misc_RNA NOVEL NA 102 102 1 ENSG00000155850.7 SLC26A2 chr5 149960737 149993455 + protein_coding KNOWN OTTHUMG00000130054.3 32719 8606 8 ENSG00000164296.6 TIGD6 chr5 149993118 150001167 - protein_coding KNOWN OTTHUMG00000130045.4 8050 4640 6 ENSG00000113716.11 HMGXB3 chr5 150000046 150053142 + protein_coding KNOWN OTTHUMG00000163493.1 53097 6263 75 ENSG00000248696.1 AC011406.2 chr5 150014785 150015154 - processed_pseudogene KNOWN OTTHUMG00000163494.1 370 370 1 ENSG00000241907.1 RPS20P4 chr5 150021567 150021921 - processed_pseudogene KNOWN OTTHUMG00000157903.1 355 355 1 ENSG00000182578.12 CSF1R chr5 150053291 150113372 - protein_coding KNOWN OTTHUMG00000130050.2 60082 5151 74 ENSG00000162601.8 MYSM1 chr1 58654739 58700092 - protein_coding KNOWN OTTHUMG00000009533.2 45354 8938 76 ENSG00000214485.6 RPL7P1 chr5 150094302 150095048 + processed_pseudogene KNOWN OTTHUMG00000157906.1 747 747 1 ENSG00000199409.1 Y_RNA chr5 150098406 150098506 + misc_RNA NOVEL NA 101 101 1 ENSG00000113721.12 PDGFRB chr5 150113837 150155872 - protein_coding KNOWN OTTHUMG00000130053.3 42036 7137 73 ENSG00000113722.15 CDX1 chr5 150166795 150184558 + protein_coding KNOWN OTTHUMG00000169772.9 17764 1758 7 ENSG00000011083.7 SLC6A7 chr5 150189957 150222788 + protein_coding KNOWN OTTHUMG00000130046.3 32832 4391 32 ENSG00000070808.14 CAMK2A chr5 150219491 150290291 - protein_coding KNOWN OTTHUMG00000134281.5 70801 6150 71 ENSG00000273560.1 AC011372.1 chr5 150250811 150250878 - miRNA NOVEL NA 68 68 1 ENSG00000183876.8 ARSI chr5 150296343 150339307 - protein_coding KNOWN OTTHUMG00000163479.2 42965 3269 6 ENSG00000070814.16 TCOF1 chr5 150357639 150400308 + protein_coding KNOWN OTTHUMG00000130081.9 42670 11278 246 ENSG00000019582.13 CD74 chr5 150401637 150412929 - protein_coding KNOWN OTTHUMG00000163559.3 11293 3184 67 ENSG00000264081.1 AL136985.1 chr1 58764849 58764935 - miRNA NOVEL NA 87 87 1 ENSG00000164587.10 RPS14 chr5 150443190 150449756 - protein_coding KNOWN OTTHUMG00000130080.2 6567 4544 30 ENSG00000254333.1 CTC-367J11.1 chr5 150475531 150485968 - lincRNA NOVEL OTTHUMG00000163588.1 10438 368 3 ENSG00000070614.13 NDST1 chr5 150485818 150558211 + protein_coding KNOWN OTTHUMG00000163572.3 72394 9529 44 ENSG00000171992.11 SYNPO chr5 150601080 150659220 + protein_coding KNOWN OTTHUMG00000130078.2 58141 10258 13 ENSG00000253852.1 CTB-140J7.2 chr5 150608428 150615354 - antisense NOVEL OTTHUMG00000165096.1 6927 617 3 ENSG00000164591.12 MYOZ3 chr5 150660874 150679365 + protein_coding KNOWN OTTHUMG00000130077.3 18492 6037 30 ENSG00000250309.2 CTC-345K18.2 chr5 150670658 150672390 - antisense NOVEL OTTHUMG00000165097.1 1733 425 2 ENSG00000086589.10 RBM22 chr5 150690794 150701107 - protein_coding KNOWN OTTHUMG00000163589.3 10314 3615 52 ENSG00000132912.11 DCTN4 chr5 150708440 150759109 - protein_coding KNOWN OTTHUMG00000130079.4 50670 6417 109 ENSG00000256235.1 SMIM3 chr5 150777946 150796734 + protein_coding KNOWN OTTHUMG00000163646.2 18789 2332 2 ENSG00000177606.6 JUN chr1 58780788 58784327 - protein_coding KNOWN OTTHUMG00000008376.1 3540 3540 1 ENSG00000237693.4 IRGM chr5 150846523 150900736 + protein_coding KNOWN OTTHUMG00000163647.2 54214 2271 7 ENSG00000145908.11 ZNF300 chr5 150894392 150904983 - protein_coding KNOWN OTTHUMG00000130076.2 10592 4411 29 ENSG00000197083.10 ZNF300P1 chr5 150930645 150946289 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000154830.2 15645 3127 9 ENSG00000274235.1 CTC-311G1.1 chr5 150950109 150952460 - unprocessed_pseudogene KNOWN OTTHUMG00000187637.1 2352 766 3 ENSG00000277866.1 CTC-311G1.2 chr5 150978419 150979175 + unprocessed_pseudogene KNOWN OTTHUMG00000187642.1 757 757 1 ENSG00000279109.1 AC008641.1 chr5 151016918 151017411 - protein_coding KNOWN NA 494 69 3 ENSG00000211445.10 GPX3 chr5 151020438 151028993 + protein_coding KNOWN OTTHUMG00000163693.2 8556 3163 42 ENSG00000145901.13 TNIP1 chr5 151029945 151093577 - protein_coding KNOWN OTTHUMG00000163722.4 63633 5793 245 ENSG00000197043.12 ANXA6 chr5 151100712 151157882 - protein_coding KNOWN OTTHUMG00000164179.5 57171 5427 153 ENSG00000254298.1 CTB-17P3.4 chr5 151158106 151158462 - lincRNA NOVEL OTTHUMG00000164977.1 357 248 2 ENSG00000234807.5 LINC01135 chr1 58785160 58899594 + lincRNA NOVEL OTTHUMG00000008377.2 114435 996 4 ENSG00000198624.11 CCDC69 chr5 151181052 151224145 - protein_coding KNOWN OTTHUMG00000130127.2 43094 4993 39 ENSG00000196743.7 GM2A chr5 151212150 151270440 + protein_coding KNOWN OTTHUMG00000130124.2 58291 4479 10 ENSG00000186334.8 SLC36A3 chr5 151276762 151303766 - protein_coding KNOWN OTTHUMG00000130128.2 27005 4575 30 ENSG00000186335.7 SLC36A2 chr5 151314978 151347590 - protein_coding KNOWN OTTHUMG00000130129.2 32613 4263 45 ENSG00000270904.1 CTC-224D3.1 chr5 151319422 151319776 + processed_pseudogene KNOWN OTTHUMG00000184553.1 355 355 1 ENSG00000253897.1 CTB-23I7.1 chr5 151366433 151431352 - unprocessed_pseudogene KNOWN OTTHUMG00000163498.1 64920 1176 9 ENSG00000252270.1 AC034205.1 chr5 151368444 151368515 - miRNA NOVEL NA 72 72 1 ENSG00000253472.1 CTB-23I7.2 chr5 151378003 151378640 - processed_pseudogene KNOWN OTTHUMG00000163501.1 638 638 1 ENSG00000271494.1 CTB-23I7.3 chr5 151380341 151382381 + processed_pseudogene KNOWN OTTHUMG00000184562.1 2041 1376 2 ENSG00000123643.11 SLC36A1 chr5 151437046 151492381 + protein_coding KNOWN OTTHUMG00000130125.3 55336 6980 80 ENSG00000272226.1 RP11-63G10.3 chr1 58812808 58813342 - lincRNA NOVEL OTTHUMG00000185812.1 535 535 1 ENSG00000200227.1 RNA5SP197 chr5 151477459 151477577 - rRNA KNOWN NA 119 119 1 ENSG00000086570.11 FAT2 chr5 151504093 151568944 - protein_coding KNOWN OTTHUMG00000130126.2 64852 14537 34 ENSG00000271795.1 CTC-251D13.1 chr5 151509453 151512769 + antisense NOVEL OTTHUMG00000185605.1 3317 3317 1 ENSG00000276622.1 MIR6499 chr5 151522087 151522148 - miRNA KNOWN NA 62 62 1 ENSG00000260581.1 CTB-113P19.4 chr5 151652275 151655449 + antisense NOVEL OTTHUMG00000175434.1 3175 1567 2 ENSG00000113140.9 SPARC chr5 151661096 151687165 - protein_coding KNOWN OTTHUMG00000130122.3 26070 4831 44 ENSG00000249035.5 CTB-113P19.1 chr5 151676945 151724782 + antisense NOVEL OTTHUMG00000163500.2 47838 2191 8 ENSG00000222102.1 RN7SKP232 chr5 151704289 151704578 - misc_RNA KNOWN NA 290 290 1 ENSG00000272112.1 CTB-113P19.5 chr5 151724831 151725356 - lincRNA NOVEL OTTHUMG00000185606.1 526 526 1 ENSG00000177556.10 ATOX1 chr5 151742316 151772532 - protein_coding KNOWN OTTHUMG00000163499.3 30217 5239 24 ENSG00000231740.1 RP11-63G10.2 chr1 58838448 58851254 - lincRNA NOVEL OTTHUMG00000008374.1 12807 395 3 ENSG00000253921.1 CTB-113P19.3 chr5 151753992 151767247 + antisense NOVEL OTTHUMG00000163524.1 13256 570 3 ENSG00000213433.5 RPLP1P6 chr5 151765859 151766378 - transcribed_processed_pseudogene KNOWN OTTHUMG00000157909.2 520 520 2 ENSG00000275765.3 RP11-54C4.3 chr5 151769793 151771508 - protein_coding NOVEL OTTHUMG00000189272.1 1716 1175 4 ENSG00000145907.13 G3BP1 chr5 151771045 151812785 + protein_coding KNOWN OTTHUMG00000130123.2 41741 12406 89 ENSG00000145888.9 GLRA1 chr5 151822513 151924842 - protein_coding KNOWN OTTHUMG00000130121.2 102330 2434 34 ENSG00000270978.1 RP11-54C4.2 chr5 151848886 151850791 + processed_pseudogene KNOWN OTTHUMG00000184548.1 1906 1115 2 ENSG00000222308.1 RNA5SP198 chr5 151875566 151875692 - rRNA KNOWN NA 127 127 1 ENSG00000254226.4 CTB-12O2.1 chr5 151949571 152270448 + lincRNA NOVEL OTTHUMG00000163523.1 320878 3745 17 ENSG00000132911.4 NMUR2 chr5 152391532 152433368 - protein_coding KNOWN OTTHUMG00000130131.2 41837 2345 8 ENSG00000242080.1 CTC-550M4.1 chr5 152495718 152496017 - processed_pseudogene KNOWN OTTHUMG00000157910.1 300 300 1 ENSG00000232453.4 RP4-794H19.1 chr1 58882868 58896703 - lincRNA NOVEL OTTHUMG00000008375.1 13836 1249 6 ENSG00000249484.7 LINC01470 chr5 152618965 153223543 - lincRNA NOVEL OTTHUMG00000163486.3 604579 3409 22 ENSG00000155511.16 GRIA1 chr5 153489615 153813869 + protein_coding KNOWN OTTHUMG00000130148.6 324255 7636 125 ENSG00000280480.1 AC025156.1 chr5 153568290 153568412 - miRNA NOVEL NA 123 123 1 ENSG00000242976.3 RN7SL177P chr5 153755382 153755680 + misc_RNA KNOWN NA 299 299 1 ENSG00000251183.1 AC091962.3 chr5 153887428 153898987 - lincRNA NOVEL OTTHUMG00000163488.1 11560 537 4 ENSG00000261382.1 RP11-461L18.1 chr5 153901459 153903223 + lincRNA NOVEL OTTHUMG00000175437.2 1765 1765 1 ENSG00000055147.16 FAM114A2 chr5 153990128 154038936 - protein_coding KNOWN OTTHUMG00000130147.12 48809 6543 121 ENSG00000037749.10 MFAP3 chr5 154038906 154220478 + protein_coding KNOWN OTTHUMG00000130149.2 181573 4792 37 ENSG00000251710.1 AC010295.1 chr5 154093304 154093379 - miRNA NOVEL NA 76 76 1 ENSG00000164574.14 GALNT10 chr5 154190730 154420984 + protein_coding KNOWN OTTHUMG00000130145.4 230255 10496 71 ENSG00000225931.3 RP3-395M20.7 chr1 2566410 2569888 + TEC KNOWN OTTHUMG00000158429.2 3479 1297 3 ENSG00000228121.1 PHBP3 chr1 58999676 59000494 + processed_pseudogene KNOWN OTTHUMG00000008378.1 819 819 1 ENSG00000245275.6 SAP30L-AS1 chr5 154329437 154445850 - antisense NOVEL OTTHUMG00000163570.2 116414 1972 12 ENSG00000253119.1 HNRNPA3P7 chr5 154337471 154338452 - processed_pseudogene KNOWN OTTHUMG00000163603.1 982 982 1 ENSG00000221070.1 AC008625.1 chr5 154340032 154340126 - miRNA NOVEL NA 95 95 1 ENSG00000221430.1 MIR1294 chr5 154347106 154347247 + miRNA KNOWN NA 142 142 1 ENSG00000241963.3 RN7SL655P chr5 154349428 154349725 + misc_RNA KNOWN NA 298 298 1 ENSG00000164576.10 SAP30L chr5 154445957 154461054 + protein_coding KNOWN OTTHUMG00000130146.6 15098 6755 29 ENSG00000113196.2 HAND1 chr5 154474972 154478264 - protein_coding KNOWN OTTHUMG00000130193.1 3293 1738 2 ENSG00000254293.1 CTB-158E9.1 chr5 154483917 154486150 - lincRNA NOVEL OTTHUMG00000163601.1 2234 1865 4 ENSG00000253886.1 CTB-158E9.2 chr5 154493576 154494743 + processed_pseudogene KNOWN OTTHUMG00000163602.2 1168 1168 1 ENSG00000253146.1 CIR1P1 chr5 154559308 154560440 - processed_pseudogene KNOWN OTTHUMG00000164140.1 1133 1133 1 ENSG00000230812.4 LINC01358 chr1 59020387 59044614 + lincRNA NOVEL OTTHUMG00000008373.2 24228 747 10 ENSG00000264760.1 MIR3141 chr5 154596012 154596072 - miRNA KNOWN NA 61 61 1 ENSG00000221552.1 MIR1303 chr5 154685776 154685861 + miRNA KNOWN NA 86 86 1 ENSG00000274472.1 Y_RNA chr5 154705626 154705727 + misc_RNA NOVEL NA 102 102 1 ENSG00000155506.15 LARP1 chr5 154712902 154817607 + protein_coding KNOWN OTTHUMG00000130191.2 104706 8492 101 ENSG00000272197.2 Metazoa_SRP chr5 154718383 154718689 - misc_RNA NOVEL NA 307 307 1 ENSG00000241187.1 CTC-209L16.1 chr5 154729231 154729694 + processed_pseudogene KNOWN OTTHUMG00000157914.1 464 464 1 ENSG00000170271.9 FAXDC2 chr5 154818491 154859252 - protein_coding KNOWN OTTHUMG00000164141.1 40762 7222 84 ENSG00000277039.1 Metazoa_SRP chr5 154821943 154822258 + misc_RNA NOVEL NA 316 316 1 ENSG00000263361.1 MIR378H chr5 154829458 154829540 + miRNA KNOWN NA 83 83 1 ENSG00000155508.12 CNOT8 chr5 154857553 154876793 + protein_coding KNOWN OTTHUMG00000130192.2 19241 3930 127 ENSG00000241042.1 RP11-145M4.1 chr1 59054397 59056049 - lincRNA NOVEL OTTHUMG00000008401.1 1653 171 2 ENSG00000082516.8 GEMIN5 chr5 154887416 154938209 - protein_coding KNOWN OTTHUMG00000130189.2 50794 5637 33 ENSG00000082515.15 MRPL22 chr5 154941070 154969411 + protein_coding KNOWN OTTHUMG00000130190.2 28342 5267 45 ENSG00000253261.1 CTC-280C13.1 chr5 154993598 154994445 + processed_pseudogene KNOWN OTTHUMG00000164142.1 848 339 2 ENSG00000226650.5 KIF4B chr5 155013755 155018132 + protein_coding KNOWN OTTHUMG00000164143.1 4378 4378 1 ENSG00000221131.2 AC008410.1 chr5 155024714 155024800 - miRNA NOVEL NA 87 87 1 ENSG00000253646.1 CTD-2311A18.1 chr5 155111184 155112324 - processed_pseudogene KNOWN OTTHUMG00000164144.1 1141 851 2 ENSG00000271477.1 CTC-447K7.1 chr5 155397291 155398353 + processed_pseudogene KNOWN OTTHUMG00000184554.2 1063 649 2 ENSG00000270442.1 CTB-95D12.1 chr5 155491336 155493598 + processed_pseudogene KNOWN OTTHUMG00000184569.1 2263 2263 1 ENSG00000200275.1 RNA5SP199 chr5 155845437 155845528 + rRNA KNOWN NA 92 92 1 ENSG00000280546.1 AC140677.1 chr5 155845469 155845527 + miRNA NOVEL NA 59 59 1 ENSG00000235215.2 RP11-145M4.2 chr1 59055999 59078116 - lincRNA NOVEL OTTHUMG00000008402.1 22118 317 3 ENSG00000170624.12 SGCD chr5 155870344 156767788 + protein_coding KNOWN OTTHUMG00000163445.4 897445 10584 33 ENSG00000253370.2 CTB-56J15.1 chr5 156458398 156458507 - unprocessed_pseudogene KNOWN OTTHUMG00000163451.2 110 110 1 ENSG00000279646.1 AC016577.1 chr5 156658587 156660435 - protein_coding KNOWN NA 1849 228 2 ENSG00000254163.1 CTC-340I23.2 chr5 156704058 156739812 - antisense NOVEL OTTHUMG00000163450.1 35755 460 3 ENSG00000199468.1 RNU6-556P chr5 156814130 156814234 + snRNA KNOWN NA 105 105 1 ENSG00000231989.3 PPP1R2P3 chr5 156850563 156851174 + processed_pseudogene KNOWN OTTHUMG00000163467.2 612 612 1 ENSG00000145850.7 TIMD4 chr5 156919282 156963255 - protein_coding KNOWN OTTHUMG00000130244.2 43974 1555 22 ENSG00000270560.1 APOOP1 chr5 156924119 156924710 + processed_pseudogene KNOWN OTTHUMG00000184530.1 592 592 1 ENSG00000113249.11 HAVCR1 chr5 157029413 157059119 - protein_coding KNOWN OTTHUMG00000163466.2 29707 2151 41 ENSG00000135077.7 HAVCR2 chr5 157085832 157142869 - protein_coding KNOWN OTTHUMG00000130249.2 57038 3804 26 ENSG00000237352.2 RP11-145M4.3 chr1 59056643 59088195 + lincRNA NOVEL OTTHUMG00000008404.2 31553 623 4 ENSG00000254246.1 CTB-120L21.1 chr5 157104788 157114900 + antisense NOVEL OTTHUMG00000163482.1 10113 275 2 ENSG00000155868.7 MED7 chr5 157137412 157159019 - protein_coding KNOWN OTTHUMG00000130243.2 21608 2913 7 ENSG00000113263.11 ITK chr5 157142933 157255191 + protein_coding KNOWN OTTHUMG00000130245.3 112259 8604 66 ENSG00000170613.4 FAM71B chr5 157161846 157166264 - protein_coding KNOWN OTTHUMG00000130246.2 4419 2515 2 ENSG00000253980.1 CTB-4E7.1 chr5 157199242 157224380 - antisense NOVEL OTTHUMG00000163481.1 25139 569 2 ENSG00000222086.1 AC010609.1 chr5 157235185 157235299 - miRNA NOVEL NA 115 115 1 ENSG00000253653.1 CTC-248O19.1 chr5 157260122 157266625 - antisense NOVEL OTTHUMG00000163496.1 6504 911 3 ENSG00000055163.17 CYFIP2 chr5 157266079 157395595 + protein_coding KNOWN OTTHUMG00000163484.5 129517 10582 289 ENSG00000172568.4 FNDC9 chr5 157341600 157345721 - protein_coding KNOWN OTTHUMG00000130248.2 4122 2285 4 ENSG00000251405.2 CTB-109A12.1 chr5 157362615 157460078 - sense_overlapping NOVEL OTTHUMG00000163480.2 97464 2653 5 ENSG00000224609.5 HSD52 chr1 59131936 59208121 - processed_transcript NOVEL OTTHUMG00000008403.5 76186 2641 32 ENSG00000248544.2 CTB-47B11.3 chr5 157375741 157384950 - antisense NOVEL OTTHUMG00000163483.2 9210 2078 5 ENSG00000135074.14 ADAM19 chr5 157395534 157575775 - protein_coding KNOWN OTTHUMG00000130242.2 180242 7704 82 ENSG00000253155.1 CTB-47B11.1 chr5 157422439 157422873 + processed_pseudogene KNOWN OTTHUMG00000157917.1 435 435 1 ENSG00000172548.13 NIPAL4 chr5 157460019 157474717 + protein_coding KNOWN OTTHUMG00000163497.1 14699 4208 26 ENSG00000253519.1 AC106801.1 chr5 157565964 157569098 + antisense NOVEL OTTHUMG00000163509.1 3135 1845 2 ENSG00000252068.1 RNU6-390P chr5 157579497 157579599 + snRNA KNOWN NA 103 103 1 ENSG00000254336.1 AC008694.2 chr5 157604707 157605637 - processed_pseudogene KNOWN OTTHUMG00000163510.1 931 306 2 ENSG00000039600.9 SOX30 chr5 157625679 157671480 - protein_coding KNOWN OTTHUMG00000130247.2 45802 3471 15 ENSG00000187658.6 C5orf52 chr5 157671553 157680143 + protein_coding KNOWN OTTHUMG00000154518.1 8591 686 3 ENSG00000253798.1 AC008694.3 chr5 157682985 157690266 - antisense NOVEL OTTHUMG00000163511.1 7282 428 2 ENSG00000281041.1 RP11-470E16.2 chr1 59132473 59240555 + lincRNA NOVEL OTTHUMG00000189693.1 108083 1524 7 ENSG00000113272.12 THG1L chr5 157731197 157741448 + protein_coding KNOWN OTTHUMG00000130254.4 10252 3220 15 ENSG00000155858.5 LSM11 chr5 157743695 157760709 + protein_coding KNOWN OTTHUMG00000130255.2 17015 6584 4 ENSG00000253630.1 CTC-370J7.1 chr5 157747504 157747707 - unprocessed_pseudogene KNOWN OTTHUMG00000163528.1 204 204 1 ENSG00000113282.12 CLINT1 chr5 157785743 157859175 - protein_coding KNOWN OTTHUMG00000163527.2 73433 6368 68 ENSG00000206819.1 RNU6-260P chr5 157809098 157809204 + snRNA KNOWN NA 107 107 1 ENSG00000244331.1 CTB-47B8.1 chr5 157931258 157931563 - processed_pseudogene KNOWN OTTHUMG00000157920.1 306 306 1 ENSG00000222626.1 RNU2-48P chr5 157976766 157976956 - snRNA KNOWN NA 191 191 1 ENSG00000253743.1 MARK2P11 chr5 157984658 157989990 - unprocessed_pseudogene KNOWN OTTHUMG00000163529.3 5333 1670 5 ENSG00000213414.3 CTB-47B8.5 chr5 157986146 157987706 - processed_pseudogene KNOWN OTTHUMG00000163566.1 1561 1561 1 ENSG00000253422.1 CTB-47B8.4 chr5 158078099 158078764 - processed_pseudogene KNOWN OTTHUMG00000163533.1 666 666 1 ENSG00000270457.1 RP11-467C18.1 chr1 59289303 59289640 - lincRNA NOVEL OTTHUMG00000185112.1 338 338 1 ENSG00000253792.1 CTC-436K13.5 chr5 158173601 158176422 - lincRNA NOVEL OTTHUMG00000163534.1 2822 314 2 ENSG00000253673.1 CTC-436K13.1 chr5 158175396 158200016 + lincRNA NOVEL OTTHUMG00000163515.1 24621 681 2 ENSG00000254047.2 CTC-436K13.4 chr5 158188977 158189911 - processed_pseudogene KNOWN OTTHUMG00000163532.2 935 935 1 ENSG00000253449.1 CTC-436K13.6 chr5 158225352 158234376 - lincRNA NOVEL OTTHUMG00000163530.1 9025 771 5 ENSG00000253424.1 CTC-436K13.3 chr5 158256137 158258436 + lincRNA NOVEL OTTHUMG00000163521.1 2300 548 2 ENSG00000253134.1 CTC-436K13.2 chr5 158275711 158278813 + lincRNA NOVEL OTTHUMG00000163517.1 3103 346 2 ENSG00000276778.1 RP11-524N5.1 chr5 158320683 158409773 - lincRNA NOVEL OTTHUMG00000186522.1 89091 3748 7 ENSG00000254350.1 RP11-542A14.1 chr5 158424585 158452758 + lincRNA NOVEL OTTHUMG00000163518.1 28174 706 2 ENSG00000272085.1 RP11-542A14.2 chr5 158464465 158464678 + lincRNA NOVEL OTTHUMG00000185607.1 214 214 1 ENSG00000254135.1 RP11-32D16.1 chr5 158485190 158534438 + lincRNA NOVEL OTTHUMG00000163519.1 49249 976 5 ENSG00000172456.15 FGGY chr1 59296638 59767675 + protein_coding KNOWN OTTHUMG00000008424.14 471038 6229 144 ENSG00000281605.1 AC091939.1 chr5 158550836 158550930 - miRNA NOVEL NA 95 95 1 ENSG00000164330.15 EBF1 chr5 158695916 159099761 - protein_coding KNOWN OTTHUMG00000130304.4 403846 6178 127 ENSG00000253811.1 CTD-2363C16.1 chr5 158983006 158984789 + antisense NOVEL OTTHUMG00000163516.1 1784 563 3 ENSG00000253456.1 CTD-2363C16.2 chr5 158985806 158987199 + antisense NOVEL OTTHUMG00000163514.1 1394 542 3 ENSG00000245812.2 RP11-175K6.1 chr5 159100483 159117478 + lincRNA NOVEL OTTHUMG00000163513.1 16996 3214 8 ENSG00000279204.1 RP11-175K6.2 chr5 159106380 159108617 + TEC KNOWN OTTHUMG00000185339.1 2238 2238 1 ENSG00000145860.10 RNF145 chr5 159157409 159210053 - protein_coding KNOWN OTTHUMG00000130306.5 52645 4614 94 ENSG00000253256.1 CTB-11I22.1 chr5 159209921 159248796 + antisense NOVEL OTTHUMG00000163512.1 38876 638 3 ENSG00000253315.1 CTB-11I22.2 chr5 159227715 159245127 + lincRNA NOVEL OTTHUMG00000163520.1 17413 573 3 ENSG00000252458.1 SNORA68 chr5 159230194 159230322 + snoRNA NOVEL NA 129 129 1 ENSG00000266150.1 MIR4711 chr1 59733227 59733296 - miRNA KNOWN NA 70 70 1 ENSG00000280648.1 AC011376.1 chr5 159259744 159259828 - miRNA NOVEL NA 85 85 1 ENSG00000164332.7 UBLCP1 chr5 159263081 159286040 + protein_coding KNOWN OTTHUMG00000130305.3 22960 2676 18 ENSG00000249738.5 AC008697.1 chr5 159310933 159362834 + lincRNA NOVEL OTTHUMG00000163541.1 51902 1990 9 ENSG00000113302.4 IL12B chr5 159314783 159330887 - protein_coding KNOWN OTTHUMG00000130307.2 16105 2761 8 ENSG00000221601.1 RNU4ATAC2P chr5 159318042 159318167 + snRNA KNOWN NA 126 126 1 ENSG00000253298.1 AC008703.1 chr5 159448556 159466276 - lincRNA NOVEL OTTHUMG00000163542.2 17721 2012 7 ENSG00000266432.1 AC008703.2 chr5 159525938 159526010 + miRNA NOVEL NA 73 73 1 ENSG00000254199.1 AC008691.1 chr5 159748233 159761061 - lincRNA NOVEL OTTHUMG00000163543.1 12829 559 4 ENSG00000253311.1 AC011343.1 chr5 159776772 159871384 - lincRNA NOVEL OTTHUMG00000163544.1 94613 5607 3 ENSG00000170214.3 ADRA1B chr5 159916783 159972544 + protein_coding KNOWN OTTHUMG00000130327.1 55762 1738 2 ENSG00000228037.1 RP3-395M20.9 chr1 2581560 2584533 + lincRNA NOVEL OTTHUMG00000000819.1 2974 626 3 ENSG00000226883.1 RP4-782L23.2 chr1 59754747 59789182 - antisense NOVEL OTTHUMG00000008768.1 34436 767 2 ENSG00000248626.1 GAPDHP40 chr5 159950493 159951498 - processed_pseudogene KNOWN OTTHUMG00000159985.1 1006 1006 1 ENSG00000199398.1 Y_RNA chr5 160008445 160008546 + misc_RNA NOVEL NA 102 102 1 ENSG00000113312.9 TTC1 chr5 160009113 160065543 + protein_coding KNOWN OTTHUMG00000130326.3 56431 1938 31 ENSG00000223908.5 AC068657.2 chr5 160023740 160024045 - processed_pseudogene KNOWN OTTHUMG00000163545.3 306 306 1 ENSG00000170234.11 PWWP2A chr5 160061801 160119423 - protein_coding KNOWN OTTHUMG00000163546.3 57623 6510 22 ENSG00000280834.1 U6 chr5 160072268 160072364 + snRNA NOVEL NA 97 97 1 ENSG00000170231.14 FABP6 chr5 160187367 160238735 + protein_coding KNOWN OTTHUMG00000130329.6 51369 1164 20 ENSG00000247699.2 CTB-127C13.1 chr5 160195744 160204826 - antisense NOVEL OTTHUMG00000163565.1 9083 2890 4 ENSG00000253772.1 RP11-34P1.1 chr5 160247517 160248217 + processed_pseudogene KNOWN OTTHUMG00000163539.1 701 701 1 ENSG00000135083.13 CCNJL chr5 160251652 160345396 - protein_coding KNOWN OTTHUMG00000130325.4 93745 4736 42 ENSG00000231816.1 RP4-782L23.1 chr1 59772795 59788848 + lincRNA NOVEL OTTHUMG00000008767.1 16054 547 3 ENSG00000254373.1 RP11-34P1.2 chr5 160258253 160258585 + processed_pseudogene KNOWN OTTHUMG00000163538.1 333 333 1 ENSG00000270612.1 RP11-34P1.4 chr5 160326693 160326969 + processed_pseudogene KNOWN OTTHUMG00000184574.1 277 277 1 ENSG00000145861.7 C1QTNF2 chr5 160347751 160370641 - protein_coding KNOWN OTTHUMG00000130323.2 22891 2414 3 ENSG00000221886.3 ZBED8 chr5 160393148 160400097 - protein_coding KNOWN OTTHUMG00000163554.1 6950 2925 5 ENSG00000164609.8 SLU7 chr5 160401641 160421711 - protein_coding KNOWN OTTHUMG00000130324.2 20071 5082 46 ENSG00000164611.11 PTTG1 chr5 160421822 160428744 + protein_coding KNOWN OTTHUMG00000130328.4 6923 2013 33 ENSG00000253522.3 CTC-231O11.1 chr5 160468268 160487426 + lincRNA NOVEL OTTHUMG00000163553.1 19159 2301 2 ENSG00000265237.1 MIR3142 chr5 160474402 160474483 + miRNA KNOWN NA 82 82 1 ENSG00000277727.1 MIR146A chr5 160485352 160485450 + miRNA KNOWN NA 99 99 1 ENSG00000118322.11 ATP10B chr5 160563120 160852214 - protein_coding KNOWN OTTHUMG00000163551.2 289095 11310 79 ENSG00000134709.9 HOOK1 chr1 59814786 59876378 + protein_coding KNOWN OTTHUMG00000008990.1 61593 6758 59 ENSG00000253687.1 CTC-348L5.1 chr5 160613873 160639183 + antisense NOVEL OTTHUMG00000163561.1 25311 731 2 ENSG00000239192.1 AC011363.1 chr5 160664587 160664681 + miRNA NOVEL NA 95 95 1 ENSG00000254391.1 CTC-529G1.1 chr5 160685351 160692889 + antisense NOVEL OTTHUMG00000163552.1 7539 458 4 ENSG00000253417.4 RP11-109J4.1 chr5 160931778 160938626 - lincRNA NOVEL OTTHUMG00000163562.1 6849 2323 6 ENSG00000221002.1 AC022120.1 chr5 161230050 161230147 - miRNA NOVEL NA 98 98 1 ENSG00000145864.11 GABRB2 chr5 161288429 161549044 - protein_coding KNOWN OTTHUMG00000130349.2 260616 10002 71 ENSG00000145863.9 GABRA6 chr5 161547063 161702593 + protein_coding KNOWN OTTHUMG00000130351.3 155531 3738 49 ENSG00000253403.1 RP11-348M17.2 chr5 161687347 161689408 - antisense NOVEL OTTHUMG00000163585.1 2062 449 2 ENSG00000118990.5 GLRXP3 chr5 161751448 161751768 - processed_pseudogene KNOWN OTTHUMG00000157505.1 321 321 1 ENSG00000022355.13 GABRA1 chr5 161847191 161899969 + protein_coding KNOWN OTTHUMG00000163586.2 52779 5494 58 ENSG00000134716.8 CYP2J2 chr1 59893308 59926790 - protein_coding KNOWN OTTHUMG00000008991.2 33483 2990 40 ENSG00000280776.1 LINC01202 chr5 161910252 162001196 - lincRNA KNOWN OTTHUMG00000189552.1 90945 907 3 ENSG00000113327.13 GABRG2 chr5 162067540 162155536 + protein_coding KNOWN OTTHUMG00000130350.2 87997 4447 56 ENSG00000254173.1 RP11-96G10.1 chr5 162424378 162427345 - lincRNA NOVEL OTTHUMG00000163548.1 2968 600 2 ENSG00000201474.1 RNU6-164P chr5 162477891 162477993 + snRNA KNOWN NA 103 103 1 ENSG00000254186.1 RP11-167P20.1 chr5 162558685 162623461 - lincRNA NOVEL OTTHUMG00000163549.1 64777 736 4 ENSG00000254351.1 ARL2BPP5 chr5 162761833 162762313 + processed_pseudogene KNOWN OTTHUMG00000163550.1 481 481 1 ENSG00000250061.4 RP11-541P9.3 chr5 163012265 163437326 - antisense NOVEL OTTHUMG00000163326.2 425062 1229 14 ENSG00000249449.1 MRPL57P6 chr5 163039291 163039599 + processed_pseudogene KNOWN OTTHUMG00000163327.1 309 309 1 ENSG00000250114.1 CTB-95B16.1 chr5 163416525 163416731 + unprocessed_pseudogene KNOWN OTTHUMG00000163375.1 207 207 1 ENSG00000113328.17 CCNG1 chr5 163437569 163446151 + protein_coding KNOWN OTTHUMG00000130380.7 8583 3096 57 ENSG00000265535.2 RN7SL475P chr1 59974757 59975054 - misc_RNA KNOWN NA 298 298 1 ENSG00000170584.9 NUDCD2 chr5 163446526 163460140 - protein_coding KNOWN OTTHUMG00000130378.3 13615 8847 14 ENSG00000072571.18 HMMR chr5 163460203 163491945 + protein_coding KNOWN OTTHUMG00000130381.6 31743 3936 87 ENSG00000251018.2 HMMR-AS1 chr5 163483065 163494058 - antisense NOVEL OTTHUMG00000163557.1 10994 957 6 ENSG00000038274.15 MAT2B chr5 163503114 163519336 + protein_coding KNOWN OTTHUMG00000130379.5 16223 5153 39 ENSG00000224012.3 RP11-756G12.1 chr5 163709210 163709514 - processed_pseudogene KNOWN OTTHUMG00000162875.1 305 305 1 ENSG00000251998.1 RNU6-168P chr5 163796065 163796165 - snRNA KNOWN NA 101 101 1 ENSG00000273569.1 CTC-320C6.1 chr5 163855140 163856642 - processed_pseudogene KNOWN OTTHUMG00000187644.1 1503 1320 2 ENSG00000271679.1 LSM1P2 chr5 163887506 163887827 - processed_pseudogene KNOWN OTTHUMG00000184369.1 322 322 1 ENSG00000253331.1 CTC-207P7.1 chr5 164119098 164234097 - lincRNA NOVEL OTTHUMG00000162876.1 115000 674 5 ENSG00000253538.1 CTB-32P11.1 chr5 164209631 164211892 + lincRNA NOVEL OTTHUMG00000162874.1 2262 389 2 ENSG00000162598.12 C1orf87 chr1 59987269 60073770 - protein_coding KNOWN OTTHUMG00000008992.2 86502 4422 35 ENSG00000241956.8 CTC-340A15.2 chr5 164296696 165171643 + antisense NOVEL OTTHUMG00000162877.7 874948 6294 68 ENSG00000253236.1 CTD-2313P7.1 chr5 164448422 164467402 - lincRNA NOVEL OTTHUMG00000162886.1 18981 520 4 ENSG00000253600.1 CTC-340A15.1 chr5 164601002 164601452 - processed_pseudogene KNOWN OTTHUMG00000157923.1 451 451 1 ENSG00000206845.1 RNU6-209P chr5 164935162 164935268 - snRNA KNOWN NA 107 107 1 ENSG00000254066.1 CTB-181F24.1 chr5 165220577 165241752 - lincRNA NOVEL OTTHUMG00000163861.1 21176 1947 6 ENSG00000253693.1 CTC-535M15.2 chr5 165349030 165778689 + lincRNA NOVEL OTTHUMG00000163870.1 429660 734 2 ENSG00000252794.1 RN7SKP60 chr5 165609441 165609679 + misc_RNA KNOWN NA 239 239 1 ENSG00000281695.1 AC008562.1 chr5 165754516 165754651 - miRNA NOVEL NA 136 136 1 ENSG00000253512.1 CTC-535M15.1 chr5 165782805 165783134 - processed_pseudogene KNOWN OTTHUMG00000162894.1 330 330 1 ENSG00000253946.1 CTC-425K20.1 chr5 165905126 165905608 + processed_pseudogene KNOWN OTTHUMG00000157926.2 483 483 1 ENSG00000229332.2 PGBD4P8 chr1 60097415 60097976 + processed_pseudogene KNOWN OTTHUMG00000008993.2 562 562 1 ENSG00000254252.1 RPL7P20 chr5 166028567 166029311 - processed_pseudogene KNOWN OTTHUMG00000157934.2 745 745 1 ENSG00000254171.1 RP11-67M9.1 chr5 166128498 166155439 + lincRNA NOVEL OTTHUMG00000163917.1 26942 533 3 ENSG00000277612.1 AC026403.1 chr5 166379124 166379209 - miRNA NOVEL NA 86 86 1 ENSG00000229119.3 CTB-63M22.1 chr5 166382305 166382599 + processed_pseudogene KNOWN OTTHUMG00000162895.1 295 295 1 ENSG00000254130.1 CTB-7E3.1 chr5 166905222 166926370 - lincRNA NOVEL OTTHUMG00000162904.1 21149 566 3 ENSG00000253713.1 CTC-264O10.2 chr5 167116318 167119585 - lincRNA NOVEL OTTHUMG00000163871.1 3268 490 2 ENSG00000253469.1 CTC-264O10.1 chr5 167164934 167168401 - lincRNA NOVEL OTTHUMG00000162918.1 3468 630 2 ENSG00000145934.14 TENM2 chr5 167284799 168264157 + protein_coding KNOWN OTTHUMG00000162928.4 979359 11070 156 ENSG00000254365.1 CTB-180C19.1 chr5 167287320 167294273 - antisense NOVEL OTTHUMG00000163873.1 6954 523 2 ENSG00000254297.1 CTC-286N12.1 chr5 167296234 167303372 - antisense NOVEL OTTHUMG00000162917.1 7139 648 3 ENSG00000238242.1 RP11-575B7.3 chr1 60114875 60149679 + lincRNA NOVEL OTTHUMG00000008994.1 34805 683 3 ENSG00000253527.1 CTB-105L4.2 chr5 167306273 167309870 - antisense NOVEL OTTHUMG00000162919.1 3598 527 3 ENSG00000254187.1 CTB-78F1.1 chr5 167653228 167660481 - antisense NOVEL OTTHUMG00000162925.1 7254 1124 2 ENSG00000253357.1 CTB-78F1.2 chr5 167721363 167729124 + sense_intronic NOVEL OTTHUMG00000163874.1 7762 474 2 ENSG00000221741.1 AC093304.1 chr5 167870545 167870665 - miRNA NOVEL NA 121 121 1 ENSG00000281515.1 AC008464.1 chr5 167914585 167914721 - miRNA NOVEL NA 137 137 1 ENSG00000253660.1 CTC-353G13.1 chr5 167937717 167953469 - antisense NOVEL OTTHUMG00000162966.1 15753 663 4 ENSG00000253947.1 CTB-77H17.1 chr5 167965187 167967086 - antisense NOVEL OTTHUMG00000162965.1 1900 489 2 ENSG00000253065.1 SNORA40 chr5 168033091 168033205 - snoRNA NOVEL NA 115 115 1 ENSG00000253925.1 CTB-178M22.1 chr5 168085329 168187719 - antisense NOVEL OTTHUMG00000162967.1 102391 2181 6 ENSG00000279739.1 CTB-105N12.2 chr5 168128856 168130422 + TEC KNOWN OTTHUMG00000163875.1 1567 1567 1 ENSG00000226476.2 RP11-776H12.1 chr1 60540249 60640491 - lincRNA NOVEL OTTHUMG00000009978.2 100243 1798 8 ENSG00000253978.1 CTB-178M22.2 chr5 168229583 168232357 - antisense NOVEL OTTHUMG00000162964.1 2775 503 3 ENSG00000113645.12 WWC1 chr5 168291651 168472303 + protein_coding KNOWN OTTHUMG00000130408.4 180653 10076 150 ENSG00000113643.7 RARS chr5 168486445 168519299 + protein_coding KNOWN OTTHUMG00000130411.3 32855 3421 63 ENSG00000188573.7 FBLL1 chr5 168529116 168530634 + protein_coding KNOWN OTTHUMG00000157012.4 1519 1519 1 ENSG00000120137.6 PANK3 chr5 168548495 168579600 - protein_coding KNOWN OTTHUMG00000130410.2 31106 10580 15 ENSG00000253861.1 SLC2A3P1 chr5 168552277 168553727 - processed_pseudogene KNOWN OTTHUMG00000163047.1 1451 1451 1 ENSG00000199035.1 MIR103A1 chr5 168560892 168560977 - miRNA KNOWN NA 86 86 1 ENSG00000233913.7 CTC-575D19.1 chr5 168616352 168616996 + processed_pseudogene KNOWN OTTHUMG00000157935.1 645 645 1 ENSG00000254192.1 CTC-558O2.2 chr5 168654513 168667761 + antisense NOVEL OTTHUMG00000163057.1 13249 810 3 ENSG00000184347.13 SLIT3 chr5 168661733 169301129 - protein_coding KNOWN OTTHUMG00000130409.4 639397 14260 144 ENSG00000231252.1 RP11-436K8.1 chr1 60659631 60825584 - lincRNA NOVEL OTTHUMG00000008422.1 165954 2344 6 ENSG00000254042.1 CTC-558O2.1 chr5 168706567 168720884 + antisense NOVEL OTTHUMG00000163055.2 14318 3478 9 ENSG00000207739.1 MIR218-2 chr5 168768146 168768255 - miRNA KNOWN NA 110 110 1 ENSG00000202345.1 Y_RNA chr5 168791498 168791610 + misc_RNA NOVEL NA 113 113 1 ENSG00000248965.1 CTB-174D11.2 chr5 168993000 168995677 + antisense NOVEL OTTHUMG00000163056.1 2678 365 3 ENSG00000279752.1 CTB-174D11.3 chr5 169012148 169013146 - TEC KNOWN OTTHUMG00000163878.1 999 999 1 ENSG00000248222.4 CTB-174D11.1 chr5 169013227 169037998 + antisense NOVEL OTTHUMG00000163054.3 24772 3124 37 ENSG00000207619.1 MIR585 chr5 169263601 169263694 - miRNA KNOWN NA 94 94 1 ENSG00000206614.1 RNU6-477P chr5 169552449 169552555 + snRNA KNOWN NA 107 107 1 ENSG00000040275.15 SPDL1 chr5 169583634 169604778 + protein_coding KNOWN OTTHUMG00000130438.5 21145 4777 85 ENSG00000134516.14 DOCK2 chr5 169637247 170083382 + protein_coding KNOWN OTTHUMG00000130437.4 446136 12890 247 ENSG00000241599.1 RP11-34P13.9 chr1 160446 161525 + lincRNA NOVEL OTTHUMG00000002525.1 1080 457 2 ENSG00000157870.13 FAM213B chr1 2586491 2591469 + protein_coding KNOWN OTTHUMG00000000847.4 4979 3371 89 ENSG00000162599.14 NFIA chr1 60865259 61462793 + protein_coding KNOWN OTTHUMG00000008618.7 597535 10872 108 ENSG00000253269.1 CTB-37A13.1 chr5 169772966 169779365 - antisense NOVEL OTTHUMG00000163084.2 6400 283 2 ENSG00000204767.3 FAM196B chr5 169864264 169980740 - protein_coding KNOWN OTTHUMG00000163083.1 116477 2999 6 ENSG00000216020.2 AC008449.1 chr5 169923460 169923514 - miRNA NOVEL NA 55 55 1 ENSG00000263831.1 MIR378E chr5 170028488 170028566 + miRNA KNOWN NA 79 79 1 ENSG00000168269.8 FOXI1 chr5 170105897 170109725 + protein_coding KNOWN OTTHUMG00000130436.3 3829 2312 4 ENSG00000253219.1 KRT18P41 chr5 170140664 170141940 - processed_pseudogene KNOWN OTTHUMG00000163085.1 1277 1277 1 ENSG00000249601.2 LINC01187 chr5 170191579 170199141 - lincRNA NOVEL OTTHUMG00000163086.1 7563 2314 7 ENSG00000234511.7 C5orf58 chr5 170232447 170252575 + protein_coding KNOWN OTTHUMG00000163122.1 20129 3191 18 ENSG00000043462.10 LCP2 chr5 170246237 170298227 - protein_coding KNOWN OTTHUMG00000163121.2 51991 7244 86 ENSG00000250274.1 CTB-114C7.4 chr5 170308701 170312716 - lincRNA NOVEL OTTHUMG00000163119.1 4016 2182 2 ENSG00000280760.1 AL355795.1 chr1 60915050 60915188 + miRNA NOVEL NA 139 139 1 ENSG00000235172.6 LINC01366 chr5 170331429 170333879 + lincRNA NOVEL OTTHUMG00000163120.1 2451 985 8 ENSG00000182132.11 KCNIP1 chr5 170353487 170736632 + protein_coding KNOWN OTTHUMG00000130442.3 383146 3126 65 ENSG00000145936.7 KCNMB1 chr5 170374671 170389677 - protein_coding KNOWN OTTHUMG00000130439.3 15007 6079 7 ENSG00000253647.1 CTD-2270F17.1 chr5 170389493 170422844 + antisense NOVEL OTTHUMG00000163147.1 33352 1215 3 ENSG00000253858.1 CTB-147C13.1 chr5 170483806 170486407 - antisense NOVEL OTTHUMG00000163146.1 2602 567 2 ENSG00000253591.1 CTC-265N9.1 chr5 170639158 170681437 - antisense NOVEL OTTHUMG00000163148.2 42280 1571 6 ENSG00000253348.1 CTC-455F18.1 chr5 170747047 170788650 - antisense NOVEL OTTHUMG00000163164.2 41604 1191 8 ENSG00000094755.15 GABRP chr5 170763350 170814047 + protein_coding KNOWN OTTHUMG00000130443.3 50698 4621 68 ENSG00000276554.1 AC008514.1 chr5 170767384 170767451 + miRNA NOVEL NA 68 68 1 ENSG00000204764.11 RANBP17 chr5 170861870 171300015 + protein_coding KNOWN OTTHUMG00000163203.3 438146 10993 288 ENSG00000237928.4 NFIA-AS2 chr1 60940239 60970776 - antisense NOVEL OTTHUMG00000008421.2 30538 1843 14 ENSG00000244501.3 RN7SL623P chr5 170866835 170867144 + misc_RNA KNOWN NA 310 310 1 ENSG00000253966.1 CTC-455F18.3 chr5 170896929 170904461 + processed_pseudogene KNOWN OTTHUMG00000163204.1 7533 1337 2 ENSG00000253213.1 RP11-546B8.3 chr5 171251866 171252982 + processed_pseudogene KNOWN OTTHUMG00000163202.1 1117 1117 1 ENSG00000275038.1 RP11-546B8.6 chr5 171305981 171308755 - protein_coding PUTATIVE OTTHUMG00000166260.3 2775 2775 1 ENSG00000164438.5 TLX3 chr5 171309284 171312134 + protein_coding KNOWN OTTHUMG00000163207.3 2851 1493 3 ENSG00000213393.5 RP11-546B8.1 chr5 171345343 171345630 - processed_pseudogene KNOWN OTTHUMG00000157938.1 288 288 1 ENSG00000265740.2 RN7SL339P chr5 171359117 171359412 + misc_RNA KNOWN NA 296 296 1 ENSG00000254256.1 RP11-117L6.1 chr5 171365595 171367693 + processed_pseudogene KNOWN OTTHUMG00000163206.1 2099 872 4 ENSG00000206909.1 SNORA70 chr5 171366118 171366252 + snoRNA NOVEL NA 135 135 1 ENSG00000254012.1 RP11-546B8.5 chr5 171366299 171366611 + processed_pseudogene KNOWN OTTHUMG00000163205.1 313 313 1 ENSG00000270742.1 RP4-802A10.1 chr1 61124733 61125202 + sense_intronic NOVEL OTTHUMG00000185084.1 470 470 1 ENSG00000264249.1 MIR3912 chr5 171386656 171386760 - miRNA KNOWN NA 105 105 1 ENSG00000181163.12 NPM1 chr5 171387116 171411137 + protein_coding KNOWN OTTHUMG00000130465.3 24022 3828 67 ENSG00000156427.7 FGF18 chr5 171419656 171457623 + protein_coding KNOWN OTTHUMG00000130464.2 37968 1986 5 ENSG00000264303.1 AC011410.1 chr5 171770530 171770720 + miRNA NOVEL NA 191 191 1 ENSG00000253110.1 CTB-78H18.1 chr5 171773652 171774739 + lincRNA NOVEL OTTHUMG00000163264.1 1088 705 2 ENSG00000185662.7 SMIM23 chr5 171785872 171794598 + protein_coding KNOWN OTTHUMG00000163266.3 8727 468 9 ENSG00000072803.16 FBXW11 chr5 171861549 172006873 - protein_coding KNOWN OTTHUMG00000163267.2 145325 5577 86 ENSG00000072786.11 STK10 chr5 172042073 172188386 - protein_coding KNOWN OTTHUMG00000163265.3 146314 9083 64 ENSG00000214360.4 EFCAB9 chr5 172194172 172203452 + protein_coding KNOWN OTTHUMG00000163271.1 9281 702 4 ENSG00000168246.5 UBTD2 chr5 172209640 172284071 - protein_coding KNOWN OTTHUMG00000130519.1 74432 3301 3 ENSG00000237853.5 NFIA-AS1 chr1 61248945 61253510 - processed_transcript NOVEL OTTHUMG00000040631.4 4566 842 22 ENSG00000212529.1 SNORA57 chr5 172252334 172252478 - snoRNA NOVEL NA 145 145 1 ENSG00000253218.1 KLF3P1 chr5 172254418 172255439 - processed_pseudogene KNOWN OTTHUMG00000163278.1 1022 1022 1 ENSG00000222732.1 AC008671.1 chr5 172279202 172279315 + miRNA NOVEL NA 114 114 1 ENSG00000174705.10 SH3PXD2B chr5 172325181 172454523 - protein_coding KNOWN OTTHUMG00000163280.3 129343 7977 32 ENSG00000254299.1 CTB-54I1.1 chr5 172557392 172559014 - lincRNA NOVEL OTTHUMG00000163279.1 1623 416 3 ENSG00000280318.1 CTB-79E8.4 chr5 172609094 172609444 - TEC KNOWN OTTHUMG00000187257.1 351 351 1 ENSG00000214357.7 NEURL1B chr5 172641266 172691540 + protein_coding KNOWN OTTHUMG00000163281.2 50275 6424 13 ENSG00000253683.1 CTB-79E8.3 chr5 172656522 172656713 - processed_pseudogene KNOWN OTTHUMG00000163291.1 192 192 1 ENSG00000265160.1 MIR5003 chr5 172662165 172662263 + miRNA KNOWN NA 99 99 1 ENSG00000253445.1 CTB-79E8.2 chr5 172690454 172697720 - antisense NOVEL OTTHUMG00000163289.1 7267 528 2 ENSG00000264551.1 AC099791.1 chr1 61629031 61629121 + miRNA NOVEL NA 91 91 1 ENSG00000253295.1 RP11-779O18.1 chr5 172758226 172762556 + antisense NOVEL OTTHUMG00000163290.1 4331 472 3 ENSG00000213386.3 RP11-779O18.2 chr5 172762521 172763258 - processed_pseudogene KNOWN OTTHUMG00000163292.1 738 738 1 ENSG00000253736.1 RP11-779O18.3 chr5 172762980 172777774 + antisense NOVEL OTTHUMG00000163303.1 14795 352 2 ENSG00000120129.5 DUSP1 chr5 172768090 172771195 - protein_coding KNOWN OTTHUMG00000130523.3 3106 2019 4 ENSG00000206741.1 Y_RNA chr5 172779982 172780094 - misc_RNA NOVEL NA 113 113 1 ENSG00000270243.1 RP11-779O18.4 chr5 172785262 172785424 - processed_pseudogene KNOWN OTTHUMG00000184363.1 163 163 1 ENSG00000253628.1 RP11-536N17.1 chr5 172816621 172819958 + lincRNA NOVEL OTTHUMG00000163302.1 3338 582 2 ENSG00000113719.14 ERGIC1 chr5 172834275 172952685 + protein_coding KNOWN OTTHUMG00000130520.6 118411 14139 66 ENSG00000204758.6 CTC-308K20.1 chr5 172954786 172959392 - antisense NOVEL OTTHUMG00000163304.1 4607 2780 12 ENSG00000254295.1 CTC-308K20.2 chr5 172954907 172957162 + lincRNA NOVEL OTTHUMG00000163301.1 2256 489 3 ENSG00000223920.2 RP11-430G17.1 chr1 61654194 61654908 + processed_pseudogene KNOWN OTTHUMG00000008465.2 715 715 1 ENSG00000037241.6 RPL26L1 chr5 172958729 172969771 + protein_coding KNOWN OTTHUMG00000130517.3 11043 1164 21 ENSG00000253785.1 CTC-308K20.3 chr5 172975511 172976374 + processed_pseudogene KNOWN OTTHUMG00000163310.1 864 864 1 ENSG00000113732.7 ATP6V0E1 chr5 172983757 173035445 + protein_coding KNOWN OTTHUMG00000130518.3 51689 1623 13 ENSG00000254328.1 CTC-308K20.4 chr5 172986680 172987198 + processed_pseudogene KNOWN OTTHUMG00000163323.1 519 182 2 ENSG00000212402.1 SNORA74B chr5 173020728 173020928 + snoRNA KNOWN NA 201 201 1 ENSG00000207210.1 Y_RNA chr5 173052452 173052555 - misc_RNA NOVEL NA 104 104 1 ENSG00000164463.11 CREBRF chr5 173056352 173139284 + protein_coding KNOWN OTTHUMG00000163322.2 82933 12333 29 ENSG00000253439.1 CDC42P5 chr5 173085342 173086210 - processed_pseudogene KNOWN OTTHUMG00000163321.1 869 553 2 ENSG00000253172.1 CTC-209H22.3 chr5 173144162 173145039 - antisense NOVEL OTTHUMG00000163320.1 878 496 2 ENSG00000113734.16 BNIP1 chr5 173144442 173164387 + protein_coding KNOWN OTTHUMG00000130521.4 19946 2440 26 ENSG00000162604.11 TM2D1 chr1 61681046 61725423 - protein_coding KNOWN OTTHUMG00000008466.6 44378 5516 66 ENSG00000281353.1 Metazoa_SRP chr5 173155552 173155834 + misc_RNA NOVEL NA 283 283 1 ENSG00000254200.1 RPL7AP33 chr5 173225836 173226423 - processed_pseudogene KNOWN OTTHUMG00000157942.1 588 588 1 ENSG00000183072.9 NKX2-5 chr5 173232109 173235357 - protein_coding KNOWN OTTHUMG00000130522.4 3249 2094 8 ENSG00000201277.1 Y_RNA chr5 173254190 173254290 - misc_RNA NOVEL NA 101 101 1 ENSG00000252169.1 RNA5SP200 chr5 173292517 173292619 - rRNA KNOWN NA 103 103 1 ENSG00000113739.9 STC2 chr5 173314713 173329503 - protein_coding KNOWN OTTHUMG00000130542.3 14791 6128 15 ENSG00000274994.1 MIR8056 chr5 173347455 173347536 + miRNA KNOWN NA 82 82 1 ENSG00000199219.1 RNU6-500P chr5 173362134 173362240 - snRNA KNOWN NA 107 107 1 ENSG00000253968.1 CTB-32H22.1 chr5 173414035 173451165 + lincRNA NOVEL OTTHUMG00000163340.1 37131 539 4 ENSG00000253141.1 CTB-164N12.1 chr5 173463500 173484584 + lincRNA NOVEL OTTHUMG00000163325.1 21085 1169 6 ENSG00000271200.1 RP11-430G17.3 chr1 61741998 61742424 - lincRNA NOVEL OTTHUMG00000185115.1 427 427 1 ENSG00000253768.1 CTB-33O18.1 chr5 173562478 173573199 + lincRNA NOVEL OTTHUMG00000163338.1 10722 455 3 ENSG00000254164.1 CTB-33O18.2 chr5 173574938 173576275 + lincRNA NOVEL OTTHUMG00000163341.1 1338 457 2 ENSG00000253955.1 CTB-33O18.3 chr5 173579643 173585068 + antisense NOVEL OTTHUMG00000163342.1 5426 3014 6 ENSG00000145919.9 BOD1 chr5 173607514 173616660 - protein_coding KNOWN OTTHUMG00000130540.3 9147 2018 20 ENSG00000253959.1 CTB-43E15.1 chr5 173642519 173658194 + lincRNA NOVEL OTTHUMG00000163339.1 15676 494 2 ENSG00000253428.1 CTB-43E15.2 chr5 173689459 173705849 + lincRNA NOVEL OTTHUMG00000163336.1 16391 513 3 ENSG00000253686.1 LINC01484 chr5 173707614 173746211 - lincRNA NOVEL OTTHUMG00000163343.1 38598 2815 7 ENSG00000263401.1 AC008674.1 chr5 173730078 173730177 + miRNA NOVEL NA 100 100 1 ENSG00000254211.4 LINC01485 chr5 173786790 173809039 - lincRNA NOVEL OTTHUMG00000163337.2 22250 1839 14 ENSG00000113742.11 CPEB4 chr5 173888280 173961976 + protein_coding KNOWN OTTHUMG00000130541.4 73697 10272 67 ENSG00000132849.17 INADL chr1 61742477 62163920 + protein_coding KNOWN OTTHUMG00000008560.6 421444 11436 233 ENSG00000185056.9 C5orf47 chr5 173973779 174006140 + protein_coding KNOWN OTTHUMG00000163349.2 32362 2758 9 ENSG00000253109.1 RP11-619L12.1 chr5 174039751 174040240 - processed_pseudogene KNOWN OTTHUMG00000157945.1 490 490 1 ENSG00000170091.9 HMP19 chr5 174045604 174243501 + protein_coding KNOWN OTTHUMG00000130543.6 197898 3946 40 ENSG00000253244.1 RP11-619L12.3 chr5 174056060 174056585 - antisense NOVEL OTTHUMG00000163446.1 526 289 2 ENSG00000253447.4 RP11-619L12.4 chr5 174081506 174086559 - antisense NOVEL OTTHUMG00000163447.1 5054 689 9 ENSG00000254011.1 CTC-229L21.1 chr5 174173101 174181814 + sense_intronic NOVEL OTTHUMG00000163130.1 8714 436 2 ENSG00000249722.1 CTC-430J12.2 chr5 174329612 174330503 + lincRNA NOVEL OTTHUMG00000163124.1 892 558 2 ENSG00000249306.4 LINC01411 chr5 174336295 174532457 + lincRNA NOVEL OTTHUMG00000163128.1 196163 2445 25 ENSG00000213376.4 GAPDHP71 chr5 174513305 174514307 + processed_pseudogene KNOWN OTTHUMG00000159984.1 1003 1003 1 ENSG00000249031.1 SUMO2P6 chr5 174561776 174562063 + processed_pseudogene KNOWN OTTHUMG00000163126.1 288 288 1 ENSG00000142606.14 MMEL1 chr1 2590639 2632990 - protein_coding KNOWN OTTHUMG00000000846.4 42352 3844 83 ENSG00000200575.1 RNU6-414P chr1 61816419 61816522 + snRNA KNOWN NA 104 104 1 ENSG00000250256.1 RP11-267A15.3 chr5 174618164 174625775 + lincRNA NOVEL OTTHUMG00000163137.1 7612 659 4 ENSG00000248929.1 HIGD1AP3 chr5 174632932 174633209 + processed_pseudogene KNOWN OTTHUMG00000163131.1 278 278 1 ENSG00000120149.8 MSX2 chr5 174724533 174730893 + protein_coding KNOWN OTTHUMG00000130556.5 6361 2270 4 ENSG00000251670.1 CTD-2532K18.1 chr5 174751304 174850725 + lincRNA NOVEL OTTHUMG00000163129.1 99422 457 4 ENSG00000266890.1 MIR4634 chr5 174751734 174751787 + miRNA KNOWN NA 54 54 1 ENSG00000251144.1 CTD-2532K18.2 chr5 174820027 174826324 + lincRNA NOVEL OTTHUMG00000163136.1 6298 287 2 ENSG00000204754.3 CTC-281M20.1 chr5 174919082 174995513 - lincRNA NOVEL OTTHUMG00000163125.1 76432 1925 3 ENSG00000251122.1 NIFKP2 chr5 174923090 174923945 + processed_pseudogene KNOWN OTTHUMG00000163127.1 856 856 1 ENSG00000248293.1 CTC-281M20.3 chr5 174926541 174926717 + unprocessed_pseudogene KNOWN OTTHUMG00000163134.1 177 177 1 ENSG00000249403.1 CTC-281M20.4 chr5 174986295 174987050 + lincRNA NOVEL OTTHUMG00000163132.1 756 342 2 ENSG00000212360.1 RNU6-1177P chr1 61852499 61852602 + snRNA KNOWN NA 104 104 1 ENSG00000248355.1 ARL2BPP6 chr5 175290731 175291252 + processed_pseudogene KNOWN OTTHUMG00000163133.1 522 439 2 ENSG00000184845.3 DRD1 chr5 175440039 175444208 - protein_coding KNOWN OTTHUMG00000130557.2 4170 4054 2 ENSG00000164466.11 SFXN1 chr5 175477062 175529742 + protein_coding KNOWN OTTHUMG00000130555.4 52681 7572 62 ENSG00000270839.1 CTC-571O20.1 chr5 175483595 175484192 - processed_pseudogene KNOWN OTTHUMG00000184371.1 598 598 1 ENSG00000222111.1 RN7SKP148 chr5 175628188 175628462 + misc_RNA KNOWN NA 275 275 1 ENSG00000113749.6 HRH2 chr5 175658030 175686242 + protein_coding KNOWN OTTHUMG00000130660.2 28213 2565 4 ENSG00000200648.1 RNU6-226P chr5 175703898 175704004 + snRNA KNOWN NA 107 107 1 ENSG00000279496.1 CTC-251I16.1 chr5 175709603 175710756 + TEC KNOWN OTTHUMG00000163182.1 1154 1154 1 ENSG00000145920.13 CPLX2 chr5 175796310 175884020 + protein_coding KNOWN OTTHUMG00000130665.2 87711 7099 40 ENSG00000280068.1 RP11-91H12.1 chr5 175903874 175904371 - TEC KNOWN OTTHUMG00000163183.1 498 498 1 ENSG00000236646.1 LAMTOR5P1 chr1 62038842 62039111 + processed_pseudogene KNOWN OTTHUMG00000008916.2 270 270 1 ENSG00000250820.1 RP11-91H12.4 chr5 175906939 175958538 - sense_overlapping NOVEL OTTHUMG00000185647.1 51600 568 2 ENSG00000051596.8 THOC3 chr5 175917873 176034680 - protein_coding KNOWN OTTHUMG00000130658.2 116808 3453 49 ENSG00000266083.1 AC138965.1 chr5 175935209 175935301 - miRNA NOVEL NA 93 93 1 ENSG00000250801.1 RP11-91H12.3 chr5 175972611 175985856 + antisense NOVEL OTTHUMG00000163180.1 13246 793 7 ENSG00000272494.1 OR1X1P chr5 176006145 176007387 + unprocessed_pseudogene KNOWN OTTHUMG00000185807.1 1243 931 2 ENSG00000250992.1 RP11-826N14.1 chr5 176040744 176042878 + antisense NOVEL OTTHUMG00000163179.1 2135 684 2 ENSG00000248469.1 RP11-826N14.2 chr5 176049678 176062021 - antisense NOVEL OTTHUMG00000163185.2 12344 1516 3 ENSG00000182230.10 FAM153B chr5 176060689 176132258 + protein_coding KNOWN OTTHUMG00000163181.5 71570 10769 198 ENSG00000251458.1 RP11-844P9.1 chr5 176124210 176131461 - lincRNA NOVEL OTTHUMG00000163189.1 7252 354 2 ENSG00000251623.1 RP11-826N14.4 chr5 176137157 176155738 + lincRNA NOVEL OTTHUMG00000163178.1 18582 920 5 ENSG00000242860.3 RN7SL180P chr1 62072448 62072741 + misc_RNA KNOWN NA 294 294 1 ENSG00000248596.5 RP11-844P9.2 chr5 176143085 176199295 - lincRNA NOVEL OTTHUMG00000163191.3 56211 5829 55 ENSG00000270989.1 RP11-844P9.4 chr5 176203314 176203710 - processed_pseudogene KNOWN OTTHUMG00000184563.1 397 397 1 ENSG00000170085.16 SIMC1 chr5 176238367 176345991 + protein_coding KNOWN OTTHUMG00000130663.4 107625 5536 65 ENSG00000251667.1 BRCC3P1 chr5 176308063 176309013 + processed_pseudogene KNOWN OTTHUMG00000163184.1 951 951 1 ENSG00000122203.13 KIAA1191 chr5 176346061 176361968 - protein_coding KNOWN OTTHUMG00000130656.3 15908 3973 71 ENSG00000250909.1 RP11-843P14.2 chr5 176347941 176353584 + antisense NOVEL OTTHUMG00000163187.1 5644 504 3 ENSG00000251414.1 RP11-843P14.1 chr5 176354206 176356168 + antisense NOVEL OTTHUMG00000163188.1 1963 528 2 ENSG00000175414.6 ARL10 chr5 176365468 176401865 + protein_coding KNOWN OTTHUMG00000130655.2 36398 11459 10 ENSG00000221464.1 MIR1271 chr5 176367946 176368031 + miRNA KNOWN NA 86 86 1 ENSG00000048162.18 NOP16 chr5 176383938 176388975 - protein_coding KNOWN OTTHUMG00000163186.5 5038 2862 54 ENSG00000263908.1 MIR3116-1 chr1 62078786 62078859 + miRNA KNOWN NA 74 74 1 ENSG00000146066.2 HIGD2A chr5 176388747 176389771 + protein_coding KNOWN OTTHUMG00000130657.1 1025 668 2 ENSG00000175416.11 CLTB chr5 176392455 176416569 - protein_coding KNOWN OTTHUMG00000130662.2 24115 2039 28 ENSG00000280139.1 CTB-162J7.1 chr5 176439090 176439238 + TEC KNOWN OTTHUMG00000173425.1 149 149 1 ENSG00000113194.11 FAF2 chr5 176447628 176510074 + protein_coding KNOWN OTTHUMG00000163228.1 62447 5954 29 ENSG00000221373.1 AC010297.1 chr5 176451762 176451872 + miRNA NOVEL NA 111 111 1 ENSG00000146083.10 RNF44 chr5 176526697 176538025 - protein_coding KNOWN OTTHUMG00000130664.3 11329 5660 41 ENSG00000074276.9 CDHR2 chr5 176542511 176595974 + protein_coding KNOWN OTTHUMG00000163229.1 53464 5348 114 ENSG00000243959.3 RN7SL684P chr5 176547433 176547726 - misc_RNA KNOWN NA 294 294 1 ENSG00000207420.1 Y_RNA chr5 176556704 176556805 + misc_RNA NOVEL NA 102 102 1 ENSG00000169258.6 GPRIN1 chr5 176595802 176610133 - protein_coding KNOWN OTTHUMG00000130659.1 14332 4211 2 ENSG00000234204.1 PIGPP2 chr1 62189131 62189953 + processed_pseudogene KNOWN OTTHUMG00000008913.1 823 458 2 ENSG00000074317.9 SNCB chr5 176620084 176630556 - protein_coding KNOWN OTTHUMG00000130661.2 10473 2006 34 ENSG00000266329.1 MIR4281 chr5 176629439 176629500 - miRNA KNOWN NA 62 62 1 ENSG00000175766.10 EIF4E1B chr5 176630682 176646641 + protein_coding KNOWN OTTHUMG00000163227.1 15960 3296 47 ENSG00000048140.16 TSPAN17 chr5 176647387 176659054 + protein_coding KNOWN OTTHUMG00000163230.2 11668 5215 70 ENSG00000248484.1 RP11-375B1.1 chr5 176707356 176726243 - lincRNA NOVEL OTTHUMG00000163224.1 18888 578 2 ENSG00000251446.1 RP11-375B1.2 chr5 176726942 176739458 - lincRNA NOVEL OTTHUMG00000163226.1 12517 553 4 ENSG00000248859.2 LINC01574 chr5 176743205 176743871 + lincRNA NOVEL OTTHUMG00000163231.2 667 560 2 ENSG00000113763.9 UNC5A chr5 176810477 176880895 + protein_coding KNOWN OTTHUMG00000163225.1 70419 4356 31 ENSG00000160883.9 HK3 chr5 176880869 176899332 - protein_coding KNOWN OTTHUMG00000130855.2 18464 3290 42 ENSG00000087206.15 UIMC1 chr5 176905005 177022633 - protein_coding KNOWN OTTHUMG00000130852.2 117629 4739 107 ENSG00000234088.1 RPS15AP7 chr1 62190522 62190926 + processed_pseudogene KNOWN OTTHUMG00000008912.1 405 405 1 ENSG00000113761.10 ZNF346 chr5 177022696 177081189 + protein_coding KNOWN OTTHUMG00000130848.2 58494 4686 53 ENSG00000251666.1 ZNF346-IT1 chr5 177051714 177052963 + sense_intronic NOVEL OTTHUMG00000163314.1 1250 745 2 ENSG00000160867.13 FGFR4 chr5 177086886 177098144 + protein_coding KNOWN OTTHUMG00000151523.4 11259 4829 117 ENSG00000165671.17 NSD1 chr5 177133025 177300215 + protein_coding KNOWN OTTHUMG00000130846.4 167191 15242 114 ENSG00000240729.1 CTD-2301A4.3 chr5 177264766 177265241 + processed_pseudogene KNOWN OTTHUMG00000157950.1 476 476 1 ENSG00000270706.1 PRMT1P1 chr5 177265580 177266588 - processed_pseudogene KNOWN OTTHUMG00000184564.1 1009 1009 1 ENSG00000169228.12 RAB24 chr5 177301198 177303744 - protein_coding KNOWN OTTHUMG00000130849.4 2547 2065 51 ENSG00000213347.9 MXD3 chr5 177301461 177312757 - protein_coding KNOWN OTTHUMG00000130854.2 11297 5154 52 ENSG00000169230.8 PRELID1 chr5 177303774 177306959 + protein_coding KNOWN OTTHUMG00000130847.2 3186 1875 31 ENSG00000169223.13 LMAN2 chr5 177331562 177351852 - protein_coding KNOWN OTTHUMG00000130860.2 20291 2357 45 ENSG00000240563.1 L1TD1 chr1 62194831 62212328 + protein_coding KNOWN OTTHUMG00000008914.1 17498 3849 4 ENSG00000239393.1 CTD-2301A4.1 chr5 177346073 177346426 + processed_pseudogene KNOWN OTTHUMG00000157947.1 354 354 1 ENSG00000169220.16 RGS14 chr5 177357837 177372601 + protein_coding KNOWN OTTHUMG00000163324.1 14765 3797 72 ENSG00000131183.9 SLC34A1 chr5 177379235 177398848 + protein_coding KNOWN OTTHUMG00000130857.2 19614 4529 40 ENSG00000196570.2 PFN3 chr5 177400107 177400636 - protein_coding KNOWN OTTHUMG00000163408.1 530 530 1 ENSG00000131187.8 F12 chr5 177402140 177409576 - protein_coding KNOWN OTTHUMG00000163403.1 7437 2769 33 ENSG00000198055.9 GRK6 chr5 177403204 177442901 + protein_coding KNOWN OTTHUMG00000163401.2 39698 4355 120 ENSG00000246334.2 PRR7-AS1 chr5 177438503 177447699 - antisense NOVEL OTTHUMG00000163400.1 9197 1701 11 ENSG00000131188.10 PRR7 chr5 177446445 177456286 + protein_coding KNOWN OTTHUMG00000130861.3 9842 1772 13 ENSG00000113758.12 DBN1 chr5 177456608 177474401 - protein_coding KNOWN OTTHUMG00000130856.6 17794 5119 91 ENSG00000279821.1 RP11-1334A24.5 chr5 177476631 177479656 - TEC KNOWN OTTHUMG00000163397.1 3026 3026 1 ENSG00000237227.1 RP5-1155K23.4 chr1 62208136 62208442 - processed_pseudogene KNOWN OTTHUMG00000008915.1 307 307 1 ENSG00000196923.12 PDLIM7 chr5 177483394 177497606 - protein_coding KNOWN OTTHUMG00000130853.9 14213 4407 117 ENSG00000248996.1 RP11-1334A24.6 chr5 177494995 177503647 + antisense NOVEL OTTHUMG00000163398.1 8653 434 2 ENSG00000146094.12 DOK3 chr5 177501907 177511274 - protein_coding KNOWN OTTHUMG00000130850.4 9368 4821 53 ENSG00000183258.10 DDX41 chr5 177511577 177517469 - protein_coding KNOWN OTTHUMG00000130858.2 5893 4536 146 ENSG00000146067.14 FAM193B chr5 177519788 177554541 - protein_coding KNOWN OTTHUMG00000163396.4 34754 5804 90 ENSG00000272459.1 RP11-1277A3.3 chr5 177554824 177555364 + lincRNA NOVEL OTTHUMG00000185636.1 541 541 1 ENSG00000184840.10 TMED9 chr5 177592158 177596124 + protein_coding KNOWN OTTHUMG00000130859.2 3967 2440 21 ENSG00000027847.12 B4GALT7 chr5 177600100 177610347 + protein_coding KNOWN OTTHUMG00000130851.2 10248 4927 30 ENSG00000247679.2 RP11-1277A3.1 chr5 177611253 177619754 + antisense NOVEL OTTHUMG00000163407.1 8502 1751 3 ENSG00000246596.5 RP11-1277A3.2 chr5 177619059 177672209 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000163399.1 53151 1691 10 ENSG00000200174.1 Y_RNA chr1 62211557 62211666 + misc_RNA NOVEL NA 110 110 1 ENSG00000249849.1 RP11-1101H11.1 chr5 177682294 177713969 + antisense NOVEL OTTHUMG00000163405.1 31676 431 3 ENSG00000170074.18 FAM153A chr5 177707981 177783398 - protein_coding KNOWN OTTHUMG00000163394.3 75418 8528 212 ENSG00000249109.1 RP11-1026M7.2 chr5 177782197 177794396 + antisense NOVEL OTTHUMG00000163404.1 12200 1517 3 ENSG00000248943.1 RP11-1026M7.3 chr5 177801204 177803344 - lincRNA NOVEL OTTHUMG00000163395.1 2141 684 2 ENSG00000170089.14 RP11-423H2.1 chr5 177809407 177950732 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000163406.3 141326 3852 52 ENSG00000214351.5 OR1X5P chr5 177836434 177837646 - unprocessed_pseudogene KNOWN OTTHUMG00000154337.1 1213 894 2 ENSG00000249186.1 RP11-423H2.5 chr5 177857945 177871194 - antisense NOVEL OTTHUMG00000163461.1 13250 793 7 ENSG00000221204.1 AC106795.1 chr5 177908465 177908557 + miRNA NOVEL NA 93 93 1 ENSG00000250101.1 RP11-1252I4.2 chr5 177939622 177983054 + lincRNA NOVEL OTTHUMG00000163457.1 43433 547 2 ENSG00000249684.4 RP11-423H2.3 chr5 177950335 177963960 + antisense NOVEL OTTHUMG00000163453.1 13626 1421 12 ENSG00000237058.1 RP13-436F16.1 chr1 2632568 2636620 + antisense NOVEL OTTHUMG00000039631.1 4053 373 2 ENSG00000132854.17 KANK4 chr1 62236979 62319414 - protein_coding KNOWN OTTHUMG00000008971.1 82436 5980 30 ENSG00000280207.1 RP11-423H2.4 chr5 177967004 177967457 + lincRNA NOVEL OTTHUMG00000163454.1 454 454 1 ENSG00000249129.1 SUDS3P1 chr5 177971316 177972281 + processed_pseudogene KNOWN OTTHUMG00000163458.2 966 966 1 ENSG00000175325.2 PROP1 chr5 177992235 177996242 - protein_coding KNOWN OTTHUMG00000130887.1 4008 1464 3 ENSG00000204677.9 FAM153C chr5 178006405 178055559 + protein_coding KNOWN OTTHUMG00000163459.1 49155 4285 87 ENSG00000218227.3 RP11-889L3.1 chr5 178055604 178056194 + processed_pseudogene KNOWN OTTHUMG00000157953.1 591 591 1 ENSG00000145911.5 N4BP3 chr5 178113443 178126087 + protein_coding KNOWN OTTHUMG00000163456.2 12645 6080 5 ENSG00000145916.17 RMND5B chr5 178130996 178150565 + protein_coding KNOWN OTTHUMG00000130897.2 19570 7701 82 ENSG00000145912.7 NHP2 chr5 178149460 178153967 - protein_coding KNOWN OTTHUMG00000130886.4 4508 1510 18 ENSG00000251211.1 RP11-889L3.4 chr5 178165702 178166562 + processed_pseudogene KNOWN OTTHUMG00000163455.1 861 861 1 ENSG00000244234.1 GMCL1P1 chr5 178185719 178187299 - processed_pseudogene KNOWN OTTHUMG00000130894.4 1581 1581 1 ENSG00000201153.1 RNU6-371P chr1 62298149 62298256 - snRNA KNOWN NA 108 108 1 ENSG00000197451.9 HNRNPAB chr5 178204507 178211180 + protein_coding KNOWN OTTHUMG00000163452.1 6674 2161 64 ENSG00000175309.13 PHYKPL chr5 178208497 178232791 - protein_coding KNOWN OTTHUMG00000130892.4 24295 8402 128 ENSG00000050767.14 COL23A1 chr5 178237618 178590555 - protein_coding KNOWN OTTHUMG00000130890.3 352938 3586 58 ENSG00000271681.1 RP11-1259L22.2 chr5 178344843 178345316 + processed_pseudogene KNOWN OTTHUMG00000184528.1 474 474 1 ENSG00000253698.1 RP11-1259L22.1 chr5 178350867 178352250 + antisense NOVEL OTTHUMG00000163571.1 1384 666 2 ENSG00000242341.3 RN7SL646P chr5 178377924 178378220 + misc_RNA KNOWN NA 297 297 1 ENSG00000245688.1 CTB-26E19.1 chr5 178438681 178443094 - sense_intronic NOVEL OTTHUMG00000163611.1 4414 1458 2 ENSG00000113240.11 CLK4 chr5 178602664 178630615 - protein_coding KNOWN OTTHUMG00000130893.3 27952 7924 115 ENSG00000252464.1 RN7SKP70 chr5 178619728 178619998 - misc_RNA KNOWN NA 271 271 1 ENSG00000169131.9 ZNF354A chr5 178711592 178730702 - protein_coding KNOWN OTTHUMG00000130895.2 19111 2947 14 ENSG00000162607.11 USP1 chr1 62436297 62451804 + protein_coding KNOWN OTTHUMG00000008972.3 15508 4263 26 ENSG00000250420.7 AACSP1 chr5 178764861 178818435 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000163584.3 53575 3380 22 ENSG00000274813.1 RP11-21I4.3 chr5 178825382 178825571 + unprocessed_pseudogene KNOWN OTTHUMG00000187645.1 190 190 1 ENSG00000253725.1 RP11-21I4.2 chr5 178840097 178841134 + processed_pseudogene KNOWN OTTHUMG00000163581.1 1038 1038 1 ENSG00000278441.1 RP11-21I4.4 chr5 178842028 178842235 - processed_pseudogene KNOWN OTTHUMG00000187646.1 208 208 1 ENSG00000178338.9 ZNF354B chr5 178859953 178888122 + protein_coding KNOWN OTTHUMG00000130896.3 28170 3750 15 ENSG00000206624.1 RNU1-39P chr5 178884715 178884879 + snRNA KNOWN NA 165 165 1 ENSG00000198939.6 ZFP2 chr5 178895894 178933212 + protein_coding KNOWN OTTHUMG00000130885.3 37319 2641 24 ENSG00000213328.3 RP11-281O15.2 chr5 178909710 178910609 - processed_pseudogene KNOWN OTTHUMG00000163583.1 900 900 1 ENSG00000253869.1 PIGFP1 chr5 178922064 178922716 + processed_pseudogene KNOWN OTTHUMG00000163582.1 653 653 1 ENSG00000272431.1 RP11-281O15.8 chr5 178938677 178939223 - lincRNA NOVEL OTTHUMG00000185637.1 547 547 1 ENSG00000116641.14 DOCK7 chr1 62454728 62688368 - protein_coding KNOWN OTTHUMG00000013131.1 233641 10943 177 ENSG00000178187.6 ZNF454 chr5 178941191 178966433 + protein_coding KNOWN OTTHUMG00000130891.2 25243 2662 14 ENSG00000254035.1 RP11-281O15.4 chr5 178969390 178990116 + antisense NOVEL OTTHUMG00000163579.1 20727 674 2 ENSG00000113262.13 GRM6 chr5 178978327 178996206 - protein_coding KNOWN OTTHUMG00000130889.3 17880 6695 27 ENSG00000254158.1 RP11-281O15.5 chr5 178997969 178998815 - processed_pseudogene KNOWN OTTHUMG00000163578.1 847 847 1 ENSG00000234284.5 ZNF879 chr5 179023752 179035064 + protein_coding KNOWN OTTHUMG00000163596.1 11313 3883 17 ENSG00000177932.6 ZNF354C chr5 179060415 179083537 + protein_coding KNOWN OTTHUMG00000130888.2 23123 5411 5 ENSG00000253144.1 RP11-281O15.7 chr5 179082680 179083194 - processed_pseudogene KNOWN OTTHUMG00000163598.2 515 515 1 ENSG00000087116.12 ADAMTS2 chr5 179110851 179345430 - protein_coding KNOWN OTTHUMG00000130915.3 234580 7687 40 ENSG00000253979.1 RP11-443C10.2 chr5 179377505 179378865 + lincRNA NOVEL OTTHUMG00000163594.1 1361 360 2 ENSG00000253163.1 RP11-443C10.1 chr5 179377531 179378761 - lincRNA NOVEL OTTHUMG00000163595.1 1231 624 2 ENSG00000270549.1 RP11-293K19.1 chr1 62530636 62530873 + processed_pseudogene KNOWN OTTHUMG00000184290.1 238 238 1 ENSG00000253617.2 RP11-443C10.3 chr5 179385819 179385992 - processed_pseudogene KNOWN OTTHUMG00000163597.2 174 174 1 ENSG00000250674.1 RP11-798K23.1 chr5 179455415 179456095 + lincRNA NOVEL OTTHUMG00000163201.1 681 561 2 ENSG00000274716.1 U4 chr5 179492076 179492157 - snRNA NOVEL NA 82 82 1 ENSG00000253652.1 RP11-798K23.4 chr5 179503322 179515579 - lincRNA NOVEL OTTHUMG00000163567.1 12258 535 2 ENSG00000251545.2 RP11-798K23.3 chr5 179522457 179525074 + unprocessed_pseudogene KNOWN OTTHUMG00000163210.2 2618 1142 4 ENSG00000253520.1 RP11-798K23.5 chr5 179527224 179527513 - processed_pseudogene KNOWN OTTHUMG00000163568.1 290 290 1 ENSG00000176783.13 RUFY1 chr5 179550558 179610026 + protein_coding KNOWN OTTHUMG00000130913.9 59469 5911 120 ENSG00000249140.1 PRDX2P3 chr5 179572156 179572741 + processed_pseudogene KNOWN OTTHUMG00000163176.2 586 586 1 ENSG00000244945.1 RP11-1379J22.2 chr5 179595904 179603741 - antisense NOVEL OTTHUMG00000163175.1 7838 1966 9 ENSG00000169045.16 HNRNPH1 chr5 179614178 179634784 - protein_coding KNOWN OTTHUMG00000130908.42 20607 9480 281 ENSG00000132855.4 ANGPTL3 chr1 62597487 62606159 + protein_coding KNOWN OTTHUMG00000009146.2 8673 3250 12 ENSG00000273549.1 Metazoa_SRP chr5 179629151 179629410 + misc_RNA NOVEL NA 260 260 1 ENSG00000204661.8 C5orf60 chr5 179641544 179645046 - protein_coding KNOWN OTTHUMG00000163221.4 3503 3284 37 ENSG00000228259.3 RP11-1379J22.7 chr5 179651284 179652457 + unprocessed_pseudogene KNOWN OTTHUMG00000187266.2 1174 951 5 ENSG00000250999.1 RP11-1379J22.5 chr5 179657762 179664432 + antisense NOVEL OTTHUMG00000163211.2 6671 821 7 ENSG00000204659.4 CBY3 chr5 179678583 179680974 - protein_coding KNOWN OTTHUMG00000163163.1 2392 785 2 ENSG00000127022.13 CANX chr5 179678628 179730925 + protein_coding KNOWN OTTHUMG00000130910.10 52298 6235 129 ENSG00000225051.5 HMGB3P22 chr5 179679032 179694768 + transcribed_processed_pseudogene KNOWN OTTHUMG00000163166.2 15737 825 3 ENSG00000161021.10 MAML1 chr5 179732850 179796511 + protein_coding KNOWN OTTHUMG00000163237.3 63662 10690 15 ENSG00000213316.8 LTC4S chr5 179793980 179796647 + protein_coding KNOWN OTTHUMG00000150314.3 2668 1192 30 ENSG00000161013.15 MGAT4B chr5 179797597 179806952 - protein_coding KNOWN OTTHUMG00000130912.5 9356 5495 158 ENSG00000278967.1 RP5-849H19.3 chr1 62607766 62609584 + TEC KNOWN OTTHUMG00000187053.1 1819 1819 1 ENSG00000221394.1 MIR1229 chr5 179798278 179798346 - miRNA KNOWN NA 69 69 1 ENSG00000161011.18 SQSTM1 chr5 179806398 179838078 + protein_coding KNOWN OTTHUMG00000150643.78 31681 7654 67 ENSG00000161010.13 C5orf45 chr5 179835133 179862173 - protein_coding KNOWN OTTHUMG00000163490.7 27041 8496 126 ENSG00000222448.1 RN7SKP150 chr5 179845832 179846152 + misc_RNA KNOWN NA 321 321 1 ENSG00000252202.1 Y_RNA chr5 179847035 179847130 - misc_RNA NOVEL NA 96 96 1 ENSG00000245317.2 CTC-241N9.1 chr5 179859013 179861283 + lincRNA NOVEL OTTHUMG00000163262.1 2271 1454 2 ENSG00000197226.11 TBC1D9B chr5 179862066 179907859 - protein_coding KNOWN OTTHUMG00000130911.9 45794 11473 108 ENSG00000113269.12 RNF130 chr5 179911651 180072118 - protein_coding KNOWN OTTHUMG00000130909.6 160468 12822 44 ENSG00000242979.1 RPS15AP18 chr5 179933805 179934196 - processed_pseudogene KNOWN OTTHUMG00000157956.1 392 392 1 ENSG00000281431.1 Metazoa_SRP chr5 179936285 179936527 - misc_RNA NOVEL NA 243 243 1 ENSG00000213703.2 RP5-849H19.2 chr1 62641122 62641667 - processed_pseudogene KNOWN OTTHUMG00000009137.1 546 546 1 ENSG00000249876.1 CTC-563A5.4 chr5 179939457 179940132 - processed_pseudogene KNOWN OTTHUMG00000163489.1 676 676 1 ENSG00000249412.1 CTC-563A5.2 chr5 179963615 179964419 + antisense NOVEL OTTHUMG00000163263.1 805 569 2 ENSG00000198995.2 MIR340 chr5 180015292 180015402 - miRNA KNOWN NA 111 111 1 ENSG00000278965.1 RP11-39H3.2 chr5 180078357 180081691 - TEC KNOWN OTTHUMG00000173433.1 3335 3335 1 ENSG00000253480.1 RP11-39H3.1 chr5 180085717 180087038 - processed_pseudogene KNOWN OTTHUMG00000163507.1 1322 1015 2 ENSG00000146090.14 RASGEF1C chr5 180100791 180209153 - protein_coding KNOWN OTTHUMG00000130914.7 108363 2961 76 ENSG00000229721.3 RP11-252I14.1 chr5 180226378 180227000 - processed_pseudogene KNOWN OTTHUMG00000157961.1 623 623 1 ENSG00000050748.16 MAPK9 chr5 180233143 180292099 - protein_coding KNOWN OTTHUMG00000130934.9 58957 8955 109 ENSG00000253908.1 RP11-252I14.2 chr5 180257680 180258366 + processed_pseudogene KNOWN OTTHUMG00000163508.1 687 687 1 ENSG00000248367.1 CTB-129O4.1 chr5 180293245 180295253 + antisense NOVEL OTTHUMG00000163311.1 2009 393 2 ENSG00000235545.1 RP11-230B22.1 chr1 62688482 62710694 + antisense NOVEL OTTHUMG00000009136.1 22213 1228 2 ENSG00000131459.11 GFPT2 chr5 180300690 180353387 - protein_coding KNOWN OTTHUMG00000163442.4 52698 4780 46 ENSG00000250509.1 CTC-573N18.1 chr5 180441559 180443238 + lincRNA NOVEL OTTHUMG00000163288.1 1680 806 2 ENSG00000200555.1 RNU6-525P chr5 180444509 180444612 + snRNA KNOWN NA 104 104 1 ENSG00000113300.10 CNOT6 chr5 180494412 180578405 + protein_coding KNOWN OTTHUMG00000130935.2 83994 6586 53 ENSG00000250749.1 RP11-451H23.1 chr5 180534184 180534642 - processed_pseudogene KNOWN OTTHUMG00000163293.1 459 459 1 ENSG00000263759.1 AC122714.1 chr5 180582445 180582530 + miRNA NOVEL NA 86 86 1 ENSG00000161055.3 SCGB3A1 chr5 180590103 180591540 - protein_coding KNOWN OTTHUMG00000130936.3 1438 846 5 ENSG00000037280.14 FLT4 chr5 180601506 180649624 - protein_coding KNOWN OTTHUMG00000130931.6 48119 8852 181 ENSG00000251352.1 RP11-451H23.2 chr5 180671892 180672598 - processed_pseudogene KNOWN OTTHUMG00000163294.1 707 707 1 ENSG00000248717.1 RP11-451H23.3 chr5 180684766 180686546 + lincRNA NOVEL OTTHUMG00000163295.1 1781 1039 2 ENSG00000125703.13 ATG4C chr1 62784135 62865513 + protein_coding KNOWN OTTHUMG00000009142.3 81379 3110 37 ENSG00000236791.2 OR2AI1P chr5 180692832 180693763 - unprocessed_pseudogene KNOWN OTTHUMG00000163300.1 932 932 1 ENSG00000199892.2 RNU1-17P chr5 180729586 180729737 + snRNA KNOWN NA 152 152 1 ENSG00000174339.2 OR2Y1 chr5 180739042 180740099 - protein_coding KNOWN OTTHUMG00000162237.2 1058 1058 1 ENSG00000260841.1 CTC-205M6.5 chr5 180784782 180787869 - sense_overlapping NOVEL OTTHUMG00000173461.1 3088 3088 1 ENSG00000131446.14 MGAT1 chr5 180790541 180815652 - protein_coding KNOWN OTTHUMG00000130937.4 25112 5817 59 ENSG00000280161.1 CTC-205M6.1 chr5 180810401 180811384 + TEC KNOWN OTTHUMG00000162253.1 984 984 1 ENSG00000278970.1 HEIH chr5 180829954 180831605 - TEC KNOWN OTTHUMG00000162271.1 1652 1652 1 ENSG00000245060.5 LINC00847 chr5 180830957 180835726 + lincRNA NOVEL OTTHUMG00000162270.1 4770 2453 13 ENSG00000196670.12 ZFP62 chr5 180847611 180861285 - protein_coding KNOWN OTTHUMG00000162273.3 13675 4197 19 ENSG00000113303.10 BTNL8 chr5 180899077 180950906 + protein_coding KNOWN OTTHUMG00000130932.2 51830 3924 71 ENSG00000215912.10 TTC34 chr1 2635976 2801721 - protein_coding KNOWN OTTHUMG00000000539.8 165746 5900 17 ENSG00000234318.1 RP4-771M4.3 chr1 62896009 62901639 + lincRNA NOVEL OTTHUMG00000057525.1 5631 447 2 ENSG00000222852.1 Y_RNA chr5 180909838 180909927 + misc_RNA NOVEL NA 90 90 1 ENSG00000243664.1 RPS29P12 chr5 180945756 180945907 + processed_pseudogene KNOWN OTTHUMG00000157973.1 152 152 1 ENSG00000249287.1 CTD-2593A12.3 chr5 180967189 180970762 - processed_pseudogene KNOWN OTTHUMG00000162083.1 3574 1195 2 ENSG00000248761.1 CTD-2593A12.2 chr5 180967848 180968567 + processed_pseudogene KNOWN OTTHUMG00000162082.2 720 720 1 ENSG00000231228.4 CTD-2593A12.4 chr5 180982273 180982611 + processed_pseudogene KNOWN OTTHUMG00000162090.1 339 339 1 ENSG00000168903.8 BTNL3 chr5 180988845 181006727 + protein_coding KNOWN OTTHUMG00000162091.2 17883 2440 8 ENSG00000206686.1 RNU6-1036P chr5 181007281 181007384 + snRNA KNOWN NA 104 104 1 ENSG00000165810.15 BTNL9 chr5 181040225 181061523 + protein_coding KNOWN OTTHUMG00000133152.4 21299 5565 53 ENSG00000277912.1 MIR8089 chr5 181043403 181043484 - miRNA KNOWN NA 82 82 1 ENSG00000241870.1 CTB-14A14.1 chr5 181065086 181065677 + processed_pseudogene KNOWN OTTHUMG00000157968.1 592 592 1 ENSG00000237163.1 RP4-771M4.2 chr1 62905180 62905482 + processed_pseudogene KNOWN OTTHUMG00000009139.1 303 303 1 ENSG00000214295.4 FOXO1B chr5 181099140 181100666 - processed_pseudogene KNOWN OTTHUMG00000162117.2 1527 1527 1 ENSG00000248560.1 CTB-14A14.2 chr5 181114106 181115674 + processed_pseudogene KNOWN OTTHUMG00000162100.1 1569 1569 1 ENSG00000185372.2 OR2V1 chr5 181124357 181125304 - protein_coding KNOWN OTTHUMG00000162118.1 948 948 1 ENSG00000182613.1 OR2V2 chr5 181154943 181155890 + protein_coding KNOWN OTTHUMG00000130933.1 948 948 1 ENSG00000248473.1 CTC-338M12.2 chr5 181191046 181191852 - lincRNA NOVEL OTTHUMG00000162379.1 807 411 2 ENSG00000250222.1 CTC-338M12.5 chr5 181191924 181194429 + antisense NOVEL OTTHUMG00000163004.1 2506 486 5 ENSG00000146054.16 TRIM7 chr5 181193924 181205293 - protein_coding KNOWN OTTHUMG00000130963.7 11370 7338 32 ENSG00000250900.5 CTC-338M12.6 chr5 181195496 181203103 + antisense NOVEL OTTHUMG00000163005.3 7608 1484 13 ENSG00000248514.1 CTC-338M12.1 chr5 181205361 181206120 - antisense NOVEL OTTHUMG00000162378.1 760 456 2 ENSG00000146063.17 TRIM41 chr5 181222499 181235809 + protein_coding KNOWN OTTHUMG00000130965.8 13311 12803 46 ENSG00000229537.4 RP11-5P4.1 chr1 63000497 63012471 - lincRNA NOVEL OTTHUMG00000009147.1 11975 676 6 ENSG00000264732.1 MIR4638 chr5 181222566 181222633 - miRNA KNOWN NA 68 68 1 ENSG00000247049.2 CTC-338M12.7 chr5 181224646 181230685 - antisense NOVEL OTTHUMG00000163016.1 6040 566 2 ENSG00000204628.10 GNB2L1 chr5 181236909 181248096 - protein_coding KNOWN OTTHUMG00000163380.13 11188 5990 182 ENSG00000272296.1 SNORD96A chr5 181241814 181241892 - snoRNA KNOWN NA 79 79 1 ENSG00000264549.1 SNORD95 chr5 181243312 181243379 - snoRNA KNOWN NA 68 68 1 ENSG00000233937.5 CTC-338M12.4 chr5 181246523 181272167 + processed_transcript NOVEL OTTHUMG00000163003.3 25645 3312 12 ENSG00000183718.5 TRIM52 chr5 181254417 181261139 - protein_coding KNOWN OTTHUMG00000130964.7 6723 6562 11 ENSG00000248275.1 TRIM52-AS1 chr5 181261212 181272307 + processed_transcript NOVEL OTTHUMG00000163002.4 11096 1316 10 ENSG00000248103.1 CTC-338M12.9 chr5 181281375 181283652 + lincRNA NOVEL OTTHUMG00000163377.1 2278 549 2 ENSG00000274525.1 CTC-338M12.13 chr5 181291673 181295572 + unprocessed_pseudogene KNOWN OTTHUMG00000187650.1 3900 246 3 ENSG00000227485.1 RP11-5P4.2 chr1 63024207 63025658 + lincRNA NOVEL OTTHUMG00000009148.1 1452 359 2 ENSG00000222533.1 RNU6-705P chr5 181301967 181302070 + snRNA KNOWN NA 104 104 1 ENSG00000238035.7 AC138035.2 chr5 181306502 181324685 + lincRNA NOVEL OTTHUMG00000184458.1 18184 1838 18 ENSG00000274553.1 AC138035.3 chr5 181329049 181331839 - processed_pseudogene KNOWN OTTHUMG00000187652.1 2791 2791 1 ENSG00000250765.4 AC138035.1 chr5 181329241 181342213 + lincRNA NOVEL OTTHUMG00000162985.1 12973 727 7 ENSG00000230178.1 OR4F3 chr5 181367268 181368262 + protein_coding KNOWN OTTHUMG00000162081.1 995 995 1 ENSG00000251035.1 WBP1LP4 chr5 181378695 181379038 - processed_pseudogene KNOWN OTTHUMG00000162075.1 344 344 1 ENSG00000213285.4 AC138031.1 chr5 181471963 181472430 + processed_pseudogene KNOWN OTTHUMG00000157971.1 468 468 1 ENSG00000271530.1 WBP1LP12 chr6 95124 95454 + processed_pseudogene KNOWN OTTHUMG00000184610.1 331 331 1 ENSG00000220212.1 OR4F1P chr6 105919 106856 - unprocessed_pseudogene KNOWN OTTHUMG00000014107.1 938 938 1 ENSG00000170590.7 LINC00266-3 chr6 131910 144885 - lincRNA NOVEL OTTHUMG00000014109.2 12976 727 7 ENSG00000229225.1 RP11-5P4.3 chr1 63078081 63079031 - lincRNA NOVEL OTTHUMG00000013351.1 951 157 2 ENSG00000217929.3 CICP18 chr6 142272 145083 - processed_pseudogene KNOWN OTTHUMG00000014108.3 2812 2812 1 ENSG00000218577.1 RP3-416J7.1 chr6 167607 170631 - unprocessed_pseudogene KNOWN OTTHUMG00000014112.1 3025 709 3 ENSG00000263667.1 RP3-416J7.4 chr6 181466 205484 - lincRNA NOVEL OTTHUMG00000179310.1 24019 2050 8 ENSG00000205653.1 RP3-416J7.5 chr6 203313 206392 + lincRNA NOVEL OTTHUMG00000179311.1 3080 2007 2 ENSG00000112679.13 DUSP22 chr6 291630 351355 + protein_coding KNOWN OTTHUMG00000014113.2 59726 5686 80 ENSG00000137265.13 IRF4 chr6 391739 411447 + protein_coding KNOWN OTTHUMG00000016294.4 19709 5898 29 ENSG00000112685.12 EXOC2 chr6 485133 693111 - protein_coding KNOWN OTTHUMG00000137437.3 207979 4983 37 ENSG00000230433.1 RP1-20B11.2 chr6 524171 525581 + antisense NOVEL OTTHUMG00000014117.2 1411 851 2 ENSG00000188996.4 HUS1B chr6 655939 656963 - protein_coding KNOWN OTTHUMG00000090059.2 1025 1025 1 ENSG00000219712.1 RP11-532F6.2 chr6 669081 670307 - processed_pseudogene KNOWN OTTHUMG00000014116.1 1227 1227 1 ENSG00000203605.3 RP11-335E6.2 chr1 63139250 63163153 + lincRNA NOVEL OTTHUMG00000009144.1 23904 823 3 ENSG00000272463.1 RP11-532F6.3 chr6 708592 711405 - lincRNA NOVEL OTTHUMG00000185335.1 2814 2814 1 ENSG00000271727.1 RP11-532F6.4 chr6 711533 750729 + lincRNA NOVEL OTTHUMG00000185336.1 39197 423 4 ENSG00000271911.1 RP11-532F6.5 chr6 761675 780648 + lincRNA NOVEL OTTHUMG00000185337.1 18974 2055 3 ENSG00000272485.1 RP11-284J1.1 chr6 774747 780214 - lincRNA NOVEL OTTHUMG00000185338.1 5468 2436 2 ENSG00000276687.1 RP5-1077H22.2 chr6 905445 909006 - lincRNA NOVEL OTTHUMG00000175868.2 3562 1965 2 ENSG00000278343.1 RP5-1077H22.1 chr6 958324 962272 - lincRNA NOVEL OTTHUMG00000014118.2 3949 404 2 ENSG00000270937.1 RP5-856G1.1 chr6 1026494 1027225 - lincRNA NOVEL OTTHUMG00000185141.1 732 732 1 ENSG00000176515.1 RP5-856G1.2 chr6 1079929 1104946 + lincRNA NOVEL OTTHUMG00000187086.1 25018 3435 3 ENSG00000164379.5 FOXQ1 chr6 1312473 1314187 + protein_coding KNOWN OTTHUMG00000016160.1 1715 1715 1 ENSG00000281809.1 LINC01394 chr6 1321698 1324022 - lincRNA KNOWN OTTHUMG00000189510.1 2325 413 2 ENSG00000271593.1 RP11-335E6.4 chr1 63159083 63162636 - lincRNA NOVEL OTTHUMG00000184248.1 3554 690 6 ENSG00000261730.1 RP4-668J24.2 chr6 1383790 1385066 - antisense NOVEL OTTHUMG00000175869.1 1277 1277 1 ENSG00000137273.3 FOXF2 chr6 1389834 1395597 + protein_coding KNOWN OTTHUMG00000016243.1 5764 2187 2 ENSG00000275859.1 MIR6720 chr6 1390314 1390411 - miRNA KNOWN NA 98 98 1 ENSG00000243439.3 RN7SL352P chr6 1507322 1507598 + misc_RNA KNOWN NA 277 277 1 ENSG00000218027.2 RP11-157J24.1 chr6 1513698 1515289 - processed_pseudogene KNOWN OTTHUMG00000014119.2 1592 1592 1 ENSG00000272279.1 RP11-157J24.2 chr6 1528364 1528911 - lincRNA NOVEL OTTHUMG00000185644.1 548 548 1 ENSG00000280916.1 FOXCUT chr6 1605531 1606079 + lincRNA KNOWN OTTHUMG00000189532.1 549 333 2 ENSG00000054598.6 FOXC1 chr6 1609972 1613897 + protein_coding KNOWN OTTHUMG00000016182.1 3926 3926 1 ENSG00000112699.9 GMDS chr6 1623806 2245692 - protein_coding KNOWN OTTHUMG00000016143.5 621887 4304 51 ENSG00000250903.7 GMDS-AS1 chr6 2245748 2482022 + lincRNA NOVEL OTTHUMG00000014120.4 236275 13177 68 ENSG00000252259.1 RNA5SP49 chr1 63186336 63186450 - rRNA KNOWN NA 115 115 1 ENSG00000236086.4 HMGN2P28 chr6 2341450 2341711 + processed_pseudogene KNOWN OTTHUMG00000185340.1 262 262 1 ENSG00000266252.1 AL031768.1 chr6 2409536 2409635 - miRNA NOVEL NA 100 100 1 ENSG00000272465.1 RP1-136B1.1 chr6 2437549 2438249 + lincRNA NOVEL OTTHUMG00000185650.1 701 701 1 ENSG00000280423.1 RP11-299J5.1 chr6 2561947 2564143 + TEC KNOWN OTTHUMG00000175882.1 2197 2197 1 ENSG00000164385.7 C6orf195 chr6 2621913 2635064 - protein_coding KNOWN OTTHUMG00000014122.1 13152 2895 6 ENSG00000228718.1 RP11-145H9.3 chr6 2636936 2640001 + lincRNA NOVEL OTTHUMG00000014123.1 3066 834 2 ENSG00000145949.9 MYLK4 chr6 2663629 2750966 - protein_coding KNOWN OTTHUMG00000014121.3 87338 5806 13 ENSG00000124535.14 WRNIP1 chr6 2765414 2786952 + protein_coding KNOWN OTTHUMG00000014126.3 21539 3877 34 ENSG00000021355.11 SERPINB1 chr6 2832332 2842006 - protein_coding KNOWN OTTHUMG00000014124.1 9675 3094 25 ENSG00000266750.1 MIR4645 chr6 2854031 2854107 - miRNA KNOWN NA 77 77 1 ENSG00000224209.5 LINC00466 chr1 63189989 63317231 - lincRNA KNOWN OTTHUMG00000009143.2 127243 2240 14 ENSG00000230438.6 SERPINB9P1 chr6 2854657 2881407 - lincRNA NOVEL OTTHUMG00000014127.4 26751 1460 6 ENSG00000170542.5 SERPINB9 chr6 2887266 2903280 - protein_coding KNOWN OTTHUMG00000014131.1 16015 4118 7 ENSG00000232999.1 RP1-90J20.10 chr6 2910613 2912113 - unitary_pseudogene KNOWN OTTHUMG00000155040.1 1501 193 2 ENSG00000228365.1 RP1-90J20.2 chr6 2916894 2917733 + lincRNA NOVEL OTTHUMG00000014132.1 840 484 2 ENSG00000124570.16 SERPINB6 chr6 2948159 2972165 - protein_coding KNOWN OTTHUMG00000016170.1 24007 4729 56 ENSG00000244041.6 LINC01011 chr6 2987967 2991173 + lincRNA NOVEL OTTHUMG00000014128.5 3207 2811 9 ENSG00000124588.18 NQO2 chr6 2987987 3028869 + protein_coding KNOWN OTTHUMG00000014130.13 40883 11558 59 ENSG00000224846.2 RP1-90J20.8 chr6 2989722 2999134 - antisense NOVEL OTTHUMG00000014129.2 9413 539 4 ENSG00000271361.1 HTATSF1P2 chr6 3023142 3023772 - processed_pseudogene KNOWN OTTHUMG00000184550.1 631 631 1 ENSG00000274855.1 RP1-90J20.14 chr6 3033183 3033288 + processed_pseudogene KNOWN OTTHUMG00000187593.1 106 106 1 ENSG00000228734.2 RP11-335E6.3 chr1 63249920 63251771 + lincRNA NOVEL OTTHUMG00000009145.2 1852 859 2 ENSG00000232654.1 FAM136BP chr6 3045384 3045800 + processed_pseudogene KNOWN OTTHUMG00000014137.5 417 417 1 ENSG00000217707.2 SERPINB8P1 chr6 3048835 3049211 + unprocessed_pseudogene KNOWN OTTHUMG00000014133.2 377 377 1 ENSG00000229282.1 RP1-40E16.2 chr6 3055890 3056761 + lincRNA NOVEL OTTHUMG00000014139.1 872 398 2 ENSG00000137275.12 RIPK1 chr6 3063991 3115187 + protein_coding KNOWN OTTHUMG00000014134.2 51197 4231 29 ENSG00000272277.1 RP1-40E16.12 chr6 3068045 3068894 - antisense NOVEL OTTHUMG00000185651.1 850 850 1 ENSG00000222248.1 RNA5SP201 chr6 3088686 3088809 - rRNA KNOWN NA 124 124 1 ENSG00000137274.11 BPHL chr6 3118374 3153578 + protein_coding KNOWN OTTHUMG00000014140.5 35205 5780 73 ENSG00000228170.1 RP1-40E16.11 chr6 3138394 3153062 - antisense NOVEL OTTHUMG00000156977.1 14669 695 2 ENSG00000137267.5 TUBB2A chr6 3153669 3157526 - protein_coding KNOWN OTTHUMG00000014135.1 3858 1727 8 ENSG00000216819.1 TUBB2BP1 chr6 3177044 3179764 - unprocessed_pseudogene KNOWN OTTHUMG00000014136.1 2721 871 3 ENSG00000233234.1 RP11-740P5.2 chr1 2811850 2812692 - lincRNA NOVEL OTTHUMG00000000564.1 843 607 2 ENSG00000223683.1 AL138935.1 chr1 63262113 63262707 + processed_pseudogene KNOWN OTTHUMG00000013352.1 595 595 1 ENSG00000230269.5 RP1-40E16.9 chr6 3182744 3195756 - lincRNA NOVEL OTTHUMG00000014141.2 13013 1505 6 ENSG00000137285.9 TUBB2B chr6 3224261 3231730 - protein_coding KNOWN OTTHUMG00000014143.2 7470 2194 8 ENSG00000180822.10 PSMG4 chr6 3231403 3303373 + protein_coding KNOWN OTTHUMG00000014142.4 71971 10418 28 ENSG00000137266.13 SLC22A23 chr6 3268962 3457022 - protein_coding KNOWN OTTHUMG00000014144.3 188061 8898 91 ENSG00000272320.1 RP11-506K6.4 chr6 3311662 3313650 + antisense NOVEL OTTHUMG00000185652.1 1989 1989 1 ENSG00000228793.1 RP1-223B1.1 chr6 3594247 3624747 - lincRNA NOVEL OTTHUMG00000014145.1 30501 789 3 ENSG00000270477.1 RP1-72E17.2 chr6 3693923 3694075 - processed_pseudogene KNOWN OTTHUMG00000184551.1 153 153 1 ENSG00000168994.12 PXDC1 chr6 3722614 3752026 - protein_coding KNOWN OTTHUMG00000014146.2 29413 2474 18 ENSG00000270504.1 RP11-420L9.5 chr6 3751111 3753871 + antisense NOVEL OTTHUMG00000185108.1 2761 2761 1 ENSG00000219992.2 RP11-420L9.2 chr6 3754099 3754840 + processed_pseudogene KNOWN OTTHUMG00000014148.2 742 436 2 ENSG00000230798.4 FOXD3-AS1 chr1 63320884 63324441 - antisense NOVEL OTTHUMG00000009138.1 3558 1208 15 ENSG00000238158.5 RP11-420L9.4 chr6 3831933 3855737 + sense_overlapping NOVEL OTTHUMG00000014149.2 23805 629 4 ENSG00000145945.5 FAM50B chr6 3849386 3851317 + protein_coding KNOWN OTTHUMG00000014147.1 1932 1932 3 ENSG00000233068.2 RP1-140K8.1 chr6 3893126 3894292 + lincRNA NOVEL OTTHUMG00000014150.2 1167 642 4 ENSG00000260604.2 RP1-140K8.5 chr6 3904920 3911979 - lincRNA NOVEL OTTHUMG00000175886.3 7060 7060 1 ENSG00000218472.2 RP1-140K8.2 chr6 3913922 3914292 - processed_pseudogene KNOWN OTTHUMG00000014151.2 371 371 1 ENSG00000217135.2 RP1-140K8.3 chr6 3921847 3922146 + processed_pseudogene KNOWN OTTHUMG00000014152.2 300 300 1 ENSG00000217566.2 TDGF1P4 chr6 3941282 3941801 + processed_pseudogene KNOWN OTTHUMG00000014153.2 520 520 1 ENSG00000216657.1 GLRX3P2 chr6 3978062 3979099 + processed_pseudogene KNOWN OTTHUMG00000014155.1 1038 1038 1 ENSG00000279926.1 RP3-406P24.5 chr6 3982673 3984130 + TEC KNOWN OTTHUMG00000187087.1 1458 1458 1 ENSG00000272248.1 RP3-406P24.4 chr6 4018713 4019202 + lincRNA NOVEL OTTHUMG00000185653.1 490 490 1 ENSG00000187140.5 FOXD3 chr1 63323041 63325126 + protein_coding KNOWN OTTHUMG00000009141.1 2086 2086 1 ENSG00000230648.1 RP3-406P24.3 chr6 4018843 4021215 - antisense NOVEL OTTHUMG00000014156.1 2373 209 2 ENSG00000112739.15 PRPF4B chr6 4021267 4064983 + protein_coding KNOWN OTTHUMG00000014157.6 43717 7859 87 ENSG00000145975.12 FAM217A chr6 4049434 4087344 - protein_coding KNOWN OTTHUMG00000014159.5 37911 3138 31 ENSG00000185689.14 C6orf201 chr6 4079209 4130951 + protein_coding KNOWN OTTHUMG00000014160.5 51743 3319 32 ENSG00000198721.11 ECI2 chr6 4115689 4135597 - protein_coding KNOWN OTTHUMG00000014158.7 19909 4579 94 ENSG00000254821.1 RP3-400B16.4 chr6 4135423 4146053 + antisense NOVEL OTTHUMG00000166289.1 10631 640 2 ENSG00000234817.2 RP3-400B16.1 chr6 4136072 4157385 + lincRNA NOVEL OTTHUMG00000014161.2 21314 2277 4 ENSG00000237716.1 RP3-400B16.3 chr6 4186624 4188109 - lincRNA NOVEL OTTHUMG00000014163.1 1486 266 2 ENSG00000216307.2 RP3-400B16.2 chr6 4189116 4189806 + processed_pseudogene KNOWN OTTHUMG00000014162.2 691 691 1 ENSG00000231811.2 RP3-527G5.1 chr6 4345743 4347037 - lincRNA NOVEL OTTHUMG00000014165.2 1295 329 3 ENSG00000275836.1 MIR6068 chr1 63326925 63326984 - miRNA KNOWN NA 60 60 1 ENSG00000201185.1 RNA5SP202 chr6 4427963 4428081 + rRNA KNOWN NA 119 119 1 ENSG00000260239.1 RP11-274H24.1 chr6 4491807 4495769 + lincRNA NOVEL OTTHUMG00000175890.2 3963 2272 2 ENSG00000270695.1 RP1-21P18.1 chr6 4529722 4530008 + processed_pseudogene KNOWN OTTHUMG00000184547.1 287 287 1 ENSG00000260673.1 RP4-529N6.2 chr6 4599287 4602420 - lincRNA NOVEL OTTHUMG00000175892.1 3134 573 2 ENSG00000205444.2 RP4-529N6.1 chr6 4610656 4611304 + lincRNA NOVEL OTTHUMG00000014166.1 649 484 2 ENSG00000217385.1 PSMC1P11 chr6 4702463 4703779 + processed_pseudogene KNOWN OTTHUMG00000014167.1 1317 1317 1 ENSG00000153046.16 CDYL chr6 4706159 4955551 + protein_coding KNOWN OTTHUMG00000014170.4 249393 4531 50 ENSG00000236336.1 RP3-430A16.1 chr6 4774526 4775408 - antisense NOVEL OTTHUMG00000156967.1 883 369 2 ENSG00000217030.1 RP11-428J1.2 chr6 4979072 4979494 + processed_pseudogene KNOWN OTTHUMG00000014169.1 423 423 1 ENSG00000124787.12 RPP40 chr6 4994732 5004063 - protein_coding KNOWN OTTHUMG00000014168.3 9332 1962 43 ENSG00000252784.1 Y_RNA chr1 63338263 63338372 + misc_RNA NOVEL NA 110 110 1 ENSG00000272142.1 RP11-428J1.5 chr6 5029972 5043449 + lincRNA NOVEL OTTHUMG00000185668.1 13478 1489 6 ENSG00000271978.1 RP11-428J1.4 chr6 5031756 5054423 - lincRNA NOVEL OTTHUMG00000185669.1 22668 3273 2 ENSG00000220685.3 RP11-530A18.1 chr6 5065795 5066982 - processed_pseudogene KNOWN OTTHUMG00000014171.1 1188 1188 1 ENSG00000219607.3 PPP1R3G chr6 5084581 5089487 + protein_coding KNOWN OTTHUMG00000014172.4 4907 4907 1 ENSG00000214113.9 LYRM4 chr6 5102593 5260939 - protein_coding KNOWN OTTHUMG00000014173.6 158347 9443 26 ENSG00000265083.1 MIR3691 chr6 5148233 5148322 - miRNA KNOWN NA 90 90 1 ENSG00000280624.1 AL162381.1 chr6 5224728 5224797 - miRNA NOVEL NA 70 70 1 ENSG00000145982.10 FARS2 chr6 5261044 5771580 + protein_coding KNOWN OTTHUMG00000014178.2 510537 2351 20 ENSG00000220446.2 RP3-520B18.1 chr6 5291030 5291388 - processed_pseudogene KNOWN OTTHUMG00000014175.2 359 359 1 ENSG00000269985.1 RP1-232P20.1 chr6 5451683 5458075 - antisense NOVEL OTTHUMG00000184022.1 6393 1333 5 ENSG00000236674.1 RP4-792G4.3 chr1 63359823 63361179 - processed_pseudogene KNOWN OTTHUMG00000013350.1 1357 1357 1 ENSG00000218574.1 HNRNPA1P37 chr6 5609227 5610195 - processed_pseudogene KNOWN OTTHUMG00000014177.1 969 969 1 ENSG00000270174.1 RP1-256G22.2 chr6 5664985 5695272 - antisense NOVEL OTTHUMG00000184023.1 30288 806 4 ENSG00000217239.3 RP1-182O16.1 chr6 5788346 5788699 - processed_pseudogene KNOWN OTTHUMG00000014180.1 354 354 1 ENSG00000216360.1 RP1-182O16.2 chr6 5817421 5818366 - processed_pseudogene KNOWN OTTHUMG00000014181.1 946 946 1 ENSG00000233064.2 RP3-380B8.4 chr6 5851506 5870220 + lincRNA NOVEL OTTHUMG00000014182.2 18715 411 3 ENSG00000239472.3 RN7SL221P chr6 5918564 5918844 - misc_RNA KNOWN NA 281 281 1 ENSG00000215057.4 PKMP5 chr6 5972412 5974012 + processed_pseudogene KNOWN OTTHUMG00000014183.2 1601 1601 1 ENSG00000124785.7 NRN1 chr6 5997999 6007605 - protein_coding KNOWN OTTHUMG00000014184.1 9607 2328 14 ENSG00000124491.14 F13A1 chr6 6144085 6321013 - protein_coding KNOWN OTTHUMG00000014186.5 176929 4690 34 ENSG00000263572.2 MIR7853 chr6 6169304 6169435 - miRNA KNOWN NA 132 132 1 ENSG00000088035.14 ALG6 chr1 63367590 63438562 + protein_coding KNOWN OTTHUMG00000009140.6 70973 4950 57 ENSG00000216863.8 LY86-AS1 chr6 6346465 6622771 - antisense NOVEL OTTHUMG00000014192.3 276307 5603 25 ENSG00000241216.1 SNAPC5P1 chr6 6347081 6347381 - transcribed_processed_pseudogene KNOWN OTTHUMG00000014187.1 301 301 1 ENSG00000218868.1 CNN3P1 chr6 6534697 6535631 + processed_pseudogene KNOWN OTTHUMG00000014189.1 935 935 1 ENSG00000112799.7 LY86 chr6 6588108 6654983 + protein_coding KNOWN OTTHUMG00000014190.2 66876 1254 11 ENSG00000261211.1 RP1-80N2.3 chr6 6680309 6683633 - lincRNA NOVEL OTTHUMG00000175893.1 3325 3325 1 ENSG00000279368.1 RP1-80N2.4 chr6 6685148 6686984 + TEC KNOWN OTTHUMG00000175895.1 1837 1837 1 ENSG00000226281.2 RP1-80N2.2 chr6 6692744 6711002 - lincRNA NOVEL OTTHUMG00000014191.2 18259 568 2 ENSG00000224532.2 RP3-470L22.1 chr6 6758276 6759291 - lincRNA NOVEL OTTHUMG00000014193.2 1016 506 2 ENSG00000219986.2 BTF3P7 chr6 6794915 6795402 - processed_pseudogene KNOWN OTTHUMG00000014194.2 488 488 1 ENSG00000223342.2 RP3-429O6.1 chr6 6901022 6918715 - lincRNA NOVEL OTTHUMG00000014195.2 17694 933 2 ENSG00000142856.15 ITGB3BP chr1 63440770 63593721 - protein_coding KNOWN OTTHUMG00000013364.12 152952 5459 82 ENSG00000240936.3 RN7SL554P chr6 6938606 6938897 - misc_RNA KNOWN NA 292 292 1 ENSG00000203498.2 RP11-556O15.1 chr6 6993191 6995554 + lincRNA NOVEL OTTHUMG00000014196.1 2364 517 3 ENSG00000124782.18 RREB1 chr6 7107597 7251980 + protein_coding KNOWN OTTHUMG00000014201.3 144384 17254 89 ENSG00000225092.2 RP11-405O10.2 chr6 7183083 7185287 + sense_intronic NOVEL OTTHUMG00000014197.2 2205 1676 2 ENSG00000201483.1 Y_RNA chr6 7187582 7187686 - misc_RNA NOVEL NA 105 105 1 ENSG00000124783.11 SSR1 chr6 7268306 7347446 - protein_coding KNOWN OTTHUMG00000014202.3 79141 11349 66 ENSG00000238221.1 RP11-69L16.4 chr6 7276031 7298872 + antisense NOVEL OTTHUMG00000014204.1 22842 500 3 ENSG00000164304.14 CAGE1 chr6 7326656 7389743 - protein_coding KNOWN OTTHUMG00000014200.3 63088 3512 101 ENSG00000219375.1 RP11-69L16.3 chr6 7331286 7331676 - processed_pseudogene KNOWN OTTHUMG00000014203.1 391 391 1 ENSG00000220472.1 RP11-69L16.5 chr6 7338839 7339568 - processed_pseudogene KNOWN OTTHUMG00000014205.1 730 730 1 ENSG00000203965.11 EFCAB7 chr1 63523372 63572693 + protein_coding KNOWN OTTHUMG00000008983.2 49322 5704 35 ENSG00000230570.1 RP11-69L16.6 chr6 7340854 7342056 - processed_pseudogene KNOWN OTTHUMG00000014206.1 1203 1203 1 ENSG00000124784.7 RIOK1 chr6 7389496 7418037 + protein_coding KNOWN OTTHUMG00000014207.2 28542 3237 43 ENSG00000233503.1 HNRNPLP1 chr6 7481094 7482594 - processed_pseudogene KNOWN OTTHUMG00000014208.1 1501 1501 1 ENSG00000219993.1 RP11-288G3.3 chr6 7506203 7506549 + processed_pseudogene KNOWN OTTHUMG00000014209.1 347 347 1 ENSG00000234115.2 RP11-288G3.4 chr6 7516600 7517840 - processed_pseudogene KNOWN OTTHUMG00000014210.2 1241 1241 1 ENSG00000261189.1 RP3-512B11.3 chr6 7540451 7541338 - antisense NOVEL OTTHUMG00000175897.1 888 888 1 ENSG00000096696.12 DSP chr6 7541575 7586717 + protein_coding KNOWN OTTHUMG00000014212.4 45143 10093 52 ENSG00000168566.11 SNRNP48 chr6 7590199 7611967 + protein_coding KNOWN OTTHUMG00000014213.3 21769 5836 14 ENSG00000236512.1 RP3-336K20__B.2 chr6 7620422 7620878 + processed_pseudogene KNOWN OTTHUMG00000014215.2 457 457 1 ENSG00000153162.8 BMP6 chr6 7726797 7881422 + protein_coding KNOWN OTTHUMG00000014217.1 154626 2780 7 ENSG00000264271.2 RN7SL488P chr1 63529613 63529898 - misc_RNA KNOWN NA 286 286 1 ENSG00000259040.4 BLOC1S5-TXNDC5 chr6 7881250 8064364 - protein_coding KNOWN OTTHUMG00000171453.1 183115 3302 23 ENSG00000239264.7 TXNDC5 chr6 7881517 7910814 - protein_coding KNOWN OTTHUMG00000014216.2 29298 4387 30 ENSG00000217746.1 RP1-303A1.1 chr6 7938430 7939322 - processed_pseudogene KNOWN OTTHUMG00000014218.1 893 893 1 ENSG00000219294.6 PIP5K1P1 chr6 7986537 7988192 + processed_pseudogene KNOWN OTTHUMG00000014219.1 1656 1656 1 ENSG00000188428.15 BLOC1S5 chr6 8013567 8064414 - protein_coding KNOWN OTTHUMG00000014220.4 50848 3315 27 ENSG00000265818.1 EEF1E1-BLOC1S5 chr6 8015726 8102530 - protein_coding KNOWN OTTHUMG00000179299.1 86805 768 7 ENSG00000124802.10 EEF1E1 chr6 8073360 8102578 - protein_coding KNOWN OTTHUMG00000014221.3 29219 2107 20 ENSG00000232234.2 RP11-203H2.1 chr6 8329655 8342455 + lincRNA NOVEL OTTHUMG00000014222.1 12801 400 2 ENSG00000234763.1 RP11-203H2.2 chr6 8341937 8343021 - lincRNA NOVEL OTTHUMG00000014223.1 1085 746 2 ENSG00000124786.9 SLC35B3 chr6 8413068 8435483 - protein_coding KNOWN OTTHUMG00000014224.1 22416 2137 11 ENSG00000231630.1 RP11-740P5.3 chr1 2814432 2814998 - lincRNA NOVEL OTTHUMG00000000565.1 567 429 2 ENSG00000251720.1 RNU7-123P chr1 63536711 63536770 - snRNA KNOWN NA 60 60 1 ENSG00000251164.1 HULC chr6 8652137 8653846 + lincRNA KNOWN OTTHUMG00000160417.1 1710 556 2 ENSG00000276019.1 HULC chr6 8653558 8653797 + misc_RNA NOVEL NA 240 240 1 ENSG00000230939.1 RP11-314C16.1 chr6 8784178 8785445 + lincRNA NOVEL OTTHUMG00000014225.1 1268 489 2 ENSG00000225775.1 RP11-354I10.1 chr6 9124221 9161777 - lincRNA NOVEL OTTHUMG00000014226.1 37557 661 3 ENSG00000181355.19 OFCC1 chr6 9596110 10211608 - protein_coding KNOWN OTTHUMG00000159104.7 615499 4807 140 ENSG00000216368.2 RP3-486D24.1 chr6 10118452 10119253 + processed_pseudogene KNOWN OTTHUMG00000014227.2 802 802 1 ENSG00000229765.2 RP11-339A7.1 chr6 10213881 10214362 - processed_pseudogene KNOWN OTTHUMG00000014228.2 482 482 1 ENSG00000221583.1 RNU6ATAC21P chr6 10222036 10222161 + snRNA KNOWN NA 126 126 1 ENSG00000275271.1 AL138885.1 chr6 10312350 10312458 + miRNA NOVEL NA 109 109 1 ENSG00000216781.2 RP1-290I10.2 chr6 10365593 10366582 - processed_pseudogene KNOWN OTTHUMG00000014229.2 990 675 2 ENSG00000116652.6 DLEU2L chr1 63547082 63550636 + sense_intronic KNOWN OTTHUMG00000008984.3 3555 3555 1 ENSG00000137203.9 TFAP2A chr6 10393186 10419659 - protein_coding KNOWN OTTHUMG00000014235.3 26474 8245 97 ENSG00000229950.1 TFAP2A-AS1 chr6 10409340 10416446 + antisense NOVEL OTTHUMG00000014233.1 7107 1692 5 ENSG00000228478.1 RP1-290I10.3 chr6 10423140 10426176 - lincRNA NOVEL OTTHUMG00000014230.1 3037 539 3 ENSG00000183674.10 LINC00518 chr6 10429255 10434874 - lincRNA NOVEL OTTHUMG00000159175.1 5620 1895 14 ENSG00000229401.1 RP1-290I10.7 chr6 10434316 10456781 + lincRNA NOVEL OTTHUMG00000014234.1 22466 860 6 ENSG00000263705.1 MIR5689 chr6 10439717 10439794 + miRNA KNOWN NA 78 78 1 ENSG00000238076.1 MRPL48P1 chr6 10459906 10460541 - processed_pseudogene KNOWN OTTHUMG00000014231.2 636 636 1 ENSG00000231056.1 RP1-290I10.5 chr6 10474500 10478502 - lincRNA NOVEL OTTHUMG00000014232.1 4003 256 2 ENSG00000111846.14 GCNT2 chr6 10492223 10629368 + protein_coding KNOWN OTTHUMG00000014244.4 137146 9052 60 ENSG00000237685.1 RP11-360O19.4 chr6 10511036 10514546 - antisense NOVEL OTTHUMG00000014238.1 3511 1475 2 ENSG00000276884.1 DLEU2_6 chr1 63548977 63549112 - misc_RNA NOVEL NA 136 136 1 ENSG00000216359.1 RP11-360O19.1 chr6 10514282 10514973 + processed_pseudogene KNOWN OTTHUMG00000014236.1 692 692 1 ENSG00000217181.1 RP11-360O19.5 chr6 10574749 10575227 - processed_pseudogene KNOWN OTTHUMG00000014239.1 479 479 1 ENSG00000205318.5 GCNT6 chr6 10633762 10634695 + processed_pseudogene KNOWN OTTHUMG00000014243.2 934 934 1 ENSG00000137434.10 C6orf52 chr6 10671418 10694797 - protein_coding KNOWN OTTHUMG00000014240.3 23380 884 28 ENSG00000201048.1 Y_RNA chr6 10674658 10674768 - misc_RNA NOVEL NA 111 111 1 ENSG00000111845.4 PAK1IP1 chr6 10694695 10709782 + protein_coding KNOWN OTTHUMG00000014245.1 15088 1800 10 ENSG00000111843.12 TMEM14C chr6 10722915 10731129 + protein_coding KNOWN OTTHUMG00000014242.1 8215 1321 25 ENSG00000272097.1 RP11-421M1.8 chr6 10743324 10747663 - lincRNA NOVEL OTTHUMG00000185674.1 4340 1471 4 ENSG00000137210.12 TMEM14B chr6 10747759 10852753 + protein_coding KNOWN OTTHUMG00000014246.3 104995 4815 95 ENSG00000272162.1 RP11-637O19.3 chr6 10747794 10930423 + protein_coding NOVEL OTTHUMG00000185388.1 182630 1589 19 ENSG00000278287.1 DLEU2_5 chr1 63549133 63549216 - misc_RNA NOVEL NA 84 84 1 ENSG00000222383.1 RNA5SP203 chr6 10752791 10752926 - rRNA KNOWN NA 136 136 1 ENSG00000111837.10 MAK chr6 10762723 10838555 - protein_coding KNOWN OTTHUMG00000014247.2 75833 4226 70 ENSG00000124827.6 GCM2 chr6 10873223 10881941 - protein_coding KNOWN OTTHUMG00000014249.1 8719 2441 5 ENSG00000235051.3 RP11-637O19.2 chr6 10881780 10884349 + antisense NOVEL OTTHUMG00000014248.3 2570 666 3 ENSG00000153157.11 SYCP2L chr6 10886831 10979320 + protein_coding KNOWN OTTHUMG00000014250.3 92490 3962 107 ENSG00000197977.3 ELOVL2 chr6 10980759 11044314 - protein_coding KNOWN OTTHUMG00000014252.1 63556 3997 8 ENSG00000274541.1 RP1-62D2.4 chr6 11015586 11015888 + processed_pseudogene KNOWN OTTHUMG00000187594.1 303 303 1 ENSG00000230314.5 ELOVL2-AS1 chr6 11043524 11078226 + antisense NOVEL OTTHUMG00000014251.2 34703 1587 14 ENSG00000224531.5 SMIM13 chr6 11094033 11138733 + protein_coding KNOWN OTTHUMG00000014253.5 44701 4688 5 ENSG00000244476.2 ERVFRD-1 chr6 11102489 11111732 - protein_coding KNOWN OTTHUMG00000159193.1 9244 3242 3 ENSG00000277565.1 DLEU2_4 chr1 63549227 63549284 - misc_RNA NOVEL NA 58 58 1 ENSG00000271245.1 RP4-761I2.5 chr6 11154929 11155150 - processed_pseudogene KNOWN OTTHUMG00000184552.1 222 222 1 ENSG00000247925.2 RP3-510L9.1 chr6 11173452 11259099 + antisense NOVEL OTTHUMG00000162157.1 85648 704 5 ENSG00000111859.15 NEDD9 chr6 11183298 11382348 - protein_coding KNOWN OTTHUMG00000014255.5 199051 10359 69 ENSG00000233656.1 RP11-716O23.1 chr6 11417350 11481239 + lincRNA NOVEL OTTHUMG00000014256.1 63890 699 3 ENSG00000242753.1 RP11-716O23.2 chr6 11487226 11515710 + lincRNA NOVEL OTTHUMG00000014257.1 28485 686 5 ENSG00000202313.1 RNU1-64P chr6 11503509 11503671 - snRNA KNOWN NA 163 163 1 ENSG00000218020.3 PRKRIRP5 chr6 11514192 11516466 + transcribed_processed_pseudogene KNOWN OTTHUMG00000014258.1 2275 2275 1 ENSG00000205269.5 TMEM170B chr6 11538278 11583524 + protein_coding KNOWN OTTHUMG00000014259.1 45247 8362 3 ENSG00000271897.1 RP11-679B17.2 chr6 11607552 11607981 + lincRNA NOVEL OTTHUMG00000185675.1 430 430 1 ENSG00000277473.1 Metazoa_SRP chr6 11644067 11644343 + misc_RNA NOVEL NA 277 277 1 ENSG00000275823.1 DLEU2_3 chr1 63549294 63549366 - misc_RNA NOVEL NA 73 73 1 ENSG00000207419.1 SNORA67 chr6 11709819 11709960 + snoRNA NOVEL NA 142 142 1 ENSG00000111863.11 ADTRP chr6 11712054 11807046 - protein_coding KNOWN OTTHUMG00000014260.3 94993 4150 50 ENSG00000234427.1 RP3-413H6.2 chr6 11810602 11811248 + lincRNA NOVEL OTTHUMG00000014261.1 647 554 2 ENSG00000215124.2 RP3-420J14.1 chr6 11861626 11862970 - processed_pseudogene KNOWN OTTHUMG00000014262.1 1345 1345 1 ENSG00000225102.1 RP11-456H18.1 chr6 11990343 11992012 - antisense NOVEL OTTHUMG00000014263.1 1670 276 2 ENSG00000229896.2 RP11-456H18.2 chr6 12007670 12008856 + lincRNA NOVEL OTTHUMG00000014264.2 1187 855 5 ENSG00000095951.15 HIVEP1 chr6 12008762 12164999 + protein_coding KNOWN OTTHUMG00000014265.3 156238 10979 51 ENSG00000078401.6 EDN1 chr6 12290363 12297194 + protein_coding KNOWN OTTHUMG00000014266.1 6832 2033 5 ENSG00000218893.1 SUMO2P12 chr6 12319453 12319592 + processed_pseudogene KNOWN OTTHUMG00000014267.1 140 140 1 ENSG00000223321.1 RN7SKP293 chr6 12406486 12406781 - misc_RNA KNOWN NA 296 296 1 ENSG00000277689.1 DLEU2_2 chr1 63549374 63549463 - misc_RNA NOVEL NA 90 90 1 ENSG00000212802.4 RPL15P3 chr6 12514110 12514724 + processed_pseudogene KNOWN OTTHUMG00000014268.2 615 615 1 ENSG00000234015.1 RP11-125M16.1 chr6 12582915 12585404 - lincRNA NOVEL OTTHUMG00000014269.1 2490 894 2 ENSG00000112137.15 PHACTR1 chr6 12716805 13290484 + protein_coding KNOWN OTTHUMG00000014270.2 573680 11200 69 ENSG00000223291.1 AL354680.1 chr6 12753675 12753771 + miRNA NOVEL NA 97 97 1 ENSG00000206702.1 RNU1-11P chr6 13214056 13214219 + snRNA KNOWN NA 164 164 1 ENSG00000215022.6 RP1-257A7.4 chr6 13264861 13295586 - antisense NOVEL OTTHUMG00000014271.3 30726 3115 15 ENSG00000145979.16 TBC1D7 chr6 13266542 13328583 - protein_coding KNOWN OTTHUMG00000014272.3 62042 8300 119 ENSG00000272379.1 RP1-257A7.5 chr6 13290018 13290490 - lincRNA NOVEL OTTHUMG00000185350.2 473 473 1 ENSG00000145990.9 GFOD1 chr6 13357830 13487662 - protein_coding KNOWN OTTHUMG00000014276.2 129833 10686 12 ENSG00000237786.1 GFOD1-AS1 chr6 13486294 13486852 + antisense NOVEL OTTHUMG00000014274.1 559 332 2 ENSG00000274199.1 DLEU2_1 chr1 63549489 63549608 - misc_RNA NOVEL NA 120 120 1 ENSG00000218265.1 RPS4XP7 chr6 13521266 13522045 + processed_pseudogene KNOWN OTTHUMG00000014275.1 780 780 1 ENSG00000202351.1 RN7SKP204 chr6 13547704 13548013 + misc_RNA KNOWN NA 310 310 1 ENSG00000124523.13 SIRT5 chr6 13574529 13615158 + protein_coding KNOWN OTTHUMG00000014278.2 40630 6023 52 ENSG00000261071.1 RP1-223E5.4 chr6 13614111 13615155 - antisense NOVEL OTTHUMG00000175899.1 1045 1045 1 ENSG00000225921.5 NOL7 chr6 13615327 13632739 + protein_coding KNOWN OTTHUMG00000014277.1 17413 1865 21 ENSG00000010017.12 RANBP9 chr6 13621498 13711564 - protein_coding KNOWN OTTHUMG00000015642.1 90067 3347 17 ENSG00000280458.1 U7 chr6 13680080 13680141 + snRNA NOVEL NA 62 62 1 ENSG00000050393.10 MCUR1 chr6 13786557 13814568 - protein_coding KNOWN OTTHUMG00000014279.3 28012 6057 26 ENSG00000272209.1 RP3-500L14.2 chr6 13825432 13826574 + lincRNA NOVEL OTTHUMG00000185343.1 1143 1143 1 ENSG00000180537.11 RNF182 chr6 13924446 13980302 + protein_coding KNOWN OTTHUMG00000014280.2 55857 4090 23 ENSG00000079739.14 PGM1 chr1 63593276 63660245 + protein_coding KNOWN OTTHUMG00000008968.2 66970 4090 37 ENSG00000220868.2 MRPL35P1 chr6 13949095 13949666 + processed_pseudogene KNOWN OTTHUMG00000014281.2 572 572 1 ENSG00000233981.1 RP3-380E11.2 chr6 14004920 14006901 + lincRNA NOVEL OTTHUMG00000014282.1 1982 386 2 ENSG00000112149.8 CD83 chr6 14117256 14136918 + protein_coding KNOWN OTTHUMG00000014283.1 19663 2515 10 ENSG00000238987.1 RNU7-133P chr6 14156462 14156523 + snRNA KNOWN NA 62 62 1 ENSG00000230631.1 RP11-359N11.1 chr6 14229775 14231570 - lincRNA NOVEL OTTHUMG00000014284.1 1796 470 2 ENSG00000226673.1 LINC01108 chr6 14280127 14285145 - lincRNA NOVEL OTTHUMG00000014285.1 5019 3152 2 ENSG00000237346.1 RP3-448I9.2 chr6 14391231 14393288 - lincRNA NOVEL OTTHUMG00000014287.1 2058 489 4 ENSG00000234540.1 RP3-448I9.1 chr6 14394326 14404289 + lincRNA NOVEL OTTHUMG00000014286.1 9964 405 3 ENSG00000229646.2 RP11-330A16.1 chr6 14597514 14599690 - lincRNA NOVEL OTTHUMG00000014288.2 2177 146 2 ENSG00000206960.1 RNU6-793P chr6 14646535 14646638 + snRNA KNOWN NA 104 104 1 ENSG00000244256.3 RN7SL130P chr1 63655743 63656047 + misc_RNA KNOWN NA 305 305 1 ENSG00000234261.2 RP11-146I2.1 chr6 14661829 15090003 - lincRNA NOVEL OTTHUMG00000014290.2 428175 1735 8 ENSG00000216754.2 RP1-190J20.2 chr6 15102946 15104130 - processed_pseudogene KNOWN OTTHUMG00000014291.2 1185 869 2 ENSG00000242989.3 RN7SL332P chr6 15112968 15113221 + misc_RNA KNOWN NA 254 254 1 ENSG00000264687.1 AL050335.1 chr6 15149699 15149799 - miRNA NOVEL NA 101 101 1 ENSG00000271888.1 RP11-560J1.2 chr6 15243923 15245000 - lincRNA NOVEL OTTHUMG00000185676.1 1078 1078 1 ENSG00000008083.12 JARID2 chr6 15246296 15522040 + protein_coding KNOWN OTTHUMG00000014293.1 275745 6015 42 ENSG00000235488.1 JARID2-AS1 chr6 15247815 15248634 - antisense NOVEL OTTHUMG00000014292.1 820 455 2 ENSG00000201367.1 RNU6-522P chr6 15314920 15315026 + snRNA KNOWN NA 107 107 1 ENSG00000201519.1 RNU6-645P chr6 15324367 15324472 - snRNA KNOWN NA 106 106 1 ENSG00000277411.1 5S_rRNA chr6 15522195 15522300 - rRNA NOVEL NA 106 106 1 ENSG00000169717.6 ACTRT2 chr1 3021483 3022903 + protein_coding KNOWN OTTHUMG00000000562.1 1421 1421 1 ENSG00000185483.10 ROR1 chr1 63774022 64181498 + protein_coding KNOWN OTTHUMG00000009022.1 407477 6715 30 ENSG00000047579.18 DTNBP1 chr6 15522801 15663058 - protein_coding KNOWN OTTHUMG00000014295.5 140258 3052 93 ENSG00000214027.3 ARPC3P5 chr6 15934782 15935315 + processed_pseudogene KNOWN OTTHUMG00000014296.1 534 534 1 ENSG00000232947.1 RP11-401E14.2 chr6 15994944 15999797 + lincRNA NOVEL OTTHUMG00000014297.1 4854 845 2 ENSG00000274212.1 RP11-401E14.3 chr6 16041381 16041614 - processed_pseudogene KNOWN OTTHUMG00000187595.1 234 234 1 ENSG00000217585.1 RP1-13D10.5 chr6 16107622 16108593 + processed_pseudogene KNOWN OTTHUMG00000014301.1 972 972 1 ENSG00000007944.13 MYLIP chr6 16129125 16148248 + protein_coding KNOWN OTTHUMG00000016405.2 19124 3033 13 ENSG00000263712.1 MIR4639 chr6 16141556 16141624 + miRNA KNOWN NA 69 69 1 ENSG00000218073.1 RP1-13D10.2 chr6 16160926 16161411 + processed_pseudogene KNOWN OTTHUMG00000014299.1 486 486 1 ENSG00000217078.1 RP1-13D10.3 chr6 16163377 16163762 - processed_pseudogene KNOWN OTTHUMG00000014300.1 386 386 1 ENSG00000216364.1 MRPL42P2 chr6 16171606 16172031 + processed_pseudogene KNOWN OTTHUMG00000014298.1 426 426 1 ENSG00000177452.7 RP4-597J3.1 chr1 63788721 63789304 - processed_pseudogene KNOWN OTTHUMG00000009020.1 584 584 1 ENSG00000251831.1 RNU6-1114P chr6 16205014 16205120 + snRNA KNOWN NA 107 107 1 ENSG00000207193.1 Y_RNA chr6 16232231 16232330 - misc_RNA NOVEL NA 100 100 1 ENSG00000137198.8 GMPR chr6 16238580 16295549 + protein_coding KNOWN OTTHUMG00000014302.3 56970 2232 18 ENSG00000124788.16 ATXN1 chr6 16299112 16761491 - protein_coding KNOWN OTTHUMG00000014303.3 462380 16487 46 ENSG00000281447.1 AL009031.1 chr6 16301693 16301824 - miRNA NOVEL NA 132 132 1 ENSG00000265642.1 AL034375.1 chr6 16428444 16428523 - miRNA NOVEL NA 80 80 1 ENSG00000229931.1 RP1-151F17.1 chr6 16761138 16762652 + antisense NOVEL OTTHUMG00000153136.1 1515 698 5 ENSG00000272341.1 RP1-151F17.2 chr6 16764346 16766883 + lincRNA NOVEL OTTHUMG00000185677.1 2538 2538 1 ENSG00000221492.2 AL591610.1 chr6 16897425 16897489 + miRNA NOVEL NA 65 65 1 ENSG00000277100.1 AL133405.1 chr6 17054585 17054684 + miRNA NOVEL NA 100 100 1 ENSG00000228056.3 CFL1P3 chr1 63843196 63843685 - processed_pseudogene KNOWN OTTHUMG00000009021.1 490 490 1 ENSG00000230873.7 STMND1 chr6 17102258 17131372 + protein_coding KNOWN OTTHUMG00000014304.3 29115 2882 12 ENSG00000112183.13 RBM24 chr6 17281346 17293875 + protein_coding KNOWN OTTHUMG00000014306.4 12530 3444 29 ENSG00000219314.1 RP1-273P12.1 chr6 17381367 17382120 + processed_pseudogene KNOWN OTTHUMG00000014307.1 754 754 1 ENSG00000112186.10 CAP2 chr6 17393216 17557792 + protein_coding KNOWN OTTHUMG00000014311.2 164577 3637 97 ENSG00000184612.8 RPL7P26 chr6 17530899 17531652 - processed_pseudogene KNOWN OTTHUMG00000014308.2 754 754 1 ENSG00000218359.1 SUMO2P13 chr6 17582034 17582305 + processed_pseudogene KNOWN OTTHUMG00000014310.1 272 272 1 ENSG00000137414.5 FAM8A1 chr6 17600355 17611719 + protein_coding KNOWN OTTHUMG00000014309.1 11365 4677 5 ENSG00000124789.10 NUP153 chr6 17615035 17706834 - protein_coding KNOWN OTTHUMG00000014312.1 91800 6030 66 ENSG00000206881.1 RNU6-190P chr6 17619533 17619634 + snRNA KNOWN NA 102 102 1 ENSG00000272269.1 RP11-500C11.3 chr6 17706257 17707344 + antisense NOVEL OTTHUMG00000185678.1 1088 1088 1 ENSG00000207190.1 RNU6-809P chr1 64028894 64029000 - snRNA KNOWN NA 107 107 1 ENSG00000201415.1 RNA5SP204 chr6 17721786 17721903 - rRNA KNOWN NA 118 118 1 ENSG00000201442.2 Y_RNA chr6 17737458 17737556 - misc_RNA NOVEL NA 99 99 1 ENSG00000137177.17 KIF13A chr6 17759183 17987623 - protein_coding KNOWN OTTHUMG00000014313.7 228441 11006 214 ENSG00000220920.1 RP3-525L6.2 chr6 17953572 17953930 + unprocessed_pseudogene KNOWN OTTHUMG00000014314.1 359 359 1 ENSG00000187566.4 NHLRC1 chr6 18121419 18122606 - protein_coding KNOWN OTTHUMG00000014315.1 1188 1188 1 ENSG00000137364.4 TPMT chr6 18128311 18155074 - protein_coding KNOWN OTTHUMG00000014317.1 26764 3181 9 ENSG00000165097.12 KDM1B chr6 18155329 18223853 + protein_coding KNOWN OTTHUMG00000014316.4 68525 4595 37 ENSG00000124795.13 DEK chr6 18223868 18264823 - protein_coding KNOWN OTTHUMG00000014319.4 40956 4361 56 ENSG00000199715.1 Y_RNA chr6 18273165 18273266 - misc_RNA NOVEL NA 102 102 1 ENSG00000278102.1 RP11-14J16.1 chr6 18304854 18305045 - processed_pseudogene KNOWN OTTHUMG00000187596.1 192 192 1 ENSG00000200508.1 Y_RNA chr1 64066640 64066741 - misc_RNA NOVEL NA 102 102 1 ENSG00000200681.1 RNU6-263P chr6 18306973 18307079 - snRNA KNOWN NA 107 107 1 ENSG00000217414.2 RP11-528A10.2 chr6 18363417 18365423 - processed_pseudogene KNOWN OTTHUMG00000014321.2 2007 2007 1 ENSG00000218976.2 RP11-528A10.1 chr6 18366736 18368644 - unprocessed_pseudogene KNOWN OTTHUMG00000014320.2 1909 1314 3 ENSG00000137393.9 RNF144B chr6 18387350 18468874 + protein_coding KNOWN OTTHUMG00000014322.2 81525 5175 11 ENSG00000207775.1 MIR548A1 chr6 18571784 18571880 + miRNA KNOWN NA 97 97 1 ENSG00000217379.2 RP11-254A17.1 chr6 19143695 19144160 + processed_pseudogene KNOWN OTTHUMG00000014324.2 466 466 1 ENSG00000231662.1 RP11-686D16.1 chr6 19290319 19321021 - lincRNA NOVEL OTTHUMG00000014325.1 30703 381 2 ENSG00000218643.2 RPL5P20 chr6 19348181 19349076 + processed_pseudogene KNOWN OTTHUMG00000014326.2 896 896 1 ENSG00000201523.1 RNA5SP205 chr6 19438283 19438418 + rRNA KNOWN NA 136 136 1 ENSG00000226786.2 RP1-167F1.2 chr6 19534944 19839080 - antisense NOVEL OTTHUMG00000014329.2 304137 794 5 ENSG00000223949.5 ROR1-AS1 chr1 64094442 64171297 - antisense NOVEL OTTHUMG00000009024.2 76856 3544 11 ENSG00000214012.4 KRT18P38 chr6 19612755 19614036 + processed_pseudogene KNOWN OTTHUMG00000014327.2 1282 1282 1 ENSG00000217314.2 UQCRFS1P3 chr6 19638040 19638808 - processed_pseudogene KNOWN OTTHUMG00000014328.2 769 385 2 ENSG00000200957.1 RNU6-801P chr6 19642425 19642529 - snRNA KNOWN NA 105 105 1 ENSG00000237404.1 RP3-471C18.2 chr6 19689825 19753113 - lincRNA NOVEL OTTHUMG00000014332.1 63289 357 6 ENSG00000227116.1 RP3-471C18.1 chr6 19730427 19734567 - lincRNA NOVEL OTTHUMG00000014331.1 4141 470 2 ENSG00000228412.5 RP4-625H18.2 chr6 19802164 19804752 - lincRNA NOVEL OTTHUMG00000014330.2 2589 2301 12 ENSG00000172201.9 ID4 chr6 19837386 19840684 + protein_coding KNOWN OTTHUMG00000014333.1 3299 2344 10 ENSG00000229700.1 RP1-130G2.1 chr6 20042455 20042940 - processed_pseudogene KNOWN OTTHUMG00000016195.1 486 486 1 ENSG00000172197.10 MBOAT1 chr6 20102145 20212399 - protein_coding KNOWN OTTHUMG00000014334.1 110255 1794 13 ENSG00000227803.2 RP11-239H6.2 chr6 20212087 20317739 + antisense NOVEL OTTHUMG00000014335.2 105653 380 3 ENSG00000177414.12 UBE2U chr1 64203627 64267368 + protein_coding KNOWN OTTHUMG00000009023.5 63742 1838 43 ENSG00000112242.13 E2F3 chr6 20401906 20493715 + protein_coding KNOWN OTTHUMG00000016389.2 91810 5164 19 ENSG00000240869.3 RN7SL128P chr6 20421583 20421887 - misc_RNA KNOWN NA 305 305 1 ENSG00000281428.1 AL136303.2 chr6 20421686 20421749 - miRNA NOVEL NA 64 64 1 ENSG00000252949.1 AL136303.1 chr6 20422318 20422401 + miRNA NOVEL NA 84 84 1 ENSG00000224707.1 E2F3-IT1 chr6 20437821 20440178 + sense_intronic NOVEL OTTHUMG00000014337.1 2358 400 2 ENSG00000222431.1 RNU6-141P chr6 20452369 20452473 - snRNA KNOWN NA 105 105 1 ENSG00000201683.1 Y_RNA chr6 20500175 20500276 + misc_RNA NOVEL NA 102 102 1 ENSG00000145996.10 CDKAL1 chr6 20534457 21232404 + protein_coding KNOWN OTTHUMG00000014340.1 697948 4602 39 ENSG00000225832.1 RP3-348I23.3 chr6 20722328 20723655 - processed_pseudogene KNOWN OTTHUMG00000014338.1 1328 332 2 ENSG00000233848.1 RP3-348I23.2 chr6 20756103 20800694 - antisense NOVEL OTTHUMG00000014339.1 44592 614 5 ENSG00000238653.1 RNU7-62P chr1 64384398 64384459 - snRNA KNOWN NA 62 62 1 ENSG00000252046.1 RNU6-150P chr6 20993474 20993568 - snRNA KNOWN NA 95 95 1 ENSG00000227089.2 RP1-135L22.1 chr6 21354411 21355296 - lincRNA NOVEL OTTHUMG00000014341.2 886 386 2 ENSG00000280989.1 LINC00581 chr6 21486061 21511895 - lincRNA KNOWN OTTHUMG00000189558.1 25835 990 4 ENSG00000231754.1 RP11-204E9.1 chr6 21522476 21523772 - lincRNA NOVEL OTTHUMG00000014342.1 1297 543 2 ENSG00000124766.5 SOX4 chr6 21592769 21598619 + protein_coding KNOWN OTTHUMG00000016101.1 5851 5851 1 ENSG00000220771.2 BOLA2P3 chr6 21602128 21602383 + processed_pseudogene KNOWN OTTHUMG00000014343.2 256 256 1 ENSG00000272168.4 CASC15 chr6 21664772 22214505 + lincRNA KNOWN OTTHUMG00000014345.4 549734 11161 47 ENSG00000280443.1 RP4-551N11.1 chr6 21822536 21822737 + TEC KNOWN OTTHUMG00000175901.1 202 202 1 ENSG00000222515.1 RN7SKP240 chr6 22085544 22085918 + misc_RNA KNOWN NA 375 375 1 ENSG00000260455.1 NBAT1 chr6 22134957 22147193 - lincRNA NOVEL OTTHUMG00000175902.1 12237 1940 3 ENSG00000158966.12 CACHD1 chr1 64470792 64693058 + protein_coding KNOWN OTTHUMG00000009030.3 222267 6345 82 ENSG00000219404.2 RP11-524C21.1 chr6 22213306 22214237 - processed_pseudogene KNOWN OTTHUMG00000014346.3 932 604 2 ENSG00000261568.1 RP11-524C21.2 chr6 22220781 22222395 + lincRNA NOVEL OTTHUMG00000175903.1 1615 1615 1 ENSG00000260049.1 RP3-404K8.2 chr6 22260424 22317798 + antisense NOVEL OTTHUMG00000173107.2 57375 341 4 ENSG00000172179.10 PRL chr6 22287244 22297501 - protein_coding KNOWN OTTHUMG00000016111.1 10258 1364 16 ENSG00000112273.6 HDGFL1 chr6 22569493 22571666 + protein_coding KNOWN OTTHUMG00000016206.1 2174 2174 1 ENSG00000228772.2 RP1-309H15.2 chr6 22589137 22593833 - lincRNA NOVEL OTTHUMG00000014347.2 4697 743 3 ENSG00000233358.2 RP1-209A6.1 chr6 22744395 23031780 - lincRNA NOVEL OTTHUMG00000014348.2 287386 871 3 ENSG00000218476.2 RP11-108N13.1 chr6 23102680 23103546 + processed_pseudogene KNOWN OTTHUMG00000014349.2 867 867 1 ENSG00000207394.1 RNU6-1060P chr6 23124981 23125087 - snRNA KNOWN NA 107 107 1 ENSG00000235743.1 RP11-439H9.1 chr6 23337711 23346560 + lincRNA NOVEL OTTHUMG00000014350.1 8850 312 4 ENSG00000264470.1 MIR4794 chr1 64579847 64579923 + miRNA KNOWN NA 77 77 1 ENSG00000219453.1 RP4-810F7.1 chr6 23649496 23649774 + processed_pseudogene KNOWN OTTHUMG00000014351.1 279 279 1 ENSG00000278128.1 RP11-440J4.2 chr6 23854444 23855457 + processed_pseudogene KNOWN OTTHUMG00000187598.1 1014 1014 1 ENSG00000218512.2 SPTLC1P2 chr6 23856698 23856818 - processed_pseudogene KNOWN OTTHUMG00000014352.2 121 121 1 ENSG00000220748.2 RP1-59B16.1 chr6 23971879 23972941 + processed_pseudogene KNOWN OTTHUMG00000016113.3 1063 1063 1 ENSG00000219582.2 HNRNPA1P58 chr6 24001824 24002430 + processed_pseudogene KNOWN OTTHUMG00000014353.2 607 607 1 ENSG00000152954.10 NRSN1 chr6 24126122 24154900 + protein_coding KNOWN OTTHUMG00000016406.2 28779 4185 23 ENSG00000251830.1 SNORD46 chr6 24166273 24166374 + snoRNA NOVEL NA 102 102 1 ENSG00000146038.10 DCDC2 chr6 24171756 24358052 - protein_coding KNOWN OTTHUMG00000016275.1 186297 4996 16 ENSG00000146049.1 KAAG1 chr6 24356903 24358284 + protein_coding KNOWN OTTHUMG00000014354.1 1382 1382 1 ENSG00000202050.1 RNU6-391P chr6 24365651 24365754 + snRNA KNOWN NA 104 104 1 ENSG00000177133.9 LINC00982 chr1 3059615 3068437 - antisense NOVEL OTTHUMG00000000563.3 8823 5600 27 ENSG00000162437.13 RAVER2 chr1 64745095 64833232 + protein_coding KNOWN OTTHUMG00000009102.5 88138 6070 32 ENSG00000124532.13 MRS2 chr6 24402908 24426194 + protein_coding KNOWN OTTHUMG00000014355.1 23287 5133 57 ENSG00000112293.13 GPLD1 chr6 24424565 24495205 - protein_coding KNOWN OTTHUMG00000016104.2 70641 4919 57 ENSG00000112294.11 ALDH5A1 chr6 24494852 24537207 + protein_coding KNOWN OTTHUMG00000014356.2 42356 5525 36 ENSG00000137261.12 KIAA0319 chr6 24544104 24646155 - protein_coding KNOWN OTTHUMG00000014358.1 102052 7172 121 ENSG00000218186.2 KRT8P43 chr6 24598012 24599790 + processed_pseudogene KNOWN OTTHUMG00000014357.2 1779 1458 2 ENSG00000280713.1 AL512385.1 chr6 24599052 24599184 - miRNA NOVEL NA 133 133 1 ENSG00000111802.12 TDP2 chr6 24649977 24667033 - protein_coding KNOWN OTTHUMG00000014360.1 17057 3082 22 ENSG00000112304.9 ACOT13 chr6 24667035 24705065 + protein_coding KNOWN OTTHUMG00000014359.2 38031 4394 10 ENSG00000272345.1 RP1-30M3.5 chr6 24700907 24701793 - antisense NOVEL OTTHUMG00000185688.1 887 887 1 ENSG00000112308.11 C6orf62 chr6 24704861 24720836 - protein_coding KNOWN OTTHUMG00000014361.1 15976 4134 10 ENSG00000162434.10 JAK1 chr1 64833229 64966504 - protein_coding KNOWN OTTHUMG00000009310.1 133276 6317 42 ENSG00000272402.1 RP1-30M3.6 chr6 24706747 24707151 + antisense NOVEL OTTHUMG00000185689.1 405 405 1 ENSG00000224164.1 RP3-369A17.4 chr6 24742302 24751921 + lincRNA NOVEL OTTHUMG00000153468.1 9620 557 5 ENSG00000218806.2 RP3-369A17.2 chr6 24750671 24751625 - processed_pseudogene KNOWN OTTHUMG00000014362.4 955 562 2 ENSG00000112312.8 GMNN chr6 24774931 24786099 + protein_coding KNOWN OTTHUMG00000014363.3 11169 2476 38 ENSG00000260286.2 C6orf229 chr6 24797321 24798896 - protein_coding NOVEL OTTHUMG00000177257.1 1576 821 4 ENSG00000111913.14 FAM65B chr6 24797373 25042168 - protein_coding KNOWN OTTHUMG00000014375.3 244796 8483 135 ENSG00000263391.1 AL512428.1 chr6 24839967 24840065 - miRNA NOVEL NA 99 99 1 ENSG00000217083.1 RP1-245M18.2 chr6 24947880 24948344 + processed_pseudogene KNOWN OTTHUMG00000014376.1 465 465 1 ENSG00000214975.4 PPIAP29 chr6 24976419 24976982 + processed_pseudogene KNOWN OTTHUMG00000014377.2 564 499 2 ENSG00000272053.1 RP11-367G6.3 chr6 25014952 25042170 - lincRNA NOVEL OTTHUMG00000185692.1 27219 1030 3 ENSG00000234784.2 RP11-182I10.1 chr1 64918443 64918683 + processed_pseudogene KNOWN OTTHUMG00000009303.2 241 241 1 ENSG00000220517.2 ASS1P1 chr6 25023247 25024483 - processed_pseudogene KNOWN OTTHUMG00000014378.2 1237 1237 1 ENSG00000244618.3 RN7SL334P chr6 25031009 25031287 - misc_RNA KNOWN NA 279 279 1 ENSG00000229313.1 RP3-425P12.5 chr6 25041839 25056664 + antisense NOVEL OTTHUMG00000014382.1 14826 577 3 ENSG00000223623.1 RP3-425P12.1 chr6 25053627 25057073 - lincRNA NOVEL OTTHUMG00000014379.1 3447 430 4 ENSG00000230372.1 RP3-425P12.2 chr6 25061625 25063507 - lincRNA NOVEL OTTHUMG00000014380.1 1883 472 3 ENSG00000168405.13 CMAHP chr6 25081068 25166555 - unitary_pseudogene KNOWN OTTHUMG00000016099.4 85488 4570 55 ENSG00000219682.4 RP3-425P12.4 chr6 25140003 25141403 + processed_pseudogene KNOWN OTTHUMG00000014381.2 1401 1401 1 ENSG00000262400.1 RP11-191A15.1 chr6 25152547 25152883 + processed_pseudogene KNOWN OTTHUMG00000014383.2 337 337 1 ENSG00000217805.2 RP11-191A15.2 chr6 25181359 25181745 + processed_pseudogene KNOWN OTTHUMG00000014384.2 387 387 1 ENSG00000264238.1 AL590084.1 chr6 25203253 25203340 + miRNA NOVEL NA 88 88 1 ENSG00000233877.2 RP11-182I10.2 chr1 64941979 64942365 + processed_pseudogene KNOWN OTTHUMG00000009305.2 387 387 1 ENSG00000219681.2 RP11-191A15.4 chr6 25218688 25219069 + processed_pseudogene KNOWN OTTHUMG00000014386.2 382 382 1 ENSG00000235733.2 RP3-522P13.3 chr6 25245356 25261411 - antisense NOVEL OTTHUMG00000014389.2 16056 745 4 ENSG00000271108.1 KATNBL1P5 chr6 25248263 25248779 + processed_pseudogene KNOWN OTTHUMG00000184546.1 517 517 1 ENSG00000216718.7 RP3-522P13.1 chr6 25261239 25261731 + processed_pseudogene KNOWN OTTHUMG00000014387.2 493 493 1 ENSG00000213972.3 RP3-522P13.2 chr6 25272200 25273751 - processed_pseudogene KNOWN OTTHUMG00000014388.2 1552 927 3 ENSG00000079691.16 LRRC16A chr6 25279078 25620530 + protein_coding KNOWN OTTHUMG00000014393.3 341453 6741 52 ENSG00000207286.1 Y_RNA chr6 25287432 25287533 - misc_RNA NOVEL NA 102 102 1 ENSG00000277593.1 AL024509.1 chr6 25326110 25326186 + miRNA NOVEL NA 77 77 1 ENSG00000207490.1 RNU6-987P chr6 25383599 25383702 + snRNA KNOWN NA 104 104 1 ENSG00000253017.1 AL160037.1 chr6 25407895 25407971 + miRNA NOVEL NA 77 77 1 ENSG00000226891.5 LINC01359 chr1 64972225 65002476 - lincRNA NOVEL OTTHUMG00000009307.2 30252 4326 17 ENSG00000079689.12 SCGN chr6 25652201 25701783 + protein_coding KNOWN OTTHUMG00000014409.1 49583 1482 30 ENSG00000217408.2 PRELID1P2 chr6 25678769 25679164 - processed_pseudogene KNOWN OTTHUMG00000014392.2 396 396 1 ENSG00000164508.4 HIST1H2AA chr6 25726132 25726527 - protein_coding KNOWN OTTHUMG00000014407.1 396 396 1 ENSG00000146047.5 HIST1H2BA chr6 25726909 25727292 + protein_coding KNOWN OTTHUMG00000014408.1 384 384 1 ENSG00000178762.4 HIST1H2BPS1 chr6 25731782 25732091 - processed_pseudogene KNOWN OTTHUMG00000014406.2 310 310 1 ENSG00000216436.2 HIST1H2APS1 chr6 25732497 25732827 + processed_pseudogene KNOWN OTTHUMG00000014405.2 331 331 1 ENSG00000280964.1 AL512384.1 chr6 25732635 25732774 - miRNA NOVEL NA 140 140 1 ENSG00000146039.9 SLC17A4 chr6 25754699 25781191 + protein_coding KNOWN OTTHUMG00000014410.1 26493 4633 32 ENSG00000124568.9 SLC17A1 chr6 25782897 25832059 - protein_coding KNOWN OTTHUMG00000016297.2 49163 2044 47 ENSG00000124564.16 SLC17A3 chr6 25833066 25882286 - protein_coding KNOWN OTTHUMG00000014412.6 49221 3594 73 ENSG00000185031.6 SLC2A3P2 chr1 64984608 64986087 - processed_pseudogene KNOWN OTTHUMG00000009309.2 1480 1480 1 ENSG00000276745.1 AL138726.1 chr6 25846628 25846728 - miRNA NOVEL NA 101 101 1 ENSG00000242387.1 HIST1H2APS2 chr6 25882026 25882395 - transcribed_processed_pseudogene KNOWN OTTHUMG00000187599.1 370 370 1 ENSG00000277410.1 RP1-139G21.4 chr6 25885419 25885751 + processed_pseudogene KNOWN OTTHUMG00000014411.2 333 333 1 ENSG00000112337.9 SLC17A2 chr6 25912754 25930726 - protein_coding KNOWN OTTHUMG00000014413.1 17973 2568 34 ENSG00000112343.10 TRIM38 chr6 25962802 25991226 + protein_coding KNOWN OTTHUMG00000014414.4 28425 9413 8 ENSG00000272558.1 U91328.21 chr6 25983812 25999167 - antisense NOVEL OTTHUMG00000185899.1 15356 354 2 ENSG00000272462.2 U91328.19 chr6 25992662 26001775 + lincRNA NOVEL OTTHUMG00000185699.2 9114 4130 2 ENSG00000272810.1 U91328.22 chr6 26013241 26013757 + lincRNA NOVEL OTTHUMG00000185901.1 517 517 1 ENSG00000224447.1 HIST1H1PS2 chr6 26016379 26016601 + unprocessed_pseudogene KNOWN OTTHUMG00000036301.1 223 223 1 ENSG00000124610.4 HIST1H1A chr6 26017085 26017732 - protein_coding KNOWN OTTHUMG00000016413.1 648 648 1 ENSG00000272506.1 RP4-535B20.4 chr1 65003470 65004087 - lincRNA NOVEL OTTHUMG00000185817.1 618 618 1 ENSG00000275714.1 HIST1H3A chr6 26020490 26020900 + protein_coding KNOWN OTTHUMG00000014418.1 411 411 1 ENSG00000278637.1 HIST1H4A chr6 26021679 26021990 + protein_coding KNOWN OTTHUMG00000014419.1 312 312 1 ENSG00000278705.1 HIST1H4B chr6 26026815 26027252 - protein_coding KNOWN OTTHUMG00000014417.2 438 438 1 ENSG00000274267.1 HIST1H3B chr6 26031650 26032060 - protein_coding KNOWN OTTHUMG00000014415.1 411 411 1 ENSG00000278463.1 HIST1H2AB chr6 26033176 26033568 - protein_coding KNOWN OTTHUMG00000014420.1 393 393 1 ENSG00000276410.2 HIST1H2BB chr6 26043227 26123904 - protein_coding KNOWN OTTHUMG00000014421.1 80678 563 3 ENSG00000234816.2 U91328.2 chr6 26043989 26044357 + unprocessed_pseudogene KNOWN OTTHUMG00000037055.1 369 369 1 ENSG00000278272.1 HIST1H3C chr6 26045411 26045821 + protein_coding KNOWN OTTHUMG00000014416.1 411 411 1 ENSG00000187837.3 HIST1H1C chr6 26055787 26056428 - protein_coding KNOWN OTTHUMG00000016140.1 642 642 1 ENSG00000010704.17 HFE chr6 26087281 26098343 + protein_coding KNOWN OTTHUMG00000016348.3 11063 5675 70 ENSG00000212257.1 RNU6-1176P chr1 65022968 65023074 - snRNA KNOWN NA 107 107 1 ENSG00000197061.4 HIST1H4C chr6 26103876 26104310 + protein_coding KNOWN OTTHUMG00000014429.2 435 435 1 ENSG00000187475.5 HIST1H1T chr6 26107419 26108136 - protein_coding KNOWN OTTHUMG00000014430.2 718 718 1 ENSG00000180596.7 HIST1H2BC chr6 26114873 26123926 - protein_coding KNOWN OTTHUMG00000014425.4 9054 834 3 ENSG00000180573.9 HIST1H2AC chr6 26124145 26139116 + protein_coding KNOWN OTTHUMG00000014428.2 14972 1668 6 ENSG00000281052.1 U91328.1 chr6 26124436 26124576 - miRNA NOVEL NA 141 141 1 ENSG00000168298.5 HIST1H1E chr6 26156391 26157050 + protein_coding KNOWN OTTHUMG00000014422.1 660 660 1 ENSG00000158373.8 HIST1H2BD chr6 26158146 26171349 + protein_coding KNOWN OTTHUMG00000014426.1 13204 871 3 ENSG00000217159.2 LARP1P1 chr6 26164072 26164363 + processed_pseudogene KNOWN OTTHUMG00000014424.2 292 292 1 ENSG00000274290.1 HIST1H2BE chr6 26183795 26184180 + protein_coding KNOWN OTTHUMG00000014427.1 386 386 1 ENSG00000277157.1 HIST1H4D chr6 26188765 26189076 - protein_coding KNOWN OTTHUMG00000014423.1 312 312 1 ENSG00000265996.1 MIR3671 chr1 65057755 65057842 - miRNA KNOWN NA 88 88 1 ENSG00000216331.1 HIST1H1PS1 chr6 26195566 26195771 + processed_pseudogene KNOWN OTTHUMG00000014431.1 206 206 1 ENSG00000197409.7 HIST1H3D chr6 26196840 26197250 - protein_coding KNOWN OTTHUMG00000014433.1 411 411 1 ENSG00000196866.2 HIST1H2AD chr6 26198851 26199243 - protein_coding KNOWN OTTHUMG00000014437.1 393 393 1 ENSG00000281823.1 AL031777.2 chr6 26198861 26198997 + miRNA NOVEL NA 137 137 1 ENSG00000277224.1 HIST1H2BF chr6 26199559 26199939 + protein_coding KNOWN OTTHUMG00000014445.1 381 381 1 ENSG00000217275.2 RP1-34B20.4 chr6 26202156 26202654 + processed_pseudogene KNOWN OTTHUMG00000014442.2 499 499 1 ENSG00000276966.1 HIST1H4E chr6 26204645 26204956 + protein_coding KNOWN OTTHUMG00000014441.1 312 312 1 ENSG00000273802.1 HIST1H2BG chr6 26216066 26216692 - protein_coding KNOWN OTTHUMG00000014446.2 627 627 1 ENSG00000277075.1 HIST1H2AE chr6 26216975 26217367 + protein_coding KNOWN OTTHUMG00000014440.1 393 393 1 ENSG00000280547.1 AL031777.1 chr6 26217220 26217357 - miRNA NOVEL NA 138 138 1 ENSG00000199135.1 MIR101-1 chr1 65058434 65058508 - miRNA KNOWN NA 75 75 1 ENSG00000277720.1 RP1-34B20.19 chr6 26219045 26219240 + processed_pseudogene KNOWN OTTHUMG00000187721.1 196 196 1 ENSG00000274750.1 HIST1H3E chr6 26225155 26225565 + protein_coding KNOWN OTTHUMG00000014434.1 411 411 1 ENSG00000218281.1 HIST1H2APS3 chr6 26233122 26233255 + processed_pseudogene KNOWN OTTHUMG00000014439.1 134 134 1 ENSG00000124575.6 HIST1H1D chr6 26234268 26234933 - protein_coding KNOWN OTTHUMG00000014432.1 666 666 1 ENSG00000274618.1 HIST1H4F chr6 26240426 26240737 + protein_coding KNOWN OTTHUMG00000014443.1 312 312 1 ENSG00000275663.1 HIST1H4G chr6 26246681 26246977 - protein_coding KNOWN OTTHUMG00000014444.1 297 297 1 ENSG00000277775.1 HIST1H3F chr6 26250195 26250605 - protein_coding KNOWN OTTHUMG00000014435.1 411 411 1 ENSG00000275713.1 HIST1H2BH chr6 26251651 26252031 + protein_coding KNOWN OTTHUMG00000014447.1 381 381 1 ENSG00000273983.1 HIST1H3G chr6 26269405 26271815 - protein_coding KNOWN OTTHUMG00000014436.2 2411 2411 1 ENSG00000218690.1 HIST1H2APS4 chr6 26272193 26272540 - processed_pseudogene KNOWN OTTHUMG00000014438.2 348 348 1 ENSG00000142611.15 PRDM16 chr1 3069168 3438621 + protein_coding KNOWN OTTHUMG00000000581.9 369454 9767 107 ENSG00000231485.1 RP4-535B20.1 chr1 65066627 65067737 - lincRNA NOVEL OTTHUMG00000009304.1 1111 310 2 ENSG00000278588.1 HIST1H2BI chr6 26272976 26273356 + protein_coding KNOWN OTTHUMG00000014448.1 381 381 1 ENSG00000158406.3 HIST1H4H chr6 26285113 26285509 - protein_coding KNOWN OTTHUMG00000014454.1 397 397 1 ENSG00000281724.1 AL021917.1 chr6 26312572 26312685 - miRNA NOVEL NA 114 114 1 ENSG00000220875.1 HIST1H3PS1 chr6 26321876 26322292 - processed_pseudogene KNOWN OTTHUMG00000014455.1 417 417 1 ENSG00000186470.12 BTN3A2 chr6 26365159 26378320 + protein_coding KNOWN OTTHUMG00000014450.5 13162 7042 116 ENSG00000124508.15 BTN2A2 chr6 26383096 26394874 + protein_coding KNOWN OTTHUMG00000014452.3 11779 6398 80 ENSG00000026950.15 BTN3A1 chr6 26402237 26415216 + protein_coding KNOWN OTTHUMG00000014449.4 12980 5547 70 ENSG00000124549.13 BTN2A3P chr6 26421391 26432383 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000014453.5 10993 4177 26 ENSG00000111801.14 BTN3A3 chr6 26440472 26453415 + protein_coding KNOWN OTTHUMG00000014451.3 12944 5658 76 ENSG00000112763.14 BTN2A1 chr6 26457904 26476621 + protein_coding KNOWN OTTHUMG00000014457.2 18718 3787 47 ENSG00000235804.2 RP4-535B20.2 chr1 65077413 65078131 - processed_pseudogene KNOWN OTTHUMG00000009306.2 719 427 2 ENSG00000124557.11 BTN1A1 chr6 26501221 26510422 + protein_coding KNOWN OTTHUMG00000016358.1 9202 2895 15 ENSG00000199289.1 RNU6-502P chr6 26519351 26519458 - snRNA KNOWN NA 108 108 1 ENSG00000228223.2 HCG11 chr6 26523450 26526579 + lincRNA NOVEL OTTHUMG00000014456.2 3130 3130 1 ENSG00000261353.1 CTA-14H9.5 chr6 26527063 26527404 + lincRNA NOVEL OTTHUMG00000175905.1 342 342 1 ENSG00000182952.4 HMGN4 chr6 26538405 26546254 + protein_coding KNOWN OTTHUMG00000014458.2 7850 1274 4 ENSG00000146109.4 ABT1 chr6 26596952 26600744 + protein_coding KNOWN OTTHUMG00000016319.2 3793 2949 3 ENSG00000275846.1 RP11-457M11.7 chr6 26602733 26606661 + lincRNA NOVEL OTTHUMG00000188367.1 3929 3929 3 ENSG00000271071.1 RP11-457M11.6 chr6 26611903 26613109 - processed_pseudogene KNOWN OTTHUMG00000184609.1 1207 1207 1 ENSG00000181315.9 ZNF322 chr6 26634383 26659752 - protein_coding KNOWN OTTHUMG00000014460.3 25370 5059 30 ENSG00000281140.1 AL513548.1 chr6 26640702 26640781 - miRNA NOVEL NA 80 80 1 ENSG00000234496.2 MRPS21P1 chr1 65092392 65092614 - processed_pseudogene KNOWN OTTHUMG00000009308.2 223 223 1 ENSG00000261584.1 RP11-457M11.5 chr6 26686241 26687964 + lincRNA NOVEL OTTHUMG00000175906.2 1724 1724 1 ENSG00000281452.1 Clostridiales-1 chr6 26761897 26762029 - sRNA NOVEL NA 133 133 1 ENSG00000241549.7 GUSBP2 chr6 26871484 26956554 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000014462.5 85071 2071 19 ENSG00000243307.2 POM121L6P chr6 26896952 26898777 + processed_pseudogene KNOWN OTTHUMG00000150352.2 1826 1826 1 ENSG00000224843.5 LINC00240 chr6 26956992 27023924 + lincRNA NOVEL OTTHUMG00000014466.2 66933 6481 12 ENSG00000272312.1 RP11-239L20.6 chr6 27001208 27001648 - lincRNA NOVEL OTTHUMG00000185708.1 441 441 1 ENSG00000238621.1 TRI-TAT2-2 chr6 27020335 27020447 + miRNA KNOWN NA 113 113 1 ENSG00000220581.1 VN1R12P chr6 27033435 27034310 - unitary_pseudogene KNOWN OTTHUMG00000014465.1 876 876 1 ENSG00000216762.1 VN1R13P chr6 27060365 27061249 - processed_pseudogene KNOWN OTTHUMG00000014467.1 885 885 1 ENSG00000219770.1 VN1R11P chr6 27083280 27084147 + unitary_pseudogene KNOWN OTTHUMG00000014472.1 868 868 1 ENSG00000162433.13 AK4 chr1 65147549 65232145 + protein_coding KNOWN OTTHUMG00000009033.2 84597 7578 43 ENSG00000222800.1 RNU2-62P chr6 27109790 27109980 - snRNA KNOWN NA 191 191 1 ENSG00000272468.1 RP1-86C11.7 chr6 27122657 27123221 - lincRNA NOVEL OTTHUMG00000185709.1 565 565 1 ENSG00000124635.8 HIST1H2BJ chr6 27125897 27132750 - protein_coding KNOWN OTTHUMG00000014470.3 6854 950 5 ENSG00000196787.3 HIST1H2AG chr6 27133042 27135291 + protein_coding KNOWN OTTHUMG00000014469.1 2250 2250 1 ENSG00000276180.1 HIST1H4I chr6 27138588 27139881 + protein_coding KNOWN OTTHUMG00000014471.1 1294 1294 1 ENSG00000197903.7 HIST1H2BK chr6 27146418 27146798 - protein_coding KNOWN OTTHUMG00000014473.1 381 381 1 ENSG00000274997.1 HIST1H2AH chr6 27147129 27147515 + protein_coding NOVEL OTTHUMG00000014468.1 387 387 1 ENSG00000280696.1 AL021807.1 chr6 27147375 27147516 - miRNA NOVEL NA 142 142 1 ENSG00000265565.1 MIR3143 chr6 27147626 27147688 + miRNA KNOWN NA 63 63 1 ENSG00000174572.3 RP11-209A2.1 chr6 27211244 27211913 + processed_pseudogene KNOWN OTTHUMG00000014474.2 670 670 1 ENSG00000231622.1 RP4-700A9.1 chr1 65154480 65154650 + processed_pseudogene KNOWN OTTHUMG00000009034.1 171 171 1 ENSG00000112812.14 PRSS16 chr6 27247701 27256624 + protein_coding KNOWN OTTHUMG00000016167.3 8924 5290 97 ENSG00000270935.1 XXbac-BPGBPG24O18.1 chr6 27268113 27269229 + processed_pseudogene KNOWN OTTHUMG00000184545.1 1117 1117 1 ENSG00000158553.4 POM121L2 chr6 27285903 27312170 - protein_coding KNOWN OTTHUMG00000014475.2 26268 3354 3 ENSG00000220758.4 VN1R10P chr6 27324894 27325768 + unprocessed_pseudogene KNOWN OTTHUMG00000016326.1 875 875 1 ENSG00000204789.4 ZNF204P chr6 27357825 27360221 - processed_pseudogene KNOWN OTTHUMG00000016415.1 2397 2397 1 ENSG00000124613.7 ZNF391 chr6 27374615 27403904 + protein_coding KNOWN OTTHUMG00000014477.3 29290 4834 12 ENSG00000271755.1 RP1-153G14.4 chr6 27404010 27406964 - lincRNA NOVEL OTTHUMG00000185710.1 2955 2955 1 ENSG00000237154.2 MCFD2P1 chr6 27407697 27407996 + processed_pseudogene KNOWN OTTHUMG00000014476.2 300 300 1 ENSG00000096654.14 ZNF184 chr6 27450743 27473118 - protein_coding KNOWN OTTHUMG00000014478.1 22376 3122 12 ENSG00000280950.1 AL021918.2 chr6 27495813 27495929 + miRNA NOVEL NA 117 117 1 ENSG00000116675.14 DNAJC6 chr1 65248219 65415869 + protein_coding KNOWN OTTHUMG00000009066.2 167651 6954 84 ENSG00000278332.1 XXbac-BPGBPG34I8.2 chr6 27510501 27510694 + processed_pseudogene KNOWN OTTHUMG00000187603.1 194 194 1 ENSG00000270666.1 XXbac-BPGBPG34I8.1 chr6 27515039 27515274 - processed_pseudogene KNOWN OTTHUMG00000184605.2 236 236 1 ENSG00000218347.2 HNRNPA1P1 chr6 27523076 27524339 + processed_pseudogene KNOWN OTTHUMG00000014479.2 1264 944 2 ENSG00000280871.1 AL021918.1 chr6 27545669 27545777 + miRNA NOVEL NA 109 109 1 ENSG00000219738.2 XXbac-BPG34I8.3 chr6 27560822 27561744 - processed_pseudogene KNOWN OTTHUMG00000014480.2 923 572 2 ENSG00000206671.1 RNU6-471P chr6 27596412 27596517 + snRNA KNOWN NA 106 106 1 ENSG00000238648.1 TRI-TAT2-3 chr6 27631409 27631532 + miRNA KNOWN NA 124 124 1 ENSG00000216676.2 RP1-15D7.1 chr6 27652602 27652825 - processed_pseudogene KNOWN OTTHUMG00000016339.2 224 224 1 ENSG00000276793.1 AL031229.1 chr6 27666481 27666589 + miRNA NOVEL NA 109 109 1 ENSG00000281706.1 LINC01012 chr6 27694035 27710222 + lincRNA KNOWN OTTHUMG00000189539.1 16188 3490 12 ENSG00000229294.1 RP5-1044H5.1 chr1 65279456 65306521 - antisense NOVEL OTTHUMG00000009067.1 27066 512 2 ENSG00000216915.2 RP1-97D16.1 chr6 27737000 27738494 - processed_pseudogene KNOWN OTTHUMG00000014481.2 1495 1495 1 ENSG00000218069.2 RSL24D1P1 chr6 27780619 27781111 - processed_pseudogene KNOWN OTTHUMG00000014482.2 493 493 1 ENSG00000217862.2 HIST1H4PS1 chr6 27807075 27807339 + processed_pseudogene KNOWN OTTHUMG00000016429.2 265 265 1 ENSG00000185130.5 HIST1H2BL chr6 27807444 27807931 - protein_coding KNOWN OTTHUMG00000014485.1 488 488 1 ENSG00000196747.4 HIST1H2AI chr6 27808199 27808701 + protein_coding KNOWN OTTHUMG00000014484.1 503 503 1 ENSG00000281258.1 AL009179.1 chr6 27808413 27808553 - miRNA NOVEL NA 141 141 1 ENSG00000278828.1 HIST1H3H chr6 27810064 27811300 + protein_coding KNOWN OTTHUMG00000014483.1 1237 1237 1 ENSG00000276368.1 HIST1H2AJ chr6 27814354 27814740 - protein_coding KNOWN OTTHUMG00000014486.1 387 387 1 ENSG00000280826.1 AL049822.1 chr6 27814397 27814537 + miRNA NOVEL NA 141 141 1 ENSG00000273703.1 HIST1H2BM chr6 27815044 27815424 + protein_coding KNOWN OTTHUMG00000014489.1 381 381 1 ENSG00000234144.1 COX6CP13 chr1 65298755 65298980 - processed_pseudogene KNOWN OTTHUMG00000009068.1 226 226 1 ENSG00000197238.4 HIST1H4J chr6 27824108 27824480 + protein_coding KNOWN OTTHUMG00000014487.1 373 373 1 ENSG00000273542.1 HIST1H4K chr6 27831216 27831527 - protein_coding KNOWN OTTHUMG00000014488.1 312 312 1 ENSG00000233822.4 HIST1H2BN chr6 27837760 27865798 + protein_coding KNOWN OTTHUMG00000016397.2 28039 5477 9 ENSG00000275221.1 HIST1H2AK chr6 27837947 27838339 - protein_coding KNOWN OTTHUMG00000016382.1 393 393 1 ENSG00000281435.1 Z98744.1 chr6 27837957 27838094 + miRNA NOVEL NA 138 138 1 ENSG00000217646.1 HIST1H2BPS2 chr6 27864062 27864401 - processed_pseudogene KNOWN OTTHUMG00000014491.1 340 340 1 ENSG00000276903.1 HIST1H2AL chr6 27865355 27865747 + protein_coding KNOWN OTTHUMG00000014492.1 393 393 1 ENSG00000281512.1 Z98744.2 chr6 27865600 27865738 - miRNA NOVEL NA 139 139 1 ENSG00000184357.4 HIST1H1B chr6 27866849 27867529 - protein_coding KNOWN OTTHUMG00000016139.1 681 681 1 ENSG00000275379.1 HIST1H3I chr6 27871905 27872315 - protein_coding KNOWN OTTHUMG00000016184.1 411 411 1 ENSG00000222624.1 RNU2-15P chr1 65415816 65416006 + snRNA KNOWN NA 191 191 1 ENSG00000275126.1 HIST1H4L chr6 27873199 27873510 - protein_coding KNOWN OTTHUMG00000016211.1 312 312 1 ENSG00000197153.4 HIST1H3J chr6 27890382 27893106 - protein_coding KNOWN OTTHUMG00000016185.2 2725 775 3 ENSG00000278677.1 HIST1H2AM chr6 27892757 27893149 - protein_coding KNOWN OTTHUMG00000014494.1 393 393 1 ENSG00000281851.1 Z98744.3 chr6 27892767 27892904 + miRNA NOVEL NA 138 138 1 ENSG00000274641.1 HIST1H2BO chr6 27893463 27893843 + protein_coding KNOWN OTTHUMG00000014493.1 381 381 1 ENSG00000238610.1 RNU7-26P chr6 27897504 27897566 - snRNA KNOWN NA 63 63 1 ENSG00000168131.4 OR2B2 chr6 27911185 27912396 - protein_coding KNOWN OTTHUMG00000014495.2 1212 1212 1 ENSG00000168126.3 OR2W6P chr6 27937465 27938403 + unprocessed_pseudogene KNOWN OTTHUMG00000014496.1 939 939 1 ENSG00000124657.1 OR2B6 chr6 27957241 27958182 + protein_coding KNOWN OTTHUMG00000014497.1 942 942 1 ENSG00000214374.2 RPLP2P1 chr6 27965175 27965514 + processed_pseudogene KNOWN OTTHUMG00000014498.2 340 340 1 ENSG00000213625.7 LEPROT chr1 65420587 65436007 + protein_coding KNOWN OTTHUMG00000009065.4 15421 5237 22 ENSG00000216629.1 OR2W4P chr6 27977150 27978075 + unprocessed_pseudogene KNOWN OTTHUMG00000014499.1 926 926 1 ENSG00000217539.2 IQCB2P chr6 28010723 28012355 + processed_pseudogene KNOWN OTTHUMG00000014501.2 1633 1633 1 ENSG00000199851.2 U3 chr6 28015568 28015777 + snoRNA NOVEL NA 210 210 1 ENSG00000217315.1 OR2W2P chr6 28033947 28034855 + unprocessed_pseudogene KNOWN OTTHUMG00000014500.1 909 909 1 ENSG00000187763.3 OR2B7P chr6 28046434 28047367 + unprocessed_pseudogene KNOWN OTTHUMG00000014504.1 934 934 1 ENSG00000182477.5 OR2B8P chr6 28053228 28054165 - unprocessed_pseudogene KNOWN OTTHUMG00000014507.1 938 938 1 ENSG00000220721.1 OR1F12 chr6 28073316 28074233 + unprocessed_pseudogene KNOWN OTTHUMG00000014506.2 918 918 1 ENSG00000272009.1 RP1-313I6.12 chr6 28078792 28081130 - antisense NOVEL OTTHUMG00000185713.1 2339 686 2 ENSG00000197279.3 ZNF165 chr6 28080975 28089563 + protein_coding KNOWN OTTHUMG00000014505.1 8589 2107 4 ENSG00000219891.2 ZSCAN12P1 chr6 28091154 28093664 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000014502.2 2511 1657 3 ENSG00000226286.1 RP1-163G9.2 chr1 3132927 3133709 - antisense NOVEL OTTHUMG00000000624.1 783 469 2 ENSG00000116678.17 LEPR chr1 65420652 65641559 + protein_coding KNOWN OTTHUMG00000009115.1 220908 11370 138 ENSG00000219392.1 RP1-265C24.5 chr6 28115628 28116551 + unprocessed_pseudogene KNOWN OTTHUMG00000014508.1 924 924 1 ENSG00000269293.2 ZSCAN16-AS1 chr6 28121795 28137293 - antisense NOVEL OTTHUMG00000184041.1 15499 2163 5 ENSG00000196812.4 ZSCAN16 chr6 28124560 28130082 + protein_coding KNOWN OTTHUMG00000014509.1 5523 1328 4 ENSG00000261839.1 RP1-265C24.8 chr6 28136849 28139678 + lincRNA NOVEL OTTHUMG00000175907.1 2830 2830 1 ENSG00000198315.9 ZKSCAN8 chr6 28141910 28159472 + protein_coding KNOWN OTTHUMG00000014510.2 17563 7565 26 ENSG00000226314.6 ZNF192P1 chr6 28161781 28169594 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000014513.2 7814 2535 15 ENSG00000280107.1 AL022393.9 chr6 28170845 28172521 + TEC KNOWN OTTHUMG00000175908.1 1677 1677 1 ENSG00000216901.1 AL022393.7 chr6 28176188 28176674 + unprocessed_pseudogene KNOWN OTTHUMG00000014516.1 487 487 1 ENSG00000218016.2 ZNF192P2 chr6 28188050 28189432 + unprocessed_pseudogene KNOWN OTTHUMG00000014514.2 1383 1383 1 ENSG00000176933.5 TOB2P1 chr6 28217643 28218634 - processed_pseudogene KNOWN OTTHUMG00000014512.1 992 992 1 ENSG00000237852.1 RP4-630A11.3 chr1 65486406 65494188 + sense_intronic NOVEL OTTHUMG00000009114.1 7783 423 2 ENSG00000137185.10 ZSCAN9 chr6 28224886 28233482 + protein_coding KNOWN OTTHUMG00000014515.3 8597 3705 28 ENSG00000187626.8 ZKSCAN4 chr6 28244623 28252224 - protein_coding KNOWN OTTHUMG00000014511.1 7602 2375 5 ENSG00000189134.3 NKAPL chr6 28259320 28260958 + protein_coding KNOWN OTTHUMG00000014517.1 1639 1639 1 ENSG00000197062.10 ZSCAN26 chr6 28267010 28278224 + protein_coding KNOWN OTTHUMG00000014519.4 11215 2933 25 ENSG00000276302.1 RP5-874C20.8 chr6 28267121 28281580 + protein_coding PUTATIVE OTTHUMG00000188236.1 14460 557 4 ENSG00000137338.5 PGBD1 chr6 28281572 28302549 + protein_coding KNOWN OTTHUMG00000014520.2 20978 3100 7 ENSG00000273712.1 RP5-874C20.7 chr6 28315613 28315883 - processed_pseudogene KNOWN OTTHUMG00000187604.1 271 271 1 ENSG00000270326.1 RP5-874C20.6 chr6 28319660 28319852 - processed_pseudogene KNOWN OTTHUMG00000184600.1 193 193 1 ENSG00000235109.6 ZSCAN31 chr6 28324693 28356271 - protein_coding KNOWN OTTHUMG00000014518.3 31579 4957 74 ENSG00000189298.12 ZKSCAN3 chr6 28349914 28369177 + protein_coding KNOWN OTTHUMG00000014521.3 19264 4842 18 ENSG00000224570.1 RP11-430H12.2 chr1 65576129 65578380 - processed_pseudogene KNOWN OTTHUMG00000009116.1 2252 1797 2 ENSG00000158691.13 ZSCAN12 chr6 28378955 28399734 - protein_coding KNOWN OTTHUMG00000014522.1 20780 5495 11 ENSG00000251877.1 RNU2-45P chr6 28410270 28410456 + snRNA KNOWN NA 187 187 1 ENSG00000187987.8 ZSCAN23 chr6 28431930 28443502 - protein_coding KNOWN OTTHUMG00000016346.3 11573 3283 11 ENSG00000231162.4 COX11P1 chr6 28446973 28447807 + processed_pseudogene KNOWN OTTHUMG00000014524.1 835 835 1 ENSG00000219262.1 OR2E1P chr6 28455648 28456141 - unprocessed_pseudogene KNOWN OTTHUMG00000014523.1 494 494 1 ENSG00000198704.8 GPX6 chr6 28503296 28528215 - protein_coding KNOWN OTTHUMG00000044828.6 24920 2018 20 ENSG00000224586.5 GPX5 chr6 28525925 28534952 + protein_coding KNOWN OTTHUMG00000016307.2 9028 2002 19 ENSG00000232040.2 ZBED9 chr6 28571630 28616212 - protein_coding KNOWN OTTHUMG00000016237.5 44583 5824 13 ENSG00000246350.1 RP5-1186N24.3 chr6 28587378 28591747 + antisense NOVEL OTTHUMG00000166291.1 4370 2874 2 ENSG00000271440.1 RP11-373N24.2 chr6 28633381 28633594 - processed_pseudogene KNOWN OTTHUMG00000184592.1 214 214 1 ENSG00000239319.3 RN7SL854P chr1 65761058 65761352 - misc_RNA KNOWN NA 295 295 1 ENSG00000235570.1 LINC00533 chr6 28648286 28649066 - lincRNA NOVEL OTTHUMG00000016245.1 781 537 2 ENSG00000265764.2 AL121932.1 chr6 28658234 28658317 - miRNA NOVEL NA 84 84 1 ENSG00000237425.1 RPSAP2 chr6 28732017 28732904 + processed_pseudogene KNOWN OTTHUMG00000147353.2 888 888 1 ENSG00000235559.1 NOP56P1 chr6 28783633 28784004 - processed_pseudogene KNOWN OTTHUMG00000031045.3 372 372 1 ENSG00000225173.1 XXbac-BPG308K3.5 chr6 28837869 28839006 - lincRNA NOVEL OTTHUMG00000084883.1 1138 709 2 ENSG00000225595.2 XXbac-BPG308K3.6 chr6 28859625 28864630 - lincRNA NOVEL OTTHUMG00000084882.2 5006 3098 6 ENSG00000213916.2 RPL13P chr6 28861416 28862047 + processed_pseudogene KNOWN OTTHUMG00000031243.2 632 632 1 ENSG00000233366.1 ZNF90P2 chr6 28888832 28889906 - processed_pseudogene KNOWN OTTHUMG00000031240.2 1075 1075 1 ENSG00000224157.1 HCG14 chr6 28896530 28897322 + antisense KNOWN OTTHUMG00000031281.1 793 413 2 ENSG00000204713.9 TRIM27 chr6 28903002 28923989 - protein_coding KNOWN OTTHUMG00000031215.2 20988 7986 35 ENSG00000184588.16 PDE4B chr1 65792514 66374579 + protein_coding KNOWN OTTHUMG00000009088.4 582066 8644 120 ENSG00000212240.1 RNU6-930P chr6 28915645 28915744 + snRNA KNOWN NA 100 100 1 ENSG00000204709.4 LINC01556 chr6 28943877 28944537 + lincRNA KNOWN OTTHUMG00000031148.1 661 466 2 ENSG00000228666.1 KRT18P1 chr6 28969130 28970460 - processed_pseudogene KNOWN OTTHUMG00000031205.2 1331 1331 1 ENSG00000263426.2 RN7SL471P chr6 28977475 28977773 + misc_RNA KNOWN NA 299 299 1 ENSG00000280628.1 AL662791.1 chr6 28977613 28977709 + miRNA NOVEL NA 97 97 1 ENSG00000227214.2 HCG15 chr6 28986203 28987484 + antisense KNOWN OTTHUMG00000031267.1 1282 1032 3 ENSG00000244349.1 HCG16 chr6 28986800 28988536 + antisense KNOWN OTTHUMG00000031270.1 1737 317 2 ENSG00000197935.6 ZNF311 chr6 28994785 29005316 - protein_coding KNOWN OTTHUMG00000031292.3 10532 3176 13 ENSG00000223677.1 OR2AD1P chr6 29026680 29027607 - unprocessed_pseudogene KNOWN OTTHUMG00000031262.1 928 928 1 ENSG00000277661.3 XXbac-BPG258E24.10 chr6 29036021 29076524 + antisense NOVEL OTTHUMG00000189247.1 40504 876 11 ENSG00000227466.1 RP11-397C12.1 chr1 66042500 66050718 - antisense NOVEL OTTHUMG00000009087.1 8219 456 3 ENSG00000204704.2 OR2W1 chr6 29044213 29045240 - protein_coding KNOWN OTTHUMG00000031048.2 1028 1028 1 ENSG00000236909.1 OR2P1P chr6 29071824 29072599 - unprocessed_pseudogene KNOWN OTTHUMG00000031042.3 776 776 1 ENSG00000228364.1 SAR1P1 chr6 29076573 29077168 - processed_pseudogene NOVEL OTTHUMG00000031279.1 596 596 1 ENSG00000204703.4 OR2B3 chr6 29086307 29087313 - protein_coding KNOWN OTTHUMG00000031226.2 1007 1007 1 ENSG00000204702.4 OR2J1 chr6 29100609 29101881 + polymorphic_pseudogene KNOWN OTTHUMG00000031280.3 1273 1273 1 ENSG00000204701.1 OR2J3 chr6 29111891 29112826 + protein_coding KNOWN OTTHUMG00000031092.2 936 936 1 ENSG00000227206.1 XXbac-BCX196D17.5 chr6 29124210 29128908 + lincRNA NOVEL OTTHUMG00000085915.1 4699 389 2 ENSG00000203492.3 OR2N1P chr6 29137880 29138816 - unprocessed_pseudogene KNOWN OTTHUMG00000031224.1 937 937 1 ENSG00000204700.4 OR2J2 chr6 29173303 29174574 + protein_coding KNOWN OTTHUMG00000031091.2 1272 1272 1 ENSG00000224233.1 OR2J4P chr6 29181510 29182445 + unprocessed_pseudogene KNOWN OTTHUMG00000031062.1 936 936 1 ENSG00000223152.1 RNU4-88P chr1 66094461 66094546 - snRNA KNOWN NA 86 86 1 ENSG00000273960.1 AL645937.1 chr6 29201768 29201834 + miRNA NOVEL NA 67 67 1 ENSG00000230598.1 OR2H4P chr6 29215236 29216179 + unprocessed_pseudogene KNOWN OTTHUMG00000031233.2 944 944 1 ENSG00000232505.2 XXbac-BPG308J9.3 chr6 29223973 29290440 + lincRNA NOVEL OTTHUMG00000085065.2 66468 779 5 ENSG00000213911.2 OR2G1P chr6 29229227 29230157 - unprocessed_pseudogene KNOWN OTTHUMG00000031115.2 931 931 1 ENSG00000204697.3 OR2U1P chr6 29262703 29264079 - unprocessed_pseudogene KNOWN OTTHUMG00000031040.2 1377 879 2 ENSG00000242524.1 OR2U2P chr6 29268462 29269421 - unprocessed_pseudogene KNOWN OTTHUMG00000031055.1 960 960 1 ENSG00000197171.5 OR2B4P chr6 29290711 29291653 + unprocessed_pseudogene KNOWN OTTHUMG00000031195.1 943 943 1 ENSG00000204695.3 OR14J1 chr6 29306690 29307655 + protein_coding KNOWN OTTHUMG00000031184.2 966 966 1 ENSG00000230056.1 DDX6P1 chr6 29329626 29331061 - processed_pseudogene KNOWN OTTHUMG00000031293.2 1436 1436 1 ENSG00000243729.3 OR5V1 chr6 29355230 29431967 - protein_coding KNOWN OTTHUMG00000031199.3 76738 1266 5 ENSG00000118473.20 SGIP1 chr1 66533383 66748299 + protein_coding KNOWN OTTHUMG00000009161.7 214917 10477 133 ENSG00000112462.8 OR12D3 chr6 29373423 29375291 - protein_coding KNOWN OTTHUMG00000031051.3 1869 1869 1 ENSG00000280236.1 OR12D2 chr6 29396555 29397671 + polymorphic_pseudogene KNOWN OTTHUMG00000031049.2 1117 1117 2 ENSG00000168787.6 OR12D2 chr6 29396700 29397623 + protein_coding KNOWN NA 924 924 1 ENSG00000251608.1 OR12D1 chr6 29417280 29418226 + polymorphic_pseudogene KNOWN OTTHUMG00000031141.4 947 947 1 ENSG00000204694.9 OR11A1 chr6 29425504 29457071 - protein_coding KNOWN OTTHUMG00000031225.2 31568 2864 8 ENSG00000206474.7 OR10C1 chr6 29439306 29440977 + polymorphic_pseudogene KNOWN OTTHUMG00000031207.2 1672 1672 2 ENSG00000279941.1 OR10C1 chr6 29440016 29440954 + protein_coding KNOWN NA 939 939 1 ENSG00000277881.1 XXbac-BPG13B8.11 chr6 29450210 29450558 + processed_pseudogene KNOWN OTTHUMG00000187605.1 349 349 1 ENSG00000204688.8 OR2H1 chr6 29457181 29464328 + protein_coding KNOWN OTTHUMG00000031050.4 7148 3708 20 ENSG00000225797.2 UBDP1 chr6 29464596 29469806 - unprocessed_pseudogene KNOWN OTTHUMG00000031258.3 5211 382 2 ENSG00000264720.2 AL139147.1 chr1 66628415 66628525 + miRNA NOVEL NA 111 111 1 ENSG00000230164.1 MAS1LP1 chr6 29475025 29476071 - unprocessed_pseudogene KNOWN OTTHUMG00000086553.1 1047 1047 1 ENSG00000204687.4 MAS1L chr6 29486697 29487956 - protein_coding KNOWN OTTHUMG00000031089.2 1260 1260 1 ENSG00000213900.2 RPS17P1 chr6 29489271 29489676 - processed_pseudogene KNOWN OTTHUMG00000031086.1 406 406 1 ENSG00000229274.1 XXbac-BPG13B8.10 chr6 29497509 29510556 + lincRNA NOVEL OTTHUMG00000086581.1 13048 877 4 ENSG00000224582.4 LINC01015 chr6 29529420 29533665 + antisense NOVEL OTTHUMG00000065812.3 4246 2874 7 ENSG00000229281.1 GPR53P chr6 29537704 29538787 - unprocessed_pseudogene KNOWN OTTHUMG00000031126.4 1084 1084 1 ENSG00000237988.3 OR2I1P chr6 29553219 29554166 + unprocessed_pseudogene KNOWN OTTHUMG00000031230.2 948 948 1 ENSG00000213886.3 UBD chr6 29555515 29559925 - protein_coding KNOWN OTTHUMG00000031289.3 4411 1087 2 ENSG00000204681.9 GABBR1 chr6 29555629 29633976 - protein_coding KNOWN OTTHUMG00000031095.7 78348 8470 204 ENSG00000232173.2 OR2H5P chr6 29573909 29574836 + unprocessed_pseudogene KNOWN OTTHUMG00000031261.1 928 928 1 ENSG00000248458.2 RP4-598P13.1 chr1 66665864 66677027 - antisense NOVEL OTTHUMG00000187054.1 11164 1156 2 ENSG00000227609.2 TMEM183AP1 chr6 29577459 29577748 + processed_pseudogene KNOWN OTTHUMG00000086663.1 290 290 1 ENSG00000201330.1 SNORD32B chr6 29582249 29582332 + snoRNA KNOWN NA 84 84 1 ENSG00000231301.1 RPL13AP chr6 29582508 29583025 + processed_pseudogene KNOWN OTTHUMG00000031039.1 518 518 1 ENSG00000204657.3 OR2H2 chr6 29587455 29589038 + protein_coding KNOWN OTTHUMG00000031052.2 1584 1584 1 ENSG00000235238.1 SUMO2P1 chr6 29636060 29636343 - processed_pseudogene KNOWN OTTHUMG00000031140.1 284 284 1 ENSG00000204655.10 MOG chr6 29656981 29672372 + protein_coding KNOWN OTTHUMG00000031099.5 15392 3196 115 ENSG00000204644.8 ZFP57 chr6 29672392 29681110 - protein_coding KNOWN OTTHUMG00000031158.4 8719 2149 14 ENSG00000233916.1 ZDHHC20P1 chr6 29708125 29708547 - processed_pseudogene KNOWN OTTHUMG00000086707.1 423 423 1 ENSG00000204642.12 HLA-F chr6 29722775 29738528 + protein_coding KNOWN OTTHUMG00000031156.5 15754 4342 68 ENSG00000225864.1 HCG4P11 chr6 29722981 29723971 - unprocessed_pseudogene KNOWN OTTHUMG00000130503.1 991 991 1 ENSG00000279928.1 FO538757.3 chr1 182393 184158 + protein_coding KNOWN NA 1766 718 3 ENSG00000279839.1 RP11-193J6.1 chr1 3205988 3208664 + TEC KNOWN OTTHUMG00000185775.1 2677 2677 1 ENSG00000221655.2 AL354978.1 chr1 66730967 66731058 - miRNA NOVEL NA 92 92 1 ENSG00000214922.8 HLA-F-AS1 chr6 29726601 29749049 - processed_transcript NOVEL OTTHUMG00000185970.1 22449 4179 14 ENSG00000239257.1 RPL23AP1 chr6 29726669 29727139 - transcribed_processed_pseudogene KNOWN OTTHUMG00000031098.2 471 471 1 ENSG00000273340.1 MICE chr6 29741731 29748969 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000031084.4 7239 1157 6 ENSG00000227758.1 HCG9P5 chr6 29748289 29748513 + unprocessed_pseudogene KNOWN OTTHUMG00000031159.2 225 225 1 ENSG00000199290.1 Y_RNA chr6 29750371 29750472 + misc_RNA NOVEL NA 102 102 1 ENSG00000235821.1 IFITM4P chr6 29750729 29751148 - processed_pseudogene KNOWN OTTHUMG00000031097.2 420 420 1 ENSG00000272236.1 XXbac-BPG170G13.32 chr6 29751965 29752207 - lincRNA NOVEL OTTHUMG00000185717.1 243 243 1 ENSG00000270896.1 XXbac-BPG170G13.31 chr6 29763258 29763392 - processed_pseudogene KNOWN OTTHUMG00000184571.1 135 135 1 ENSG00000181126.12 HLA-V chr6 29790954 29797811 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000031277.4 6858 5662 13 ENSG00000176998.4 HCG4 chr6 29791753 29792750 - unprocessed_pseudogene KNOWN OTTHUMG00000035423.2 998 998 1 ENSG00000152760.8 TCTEX1D1 chr1 66752459 66778787 + protein_coding KNOWN OTTHUMG00000009162.3 26329 3100 24 ENSG00000261548.1 HLA-P chr6 29800415 29802425 + unprocessed_pseudogene KNOWN OTTHUMG00000172781.1 2011 747 5 ENSG00000213880.3 RPL7AP7 chr6 29803195 29803991 - processed_pseudogene KNOWN OTTHUMG00000031297.2 797 797 1 ENSG00000237042.1 MICG chr6 29812565 29812696 - unprocessed_pseudogene KNOWN OTTHUMG00000031087.2 132 132 1 ENSG00000204632.10 HLA-G chr6 29826967 29831125 + protein_coding KNOWN OTTHUMG00000031157.7 4159 1763 47 ENSG00000229142.1 HCG4P8 chr6 29827385 29828364 - unprocessed_pseudogene KNOWN OTTHUMG00000130505.1 980 980 1 ENSG00000233265.1 MICF chr6 29852363 29852491 - unprocessed_pseudogene KNOWN OTTHUMG00000031085.2 129 129 1 ENSG00000281831.1 HCP5B chr6 29871895 29873783 - lincRNA KNOWN OTTHUMG00000189541.1 1889 1889 1 ENSG00000230521.1 HCG4P7 chr6 29887294 29888268 - unprocessed_pseudogene KNOWN OTTHUMG00000130509.1 975 975 1 ENSG00000206341.7 HLA-H chr6 29887752 29890482 + unprocessed_pseudogene KNOWN OTTHUMG00000031160.2 2731 1096 7 ENSG00000231130.1 HLA-T chr6 29896654 29897786 + unprocessed_pseudogene KNOWN OTTHUMG00000031232.2 1133 450 4 ENSG00000172410.4 INSL5 chr1 66797741 66801256 - protein_coding KNOWN OTTHUMG00000009164.1 3516 715 2 ENSG00000233677.1 DDX39BP1 chr6 29906543 29906909 + unprocessed_pseudogene KNOWN OTTHUMG00000130504.1 367 192 2 ENSG00000235963.1 MCCD1P1 chr6 29907783 29908645 - unprocessed_pseudogene KNOWN OTTHUMG00000130506.1 863 328 2 ENSG00000227262.3 HCG4B chr6 29925983 29926973 - unprocessed_pseudogene KNOWN OTTHUMG00000031188.3 991 991 1 ENSG00000230795.2 HLA-K chr6 29926459 29929232 + unprocessed_pseudogene KNOWN OTTHUMG00000031162.2 2774 1037 6 ENSG00000228078.1 HLA-U chr6 29934101 29934286 + unprocessed_pseudogene KNOWN OTTHUMG00000031245.2 186 186 1 ENSG00000206503.10 HLA-A chr6 29941260 29945884 + protein_coding KNOWN OTTHUMG00000130501.1 4625 2710 57 ENSG00000227766.1 HCG4P5 chr6 29942075 29943067 - unprocessed_pseudogene KNOWN OTTHUMG00000031152.2 993 993 1 ENSG00000235290.1 HLA-W chr6 29956596 29958570 + unprocessed_pseudogene KNOWN OTTHUMG00000031242.3 1975 771 5 ENSG00000229390.1 MICD chr6 29970801 29972464 - unprocessed_pseudogene KNOWN OTTHUMG00000031082.2 1664 813 3 ENSG00000204625.9 HCG9 chr6 29975112 29978410 + lincRNA KNOWN OTTHUMG00000031119.5 3299 700 5 ENSG00000152763.15 WDR78 chr1 66812885 66924887 - protein_coding KNOWN OTTHUMG00000009165.5 112003 6704 80 ENSG00000238024.1 DDX39BP2 chr6 29993209 29993605 + unprocessed_pseudogene KNOWN OTTHUMG00000130507.1 397 258 2 ENSG00000224312.1 MCCD1P2 chr6 29994437 29995314 - unprocessed_pseudogene KNOWN OTTHUMG00000130500.1 878 335 2 ENSG00000204623.7 ZNRD1-AS1 chr6 30001011 30061640 - antisense KNOWN OTTHUMG00000031109.3 60630 20801 48 ENSG00000237669.1 HCG4P3 chr6 30006121 30007116 - unprocessed_pseudogene KNOWN OTTHUMG00000130502.1 996 996 1 ENSG00000204622.9 HLA-J chr6 30006583 30009956 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000031161.2 3374 1634 25 ENSG00000232757.1 ETF1P1 chr6 30031713 30033003 + processed_pseudogene KNOWN OTTHUMG00000031163.2 1291 984 2 ENSG00000278104.1 ZNRD1-AS1_1 chr6 30035916 30035983 + misc_RNA NOVEL NA 68 68 1 ENSG00000275856.1 ZNRD1-AS1_2 chr6 30058115 30058190 + misc_RNA NOVEL NA 76 76 1 ENSG00000066379.13 ZNRD1 chr6 30058899 30064909 + protein_coding KNOWN OTTHUMG00000031149.2 6011 3672 25 ENSG00000278773.1 ZNRD1-AS1_3 chr6 30061080 30061183 + misc_RNA NOVEL NA 104 104 1 ENSG00000231080.1 RP11-342H21.2 chr1 66826942 66828558 + antisense NOVEL OTTHUMG00000009166.1 1617 861 2 ENSG00000204619.6 PPP1R11 chr6 30066709 30070333 + protein_coding KNOWN OTTHUMG00000031260.3 3625 2538 20 ENSG00000204618.7 RNF39 chr6 30070266 30075887 - protein_coding KNOWN OTTHUMG00000031288.3 5622 2206 9 ENSG00000252901.1 AL669914.1 chr6 30088821 30088953 - miRNA NOVEL NA 133 133 1 ENSG00000204616.9 TRIM31 chr6 30102897 30113106 - protein_coding KNOWN OTTHUMG00000031064.2 10210 3535 29 ENSG00000231226.1 TRIM31-AS1 chr6 30105240 30114724 + antisense NOVEL OTTHUMG00000130787.1 9485 549 4 ENSG00000252228.1 SNORA48 chr6 30132805 30132966 - snoRNA NOVEL NA 162 162 1 ENSG00000204614.7 TRIM40 chr6 30136108 30148735 + protein_coding KNOWN OTTHUMG00000031083.2 12628 2497 18 ENSG00000204613.9 TRIM10 chr6 30151945 30160934 - protein_coding KNOWN OTTHUMG00000031295.1 8990 3546 15 ENSG00000204610.11 TRIM15 chr6 30163206 30172696 + protein_coding KNOWN OTTHUMG00000031031.2 9491 2515 24 ENSG00000234127.7 TRIM26 chr6 30184455 30213427 - protein_coding KNOWN OTTHUMG00000031041.2 28973 4377 47 ENSG00000198160.13 MIER1 chr1 66924895 66988619 + protein_coding KNOWN OTTHUMG00000009194.3 63725 8273 131 ENSG00000233892.1 PAIP1P1 chr6 30186798 30188614 - processed_pseudogene KNOWN OTTHUMG00000034813.2 1817 1203 2 ENSG00000270604.4 HCG17 chr6 30234039 30326134 - lincRNA KNOWN OTTHUMG00000031114.2 92096 759 7 ENSG00000236475.1 TRIM26BP chr6 30238301 30242279 + unprocessed_pseudogene KNOWN OTTHUMG00000031283.2 3979 753 3 ENSG00000243753.4 HLA-L chr6 30259584 30293014 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000031164.4 33431 5505 18 ENSG00000280128.1 XXbac-BPG283O16.9 chr6 30282349 30286054 - TEC KNOWN OTTHUMG00000184109.1 3706 3706 1 ENSG00000231074.7 HCG18 chr6 30287397 30327150 - antisense KNOWN OTTHUMG00000031138.4 39754 13918 47 ENSG00000204599.13 TRIM39 chr6 30326479 30343729 + protein_coding KNOWN OTTHUMG00000031066.3 17251 4226 67 ENSG00000248167.5 TRIM39-RPP21 chr6 30328907 30346858 + protein_coding KNOWN OTTHUMG00000161144.2 17952 1702 21 ENSG00000241370.4 RPP21 chr6 30345131 30346884 + protein_coding KNOWN OTTHUMG00000031220.3 1754 1606 38 ENSG00000224372.1 HLA-N chr6 30351416 30351550 + unprocessed_pseudogene KNOWN OTTHUMG00000031167.2 135 135 1 ENSG00000116704.7 SLC35D1 chr1 66999332 67054099 - protein_coding KNOWN OTTHUMG00000009360.1 54768 6162 12 ENSG00000224486.1 HCG19P chr6 30359278 30359911 - processed_pseudogene KNOWN OTTHUMG00000031057.4 634 634 1 ENSG00000236405.1 UBQLN1P1 chr6 30363112 30364280 - processed_pseudogene KNOWN OTTHUMG00000031134.2 1169 1169 1 ENSG00000226577.1 MICC chr6 30414715 30419319 + unprocessed_pseudogene KNOWN OTTHUMG00000031078.3 4605 1055 5 ENSG00000229068.1 TMPOP1 chr6 30466452 30467994 + processed_pseudogene KNOWN OTTHUMG00000031218.2 1543 1267 2 ENSG00000224936.1 SUCLA2P1 chr6 30468882 30470251 + processed_pseudogene KNOWN OTTHUMG00000031145.2 1370 1370 1 ENSG00000236603.2 RANP1 chr6 30485940 30486590 + processed_pseudogene KNOWN OTTHUMG00000031142.1 651 651 1 ENSG00000204592.8 HLA-E chr6 30489467 30494205 + protein_coding KNOWN OTTHUMG00000031155.2 4739 2975 13 ENSG00000235781.1 XXbac-BPG249D20.9 chr6 30516266 30519217 + antisense NOVEL OTTHUMG00000132773.1 2952 851 2 ENSG00000204590.11 GNL1 chr6 30541377 30557174 - protein_coding KNOWN OTTHUMG00000031137.2 15798 8646 25 ENSG00000204576.10 PRR3 chr6 30556886 30563723 + protein_coding KNOWN OTTHUMG00000031037.2 6838 4281 20 ENSG00000203963.10 C1orf141 chr1 67092165 67231853 - protein_coding KNOWN OTTHUMG00000009406.5 139689 5022 57 ENSG00000204574.11 ABCF1 chr6 30571376 30597179 + protein_coding KNOWN OTTHUMG00000031094.6 25804 4523 91 ENSG00000216101.2 MIR877 chr6 30584312 30584425 + miRNA KNOWN NA 114 114 1 ENSG00000204569.8 PPP1R10 chr6 30600400 30618612 - protein_coding KNOWN OTTHUMG00000031259.2 18213 5215 36 ENSG00000222894.1 AL662800.1 chr6 30616229 30616305 - miRNA NOVEL NA 77 77 1 ENSG00000204568.10 MRPS18B chr6 30617709 30626395 + protein_coding KNOWN OTTHUMG00000031268.2 8687 1888 23 ENSG00000137343.16 ATAT1 chr6 30626842 30646823 + protein_coding KNOWN OTTHUMG00000031219.2 19982 4035 107 ENSG00000228415.2 PTMAP1 chr6 30633632 30633898 + processed_pseudogene KNOWN OTTHUMG00000031235.2 267 267 1 ENSG00000204564.10 C6orf136 chr6 30647039 30653210 + protein_coding KNOWN OTTHUMG00000031221.6 6172 2118 53 ENSG00000266183.1 AL662800.2 chr6 30648666 30648759 + miRNA NOVEL NA 94 94 1 ENSG00000204560.8 DHX16 chr6 30653119 30673037 - protein_coding KNOWN OTTHUMG00000031060.2 19919 4008 41 ENSG00000252433.1 SNORA31 chr1 67102645 67102779 - snoRNA NOVEL NA 135 135 1 ENSG00000146112.10 PPP1R18 chr6 30676389 30687895 - protein_coding KNOWN OTTHUMG00000031237.3 11507 4599 20 ENSG00000277346.1 AL662797.1 chr6 30684796 30684892 + miRNA NOVEL NA 97 97 1 ENSG00000137404.13 NRM chr6 30688047 30691420 - protein_coding KNOWN OTTHUMG00000031223.3 3374 2045 30 ENSG00000230449.1 RPL7P4 chr6 30696806 30697535 - processed_pseudogene KNOWN OTTHUMG00000031255.2 730 730 1 ENSG00000137337.13 MDC1 chr6 30699807 30717889 - protein_coding KNOWN OTTHUMG00000031075.2 18083 8064 46 ENSG00000224328.1 MDC1-AS1 chr6 30703067 30713184 + antisense NOVEL OTTHUMG00000133551.1 10118 738 3 ENSG00000196230.11 TUBB chr6 30720201 30725426 + protein_coding KNOWN OTTHUMG00000031059.2 5226 3359 16 ENSG00000272540.1 XXbac-BPG252P9.9 chr6 30723105 30723877 - antisense NOVEL OTTHUMG00000185724.1 773 773 1 ENSG00000137312.13 FLOT1 chr6 30727709 30742733 - protein_coding KNOWN OTTHUMG00000031151.8 15025 3186 78 ENSG00000201988.2 Y_RNA chr6 30736304 30736414 - misc_RNA NOVEL NA 111 111 1 ENSG00000275678.1 RP4-547N15.3 chr1 67121605 67123956 - sense_intronic NOVEL OTTHUMG00000188161.1 2352 2352 1 ENSG00000272273.1 XXbac-BPG252P9.10 chr6 30742929 30743592 + antisense NOVEL OTTHUMG00000185725.1 664 527 2 ENSG00000137331.11 IER3 chr6 30743199 30744554 - protein_coding KNOWN OTTHUMG00000031265.2 1356 1356 3 ENSG00000263608.2 RN7SL353P chr6 30751038 30751289 + misc_RNA KNOWN NA 252 252 1 ENSG00000228022.4 HCG20 chr6 30766825 30792250 + lincRNA KNOWN OTTHUMG00000031193.2 25426 1371 7 ENSG00000214894.5 LINC00243 chr6 30798654 30830659 - lincRNA KNOWN OTTHUMG00000031239.3 32006 2171 4 ENSG00000237923.1 XXbac-BPG27H4.8 chr6 30839526 30848159 - lincRNA NOVEL OTTHUMG00000133550.1 8634 799 3 ENSG00000202241.1 RN7SKP186 chr6 30864250 30864552 + misc_RNA KNOWN NA 303 303 1 ENSG00000237775.1 DDR1-AS1 chr6 30866982 30875918 - antisense KNOWN OTTHUMG00000031229.3 8937 3994 2 ENSG00000204580.10 DDR1 chr6 30876421 30900156 + protein_coding KNOWN OTTHUMG00000031236.12 23736 9122 428 ENSG00000264594.1 MIR4640 chr6 30890883 30890972 + miRNA KNOWN NA 90 90 1 ENSG00000272235.1 RP11-22L13.1 chr1 3306636 3310096 - lincRNA NOVEL OTTHUMG00000185641.1 3461 3461 1 ENSG00000162594.13 IL23R chr1 67166400 67259979 + protein_coding KNOWN OTTHUMG00000009092.4 93580 3012 24 ENSG00000213780.9 GTF2H4 chr6 30908184 30914106 + protein_coding KNOWN OTTHUMG00000031043.4 5923 2353 48 ENSG00000137411.15 VARS2 chr6 30908242 30926459 + protein_coding KNOWN OTTHUMG00000031263.3 18218 8448 231 ENSG00000196260.3 SFTA2 chr6 30931353 30932175 - protein_coding KNOWN OTTHUMG00000031183.2 823 691 5 ENSG00000252761.1 Y_RNA chr6 30932618 30932709 - misc_RNA NOVEL NA 92 92 1 ENSG00000168631.10 DPCR1 chr6 30940972 30954221 + protein_coding KNOWN OTTHUMG00000031104.3 13250 5314 7 ENSG00000233529.1 HCG21 chr6 30945979 30954862 - antisense KNOWN OTTHUMG00000031182.1 8884 605 3 ENSG00000275906.1 XXbac-BPG118E17.10 chr6 30961403 30962396 - processed_pseudogene KNOWN OTTHUMG00000187607.1 994 656 2 ENSG00000204544.5 MUC21 chr6 30983718 30989903 + protein_coding KNOWN OTTHUMG00000031216.5 6186 3793 6 ENSG00000261272.1 MUC22 chr6 31010474 31035402 + protein_coding KNOWN OTTHUMG00000133673.2 24929 6019 4 ENSG00000228789.5 HCG22 chr6 31053450 31059890 + lincRNA KNOWN OTTHUMG00000031179.7 6441 2211 17 ENSG00000253074.1 RNU6-586P chr1 67196140 67196243 + snRNA KNOWN NA 104 104 1 ENSG00000222895.1 RNU6-1133P chr6 31083010 31083109 + snRNA KNOWN NA 100 100 1 ENSG00000204542.2 C6orf15 chr6 31111223 31112559 - protein_coding KNOWN OTTHUMG00000031111.2 1337 1140 2 ENSG00000204540.9 PSORS1C1 chr6 31114750 31140092 + protein_coding KNOWN OTTHUMG00000031077.5 25343 5781 27 ENSG00000204539.3 CDSN chr6 31115090 31120446 - protein_coding KNOWN OTTHUMG00000031150.2 5357 2552 2 ENSG00000204538.3 PSORS1C2 chr6 31137536 31139350 - protein_coding KNOWN OTTHUMG00000031081.3 1815 1150 2 ENSG00000238211.1 POLR2LP chr6 31140727 31140913 + processed_pseudogene KNOWN OTTHUMG00000031249.2 187 187 1 ENSG00000204536.12 CCHCR1 chr6 31142439 31158238 - protein_coding KNOWN OTTHUMG00000031112.7 15800 5086 185 ENSG00000137310.10 TCF19 chr6 31158542 31167159 + protein_coding KNOWN OTTHUMG00000031274.3 8618 3538 14 ENSG00000204531.14 POU5F1 chr6 31164337 31180731 - protein_coding KNOWN OTTHUMG00000031206.9 16395 2881 40 ENSG00000204528.3 PSORS1C3 chr6 31173735 31177899 - sense_intronic KNOWN OTTHUMG00000031054.4 4165 593 3 ENSG00000221733.1 AL109843.1 chr1 67239440 67239527 - miRNA NOVEL NA 88 88 1 ENSG00000272501.1 XXbac-BPG299F13.17 chr6 31195200 31198037 - antisense NOVEL OTTHUMG00000185726.1 2838 2838 1 ENSG00000206344.6 HCG27 chr6 31197760 31203968 + protein_coding KNOWN OTTHUMG00000031248.4 6209 2354 8 ENSG00000271821.1 XXbac-BPG299F13.14 chr6 31200165 31201918 - lincRNA NOVEL OTTHUMG00000133706.1 1754 517 2 ENSG00000255726.1 XXbac-BPG299F13.15 chr6 31222913 31223093 + unprocessed_pseudogene KNOWN OTTHUMG00000168868.1 181 181 1 ENSG00000255899.1 XXbac-BPG299F13.16 chr6 31224342 31225058 - unprocessed_pseudogene KNOWN OTTHUMG00000168869.1 717 284 3 ENSG00000204525.13 HLA-C chr6 31268749 31357158 - protein_coding KNOWN OTTHUMG00000031154.7 88410 2850 52 ENSG00000214892.4 USP8P1 chr6 31275572 31278754 + processed_pseudogene KNOWN OTTHUMG00000031047.2 3183 3183 1 ENSG00000227939.1 RPL3P2 chr6 31280317 31281519 + processed_pseudogene KNOWN OTTHUMG00000031035.2 1203 1203 1 ENSG00000231402.1 WASF5P chr6 31287510 31288964 - processed_pseudogene KNOWN OTTHUMG00000031266.3 1455 1455 1 ENSG00000256166.1 XXbac-BPG248L24.13 chr6 31293908 31301642 - lincRNA NOVEL OTTHUMG00000168870.1 7735 536 4 ENSG00000252116.1 RNU4ATAC4P chr1 67267601 67267726 - snRNA KNOWN NA 126 126 1 ENSG00000229836.1 XXbac-BPG248L24.10 chr6 31307815 31308549 - unprocessed_pseudogene KNOWN OTTHUMG00000133741.1 735 306 2 ENSG00000234745.8 HLA-B chr6 31353872 31357188 - protein_coding KNOWN OTTHUMG00000031153.5 3317 3012 23 ENSG00000277402.1 MIR6891 chr6 31355224 31355316 - miRNA KNOWN NA 93 93 1 ENSG00000271581.1 XXbac-BPG248L24.12 chr6 31356647 31357637 + unprocessed_pseudogene KNOWN OTTHUMG00000184567.1 991 991 1 ENSG00000228432.1 DHFRP2 chr6 31366352 31366898 - processed_pseudogene KNOWN OTTHUMG00000031113.2 547 547 1 ENSG00000201658.1 RNU6-283P chr6 31370134 31370240 + snRNA KNOWN NA 107 107 1 ENSG00000265294.1 AL671883.1 chr6 31374318 31374403 - miRNA NOVEL NA 86 86 1 ENSG00000230994.1 FGFR3P1 chr6 31377419 31378019 + processed_pseudogene KNOWN OTTHUMG00000031234.2 601 601 1 ENSG00000223702.1 ZDHHC20P2 chr6 31380411 31380839 + processed_pseudogene KNOWN OTTHUMG00000133740.1 429 429 1 ENSG00000225851.1 HLA-S chr6 31382074 31382288 - unprocessed_pseudogene KNOWN OTTHUMG00000031178.2 215 53 2 ENSG00000228523.1 RP11-131O15.2 chr1 67278052 67278779 + processed_pseudogene KNOWN OTTHUMG00000009093.2 728 728 1 ENSG00000272221.1 XXbac-BPG181B23.7 chr6 31394289 31395495 - lincRNA NOVEL OTTHUMG00000185727.1 1207 1207 1 ENSG00000204520.11 MICA chr6 31399784 31415315 + protein_coding KNOWN OTTHUMG00000031073.8 15532 2386 17 ENSG00000206337.9 HCP5 chr6 31400702 31477506 + sense_overlapping KNOWN OTTHUMG00000031282.4 76805 3138 10 ENSG00000199332.1 Y_RNA chr6 31402152 31402250 - misc_RNA NOVEL NA 99 99 1 ENSG00000230174.1 LINC01149 chr6 31441667 31446973 + lincRNA NOVEL OTTHUMG00000133747.1 5307 2141 2 ENSG00000233902.1 XXbac-BPG181B23.6 chr6 31462728 31463336 - unprocessed_pseudogene KNOWN OTTHUMG00000152935.1 609 609 1 ENSG00000204516.8 MICB chr6 31494881 31511124 + protein_coding KNOWN OTTHUMG00000031074.3 16244 2798 21 ENSG00000201680.1 Y_RNA chr6 31496689 31496790 - misc_RNA NOVEL NA 102 102 1 ENSG00000256851.1 XXbac-BPG16N22.5 chr6 31515979 31516211 + unprocessed_pseudogene KNOWN OTTHUMG00000168974.1 233 233 1 ENSG00000219797.2 PPIAP9 chr6 31519480 31520291 - processed_pseudogene KNOWN OTTHUMG00000031290.4 812 498 2 ENSG00000081985.9 IL12RB2 chr1 67307364 67396900 + protein_coding KNOWN OTTHUMG00000009094.2 89537 4145 53 ENSG00000225499.1 RPL15P4 chr6 31528114 31528693 + processed_pseudogene KNOWN OTTHUMG00000031122.2 580 580 1 ENSG00000204511.2 MCCD1 chr6 31528717 31530232 + protein_coding KNOWN OTTHUMG00000134292.1 1516 955 2 ENSG00000254870.4 ATP6V1G2-DDX39B chr6 31530219 31546608 - protein_coding KNOWN OTTHUMG00000031200.4 16390 2372 21 ENSG00000198563.12 DDX39B chr6 31530219 31542448 - protein_coding KNOWN OTTHUMG00000031165.8 12230 7007 127 ENSG00000276877.1 AL662801.1 chr6 31532757 31532869 - miRNA NOVEL NA 113 113 1 ENSG00000201785.1 SNORD117 chr6 31536374 31536449 - snoRNA KNOWN NA 76 76 1 ENSG00000265236.1 SNORD84 chr6 31541101 31541178 - snoRNA KNOWN NA 78 78 1 ENSG00000234006.1 DDX39B-AS1 chr6 31542304 31543138 + antisense NOVEL OTTHUMG00000134293.1 835 527 4 ENSG00000213760.9 ATP6V1G2 chr6 31544462 31548427 - protein_coding KNOWN OTTHUMG00000166618.1 3966 2147 17 ENSG00000204498.9 NFKBIL1 chr6 31546870 31558829 + protein_coding KNOWN OTTHUMG00000031038.4 11960 1779 19 ENSG00000281152.1 IL12RB2 chr1 67320369 67395580 + protein_coding KNOWN NA 75212 1980 14 ENSG00000226979.7 LTA chr6 31572054 31574324 + protein_coding KNOWN OTTHUMG00000031135.2 2271 1737 14 ENSG00000232810.3 TNF chr6 31575567 31578336 + protein_coding KNOWN OTTHUMG00000031194.2 2770 1676 4 ENSG00000227507.2 LTB chr6 31580525 31582522 - protein_coding KNOWN OTTHUMG00000031136.4 1998 1535 12 ENSG00000204482.9 LST1 chr6 31586124 31588909 + protein_coding KNOWN OTTHUMG00000031264.6 2786 2281 69 ENSG00000204475.8 NCR3 chr6 31588895 31592985 - protein_coding KNOWN OTTHUMG00000031123.3 4091 1212 25 ENSG00000230622.1 UQCRHP1 chr6 31611083 31611356 - processed_pseudogene KNOWN OTTHUMG00000031291.3 274 274 1 ENSG00000204472.11 AIF1 chr6 31615184 31617021 + protein_coding KNOWN OTTHUMG00000031246.4 1838 1276 22 ENSG00000204469.11 PRRC2A chr6 31620720 31637771 + protein_coding KNOWN OTTHUMG00000031168.2 17052 9115 100 ENSG00000200816.1 SNORA38 chr6 31623079 31623210 + snoRNA KNOWN NA 132 132 1 ENSG00000274494.1 MIR6832 chr6 31633787 31633858 + miRNA KNOWN NA 72 72 1 ENSG00000142864.13 SERBP1 chr1 67407810 67430415 - protein_coding KNOWN OTTHUMG00000009372.3 22606 7676 47 ENSG00000204463.11 BAG6 chr6 31639028 31652705 - protein_coding KNOWN OTTHUMG00000031171.10 13678 5310 262 ENSG00000204444.9 APOM chr6 31652416 31658210 + protein_coding KNOWN OTTHUMG00000031250.4 5795 1660 17 ENSG00000204439.3 C6orf47 chr6 31658298 31660772 - protein_coding KNOWN OTTHUMG00000031172.1 2475 2475 1 ENSG00000227198.1 C6orf47-AS1 chr6 31658329 31660721 + antisense NOVEL OTTHUMG00000057503.2 2393 673 2 ENSG00000204438.9 GPANK1 chr6 31661229 31666283 - protein_coding KNOWN OTTHUMG00000031174.8 5055 3528 28 ENSG00000201207.1 Y_RNA chr6 31663288 31663401 + misc_RNA NOVEL NA 114 114 1 ENSG00000204435.12 CSNK2B chr6 31665236 31670343 + protein_coding KNOWN OTTHUMG00000177888.1 5108 2933 43 ENSG00000263020.4 CSNK2B-LY6G5B-562 chr6 31665880 31673546 + protein_coding PUTATIVE OTTHUMG00000031056.15 7667 2746 31 ENSG00000240053.8 LY6G5B chr6 31670167 31673776 + protein_coding KNOWN OTTHUMG00000031227.9 3610 3031 7 ENSG00000204428.11 LY6G5C chr6 31676684 31684040 - protein_coding KNOWN OTTHUMG00000031228.9 7357 2621 21 ENSG00000223263.1 RNU6-387P chr1 67417214 67417318 + snRNA KNOWN NA 105 105 1 ENSG00000204427.10 ABHD16A chr6 31686949 31703444 - protein_coding KNOWN OTTHUMG00000031177.7 16496 4153 150 ENSG00000204422.7 XXbac-BPG32J3.20 chr6 31686962 31714072 - protein_coding KNOWN OTTHUMG00000031253.7 27111 2332 22 ENSG00000266776.1 MIR4646 chr6 31701029 31701091 - miRNA KNOWN NA 63 63 1 ENSG00000204424.9 LY6G6F chr6 31706885 31710595 + protein_coding KNOWN OTTHUMG00000031252.5 3711 920 6 ENSG00000250641.1 XXbac-BPG32J3.19 chr6 31706904 31717918 + protein_coding PUTATIVE OTTHUMG00000162247.1 11015 1266 6 ENSG00000255552.6 LY6G6E chr6 31711771 31714065 - protein_coding KNOWN OTTHUMG00000166419.1 2295 1104 11 ENSG00000244355.6 LY6G6D chr6 31715356 31717804 + protein_coding KNOWN OTTHUMG00000137370.4 2449 614 8 ENSG00000204420.7 C6orf25 chr6 31718594 31726714 + protein_coding KNOWN OTTHUMG00000031130.6 8121 2937 56 ENSG00000204421.2 LY6G6C chr6 31718648 31721845 - protein_coding KNOWN OTTHUMG00000031251.3 3198 1103 7 ENSG00000213722.7 DDAH2 chr6 31727038 31730617 - protein_coding KNOWN OTTHUMG00000031212.5 3580 2538 56 ENSG00000235200.1 RP4-763G1.2 chr1 67529630 67532329 + lincRNA NOVEL OTTHUMG00000009373.1 2700 408 3 ENSG00000213719.7 CLIC1 chr6 31730581 31739763 - protein_coding KNOWN OTTHUMG00000031103.3 9183 1942 35 ENSG00000204410.13 MSH5 chr6 31739948 31762834 + protein_coding KNOWN OTTHUMG00000167551.1 22887 6234 233 ENSG00000255152.7 MSH5-SAPCD1 chr6 31740020 31764851 + protein_coding KNOWN OTTHUMG00000031139.11 24832 4140 58 ENSG00000252743.1 RNU6-850P chr6 31756951 31757053 - snRNA KNOWN NA 103 103 1 ENSG00000228727.7 SAPCD1 chr6 31762799 31764851 + protein_coding KNOWN OTTHUMG00000031131.4 2053 1557 10 ENSG00000235663.1 SAPCD1-AS1 chr6 31764310 31765588 - antisense NOVEL OTTHUMG00000137389.1 1279 461 2 ENSG00000204396.9 VWA7 chr6 31765590 31777294 - protein_coding KNOWN OTTHUMG00000031132.2 11705 3638 41 ENSG00000204394.11 VARS chr6 31777518 31795953 - protein_coding KNOWN OTTHUMG00000031286.3 18436 6081 90 ENSG00000201555.1 Y_RNA chr6 31778817 31778905 - misc_RNA NOVEL NA 89 89 1 ENSG00000204392.9 LSM2 chr6 31797396 31806984 - protein_coding KNOWN OTTHUMG00000031121.2 9589 1077 29 ENSG00000130762.13 ARHGEF16 chr1 3454426 3481113 + protein_coding KNOWN OTTHUMG00000000625.3 26688 5563 60 ENSG00000207504.1 RNU6-1031P chr1 67541127 67541233 + snRNA KNOWN NA 107 107 1 ENSG00000204390.9 HSPA1L chr6 31809619 31815065 - protein_coding KNOWN OTTHUMG00000031208.2 5447 2544 2 ENSG00000204389.9 HSPA1A chr6 31815464 31817946 + protein_coding KNOWN OTTHUMG00000031201.3 2483 2483 3 ENSG00000204388.6 HSPA1B chr6 31827735 31830255 + protein_coding KNOWN OTTHUMG00000031202.2 2521 2521 1 ENSG00000204387.11 C6orf48 chr6 31834608 31839766 + protein_coding KNOWN OTTHUMG00000031175.3 5159 1801 39 ENSG00000201823.1 SNORD48 chr6 31835263 31835326 + snoRNA KNOWN NA 64 64 1 ENSG00000201754.1 SNORD52 chr6 31837076 31837142 + snoRNA KNOWN NA 67 67 1 ENSG00000204386.9 NEU1 chr6 31857659 31862906 - protein_coding KNOWN OTTHUMG00000031284.3 5248 4822 19 ENSG00000204385.9 SLC44A4 chr6 31863192 31879046 - protein_coding KNOWN OTTHUMG00000031133.12 15855 3369 96 ENSG00000204371.10 EHMT2 chr6 31879759 31897687 - protein_coding KNOWN OTTHUMG00000031180.5 17929 7289 180 ENSG00000237080.2 EHMT2-AS1 chr6 31883761 31884204 + antisense NOVEL OTTHUMG00000057535.2 444 373 2 ENSG00000238139.2 RP11-393N21.1 chr1 67561073 67561446 + processed_pseudogene KNOWN OTTHUMG00000009371.3 374 374 1 ENSG00000166278.13 C2 chr6 31897785 31945672 + protein_coding KNOWN OTTHUMG00000031190.13 47888 5536 165 ENSG00000204366.3 ZBTB12 chr6 31899607 31901992 - protein_coding KNOWN OTTHUMG00000031169.2 2386 1875 2 ENSG00000244255.4 XXbac-BPG116M5.17 chr6 31927698 31952048 + protein_coding NOVEL OTTHUMG00000159600.1 24351 4069 58 ENSG00000281756.1 C2-AS1 chr6 31934474 31941724 - antisense KNOWN OTTHUMG00000189556.1 7251 762 3 ENSG00000243649.7 CFB chr6 31945650 31952084 + protein_coding KNOWN OTTHUMG00000031198.3 6435 4997 81 ENSG00000204356.10 NELFE chr6 31952087 31959110 - protein_coding KNOWN OTTHUMG00000031046.4 7024 2719 113 ENSG00000221267.1 MIR1236 chr6 31956839 31956940 - miRNA KNOWN NA 102 102 1 ENSG00000204351.10 SKIV2L chr6 31959080 31969755 + protein_coding KNOWN OTTHUMG00000031146.4 10676 5565 143 ENSG00000204348.8 DXO chr6 31969810 31972292 - protein_coding KNOWN OTTHUMG00000031272.3 2483 2483 72 ENSG00000204344.13 STK19 chr6 31971091 31982821 + protein_coding KNOWN OTTHUMG00000166424.1 11731 3954 89 ENSG00000242482.3 RN7SL392P chr1 67656831 67657129 - misc_RNA KNOWN NA 299 299 1 ENSG00000244731.6 C4A chr6 31982024 32002681 + protein_coding KNOWN OTTHUMG00000031186.5 20658 7191 145 ENSG00000233627.2 C4A-AS1 chr6 31999976 32003521 - antisense NOVEL OTTHUMG00000137496.2 3546 2095 2 ENSG00000204338.7 CYP21A1P chr6 32005636 32008451 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000031026.3 2816 1971 18 ENSG00000279546.1 AL645922.1 chr6 32006168 32007104 - protein_coding KNOWN NA 937 69 2 ENSG00000248290.1 TNXA chr6 32008614 32012472 - unprocessed_pseudogene KNOWN OTTHUMG00000031024.2 3859 2038 13 ENSG00000250535.1 STK19B chr6 32013270 32013787 + unprocessed_pseudogene KNOWN OTTHUMG00000031025.2 518 211 3 ENSG00000224389.7 C4B chr6 32014762 32035418 + protein_coding KNOWN OTTHUMG00000031187.5 20657 7116 142 ENSG00000229776.1 C4B-AS1 chr6 32032713 32036258 - antisense NOVEL OTTHUMG00000137467.3 3546 2095 2 ENSG00000231852.5 CYP21A2 chr6 32038265 32041670 + protein_coding KNOWN OTTHUMG00000031069.3 3406 2909 91 ENSG00000168477.16 TNXB chr6 32041154 32115334 - protein_coding KNOWN OTTHUMG00000031088.7 74181 15623 129 ENSG00000232048.2 HNRNPCP9 chr1 67660155 67661013 - processed_pseudogene KNOWN OTTHUMG00000009543.3 859 859 1 ENSG00000252512.1 RNA5SP206 chr6 32078508 32078628 - rRNA KNOWN NA 121 121 1 ENSG00000213676.9 ATF6B chr6 32098176 32128253 - protein_coding KNOWN OTTHUMG00000031296.3 30078 3660 71 ENSG00000204315.3 FKBPL chr6 32128707 32130291 - protein_coding KNOWN OTTHUMG00000031129.2 1585 1345 2 ENSG00000204314.9 PRRT1 chr6 32148359 32154373 - protein_coding KNOWN OTTHUMG00000031144.2 6015 4261 40 ENSG00000221988.11 PPT2 chr6 32153441 32163680 + protein_coding KNOWN OTTHUMG00000031257.17 10240 2940 80 ENSG00000258388.6 PPT2-EGFL8 chr6 32153845 32171978 + protein_coding KNOWN OTTHUMG00000171245.3 18134 5512 77 ENSG00000241404.5 EGFL8 chr6 32164583 32168281 + protein_coding KNOWN OTTHUMG00000031222.14 3699 2621 38 ENSG00000204310.9 AGPAT1 chr6 32168212 32178096 - protein_coding KNOWN OTTHUMG00000031210.2 9885 3631 52 ENSG00000278512.1 MIR6721 chr6 32170030 32170116 - miRNA KNOWN NA 87 87 1 ENSG00000204308.7 RNF5 chr6 32178354 32180793 + protein_coding KNOWN OTTHUMG00000031093.2 2440 1178 9 ENSG00000116717.10 GADD45A chr1 67685061 67688338 + protein_coding KNOWN OTTHUMG00000009374.2 3278 2069 14 ENSG00000277264.1 MIR6833 chr6 32179816 32179876 + miRNA KNOWN NA 61 61 1 ENSG00000204305.12 AGER chr6 32180968 32184324 - protein_coding KNOWN OTTHUMG00000031120.2 3357 2077 112 ENSG00000273333.2 XXbac-BPG300A18.13 chr6 32184733 32185882 - 3prime_overlapping_ncrna NOVEL OTTHUMG00000185990.2 1150 662 2 ENSG00000204304.10 PBX2 chr6 32184741 32190186 - protein_coding KNOWN OTTHUMG00000031116.5 5446 4344 23 ENSG00000213654.8 GPSM3 chr6 32190766 32195523 - protein_coding KNOWN OTTHUMG00000031244.3 4758 1854 25 ENSG00000204301.6 NOTCH4 chr6 32194843 32224067 - protein_coding KNOWN OTTHUMG00000031044.2 29225 9748 58 ENSG00000277427.1 XXbac-BPG154L12.5 chr6 32255284 32350039 + antisense NOVEL OTTHUMG00000188162.1 94756 659 2 ENSG00000225914.1 XXbac-BPG154L12.4 chr6 32255711 32265838 + antisense NOVEL OTTHUMG00000150222.1 10128 3458 2 ENSG00000204296.10 C6orf10 chr6 32288526 32371912 - protein_coding KNOWN OTTHUMG00000031107.4 83387 2474 229 ENSG00000237285.1 HNRNPA1P2 chr6 32325219 32326178 + processed_pseudogene KNOWN OTTHUMG00000031294.3 960 960 1 ENSG00000172380.5 GNG12 chr1 67701466 67833467 - protein_coding KNOWN OTTHUMG00000009545.2 132002 4724 6 ENSG00000223335.1 RNU6-603P chr6 32352877 32352983 + snRNA KNOWN NA 107 107 1 ENSG00000228962.1 HCG23 chr6 32390510 32393686 + antisense KNOWN OTTHUMG00000031217.2 3177 610 3 ENSG00000204290.9 BTNL2 chr6 32393963 32407128 - protein_coding KNOWN OTTHUMG00000031102.4 13166 1468 25 ENSG00000204287.12 HLA-DRA chr6 32439842 32445046 + protein_coding KNOWN OTTHUMG00000031269.3 5205 1280 10 ENSG00000196301.3 HLA-DRB9 chr6 32459821 32473500 - unprocessed_pseudogene KNOWN OTTHUMG00000031197.4 13680 343 2 ENSG00000198502.5 HLA-DRB5 chr6 32517343 32530287 - protein_coding KNOWN OTTHUMG00000031027.3 12945 1260 6 ENSG00000251916.1 RNU1-61P chr6 32549940 32550090 - snRNA KNOWN NA 151 151 1 ENSG00000229391.6 HLA-DRB6 chr6 32552713 32560022 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000031028.4 7310 1326 17 ENSG00000196126.9 HLA-DRB1 chr6 32552990 32589848 - protein_coding KNOWN OTTHUMG00000031196.4 36859 1304 12 ENSG00000196735.10 HLA-DQA1 chr6 32628179 32647062 + protein_coding KNOWN OTTHUMG00000031106.5 18884 6927 31 ENSG00000238778.1 RNU7-80P chr1 67772593 67772653 - snRNA KNOWN NA 61 61 1 ENSG00000179344.15 HLA-DQB1 chr6 32659467 32668383 - protein_coding KNOWN OTTHUMG00000031124.4 8917 4904 36 ENSG00000223534.1 HLA-DQB1-AS1 chr6 32659880 32660729 + antisense NOVEL OTTHUMG00000140101.2 850 552 2 ENSG00000235040.1 MTCO3P1 chr6 32706124 32706955 - unprocessed_pseudogene KNOWN OTTHUMG00000031271.3 832 832 1 ENSG00000232080.5 XXbac-BPG254F23.7 chr6 32718005 32719170 + processed_transcript NOVEL OTTHUMG00000140119.4 1166 1017 9 ENSG00000226030.1 HLA-DQB3 chr6 32730758 32731695 - unprocessed_pseudogene KNOWN OTTHUMG00000031127.2 938 356 2 ENSG00000237541.3 HLA-DQA2 chr6 32741342 32747215 + protein_coding KNOWN OTTHUMG00000031108.2 5874 1524 5 ENSG00000263649.1 MIR3135B chr6 32749912 32749979 - miRNA KNOWN NA 68 68 1 ENSG00000232629.7 HLA-DQB2 chr6 32756098 32763534 - protein_coding KNOWN OTTHUMG00000031125.3 7437 2028 20 ENSG00000241106.5 HLA-DOB chr6 32812763 32817048 - protein_coding KNOWN OTTHUMG00000031213.3 4286 1858 20 ENSG00000250264.1 XXbac-BPG246D15.9 chr6 32813767 32838822 - protein_coding NOVEL OTTHUMG00000160697.1 25056 2705 15 ENSG00000232284.6 GNG12-AS1 chr1 67832303 68202987 + antisense NOVEL OTTHUMG00000009150.1 370685 3465 25 ENSG00000204267.12 TAP2 chr6 32821833 32838780 - protein_coding KNOWN OTTHUMG00000031068.2 16948 6390 43 ENSG00000204264.7 PSMB8 chr6 32840717 32844703 - protein_coding KNOWN OTTHUMG00000031285.3 3987 2006 25 ENSG00000204261.7 PSMB8-AS1 chr6 32844086 32846495 + lincRNA NOVEL OTTHUMG00000140123.1 2410 1951 15 ENSG00000240065.6 PSMB9 chr6 32844136 32859585 + protein_coding KNOWN OTTHUMG00000031287.5 15450 3072 24 ENSG00000168394.10 TAP1 chr6 32845209 32853978 - protein_coding KNOWN OTTHUMG00000031067.2 8770 4578 19 ENSG00000234515.1 PPP1R2P1 chr6 32879171 32879848 - transcribed_processed_pseudogene KNOWN OTTHUMG00000031273.2 678 678 2 ENSG00000235301.1 HLA-Z chr6 32896416 32896490 + unprocessed_pseudogene KNOWN OTTHUMG00000031189.2 75 75 1 ENSG00000242574.7 HLA-DMB chr6 32934629 32941070 - protein_coding KNOWN OTTHUMG00000031176.3 6442 4655 20 ENSG00000212066.1 AL645941.1 chr6 32936916 32937010 - miRNA NOVEL NA 95 95 1 ENSG00000248993.1 XXbac-BPG181M17.5 chr6 32937364 32953122 - protein_coding PUTATIVE OTTHUMG00000162160.1 15759 612 4 ENSG00000235055.3 RP4-609E1.2 chr1 68043330 68044233 + processed_pseudogene KNOWN OTTHUMG00000039725.2 904 904 1 ENSG00000204257.13 HLA-DMA chr6 32948613 32969094 - protein_coding KNOWN OTTHUMG00000031173.7 20482 2534 34 ENSG00000204256.11 BRD2 chr6 32968660 32981505 + protein_coding KNOWN OTTHUMG00000031241.6 12846 7337 128 ENSG00000223837.2 BRD2-IT1 chr6 32970232 32970886 + sense_intronic NOVEL OTTHUMG00000140321.2 655 338 2 ENSG00000263756.1 XXbac-BPG181M17.6 chr6 32972065 32972853 - antisense NOVEL OTTHUMG00000178528.1 789 577 2 ENSG00000204252.11 HLA-DOA chr6 33004178 33009612 - protein_coding KNOWN OTTHUMG00000031211.2 5435 4012 24 ENSG00000231389.6 HLA-DPA1 chr6 33064569 33080775 - protein_coding KNOWN OTTHUMG00000031058.5 16207 5748 22 ENSG00000223865.9 HLA-DPB1 chr6 33075926 33087201 + protein_coding KNOWN OTTHUMG00000031076.6 11276 2791 28 ENSG00000224796.1 RPL32P1 chr6 33079451 33079860 + processed_pseudogene KNOWN OTTHUMG00000031191.2 410 410 1 ENSG00000231461.1 HLA-DPA2 chr6 33091753 33097295 - unprocessed_pseudogene KNOWN OTTHUMG00000031061.2 5543 733 4 ENSG00000228688.1 COL11A2P1 chr6 33103794 33107330 - unprocessed_pseudogene KNOWN OTTHUMG00000031065.2 3537 676 6 ENSG00000162595.4 DIRAS3 chr1 68045962 68051631 - protein_coding KNOWN OTTHUMG00000009544.2 5670 1973 6 ENSG00000224557.6 HLA-DPB2 chr6 33112451 33129084 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000031080.2 16634 1600 8 ENSG00000237398.1 HLA-DPA3 chr6 33131216 33143325 - unprocessed_pseudogene KNOWN OTTHUMG00000031063.2 12110 229 2 ENSG00000230313.1 HCG24 chr6 33144783 33147767 + antisense KNOWN OTTHUMG00000031166.2 2985 717 2 ENSG00000204248.9 COL11A2 chr6 33162681 33192499 - protein_coding KNOWN OTTHUMG00000031036.10 29819 6740 228 ENSG00000204231.9 RXRB chr6 33193588 33200688 - protein_coding KNOWN OTTHUMG00000031298.4 7101 3920 34 ENSG00000202441.2 RNY4P10 chr6 33199601 33199696 + misc_RNA KNOWN NA 96 96 1 ENSG00000112473.15 SLC39A7 chr6 33200445 33204439 + protein_coding KNOWN OTTHUMG00000031238.4 3995 2845 32 ENSG00000204228.3 HSD17B8 chr6 33204642 33206831 + protein_coding KNOWN OTTHUMG00000031117.2 2190 1171 16 ENSG00000199036.1 MIR219A1 chr6 33207835 33207944 + miRNA KNOWN NA 110 110 1 ENSG00000204227.4 RING1 chr6 33208495 33212722 + protein_coding KNOWN OTTHUMG00000031278.2 4228 1818 12 ENSG00000272088.1 RP11-168F9.2 chr1 3487246 3487627 + lincRNA NOVEL OTTHUMG00000185642.1 382 382 1 ENSG00000228431.1 ARL5AP3 chr1 68049360 68049745 - processed_pseudogene KNOWN OTTHUMG00000057527.1 386 386 1 ENSG00000225463.1 ZNF70P1 chr6 33215705 33216328 + processed_pseudogene KNOWN OTTHUMG00000031147.2 624 624 1 ENSG00000223457.1 HTATSF1P chr6 33237799 33239690 + processed_pseudogene KNOWN OTTHUMG00000031101.2 1892 984 3 ENSG00000272217.1 XXbac-BPG157A10.21 chr6 33246075 33246856 - lincRNA NOVEL OTTHUMG00000185732.1 782 594 2 ENSG00000232940.4 HCG25 chr6 33249534 33254989 + antisense KNOWN OTTHUMG00000031170.3 5456 1374 16 ENSG00000223501.7 VPS52 chr6 33250272 33272047 - protein_coding KNOWN OTTHUMG00000031276.8 21776 4503 99 ENSG00000231500.5 RPS18 chr6 33272010 33276510 + protein_coding KNOWN OTTHUMG00000031053.3 4501 1898 39 ENSG00000235863.3 B3GALT4 chr6 33277132 33284832 + protein_coding KNOWN OTTHUMG00000031100.3 7701 2356 3 ENSG00000227057.6 WDR46 chr6 33279108 33289527 - protein_coding KNOWN OTTHUMG00000031192.3 10420 3115 60 ENSG00000274694.1 MIR6873 chr6 33287227 33287289 - miRNA KNOWN NA 63 63 1 ENSG00000204220.8 PFDN6 chr6 33289302 33298401 + protein_coding KNOWN OTTHUMG00000031247.4 9100 2953 29 ENSG00000263542.1 AL157407.1 chr1 68058177 68058262 + miRNA NOVEL NA 86 86 1 ENSG00000275010.1 MIR6834 chr6 33290245 33290325 + miRNA KNOWN NA 81 81 1 ENSG00000237441.8 RGL2 chr6 33291654 33299324 - protein_coding KNOWN OTTHUMG00000031072.3 7671 4541 104 ENSG00000231925.10 TAPBP chr6 33299694 33314387 - protein_coding KNOWN OTTHUMG00000031090.4 14694 5056 49 ENSG00000236104.2 ZBTB22 chr6 33314406 33317942 - protein_coding KNOWN OTTHUMG00000031110.2 3537 2728 6 ENSG00000204209.9 DAXX chr6 33318558 33329269 - protein_coding KNOWN OTTHUMG00000031203.3 10712 3664 58 ENSG00000229596.3 MYL8P chr6 33338978 33339495 + processed_pseudogene KNOWN OTTHUMG00000031181.2 518 518 1 ENSG00000228285.2 LYPLA2P1 chr6 33365548 33366243 - processed_pseudogene KNOWN OTTHUMG00000031128.2 696 696 1 ENSG00000225644.1 RPL35AP4 chr6 33389374 33389475 - processed_pseudogene KNOWN OTTHUMG00000140156.1 102 102 1 ENSG00000237649.6 KIFC1 chr6 33391536 33409924 + protein_coding KNOWN OTTHUMG00000031209.3 18389 3345 25 ENSG00000204194.1 RPL12P1 chr6 33400059 33400556 - processed_pseudogene KNOWN OTTHUMG00000031256.3 498 498 1 ENSG00000116729.12 WLS chr1 68098473 68233120 - protein_coding KNOWN OTTHUMG00000009153.3 134648 4469 85 ENSG00000112511.16 PHF1 chr6 33410399 33416453 + protein_coding KNOWN OTTHUMG00000031105.10 6055 3596 90 ENSG00000112514.14 CUTA chr6 33416442 33418317 - protein_coding KNOWN OTTHUMG00000031254.6 1876 1876 75 ENSG00000197283.11 SYNGAP1 chr6 33420070 33457541 + protein_coding KNOWN OTTHUMG00000031096.12 37472 11004 127 ENSG00000274259.2 XXbac-BPG294E21.9 chr6 33437363 33454453 - antisense NOVEL OTTHUMG00000188147.2 17091 779 4 ENSG00000264085.1 MIR5004 chr6 33438331 33438437 + miRNA KNOWN NA 107 107 1 ENSG00000213588.5 ZBTB9 chr6 33453970 33457548 + protein_coding KNOWN OTTHUMG00000140180.2 3579 3014 8 ENSG00000204188.6 GGNBP1 chr6 33540046 33589026 + unitary_pseudogene KNOWN OTTHUMG00000187092.3 48981 1737 32 ENSG00000242014.3 RN7SL26P chr6 33540694 33541000 + misc_RNA KNOWN NA 307 307 1 ENSG00000276746.1 Metazoa_SRP chr6 33562880 33563130 - misc_RNA NOVEL NA 251 251 1 ENSG00000030110.11 BAK1 chr6 33572547 33580293 - protein_coding KNOWN OTTHUMG00000014530.2 7747 2212 20 ENSG00000234383.1 CTBP2P8 chr1 68161761 68163090 - processed_pseudogene KNOWN OTTHUMG00000009154.1 1330 1330 1 ENSG00000197251.3 LINC00336 chr6 33586106 33593338 - lincRNA KNOWN OTTHUMG00000159733.1 7233 2107 2 ENSG00000281834.1 Metazoa_SRP chr6 33601007 33601255 - misc_RNA NOVEL NA 249 249 1 ENSG00000096433.9 ITPR3 chr6 33620365 33696574 + protein_coding KNOWN OTTHUMG00000014532.2 76210 9870 117 ENSG00000137288.8 UQCC2 chr6 33694293 33711727 - protein_coding KNOWN OTTHUMG00000014534.2 17435 4689 13 ENSG00000266509.1 MIR3934 chr6 33698128 33698234 + miRNA KNOWN NA 107 107 1 ENSG00000161896.9 IP6K3 chr6 33721667 33746985 - protein_coding KNOWN OTTHUMG00000014531.1 25319 2822 13 ENSG00000161904.10 LEMD2 chr6 33771202 33789136 - protein_coding KNOWN OTTHUMG00000014535.6 17935 6788 81 ENSG00000096395.9 MLN chr6 33794673 33804011 - protein_coding KNOWN OTTHUMG00000014536.4 9339 566 15 ENSG00000249346.5 LINC01016 chr6 33867506 33896914 - lincRNA NOVEL OTTHUMG00000166297.4 29409 3796 12 ENSG00000271362.1 RP3-468B3.4 chr6 33883170 33883411 + processed_pseudogene KNOWN OTTHUMG00000184544.1 242 242 1 ENSG00000221203.1 MIR1262 chr1 68183518 68183610 - miRNA KNOWN NA 93 93 1 ENSG00000233183.2 RP3-468B3.2 chr6 33893323 33927631 + lincRNA NOVEL OTTHUMG00000014537.3 34309 10366 8 ENSG00000276824.1 MIR7159 chr6 33899135 33899200 + miRNA KNOWN NA 66 66 1 ENSG00000221697.1 MIR1275 chr6 33999972 34000051 - miRNA KNOWN NA 80 80 1 ENSG00000124493.12 GRM4 chr6 34018645 34155622 - protein_coding KNOWN OTTHUMG00000014538.2 136978 16300 113 ENSG00000271231.1 KRT18P9 chr6 34189780 34191079 + processed_pseudogene KNOWN OTTHUMG00000184543.1 1300 1300 1 ENSG00000214810.4 CYCSP55 chr6 34219439 34220066 + processed_pseudogene KNOWN OTTHUMG00000014540.2 628 311 2 ENSG00000137309.18 HMGA1 chr6 34236873 34246231 + protein_coding KNOWN OTTHUMG00000014539.3 9359 2327 32 ENSG00000276404.1 MIR6835 chr6 34240673 34240736 + miRNA KNOWN NA 64 64 1 ENSG00000186577.10 C6orf1 chr6 34246380 34249470 - protein_coding KNOWN OTTHUMG00000159754.2 3091 2229 33 ENSG00000225339.3 RP11-513I15.6 chr6 34248568 34286768 + processed_transcript NOVEL OTTHUMG00000014542.4 38201 8287 10 ENSG00000229133.1 RPS7P4 chr1 68242474 68243055 - processed_pseudogene KNOWN OTTHUMG00000009206.1 582 582 1 ENSG00000220583.1 RPL35P2 chr6 34263311 34263673 - processed_pseudogene KNOWN OTTHUMG00000014541.1 363 363 1 ENSG00000272325.1 NUDT3 chr6 34279679 34392674 - protein_coding KNOWN OTTHUMG00000014545.2 112996 9905 5 ENSG00000270800.1 RPS10-NUDT3 chr6 34288770 34426048 - protein_coding PUTATIVE OTTHUMG00000185089.1 137279 876 9 ENSG00000124614.12 RPS10 chr6 34417454 34426125 - protein_coding KNOWN OTTHUMG00000014546.1 8672 1642 39 ENSG00000124507.9 PACSIN1 chr6 34466061 34535231 + protein_coding KNOWN OTTHUMG00000014547.4 69171 4807 51 ENSG00000221635.1 AL157372.1 chr6 34470790 34470929 - miRNA NOVEL NA 140 140 1 ENSG00000124664.9 SPDEF chr6 34537802 34556333 - protein_coding KNOWN OTTHUMG00000014548.1 18532 1914 11 ENSG00000196114.3 RP3-391O22.3 chr6 34576258 34576656 - processed_pseudogene KNOWN OTTHUMG00000014551.1 399 399 1 ENSG00000196821.8 C6orf106 chr6 34587288 34696859 - protein_coding KNOWN OTTHUMG00000014553.1 109572 4551 14 ENSG00000216636.1 RPL7P25 chr6 34616538 34617258 + processed_pseudogene KNOWN OTTHUMG00000014550.1 721 721 1 ENSG00000225242.2 COX6B1P7 chr1 68282388 68282622 + processed_pseudogene KNOWN OTTHUMG00000009209.2 235 235 1 ENSG00000265123.2 RN7SL200P chr6 34685355 34685642 - misc_RNA KNOWN NA 288 288 1 ENSG00000220643.1 RP3-391O22.1 chr6 34686602 34687106 + processed_pseudogene KNOWN OTTHUMG00000014549.2 505 280 2 ENSG00000272288.4 RP11-140K17.3 chr6 34696317 34697470 + antisense NOVEL OTTHUMG00000185742.1 1154 771 4 ENSG00000186328.4 RP11-140K17.2 chr6 34715613 34715940 + processed_pseudogene KNOWN OTTHUMG00000014552.1 328 328 1 ENSG00000217130.1 RP3-375P9.2 chr6 34744176 34744673 + processed_pseudogene KNOWN OTTHUMG00000014554.1 498 498 1 ENSG00000124562.8 SNRPC chr6 34757406 34773794 + protein_coding KNOWN OTTHUMG00000014555.2 16389 1277 22 ENSG00000065060.15 UHRF1BP1 chr6 34792015 34883138 + protein_coding KNOWN OTTHUMG00000014557.1 91124 9908 43 ENSG00000206717.1 Y_RNA chr6 34821445 34821542 + misc_RNA NOVEL NA 98 98 1 ENSG00000252106.2 RNY3P15 chr6 34873831 34873927 + misc_RNA KNOWN NA 97 97 1 ENSG00000064995.15 TAF11 chr6 34877778 34888089 - protein_coding KNOWN OTTHUMG00000014556.1 10312 1580 9 ENSG00000237622.1 TCEB1P18 chr1 68375327 68375663 - processed_pseudogene KNOWN OTTHUMG00000009210.1 337 337 1 ENSG00000064999.13 ANKS1A chr6 34889265 35091413 + protein_coding KNOWN OTTHUMG00000014559.2 202149 6777 30 ENSG00000187762.5 HSPE1P11 chr6 35023522 35023831 + processed_pseudogene KNOWN OTTHUMG00000014558.2 310 310 1 ENSG00000273870.1 RP11-174N3.4 chr6 35070871 35071049 - processed_pseudogene KNOWN OTTHUMG00000187612.1 179 179 1 ENSG00000124678.16 TCP11 chr6 35118071 35148610 - protein_coding KNOWN OTTHUMG00000014560.5 30540 3306 199 ENSG00000264241.1 AL138721.1 chr6 35133454 35133538 + miRNA NOVEL NA 85 85 1 ENSG00000266330.2 AL138721.2 chr6 35139088 35139192 + miRNA NOVEL NA 105 105 1 ENSG00000146197.8 SCUBE3 chr6 35214419 35253079 + protein_coding NOVEL OTTHUMG00000014562.1 38661 7356 22 ENSG00000272374.1 RP3-329A5.8 chr6 35220370 35224630 - lincRNA NOVEL OTTHUMG00000185743.1 4261 4261 1 ENSG00000065029.13 ZNF76 chr6 35258909 35295985 + protein_coding KNOWN OTTHUMG00000014564.3 37077 6789 77 ENSG00000217004.1 RP3-329A5.1 chr6 35279177 35279819 - unprocessed_pseudogene KNOWN OTTHUMG00000014561.1 643 328 2 ENSG00000229440.1 RP5-1033K19.2 chr1 68381441 68381657 - processed_pseudogene KNOWN OTTHUMG00000009211.1 217 217 1 ENSG00000023892.10 DEF6 chr6 35297852 35321771 + protein_coding KNOWN OTTHUMG00000014563.2 23920 2545 16 ENSG00000112033.12 PPARD chr6 35342558 35428191 + protein_coding KNOWN OTTHUMG00000014567.1 85634 4457 38 ENSG00000227154.3 MKRNP2 chr6 35443044 35449866 + unprocessed_pseudogene KNOWN OTTHUMG00000014568.1 6823 505 4 ENSG00000112039.3 FANCE chr6 35452361 35467103 + protein_coding KNOWN OTTHUMG00000014565.1 14743 2554 10 ENSG00000198755.9 RPL10A chr6 35468408 35470785 + protein_coding KNOWN OTTHUMG00000014566.1 2378 1501 27 ENSG00000276712.1 MIR7111 chr6 35470508 35470579 + miRNA KNOWN NA 72 72 1 ENSG00000007866.17 TEAD3 chr6 35473597 35497076 - protein_coding KNOWN OTTHUMG00000014571.3 23480 3046 32 ENSG00000112041.11 TULP1 chr6 35497874 35512938 - protein_coding KNOWN OTTHUMG00000014575.3 15065 2958 65 ENSG00000228559.1 RP3-340B19.3 chr6 35544632 35545669 + lincRNA NOVEL OTTHUMG00000014573.1 1038 595 3 ENSG00000219023.1 RP3-340B19.2 chr6 35555873 35556264 + processed_pseudogene KNOWN OTTHUMG00000014572.1 392 392 1 ENSG00000116745.6 RPE65 chr1 68428822 68449959 - protein_coding KNOWN OTTHUMG00000009208.1 21138 2610 14 ENSG00000096060.13 FKBP5 chr6 35573585 35728583 - protein_coding KNOWN OTTHUMG00000014576.2 154999 10628 41 ENSG00000218749.1 RP3-340B19.5 chr6 35607628 35607934 + processed_pseudogene KNOWN OTTHUMG00000014574.1 307 307 1 ENSG00000212579.1 SNORA40 chr6 35651818 35651945 + snoRNA NOVEL NA 128 128 1 ENSG00000265527.1 MIR5690 chr6 35664717 35664789 - miRNA KNOWN NA 73 73 1 ENSG00000223063.1 AL157823.1 chr6 35701003 35701138 - miRNA NOVEL NA 136 136 1 ENSG00000232909.1 RP3-510O8.4 chr6 35733867 35736947 - antisense NOVEL OTTHUMG00000014580.1 3081 669 4 ENSG00000157343.7 ARMC12 chr6 35737032 35749079 + protein_coding KNOWN OTTHUMG00000014577.3 12048 1418 21 ENSG00000220734.1 RP3-510O8.3 chr6 35765908 35766927 + processed_pseudogene KNOWN OTTHUMG00000014579.1 1020 628 2 ENSG00000196748.8 CLPSL2 chr6 35776594 35779552 + protein_coding KNOWN OTTHUMG00000014581.3 2959 611 12 ENSG00000204140.9 CLPSL1 chr6 35781017 35793675 + protein_coding KNOWN OTTHUMG00000014582.2 12659 790 5 ENSG00000162591.14 MEGF6 chr1 3489920 3611495 - protein_coding KNOWN OTTHUMG00000000611.6 121576 7039 122 ENSG00000024526.15 DEPDC1 chr1 68474152 68497221 - protein_coding KNOWN OTTHUMG00000009212.3 23070 5904 45 ENSG00000137392.8 CLPS chr6 35794982 35797344 - protein_coding KNOWN OTTHUMG00000014578.1 2363 601 8 ENSG00000197753.8 LHFPL5 chr6 35805293 35833874 + protein_coding KNOWN OTTHUMG00000014584.2 28582 2961 8 ENSG00000096063.13 SRPK1 chr6 35832966 35921342 - protein_coding KNOWN OTTHUMG00000014583.5 88377 6692 120 ENSG00000281304.1 Metazoa_SRP chr6 35911481 35911729 - misc_RNA NOVEL NA 249 249 1 ENSG00000112053.12 SLC26A8 chr6 35943514 36024868 - protein_coding KNOWN OTTHUMG00000014586.3 81355 6036 101 ENSG00000271304.1 DPRXP2 chr6 35989515 35990436 - processed_pseudogene KNOWN OTTHUMG00000185252.1 922 557 2 ENSG00000112062.9 MAPK14 chr6 36027677 36111236 + protein_coding KNOWN OTTHUMG00000159806.2 83560 6860 94 ENSG00000237719.1 RP1-179N16.3 chr6 36091991 36092646 - processed_pseudogene KNOWN OTTHUMG00000014585.1 656 656 1 ENSG00000156711.15 MAPK13 chr6 36127809 36144524 + protein_coding KNOWN OTTHUMG00000014587.1 16716 7197 41 ENSG00000246982.5 RP1-179N16.6 chr6 36146698 36197205 - antisense NOVEL OTTHUMG00000166301.1 50508 1463 8 ENSG00000233589.1 RP4-694A7.2 chr1 68479129 68483539 + antisense NOVEL OTTHUMG00000009204.1 4411 960 2 ENSG00000096070.18 BRPF3 chr6 36196744 36232790 + protein_coding KNOWN OTTHUMG00000014589.6 36047 6613 87 ENSG00000180316.10 PNPLA1 chr6 36243203 36308595 + protein_coding KNOWN OTTHUMG00000014590.5 65393 2567 32 ENSG00000189325.6 C6orf222 chr6 36315757 36336885 - protein_coding KNOWN OTTHUMG00000014591.2 21129 3736 12 ENSG00000010030.12 ETV7 chr6 36354091 36387800 - protein_coding KNOWN OTTHUMG00000014594.2 33710 2374 58 ENSG00000224666.3 RP1-50J22.4 chr6 36386831 36393462 + antisense NOVEL OTTHUMG00000014592.1 6632 361 5 ENSG00000179165.10 PXT1 chr6 36390551 36442889 - protein_coding KNOWN OTTHUMG00000159815.3 52339 2108 8 ENSG00000112078.12 KCTD20 chr6 36442767 36491143 + protein_coding KNOWN OTTHUMG00000014597.2 48377 6239 52 ENSG00000240733.3 RN7SL502P chr6 36450912 36451201 - misc_RNA KNOWN NA 290 290 1 ENSG00000112079.8 STK38 chr6 36493892 36547470 - protein_coding KNOWN OTTHUMG00000014598.1 53579 3576 14 ENSG00000264878.1 Z85986.1 chr6 36510517 36510598 - miRNA NOVEL NA 82 82 1 ENSG00000234264.1 DEPDC1-AS1 chr1 68496676 68538627 + antisense NOVEL OTTHUMG00000009207.2 41952 1247 3 ENSG00000239964.3 RN7SL748P chr6 36522191 36522501 + misc_RNA KNOWN NA 311 311 1 ENSG00000112081.15 SRSF3 chr6 36594353 36605600 + protein_coding KNOWN OTTHUMG00000014599.7 11248 7118 34 ENSG00000263894.1 MIR3925 chr6 36622436 36622512 - miRNA KNOWN NA 77 77 1 ENSG00000238554.1 RNU1-88P chr6 36639545 36639672 - snRNA KNOWN NA 128 128 1 ENSG00000251864.1 Y_RNA chr6 36672838 36672944 + misc_RNA NOVEL NA 107 107 1 ENSG00000281450.1 PANDAR chr6 36673621 36675126 - lincRNA KNOWN OTTHUMG00000189732.1 1506 1506 1 ENSG00000213500.3 LAP3P2 chr6 36673817 36675270 + processed_pseudogene KNOWN OTTHUMG00000014600.1 1454 1454 1 ENSG00000124762.12 CDKN1A chr6 36676460 36687339 + protein_coding KNOWN OTTHUMG00000014603.3 10880 3050 24 ENSG00000255587.6 RAB44 chr6 36697851 36733183 + protein_coding KNOWN OTTHUMG00000016308.4 35333 4247 25 ENSG00000220349.4 RP3-431A14.4 chr6 36737050 36737986 + processed_pseudogene KNOWN OTTHUMG00000014601.1 937 937 1 ENSG00000225167.1 TXNP2 chr1 68514375 68514669 - processed_pseudogene KNOWN OTTHUMG00000009205.1 295 295 1 ENSG00000124772.10 CPNE5 chr6 36740775 36840002 - protein_coding KNOWN OTTHUMG00000014602.1 99228 4067 47 ENSG00000137168.7 PPIL1 chr6 36854827 36875024 - protein_coding KNOWN OTTHUMG00000014612.1 20198 1810 7 ENSG00000198663.15 C6orf89 chr6 36871870 36928964 + protein_coding KNOWN OTTHUMG00000014613.3 57095 7340 36 ENSG00000232598.2 RP1-90K10.4 chr6 36940071 36944675 - lincRNA NOVEL OTTHUMG00000014610.2 4605 497 2 ENSG00000164530.12 PI16 chr6 36948263 36964837 + protein_coding KNOWN OTTHUMG00000014611.1 16575 2332 18 ENSG00000137409.17 MTCH1 chr6 36968141 36986298 - protein_coding KNOWN OTTHUMG00000014614.2 18158 3126 64 ENSG00000146192.13 FGD2 chr6 37005646 37029070 + protein_coding KNOWN OTTHUMG00000014616.2 23425 10167 88 ENSG00000226976.3 COX6A1P2 chr6 37044860 37045189 + processed_pseudogene KNOWN OTTHUMG00000014615.2 330 330 1 ENSG00000216412.4 RPL12P2 chr6 37091314 37091806 + processed_pseudogene KNOWN OTTHUMG00000014617.2 493 493 1 ENSG00000137193.12 PIM1 chr6 37170203 37175426 + protein_coding KNOWN OTTHUMG00000016426.1 5224 2977 12 ENSG00000223883.1 RP11-424D14.1 chr1 69055898 69185003 + lincRNA PUTATIVE OTTHUMG00000009216.1 129106 627 5 ENSG00000172738.10 TMEM217 chr6 37212180 37258155 - protein_coding KNOWN OTTHUMG00000014618.2 45976 2737 16 ENSG00000065491.8 TBC1D22B chr6 37257772 37332970 + protein_coding KNOWN OTTHUMG00000014619.1 75199 3462 13 ENSG00000275550.1 RP4-744I24.4 chr6 37295584 37295742 - processed_pseudogene KNOWN OTTHUMG00000187614.1 159 159 1 ENSG00000112130.15 RNF8 chr6 37353972 37394738 + protein_coding KNOWN OTTHUMG00000014620.3 40767 6575 42 ENSG00000239953.3 RN7SL273P chr6 37361185 37361483 + misc_RNA KNOWN NA 299 299 1 ENSG00000137200.11 CMTR1 chr6 37433219 37482827 + protein_coding KNOWN OTTHUMG00000014624.3 49609 5274 53 ENSG00000198937.8 CCDC167 chr6 37482920 37499922 - protein_coding KNOWN OTTHUMG00000014625.1 17003 619 4 ENSG00000204110.6 RP1-153P14.8 chr6 37507348 37535616 + lincRNA NOVEL OTTHUMG00000177812.2 28269 537 4 ENSG00000229559.2 RP1-153P14.3 chr6 37543553 37547280 - transcribed_processed_pseudogene KNOWN OTTHUMG00000014621.2 3728 943 5 ENSG00000227920.2 RP1-153P14.5 chr6 37545145 37550860 + lincRNA NOVEL OTTHUMG00000014623.2 5716 998 5 ENSG00000235446.1 RP11-74K19.1 chr1 69243372 69249423 - lincRNA PUTATIVE OTTHUMG00000009218.1 6052 434 2 ENSG00000263926.1 MIR4462 chr6 37555365 37555422 - miRNA KNOWN NA 58 58 1 ENSG00000279942.1 RP1-153P14.7 chr6 37567716 37571460 + TEC KNOWN OTTHUMG00000175913.1 3745 3745 1 ENSG00000112139.13 MDGA1 chr6 37630679 37699306 - protein_coding KNOWN OTTHUMG00000014626.4 68628 14187 63 ENSG00000225945.1 RP3-441A12.1 chr6 37815777 37819218 - antisense NOVEL OTTHUMG00000014627.1 3442 419 3 ENSG00000156639.10 ZFAND3 chr6 37819499 38154624 + protein_coding KNOWN OTTHUMG00000014629.5 335126 4036 29 ENSG00000243313.2 RN7SL285P chr6 37832922 37833185 - misc_RNA KNOWN NA 264 264 1 ENSG00000200597.1 RNU1-87P chr6 37915573 37915742 + snRNA KNOWN NA 170 170 1 ENSG00000218521.1 RP11-420A21.1 chr6 38002832 38003313 - processed_pseudogene KNOWN OTTHUMG00000014628.1 482 482 1 ENSG00000183826.15 BTBD9 chr6 38168451 38640148 - protein_coding KNOWN OTTHUMG00000014634.6 471698 9537 60 ENSG00000200706.1 SNORD45 chr6 38207274 38207345 + snoRNA NOVEL NA 72 72 1 ENSG00000229639.1 RP3-380B4.1 chr1 69433255 69435409 + lincRNA PUTATIVE OTTHUMG00000009217.1 2155 458 2 ENSG00000238716.1 AL031905.1 chr6 38359148 38359229 - miRNA NOVEL NA 82 82 1 ENSG00000226533.1 BTBD9-AS1 chr6 38481692 38482531 + antisense NOVEL OTTHUMG00000014632.1 840 560 2 ENSG00000199938.1 Y_RNA chr6 38565950 38566055 + misc_RNA NOVEL NA 106 106 1 ENSG00000217227.1 RP1-319M7.2 chr6 38587323 38588529 + processed_pseudogene KNOWN OTTHUMG00000014633.1 1207 1207 1 ENSG00000124767.6 GLO1 chr6 38675925 38703141 - protein_coding KNOWN OTTHUMG00000014636.2 27217 2352 9 ENSG00000236355.2 RP3-503A6.2 chr6 38714051 38715217 - lincRNA NOVEL OTTHUMG00000014635.2 1167 400 2 ENSG00000124721.16 DNAH8 chr6 38715341 39030529 + protein_coding KNOWN OTTHUMG00000016253.4 315189 15055 275 ENSG00000244297.3 RN7SL465P chr6 38744086 38744386 + misc_RNA KNOWN NA 301 301 1 ENSG00000219273.1 RP1-217P22.2 chr6 38762905 38764694 + processed_pseudogene KNOWN OTTHUMG00000016180.1 1790 1790 1 ENSG00000212586.1 SNORA8 chr6 38822307 38822404 - snoRNA NOVEL NA 98 98 1 ENSG00000033122.17 LRRC7 chr1 69568398 70151945 + protein_coding KNOWN OTTHUMG00000059194.6 583548 14652 122 ENSG00000231150.4 RP1-207H1.3 chr6 38923029 38953099 - antisense NOVEL OTTHUMG00000014637.1 30071 1213 10 ENSG00000220076.1 RP1-207H1.2 chr6 38928031 38928153 + processed_pseudogene KNOWN OTTHUMG00000016233.1 123 123 1 ENSG00000220556.4 RP1-202I21.3 chr6 39039603 39039985 - processed_pseudogene KNOWN OTTHUMG00000014639.1 383 383 1 ENSG00000112164.5 GLP1R chr6 39048798 39087743 + protein_coding KNOWN OTTHUMG00000014638.1 38946 3105 13 ENSG00000112167.8 SAYSD1 chr6 39104064 39115189 - protein_coding KNOWN OTTHUMG00000014641.1 11126 2925 6 ENSG00000217165.1 ANKRD18EP chr6 39110321 39112952 + processed_pseudogene KNOWN OTTHUMG00000014640.1 2632 2632 1 ENSG00000164626.8 KCNK5 chr6 39188973 39229450 - protein_coding KNOWN OTTHUMG00000014642.1 40478 3756 5 ENSG00000124780.12 KCNK17 chr6 39299001 39314553 - protein_coding KNOWN OTTHUMG00000014646.2 15553 2172 14 ENSG00000095981.9 KCNK16 chr6 39314698 39322968 - protein_coding KNOWN OTTHUMG00000014645.2 8271 1860 27 ENSG00000164627.16 KIF6 chr6 39329990 39725405 - protein_coding KNOWN OTTHUMG00000014648.4 395416 11868 95 ENSG00000270615.1 SGOL1P1 chr1 69606855 69608301 - processed_pseudogene KNOWN OTTHUMG00000184292.1 1447 1447 1 ENSG00000218986.1 RP1-137F1.3 chr6 39353747 39354172 + processed_pseudogene KNOWN OTTHUMG00000014644.1 426 426 1 ENSG00000231276.2 E2F4P1 chr6 39553811 39554943 + processed_pseudogene KNOWN OTTHUMG00000014650.3 1133 1133 1 ENSG00000252990.1 RNU1-54P chr6 39620345 39620464 - snRNA KNOWN NA 120 120 1 ENSG00000146122.15 DAAM2 chr6 39792366 39904877 + protein_coding KNOWN OTTHUMG00000014653.2 112512 7445 93 ENSG00000235033.6 RP11-61I13.3 chr6 39881804 39900071 - antisense NOVEL OTTHUMG00000014652.2 18268 6854 16 ENSG00000124615.16 MOCS1 chr6 39899578 39934551 - protein_coding KNOWN OTTHUMG00000014656.5 34974 5174 79 ENSG00000180211.5 RP1-278E11.3 chr6 39958414 39958833 - processed_pseudogene KNOWN OTTHUMG00000014654.1 420 420 1 ENSG00000220586.1 TUBBP9 chr6 39992815 40000233 + processed_pseudogene KNOWN OTTHUMG00000014655.1 7419 1099 2 ENSG00000227131.1 RP11-552E20.1 chr6 40271566 40276237 - lincRNA NOVEL OTTHUMG00000014657.1 4672 539 3 ENSG00000204091.6 TDRG1 chr6 40334954 40379887 + antisense NOVEL OTTHUMG00000014660.2 44934 1617 10 ENSG00000240692.3 RN7SL538P chr1 69879592 69879895 + misc_RNA KNOWN NA 304 304 1 ENSG00000204092.2 LINC00951 chr6 40344344 40346151 - lincRNA NOVEL OTTHUMG00000014658.1 1808 554 2 ENSG00000226070.1 RP11-552E20.4 chr6 40358744 40369474 - lincRNA NOVEL OTTHUMG00000014659.1 10731 824 2 ENSG00000156564.8 LRFN2 chr6 40391586 40587465 - protein_coding KNOWN OTTHUMG00000014662.1 195880 3270 3 ENSG00000280824.1 AL591063.1 chr6 40392730 40392874 + miRNA NOVEL NA 145 145 1 ENSG00000252767.1 RNU6-250P chr6 40407853 40407955 + snRNA KNOWN NA 103 103 1 ENSG00000236075.1 RP11-121P10.1 chr6 40501631 40502393 - sense_intronic NOVEL OTTHUMG00000014661.1 763 292 2 ENSG00000226454.1 RP3-462C17.1 chr6 40516336 40523933 - sense_intronic NOVEL OTTHUMG00000014663.2 7598 421 3 ENSG00000237947.1 RP11-570K4.1 chr6 40713411 40715363 - lincRNA NOVEL OTTHUMG00000014664.1 1953 613 3 ENSG00000124602.8 UNC5CL chr6 41026911 41039217 - protein_coding NOVEL OTTHUMG00000014665.1 12307 3136 22 ENSG00000124596.15 OARD1 chr6 41033627 41097787 - protein_coding KNOWN OTTHUMG00000014667.3 64161 6523 76 ENSG00000207776.1 MIR551A chr1 3560695 3560790 - miRNA KNOWN NA 96 96 1 ENSG00000229359.2 PIN1P1 chr1 69919322 69920317 + transcribed_processed_pseudogene KNOWN OTTHUMG00000009268.4 996 996 2 ENSG00000112212.10 TSPO2 chr6 41042554 41044337 + protein_coding KNOWN OTTHUMG00000014666.2 1784 988 11 ENSG00000124701.5 APOBEC2 chr6 41053304 41064511 + protein_coding KNOWN OTTHUMG00000014670.1 11208 1151 3 ENSG00000001167.13 NFYA chr6 41072945 41099976 + protein_coding KNOWN OTTHUMG00000014669.1 27032 3811 19 ENSG00000161912.16 ADCY10P1 chr6 41101022 41140835 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000014668.4 39814 5741 48 ENSG00000161911.10 TREML1 chr6 41149342 41154337 - protein_coding KNOWN OTTHUMG00000016231.2 4996 1483 20 ENSG00000095970.15 TREM2 chr6 41158506 41163186 - protein_coding KNOWN OTTHUMG00000014671.2 4681 1095 14 ENSG00000112195.8 TREML2 chr6 41190277 41201194 - protein_coding KNOWN OTTHUMG00000016349.3 10918 3302 5 ENSG00000184106.7 TREML3P chr6 41208713 41217947 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000177313.1 9235 978 9 ENSG00000188056.10 TREML4 chr6 41228324 41238882 + protein_coding KNOWN OTTHUMG00000016408.2 10559 2712 18 ENSG00000212176.1 RNA5SP207 chr6 41239520 41239626 - rRNA KNOWN NA 107 107 1 ENSG00000237919.4 RP11-181B18.1 chr1 70013982 70031222 - antisense NOVEL OTTHUMG00000009266.1 17241 948 6 ENSG00000225690.1 TREML5P chr6 41247369 41249649 + unprocessed_pseudogene KNOWN OTTHUMG00000154701.1 2281 576 2 ENSG00000274256.1 RP1-229K20.8 chr6 41250851 41251097 + processed_pseudogene KNOWN OTTHUMG00000187617.1 247 247 1 ENSG00000278745.1 RP1-229K20.9 chr6 41252696 41252858 + processed_pseudogene KNOWN OTTHUMG00000187619.1 163 163 1 ENSG00000124731.11 TREM1 chr6 41267926 41286719 - protein_coding KNOWN OTTHUMG00000014674.2 18794 4329 19 ENSG00000218809.1 RP1-229K20.5 chr6 41269875 41270239 - unprocessed_pseudogene KNOWN OTTHUMG00000014676.1 365 365 1 ENSG00000206745.1 RNU6-643P chr6 41302466 41302572 - snRNA KNOWN NA 107 107 1 ENSG00000213461.3 RP13-235E23.1 chr6 41308166 41308565 - processed_pseudogene KNOWN OTTHUMG00000014677.1 400 400 1 ENSG00000096264.12 NCR2 chr6 41335655 41350887 + protein_coding KNOWN OTTHUMG00000014678.5 15233 1219 17 ENSG00000279284.1 RP1-149M18.3 chr6 41381392 41381832 - TEC KNOWN OTTHUMG00000046223.1 441 441 1 ENSG00000280371.1 RP1-149M18.4 chr6 41405819 41406561 + TEC KNOWN OTTHUMG00000046224.1 743 743 1 ENSG00000066557.5 LRRC40 chr1 70144805 70205620 - protein_coding KNOWN OTTHUMG00000009348.1 60816 2884 15 ENSG00000234753.4 FOXP4-AS1 chr6 41494853 41548621 - antisense NOVEL OTTHUMG00000014680.3 53769 934 10 ENSG00000226917.4 LINC01276 chr6 41502444 41519852 + lincRNA NOVEL OTTHUMG00000067927.3 17409 999 5 ENSG00000137166.13 FOXP4 chr6 41546426 41602384 + protein_coding KNOWN OTTHUMG00000014679.7 55959 6170 87 ENSG00000266494.1 MIR4641 chr6 41598723 41598788 + miRNA KNOWN NA 66 66 1 ENSG00000112559.12 MDFI chr6 41636882 41654246 + protein_coding KNOWN OTTHUMG00000014681.5 17365 2523 37 ENSG00000230913.1 NPM1P51 chr6 41666906 41667649 + processed_pseudogene KNOWN OTTHUMG00000014682.2 744 744 1 ENSG00000112561.16 TFEB chr6 41683978 41736259 - protein_coding KNOWN OTTHUMG00000014684.12 52282 5648 101 ENSG00000231102.1 RP11-298J23.5 chr6 41720396 41734032 + antisense NOVEL OTTHUMG00000046284.2 13637 408 2 ENSG00000096088.15 PGC chr6 41736711 41754109 - protein_coding KNOWN OTTHUMG00000014683.6 17399 2025 23 ENSG00000269387.1 RP11-298J23.8 chr6 41764292 41764460 - lincRNA NOVEL OTTHUMG00000183011.1 169 169 1 ENSG00000244389.3 RN7SL242P chr1 70180144 70180440 - misc_RNA KNOWN NA 297 297 1 ENSG00000137218.9 FRS3 chr6 41770176 41786542 - protein_coding KNOWN OTTHUMG00000014686.5 16367 2858 25 ENSG00000124593.13 PRICKLE4 chr6 41780349 41790141 + protein_coding NOVEL OTTHUMG00000014685.9 9793 4479 42 ENSG00000278224.3 PRICKLE4 chr6 41783474 41787129 + protein_coding KNOWN OTTHUMG00000188149.1 3656 1714 21 ENSG00000214736.6 TOMM6 chr6 41787662 41789898 + protein_coding KNOWN OTTHUMG00000137505.1 2237 637 6 ENSG00000164663.12 USP49 chr6 41789896 41895361 - protein_coding KNOWN OTTHUMG00000014688.9 105466 10921 38 ENSG00000268745.1 RP11-298J23.9 chr6 41791410 41791477 + antisense NOVEL OTTHUMG00000183012.1 68 68 1 ENSG00000206977.1 SNORA8 chr6 41832854 41832993 + snoRNA NOVEL NA 140 140 1 ENSG00000227516.1 RP5-973N23.4 chr6 41868622 41869731 + lincRNA NOVEL OTTHUMG00000046310.1 1110 403 2 ENSG00000124641.13 MED20 chr6 41905354 41921139 - protein_coding KNOWN OTTHUMG00000014689.5 15786 3278 32 ENSG00000207371.1 Y_RNA chr6 41917416 41917526 - misc_RNA NOVEL NA 111 111 1 ENSG00000116754.12 SRSF11 chr1 70205682 70253052 + protein_coding KNOWN OTTHUMG00000009342.3 47371 8473 106 ENSG00000112578.8 BYSL chr6 41921188 41933046 + protein_coding KNOWN OTTHUMG00000014687.2 11859 2248 24 ENSG00000112576.11 CCND3 chr6 41934933 42050357 - protein_coding KNOWN OTTHUMG00000014690.6 115425 5802 78 ENSG00000206875.1 RNU6-761P chr6 42018408 42018514 - snRNA KNOWN NA 107 107 1 ENSG00000223946.1 RP11-533O20.2 chr6 42030053 42031382 + lincRNA NOVEL OTTHUMG00000014691.1 1330 161 2 ENSG00000137413.14 TAF8 chr6 42050513 42087461 + protein_coding KNOWN OTTHUMG00000014692.3 36949 9286 68 ENSG00000261068.2 RP11-7K24.3 chr6 42092233 42094259 - lincRNA NOVEL OTTHUMG00000175914.2 2027 2027 1 ENSG00000188112.7 C6orf132 chr6 42101118 42142619 - protein_coding KNOWN OTTHUMG00000014695.3 41502 6852 8 ENSG00000048545.12 GUCA1A chr6 42155406 42180056 + protein_coding KNOWN OTTHUMG00000014696.2 24651 2341 27 ENSG00000214732.2 RP1-139D8.6 chr6 42155426 42163439 + protein_coding PUTATIVE OTTHUMG00000014693.3 8014 688 4 ENSG00000112599.8 GUCA1B chr6 42184401 42194916 - protein_coding KNOWN OTTHUMG00000014697.1 10516 1113 4 ENSG00000228988.1 RP4-677H15.4 chr1 70218589 70221023 - antisense NOVEL OTTHUMG00000009341.1 2435 457 2 ENSG00000048544.5 MRPS10 chr6 42206801 42217865 - protein_coding KNOWN OTTHUMG00000014694.1 11065 2110 7 ENSG00000124496.11 TRERF1 chr6 42224931 42452051 - protein_coding KNOWN OTTHUMG00000014698.2 227121 7732 85 ENSG00000237107.3 RP11-256G5.1 chr6 42499710 42500022 + processed_pseudogene KNOWN OTTHUMG00000014699.2 313 313 1 ENSG00000024048.9 UBR2 chr6 42564062 42693504 + protein_coding KNOWN OTTHUMG00000014703.2 129443 8840 106 ENSG00000206848.1 RNU6-890P chr6 42664162 42664268 + snRNA KNOWN NA 107 107 1 ENSG00000112619.7 PRPH2 chr6 42696600 42722574 - protein_coding KNOWN OTTHUMG00000014701.2 25975 2976 3 ENSG00000213435.3 ATP6V0CP3 chr6 42727234 42727700 + processed_pseudogene KNOWN OTTHUMG00000014702.1 467 467 1 ENSG00000124659.6 TBCC chr6 42744481 42746096 - protein_coding KNOWN OTTHUMG00000014704.1 1616 1616 1 ENSG00000112624.11 GLTSCR1L chr6 42746958 42868560 + protein_coding KNOWN OTTHUMG00000014706.3 121603 6843 40 ENSG00000146223.13 RPL7L1 chr6 42879618 42889925 + protein_coding KNOWN OTTHUMG00000014710.3 10308 7809 45 ENSG00000118454.11 ANKRD13C chr1 70260588 70354734 - protein_coding KNOWN OTTHUMG00000009343.2 94147 4595 38 ENSG00000221821.3 C6orf226 chr6 42890265 42890816 - protein_coding KNOWN OTTHUMG00000156926.1 552 552 1 ENSG00000171611.8 PTCRA chr6 42915989 42925835 + protein_coding KNOWN OTTHUMG00000014709.2 9847 1168 16 ENSG00000137161.15 CNPY3 chr6 42929192 42939287 + protein_coding KNOWN OTTHUMG00000014708.1 10096 1712 12 ENSG00000231113.2 RP3-475N16.1 chr6 42940364 42948360 + antisense NOVEL OTTHUMG00000014707.3 7997 1490 6 ENSG00000181524.6 RPL24P4 chr6 42956345 42956765 - processed_pseudogene KNOWN OTTHUMG00000014711.2 421 421 1 ENSG00000124713.5 GNMT chr6 42960758 42963880 + protein_coding KNOWN OTTHUMG00000014712.1 3123 1072 6 ENSG00000124587.12 PEX6 chr6 42963870 42979220 - protein_coding KNOWN OTTHUMG00000014713.1 15351 3499 32 ENSG00000112640.13 PPP2R5D chr6 42984499 43012342 + protein_coding KNOWN OTTHUMG00000014716.3 27844 3314 105 ENSG00000124733.3 MEA1 chr6 43012094 43013968 - protein_coding KNOWN OTTHUMG00000014717.2 1875 1089 4 ENSG00000124702.16 KLHDC3 chr6 43014103 43021298 + protein_coding KNOWN OTTHUMG00000014714.2 7196 2019 33 ENSG00000197568.12 HHLA3 chr1 70354805 70385339 + protein_coding KNOWN OTTHUMG00000009346.4 30535 1222 23 ENSG00000124541.6 RRP36 chr6 43021645 43034156 + protein_coding KNOWN OTTHUMG00000014715.2 12512 2212 13 ENSG00000272223.1 RP1-20C7.6 chr6 43033897 43034405 - antisense NOVEL OTTHUMG00000185747.1 509 509 1 ENSG00000240625.3 RN7SL403P chr6 43036196 43036500 - misc_RNA KNOWN NA 305 305 1 ENSG00000044090.7 CUL7 chr6 43037617 43053945 - protein_coding KNOWN OTTHUMG00000014718.1 16329 5628 59 ENSG00000137171.13 KLC4 chr6 43040777 43075099 + protein_coding KNOWN OTTHUMG00000014720.6 34323 6421 146 ENSG00000112651.10 MRPL2 chr6 43054029 43059806 - protein_coding KNOWN OTTHUMG00000014719.2 5778 2539 36 ENSG00000272170.1 RP11-387M24.5 chr6 43074331 43074739 - antisense NOVEL OTTHUMG00000185748.1 409 409 1 ENSG00000112655.14 PTK7 chr6 43076268 43161719 + protein_coding KNOWN OTTHUMG00000014721.3 85452 9024 205 ENSG00000112658.7 SRF chr6 43171299 43181507 + protein_coding KNOWN OTTHUMG00000014722.2 10209 4202 7 ENSG00000112659.12 CUL9 chr6 43182175 43224587 + protein_coding KNOWN OTTHUMG00000014723.3 42413 12251 181 ENSG00000226088.1 RP11-180O5.2 chr1 70359562 70360437 - antisense NOVEL OTTHUMG00000009344.1 876 575 2 ENSG00000245261.1 RP3-330M21.5 chr6 43213801 43223860 - antisense NOVEL OTTHUMG00000159928.1 10060 980 2 ENSG00000112667.11 DNPH1 chr6 43225629 43229484 - protein_coding KNOWN OTTHUMG00000014724.2 3856 1250 13 ENSG00000146216.10 TTBK1 chr6 43243680 43288259 + protein_coding KNOWN OTTHUMG00000014725.5 44580 7503 28 ENSG00000137204.13 SLC22A7 chr6 43295694 43305538 + protein_coding KNOWN OTTHUMG00000014726.5 9845 3527 59 ENSG00000146215.12 CRIP3 chr6 43299710 43308797 - protein_coding KNOWN OTTHUMG00000014727.2 9088 2453 31 ENSG00000171467.14 ZNF318 chr6 43307134 43369478 - protein_coding KNOWN OTTHUMG00000014732.3 62345 9559 26 ENSG00000219222.1 RP11-480N24.3 chr6 43310231 43310357 + processed_pseudogene KNOWN OTTHUMG00000014728.1 127 127 1 ENSG00000220614.1 RP11-480N24.4 chr6 43328134 43328476 + processed_pseudogene KNOWN OTTHUMG00000014729.1 343 343 1 ENSG00000179157.4 RPS2P28 chr6 43363479 43364219 + processed_pseudogene KNOWN OTTHUMG00000014730.1 741 741 1 ENSG00000226558.1 RP11-213N20.1 chr6 43364220 43364294 + processed_pseudogene KNOWN OTTHUMG00000014731.1 75 75 1 ENSG00000279230.1 AL158839.1 chr1 70363780 70366135 - protein_coding KNOWN NA 2356 57 3 ENSG00000124574.13 ABCC10 chr6 43427366 43450430 + protein_coding KNOWN OTTHUMG00000014733.3 23065 8083 82 ENSG00000276770.1 MIR6780B chr6 43434542 43434620 + miRNA KNOWN NA 79 79 1 ENSG00000171462.13 DLK2 chr6 43450352 43456632 - protein_coding KNOWN OTTHUMG00000014735.2 6281 2236 21 ENSG00000207076.1 RNU6-1113P chr6 43474186 43474292 + snRNA KNOWN NA 107 107 1 ENSG00000137221.13 TJAP1 chr6 43477523 43506556 + protein_coding KNOWN OTTHUMG00000014736.7 29034 6741 127 ENSG00000204052.4 LRRC73 chr6 43506969 43510686 - protein_coding KNOWN OTTHUMG00000014737.1 3718 2121 6 ENSG00000171453.16 POLR1C chr6 43509702 43529585 + protein_coding KNOWN OTTHUMG00000014739.4 19884 2867 57 ENSG00000137207.10 YIPF3 chr6 43511827 43516990 - protein_coding KNOWN OTTHUMG00000014738.4 5164 3053 93 ENSG00000271754.1 RP3-337H4.9 chr6 43519180 43519724 - antisense NOVEL OTTHUMG00000185749.1 545 545 1 ENSG00000124571.16 XPO5 chr6 43522330 43576075 - protein_coding KNOWN OTTHUMG00000014742.9 53746 8522 88 ENSG00000238260.1 RP11-46F15.2 chr1 3623190 3624743 - antisense NOVEL OTTHUMG00000000613.1 1554 622 3 ENSG00000116761.10 CTH chr1 70411218 70439851 + protein_coding KNOWN OTTHUMG00000009352.1 28634 2414 43 ENSG00000219470.1 RP3-337H4.6 chr6 43538822 43539703 - processed_pseudogene KNOWN OTTHUMG00000014740.1 882 882 1 ENSG00000252218.1 SCARNA15 chr6 43544144 43544270 + scaRNA NOVEL NA 127 127 1 ENSG00000271970.1 RP3-337H4.10 chr6 43561872 43562419 + antisense NOVEL OTTHUMG00000185750.1 548 548 1 ENSG00000170734.10 POLH chr6 43576150 43615660 + protein_coding KNOWN OTTHUMG00000014743.1 39511 3540 25 ENSG00000203362.2 RP3-337H4.8 chr6 43588230 43591362 - antisense NOVEL OTTHUMG00000014741.1 3133 990 2 ENSG00000172432.17 GTPBP2 chr6 43605316 43629162 - protein_coding KNOWN OTTHUMG00000014744.11 23847 4624 62 ENSG00000124688.12 MAD2L1BP chr6 43629540 43640952 + protein_coding KNOWN OTTHUMG00000014747.2 11413 1880 9 ENSG00000275849.1 AL353602.1 chr6 43631501 43631601 - miRNA NOVEL NA 101 101 1 ENSG00000172426.14 RSPH9 chr6 43645046 43672599 + protein_coding KNOWN OTTHUMG00000014746.1 27554 2631 11 ENSG00000096080.10 MRPS18A chr6 43671303 43687791 - protein_coding KNOWN OTTHUMG00000014750.2 16489 1284 16 ENSG00000278636.1 Metazoa_SRP chr1 70430896 70431178 + misc_RNA NOVEL NA 283 283 1 ENSG00000218107.1 RP1-261G23.4 chr6 43705949 43706751 - processed_pseudogene KNOWN OTTHUMG00000014748.1 803 803 1 ENSG00000236961.1 RP1-261G23.5 chr6 43722786 43737834 - lincRNA NOVEL OTTHUMG00000014749.1 15049 348 3 ENSG00000112715.19 VEGFA chr6 43770184 43786487 + protein_coding KNOWN OTTHUMG00000014745.12 16304 14431 178 ENSG00000272114.1 RP1-261G23.7 chr6 43770429 43770616 - antisense NOVEL OTTHUMG00000185751.1 188 188 1 ENSG00000223469.1 RP11-344J7.2 chr6 43851757 43852333 - lincRNA NOVEL OTTHUMG00000014751.1 577 394 2 ENSG00000237686.5 RP5-1120P11.1 chr6 43995723 44074652 - antisense NOVEL OTTHUMG00000014752.2 78930 2296 9 ENSG00000181577.14 C6orf223 chr6 44000580 44005958 + protein_coding KNOWN OTTHUMG00000014753.4 5379 3917 14 ENSG00000265518.1 AL109615.1 chr6 44013001 44013101 + miRNA NOVEL NA 101 101 1 ENSG00000231881.1 RP5-1120P11.3 chr6 44073913 44077952 + lincRNA NOVEL OTTHUMG00000014754.1 4040 1608 2 ENSG00000183239.5 RP5-1120P11.4 chr6 44089242 44089696 - processed_pseudogene KNOWN OTTHUMG00000014755.1 455 455 1 ENSG00000271992.1 RP11-42O15.3 chr1 70445071 70445536 + lincRNA NOVEL OTTHUMG00000185818.1 466 466 1 ENSG00000180992.6 MRPL14 chr6 44113454 44127457 - protein_coding KNOWN OTTHUMG00000014756.2 14004 959 3 ENSG00000137216.17 TMEM63B chr6 44126914 44155519 + protein_coding KNOWN OTTHUMG00000014757.2 28606 4425 136 ENSG00000137225.11 CAPN11 chr6 44158811 44184402 + protein_coding KNOWN OTTHUMG00000014758.3 25592 3549 52 ENSG00000265439.2 RN7SL811P chr6 44209766 44210063 + misc_RNA KNOWN NA 298 298 1 ENSG00000262179.2 RP1-302G2.5 chr6 44216939 44218236 + lincRNA NOVEL OTTHUMG00000177883.2 1298 843 4 ENSG00000112759.15 SLC29A1 chr6 44219505 44234151 + protein_coding KNOWN OTTHUMG00000014759.2 14647 3333 127 ENSG00000096384.18 HSP90AB1 chr6 44246166 44253888 + protein_coding KNOWN OTTHUMG00000014761.7 7723 2980 48 ENSG00000157593.15 SLC35B2 chr6 44254096 44257890 - protein_coding KNOWN OTTHUMG00000014760.2 3795 2363 23 ENSG00000265700.1 MIR4647 chr6 44254206 44254285 - miRNA KNOWN NA 80 80 1 ENSG00000146232.13 NFKBIE chr6 44258166 44265788 - protein_coding KNOWN OTTHUMG00000014762.7 7623 2581 26 ENSG00000233020.1 RP11-42O15.2 chr1 70530526 70531492 + processed_pseudogene KNOWN OTTHUMG00000009347.1 967 967 1 ENSG00000178233.16 TMEM151B chr6 44270466 44307506 + protein_coding KNOWN OTTHUMG00000014765.4 37041 5459 6 ENSG00000272442.2 RP11-444E17.6 chr6 44273194 44378957 + protein_coding NOVEL OTTHUMG00000185389.1 105764 3513 10 ENSG00000146221.9 TCTE1 chr6 44278743 44297688 - protein_coding KNOWN OTTHUMG00000014763.1 18946 3067 7 ENSG00000124608.4 AARS2 chr6 44299654 44313326 - protein_coding KNOWN OTTHUMG00000014766.2 13673 4298 24 ENSG00000249481.5 SPATS1 chr6 44342660 44377167 + protein_coding KNOWN OTTHUMG00000014764.4 34508 1569 30 ENSG00000096401.7 CDC5L chr6 44387525 44450426 + protein_coding KNOWN OTTHUMG00000014767.1 62902 6423 16 ENSG00000266619.1 MIR4642 chr6 44435641 44435722 + miRNA KNOWN NA 82 82 1 ENSG00000237530.1 RP3-449H6.1 chr6 44525259 44526754 + lincRNA NOVEL OTTHUMG00000014768.1 1496 473 3 ENSG00000279076.1 RP3-449H6.2 chr6 44551577 44553281 + TEC KNOWN OTTHUMG00000175916.1 1705 1705 1 ENSG00000196284.12 SUPT3H chr6 44809317 45377953 - protein_coding KNOWN OTTHUMG00000014773.5 568637 5205 52 ENSG00000237033.2 CASP3P1 chr1 70660657 70661265 - processed_pseudogene KNOWN OTTHUMG00000009345.2 609 609 1 ENSG00000270900.1 NUDT19P4 chr6 44898711 44899295 + processed_pseudogene KNOWN OTTHUMG00000184541.1 585 585 1 ENSG00000276156.1 RP11-491H9.4 chr6 45097496 45097976 + unprocessed_pseudogene KNOWN OTTHUMG00000187622.1 481 239 2 ENSG00000277769.1 RBM22P4 chr6 45098021 45099260 + processed_pseudogene KNOWN OTTHUMG00000187623.1 1240 1240 1 ENSG00000219384.1 RP11-491H9.3 chr6 45158870 45159511 + processed_pseudogene KNOWN OTTHUMG00000014770.1 642 642 1 ENSG00000207769.1 MIR586 chr6 45197674 45197770 - miRNA KNOWN NA 97 97 1 ENSG00000124813.19 RUNX2 chr6 45328157 45664349 + protein_coding KNOWN OTTHUMG00000014774.6 336193 8192 71 ENSG00000271857.1 RP1-244F24.1 chr6 45421079 45422005 - antisense NOVEL OTTHUMG00000185755.1 927 927 1 ENSG00000261080.1 RP1-166H4.2 chr6 45573346 45576770 - lincRNA NOVEL OTTHUMG00000175917.1 3425 1513 2 ENSG00000112782.14 CLIC5 chr6 45898451 46080395 - protein_coding KNOWN OTTHUMG00000014775.3 181945 8997 34 ENSG00000212468.1 RNU6-754P chr6 46018745 46018851 + snRNA KNOWN NA 107 107 1 ENSG00000229051.1 RP5-952N6.1 chr1 70706453 70786468 + lincRNA NOVEL OTTHUMG00000009349.1 80016 2086 7 ENSG00000231769.2 RP1-8B1.4 chr6 46097093 46129706 - antisense NOVEL OTTHUMG00000014778.2 32614 739 6 ENSG00000001561.6 ENPP4 chr6 46129993 46146699 + protein_coding KNOWN OTTHUMG00000014779.2 16707 4651 4 ENSG00000112796.8 ENPP5 chr6 46159187 46170971 - protein_coding KNOWN OTTHUMG00000014781.2 11785 4264 11 ENSG00000229349.2 ACTG1P9 chr6 46204729 46207386 + processed_pseudogene KNOWN OTTHUMG00000014780.1 2658 2658 1 ENSG00000172348.13 RCAN2 chr6 46220736 46491972 - protein_coding KNOWN OTTHUMG00000014782.2 271237 3712 19 ENSG00000226541.1 RP11-795J1.2 chr6 46438310 46438619 + processed_pseudogene KNOWN OTTHUMG00000157123.1 310 310 1 ENSG00000236466.1 RP11-795J1.1 chr6 46492052 46532758 + antisense NOVEL OTTHUMG00000014783.1 40707 622 3 ENSG00000146233.6 CYP39A1 chr6 46549580 46652830 - protein_coding KNOWN OTTHUMG00000014785.1 103251 3111 32 ENSG00000153291.14 SLC25A27 chr6 46652915 46678193 + protein_coding KNOWN OTTHUMG00000014786.5 25279 3288 43 ENSG00000242973.5 RP11-446F17.3 chr6 46670444 46688165 - antisense NOVEL OTTHUMG00000014787.2 17722 575 6 ENSG00000226208.1 RP11-99H8.1 chr1 70715933 70720289 - lincRNA NOVEL OTTHUMG00000009350.1 4357 432 2 ENSG00000180113.14 TDRD6 chr6 46687875 46704319 + protein_coding KNOWN OTTHUMG00000014788.1 16445 9041 12 ENSG00000146070.15 PLA2G7 chr6 46704201 46735693 - protein_coding KNOWN OTTHUMG00000014789.1 31493 2026 24 ENSG00000230062.5 ANKRD66 chr6 46746917 46759506 + protein_coding KNOWN OTTHUMG00000014791.2 12590 3692 7 ENSG00000236164.1 RP11-268F1.3 chr6 46758296 46761158 - lincRNA NOVEL OTTHUMG00000014792.1 2863 761 2 ENSG00000112818.8 MEP1A chr6 46793390 46839782 + protein_coding KNOWN OTTHUMG00000014790.1 46393 2980 27 ENSG00000069122.17 GPR116 chr6 46852512 46954943 - protein_coding KNOWN OTTHUMG00000014793.2 102432 6650 49 ENSG00000225730.1 RP3-365O12.2 chr6 46903471 46909078 + antisense NOVEL OTTHUMG00000014794.1 5608 781 4 ENSG00000153292.14 GPR110 chr6 46997703 47042363 - protein_coding KNOWN OTTHUMG00000014795.2 44661 12401 101 ENSG00000146072.6 TNFRSF21 chr6 47231532 47309905 - protein_coding KNOWN OTTHUMG00000014796.1 78374 3595 6 ENSG00000271328.1 B3GNTL1P2 chr6 47368943 47369230 + processed_pseudogene KNOWN OTTHUMG00000184538.1 288 288 1 ENSG00000050628.19 PTGER3 chr1 70852353 71047808 - protein_coding KNOWN OTTHUMG00000009399.5 195456 9653 52 ENSG00000270761.1 RP11-385F7.1 chr6 47477243 47477572 - lincRNA NOVEL OTTHUMG00000185189.1 330 330 1 ENSG00000198087.7 CD2AP chr6 47477789 47627263 + protein_coding KNOWN OTTHUMG00000014799.2 149475 6751 28 ENSG00000199762.1 Y_RNA chr6 47489067 47489170 + misc_RNA NOVEL NA 104 104 1 ENSG00000216813.1 RP11-812I20.2 chr6 47562622 47563018 + processed_pseudogene KNOWN OTTHUMG00000014798.1 397 397 1 ENSG00000164393.7 GPR111 chr6 47656436 47697797 + protein_coding KNOWN OTTHUMG00000046168.3 41362 6395 32 ENSG00000153294.10 GPR115 chr6 47685864 47722021 + protein_coding KNOWN OTTHUMG00000014800.2 36158 3391 31 ENSG00000252711.1 RN7SKP116 chr6 47715283 47715601 + misc_RNA KNOWN NA 319 319 1 ENSG00000226594.1 RP11-550C4.6 chr6 47729827 47740741 - lincRNA NOVEL OTTHUMG00000014802.1 10915 197 2 ENSG00000216616.1 RP11-550C4.4 chr6 47752828 47753240 - processed_pseudogene KNOWN OTTHUMG00000014801.1 413 413 1 ENSG00000124818.13 OPN5 chr6 47781982 47832780 + protein_coding KNOWN OTTHUMG00000014803.2 50799 5078 30 ENSG00000235782.1 RP3-333A15.1 chr1 70947379 70951493 + antisense NOVEL OTTHUMG00000009400.1 4115 749 3 ENSG00000200340.1 RNU1-105P chr6 47823390 47823550 + snRNA KNOWN NA 161 161 1 ENSG00000244694.6 PTCHD4 chr6 47878028 48068689 - protein_coding KNOWN OTTHUMG00000150404.2 190662 5177 6 ENSG00000226068.1 HNRNPA3P4 chr6 48149203 48150005 - processed_pseudogene KNOWN OTTHUMG00000014806.1 803 803 1 ENSG00000216835.3 RBMXP1 chr6 48213604 48214794 - processed_pseudogene KNOWN OTTHUMG00000014807.1 1191 1191 1 ENSG00000278736.1 RP1-281E18.1 chr6 48701491 48701872 - processed_pseudogene KNOWN OTTHUMG00000187628.2 382 382 1 ENSG00000271162.1 RP1-57E3.1 chr6 48952070 48952781 - processed_pseudogene KNOWN OTTHUMG00000184591.1 712 712 1 ENSG00000218337.1 RP4-724P12.1 chr6 49077712 49078051 - processed_pseudogene KNOWN OTTHUMG00000014808.1 340 340 1 ENSG00000274867.1 RP4-724P12.2 chr6 49115537 49116115 + processed_pseudogene KNOWN OTTHUMG00000187629.1 579 579 1 ENSG00000217631.1 RP1-142O9.2 chr6 49273600 49273794 + processed_pseudogene KNOWN OTTHUMG00000014810.1 195 195 1 ENSG00000252457.1 RNU7-65P chr6 49344800 49344861 - snRNA KNOWN NA 62 62 1 ENSG00000269933.1 RP3-333A15.2 chr1 71005854 71006502 - sense_intronic NOVEL OTTHUMG00000183932.1 649 649 1 ENSG00000277043.1 EEF1A1P42 chr6 49358185 49360420 - processed_pseudogene KNOWN OTTHUMG00000014809.2 2236 1331 2 ENSG00000146085.7 MUT chr6 49430360 49463191 - protein_coding KNOWN OTTHUMG00000014814.1 32832 3749 13 ENSG00000031691.6 CENPQ chr6 49463378 49493107 + protein_coding KNOWN OTTHUMG00000014815.2 29730 1733 9 ENSG00000203972.8 GLYATL3 chr6 49499958 49527047 + protein_coding KNOWN OTTHUMG00000014818.3 27090 1124 12 ENSG00000197261.10 C6orf141 chr6 49550646 49561907 + protein_coding KNOWN OTTHUMG00000014820.6 11262 2940 18 ENSG00000216998.1 CYP2AC1P chr6 49565924 49580166 - unitary_pseudogene KNOWN OTTHUMG00000014821.1 14243 1173 7 ENSG00000112077.14 RHAG chr6 49605158 49636839 - protein_coding KNOWN OTTHUMG00000016377.1 31682 1912 30 ENSG00000124490.12 CRISP2 chr6 49692358 49713590 - protein_coding KNOWN OTTHUMG00000014822.2 21233 1518 30 ENSG00000279127.1 RP3-442L6.4 chr6 49721931 49724007 + TEC KNOWN OTTHUMG00000175918.1 2077 2077 1 ENSG00000096006.10 CRISP3 chr6 49727384 49744437 - protein_coding KNOWN OTTHUMG00000014823.2 17054 2247 30 ENSG00000158109.13 TPRG1L chr1 3625002 3630127 + protein_coding KNOWN OTTHUMG00000000609.1 5126 2414 9 ENSG00000235079.1 ZRANB2-AS1 chr1 71048855 71067184 + antisense NOVEL OTTHUMG00000009659.1 18330 967 4 ENSG00000170950.4 PGK2 chr6 49785934 49787187 - protein_coding KNOWN OTTHUMG00000014824.1 1254 1254 1 ENSG00000235122.3 RP3-417L20.4 chr6 49817430 49820442 + antisense NOVEL OTTHUMG00000014826.2 3013 377 3 ENSG00000226707.1 RP11-719J20.1 chr6 49823712 49824782 - lincRNA NOVEL OTTHUMG00000014828.1 1071 400 3 ENSG00000124812.13 CRISP1 chr6 49834257 49877096 - protein_coding KNOWN OTTHUMG00000014827.2 42840 2000 29 ENSG00000214643.5 DEFB133 chr6 49946101 49949444 - protein_coding KNOWN OTTHUMG00000187384.2 3344 186 4 ENSG00000177684.3 DEFB114 chr6 49960249 49964105 - protein_coding KNOWN OTTHUMG00000160209.1 3857 253 2 ENSG00000214642.1 DEFB113 chr6 49968677 49969625 - protein_coding KNOWN OTTHUMG00000160210.1 949 249 2 ENSG00000203970.3 DEFB110 chr6 50009138 50021981 - protein_coding KNOWN OTTHUMG00000160208.1 12844 518 4 ENSG00000180872.4 DEFB112 chr6 50043575 50048651 - protein_coding KNOWN OTTHUMG00000160215.1 5077 342 2 ENSG00000226733.1 RP11-397G17.1 chr6 50093711 50099282 + lincRNA NOVEL OTTHUMG00000014829.1 5572 692 2 ENSG00000132485.11 ZRANB2 chr1 71063291 71081297 - protein_coding KNOWN OTTHUMG00000009660.1 18007 4993 52 ENSG00000233470.1 RP11-524K22.1 chr6 50514035 50521104 + lincRNA NOVEL OTTHUMG00000014830.1 7070 285 2 ENSG00000230472.4 RP1-28O17.1 chr6 50587607 50637205 - lincRNA NOVEL OTTHUMG00000014831.1 49599 826 9 ENSG00000008197.4 TFAP2D chr6 50713828 50772988 + protein_coding NOVEL OTTHUMG00000014832.1 59161 1856 14 ENSG00000008196.11 TFAP2B chr6 50818723 50847613 + protein_coding KNOWN OTTHUMG00000014836.3 28891 6149 13 ENSG00000060303.5 RPS17P5 chr6 50857255 50857662 - processed_pseudogene KNOWN OTTHUMG00000014833.3 408 408 1 ENSG00000216913.2 RP4-753D5.3 chr6 50897615 50898225 - processed_pseudogene KNOWN OTTHUMG00000014834.2 611 611 1 ENSG00000230204.1 FTH1P5 chr6 50912712 50913256 - processed_pseudogene KNOWN OTTHUMG00000014835.1 545 545 1 ENSG00000270306.1 RP3-437C15.2 chr6 51385282 51385849 - processed_pseudogene KNOWN OTTHUMG00000184589.1 568 568 1 ENSG00000232702.3 RP3-437C15.1 chr6 51410081 51410537 - processed_pseudogene KNOWN OTTHUMG00000014837.1 457 457 1 ENSG00000212532.1 SNORD66 chr6 51464690 51464765 + snoRNA NOVEL NA 76 76 1 ENSG00000207721.1 MIR186 chr1 71067631 71067716 - miRNA KNOWN NA 86 86 1 ENSG00000214641.3 RP11-793K1.1 chr6 51537155 51537543 - processed_pseudogene KNOWN OTTHUMG00000014838.2 389 389 1 ENSG00000228689.6 RP3-335N17.2 chr6 51599723 51622884 + antisense NOVEL OTTHUMG00000014839.5 23162 1446 7 ENSG00000170927.13 PKHD1 chr6 51615300 52087625 - protein_coding KNOWN OTTHUMG00000014841.1 472326 17454 128 ENSG00000240641.3 RN7SL580P chr6 51975673 51975959 + misc_RNA KNOWN NA 287 287 1 ENSG00000207604.2 MIR206 chr6 52144331 52144442 + miRNA KNOWN NA 112 112 1 ENSG00000225613.2 LINCMD1 chr6 52146814 52151119 - lincRNA NOVEL OTTHUMG00000014842.1 4306 462 3 ENSG00000199080.1 MIR133B chr6 52148923 52149041 + miRNA KNOWN NA 119 119 1 ENSG00000112115.5 IL17A chr6 52186387 52190638 + protein_coding KNOWN OTTHUMG00000014840.1 4252 1859 3 ENSG00000112116.9 IL17F chr6 52236681 52244537 - protein_coding KNOWN OTTHUMG00000014845.3 7857 1067 5 ENSG00000218363.1 SLC25A20P1 chr6 52246460 52247362 + processed_pseudogene KNOWN OTTHUMG00000014843.1 903 903 1 ENSG00000229956.8 ZRANB2-AS2 chr1 71081324 71489976 + processed_transcript NOVEL OTTHUMG00000009733.9 408653 6794 230 ENSG00000112118.16 MCM3 chr6 52264009 52284881 - protein_coding KNOWN OTTHUMG00000014844.3 20873 3650 84 ENSG00000170915.8 PAQR8 chr6 52361421 52407777 + protein_coding KNOWN OTTHUMG00000014846.2 46357 5057 7 ENSG00000096093.13 EFHC1 chr6 52420308 52495785 + protein_coding KNOWN OTTHUMG00000014848.4 75478 7162 40 ENSG00000065308.4 TRAM2 chr6 52497402 52576915 - protein_coding KNOWN OTTHUMG00000014850.1 79514 6908 11 ENSG00000225791.5 TRAM2-AS1 chr6 52577307 52583993 + lincRNA NOVEL OTTHUMG00000014849.4 6687 2546 13 ENSG00000270382.1 RP1-152L7.9 chr6 52657373 52657651 + processed_pseudogene KNOWN OTTHUMG00000184537.1 279 279 1 ENSG00000216775.2 RP1-152L7.5 chr6 52665148 52669155 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000014854.2 4008 3039 5 ENSG00000096092.5 TMEM14A chr6 52671109 52686588 + protein_coding KNOWN OTTHUMG00000014856.1 15480 992 5 ENSG00000220377.1 GSTA8P chr6 52687930 52703825 - unprocessed_pseudogene KNOWN OTTHUMG00000014853.1 15896 637 5 ENSG00000271227.1 RP1-152L7.8 chr6 52688661 52688998 + processed_pseudogene KNOWN OTTHUMG00000184535.1 338 338 1 ENSG00000264239.1 AL360297.1 chr1 71141975 71142068 - miRNA NOVEL NA 94 94 1 ENSG00000237674.1 GSTA7P chr6 52739590 52744656 - unprocessed_pseudogene KNOWN OTTHUMG00000014855.1 5067 448 4 ENSG00000244067.2 GSTA2 chr6 52750089 52763569 - protein_coding KNOWN OTTHUMG00000016263.2 13481 1313 7 ENSG00000217228.1 GSTA12P chr6 52765280 52778347 - unprocessed_pseudogene KNOWN OTTHUMG00000014852.1 13068 508 4 ENSG00000243955.4 GSTA1 chr6 52791664 52803910 - protein_coding KNOWN OTTHUMG00000014861.1 12247 1019 16 ENSG00000223622.1 GSTA6P chr6 52805613 52813460 - unprocessed_pseudogene KNOWN OTTHUMG00000014858.1 7848 577 5 ENSG00000182793.9 GSTA5 chr6 52831655 52870329 - protein_coding KNOWN OTTHUMG00000014857.1 38675 1019 24 ENSG00000174156.12 GSTA3 chr6 52847910 52909685 - protein_coding KNOWN OTTHUMG00000014865.2 61776 1025 23 ENSG00000230375.1 GSTA11P chr6 52847910 52870329 - unprocessed_pseudogene KNOWN OTTHUMG00000014859.1 22420 669 6 ENSG00000230845.1 GSTA10P chr6 52873014 52879940 - unprocessed_pseudogene KNOWN OTTHUMG00000014860.1 6927 576 5 ENSG00000243236.5 GSTA9P chr6 52939726 52957521 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000014863.2 17796 889 9 ENSG00000237726.1 RP11-386O9.2 chr1 71250999 71252119 + lincRNA NOVEL OTTHUMG00000009658.1 1121 518 2 ENSG00000170899.9 GSTA4 chr6 52977948 52995378 - protein_coding KNOWN OTTHUMG00000014868.3 17431 2175 32 ENSG00000202198.1 RN7SK chr6 52995620 52995950 + misc_RNA KNOWN NA 331 331 1 ENSG00000112144.14 ICK chr6 53001279 53061802 - protein_coding KNOWN OTTHUMG00000014870.1 60524 6259 29 ENSG00000112146.15 FBXO9 chr6 53051991 53100873 + protein_coding KNOWN OTTHUMG00000014869.7 48883 8164 87 ENSG00000242865.3 RN7SL244P chr6 53090961 53091257 + misc_RNA KNOWN NA 297 297 1 ENSG00000261745.2 RP11-506E9.3 chr6 53125644 53126146 - sense_overlapping NOVEL OTTHUMG00000175919.2 503 503 1 ENSG00000137270.10 GCM1 chr6 53126964 53148829 - protein_coding KNOWN OTTHUMG00000014871.1 21866 2765 6 ENSG00000253026.1 RNU6-464P chr6 53153795 53153898 - snRNA KNOWN NA 104 104 1 ENSG00000219074.1 SOD1P1 chr6 53196720 53197159 - processed_pseudogene KNOWN OTTHUMG00000014872.1 440 440 1 ENSG00000218713.1 RP1-34L19.1 chr6 53206598 53208697 - processed_pseudogene KNOWN OTTHUMG00000014873.1 2100 2100 1 ENSG00000226324.1 RP11-115M14.1 chr1 71367054 71367303 - processed_pseudogene KNOWN OTTHUMG00000009661.1 250 250 1 ENSG00000206908.1 RNU1-136P chr6 53219261 53219424 + snRNA KNOWN NA 164 164 1 ENSG00000219163.2 HMGB1P20 chr6 53235621 53236297 - processed_pseudogene KNOWN OTTHUMG00000014874.2 677 677 1 ENSG00000012660.12 ELOVL5 chr6 53267398 53349179 - protein_coding KNOWN OTTHUMG00000016249.1 81782 3813 46 ENSG00000264056.1 MIR5685 chr6 53276993 53277071 + miRNA KNOWN NA 79 79 1 ENSG00000217527.1 RPS16P5 chr6 53336943 53337346 - transcribed_processed_pseudogene KNOWN OTTHUMG00000014875.1 404 404 1 ENSG00000271367.1 RP3-483K16.4 chr6 53350158 53350705 + lincRNA NOVEL OTTHUMG00000185190.1 548 548 1 ENSG00000219863.5 RPL31P28 chr6 53354715 53355065 + processed_pseudogene KNOWN OTTHUMG00000016250.1 351 351 1 ENSG00000218049.1 RPL31P33 chr6 53368670 53369009 + processed_pseudogene KNOWN OTTHUMG00000014877.1 340 340 1 ENSG00000218261.1 RP11-96J19.1 chr6 53378503 53378861 + processed_pseudogene KNOWN OTTHUMG00000014876.2 359 359 1 ENSG00000271338.1 RP11-96J19.4 chr6 53381519 53382203 + processed_pseudogene KNOWN OTTHUMG00000184572.1 685 685 1 ENSG00000172260.12 NEGR1 chr1 71395940 72282734 - protein_coding KNOWN OTTHUMG00000009698.5 886795 13417 28 ENSG00000253010.1 RN7SKP256 chr6 53415294 53415607 - misc_RNA KNOWN NA 314 314 1 ENSG00000271373.1 NANOGP3 chr6 53418452 53418737 - processed_pseudogene KNOWN OTTHUMG00000184573.2 286 286 1 ENSG00000216072.2 AL591034.1 chr6 53456442 53456533 - miRNA NOVEL NA 92 92 1 ENSG00000001084.9 GCLC chr6 53497341 53616970 - protein_coding KNOWN OTTHUMG00000160220.5 119630 8463 86 ENSG00000249379.1 RP1-27K12.4 chr6 53503185 53506919 + antisense NOVEL OTTHUMG00000160263.1 3735 547 3 ENSG00000231683.5 RP1-27K12.2 chr6 53561289 53617171 - lincRNA NOVEL OTTHUMG00000014879.2 55883 3994 26 ENSG00000235899.1 LINC01564 chr6 53628380 53631394 + antisense NOVEL OTTHUMG00000014881.1 3015 566 3 ENSG00000124743.5 KLHL31 chr6 53647901 53665708 - protein_coding KNOWN OTTHUMG00000014882.1 17808 5743 5 ENSG00000275446.1 AL157773.1 chr6 53664170 53664312 + miRNA NOVEL NA 143 143 1 ENSG00000227885.1 RP11-79N23.1 chr6 53740749 53747022 - lincRNA NOVEL OTTHUMG00000014883.1 6274 850 3 ENSG00000231985.1 RP11-82L20.1 chr1 71570956 71573558 + antisense NOVEL OTTHUMG00000009734.1 2603 170 2 ENSG00000228614.1 RP13-476E20.1 chr6 53790875 53794274 - antisense NOVEL OTTHUMG00000014884.1 3400 483 3 ENSG00000137269.13 LRRC1 chr6 53794497 53924121 + protein_coding KNOWN OTTHUMG00000014885.4 129625 4897 32 ENSG00000271218.1 RP3-523E19.2 chr6 53918974 53920788 - antisense NOVEL OTTHUMG00000185145.1 1815 456 2 ENSG00000146147.13 MLIP chr6 53929982 54266280 + protein_coding KNOWN OTTHUMG00000014891.6 336299 7293 101 ENSG00000236740.5 RP11-411K7.1 chr6 53930022 53997667 + lincRNA NOVEL OTTHUMG00000014887.3 67646 3227 7 ENSG00000235050.5 MLIP-AS1 chr6 53978549 54079726 - antisense NOVEL OTTHUMG00000014889.5 101178 4032 49 ENSG00000236996.1 MLIP-IT1 chr6 53998890 54007152 + sense_intronic NOVEL OTTHUMG00000014890.1 8263 643 4 ENSG00000218143.2 ERHP2 chr6 54016479 54016777 - processed_pseudogene KNOWN OTTHUMG00000014888.2 299 299 1 ENSG00000137251.14 TINAG chr6 54307859 54390152 + protein_coding KNOWN OTTHUMG00000014893.1 82294 2155 26 ENSG00000228231.2 RP11-124I4.2 chr6 54365335 54369971 - antisense NOVEL OTTHUMG00000014892.2 4637 420 3 ENSG00000271618.1 RP11-175G14.2 chr1 71738173 71738354 + processed_pseudogene KNOWN OTTHUMG00000184293.1 182 182 1 ENSG00000213335.4 CLNS1AP1 chr6 54485169 54485850 - processed_pseudogene KNOWN OTTHUMG00000014894.2 682 682 1 ENSG00000216347.1 RP3-334F4.2 chr6 54602487 54603150 - processed_pseudogene KNOWN OTTHUMG00000014896.1 664 664 1 ENSG00000220773.1 RP3-334F4.1 chr6 54624605 54625488 + processed_pseudogene KNOWN OTTHUMG00000014895.1 884 884 1 ENSG00000220635.2 KRASP1 chr6 54770583 54771134 + processed_pseudogene KNOWN OTTHUMG00000014897.2 552 552 1 ENSG00000251946.1 RNU6-1023P chr6 54786387 54786492 + snRNA KNOWN NA 106 106 1 ENSG00000224984.1 RP11-524H19.2 chr6 54840118 54840855 - antisense NOVEL OTTHUMG00000014898.1 738 586 2 ENSG00000168143.8 FAM83B chr6 54846771 54942022 + protein_coding KNOWN OTTHUMG00000014899.1 95252 3167 5 ENSG00000261116.1 RP3-523K23.2 chr6 54943167 54945099 + sense_overlapping NOVEL OTTHUMG00000175921.1 1933 1933 1 ENSG00000137252.8 HCRTR2 chr6 55106460 55282620 + protein_coding KNOWN OTTHUMG00000016150.1 176161 1964 15 ENSG00000187871.2 GFRAL chr6 55327469 55402493 + protein_coding KNOWN OTTHUMG00000014900.2 75025 1911 9 ENSG00000116213.14 WRAP73 chr1 3630767 3652761 - protein_coding KNOWN OTTHUMG00000000612.4 21995 7604 60 ENSG00000228853.1 NEGR1-IT1 chr1 71794232 71837012 - sense_intronic NOVEL OTTHUMG00000009732.1 42781 534 3 ENSG00000146151.11 HMGCLL1 chr6 55434369 55579214 - protein_coding KNOWN OTTHUMG00000014902.4 144846 4800 60 ENSG00000220725.1 RP11-228O6.2 chr6 55680642 55681021 - processed_pseudogene KNOWN OTTHUMG00000014901.1 380 380 1 ENSG00000112175.7 BMP5 chr6 55753645 55875564 - protein_coding KNOWN OTTHUMG00000014903.1 121920 3952 7 ENSG00000214604.3 NPM1P36 chr6 55939790 55940624 - processed_pseudogene KNOWN OTTHUMG00000014904.1 835 835 1 ENSG00000124749.15 COL21A1 chr6 56056590 56394094 - protein_coding KNOWN OTTHUMG00000014907.4 337505 7078 150 ENSG00000219095.1 RP11-323I14__A.1 chr6 56276529 56276796 - processed_pseudogene KNOWN OTTHUMG00000014905.1 268 268 1 ENSG00000227602.1 RP3-445N2.1 chr6 56331788 56332117 - sense_intronic NOVEL OTTHUMG00000014906.1 330 330 1 ENSG00000220666.2 RCC2P7 chr6 56431950 56433213 - processed_pseudogene KNOWN OTTHUMG00000014908.2 1264 1264 1 ENSG00000266793.1 AL137008.1 chr6 56432379 56432442 - miRNA NOVEL NA 64 64 1 ENSG00000151914.16 DST chr6 56457987 56954628 - protein_coding KNOWN OTTHUMG00000014913.15 496642 41429 822 ENSG00000233994.2 GDI2P2 chr1 72274552 72275159 + processed_pseudogene KNOWN OTTHUMG00000009454.2 608 608 1 ENSG00000231441.1 RP11-472M19.2 chr6 56844002 56864078 + antisense NOVEL OTTHUMG00000014909.1 20077 551 4 ENSG00000216854.2 RPL17P26 chr6 56871191 56871743 + processed_pseudogene KNOWN OTTHUMG00000014910.2 553 553 1 ENSG00000200224.2 RNU6-626P chr6 56945730 56945836 + snRNA KNOWN NA 107 107 1 ENSG00000151917.16 BEND6 chr6 56955126 57027342 + protein_coding KNOWN OTTHUMG00000014914.6 72217 5588 21 ENSG00000219790.3 OSTCP6 chr6 56975606 56976062 - processed_pseudogene KNOWN OTTHUMG00000014911.3 457 457 1 ENSG00000218980.2 FTH1P15 chr6 57004520 57004799 + processed_pseudogene KNOWN OTTHUMG00000014912.2 280 280 1 ENSG00000276576.1 MRPL30P1 chr6 57029521 57029988 + processed_pseudogene KNOWN OTTHUMG00000187630.1 468 468 1 ENSG00000168116.12 KIAA1586 chr6 57046532 57055239 + protein_coding KNOWN OTTHUMG00000014915.1 8708 3109 11 ENSG00000112200.15 ZNF451 chr6 57086844 57170307 + protein_coding KNOWN OTTHUMG00000014916.9 83464 16416 114 ENSG00000226803.6 RP11-203B9.4 chr6 57114894 57174236 - antisense NOVEL OTTHUMG00000014917.4 59343 4918 74 ENSG00000227207.2 RPL31P12 chr1 72301472 72301829 + processed_pseudogene KNOWN OTTHUMG00000009455.2 358 358 1 ENSG00000112208.11 BAG2 chr6 57172326 57189833 + protein_coding KNOWN OTTHUMG00000014919.3 17508 6651 3 ENSG00000112210.10 RAB23 chr6 57186992 57222314 - protein_coding KNOWN OTTHUMG00000014918.2 35323 4926 14 ENSG00000146143.16 PRIM2 chr6 57314805 57646849 + protein_coding KNOWN OTTHUMG00000016190.6 332045 4667 41 ENSG00000212017.2 MIR548U chr6 57390132 57390212 + miRNA KNOWN NA 81 81 1 ENSG00000266579.1 RP1-71H19.2 chr6 57493855 57497691 + lincRNA NOVEL OTTHUMG00000178859.2 3837 345 2 ENSG00000281746.1 Clostridiales-1 chr6 57663854 57663967 - sRNA NOVEL NA 114 114 1 ENSG00000272541.1 XXbac-BPGBPG55C20.1 chr6 57855891 57856468 - lincRNA NOVEL OTTHUMG00000185765.1 578 578 1 ENSG00000271761.1 XXbac-BPGBPG55C20.3 chr6 57902609 57903148 - lincRNA NOVEL OTTHUMG00000185766.1 540 540 1 ENSG00000272316.1 XXbac-BPGBPG55C20.2 chr6 57908560 57913911 - lincRNA NOVEL OTTHUMG00000185767.1 5352 5352 1 ENSG00000239650.4 GUSBP4 chr6 57919784 57930291 - unprocessed_pseudogene KNOWN OTTHUMG00000014924.1 10508 672 5 ENSG00000212366.1 RNU6-1246P chr1 72717663 72717769 - snRNA KNOWN NA 107 107 1 ENSG00000218189.4 POM121L14P chr6 57937458 57939015 + processed_pseudogene KNOWN OTTHUMG00000014926.2 1558 1558 1 ENSG00000215190.7 LINC00680 chr6 57946074 57961501 - lincRNA KNOWN OTTHUMG00000014928.1 15428 2969 24 ENSG00000225096.1 XXbac-BPG55C20.7 chr6 57965630 57972218 + lincRNA NOVEL OTTHUMG00000014930.1 6589 301 3 ENSG00000214563.2 GAPDHP15 chr6 57967687 57968661 - processed_pseudogene KNOWN OTTHUMG00000014927.1 975 975 1 ENSG00000216687.2 RP11-278J20.2 chr6 58071720 58073134 - processed_pseudogene KNOWN OTTHUMG00000014932.2 1415 1415 1 ENSG00000214561.3 RBBP4P4 chr6 58119741 58121029 - processed_pseudogene KNOWN OTTHUMG00000014931.1 1289 1289 1 ENSG00000223633.2 RP11-143A22.1 chr6 58162610 58187582 + lincRNA NOVEL OTTHUMG00000014933.2 24973 497 2 ENSG00000275046.1 RP11-136G2.1 chr6 58386799 58386961 + processed_pseudogene KNOWN OTTHUMG00000187631.1 163 163 1 ENSG00000212065.3 AC244258.1 chr6 60291693 60291774 + miRNA NOVEL NA 82 82 1 ENSG00000280324.2 Clostridiales-1 chr6 60562547 60562700 - sRNA NOVEL NA 154 154 1 ENSG00000225087.1 RP4-660H19.1 chr1 72748921 72899140 - lincRNA NOVEL OTTHUMG00000009453.2 150220 499 5 ENSG00000281441.1 Clostridiales-1 chr6 60562705 60562788 + sRNA NOVEL NA 84 84 1 ENSG00000277172.1 RP11-343D24.1 chr6 60719222 60720196 - processed_pseudogene KNOWN OTTHUMG00000188334.1 975 975 1 ENSG00000275773.1 RP11-343D24.2 chr6 60723148 60723898 + lincRNA NOVEL OTTHUMG00000188335.1 751 315 2 ENSG00000274844.1 RP11-325M4.2 chr6 60826185 60826533 - processed_pseudogene KNOWN OTTHUMG00000188336.1 349 349 1 ENSG00000276290.1 RBBP4P3 chr6 60873360 60874642 - processed_pseudogene KNOWN OTTHUMG00000188337.1 1283 1283 1 ENSG00000221606.1 AL356131.1 chr6 61180832 61180944 - miRNA NOVEL NA 113 113 1 ENSG00000220030.1 RP1-91N13.1 chr6 61240898 61241311 + processed_pseudogene KNOWN OTTHUMG00000014934.1 414 414 1 ENSG00000255633.4 MTRNR2L9 chr6 61574103 61574629 + protein_coding KNOWN OTTHUMG00000177605.3 527 527 2 ENSG00000279892.1 AL356135.1 chr6 61585946 61587035 - protein_coding KNOWN NA 1090 33 2 ENSG00000250686.2 RP1-240B8.3 chr6 61630233 61681049 - 3prime_overlapping_ncrna NOVEL OTTHUMG00000014935.2 50817 673 6 ENSG00000227016.2 RP11-262K1.1 chr1 72765031 72780291 + lincRNA NOVEL OTTHUMG00000009452.3 15261 593 4 ENSG00000112232.8 KHDRBS2 chr6 61679960 62286227 - protein_coding KNOWN OTTHUMG00000014936.2 606268 2332 9 ENSG00000216859.1 RP11-448N11.1 chr6 62460940 62461503 - processed_pseudogene KNOWN OTTHUMG00000014937.2 564 564 1 ENSG00000217067.2 RP11-448N11.2 chr6 62547427 62548272 + unprocessed_pseudogene KNOWN OTTHUMG00000014938.2 846 392 2 ENSG00000262566.1 RP11-448N11.3 chr6 62611153 62611327 - processed_pseudogene KNOWN OTTHUMG00000177323.1 175 175 1 ENSG00000264206.2 AL589736.1 chr6 62683176 62683269 + miRNA NOVEL NA 94 94 1 ENSG00000264410.1 AL121931.1 chr6 62726835 62726924 - miRNA NOVEL NA 90 90 1 ENSG00000266682.1 AL590558.1 chr6 62983084 62983170 - miRNA NOVEL NA 87 87 1 ENSG00000217477.2 RP11-184C23.1 chr6 63193072 63193630 - processed_pseudogene KNOWN OTTHUMG00000014939.2 559 559 1 ENSG00000198225.5 FKBP1C chr6 63211446 63213024 + protein_coding KNOWN OTTHUMG00000014940.1 1579 1579 1 ENSG00000219940.2 SPTLC1P3 chr6 63227485 63227743 + processed_pseudogene KNOWN OTTHUMG00000014941.2 259 259 1 ENSG00000280317.1 RP11-25L19.1 chr1 72979014 72979314 - TEC KNOWN OTTHUMG00000175851.1 301 301 1 ENSG00000218520.5 RP11-184C23.4 chr6 63229087 63230110 - processed_pseudogene KNOWN OTTHUMG00000014942.2 1024 1024 1 ENSG00000146166.15 LGSN chr6 63275951 63319977 - protein_coding KNOWN OTTHUMG00000014946.4 44027 5823 19 ENSG00000218617.1 RP3-407E4.2 chr6 63392222 63392606 + processed_pseudogene KNOWN OTTHUMG00000014943.1 385 385 1 ENSG00000218274.2 RP3-407E4.3 chr6 63395007 63397106 - unprocessed_pseudogene KNOWN OTTHUMG00000014944.2 2100 1548 5 ENSG00000218048.2 RP3-407E4.4 chr6 63440766 63443580 + unprocessed_pseudogene KNOWN OTTHUMG00000014945.2 2815 968 3 ENSG00000225121.2 EEF1B2P5 chr6 63480134 63481876 + unprocessed_pseudogene KNOWN OTTHUMG00000014947.2 1743 548 2 ENSG00000112245.8 PTP4A1 chr6 63521761 63583587 + protein_coding KNOWN OTTHUMG00000014949.2 61827 5796 22 ENSG00000213312.3 RPL7AP34 chr6 63548708 63549508 - processed_pseudogene KNOWN OTTHUMG00000014948.1 801 801 1 ENSG00000266680.1 RP5-1148A21.3 chr6 63571005 63572408 - antisense NOVEL OTTHUMG00000179475.1 1404 1404 1 ENSG00000262651.1 RP11-164N20.2 chr6 63612761 63612903 - processed_pseudogene KNOWN OTTHUMG00000177325.1 143 143 1 ENSG00000229636.2 KRT8P21 chr1 73104792 73106282 + processed_pseudogene KNOWN OTTHUMG00000009547.2 1491 1491 1 ENSG00000213309.3 RPL9P18 chr6 63615827 63616361 - processed_pseudogene KNOWN OTTHUMG00000014950.1 535 535 1 ENSG00000118482.10 PHF3 chr6 63635820 63779336 + protein_coding KNOWN OTTHUMG00000014952.2 143517 10378 104 ENSG00000188107.12 EYS chr6 63719980 65707225 - protein_coding KNOWN OTTHUMG00000014971.10 1987246 17070 224 ENSG00000218813.1 RP11-59D5__B.3 chr6 63797189 63798031 + processed_pseudogene KNOWN OTTHUMG00000014955.1 843 843 1 ENSG00000236345.1 RP11-59D5__B.2 chr6 63806836 63822642 + antisense NOVEL OTTHUMG00000014954.1 15807 1454 2 ENSG00000219653.1 GCNT1P4 chr6 63857441 63857769 + processed_pseudogene KNOWN OTTHUMG00000014956.2 329 329 1 ENSG00000232120.1 RP11-349P19.1 chr6 64377795 64412779 + antisense NOVEL OTTHUMG00000014957.1 34985 525 4 ENSG00000217811.1 HNRNPDP2 chr6 64631205 64631682 - processed_pseudogene KNOWN OTTHUMG00000014959.1 478 478 1 ENSG00000243828.2 RP11-307F22.2 chr6 64728837 64733837 - transcribed_processed_pseudogene KNOWN OTTHUMG00000014961.2 5001 1041 5 ENSG00000221312.1 AL109922.1 chr6 64974393 64974492 + miRNA NOVEL NA 100 100 1 ENSG00000251825.1 RN7SKP19 chr1 73191604 73191855 - misc_RNA KNOWN NA 252 252 1 ENSG00000214558.4 RP11-74E24.2 chr6 65302522 65304957 + processed_pseudogene KNOWN OTTHUMG00000014968.1 2436 2436 1 ENSG00000274061.1 AL109612.1 chr6 65467000 65467096 + miRNA NOVEL NA 97 97 1 ENSG00000220483.4 SLC25A51P1 chr6 65788417 65789287 + processed_pseudogene KNOWN OTTHUMG00000014975.1 871 871 1 ENSG00000233859.2 ADH5P4 chr6 65836930 65838039 - processed_pseudogene KNOWN OTTHUMG00000014976.3 1110 1110 1 ENSG00000218890.1 NUFIP1P chr6 66093431 66094909 - processed_pseudogene KNOWN OTTHUMG00000014977.1 1479 1479 1 ENSG00000270521.1 RP11-24C14.1 chr6 66710242 66710827 - processed_pseudogene KNOWN OTTHUMG00000184588.2 586 586 1 ENSG00000238949.1 RNU7-66P chr6 66728843 66728904 - snRNA KNOWN NA 62 62 1 ENSG00000266073.1 AL590874.1 chr6 67149509 67149599 - miRNA NOVEL NA 91 91 1 ENSG00000212229.1 SNORD65 chr6 67210408 67210480 - snoRNA NOVEL NA 73 73 1 ENSG00000271111.1 RP11-409K15.1 chr6 67456346 67457250 - processed_pseudogene KNOWN OTTHUMG00000184586.1 905 905 1 ENSG00000233973.4 LINC01360 chr1 73306170 73355251 + lincRNA NOVEL OTTHUMG00000009566.1 49082 4632 15 ENSG00000251965.1 RNA5SP208 chr6 67467231 67467308 - rRNA KNOWN NA 78 78 1 ENSG00000201015.1 RNU6-280P chr6 67546651 67546754 + snRNA KNOWN NA 104 104 1 ENSG00000206672.1 Y_RNA chr6 67625356 67625464 + misc_RNA NOVEL NA 109 109 1 ENSG00000227706.3 RP11-301G19.1 chr6 67887646 67889339 - lincRNA NOVEL OTTHUMG00000184002.1 1694 1605 2 ENSG00000270509.1 RP11-301G19.2 chr6 67933485 67934682 + processed_pseudogene KNOWN OTTHUMG00000184409.1 1198 1198 1 ENSG00000223504.1 RP11-542F9.1 chr6 68055351 68060502 + lincRNA NOVEL OTTHUMG00000014978.1 5152 492 2 ENSG00000226497.1 RP11-406O16.1 chr6 68226972 68329899 - lincRNA NOVEL OTTHUMG00000014979.1 102928 674 4 ENSG00000278564.1 AL593844.1 chr6 68262189 68262278 - miRNA NOVEL NA 90 90 1 ENSG00000266675.1 AL606923.1 chr6 68493439 68493526 + miRNA NOVEL NA 88 88 1 ENSG00000218834.1 RP11-361F19.1 chr6 68598204 68598393 - processed_pseudogene KNOWN OTTHUMG00000014980.1 190 190 1 ENSG00000078900.13 TP73 chr1 3652520 3736201 + protein_coding KNOWN OTTHUMG00000000610.5 83682 6763 146 ENSG00000223479.3 RP4-788P17.1 chr1 73635216 73715214 + lincRNA NOVEL OTTHUMG00000009567.2 79999 819 5 ENSG00000230910.2 RP3-525N10.2 chr6 68629962 68635027 - antisense NOVEL OTTHUMG00000014981.2 5066 2948 6 ENSG00000135298.12 BAI3 chr6 68635367 69389511 + protein_coding KNOWN OTTHUMG00000014982.2 754145 6490 86 ENSG00000265498.1 AL158051.1 chr6 69214730 69214810 - miRNA NOVEL NA 81 81 1 ENSG00000265362.2 AL358133.1 chr6 69621381 69621472 + miRNA NOVEL NA 92 92 1 ENSG00000168216.9 LMBRD1 chr6 69675802 69797111 - protein_coding KNOWN OTTHUMG00000014985.3 121310 2402 47 ENSG00000219085.1 NPM1P37 chr6 69705287 69706160 - processed_pseudogene KNOWN OTTHUMG00000014983.1 874 874 1 ENSG00000219881.1 GAPDHP42 chr6 69745871 69746851 + processed_pseudogene KNOWN OTTHUMG00000014984.1 981 981 1 ENSG00000082293.11 COL19A1 chr6 69866571 70209976 + protein_coding KNOWN OTTHUMG00000014987.4 343406 8511 64 ENSG00000216365.2 RPL37P15 chr6 70098390 70098676 - processed_pseudogene KNOWN OTTHUMG00000014986.2 287 287 1 ENSG00000112280.14 COL9A1 chr6 70215061 70303083 - protein_coding KNOWN OTTHUMG00000014988.5 88023 7059 165 ENSG00000200601.1 RNA5SP50 chr1 73749517 73749623 - rRNA KNOWN NA 107 107 1 ENSG00000253809.1 RP1-149L1.1 chr6 70222758 70242156 + antisense NOVEL OTTHUMG00000163723.1 19399 254 2 ENSG00000237643.1 RP11-462G2.1 chr6 70394887 70399417 + lincRNA NOVEL OTTHUMG00000014989.1 4531 397 3 ENSG00000224349.2 RP11-462G2.2 chr6 70412828 70413950 - antisense NOVEL OTTHUMG00000014990.2 1123 349 2 ENSG00000082269.15 FAM135A chr6 70412941 70561174 + protein_coding KNOWN OTTHUMG00000014991.3 148234 10589 200 ENSG00000238386.1 RNU7-48P chr6 70513294 70513356 + snRNA KNOWN NA 63 63 1 ENSG00000154079.5 C6orf57 chr6 70566917 70589569 + protein_coding KNOWN OTTHUMG00000014992.1 22653 1440 5 ENSG00000271967.1 RP11-134K13.4 chr6 70596438 70596980 + lincRNA NOVEL OTTHUMG00000185770.1 543 543 1 ENSG00000232389.1 RP11-134K13.2 chr6 70608234 70609334 - processed_pseudogene KNOWN OTTHUMG00000014993.1 1101 1101 1 ENSG00000218870.1 SLC25A6P6 chr6 70663502 70664279 - processed_pseudogene KNOWN OTTHUMG00000014994.1 778 778 1 ENSG00000112305.13 SMAP1 chr6 70667776 70862015 + protein_coding KNOWN OTTHUMG00000014996.1 194240 4161 50 ENSG00000252005.2 RNU4ATAC8P chr1 73883714 73883822 + snRNA KNOWN NA 109 109 1 ENSG00000262803.1 RP11-160A9.3 chr6 70693839 70694619 + processed_pseudogene KNOWN OTTHUMG00000177328.2 781 781 1 ENSG00000217767.2 RP11-160A9.2 chr6 70734503 70734962 + processed_pseudogene KNOWN OTTHUMG00000014995.2 460 460 1 ENSG00000112309.9 B3GAT2 chr6 70856679 70957038 - protein_coding KNOWN OTTHUMG00000014997.2 100360 6565 8 ENSG00000219669.1 BECN1P2 chr6 71075564 71076375 + processed_pseudogene KNOWN OTTHUMG00000014998.1 812 812 1 ENSG00000221345.2 U3 chr6 71126893 71127105 - snoRNA NOVEL NA 213 213 1 ENSG00000218350.1 LYPLA1P3 chr6 71165076 71165770 + processed_pseudogene KNOWN OTTHUMG00000014999.1 695 695 1 ENSG00000207180.1 RNU6-411P chr6 71182612 71182718 + snRNA KNOWN NA 107 107 1 ENSG00000232295.6 RP11-154D6.1 chr6 71221457 71328228 - processed_transcript NOVEL OTTHUMG00000015003.5 106772 5169 123 ENSG00000276127.1 RP11-154D6.2 chr6 71251758 71252988 + processed_pseudogene KNOWN OTTHUMG00000187633.1 1231 1231 1 ENSG00000119900.7 OGFRL1 chr6 71288803 71308950 + protein_coding KNOWN OTTHUMG00000015000.2 20148 9051 10 ENSG00000162620.14 LRRIQ3 chr1 74026015 74198187 - protein_coding KNOWN OTTHUMG00000009508.4 172173 8759 47 ENSG00000269966.1 RP3-331H24.5 chr6 71295173 71417436 - lincRNA NOVEL OTTHUMG00000184051.1 122264 732 7 ENSG00000230597.1 RP3-331H24.4 chr6 71328942 71329806 + lincRNA NOVEL OTTHUMG00000015002.1 865 352 2 ENSG00000233237.5 LINC00472 chr6 71344344 71420769 - lincRNA KNOWN OTTHUMG00000015006.3 76426 3443 23 ENSG00000279312.1 RP3-331H24.7 chr6 71373253 71375387 - TEC KNOWN OTTHUMG00000184052.1 2135 2135 1 ENSG00000199094.2 MIR30C2 chr6 71376933 71377045 - miRNA KNOWN NA 113 113 1 ENSG00000279289.1 RP3-331H24.6 chr6 71386852 71390829 - TEC KNOWN OTTHUMG00000184053.1 3978 3978 1 ENSG00000207827.1 MIR30A chr6 71403551 71403621 - miRNA KNOWN NA 71 71 1 ENSG00000223765.2 RP1-288M22.2 chr6 71450834 71458874 + lincRNA NOVEL OTTHUMG00000015005.2 8041 452 4 ENSG00000212099.1 AL035467.1 chr6 71538884 71538976 - miRNA NOVEL NA 93 93 1 ENSG00000219575.1 RP1-288M22.1 chr6 71550958 71551643 - processed_pseudogene KNOWN OTTHUMG00000015004.2 686 686 1 ENSG00000254685.5 FPGT chr1 74198212 74234086 + protein_coding KNOWN OTTHUMG00000009571.6 35875 4180 35 ENSG00000218014.1 KRT19P1 chr6 71584721 71585906 + processed_pseudogene KNOWN OTTHUMG00000015007.1 1186 1186 1 ENSG00000211530.1 AL354933.1 chr6 71585089 71585201 + miRNA NOVEL NA 113 113 1 ENSG00000202069.1 RNU4-66P chr6 71652474 71652611 - snRNA KNOWN NA 138 138 1 ENSG00000079841.17 RIMS1 chr6 71886703 72403143 + protein_coding KNOWN OTTHUMG00000015009.10 516441 12788 416 ENSG00000218732.1 RP5-1046G13.2 chr6 72316599 72317436 - processed_pseudogene KNOWN OTTHUMG00000015008.1 838 838 1 ENSG00000217483.1 RP11-135M8__A.1 chr6 72522641 72523238 + processed_pseudogene KNOWN OTTHUMG00000015011.1 598 598 1 ENSG00000274037.1 FO393414.1 chr6 72538579 72538669 + miRNA NOVEL NA 91 91 1 ENSG00000181514.6 RP3-474G15.1 chr6 72598451 72599634 - processed_pseudogene KNOWN OTTHUMG00000015012.3 1184 1184 1 ENSG00000185760.14 KCNQ5 chr6 72621792 73198851 + protein_coding KNOWN OTTHUMG00000015020.7 577060 7570 143 ENSG00000233844.1 KCNQ5-IT1 chr6 72630495 72678558 + sense_intronic NOVEL OTTHUMG00000015014.2 48064 563 4 ENSG00000259030.5 FPGT-TNNI3K chr1 74198235 74543982 + protein_coding KNOWN OTTHUMG00000166281.4 345748 9358 86 ENSG00000266180.1 MIR4282 chr6 72967687 72967753 - miRNA KNOWN NA 67 67 1 ENSG00000232422.1 KNOP1P4 chr6 72986313 72987750 + processed_pseudogene KNOWN OTTHUMG00000015016.2 1438 1438 1 ENSG00000220515.2 PGAM1P10 chr6 73055097 73055857 + processed_pseudogene KNOWN OTTHUMG00000015017.2 761 761 1 ENSG00000229154.1 KCNQ5-AS1 chr6 73134803 73143514 - antisense NOVEL OTTHUMG00000015018.2 8712 1101 5 ENSG00000277026.1 AL365232.1 chr6 73150569 73150650 - miRNA NOVEL NA 82 82 1 ENSG00000234025.1 RBPMS2P1 chr6 73157517 73158139 - processed_pseudogene KNOWN OTTHUMG00000015019.3 623 623 1 ENSG00000251360.2 KHDC1P1 chr6 73209083 73210080 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000132475.2 998 508 3 ENSG00000243501.5 RP11-257K9.8 chr6 73209746 73263196 - protein_coding NOVEL OTTHUMG00000168294.2 53451 1636 8 ENSG00000256980.4 KHDC1L chr6 73223544 73225770 - protein_coding KNOWN OTTHUMG00000132474.1 2227 953 5 ENSG00000135314.11 KHDC1 chr6 73241314 73310365 - protein_coding KNOWN OTTHUMG00000015030.15 69052 3350 29 ENSG00000116783.13 TNNI3K chr1 74235401 74544428 + protein_coding KNOWN OTTHUMG00000171318.2 309028 4719 52 ENSG00000263378.1 AC019205.1 chr6 73263008 73263084 + miRNA NOVEL NA 77 77 1 ENSG00000229852.2 RP11-398K22.12 chr6 73263215 73301401 + antisense NOVEL OTTHUMG00000047278.4 38187 6660 8 ENSG00000239626.1 RPSAP41 chr6 73290403 73291262 + processed_pseudogene KNOWN OTTHUMG00000086817.1 860 860 1 ENSG00000234882.1 EIF3EP1 chr6 73291962 73293277 + processed_pseudogene KNOWN OTTHUMG00000015029.2 1316 1316 1 ENSG00000223389.1 SDCBP2P1 chr6 73322837 73323450 + processed_pseudogene KNOWN OTTHUMG00000015027.2 614 614 1 ENSG00000226840.1 PAICSP3 chr6 73327524 73329017 + processed_pseudogene KNOWN OTTHUMG00000015026.2 1494 1168 2 ENSG00000203909.3 DPPA5 chr6 73353062 73354295 - protein_coding KNOWN OTTHUMG00000015025.3 1234 679 3 ENSG00000203908.3 KHDC3L chr6 73362677 73364171 + protein_coding KNOWN OTTHUMG00000015024.3 1495 1018 3 ENSG00000203907.8 OOEP chr6 73368555 73395133 - protein_coding KNOWN OTTHUMG00000150057.3 26579 1467 9 ENSG00000231332.2 OOEP-AS1 chr6 73369704 73387717 + antisense NOVEL OTTHUMG00000015022.4 18014 463 2 ENSG00000237324.3 RP11-439H8.4 chr1 74341579 74378802 - antisense NOVEL OTTHUMG00000037897.3 37224 1408 6 ENSG00000235174.1 RPL39P3 chr6 73373108 73373263 - processed_pseudogene KNOWN OTTHUMG00000015023.2 156 156 1 ENSG00000224221.1 RPS6P8 chr6 73391038 73391767 - processed_pseudogene KNOWN OTTHUMG00000015021.2 730 730 1 ENSG00000080007.7 DDX43 chr6 73394748 73417569 + protein_coding KNOWN OTTHUMG00000015033.4 22822 2807 26 ENSG00000164430.14 MB21D1 chr6 73413515 73452276 - protein_coding KNOWN OTTHUMG00000015034.6 38762 4155 13 ENSG00000135297.14 MTO1 chr6 73461578 73509236 + protein_coding KNOWN OTTHUMG00000015032.16 47659 12071 132 ENSG00000207023.1 RNU6-975P chr6 73464073 73464177 + snRNA KNOWN NA 105 105 1 ENSG00000264609.1 AL603910.1 chr6 73477058 73477142 + miRNA NOVEL NA 85 85 1 ENSG00000271986.2 Metazoa_SRP chr6 73487590 73487877 - misc_RNA NOVEL NA 288 288 1 ENSG00000223821.1 RP11-505P4.6 chr6 73492025 73492742 - antisense NOVEL OTTHUMG00000058065.1 718 370 2 ENSG00000156508.16 EEF1A1 chr6 73515750 73523797 - protein_coding KNOWN OTTHUMG00000015031.5 8048 5948 65 ENSG00000233894.1 RP4-650F12.2 chr1 74468195 74469543 + antisense NOVEL OTTHUMG00000009610.1 1349 905 4 ENSG00000229862.4 RP11-505P4.7 chr6 73523618 73570596 + antisense NOVEL OTTHUMG00000150059.2 46979 804 7 ENSG00000223967.1 RP11-505P4.5 chr6 73526744 73526879 - processed_pseudogene KNOWN OTTHUMG00000015035.2 136 136 1 ENSG00000119899.12 SLC17A5 chr6 73593379 73654155 - protein_coding KNOWN OTTHUMG00000015039.1 60777 3604 16 ENSG00000218459.1 RPS27P15 chr6 73618346 73618597 + processed_pseudogene KNOWN OTTHUMG00000015037.1 252 252 1 ENSG00000231652.2 RP11-553A21.3 chr6 73693903 73696131 - antisense NOVEL OTTHUMG00000015038.2 2229 1973 2 ENSG00000156535.12 CD109 chr6 73695785 73828316 + protein_coding KNOWN OTTHUMG00000015040.4 132532 9563 101 ENSG00000279790.1 RP11-374N7.2 chr6 73971346 73973115 + TEC KNOWN OTTHUMG00000175922.1 1770 1770 1 ENSG00000217268.1 TXNP7 chr6 74004520 74004812 - processed_pseudogene KNOWN OTTHUMG00000015041.1 293 293 1 ENSG00000223786.1 RP11-554D15.1 chr6 74069451 74690727 + lincRNA NOVEL OTTHUMG00000015043.1 621277 669 4 ENSG00000217178.1 RP11-9G10.1 chr6 74282266 74282660 + processed_pseudogene KNOWN OTTHUMG00000015042.1 395 395 1 ENSG00000162621.6 LRRC53 chr1 74469878 74512614 - protein_coding KNOWN OTTHUMG00000009621.2 42737 3859 5 ENSG00000272243.4 RP11-554D15.3 chr6 74530248 74734279 - lincRNA NOVEL OTTHUMG00000185194.2 204032 1264 8 ENSG00000218483.1 RP11-554D15.2 chr6 74610449 74610715 - processed_pseudogene KNOWN OTTHUMG00000015044.1 267 267 1 ENSG00000224583.1 RP11-554D15.4 chr6 74642384 74652002 + lincRNA NOVEL OTTHUMG00000015045.1 9619 441 2 ENSG00000264884.1 AL590684.1 chr6 74719746 74719843 - miRNA NOVEL NA 98 98 1 ENSG00000219736.1 RP11-560O20.1 chr6 74849077 74850484 - processed_pseudogene KNOWN OTTHUMG00000015047.1 1408 1408 1 ENSG00000111799.19 COL12A1 chr6 75084326 75206051 - protein_coding KNOWN OTTHUMG00000015051.6 121726 12481 371 ENSG00000112695.10 COX7A2 chr6 75237675 75250323 - protein_coding KNOWN OTTHUMG00000015049.7 12649 1922 29 ENSG00000112697.14 TMEM30A chr6 75252924 75284968 - protein_coding KNOWN OTTHUMG00000015050.4 32045 5123 25 ENSG00000225793.2 RP1-234P15.4 chr6 75285014 75297003 + lincRNA NOVEL OTTHUMG00000015048.2 11990 1519 8 ENSG00000118407.13 FILIP1 chr6 75291859 75493738 - protein_coding KNOWN OTTHUMG00000015056.3 201880 8906 20 ENSG00000227232.5 WASH7P chr1 14404 29570 - unprocessed_pseudogene KNOWN OTTHUMG00000000958.1 15167 1351 11 ENSG00000279457.2 FO538757.2 chr1 184923 200322 - protein_coding KNOWN NA 15400 1982 36 ENSG00000227589.1 RP5-1092A11.5 chr1 3658938 3668772 - antisense NOVEL OTTHUMG00000041605.1 9835 754 3 ENSG00000178965.12 ERICH3 chr1 74568111 74673738 - protein_coding KNOWN OTTHUMG00000009622.5 105628 8779 34 ENSG00000203489.3 HMGB1P39 chr6 75319101 75319980 - processed_pseudogene KNOWN OTTHUMG00000015052.1 880 880 1 ENSG00000237174.6 RP11-415D17.3 chr6 75357214 75399300 + antisense NOVEL OTTHUMG00000015054.4 42087 2237 32 ENSG00000221332.2 U3 chr6 75398860 75399067 - snoRNA NOVEL NA 208 208 1 ENSG00000263533.1 MIR4463 chr6 75428407 75428473 + miRNA KNOWN NA 67 67 1 ENSG00000238156.1 RP11-415D17.4 chr6 75454944 75458900 + lincRNA NOVEL OTTHUMG00000015055.1 3957 461 4 ENSG00000217680.1 RP11-415D17.1 chr6 75465123 75465570 + processed_pseudogene KNOWN OTTHUMG00000015053.1 448 448 1 ENSG00000201291.1 RNU1-34P chr6 75473738 75473894 - snRNA KNOWN NA 157 157 1 ENSG00000219722.1 RPL26P20 chr6 75499705 75500136 + processed_pseudogene KNOWN OTTHUMG00000015057.1 432 432 1 ENSG00000220730.2 RP11-474L11.3 chr6 75586122 75586461 + processed_pseudogene KNOWN OTTHUMG00000015058.2 340 340 1 ENSG00000252137.1 RNU6-1338P chr6 75593055 75593145 + snRNA KNOWN NA 91 91 1 ENSG00000234497.4 ERICH3-AS1 chr1 74577430 74626098 + antisense NOVEL OTTHUMG00000037896.2 48669 5371 8 ENSG00000112701.16 SENP6 chr6 75601509 75718278 + protein_coding KNOWN OTTHUMG00000015060.3 116770 11414 118 ENSG00000217488.2 RP11-474L11.5 chr6 75610958 75611945 - transcribed_processed_pseudogene KNOWN OTTHUMG00000015059.2 988 988 2 ENSG00000252498.1 RNU6-1016P chr6 75644084 75644177 + snRNA KNOWN NA 94 94 1 ENSG00000200091.1 RN7SKP163 chr6 75654970 75655299 - misc_RNA KNOWN NA 330 330 1 ENSG00000196586.12 MYO6 chr6 75749192 75919537 + protein_coding KNOWN OTTHUMG00000015061.3 170346 8785 216 ENSG00000252156.1 RNU6-155P chr6 75768059 75768158 - snRNA KNOWN NA 100 100 1 ENSG00000223169.1 RNA5SP209 chr6 75865239 75865335 - rRNA KNOWN NA 97 97 1 ENSG00000112706.10 IMPG1 chr6 75921115 76072678 - protein_coding KNOWN OTTHUMG00000015063.1 151564 3801 43 ENSG00000200040.1 Y_RNA chr6 75928513 75928625 + misc_RNA NOVEL NA 113 113 1 ENSG00000222652.1 RNU6-248P chr6 76092834 76092940 + snRNA KNOWN NA 107 107 1 ENSG00000272864.1 RP11-17E13.2 chr1 74698769 74699333 - lincRNA NOVEL OTTHUMG00000186134.1 565 565 1 ENSG00000238697.1 RNU6-261P chr6 76446988 76447089 - snRNA KNOWN NA 102 102 1 ENSG00000236635.2 RP11-35J1.1 chr6 76522451 76593623 - lincRNA NOVEL OTTHUMG00000015064.2 71173 570 3 ENSG00000272445.1 U6 chr6 76557653 76557754 - snRNA NOVEL NA 102 102 1 ENSG00000280511.1 RP11-35J1.2 chr6 76561328 76562590 + lincRNA NOVEL OTTHUMG00000189754.1 1263 627 2 ENSG00000231762.1 RP11-354K4.1 chr6 76660486 76662770 + processed_pseudogene KNOWN OTTHUMG00000015065.1 2285 2285 1 ENSG00000271945.1 RP11-354K4.2 chr6 76774983 76775860 + lincRNA NOVEL OTTHUMG00000185778.1 878 786 2 ENSG00000276064.1 RP11-274E6.1 chr6 77343557 77343654 + processed_pseudogene KNOWN OTTHUMG00000187634.1 98 98 1 ENSG00000135312.5 HTR1B chr6 77462205 77463464 - protein_coding KNOWN OTTHUMG00000015066.1 1260 1260 1 ENSG00000219253.1 RPS6P7 chr6 77496119 77496671 + processed_pseudogene KNOWN OTTHUMG00000015067.1 553 553 1 ENSG00000269964.2 MEI4 chr6 77690658 77926974 + protein_coding NOVEL OTTHUMG00000153472.2 236317 4800 4 ENSG00000116791.12 CRYZ chr1 74705482 74733408 - protein_coding KNOWN OTTHUMG00000009620.4 27927 4085 50 ENSG00000230309.1 RP3-390M24.1 chr6 78604467 78606036 - lincRNA NOVEL OTTHUMG00000015068.1 1570 387 2 ENSG00000229495.1 RP11-173D14.3 chr6 78809715 78813303 - lincRNA NOVEL OTTHUMG00000015069.1 3589 2632 2 ENSG00000146243.12 IRAK1BP1 chr6 78867472 78946440 + protein_coding NOVEL OTTHUMG00000015070.2 78969 7542 16 ENSG00000275100.1 AL450327.1 chr6 78909249 78909312 - miRNA NOVEL NA 64 64 1 ENSG00000146247.13 PHIP chr6 78935867 79078236 - protein_coding KNOWN OTTHUMG00000015071.2 142370 13252 57 ENSG00000217512.1 RP11-477E3.2 chr6 79067692 79068138 - processed_pseudogene KNOWN OTTHUMG00000015072.1 447 447 1 ENSG00000118418.13 HMGN3 chr6 79201245 79234738 - protein_coding KNOWN OTTHUMG00000015073.1 33494 1014 19 ENSG00000270362.1 HMGN3-AS1 chr6 79233718 79236797 + antisense NOVEL OTTHUMG00000185118.1 3080 2946 2 ENSG00000220154.2 RP11-46B11.2 chr6 79278105 79278427 - processed_pseudogene KNOWN OTTHUMG00000015074.2 323 323 1 ENSG00000201464.1 Y_RNA chr6 79301963 79302066 - misc_RNA NOVEL NA 104 104 1 ENSG00000162623.14 TYW3 chr1 74733152 74766678 + protein_coding KNOWN OTTHUMG00000009641.4 33527 4616 34 ENSG00000217786.1 RP3-508D13.1 chr6 79326568 79327207 - processed_pseudogene KNOWN OTTHUMG00000015076.1 640 640 1 ENSG00000218029.3 RP1-232L24.2 chr6 79354443 79354713 - processed_pseudogene KNOWN OTTHUMG00000015078.1 271 271 1 ENSG00000262048.1 RP1-232L24.4 chr6 79406240 79406774 - processed_pseudogene KNOWN OTTHUMG00000177330.1 535 535 1 ENSG00000231533.1 RP1-232L24.3 chr6 79420297 79421305 + lincRNA NOVEL OTTHUMG00000015079.1 1009 474 3 ENSG00000218748.1 DBIP1 chr6 79436908 79437167 - processed_pseudogene KNOWN OTTHUMG00000015077.1 260 260 1 ENSG00000135338.12 LCA5 chr6 79484991 79537458 - protein_coding KNOWN OTTHUMG00000015080.5 52468 5964 24 ENSG00000261970.1 RP11-342L8.2 chr6 79552794 79553160 + processed_pseudogene KNOWN OTTHUMG00000177331.1 367 367 1 ENSG00000272137.1 RP11-177G23.2 chr6 79561132 79561602 + lincRNA NOVEL OTTHUMG00000185791.1 471 471 1 ENSG00000279659.1 RP11-177G23.1 chr6 79573877 79575530 + TEC KNOWN OTTHUMG00000175923.1 1654 1654 1 ENSG00000198478.7 SH3BGRL2 chr6 79631283 79703659 + protein_coding KNOWN OTTHUMG00000015081.2 72377 4653 4 ENSG00000229943.1 RP11-93N20.1 chr1 74963314 74965118 + lincRNA NOVEL OTTHUMG00000042097.1 1805 339 2 ENSG00000235357.1 RP1-159G19.1 chr6 79803583 79807225 - lincRNA NOVEL OTTHUMG00000015082.1 3643 481 3 ENSG00000221470.1 AL132875.1 chr6 79826793 79826885 - miRNA NOVEL NA 93 93 1 ENSG00000220918.1 RP1-92C4.1 chr6 79854684 79855632 + processed_pseudogene KNOWN OTTHUMG00000015083.2 949 949 1 ENSG00000233835.1 RP1-92C4.2 chr6 79871873 79874610 + lincRNA NOVEL OTTHUMG00000015084.1 2738 325 2 ENSG00000118402.5 ELOVL4 chr6 79914812 79947580 - protein_coding KNOWN OTTHUMG00000015087.1 32769 3042 6 ENSG00000218582.2 GAPDHP63 chr6 79953005 79954011 - processed_pseudogene KNOWN OTTHUMG00000015085.2 1007 1007 1 ENSG00000220311.1 RPL35AP18 chr6 79964215 79964519 + processed_pseudogene KNOWN OTTHUMG00000015086.1 305 305 1 ENSG00000281602.1 AL133475.1 chr6 80001402 80001907 - protein_coding NOVEL NA 506 99 3 ENSG00000112742.8 TTK chr6 80003887 80042527 + protein_coding KNOWN OTTHUMG00000015088.3 38641 4579 99 ENSG00000218418.2 RP11-296E7.1 chr6 80064286 80070199 - processed_pseudogene KNOWN OTTHUMG00000015089.2 5914 5914 1 ENSG00000261213.1 RP11-510C10.4 chr1 75122518 75123927 - lincRNA NOVEL OTTHUMG00000175853.1 1410 1410 1 ENSG00000217377.1 AK4P5 chr6 80077729 80078362 - processed_pseudogene KNOWN OTTHUMG00000015090.1 634 634 1 ENSG00000083123.13 BCKDHB chr6 80106647 80346270 + protein_coding KNOWN OTTHUMG00000016430.2 239624 4071 36 ENSG00000272129.1 RP11-250B2.6 chr6 80355424 80356859 + lincRNA NOVEL OTTHUMG00000185792.1 1436 1436 1 ENSG00000219547.1 RPL17P25 chr6 80374015 80374569 - processed_pseudogene KNOWN OTTHUMG00000015091.1 555 555 1 ENSG00000279022.1 RP11-250B2.4 chr6 80440730 80441172 + TEC KNOWN OTTHUMG00000175924.1 443 443 1 ENSG00000233967.5 RP11-250B2.3 chr6 80443344 80465927 + lincRNA NOVEL OTTHUMG00000015092.2 22584 935 11 ENSG00000260645.1 RP11-250B2.5 chr6 80466958 80469080 + lincRNA NOVEL OTTHUMG00000175925.1 2123 2123 1 ENSG00000219361.1 RP11-250B2.2 chr6 80470071 80470428 - processed_pseudogene KNOWN OTTHUMG00000015093.1 358 358 1 ENSG00000181705.2 RP11-11L12.2 chr6 80499196 80499392 - processed_pseudogene KNOWN OTTHUMG00000015094.1 197 197 1 ENSG00000216352.1 RP11-486E2.1 chr6 80555841 80557189 - processed_pseudogene KNOWN OTTHUMG00000015095.1 1349 1349 1 ENSG00000224127.1 RP11-510C10.2 chr1 75127830 75133058 - antisense NOVEL OTTHUMG00000009693.1 5229 670 2 ENSG00000112773.14 FAM46A chr6 81491439 81752774 - protein_coding KNOWN OTTHUMG00000015097.1 261336 6053 14 ENSG00000226089.2 RP1-300G12.2 chr6 81527102 81534915 - sense_intronic NOVEL OTTHUMG00000015096.2 7814 786 5 ENSG00000277797.1 RP11-244G12.1 chr6 81551686 81554092 + lincRNA NOVEL OTTHUMG00000187096.1 2407 2407 1 ENSG00000212336.1 RNA5SP210 chr6 81622200 81622319 + rRNA KNOWN NA 120 120 1 ENSG00000232031.1 RP5-991C6.4 chr6 81724722 81736353 - sense_intronic NOVEL OTTHUMG00000015100.1 11632 471 4 ENSG00000206886.1 SNORA70 chr6 81764024 81764156 + snoRNA NOVEL NA 133 133 1 ENSG00000219702.1 RP5-991C6.2 chr6 81764211 81764503 + processed_pseudogene KNOWN OTTHUMG00000015098.1 293 293 1 ENSG00000224995.1 LINC01526 chr6 81813286 81814157 - lincRNA NOVEL OTTHUMG00000015099.1 872 520 2 ENSG00000226453.1 RP11-379B8.1 chr6 81845185 81933480 - lincRNA NOVEL OTTHUMG00000015101.1 88296 822 3 ENSG00000281694.1 AL360157.1 chr6 81950224 81950338 - miRNA NOVEL NA 115 115 1 ENSG00000162624.13 LHX8 chr1 75128434 75161533 + protein_coding KNOWN OTTHUMG00000009692.3 33100 3977 20 ENSG00000260574.1 RP11-801I18.1 chr6 81969453 81969539 - lincRNA NOVEL OTTHUMG00000175926.1 87 87 1 ENSG00000005700.13 IBTK chr6 82169983 82247754 - protein_coding KNOWN OTTHUMG00000015102.2 77772 8722 213 ENSG00000223044.1 RNU6-130P chr6 82210338 82210440 - snRNA KNOWN NA 103 103 1 ENSG00000220537.1 RP3-492P14.2 chr6 82263996 82264974 - processed_pseudogene KNOWN OTTHUMG00000015104.1 979 979 1 ENSG00000146242.7 TPBG chr6 82363206 82370828 + protein_coding KNOWN OTTHUMG00000015103.1 7623 6904 7 ENSG00000118420.15 UBE3D chr6 82892398 83065841 - protein_coding KNOWN OTTHUMG00000015108.7 173444 6394 59 ENSG00000220091.2 LAP3P1 chr6 82924829 82925122 - processed_pseudogene KNOWN OTTHUMG00000015105.2 294 294 1 ENSG00000227215.1 RP11-445L13__B.3 chr6 82932601 82938677 + antisense NOVEL OTTHUMG00000015106.1 6077 480 2 ENSG00000083097.13 DOPEY1 chr6 83067666 83171350 + protein_coding KNOWN OTTHUMG00000016365.3 103685 10045 148 ENSG00000281446.1 AL139333.1 chr6 83072973 83073135 + protein_coding NOVEL NA 163 54 2 ENSG00000224149.1 RP11-510C10.3 chr1 75129974 75132576 - antisense NOVEL OTTHUMG00000009694.1 2603 2203 2 ENSG00000013375.14 PGM3 chr6 83161150 83193936 - protein_coding KNOWN OTTHUMG00000015110.6 32787 7335 102 ENSG00000013392.7 RWDD2A chr6 83193379 83198932 + protein_coding KNOWN OTTHUMG00000015109.2 5554 3744 3 ENSG00000065833.8 ME1 chr6 83210389 83431071 - protein_coding KNOWN OTTHUMG00000015111.2 220683 3371 14 ENSG00000252309.1 AL391416.1 chr6 83367706 83367791 + miRNA NOVEL NA 86 86 1 ENSG00000219951.4 RP11-378G13.2 chr6 83392416 83393409 + processed_pseudogene KNOWN OTTHUMG00000015112.2 994 994 1 ENSG00000146250.6 PRSS35 chr6 83512538 83525704 + protein_coding KNOWN OTTHUMG00000015113.1 13167 2440 2 ENSG00000065609.13 SNAP91 chr6 83552880 83709691 - protein_coding KNOWN OTTHUMG00000015114.9 156812 6651 331 ENSG00000237874.2 RP3-393K13.1 chr6 83728055 83736525 + lincRNA NOVEL OTTHUMG00000015116.2 8471 351 2 ENSG00000203877.6 RIPPLY2 chr6 83853266 83857515 + protein_coding KNOWN OTTHUMG00000015117.1 4250 767 7 ENSG00000065615.12 CYB5R4 chr6 83859643 83967424 + protein_coding KNOWN OTTHUMG00000015118.5 107782 9635 28 ENSG00000235131.1 RP5-1092A11.2 chr1 3712200 3714298 - antisense NOVEL OTTHUMG00000003412.1 2099 351 2 ENSG00000274200.1 AC118550.1 chr1 75182616 75182709 + miRNA NOVEL NA 94 94 1 ENSG00000228679.1 RP4-676J13.2 chr6 83983728 84007323 + lincRNA NOVEL OTTHUMG00000015119.1 23596 835 4 ENSG00000230852.1 RP11-51G5.1 chr6 84023055 84024553 + lincRNA NOVEL OTTHUMG00000015120.1 1499 340 2 ENSG00000135324.5 MRAP2 chr6 84033756 84090881 + protein_coding KNOWN OTTHUMG00000015121.1 57126 2153 4 ENSG00000135315.10 CEP162 chr6 84124241 84227635 - protein_coding KNOWN OTTHUMG00000015123.2 103395 5474 125 ENSG00000231776.4 RP1-90L14.1 chr6 84421028 84556152 - lincRNA NOVEL OTTHUMG00000015125.1 135125 741 11 ENSG00000226309.1 SMARCE1P2 chr6 84429584 84430802 - processed_pseudogene KNOWN OTTHUMG00000015124.1 1219 1219 1 ENSG00000112837.15 TBX18 chr6 84687351 84764519 - protein_coding KNOWN OTTHUMG00000015129.3 77169 8469 36 ENSG00000228290.5 RP11-132M7.3 chr6 84687712 84709578 + antisense NOVEL OTTHUMG00000015128.4 21867 2076 35 ENSG00000219604.1 RP11-132M7.2 chr6 84689292 84689429 - processed_pseudogene KNOWN OTTHUMG00000015127.1 138 138 1 ENSG00000216523.1 RP3-435K13.1 chr6 84966397 84966625 - processed_pseudogene KNOWN OTTHUMG00000015130.1 229 229 1 ENSG00000206999.1 RNU6-622P chr1 75183045 75183147 + snRNA KNOWN NA 103 103 1 ENSG00000220291.1 RP3-455E7.1 chr6 85155667 85167749 + unprocessed_pseudogene KNOWN OTTHUMG00000015131.1 12083 1002 6 ENSG00000216902.3 RP1-161C16.1 chr6 85257328 85257694 + processed_pseudogene KNOWN OTTHUMG00000015132.1 367 367 1 ENSG00000217060.1 RP11-30P6.1 chr6 85286076 85290849 + unprocessed_pseudogene KNOWN OTTHUMG00000015133.1 4774 1590 5 ENSG00000213211.2 KRT18P64 chr6 85287789 85289007 + processed_pseudogene KNOWN OTTHUMG00000015134.1 1219 1219 1 ENSG00000234155.1 RP11-30P6.6 chr6 85387219 85390186 - lincRNA NOVEL OTTHUMG00000015137.1 2968 2513 2 ENSG00000216439.1 DUTP5 chr6 85426657 85427125 - processed_pseudogene KNOWN OTTHUMG00000015136.1 469 469 1 ENSG00000214460.3 TPT1P6 chr6 85427453 85427966 - processed_pseudogene KNOWN OTTHUMG00000015135.1 514 514 1 ENSG00000135318.10 NT5E chr6 85449584 85495791 + protein_coding KNOWN OTTHUMG00000015139.1 46208 4533 30 ENSG00000280232.1 RP11-321N4.4 chr6 85498441 85499058 - TEC KNOWN OTTHUMG00000175927.1 618 618 1 ENSG00000135317.11 SNX14 chr6 85505496 85594156 - protein_coding KNOWN OTTHUMG00000015140.5 88661 7105 291 ENSG00000137968.15 SLC44A5 chr1 75202131 75611116 - protein_coding KNOWN OTTHUMG00000009721.3 408986 6299 58 ENSG00000271793.1 RP11-321N4.5 chr6 85557978 85615234 - protein_coding NOVEL OTTHUMG00000185329.1 57257 835 8 ENSG00000135316.16 SYNCRIP chr6 85607785 85643792 - protein_coding KNOWN OTTHUMG00000015141.3 36008 8205 40 ENSG00000220563.1 PKMP3 chr6 85659892 85660606 - processed_pseudogene KNOWN OTTHUMG00000015143.1 715 715 1 ENSG00000203875.9 SNHG5 chr6 85660950 85678736 - processed_transcript KNOWN OTTHUMG00000015144.5 17787 2794 90 ENSG00000281147.1 SNORD50A chr6 85677294 85677368 - snoRNA KNOWN NA 75 75 1 ENSG00000275072.1 SNORD50B chr6 85677589 85677658 - snoRNA KNOWN NA 70 70 1 ENSG00000217334.1 RP11-33E24.3 chr6 85731371 85732011 + processed_pseudogene KNOWN OTTHUMG00000015145.1 641 641 1 ENSG00000198738.4 SMIM11P1 chr6 85735744 85735921 - processed_pseudogene KNOWN OTTHUMG00000015146.2 178 178 1 ENSG00000222686.1 RNU4-72P chr6 85751581 85751753 + snRNA KNOWN NA 173 173 1 ENSG00000200427.1 Y_RNA chr6 85777639 85777755 - misc_RNA NOVEL NA 117 117 1 ENSG00000224493.1 RP11-87O11.1 chr1 75521562 75522231 + processed_pseudogene KNOWN OTTHUMG00000009789.1 670 670 1 ENSG00000218766.1 RP11-207F8.1 chr6 85868953 85869464 + processed_pseudogene KNOWN OTTHUMG00000015147.1 512 512 1 ENSG00000202103.1 RNU4-12P chr6 85993021 85993159 - snRNA KNOWN NA 139 139 1 ENSG00000220069.1 RPL7P27 chr6 86086415 86087134 - processed_pseudogene KNOWN OTTHUMG00000015148.1 720 720 1 ENSG00000217272.1 RP1-263J7.2 chr6 86170447 86171018 - processed_pseudogene KNOWN OTTHUMG00000015149.1 572 572 1 ENSG00000220831.4 NDUFA5P9 chr6 86214237 86214576 - processed_pseudogene KNOWN OTTHUMG00000015150.2 340 340 1 ENSG00000219500.1 RP11-15J23.1 chr6 86432244 86432669 + processed_pseudogene KNOWN OTTHUMG00000015151.1 426 426 1 ENSG00000243124.3 RN7SL643P chr6 86435848 86436138 + misc_RNA KNOWN NA 291 291 1 ENSG00000218561.1 RP1-253B10.1 chr6 86729708 86730108 - processed_pseudogene KNOWN OTTHUMG00000015152.2 401 401 1 ENSG00000219190.1 RP1-253B10.2 chr6 86768522 86768932 - processed_pseudogene KNOWN OTTHUMG00000015153.2 411 411 1 ENSG00000217769.4 RP11-76H14.2 chr6 86897118 86897421 + processed_pseudogene KNOWN OTTHUMG00000015156.1 304 304 1 ENSG00000252338.1 RNU6-503P chr1 75538015 75538119 - snRNA KNOWN NA 105 105 1 ENSG00000220240.1 RP11-76H14.5 chr6 86897547 86897683 + unprocessed_pseudogene KNOWN OTTHUMG00000015159.1 137 137 1 ENSG00000168830.7 HTR1E chr6 86937306 87016683 + protein_coding KNOWN OTTHUMG00000015154.5 79378 2052 2 ENSG00000214457.3 RPL7P29 chr6 86970466 86971193 + processed_pseudogene KNOWN OTTHUMG00000015157.1 728 728 1 ENSG00000217169.2 MTHFD2P2 chr6 87000045 87000291 - processed_pseudogene KNOWN OTTHUMG00000015158.3 247 247 1 ENSG00000217776.1 RP11-156F23.2 chr6 87070156 87070461 - processed_pseudogene KNOWN OTTHUMG00000015160.1 306 306 1 ENSG00000252697.1 RN7SKP209 chr6 87083233 87083536 + misc_RNA KNOWN NA 304 304 1 ENSG00000135346.7 CGA chr6 87085498 87095406 - protein_coding KNOWN OTTHUMG00000015161.3 9909 2284 23 ENSG00000215477.2 RCN1P1 chr6 87121693 87122688 - processed_pseudogene KNOWN OTTHUMG00000015162.1 996 996 1 ENSG00000272008.1 RP11-393I2.4 chr6 87151159 87155285 - antisense NOVEL OTTHUMG00000185794.1 4127 4127 1 ENSG00000188994.11 ZNF292 chr6 87152833 87264196 + protein_coding KNOWN OTTHUMG00000015164.5 111364 13128 46 ENSG00000213579.3 RP4-595K12.1 chr1 75582099 75582555 + processed_pseudogene KNOWN OTTHUMG00000009792.1 457 457 1 ENSG00000218313.1 RP11-393I2.2 chr6 87173368 87174303 - processed_pseudogene KNOWN OTTHUMG00000015163.2 936 936 1 ENSG00000164411.9 GJB7 chr6 87282978 87329278 - protein_coding KNOWN OTTHUMG00000015166.3 46301 2763 10 ENSG00000216990.2 HSPD1P10 chr6 87298772 87300447 + processed_pseudogene KNOWN OTTHUMG00000015167.2 1676 1676 1 ENSG00000111850.9 SMIM8 chr6 87322583 87399749 + protein_coding KNOWN OTTHUMG00000015168.6 77167 8749 35 ENSG00000203872.6 C6orf163 chr6 87344849 87365463 + protein_coding KNOWN OTTHUMG00000015169.3 20615 2884 12 ENSG00000279616.1 RP1-102H19.7 chr6 87356831 87358605 + TEC KNOWN OTTHUMG00000186244.1 1775 1775 1 ENSG00000272514.4 C6orf165 chr6 87407983 87464465 + protein_coding KNOWN OTTHUMG00000015173.2 56483 3613 44 ENSG00000213204.7 C6orf165 chr6 87408012 87511634 + protein_coding NOVEL OTTHUMG00000185391.1 103623 3530 31 ENSG00000216324.1 RP3-382I10.2 chr6 87425795 87426088 - processed_pseudogene KNOWN OTTHUMG00000015174.1 294 294 1 ENSG00000218793.1 RP3-382I10.3 chr6 87441165 87442146 - processed_pseudogene KNOWN OTTHUMG00000015175.1 982 982 1 ENSG00000230863.2 RP4-595K12.2 chr1 75641346 75642087 - processed_pseudogene KNOWN OTTHUMG00000057567.2 742 742 1 ENSG00000218698.1 ST13P16 chr6 87444395 87445175 - processed_pseudogene KNOWN OTTHUMG00000015176.1 781 781 1 ENSG00000164414.15 SLC35A1 chr6 87470623 87512336 + protein_coding KNOWN OTTHUMG00000015177.1 41714 1994 42 ENSG00000206715.1 RNU6-444P chr6 87488445 87488552 + snRNA KNOWN NA 108 108 1 ENSG00000146282.16 RARS2 chr6 87514378 87590003 - protein_coding KNOWN OTTHUMG00000015178.3 75626 2545 33 ENSG00000135336.13 ORC3 chr6 87590067 87667453 + protein_coding KNOWN OTTHUMG00000015179.4 77387 3689 67 ENSG00000135334.8 AKIRIN2 chr6 87675072 87702209 - protein_coding KNOWN OTTHUMG00000015180.2 27138 1999 7 ENSG00000238628.1 snoU13 chr6 87720915 87721018 + snoRNA NOVEL NA 104 104 1 ENSG00000207131.1 Y_RNA chr6 87826173 87826285 - misc_RNA NOVEL NA 113 113 1 ENSG00000240997.3 RN7SL183P chr6 87845650 87845947 + misc_RNA KNOWN NA 298 298 1 ENSG00000265585.2 AL138919.1 chr6 87847542 87847638 + miRNA NOVEL NA 97 97 1 ENSG00000178193.5 RP4-682C21.5 chr1 75710003 75724011 - antisense NOVEL OTTHUMG00000037911.2 14009 806 4 ENSG00000271114.1 RP11-453D21.1 chr6 87891424 87891869 + processed_pseudogene KNOWN OTTHUMG00000184532.1 446 446 1 ENSG00000118434.7 SPACA1 chr6 88047789 88066832 + protein_coding KNOWN OTTHUMG00000015183.1 19044 1710 13 ENSG00000118432.12 CNR1 chr6 88139864 88166359 - protein_coding KNOWN OTTHUMG00000015184.3 26496 6357 15 ENSG00000279565.1 RP4-570O12.3 chr6 88172261 88175762 + TEC KNOWN OTTHUMG00000175928.1 3502 3502 1 ENSG00000220131.1 RP4-570O12.2 chr6 88265158 88265511 + processed_pseudogene KNOWN OTTHUMG00000015185.1 354 354 1 ENSG00000220267.1 ACTBP8 chr6 88275882 88276989 - processed_pseudogene KNOWN OTTHUMG00000015186.1 1108 1108 1 ENSG00000281199.1 AL139042.1 chr6 88276125 88276208 - miRNA NOVEL NA 84 84 1 ENSG00000234426.1 RP11-459O1.2 chr6 88298950 88421033 - lincRNA NOVEL OTTHUMG00000015187.1 122084 305 3 ENSG00000111880.14 RNGTT chr6 88610272 88963721 - protein_coding KNOWN OTTHUMG00000015190.3 353450 4916 57 ENSG00000222145.1 SNORA73 chr6 88714242 88714430 - snoRNA NOVEL NA 189 189 1 ENSG00000117054.12 ACADM chr1 75724347 75787575 + protein_coding KNOWN OTTHUMG00000009784.3 63229 4783 141 ENSG00000280277.1 RP1-72A23.4 chr6 88964527 88966587 + TEC KNOWN OTTHUMG00000187097.1 2061 2061 1 ENSG00000220130.1 RP1-72A23.3 chr6 89001548 89001814 + processed_pseudogene KNOWN OTTHUMG00000015189.1 267 267 1 ENSG00000220960.1 RP1-72A23.1 chr6 89059628 89060109 + processed_pseudogene KNOWN OTTHUMG00000015188.1 482 482 1 ENSG00000223001.1 RNU2-61P chr6 89063500 89063690 - snRNA KNOWN NA 191 191 1 ENSG00000271931.1 RP11-63L7.5 chr6 89080164 89080667 - antisense NOVEL OTTHUMG00000185795.1 504 504 1 ENSG00000146278.10 PNRC1 chr6 89080751 89085160 + protein_coding KNOWN OTTHUMG00000015191.2 4410 2992 6 ENSG00000264017.2 RN7SL336P chr6 89090946 89091242 + misc_RNA KNOWN NA 297 297 1 ENSG00000154548.8 SRSF12 chr6 89095959 89118081 - protein_coding KNOWN OTTHUMG00000015192.2 22123 4548 17 ENSG00000146281.5 PM20D2 chr6 89146050 89165565 + protein_coding NOVEL OTTHUMG00000015193.1 19516 4708 7 ENSG00000281765.1 AL353135.1 chr6 89176543 89176677 - miRNA NOVEL NA 135 135 1 ENSG00000181227.3 RP4-682C21.2 chr1 75743423 75744776 - processed_pseudogene KNOWN OTTHUMG00000009785.1 1354 1354 1 ENSG00000146276.10 GABRR1 chr6 89177501 89231278 - protein_coding KNOWN OTTHUMG00000015195.2 53778 3778 66 ENSG00000111886.10 GABRR2 chr6 89257208 89315299 - protein_coding KNOWN OTTHUMG00000015198.3 58092 2230 19 ENSG00000220418.1 TUBB3P1 chr6 89301783 89303114 + processed_pseudogene KNOWN OTTHUMG00000015197.1 1332 1332 1 ENSG00000198833.6 UBE2J1 chr6 89326625 89352848 - protein_coding KNOWN OTTHUMG00000016337.2 26224 4290 8 ENSG00000025039.13 RRAGD chr6 89364636 89412270 - protein_coding KNOWN OTTHUMG00000015200.2 47635 5072 18 ENSG00000218965.1 NACAP7 chr6 89422099 89423048 - processed_pseudogene KNOWN OTTHUMG00000015201.1 950 609 2 ENSG00000135299.15 ANKRD6 chr6 89433170 89633834 + protein_coding KNOWN OTTHUMG00000015202.5 200665 8329 168 ENSG00000239316.3 RN7SL11P chr6 89478141 89478433 + misc_RNA KNOWN NA 293 293 1 ENSG00000237027.1 RP11-16C18.3 chr6 89560875 89567044 - antisense NOVEL OTTHUMG00000046174.1 6170 1171 5 ENSG00000083099.9 LYRM2 chr6 89568144 89638753 - protein_coding KNOWN OTTHUMG00000015203.2 70610 8679 41 ENSG00000227372.9 TP73-AS1 chr1 3735601 3747336 - antisense KNOWN OTTHUMG00000003414.4 11736 7205 32 ENSG00000137955.14 RABGGTB chr1 75786197 75795079 + protein_coding KNOWN OTTHUMG00000009786.2 8883 5913 79 ENSG00000112159.10 MDN1 chr6 89642499 89819723 - protein_coding KNOWN OTTHUMG00000015213.3 177225 18602 232 ENSG00000228124.1 RP1-122O8.7 chr6 89673469 89675783 + antisense NOVEL OTTHUMG00000015204.1 2315 472 2 ENSG00000220871.1 DNAJC19P6 chr6 89797598 89797877 + processed_pseudogene KNOWN OTTHUMG00000015206.1 280 280 1 ENSG00000217653.1 RP11-63K6.1 chr6 89814709 89815463 + processed_pseudogene KNOWN OTTHUMG00000015207.1 755 755 1 ENSG00000118412.11 CASP8AP2 chr6 89829894 89874436 + protein_coding KNOWN OTTHUMG00000015212.6 44543 8171 47 ENSG00000199630.1 Y_RNA chr6 89841329 89841424 + misc_RNA NOVEL NA 96 96 1 ENSG00000218300.1 RP11-63K6.4 chr6 89876544 89876878 + processed_pseudogene KNOWN OTTHUMG00000015208.1 335 335 1 ENSG00000219240.2 RP11-63K6.5 chr6 89886156 89887848 + processed_pseudogene KNOWN OTTHUMG00000015209.2 1693 1396 2 ENSG00000135355.3 GJA10 chr6 89894469 89896120 + protein_coding KNOWN OTTHUMG00000015210.1 1652 1652 1 ENSG00000252891.1 Y_RNA chr6 89898283 89898392 - misc_RNA NOVEL NA 110 110 1 ENSG00000206620.1 SNORD45C chr1 75787072 75787150 + snoRNA KNOWN NA 79 79 1 ENSG00000232532.1 RP11-63K6.7 chr6 89920196 89921760 + antisense NOVEL OTTHUMG00000015211.1 1565 756 2 ENSG00000112182.13 BACH2 chr6 89926529 90296908 - protein_coding KNOWN OTTHUMG00000015216.3 370380 9786 49 ENSG00000226455.1 RP3-512E2.2 chr6 89950116 89953186 + antisense NOVEL OTTHUMG00000015214.1 3071 935 5 ENSG00000222078.1 RN7SKP110 chr6 90001222 90001506 - misc_RNA KNOWN NA 285 285 1 ENSG00000218730.1 RP3-453I5.2 chr6 90116700 90117105 - processed_pseudogene KNOWN OTTHUMG00000015215.1 406 406 1 ENSG00000266760.1 MIR4464 chr6 90312742 90312833 + miRNA KNOWN NA 92 92 1 ENSG00000260271.1 RP1-45N11.1 chr6 90345219 90362632 + lincRNA NOVEL OTTHUMG00000175929.1 17414 1431 6 ENSG00000252676.1 AL391559.1 chr6 90446772 90446846 + miRNA NOVEL NA 75 75 1 ENSG00000135341.16 MAP3K7 chr6 90513573 90587045 - protein_coding KNOWN OTTHUMG00000015217.1 73473 7227 78 ENSG00000224605.1 RP1-177I10.1 chr6 91390313 91393000 - lincRNA NOVEL OTTHUMG00000015218.1 2688 442 3 ENSG00000207241.1 SNORD45A chr1 75787889 75787972 + snoRNA KNOWN NA 84 84 1 ENSG00000263734.1 MIR4643 chr6 91521660 91521737 + miRNA KNOWN NA 78 78 1 ENSG00000224944.1 CASC6 chr6 91629915 91690428 - lincRNA NOVEL OTTHUMG00000015221.1 60514 733 4 ENSG00000262095.1 RP3-433F14.4 chr6 91726810 91727070 + processed_pseudogene KNOWN OTTHUMG00000177315.1 261 261 1 ENSG00000219087.2 RP3-433F14.2 chr6 91727159 91727324 + processed_pseudogene KNOWN OTTHUMG00000015220.2 166 166 1 ENSG00000220340.1 RP3-433F14.1 chr6 91727282 91727505 - processed_pseudogene KNOWN OTTHUMG00000015219.1 224 224 1 ENSG00000240961.3 RN7SL415P chr6 91739609 91739897 + misc_RNA KNOWN NA 289 289 1 ENSG00000219867.1 RP11-40G16.1 chr6 91815843 91816428 - processed_pseudogene KNOWN OTTHUMG00000015222.1 586 586 1 ENSG00000220553.1 RPL5P19 chr6 92013842 92014734 + processed_pseudogene KNOWN OTTHUMG00000015223.1 893 893 1 ENSG00000200492.2 U3 chr6 92119423 92119633 + snoRNA NOVEL NA 211 211 1 ENSG00000261038.1 RP1-149C7.1 chr6 92387841 92388827 - lincRNA NOVEL OTTHUMG00000175930.1 987 987 1 ENSG00000201487.1 SNORD45B chr1 75789477 75789548 + snoRNA KNOWN NA 72 72 1 ENSG00000265419.1 AL359987.1 chr6 92644741 92644808 + miRNA NOVEL NA 68 68 1 ENSG00000220908.2 RP11-127B16.1 chr6 92723003 92723829 - lincRNA NOVEL OTTHUMG00000015224.1 827 593 2 ENSG00000221455.2 U3 chr6 92790453 92790665 + snoRNA NOVEL NA 213 213 1 ENSG00000238412.2 AL589947.1 chr6 92812045 92812171 + miRNA NOVEL NA 127 127 1 ENSG00000219387.2 ATF1P1 chr6 92887251 92888581 - processed_pseudogene KNOWN OTTHUMG00000015225.2 1331 927 2 ENSG00000235099.1 RP1-23E21.2 chr6 93070387 93103384 + lincRNA NOVEL OTTHUMG00000015227.1 32998 739 2 ENSG00000213187.3 COPS5P1 chr6 93091976 93092760 - processed_pseudogene KNOWN OTTHUMG00000015226.1 785 785 1 ENSG00000135333.12 EPHA7 chr6 93240020 93419547 - protein_coding KNOWN OTTHUMG00000015228.1 179528 7456 20 ENSG00000280451.1 RP11-64I5.1 chr6 93811825 93813036 + TEC KNOWN OTTHUMG00000175931.1 1212 1212 1 ENSG00000252249.1 SNORA18 chr6 93879106 93879229 + snoRNA NOVEL NA 124 124 1 ENSG00000057468.6 MSH4 chr1 75796882 75913238 + protein_coding KNOWN OTTHUMG00000009788.1 116357 3266 20 ENSG00000229600.1 RP11-524K14.1 chr6 93886900 93889410 + lincRNA NOVEL OTTHUMG00000015229.1 2511 484 2 ENSG00000231143.1 RP3-463P15.1 chr6 94163920 94194658 + lincRNA NOVEL OTTHUMG00000015230.1 30739 265 2 ENSG00000220370.1 RP3-399J4.2 chr6 94344737 94344962 + processed_pseudogene KNOWN OTTHUMG00000015232.1 226 226 1 ENSG00000279403.1 RP3-399J4.3 chr6 94397664 94398829 + TEC KNOWN OTTHUMG00000175932.1 1166 1166 1 ENSG00000270484.1 RP3-399J4.4 chr6 94442030 94443809 - processed_pseudogene KNOWN OTTHUMG00000184583.1 1780 1780 1 ENSG00000216853.1 RP3-399J4.1 chr6 94446740 94447179 - processed_pseudogene KNOWN OTTHUMG00000015231.1 440 440 1 ENSG00000219627.1 CYCSP17 chr6 95504182 95504496 + processed_pseudogene KNOWN OTTHUMG00000015233.1 315 315 1 ENSG00000261366.1 MANEA-AS1 chr6 95575183 95577450 - antisense NOVEL OTTHUMG00000175933.1 2268 2268 1 ENSG00000172469.13 MANEA chr6 95577543 95609457 + protein_coding KNOWN OTTHUMG00000016296.1 31915 5187 15 ENSG00000219549.1 RP11-374I15.1 chr6 95630115 95632929 - processed_pseudogene KNOWN OTTHUMG00000015234.1 2815 499 2 ENSG00000266832.1 AL445464.1 chr1 75842632 75842717 + miRNA NOVEL NA 86 86 1 ENSG00000219941.1 KRT18P50 chr6 95991107 95992349 + processed_pseudogene KNOWN OTTHUMG00000015235.1 1243 1243 1 ENSG00000172461.9 FUT9 chr6 96015984 96215612 + protein_coding KNOWN OTTHUMG00000015236.2 199629 13719 6 ENSG00000242560.3 RN7SL797P chr6 96282567 96282863 + misc_RNA KNOWN NA 297 297 1 ENSG00000233797.1 UFL1-AS1 chr6 96358374 96521669 - antisense NOVEL OTTHUMG00000015237.1 163296 548 7 ENSG00000014123.9 UFL1 chr6 96521595 96555276 + protein_coding KNOWN OTTHUMG00000015238.1 33682 4539 21 ENSG00000112214.9 FHL5 chr6 96562548 96616636 + protein_coding KNOWN OTTHUMG00000015239.1 54089 2135 18 ENSG00000213183.3 RPS7P8 chr6 96648489 96649069 - processed_pseudogene KNOWN OTTHUMG00000015240.1 581 581 1 ENSG00000207309.1 RNU4-70P chr6 96649453 96649591 - snRNA KNOWN NA 139 139 1 ENSG00000219139.1 RP11-304C16.2 chr6 96653274 96654142 + processed_pseudogene KNOWN OTTHUMG00000015241.1 869 869 1 ENSG00000217331.1 RP11-304C16.3 chr6 96672129 96672969 - processed_pseudogene KNOWN OTTHUMG00000015242.1 841 841 1 ENSG00000154007.6 ASB17 chr1 75918873 75932431 - protein_coding KNOWN OTTHUMG00000009787.1 13559 1107 3 ENSG00000216518.1 EEF1GP6 chr6 96750824 96751728 + processed_pseudogene KNOWN OTTHUMG00000015243.1 905 905 1 ENSG00000224384.1 RP3-417O22.3 chr6 96785137 96795821 + antisense NOVEL OTTHUMG00000015244.1 10685 481 3 ENSG00000112218.8 GPR63 chr6 96794126 96837463 - protein_coding KNOWN OTTHUMG00000015245.2 43338 5952 2 ENSG00000123545.5 NDUFAF4 chr6 96889313 96897881 - protein_coding KNOWN OTTHUMG00000015246.1 8569 2540 9 ENSG00000263479.2 RN7SL509P chr6 96914699 96914995 - misc_RNA KNOWN NA 297 297 1 ENSG00000186231.15 KLHL32 chr6 96924620 97140754 + protein_coding KNOWN OTTHUMG00000015247.1 216135 4124 58 ENSG00000146263.10 MMS22L chr6 97142161 97283217 - protein_coding KNOWN OTTHUMG00000015248.4 141057 21793 114 ENSG00000226684.2 RP3-418C23.2 chr6 97283303 97310048 + lincRNA NOVEL OTTHUMG00000015249.2 26746 882 4 ENSG00000224849.2 RP1-104O17.1 chr6 97702281 97708103 + lincRNA NOVEL OTTHUMG00000015250.1 5823 501 2 ENSG00000242486.1 RP1-104O17.2 chr6 97707759 97732712 + lincRNA NOVEL OTTHUMG00000015251.1 24954 357 2 ENSG00000225605.1 RP11-550H2.1 chr1 76011324 76019356 + lincRNA NOVEL OTTHUMG00000009790.1 8033 369 3 ENSG00000226207.1 RP1-104O17.3 chr6 97710953 97717197 - lincRNA NOVEL OTTHUMG00000015252.1 6245 499 3 ENSG00000271860.4 RP11-436D23.1 chr6 97816709 98399872 + lincRNA NOVEL OTTHUMG00000015255.2 583164 2697 20 ENSG00000238367.1 MIR2113 chr6 98024531 98024621 + miRNA KNOWN NA 91 91 1 ENSG00000220505.2 EIF4EBP2P3 chr6 98179499 98179832 - processed_pseudogene KNOWN OTTHUMG00000015253.2 334 334 1 ENSG00000236920.2 RP11-111D3.2 chr6 98210020 98214683 - lincRNA NOVEL OTTHUMG00000015254.2 4664 771 2 ENSG00000187472.3 RP11-67P15.1 chr6 98780257 98793992 - processed_pseudogene KNOWN OTTHUMG00000015257.2 13736 276 2 ENSG00000184486.8 POU3F2 chr6 98834592 98839490 + protein_coding KNOWN OTTHUMG00000015258.2 4899 4899 1 ENSG00000112234.7 FBXL4 chr6 98868538 98948006 - protein_coding KNOWN OTTHUMG00000015259.3 79469 8115 19 ENSG00000271042.1 RP3-364H10.1 chr6 99082449 99082761 + processed_pseudogene KNOWN OTTHUMG00000184408.1 313 313 1 ENSG00000265226.1 MIR548AI chr6 99124609 99124696 + miRNA KNOWN NA 88 88 1 ENSG00000230027.1 RP11-550H2.2 chr1 76041691 76066228 + lincRNA NOVEL OTTHUMG00000009791.1 24538 399 2 ENSG00000232699.3 BDH2P1 chr6 99174744 99175479 + processed_pseudogene KNOWN OTTHUMG00000015260.2 736 736 1 ENSG00000146267.11 FAXC chr6 99271169 99350062 - protein_coding KNOWN OTTHUMG00000015261.4 78894 11662 16 ENSG00000132423.9 COQ3 chr6 99369400 99394204 - protein_coding KNOWN OTTHUMG00000015264.1 24805 1458 24 ENSG00000132424.13 PNISR chr6 99398051 99425331 - protein_coding KNOWN OTTHUMG00000015262.3 27281 10870 58 ENSG00000228506.1 RP11-98I9.4 chr6 99424922 99431373 + antisense NOVEL OTTHUMG00000015263.1 6452 1638 2 ENSG00000123552.16 USP45 chr6 99432379 99521728 - protein_coding KNOWN OTTHUMG00000015267.6 89350 8051 127 ENSG00000228439.4 TSTD3 chr6 99520693 99531918 + antisense NOVEL OTTHUMG00000015265.2 11226 962 4 ENSG00000274603.1 Y_RNA chr6 99526097 99526205 + misc_RNA NOVEL NA 109 109 1 ENSG00000112237.11 CCNC chr6 99542380 99568973 - protein_coding KNOWN OTTHUMG00000015268.3 26594 5765 176 ENSG00000272017.1 RP1-199J3.7 chr6 99568097 99569096 + antisense NOVEL OTTHUMG00000185800.1 1000 1000 1 ENSG00000184005.10 ST6GALNAC3 chr1 76074719 76634601 + protein_coding KNOWN OTTHUMG00000009615.1 559883 7237 11 ENSG00000219755.1 RP1-199J3.5 chr6 99575712 99576456 + processed_pseudogene KNOWN OTTHUMG00000015266.1 745 745 1 ENSG00000279170.1 RP1-199J3.6 chr6 99587611 99589898 + TEC KNOWN OTTHUMG00000175934.1 2288 2288 1 ENSG00000112238.11 PRDM13 chr6 99606730 99615578 + protein_coding KNOWN OTTHUMG00000015269.3 8849 3276 8 ENSG00000199303.1 Y_RNA chr6 99642237 99642347 - misc_RNA NOVEL NA 111 111 1 ENSG00000152034.9 MCHR2 chr6 99919910 99994247 - protein_coding KNOWN OTTHUMG00000015270.2 74338 2392 12 ENSG00000229315.5 MCHR2-AS1 chr6 99993944 100076413 + antisense NOVEL OTTHUMG00000015271.3 82470 1268 15 ENSG00000219257.2 NPM1P38 chr6 100050372 100051236 - processed_pseudogene KNOWN OTTHUMG00000015272.2 865 865 1 ENSG00000275716.1 RP3-344J20.3 chr6 100093311 100093768 - processed_pseudogene KNOWN OTTHUMG00000187635.1 458 458 1 ENSG00000213177.3 PRDX2P4 chr6 100136064 100136663 + processed_pseudogene KNOWN OTTHUMG00000015274.1 600 600 1 ENSG00000216378.1 RP3-344J20.1 chr6 100177209 100178192 + processed_pseudogene KNOWN OTTHUMG00000015273.1 984 984 1 ENSG00000276189.1 TP73-AS1 chr1 3736943 3737103 + misc_RNA NOVEL NA 161 161 1 ENSG00000223905.1 RP11-335E14.1 chr1 76353583 76354246 - processed_pseudogene KNOWN OTTHUMG00000009614.1 664 664 1 ENSG00000275020.1 AL080285.1 chr6 100229545 100229649 - miRNA NOVEL NA 105 105 1 ENSG00000112246.8 SIM1 chr6 100385015 100464929 - protein_coding KNOWN OTTHUMG00000015275.3 79915 9274 27 ENSG00000228082.1 RP1-121G13.2 chr6 100427118 100437484 + antisense NOVEL OTTHUMG00000015276.1 10367 380 2 ENSG00000112249.12 ASCC3 chr6 100508194 100881372 - protein_coding KNOWN OTTHUMG00000015279.2 373179 11731 89 ENSG00000220695.1 RP1-121G13.3 chr6 100530276 100531052 + processed_pseudogene KNOWN OTTHUMG00000015277.2 777 777 1 ENSG00000260000.2 RP3-467N11.1 chr6 100881471 100882987 + antisense NOVEL OTTHUMG00000175935.2 1517 1517 1 ENSG00000270987.1 RP3-467N11.2 chr6 100889603 100890338 + processed_pseudogene KNOWN OTTHUMG00000184407.1 736 736 1 ENSG00000164418.18 GRIK2 chr6 101398788 102070083 + protein_coding KNOWN OTTHUMG00000016328.4 671296 7375 117 ENSG00000218475.2 RP11-93K7.1 chr6 101430411 101431553 - processed_pseudogene KNOWN OTTHUMG00000015280.2 1143 1143 1 ENSG00000218536.1 AP002530.2 chr6 102078872 102079555 + processed_pseudogene KNOWN OTTHUMG00000015281.1 684 684 1 ENSG00000272855.1 RP5-1102E8.3 chr1 76636877 76637339 + lincRNA NOVEL OTTHUMG00000186140.1 463 463 1 ENSG00000219757.1 RP11-793L10.1 chr6 102453367 102453792 - processed_pseudogene KNOWN OTTHUMG00000015282.1 426 426 1 ENSG00000276165.1 AL513011.1 chr6 102828886 102828976 + miRNA NOVEL NA 91 91 1 ENSG00000217120.1 RP1-76C18.1 chr6 103002514 103003897 + processed_pseudogene KNOWN OTTHUMG00000015283.1 1384 1384 1 ENSG00000202283.1 SNORA33 chr6 103583135 103583268 + snoRNA NOVEL NA 134 134 1 ENSG00000216817.1 R3HDM2P2 chr6 104017633 104019748 - processed_pseudogene KNOWN OTTHUMG00000015285.1 2116 2116 1 ENSG00000214428.3 NPM1P10 chr6 104025540 104026763 - processed_pseudogene KNOWN OTTHUMG00000015284.2 1224 865 2 ENSG00000218173.1 RP11-427E4.1 chr6 104687241 104687671 + processed_pseudogene KNOWN OTTHUMG00000015286.1 431 431 1 ENSG00000085382.10 HACE1 chr6 104728093 104859919 - protein_coding KNOWN OTTHUMG00000015287.3 131827 9238 147 ENSG00000252944.1 RNU6-897P chr6 104766822 104766926 + snRNA KNOWN NA 105 105 1 ENSG00000227535.2 RP11-809N15.2 chr6 104831129 104845820 - sense_overlapping NOVEL OTTHUMG00000015288.2 14692 254 3 ENSG00000226415.1 TPI1P1 chr1 76699789 76700538 + processed_pseudogene KNOWN OTTHUMG00000009616.1 750 750 1 ENSG00000271099.1 RP11-809N15.3 chr6 104860449 104862123 + processed_pseudogene KNOWN OTTHUMG00000184406.1 1675 1675 1 ENSG00000203809.5 LINC00577 chr6 104936294 104940527 - lincRNA NOVEL OTTHUMG00000015289.2 4234 575 3 ENSG00000187772.6 LIN28B chr6 104957048 105083332 + protein_coding KNOWN OTTHUMG00000015290.2 126285 5505 4 ENSG00000212147.1 RNU6-1106P chr6 105045562 105045668 - snRNA KNOWN NA 107 107 1 ENSG00000112276.12 BVES chr6 105096822 105137174 - protein_coding KNOWN OTTHUMG00000015291.2 40353 5808 24 ENSG00000203808.9 BVES-AS1 chr6 105136308 105169945 + antisense KNOWN OTTHUMG00000015292.2 33638 2347 18 ENSG00000132429.8 POPDC3 chr6 105158280 105179995 - protein_coding KNOWN OTTHUMG00000015293.1 21716 1881 14 ENSG00000252918.1 AL359709.1 chr6 105196853 105196936 - miRNA NOVEL NA 84 84 1 ENSG00000272102.1 RP3-355L5.5 chr6 105273220 105273760 - lincRNA NOVEL OTTHUMG00000185802.1 541 541 1 ENSG00000085377.12 PREP chr6 105277565 105403084 - protein_coding KNOWN OTTHUMG00000015297.1 125520 3762 17 ENSG00000264686.1 AC104458.1 chr1 76718140 76718241 + miRNA NOVEL NA 102 102 1 ENSG00000231628.1 RP3-355L5.4 chr6 105279016 105281755 + antisense NOVEL OTTHUMG00000015296.1 2740 1198 2 ENSG00000216639.1 RP3-355L5.3 chr6 105298149 105298895 + processed_pseudogene KNOWN OTTHUMG00000015295.1 747 747 1 ENSG00000219902.1 RPL35P3 chr6 105302453 105302823 - processed_pseudogene KNOWN OTTHUMG00000015294.1 371 371 1 ENSG00000237567.1 RP3-359N14.2 chr6 105612667 105632196 - lincRNA NOVEL OTTHUMG00000015298.1 19530 589 6 ENSG00000219088.1 RP3-359N14.1 chr6 105666326 105667998 + processed_pseudogene KNOWN OTTHUMG00000016419.1 1673 1673 1 ENSG00000200198.1 RN7SKP211 chr6 105904373 105904687 + misc_RNA KNOWN NA 315 315 1 ENSG00000057657.13 PRDM1 chr6 106086320 106109939 + protein_coding KNOWN OTTHUMG00000015299.3 23620 6369 38 ENSG00000269919.1 RP1-134E15.3 chr6 106100140 106100593 + sense_intronic NOVEL OTTHUMG00000184068.1 454 454 1 ENSG00000057663.11 ATG5 chr6 106184476 106325820 - protein_coding KNOWN OTTHUMG00000016193.2 141345 3953 39 ENSG00000273744.1 U4 chr6 106271634 106271720 + snRNA NOVEL NA 87 87 1 ENSG00000199921.1 RNU6-161P chr1 76753135 76753240 + snRNA KNOWN NA 106 106 1 ENSG00000244710.3 RN7SL47P chr6 106283413 106283711 - misc_RNA KNOWN NA 299 299 1 ENSG00000252444.1 RNU6-344P chr6 106304176 106304286 + snRNA KNOWN NA 111 111 1 ENSG00000233941.1 RP11-404H14.1 chr6 106358566 106359717 - antisense NOVEL OTTHUMG00000015300.1 1152 414 2 ENSG00000207499.1 Y_RNA chr6 106420706 106420807 + misc_RNA NOVEL NA 102 102 1 ENSG00000202386.1 RNA5SP211 chr6 106449381 106449497 + rRNA KNOWN NA 117 117 1 ENSG00000200314.1 Y_RNA chr6 106454828 106454929 + misc_RNA NOVEL NA 102 102 1 ENSG00000112297.13 AIM1 chr6 106511855 106570451 + protein_coding KNOWN OTTHUMG00000015302.1 58597 8009 32 ENSG00000130347.11 RTN4IP1 chr6 106571971 106629487 - protein_coding KNOWN OTTHUMG00000015304.1 57517 1974 19 ENSG00000200295.1 RNU6-527P chr6 106607716 106607819 + snRNA KNOWN NA 104 104 1 ENSG00000130348.10 QRSL1 chr6 106629578 106668417 + protein_coding KNOWN OTTHUMG00000015301.1 38840 5453 22 ENSG00000237552.1 RP11-415A20.1 chr1 76758124 76779267 - lincRNA NOVEL OTTHUMG00000009684.1 21144 448 3 ENSG00000216977.1 RPL21P65 chr6 106642463 106642928 + processed_pseudogene KNOWN OTTHUMG00000015303.1 466 466 1 ENSG00000229654.1 RP1-60O19.2 chr6 106695535 106699994 + lincRNA NOVEL OTTHUMG00000015306.1 4460 419 3 ENSG00000235142.6 RP1-60O19.1 chr6 106717452 106787541 - lincRNA NOVEL OTTHUMG00000015305.4 70090 6610 46 ENSG00000202285.1 RNU6-117P chr6 106738948 106739054 - snRNA KNOWN NA 107 107 1 ENSG00000207577.1 MIR587 chr6 106784125 106784220 + miRNA KNOWN NA 96 96 1 ENSG00000272398.4 CD24 chr6 106969831 106975627 - protein_coding KNOWN OTTHUMG00000188439.1 5797 3097 19 ENSG00000130349.8 C6orf203 chr6 107028213 107051342 + protein_coding KNOWN OTTHUMG00000015307.3 23130 2036 15 ENSG00000178409.12 BEND3 chr6 107065182 107115269 - protein_coding KNOWN OTTHUMG00000015308.1 50088 6839 9 ENSG00000252125.1 RNU6-1299P chr6 107133071 107133170 + snRNA KNOWN NA 100 100 1 ENSG00000164494.10 PDSS2 chr6 107152557 107459564 - protein_coding KNOWN OTTHUMG00000059359.1 307008 3926 15 ENSG00000117069.13 ST6GALNAC5 chr1 76867441 77065711 + protein_coding KNOWN OTTHUMG00000009687.4 198271 4263 18 ENSG00000276620.1 RP11-300D11.3 chr6 107192300 107192573 + processed_pseudogene KNOWN OTTHUMG00000187636.1 274 274 1 ENSG00000220237.1 RPS24P12 chr6 107229759 107230152 + processed_pseudogene KNOWN OTTHUMG00000015309.1 394 394 1 ENSG00000112320.10 SOBP chr6 107489958 107660167 + protein_coding KNOWN OTTHUMG00000015312.3 170210 6904 18 ENSG00000234206.4 RP1-67A8.3 chr6 107509803 107511721 - antisense NOVEL OTTHUMG00000015310.1 1919 604 5 ENSG00000280135.1 RP1-47M23.3 chr6 107697299 107700218 - TEC KNOWN OTTHUMG00000175936.1 2920 2920 1 ENSG00000146285.12 SCML4 chr6 107704104 107824317 - protein_coding KNOWN OTTHUMG00000015313.4 120214 7116 56 ENSG00000025796.12 SEC63 chr6 107867756 107958189 - protein_coding KNOWN OTTHUMG00000015316.5 90434 8587 59 ENSG00000238420.1 RNU6-437P chr6 107930088 107930182 + snRNA KNOWN NA 95 95 1 ENSG00000232778.1 RPL23AP50 chr6 107931800 107932254 + processed_pseudogene KNOWN OTTHUMG00000015314.2 455 455 1 ENSG00000272476.1 RP1-191J18.66 chr6 107957413 107959986 + antisense NOVEL OTTHUMG00000185803.1 2574 2574 1 ENSG00000221720.2 AC096951.1 chr1 77007744 77007815 + miRNA NOVEL NA 72 72 1 ENSG00000224987.1 RP1-191J18.65 chr6 107985089 107985690 - processed_pseudogene KNOWN OTTHUMG00000048758.1 602 274 2 ENSG00000253090.2 SNORA73 chr6 107985659 107985773 - snoRNA NOVEL NA 115 115 1 ENSG00000231112.1 MTHFD2P3 chr6 107985811 107986031 - processed_pseudogene KNOWN OTTHUMG00000015315.2 221 221 1 ENSG00000225093.1 RPL3P7 chr6 108004357 108005568 - processed_pseudogene KNOWN OTTHUMG00000015318.2 1212 1212 1 ENSG00000271734.1 RP1-111B22.3 chr6 108030249 108030718 - lincRNA NOVEL OTTHUMG00000185804.1 470 470 1 ENSG00000081087.13 OSTM1 chr6 108041409 108165854 - protein_coding KNOWN OTTHUMG00000015317.5 124446 5325 28 ENSG00000238490.1 Y_RNA chr6 108060818 108060930 + misc_RNA NOVEL NA 113 113 1 ENSG00000225174.1 OSTM1-AS1 chr6 108123515 108159392 + lincRNA NOVEL OTTHUMG00000015320.2 35878 3452 4 ENSG00000112333.10 NR2E1 chr6 108166058 108188809 + protein_coding KNOWN OTTHUMG00000015319.4 22752 3733 25 ENSG00000279398.1 RP3-429G5.5 chr6 108178871 108179317 + TEC KNOWN OTTHUMG00000150108.1 447 447 1 ENSG00000276081.1 MIR7156 chr1 77060143 77060202 + miRNA KNOWN NA 60 60 1 ENSG00000112335.13 SNX3 chr6 108211222 108261260 - protein_coding KNOWN OTTHUMG00000015323.4 50039 1842 16 ENSG00000233511.1 RP1-128O3.5 chr6 108252214 108252400 + processed_pseudogene KNOWN OTTHUMG00000055218.1 187 187 1 ENSG00000212525.1 RNA5SP212 chr6 108252401 108252507 + rRNA KNOWN NA 107 107 1 ENSG00000230248.1 RP1-128O3.4 chr6 108275642 108276546 + lincRNA NOVEL OTTHUMG00000015322.2 905 632 2 ENSG00000206974.1 RNU6-1144P chr6 108292766 108292869 + snRNA KNOWN NA 104 104 1 ENSG00000135537.15 LACE1 chr6 108294894 108526796 + protein_coding KNOWN OTTHUMG00000015324.6 231903 8450 46 ENSG00000238055.1 RP1-128O3.6 chr6 108318079 108318404 + processed_pseudogene KNOWN OTTHUMG00000102191.1 326 326 1 ENSG00000279498.1 RP11-72I2.2 chr6 108359084 108359863 - TEC KNOWN OTTHUMG00000150107.1 780 780 1 ENSG00000238079.1 RP11-72I2.1 chr6 108372772 108372927 - processed_pseudogene KNOWN OTTHUMG00000102192.2 156 156 1 ENSG00000227072.1 RP3-466I7.1 chr6 108387512 108388080 + processed_pseudogene KNOWN OTTHUMG00000102193.1 569 494 2 ENSG00000230498.1 RP4-564M11.2 chr1 77067920 77078482 + antisense NOVEL OTTHUMG00000009688.1 10563 497 4 ENSG00000200799.1 RNU6-770P chr6 108392073 108392177 + snRNA KNOWN NA 105 105 1 ENSG00000271608.1 RP11-697G4.4 chr6 108551018 108551207 - processed_pseudogene KNOWN OTTHUMG00000184582.1 190 190 1 ENSG00000118689.13 FOXO3 chr6 108559835 108684774 + protein_coding KNOWN OTTHUMG00000015327.2 124940 7721 10 ENSG00000228976.1 SUMO2P8 chr6 108618000 108618285 - processed_pseudogene KNOWN OTTHUMG00000015326.2 286 286 1 ENSG00000203801.7 LINC00222 chr6 108751654 108769942 + lincRNA NOVEL OTTHUMG00000015330.2 18289 3311 28 ENSG00000219565.2 ZNF259P1 chr6 108782126 108787053 - transcribed_processed_pseudogene KNOWN OTTHUMG00000016136.2 4928 4928 2 ENSG00000231559.1 RP3-354J5.3 chr6 108817680 108817926 + processed_pseudogene KNOWN OTTHUMG00000157125.1 247 247 1 ENSG00000118690.11 ARMC2 chr6 108848416 108974472 + protein_coding KNOWN OTTHUMG00000015335.3 126057 4250 48 ENSG00000218872.1 RP11-249L21.2 chr6 108856400 108856737 - processed_pseudogene KNOWN OTTHUMG00000015332.1 338 338 1 ENSG00000228834.1 RP11-249L21.4 chr6 108907615 108907873 - processed_pseudogene KNOWN OTTHUMG00000015333.2 259 259 1 ENSG00000162592.7 CCDC27 chr1 3752398 3771645 + protein_coding KNOWN OTTHUMG00000003504.3 19248 2318 24 ENSG00000142892.13 PIGK chr1 77088990 77219430 - protein_coding KNOWN OTTHUMG00000009686.2 130441 5513 42 ENSG00000230290.1 ARMC2-AS1 chr6 108922976 108924103 - antisense NOVEL OTTHUMG00000015334.1 1128 112 2 ENSG00000080546.12 SESN1 chr6 108986437 109094819 - protein_coding KNOWN OTTHUMG00000015338.6 108383 5121 41 ENSG00000271730.1 RP11-787I22.3 chr6 108998482 108999125 + antisense NOVEL OTTHUMG00000185805.1 644 644 1 ENSG00000199944.1 RNU6-653P chr6 109059509 109059614 - snRNA KNOWN NA 106 106 1 ENSG00000183137.13 CEP57L1 chr6 109095110 109163932 + protein_coding KNOWN OTTHUMG00000015336.6 68823 6432 184 ENSG00000243587.6 C6orf183 chr6 109165833 109271014 + polymorphic_pseudogene KNOWN OTTHUMG00000015337.4 105182 4362 25 ENSG00000203799.9 CCDC162P chr6 109285485 109355063 + unitary_pseudogene KNOWN OTTHUMG00000015342.5 69579 5378 58 ENSG00000233908.1 RP11-425D10.1 chr6 109288440 109288562 + processed_pseudogene KNOWN OTTHUMG00000015340.2 123 123 1 ENSG00000219700.1 PTCHD3P3 chr6 109288571 109290503 - processed_pseudogene KNOWN OTTHUMG00000015341.1 1933 906 2 ENSG00000201023.1 RNY3P11 chr6 109305494 109305595 + misc_RNA KNOWN NA 102 102 1 ENSG00000226084.5 RP4-706A16.3 chr1 77129114 77129668 + processed_pseudogene KNOWN OTTHUMG00000009683.1 555 555 1 ENSG00000218632.3 RPL7P28 chr6 109327175 109327914 - processed_pseudogene KNOWN OTTHUMG00000015343.2 740 740 1 ENSG00000135535.13 CD164 chr6 109366514 109382559 - protein_coding KNOWN OTTHUMG00000015339.2 16046 6944 59 ENSG00000260273.1 RP11-425D10.10 chr6 109382795 109383666 + antisense NOVEL OTTHUMG00000175937.1 872 872 1 ENSG00000185250.14 PPIL6 chr6 109390215 109441171 - protein_coding KNOWN OTTHUMG00000036593.5 50957 4481 55 ENSG00000239160.1 AL109947.1 chr6 109434174 109434240 - miRNA NOVEL NA 67 67 1 ENSG00000135587.7 SMPD2 chr6 109440763 109443919 + protein_coding KNOWN OTTHUMG00000015348.2 3157 2014 17 ENSG00000135596.16 MICAL1 chr6 109444062 109465968 - protein_coding KNOWN OTTHUMG00000015350.7 21907 7056 124 ENSG00000112365.4 ZBTB24 chr6 109462594 109483237 - protein_coding KNOWN OTTHUMG00000015349.1 20644 5519 7 ENSG00000223537.2 RP5-919F19.5 chr6 109487906 109506800 + antisense NOVEL OTTHUMG00000015347.1 18895 382 3 ENSG00000155085.14 AK9 chr6 109492856 109691217 - protein_coding KNOWN OTTHUMG00000157658.7 198362 10098 143 ENSG00000228187.1 RP11-363H12.1 chr1 77194825 77195395 + processed_pseudogene KNOWN OTTHUMG00000009685.1 571 571 1 ENSG00000253037.1 AL109947.2 chr6 109504387 109504526 + miRNA NOVEL NA 140 140 1 ENSG00000112367.9 FIG4 chr6 109691312 109825428 + protein_coding KNOWN OTTHUMG00000015352.6 134117 3592 42 ENSG00000232311.1 RP1-249I4.2 chr6 109826522 109828785 + lincRNA NOVEL OTTHUMG00000015353.1 2264 465 2 ENSG00000146360.8 GPR6 chr6 109978256 109980718 + protein_coding KNOWN OTTHUMG00000015354.1 2463 1945 4 ENSG00000112290.11 WASF1 chr6 110099819 110180004 - protein_coding KNOWN OTTHUMG00000015357.3 80186 3260 78 ENSG00000168438.13 CDC40 chr6 110180141 110254275 + protein_coding KNOWN OTTHUMG00000015358.5 74135 5946 70 ENSG00000053328.8 METTL24 chr6 110245928 110358272 - protein_coding KNOWN OTTHUMG00000015359.1 112345 1774 7 ENSG00000203797.8 DDO chr6 110391771 110415562 - protein_coding KNOWN OTTHUMG00000015360.3 23792 2130 13 ENSG00000004809.12 SLC22A16 chr6 110424687 110476641 - protein_coding KNOWN OTTHUMG00000016171.4 51955 3907 41 ENSG00000241162.3 RN7SL617P chr6 110439996 110440303 - misc_RNA KNOWN NA 308 308 1 ENSG00000278671.1 AC093433.1 chr1 77276638 77276747 - miRNA NOVEL NA 110 110 1 ENSG00000281088.1 AC002464.1 chr6 110440082 110440165 - miRNA NOVEL NA 84 84 1 ENSG00000260188.1 CTA-331P3.1 chr6 110477907 110479436 + antisense NOVEL OTTHUMG00000175938.1 1530 1530 1 ENSG00000219559.1 RP11-346C16.4 chr6 110562175 110562615 - processed_pseudogene KNOWN OTTHUMG00000015363.1 441 441 1 ENSG00000270934.1 RP11-346C16.6 chr6 110598093 110598705 + processed_pseudogene KNOWN OTTHUMG00000184405.1 613 613 1 ENSG00000155111.13 CDK19 chr6 110609978 110815958 - protein_coding KNOWN OTTHUMG00000015365.6 205981 7492 61 ENSG00000213150.2 RP11-346C16.2 chr6 110645699 110646558 + processed_pseudogene KNOWN OTTHUMG00000015362.1 860 860 1 ENSG00000217041.1 RP11-346C16.1 chr6 110700562 110700900 + processed_pseudogene KNOWN OTTHUMG00000015361.1 339 339 1 ENSG00000219150.2 RP11-569A2.2 chr6 110706362 110706882 - processed_pseudogene KNOWN OTTHUMG00000015364.3 521 204 2 ENSG00000200522.1 RNU6-957P chr6 110722250 110722348 - snRNA KNOWN NA 99 99 1 ENSG00000123505.13 AMD1 chr6 110814621 110895713 + protein_coding KNOWN OTTHUMG00000015369.5 81093 7222 59 ENSG00000154027.17 AK5 chr1 77282051 77559969 + protein_coding KNOWN OTTHUMG00000009796.6 277919 6919 70 ENSG00000212587.1 SNORA40 chr6 110848546 110848673 + snoRNA NOVEL NA 128 128 1 ENSG00000199360.1 RNU6-1115P chr6 110856417 110856522 + snRNA KNOWN NA 106 106 1 ENSG00000213149.3 CNN2P9 chr6 110858239 110859147 + processed_pseudogene KNOWN OTTHUMG00000016267.1 909 909 1 ENSG00000271607.1 RP3-418A9.3 chr6 110863860 110864451 + processed_pseudogene KNOWN OTTHUMG00000184403.1 592 311 2 ENSG00000219329.1 RP11-397G5.2 chr6 110923566 110924107 + processed_pseudogene KNOWN OTTHUMG00000015366.1 542 542 1 ENSG00000155115.6 GTF3C6 chr6 110958560 110967890 + protein_coding KNOWN OTTHUMG00000015370.1 9331 1067 12 ENSG00000266032.1 AL357515.1 chr6 110969773 110969872 - miRNA NOVEL NA 100 100 1 ENSG00000197498.11 RPF2 chr6 110982015 111028263 + protein_coding KNOWN OTTHUMG00000015368.2 46249 3922 37 ENSG00000207431.1 RNU6-906P chr6 111008270 111008376 - snRNA KNOWN NA 107 107 1 ENSG00000218803.1 GSTM2P1 chr6 111046868 111047521 - processed_pseudogene KNOWN OTTHUMG00000015367.1 654 654 1 ENSG00000233099.1 RP11-375A5.1 chr1 77346046 77349585 - antisense NOVEL OTTHUMG00000039775.2 3540 377 2 ENSG00000112394.15 SLC16A10 chr6 111087503 111231194 + protein_coding KNOWN OTTHUMG00000015371.4 143692 11237 23 ENSG00000200926.1 RNU6-960P chr6 111091213 111091332 - snRNA KNOWN NA 120 120 1 ENSG00000231046.1 RP11-428F8.2 chr6 111227747 111259034 - antisense NOVEL OTTHUMG00000015375.1 31288 433 4 ENSG00000173214.5 KIAA1919 chr6 111259348 111271167 + protein_coding KNOWN OTTHUMG00000015372.1 11820 5958 4 ENSG00000230177.1 RP5-1112D6.4 chr6 111277932 111278742 + antisense NOVEL OTTHUMG00000015374.1 811 557 2 ENSG00000271789.1 RP5-1112D6.7 chr6 111297126 111298510 + lincRNA NOVEL OTTHUMG00000185815.1 1385 1385 1 ENSG00000009413.14 REV3L chr6 111299028 111483715 - protein_coding KNOWN OTTHUMG00000016318.4 184688 12425 232 ENSG00000272356.1 RP5-1112D6.8 chr6 111309203 111313517 + antisense NOVEL OTTHUMG00000185816.1 4315 4315 1 ENSG00000220392.1 FCF1P5 chr6 111353702 111354183 + processed_pseudogene KNOWN OTTHUMG00000015373.1 482 482 1 ENSG00000229276.1 REV3L-IT1 chr6 111360641 111361607 - sense_intronic NOVEL OTTHUMG00000046182.1 967 382 2 ENSG00000221664.1 AC095030.1 chr1 77391422 77391528 - miRNA NOVEL NA 107 107 1 ENSG00000218676.1 BRD7P4 chr6 111430260 111431781 + processed_pseudogene KNOWN OTTHUMG00000015376.1 1522 1522 1 ENSG00000231889.6 TRAF3IP2-AS1 chr6 111483511 111598302 + antisense NOVEL OTTHUMG00000015378.4 114792 4819 35 ENSG00000220506.2 RP3-415N12.1 chr6 111494991 111495713 - processed_pseudogene KNOWN OTTHUMG00000015377.2 723 654 2 ENSG00000056972.17 TRAF3IP2 chr6 111556454 111606278 - protein_coding KNOWN OTTHUMG00000015379.4 49825 6553 72 ENSG00000255389.1 C6orf3 chr6 111599875 111602295 + antisense KNOWN OTTHUMG00000165195.2 2421 2421 1 ENSG00000010810.16 FYN chr6 111660332 111873452 - protein_coding KNOWN OTTHUMG00000016305.8 213121 7411 194 ENSG00000227012.2 RP1-97J1.2 chr6 111900489 111901851 - lincRNA NOVEL OTTHUMG00000015381.2 1363 762 2 ENSG00000211983.2 AL158035.1 chr6 111909680 111909767 + miRNA NOVEL NA 88 88 1 ENSG00000112761.17 WISP3 chr6 112054072 112070969 + protein_coding KNOWN OTTHUMG00000185101.2 16898 3202 59 ENSG00000074935.12 TUBE1 chr6 112070777 112087529 - protein_coding KNOWN OTTHUMG00000015382.2 16753 6973 70 ENSG00000251767.1 RNU7-8P chr1 77420325 77420386 + snRNA KNOWN NA 62 62 1 ENSG00000203778.6 FAM229B chr6 112087599 112102790 + protein_coding KNOWN OTTHUMG00000015383.3 15192 2543 8 ENSG00000112769.17 LAMA4 chr6 112108760 112254939 - protein_coding KNOWN OTTHUMG00000015386.6 146180 11575 223 ENSG00000237234.5 RP1-142L7.5 chr6 112154765 112166476 + antisense NOVEL OTTHUMG00000015384.4 11712 1509 38 ENSG00000207044.1 RNU6-1226P chr6 112196440 112196546 - snRNA KNOWN NA 107 107 1 ENSG00000270661.1 RP1-142L7.9 chr6 112217640 112219570 - lincRNA NOVEL OTTHUMG00000185109.1 1931 1931 1 ENSG00000271208.1 RP1-142L7.8 chr6 112234165 112234758 - lincRNA NOVEL OTTHUMG00000185110.1 594 594 1 ENSG00000226440.6 RP11-506B6.6 chr6 112236093 112307009 + antisense NOVEL OTTHUMG00000015392.6 70917 4132 26 ENSG00000281613.1 RP11-506B6.7 chr6 112236806 112350094 + protein_coding NOVEL OTTHUMG00000189714.1 113289 1511 17 ENSG00000216663.3 RP11-506B6.5 chr6 112325753 112326749 - processed_pseudogene KNOWN OTTHUMG00000015391.1 997 997 1 ENSG00000251258.1 RFPL4B chr6 112347330 112351296 + protein_coding KNOWN OTTHUMG00000015390.2 3967 1900 3 ENSG00000036549.11 ZZZ3 chr1 77562416 77683419 - protein_coding KNOWN OTTHUMG00000009652.4 121004 9008 78 ENSG00000219773.1 RP11-506B6.3 chr6 112355841 112356714 - processed_pseudogene KNOWN OTTHUMG00000015389.1 874 874 1 ENSG00000215807.4 KRT18P65 chr6 112361437 112362722 - processed_pseudogene KNOWN OTTHUMG00000015388.1 1286 1286 1 ENSG00000266485.1 AL365214.1 chr6 112361848 112361939 - miRNA NOVEL NA 92 92 1 ENSG00000217770.1 FEM1AP3 chr6 112365704 112367444 - processed_pseudogene KNOWN OTTHUMG00000015387.1 1741 1741 1 ENSG00000232299.1 RP1-105O18.1 chr6 112476538 112481636 - lincRNA NOVEL OTTHUMG00000015393.1 5099 488 2 ENSG00000252215.1 AL357514.1 chr6 112532182 112532285 + miRNA NOVEL NA 104 104 1 ENSG00000225580.2 RP1-159M24.1 chr6 112616703 112617880 - processed_pseudogene KNOWN OTTHUMG00000015394.1 1178 1178 1 ENSG00000271498.1 RP11-505K1.1 chr6 112825939 112826470 + processed_pseudogene KNOWN OTTHUMG00000184400.1 532 532 1 ENSG00000201386.1 RNU6-1163P chr6 112971493 112971599 + snRNA KNOWN NA 107 107 1 ENSG00000218490.1 FCF1P10 chr6 113010937 113011415 + processed_pseudogene KNOWN OTTHUMG00000015395.1 479 479 1 ENSG00000251785.1 RNA5SP20 chr1 77614869 77614952 + rRNA KNOWN NA 84 84 1 ENSG00000216904.2 SOCS5P5 chr6 113222166 113224072 + processed_pseudogene KNOWN OTTHUMG00000015396.2 1907 1586 2 ENSG00000223811.1 RP11-437J19.1 chr6 113357003 113367944 - lincRNA NOVEL OTTHUMG00000015398.1 10942 507 3 ENSG00000232316.1 RP1-124C6.1 chr6 113428540 113433421 - lincRNA NOVEL OTTHUMG00000015399.1 4882 607 4 ENSG00000280723.1 AL021326.1 chr6 113428797 113428886 + miRNA NOVEL NA 90 90 1 ENSG00000222677.1 AL513123.1 chr6 113514987 113515083 + miRNA NOVEL NA 97 97 1 ENSG00000236347.1 RP11-346D19.1 chr6 113531118 113543793 + lincRNA NOVEL OTTHUMG00000015400.1 12676 597 3 ENSG00000218208.1 RP11-367G18.2 chr6 113581501 113581947 + processed_pseudogene KNOWN OTTHUMG00000015402.1 447 447 1 ENSG00000230943.1 RP11-367G18.1 chr6 113623535 113650074 - lincRNA NOVEL OTTHUMG00000015401.1 26540 637 6 ENSG00000221559.2 AL357519.1 chr6 113704833 113704923 + miRNA NOVEL NA 91 91 1 ENSG00000231912.2 RP1-249H1.2 chr6 113791829 113837368 - lincRNA NOVEL OTTHUMG00000015403.2 45540 375 2 ENSG00000235169.6 SMIM1 chr1 3772788 3775982 + protein_coding KNOWN OTTHUMG00000003505.2 3195 954 8 ENSG00000243437.3 RN7SL370P chr1 77645324 77645618 + misc_RNA KNOWN NA 295 295 1 ENSG00000219758.6 RP1-249H1.3 chr6 113839279 113839621 + processed_pseudogene KNOWN OTTHUMG00000015404.1 343 343 1 ENSG00000277443.1 MARCKS chr6 113857362 113863471 + protein_coding KNOWN OTTHUMG00000188327.1 6110 4275 7 ENSG00000227502.2 LINC01268 chr6 113868013 113873351 - lincRNA NOVEL OTTHUMG00000015405.3 5339 2755 3 ENSG00000175967.3 RP11-544L8__B.4 chr6 113904138 113921642 + antisense NOVEL OTTHUMG00000133566.1 17505 2255 4 ENSG00000196591.10 HDAC2 chr6 113933028 114011308 - protein_coding KNOWN OTTHUMG00000015411.3 78281 15461 107 ENSG00000228624.6 RP3-399L15.3 chr6 113969701 114471705 + antisense NOVEL OTTHUMG00000164691.4 502005 8063 73 ENSG00000216723.1 NUDT19P3 chr6 114019621 114020483 - processed_pseudogene KNOWN OTTHUMG00000015410.1 863 555 2 ENSG00000249853.6 HS3ST5 chr6 114055586 114343045 - protein_coding KNOWN OTTHUMG00000015412.3 287460 4104 9 ENSG00000216471.3 RPSAP43 chr6 114084168 114084792 - processed_pseudogene KNOWN OTTHUMG00000015413.1 625 625 1 ENSG00000212333.1 RNA5SP213 chr6 114220681 114220786 - rRNA KNOWN NA 106 106 1 ENSG00000077254.13 USP33 chr1 77695987 77759852 - protein_coding KNOWN OTTHUMG00000009651.4 63866 6918 165 ENSG00000221599.1 AL136446.1 chr6 114277385 114277478 - miRNA NOVEL NA 94 94 1 ENSG00000218089.1 DNAJA1P4 chr6 114349483 114350648 - processed_pseudogene KNOWN OTTHUMG00000016197.1 1166 1166 1 ENSG00000232395.1 RP3-399L15.1 chr6 114477350 114488752 - lincRNA NOVEL OTTHUMG00000015418.1 11403 943 4 ENSG00000226079.1 RP3-399L15.2 chr6 114523451 114535875 - lincRNA NOVEL OTTHUMG00000015419.1 12425 402 2 ENSG00000273817.1 AL590964.1 chr6 114778509 114778595 - miRNA NOVEL NA 87 87 1 ENSG00000251882.1 RNU6-475P chr6 114866873 114866976 - snRNA KNOWN NA 104 104 1 ENSG00000219619.2 RP11-126M14.1 chr6 115358498 115358752 - processed_pseudogene KNOWN OTTHUMG00000015420.2 255 255 1 ENSG00000228777.1 RP11-282C5.1 chr6 115633542 115634191 - lincRNA NOVEL OTTHUMG00000015421.1 650 283 2 ENSG00000111816.7 FRK chr6 115931149 116060758 - protein_coding KNOWN OTTHUMG00000015424.2 129610 13230 8 ENSG00000186743.2 TPI1P3 chr6 116038756 116039495 + processed_pseudogene KNOWN OTTHUMG00000015423.1 740 740 1 ENSG00000232672.1 RP4-706L14.2 chr1 77773865 77774864 - processed_pseudogene KNOWN OTTHUMG00000039957.1 1000 1000 1 ENSG00000178425.12 NT5DC1 chr6 116100849 116249497 + protein_coding KNOWN OTTHUMG00000015428.6 148649 7309 29 ENSG00000123500.8 COL10A1 chr6 116118923 116158747 - protein_coding KNOWN OTTHUMG00000015426.2 39825 3816 10 ENSG00000218428.1 NIP7P3 chr6 116137058 116137572 - processed_pseudogene KNOWN OTTHUMG00000015425.1 515 515 1 ENSG00000236326.1 RP3-486I3.5 chr6 116244187 116244728 - antisense NOVEL OTTHUMG00000015431.1 542 421 2 ENSG00000187189.10 TSPYL4 chr6 116249961 116254140 - protein_coding KNOWN OTTHUMG00000015429.2 4180 4180 1 ENSG00000111817.15 DSE chr6 116254173 116444860 + protein_coding KNOWN OTTHUMG00000015434.5 190688 15016 30 ENSG00000237021.2 RP3-486I3.7 chr6 116254207 116256743 + lincRNA NOVEL OTTHUMG00000015433.2 2537 2081 2 ENSG00000233558.1 RP3-486I3.4 chr6 116258493 116259115 - processed_pseudogene KNOWN OTTHUMG00000015430.1 623 623 1 ENSG00000189241.6 TSPYL1 chr6 116276578 116279903 - protein_coding KNOWN OTTHUMG00000015427.1 3326 3326 1 ENSG00000240050.4 RP1-93H18.1 chr6 116280199 116370273 + lincRNA NOVEL OTTHUMG00000015435.2 90075 1596 9 ENSG00000180488.13 FAM73A chr1 77779624 77879539 + protein_coding KNOWN OTTHUMG00000009766.4 99916 9594 41 ENSG00000217241.1 CBX3P9 chr6 116453014 116453565 - processed_pseudogene KNOWN OTTHUMG00000015436.1 552 552 1 ENSG00000218153.2 KRT18P22 chr6 116457323 116458669 - processed_pseudogene KNOWN OTTHUMG00000015437.2 1347 1347 1 ENSG00000265516.1 Z84488.1 chr6 116457732 116457822 - miRNA NOVEL NA 91 91 1 ENSG00000244158.1 RP1-93H18.6 chr6 116460739 116463692 - antisense NOVEL OTTHUMG00000159342.1 2954 530 2 ENSG00000188820.11 FAM26F chr6 116461370 116463779 + protein_coding KNOWN OTTHUMG00000015438.2 2410 1194 7 ENSG00000234117.2 RP11-259P20.1 chr6 116492297 116497099 + antisense NOVEL OTTHUMG00000015439.2 4803 737 3 ENSG00000173626.8 TRAPPC3L chr6 116494989 116545610 - protein_coding KNOWN OTTHUMG00000015440.3 50622 2757 12 ENSG00000178033.5 FAM26E chr6 116511646 116524792 + protein_coding KNOWN OTTHUMG00000015442.1 13147 9784 2 ENSG00000164451.12 FAM26D chr6 116529013 116558868 + protein_coding KNOWN OTTHUMG00000015443.5 29856 1932 16 ENSG00000111832.11 RWDD1 chr6 116571367 116597675 + protein_coding KNOWN OTTHUMG00000015441.3 26309 5909 36 ENSG00000222849.1 RNA5SP21 chr1 77779904 77779999 + rRNA KNOWN NA 96 96 1 ENSG00000111834.11 RSPH4A chr6 116616479 116632985 + protein_coding KNOWN OTTHUMG00000015444.1 16507 2840 16 ENSG00000153975.8 ZUFSP chr6 116635618 116668794 - protein_coding KNOWN OTTHUMG00000015445.1 33177 2656 24 ENSG00000196911.8 KPNA5 chr6 116681187 116741866 + protein_coding KNOWN OTTHUMG00000015448.2 60680 5556 38 ENSG00000183807.7 FAM162B chr6 116752197 116765723 - protein_coding KNOWN OTTHUMG00000015446.2 13527 1036 4 ENSG00000173612.8 GPRC6A chr6 116792085 116829037 - protein_coding KNOWN OTTHUMG00000015447.2 36953 2862 17 ENSG00000185002.8 RFX6 chr6 116877212 116932163 + protein_coding KNOWN OTTHUMG00000015449.4 54952 4093 40 ENSG00000217089.1 RPS29P13 chr6 117048670 117048838 - processed_pseudogene KNOWN OTTHUMG00000015450.1 169 169 1 ENSG00000200248.1 RNA5SP214 chr6 117060682 117060799 + rRNA KNOWN NA 118 118 1 ENSG00000170162.12 VGLL2 chr6 117265558 117273565 + protein_coding KNOWN OTTHUMG00000015451.2 8008 2231 7 ENSG00000047936.9 ROS1 chr6 117288300 117425855 - protein_coding KNOWN OTTHUMG00000016188.1 137556 7856 90 ENSG00000219201.4 RP11-181C21.4 chr1 77810861 77811781 - processed_pseudogene KNOWN OTTHUMG00000040532.2 921 921 1 ENSG00000251814.1 RN7SKP18 chr6 117299364 117299638 + misc_RNA KNOWN NA 275 275 1 ENSG00000222713.1 RN7SKP51 chr6 117301455 117301758 + misc_RNA KNOWN NA 304 304 1 ENSG00000047932.12 GOPC chr6 117318211 117602542 - protein_coding KNOWN OTTHUMG00000015457.2 284332 5011 32 ENSG00000219703.1 RAP1BP3 chr6 117431591 117432442 + processed_pseudogene KNOWN OTTHUMG00000015452.2 852 549 2 ENSG00000281606.1 AL132671.1 chr6 117445390 117445441 + miRNA NOVEL NA 52 52 1 ENSG00000226181.1 RP1-92C8.3 chr6 117451130 117453525 - antisense NOVEL OTTHUMG00000015453.1 2396 308 2 ENSG00000164465.17 DCBLD1 chr6 117453817 117569858 + protein_coding KNOWN OTTHUMG00000015455.3 116042 6819 79 ENSG00000207461.1 RNU6-253P chr6 117457734 117457838 - snRNA KNOWN NA 105 105 1 ENSG00000218233.1 NEPNP chr6 117633706 117645087 + unitary_pseudogene KNOWN OTTHUMG00000015456.1 11382 1371 2 ENSG00000153989.7 NUS1 chr6 117675502 117710640 + protein_coding KNOWN OTTHUMG00000015458.1 35139 4676 5 ENSG00000235613.2 NSRP1P1 chr1 77847110 77848802 + processed_pseudogene KNOWN OTTHUMG00000040562.2 1693 1693 1 ENSG00000196376.9 SLC35F1 chr6 117907526 118317676 + protein_coding KNOWN OTTHUMG00000015460.2 410151 4855 15 ENSG00000230202.1 RP11-632C17__A.1 chr6 117998975 117999448 + processed_pseudogene KNOWN OTTHUMG00000015459.2 474 474 1 ENSG00000216809.1 RP11-57K17.1 chr6 118452469 118454992 - processed_pseudogene KNOWN OTTHUMG00000015461.1 2524 2524 1 ENSG00000111860.12 CEP85L chr6 118460772 118710075 - protein_coding KNOWN OTTHUMG00000015465.4 249304 9462 70 ENSG00000169075.7 RP3-509L4.3 chr6 118501430 118502906 + processed_pseudogene KNOWN OTTHUMG00000015463.1 1477 1477 1 ENSG00000198523.5 PLN chr6 118548298 118560730 + protein_coding KNOWN OTTHUMG00000015462.1 12433 2001 2 ENSG00000217330.1 SSXP10 chr6 118589070 118589634 + processed_pseudogene KNOWN OTTHUMG00000016373.1 565 565 1 ENSG00000225549.3 RP11-210H10__A.1 chr6 118757518 118783420 + transcribed_processed_pseudogene KNOWN OTTHUMG00000015466.2 25903 1179 4 ENSG00000111877.16 MCM9 chr6 118813442 118935162 - protein_coding KNOWN OTTHUMG00000015468.4 121721 12496 52 ENSG00000111875.7 ASF1A chr6 118894220 118909167 + protein_coding KNOWN OTTHUMG00000015470.3 14948 2517 6 ENSG00000232015.2 HSPE1P25 chr1 77853355 77853893 + processed_pseudogene KNOWN OTTHUMG00000040563.2 539 251 2 ENSG00000253194.1 RP11-351A11.1 chr6 118934785 119031541 + antisense NOVEL OTTHUMG00000164916.1 96757 471 3 ENSG00000111879.17 FAM184A chr6 118959763 119149387 - protein_coding KNOWN OTTHUMG00000015471.4 189625 7791 134 ENSG00000222649.1 Y_RNA chr6 119057880 119057974 + misc_RNA NOVEL NA 95 95 1 ENSG00000207982.1 MIR548B chr6 119069047 119069143 - miRNA KNOWN NA 97 97 1 ENSG00000220139.1 RP3-354N19.1 chr6 119159297 119159476 + processed_pseudogene KNOWN OTTHUMG00000016148.1 180 180 1 ENSG00000111885.6 MAN1A1 chr6 119177209 119349761 - protein_coding KNOWN OTTHUMG00000015472.1 172553 5014 13 ENSG00000216316.1 RP3-354N19.3 chr6 119269133 119269714 - processed_pseudogene KNOWN OTTHUMG00000016149.1 582 582 1 ENSG00000200732.1 RNU6-194P chr6 119327281 119327385 + snRNA KNOWN NA 105 105 1 ENSG00000265725.1 MIR3144 chr6 120015179 120015257 + miRNA KNOWN NA 79 79 1 ENSG00000276617.1 AL590731.1 chr6 120411495 120411606 + miRNA NOVEL NA 112 112 1 ENSG00000235927.4 NEXN-AS1 chr1 77881348 77889539 - antisense KNOWN OTTHUMG00000040531.4 8192 2292 3 ENSG00000206857.1 RNU6-214P chr6 120526294 120526400 - snRNA KNOWN NA 107 107 1 ENSG00000200310.1 RNA5SP215 chr6 120686621 120686742 + rRNA KNOWN NA 122 122 1 ENSG00000216710.1 COX6A1P3 chr6 120781220 120781512 + processed_pseudogene KNOWN OTTHUMG00000015473.1 293 293 1 ENSG00000146350.12 TBC1D32 chr6 121079494 121334745 - protein_coding KNOWN OTTHUMG00000015474.4 255252 6912 139 ENSG00000206598.1 RNU6-1286P chr6 121354354 121354460 + snRNA KNOWN NA 107 107 1 ENSG00000207403.1 Y_RNA chr6 121378797 121378898 - misc_RNA NOVEL NA 102 102 1 ENSG00000220447.1 RP1-276J11.2 chr6 121381472 121381860 + processed_pseudogene KNOWN OTTHUMG00000015477.2 389 389 1 ENSG00000272714.1 RP1-276J11.3 chr6 121389324 121390357 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000015478.2 1034 381 2 ENSG00000152661.7 GJA1 chr6 121435692 121449727 + protein_coding KNOWN OTTHUMG00000015479.1 14036 3037 2 ENSG00000199458.1 RNU4-35P chr6 121453981 121454121 - snRNA KNOWN NA 141 141 1 ENSG00000162614.17 NEXN chr1 77888513 77943895 + protein_coding KNOWN OTTHUMG00000040533.3 55383 4436 65 ENSG00000219784.2 RP1-172I22.1 chr6 121478273 121479908 - processed_pseudogene KNOWN OTTHUMG00000015480.2 1636 664 4 ENSG00000201379.1 RNU4-76P chr6 121542486 121542626 - snRNA KNOWN NA 141 141 1 ENSG00000222659.1 RNU2-8P chr6 121580332 121580521 - snRNA KNOWN NA 190 190 1 ENSG00000220326.2 RP11-129H15.1 chr6 121641009 121641221 - processed_pseudogene KNOWN OTTHUMG00000015481.2 213 213 1 ENSG00000218180.2 SLC25A5P7 chr6 121653795 121654690 + processed_pseudogene KNOWN OTTHUMG00000015482.2 896 896 1 ENSG00000219135.1 RP11-129H15.3 chr6 121679972 121680459 - processed_pseudogene KNOWN OTTHUMG00000015483.2 488 488 1 ENSG00000217139.2 RP11-129H15.4 chr6 121682925 121684272 + processed_pseudogene KNOWN OTTHUMG00000015484.2 1348 1348 1 ENSG00000220184.2 HMGB3P18 chr6 121858179 121858768 - processed_pseudogene KNOWN OTTHUMG00000015485.2 590 590 1 ENSG00000199932.1 RNU1-18P chr6 122211648 122211811 + snRNA KNOWN NA 164 164 1 ENSG00000025156.11 HSF2 chr6 122399546 122433119 + protein_coding KNOWN OTTHUMG00000016216.2 33574 2702 30 ENSG00000130764.8 LRRC47 chr1 3778558 3796504 - protein_coding KNOWN OTTHUMG00000003506.3 17947 4516 16 ENSG00000162613.15 FUBP1 chr1 77944055 77979110 - protein_coding KNOWN OTTHUMG00000040799.5 35056 5666 102 ENSG00000279453.1 RP3-425C14.4 chr6 122436789 122439223 - TEC KNOWN OTTHUMG00000175939.1 2435 2435 1 ENSG00000111897.6 SERINC1 chr6 122443354 122471822 - protein_coding KNOWN OTTHUMG00000015487.2 28469 3137 10 ENSG00000275339.1 RP3-425C14.6 chr6 122454358 122454612 + processed_pseudogene KNOWN OTTHUMG00000187638.1 255 255 1 ENSG00000135549.13 PKIB chr6 122471917 122726373 + protein_coding KNOWN OTTHUMG00000015488.4 254457 3432 60 ENSG00000279114.1 RP3-425C14.5 chr6 122471923 122484161 + TEC KNOWN OTTHUMG00000185408.1 12239 6430 2 ENSG00000277408.1 RP3-425C14.7 chr6 122531123 122531436 - processed_pseudogene KNOWN OTTHUMG00000187639.1 314 314 1 ENSG00000272472.1 RP11-95G17.2 chr6 122643388 122644771 + sense_intronic NOVEL OTTHUMG00000185409.1 1384 1384 1 ENSG00000240606.3 RN7SL564P chr6 122745280 122745529 + misc_RNA KNOWN NA 250 250 1 ENSG00000164434.10 FABP7 chr6 122779475 122784074 + protein_coding KNOWN OTTHUMG00000015489.1 4600 2728 7 ENSG00000172594.11 SMPDL3A chr6 122789049 122809720 + protein_coding KNOWN OTTHUMG00000015490.1 20672 2349 18 ENSG00000162616.8 DNAJB4 chr1 77979175 78017964 + protein_coding KNOWN OTTHUMG00000040905.4 38790 3783 17 ENSG00000232362.1 ATP5LP2 chr6 122859678 122859988 - processed_pseudogene KNOWN OTTHUMG00000015491.1 311 311 1 ENSG00000146352.11 CLVS2 chr6 122995971 123072927 + protein_coding KNOWN OTTHUMG00000015495.3 76957 11485 11 ENSG00000276942.1 AL591428.1 chr6 123058834 123058920 - miRNA NOVEL NA 87 87 1 ENSG00000186439.11 TRDN chr6 123216339 123637093 - protein_coding KNOWN OTTHUMG00000015497.2 420755 6700 70 ENSG00000235535.6 RP11-532N4.2 chr6 123389421 123510241 + antisense NOVEL OTTHUMG00000015496.6 120821 5197 48 ENSG00000216015.1 AL354936.1 chr6 123740434 123740532 - miRNA NOVEL NA 99 99 1 ENSG00000188580.12 NKAIN2 chr6 123804141 124825657 + protein_coding KNOWN OTTHUMG00000015500.1 1021517 4108 26 ENSG00000237321.1 RP11-374A22.1 chr6 123823240 123829285 + sense_intronic NOVEL OTTHUMG00000015498.1 6046 649 2 ENSG00000236548.1 RNF217-AS1 chr6 124909093 124963039 - antisense NOVEL OTTHUMG00000015501.1 53947 4507 7 ENSG00000146373.15 RNF217 chr6 124962545 125092633 + protein_coding KNOWN OTTHUMG00000015504.5 130089 12779 56 ENSG00000137960.5 GIPC2 chr1 77979542 78138449 + protein_coding KNOWN OTTHUMG00000041145.1 158908 3973 9 ENSG00000111907.19 TPD52L1 chr6 125119049 125264407 + protein_coding KNOWN OTTHUMG00000015505.4 145359 7595 84 ENSG00000111906.16 HDDC2 chr6 125219962 125302078 - protein_coding KNOWN OTTHUMG00000015506.3 82117 5888 40 ENSG00000226409.1 RP11-735G4.1 chr6 125370211 125374324 - antisense NOVEL OTTHUMG00000015507.1 4114 821 3 ENSG00000228704.1 RP11-138M12.1 chr6 125425627 125445183 - lincRNA NOVEL OTTHUMG00000015508.1 19557 281 3 ENSG00000237742.5 RP11-624M8.1 chr6 125578558 125749190 - antisense NOVEL OTTHUMG00000015511.2 170633 3098 19 ENSG00000224506.2 RP1-293L8.2 chr6 125674353 125720218 + lincRNA NOVEL OTTHUMG00000015509.2 45866 2963 4 ENSG00000135547.7 HEY2 chr6 125747664 125761269 + protein_coding KNOWN OTTHUMG00000015512.1 13606 2741 10 ENSG00000111912.17 NCOA7 chr6 125781161 125932030 + protein_coding KNOWN OTTHUMG00000015513.5 150870 7739 82 ENSG00000232131.1 NCOA7-AS1 chr6 125797856 125818858 - antisense NOVEL OTTHUMG00000015510.1 21003 501 3 ENSG00000222445.1 RN7SKP56 chr6 125875168 125875498 + misc_RNA KNOWN NA 331 331 1 ENSG00000273338.1 RP11-386I14.4 chr1 78004346 78004554 - antisense NOVEL OTTHUMG00000186144.1 209 209 1 ENSG00000111911.6 HINT3 chr6 125956781 125980244 + protein_coding KNOWN OTTHUMG00000015514.2 23464 3314 5 ENSG00000251920.1 RNA5SP216 chr6 125979812 125979934 - rRNA KNOWN NA 123 123 1 ENSG00000066651.16 TRMT11 chr6 125986430 126039276 + protein_coding KNOWN OTTHUMG00000015515.8 52847 2690 91 ENSG00000231842.1 RP11-527F13.1 chr6 126177193 126202239 + lincRNA NOVEL OTTHUMG00000015516.1 25047 583 4 ENSG00000213133.4 PPP1R14BP5 chr6 126257921 126258355 - processed_pseudogene KNOWN OTTHUMG00000015517.2 435 435 1 ENSG00000203760.7 CENPW chr6 126340174 126348875 + protein_coding KNOWN OTTHUMG00000015518.1 8702 795 9 ENSG00000207632.1 MIR588 chr6 126484631 126484713 + miRNA KNOWN NA 83 83 1 ENSG00000201613.1 RNU6-200P chr6 126590287 126590393 - snRNA KNOWN NA 107 107 1 ENSG00000220548.3 VIM2P chr6 126602356 126603649 - processed_pseudogene KNOWN OTTHUMG00000015519.3 1294 1294 1 ENSG00000275953.1 RP11-753G20.2 chr6 126627484 126628570 - processed_pseudogene KNOWN OTTHUMG00000187640.1 1087 1087 1 ENSG00000213561.4 RP11-386I14.2 chr1 78043383 78044148 - processed_pseudogene KNOWN OTTHUMG00000041146.3 766 766 1 ENSG00000217325.2 PRELID1P1 chr6 126643488 126644390 + transcribed_processed_pseudogene KNOWN OTTHUMG00000015520.2 903 903 2 ENSG00000217404.2 RPS4XP9 chr6 126683036 126683847 + processed_pseudogene KNOWN OTTHUMG00000016146.2 812 780 2 ENSG00000146374.12 RSPO3 chr6 127118604 127197765 + protein_coding KNOWN OTTHUMG00000015521.1 79162 3179 15 ENSG00000118518.14 RNF146 chr6 127266610 127288567 + protein_coding KNOWN OTTHUMG00000015522.2 21958 3508 60 ENSG00000093144.17 ECHDC1 chr6 127288710 127343609 - protein_coding KNOWN OTTHUMG00000015523.4 54900 5678 116 ENSG00000251768.1 RNA5SP217 chr6 127317883 127317973 - rRNA KNOWN NA 91 91 1 ENSG00000213131.3 YWHAZP4 chr6 127355756 127356789 + processed_pseudogene KNOWN OTTHUMG00000015524.2 1034 708 2 ENSG00000220744.1 RPL5P18 chr6 127362513 127363403 + processed_pseudogene KNOWN OTTHUMG00000015525.1 891 891 1 ENSG00000220522.2 RP1-177A13.1 chr6 127416535 127416952 - processed_pseudogene KNOWN OTTHUMG00000015526.2 418 418 1 ENSG00000220694.2 RP3-403A15.1 chr6 127435636 127436189 + processed_pseudogene KNOWN OTTHUMG00000015527.2 554 554 1 ENSG00000251958.1 RNU6-1102P chr1 78088988 78089083 - snRNA KNOWN NA 96 96 1 ENSG00000255330.7 SOGA3 chr6 127438406 127519355 - protein_coding NOVEL OTTHUMG00000015528.7 80950 11818 38 ENSG00000189367.13 KIAA0408 chr6 127440343 127459391 - protein_coding KNOWN OTTHUMG00000166439.2 19049 7229 20 ENSG00000214338.9 SOGA3 chr6 127472794 127519191 - protein_coding KNOWN OTTHUMG00000166438.1 46398 4325 17 ENSG00000184530.8 C6orf58 chr6 127519455 127591817 + protein_coding KNOWN OTTHUMG00000015530.1 72363 1530 11 ENSG00000219284.2 RP11-151M7.1 chr6 127632958 127635321 - unprocessed_pseudogene KNOWN OTTHUMG00000015531.2 2364 352 3 ENSG00000218187.2 RP11-325O24.1 chr6 127654860 127655278 - processed_pseudogene KNOWN OTTHUMG00000015532.2 419 419 1 ENSG00000260212.1 RP11-325O24.5 chr6 127659424 127660338 + unprocessed_pseudogene KNOWN OTTHUMG00000177314.1 915 465 2 ENSG00000219699.2 RP11-325O24.2 chr6 127659690 127660579 - unprocessed_pseudogene KNOWN OTTHUMG00000015533.2 890 422 2 ENSG00000281248.1 RP11-325O24.6 chr6 127664554 127681555 + lincRNA NOVEL OTTHUMG00000190264.1 17002 625 4 ENSG00000172673.9 THEMIS chr6 127708072 127918631 - protein_coding KNOWN OTTHUMG00000015534.3 210560 4309 35 ENSG00000213560.4 RP11-386I14.3 chr1 78091499 78092054 + processed_pseudogene KNOWN OTTHUMG00000041147.2 556 556 1 ENSG00000274493.1 MRPS17P5 chr6 127909833 127910052 + processed_pseudogene KNOWN OTTHUMG00000187641.1 220 220 1 ENSG00000152894.13 PTPRK chr6 127968779 128520674 - protein_coding KNOWN OTTHUMG00000015536.9 551896 9000 303 ENSG00000227945.1 RP11-103C16.2 chr6 128027886 128085248 + antisense NOVEL OTTHUMG00000015535.1 57363 752 5 ENSG00000224733.1 RP1-86D1.5 chr6 128500527 128501176 + antisense NOVEL OTTHUMG00000015540.1 650 549 2 ENSG00000273790.2 AL137006.1 chr6 128556485 128556566 - miRNA NOVEL NA 82 82 1 ENSG00000213130.3 EEF1DP5 chr6 128580113 128580884 - processed_pseudogene KNOWN OTTHUMG00000015541.1 772 772 1 ENSG00000206982.1 Y_RNA chr6 128584390 128584491 + misc_RNA NOVEL NA 102 102 1 ENSG00000220110.1 RP1-6P5.2 chr6 128639188 128639653 - processed_pseudogene KNOWN OTTHUMG00000015542.1 466 466 1 ENSG00000202200.1 Y_RNA chr6 128761717 128761808 - misc_RNA NOVEL NA 92 92 1 ENSG00000196569.10 LAMA2 chr6 128883141 129516569 + protein_coding KNOWN OTTHUMG00000015545.1 633429 10094 203 ENSG00000202263.1 RNA5SP22 chr1 78094807 78094915 - rRNA KNOWN NA 109 109 1 ENSG00000220884.2 MESTP1 chr6 128928995 128929988 - processed_pseudogene KNOWN OTTHUMG00000015543.2 994 994 1 ENSG00000219642.2 BMPR1APS1 chr6 129157523 129159120 - processed_pseudogene KNOWN OTTHUMG00000015544.2 1598 1598 1 ENSG00000252554.1 RNU6-861P chr6 129436875 129436980 - snRNA KNOWN NA 106 106 1 ENSG00000233351.1 RP1-69D17.3 chr6 129479615 129481410 - antisense NOVEL OTTHUMG00000015546.1 1796 391 2 ENSG00000226149.4 RP1-69D17.4 chr6 129526626 129552587 - lincRNA NOVEL OTTHUMG00000015548.1 25962 864 10 ENSG00000146376.9 ARHGAP18 chr6 129576132 129710225 - protein_coding KNOWN OTTHUMG00000015547.2 134094 4640 23 ENSG00000276301.2 Z97352.1 chr6 129747737 129747819 + miRNA NOVEL NA 83 83 1 ENSG00000218689.2 RPL5P21 chr6 129756298 129757112 - processed_pseudogene KNOWN OTTHUMG00000015549.2 815 815 1 ENSG00000219666.2 RP11-174C7.1 chr6 129783769 129784045 - processed_pseudogene KNOWN OTTHUMG00000015550.3 277 277 1 ENSG00000218725.2 B3GALNT2P1 chr6 129800908 129802214 + processed_pseudogene KNOWN OTTHUMG00000015551.2 1307 1295 2 ENSG00000233333.2 RNFT1P2 chr1 78170481 78171237 - processed_pseudogene KNOWN OTTHUMG00000041117.2 757 757 1 ENSG00000219302.2 RP11-174C7.3 chr6 129819637 129820170 - processed_pseudogene KNOWN OTTHUMG00000015552.2 534 534 1 ENSG00000203756.6 TMEM244 chr6 129831244 129861547 - protein_coding KNOWN OTTHUMG00000015553.1 30304 670 11 ENSG00000198945.6 L3MBTL3 chr6 130013699 130141451 + protein_coding KNOWN OTTHUMG00000015554.4 127753 5113 159 ENSG00000227678.6 RP11-73O6.3 chr6 130133410 130146179 - antisense NOVEL OTTHUMG00000015555.4 12770 2906 20 ENSG00000164483.15 SAMD3 chr6 130144315 130365425 - protein_coding KNOWN OTTHUMG00000015556.6 221111 6903 106 ENSG00000164484.10 TMEM200A chr6 130365734 130443063 + protein_coding KNOWN OTTHUMG00000015557.1 77330 6137 9 ENSG00000266556.1 AL137251.1 chr6 130434265 130434353 + miRNA NOVEL NA 89 89 1 ENSG00000202438.1 Y_RNA chr6 130573996 130574112 - misc_RNA NOVEL NA 117 117 1 ENSG00000229923.2 RP11-102N11.1 chr6 130697312 130697778 + lincRNA NOVEL OTTHUMG00000015558.2 467 334 2 ENSG00000256162.2 SMLR1 chr6 130827406 130837135 + protein_coding KNOWN OTTHUMG00000176259.1 9730 2512 2 ENSG00000237413.4 MGC27382 chr1 78229599 78369464 + processed_transcript NOVEL OTTHUMG00000041107.1 139866 2481 12 ENSG00000079819.15 EPB41L2 chr6 130839347 131063322 - protein_coding KNOWN OTTHUMG00000015560.7 223976 10247 322 ENSG00000118507.14 AKAP7 chr6 131135666 131283535 + protein_coding KNOWN OTTHUMG00000015563.3 147870 4394 45 ENSG00000218857.1 RP1-209B5.2 chr6 131184325 131185486 - processed_pseudogene KNOWN OTTHUMG00000015562.1 1162 1162 1 ENSG00000219776.2 RPL21P67 chr6 131469059 131469536 + processed_pseudogene KNOWN OTTHUMG00000015564.2 478 478 1 ENSG00000118520.12 ARG1 chr6 131573144 131584332 + protein_coding KNOWN OTTHUMG00000015566.2 11189 1965 29 ENSG00000112282.16 MED23 chr6 131573966 131628229 - protein_coding KNOWN OTTHUMG00000015565.1 54264 7412 168 ENSG00000154269.13 ENPP3 chr6 131628442 131747418 + protein_coding KNOWN OTTHUMG00000016292.6 118977 3885 103 ENSG00000252560.1 RNU4-18P chr6 131642818 131642966 - snRNA KNOWN NA 149 149 1 ENSG00000180658.3 OR2A4 chr6 131700469 131701401 - protein_coding KNOWN OTTHUMG00000016316.2 933 933 1 ENSG00000236761.5 CTAGE9 chr6 131708684 131711017 - protein_coding KNOWN OTTHUMG00000047966.1 2334 2334 1 ENSG00000266075.2 RN7SL574P chr1 3782815 3783111 + misc_RNA KNOWN NA 297 297 1 ENSG00000122420.8 PTGFR chr1 78303884 78539749 + protein_coding KNOWN OTTHUMG00000009644.6 235866 4714 16 ENSG00000216917.2 RP5-988G15.1 chr6 131780721 131781312 - processed_pseudogene KNOWN OTTHUMG00000015567.3 592 592 1 ENSG00000266807.1 MIR548H5 chr6 131792172 131792231 + miRNA KNOWN NA 60 60 1 ENSG00000197594.10 ENPP1 chr6 131808016 131895155 + protein_coding KNOWN OTTHUMG00000015572.5 87140 8294 64 ENSG00000219532.2 RP3-323K23.3 chr6 131819803 131820091 - processed_pseudogene KNOWN OTTHUMG00000015570.2 289 289 1 ENSG00000200895.1 RN7SKP245 chr6 131820334 131820653 + misc_RNA KNOWN NA 320 320 1 ENSG00000237115.2 RP1-131F15.2 chr6 131825981 131828413 - processed_pseudogene KNOWN OTTHUMG00000015571.2 2433 2433 1 ENSG00000236673.4 RP11-69I8.2 chr6 131901963 131920565 + lincRNA NOVEL OTTHUMG00000055854.2 18603 3017 7 ENSG00000280058.1 RP1-131F15.3 chr6 131910191 131911527 + TEC KNOWN OTTHUMG00000185359.1 1337 1337 1 ENSG00000118523.5 CTGF chr6 131948176 131951373 - protein_coding KNOWN OTTHUMG00000015573.2 3198 2339 5 ENSG00000227220.1 RP11-69I8.3 chr6 131950946 132077393 + antisense NOVEL OTTHUMG00000150056.1 126448 495 2 ENSG00000227556.1 RP11-472F19.1 chr1 78317157 78317263 - unprocessed_pseudogene KNOWN OTTHUMG00000041106.1 107 107 1 ENSG00000236166.1 RP3-523C21.2 chr6 132085084 132099279 + lincRNA NOVEL OTTHUMG00000055852.2 14196 746 4 ENSG00000265669.1 MIR548AJ1 chr6 132115192 132115263 - miRNA KNOWN NA 72 72 1 ENSG00000280155.1 RP3-523C21.3 chr6 132130252 132131795 - TEC KNOWN OTTHUMG00000175941.1 1544 1544 1 ENSG00000228495.1 LINC01013 chr6 132131915 132169374 + lincRNA NOVEL OTTHUMG00000015574.3 37460 4206 13 ENSG00000223912.1 EEF1A1P36 chr6 132271982 132273332 + processed_pseudogene KNOWN OTTHUMG00000016340.2 1351 1351 1 ENSG00000079931.13 MOXD1 chr6 132296055 132401545 - protein_coding KNOWN OTTHUMG00000055853.4 105491 5293 30 ENSG00000079950.12 STX7 chr6 132445867 132513198 - protein_coding KNOWN OTTHUMG00000015577.2 67332 16387 30 ENSG00000225343.1 RPL21P66 chr6 132518830 132519295 - processed_pseudogene KNOWN OTTHUMG00000015580.2 466 466 1 ENSG00000237110.2 TAAR9 chr6 132538290 132539336 + protein_coding KNOWN OTTHUMG00000015578.4 1047 1047 1 ENSG00000146385.1 TAAR8 chr6 132552693 132553721 + protein_coding KNOWN OTTHUMG00000015586.1 1029 1029 1 ENSG00000212308.1 RNA5SP23 chr1 78375164 78375268 - rRNA KNOWN NA 105 105 1 ENSG00000235998.1 TAAR7P chr6 132559024 132559265 + unitary_pseudogene KNOWN OTTHUMG00000154716.1 242 242 1 ENSG00000146383.7 TAAR6 chr6 132570322 132571359 + protein_coding KNOWN OTTHUMG00000015579.1 1038 1038 1 ENSG00000135569.4 TAAR5 chr6 132588673 132589686 - protein_coding KNOWN OTTHUMG00000015581.1 1014 1014 1 ENSG00000237449.1 TAAR4P chr6 132594398 132595436 - unitary_pseudogene KNOWN OTTHUMG00000015582.1 1039 1039 1 ENSG00000179073.6 TAAR3 chr6 132608225 132609302 - unitary_pseudogene KNOWN OTTHUMG00000015584.3 1078 1078 2 ENSG00000146378.6 TAAR2 chr6 132617022 132624275 - protein_coding KNOWN OTTHUMG00000015585.2 7254 1217 3 ENSG00000146399.1 TAAR1 chr6 132644984 132646003 - protein_coding KNOWN OTTHUMG00000015583.1 1020 1020 1 ENSG00000218194.1 HLFP1 chr6 132674885 132675383 + processed_pseudogene KNOWN OTTHUMG00000015590.1 499 499 1 ENSG00000112299.7 VNN1 chr6 132681590 132714049 - protein_coding KNOWN OTTHUMG00000015587.1 32460 3106 7 ENSG00000218991.1 CCNG1P1 chr6 132698783 132699667 + processed_pseudogene KNOWN OTTHUMG00000015591.1 885 885 1 ENSG00000137959.14 IFI44L chr1 78619922 78646145 + protein_coding KNOWN OTTHUMG00000009724.4 26224 10240 53 ENSG00000093134.12 VNN3 chr6 132722787 132734765 - protein_coding KNOWN OTTHUMG00000015589.7 11979 3846 80 ENSG00000112303.12 VNN2 chr6 132743870 132763459 - protein_coding KNOWN OTTHUMG00000015588.5 19590 2633 93 ENSG00000234484.1 RP1-55C23.7 chr6 132752675 132753951 + antisense NOVEL OTTHUMG00000015592.1 1277 581 2 ENSG00000271488.1 RBM11P1 chr6 132764660 132765458 + processed_pseudogene KNOWN OTTHUMG00000184398.1 799 799 1 ENSG00000146409.9 SLC18B1 chr6 132769370 132798553 - protein_coding KNOWN OTTHUMG00000015595.2 29184 2444 24 ENSG00000112306.7 RPS12 chr6 132814441 132817564 + protein_coding KNOWN OTTHUMG00000015593.3 3124 767 12 ENSG00000206754.1 SNORD101 chr6 132815307 132815379 + snoRNA KNOWN NA 73 73 1 ENSG00000221500.1 SNORD100 chr6 132816802 132816877 + snoRNA KNOWN NA 76 76 1 ENSG00000200534.1 SNORA33 chr6 132817219 132817348 + snoRNA KNOWN NA 130 130 1 ENSG00000220557.1 HMGB1P13 chr6 132868218 132868859 - processed_pseudogene KNOWN OTTHUMG00000015594.1 642 642 1 ENSG00000137965.9 IFI44 chr1 78649796 78664078 + protein_coding KNOWN OTTHUMG00000009723.1 14283 2038 47 ENSG00000279960.1 RP5-1181K21.4 chr6 132891924 132893819 + TEC KNOWN OTTHUMG00000175942.1 1896 1896 1 ENSG00000213122.4 RPL23AP46 chr6 132997551 132998040 - processed_pseudogene KNOWN OTTHUMG00000015596.2 490 490 1 ENSG00000231023.5 LINC00326 chr6 133088080 133106578 + lincRNA NOVEL OTTHUMG00000015597.2 18499 2515 10 ENSG00000220113.2 MTCYBP4 chr6 133150568 133150816 + processed_pseudogene KNOWN OTTHUMG00000015598.2 249 249 1 ENSG00000112319.16 EYA4 chr6 133240598 133532120 + protein_coding KNOWN OTTHUMG00000015602.4 291523 8968 197 ENSG00000223542.1 RP1-283K11.3 chr6 133435077 133439464 - antisense NOVEL OTTHUMG00000015601.1 4388 631 2 ENSG00000234567.1 RP1-283K11.2 chr6 133452857 133456605 - antisense NOVEL OTTHUMG00000015600.1 3749 317 3 ENSG00000227954.5 TARID chr6 133502252 133892802 - antisense KNOWN OTTHUMG00000015607.3 390551 7862 45 ENSG00000238059.1 HSPE1P21 chr6 133510386 133510693 - processed_pseudogene KNOWN OTTHUMG00000015603.1 308 308 1 ENSG00000272428.1 RP11-704J17.5 chr6 133540784 133541174 + lincRNA NOVEL OTTHUMG00000185821.1 391 391 1 ENSG00000238015.2 RP4-641G12.3 chr1 78666272 78666695 + processed_pseudogene KNOWN OTTHUMG00000009722.2 424 424 1 ENSG00000218213.1 FTH1P26 chr6 133676729 133677429 - processed_pseudogene KNOWN OTTHUMG00000015605.1 701 701 1 ENSG00000223586.4 LINC01312 chr6 133821147 133851800 + lincRNA NOVEL OTTHUMG00000015606.1 30654 1364 6 ENSG00000118526.6 TCF21 chr6 133889138 133895553 + protein_coding KNOWN OTTHUMG00000015608.2 6416 4551 5 ENSG00000028839.8 TBPL1 chr6 133952170 133990432 + protein_coding KNOWN OTTHUMG00000015609.4 38263 5039 39 ENSG00000146411.5 SLC2A12 chr6 133988697 134052636 - protein_coding KNOWN OTTHUMG00000015611.1 63940 4468 5 ENSG00000278744.1 CTA-444M12.3 chr6 134009033 134009218 + processed_pseudogene KNOWN OTTHUMG00000187662.1 186 186 1 ENSG00000216753.3 HMGA1P7 chr6 134115235 134115736 - processed_pseudogene KNOWN OTTHUMG00000015610.3 502 502 1 ENSG00000266875.2 RN7SL408P chr6 134133573 134133868 + misc_RNA KNOWN NA 296 296 1 ENSG00000118515.10 SGK1 chr6 134169246 134318112 - protein_coding KNOWN OTTHUMG00000015613.4 148867 9992 174 ENSG00000276703.1 RP1-188K17.2 chr6 134211450 134211527 + processed_pseudogene KNOWN OTTHUMG00000187663.1 78 78 1 ENSG00000221683.1 AC104837.1 chr1 78687060 78687160 + miRNA NOVEL NA 101 101 1 ENSG00000200058.1 RNA5SP218 chr6 134257035 134257143 + rRNA KNOWN NA 109 109 1 ENSG00000201309.1 Y_RNA chr6 134283092 134283193 + misc_RNA NOVEL NA 102 102 1 ENSG00000220378.3 KRT8P42 chr6 134296997 134298695 - processed_pseudogene KNOWN OTTHUMG00000015612.3 1699 1399 2 ENSG00000213118.4 CHCHD2P4 chr6 134393142 134393900 - processed_pseudogene KNOWN OTTHUMG00000015614.2 759 434 2 ENSG00000231971.4 RP11-557H15.3 chr6 134428240 134520585 - lincRNA NOVEL OTTHUMG00000015617.1 92346 1731 8 ENSG00000236700.4 LINC01010 chr6 134437716 134504581 + lincRNA NOVEL OTTHUMG00000015616.1 66866 2583 8 ENSG00000232310.5 RP11-557H15.4 chr6 134525314 134659836 - lincRNA NOVEL OTTHUMG00000015620.3 134523 1404 16 ENSG00000218772.2 FAM8A6P chr6 134603564 134604698 - processed_pseudogene KNOWN OTTHUMG00000015615.3 1135 1135 1 ENSG00000229722.1 RP11-557H15.5 chr6 134606299 134609437 - lincRNA NOVEL OTTHUMG00000015618.1 3139 479 2 ENSG00000227723.1 CTA-31J9.2 chr6 134636489 134642495 + lincRNA NOVEL OTTHUMG00000015619.1 6007 370 3 ENSG00000235400.1 RP4-641G12.4 chr1 78749073 78750659 + processed_pseudogene KNOWN OTTHUMG00000009739.1 1587 1587 1 ENSG00000236389.1 RP1-287H17.1 chr6 134706060 134707349 - lincRNA NOVEL OTTHUMG00000015621.1 1290 929 2 ENSG00000277231.1 AL121970.1 chr6 134715176 134715266 - miRNA NOVEL NA 91 91 1 ENSG00000213117.4 RP3-352A20.1 chr6 134897874 134898759 + processed_pseudogene KNOWN OTTHUMG00000015622.2 886 886 1 ENSG00000118514.12 ALDH8A1 chr6 134917390 134950122 - protein_coding KNOWN OTTHUMG00000015623.2 32733 2868 30 ENSG00000240056.2 RP11-349J5.2 chr6 134941392 134942450 + antisense NOVEL OTTHUMG00000015624.2 1059 288 2 ENSG00000112339.13 HBS1L chr6 134960378 135103056 - protein_coding KNOWN OTTHUMG00000015626.4 142679 11099 147 ENSG00000232876.1 CTA-212D2.2 chr6 135055033 135060550 + antisense NOVEL OTTHUMG00000015625.1 5518 790 2 ENSG00000118513.17 MYB chr6 135181315 135219173 + protein_coding KNOWN OTTHUMG00000015629.9 37859 5493 613 ENSG00000236703.1 MYB-AS1 chr6 135195083 135195995 - antisense NOVEL OTTHUMG00000015627.2 913 449 2 ENSG00000207689.1 MIR548A2 chr6 135239160 135239256 + miRNA KNOWN NA 97 97 1 ENSG00000162618.11 ELTD1 chr1 78889764 79006718 - protein_coding KNOWN OTTHUMG00000009738.1 116955 3527 21 ENSG00000224374.1 RP1-32B1.4 chr6 135259996 135260933 + antisense NOVEL OTTHUMG00000015628.1 938 216 2 ENSG00000135541.19 AHI1 chr6 135283532 135497776 - protein_coding KNOWN OTTHUMG00000015631.7 214245 8705 204 ENSG00000234084.1 RP3-388E23.2 chr6 135301568 135307158 + antisense NOVEL OTTHUMG00000015630.1 5591 577 3 ENSG00000201012.1 Y_RNA chr6 135474504 135474609 - misc_RNA NOVEL NA 106 106 1 ENSG00000231028.7 LINC00271 chr6 135497801 135716055 + lincRNA KNOWN OTTHUMG00000015632.2 218255 3825 26 ENSG00000226540.2 GAPDHP73 chr6 135619165 135620171 - processed_pseudogene KNOWN OTTHUMG00000015633.2 1007 1007 1 ENSG00000233534.1 RP1-38C16.2 chr6 135629405 135630268 - lincRNA NOVEL OTTHUMG00000015634.1 864 531 2 ENSG00000217482.2 HMGB1P17 chr6 135636086 135636713 - processed_pseudogene KNOWN OTTHUMG00000015635.2 628 628 1 ENSG00000236378.1 RP11-394G3.2 chr6 135807148 135808466 - lincRNA NOVEL OTTHUMG00000015637.1 1319 777 2 ENSG00000171408.12 PDE7B chr6 135851696 136195574 + protein_coding KNOWN OTTHUMG00000015641.1 343879 5946 29 ENSG00000230787.1 PSAT1P3 chr1 79054945 79056055 - processed_pseudogene KNOWN OTTHUMG00000009740.1 1111 1111 1 ENSG00000238921.2 AL360178.1 chr6 135914755 135914847 + miRNA NOVEL NA 93 93 1 ENSG00000222121.1 AL512290.1 chr6 135977811 135977903 - miRNA NOVEL NA 93 93 1 ENSG00000237596.5 RP13-143G15.4 chr6 135991936 136225751 - antisense NOVEL OTTHUMG00000015640.5 233816 6585 66 ENSG00000213111.5 COX5BP2 chr6 136034553 136034886 - transcribed_processed_pseudogene KNOWN OTTHUMG00000015638.3 334 334 1 ENSG00000277973.1 RP11-472E5.3 chr6 136206478 136206860 + processed_pseudogene KNOWN OTTHUMG00000187643.1 383 383 1 ENSG00000146410.10 MTFR2 chr6 136231024 136250335 - protein_coding KNOWN OTTHUMG00000015643.3 19312 2450 37 ENSG00000029363.14 BCLAF1 chr6 136256863 136289851 - protein_coding KNOWN OTTHUMG00000033323.5 32989 9297 186 ENSG00000216519.2 RP3-406A7.1 chr6 136317961 136318236 + processed_pseudogene KNOWN OTTHUMG00000016407.2 276 276 1 ENSG00000260418.1 RP3-406A7.7 chr6 136335714 136336087 - lincRNA NOVEL OTTHUMG00000175943.1 374 374 1 ENSG00000135525.17 MAP7 chr6 136342281 136550819 - protein_coding KNOWN OTTHUMG00000015646.3 208539 5447 156 ENSG00000272153.1 RP1-286D6.5 chr1 3785008 3785538 + antisense NOVEL OTTHUMG00000185643.1 531 531 1 ENSG00000266388.1 AC093430.1 chr1 79135133 79135226 - miRNA NOVEL NA 94 94 1 ENSG00000276943.1 AL023284.1 chr6 136343193 136343249 - miRNA NOVEL NA 57 57 1 ENSG00000220660.2 RP3-406A7.3 chr6 136364129 136365079 + transcribed_processed_pseudogene KNOWN OTTHUMG00000016410.2 951 833 3 ENSG00000216613.2 RP3-406A7.5 chr6 136419847 136420425 - processed_pseudogene KNOWN OTTHUMG00000015644.3 579 579 1 ENSG00000218424.2 NDUFS5P1 chr6 136475862 136476150 - processed_pseudogene KNOWN OTTHUMG00000016412.2 289 289 1 ENSG00000271765.1 7SK chr6 136545192 136545492 + misc_RNA NOVEL NA 301 301 1 ENSG00000272189.1 RP3-325F22.5 chr6 136550661 136552554 + antisense NOVEL OTTHUMG00000185823.1 1894 1894 1 ENSG00000197442.9 MAP3K5 chr6 136557047 136792518 - protein_coding KNOWN OTTHUMG00000015647.1 235472 5303 33 ENSG00000234263.1 RP3-325F22.3 chr6 136629172 136647999 + antisense NOVEL OTTHUMG00000015645.1 18828 505 3 ENSG00000212242.1 RNA5SP219 chr6 136630243 136630355 + rRNA KNOWN NA 113 113 1 ENSG00000112357.11 PEX7 chr6 136822564 136913937 + protein_coding KNOWN OTTHUMG00000015650.2 91374 1835 22 ENSG00000235011.2 RP4-726F1.1 chr1 79323769 79324863 + lincRNA NOVEL OTTHUMG00000009742.2 1095 355 2 ENSG00000277822.1 AL121933.1 chr6 136855349 136855457 - miRNA NOVEL NA 109 109 1 ENSG00000201807.1 SNORA27 chr6 136855698 136855831 - snoRNA NOVEL NA 134 134 1 ENSG00000213109.4 RP11-55K22.2 chr6 136900233 136901529 - transcribed_processed_pseudogene KNOWN OTTHUMG00000015648.2 1297 1297 2 ENSG00000182747.4 SLC35D3 chr6 136922264 136925639 + protein_coding KNOWN OTTHUMG00000015651.2 3376 2359 2 ENSG00000207247.1 Y_RNA chr6 136934765 136934866 + misc_RNA NOVEL NA 102 102 1 ENSG00000230350.1 RPL35AP3 chr6 136973930 136974217 - processed_pseudogene KNOWN OTTHUMG00000015649.2 288 288 1 ENSG00000225391.4 NHEG1 chr6 136982165 136993234 - lincRNA NOVEL OTTHUMG00000015652.1 11070 1357 6 ENSG00000235399.1 RP11-204P2.3 chr6 136995170 136999504 + antisense NOVEL OTTHUMG00000015653.1 4335 384 2 ENSG00000016402.11 IL20RA chr6 136999971 137045180 - protein_coding KNOWN OTTHUMG00000015654.1 45210 4730 34 ENSG00000164485.13 IL22RA2 chr6 137143820 137173648 - protein_coding KNOWN OTTHUMG00000015655.2 29829 2897 18 ENSG00000232676.1 ADH5P2 chr1 79521080 79522203 + processed_pseudogene KNOWN OTTHUMG00000009701.1 1124 1124 1 ENSG00000027697.11 IFNGR1 chr6 137197484 137219449 - protein_coding KNOWN OTTHUMG00000015656.2 21966 2571 27 ENSG00000177468.6 OLIG3 chr6 137492202 137494250 - protein_coding KNOWN OTTHUMG00000015657.1 2049 2049 1 ENSG00000213108.3 BTF3L4P3 chr6 137543897 137544372 - processed_pseudogene KNOWN OTTHUMG00000015658.1 476 476 1 ENSG00000230533.1 RP11-95M15.1 chr6 137673460 137674554 + lincRNA NOVEL OTTHUMG00000015659.1 1095 523 3 ENSG00000220412.1 RP11-95M15.2 chr6 137705423 137707201 - processed_pseudogene KNOWN OTTHUMG00000015660.1 1779 1779 1 ENSG00000251969.3 AL357060.1 chr6 137716950 137717079 + miRNA NOVEL NA 130 130 1 ENSG00000234956.4 RP11-356I2.1 chr6 137730170 137738983 - lincRNA NOVEL OTTHUMG00000015661.1 8814 737 5 ENSG00000207300.1 Y_RNA chr6 137784374 137784486 + misc_RNA NOVEL NA 113 113 1 ENSG00000237499.5 RP11-356I2.4 chr6 137823673 137868233 - antisense NOVEL OTTHUMG00000015663.3 44561 4088 18 ENSG00000118503.13 TNFAIP3 chr6 137867188 137883312 + protein_coding KNOWN OTTHUMG00000015664.1 16125 5051 69 ENSG00000235756.2 RP11-339A11.1 chr1 80092103 80093237 - processed_pseudogene KNOWN OTTHUMG00000009702.2 1135 1135 1 ENSG00000226004.1 RP11-10J5.1 chr6 137943079 137945802 - lincRNA NOVEL OTTHUMG00000015665.1 2724 573 2 ENSG00000229922.4 RP11-240M16.1 chr6 137945366 137972522 + lincRNA NOVEL OTTHUMG00000015667.1 27157 815 4 ENSG00000219463.1 RPSAP42 chr6 137995270 137996147 + processed_pseudogene KNOWN OTTHUMG00000015666.1 878 878 1 ENSG00000112378.11 PERP chr6 138088505 138107511 - protein_coding KNOWN OTTHUMG00000015668.2 19007 4290 3 ENSG00000112379.8 KIAA1244 chr6 138161921 138344663 + protein_coding KNOWN OTTHUMG00000015670.4 182743 14877 34 ENSG00000254440.3 PBOV1 chr6 138215986 138218491 - protein_coding KNOWN OTTHUMG00000167040.1 2506 2506 1 ENSG00000262543.1 RP3-422G23.4 chr6 138377905 138383075 + lincRNA NOVEL OTTHUMG00000172823.1 5171 855 2 ENSG00000218499.1 RP3-422G23.3 chr6 138393373 138393544 + processed_pseudogene KNOWN OTTHUMG00000015673.1 172 172 1 ENSG00000215878.3 MARCKSL1P2 chr6 138402585 138403560 - processed_pseudogene KNOWN OTTHUMG00000015672.2 976 976 1 ENSG00000051620.9 HEBP2 chr6 138403531 138422197 + protein_coding KNOWN OTTHUMG00000015671.3 18667 10356 15 ENSG00000260322.1 RP11-339A11.2 chr1 80114943 80116918 + lincRNA NOVEL OTTHUMG00000175855.1 1976 1976 1 ENSG00000135540.10 NHSL1 chr6 138422043 138692571 - protein_coding KNOWN OTTHUMG00000016321.2 270529 8741 40 ENSG00000266555.1 MIR3145 chr6 138435213 138435294 - miRNA KNOWN NA 82 82 1 ENSG00000274594.1 RP11-43P8.2 chr6 138464099 138464383 + processed_pseudogene KNOWN OTTHUMG00000187661.1 285 285 1 ENSG00000216802.1 RP11-390P2.2 chr6 138650226 138650973 - processed_pseudogene KNOWN OTTHUMG00000015675.1 748 748 1 ENSG00000225177.4 RP11-390P2.4 chr6 138692548 138697288 + antisense NOVEL OTTHUMG00000015677.1 4741 1220 11 ENSG00000279968.1 RP3-509I19.11 chr6 138725211 138773652 - protein_coding NOVEL OTTHUMG00000189248.2 48442 2993 9 ENSG00000024862.15 CCDC28A chr6 138773509 138793319 + protein_coding KNOWN OTTHUMG00000015683.3 19811 1507 25 ENSG00000203734.10 ECT2L chr6 138795926 138904070 + protein_coding KNOWN OTTHUMG00000015679.6 108145 4624 75 ENSG00000225415.2 RP3-509I19.1 chr6 138822747 138823799 + processed_pseudogene KNOWN OTTHUMG00000015678.1 1053 1053 1 ENSG00000206856.1 RNU6-427P chr6 138859027 138859133 - snRNA KNOWN NA 107 107 1 ENSG00000277670.1 RP11-339A11.3 chr1 80124004 80124361 + unprocessed_pseudogene KNOWN OTTHUMG00000187527.1 358 263 2 ENSG00000220600.2 RP3-509I19.6 chr6 138878899 138879407 - transcribed_processed_pseudogene KNOWN OTTHUMG00000015681.2 509 509 2 ENSG00000135597.17 REPS1 chr6 138903493 138988261 - protein_coding KNOWN OTTHUMG00000015685.5 84769 9602 215 ENSG00000146386.7 ABRACL chr6 139028682 139043302 + protein_coding KNOWN OTTHUMG00000015684.1 14621 1200 5 ENSG00000112406.4 HECA chr6 139135112 139180802 + protein_coding KNOWN OTTHUMG00000015686.1 45691 5614 4 ENSG00000231329.6 RP1-225E12.2 chr6 139144204 139239653 - antisense NOVEL OTTHUMG00000015687.3 95450 4685 51 ENSG00000272446.4 RP1-225E12.3 chr6 139159157 139277181 - processed_transcript NOVEL OTTHUMG00000185399.2 118025 1894 35 ENSG00000164440.13 TXLNB chr6 139240061 139292139 - protein_coding KNOWN OTTHUMG00000015688.1 52079 4937 13 ENSG00000226571.1 RP11-445F6.2 chr6 139271362 139287307 + antisense NOVEL OTTHUMG00000015689.1 15946 914 7 ENSG00000218565.2 RP11-12A2.1 chr6 139338018 139339580 + processed_pseudogene KNOWN OTTHUMG00000015692.3 1563 1473 2 ENSG00000164442.9 CITED2 chr6 139371807 139374620 - protein_coding KNOWN OTTHUMG00000015691.2 2814 2535 9 ENSG00000236407.1 HMGB1P18 chr1 80283352 80283970 + processed_pseudogene KNOWN OTTHUMG00000010771.1 619 619 1 ENSG00000238099.2 RP11-12A2.3 chr6 139468995 139474596 - lincRNA NOVEL OTTHUMG00000015693.2 5602 1690 4 ENSG00000219806.1 ATP5F1P6 chr6 139614438 139615204 - processed_pseudogene KNOWN OTTHUMG00000015695.1 767 767 1 ENSG00000205695.3 RP11-15H7.2 chr6 139659928 139661513 + processed_pseudogene KNOWN OTTHUMG00000015696.2 1586 1586 1 ENSG00000231426.4 RP5-899B16.1 chr6 139854850 139860151 + lincRNA NOVEL OTTHUMG00000015697.1 5302 1051 6 ENSG00000225148.1 RP5-899B16.2 chr6 139856104 139877391 - lincRNA NOVEL OTTHUMG00000015698.1 21288 786 2 ENSG00000236013.4 RP3-332B22.1 chr6 140067435 140093721 + lincRNA NOVEL OTTHUMG00000015699.1 26287 2058 8 ENSG00000252107.1 RNA5SP220 chr6 140158591 140158694 - rRNA KNOWN NA 104 104 1 ENSG00000263514.1 MIR3668 chr6 140205252 140205326 + miRNA KNOWN NA 75 75 1 ENSG00000221336.1 AL356137.1 chr6 140660623 140660713 - miRNA NOVEL NA 91 91 1 ENSG00000264390.1 MIR4465 chr6 140683814 140683883 + miRNA KNOWN NA 70 70 1 ENSG00000225598.1 RP11-339D23.1 chr1 80373364 80374621 - lincRNA NOVEL OTTHUMG00000009712.1 1258 580 2 ENSG00000217684.2 RPS3AP24 chr6 140761529 140762262 + processed_pseudogene KNOWN OTTHUMG00000015701.2 734 734 1 ENSG00000234147.1 RP3-460G2.2 chr6 140845958 140852924 - lincRNA NOVEL OTTHUMG00000015700.1 6967 453 2 ENSG00000216548.2 RP11-471B18.1 chr6 140922457 140922910 - processed_pseudogene KNOWN OTTHUMG00000015702.2 454 454 1 ENSG00000275138.1 RP11-432L12.1 chr6 141019788 141020026 - processed_pseudogene KNOWN OTTHUMG00000187723.1 239 239 1 ENSG00000259828.1 RP11-63E9.1 chr6 141447011 141451006 + lincRNA NOVEL OTTHUMG00000175944.1 3996 3996 1 ENSG00000222764.1 RN7SKP106 chr6 141486141 141486412 - misc_RNA KNOWN NA 272 272 1 ENSG00000218351.2 RPS3AP23 chr6 141635650 141636503 - transcribed_processed_pseudogene KNOWN OTTHUMG00000015703.2 854 854 2 ENSG00000135577.4 NMBR chr6 142058330 142088799 - protein_coding KNOWN OTTHUMG00000015704.1 30470 1576 6 ENSG00000270983.1 RP11-137J7.3 chr6 142062717 142063053 + processed_pseudogene KNOWN OTTHUMG00000184389.1 337 337 1 ENSG00000236822.1 RP11-137J7.2 chr6 142088233 142089219 + antisense NOVEL OTTHUMG00000015705.1 987 222 2 ENSG00000213559.4 HNRNPA1P64 chr1 80451083 80452004 - processed_pseudogene KNOWN OTTHUMG00000000524.2 922 922 1 ENSG00000203733.5 GJE1 chr6 142133090 142135151 + protein_coding KNOWN OTTHUMG00000015706.2 2062 916 3 ENSG00000009844.14 VTA1 chr6 142147162 142224689 + protein_coding KNOWN OTTHUMG00000015707.3 77528 7262 31 ENSG00000273631.1 AL033522.1 chr6 142183086 142183172 - miRNA NOVEL NA 87 87 1 ENSG00000237494.1 RP11-753B14.1 chr6 142251847 142259632 - lincRNA NOVEL OTTHUMG00000015708.1 7786 349 2 ENSG00000112414.13 GPR126 chr6 142301854 142446266 + protein_coding KNOWN OTTHUMG00000015709.4 144413 8473 139 ENSG00000236366.1 RP11-440G9.1 chr6 142526455 142637889 - lincRNA NOVEL OTTHUMG00000015712.1 111435 2293 3 ENSG00000233138.1 RP1-67K17.3 chr6 142748443 142753759 + antisense NOVEL OTTHUMG00000015715.1 5317 349 2 ENSG00000010818.7 HIVEP2 chr6 142751467 142945201 - protein_coding KNOWN OTTHUMG00000015713.1 193735 9774 30 ENSG00000237851.1 RP1-67K17.4 chr6 142788123 142794086 + lincRNA NOVEL OTTHUMG00000015714.1 5964 444 2 ENSG00000224460.1 RP11-439L18.2 chr6 142946047 142956698 - lincRNA NOVEL OTTHUMG00000015717.1 10652 402 2 ENSG00000227062.2 RP11-115A15.4 chr1 80464301 80464718 - processed_pseudogene KNOWN OTTHUMG00000000525.2 418 418 1 ENSG00000232618.1 RP11-439L18.1 chr6 142950211 142956646 + lincRNA NOVEL OTTHUMG00000015716.1 6436 554 3 ENSG00000229017.5 LINC01277 chr6 142966421 143038077 - lincRNA NOVEL OTTHUMG00000015718.2 71657 2484 6 ENSG00000227192.1 RP1-45I4.3 chr6 143039425 143042324 - lincRNA NOVEL OTTHUMG00000015720.1 2900 552 2 ENSG00000146416.15 AIG1 chr6 143060496 143340304 + protein_coding KNOWN OTTHUMG00000015721.6 279809 6016 50 ENSG00000225752.1 RP1-45I4.2 chr6 143094034 143099645 - antisense NOVEL OTTHUMG00000015719.1 5612 455 2 ENSG00000217495.2 RP1-95L4.2 chr6 143298770 143299554 - processed_pseudogene KNOWN OTTHUMG00000015722.2 785 785 1 ENSG00000216642.1 RP1-95L4.3 chr6 143327275 143327655 + processed_pseudogene KNOWN OTTHUMG00000015723.2 381 381 1 ENSG00000217648.1 RP1-95L4.4 chr6 143342246 143343383 + processed_pseudogene KNOWN OTTHUMG00000015724.1 1138 1138 1 ENSG00000270655.1 RP1-20N2.7 chr6 143386581 143387409 + processed_pseudogene KNOWN OTTHUMG00000184388.1 829 357 2 ENSG00000189007.14 ADAT2 chr6 143422832 143450673 - protein_coding KNOWN OTTHUMG00000015725.2 27842 7175 14 ENSG00000116198.11 CEP104 chr1 3812081 3857214 - protein_coding KNOWN OTTHUMG00000003507.4 45134 7876 77 ENSG00000234108.1 RP11-115A15.2 chr1 80495903 80496233 + processed_pseudogene KNOWN OTTHUMG00000000523.1 331 331 1 ENSG00000218896.1 TUBB8P2 chr6 143436216 143436710 + processed_pseudogene KNOWN OTTHUMG00000015726.1 495 495 1 ENSG00000278392.1 AL031320.1 chr6 143449603 143449668 - miRNA NOVEL NA 66 66 1 ENSG00000223203.1 RNA5SP221 chr6 143449809 143449911 + rRNA KNOWN NA 103 103 1 ENSG00000034693.13 PEX3 chr6 143450807 143490010 + protein_coding KNOWN OTTHUMG00000015730.2 39204 2222 21 ENSG00000278206.1 RP1-20N2.8 chr6 143484979 143507327 + processed_transcript NOVEL OTTHUMG00000188641.1 22349 2079 5 ENSG00000229036.6 VDAC1P8 chr6 143490424 143506406 + transcribed_processed_pseudogene KNOWN OTTHUMG00000015727.2 15983 5136 43 ENSG00000001036.12 FUCA2 chr6 143494811 143511690 - protein_coding KNOWN OTTHUMG00000015728.2 16880 2793 12 ENSG00000112419.13 PHACTR2 chr6 143536845 143831185 + protein_coding KNOWN OTTHUMG00000015732.3 294341 11224 88 ENSG00000235740.1 RP11-436I24.1 chr6 143554325 143562031 - antisense NOVEL OTTHUMG00000015731.1 7707 1699 5 ENSG00000257065.1 RP3-468K18.5 chr6 143807092 143844617 + protein_coding NOVEL OTTHUMG00000167907.1 37526 762 5 ENSG00000224326.1 RP5-933B4.1 chr1 80534978 80584363 - lincRNA NOVEL OTTHUMG00000000506.1 49386 349 2 ENSG00000135521.8 LTV1 chr6 143843344 143863812 + protein_coding KNOWN OTTHUMG00000015733.1 20469 1847 11 ENSG00000280148.1 RP3-468K18.7 chr6 143857318 143938471 + protein_coding NOVEL OTTHUMG00000189261.1 81154 1496 10 ENSG00000270890.1 RP3-468K18.6 chr6 143858062 143858689 - processed_pseudogene KNOWN OTTHUMG00000184579.1 628 628 1 ENSG00000118491.9 ZC2HC1B chr6 143864436 143938356 + protein_coding KNOWN OTTHUMG00000015734.2 73921 1085 17 ENSG00000118495.17 PLAGL1 chr6 143940300 144064599 - protein_coding KNOWN OTTHUMG00000015738.3 124300 8719 113 ENSG00000280777.1 HYMAI chr6 144004916 144008262 - non_coding KNOWN OTTHUMG00000189750.1 3347 3347 1 ENSG00000276680.1 HYMAI chr6 144007227 144007464 + misc_RNA NOVEL NA 238 238 1 ENSG00000217231.2 RP3-340H11.2 chr6 144036618 144037704 + processed_pseudogene KNOWN OTTHUMG00000015735.3 1087 649 3 ENSG00000169976.6 SF3B5 chr6 144094881 144095573 - protein_coding KNOWN OTTHUMG00000015737.1 693 693 1 ENSG00000219297.1 MRPL42P3 chr6 144136450 144136775 + processed_pseudogene KNOWN OTTHUMG00000015736.1 326 326 1 ENSG00000234184.4 RP5-887A10.1 chr1 80535755 80646788 + lincRNA NOVEL OTTHUMG00000000507.1 111034 709 10 ENSG00000135604.9 STX11 chr6 144150526 144188370 + protein_coding KNOWN OTTHUMG00000015739.1 37845 1926 2 ENSG00000217027.1 TPT1P4 chr6 144200447 144200965 - processed_pseudogene KNOWN OTTHUMG00000015740.1 519 519 1 ENSG00000216475.1 RP1-91J24.1 chr6 144257034 144257624 - processed_pseudogene KNOWN OTTHUMG00000015741.1 591 591 1 ENSG00000152818.17 UTRN chr6 144285701 144853034 + protein_coding KNOWN OTTHUMG00000015746.5 567334 14604 148 ENSG00000225311.1 RP1-91J24.3 chr6 144311699 144333301 - antisense NOVEL OTTHUMG00000015742.1 21603 501 2 ENSG00000219409.2 RP11-106E7.1 chr6 144397959 144398752 + processed_pseudogene KNOWN OTTHUMG00000015743.3 794 794 1 ENSG00000217195.1 RP11-277I20.2 chr6 144706733 144707047 - processed_pseudogene KNOWN OTTHUMG00000015744.1 315 315 1 ENSG00000220739.2 RP11-277I20.3 chr6 144708106 144708497 - processed_pseudogene KNOWN OTTHUMG00000015745.2 392 392 1 ENSG00000221796.1 AL356739.1 chr6 145348758 145348849 + miRNA NOVEL NA 92 92 1 ENSG00000201119.1 RNU1-33P chr6 145463238 145463399 - snRNA KNOWN NA 162 162 1 ENSG00000223009.2 AL136234.1 chr1 80599705 80599793 - miRNA NOVEL NA 89 89 1 ENSG00000217612.2 RP1-28C20.1 chr6 145489630 145492092 - processed_pseudogene KNOWN OTTHUMG00000016100.2 2463 1879 2 ENSG00000112425.12 EPM2A chr6 145501583 145736024 - protein_coding KNOWN OTTHUMG00000015747.1 234442 5662 35 ENSG00000270638.1 RP3-466P17.1 chr6 145735570 145737218 + lincRNA NOVEL OTTHUMG00000184940.1 1649 1649 1 ENSG00000270828.1 RP3-466P17.2 chr6 145736911 145737173 - lincRNA NOVEL OTTHUMG00000184941.1 263 263 1 ENSG00000280184.1 AL023806.1 chr6 145789760 145791832 - protein_coding KNOWN NA 2073 2073 1 ENSG00000118496.4 FBXO30 chr6 145793502 145814753 - protein_coding KNOWN OTTHUMG00000015749.2 21252 9009 3 ENSG00000235652.6 RP11-545I5.3 chr6 145799409 145886585 + antisense NOVEL OTTHUMG00000015748.4 87177 6116 37 ENSG00000146414.14 SHPRH chr6 145864245 145964423 - protein_coding KNOWN OTTHUMG00000015750.3 100179 17637 214 ENSG00000152822.12 GRM1 chr6 146027646 146437598 + protein_coding KNOWN OTTHUMG00000015752.3 409953 7272 50 ENSG00000187103.3 FUNDC2P3 chr6 146171315 146171847 + processed_pseudogene KNOWN OTTHUMG00000015751.3 533 533 1 ENSG00000227937.1 MTND2P30 chr1 81080790 81081171 + processed_pseudogene KNOWN OTTHUMG00000010773.1 382 382 1 ENSG00000222971.1 RNA5SP222 chr6 146340420 146340524 + rRNA KNOWN NA 105 105 1 ENSG00000216811.2 RP1-69B13.2 chr6 146364931 146365494 - processed_pseudogene KNOWN OTTHUMG00000015754.2 564 564 1 ENSG00000118508.4 RAB32 chr6 146543693 146554965 + protein_coding KNOWN OTTHUMG00000015755.1 11273 1217 3 ENSG00000237468.2 RP11-715G15.1 chr6 146594516 146598931 - lincRNA NOVEL OTTHUMG00000015756.2 4416 2190 3 ENSG00000118492.15 ADGB chr6 146598965 146815462 + protein_coding KNOWN OTTHUMG00000015758.10 216498 7773 147 ENSG00000273719.1 RP11-715G15.2 chr6 146638844 146639261 - processed_pseudogene KNOWN OTTHUMG00000187647.1 418 418 1 ENSG00000228283.3 KATNBL1P6 chr6 146802359 146803824 - transcribed_processed_pseudogene KNOWN OTTHUMG00000015759.3 1466 1466 2 ENSG00000233452.5 STXBP5-AS1 chr6 146841901 147204614 - antisense NOVEL OTTHUMG00000015762.4 362714 6011 56 ENSG00000227748.1 RP11-497D6.3 chr6 146859181 146863081 + lincRNA NOVEL OTTHUMG00000015760.1 3901 455 3 ENSG00000272397.1 RP11-497D6.5 chr6 146948528 146951159 - lincRNA NOVEL OTTHUMG00000185358.1 2632 2144 2 ENSG00000229752.1 RPL7P10 chr1 81098267 81099005 - processed_pseudogene KNOWN OTTHUMG00000009727.1 739 739 1 ENSG00000196634.3 RP3-337D23.3 chr6 147158925 147180992 + lincRNA NOVEL OTTHUMG00000015761.1 22068 453 3 ENSG00000164506.13 STXBP5 chr6 147204425 147390476 + protein_coding KNOWN OTTHUMG00000015766.3 186052 10504 102 ENSG00000273997.1 RP11-361F15.5 chr6 147406531 147406824 + processed_pseudogene KNOWN OTTHUMG00000187648.1 294 294 1 ENSG00000220494.4 YAP1P1 chr6 147406889 147408281 + processed_pseudogene KNOWN OTTHUMG00000015765.2 1393 1393 1 ENSG00000203727.3 SAMD5 chr6 147508927 147737547 + protein_coding KNOWN OTTHUMG00000015767.2 228621 6320 4 ENSG00000227681.4 RP11-307P5.1 chr6 147660703 147953937 + lincRNA NOVEL OTTHUMG00000015769.1 293235 1267 12 ENSG00000226249.1 RP11-307P5.2 chr6 147741434 147743324 - lincRNA NOVEL OTTHUMG00000015768.1 1891 603 2 ENSG00000234675.1 RP11-242F11.2 chr6 148017422 148020974 - lincRNA NOVEL OTTHUMG00000015770.1 3553 446 3 ENSG00000230205.1 RP11-631F7.2 chr6 148133809 148137404 - lincRNA NOVEL OTTHUMG00000015771.1 3596 426 2 ENSG00000224658.1 RP11-631F7.1 chr6 148237585 148283408 - antisense NOVEL OTTHUMG00000015772.1 45824 311 4 ENSG00000235089.1 RP3-445O10.1 chr1 81208568 81209210 + processed_pseudogene KNOWN OTTHUMG00000009728.1 643 643 1 ENSG00000111961.15 SASH1 chr6 148272304 148552050 + protein_coding KNOWN OTTHUMG00000015773.1 279747 9476 36 ENSG00000207345.1 RNU6-1222P chr6 148278672 148278778 + snRNA KNOWN NA 107 107 1 ENSG00000215223.3 CYP51A1P3 chr6 148478693 148480763 + processed_pseudogene KNOWN OTTHUMG00000015774.2 2071 1428 3 ENSG00000223322.2 AL033378.1 chr6 148524153 148524240 - miRNA NOVEL NA 88 88 1 ENSG00000217824.1 SNRPEP6 chr6 148567378 148567654 - processed_pseudogene KNOWN OTTHUMG00000015775.1 277 277 1 ENSG00000231368.1 RP11-461H3.2 chr6 148647707 148648597 - processed_pseudogene KNOWN OTTHUMG00000015776.2 891 891 1 ENSG00000111962.7 UST chr6 148747328 149076990 + protein_coding KNOWN OTTHUMG00000016135.1 329663 4563 13 ENSG00000227660.1 RP11-162J8.2 chr6 148955628 148964684 - antisense NOVEL OTTHUMG00000015777.1 9057 714 3 ENSG00000236591.1 RP11-162J8.3 chr6 149027700 149032573 - antisense NOVEL OTTHUMG00000015778.1 4874 130 2 ENSG00000219487.2 RP11-365H23.1 chr6 149112009 149112672 - processed_pseudogene KNOWN OTTHUMG00000015779.2 664 664 1 ENSG00000223026.1 RN7SKP247 chr1 81251789 81252096 + misc_RNA KNOWN NA 308 308 1 ENSG00000263481.1 AL603766.1 chr6 149176707 149176794 - miRNA NOVEL NA 88 88 1 ENSG00000228408.4 RP1-111D6.3 chr6 149217926 149244072 + lincRNA NOVEL OTTHUMG00000015782.1 26147 1371 8 ENSG00000055208.16 TAB2 chr6 149218641 149411613 + protein_coding KNOWN OTTHUMG00000015783.4 192973 5528 36 ENSG00000225924.1 RP1-111D6.2 chr6 149243299 149244001 - antisense NOVEL OTTHUMG00000015781.1 703 562 2 ENSG00000241391.3 RN7SL234P chr6 149291352 149291646 + misc_RNA KNOWN NA 295 295 1 ENSG00000216265.1 FABP12P1 chr6 149304107 149304428 - processed_pseudogene KNOWN OTTHUMG00000015780.1 322 322 1 ENSG00000177688.6 SUMO4 chr6 149400227 149401292 + protein_coding KNOWN OTTHUMG00000015785.1 1066 1066 1 ENSG00000178199.12 ZC3H12D chr6 149446795 149485061 - protein_coding KNOWN OTTHUMG00000015786.5 38267 6733 17 ENSG00000219553.2 RP1-281H8.3 chr6 149491567 149492289 - processed_pseudogene KNOWN OTTHUMG00000015784.2 723 723 1 ENSG00000131013.3 PPIL4 chr6 149504733 149546038 - protein_coding KNOWN OTTHUMG00000015788.1 41306 2646 16 ENSG00000117114.18 LPHN2 chr1 81306160 81992436 + protein_coding KNOWN OTTHUMG00000009844.3 686277 7754 338 ENSG00000252244.1 RNU7-3P chr6 149516956 149517017 + snRNA KNOWN NA 62 62 1 ENSG00000235168.1 RP1-12G14.5 chr6 149561152 149563949 + lincRNA NOVEL OTTHUMG00000015791.1 2798 378 2 ENSG00000055211.11 GINM1 chr6 149566294 149591748 + protein_coding KNOWN OTTHUMG00000015789.1 25455 2248 12 ENSG00000281021.1 RP1-12G14.9 chr6 149576089 149590864 - antisense NOVEL OTTHUMG00000189715.1 14776 744 5 ENSG00000233330.1 RP1-12G14.7 chr6 149591755 149592663 - antisense NOVEL OTTHUMG00000015793.1 909 340 2 ENSG00000220848.4 RPS18P9 chr6 149594084 149594543 + processed_pseudogene KNOWN OTTHUMG00000015790.1 460 460 1 ENSG00000202343.1 SNORA2 chr6 149594625 149594759 + snoRNA NOVEL NA 135 135 1 ENSG00000186625.12 KATNA1 chr6 149594873 149648972 - protein_coding KNOWN OTTHUMG00000015787.2 54100 2308 57 ENSG00000207292.1 Y_RNA chr6 149631437 149631549 + misc_RNA NOVEL NA 113 113 1 ENSG00000131023.11 LATS1 chr6 149658153 149718256 - protein_coding KNOWN OTTHUMG00000016437.5 60104 8643 42 ENSG00000224494.1 HNRNPA3P14 chr1 81426456 81427605 + processed_pseudogene KNOWN OTTHUMG00000009838.1 1150 1150 1 ENSG00000278899.1 AL358852.1 chr6 149717621 149718888 + protein_coding KNOWN NA 1268 1268 1 ENSG00000120253.12 NUP43 chr6 149724315 149749665 - protein_coding KNOWN OTTHUMG00000015795.5 25351 4432 34 ENSG00000120265.15 PCMT1 chr6 149749443 149811420 + protein_coding KNOWN OTTHUMG00000015794.3 61978 2832 67 ENSG00000219433.2 RP11-350J20.4 chr6 149794763 149795746 + processed_pseudogene KNOWN OTTHUMG00000015797.2 984 676 2 ENSG00000231760.4 RP11-350J20.5 chr6 149796151 149826294 - antisense NOVEL OTTHUMG00000015798.4 30144 2148 6 ENSG00000120256.8 LRP11 chr6 149818798 149864026 - protein_coding KNOWN OTTHUMG00000015801.1 45229 3536 13 ENSG00000273132.1 RP11-350J20.12 chr6 149852462 149853192 + antisense NOVEL OTTHUMG00000186262.1 731 312 2 ENSG00000268592.3 RAET1E-AS1 chr6 149863494 149919507 + antisense NOVEL OTTHUMG00000185354.1 56014 1210 2 ENSG00000217733.2 CCT7P1 chr6 149879962 149881572 + processed_pseudogene KNOWN OTTHUMG00000015799.2 1611 1611 1 ENSG00000164520.10 RAET1E chr6 149883375 149898102 - protein_coding KNOWN OTTHUMG00000015796.2 14728 3004 26 ENSG00000273874.1 MIR6859-2 chr1 187891 187958 - miRNA KNOWN NA 68 68 1 ENSG00000169598.14 DFFB chr1 3857267 3885429 + protein_coding KNOWN OTTHUMG00000003525.6 28163 3870 71 ENSG00000227288.3 RP5-837I24.1 chr1 81501794 81503468 + processed_pseudogene KNOWN OTTHUMG00000009839.2 1675 1675 1 ENSG00000223701.3 RAET1E-AS1 chr6 149884431 149919508 + antisense NOVEL OTTHUMG00000015804.3 35078 605 6 ENSG00000216906.2 RP11-350J20.9 chr6 149904243 149906418 + processed_pseudogene KNOWN OTTHUMG00000015800.2 2176 2176 1 ENSG00000203722.6 RAET1G chr6 149916878 149923121 - protein_coding KNOWN OTTHUMG00000015802.2 6244 1486 13 ENSG00000216621.7 RP11-244K5.6 chr6 149934527 149936782 + transcribed_processed_pseudogene KNOWN OTTHUMG00000015807.3 2256 1284 6 ENSG00000131015.4 ULBP2 chr6 149942000 149949235 + protein_coding KNOWN OTTHUMG00000015803.1 7236 1349 5 ENSG00000215094.3 RP11-244K5.7 chr6 149951833 149952239 + processed_pseudogene KNOWN OTTHUMG00000015808.2 407 407 1 ENSG00000111981.4 ULBP1 chr6 149964007 149973710 + protein_coding KNOWN OTTHUMG00000015810.2 9704 3142 5 ENSG00000219298.1 RP11-472G23.3 chr6 149977471 149979105 + processed_pseudogene KNOWN OTTHUMG00000015814.1 1635 551 2 ENSG00000231120.3 BTF3P10 chr6 149977922 149978416 + processed_pseudogene KNOWN OTTHUMG00000015813.1 495 495 1 ENSG00000218358.2 RAET1K chr6 149998019 150005157 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000015815.2 7139 1896 8 ENSG00000227960.1 RP5-837I24.6 chr1 81505099 81506296 + sense_intronic NOVEL OTTHUMG00000037783.1 1198 343 2 ENSG00000155918.6 RAET1L chr6 150018334 150025532 - protein_coding KNOWN OTTHUMG00000015809.1 7199 1346 9 ENSG00000216444.1 RAET1M chr6 150032769 150033566 + processed_pseudogene KNOWN OTTHUMG00000015816.1 798 596 2 ENSG00000235972.1 RP11-472G23.10 chr6 150040547 150042033 - lincRNA NOVEL OTTHUMG00000015812.1 1487 880 2 ENSG00000213091.2 PHBP1 chr6 150042546 150043353 + processed_pseudogene KNOWN OTTHUMG00000015817.2 808 808 1 ENSG00000131019.9 ULBP3 chr6 150063150 150069095 - protein_coding KNOWN OTTHUMG00000015811.2 5946 988 9 ENSG00000198729.4 PPP1R14C chr6 150143076 150250357 + protein_coding KNOWN OTTHUMG00000015818.1 107282 2152 4 ENSG00000238594.1 snoU13 chr6 150164584 150164686 + snoRNA NOVEL NA 103 103 1 ENSG00000201628.1 RNU4-7P chr6 150326623 150326763 - snRNA KNOWN NA 141 141 1 ENSG00000009765.13 IYD chr6 150368892 150405969 + protein_coding KNOWN OTTHUMG00000016347.4 37078 10362 46 ENSG00000220598.1 SSR1P1 chr6 150384307 150385120 - processed_pseudogene KNOWN OTTHUMG00000015819.1 814 814 1 ENSG00000234953.2 RP5-837I24.2 chr1 81513880 81557702 - antisense NOVEL OTTHUMG00000009840.1 43823 643 4 ENSG00000219622.1 RP11-291C6.1 chr6 150504811 150510300 - processed_pseudogene KNOWN OTTHUMG00000015820.1 5490 862 3 ENSG00000120278.13 PLEKHG1 chr6 150599863 150843665 + protein_coding KNOWN OTTHUMG00000015824.4 243803 7398 52 ENSG00000232891.1 RP11-136K14.1 chr6 150600834 150605850 + sense_intronic NOVEL OTTHUMG00000015821.1 5017 378 2 ENSG00000224029.1 RP11-136K14.2 chr6 150624677 150626086 + sense_intronic NOVEL OTTHUMG00000015822.1 1410 639 2 ENSG00000226599.1 RP11-136K14.3 chr6 150650772 150652025 - lincRNA NOVEL OTTHUMG00000015823.1 1254 614 2 ENSG00000213089.4 PDCL3P5 chr6 150827663 150828384 + processed_pseudogene KNOWN OTTHUMG00000015825.2 722 722 1 ENSG00000120254.14 MTHFD1L chr6 150865549 151101887 + protein_coding KNOWN OTTHUMG00000015828.3 236339 5021 134 ENSG00000218996.1 RP1-99E18.2 chr6 150934968 150935566 + processed_pseudogene KNOWN OTTHUMG00000015826.1 599 599 1 ENSG00000202119.1 RNU6-302P chr6 150939222 150939328 + snRNA KNOWN NA 107 107 1 ENSG00000221469.1 AL133260.1 chr6 151039916 151039971 - miRNA NOVEL NA 56 56 1 ENSG00000242598.1 MED28P8 chr1 81557121 81557832 - processed_pseudogene KNOWN OTTHUMG00000009841.1 712 521 2 ENSG00000232290.1 RP1-292B18.3 chr6 151054897 151056057 - antisense NOVEL OTTHUMG00000015829.1 1161 396 2 ENSG00000223598.1 RP1-292B18.4 chr6 151088103 151228447 - antisense NOVEL OTTHUMG00000015831.1 140345 853 5 ENSG00000219747.1 RP1-292B18.1 chr6 151099529 151099933 + processed_pseudogene KNOWN OTTHUMG00000015827.1 405 405 1 ENSG00000231883.1 RP1-297M16.2 chr6 151196681 151197638 - lincRNA NOVEL OTTHUMG00000015830.1 958 804 2 ENSG00000238616.1 RNU6-300P chr6 151201341 151201444 + snRNA KNOWN NA 104 104 1 ENSG00000213087.3 RP11-613F7.1 chr6 151225550 151225947 - processed_pseudogene KNOWN OTTHUMG00000015832.1 398 398 1 ENSG00000131016.15 AKAP12 chr6 151239999 151358557 + protein_coding KNOWN OTTHUMG00000015833.1 118559 8741 17 ENSG00000252431.1 RNU6-1247P chr6 151280515 151280612 - snRNA KNOWN NA 98 98 1 ENSG00000252487.1 RNY4P20 chr6 151298841 151298933 - misc_RNA KNOWN NA 93 93 1 ENSG00000223039.1 RN7SKP268 chr6 151319635 151319950 + misc_RNA KNOWN NA 316 316 1 ENSG00000236676.1 RP5-837I24.4 chr1 81585941 81625713 - antisense NOVEL OTTHUMG00000009842.1 39773 641 3 ENSG00000181472.4 ZBTB2 chr6 151364117 151391548 - protein_coding KNOWN OTTHUMG00000015834.1 27432 3090 3 ENSG00000252615.1 Y_RNA chr6 151378000 151378099 - misc_RNA NOVEL NA 100 100 1 ENSG00000155906.15 RMND1 chr6 151404763 151452181 - protein_coding KNOWN OTTHUMG00000015837.3 47419 2373 45 ENSG00000219395.2 HSPA8P15 chr6 151411259 151413945 - processed_pseudogene KNOWN OTTHUMG00000015835.2 2687 786 2 ENSG00000146476.9 C6orf211 chr6 151452258 151470101 + protein_coding KNOWN OTTHUMG00000015838.4 17844 2819 17 ENSG00000120262.9 CCDC170 chr6 151494030 151621193 + protein_coding KNOWN OTTHUMG00000015839.2 127164 5419 17 ENSG00000207422.1 RNU6-813P chr6 151615773 151615879 - snRNA KNOWN NA 107 107 1 ENSG00000091831.20 ESR1 chr6 151656691 152129619 + protein_coding KNOWN OTTHUMG00000016103.5 472929 13629 68 ENSG00000233823.1 RP3-443C4.2 chr6 151813276 151814179 - antisense NOVEL OTTHUMG00000016436.1 904 258 2 ENSG00000131018.21 SYNE1 chr6 152121684 152637801 - protein_coding KNOWN OTTHUMG00000015841.11 516118 46064 1050 ENSG00000234683.1 RP5-837I24.5 chr1 81596157 81596506 - processed_pseudogene KNOWN OTTHUMG00000009843.1 350 350 1 ENSG00000234577.1 SYNE1-AS1 chr6 152380546 152381564 + antisense NOVEL OTTHUMG00000015843.1 1019 553 2 ENSG00000226193.1 RP3-398G3.5 chr6 152402398 152404966 + antisense NOVEL OTTHUMG00000015845.1 2569 385 2 ENSG00000202044.1 RNA5SP223 chr6 152410275 152410394 + rRNA KNOWN NA 120 120 1 ENSG00000233464.2 NANOGP11 chr6 152545930 152546984 + antisense KNOWN OTTHUMG00000015847.2 1055 727 2 ENSG00000120279.6 MYCT1 chr6 152697895 152724567 + protein_coding KNOWN OTTHUMG00000015850.3 26673 3030 7 ENSG00000218792.2 HSPD1P16 chr6 152705735 152706128 + processed_pseudogene KNOWN OTTHUMG00000015849.2 394 394 1 ENSG00000146469.11 VIP chr6 152750798 152759765 + protein_coding KNOWN OTTHUMG00000015851.1 8968 1584 19 ENSG00000224893.4 RP1-200K18.1 chr6 152794496 152831913 - lincRNA NOVEL OTTHUMG00000015852.1 37418 563 5 ENSG00000266595.1 AL133269.1 chr6 152856666 152856744 - miRNA NOVEL NA 79 79 1 ENSG00000217372.2 TUBB4BP7 chr6 152898047 152899280 + processed_pseudogene KNOWN OTTHUMG00000015853.2 1234 1234 1 ENSG00000215875.4 ST13P20 chr1 81721693 81723068 + transcribed_processed_pseudogene KNOWN OTTHUMG00000009846.2 1376 1065 2 ENSG00000220745.2 RP1-101K10.4 chr6 152959359 152959605 - processed_pseudogene KNOWN OTTHUMG00000015855.2 247 247 1 ENSG00000112029.8 FBXO5 chr6 152970519 152983579 - protein_coding KNOWN OTTHUMG00000015854.2 13061 3833 12 ENSG00000227627.1 RP1-101K10.6 chr6 152983750 152989223 + antisense NOVEL OTTHUMG00000015856.1 5474 663 3 ENSG00000112031.14 MTRF1L chr6 152987362 153002685 - protein_coding KNOWN OTTHUMG00000015857.2 15324 4273 57 ENSG00000091844.6 RGS17 chr6 153004459 153131249 - protein_coding KNOWN OTTHUMG00000015858.2 126791 7899 9 ENSG00000212101.1 AL080276.1 chr6 153052462 153052544 + miRNA NOVEL NA 83 83 1 ENSG00000201939.1 RNA5SP224 chr6 153159220 153159345 - rRNA KNOWN NA 126 126 1 ENSG00000281411.1 AL121967.1 chr6 153223991 153224124 - miRNA NOVEL NA 134 134 1 ENSG00000213121.2 RP11-306O13.1 chr6 153231320 153347488 + lincRNA NOVEL OTTHUMG00000187100.1 116169 1212 3 ENSG00000218426.5 RP11-475C16.1 chr6 153282287 153282733 - processed_pseudogene KNOWN OTTHUMG00000015859.2 447 447 1 ENSG00000274207.1 AC113949.1 chr1 81990753 81990806 + miRNA NOVEL NA 54 54 1 ENSG00000237312.1 RP11-475C16.2 chr6 153304595 153308982 - lincRNA NOVEL OTTHUMG00000015860.1 4388 438 3 ENSG00000264321.1 AL358134.1 chr6 153344113 153344215 + miRNA NOVEL NA 103 103 1 ENSG00000281329.1 AL358134.2 chr6 153419021 153419090 - miRNA NOVEL NA 70 70 1 ENSG00000222806.1 RNA5SP225 chr6 153420438 153420572 + rRNA KNOWN NA 135 135 1 ENSG00000217160.2 RP11-331O9.1 chr6 153665707 153666390 + processed_pseudogene KNOWN OTTHUMG00000015861.2 684 684 1 ENSG00000242246.2 RP11-331O9.2 chr6 153666466 153666666 + processed_pseudogene KNOWN OTTHUMG00000015862.2 201 201 1 ENSG00000218776.4 RP11-331O9.3 chr6 153666627 153667318 + processed_pseudogene KNOWN OTTHUMG00000015863.2 692 692 1 ENSG00000217044.1 RP11-331O9.4 chr6 153667318 153668106 + processed_pseudogene KNOWN OTTHUMG00000015864.1 789 789 1 ENSG00000220733.1 RP11-331O9.5 chr6 153668177 153668362 + processed_pseudogene KNOWN OTTHUMG00000015865.1 186 186 1 ENSG00000220514.1 RP11-331O9.6 chr6 153668589 153668858 + processed_pseudogene KNOWN OTTHUMG00000015866.1 270 270 1 ENSG00000233290.1 RP11-147G16.1 chr1 82215220 82261133 - lincRNA NOVEL OTTHUMG00000009845.1 45914 671 2 ENSG00000216713.1 MTND4P13 chr6 153668879 153669901 + processed_pseudogene KNOWN OTTHUMG00000015867.1 1023 1023 1 ENSG00000199246.1 RNU6-896P chr6 153681447 153681553 + snRNA KNOWN NA 107 107 1 ENSG00000217085.2 HMGB3P19 chr6 153938433 153938992 - processed_pseudogene KNOWN OTTHUMG00000015868.2 560 560 1 ENSG00000112038.16 OPRM1 chr6 154010496 154246867 + protein_coding KNOWN OTTHUMG00000015870.6 236372 8135 89 ENSG00000074706.12 IPCEF1 chr6 154154496 154356792 - protein_coding KNOWN OTTHUMG00000015872.4 202297 8474 85 ENSG00000153721.16 CNKSR3 chr6 154159828 154510659 - protein_coding KNOWN OTTHUMG00000015873.5 350832 22895 70 ENSG00000237593.1 RP11-317B3.2 chr6 154216931 154217489 + processed_pseudogene KNOWN OTTHUMG00000015871.1 559 559 1 ENSG00000277810.1 AL357075.1 chr6 154503980 154504072 + miRNA NOVEL NA 93 93 1 ENSG00000275419.1 RP11-486M3.3 chr6 154542552 154542740 + processed_pseudogene KNOWN OTTHUMG00000187649.1 189 189 1 ENSG00000220181.1 RP11-486M3.2 chr6 154549517 154550242 + processed_pseudogene KNOWN OTTHUMG00000015874.1 726 726 1 ENSG00000277664.1 AL357973.1 chr1 82660030 82660119 + miRNA NOVEL NA 90 90 1 ENSG00000219146.1 RPS4XP8 chr6 154576309 154577079 + processed_pseudogene KNOWN OTTHUMG00000015875.1 771 771 1 ENSG00000231316.1 RP11-134L4.2 chr6 154605616 154605954 - processed_pseudogene KNOWN OTTHUMG00000157130.1 339 339 1 ENSG00000205625.2 RP11-15G8.1 chr6 154706643 154707795 + processed_pseudogene KNOWN OTTHUMG00000015876.1 1153 1153 1 ENSG00000213079.8 SCAF8 chr6 154733325 154834244 + protein_coding KNOWN OTTHUMG00000015877.2 100920 5481 77 ENSG00000200594.1 RNU6-824P chr6 154825176 154825279 - snRNA KNOWN NA 104 104 1 ENSG00000146426.16 TIAM2 chr6 154832697 155257723 + protein_coding KNOWN OTTHUMG00000015880.10 425027 11532 232 ENSG00000218757.1 RP3-472M2.2 chr6 154845074 154845620 - processed_pseudogene KNOWN OTTHUMG00000015878.1 547 547 1 ENSG00000264814.1 MIR1273C chr6 154853360 154853436 + miRNA KNOWN NA 77 77 1 ENSG00000223286.1 AL121952.1 chr6 154881282 154881370 + miRNA NOVEL NA 89 89 1 ENSG00000238963.2 U8 chr6 154905076 154905206 - snoRNA NOVEL NA 131 131 1 ENSG00000198912.9 C1orf174 chr1 3889125 3900293 - protein_coding KNOWN OTTHUMG00000003739.1 11169 4388 12 ENSG00000230817.4 LINC01362 chr1 82903183 83166815 + lincRNA NOVEL OTTHUMG00000009769.1 263633 1878 15 ENSG00000274451.1 RP1-66H9.1 chr6 155004835 155005318 - unprocessed_pseudogene KNOWN OTTHUMG00000187651.1 484 319 3 ENSG00000235381.1 RP11-477D19.2 chr6 155253139 155256724 - antisense NOVEL OTTHUMG00000015879.1 3586 3088 2 ENSG00000029639.9 TFB1M chr6 155257509 155314493 - protein_coding KNOWN OTTHUMG00000015881.1 56985 2736 34 ENSG00000171217.5 CLDN20 chr6 155264013 155276548 + protein_coding KNOWN OTTHUMG00000015882.1 12536 1209 2 ENSG00000232529.1 RP1-257I9.2 chr6 155380511 155381183 - lincRNA NOVEL OTTHUMG00000015884.1 673 554 2 ENSG00000074771.3 NOX3 chr6 155395370 155455903 - protein_coding KNOWN OTTHUMG00000015883.1 60534 2042 14 ENSG00000238789.1 RNU7-152P chr6 155654963 155655026 - snRNA KNOWN NA 64 64 1 ENSG00000221456.1 MIR1202 chr6 155946797 155946879 + miRNA KNOWN NA 83 83 1 ENSG00000212295.1 SNORD28 chr6 156378750 156378824 + snoRNA NOVEL NA 75 75 1 ENSG00000227360.1 RP11-518I13.1 chr6 156493226 156499771 - lincRNA NOVEL OTTHUMG00000015885.1 6546 811 5 ENSG00000236268.4 LINC01361 chr1 82973882 82986208 - lincRNA NOVEL OTTHUMG00000009770.1 12327 1586 6 ENSG00000220347.1 RP11-230C9.1 chr6 156662050 156662437 + processed_pseudogene KNOWN OTTHUMG00000015886.1 388 388 1 ENSG00000271265.1 RP11-230C9.4 chr6 156774217 156774662 - lincRNA NOVEL OTTHUMG00000185138.1 446 446 1 ENSG00000271551.1 RP11-230C9.2 chr6 156776360 156777077 - lincRNA NOVEL OTTHUMG00000185117.1 718 718 1 ENSG00000049618.20 ARID1B chr6 156777929 157210779 + protein_coding KNOWN OTTHUMG00000015890.4 432851 16334 90 ENSG00000271899.1 MIR4466 chr6 156779678 156779731 - miRNA KNOWN NA 54 54 1 ENSG00000270487.1 RP11-230C9.3 chr6 156780327 156780455 - antisense NOVEL OTTHUMG00000185139.1 129 129 1 ENSG00000218596.2 RP11-2J18.1 chr6 156976294 156977072 + processed_pseudogene KNOWN OTTHUMG00000015888.2 779 378 2 ENSG00000233044.1 RP1-137K2.2 chr6 157107727 157119706 - antisense NOVEL OTTHUMG00000015889.1 11980 423 2 ENSG00000215712.9 TMEM242 chr6 157289386 157323601 - protein_coding KNOWN OTTHUMG00000015893.3 34216 4644 7 ENSG00000217783.2 LDHAL6FP chr6 157299045 157300126 - processed_pseudogene KNOWN OTTHUMG00000015891.2 1082 1082 1 ENSG00000231364.1 RP11-413G15.1 chr1 83446053 83454771 + lincRNA NOVEL OTTHUMG00000009772.1 8719 736 2 ENSG00000271040.1 RP5-933K21.3 chr6 157323964 157324477 + lincRNA NOVEL OTTHUMG00000185283.1 514 514 1 ENSG00000213078.3 RP5-933K21.2 chr6 157365990 157366923 - processed_pseudogene KNOWN OTTHUMG00000015892.1 934 934 1 ENSG00000218631.1 RP3-395C13.1 chr6 157372556 157373171 - processed_pseudogene KNOWN OTTHUMG00000015894.1 616 616 1 ENSG00000175048.15 ZDHHC14 chr6 157381133 157678146 + protein_coding KNOWN OTTHUMG00000015896.5 297014 11121 57 ENSG00000266617.1 MIR3692 chr6 157529132 157529200 + miRNA KNOWN NA 69 69 1 ENSG00000219448.1 RP11-193H22.2 chr6 157577087 157582277 - processed_pseudogene KNOWN OTTHUMG00000015895.1 5191 5191 1 ENSG00000130340.13 SNX9 chr6 157700387 157945077 + protein_coding KNOWN OTTHUMG00000015903.2 244691 4646 48 ENSG00000234361.1 RP11-52J3.3 chr6 157829143 157830573 - antisense NOVEL OTTHUMG00000015898.1 1431 681 2 ENSG00000229502.4 RP11-52J3.2 chr6 157872571 157875210 - antisense NOVEL OTTHUMG00000015897.1 2640 1019 6 ENSG00000236324.1 RP3-403L10.3 chr6 157885114 157892786 - antisense NOVEL OTTHUMG00000015900.1 7673 372 2 ENSG00000233008.4 RP11-475O6.1 chr1 83575776 83861023 - lincRNA NOVEL OTTHUMG00000009930.1 285248 5425 14 ENSG00000220867.1 HSPE1P26 chr6 157924402 157924676 + processed_pseudogene KNOWN OTTHUMG00000015899.1 275 275 1 ENSG00000252658.1 RNU6-786P chr6 157934168 157934257 + snRNA KNOWN NA 90 90 1 ENSG00000078269.12 SYNJ2 chr6 157981887 158099176 + protein_coding KNOWN OTTHUMG00000015904.3 117290 9921 63 ENSG00000233496.1 SYNJ2-IT1 chr6 158001107 158002383 + sense_intronic NOVEL OTTHUMG00000015901.1 1277 599 3 ENSG00000122335.12 SERAC1 chr6 158109515 158168270 - protein_coding KNOWN OTTHUMG00000015905.2 58756 8873 88 ENSG00000272047.1 GTF2H5 chr6 158168352 158199344 + protein_coding KNOWN OTTHUMG00000015906.2 30993 7481 3 ENSG00000130338.11 TULP4 chr6 158232236 158511828 + protein_coding KNOWN OTTHUMG00000015910.2 279593 12285 47 ENSG00000188451.8 SRP72P2 chr6 158237336 158242797 - processed_pseudogene KNOWN OTTHUMG00000015907.1 5462 1979 2 ENSG00000274023.1 RP11-732M18.4 chr6 158282841 158428379 + sense_overlapping NOVEL OTTHUMG00000187510.1 145539 561 2 ENSG00000238019.1 RP11-732M18.2 chr6 158397885 158398561 - antisense NOVEL OTTHUMG00000015908.1 677 143 2 ENSG00000237076.1 RP5-836J3.1 chr1 83790280 83801465 + lincRNA NOVEL OTTHUMG00000009931.1 11186 683 3 ENSG00000243373.3 RN7SL173P chr6 158437797 158438088 + misc_RNA KNOWN NA 292 292 1 ENSG00000219188.1 CACYBPP3 chr6 158515605 158516229 - processed_pseudogene KNOWN OTTHUMG00000015911.1 625 625 1 ENSG00000146433.8 TMEM181 chr6 158536436 158635428 + protein_coding KNOWN OTTHUMG00000015913.1 98993 5390 17 ENSG00000218226.1 TATDN2P2 chr6 158609706 158621636 - processed_pseudogene KNOWN OTTHUMG00000015912.1 11931 2226 2 ENSG00000278571.1 MIR7161 chr6 158609707 158609790 + miRNA KNOWN NA 84 84 1 ENSG00000146425.9 DYNLT1 chr6 158636474 158644739 - protein_coding KNOWN OTTHUMG00000015918.1 8266 2949 10 ENSG00000164674.14 SYTL3 chr6 158650014 158764876 + protein_coding KNOWN OTTHUMG00000015916.1 114863 2896 74 ENSG00000219249.2 AMZ2P2 chr6 158725747 158726803 - processed_pseudogene KNOWN OTTHUMG00000015914.2 1057 1057 1 ENSG00000265558.1 MIR3918 chr6 158764661 158764753 - miRNA KNOWN NA 93 93 1 ENSG00000092820.16 EZR chr6 158765741 158819412 - protein_coding KNOWN OTTHUMG00000015917.1 53672 3342 48 ENSG00000137941.15 TTLL7 chr1 83865028 83999150 - protein_coding KNOWN OTTHUMG00000009932.6 134123 10543 177 ENSG00000233893.1 EZR-AS1 chr6 158818011 158820593 + antisense NOVEL OTTHUMG00000015915.1 2583 217 2 ENSG00000277772.1 AL589931.1 chr6 158839528 158839618 - miRNA NOVEL NA 91 91 1 ENSG00000243775.2 OSTCP1 chr6 158841117 158857632 - transcribed_processed_pseudogene KNOWN OTTHUMG00000015919.2 16516 1226 4 ENSG00000203711.10 C6orf99 chr6 158869939 158910353 + lincRNA KNOWN OTTHUMG00000015921.4 40415 859 11 ENSG00000213076.3 yR211F11.2 chr6 158921271 158922150 - processed_pseudogene KNOWN OTTHUMG00000015920.1 880 580 2 ENSG00000223191.1 RNU6-293P chr6 158926466 158926571 - snRNA KNOWN NA 106 106 1 ENSG00000130363.10 RSPH3 chr6 158972871 159000187 - protein_coding KNOWN OTTHUMG00000015924.2 27317 6561 24 ENSG00000271913.4 RP1-111C20.4 chr6 158988178 159064925 + antisense NOVEL OTTHUMG00000185830.1 76748 1951 17 ENSG00000164691.15 TAGAP chr6 159034468 159045152 - protein_coding KNOWN OTTHUMG00000015923.2 10685 4089 27 ENSG00000226032.1 RP1-111C20.3 chr6 159064728 159065273 - lincRNA NOVEL OTTHUMG00000015922.1 546 331 2 ENSG00000233061.1 TTLL7-IT1 chr1 83979118 83984300 - sense_intronic NOVEL OTTHUMG00000009973.1 5183 2921 2 ENSG00000224478.1 RP11-13P5.1 chr6 159107791 159116053 + lincRNA NOVEL OTTHUMG00000015925.1 8263 845 4 ENSG00000233682.3 RP11-13P5.2 chr6 159165899 159170007 - antisense NOVEL OTTHUMG00000015926.3 4109 822 5 ENSG00000164694.15 FNDC1 chr6 159169397 159272109 + protein_coding KNOWN OTTHUMG00000015927.4 102713 6854 49 ENSG00000235086.1 FNDC1-IT1 chr6 159240786 159243329 + sense_intronic NOVEL OTTHUMG00000015929.1 2544 516 2 ENSG00000231178.1 RP11-125D12.1 chr6 159353922 159354673 - lincRNA NOVEL OTTHUMG00000015930.1 752 420 2 ENSG00000234777.1 RP11-125D12.2 chr6 159383531 159396443 + lincRNA NOVEL OTTHUMG00000015931.1 12913 772 3 ENSG00000216480.2 RP3-393E18.1 chr6 159526062 159526527 - processed_pseudogene KNOWN OTTHUMG00000015932.2 466 466 1 ENSG00000276413.1 RP3-393E18.3 chr6 159555964 159556174 + processed_pseudogene KNOWN OTTHUMG00000187653.1 211 211 1 ENSG00000237927.1 RP3-393E18.2 chr6 159586955 159589169 - lincRNA NOVEL OTTHUMG00000141283.1 2215 2002 2 ENSG00000112096.15 SOD2 chr6 159669057 159762529 - protein_coding KNOWN OTTHUMG00000015940.3 93473 18985 66 ENSG00000229486.2 RP4-552O12.1 chr1 84015865 84018371 - processed_pseudogene KNOWN OTTHUMG00000009972.2 2507 1401 5 ENSG00000220305.1 HNRNPH1P1 chr6 159712801 159713985 - processed_pseudogene KNOWN OTTHUMG00000015938.1 1185 1185 1 ENSG00000251988.1 RNU4ATAC18P chr6 159720415 159720540 - snRNA KNOWN NA 126 126 1 ENSG00000146457.13 WTAP chr6 159725585 159756319 + protein_coding KNOWN OTTHUMG00000015933.2 30735 5830 40 ENSG00000120437.8 ACAT2 chr6 159760328 159779055 + protein_coding KNOWN OTTHUMG00000015935.1 18728 4299 18 ENSG00000120438.10 TCP1 chr6 159778498 159789749 - protein_coding KNOWN OTTHUMG00000015937.4 11252 4929 95 ENSG00000207392.1 SNORA20 chr6 159780250 159780381 - snoRNA KNOWN NA 132 132 1 ENSG00000206910.1 SNORA29 chr6 159785594 159785733 - snoRNA KNOWN NA 140 140 1 ENSG00000112110.8 MRPL18 chr6 159789812 159798436 + protein_coding KNOWN OTTHUMG00000015942.1 8625 1375 16 ENSG00000146453.11 PNLDC1 chr6 159800249 159820704 + protein_coding KNOWN OTTHUMG00000015941.3 20456 2206 84 ENSG00000236823.1 RP1-249F5.3 chr6 159899186 159902510 + lincRNA NOVEL OTTHUMG00000015943.2 3325 595 2 ENSG00000271576.1 RP11-486G15.2 chr1 84076331 84077931 - lincRNA NOVEL OTTHUMG00000185155.1 1601 1601 1 ENSG00000130368.5 MAS1 chr6 159906690 159916530 + protein_coding KNOWN OTTHUMG00000015944.2 9841 9841 1 ENSG00000197081.11 IGF2R chr6 159969099 160113507 + protein_coding KNOWN OTTHUMG00000015945.3 144409 14911 61 ENSG00000268257.2 AIRN chr6 160003291 160007664 - antisense KNOWN OTTHUMG00000183173.2 4374 4374 4 ENSG00000213073.4 RP11-288H12.3 chr6 160093082 160096212 + transcribed_processed_pseudogene KNOWN OTTHUMG00000015946.2 3131 3131 2 ENSG00000175003.11 SLC22A1 chr6 160121789 160158718 + protein_coding KNOWN OTTHUMG00000015947.3 36930 2312 54 ENSG00000216516.1 RP11-317M22.1 chr6 160163539 160163755 - processed_pseudogene KNOWN OTTHUMG00000015948.1 217 217 1 ENSG00000112499.11 SLC22A2 chr6 160171061 160277638 - protein_coding KNOWN OTTHUMG00000015950.1 106578 6171 40 ENSG00000230234.1 RP1-276N6.2 chr6 160272617 160276130 + lincRNA NOVEL OTTHUMG00000015949.1 3514 467 2 ENSG00000146477.5 SLC22A3 chr6 160348268 160452581 + protein_coding KNOWN OTTHUMG00000015953.1 104314 3348 11 ENSG00000213071.9 LPAL2 chr6 160453428 160511124 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000015952.3 57697 3286 39 ENSG00000142875.18 PRKACB chr1 84078062 84238498 + protein_coding KNOWN OTTHUMG00000009975.3 160437 6730 182 ENSG00000198670.10 LPA chr6 160531483 160664259 - protein_coding KNOWN OTTHUMG00000015956.1 132777 6419 60 ENSG00000243831.1 RP1-81D8.4 chr6 160666228 160676523 - unprocessed_pseudogene KNOWN OTTHUMG00000015955.1 10296 260 2 ENSG00000224477.4 RP1-81D8.3 chr6 160698288 160700632 + lincRNA NOVEL OTTHUMG00000015954.1 2345 327 4 ENSG00000122194.17 PLG chr6 160702238 160753315 + protein_coding KNOWN OTTHUMG00000015957.3 51078 6380 59 ENSG00000276960.1 RP1-81D8.5 chr6 160755398 160757518 - unprocessed_pseudogene KNOWN OTTHUMG00000187655.1 2121 157 2 ENSG00000274903.1 RP1-81D8.6 chr6 160773988 160783214 + unprocessed_pseudogene KNOWN OTTHUMG00000187657.1 9227 188 2 ENSG00000224371.4 RP11-235G24.1 chr6 160872888 160918649 - lincRNA NOVEL OTTHUMG00000015959.1 45762 813 12 ENSG00000220913.1 RP11-235G24.2 chr6 160905770 160913638 + unprocessed_pseudogene KNOWN OTTHUMG00000015960.1 7869 489 3 ENSG00000233342.1 RP11-235G24.3 chr6 160926369 160927162 + lincRNA NOVEL OTTHUMG00000015961.1 794 379 2 ENSG00000231863.1 RP3-428L16.1 chr6 160931080 160969771 + antisense NOVEL OTTHUMG00000015962.1 38692 573 4 ENSG00000236423.4 LINC01134 chr1 3900372 3917225 + lincRNA NOVEL OTTHUMG00000041129.2 16854 4064 9 ENSG00000213540.3 RP11-486G15.1 chr1 84085741 84086233 + processed_pseudogene KNOWN OTTHUMG00000009974.1 493 493 1 ENSG00000272841.1 RP3-428L16.2 chr6 160990318 160992342 - antisense NOVEL OTTHUMG00000185865.1 2025 2025 1 ENSG00000085511.18 MAP3K4 chr6 160991727 161117385 + protein_coding KNOWN OTTHUMG00000015968.3 125659 7522 205 ENSG00000026652.12 AGPAT4 chr6 161129979 161274061 - protein_coding KNOWN OTTHUMG00000015966.3 144083 8769 29 ENSG00000279355.1 AGPAT4-IT1 chr6 161160105 161161982 - TEC KNOWN OTTHUMG00000152859.1 1878 1878 1 ENSG00000185345.17 PARK2 chr6 161347420 162727771 - protein_coding KNOWN OTTHUMG00000015970.4 1380352 4899 95 ENSG00000221021.1 AL035697.1 chr6 161615066 161615159 + miRNA NOVEL NA 94 94 1 ENSG00000280685.1 AP000887.1 chr6 162500242 162500335 - miRNA NOVEL NA 94 94 1 ENSG00000227913.1 KRT8P44 chr6 162568379 162569728 + processed_pseudogene KNOWN OTTHUMG00000015969.1 1350 1350 1 ENSG00000112530.10 PACRG chr6 162727132 163315492 + protein_coding KNOWN OTTHUMG00000016116.2 588361 2612 45 ENSG00000217557.1 RP11-157L10.1 chr6 162957258 162957548 - processed_pseudogene KNOWN OTTHUMG00000015972.2 291 291 1 ENSG00000266671.3 AL450063.1 chr1 84152387 84152458 + miRNA NOVEL NA 72 72 1 ENSG00000225437.4 RP1-257A15.1 chr6 163042557 163054161 - antisense NOVEL OTTHUMG00000015973.1 11605 1542 12 ENSG00000225683.4 RP1-301L19.1 chr6 163165414 163192002 - antisense NOVEL OTTHUMG00000187105.2 26589 4466 19 ENSG00000281692.1 PACRG-AS1 chr6 163309985 163324530 - antisense KNOWN OTTHUMG00000189584.1 14546 2192 6 ENSG00000217514.1 RP3-495O10.1 chr6 163363210 163363463 + processed_pseudogene KNOWN OTTHUMG00000015974.1 254 254 1 ENSG00000270419.1 CAHM chr6 163413065 163413960 - lincRNA KNOWN OTTHUMG00000175945.2 896 896 1 ENSG00000112531.15 QKI chr6 163414000 163578596 + protein_coding KNOWN OTTHUMG00000015977.4 164597 17368 98 ENSG00000228692.2 RP5-826L7.1 chr6 163586583 163588165 - lincRNA NOVEL OTTHUMG00000015978.2 1583 602 2 ENSG00000235538.1 RP1-230L10.1 chr6 163703904 163759841 + lincRNA NOVEL OTTHUMG00000015979.1 55938 719 2 ENSG00000266128.2 RN7SL366P chr6 163840561 163840852 + misc_RNA KNOWN NA 292 292 1 ENSG00000260422.1 RP1-155D22.2 chr6 164084023 164085661 - lincRNA NOVEL OTTHUMG00000175946.1 1639 1639 1 ENSG00000226970.2 RP11-82H13.2 chr1 84244334 84244577 + processed_pseudogene KNOWN OTTHUMG00000009976.1 244 244 1 ENSG00000230627.1 RP1-155D22.1 chr6 164108620 164109694 - lincRNA NOVEL OTTHUMG00000015980.1 1075 448 2 ENSG00000226739.1 RP11-347L18.1 chr6 164346489 164348644 - lincRNA NOVEL OTTHUMG00000015981.1 2156 466 2 ENSG00000278612.1 AL513023.1 chr6 164539114 164539220 - miRNA NOVEL NA 107 107 1 ENSG00000227455.2 RP11-300M24.1 chr6 164827750 164831630 + lincRNA NOVEL OTTHUMG00000015982.2 3881 3881 3 ENSG00000217878.2 RP11-534P19.1 chr6 165117195 165117524 - processed_pseudogene KNOWN OTTHUMG00000015983.2 330 330 1 ENSG00000112539.13 C6orf118 chr6 165279664 165309607 - protein_coding KNOWN OTTHUMG00000015984.2 29944 2240 17 ENSG00000112541.12 PDE10A chr6 165327287 165986603 - protein_coding KNOWN OTTHUMG00000015986.3 659317 12348 51 ENSG00000199523.1 RNA5SP226 chr6 165409562 165409676 + rRNA KNOWN NA 115 115 1 ENSG00000206681.1 RNU6-730P chr6 165718235 165718338 - snRNA KNOWN NA 104 104 1 ENSG00000236627.1 RP11-252P19.1 chr6 165754189 165775780 + antisense NOVEL OTTHUMG00000015988.1 21592 1122 2 ENSG00000199959.1 SNORA2 chr1 84277321 84277457 + snoRNA NOVEL NA 137 137 1 ENSG00000223942.1 RP11-252P19.2 chr6 165773201 165775186 - sense_intronic NOVEL OTTHUMG00000015989.1 1986 359 2 ENSG00000223414.2 LINC00473 chr6 165908802 165988048 - lincRNA KNOWN OTTHUMG00000015990.2 79247 4376 14 ENSG00000281832.1 LINC00602 chr6 165987551 165989615 + lincRNA KNOWN OTTHUMG00000189549.1 2065 2065 1 ENSG00000216624.2 GAPDHP72 chr6 166064291 166065300 + processed_pseudogene KNOWN OTTHUMG00000015992.2 1010 1010 1 ENSG00000231297.3 RP11-459F1.2 chr6 166099665 166113273 + lincRNA NOVEL OTTHUMG00000015993.1 13609 1035 3 ENSG00000276643.1 SNORD45 chr6 166099853 166099924 + snoRNA NOVEL NA 72 72 1 ENSG00000164458.8 T chr6 166157656 166168700 - protein_coding KNOWN OTTHUMG00000015991.2 11045 2629 31 ENSG00000201292.1 RNU6-153P chr6 166209403 166209506 + snRNA KNOWN NA 104 104 1 ENSG00000280991.1 RP4-655C5.7 chr6 166229334 166229554 + unprocessed_pseudogene KNOWN OTTHUMG00000190283.1 221 221 1 ENSG00000233365.2 RP4-655C5.4 chr6 166236969 166256947 + lincRNA NOVEL OTTHUMG00000015997.2 19979 1548 5 ENSG00000203943.7 SAMD13 chr1 84298366 84389957 + protein_coding KNOWN OTTHUMG00000009859.4 91592 3455 31 ENSG00000213536.2 GNG5P1 chr6 166240290 166240493 - processed_pseudogene KNOWN OTTHUMG00000015996.1 204 204 1 ENSG00000280850.1 RP4-655C5.9 chr6 166275462 166277077 - lincRNA NOVEL OTTHUMG00000190284.1 1616 581 2 ENSG00000176381.5 PRR18 chr6 166305300 166308448 - protein_coding KNOWN OTTHUMG00000167034.3 3149 3149 3 ENSG00000198818.8 SFT2D1 chr6 166319728 166342591 - protein_coding KNOWN OTTHUMG00000016001.2 22864 3104 35 ENSG00000233231.1 HNRNPA1P49 chr6 166334568 166335471 + processed_pseudogene KNOWN OTTHUMG00000015995.1 904 904 1 ENSG00000060762.17 MPC1 chr6 166364919 166383013 - protein_coding KNOWN OTTHUMG00000015999.2 18095 1546 35 ENSG00000261420.1 RP1-168L15.5 chr6 166383189 166384824 + antisense NOVEL OTTHUMG00000175947.1 1636 1636 1 ENSG00000280057.1 RP1-168L15.6 chr6 166388136 166389920 + TEC KNOWN OTTHUMG00000175948.1 1785 1785 1 ENSG00000071242.10 RPS6KA2 chr6 166409364 166906451 - protein_coding KNOWN OTTHUMG00000016007.8 497088 8243 158 ENSG00000232082.1 RPS6KA2-IT1 chr6 166460663 166465383 - sense_intronic NOVEL OTTHUMG00000046164.1 4721 579 4 ENSG00000249237.4 RP11-376N17.4 chr1 84344678 84349939 + unitary_pseudogene KNOWN OTTHUMG00000057589.2 5262 905 6 ENSG00000222958.1 MIR1913 chr6 166509354 166509433 - miRNA KNOWN NA 80 80 1 ENSG00000235272.1 FAM103A2P chr6 166586124 166586477 - processed_pseudogene KNOWN OTTHUMG00000016003.3 354 354 1 ENSG00000235008.1 RP3-497J21.1 chr6 166701094 166702839 - processed_pseudogene KNOWN OTTHUMG00000016004.1 1746 1746 1 ENSG00000249141.1 RP11-514O12.4 chr6 166858094 166956124 - protein_coding PUTATIVE OTTHUMG00000160910.1 98031 600 8 ENSG00000231654.1 RPS6KA2-AS1 chr6 166903698 166904835 + antisense NOVEL OTTHUMG00000016006.1 1138 627 2 ENSG00000026297.14 RNASET2 chr6 166929504 166957191 - protein_coding KNOWN OTTHUMG00000016009.7 27688 7643 107 ENSG00000227598.1 RP1-167A14.2 chr6 166969626 166999065 - antisense NOVEL OTTHUMG00000016010.1 29440 385 3 ENSG00000265828.1 MIR3939 chr6 166997807 166997912 - miRNA KNOWN NA 106 106 1 ENSG00000213066.10 FGFR1OP chr6 166999182 167052713 + protein_coding KNOWN OTTHUMG00000016011.2 53532 15159 53 ENSG00000272980.3 RP11-517H2.6 chr6 166999405 167139141 + processed_transcript NOVEL OTTHUMG00000185866.1 139737 5310 13 ENSG00000240520.4 UOX chr1 84365428 84397831 - unitary_pseudogene KNOWN OTTHUMG00000009861.2 32404 911 13 ENSG00000112486.13 CCR6 chr6 167111807 167139696 + protein_coding KNOWN OTTHUMG00000016015.1 27890 4226 10 ENSG00000166984.10 TCP10L2 chr6 167146414 167196913 + protein_coding KNOWN OTTHUMG00000016014.6 50500 4332 33 ENSG00000120436.3 GPR31 chr6 167156271 167158329 - protein_coding KNOWN OTTHUMG00000016013.1 2059 2059 1 ENSG00000216966.1 RP11-568A7.1 chr6 167208631 167208897 - processed_pseudogene KNOWN OTTHUMG00000016018.1 267 267 1 ENSG00000280707.1 RP11-568A7.4 chr6 167228300 167237511 + lincRNA NOVEL OTTHUMG00000189751.1 9212 985 11 ENSG00000231720.1 RP11-568A7.3 chr6 167237508 167240480 - lincRNA NOVEL OTTHUMG00000016020.1 2973 579 2 ENSG00000228648.1 RP11-568A7.2 chr6 167241891 167245916 + lincRNA NOVEL OTTHUMG00000016019.1 4026 205 2 ENSG00000112494.8 UNC93A chr6 167271169 167316019 + protein_coding KNOWN OTTHUMG00000016021.2 44851 2699 25 ENSG00000120440.12 TTLL2 chr6 167325086 167359503 + protein_coding KNOWN OTTHUMG00000016023.3 34418 3073 12 ENSG00000217447.1 RP3-366N23.4 chr6 167347472 167348053 + processed_pseudogene KNOWN OTTHUMG00000016311.1 582 582 1 ENSG00000137976.7 DNASE2B chr1 84398532 84415018 + protein_coding KNOWN OTTHUMG00000009860.1 16487 1476 10 ENSG00000203690.10 TCP10 chr6 167357031 167384510 - protein_coding KNOWN OTTHUMG00000016026.5 27480 7697 54 ENSG00000272549.1 RP11-351J23.2 chr6 167666840 167679270 - lincRNA NOVEL OTTHUMG00000185869.1 12431 4569 3 ENSG00000203688.4 RP11-351J23.1 chr6 167679626 167683787 - lincRNA NOVEL OTTHUMG00000016027.1 4162 2557 4 ENSG00000213065.2 RP3-431P23.2 chr6 167767083 167768568 - processed_pseudogene KNOWN OTTHUMG00000016028.1 1486 1486 1 ENSG00000146521.8 LINC01558 chr6 167784537 167796859 - lincRNA KNOWN OTTHUMG00000016030.4 12323 2146 7 ENSG00000269155.2 RP3-431P23.5 chr6 167795530 167798248 + lincRNA NOVEL OTTHUMG00000187112.1 2719 2719 1 ENSG00000198221.8 MLLT4-AS1 chr6 167823876 167826709 - lincRNA KNOWN OTTHUMG00000016029.2 2834 2362 7 ENSG00000130396.19 MLLT4 chr6 167826922 167972023 + protein_coding KNOWN OTTHUMG00000016031.8 145102 13720 323 ENSG00000235994.4 RP3-470B24.5 chr6 167975924 167979776 - lincRNA NOVEL OTTHUMG00000016038.2 3853 1539 4 ENSG00000229921.5 KIF25-AS1 chr6 167992822 167997077 - lincRNA KNOWN OTTHUMG00000016036.2 4256 3088 7 ENSG00000117133.9 RPF1 chr1 84479259 84497790 + protein_coding KNOWN OTTHUMG00000009857.1 18532 1728 12 ENSG00000125337.15 KIF25 chr6 167996241 168045089 + protein_coding KNOWN OTTHUMG00000016035.3 48849 2797 38 ENSG00000153303.15 FRMD1 chr6 168055745 168081557 - protein_coding KNOWN OTTHUMG00000016037.8 25813 5788 92 ENSG00000234768.1 RP11-503C24.1 chr6 168194358 168204501 + lincRNA NOVEL OTTHUMG00000016040.1 10144 449 2 ENSG00000237987.1 RP11-503C24.2 chr6 168225279 168226517 - lincRNA NOVEL OTTHUMG00000016041.1 1239 455 2 ENSG00000228361.2 RP11-503C24.3 chr6 168229732 168240715 + lincRNA NOVEL OTTHUMG00000016042.2 10984 470 3 ENSG00000234647.1 RP11-503C24.4 chr6 168242938 168262581 + lincRNA NOVEL OTTHUMG00000016043.1 19644 2246 5 ENSG00000230711.2 CTAGE13P chr6 168286905 168289350 - processed_pseudogene KNOWN OTTHUMG00000016044.1 2446 2446 1 ENSG00000164488.10 DACT2 chr6 168292830 168319754 - protein_coding KNOWN OTTHUMG00000016046.2 26925 4223 15 ENSG00000224417.2 RP11-503C24.6 chr6 168298069 168302114 - sense_intronic NOVEL OTTHUMG00000016045.2 4046 2559 2 ENSG00000260771.1 RP1-39J2.1 chr6 168374697 168375355 + lincRNA NOVEL OTTHUMG00000175949.1 659 659 1 ENSG00000174021.9 GNG5 chr1 84498325 84506565 - protein_coding KNOWN OTTHUMG00000009858.3 8241 1112 10 ENSG00000112562.17 SMOC2 chr6 168441151 168673445 + protein_coding KNOWN OTTHUMG00000016050.5 232295 4032 42 ENSG00000235815.1 RP1-125N5.2 chr6 168716606 168723495 + lincRNA NOVEL OTTHUMG00000016049.2 6890 557 3 ENSG00000280665.1 RP11-35J6.1 chr6 168820423 168820656 + TEC KNOWN OTTHUMG00000190292.1 234 234 1 ENSG00000225879.1 RP3-495K2.3 chr6 168962610 168964341 - lincRNA NOVEL OTTHUMG00000016053.1 1732 914 2 ENSG00000279810.1 RP3-495K2.4 chr6 169033381 169034050 + TEC KNOWN OTTHUMG00000175950.1 670 670 1 ENSG00000229720.1 RP3-495K2.2 chr6 169034197 169035642 - lincRNA NOVEL OTTHUMG00000016052.1 1446 934 2 ENSG00000234519.1 RP3-495K2.1 chr6 169067818 169069424 + lincRNA NOVEL OTTHUMG00000016051.1 1607 401 4 ENSG00000223485.1 RP11-417E7.1 chr6 169158092 169162924 - lincRNA NOVEL OTTHUMG00000016054.2 4833 1054 6 ENSG00000261039.2 RP11-417E7.2 chr6 169175304 169182740 - lincRNA NOVEL OTTHUMG00000175951.3 7437 544 3 ENSG00000226445.1 XXyac-YX65C7_A.2 chr6 169213254 169239565 + antisense NOVEL OTTHUMG00000045405.1 26312 980 3 ENSG00000233304.4 LINC01346 chr1 3940613 3955262 + lincRNA NOVEL OTTHUMG00000000499.2 14650 3571 6 ENSG00000122432.15 SPATA1 chr1 84506291 84566194 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000009924.5 59904 3687 59 ENSG00000186340.13 THBS2 chr6 169215780 169254044 - protein_coding KNOWN OTTHUMG00000045408.1 38265 6397 57 ENSG00000233085.4 XXyac-YX65C7_A.3 chr6 169286534 169289216 - lincRNA NOVEL OTTHUMG00000045406.1 2683 746 5 ENSG00000224999.1 VTA1P1 chr6 169296471 169297959 - processed_pseudogene KNOWN OTTHUMG00000045407.1 1489 866 2 ENSG00000226194.4 RP1-137D17.1 chr6 169369998 169388385 - lincRNA NOVEL OTTHUMG00000016055.1 18388 2685 4 ENSG00000272848.1 RP1-137D17.2 chr6 169426420 169427069 - lincRNA NOVEL OTTHUMG00000185870.1 650 650 1 ENSG00000184465.14 WDR27 chr6 169457212 169702048 - protein_coding KNOWN OTTHUMG00000016061.3 244837 10244 111 ENSG00000265654.1 AL513547.1 chr6 169697248 169697333 + miRNA NOVEL NA 86 86 1 ENSG00000185127.6 C6orf120 chr6 169702190 169704856 + protein_coding KNOWN OTTHUMG00000016057.1 2667 2667 1 ENSG00000130024.13 PHF10 chr6 169703905 169725566 - protein_coding KNOWN OTTHUMG00000016058.3 21662 5534 55 ENSG00000232640.1 RP1-266L20.2 chr6 169725091 169725854 - antisense NOVEL OTTHUMG00000016062.1 764 403 3 ENSG00000117151.11 CTBS chr1 84549606 84574480 - protein_coding KNOWN OTTHUMG00000009922.5 24875 6939 26 ENSG00000227704.1 RP1-266L20.4 chr6 169725504 169738992 + antisense NOVEL OTTHUMG00000016063.1 13489 335 2 ENSG00000184786.5 TCTE3 chr6 169740114 169751587 - protein_coding KNOWN OTTHUMG00000016068.2 11474 2626 5 ENSG00000130023.14 ERMARD chr6 169751622 169781584 + protein_coding KNOWN OTTHUMG00000016067.3 29963 4251 146 ENSG00000266896.1 RP1-266L20.9 chr6 169770413 169772042 + sense_intronic NOVEL OTTHUMG00000180499.1 1630 1630 1 ENSG00000229214.1 LINC00242 chr6 169788790 169798825 - lincRNA KNOWN OTTHUMG00000016064.2 10036 2418 2 ENSG00000231690.2 LINC00574 chr6 169790321 169802873 + lincRNA KNOWN OTTHUMG00000016071.2 12553 2318 3 ENSG00000236173.1 RP1-182D15.2 chr6 169809318 169810102 - lincRNA NOVEL OTTHUMG00000016072.1 785 694 2 ENSG00000232197.1 RP11-302L19.1 chr6 170162517 170163027 + antisense NOVEL OTTHUMG00000016073.1 511 429 2 ENSG00000273100.1 RP11-302L19.3 chr6 170178681 170179660 + lincRNA NOVEL OTTHUMG00000185871.2 980 980 1 ENSG00000218716.1 RPL12P23 chr6 170199769 170200258 + processed_pseudogene KNOWN OTTHUMG00000016074.1 490 490 1 ENSG00000180869.4 LINC01555 chr1 84628230 84635020 - lincRNA KNOWN OTTHUMG00000009923.1 6791 2884 3 ENSG00000230960.1 RP5-1086L22.1 chr6 170254334 170262569 - antisense NOVEL OTTHUMG00000016075.1 8236 1330 3 ENSG00000271820.1 RP5-894D12.5 chr6 170266669 170276762 - lincRNA NOVEL OTTHUMG00000185351.1 10094 1953 3 ENSG00000227508.5 FLJ38122 chr6 170272474 170279887 + lincRNA NOVEL OTTHUMG00000016077.2 7414 3611 6 ENSG00000198719.8 DLL1 chr6 170282206 170306565 - protein_coding KNOWN OTTHUMG00000016078.2 24360 3226 14 ENSG00000112584.12 FAM120B chr6 170290703 170407065 + protein_coding KNOWN OTTHUMG00000016080.5 116363 6029 44 ENSG00000271234.1 RP5-894D12.4 chr6 170297876 170298375 - lincRNA NOVEL OTTHUMG00000185240.1 500 500 1 ENSG00000266245.1 MIR4644 chr6 170330761 170330844 + miRNA KNOWN NA 84 84 1 ENSG00000261003.1 RP1-140C12.2 chr6 170414139 170419325 + sense_overlapping NOVEL OTTHUMG00000175952.1 5187 5187 1 ENSG00000008018.8 PSMB1 chr6 170535117 170553341 - protein_coding KNOWN OTTHUMG00000016087.2 18225 2256 11 ENSG00000112592.11 TBP chr6 170554302 170572870 + protein_coding KNOWN OTTHUMG00000016084.2 18569 2038 43 ENSG00000232622.1 RP11-484D4.3 chr1 84636158 84637106 - processed_pseudogene KNOWN OTTHUMG00000057591.1 949 247 2 ENSG00000071994.9 PDCD2 chr6 170575295 170584692 - protein_coding KNOWN OTTHUMG00000016083.5 9398 6476 69 ENSG00000217874.2 OR4F7P chr6 170639606 170640536 + unprocessed_pseudogene KNOWN OTTHUMG00000016086.2 931 931 1 ENSG00000273640.1 WBP1LP8 chr6 170651012 170651338 - processed_pseudogene KNOWN OTTHUMG00000187659.1 327 327 1 ENSG00000234986.1 XX-C2158C12.1 chr6 170695313 170696950 + lincRNA NOVEL OTTHUMG00000016088.1 1638 806 3 ENSG00000213863.2 XX-C2158C12.2 chr6 170725197 170728488 + lincRNA NOVEL OTTHUMG00000016089.1 3292 758 2 ENSG00000230423.1 XX-C2158C6.1 chr6 170735751 170736545 + lincRNA NOVEL OTTHUMG00000016090.1 795 333 2 ENSG00000225532.1 XX-C2158C6.3 chr6 170736173 170737777 - lincRNA NOVEL OTTHUMG00000016092.1 1605 439 3 ENSG00000219814.2 XX-C2158C6.2 chr6 170745518 170745977 + processed_pseudogene KNOWN OTTHUMG00000016091.2 460 460 1 ENSG00000273644.1 ABC7-481722F1.1 chr7 37032 37477 + processed_pseudogene KNOWN OTTHUMG00000187654.1 446 446 1 ENSG00000232325.3 AC093627.7 chr7 70972 71835 - lincRNA NOVEL OTTHUMG00000151403.1 864 759 2 ENSG00000117155.15 SSX2IP chr1 84643707 84690803 - protein_coding KNOWN OTTHUMG00000009926.5 47097 8639 89 ENSG00000242611.1 AC093627.8 chr7 77038 80418 + lincRNA NOVEL OTTHUMG00000151400.1 3381 605 2 ENSG00000242474.1 AC093627.9 chr7 135853 149466 - lincRNA NOVEL OTTHUMG00000151405.1 13614 1449 10 ENSG00000240859.1 AC093627.10 chr7 149597 155465 + lincRNA NOVEL OTTHUMG00000151398.1 5869 5149 9 ENSG00000261795.1 RP11-90P13.1 chr7 161765 164972 - lincRNA NOVEL OTTHUMG00000173363.1 3208 3208 1 ENSG00000239715.1 AC093627.11 chr7 174920 176013 + lincRNA NOVEL OTTHUMG00000151402.1 1094 568 3 ENSG00000240093.1 AC093627.12 chr7 182935 194180 - antisense NOVEL OTTHUMG00000151397.1 11246 574 3 ENSG00000177706.8 FAM20C chr7 192969 260745 + protein_coding KNOWN OTTHUMG00000151401.4 67777 4629 24 ENSG00000249852.1 AC145676.2 chr7 227554 229557 - TEC KNOWN OTTHUMG00000160234.1 2004 2004 1 ENSG00000248999.1 WI2-2373I1.1 chr7 290651 290821 + processed_pseudogene KNOWN OTTHUMG00000160232.1 171 171 1 ENSG00000248767.1 WI2-2373I1.2 chr7 291344 294422 + lincRNA NOVEL OTTHUMG00000160231.1 3079 530 2 ENSG00000251899.1 AC104169.1 chr1 84793068 84793199 - miRNA NOVEL NA 132 132 1 ENSG00000249574.1 AC226118.1 chr7 379359 382712 + lincRNA NOVEL OTTHUMG00000160233.1 3354 2146 3 ENSG00000234471.1 AC147651.1 chr7 484107 496118 - lincRNA NOVEL OTTHUMG00000151413.1 12012 420 3 ENSG00000197461.12 PDGFA chr7 497258 520296 - protein_coding KNOWN OTTHUMG00000151412.5 23039 4151 29 ENSG00000223855.1 FLJ44511 chr7 520391 525232 + lincRNA NOVEL OTTHUMG00000151410.1 4842 3506 3 ENSG00000188191.13 PRKAR1B chr7 549197 727650 - protein_coding KNOWN OTTHUMG00000151411.4 178454 4491 89 ENSG00000252986.1 AC147651.2 chr7 550733 550813 + miRNA NOVEL NA 81 81 1 ENSG00000229380.1 AC147651.5 chr7 561958 565619 + antisense NOVEL OTTHUMG00000151415.1 3662 572 2 ENSG00000237181.1 AC147651.4 chr7 603185 608482 + antisense NOVEL OTTHUMG00000151414.1 5298 731 2 ENSG00000164818.14 DNAAF5 chr7 726701 786475 + protein_coding KNOWN OTTHUMG00000151416.2 59775 7137 48 ENSG00000164828.16 SUN1 chr7 816615 896435 + protein_coding KNOWN OTTHUMG00000151426.8 79821 11811 279 ENSG00000171517.5 LPAR3 chr1 84811602 84893213 - protein_coding KNOWN OTTHUMG00000009925.1 81612 3543 8 ENSG00000239857.5 GET4 chr7 876552 896436 + protein_coding KNOWN OTTHUMG00000112459.11 19885 5392 35 ENSG00000273151.1 RP11-449P15.2 chr7 879790 886547 - antisense NOVEL OTTHUMG00000185874.1 6758 6758 1 ENSG00000105963.12 ADAP1 chr7 897901 955407 - protein_coding KNOWN OTTHUMG00000023380.12 57507 5062 128 ENSG00000240230.4 COX19 chr7 898778 975599 - protein_coding KNOWN OTTHUMG00000151476.1 76822 5542 19 ENSG00000073067.12 CYP2W1 chr7 983199 989640 + protein_coding KNOWN OTTHUMG00000074071.3 6442 2773 27 ENSG00000146540.13 C7orf50 chr7 996986 1138260 - protein_coding KNOWN OTTHUMG00000151477.5 141275 4961 35 ENSG00000199023.2 MIR339 chr7 1022935 1023045 - miRNA KNOWN NA 111 111 1 ENSG00000225146.1 AC073957.15 chr7 1029025 1043891 + antisense NOVEL OTTHUMG00000151482.1 14867 535 2 ENSG00000164849.8 GPR146 chr7 1044576 1059261 + protein_coding KNOWN OTTHUMG00000023934.5 14686 3160 11 ENSG00000257607.1 RP11-449P15.1 chr7 1055360 1059261 - antisense NOVEL OTTHUMG00000169520.1 3902 1562 2 ENSG00000153898.11 MCOLN2 chr1 84925583 84997113 - protein_coding KNOWN OTTHUMG00000009954.4 71531 3442 57 ENSG00000224079.1 AC091729.7 chr7 1074450 1078036 + antisense NOVEL OTTHUMG00000151481.1 3587 869 3 ENSG00000226291.1 AC091729.8 chr7 1080863 1082178 + antisense NOVEL OTTHUMG00000151483.1 1316 302 2 ENSG00000164850.13 GPER1 chr7 1082208 1093815 + protein_coding KNOWN OTTHUMG00000023680.3 11608 3149 16 ENSG00000178381.10 ZFAND2A chr7 1152071 1160759 - protein_coding KNOWN OTTHUMG00000119019.3 8689 2281 26 ENSG00000229043.2 AC091729.9 chr7 1160374 1165267 + antisense NOVEL OTTHUMG00000151480.1 4894 2002 10 ENSG00000164853.8 UNCX chr7 1232907 1237318 + protein_coding KNOWN OTTHUMG00000152022.2 4412 2048 3 ENSG00000233082.1 AC073094.4 chr7 1267353 1269267 + lincRNA NOVEL OTTHUMG00000152023.1 1915 433 2 ENSG00000164877.17 MICALL2 chr7 1428465 1459502 - protein_coding KNOWN OTTHUMG00000119021.5 31038 8843 100 ENSG00000225981.1 AC102953.4 chr7 1459937 1464008 + antisense NOVEL OTTHUMG00000151454.1 4072 498 2 ENSG00000273230.1 RP11-1246C19.1 chr7 1464497 1467522 - lincRNA NOVEL OTTHUMG00000185875.1 3026 3026 1 ENSG00000162643.11 WDR63 chr1 84999147 85133138 + protein_coding KNOWN OTTHUMG00000009953.4 133992 3923 98 ENSG00000164880.14 INTS1 chr7 1470277 1504367 - protein_coding KNOWN OTTHUMG00000151449.4 34091 9062 83 ENSG00000231927.1 AC102953.6 chr7 1508655 1509427 - antisense NOVEL OTTHUMG00000151728.1 773 242 2 ENSG00000198517.8 MAFK chr7 1530714 1543043 + protein_coding KNOWN OTTHUMG00000151453.1 12330 4458 10 ENSG00000164855.14 TMEM184A chr7 1542235 1560821 - protein_coding KNOWN OTTHUMG00000119025.11 18587 7805 58 ENSG00000157778.7 PSMG3 chr7 1567330 1571005 - protein_coding KNOWN OTTHUMG00000119043.2 3676 1960 8 ENSG00000230487.6 PSMG3-AS1 chr7 1570073 1589626 + lincRNA NOVEL OTTHUMG00000151452.3 19554 6355 32 ENSG00000230444.1 TFAMP1 chr7 1614590 1615325 + processed_pseudogene KNOWN OTTHUMG00000151494.1 736 736 1 ENSG00000231476.1 AC074389.5 chr7 1620654 1621405 + lincRNA NOVEL OTTHUMG00000151498.1 752 437 2 ENSG00000225968.6 ELFN1 chr7 1688119 1747954 + protein_coding KNOWN OTTHUMG00000151495.2 59836 3845 5 ENSG00000234977.1 AC074389.7 chr7 1691906 1692450 - lincRNA NOVEL OTTHUMG00000151492.1 545 454 2 ENSG00000055732.11 MCOLN3 chr1 85018082 85048499 - protein_coding KNOWN OTTHUMG00000009955.3 30418 6623 52 ENSG00000205971.2 AC074389.6 chr7 1692810 1694325 - lincRNA NOVEL OTTHUMG00000151500.1 1516 1423 3 ENSG00000236081.1 ELFN1-AS1 chr7 1738630 1742291 - lincRNA NOVEL OTTHUMG00000151496.1 3662 989 4 ENSG00000266391.1 AC074389.1 chr7 1780694 1780791 - miRNA NOVEL NA 98 98 1 ENSG00000002822.14 MAD1L1 chr7 1815793 2233243 - protein_coding KNOWN OTTHUMG00000151493.3 417451 7230 144 ENSG00000176349.10 AC110781.3 chr7 1838586 1849931 + antisense NOVEL OTTHUMG00000151497.1 11346 4764 4 ENSG00000265089.1 MIR4655 chr7 1844180 1844253 - miRNA KNOWN NA 74 74 1 ENSG00000122687.16 FTSJ2 chr7 2234231 2242198 - protein_coding KNOWN OTTHUMG00000023866.5 7968 2843 15 ENSG00000106268.14 NUDT1 chr7 2242222 2251146 + protein_coding KNOWN OTTHUMG00000023072.4 8925 2093 32 ENSG00000106266.7 SNX8 chr7 2251770 2354318 - protein_coding KNOWN OTTHUMG00000151512.2 102549 5773 46 ENSG00000277102.1 MIR6836 chr7 2257515 2257577 - miRNA KNOWN NA 63 63 1 ENSG00000226374.1 RP13-614K11.2 chr1 3947149 3948980 - lincRNA NOVEL OTTHUMG00000000731.1 1832 937 3 ENSG00000266110.1 MIR4423 chr1 85133794 85133873 + miRNA KNOWN NA 80 80 1 ENSG00000271098.1 IMMP1LP3 chr7 2287915 2288428 + processed_pseudogene KNOWN OTTHUMG00000184490.1 514 224 2 ENSG00000106263.16 EIF3B chr7 2354086 2380745 + protein_coding KNOWN OTTHUMG00000022839.4 26660 8998 82 ENSG00000230914.2 AC004840.8 chr7 2384121 2388597 + lincRNA NOVEL OTTHUMG00000151516.1 4477 608 2 ENSG00000271163.1 RP4-607J2.1 chr7 2393847 2394131 - processed_pseudogene KNOWN OTTHUMG00000184629.1 285 285 1 ENSG00000136213.9 CHST12 chr7 2403560 2448483 + protein_coding KNOWN OTTHUMG00000023849.5 44924 16143 8 ENSG00000275572.1 GRIFIN chr7 2474844 2476894 - protein_coding KNOWN OTTHUMG00000152042.4 2051 870 8 ENSG00000106003.11 LFNG chr7 2512529 2529177 + protein_coding KNOWN OTTHUMG00000152043.1 16649 3418 56 ENSG00000264357.1 MIR4648 chr7 2527074 2527145 + miRNA KNOWN NA 72 72 1 ENSG00000106009.14 BRAT1 chr7 2537877 2555727 - protein_coding KNOWN OTTHUMG00000119091.4 17851 6639 48 ENSG00000106012.16 IQCE chr7 2558972 2614734 + protein_coding KNOWN OTTHUMG00000152047.7 55763 9240 230 ENSG00000280099.1 RP11-33E12.2 chr1 85152487 85154203 - TEC KNOWN OTTHUMG00000170856.1 1717 1717 1 ENSG00000136295.13 TTYH3 chr7 2631951 2664802 + protein_coding KNOWN OTTHUMG00000152050.2 32852 6129 53 ENSG00000174945.12 AMZ1 chr7 2679522 2775500 + protein_coding KNOWN OTTHUMG00000152111.2 95979 7011 27 ENSG00000146535.12 GNA12 chr7 2728112 2844324 - protein_coding KNOWN OTTHUMG00000023064.4 116213 6120 27 ENSG00000231357.1 AC006028.11 chr7 2835621 2836022 + processed_pseudogene KNOWN OTTHUMG00000152109.1 402 402 1 ENSG00000198286.8 CARD11 chr7 2906141 3043945 - protein_coding KNOWN OTTHUMG00000023023.5 137805 4707 40 ENSG00000237286.1 AC004906.3 chr7 2944035 2947091 + antisense NOVEL OTTHUMG00000152115.2 3057 969 2 ENSG00000201794.1 RN7SKP130 chr7 2999094 2999394 + misc_RNA KNOWN NA 301 301 1 ENSG00000228334.1 AC024028.1 chr7 3083252 3086421 - lincRNA NOVEL OTTHUMG00000152116.1 3170 437 2 ENSG00000217455.7 AC091801.1 chr7 3140234 3174654 - lincRNA NOVEL OTTHUMG00000152117.1 34421 1725 15 ENSG00000231892.1 AC073316.2 chr7 3196626 3198256 - lincRNA NOVEL OTTHUMG00000151735.1 1631 418 3 ENSG00000097096.8 SYDE2 chr1 85156873 85201046 - protein_coding KNOWN OTTHUMG00000009956.4 44174 6451 10 ENSG00000236708.1 AC073316.1 chr7 3264032 3302452 - antisense NOVEL OTTHUMG00000151736.1 38421 982 2 ENSG00000146555.17 SDK1 chr7 3301448 4269000 + protein_coding KNOWN OTTHUMG00000151733.3 967553 12062 174 ENSG00000224593.1 RP11-30B1.1 chr7 3337889 3338601 + transcribed_processed_pseudogene KNOWN OTTHUMG00000157132.2 713 713 2 ENSG00000211544.1 AC069286.1 chr7 3419067 3419149 + miRNA NOVEL NA 83 83 1 ENSG00000236510.1 AC011284.3 chr7 3642815 3643784 - antisense NOVEL OTTHUMG00000151734.1 970 856 2 ENSG00000274335.1 AC004984.1 chr7 3840518 3840590 - miRNA NOVEL NA 73 73 1 ENSG00000261809.1 CYP3A54P chr7 4511959 4512033 - processed_pseudogene KNOWN OTTHUMG00000172693.1 75 75 1 ENSG00000164916.10 FOXK1 chr7 4682309 4771443 + protein_coding KNOWN OTTHUMG00000151739.4 89135 13093 13 ENSG00000242802.5 AP5Z1 chr7 4775622 4794312 + protein_coding KNOWN OTTHUMG00000151754.1 18691 6873 63 ENSG00000264474.1 MIR4656 chr7 4788565 4788639 - miRNA KNOWN NA 75 75 1 ENSG00000162642.12 C1orf52 chr1 85249953 85259672 - protein_coding KNOWN OTTHUMG00000009966.3 9720 3420 14 ENSG00000157927.15 RADIL chr7 4797055 4883719 - protein_coding KNOWN OTTHUMG00000151753.2 86665 6516 55 ENSG00000206895.1 Y_RNA chr7 4811188 4811289 - misc_RNA NOVEL NA 102 102 1 ENSG00000218823.1 PAPOLB chr7 4857733 4861994 - protein_coding KNOWN OTTHUMG00000151759.2 4262 4262 1 ENSG00000213935.3 AC092610.12 chr7 4865432 4865804 - processed_pseudogene KNOWN OTTHUMG00000151757.1 373 373 1 ENSG00000136297.13 MMD2 chr7 4905989 4959213 - protein_coding KNOWN OTTHUMG00000151844.2 53225 2466 29 ENSG00000196204.10 RNF216P1 chr7 4973988 5040675 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000151797.12 66688 5510 60 ENSG00000272968.4 RBAK-RBAKDN chr7 4983718 5073221 + protein_coding KNOWN OTTHUMG00000186010.2 89504 1049 14 ENSG00000270822.1 RP11-730B22.1 chr7 5009164 5009328 - processed_pseudogene KNOWN OTTHUMG00000184646.1 165 165 1 ENSG00000275328.1 RP11-730B22.4 chr7 5031608 5037831 - unprocessed_pseudogene KNOWN OTTHUMG00000187656.1 6224 713 6 ENSG00000146587.16 RBAK chr7 5045821 5069488 + protein_coding KNOWN OTTHUMG00000121155.2 23668 6960 14 ENSG00000223254.1 Y_RNA chr1 85264296 85264402 + misc_RNA NOVEL NA 107 107 1 ENSG00000273313.1 RBAKDN chr7 5072125 5073223 + lincRNA KNOWN OTTHUMG00000186012.1 1099 514 3 ENSG00000272595.1 OR10AH1P chr7 5117169 5118087 + unprocessed_pseudogene KNOWN OTTHUMG00000185863.1 919 919 1 ENSG00000159904.10 ZNF890P chr7 5121239 5144546 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000166790.1 23308 1737 9 ENSG00000202039.1 RNU6-215P chr7 5180061 5180162 + snRNA KNOWN NA 102 102 1 ENSG00000157954.13 WIPI2 chr7 5190188 5233826 + protein_coding KNOWN OTTHUMG00000121179.4 43639 8977 110 ENSG00000164638.9 SLC29A4 chr7 5274369 5306870 + protein_coding KNOWN OTTHUMG00000023797.6 32502 5811 46 ENSG00000263808.1 AC093376.1 chr7 5276336 5276415 + miRNA NOVEL NA 80 80 1 ENSG00000182095.13 TNRC18 chr7 5306790 5425414 - protein_coding KNOWN OTTHUMG00000151831.7 118625 12572 89 ENSG00000241269.1 AC093620.5 chr7 5419827 5420767 + antisense NOVEL OTTHUMG00000151804.1 941 583 2 ENSG00000188365.3 AC092171.2 chr7 5419846 5423122 + antisense NOVEL OTTHUMG00000151810.1 3277 753 2 ENSG00000142867.11 BCL10 chr1 85266248 85277090 - protein_coding KNOWN OTTHUMG00000009965.2 10843 2819 7 ENSG00000272953.1 RP11-1275H24.2 chr7 5425770 5426401 + lincRNA NOVEL OTTHUMG00000186130.1 632 632 1 ENSG00000234432.4 RP11-1275H24.1 chr7 5426277 5428927 - lincRNA NOVEL OTTHUMG00000186131.1 2651 2651 1 ENSG00000273084.1 RP11-1275H24.3 chr7 5428731 5429672 + lincRNA NOVEL OTTHUMG00000186132.1 942 942 1 ENSG00000155034.17 FBXL18 chr7 5431335 5513798 - protein_coding KNOWN OTTHUMG00000151832.1 82464 5088 24 ENSG00000230733.2 AC092171.4 chr7 5475804 5479811 + lincRNA NOVEL OTTHUMG00000151833.2 4008 3251 2 ENSG00000207973.1 MIR589 chr7 5495819 5495917 - miRNA KNOWN NA 99 99 1 ENSG00000075624.12 ACTB chr7 5527151 5563784 - protein_coding KNOWN OTTHUMG00000023268.6 36634 3256 52 ENSG00000263900.1 AC006483.1 chr7 5528103 5528186 - miRNA NOVEL NA 84 84 1 ENSG00000272719.1 CTB-161C1.1 chr7 5556731 5557245 + antisense NOVEL OTTHUMG00000186133.1 515 515 1 ENSG00000228974.5 AC006483.5 chr7 5560743 5561055 + processed_pseudogene KNOWN OTTHUMG00000151811.1 313 313 1 ENSG00000223653.4 RP11-131L23.1 chr1 85276715 85448124 + antisense NOVEL OTTHUMG00000010579.1 171410 2277 8 ENSG00000075618.16 FSCN1 chr7 5592823 5606655 + protein_coding KNOWN OTTHUMG00000090599.4 13833 3692 21 ENSG00000011275.17 RNF216 chr7 5620047 5781739 - protein_coding KNOWN OTTHUMG00000155500.2 161693 7619 77 ENSG00000237738.1 RNF216-IT1 chr7 5662432 5680461 - sense_intronic NOVEL OTTHUMG00000155498.1 18030 337 3 ENSG00000235944.6 ZNF815P chr7 5823160 5854435 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155501.2 31276 2362 22 ENSG00000277265.1 Metazoa_SRP chr7 5871753 5872050 - misc_RNA NOVEL NA 298 298 1 ENSG00000122543.9 OCM chr7 5879827 5886362 + protein_coding KNOWN OTTHUMG00000155499.1 6536 832 9 ENSG00000122674.10 CCZ1 chr7 5898725 5926550 + protein_coding KNOWN OTTHUMG00000155502.1 27826 6431 43 ENSG00000155026.15 RSPH10B chr7 5925550 5970683 - protein_coding KNOWN OTTHUMG00000152378.6 45134 4993 102 ENSG00000122512.13 PMS2 chr7 5973239 6009125 - protein_coding KNOWN OTTHUMG00000023135.7 35887 3936 62 ENSG00000201990.1 Y_RNA chr7 6004283 6004385 - misc_RNA NOVEL NA 103 103 1 ENSG00000264380.1 AL590113.1 chr1 85284610 85284673 + miRNA NOVEL NA 64 64 1 ENSG00000106305.8 AIMP2 chr7 6009245 6023834 + protein_coding KNOWN OTTHUMG00000122077.4 14590 1838 15 ENSG00000207217.1 SNORA42 chr7 6016877 6017011 + snoRNA NOVEL NA 135 135 1 ENSG00000086232.11 EIF2AK1 chr7 6022244 6059230 - protein_coding KNOWN OTTHUMG00000090689.13 36987 5550 54 ENSG00000157999.5 ANKRD61 chr7 6031376 6036386 + protein_coding KNOWN OTTHUMG00000154561.1 5011 1257 3 ENSG00000240718.3 RN7SL851P chr7 6047721 6048023 - misc_RNA KNOWN NA 303 303 1 ENSG00000252929.1 RNU6-218P chr7 6057500 6057604 + snRNA KNOWN NA 105 105 1 ENSG00000231704.4 AC004895.4 chr7 6081103 6093085 + lincRNA NOVEL OTTHUMG00000151887.1 11983 820 11 ENSG00000106346.10 USP42 chr7 6104884 6161564 + protein_coding KNOWN OTTHUMG00000151888.3 56681 7072 92 ENSG00000008256.14 CYTH3 chr7 6161776 6272644 - protein_coding KNOWN OTTHUMG00000023440.3 110869 5808 58 ENSG00000278065.1 AC004895.1 chr7 6185275 6185360 - miRNA NOVEL NA 86 86 1 ENSG00000153904.17 DDAH1 chr1 85318481 85578363 - protein_coding KNOWN OTTHUMG00000010578.4 259883 5889 50 ENSG00000202273.1 Y_RNA chr7 6212638 6212740 - misc_RNA NOVEL NA 103 103 1 ENSG00000178397.11 FAM220A chr7 6329409 6348981 - protein_coding KNOWN OTTHUMG00000122091.4 19573 2395 13 ENSG00000274319.1 RP11-425P5.1 chr7 6365441 6365770 + processed_pseudogene KNOWN OTTHUMG00000187658.1 330 330 1 ENSG00000136238.16 RAC1 chr7 6374523 6403977 + protein_coding KNOWN OTTHUMG00000023540.4 29455 3114 30 ENSG00000164535.13 DAGLB chr7 6409126 6484190 - protein_coding KNOWN OTTHUMG00000125513.3 75065 5756 79 ENSG00000136240.8 KDELR2 chr7 6445953 6484242 - protein_coding KNOWN OTTHUMG00000023103.4 38290 3990 20 ENSG00000231359.3 AC072052.7 chr7 6490793 6491098 - processed_pseudogene KNOWN OTTHUMG00000155529.1 306 306 1 ENSG00000215045.7 GRID2IP chr7 6497462 6551436 - protein_coding KNOWN OTTHUMG00000155531.1 53975 4134 64 ENSG00000136247.13 ZDHHC4 chr7 6577434 6589374 + protein_coding KNOWN OTTHUMG00000023579.5 11941 3557 76 ENSG00000232581.1 AC079742.4 chr7 6578565 6588974 - antisense NOVEL OTTHUMG00000151848.1 10410 357 2 ENSG00000199459.1 Y_RNA chr1 85435175 85435284 - misc_RNA NOVEL NA 110 110 1 ENSG00000146576.11 C7orf26 chr7 6590017 6608726 + protein_coding KNOWN OTTHUMG00000125517.2 18710 2728 28 ENSG00000236609.3 ZNF853 chr7 6615617 6624290 + protein_coding KNOWN OTTHUMG00000151853.3 8674 3857 3 ENSG00000205903.5 ZNF316 chr7 6637322 6656432 + protein_coding KNOWN OTTHUMG00000151854.3 19111 5811 18 ENSG00000228010.4 AC073343.13 chr7 6663974 6708901 + antisense NOVEL OTTHUMG00000152372.1 44928 1374 9 ENSG00000198580.7 RP11-611L7.2 chr7 6673494 6676366 + unprocessed_pseudogene KNOWN OTTHUMG00000187157.1 2873 651 5 ENSG00000164631.17 ZNF12 chr7 6688433 6706923 - protein_coding KNOWN OTTHUMG00000151910.2 18491 5297 23 ENSG00000265245.1 AC073343.1 chr7 6691977 6692059 + miRNA NOVEL NA 83 83 1 ENSG00000187953.9 PMS2CL chr7 6710128 6753862 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000151857.1 43735 3879 27 ENSG00000277327.1 RP11-611L7.3 chr7 6715630 6720982 - unprocessed_pseudogene KNOWN OTTHUMG00000187660.1 5353 632 5 ENSG00000169402.14 RSPH10B2 chr7 6754109 6799365 + protein_coding KNOWN OTTHUMG00000151856.7 45257 4992 111 ENSG00000229280.1 EEF1DP6 chr1 4175528 4175899 - processed_pseudogene KNOWN OTTHUMG00000000732.1 372 372 1 ENSG00000273264.1 RP11-131L23.2 chr1 85467295 85467660 + lincRNA NOVEL OTTHUMG00000186153.1 366 366 1 ENSG00000146574.14 CCZ1B chr7 6794134 6826770 - protein_coding KNOWN OTTHUMG00000152441.3 32637 7316 74 ENSG00000273252.1 OR7E39P chr7 6835420 6835794 - unprocessed_pseudogene KNOWN OTTHUMG00000185867.1 375 375 1 ENSG00000155070.8 UNC93B2 chr7 6855485 6859830 - processed_pseudogene KNOWN OTTHUMG00000151911.1 4346 730 3 ENSG00000205897.5 OR7E136P chr7 6866658 6867672 - unprocessed_pseudogene KNOWN OTTHUMG00000158488.1 1015 1015 1 ENSG00000263457.1 AC079804.1 chr7 6878545 6878632 - miRNA NOVEL NA 88 88 1 ENSG00000250561.2 OR7E59P chr7 6879627 6880626 - unprocessed_pseudogene KNOWN OTTHUMG00000158490.2 1000 1000 1 ENSG00000243531.1 RP11-740N7.3 chr7 6900424 6900623 - processed_pseudogene KNOWN OTTHUMG00000158494.1 200 200 1 ENSG00000226943.3 ALG1L5P chr7 6923804 6930835 + unprocessed_pseudogene KNOWN OTTHUMG00000158492.1 7032 771 8 ENSG00000241539.1 RP11-740N7.4 chr7 6924078 6924513 - processed_pseudogene KNOWN OTTHUMG00000158491.1 436 436 1 ENSG00000242731.3 FAM86LP chr7 6931684 6939603 - unprocessed_pseudogene KNOWN OTTHUMG00000158493.1 7920 853 6 ENSG00000272691.1 RP11-290M5.4 chr1 85578500 85578742 - lincRNA NOVEL OTTHUMG00000186154.1 243 243 1 ENSG00000264679.1 AC092104.2 chr7 7066611 7066692 - miRNA NOVEL NA 82 82 1 ENSG00000266287.1 MIR3683 chr7 7066964 7067045 - miRNA KNOWN NA 82 82 1 ENSG00000263504.1 AC092104.1 chr7 7067367 7067449 - miRNA NOVEL NA 83 83 1 ENSG00000265155.1 AC092104.3 chr7 7068044 7068126 - miRNA NOVEL NA 83 83 1 ENSG00000266409.1 AC092104.5 chr7 7068187 7068269 - miRNA NOVEL NA 83 83 1 ENSG00000266121.1 AC092104.4 chr7 7068823 7068904 - miRNA NOVEL NA 82 82 1 ENSG00000239696.3 RP11-397J20.1 chr7 7078302 7079742 - processed_pseudogene KNOWN OTTHUMG00000158489.2 1441 1441 1 ENSG00000201218.1 Y_RNA chr7 7102573 7102681 - misc_RNA NOVEL NA 109 109 1 ENSG00000106392.9 C1GALT1 chr7 7156934 7248651 + protein_coding KNOWN OTTHUMG00000151912.3 91718 7805 21 ENSG00000244167.1 RP4-733B9.1 chr7 7177952 7178324 + processed_pseudogene KNOWN OTTHUMG00000158487.1 373 373 1 ENSG00000142871.14 CYR61 chr1 85580761 85583962 + protein_coding KNOWN OTTHUMG00000010577.1 3202 2455 14 ENSG00000230825.1 AC005532.5 chr7 7255154 7277779 + processed_transcript NOVEL OTTHUMG00000151907.1 22626 1237 8 ENSG00000236712.1 AC079448.1 chr7 7293508 7293880 + processed_pseudogene KNOWN OTTHUMG00000152425.1 373 373 1 ENSG00000215018.8 COL28A1 chr7 7356203 7535853 - protein_coding KNOWN OTTHUMG00000150034.2 179651 6619 72 ENSG00000272732.1 RP5-1159O4.2 chr7 7550104 7552440 - lincRNA NOVEL OTTHUMG00000186148.1 2337 1655 2 ENSG00000272894.4 RP5-1159O4.1 chr7 7552462 7566996 - lincRNA NOVEL OTTHUMG00000186149.1 14535 1730 8 ENSG00000164654.14 MIOS chr7 7566872 7608929 + protein_coding KNOWN OTTHUMG00000152440.2 42058 6714 49 ENSG00000272745.1 RP5-1007H16.1 chr7 7619872 7620543 + lincRNA NOVEL OTTHUMG00000186159.1 672 672 1 ENSG00000106399.10 RPA3 chr7 7636518 7718607 - protein_coding KNOWN OTTHUMG00000023748.5 82090 3232 27 ENSG00000219545.8 UMAD1 chr7 7640711 8004059 + antisense NOVEL OTTHUMG00000152007.3 363349 3549 29 ENSG00000270314.1 GS1-165B14.2 chr7 7735743 7736851 - processed_pseudogene KNOWN OTTHUMG00000184637.1 1109 1109 1 ENSG00000199934.1 SNORD81 chr1 85592280 85592356 + snoRNA NOVEL NA 77 77 1 ENSG00000234718.6 AC007161.5 chr7 7738524 7742574 - lincRNA NOVEL OTTHUMG00000152016.6 4051 1496 7 ENSG00000269721.1 RPL23AP51 chr7 7742091 7742535 - transcribed_processed_pseudogene KNOWN OTTHUMG00000182603.1 445 445 1 ENSG00000201747.1 RNU6-534P chr7 7906519 7906624 + snRNA KNOWN NA 106 106 1 ENSG00000214998.2 CCNB2P1 chr7 7909300 7910449 - processed_pseudogene KNOWN OTTHUMG00000152021.1 1150 1150 1 ENSG00000234141.1 AC009473.1 chr7 7949853 7950709 - antisense NOVEL OTTHUMG00000152026.1 857 692 2 ENSG00000233108.1 AC006042.7 chr7 7958183 7969903 - antisense NOVEL OTTHUMG00000152017.1 11721 568 2 ENSG00000106415.11 GLCCI1 chr7 7968794 8094272 + protein_coding KNOWN OTTHUMG00000151984.3 125479 6885 56 ENSG00000233264.2 AC006042.8 chr7 7980312 7982228 + processed_pseudogene KNOWN OTTHUMG00000152027.1 1917 1469 3 ENSG00000003147.16 ICA1 chr7 8113184 8262687 - protein_coding KNOWN OTTHUMG00000152008.7 149504 4891 155 ENSG00000227719.1 AC006042.6 chr7 8114025 8116561 + antisense NOVEL OTTHUMG00000152019.1 2537 524 3 ENSG00000230285.1 RP11-290M5.2 chr1 85599131 85600734 + lincRNA NOVEL OTTHUMG00000010575.1 1604 255 2 ENSG00000265212.2 AC007009.2 chr7 8154916 8155027 + miRNA NOVEL NA 112 112 1 ENSG00000244239.1 AC007009.1 chr7 8262233 8262821 + antisense NOVEL OTTHUMG00000152018.1 589 429 2 ENSG00000229970.3 AC007128.1 chr7 8262264 8344516 + antisense NOVEL OTTHUMG00000185587.1 82253 1853 7 ENSG00000272328.1 RP4-594A5.1 chr7 8303741 8341343 + lincRNA NOVEL OTTHUMG00000151948.3 37603 916 5 ENSG00000122584.11 NXPH1 chr7 8433955 8752963 + protein_coding KNOWN OTTHUMG00000151941.2 319009 3430 11 ENSG00000236748.1 AC009500.2 chr7 8938787 8939369 + processed_pseudogene KNOWN OTTHUMG00000152006.1 583 583 1 ENSG00000278254.3 RP4-668E10.4 chr7 9082557 9189857 - lincRNA NOVEL OTTHUMG00000189027.1 107301 3362 10 ENSG00000271526.1 RP4-668E10.2 chr7 9084022 9084175 + processed_pseudogene KNOWN OTTHUMG00000184488.1 154 154 1 ENSG00000278446.1 RP4-668E10.3 chr7 9170948 9171273 - processed_pseudogene KNOWN OTTHUMG00000187664.1 326 326 1 ENSG00000264766.1 AC079756.1 chr7 9594617 9594723 - miRNA NOVEL NA 107 107 1 ENSG00000117174.9 ZNHIT6 chr1 85649423 85708433 - protein_coding KNOWN OTTHUMG00000010576.1 59011 6197 21 ENSG00000233876.2 GAPDHP68 chr7 9614978 9615985 + processed_pseudogene KNOWN OTTHUMG00000151930.2 1008 1008 1 ENSG00000271077.1 AC096553.5 chr7 9634270 9635703 + processed_pseudogene KNOWN OTTHUMG00000151929.2 1434 829 2 ENSG00000197320.5 AC060834.2 chr7 9726241 9728272 + processed_pseudogene KNOWN OTTHUMG00000151926.1 2032 2032 1 ENSG00000234710.1 AC060834.3 chr7 9737322 9769513 + lincRNA NOVEL OTTHUMG00000151925.1 32192 618 5 ENSG00000270611.1 GS1-69O6.1 chr7 9850924 9851386 + processed_pseudogene KNOWN OTTHUMG00000184487.1 463 463 1 ENSG00000235431.1 AC006373.1 chr7 9961024 9981817 + lincRNA NOVEL OTTHUMG00000151921.1 20794 361 3 ENSG00000212422.2 U3 chr7 10222797 10223011 + snoRNA NOVEL NA 215 215 1 ENSG00000229091.2 HSPA8P8 chr7 10451311 10452526 + processed_pseudogene KNOWN OTTHUMG00000151920.1 1216 1216 1 ENSG00000234356.1 AC009945.4 chr7 10476581 10476878 + processed_pseudogene KNOWN OTTHUMG00000151924.1 298 298 1 ENSG00000236414.1 AC004535.2 chr7 10702676 10707406 + lincRNA NOVEL OTTHUMG00000151923.1 4731 449 2 ENSG00000171502.13 COL24A1 chr1 85729233 86156943 - protein_coding KNOWN OTTHUMG00000010629.5 427711 9568 130 ENSG00000201774.1 Y_RNA chr7 10901978 10902074 + misc_RNA NOVEL NA 97 97 1 ENSG00000189043.8 NDUFA4 chr7 10931951 10940256 - protein_coding KNOWN OTTHUMG00000023880.5 8306 3556 17 ENSG00000271185.1 RP5-855F16.1 chr7 10940423 10940735 + lincRNA NOVEL OTTHUMG00000185253.1 313 313 1 ENSG00000106443.13 PHF14 chr7 10973872 11169623 + protein_coding KNOWN OTTHUMG00000150463.3 195752 8727 99 ENSG00000230370.1 AC005007.3 chr7 11006399 11006876 - processed_pseudogene KNOWN OTTHUMG00000152347.1 478 478 1 ENSG00000230333.5 AC004538.3 chr7 11180902 11520175 + processed_transcript NOVEL OTTHUMG00000152311.6 339274 5660 55 ENSG00000226827.1 NPM1P11 chr7 11257681 11258535 - processed_pseudogene KNOWN OTTHUMG00000152312.1 855 855 1 ENSG00000005108.14 THSD7A chr7 11370357 11832198 - protein_coding KNOWN OTTHUMG00000152346.4 461842 10929 65 ENSG00000230435.1 AC004160.4 chr7 11406955 11414078 + antisense NOVEL OTTHUMG00000152344.1 7124 563 3 ENSG00000235920.1 AC073109.2 chr7 11820317 11821294 - processed_pseudogene KNOWN OTTHUMG00000152345.1 978 978 1 ENSG00000201620.1 RNA5SP51 chr1 85883680 85883798 - rRNA KNOWN NA 119 119 1 ENSG00000106460.17 TMEM106B chr7 12211241 12243367 + protein_coding KNOWN OTTHUMG00000125537.5 32127 13867 40 ENSG00000146530.10 VWDE chr7 12330885 12403941 - protein_coding KNOWN OTTHUMG00000152315.6 73057 6490 121 ENSG00000274970.1 RP11-472F21.1 chr7 12439419 12440404 - processed_pseudogene KNOWN OTTHUMG00000187665.1 986 986 1 ENSG00000236048.2 AC013470.6 chr7 12471352 12472545 + processed_pseudogene KNOWN OTTHUMG00000152382.1 1194 1194 1 ENSG00000203523.3 TAS2R2P chr7 12491095 12492004 + processed_pseudogene KNOWN OTTHUMG00000152381.1 910 910 1 ENSG00000226690.5 AC005281.1 chr7 12496429 12541910 + lincRNA NOVEL OTTHUMG00000152383.3 45482 1242 14 ENSG00000224667.1 AC013470.8 chr7 12506007 12507478 + processed_pseudogene KNOWN OTTHUMG00000152380.2 1472 462 3 ENSG00000225606.1 AC005281.2 chr7 12570125 12571392 - antisense NOVEL OTTHUMG00000152384.1 1268 911 2 ENSG00000006747.13 SCIN chr7 12570577 12660179 + protein_coding KNOWN OTTHUMG00000152385.3 89603 11623 74 ENSG00000229233.1 CTD-2320J21.2 chr7 12654179 12654985 + sense_overlapping NOVEL OTTHUMG00000190259.1 807 432 2 ENSG00000229505.1 RP4-682E18.1 chr1 86029854 86030589 + processed_pseudogene KNOWN OTTHUMG00000010628.1 736 736 1 ENSG00000271253.1 CTD-2320J21.1 chr7 12685637 12686033 + processed_pseudogene KNOWN OTTHUMG00000184480.1 397 397 1 ENSG00000122644.11 ARL4A chr7 12686856 12690934 + protein_coding KNOWN OTTHUMG00000023374.3 4079 3561 13 ENSG00000199470.1 SNORA64 chr7 12700758 12700889 - snoRNA NOVEL NA 132 132 1 ENSG00000222974.1 RN7SKP228 chr7 12876684 12876946 + misc_RNA KNOWN NA 263 263 1 ENSG00000230879.1 RBMX2P4 chr7 12922545 12922920 - processed_pseudogene KNOWN OTTHUMG00000152351.1 376 376 1 ENSG00000229618.1 AC011288.2 chr7 13101391 13704149 + lincRNA NOVEL OTTHUMG00000152349.2 602759 989 7 ENSG00000237713.1 AC006000.5 chr7 13339201 13365049 - lincRNA NOVEL OTTHUMG00000152350.1 25849 842 5 ENSG00000224330.1 AC005019.3 chr7 13854355 13859025 - lincRNA NOVEL OTTHUMG00000152366.1 4671 359 2 ENSG00000213875.3 AC005019.2 chr7 13871856 13872513 + processed_pseudogene KNOWN OTTHUMG00000152365.1 658 431 2 ENSG00000006468.12 ETV1 chr7 13891228 13991425 - protein_coding KNOWN OTTHUMG00000152403.5 100198 9616 189 ENSG00000122417.14 ODF2L chr1 86346824 86396342 - protein_coding KNOWN OTTHUMG00000010080.5 49519 10898 165 ENSG00000252374.1 Y_RNA chr7 14010669 14010763 - misc_RNA NOVEL NA 95 95 1 ENSG00000223445.1 RPL6P21 chr7 14070535 14071380 - processed_pseudogene KNOWN OTTHUMG00000152410.2 846 846 1 ENSG00000136267.12 DGKB chr7 14145049 14974777 - protein_coding KNOWN OTTHUMG00000152477.2 829729 9491 192 ENSG00000233167.1 EEF1A1P26 chr7 14190795 14192157 + processed_pseudogene KNOWN OTTHUMG00000152411.1 1363 1363 1 ENSG00000221428.1 AC006150.2 chr7 14775406 14775523 + miRNA NOVEL NA 118 118 1 ENSG00000226323.1 AC006150.1 chr7 14814131 14816565 + antisense NOVEL OTTHUMG00000152476.1 2435 263 3 ENSG00000225816.1 GTF3AP5 chr7 14985378 14986074 - processed_pseudogene KNOWN OTTHUMG00000152478.1 697 697 1 ENSG00000227489.1 AC006458.3 chr7 15066207 15068651 + lincRNA NOVEL OTTHUMG00000152389.1 2445 653 2 ENSG00000187546.12 AGMO chr7 15200318 15562015 - protein_coding KNOWN OTTHUMG00000152387.4 361698 3587 21 ENSG00000106511.5 MEOX2 chr7 15611212 15686812 - protein_coding KNOWN OTTHUMG00000152390.2 75601 2500 3 ENSG00000235054.1 RP5-1166F10.1 chr1 4412051 4424687 + lincRNA NOVEL OTTHUMG00000000733.1 12637 2077 6 ENSG00000278281.1 MIR7856 chr1 86357632 86357687 - miRNA KNOWN NA 56 56 1 ENSG00000237070.1 AC005550.3 chr7 15667947 15681980 + antisense NOVEL OTTHUMG00000152391.1 14034 3743 4 ENSG00000229108.1 MEOX2-AS1 chr7 15688378 15695491 + lincRNA NOVEL OTTHUMG00000152388.1 7114 697 2 ENSG00000225974.1 AC005550.5 chr7 15689075 15690854 - lincRNA NOVEL OTTHUMG00000152392.1 1780 312 2 ENSG00000235828.5 RPL36AP26 chr7 15701435 15701752 - processed_pseudogene KNOWN OTTHUMG00000152393.1 318 318 1 ENSG00000229379.1 AC006041.1 chr7 15841297 15842360 - lincRNA NOVEL OTTHUMG00000152394.1 1064 328 2 ENSG00000214960.8 ISPD chr7 16087527 16421322 - protein_coding KNOWN OTTHUMG00000152447.5 333796 6309 22 ENSG00000224683.1 RPL36AP29 chr7 16208945 16209265 + processed_pseudogene KNOWN OTTHUMG00000152449.1 321 321 1 ENSG00000229688.6 ISPD-AS1 chr7 16210488 16270604 + antisense NOVEL OTTHUMG00000152466.2 60117 2772 19 ENSG00000171243.7 SOSTDC1 chr7 16461481 16530580 - protein_coding KNOWN OTTHUMG00000090807.1 69100 2473 7 ENSG00000272537.1 GS1-166A23.1 chr7 16471184 16471373 + lincRNA NOVEL OTTHUMG00000185323.1 190 190 1 ENSG00000231349.2 RP11-444C12.1 chr1 86404176 86404866 - processed_pseudogene KNOWN OTTHUMG00000010249.2 691 691 1 ENSG00000205858.8 LRRC72 chr7 16526880 16581568 + protein_coding KNOWN OTTHUMG00000152446.2 54689 1386 16 ENSG00000224280.1 AC005014.5 chr7 16583782 16586757 - processed_pseudogene KNOWN OTTHUMG00000152445.1 2976 2976 1 ENSG00000272361.2 GS1-166A23.2 chr7 16593626 16594224 - lincRNA NOVEL OTTHUMG00000185324.2 599 599 1 ENSG00000106524.7 ANKMY2 chr7 16599776 16645817 - protein_coding KNOWN OTTHUMG00000090806.2 46042 2854 41 ENSG00000136261.13 BZW2 chr7 16646131 16706523 + protein_coding KNOWN OTTHUMG00000130755.5 60393 3662 133 ENSG00000235837.1 AC073333.8 chr7 16695871 16719898 - antisense NOVEL OTTHUMG00000152479.1 24028 648 4 ENSG00000106537.7 TSPAN13 chr7 16753535 16784536 + protein_coding KNOWN OTTHUMG00000022968.5 31002 2224 11 ENSG00000280130.1 AC073333.1 chr7 16789242 16789622 + protein_coding KNOWN NA 381 381 1 ENSG00000106541.10 AGR2 chr7 16791811 16833433 - protein_coding KNOWN OTTHUMG00000023446.4 41623 2845 36 ENSG00000270593.1 RP11-455J15.1 chr7 16849957 16850725 - processed_pseudogene KNOWN OTTHUMG00000184654.1 769 769 1 ENSG00000137975.7 CLCA2 chr1 86424086 86456558 + protein_coding KNOWN OTTHUMG00000010256.1 32473 4496 21 ENSG00000173467.7 AGR3 chr7 16859405 16881987 - protein_coding KNOWN OTTHUMG00000128411.3 22583 1160 24 ENSG00000232400.1 RAD17P1 chr7 16864267 16866308 - processed_pseudogene KNOWN OTTHUMG00000152462.2 2042 2042 1 ENSG00000227965.1 AC098592.6 chr7 16888621 16888885 + processed_pseudogene KNOWN OTTHUMG00000152465.1 265 265 1 ENSG00000223867.1 AC098592.7 chr7 16938225 16938557 + processed_pseudogene KNOWN OTTHUMG00000152464.1 333 333 1 ENSG00000232841.1 AC098592.8 chr7 17033089 17033478 - processed_pseudogene KNOWN OTTHUMG00000152463.1 390 390 1 ENSG00000278569.1 Metazoa_SRP chr7 17205652 17205928 + misc_RNA NOVEL NA 277 277 1 ENSG00000237773.4 AC003075.4 chr7 17279834 17299357 - antisense NOVEL OTTHUMG00000152468.1 19524 1607 24 ENSG00000106546.11 AHR chr7 17298622 17346152 + protein_coding KNOWN OTTHUMG00000149967.3 47531 6661 30 ENSG00000199473.1 SNORA63 chr7 17373201 17373326 - snoRNA NOVEL NA 126 126 1 ENSG00000236318.1 AC019117.1 chr7 17374867 17466664 + lincRNA NOVEL OTTHUMG00000152729.1 91798 837 4 ENSG00000016490.14 CLCA1 chr1 86468368 86500289 + protein_coding KNOWN OTTHUMG00000010254.1 31922 3340 29 ENSG00000236039.1 AC019117.2 chr7 17434477 17460672 - lincRNA NOVEL OTTHUMG00000152727.1 26196 896 8 ENSG00000226598.1 AC017060.1 chr7 17463445 17558909 - lincRNA NOVEL OTTHUMG00000152731.1 95465 442 4 ENSG00000228675.1 AC006482.1 chr7 17679549 17680659 + lincRNA NOVEL OTTHUMG00000152728.1 1111 273 2 ENSG00000071189.20 SNX13 chr7 17790761 17940501 - protein_coding KNOWN OTTHUMG00000152730.5 149741 16418 152 ENSG00000279048.1 RP11-511H23.2 chr7 17940503 17942922 + TEC KNOWN OTTHUMG00000173367.1 2420 2420 1 ENSG00000236195.1 RNMTL1P2 chr7 17962079 17963029 + processed_pseudogene KNOWN OTTHUMG00000152741.1 951 951 1 ENSG00000280340.1 RP11-511H23.1 chr7 18000290 18000879 - TEC KNOWN OTTHUMG00000173136.1 590 590 1 ENSG00000229937.5 PRPS1L1 chr7 18026774 18027863 - protein_coding KNOWN OTTHUMG00000152742.1 1090 1090 1 ENSG00000048052.20 HDAC9 chr7 18086949 19002416 + protein_coding KNOWN OTTHUMG00000152487.7 915468 16827 281 ENSG00000221393.1 MIR1302-6 chr7 18127220 18127309 - miRNA KNOWN NA 90 90 1 ENSG00000016602.9 CLCA4 chr1 86547078 86580754 + protein_coding KNOWN OTTHUMG00000010260.1 33677 3447 16 ENSG00000223030.1 AC091697.1 chr7 18297339 18297436 + miRNA NOVEL NA 98 98 1 ENSG00000225000.1 AC010082.2 chr7 18429062 18430738 - antisense NOVEL OTTHUMG00000152508.1 1677 546 2 ENSG00000222164.1 RN7SKP266 chr7 18807993 18808279 - misc_RNA KNOWN NA 287 287 1 ENSG00000226522.1 AC004744.3 chr7 18892096 18899433 - antisense NOVEL OTTHUMG00000152543.1 7338 313 3 ENSG00000232492.1 NPM1P13 chr7 18948898 18949762 - processed_pseudogene KNOWN OTTHUMG00000152542.1 865 865 1 ENSG00000122691.11 TWIST1 chr7 19020991 19117672 - protein_coding KNOWN OTTHUMG00000090821.3 96682 2033 9 ENSG00000232821.1 AC003986.6 chr7 19112474 19114271 + antisense NOVEL OTTHUMG00000152496.1 1798 1711 2 ENSG00000236536.1 AC003986.7 chr7 19119933 19121916 + antisense NOVEL OTTHUMG00000152498.1 1984 692 2 ENSG00000229533.1 AC003986.5 chr7 19144293 19146253 + antisense NOVEL OTTHUMG00000152490.1 1961 1526 2 ENSG00000146618.3 FERD3L chr7 19144782 19145421 - protein_coding KNOWN OTTHUMG00000090823.1 640 640 1 ENSG00000224466.1 CDCA4P2 chr1 86552625 86553342 - processed_pseudogene KNOWN OTTHUMG00000010262.1 718 718 1 ENSG00000223838.1 AC007091.1 chr7 19353534 19578606 + lincRNA NOVEL OTTHUMG00000152489.1 225073 566 6 ENSG00000105849.5 TWISTNB chr7 19695462 19709087 - protein_coding KNOWN OTTHUMG00000152497.1 13626 3997 6 ENSG00000265932.1 MIR3146 chr7 19705358 19705436 - miRNA KNOWN NA 79 79 1 ENSG00000173452.12 TMEM196 chr7 19719310 19773598 - protein_coding KNOWN OTTHUMG00000152504.3 54289 4087 23 ENSG00000221576.2 AC004543.1 chr7 19719388 19719451 + miRNA NOVEL NA 64 64 1 ENSG00000237921.2 AC004543.2 chr7 19813685 19818090 - lincRNA NOVEL OTTHUMG00000152511.1 4406 369 4 ENSG00000243004.4 AC005062.2 chr7 19918981 20140453 - sense_overlapping NOVEL OTTHUMG00000152535.1 221473 2564 38 ENSG00000213860.4 RPL21P75 chr7 20002765 20003247 + processed_pseudogene KNOWN OTTHUMG00000152536.1 483 483 1 ENSG00000267055.1 RP11-486P11.1 chr7 20096137 20130475 + lincRNA NOVEL OTTHUMG00000182356.1 34339 670 5 ENSG00000183742.11 MACC1 chr7 20134655 20217404 - protein_coding KNOWN OTTHUMG00000128415.5 82750 9898 23 ENSG00000236915.1 RP4-651E10.4 chr1 86571181 86693203 - antisense NOVEL OTTHUMG00000010247.1 122023 522 4 ENSG00000228598.1 MACC1-AS1 chr7 20141916 20153531 + antisense NOVEL OTTHUMG00000152534.1 11616 639 4 ENSG00000233834.5 AC005083.1 chr7 20217577 20221700 + processed_transcript NOVEL OTTHUMG00000152503.1 4124 901 11 ENSG00000226097.4 AC099342.1 chr7 20296708 20311712 + lincRNA NOVEL OTTHUMG00000152502.1 15005 1477 10 ENSG00000271133.4 CTA-293F17.1 chr7 20328299 20331747 - antisense NOVEL OTTHUMG00000185140.1 3449 896 7 ENSG00000105855.8 ITGB8 chr7 20330702 20415754 + protein_coding KNOWN OTTHUMG00000023594.5 85053 15156 42 ENSG00000200753.1 SNORD56 chr7 20377331 20377401 + snoRNA NOVEL NA 71 71 1 ENSG00000179460.5 EEF1A1P27 chr7 20582072 20583206 + processed_pseudogene KNOWN OTTHUMG00000152499.1 1135 1135 1 ENSG00000231525.1 AC002486.2 chr7 20588990 20590085 + processed_pseudogene KNOWN OTTHUMG00000152500.1 1096 590 2 ENSG00000004846.15 ABCB5 chr7 20615207 20777038 + protein_coding KNOWN OTTHUMG00000094789.6 161832 9257 72 ENSG00000223866.1 AC002486.3 chr7 20641558 20641948 - processed_pseudogene KNOWN OTTHUMG00000152588.1 391 391 1 ENSG00000221702.3 AL356270.1 chr1 86606273 86606361 - miRNA NOVEL NA 89 89 1 ENSG00000164651.15 SP8 chr7 20782283 20786886 - protein_coding KNOWN OTTHUMG00000094788.4 4604 3718 8 ENSG00000219451.3 AC005251.3 chr7 20827326 20827753 + processed_pseudogene KNOWN OTTHUMG00000152587.1 428 428 1 ENSG00000232790.2 LINC01162 chr7 20835431 21023148 + lincRNA NOVEL OTTHUMG00000152589.2 187718 447 6 ENSG00000234839.1 RPS26P30 chr7 20843627 20843961 + processed_pseudogene KNOWN OTTHUMG00000152586.1 335 335 1 ENSG00000243633.3 RN7SL542P chr7 21215537 21215830 - misc_RNA KNOWN NA 294 294 1 ENSG00000225308.2 ASS1P11 chr7 21220213 21221428 - processed_pseudogene KNOWN OTTHUMG00000152549.1 1216 1216 1 ENSG00000195024.2 RNU1-15P chr7 21381363 21381506 + snRNA KNOWN NA 144 144 1 ENSG00000229949.1 AC005094.2 chr7 21400920 21401613 - processed_pseudogene KNOWN OTTHUMG00000152550.2 694 368 2 ENSG00000266862.1 AC004595.1 chr7 21422269 21422368 - miRNA NOVEL NA 100 100 1 ENSG00000105866.12 SP4 chr7 21428034 21514822 + protein_coding KNOWN OTTHUMG00000094801.4 86789 6234 15 ENSG00000153923.9 CLCA3P chr1 86634273 86655376 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000010258.3 21104 3437 44 ENSG00000221783.1 MIR1183 chr7 21471058 21471146 + miRNA KNOWN NA 89 89 1 ENSG00000105877.16 DNAH11 chr7 21543215 21901839 + protein_coding KNOWN OTTHUMG00000152524.7 358625 15998 277 ENSG00000164649.18 CDCA7L chr7 21900900 21946084 - protein_coding KNOWN OTTHUMG00000128429.6 45185 4074 56 ENSG00000136237.17 RAPGEF5 chr7 22118238 22357144 - protein_coding KNOWN OTTHUMG00000152525.7 238907 10245 106 ENSG00000251993.1 RNA5SP227 chr7 22298594 22298706 + rRNA KNOWN NA 113 113 1 ENSG00000263927.1 AC099759.1 chr7 22380004 22380101 + miRNA NOVEL NA 98 98 1 ENSG00000105889.13 STEAP1B chr7 22419444 22632925 - protein_coding KNOWN OTTHUMG00000152529.3 213482 2316 23 ENSG00000233476.3 EEF1A1P6 chr7 22510616 22511999 - processed_pseudogene KNOWN OTTHUMG00000152528.1 1384 1384 1 ENSG00000232759.1 AC002480.3 chr7 22563337 22573996 + antisense NOVEL OTTHUMG00000152530.1 10660 2432 4 ENSG00000225541.1 AC002480.5 chr7 22571607 22661792 - sense_overlapping NOVEL OTTHUMG00000152532.1 90186 1282 2 ENSG00000261737.1 RP4-612B15.3 chr1 86703502 86704462 - antisense NOVEL OTTHUMG00000175864.1 961 961 1 ENSG00000232949.1 AC002480.4 chr7 22589705 22591622 + antisense NOVEL OTTHUMG00000152531.1 1918 557 2 ENSG00000238033.1 AC002480.2 chr7 22649960 22665533 - lincRNA NOVEL OTTHUMG00000150712.1 15574 2592 5 ENSG00000179428.2 AC073072.5 chr7 22725395 22727620 - antisense NOVEL OTTHUMG00000152547.1 2226 1364 2 ENSG00000136244.10 IL6 chr7 22725884 22732002 + protein_coding KNOWN OTTHUMG00000023178.4 6119 2069 37 ENSG00000228803.1 AC073072.6 chr7 22747675 22748804 - processed_pseudogene KNOWN OTTHUMG00000152545.1 1130 1130 1 ENSG00000234513.1 AC073072.7 chr7 22773646 22773993 - processed_pseudogene KNOWN OTTHUMG00000152546.1 348 348 1 ENSG00000281889.1 AC073072.1 chr7 22798447 22798979 + protein_coding NOVEL NA 533 123 3 ENSG00000196683.9 TOMM7 chr7 22812628 22822852 - protein_coding KNOWN OTTHUMG00000094805.3 10225 1751 19 ENSG00000228649.7 AC005682.5 chr7 22854178 22861579 + processed_transcript NOVEL OTTHUMG00000152563.5 7402 2627 9 ENSG00000221740.1 SNORD93 chr7 22856613 22856686 + snoRNA KNOWN NA 74 74 1 ENSG00000227169.2 RP1-37J18.1 chr1 4551735 4552145 - lincRNA NOVEL OTTHUMG00000000646.2 411 356 2 ENSG00000097033.13 SH3GLB1 chr1 86704570 86748184 + protein_coding KNOWN OTTHUMG00000010257.2 43615 6881 41 ENSG00000226329.2 AC005682.6 chr7 22863874 22881350 - unprocessed_pseudogene KNOWN OTTHUMG00000152564.1 17477 1467 10 ENSG00000226279.2 AC005682.7 chr7 22881893 22882390 + processed_pseudogene KNOWN OTTHUMG00000152581.1 498 498 1 ENSG00000122591.10 FAM126A chr7 22889371 23014130 - protein_coding KNOWN OTTHUMG00000128435.3 124760 14499 58 ENSG00000230658.1 KLHL7-AS1 chr7 23101228 23105703 - lincRNA NOVEL OTTHUMG00000152580.1 4476 2564 3 ENSG00000122550.16 KLHL7 chr7 23105758 23177914 + protein_coding KNOWN OTTHUMG00000094813.9 72157 7066 71 ENSG00000230042.1 AK3P3 chr7 23129178 23129841 + processed_pseudogene KNOWN OTTHUMG00000152600.1 664 664 1 ENSG00000136243.15 NUPL2 chr7 23181827 23201011 + protein_coding KNOWN OTTHUMG00000096955.4 19185 4366 61 ENSG00000226816.2 AC005082.12 chr7 23206013 23208045 + lincRNA NOVEL OTTHUMG00000152653.2 2033 2033 1 ENSG00000136235.14 GPNMB chr7 23235967 23275108 + protein_coding KNOWN OTTHUMG00000022811.5 39142 5956 64 ENSG00000280508.1 AC005082.1 chr7 23298419 23298506 + miRNA NOVEL NA 88 88 1 ENSG00000230721.1 RP4-612B15.2 chr1 86784913 86785467 + processed_pseudogene KNOWN OTTHUMG00000010259.1 555 555 1 ENSG00000156928.4 MALSU1 chr7 23298739 23311729 + protein_coding KNOWN OTTHUMG00000128443.2 12991 3851 13 ENSG00000136231.12 IGF2BP3 chr7 23310209 23470467 - protein_coding KNOWN OTTHUMG00000128445.6 160259 8511 112 ENSG00000232627.1 AC021876.4 chr7 23365618 23365976 + processed_pseudogene KNOWN OTTHUMG00000152680.1 359 359 1 ENSG00000212264.1 SNORD65 chr7 23396446 23396516 + snoRNA NOVEL NA 71 71 1 ENSG00000252590.1 RNU7-143P chr7 23450658 23450722 + snRNA KNOWN NA 65 65 1 ENSG00000236654.2 AC079780.3 chr7 23480753 23480959 + processed_pseudogene KNOWN OTTHUMG00000152682.1 207 207 1 ENSG00000281884.1 Metazoa_SRP chr7 23489553 23489827 - misc_RNA NOVEL NA 275 275 1 ENSG00000232818.2 RPS2P32 chr7 23490473 23491364 + processed_pseudogene KNOWN OTTHUMG00000152681.1 892 892 1 ENSG00000200847.1 Y_RNA chr7 23491792 23491893 - misc_RNA NOVEL NA 102 102 1 ENSG00000164548.9 TRA2A chr7 23504780 23532041 - protein_coding KNOWN OTTHUMG00000128459.3 27262 3516 65 ENSG00000183291.14 SEP15 chr1 86862445 86914424 - protein_coding KNOWN OTTHUMG00000008520.5 51980 2103 39 ENSG00000224785.1 AC006026.9 chr7 23562459 23564261 - processed_pseudogene KNOWN OTTHUMG00000152683.1 1803 1803 1 ENSG00000232553.3 AC006026.10 chr7 23585062 23586355 - processed_pseudogene KNOWN OTTHUMG00000152684.2 1294 1294 1 ENSG00000169193.10 CCDC126 chr7 23597379 23644708 + protein_coding KNOWN OTTHUMG00000128461.5 47330 3550 28 ENSG00000227436.1 FCF1P1 chr7 23619333 23622826 + processed_pseudogene KNOWN OTTHUMG00000152690.1 3494 571 2 ENSG00000279448.1 FKSG54 chr7 23638162 23638536 - protein_coding KNOWN NA 375 375 1 ENSG00000228953.1 AC006026.12 chr7 23655682 23655861 + processed_pseudogene KNOWN OTTHUMG00000152692.1 180 180 1 ENSG00000223275.1 AC006026.1 chr7 23669277 23669354 - miRNA NOVEL NA 78 78 1 ENSG00000188732.9 FAM221A chr7 23680130 23703249 + protein_coding KNOWN OTTHUMG00000128463.3 23120 7458 48 ENSG00000234286.1 AC006026.13 chr7 23680195 23680786 - antisense NOVEL OTTHUMG00000152691.1 592 143 2 ENSG00000196335.11 STK31 chr7 23710167 23832513 + protein_coding KNOWN OTTHUMG00000023053.8 122347 6183 155 ENSG00000153936.15 HS2ST1 chr1 86914648 87109998 + protein_coding KNOWN OTTHUMG00000010255.3 195351 7429 17 ENSG00000234800.2 PCMTD1P3 chr7 23721311 23721782 - processed_pseudogene KNOWN OTTHUMG00000152551.1 472 472 1 ENSG00000231328.1 TPT1P7 chr7 23811144 23811660 - processed_pseudogene KNOWN OTTHUMG00000152552.2 517 517 1 ENSG00000227930.1 AC009508.1 chr7 23891704 23897335 - lincRNA NOVEL OTTHUMG00000152555.1 5632 499 2 ENSG00000252041.1 RNA5SP228 chr7 24132705 24132837 + rRNA KNOWN NA 133 133 1 ENSG00000228944.1 AC004485.3 chr7 24196662 24255719 - antisense NOVEL OTTHUMG00000152567.1 59058 527 2 ENSG00000122585.6 NPY chr7 24284163 24291865 + protein_coding KNOWN OTTHUMG00000022973.4 7703 921 12 ENSG00000281037.1 AC002530.1 chr7 24396702 24396769 - miRNA NOVEL NA 68 68 1 ENSG00000206877.1 RNU6-1103P chr7 24537332 24537438 + snRNA KNOWN NA 107 107 1 ENSG00000105926.14 MPP6 chr7 24573268 24694193 + protein_coding KNOWN OTTHUMG00000023507.10 120926 9369 66 ENSG00000271096.1 SUMO2P14 chr7 24589115 24589407 - processed_pseudogene KNOWN OTTHUMG00000184657.1 293 293 1 ENSG00000267734.1 RP4-604K5.3 chr1 86932199 86934891 - lincRNA NOVEL OTTHUMG00000181763.1 2693 746 2 ENSG00000271330.1 CTA-298G8.2 chr7 24674309 24674612 - processed_pseudogene KNOWN OTTHUMG00000184658.1 304 304 1 ENSG00000105928.12 DFNA5 chr7 24698353 24758113 - protein_coding KNOWN OTTHUMG00000023237.5 59761 8897 72 ENSG00000070882.11 OSBPL3 chr7 24796539 24981634 - protein_coding KNOWN OTTHUMG00000023277.6 185096 8100 189 ENSG00000238976.1 AC004016.1 chr7 24900812 24900905 + miRNA NOVEL NA 94 94 1 ENSG00000234999.1 SNRPCP19 chr7 24906135 24906594 - processed_pseudogene KNOWN OTTHUMG00000152583.1 460 460 1 ENSG00000172115.7 CYCS chr7 25120091 25125361 - protein_coding KNOWN OTTHUMG00000128495.2 5271 4457 14 ENSG00000153790.10 C7orf31 chr7 25134697 25180356 - protein_coding KNOWN OTTHUMG00000128497.2 45660 3837 33 ENSG00000234406.1 AC004129.7 chr7 25185623 25188724 + processed_pseudogene KNOWN OTTHUMG00000152598.1 3102 287 3 ENSG00000213798.3 AC004129.9 chr7 25212170 25212965 - processed_pseudogene KNOWN OTTHUMG00000152595.2 796 796 1 ENSG00000105954.2 NPVF chr7 25224570 25228486 - protein_coding KNOWN OTTHUMG00000128509.2 3917 1190 3 ENSG00000224198.1 RP4-604K5.2 chr1 86943685 86944742 - antisense NOVEL OTTHUMG00000010261.1 1058 233 2 ENSG00000202233.2 U3 chr7 25264656 25264882 + snoRNA NOVEL NA 227 227 1 ENSG00000234922.1 TSEN15P3 chr7 25265924 25266290 - processed_pseudogene KNOWN OTTHUMG00000152597.1 367 367 1 ENSG00000233824.1 AC003985.1 chr7 25321302 25326815 - lincRNA NOVEL OTTHUMG00000152596.1 5514 362 3 ENSG00000260951.1 RP5-978I12.1 chr7 25358240 25359908 - lincRNA NOVEL OTTHUMG00000173196.1 1669 1669 1 ENSG00000227386.1 AC091705.1 chr7 25547762 25551062 - lincRNA NOVEL OTTHUMG00000152593.1 3301 209 2 ENSG00000222101.1 AC091705.2 chr7 25570668 25570758 + miRNA NOVEL NA 91 91 1 ENSG00000223561.5 AC003090.1 chr7 25593351 25750994 - lincRNA NOVEL OTTHUMG00000152594.1 157644 2968 11 ENSG00000239622.1 CTA-242H14.1 chr7 25689580 25689959 - processed_pseudogene KNOWN OTTHUMG00000157986.1 380 380 1 ENSG00000270933.1 CTD-2227E11.1 chr7 25948657 25949403 - lincRNA NOVEL OTTHUMG00000185220.1 747 747 1 ENSG00000199085.2 MIR148A chr7 25949903 25950013 - miRNA KNOWN NA 111 111 1 ENSG00000280842.1 AL121989.1 chr1 86952923 86953016 + miRNA NOVEL NA 94 94 1 ENSG00000266430.1 AC004520.1 chr7 26060339 26060438 + miRNA NOVEL NA 100 100 1 ENSG00000050344.8 NFE2L3 chr7 26152240 26187125 + protein_coding KNOWN OTTHUMG00000023882.4 34886 4249 7 ENSG00000273237.1 CTB-119C2.1 chr7 26173533 26174945 - antisense NOVEL OTTHUMG00000186184.1 1413 1413 1 ENSG00000122566.19 HNRNPA2B1 chr7 26189927 26201529 - protein_coding KNOWN OTTHUMG00000023471.3 11603 7541 72 ENSG00000122565.17 CBX3 chr7 26201162 26213356 + protein_coding KNOWN OTTHUMG00000022911.4 12195 4641 34 ENSG00000232383.1 AC010677.5 chr7 26276195 26276606 + processed_pseudogene KNOWN OTTHUMG00000152802.1 412 412 1 ENSG00000086300.14 SNX10 chr7 26291895 26374329 + protein_coding KNOWN OTTHUMG00000023650.4 82435 3518 53 ENSG00000225792.1 AC004540.4 chr7 26372144 26376701 - antisense NOVEL OTTHUMG00000152805.2 4558 882 4 ENSG00000214870.7 AC004540.5 chr7 26398593 26494256 + lincRNA NOVEL OTTHUMG00000152806.2 95664 1702 13 ENSG00000122548.5 KIAA0087 chr7 26533121 26538788 - lincRNA KNOWN OTTHUMG00000023321.2 5668 4283 2 ENSG00000267561.2 RP5-1052I5.2 chr1 86993009 87169204 + protein_coding PUTATIVE OTTHUMG00000181764.2 176196 2013 8 ENSG00000280255.1 RP5-1007F24.1 chr7 26538378 26541048 + TEC KNOWN OTTHUMG00000172768.2 2671 2671 1 ENSG00000233760.1 AC004947.2 chr7 26551822 26557200 + lincRNA NOVEL OTTHUMG00000152862.1 5379 2781 7 ENSG00000222004.6 C7orf71 chr7 26637871 26647305 + lincRNA KNOWN OTTHUMG00000152860.1 9435 2029 7 ENSG00000005020.11 SKAP2 chr7 26667062 26995239 - protein_coding KNOWN OTTHUMG00000023495.3 328178 5520 60 ENSG00000213787.3 RPL7AP38 chr7 26922110 26922912 + processed_pseudogene KNOWN OTTHUMG00000033538.2 803 803 1 ENSG00000226059.2 HMGB3P20 chr7 26982768 26983367 - processed_pseudogene KNOWN OTTHUMG00000033539.2 600 600 1 ENSG00000266055.1 AC004079.1 chr7 27022537 27022676 + miRNA NOVEL NA 140 140 1 ENSG00000214869.5 TPM3P4 chr7 27023737 27024907 + processed_pseudogene KNOWN OTTHUMG00000033540.4 1171 755 2 ENSG00000213786.3 NHP2P2 chr7 27048169 27048628 + processed_pseudogene KNOWN OTTHUMG00000033542.2 460 460 1 ENSG00000105991.7 HOXA1 chr7 27092993 27095996 - protein_coding KNOWN OTTHUMG00000023207.4 3004 2539 5 ENSG00000235251.2 RP11-384B12.2 chr1 87044935 87045871 - processed_pseudogene KNOWN OTTHUMG00000010250.1 937 937 1 ENSG00000233429.8 HOTAIRM1 chr7 27095647 27100265 + antisense KNOWN OTTHUMG00000158089.4 4619 1496 13 ENSG00000276528.1 HOTAIRM1_1 chr7 27096124 27096248 + misc_RNA NOVEL NA 125 125 1 ENSG00000276771.1 HOTAIRM1_2 chr7 27098900 27099114 + misc_RNA NOVEL NA 215 215 1 ENSG00000274864.1 HOTAIRM1_3 chr7 27099778 27099836 + misc_RNA NOVEL NA 59 59 1 ENSG00000274396.1 HOTAIRM1_4 chr7 27099856 27099957 + misc_RNA NOVEL NA 102 102 1 ENSG00000277694.1 HOTAIRM1_5 chr7 27099967 27100111 + misc_RNA NOVEL NA 145 145 1 ENSG00000105996.6 HOXA2 chr7 27100354 27102811 - protein_coding KNOWN OTTHUMG00000023208.6 2458 2458 3 ENSG00000105997.21 HOXA3 chr7 27106184 27152581 - protein_coding KNOWN OTTHUMG00000023209.9 46398 4306 25 ENSG00000253552.6 HOXA-AS2 chr7 27107777 27134302 + antisense KNOWN OTTHUMG00000063274.5 26526 5281 28 ENSG00000197576.12 HOXA4 chr7 27128507 27130799 - protein_coding KNOWN OTTHUMG00000023213.7 2293 1747 9 ENSG00000225568.1 RP11-384B12.3 chr1 87045875 87046700 + processed_pseudogene KNOWN OTTHUMG00000010253.1 826 826 1 ENSG00000273433.1 RP1-170O19.22 chr7 27128969 27152561 - processed_transcript NOVEL OTTHUMG00000186384.1 23593 919 3 ENSG00000254369.5 HOXA-AS3 chr7 27129977 27155928 + antisense KNOWN OTTHUMG00000158092.4 25952 5967 14 ENSG00000106004.4 HOXA5 chr7 27141052 27143668 - protein_coding KNOWN OTTHUMG00000023214.3 2617 1707 4 ENSG00000106006.6 HOXA6 chr7 27145396 27150603 - protein_coding KNOWN OTTHUMG00000023216.7 5208 1285 5 ENSG00000272801.1 RP1-170O19.23 chr7 27147366 27152598 - processed_transcript NOVEL OTTHUMG00000186385.1 5233 368 2 ENSG00000122592.7 HOXA7 chr7 27153716 27157936 - protein_coding KNOWN OTTHUMG00000023217.6 4221 2411 7 ENSG00000270182.1 RP1-170O19.24 chr7 27158344 27158976 + sense_intronic NOVEL OTTHUMG00000189080.1 633 633 1 ENSG00000078399.14 HOXA9 chr7 27162435 27175180 - protein_coding KNOWN OTTHUMG00000023220.8 12746 3029 15 ENSG00000257184.3 HOXA10-HOXA9 chr7 27163535 27180013 - protein_coding KNOWN OTTHUMG00000170193.2 16479 765 3 ENSG00000253187.2 HOXA10-AS chr7 27168619 27171915 + antisense NOVEL OTTHUMG00000158203.3 3297 1654 7 ENSG00000232596.1 RP1-37J18.2 chr1 4571548 4583421 + lincRNA NOVEL OTTHUMG00000000647.1 11874 682 5 ENSG00000267272.4 LINC01140 chr1 87129765 87169198 + lincRNA NOVEL OTTHUMG00000181765.1 39434 6717 32 ENSG00000207584.1 MIR196B chr7 27169480 27169564 - miRNA KNOWN NA 85 85 1 ENSG00000253293.4 HOXA10 chr7 27170591 27180261 - protein_coding KNOWN OTTHUMG00000023436.6 9671 3707 13 ENSG00000005073.5 HOXA11 chr7 27181510 27185223 - protein_coding KNOWN OTTHUMG00000023437.6 3714 2307 5 ENSG00000240990.8 HOXA11-AS chr7 27184518 27189293 + antisense KNOWN OTTHUMG00000158205.3 4776 2917 14 ENSG00000273961.1 HOXA11-AS1_1 chr7 27185433 27185530 + misc_RNA NOVEL NA 98 98 1 ENSG00000278334.1 HOXA11-AS1_2 chr7 27185832 27186018 + misc_RNA NOVEL NA 187 187 1 ENSG00000276496.1 HOXA11-AS1_3 chr7 27186166 27186263 + misc_RNA NOVEL NA 98 98 1 ENSG00000253508.1 RP1-170O19.14 chr7 27186573 27193448 - lincRNA NOVEL OTTHUMG00000170067.1 6876 556 2 ENSG00000277966.1 HOXA11-AS1_4 chr7 27186892 27187124 + misc_RNA NOVEL NA 233 233 1 ENSG00000278592.1 HOXA11-AS1_5 chr7 27187819 27188021 + misc_RNA NOVEL NA 203 203 1 ENSG00000221222.1 AL139139.1 chr1 87151298 87151445 + miRNA NOVEL NA 148 148 1 ENSG00000278020.1 HOXA11-AS1_6 chr7 27188816 27188994 + misc_RNA NOVEL NA 179 179 1 ENSG00000106031.7 HOXA13 chr7 27193503 27200106 - protein_coding KNOWN OTTHUMG00000023438.8 6604 5086 4 ENSG00000243766.6 HOTTIP chr7 27198575 27207259 + antisense KNOWN OTTHUMG00000063751.7 8685 5016 10 ENSG00000276609.1 HOTTIP_1 chr7 27200465 27200521 + misc_RNA NOVEL NA 57 57 1 ENSG00000278708.1 HOTTIP_2 chr7 27201844 27202219 + misc_RNA NOVEL NA 376 376 1 ENSG00000277469.1 HOTTIP_3 chr7 27202302 27202638 + misc_RNA NOVEL NA 337 337 1 ENSG00000277553.1 HOTTIP_4 chr7 27206139 27206303 + misc_RNA NOVEL NA 165 165 1 ENSG00000253308.2 RP1-170O19.17 chr7 27239243 27241228 - lincRNA NOVEL OTTHUMG00000159990.3 1986 757 2 ENSG00000253405.1 EVX1-AS chr7 27241429 27247229 - antisense NOVEL OTTHUMG00000159991.1 5801 1361 9 ENSG00000106038.11 EVX1 chr7 27242700 27250493 + protein_coding KNOWN OTTHUMG00000023093.11 7794 3353 12 ENSG00000143013.11 LMO4 chr1 87328468 87348923 + protein_coding KNOWN OTTHUMG00000010248.2 20456 5833 18 ENSG00000213783.4 RPL35P4 chr7 27269357 27269678 - processed_pseudogene KNOWN OTTHUMG00000033372.3 322 322 1 ENSG00000236569.3 HNRNPA1P73 chr7 27328607 27329534 - processed_pseudogene KNOWN OTTHUMG00000033395.4 928 928 1 ENSG00000224322.1 AC004009.3 chr7 27361843 27409938 + lincRNA NOVEL OTTHUMG00000133703.1 48096 567 5 ENSG00000279655.1 AC004009.1 chr7 27380562 27381206 + TEC KNOWN OTTHUMG00000065294.1 645 645 1 ENSG00000279429.1 AC004009.2 chr7 27412164 27412891 + TEC KNOWN OTTHUMG00000064693.1 728 728 1 ENSG00000233830.2 EIF4HP1 chr7 27458163 27458849 - processed_pseudogene KNOWN OTTHUMG00000152711.1 687 687 1 ENSG00000213781.3 PSMC1P2 chr7 27461766 27462969 + processed_pseudogene KNOWN OTTHUMG00000152713.1 1204 1204 1 ENSG00000235574.1 AC073150.6 chr7 27491682 27492765 - processed_pseudogene KNOWN OTTHUMG00000152712.1 1084 1084 1 ENSG00000106049.7 HIBADH chr7 27525442 27662995 - protein_coding KNOWN OTTHUMG00000097035.3 137554 2323 23 ENSG00000229893.2 AC004549.6 chr7 27733064 27740395 - antisense NOVEL OTTHUMG00000152710.2 7332 1190 2 ENSG00000227290.1 LINC01364 chr1 87353524 87371655 - lincRNA NOVEL OTTHUMG00000010252.1 18132 889 4 ENSG00000106052.12 TAX1BP1 chr7 27739331 27844564 + protein_coding KNOWN OTTHUMG00000023377.8 105234 9165 128 ENSG00000153814.10 JAZF1 chr7 27830573 28180743 - protein_coding KNOWN OTTHUMG00000128545.4 350171 4020 35 ENSG00000206623.1 RNU6-979P chr7 28118113 28118219 - snRNA KNOWN NA 107 107 1 ENSG00000234336.5 JAZF1-AS1 chr7 28180322 28243917 + antisense NOVEL OTTHUMG00000152771.2 63596 4092 9 ENSG00000174495.12 AC005017.2 chr7 28279211 28279700 - processed_pseudogene KNOWN OTTHUMG00000152781.1 490 490 1 ENSG00000146592.15 CREB5 chr7 28299321 28825894 + protein_coding KNOWN OTTHUMG00000097081.9 526574 11674 87 ENSG00000225286.1 AC005105.2 chr7 28615097 28615888 - processed_pseudogene KNOWN OTTHUMG00000152816.1 792 792 1 ENSG00000255690.2 TRIL chr7 28953358 28958292 - protein_coding KNOWN OTTHUMG00000152829.5 4935 4935 1 ENSG00000228421.2 AC005013.5 chr7 28957667 28959345 + lincRNA NOVEL OTTHUMG00000152794.3 1679 588 2 ENSG00000272568.4 CTB-113D17.1 chr7 28979967 29013367 + antisense NOVEL OTTHUMG00000186196.1 33401 4916 11 ENSG00000199318.1 RNA5SP52 chr1 87453240 87453373 - rRNA KNOWN NA 134 134 1 ENSG00000233517.1 AC005162.5 chr7 28987028 28988899 + antisense NOVEL OTTHUMG00000152858.1 1872 578 2 ENSG00000106066.12 CPVL chr7 28995231 29195451 - protein_coding KNOWN OTTHUMG00000023669.6 200221 3340 115 ENSG00000229452.1 AC005162.4 chr7 29080284 29082527 + antisense NOVEL OTTHUMG00000152828.1 2244 389 3 ENSG00000223052.1 AC007096.1 chr7 29088188 29088311 - miRNA NOVEL NA 124 124 1 ENSG00000106069.19 CHN2 chr7 29122274 29514328 + protein_coding KNOWN OTTHUMG00000023063.11 392055 10660 179 ENSG00000235669.1 AC004593.3 chr7 29199540 29208970 - antisense NOVEL OTTHUMG00000152748.1 9431 798 3 ENSG00000237065.2 NANOGP4 chr7 29212302 29213214 + transcribed_processed_pseudogene KNOWN OTTHUMG00000152732.2 913 913 1 ENSG00000223813.2 AC007255.8 chr7 29514225 29563670 - antisense NOVEL OTTHUMG00000152753.2 49446 1440 5 ENSG00000270196.1 RP11-550A18.1 chr7 29551521 29552151 + processed_pseudogene KNOWN OTTHUMG00000184479.1 631 631 1 ENSG00000176532.3 PRR15 chr7 29563811 29567295 + protein_coding KNOWN OTTHUMG00000128555.2 3485 1982 4 ENSG00000279778.1 RP11-60A14.1 chr1 87805286 87808372 - TEC KNOWN OTTHUMG00000175865.1 3087 3087 1 ENSG00000225264.3 ZNRF2P2 chr7 29598795 29685255 - transcribed_processed_pseudogene KNOWN OTTHUMG00000152750.1 86461 887 5 ENSG00000223437.1 TMSB4XP3 chr7 29625870 29625983 + processed_pseudogene KNOWN OTTHUMG00000152734.1 114 114 1 ENSG00000227855.3 DPY19L2P3 chr7 29650227 29742594 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000152749.3 92368 4263 23 ENSG00000212024.2 MIR550A3 chr7 29680734 29680828 - miRNA KNOWN NA 95 95 1 ENSG00000122574.9 WIPF3 chr7 29806486 29917066 + protein_coding KNOWN OTTHUMG00000152761.1 110581 6065 25 ENSG00000238906.1 snoU13 chr7 29912528 29912632 + snoRNA NOVEL NA 105 105 1 ENSG00000136193.15 SCRN1 chr7 29920103 29990289 - protein_coding KNOWN OTTHUMG00000097093.4 70187 6046 58 ENSG00000227014.4 AC007285.6 chr7 29988600 30025660 + antisense NOVEL OTTHUMG00000152760.1 37061 953 7 ENSG00000276574.1 AC007285.1 chr7 29993142 29993241 - miRNA NOVEL NA 100 100 1 ENSG00000106080.9 FKBP14 chr7 30010587 30026684 - protein_coding KNOWN OTTHUMG00000023442.3 16098 5326 14 ENSG00000224235.1 RP5-1027O11.1 chr1 87899909 87905714 - lincRNA NOVEL OTTHUMG00000037985.1 5806 787 3 ENSG00000106086.17 PLEKHA8 chr7 30027404 30130483 + protein_coding KNOWN OTTHUMG00000097751.4 103080 10572 91 ENSG00000231519.1 AC007285.7 chr7 30069658 30075115 - antisense NOVEL OTTHUMG00000152763.1 5458 518 3 ENSG00000180354.14 MTURN chr7 30134810 30162762 + protein_coding KNOWN OTTHUMG00000128559.3 27953 6532 10 ENSG00000230751.1 AC007036.4 chr7 30140870 30141417 + sense_intronic NOVEL OTTHUMG00000152764.1 548 437 2 ENSG00000251660.1 AC007036.5 chr7 30157531 30159534 + sense_overlapping NOVEL OTTHUMG00000152759.1 2004 614 2 ENSG00000225907.1 RPS27P16 chr7 30167804 30168004 + processed_pseudogene KNOWN OTTHUMG00000157133.1 201 201 1 ENSG00000227017.1 AC007036.6 chr7 30176387 30179014 - lincRNA NOVEL OTTHUMG00000152762.1 2628 674 2 ENSG00000180233.10 ZNRF2 chr7 30284307 30367692 + protein_coding KNOWN OTTHUMG00000097759.3 83386 3696 7 ENSG00000207771.1 MIR550A1 chr7 30289794 30289890 + miRNA KNOWN NA 97 97 1 ENSG00000281593.1 GS1-114I9.3 chr7 30362400 30412502 + protein_coding NOVEL OTTHUMG00000189555.1 50103 666 4 ENSG00000270507.1 CTA-21C21.1 chr1 88313153 88313302 + processed_pseudogene KNOWN OTTHUMG00000184294.1 150 150 1 ENSG00000235859.5 AC006978.6 chr7 30371508 30372741 + processed_pseudogene KNOWN OTTHUMG00000152767.1 1234 1234 1 ENSG00000281404.1 LINC01176 chr7 30390885 30412375 + lincRNA KNOWN OTTHUMG00000189554.1 21491 818 6 ENSG00000106100.9 NOD1 chr7 30424527 30478784 - protein_coding KNOWN OTTHUMG00000023923.3 54258 6820 53 ENSG00000272638.1 GS1-114I9.1 chr7 30424672 30425412 + antisense NOVEL OTTHUMG00000186204.1 741 741 1 ENSG00000006625.16 GGCT chr7 30496621 30504844 - protein_coding KNOWN OTTHUMG00000128593.3 8224 1597 28 ENSG00000281039.1 RP4-777O23.3 chr7 30497077 30550761 - protein_coding NOVEL OTTHUMG00000189706.1 53685 687 5 ENSG00000196295.10 AC005154.6 chr7 30516309 30594809 - processed_transcript NOVEL OTTHUMG00000152788.10 78501 22965 132 ENSG00000244480.1 AC005154.7 chr7 30523143 30524535 - transcribed_processed_pseudogene KNOWN OTTHUMG00000152790.2 1393 1393 1 ENSG00000264520.1 RP4-777O23.2 chr7 30525731 30533613 + lincRNA NOVEL OTTHUMG00000179702.1 7883 368 3 ENSG00000226874.1 AC005154.8 chr7 30544053 30544431 + processed_pseudogene KNOWN OTTHUMG00000152803.2 379 379 1 ENSG00000239504.3 RN7SL583P chr1 88477828 88478114 - misc_RNA KNOWN NA 287 287 1 ENSG00000263683.1 RP4-777O23.1 chr7 30550217 30551569 + lincRNA NOVEL OTTHUMG00000179701.1 1353 427 2 ENSG00000106105.12 GARS chr7 30594681 30634033 + protein_coding KNOWN OTTHUMG00000152769.1 39353 4152 58 ENSG00000106113.17 CRHR2 chr7 30651943 30700129 - protein_coding KNOWN OTTHUMG00000023218.4 48187 3984 77 ENSG00000241644.2 INMT chr7 30697985 30757602 + protein_coding KNOWN OTTHUMG00000167163.1 59618 3376 12 ENSG00000223419.1 AC006022.4 chr7 30742431 30742818 - processed_pseudogene KNOWN OTTHUMG00000152777.1 388 388 1 ENSG00000254959.5 INMT-FAM188B chr7 30752137 30892081 + protein_coding KNOWN OTTHUMG00000022897.8 139945 2880 26 ENSG00000106125.14 FAM188B chr7 30771417 30892387 + protein_coding KNOWN OTTHUMG00000152800.6 120971 7336 26 ENSG00000229263.1 AC004691.5 chr7 30796691 30803410 - antisense NOVEL OTTHUMG00000152799.1 6720 547 2 ENSG00000250424.4 RP5-877J2.1 chr7 30852273 30923812 + protein_coding PUTATIVE OTTHUMG00000162387.2 71540 1531 11 ENSG00000281634.1 AC004691.1 chr7 30876004 30876149 - miRNA NOVEL NA 146 146 1 ENSG00000230053.2 RP11-76N22.1 chr1 88498309 88498676 - processed_pseudogene KNOWN OTTHUMG00000010004.2 368 368 1 ENSG00000240583.9 AQP1 chr7 30911855 30925516 + protein_coding KNOWN OTTHUMG00000023944.4 13662 3274 21 ENSG00000106128.17 GHRHR chr7 30938669 30993254 + protein_coding KNOWN OTTHUMG00000152801.3 54586 3064 80 ENSG00000078549.13 ADCYAP1R1 chr7 31052461 31111479 + protein_coding KNOWN OTTHUMG00000023884.5 59019 6832 90 ENSG00000232887.1 AC006466.5 chr7 31119284 31119572 - processed_pseudogene KNOWN OTTHUMG00000152818.1 289 289 1 ENSG00000221751.1 AC006380.1 chr7 31316998 31317124 + miRNA NOVEL NA 127 127 1 ENSG00000271027.1 RP11-463M14.1 chr7 31330711 31330896 + processed_pseudogene KNOWN OTTHUMG00000184478.1 186 186 1 ENSG00000164600.5 NEUROD6 chr7 31337461 31340894 - protein_coding KNOWN OTTHUMG00000022865.3 3434 2131 5 ENSG00000231418.1 AC006380.3 chr7 31414645 31421286 - lincRNA NOVEL OTTHUMG00000152878.1 6642 575 4 ENSG00000180347.12 CCDC129 chr7 31514071 31658720 + protein_coding KNOWN OTTHUMG00000128611.4 144650 7246 103 ENSG00000106341.9 PPP1R17 chr7 31686715 31708455 + protein_coding KNOWN OTTHUMG00000128629.2 21741 2384 13 ENSG00000196581.9 AJAP1 chr1 4654732 4792534 + protein_coding KNOWN OTTHUMG00000000645.6 137803 12405 14 ENSG00000274321.1 uc_338 chr1 88520000 88520170 + misc_RNA NOVEL NA 171 171 1 ENSG00000154678.15 PDE1C chr7 31751179 32299329 - protein_coding KNOWN OTTHUMG00000023836.6 548151 13821 112 ENSG00000223070.1 AC006377.1 chr7 31794248 31794345 + miRNA NOVEL NA 98 98 1 ENSG00000236460.1 SNX2P2 chr7 31941261 31941583 + processed_pseudogene KNOWN OTTHUMG00000152897.1 323 323 1 ENSG00000226468.2 AC018641.7 chr7 32456963 32457758 - processed_pseudogene KNOWN OTTHUMG00000152895.1 796 796 1 ENSG00000226421.1 SLC25A5P5 chr7 32471513 32472409 + processed_pseudogene KNOWN OTTHUMG00000152896.1 897 897 1 ENSG00000106355.8 LSM5 chr7 32485332 32495283 - protein_coding KNOWN OTTHUMG00000022913.4 9952 4701 45 ENSG00000105778.16 AVL9 chr7 32495426 32588721 + protein_coding KNOWN OTTHUMG00000152929.1 93296 14751 58 ENSG00000229358.3 DPY19L1P1 chr7 32580949 32761787 - unprocessed_pseudogene KNOWN OTTHUMG00000152928.3 180839 2594 22 ENSG00000237004.3 ZNRF2P1 chr7 32728569 32729011 + processed_pseudogene KNOWN OTTHUMG00000152982.1 443 443 1 ENSG00000207573.1 MIR550A2 chr7 32732981 32733077 + miRNA KNOWN NA 97 97 1 ENSG00000237505.5 PKN2-AS1 chr1 88537513 88685204 - antisense NOVEL OTTHUMG00000010024.2 147692 3593 8 ENSG00000273014.1 RP11-225B17.2 chr7 32758882 32759353 + lincRNA NOVEL OTTHUMG00000186213.2 472 472 1 ENSG00000281332.1 LINC00997 chr7 32760279 32762924 + lincRNA KNOWN OTTHUMG00000189740.1 2646 2646 1 ENSG00000250756.1 RP11-225B17.1 chr7 32788334 32788442 + unprocessed_pseudogene KNOWN OTTHUMG00000161062.1 109 109 1 ENSG00000251999.1 SNORA31 chr7 32791814 32791946 + snoRNA NOVEL NA 133 133 1 ENSG00000231952.3 DPY19L1P2 chr7 32812757 32838570 + unprocessed_pseudogene KNOWN OTTHUMG00000152927.2 25814 915 9 ENSG00000272905.1 RP11-265E18.1 chr7 32845394 32846061 + lincRNA NOVEL OTTHUMG00000186216.1 668 668 1 ENSG00000170852.9 KBTBD2 chr7 32868172 32894131 - protein_coding KNOWN OTTHUMG00000152984.2 25960 4987 22 ENSG00000205763.12 RP9P chr7 32916815 32943176 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000097855.3 26362 1433 12 ENSG00000224573.1 AC083863.5 chr7 32951426 32951656 + processed_pseudogene KNOWN OTTHUMG00000152985.1 231 231 1 ENSG00000122642.9 FKBP9 chr7 32957404 33006931 + protein_coding KNOWN OTTHUMG00000097847.2 49528 5170 69 ENSG00000237959.1 RPL36AP10 chr1 88577880 88578201 + processed_pseudogene KNOWN OTTHUMG00000010023.1 322 322 1 ENSG00000252821.1 RNU6-388P chr7 33001950 33002054 - snRNA KNOWN NA 105 105 1 ENSG00000122643.17 NT5C3A chr7 33014114 33062797 - protein_coding KNOWN OTTHUMG00000152983.2 48684 3493 103 ENSG00000229054.1 AC074338.4 chr7 33036212 33036382 - processed_pseudogene KNOWN OTTHUMG00000152987.1 171 171 1 ENSG00000241420.3 RN7SL505P chr7 33045798 33046090 - misc_RNA KNOWN NA 293 293 1 ENSG00000164610.7 RP9 chr7 33094797 33109401 - protein_coding KNOWN OTTHUMG00000152988.1 14605 1898 17 ENSG00000228015.1 AC074338.5 chr7 33128988 33129143 - processed_pseudogene KNOWN OTTHUMG00000153034.1 156 156 1 ENSG00000122507.19 BBS9 chr7 33129244 33606068 + protein_coding KNOWN OTTHUMG00000128659.4 476825 6195 165 ENSG00000222741.1 RNA5SP229 chr7 33177740 33177838 + rRNA KNOWN NA 99 99 1 ENSG00000224946.1 AC007312.3 chr7 33276834 33277091 - processed_pseudogene KNOWN OTTHUMG00000153033.1 258 258 1 ENSG00000238090.1 AC006195.2 chr7 33379964 33380886 + processed_pseudogene KNOWN OTTHUMG00000153035.1 923 923 1 ENSG00000065243.17 PKN2 chr1 88684222 88836255 + protein_coding KNOWN OTTHUMG00000010074.3 152034 6897 76 ENSG00000173862.3 RP11-89N17.1 chr7 33725981 33728456 + lincRNA NOVEL OTTHUMG00000156245.1 2476 1058 2 ENSG00000227481.1 RP11-89N17.2 chr7 33730292 33732064 - antisense NOVEL OTTHUMG00000156242.1 1773 577 2 ENSG00000236494.1 RP11-89N17.4 chr7 33793168 33803156 - lincRNA NOVEL OTTHUMG00000156244.1 9989 2385 5 ENSG00000233219.1 RP11-89N17.3 chr7 33868501 33874231 - lincRNA NOVEL OTTHUMG00000156243.1 5731 380 3 ENSG00000164619.7 BMPER chr7 33904911 34155872 + protein_coding KNOWN OTTHUMG00000128675.3 250962 5888 41 ENSG00000236212.1 AC009262.2 chr7 34209526 34256343 + lincRNA NOVEL OTTHUMG00000153006.1 46818 510 2 ENSG00000202431.1 RNU6-438P chr7 34297496 34297598 - snRNA KNOWN NA 103 103 1 ENSG00000265985.1 AC005686.1 chr7 34312950 34313045 - miRNA NOVEL NA 96 96 1 ENSG00000197085.10 NPSR1-AS1 chr7 34346512 34871582 - processed_transcript KNOWN OTTHUMG00000153007.5 525071 7106 32 ENSG00000187258.12 NPSR1 chr7 34658239 34878332 + protein_coding KNOWN OTTHUMG00000099383.4 220094 2674 67 ENSG00000207234.1 RNU6-125P chr1 88816779 88816885 + snRNA KNOWN NA 107 107 1 ENSG00000235379.1 RPL7P31 chr7 34710757 34711480 + processed_pseudogene KNOWN OTTHUMG00000153021.1 724 724 1 ENSG00000230356.1 NCAPD2P1 chr7 34750253 34752053 - processed_pseudogene KNOWN OTTHUMG00000153020.1 1801 1801 1 ENSG00000242653.3 RN7SL132P chr7 34753424 34753719 + misc_RNA KNOWN NA 296 296 1 ENSG00000251802.1 SNORA31 chr7 34892417 34892549 + snoRNA NOVEL NA 133 133 1 ENSG00000173852.12 DPY19L1 chr7 34928876 35038271 - protein_coding KNOWN OTTHUMG00000154888.2 109396 5849 51 ENSG00000221669.1 MIR548N chr7 34940760 34940834 - miRNA KNOWN NA 75 75 1 ENSG00000189212.11 DPY19L2P1 chr7 35079989 35186041 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155026.1 106053 8272 42 ENSG00000236592.5 S100A11P2 chr7 35169224 35169535 + processed_pseudogene KNOWN OTTHUMG00000155025.1 312 312 1 ENSG00000164532.10 TBX20 chr7 35202430 35254147 - protein_coding KNOWN OTTHUMG00000099411.3 51718 1875 14 ENSG00000226063.1 AC009531.2 chr7 35258381 35259729 - lincRNA NOVEL OTTHUMG00000155027.1 1349 580 2 ENSG00000241975.1 TCEB1P19 chr1 88829102 88829419 + processed_pseudogene KNOWN OTTHUMG00000010612.1 318 318 1 ENSG00000235464.1 AC007652.1 chr7 35496021 35510263 - lincRNA NOVEL OTTHUMG00000155024.1 14243 562 2 ENSG00000122557.8 HERPUD2 chr7 35632659 35695571 - protein_coding KNOWN OTTHUMG00000128687.8 62913 3246 36 ENSG00000271122.1 RP11-379H18.1 chr7 35695214 35699413 + antisense NOVEL OTTHUMG00000185082.1 4200 4200 1 ENSG00000227544.7 AC018647.3 chr7 35715034 35734887 + lincRNA NOVEL OTTHUMG00000155058.5 19854 2849 16 ENSG00000228878.6 SEPT7-AS1 chr7 35751856 35800616 - lincRNA NOVEL OTTHUMG00000155061.3 48761 4051 15 ENSG00000232736.1 AC007551.2 chr7 35768122 35768640 - processed_pseudogene KNOWN OTTHUMG00000155060.1 519 519 1 ENSG00000122545.16 SEPT7 chr7 35800932 35907105 + protein_coding KNOWN OTTHUMG00000155063.2 106174 10295 85 ENSG00000221156.1 AC007551.1 chr7 35842889 35842973 + miRNA NOVEL NA 85 85 1 ENSG00000274328.1 RP11-239C9.1 chr7 35847038 35847426 - processed_pseudogene KNOWN OTTHUMG00000187666.1 389 389 1 ENSG00000200446.1 RNU6-1085P chr7 35930158 35930264 - snRNA KNOWN NA 107 107 1 ENSG00000137947.10 GTF2B chr1 88852932 88891944 - protein_coding KNOWN OTTHUMG00000010611.2 39013 2225 36 ENSG00000273580.1 RP11-609L3.2 chr7 35933888 35934569 + unprocessed_pseudogene KNOWN OTTHUMG00000187667.1 682 682 1 ENSG00000226102.3 SEPT7P3 chr7 35946294 35972587 + unprocessed_pseudogene KNOWN OTTHUMG00000155062.1 26294 621 6 ENSG00000270889.1 RP11-609L3.1 chr7 35971147 35971567 - processed_pseudogene KNOWN OTTHUMG00000184662.1 421 421 1 ENSG00000232930.1 AC083864.3 chr7 36029611 36055431 + lincRNA NOVEL OTTHUMG00000155064.1 25821 482 4 ENSG00000205745.2 AC083864.4 chr7 36079084 36085736 + lincRNA NOVEL OTTHUMG00000155057.2 6653 1497 2 ENSG00000261184.1 RP11-196O2.1 chr7 36095272 36100653 + sense_overlapping NOVEL OTTHUMG00000173329.1 5382 1893 4 ENSG00000228815.1 MARK2P13 chr7 36109024 36110872 - processed_pseudogene KNOWN OTTHUMG00000155059.1 1849 1849 1 ENSG00000271117.1 RP11-377H23.1 chr7 36146842 36148024 + processed_pseudogene KNOWN OTTHUMG00000184476.1 1183 1183 1 ENSG00000122547.9 EEPD1 chr7 36153149 36301543 + protein_coding KNOWN OTTHUMG00000154904.1 148395 4847 26 ENSG00000228770.1 AC007327.6 chr7 36228621 36228884 - processed_pseudogene KNOWN OTTHUMG00000154937.1 264 264 1 ENSG00000235308.1 RP11-82K18.2 chr1 88923370 88923844 + processed_pseudogene KNOWN OTTHUMG00000010615.1 475 475 1 ENSG00000229679.1 AC007327.5 chr7 36229280 36231107 - antisense NOVEL OTTHUMG00000154941.1 1828 457 2 ENSG00000234457.1 AC006960.5 chr7 36305631 36305904 + processed_pseudogene KNOWN OTTHUMG00000154942.1 274 153 2 ENSG00000260070.1 RP11-182J23.1 chr7 36319775 36320479 + antisense NOVEL OTTHUMG00000173154.1 705 705 1 ENSG00000164542.11 KIAA0895 chr7 36324221 36390125 - protein_coding KNOWN OTTHUMG00000154939.2 65905 6728 60 ENSG00000201432.1 Y_RNA chr7 36337667 36337778 - misc_RNA NOVEL NA 112 112 1 ENSG00000011426.9 ANLN chr7 36389806 36453791 + protein_coding KNOWN OTTHUMG00000023143.5 63986 6012 104 ENSG00000237400.1 AC006960.7 chr7 36463023 36504513 + antisense NOVEL OTTHUMG00000154940.1 41491 531 4 ENSG00000136250.10 AOAH chr7 36512949 36724549 - protein_coding KNOWN OTTHUMG00000023566.6 211601 3510 105 ENSG00000230539.1 AOAH-IT1 chr7 36597834 36600120 - sense_intronic NOVEL OTTHUMG00000154938.1 2287 573 3 ENSG00000274526.1 KF511026.1 chr7 36642146 36642244 - miRNA NOVEL NA 99 99 1 ENSG00000137944.15 CCBL2 chr1 88935773 88992953 - protein_coding KNOWN OTTHUMG00000010617.8 57181 2306 61 ENSG00000272984.1 RP11-85E16.1 chr7 36734004 36734535 - lincRNA NOVEL OTTHUMG00000186220.1 532 532 1 ENSG00000229424.1 AC007349.4 chr7 36750687 36763081 + lincRNA NOVEL OTTHUMG00000154946.1 12395 587 3 ENSG00000235728.1 AC007349.5 chr7 36781008 36782789 + lincRNA NOVEL OTTHUMG00000154944.1 1782 872 2 ENSG00000225739.1 NPM1P18 chr7 36818959 36819690 + processed_pseudogene KNOWN OTTHUMG00000154947.1 732 732 1 ENSG00000230831.1 AC007349.7 chr7 36838972 36841373 + antisense NOVEL OTTHUMG00000154945.1 2402 553 2 ENSG00000155849.14 ELMO1 chr7 36854361 37449249 - protein_coding KNOWN OTTHUMG00000023701.7 594889 9570 150 ENSG00000221325.1 MIR1200 chr7 36919357 36919432 - miRNA KNOWN NA 76 76 1 ENSG00000224101.1 ELMO1-AS1 chr7 36997796 37013630 + antisense NOVEL OTTHUMG00000154988.1 15835 528 3 ENSG00000221157.1 AC009196.1 chr7 37105523 37105610 - miRNA NOVEL NA 88 88 1 ENSG00000224706.1 RPS17P13 chr7 37116779 37117185 + processed_pseudogene KNOWN OTTHUMG00000154989.1 407 407 1 ENSG00000213516.8 RBMXL1 chr1 88979456 88992960 - protein_coding KNOWN OTTHUMG00000010661.3 13505 5087 8 ENSG00000222869.1 RNU6-565P chr7 37351143 37351242 + snRNA KNOWN NA 100 100 1 ENSG00000213744.3 RPS10P14 chr7 37375522 37376023 + processed_pseudogene KNOWN OTTHUMG00000154987.1 502 502 1 ENSG00000200113.1 SNORA51 chr7 37419628 37419767 + snoRNA NOVEL NA 140 140 1 ENSG00000201566.1 Y_RNA chr7 37435115 37435216 + misc_RNA NOVEL NA 102 102 1 ENSG00000178503.6 NECAP1P1 chr7 37585500 37586329 - processed_pseudogene KNOWN OTTHUMG00000154990.1 830 830 1 ENSG00000187037.7 GPR141 chr7 37683796 37833788 + protein_coding KNOWN OTTHUMG00000102105.2 149993 2312 17 ENSG00000086289.10 EPDR1 chr7 37683843 37951941 + protein_coding KNOWN OTTHUMG00000102187.4 268099 2864 12 ENSG00000225314.1 AC018634.9 chr7 37821210 37821610 + processed_pseudogene KNOWN OTTHUMG00000155020.2 401 401 1 ENSG00000086288.10 NME8 chr7 37848597 37900401 + protein_coding KNOWN OTTHUMG00000023716.4 51805 2439 54 ENSG00000106483.10 SFRP4 chr7 37905932 38025695 - protein_coding KNOWN OTTHUMG00000023026.6 119764 3606 14 ENSG00000275135.1 FO538757.1 chr1 200880 201017 + miRNA NOVEL NA 138 138 1 ENSG00000277731.1 AL137795.1 chr1 4892068 4892162 - miRNA NOVEL NA 95 95 1 ENSG00000117226.10 GBP3 chr1 89006666 89022894 - protein_coding KNOWN OTTHUMG00000010616.7 16229 4297 73 ENSG00000010270.12 STARD3NL chr7 38178222 38230671 + protein_coding KNOWN OTTHUMG00000023659.10 52450 4348 56 ENSG00000227191.5 TRGC2 chr7 38239580 38368091 - TR_C_gene KNOWN OTTHUMG00000155215.2 128512 2357 20 ENSG00000211687.1 TRGJ2 chr7 38253380 38253429 - TR_J_gene KNOWN OTTHUMG00000155217.2 50 50 1 ENSG00000211688.1 TRGJP2 chr7 38256337 38256396 - TR_J_gene KNOWN OTTHUMG00000155222.2 60 60 1 ENSG00000211689.5 TRGC1 chr7 38257879 38330821 - TR_C_gene KNOWN OTTHUMG00000155219.3 72943 3815 27 ENSG00000211690.1 TRGJ1 chr7 38269491 38269540 - TR_J_gene KNOWN OTTHUMG00000155214.1 50 50 1 ENSG00000211691.2 TRGJP chr7 38273587 38273647 - TR_J_gene KNOWN OTTHUMG00000155220.1 61 61 1 ENSG00000211692.1 TRGJP1 chr7 38276259 38276318 - TR_J_gene KNOWN OTTHUMG00000155226.1 60 60 1 ENSG00000211693.2 TRGV11 chr7 38291616 38292078 - TR_V_gene KNOWN OTTHUMG00000155221.2 463 463 1 ENSG00000231202.1 TRGVB chr7 38295763 38296233 - TR_V_pseudogene KNOWN OTTHUMG00000155216.2 471 471 1 ENSG00000202385.1 Y_RNA chr1 89020246 89020365 - misc_RNA NOVEL NA 120 120 1 ENSG00000211694.2 TRGV10 chr7 38299811 38300322 - TR_V_gene KNOWN OTTHUMG00000155223.4 512 512 1 ENSG00000231916.1 AC006033.22 chr7 38311383 38311808 + processed_pseudogene KNOWN OTTHUMG00000155225.1 426 426 1 ENSG00000211695.2 TRGV9 chr7 38317017 38318861 - TR_V_gene KNOWN OTTHUMG00000155218.3 1845 1735 2 ENSG00000225992.1 TRGVA chr7 38322446 38322730 - TR_V_pseudogene KNOWN OTTHUMG00000155224.1 285 285 1 ENSG00000272908.1 RP11-121A8.1 chr7 38326070 38329643 - lincRNA NOVEL OTTHUMG00000186227.1 3574 1968 2 ENSG00000211696.2 TRGV8 chr7 38330343 38330935 - TR_V_gene KNOWN OTTHUMG00000155098.4 593 468 2 ENSG00000249978.1 TRGV7 chr7 38335041 38335514 - TR_V_pseudogene KNOWN OTTHUMG00000155100.3 474 353 2 ENSG00000226212.2 TRGV6 chr7 38340700 38340998 - TR_V_pseudogene KNOWN OTTHUMG00000155096.3 299 299 1 ENSG00000281103.1 TRG-AS1 chr7 38341577 38378804 + antisense KNOWN OTTHUMG00000189585.1 37228 4130 6 ENSG00000211697.3 TRGV5 chr7 38343894 38350022 - TR_V_gene KNOWN OTTHUMG00000155101.4 6129 2244 5 ENSG00000117228.9 GBP1 chr1 89052319 89065360 - protein_coding KNOWN OTTHUMG00000010614.3 13042 4992 27 ENSG00000228668.1 TRGV5P chr7 38345030 38345499 - TR_V_pseudogene KNOWN OTTHUMG00000155095.3 470 354 2 ENSG00000211698.2 TRGV4 chr7 38353715 38354517 - TR_V_gene KNOWN OTTHUMG00000155099.4 803 688 2 ENSG00000211699.2 TRGV3 chr7 38358512 38359162 - TR_V_gene KNOWN OTTHUMG00000155102.3 651 537 2 ENSG00000233306.2 TRGV2 chr7 38362864 38363518 - TR_V_gene KNOWN OTTHUMG00000155105.4 655 544 2 ENSG00000211701.2 TRGV1 chr7 38367586 38368169 - TR_V_gene KNOWN OTTHUMG00000155097.4 584 465 2 ENSG00000078053.15 AMPH chr7 38383704 38631567 - protein_coding KNOWN OTTHUMG00000023725.4 247864 5636 80 ENSG00000241756.3 RN7SL83P chr7 38531042 38531338 - misc_RNA KNOWN NA 297 297 1 ENSG00000227404.1 KRT8P20 chr7 38655205 38656613 + processed_pseudogene KNOWN OTTHUMG00000155103.1 1409 1409 1 ENSG00000281438.1 AC011309.1 chr7 38655893 38656025 - miRNA NOVEL NA 133 133 1 ENSG00000164556.7 FAM183B chr7 38685346 38687037 - protein_coding KNOWN OTTHUMG00000153653.1 1692 1595 2 ENSG00000234518.2 PTGES3P1 chr1 89104285 89104767 - processed_pseudogene KNOWN OTTHUMG00000010660.1 483 483 1 ENSG00000274278.1 AC004850.1 chr7 38704222 38704315 - miRNA NOVEL NA 94 94 1 ENSG00000006715.14 VPS41 chr7 38722963 38932394 - protein_coding KNOWN OTTHUMG00000023629.6 209432 7801 125 ENSG00000106536.18 POU6F2 chr7 38977998 39493095 + protein_coding KNOWN OTTHUMG00000150803.7 515098 8231 64 ENSG00000233854.1 POU6F2-AS2 chr7 38984243 39013551 - antisense NOVEL OTTHUMG00000155276.1 29309 514 5 ENSG00000266481.1 AC092174.1 chr7 39294307 39294406 - miRNA NOVEL NA 100 100 1 ENSG00000206947.1 SNORA20 chr7 39329003 39329134 - snoRNA NOVEL NA 132 132 1 ENSG00000224122.1 POU6F2-AS1 chr7 39404598 39406346 - antisense KNOWN OTTHUMG00000155277.1 1749 381 4 ENSG00000227172.2 AC011290.4 chr7 39545646 39566239 - antisense NOVEL OTTHUMG00000155274.2 20594 414 3 ENSG00000241127.6 YAE1D1 chr7 39566376 39610320 + protein_coding KNOWN OTTHUMG00000128689.3 43945 2569 15 ENSG00000236015.1 AC011290.5 chr7 39569376 39570198 - processed_pseudogene KNOWN OTTHUMG00000155284.1 823 823 1 ENSG00000162645.11 GBP2 chr1 89106132 89150456 - protein_coding KNOWN OTTHUMG00000010662.4 44325 6276 36 ENSG00000231951.1 AC004837.4 chr7 39609610 39610290 - antisense NOVEL OTTHUMG00000155272.1 681 565 2 ENSG00000106540.4 AC004837.3 chr7 39609717 39610280 + processed_pseudogene KNOWN OTTHUMG00000155283.1 564 564 1 ENSG00000006451.6 RALA chr7 39623483 39708124 + protein_coding KNOWN OTTHUMG00000128775.3 84642 3665 18 ENSG00000275912.1 AC004837.1 chr7 39685011 39685098 - miRNA NOVEL NA 88 88 1 ENSG00000228554.1 AC004837.5 chr7 39700341 39703296 - antisense NOVEL OTTHUMG00000155278.1 2956 731 2 ENSG00000188185.10 LINC00265 chr7 39733632 39793092 + lincRNA NOVEL OTTHUMG00000155273.1 59461 3115 16 ENSG00000252480.1 RNU6-719P chr7 39768341 39768444 + snRNA KNOWN NA 104 104 1 ENSG00000270797.1 RP5-1173I20.1 chr7 39788967 39789304 - processed_pseudogene KNOWN OTTHUMG00000184664.1 338 338 1 ENSG00000226220.1 CICP22 chr7 39796593 39797911 - processed_pseudogene KNOWN OTTHUMG00000155281.1 1319 1319 1 ENSG00000237251.2 AC072061.2 chr7 39816549 39868140 + unprocessed_pseudogene KNOWN OTTHUMG00000155279.1 51592 771 5 ENSG00000213512.1 GBP7 chr1 89131751 89176040 - protein_coding KNOWN OTTHUMG00000010659.1 44290 2454 11 ENSG00000231198.1 AC004987.10 chr7 39833286 39833793 - processed_pseudogene KNOWN OTTHUMG00000155319.1 508 508 1 ENSG00000233225.3 AC004987.9 chr7 39833571 39834718 + processed_pseudogene KNOWN OTTHUMG00000155275.1 1148 1148 1 ENSG00000175741.5 RWDD4P2 chr7 39854494 39855056 - processed_pseudogene KNOWN OTTHUMG00000155282.1 563 563 1 ENSG00000242855.3 RN7SL496P chr7 39888375 39888664 + misc_RNA KNOWN NA 290 290 1 ENSG00000259826.1 RP11-467D6.1 chr7 39947522 39949755 - antisense NOVEL OTTHUMG00000173374.1 2234 2234 1 ENSG00000065883.13 CDK13 chr7 39950037 40097134 + protein_coding KNOWN OTTHUMG00000023726.3 147098 8921 66 ENSG00000273444.1 RP5-1147A1.2 chr7 40107288 40107454 + unprocessed_pseudogene KNOWN OTTHUMG00000186237.1 167 167 1 ENSG00000270577.1 RP5-1147A1.1 chr7 40115685 40115943 + processed_pseudogene KNOWN OTTHUMG00000184474.1 259 259 1 ENSG00000168303.6 MPLKIP chr7 40126023 40134659 - protein_coding KNOWN OTTHUMG00000128797.3 8637 7668 2 ENSG00000199273.1 Y_RNA chr7 40128121 40128232 - misc_RNA NOVEL NA 112 112 1 ENSG00000162654.8 GBP4 chr1 89181148 89198932 - protein_coding KNOWN OTTHUMG00000010663.1 17785 6127 16 ENSG00000175600.14 SUGCT chr7 40134977 40860763 + protein_coding KNOWN OTTHUMG00000155094.6 725787 2857 74 ENSG00000248711.1 THUMPD3P1 chr7 40151613 40154151 + unprocessed_pseudogene KNOWN OTTHUMG00000155106.1 2539 1480 3 ENSG00000203446.2 AC004988.1 chr7 40538127 40546928 - antisense NOVEL OTTHUMG00000155092.1 8802 1771 2 ENSG00000227658.1 AC005160.3 chr7 40775558 40785217 + sense_intronic NOVEL OTTHUMG00000155093.1 9660 381 4 ENSG00000232458.1 LINC01450 chr7 40964667 40979939 - lincRNA NOVEL OTTHUMG00000155113.1 15273 3263 3 ENSG00000224017.1 LINC01449 chr7 41101604 41133507 + lincRNA NOVEL OTTHUMG00000155115.1 31904 1220 6 ENSG00000236310.1 AC005027.3 chr7 41667168 41705335 - sense_overlapping NOVEL OTTHUMG00000155112.1 38168 386 3 ENSG00000122641.9 INHBA chr7 41685114 41703108 - protein_coding KNOWN OTTHUMG00000023574.3 17995 7532 7 ENSG00000224116.5 INHBA-AS1 chr7 41693916 41779388 + antisense NOVEL OTTHUMG00000155114.2 85473 5417 9 ENSG00000106571.11 GLI3 chr7 41960950 42237870 - protein_coding KNOWN OTTHUMG00000023630.4 276921 9239 41 ENSG00000154451.13 GBP5 chr1 89258950 89272804 - protein_coding KNOWN OTTHUMG00000010006.2 13855 8143 28 ENSG00000213721.3 HMGN2P30 chr7 42113365 42113620 + processed_pseudogene KNOWN OTTHUMG00000155127.1 256 256 1 ENSG00000276614.1 AC005158.1 chr7 42218409 42218514 - miRNA NOVEL NA 106 106 1 ENSG00000238284.1 LINC01448 chr7 42661726 42706447 - lincRNA NOVEL OTTHUMG00000155126.1 44722 1171 3 ENSG00000229161.2 TCP1P1 chr7 42794906 42802494 + unprocessed_pseudogene KNOWN OTTHUMG00000155181.1 7589 1610 3 ENSG00000231539.1 AC010132.10 chr7 42829672 42844438 - lincRNA NOVEL OTTHUMG00000155178.1 14767 561 2 ENSG00000261019.1 RP11-111K18.2 chr7 42901272 42902639 - lincRNA NOVEL OTTHUMG00000172765.1 1368 1368 1 ENSG00000136197.11 C7orf25 chr7 42908726 42912305 - protein_coding KNOWN OTTHUMG00000128869.3 3580 3248 12 ENSG00000256646.6 PSMA2 chr7 42909273 42932174 - protein_coding NOVEL OTTHUMG00000168259.1 22902 3068 16 ENSG00000106588.9 PSMA2 chr7 42916857 42932223 - protein_coding KNOWN OTTHUMG00000023916.4 15367 5336 34 ENSG00000234983.1 AC010132.11 chr7 42918741 42920084 + processed_pseudogene KNOWN OTTHUMG00000155179.1 1344 1043 2 ENSG00000237568.1 RP4-620F22.2 chr1 89260582 89269754 + antisense NOVEL OTTHUMG00000010124.1 9173 324 2 ENSG00000106591.3 MRPL32 chr7 42932200 42948958 + protein_coding KNOWN OTTHUMG00000155180.1 16759 3534 11 ENSG00000232006.7 AC005537.2 chr7 42954135 43113931 - lincRNA NOVEL OTTHUMG00000155182.6 159797 4520 40 ENSG00000201933.1 Y_RNA chr7 43096732 43096844 + misc_RNA NOVEL NA 113 113 1 ENSG00000002746.13 HECW1 chr7 43112599 43566001 + protein_coding KNOWN OTTHUMG00000128917.4 453403 13965 87 ENSG00000181211.1 HECW1-IT1 chr7 43117896 43163187 + sense_intronic NOVEL OTTHUMG00000155204.1 45292 1839 7 ENSG00000264069.2 MIR3943 chr7 43150897 43151009 + miRNA KNOWN NA 113 113 1 ENSG00000252983.1 RNU7-35P chr7 43194421 43194482 + snRNA KNOWN NA 62 62 1 ENSG00000223258.1 RNU6-575P chr7 43207762 43207866 - snRNA KNOWN NA 105 105 1 ENSG00000228680.1 AC004692.4 chr7 43239066 43249268 - antisense NOVEL OTTHUMG00000155205.1 10203 1205 7 ENSG00000213717.3 AC004692.5 chr7 43274159 43274582 + processed_pseudogene KNOWN OTTHUMG00000155207.2 424 424 1 ENSG00000238081.1 RP4-620F22.3 chr1 89289676 89290337 - processed_pseudogene KNOWN OTTHUMG00000010126.1 662 662 1 ENSG00000231638.1 AC011738.4 chr7 43508728 43522542 - antisense NOVEL OTTHUMG00000155206.1 13815 2916 3 ENSG00000252308.1 AC011738.1 chr7 43578888 43578972 + miRNA NOVEL NA 85 85 1 ENSG00000164543.5 STK17A chr7 43582758 43626786 + protein_coding KNOWN OTTHUMG00000022825.3 44029 4943 13 ENSG00000106603.16 COA1 chr7 43608456 43729717 - protein_coding KNOWN OTTHUMG00000128949.10 121262 11820 94 ENSG00000106605.9 BLVRA chr7 43758680 43807342 + protein_coding KNOWN OTTHUMG00000128953.4 48663 1821 27 ENSG00000229497.1 AC005189.6 chr7 43767290 43767599 + processed_pseudogene KNOWN OTTHUMG00000155246.2 310 310 1 ENSG00000062582.12 MRPS24 chr7 43866558 43869893 - protein_coding KNOWN OTTHUMG00000023175.3 3336 2613 15 ENSG00000270617.1 URGCP-MRPS24 chr7 43866558 43906589 - protein_coding PUTATIVE OTTHUMG00000185136.1 40032 795 7 ENSG00000106608.15 URGCP chr7 43875894 43926411 - protein_coding KNOWN OTTHUMG00000155245.1 50518 7830 58 ENSG00000237972.1 TUBG1P chr7 43918697 43920054 + processed_pseudogene KNOWN OTTHUMG00000155247.1 1358 1358 1 ENSG00000231510.1 RP11-542C10.1 chr1 5086459 5090899 - lincRNA PUTATIVE OTTHUMG00000041729.1 4441 449 4 ENSG00000233235.1 RP5-908D6.1 chr1 89324522 89334880 + unprocessed_pseudogene KNOWN OTTHUMG00000010127.1 10359 797 4 ENSG00000078967.11 UBE2D4 chr7 43926438 43956136 + protein_coding KNOWN OTTHUMG00000128971.5 29699 4713 63 ENSG00000214783.8 POLR2J4 chr7 43940895 44019175 - processed_transcript NOVEL OTTHUMG00000186388.2 78281 6492 25 ENSG00000273432.1 RP5-1165K10.2 chr7 43951910 44019151 - processed_transcript NOVEL OTTHUMG00000186450.1 67242 2076 9 ENSG00000241057.1 AC004985.12 chr7 43961590 43973325 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155270.1 11736 1170 7 ENSG00000239556.2 AC004951.5 chr7 43984994 43990207 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155269.2 5214 790 6 ENSG00000136206.3 SPDYE1 chr7 44000889 44010122 + protein_coding KNOWN OTTHUMG00000128985.1 9234 2649 7 ENSG00000228434.1 AC004951.6 chr7 44004046 44007866 - lincRNA NOVEL OTTHUMG00000155268.1 3821 1866 3 ENSG00000272655.1 POLR2J4 chr7 44013562 44019170 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155253.3 5609 1424 6 ENSG00000228903.5 RASA4CP chr7 44026951 44041892 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155354.1 14942 4057 21 ENSG00000235314.1 LINC00957 chr7 44039171 44042306 + lincRNA NOVEL OTTHUMG00000155351.1 3136 2703 4 ENSG00000183347.14 GBP6 chr1 89364058 89386461 + protein_coding KNOWN OTTHUMG00000010123.1 22404 2987 11 ENSG00000136279.17 DBNL chr7 44044640 44069456 + protein_coding KNOWN OTTHUMG00000155350.5 24817 12587 206 ENSG00000274083.1 MIR6837 chr7 44051766 44051829 + miRNA KNOWN NA 64 64 1 ENSG00000164708.5 PGAM2 chr7 44062727 44065587 - protein_coding KNOWN OTTHUMG00000155355.1 2861 857 3 ENSG00000239775.1 AC017116.11 chr7 44064908 44066079 + sense_overlapping NOVEL OTTHUMG00000155352.1 1172 708 4 ENSG00000122678.13 POLM chr7 44072247 44082540 - protein_coding KNOWN OTTHUMG00000155353.1 10294 4487 108 ENSG00000277792.1 MIR6838 chr7 44073378 44073433 - miRNA KNOWN NA 56 56 1 ENSG00000106624.7 AEBP1 chr7 44104361 44114562 + protein_coding KNOWN OTTHUMG00000023362.19 10202 4955 62 ENSG00000264652.1 MIR4649 chr7 44110849 44110912 + miRNA KNOWN NA 64 64 1 ENSG00000106628.9 POLD2 chr7 44114681 44124358 - protein_coding KNOWN OTTHUMG00000022909.14 9678 3695 93 ENSG00000252848.1 RNA5SP230 chr7 44125752 44125873 - rRNA KNOWN NA 122 122 1 ENSG00000215874.3 CAPNS1P1 chr1 89394033 89394665 + processed_pseudogene KNOWN OTTHUMG00000010125.2 633 633 1 ENSG00000106631.7 MYL7 chr7 44138864 44141332 - protein_coding KNOWN OTTHUMG00000023125.6 2469 1458 45 ENSG00000106633.14 GCK chr7 44144271 44198170 - protein_coding KNOWN OTTHUMG00000022903.4 53900 4122 61 ENSG00000106636.6 YKT6 chr7 44200968 44214294 + protein_coding KNOWN OTTHUMG00000129089.3 13327 3707 32 ENSG00000058404.18 CAMK2B chr7 44217150 44334577 - protein_coding KNOWN OTTHUMG00000023491.12 117428 8159 336 ENSG00000279853.1 RP5-844F9.1 chr7 44367140 44369292 - TEC KNOWN OTTHUMG00000173300.1 2153 2153 1 ENSG00000280507.1 AC004453.1 chr7 44367176 44367270 + miRNA NOVEL NA 95 95 1 ENSG00000015676.16 NUDCD3 chr7 44379121 44490880 - protein_coding KNOWN OTTHUMG00000129174.4 111760 10113 39 ENSG00000146677.7 AC004453.8 chr7 44467897 44468304 + processed_pseudogene KNOWN OTTHUMG00000155305.2 408 408 1 ENSG00000200456.1 RNU6-1097P chr7 44503773 44503879 - snRNA KNOWN NA 107 107 1 ENSG00000225443.1 AC004938.5 chr7 44511025 44511332 - processed_pseudogene KNOWN OTTHUMG00000155306.1 308 308 1 ENSG00000225492.5 GBP1P1 chr1 89407679 89426243 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000010128.2 18565 2352 14 ENSG00000015520.13 NPC1L1 chr7 44512535 44541315 - protein_coding KNOWN OTTHUMG00000023691.3 28781 5252 64 ENSG00000136271.9 DDX56 chr7 44565417 44575051 - protein_coding KNOWN OTTHUMG00000129211.2 9635 4068 118 ENSG00000158604.13 TMED4 chr7 44577894 44582287 - protein_coding KNOWN OTTHUMG00000129210.2 4394 3769 20 ENSG00000271586.1 RP11-52M17.1 chr7 44601032 44601487 + processed_pseudogene KNOWN OTTHUMG00000184473.1 456 456 1 ENSG00000105953.13 OGDH chr7 44606572 44709066 + protein_coding KNOWN OTTHUMG00000155304.2 102495 5210 162 ENSG00000122515.13 ZMIZ2 chr7 44748581 44769881 + protein_coding KNOWN OTTHUMG00000155817.2 21301 7339 160 ENSG00000228596.1 AC013436.6 chr7 44785050 44787340 - antisense NOVEL OTTHUMG00000155816.1 2291 422 2 ENSG00000196262.12 PPIA chr7 44796680 44824564 + protein_coding KNOWN OTTHUMG00000023687.5 27885 4432 48 ENSG00000105968.17 H2AFV chr7 44826791 44848083 - protein_coding KNOWN OTTHUMG00000129217.4 21293 4749 33 ENSG00000234183.1 AC004854.4 chr7 44848416 44849568 + antisense NOVEL OTTHUMG00000155819.1 1153 362 4 ENSG00000197147.11 LRRC8B chr1 89524836 89597864 + protein_coding KNOWN OTTHUMG00000010129.2 73029 7691 22 ENSG00000146676.6 PURB chr7 44876293 44885361 - protein_coding KNOWN OTTHUMG00000023578.3 9069 9069 1 ENSG00000264326.1 MIR4657 chr7 44881748 44881800 - miRNA KNOWN NA 53 53 1 ENSG00000272768.1 RP4-673M15.1 chr7 44884953 44886393 + antisense NOVEL OTTHUMG00000186249.1 1441 1441 1 ENSG00000281768.1 Metazoa_SRP chr7 44902790 44903074 - misc_RNA NOVEL NA 285 285 1 ENSG00000230160.1 AC004854.5 chr7 44919669 44920329 + processed_pseudogene KNOWN OTTHUMG00000155822.1 661 349 2 ENSG00000260997.1 RP4-647J21.1 chr7 44958999 44960909 - sense_overlapping NOVEL OTTHUMG00000173373.1 1911 1911 1 ENSG00000136286.13 MYO1G chr7 44962662 44979098 - protein_coding KNOWN OTTHUMG00000155821.2 16437 8653 119 ENSG00000232956.7 SNHG15 chr7 44983023 44986961 - lincRNA KNOWN OTTHUMG00000179544.2 3939 3647 37 ENSG00000277184.1 SNORA9 chr7 44985378 44985510 - snoRNA KNOWN NA 133 133 1 ENSG00000136280.14 CCM2 chr7 44999475 45076469 + protein_coding KNOWN OTTHUMG00000129246.2 76995 8196 128 ENSG00000231999.5 FLJ27354 chr1 89583241 89632894 - antisense NOVEL OTTHUMG00000010130.3 49654 2088 13 ENSG00000280981.1 Metazoa_SRP chr7 45031236 45031495 + misc_RNA NOVEL NA 260 260 1 ENSG00000136274.8 NACAD chr7 45080438 45088914 - protein_coding KNOWN OTTHUMG00000159170.2 8477 4917 10 ENSG00000136270.12 TBRG4 chr7 45100100 45112047 - protein_coding KNOWN OTTHUMG00000129247.5 11948 5803 88 ENSG00000206838.1 SNORA5A chr7 45104349 45104482 - snoRNA KNOWN NA 134 134 1 ENSG00000201772.1 SNORA5C chr7 45104906 45105042 - snoRNA KNOWN NA 137 137 1 ENSG00000200656.1 SNORA5B chr7 45105968 45106099 - snoRNA KNOWN NA 132 132 1 ENSG00000122679.7 RAMP3 chr7 45157791 45186302 + protein_coding KNOWN OTTHUMG00000023729.3 28512 1427 11 ENSG00000275295.1 RP11-111G20.3 chr7 45303620 45304362 + processed_pseudogene KNOWN OTTHUMG00000187668.2 743 637 2 ENSG00000234359.3 ELK1P1 chr7 45391626 45392205 - processed_pseudogene KNOWN OTTHUMG00000159177.1 580 580 1 ENSG00000225537.1 AC073325.1 chr7 45460712 45542182 + lincRNA NOVEL OTTHUMG00000155418.1 81471 542 3 ENSG00000230735.1 RP11-413E1.4 chr1 89629725 89676386 + sense_intronic NOVEL OTTHUMG00000040465.1 46662 437 4 ENSG00000226999.1 AC073325.2 chr7 45534523 45534681 - processed_pseudogene KNOWN OTTHUMG00000155421.2 159 159 1 ENSG00000164742.13 ADCY1 chr7 45574140 45723116 + protein_coding KNOWN OTTHUMG00000155420.2 148977 13530 41 ENSG00000214765.7 SEPT7P2 chr7 45723780 45768985 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155423.1 45206 4496 63 ENSG00000234536.1 AC096582.7 chr7 45773595 45783157 + unprocessed_pseudogene KNOWN OTTHUMG00000155422.1 9563 386 5 ENSG00000212450.1 RNU6-241P chr7 45789585 45789688 + snRNA KNOWN NA 104 104 1 ENSG00000272556.1 RP11-638I8.1 chr7 45814602 45815263 + lincRNA NOVEL OTTHUMG00000186250.1 662 662 1 ENSG00000235955.1 CICP20 chr7 45816216 45819016 - processed_pseudogene KNOWN OTTHUMG00000155427.1 2801 2801 1 ENSG00000226838.1 AC096582.8 chr7 45816557 45821064 + unprocessed_pseudogene KNOWN OTTHUMG00000155425.1 4508 349 2 ENSG00000251378.1 AC096582.9 chr7 45818582 45819097 + unprocessed_pseudogene KNOWN OTTHUMG00000155417.1 516 516 1 ENSG00000202350.1 RNU6-326P chr7 45843634 45843740 + snRNA KNOWN NA 107 107 1 ENSG00000171488.13 LRRC8C chr1 89633072 89769903 + protein_coding KNOWN OTTHUMG00000010305.5 136832 11724 13 ENSG00000146678.8 IGFBP1 chr7 45888357 45893668 + protein_coding KNOWN OTTHUMG00000152343.3 5312 1653 11 ENSG00000146674.13 IGFBP3 chr7 45912245 45921874 - protein_coding KNOWN OTTHUMG00000023769.8 9630 4571 45 ENSG00000237471.1 AC073115.6 chr7 45969657 45980191 + lincRNA NOVEL OTTHUMG00000155426.1 10535 555 3 ENSG00000229628.1 AC073115.7 chr7 45990905 46000898 + lincRNA NOVEL OTTHUMG00000155428.1 9994 532 2 ENSG00000233952.1 FTLP15 chr7 45997540 45998071 - processed_pseudogene KNOWN OTTHUMG00000154754.1 532 532 1 ENSG00000221971.3 TTC4P1 chr7 45999621 46000778 - processed_pseudogene KNOWN OTTHUMG00000154753.1 1158 1158 1 ENSG00000224547.1 ZNF619P1 chr7 46144937 46145688 + processed_pseudogene KNOWN OTTHUMG00000155473.1 752 752 1 ENSG00000229459.1 AC023669.1 chr7 46261064 46294469 + lincRNA NOVEL OTTHUMG00000155424.1 33406 524 4 ENSG00000237760.1 AC092657.2 chr7 46302120 46343621 + lincRNA NOVEL OTTHUMG00000155471.1 41502 239 2 ENSG00000240355.1 AC004869.3 chr7 46476457 46477940 - lincRNA NOVEL OTTHUMG00000155472.1 1484 229 2 ENSG00000271949.1 RP11-302M6.4 chr1 89633140 89933250 + protein_coding NOVEL OTTHUMG00000185381.1 300111 654 4 ENSG00000230680.2 AC004869.2 chr7 46477822 46481578 - lincRNA NOVEL OTTHUMG00000155475.1 3757 540 3 ENSG00000224519.1 HMGN1P19 chr7 46634614 46634946 + processed_pseudogene KNOWN OTTHUMG00000155468.1 333 333 1 ENSG00000233539.4 AC011294.3 chr7 46673785 46759851 - lincRNA NOVEL OTTHUMG00000155474.1 86067 2791 11 ENSG00000242948.1 EPS15P1 chr7 46781373 46783443 + transcribed_processed_pseudogene KNOWN OTTHUMG00000155470.1 2071 2071 2 ENSG00000232072.1 AC004901.1 chr7 46890625 47049678 - lincRNA NOVEL OTTHUMG00000155476.2 159054 661 5 ENSG00000223829.4 AC004870.4 chr7 46969702 47027481 + processed_transcript NOVEL OTTHUMG00000155553.1 57780 1537 10 ENSG00000229192.5 AC004870.3 chr7 47000620 47079128 - lincRNA NOVEL OTTHUMG00000155549.1 78509 530 8 ENSG00000242552.1 MRPL42P4 chr7 47026128 47026570 - processed_pseudogene KNOWN OTTHUMG00000155552.1 443 443 1 ENSG00000214754.3 AC004870.5 chr7 47052793 47053674 + processed_pseudogene KNOWN OTTHUMG00000155551.1 882 882 1 ENSG00000136205.15 TNS3 chr7 47275154 47582558 - protein_coding KNOWN OTTHUMG00000074075.2 307405 11797 130 ENSG00000226394.2 RP11-413E1.2 chr1 89661212 89661353 - processed_pseudogene KNOWN OTTHUMG00000010306.2 142 142 1 ENSG00000236078.1 LINC01447 chr7 47621939 47629893 + lincRNA NOVEL OTTHUMG00000155554.1 7955 2761 4 ENSG00000221845.4 C7orf65 chr7 47655244 47661648 + lincRNA KNOWN OTTHUMG00000155550.1 6405 2911 3 ENSG00000136273.10 HUS1 chr7 47695730 47979581 - protein_coding KNOWN OTTHUMG00000155645.3 283852 4177 58 ENSG00000146666.5 LINC00525 chr7 47761476 47766772 + antisense NOVEL OTTHUMG00000155644.1 5297 1188 3 ENSG00000158683.6 PKD1L1 chr7 47774652 47948491 - protein_coding KNOWN OTTHUMG00000155649.1 173840 9538 69 ENSG00000136275.9 C7orf69 chr7 47795291 47819847 + antisense KNOWN OTTHUMG00000155648.2 24557 808 7 ENSG00000225507.1 AC069282.6 chr7 47956793 47957318 + processed_pseudogene KNOWN OTTHUMG00000155643.1 526 526 1 ENSG00000164744.11 SUN3 chr7 47987148 48029119 - protein_coding KNOWN OTTHUMG00000155646.1 41972 1732 82 ENSG00000164746.12 C7orf57 chr7 48035511 48061304 + protein_coding KNOWN OTTHUMG00000155808.1 25794 2275 45 ENSG00000183696.12 UPP1 chr7 48088628 48108733 + protein_coding KNOWN OTTHUMG00000129253.2 20106 4577 80 ENSG00000260972.1 RP1-58B11.1 chr1 5492978 5494674 + lincRNA NOVEL OTTHUMG00000175733.1 1697 1697 1 ENSG00000231613.1 RP5-943J3.1 chr1 89788914 89790492 + sense_intronic NOVEL OTTHUMG00000010584.1 1579 509 2 ENSG00000179869.13 ABCA13 chr7 48171458 48647496 + protein_coding KNOWN OTTHUMG00000155840.5 476039 19074 235 ENSG00000281791.1 AC091770.1 chr7 48652669 48652814 - miRNA NOVEL NA 146 146 1 ENSG00000228173.1 AC091770.3 chr7 48660575 48663305 - lincRNA NOVEL OTTHUMG00000155841.1 2731 373 2 ENSG00000225705.2 AC004899.3 chr7 48846426 48852898 - processed_pseudogene KNOWN OTTHUMG00000155843.1 6473 1714 4 ENSG00000279578.1 RP4-815D20.1 chr7 48847766 48851625 + TEC KNOWN OTTHUMG00000187142.1 3860 3860 1 ENSG00000229165.1 GDI2P1 chr7 48902556 48903891 - processed_pseudogene KNOWN OTTHUMG00000155842.1 1336 1336 1 ENSG00000218305.3 CDC14C chr7 48919765 48926013 + processed_pseudogene KNOWN OTTHUMG00000155844.1 6249 1719 3 ENSG00000277285.1 AC096752.1 chr7 49029978 49030068 - miRNA NOVEL NA 91 91 1 ENSG00000234686.1 AC010971.1 chr7 49230137 49254816 + lincRNA NOVEL OTTHUMG00000155853.1 24680 692 4 ENSG00000270763.1 DDX43P2 chr7 49258493 49259846 - processed_pseudogene KNOWN OTTHUMG00000184669.1 1354 1354 1 ENSG00000272931.1 RP5-943J3.2 chr1 89820174 89820868 - lincRNA NOVEL OTTHUMG00000186155.1 695 695 1 ENSG00000279104.1 RP11-138B9.1 chr7 49760897 49762764 - TEC KNOWN OTTHUMG00000173181.1 1868 1868 1 ENSG00000188730.4 VWC2 chr7 49773661 49921950 + protein_coding KNOWN OTTHUMG00000129265.2 148290 11299 4 ENSG00000042813.6 ZPBP chr7 49850421 50121329 - protein_coding KNOWN OTTHUMG00000023528.3 270909 2643 31 ENSG00000223893.1 GNL2P1 chr7 49942251 49944440 - processed_pseudogene KNOWN OTTHUMG00000155879.1 2190 2190 1 ENSG00000164500.6 C7orf72 chr7 50096036 50159830 + protein_coding KNOWN OTTHUMG00000155883.1 63795 2028 9 ENSG00000228005.1 AC020743.2 chr7 50141540 50142823 - antisense NOVEL OTTHUMG00000155880.1 1284 767 3 ENSG00000231681.1 AC020743.3 chr7 50202239 50204318 - lincRNA NOVEL OTTHUMG00000155882.1 2080 808 2 ENSG00000235620.1 AC020743.4 chr7 50274790 50275622 - lincRNA NOVEL OTTHUMG00000155881.1 833 360 3 ENSG00000185811.15 IKZF1 chr7 50304124 50405101 + protein_coding KNOWN OTTHUMG00000155907.1 100978 9784 91 ENSG00000200815.1 RNU6-1091P chr7 50435380 50435486 + snRNA KNOWN NA 107 107 1 ENSG00000171492.13 LRRC8D chr1 89821014 89936611 + protein_coding KNOWN OTTHUMG00000010583.3 115598 4852 20 ENSG00000132436.10 FIGNL1 chr7 50444128 50542535 - protein_coding KNOWN OTTHUMG00000022866.4 98408 5034 49 ENSG00000132437.16 DDC chr7 50458436 50565457 - protein_coding KNOWN OTTHUMG00000023353.5 107022 3136 146 ENSG00000226122.1 DDC-AS1 chr7 50531759 50543463 + antisense NOVEL OTTHUMG00000155976.1 11705 1776 5 ENSG00000106070.16 GRB10 chr7 50590063 50793462 - protein_coding KNOWN OTTHUMG00000150622.10 203400 9944 213 ENSG00000236046.1 AC004920.3 chr7 50839363 50841992 - lincRNA NOVEL OTTHUMG00000155977.1 2630 482 2 ENSG00000228085.1 AC004920.2 chr7 50843578 50843732 - processed_pseudogene KNOWN OTTHUMG00000155975.1 155 155 1 ENSG00000228204.2 RP4-724E13.2 chr7 50866747 51022990 + antisense NOVEL OTTHUMG00000155997.3 156244 911 7 ENSG00000201133.1 SNORA4 chr7 50935350 50935493 - snoRNA NOVEL NA 144 144 1 ENSG00000106078.16 COBL chr7 51016212 51316818 - protein_coding KNOWN OTTHUMG00000155999.1 300607 14304 85 ENSG00000231490.1 RPL7L1P2 chr7 51259429 51260167 - processed_pseudogene KNOWN OTTHUMG00000156002.1 739 739 1 ENSG00000272672.1 RP11-302M6.5 chr1 89939601 89940147 + lincRNA NOVEL OTTHUMG00000186158.1 547 547 1 ENSG00000227233.1 CICP17 chr7 51382284 51384660 + processed_pseudogene KNOWN OTTHUMG00000156000.1 2377 2377 1 ENSG00000228897.1 CTD-2021A8.2 chr7 51386363 51387101 - processed_pseudogene KNOWN OTTHUMG00000155996.1 739 739 1 ENSG00000227080.2 CTD-2021A8.3 chr7 51388430 51389114 - processed_pseudogene KNOWN OTTHUMG00000156003.1 685 685 1 ENSG00000229478.1 ROBO2P1 chr7 51600286 51600573 - processed_pseudogene KNOWN OTTHUMG00000156001.1 288 288 1 ENSG00000229403.1 RP4-718N17.2 chr7 51614251 51630870 + lincRNA NOVEL OTTHUMG00000155998.1 16620 588 2 ENSG00000242650.3 RN7SL292P chr7 51716657 51716922 + misc_RNA KNOWN NA 266 266 1 ENSG00000274604.1 AC006478.1 chr7 51870335 51870402 - miRNA NOVEL NA 68 68 1 ENSG00000233960.1 RP11-153N17.1 chr7 52165235 52192913 - lincRNA NOVEL OTTHUMG00000156033.1 27679 738 4 ENSG00000253028.1 SNORA31 chr7 52269437 52269569 - snoRNA NOVEL NA 133 133 1 ENSG00000234304.2 SGOL1P2 chr7 52891837 52897807 - processed_pseudogene KNOWN OTTHUMG00000155992.2 5971 1589 2 ENSG00000252797.1 RN7SKP272 chr1 89987713 89987944 - misc_RNA KNOWN NA 232 232 1 ENSG00000223970.1 RP11-598O8.1 chr7 53002420 53003429 + processed_pseudogene KNOWN OTTHUMG00000155993.1 1010 1010 1 ENSG00000221900.5 POM121L12 chr7 53035642 53036924 + protein_coding KNOWN OTTHUMG00000155995.1 1283 1283 1 ENSG00000227344.2 HAUS6P1 chr7 53187388 53188938 + processed_pseudogene KNOWN OTTHUMG00000155994.1 1551 1551 1 ENSG00000271194.1 RNF138P2 chr7 53316149 53316740 + processed_pseudogene KNOWN OTTHUMG00000184469.1 592 592 1 ENSG00000199629.1 RNU1-14P chr7 53366058 53366209 + snRNA KNOWN NA 152 152 1 ENSG00000222154.1 RN7SKP218 chr7 53490148 53490439 - misc_RNA KNOWN NA 292 292 1 ENSG00000234105.1 GS1-278J22.1 chr7 53514992 53517116 - lincRNA NOVEL OTTHUMG00000156043.1 2125 366 2 ENSG00000228627.1 GS1-278J22.2 chr7 53559214 53568249 - lincRNA NOVEL OTTHUMG00000156038.1 9036 437 3 ENSG00000205628.2 LINC01446 chr7 53655509 53811931 - lincRNA NOVEL OTTHUMG00000156039.1 156423 3484 6 ENSG00000222355.1 RNU2-29P chr7 53776136 53776324 + snRNA KNOWN NA 189 189 1 ENSG00000228175.3 GEMIN8P4 chr1 89993593 89994321 - processed_pseudogene KNOWN OTTHUMG00000010673.1 729 729 1 ENSG00000271306.1 RAC1P9 chr7 53779783 53780263 + processed_pseudogene KNOWN OTTHUMG00000184468.1 481 392 2 ENSG00000232418.1 RP11-678B3.1 chr7 53787167 53787298 + processed_pseudogene KNOWN OTTHUMG00000156042.1 132 132 1 ENSG00000235454.1 HAUS6P3 chr7 53862233 53863339 + processed_pseudogene KNOWN OTTHUMG00000156040.1 1107 1107 1 ENSG00000238131.1 RP11-806J6.1 chr7 53926676 53947744 - lincRNA NOVEL OTTHUMG00000156041.1 21069 625 3 ENSG00000280920.1 HPVC1 chr7 54201224 54202421 + lincRNA KNOWN OTTHUMG00000189727.1 1198 1198 1 ENSG00000231427.4 LINC01445 chr7 54330697 54349849 + lincRNA NOVEL OTTHUMG00000156067.1 19153 1146 6 ENSG00000213673.3 SLC25A5P3 chr7 54419444 54420328 + processed_pseudogene KNOWN OTTHUMG00000156066.1 885 885 1 ENSG00000170419.9 VSTM2A chr7 54542325 54571080 + protein_coding KNOWN OTTHUMG00000129271.3 28756 5967 34 ENSG00000224223.1 VSTM2A-OT1 chr7 54556970 54571726 + sense_overlapping NOVEL OTTHUMG00000156070.1 14757 3031 4 ENSG00000228735.1 GS1-18A18.2 chr7 54576052 54578794 - lincRNA NOVEL OTTHUMG00000156065.1 2743 757 2 ENSG00000162664.15 ZNF326 chr1 89995112 90035531 + protein_coding KNOWN OTTHUMG00000010675.4 40420 10984 38 ENSG00000200471.1 RNU6-1125P chr7 54621025 54621131 + snRNA KNOWN NA 107 107 1 ENSG00000232612.1 RPL31P35 chr7 54656358 54656734 + processed_pseudogene KNOWN OTTHUMG00000156068.1 377 377 1 ENSG00000132432.12 SEC61G chr7 54752250 54759974 - protein_coding KNOWN OTTHUMG00000023430.3 7725 1842 25 ENSG00000234707.2 RP11-745C15.2 chr7 54759425 54804928 + antisense NOVEL OTTHUMG00000156071.2 45504 481 3 ENSG00000218586.3 RP4-791C19.1 chr7 54933699 54938184 + processed_pseudogene KNOWN OTTHUMG00000156128.1 4486 4486 1 ENSG00000146648.14 EGFR chr7 55019021 55256620 + protein_coding KNOWN OTTHUMG00000023661.3 237600 12961 152 ENSG00000224057.1 EGFR-AS1 chr7 55179750 55188934 - antisense NOVEL OTTHUMG00000156126.1 9185 2806 2 ENSG00000280890.1 ELDR chr7 55235965 55255635 - lincRNA KNOWN OTTHUMG00000189565.1 19671 2941 4 ENSG00000237210.1 RP11-339F13.2 chr7 55244247 55245681 + processed_pseudogene KNOWN OTTHUMG00000156123.2 1435 1435 1 ENSG00000230564.1 CALM1P2 chr7 55259809 55260256 - processed_pseudogene KNOWN OTTHUMG00000156129.1 448 448 1 ENSG00000212459.1 RNU6-695P chr1 90253456 90253559 - snRNA KNOWN NA 104 104 1 ENSG00000230936.1 RP11-775L16.1 chr7 55342316 55344958 + processed_pseudogene KNOWN OTTHUMG00000156118.1 2643 2643 1 ENSG00000132434.8 LANCL2 chr7 55365448 55433742 + protein_coding KNOWN OTTHUMG00000023779.4 68295 5235 30 ENSG00000154978.11 VOPP1 chr7 55436056 55572988 - protein_coding KNOWN OTTHUMG00000156124.3 136933 5364 83 ENSG00000223475.1 RP11-310H4.1 chr7 55573171 55588336 + antisense NOVEL OTTHUMG00000156119.1 15166 552 3 ENSG00000233977.1 RP11-310H4.2 chr7 55592074 55593193 + lincRNA NOVEL OTTHUMG00000156131.1 1120 939 2 ENSG00000231394.1 RP11-310H4.3 chr7 55593777 55595006 + lincRNA NOVEL OTTHUMG00000156122.1 1230 543 2 ENSG00000234844.1 CDC42P2 chr7 55638274 55638842 - processed_pseudogene KNOWN OTTHUMG00000156120.1 569 569 1 ENSG00000235207.1 TUBBP6 chr7 55645620 55646951 + processed_pseudogene KNOWN OTTHUMG00000156117.1 1332 1332 1 ENSG00000231317.1 RP11-310H4.6 chr7 55656768 55678490 - unprocessed_pseudogene KNOWN OTTHUMG00000156127.1 21723 1948 6 ENSG00000176826.14 FKBP9P1 chr7 55681074 55713252 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000097835.3 32179 3458 13 ENSG00000229201.1 RP5-827O9.1 chr1 90510910 90533472 - lincRNA NOVEL OTTHUMG00000010017.1 22563 231 4 ENSG00000252857.1 RNU6-389P chr7 55685977 55686081 + snRNA KNOWN NA 105 105 1 ENSG00000275853.1 Metazoa_SRP chr7 55731100 55731403 + misc_RNA NOVEL NA 304 304 1 ENSG00000224971.1 SUMO2P3 chr7 55732144 55732431 + processed_pseudogene KNOWN OTTHUMG00000156130.1 288 288 1 ENSG00000237799.2 CICP11 chr7 55736779 55739605 + processed_pseudogene KNOWN OTTHUMG00000156121.2 2827 2827 1 ENSG00000275875.1 RP11-613E4.5 chr7 55741525 55741869 + processed_pseudogene KNOWN OTTHUMG00000187669.1 345 345 1 ENSG00000273720.1 RP11-613E4.4 chr7 55743073 55743457 + processed_pseudogene KNOWN OTTHUMG00000187670.1 385 385 1 ENSG00000226278.1 PSPHP1 chr7 55764797 55773288 + unprocessed_pseudogene KNOWN OTTHUMG00000156125.1 8492 261 2 ENSG00000206729.1 RNU6-1126P chr7 55789368 55789474 + snRNA KNOWN NA 107 107 1 ENSG00000154997.8 SEPT14 chr7 55793544 55862789 - protein_coding KNOWN OTTHUMG00000129341.3 69246 3905 15 ENSG00000235738.1 RP11-419M24.2 chr7 55797946 55798480 - processed_pseudogene KNOWN OTTHUMG00000156133.1 535 535 1 ENSG00000199666.2 U3 chr1 90657750 90657964 + snoRNA NOVEL NA 215 215 1 ENSG00000225270.1 CICP12 chr7 55798034 55798876 + processed_pseudogene KNOWN OTTHUMG00000156173.1 843 843 1 ENSG00000229762.1 RP11-419M24.1 chr7 55810779 55811411 - processed_pseudogene KNOWN OTTHUMG00000156134.1 633 633 1 ENSG00000225018.1 RP11-419M24.5 chr7 55876738 55877024 - processed_pseudogene KNOWN OTTHUMG00000156174.1 287 287 1 ENSG00000227499.1 RP11-419M24.4 chr7 55877912 55878164 + processed_pseudogene KNOWN OTTHUMG00000156176.1 253 253 1 ENSG00000249773.3 MRPS17 chr7 55887277 55955239 + protein_coding PUTATIVE OTTHUMG00000160988.1 67963 1732 8 ENSG00000178665.13 ZNF713 chr7 55887476 55942225 + protein_coding KNOWN OTTHUMG00000156175.1 54750 6155 22 ENSG00000146729.8 GBAS chr7 55951793 56000181 + protein_coding KNOWN OTTHUMG00000022932.3 48389 5651 69 ENSG00000239789.4 MRPS17 chr7 55951819 55956501 + protein_coding KNOWN OTTHUMG00000023153.4 4683 2159 6 ENSG00000146733.12 PSPH chr7 56011051 56051604 - protein_coding KNOWN OTTHUMG00000023441.9 40554 2762 62 ENSG00000146731.9 CCT6A chr7 56051630 56063989 + protein_coding KNOWN OTTHUMG00000022842.3 12360 3901 49 ENSG00000264341.1 MIR4417 chr1 5564071 5564143 + miRNA KNOWN NA 73 73 1 ENSG00000143032.7 BARHL2 chr1 90711539 90717237 - protein_coding KNOWN OTTHUMG00000010020.2 5699 1979 3 ENSG00000206603.1 SNORA22 chr7 56055365 56055502 + snoRNA NOVEL NA 138 138 1 ENSG00000207168.1 SNORA15 chr7 56060470 56060602 + snoRNA KNOWN NA 133 133 1 ENSG00000129103.16 SUMF2 chr7 56064002 56080670 + protein_coding KNOWN OTTHUMG00000129373.8 16669 4101 129 ENSG00000164776.8 PHKG1 chr7 56080283 56092996 - protein_coding KNOWN OTTHUMG00000023869.3 12714 2762 61 ENSG00000106153.12 CHCHD2 chr7 56101569 56106576 - protein_coding KNOWN OTTHUMG00000129429.2 5008 1132 7 ENSG00000185290.3 NUPR1L chr7 56114681 56116400 - protein_coding KNOWN OTTHUMG00000156224.2 1720 603 2 ENSG00000230191.1 RP4-725G10.3 chr7 56163145 56163533 + processed_pseudogene KNOWN OTTHUMG00000156228.2 389 389 1 ENSG00000233028.1 RP4-725G10.4 chr7 56175634 56176412 + processed_pseudogene KNOWN OTTHUMG00000156223.1 779 779 1 ENSG00000227491.1 CCNJP1 chr7 56228634 56229782 - processed_pseudogene KNOWN OTTHUMG00000156229.1 1149 1149 1 ENSG00000223559.1 RP11-700P18.1 chr7 56288230 56291425 + processed_pseudogene KNOWN OTTHUMG00000156227.1 3196 2884 2 ENSG00000233593.5 RP4-665J23.1 chr1 90782986 90851650 - lincRNA NOVEL OTTHUMG00000010018.2 68665 3898 11 ENSG00000224155.2 RP11-700P18.2 chr7 56304678 56305526 - processed_pseudogene KNOWN OTTHUMG00000156230.1 849 849 1 ENSG00000203462.2 RP11-814E24.1 chr7 56322804 56323601 + unprocessed_pseudogene KNOWN OTTHUMG00000156222.1 798 340 2 ENSG00000202296.1 RNU6-1335P chr7 56340231 56340337 - snRNA KNOWN NA 107 107 1 ENSG00000231299.1 RP11-419M24.6 chr7 56360362 56360541 - unprocessed_pseudogene KNOWN OTTHUMG00000156225.1 180 180 1 ENSG00000225371.1 CICP8 chr7 56362458 56365270 + processed_pseudogene KNOWN OTTHUMG00000156226.1 2813 2813 1 ENSG00000224370.1 RP11-814E24.3 chr7 56380976 56381312 + processed_pseudogene KNOWN OTTHUMG00000156221.1 337 337 1 ENSG00000223330.1 RNU6-1052P chr7 56402070 56402173 - snRNA KNOWN NA 104 104 1 ENSG00000232944.1 RP13-492C18.1 chr7 56408699 56409210 - processed_pseudogene KNOWN OTTHUMG00000156294.1 512 186 2 ENSG00000237268.2 RP13-492C18.2 chr7 56421857 56448375 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156291.1 26519 1835 9 ENSG00000278205.1 RP11-760D2.13 chr7 56462536 56467771 + unprocessed_pseudogene KNOWN OTTHUMG00000187671.1 5236 1652 2 ENSG00000225446.1 RP4-665J23.2 chr1 90851759 90854286 + lincRNA NOVEL OTTHUMG00000010019.1 2528 580 2 ENSG00000225488.1 RP11-760D2.1 chr7 56482105 56483295 - lincRNA NOVEL OTTHUMG00000156289.1 1191 673 2 ENSG00000226485.1 RBM22P3 chr7 56490682 56491635 + processed_pseudogene KNOWN OTTHUMG00000156300.1 954 954 1 ENSG00000261275.1 RP11-760D2.11 chr7 56493124 56497285 + lincRNA NOVEL OTTHUMG00000173245.1 4162 4162 1 ENSG00000231504.1 NMD3P2 chr7 56502284 56503044 - processed_pseudogene KNOWN OTTHUMG00000156288.1 761 761 1 ENSG00000223740.1 RP11-760D2.4 chr7 56525428 56526113 - processed_pseudogene KNOWN OTTHUMG00000156298.1 686 686 1 ENSG00000233288.1 RP11-760D2.5 chr7 56534230 56538130 - lincRNA NOVEL OTTHUMG00000156290.1 3901 2741 2 ENSG00000224947.1 VN1R25P chr7 56559221 56559958 + processed_pseudogene KNOWN OTTHUMG00000156299.1 738 738 1 ENSG00000213650.3 RP11-760D2.7 chr7 56567906 56568858 - processed_pseudogene KNOWN OTTHUMG00000156297.1 953 669 2 ENSG00000234716.1 RP11-760D2.9 chr7 56577848 56578866 + processed_pseudogene KNOWN OTTHUMG00000156295.1 1019 210 2 ENSG00000213067.2 RP11-760D2.10 chr7 56597379 56598342 + processed_pseudogene KNOWN OTTHUMG00000156296.1 964 964 1 ENSG00000272094.1 RP4-665J23.4 chr1 90860550 90862920 - lincRNA NOVEL OTTHUMG00000185352.1 2371 879 2 ENSG00000271047.1 RP11-760D2.12 chr7 56603410 56603553 + processed_pseudogene KNOWN OTTHUMG00000184467.1 144 144 1 ENSG00000229909.1 TRIM60P16 chr7 56631739 56632727 - processed_pseudogene KNOWN OTTHUMG00000156293.1 989 694 2 ENSG00000228303.1 RP11-10F11.2 chr7 56638943 56650696 - unprocessed_pseudogene KNOWN OTTHUMG00000156287.1 11754 1591 3 ENSG00000277174.1 RP11-10F11.3 chr7 56685036 56687366 - unprocessed_pseudogene KNOWN OTTHUMG00000187672.1 2331 1070 3 ENSG00000268187.6 AC118758.1 chr7 56804059 56804689 + protein_coding KNOWN NA 631 468 2 ENSG00000277253.1 RP13-580B18.2 chr7 56805336 56808148 + processed_pseudogene KNOWN OTTHUMG00000187673.1 2813 2813 1 ENSG00000279072.1 RP13-580B18.4 chr7 56809214 56848800 - lincRNA NOVEL OTTHUMG00000189377.1 39587 24137 18 ENSG00000233437.1 RP13-580B18.1 chr7 56875385 56882146 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156292.1 6762 610 7 ENSG00000225244.3 RP11-220H4.2 chr7 56940341 56944353 - unprocessed_pseudogene KNOWN OTTHUMG00000156100.1 4013 544 4 ENSG00000264426.1 MIR4283-2 chr7 56955785 56955864 - miRNA KNOWN NA 80 80 1 ENSG00000232882.1 PHKA1P1 chr1 90892992 90893612 - processed_pseudogene KNOWN OTTHUMG00000057595.1 621 621 1 ENSG00000189166.6 TNRC18P3 chr7 56991888 57009149 + unprocessed_pseudogene KNOWN OTTHUMG00000156098.1 17262 2691 11 ENSG00000214668.4 SLC29A4P1 chr7 57014285 57020273 - unprocessed_pseudogene KNOWN OTTHUMG00000156099.1 5989 971 5 ENSG00000229508.2 PHKG1P4 chr7 57060590 57061301 - unprocessed_pseudogene KNOWN OTTHUMG00000156681.1 712 370 2 ENSG00000275061.1 RP11-220H4.6 chr7 57067949 57074683 - unprocessed_pseudogene KNOWN OTTHUMG00000187674.1 6735 267 2 ENSG00000185177.11 ZNF479 chr7 57119614 57139864 - protein_coding KNOWN OTTHUMG00000156682.1 20251 2075 15 ENSG00000235095.1 RP11-1217F2.1 chr7 57147986 57150347 - unprocessed_pseudogene KNOWN OTTHUMG00000156694.1 2362 1980 3 ENSG00000231537.1 RP11-1217F2.3 chr7 57167880 57168651 + unprocessed_pseudogene KNOWN OTTHUMG00000156676.1 772 772 1 ENSG00000225295.1 MTND4P4 chr7 57169406 57170771 + unprocessed_pseudogene KNOWN OTTHUMG00000156690.1 1366 1366 1 ENSG00000228440.1 MTND5P6 chr7 57170974 57172771 + unprocessed_pseudogene KNOWN OTTHUMG00000156679.1 1798 1798 1 ENSG00000224880.1 RP11-1217F2.7 chr7 57173357 57174362 + unprocessed_pseudogene KNOWN OTTHUMG00000156688.1 1006 1006 1 ENSG00000122482.19 ZNF644 chr1 90915298 91022272 - protein_coding KNOWN OTTHUMG00000010078.3 106975 7604 42 ENSG00000224723.1 GUSBP10 chr7 57177409 57180052 - unprocessed_pseudogene KNOWN OTTHUMG00000156683.1 2644 665 4 ENSG00000230764.1 MTND1P4 chr7 57185788 57186202 + unprocessed_pseudogene KNOWN OTTHUMG00000156687.1 415 415 1 ENSG00000237309.1 MTND2P6 chr7 57186412 57187441 + unprocessed_pseudogene KNOWN OTTHUMG00000156691.1 1030 1030 1 ENSG00000236692.1 RP11-1217F2.9 chr7 57187892 57190140 + unprocessed_pseudogene KNOWN OTTHUMG00000156693.1 2249 2249 1 ENSG00000228851.1 RP11-1217F2.10 chr7 57191141 57191927 + unprocessed_pseudogene KNOWN OTTHUMG00000156678.1 787 787 1 ENSG00000227584.1 MTND4P5 chr7 57192694 57194068 + unprocessed_pseudogene KNOWN OTTHUMG00000156680.1 1375 1375 1 ENSG00000230531.1 MTND5P7 chr7 57194257 57196054 + unprocessed_pseudogene KNOWN OTTHUMG00000156692.1 1798 1798 1 ENSG00000234671.1 RP11-1217F2.13 chr7 57196638 57197772 + unprocessed_pseudogene KNOWN OTTHUMG00000156684.1 1135 1135 1 ENSG00000169325.10 GUSBP12 chr7 57200825 57203597 - unprocessed_pseudogene KNOWN OTTHUMG00000156685.1 2773 720 4 ENSG00000234089.1 RP11-1217F2.15 chr7 57209865 57222174 - lincRNA NOVEL OTTHUMG00000156695.1 12310 835 4 ENSG00000232393.1 RPL5P6 chr1 91023919 91024804 + processed_pseudogene KNOWN OTTHUMG00000010077.1 886 886 1 ENSG00000238431.1 RNU7-157P chr7 57227001 57227066 + snRNA KNOWN NA 66 66 1 ENSG00000274299.1 RP11-114G11.3 chr7 57270839 57275197 + unprocessed_pseudogene KNOWN OTTHUMG00000187675.1 4359 1059 2 ENSG00000280225.1 RP11-114G11.4 chr7 57402181 57404717 - TEC KNOWN OTTHUMG00000188289.1 2537 2537 1 ENSG00000260653.4 RP11-114G11.5 chr7 57404771 57416203 + lincRNA NOVEL OTTHUMG00000175570.1 11433 3154 8 ENSG00000266168.1 MIR3147 chr7 57405025 57405090 + miRNA KNOWN NA 66 66 1 ENSG00000227182.1 VN1R28P chr7 57422830 57423725 - unitary_pseudogene KNOWN OTTHUMG00000154495.1 896 896 1 ENSG00000235368.1 SAPCD2P2 chr7 57424503 57425676 + processed_pseudogene KNOWN OTTHUMG00000156686.2 1174 1174 1 ENSG00000182111.8 ZNF716 chr7 57450177 57473546 + protein_coding KNOWN OTTHUMG00000156689.1 23370 5197 4 ENSG00000270957.1 RP11-1324A7.2 chr7 57485166 57485895 + processed_pseudogene KNOWN OTTHUMG00000184463.1 730 200 2 ENSG00000233601.1 NCOR1P3 chr7 57599794 57610104 + unprocessed_pseudogene KNOWN OTTHUMG00000156081.1 10311 303 2 ENSG00000162669.14 HFM1 chr1 91260766 91404869 - protein_coding KNOWN OTTHUMG00000010093.4 144104 5827 120 ENSG00000243981.4 RP11-368M16.3 chr7 57628479 57645189 - transcribed_processed_pseudogene KNOWN OTTHUMG00000156084.2 16711 1022 12 ENSG00000270749.1 RP11-368M16.10 chr7 57629285 57630151 + processed_pseudogene KNOWN OTTHUMG00000184462.1 867 867 1 ENSG00000229627.2 RP11-368M16.4 chr7 57638725 57639112 + processed_pseudogene KNOWN OTTHUMG00000156086.1 388 388 1 ENSG00000230796.1 RP11-368M16.9 chr7 57650381 57651119 - unprocessed_pseudogene KNOWN OTTHUMG00000156095.1 739 201 2 ENSG00000237639.2 RP11-368M16.5 chr7 57650521 57650854 + unprocessed_pseudogene KNOWN OTTHUMG00000156089.1 334 334 1 ENSG00000233962.1 RP11-368M16.8 chr7 57652736 57653459 - unprocessed_pseudogene KNOWN OTTHUMG00000156082.1 724 196 2 ENSG00000236261.1 RP11-368M16.6 chr7 57652875 57653208 + unprocessed_pseudogene KNOWN OTTHUMG00000156087.1 334 334 1 ENSG00000234085.1 RP11-368M16.7 chr7 57654822 57655392 + unprocessed_pseudogene KNOWN OTTHUMG00000156092.1 571 571 1 ENSG00000227015.1 RP11-548K12.6 chr7 57770619 57770946 - unprocessed_pseudogene KNOWN OTTHUMG00000156097.1 328 328 1 ENSG00000232161.1 RP11-548K12.7 chr7 57770966 57771173 + unprocessed_pseudogene KNOWN OTTHUMG00000156094.1 208 208 1 ENSG00000206817.1 Y_RNA chr1 91261625 91261724 + misc_RNA NOVEL NA 100 100 1 ENSG00000230271.1 RP11-548K12.5 chr7 57772584 57773199 - unprocessed_pseudogene KNOWN OTTHUMG00000156079.1 616 616 1 ENSG00000250923.1 RP11-548K12.8 chr7 57773183 57773381 + unprocessed_pseudogene KNOWN OTTHUMG00000156077.1 199 199 1 ENSG00000224484.1 RP11-548K12.4 chr7 57776972 57777521 - unprocessed_pseudogene KNOWN OTTHUMG00000156091.1 550 550 1 ENSG00000236907.1 RP11-548K12.3 chr7 57817601 57818012 - unprocessed_pseudogene KNOWN OTTHUMG00000156078.1 412 412 1 ENSG00000250618.1 RP11-548K12.9 chr7 57817996 57818197 + unprocessed_pseudogene KNOWN OTTHUMG00000156096.1 202 202 1 ENSG00000224653.1 RP11-548K12.10 chr7 57819819 57820627 + unprocessed_pseudogene KNOWN OTTHUMG00000156083.1 809 278 2 ENSG00000223836.1 RP11-548K12.2 chr7 57820032 57820410 - unprocessed_pseudogene KNOWN OTTHUMG00000156085.1 379 379 1 ENSG00000237236.1 RP11-548K12.11 chr7 57822201 57822942 + unprocessed_pseudogene KNOWN OTTHUMG00000156090.1 742 200 2 ENSG00000231232.4 RP11-548K12.1 chr7 57822465 57822801 - unprocessed_pseudogene KNOWN OTTHUMG00000156093.1 337 337 1 ENSG00000231484.1 RP11-548K12.12 chr7 57828331 57837046 + unprocessed_pseudogene KNOWN OTTHUMG00000156088.1 8716 407 3 ENSG00000215873.2 FEN1P1 chr1 91328369 91329513 + processed_pseudogene KNOWN OTTHUMG00000010098.1 1145 1145 1 ENSG00000271696.1 RP11-548K12.13 chr7 57835309 57836251 - processed_pseudogene KNOWN OTTHUMG00000184699.1 943 943 1 ENSG00000233918.1 RP11-715L17.1 chr7 62275361 62275678 - processed_pseudogene KNOWN OTTHUMG00000156204.2 318 318 1 ENSG00000207443.1 RNU6-417P chr7 63011463 63011569 - snRNA KNOWN NA 107 107 1 ENSG00000227148.1 RP11-196D18.1 chr7 63044827 63054431 - lincRNA NOVEL OTTHUMG00000156274.1 9605 419 2 ENSG00000233454.1 RP11-196D18.2 chr7 63057453 63060084 + unprocessed_pseudogene KNOWN OTTHUMG00000156261.1 2632 275 2 ENSG00000265865.1 AC069285.1 chr7 63068087 63068151 - miRNA NOVEL NA 65 65 1 ENSG00000233782.1 ZNF90P3 chr7 63087070 63088261 - processed_pseudogene KNOWN OTTHUMG00000156264.2 1192 1192 1 ENSG00000234312.1 SAPCD2P4 chr7 63113635 63114805 - processed_pseudogene KNOWN OTTHUMG00000156271.2 1171 1171 1 ENSG00000231523.1 RP11-196D18.5 chr7 63117501 63154934 - unprocessed_pseudogene KNOWN OTTHUMG00000156275.1 37434 648 6 ENSG00000199231.1 snoU2_19 chr7 63175940 63176019 - snoRNA NOVEL NA 80 80 1 ENSG00000236948.1 RP11-154H17.1 chr1 5587368 5668295 - lincRNA NOVEL OTTHUMG00000041453.1 80928 363 2 ENSG00000097046.11 CDC7 chr1 91500893 91525764 + protein_coding KNOWN OTTHUMG00000047810.2 24872 3557 38 ENSG00000237572.1 RP11-373D7.1 chr7 63209219 63211822 + unprocessed_pseudogene KNOWN OTTHUMG00000156260.1 2604 261 2 ENSG00000226075.2 PHKG1P1 chr7 63233035 63234245 - unprocessed_pseudogene KNOWN OTTHUMG00000156263.1 1211 614 4 ENSG00000244550.1 RP5-905H7.3 chr7 63233115 63241645 - processed_transcript NOVEL OTTHUMG00000156267.1 8531 351 3 ENSG00000240651.1 SEPT7P4 chr7 63241590 63248321 - unprocessed_pseudogene KNOWN OTTHUMG00000156262.1 6732 306 2 ENSG00000236638.1 RP5-905H7.4 chr7 63263065 63263456 + processed_pseudogene KNOWN OTTHUMG00000156269.1 392 392 1 ENSG00000185037.9 ZNF733P chr7 63291518 63304056 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156270.1 12539 1641 7 ENSG00000226587.1 RP5-905H7.9 chr7 63326674 63354326 - lincRNA NOVEL OTTHUMG00000156272.1 27653 517 3 ENSG00000227298.1 ARAFP3 chr7 63342711 63343200 + processed_pseudogene KNOWN OTTHUMG00000156266.1 490 490 1 ENSG00000232165.1 RP5-905H7.6 chr7 63345840 63346732 + processed_pseudogene KNOWN OTTHUMG00000156265.1 893 893 1 ENSG00000230000.2 RP5-905H7.11 chr7 63348861 63351774 + processed_transcript NOVEL OTTHUMG00000187145.1 2914 2914 5 ENSG00000241318.3 WDR82P2 chr1 91534666 91535593 - processed_pseudogene KNOWN OTTHUMG00000010094.3 928 928 1 ENSG00000227545.1 RP5-905H7.10 chr7 63349154 63350059 - processed_pseudogene KNOWN OTTHUMG00000156276.1 906 906 1 ENSG00000227923.1 RP5-905H7.7 chr7 63354033 63354365 + processed_pseudogene KNOWN OTTHUMG00000156268.1 333 333 1 ENSG00000229301.1 RP5-905H7.8 chr7 63354457 63359306 + lincRNA NOVEL OTTHUMG00000156273.1 4850 528 3 ENSG00000236284.1 VN1R31P chr7 63367427 63368156 - processed_pseudogene KNOWN OTTHUMG00000156377.1 730 730 1 ENSG00000230361.1 VN1R32P chr7 63377329 63378233 + unitary_pseudogene KNOWN OTTHUMG00000154490.1 905 905 1 ENSG00000230600.1 RP11-73B2.2 chr7 63380466 63385789 - lincRNA NOVEL OTTHUMG00000156385.1 5324 339 2 ENSG00000232817.1 RP11-73B2.4 chr7 63388808 63393657 - lincRNA NOVEL OTTHUMG00000156386.1 4850 528 3 ENSG00000223889.1 RP11-73B2.3 chr7 63393749 63394109 - processed_pseudogene KNOWN OTTHUMG00000156382.1 361 361 1 ENSG00000227305.1 RP11-340I6.3 chr7 63393788 63422046 + lincRNA NOVEL OTTHUMG00000156378.1 28259 701 4 ENSG00000234387.1 RP11-340I6.1 chr7 63394277 63395439 + lincRNA NOVEL OTTHUMG00000156380.1 1163 673 2 ENSG00000229067.1 RP11-91I11.1 chr1 91600171 91600321 + processed_pseudogene KNOWN OTTHUMG00000010100.1 151 151 1 ENSG00000268181.3 RP11-73B2.7 chr7 63396341 63399250 - processed_transcript NOVEL OTTHUMG00000188126.1 2910 2910 3 ENSG00000234467.1 SLC25A1P2 chr7 63398046 63398957 + processed_pseudogene KNOWN OTTHUMG00000156383.1 912 912 1 ENSG00000227426.1 VN1R33P chr7 63401385 63402271 - unitary_pseudogene KNOWN OTTHUMG00000154474.1 887 887 1 ENSG00000224368.1 ARAFP2 chr7 63404842 63405400 - processed_pseudogene KNOWN OTTHUMG00000156379.1 559 559 1 ENSG00000197990.6 ZNF734P chr7 63449819 63456687 + unprocessed_pseudogene KNOWN OTTHUMG00000156384.1 6869 1534 3 ENSG00000230132.1 RP5-1193P9.2 chr7 63480598 63480989 - processed_pseudogene KNOWN OTTHUMG00000156381.1 392 392 1 ENSG00000164740.5 SEPT7P5 chr7 63495799 63502536 + processed_pseudogene KNOWN OTTHUMG00000156390.1 6738 306 2 ENSG00000228645.2 PHKG1P2 chr7 63509303 63510165 + processed_pseudogene KNOWN OTTHUMG00000156389.1 863 863 1 ENSG00000214660.6 SLC29A4P2 chr7 63556598 63562588 + unprocessed_pseudogene KNOWN OTTHUMG00000156502.1 5991 1089 5 ENSG00000223566.1 TNRC18P2 chr7 63567743 63585075 - unprocessed_pseudogene KNOWN OTTHUMG00000156501.1 17333 2714 11 ENSG00000203914.4 HSP90B3P chr1 91642516 91644082 + processed_pseudogene KNOWN OTTHUMG00000010095.2 1567 1567 1 ENSG00000265214.1 MIR4283-1 chr7 63621090 63621169 + miRNA KNOWN NA 80 80 1 ENSG00000226401.3 RP5-965K10.3 chr7 63632608 63636617 + unprocessed_pseudogene KNOWN OTTHUMG00000156503.1 4010 570 4 ENSG00000226411.1 CTD-2526L21.2 chr7 63699390 63700441 + unprocessed_pseudogene KNOWN OTTHUMG00000156504.1 1052 223 2 ENSG00000275217.2 AC079355.1 chr7 63762476 63765094 + protein_coding KNOWN NA 2619 648 3 ENSG00000271466.1 CICP24 chr7 63768257 63771047 - processed_pseudogene KNOWN OTTHUMG00000184703.1 2791 2705 2 ENSG00000227397.1 CTD-2526L21.3 chr7 63789909 63790098 + processed_pseudogene KNOWN OTTHUMG00000156547.1 190 190 1 ENSG00000236574.1 RP11-340I6.4 chr7 63843314 63843505 + processed_pseudogene KNOWN OTTHUMG00000156546.1 192 192 1 ENSG00000225451.1 RP11-340I6.5 chr7 63876341 63877350 + processed_pseudogene KNOWN OTTHUMG00000156549.1 1010 1010 1 ENSG00000236299.6 RP11-340I6.7 chr7 63888200 63900794 - lincRNA NOVEL OTTHUMG00000156552.4 12595 1856 26 ENSG00000235720.1 RP11-340I6.6 chr7 63893286 63894641 + processed_pseudogene KNOWN OTTHUMG00000156550.1 1356 1356 1 ENSG00000069702.9 TGFBR3 chr1 91680343 91906335 - protein_coding KNOWN OTTHUMG00000010097.4 225993 8705 124 ENSG00000226581.1 RP11-340I6.8 chr7 63900823 63917994 + lincRNA NOVEL OTTHUMG00000156551.1 17172 637 4 ENSG00000263891.1 AC092634.1 chr7 63901068 63901133 + miRNA NOVEL NA 66 66 1 ENSG00000226342.1 NMD3P1 chr7 63908966 63910453 - processed_pseudogene KNOWN OTTHUMG00000156544.1 1488 1488 1 ENSG00000227910.1 RP11-73B2.6 chr7 63924787 63926306 - transcribed_processed_pseudogene KNOWN OTTHUMG00000156556.1 1520 876 5 ENSG00000265017.1 AC092634.2 chr7 63926836 63926901 + miRNA NOVEL NA 66 66 1 ENSG00000213645.2 SLC25A1P3 chr7 63931141 63931968 + processed_pseudogene KNOWN OTTHUMG00000156555.1 828 828 1 ENSG00000233173.1 VN1R34P chr7 63934449 63935331 - unitary_pseudogene KNOWN OTTHUMG00000154486.1 883 883 1 ENSG00000231264.1 ARAFP1 chr7 63937905 63938509 - processed_pseudogene KNOWN OTTHUMG00000188127.1 605 605 1 ENSG00000228660.1 VN1R35P chr7 63963431 63964123 - unprocessed_pseudogene KNOWN OTTHUMG00000156545.1 693 693 1 ENSG00000230639.1 VN1R36P chr7 63965834 63966124 - unprocessed_pseudogene KNOWN OTTHUMG00000156548.1 291 291 1 ENSG00000239794.3 RN7SL653P chr1 91829774 91830066 - misc_RNA KNOWN NA 293 293 1 ENSG00000176232.10 RP5-1193P9.4 chr7 63980385 63981477 - unprocessed_pseudogene KNOWN OTTHUMG00000156553.1 1093 199 2 ENSG00000278577.1 RP11-340I6.11 chr7 63993904 63994006 + unprocessed_pseudogene KNOWN OTTHUMG00000187677.1 103 103 1 ENSG00000241149.2 RP11-561N12.2 chr7 64005576 64016130 + unprocessed_pseudogene KNOWN OTTHUMG00000156485.2 10555 1001 3 ENSG00000228564.1 LINC01005 chr7 64027852 64030105 - antisense NOVEL OTTHUMG00000156482.1 2254 851 6 ENSG00000214652.5 ZNF727 chr7 64045443 64078549 + protein_coding NOVEL OTTHUMG00000156536.2 33107 1679 4 ENSG00000223558.1 TRIM60P17 chr7 64085560 64086576 + processed_pseudogene KNOWN OTTHUMG00000156471.1 1017 719 2 ENSG00000224458.3 GUSBP6 chr7 64100305 64150721 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156481.1 50417 1724 9 ENSG00000248704.1 MTND4P2 chr7 64104093 64105295 - unprocessed_pseudogene KNOWN OTTHUMG00000156480.1 1203 1203 1 ENSG00000248315.1 RP11-3N2.11 chr7 64105292 64105576 - unprocessed_pseudogene KNOWN OTTHUMG00000156473.1 285 285 1 ENSG00000230052.1 MTND3P2 chr7 64105654 64105995 - unprocessed_pseudogene KNOWN OTTHUMG00000156478.1 342 342 1 ENSG00000137948.17 BRDT chr1 91949371 92014426 + protein_coding KNOWN OTTHUMG00000010113.4 65056 4334 168 ENSG00000233385.1 RP11-3N2.9 chr7 64106065 64106819 - unprocessed_pseudogene KNOWN OTTHUMG00000156470.1 755 755 1 ENSG00000227035.1 RP11-3N2.8 chr7 64106822 64107572 - unprocessed_pseudogene KNOWN OTTHUMG00000156484.1 751 673 2 ENSG00000234234.1 RP11-3N2.7 chr7 64107829 64108486 - unprocessed_pseudogene KNOWN OTTHUMG00000156476.1 658 658 1 ENSG00000234700.1 RP11-3N2.5 chr7 64108625 64110147 - unprocessed_pseudogene KNOWN OTTHUMG00000156474.1 1523 1523 1 ENSG00000230252.1 MTND2P4 chr7 64110547 64111550 - unprocessed_pseudogene KNOWN OTTHUMG00000156475.1 1004 1004 1 ENSG00000235646.1 MTND1P2 chr7 64111752 64112572 - unprocessed_pseudogene KNOWN OTTHUMG00000156488.1 821 821 1 ENSG00000229881.1 RP11-321E8.4 chr7 64140495 64150058 + lincRNA NOVEL OTTHUMG00000156487.1 9564 448 3 ENSG00000236976.1 RP11-165H4.2 chr7 64141538 64142401 - processed_pseudogene KNOWN OTTHUMG00000156477.1 864 864 1 ENSG00000213643.3 VN1R37P chr7 64149685 64150432 - processed_pseudogene KNOWN OTTHUMG00000156479.1 748 748 1 ENSG00000235227.1 VN1R38P chr7 64180006 64180892 - unitary_pseudogene KNOWN OTTHUMG00000154469.1 887 887 1 ENSG00000172031.6 EPHX4 chr1 92029982 92063536 + protein_coding KNOWN OTTHUMG00000010114.1 33555 2251 9 ENSG00000213644.2 SAPCD2P1 chr7 64181710 64182893 + processed_pseudogene KNOWN OTTHUMG00000156472.1 1184 1184 1 ENSG00000223614.3 ZNF735 chr7 64207090 64470627 + protein_coding KNOWN OTTHUMG00000156539.2 263538 2436 16 ENSG00000197123.8 ZNF679 chr7 64228474 64266931 + protein_coding KNOWN OTTHUMG00000156486.2 38458 1567 9 ENSG00000234444.8 ZNF736 chr7 64307459 64354860 + protein_coding KNOWN OTTHUMG00000156537.3 47402 9409 27 ENSG00000227986.1 TRIM60P18 chr7 64355078 64356199 + unprocessed_pseudogene KNOWN OTTHUMG00000156540.1 1122 828 2 ENSG00000276650.1 RP11-321E8.8 chr7 64425623 64426334 - unprocessed_pseudogene KNOWN OTTHUMG00000187679.1 712 211 2 ENSG00000232727.2 YWHAEP1 chr7 64433830 64434592 + processed_pseudogene KNOWN OTTHUMG00000156252.1 763 763 1 ENSG00000223845.1 VN1R40P chr7 64443802 64444742 - unitary_pseudogene KNOWN OTTHUMG00000154491.1 941 941 1 ENSG00000228014.1 ZNF680P1 chr7 64469185 64470653 + processed_pseudogene KNOWN OTTHUMG00000156541.1 1469 1469 1 ENSG00000228653.2 HNRNPCP7 chr7 64500825 64501729 + processed_pseudogene KNOWN OTTHUMG00000156253.1 905 905 1 ENSG00000233228.1 LPCAT2BP chr1 92066306 92067839 + unitary_pseudogene KNOWN OTTHUMG00000010112.2 1534 1534 1 ENSG00000173041.10 ZNF680 chr7 64519884 64563106 - protein_coding KNOWN OTTHUMG00000156542.2 43223 5586 16 ENSG00000223974.1 BNIP3P42 chr7 64551498 64552066 + processed_pseudogene KNOWN OTTHUMG00000156543.1 569 569 1 ENSG00000235349.1 RP11-561N12.6 chr7 64566814 64567443 - processed_pseudogene KNOWN OTTHUMG00000156535.1 630 315 2 ENSG00000213642.3 RP11-561N12.5 chr7 64569428 64570437 - processed_pseudogene KNOWN OTTHUMG00000156538.1 1010 1010 1 ENSG00000224669.1 RP11-561N12.1 chr7 64582733 64583207 + processed_pseudogene KNOWN OTTHUMG00000156251.1 475 475 1 ENSG00000276475.1 RP11-561N12.8 chr7 64590599 64591133 - processed_pseudogene KNOWN OTTHUMG00000187680.1 535 535 1 ENSG00000196247.10 ZNF107 chr7 64666083 64711582 + protein_coding KNOWN OTTHUMG00000129433.2 45500 7162 28 ENSG00000271550.1 BNIP3P11 chr7 64678954 64687393 - processed_pseudogene KNOWN OTTHUMG00000184529.1 8440 563 2 ENSG00000275667.1 MIR6839 chr7 64679064 64679176 + miRNA KNOWN NA 113 113 1 ENSG00000224172.1 RP11-416N13.1 chr7 64735933 64736743 - processed_pseudogene KNOWN OTTHUMG00000156599.2 811 811 1 ENSG00000230667.5 SETSIP chr1 92074533 92075441 - protein_coding KNOWN OTTHUMG00000010287.3 909 909 2 ENSG00000277206.1 RP11-797H7.6 chr7 64768156 64769101 + unprocessed_pseudogene KNOWN OTTHUMG00000187681.1 946 186 2 ENSG00000197008.8 ZNF138 chr7 64794388 64833681 + protein_coding KNOWN OTTHUMG00000156603.3 39294 2850 26 ENSG00000234338.1 RP11-797H7.1 chr7 64835280 64836882 - processed_pseudogene KNOWN OTTHUMG00000156601.1 1603 1603 1 ENSG00000182722.5 SEPHS1P1 chr7 64852397 64853354 - processed_pseudogene KNOWN OTTHUMG00000156602.1 958 958 1 ENSG00000213640.3 EEF1DP4 chr7 64862999 64864370 + processed_pseudogene KNOWN OTTHUMG00000156600.1 1372 880 2 ENSG00000198039.10 ZNF273 chr7 64870172 64930966 + protein_coding KNOWN OTTHUMG00000149837.3 60795 8652 30 ENSG00000189316.3 RP11-797H7.5 chr7 64888527 64890100 - antisense NOVEL OTTHUMG00000156628.1 1574 1062 3 ENSG00000223476.1 VN1R42P chr7 64933273 64933616 + processed_pseudogene KNOWN OTTHUMG00000156629.1 344 344 1 ENSG00000270948.1 RP11-460N20.7 chr7 64942143 64942926 - processed_pseudogene KNOWN OTTHUMG00000184712.1 784 784 1 ENSG00000152926.13 ZNF117 chr7 64971776 65006684 - protein_coding KNOWN OTTHUMG00000156631.12 34909 10691 14 ENSG00000216045.2 AL356693.1 chr1 5815871 5815959 - miRNA NOVEL NA 89 89 1 ENSG00000189195.8 BTBD8 chr1 92080305 92147836 + protein_coding KNOWN OTTHUMG00000010289.1 67532 1955 15 ENSG00000213462.4 ERV3-1 chr7 64990809 65006743 - protein_coding KNOWN OTTHUMG00000165023.4 15935 4574 6 ENSG00000201165.1 RNU6-1229P chr7 65023204 65023310 - snRNA KNOWN NA 107 107 1 ENSG00000234585.5 CCT6P3 chr7 65038354 65074713 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156630.1 36360 3920 32 ENSG00000239985.2 RP11-460N20.3 chr7 65038372 65038565 + unprocessed_pseudogene KNOWN OTTHUMG00000156633.2 194 194 1 ENSG00000207344.1 SNORA22 chr7 65065999 65066132 + snoRNA NOVEL NA 134 134 1 ENSG00000207062.1 SNORA15 chr7 65070538 65070672 + snoRNA NOVEL NA 135 135 1 ENSG00000227113.2 RP11-460N20.4 chr7 65075023 65078780 + unprocessed_pseudogene KNOWN OTTHUMG00000156634.1 3758 232 2 ENSG00000226002.1 RP11-460N20.5 chr7 65084103 65100232 + unprocessed_pseudogene KNOWN OTTHUMG00000156632.1 16130 586 6 ENSG00000280410.1 AC104073.2 chr7 65140528 65141723 - protein_coding KNOWN NA 1196 906 3 ENSG00000164669.11 INTS4P1 chr7 65141225 65234216 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156510.4 92992 2546 24 ENSG00000224678.3 GAPDHP46 chr1 92114803 92115796 - processed_pseudogene KNOWN OTTHUMG00000010290.3 994 994 1 ENSG00000237026.1 RP11-328P23.2 chr7 65235790 65236723 - processed_pseudogene KNOWN OTTHUMG00000156728.1 934 312 2 ENSG00000229064.1 RP11-746P2.5 chr7 65247608 65247758 - processed_pseudogene KNOWN OTTHUMG00000156729.1 151 151 1 ENSG00000265175.1 AC104073.1 chr7 65263414 65263509 + miRNA NOVEL NA 96 96 1 ENSG00000277544.1 RP11-746P2.6 chr7 65290429 65292776 + unprocessed_pseudogene KNOWN OTTHUMG00000187683.2 2348 955 4 ENSG00000252102.1 SNORA63 chr7 65326719 65326816 + snoRNA NOVEL NA 98 98 1 ENSG00000200130.1 SNORA63 chr7 65327396 65327473 + snoRNA NOVEL NA 78 78 1 ENSG00000231556.1 RSL24D1P3 chr7 65335174 65335668 - processed_pseudogene KNOWN OTTHUMG00000156562.1 495 495 1 ENSG00000232906.1 RP11-746P2.3 chr7 65355934 65357176 + processed_pseudogene KNOWN OTTHUMG00000156561.1 1243 1243 1 ENSG00000146757.12 ZNF92 chr7 65373799 65401135 + protein_coding KNOWN OTTHUMG00000156557.2 27337 3512 14 ENSG00000238124.1 RP11-667F9.2 chr7 65463071 65463438 + lincRNA NOVEL OTTHUMG00000156731.1 368 164 2 ENSG00000233401.1 PRKAR1AP chr1 92125301 92126462 + processed_pseudogene KNOWN OTTHUMG00000010291.2 1162 1162 1 ENSG00000226767.1 RP11-328P23.3 chr7 65508773 65508944 - processed_pseudogene KNOWN OTTHUMG00000156744.1 172 172 1 ENSG00000235421.1 RP11-667F9.1 chr7 65525629 65554744 - unprocessed_pseudogene KNOWN OTTHUMG00000156560.2 29116 535 4 ENSG00000280427.1 AC104057.1 chr7 65554258 65555459 + protein_coding KNOWN NA 1202 903 4 ENSG00000230386.4 RP13-157F18.2 chr7 65617077 65619214 + unprocessed_pseudogene KNOWN OTTHUMG00000156730.1 2138 497 3 ENSG00000272693.2 AC073107.1 chr7 65647167 65648367 - protein_coding KNOWN NA 1201 906 3 ENSG00000273024.4 INTS4P2 chr7 65647864 65715661 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156558.6 67798 1493 21 ENSG00000228409.4 CCT6P1 chr7 65751142 65763354 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156733.1 12213 1712 35 ENSG00000206634.1 SNORA22 chr7 65755526 65755659 + snoRNA KNOWN NA 134 134 1 ENSG00000206785.1 SNORA15 chr7 65760052 65760186 + snoRNA NOVEL NA 135 135 1 ENSG00000275833.1 RP11-479O9.3 chr7 65764535 65768306 + unprocessed_pseudogene KNOWN OTTHUMG00000187684.1 3772 238 2 ENSG00000069712.10 KIAA1107 chr1 92167052 92184723 + protein_coding KNOWN OTTHUMG00000010292.3 17672 4556 9 ENSG00000224316.1 RP11-479O9.2 chr7 65773620 65802067 + unprocessed_pseudogene KNOWN OTTHUMG00000156734.1 28448 731 7 ENSG00000200670.1 RNU6-912P chr7 65814672 65814775 + snRNA KNOWN NA 104 104 1 ENSG00000236529.1 RP13-254B10.1 chr7 65840212 65840596 + processed_pseudogene KNOWN OTTHUMG00000156742.1 385 385 1 ENSG00000201560.1 RNU6-973P chr7 65859660 65859766 - snRNA KNOWN NA 107 107 1 ENSG00000196715.5 VKORC1L1 chr7 65873267 65959563 + protein_coding KNOWN OTTHUMG00000129449.3 86297 5899 5 ENSG00000169919.15 GUSB chr7 65960684 65982314 - protein_coding KNOWN OTTHUMG00000023735.4 21631 3992 80 ENSG00000224365.1 RP11-252P18.1 chr7 66004017 66004137 + processed_pseudogene KNOWN OTTHUMG00000156656.1 121 121 1 ENSG00000229886.1 RP5-1132H15.3 chr7 66025126 66031544 - processed_pseudogene KNOWN OTTHUMG00000156741.1 6419 306 3 ENSG00000252997.1 AC068533.1 chr7 66056234 66056318 - miRNA NOVEL NA 85 85 1 ENSG00000205596.4 RP5-1132H15.2 chr7 66070904 66071318 - processed_pseudogene KNOWN OTTHUMG00000156743.1 415 415 1 ENSG00000273487.1 RP4-621B10.8 chr1 92189237 92190707 + lincRNA NOVEL OTTHUMG00000186163.1 1471 1293 2 ENSG00000126522.15 ASL chr7 66075798 66093558 + protein_coding KNOWN OTTHUMG00000022876.3 17761 3195 101 ENSG00000249319.2 AC068533.7 chr7 66087761 66152277 + protein_coding PUTATIVE OTTHUMG00000160818.2 64517 922 12 ENSG00000241258.5 CRCP chr7 66114604 66154568 + protein_coding KNOWN OTTHUMG00000129519.3 39965 3540 32 ENSG00000234185.2 RP5-1132H15.1 chr7 66119603 66165011 - antisense NOVEL OTTHUMG00000156655.2 45409 404 4 ENSG00000169902.12 TPST1 chr7 66205199 66420543 + protein_coding KNOWN OTTHUMG00000023871.3 215345 2871 19 ENSG00000252126.2 RNU6-313P chr7 66344303 66344414 + snRNA KNOWN NA 112 112 1 ENSG00000179406.6 LINC00174 chr7 66376044 66401338 - lincRNA KNOWN OTTHUMG00000156590.1 25295 5627 17 ENSG00000222364.1 RNU6-96P chr7 66395191 66395286 + snRNA KNOWN NA 96 96 1 ENSG00000251451.1 GS1-124K5.6 chr7 66407288 66409239 - unprocessed_pseudogene KNOWN OTTHUMG00000156592.1 1952 301 3 ENSG00000230189.5 GS1-124K5.2 chr7 66409143 66490059 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156595.1 80917 1830 26 ENSG00000226773.1 RP4-775D17.1 chr1 92203148 92203991 + processed_pseudogene KNOWN OTTHUMG00000010286.1 844 844 1 ENSG00000231234.2 SKP1P1 chr7 66423405 66423893 - processed_pseudogene KNOWN OTTHUMG00000156598.1 489 489 1 ENSG00000236928.3 RP11-792A8.1 chr7 66434634 66435154 - processed_pseudogene KNOWN OTTHUMG00000156597.1 521 521 1 ENSG00000279785.1 GS1-124K5.13 chr7 66474556 66475749 + TEC KNOWN OTTHUMG00000188119.1 1194 1194 1 ENSG00000244510.1 GS1-124K5.7 chr7 66482801 66490108 - unprocessed_pseudogene KNOWN OTTHUMG00000156591.1 7308 151 2 ENSG00000244657.1 GS1-124K5.8 chr7 66485095 66486532 - unprocessed_pseudogene KNOWN OTTHUMG00000156594.1 1438 139 2 ENSG00000223473.2 GS1-124K5.3 chr7 66491049 66493566 - lincRNA NOVEL OTTHUMG00000156596.2 2518 1105 4 ENSG00000237310.1 GS1-124K5.4 chr7 66493706 66495474 + lincRNA NOVEL OTTHUMG00000156593.1 1769 540 4 ENSG00000179342.4 GS1-124K5.9 chr7 66505155 66506223 - processed_pseudogene KNOWN OTTHUMG00000156757.1 1069 1069 1 ENSG00000234500.1 GS1-124K5.10 chr7 66511556 66545066 + unprocessed_pseudogene KNOWN OTTHUMG00000156756.1 33511 712 8 ENSG00000229180.5 GS1-124K5.11 chr7 66526088 66542624 - lincRNA NOVEL OTTHUMG00000156754.5 16537 7429 5 ENSG00000203910.7 C1orf146 chr1 92217940 92245813 + protein_coding KNOWN OTTHUMG00000010285.3 27874 1061 13 ENSG00000275400.1 RP4-756H11.5 chr7 66553805 66554199 - processed_pseudogene KNOWN OTTHUMG00000187685.1 395 395 1 ENSG00000232559.3 GS1-124K5.12 chr7 66554588 66576923 - unprocessed_pseudogene KNOWN OTTHUMG00000156758.1 22336 579 3 ENSG00000232491.1 SAPCD2P3 chr7 66556216 66557065 + processed_pseudogene KNOWN OTTHUMG00000156755.1 850 850 1 ENSG00000177418.2 RP4-756H11.4 chr7 66556889 66557362 - processed_pseudogene KNOWN OTTHUMG00000186628.1 474 474 1 ENSG00000225573.4 RPL35P5 chr7 66606738 66607107 - processed_pseudogene KNOWN OTTHUMG00000156759.1 370 370 1 ENSG00000243335.7 KCTD7 chr7 66628881 66811187 + protein_coding KNOWN OTTHUMG00000129543.3 182307 8506 25 ENSG00000226824.5 RP4-756H11.3 chr7 66654538 66669855 + sense_intronic NOVEL OTTHUMG00000156753.1 15318 938 10 ENSG00000154710.14 RABGEF1 chr7 66682164 66811464 + protein_coding KNOWN OTTHUMG00000129547.5 129301 5646 80 ENSG00000272831.1 RP11-792A8.4 chr7 66739829 66740385 - antisense NOVEL OTTHUMG00000186261.2 557 557 1 ENSG00000271064.1 RP11-792A8.3 chr7 66748838 66749077 - processed_pseudogene KNOWN OTTHUMG00000184516.1 240 240 1 ENSG00000233125.2 ACTBP12 chr1 92228581 92229435 - transcribed_processed_pseudogene KNOWN OTTHUMG00000010284.5 855 855 2 ENSG00000230583.5 GTF2IRD1P1 chr7 66809993 66844826 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156927.2 34834 2706 18 ENSG00000232546.1 RP11-458F8.1 chr7 66848496 66858136 + unprocessed_pseudogene KNOWN OTTHUMG00000156907.1 9641 298 4 ENSG00000230295.1 RP11-458F8.2 chr7 66880708 66882981 + unprocessed_pseudogene KNOWN OTTHUMG00000156905.1 2274 351 3 ENSG00000212568.1 RNU6-1254P chr7 66891188 66891291 + snRNA KNOWN NA 104 104 1 ENSG00000273142.1 RP11-458F8.4 chr7 66902857 66906297 + lincRNA NOVEL OTTHUMG00000186265.1 3441 3441 1 ENSG00000179131.7 RP11-458F8.3 chr7 66914581 66914943 + processed_pseudogene KNOWN OTTHUMG00000156904.2 363 363 1 ENSG00000274135.1 Metazoa_SRP chr7 66915063 66915334 - misc_RNA NOVEL NA 272 272 1 ENSG00000106609.15 TMEM248 chr7 66921225 66958551 + protein_coding KNOWN OTTHUMG00000129553.5 37327 5086 29 ENSG00000275878.1 Metazoa_SRP chr7 66980120 66980410 + misc_RNA NOVEL NA 291 291 1 ENSG00000280772.1 AC079920.1 chr7 66980335 66980409 + miRNA NOVEL NA 75 75 1 ENSG00000265543.1 AL451010.1 chr1 92229256 92229339 - miRNA NOVEL NA 84 84 1 ENSG00000126524.8 SBDS chr7 66987677 66995601 - protein_coding KNOWN OTTHUMG00000023165.3 7925 1732 23 ENSG00000198874.11 TYW1 chr7 66995173 67239519 + protein_coding KNOWN OTTHUMG00000129723.3 244347 3890 65 ENSG00000233383.1 RP11-324F21.1 chr7 67089257 67089470 - processed_pseudogene KNOWN OTTHUMG00000156925.1 214 214 1 ENSG00000266525.1 MIR4650-1 chr7 67114322 67114397 - miRNA KNOWN NA 76 76 1 ENSG00000265024.1 AC073089.1 chr7 67139071 67139170 - miRNA NOVEL NA 100 100 1 ENSG00000230358.3 RP11-166O4.1 chr7 67279778 67286230 + unprocessed_pseudogene KNOWN OTTHUMG00000156921.1 6453 827 5 ENSG00000067601.7 PMS2P4 chr7 67295608 67302907 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156923.1 7300 1060 9 ENSG00000201565.1 Y_RNA chr7 67297653 67297754 - misc_RNA NOVEL NA 102 102 1 ENSG00000106610.13 STAG3L4 chr7 67302621 67321526 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156920.1 18906 2501 13 ENSG00000228019.1 RP11-166O4.4 chr7 67307605 67308356 - unprocessed_pseudogene KNOWN OTTHUMG00000156919.1 752 378 2 ENSG00000174842.15 GLMN chr1 92246402 92298987 - protein_coding KNOWN OTTHUMG00000010283.7 52586 2910 61 ENSG00000273448.1 RP11-166O4.6 chr7 67333047 67334383 + lincRNA NOVEL OTTHUMG00000186266.1 1337 1337 1 ENSG00000235475.1 LINC01372 chr7 67335976 67340024 + lincRNA NOVEL OTTHUMG00000156924.1 4049 489 3 ENSG00000265600.1 AC006480.1 chr7 67356680 67356779 + miRNA NOVEL NA 100 100 1 ENSG00000226392.1 RP4-736H5.1 chr7 67627831 67628019 + unprocessed_pseudogene KNOWN OTTHUMG00000156572.1 189 189 1 ENSG00000237466.1 RP4-736H5.2 chr7 67628022 67628349 + unprocessed_pseudogene KNOWN OTTHUMG00000156573.1 328 328 1 ENSG00000233423.1 RP4-736H5.3 chr7 67691058 67697029 - lincRNA NOVEL OTTHUMG00000156571.1 5972 575 2 ENSG00000223948.1 RP11-421N10.1 chr7 67769629 67770468 - processed_pseudogene KNOWN OTTHUMG00000156570.1 840 423 2 ENSG00000225209.1 RP11-358M3.1 chr7 68020253 68032690 + lincRNA NOVEL OTTHUMG00000156569.1 12438 510 6 ENSG00000236531.2 RP5-945F2.2 chr7 68091223 68119209 + lincRNA NOVEL OTTHUMG00000156583.2 27987 758 2 ENSG00000232975.1 RP5-945F2.1 chr7 68097737 68098250 + unprocessed_pseudogene KNOWN OTTHUMG00000156581.1 514 261 2 ENSG00000264101.1 MIR4689 chr1 5862672 5862741 - miRNA KNOWN NA 70 70 1 ENSG00000122484.8 RPAP2 chr1 92298965 92402056 + protein_coding KNOWN OTTHUMG00000010288.2 103092 17142 25 ENSG00000226829.1 RP5-945F2.3 chr7 68150283 68288233 - lincRNA NOVEL OTTHUMG00000156582.2 137951 641 5 ENSG00000237754.1 RP11-521C10.1 chr7 68241637 68242267 + processed_pseudogene KNOWN OTTHUMG00000156584.1 631 631 1 ENSG00000225959.1 MTND4P3 chr7 68266319 68266859 - unprocessed_pseudogene KNOWN OTTHUMG00000156580.2 541 541 1 ENSG00000276921.1 AC025540.1 chr7 68405619 68405723 - miRNA NOVEL NA 105 105 1 ENSG00000228429.1 RP5-859M6.1 chr7 68640798 68641584 + processed_pseudogene KNOWN OTTHUMG00000156587.2 787 787 1 ENSG00000222428.1 RNA5SP231 chr7 68723911 68724048 - rRNA KNOWN NA 138 138 1 ENSG00000233689.1 RP11-123O1.1 chr7 69040152 69046803 + lincRNA NOVEL OTTHUMG00000156611.1 6652 419 3 ENSG00000200189.1 RNU6-832P chr7 69125270 69125376 + snRNA KNOWN NA 107 107 1 ENSG00000236839.1 RP11-3P22.1 chr7 69187833 69189318 - lincRNA NOVEL OTTHUMG00000156608.1 1486 439 3 ENSG00000265655.1 AC069280.1 chr7 69190141 69190224 - miRNA NOVEL NA 84 84 1 ENSG00000242764.3 RN7SL824P chr1 92402389 92402685 - misc_RNA KNOWN NA 297 297 1 ENSG00000225718.1 RP11-3P22.2 chr7 69224696 69430923 - lincRNA NOVEL OTTHUMG00000156607.2 206228 1530 8 ENSG00000230654.1 RP11-666G4.2 chr7 69330698 69331378 - unprocessed_pseudogene KNOWN OTTHUMG00000156610.1 681 681 1 ENSG00000229031.1 RP11-666G4.1 chr7 69331835 69333633 - unprocessed_pseudogene KNOWN OTTHUMG00000156609.1 1799 1799 1 ENSG00000252423.1 RNU6-229P chr7 69401202 69401303 - snRNA KNOWN NA 102 102 1 ENSG00000200857.1 Y_RNA chr7 69507510 69507622 - misc_RNA NOVEL NA 113 113 1 ENSG00000234215.2 RP5-942I16.1 chr7 69595958 69597448 - lincRNA NOVEL OTTHUMG00000156644.2 1491 691 2 ENSG00000158321.14 AUTS2 chr7 69598919 70793068 + protein_coding KNOWN OTTHUMG00000023865.5 1194150 10420 119 ENSG00000236978.1 RP11-575M4.1 chr7 70837738 70838013 + processed_pseudogene KNOWN OTTHUMG00000156645.2 276 276 1 ENSG00000281437.1 AC073873.1 chr7 70882405 70882540 - miRNA NOVEL NA 136 136 1 ENSG00000185274.10 WBSCR17 chr7 71132169 71713600 + protein_coding KNOWN OTTHUMG00000129783.3 581432 4870 47 ENSG00000162676.10 GFI1 chr1 92474762 92486876 - protein_coding KNOWN OTTHUMG00000010897.1 12115 3301 24 ENSG00000277487.1 AC079398.3 chr7 71306592 71306698 + miRNA NOVEL NA 107 107 1 ENSG00000265878.2 MIR3914-1 chr7 71307672 71307770 - miRNA KNOWN NA 99 99 1 ENSG00000266688.1 AC079398.1 chr7 71310459 71310551 - miRNA NOVEL NA 93 93 1 ENSG00000275687.1 AC079398.2 chr7 71328207 71328303 - miRNA NOVEL NA 97 97 1 ENSG00000257902.2 AC073330.1 chr7 71617332 71617439 - miRNA NOVEL NA 108 108 1 ENSG00000199940.1 RN7SKP75 chr7 71685452 71685747 - misc_RNA KNOWN NA 296 296 1 ENSG00000183166.9 CALN1 chr7 71779491 72447151 - protein_coding KNOWN OTTHUMG00000023787.8 667661 10032 32 ENSG00000201014.1 RNA5SP232 chr7 71913738 71913856 - rRNA KNOWN NA 119 119 1 ENSG00000235581.1 GS1-111G14.1 chr7 71942259 71942468 + processed_pseudogene KNOWN OTTHUMG00000156670.2 210 210 1 ENSG00000228769.1 ABCF2P2 chr7 72103181 72104209 + unprocessed_pseudogene KNOWN OTTHUMG00000156669.1 1029 296 2 ENSG00000067208.13 EVI5 chr1 92508696 92792404 - protein_coding KNOWN OTTHUMG00000010895.3 283709 8276 66 ENSG00000277149.3 TYW1B chr7 72558744 72828198 - protein_coding KNOWN OTTHUMG00000157067.4 269455 3258 34 ENSG00000266772.1 AC211469.1 chr7 72673068 72673167 + miRNA NOVEL NA 100 100 1 ENSG00000264494.1 MIR4650-2 chr7 72697903 72697978 + miRNA KNOWN NA 76 76 1 ENSG00000270694.1 RP11-535E8.2 chr7 72722885 72723089 + processed_pseudogene KNOWN OTTHUMG00000184450.2 205 205 1 ENSG00000270555.1 RP11-1394O16.1 chr7 72768798 72769191 + processed_pseudogene KNOWN OTTHUMG00000184448.2 394 394 1 ENSG00000266569.2 RN7SL377P chr7 72822894 72823171 - misc_RNA KNOWN NA 278 278 1 ENSG00000225648.4 SBDSP1 chr7 72829425 72836701 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000157063.3 7277 1239 20 ENSG00000274656.1 Metazoa_SRP chr7 72841437 72841727 - misc_RNA NOVEL NA 291 291 1 ENSG00000179994.9 SPDYE7P chr7 72862757 72870510 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000150526.1 7754 1262 12 ENSG00000196313.10 POM121 chr7 72879365 72951440 + protein_coding KNOWN OTTHUMG00000023527.4 72076 9822 70 ENSG00000223787.2 RP4-593M8.1 chr1 92580476 92580821 - processed_pseudogene KNOWN OTTHUMG00000010896.2 346 346 1 ENSG00000272843.1 RP11-313P13.5 chr7 72924418 72925125 - antisense NOVEL OTTHUMG00000186270.1 708 708 1 ENSG00000106133.16 NSUN5P2 chr7 72947581 72954790 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000129829.6 7210 2576 46 ENSG00000155428.11 TRIM74 chr7 72959485 72969466 - protein_coding KNOWN OTTHUMG00000129851.1 9982 1471 10 ENSG00000174353.16 STAG3L3 chr7 72969696 73005922 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000157064.4 36227 3644 45 ENSG00000205584.6 AC005488.11 chr7 72969814 72971727 + unprocessed_pseudogene KNOWN OTTHUMG00000150519.1 1914 468 4 ENSG00000276178.1 Y_RNA chr7 72983360 72983461 - misc_RNA NOVEL NA 102 102 1 ENSG00000229018.5 RP11-313P13.3 chr7 73005541 73021103 + unprocessed_pseudogene KNOWN OTTHUMG00000157065.3 15563 1336 7 ENSG00000201282.1 Y_RNA chr7 73011144 73011245 + misc_RNA NOVEL NA 102 102 1 ENSG00000273520.3 SPDYE8P chr7 73020338 73029766 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000188238.2 9429 2281 13 ENSG00000273897.1 CH17-264B6.4 chr7 73037371 73049246 + unprocessed_pseudogene KNOWN OTTHUMG00000188239.1 11876 715 6 ENSG00000229992.1 HMGB3P9 chr1 92647048 92647630 - processed_pseudogene KNOWN OTTHUMG00000010900.1 583 583 1 ENSG00000273927.1 Y_RNA chr7 73039085 73039186 + misc_RNA NOVEL NA 102 102 1 ENSG00000275976.3 CH17-264B6.1 chr7 73048055 73057911 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000188240.2 9857 2984 18 ENSG00000277125.1 CH17-264B6.3 chr7 73065529 73077353 + unprocessed_pseudogene KNOWN OTTHUMG00000188241.1 11825 699 6 ENSG00000274984.1 Y_RNA chr7 73067231 73067332 + misc_RNA NOVEL NA 102 102 1 ENSG00000273626.1 AC211476.1 chr7 73068571 73068634 - miRNA NOVEL NA 64 64 1 ENSG00000262461.4 SPDYE9P chr7 73076165 73086038 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000150524.3 9874 2948 19 ENSG00000174384.9 RP11-313P13.4 chr7 73093657 73105389 + unprocessed_pseudogene KNOWN OTTHUMG00000157066.2 11733 710 6 ENSG00000199913.1 Y_RNA chr7 73095357 73095458 + misc_RNA NOVEL NA 102 102 1 ENSG00000274570.3 AC006995.8 chr7 73104201 73111140 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000150525.3 6940 2240 10 ENSG00000233369.6 RP11-396K3.1 chr7 73154938 73207283 + transcribed_processed_pseudogene KNOWN OTTHUMG00000156702.3 52346 3609 46 ENSG00000201317.1 RNU4-59P chr1 92700819 92700934 - snRNA KNOWN NA 116 116 1 ENSG00000233523.1 PHBP5 chr7 73187969 73188736 - processed_pseudogene KNOWN OTTHUMG00000156703.1 768 768 1 ENSG00000182487.11 NCF1B chr7 73220624 73235945 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156804.1 15322 1902 25 ENSG00000214544.6 GTF2IRD2P1 chr7 73242751 73280119 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156803.4 37369 3528 37 ENSG00000205578.5 POM121B chr7 73293497 73301161 + unprocessed_pseudogene KNOWN OTTHUMG00000156802.2 7665 2487 8 ENSG00000130305.15 NSUN5 chr7 73302517 73308867 - protein_coding KNOWN OTTHUMG00000129869.3 6351 3414 53 ENSG00000146755.9 TRIM50 chr7 73312539 73328082 - protein_coding KNOWN OTTHUMG00000156805.2 15544 2490 19 ENSG00000225005.1 RP11-483G21.3 chr7 73314107 73315213 + processed_pseudogene KNOWN OTTHUMG00000156801.2 1107 1107 1 ENSG00000077800.10 FKBP6 chr7 73328164 73358637 + protein_coding KNOWN OTTHUMG00000150520.10 30474 2469 51 ENSG00000206709.1 RNU6-1080P chr7 73339094 73339200 - snRNA KNOWN NA 107 107 1 ENSG00000202035.1 Y_RNA chr7 73403788 73403889 - misc_RNA NOVEL NA 102 102 1 ENSG00000225505.1 RP11-330C7.3 chr1 92732000 92733257 + processed_pseudogene KNOWN OTTHUMG00000010901.1 1258 797 2 ENSG00000188763.4 FZD9 chr7 73433783 73436120 + protein_coding KNOWN OTTHUMG00000023051.2 2338 2338 1 ENSG00000009954.9 BAZ1B chr7 73440398 73522278 - protein_coding KNOWN OTTHUMG00000023847.5 81881 7053 42 ENSG00000252713.1 RNU6-1198P chr7 73507208 73507274 + snRNA KNOWN NA 67 67 1 ENSG00000106635.6 BCL7B chr7 73536356 73558002 - protein_coding KNOWN OTTHUMG00000023412.4 21647 3542 64 ENSG00000106638.14 TBL2 chr7 73568932 73578791 - protein_coding KNOWN OTTHUMG00000023427.6 9860 5067 114 ENSG00000009950.14 MLXIPL chr7 73593194 73624543 - protein_coding KNOWN OTTHUMG00000129995.6 31350 4815 121 ENSG00000274080.1 CTA-315H11.2 chr7 73609262 73611502 - sense_intronic NOVEL OTTHUMG00000188576.1 2241 2241 1 ENSG00000176428.5 VPS37D chr7 73667825 73672112 + protein_coding KNOWN OTTHUMG00000157227.1 4288 1626 6 ENSG00000176410.7 DNAJC30 chr7 73680969 73683453 - protein_coding KNOWN OTTHUMG00000023290.3 2485 2485 1 ENSG00000071462.10 WBSCR22 chr7 73683025 73705161 + protein_coding KNOWN OTTHUMG00000023306.4 22137 7944 136 ENSG00000234202.2 RP11-330C7.4 chr1 92749175 92749330 - processed_pseudogene KNOWN OTTHUMG00000010893.2 156 156 1 ENSG00000106089.10 STX1A chr7 73699206 73719672 - protein_coding KNOWN OTTHUMG00000137422.2 20467 3693 82 ENSG00000265724.1 MIR4284 chr7 73711317 73711397 + miRNA KNOWN NA 81 81 1 ENSG00000241709.3 RN7SL265P chr7 73732569 73732868 - misc_RNA KNOWN NA 300 300 1 ENSG00000225969.1 ABHD11-AS1 chr7 73735038 73736054 + antisense KNOWN OTTHUMG00000153263.1 1017 558 4 ENSG00000106077.17 ABHD11 chr7 73736094 73738867 - protein_coding KNOWN OTTHUMG00000130029.3 2774 2289 61 ENSG00000165215.6 CLDN3 chr7 73768997 73770270 - protein_coding KNOWN OTTHUMG00000023424.2 1274 1274 1 ENSG00000189143.9 CLDN4 chr7 73799542 73832693 + protein_coding KNOWN OTTHUMG00000023425.4 33152 4702 11 ENSG00000165171.9 WBSCR27 chr7 73834590 73842535 - protein_coding KNOWN OTTHUMG00000130033.2 7946 1469 15 ENSG00000175877.3 WBSCR28 chr7 73861159 73865893 + protein_coding KNOWN OTTHUMG00000157243.1 4735 977 7 ENSG00000261467.2 RP11-731K22.1 chr7 73985992 73988767 + lincRNA NOVEL OTTHUMG00000173182.1 2776 2776 1 ENSG00000223896.2 CCNJP2 chr1 92755794 92756956 + processed_pseudogene KNOWN OTTHUMG00000010898.3 1163 1163 1 ENSG00000049540.15 ELN chr7 74027789 74069907 + protein_coding KNOWN OTTHUMG00000150229.12 42119 6542 603 ENSG00000232415.1 CTB-51J22.1 chr7 74059576 74062284 - antisense NOVEL OTTHUMG00000157272.1 2709 532 2 ENSG00000106683.13 LIMK1 chr7 74082933 74122525 + protein_coding KNOWN OTTHUMG00000023448.5 39593 6902 81 ENSG00000106682.13 EIF4H chr7 74174245 74197101 + protein_coding KNOWN OTTHUMG00000023025.4 22857 3191 26 ENSG00000207741.1 MIR590 chr7 74191198 74191294 + miRNA KNOWN NA 97 97 1 ENSG00000086730.15 LAT2 chr7 74199652 74229834 + protein_coding KNOWN OTTHUMG00000130151.9 30183 4545 104 ENSG00000049541.9 RFC2 chr7 74231499 74254458 - protein_coding KNOWN OTTHUMG00000023239.7 22960 2211 106 ENSG00000106665.14 CLIP2 chr7 74289475 74405943 + protein_coding KNOWN OTTHUMG00000022980.3 116469 7315 66 ENSG00000006704.9 GTF2IRD1 chr7 74453790 74602604 + protein_coding KNOWN OTTHUMG00000023782.3 148815 6498 139 ENSG00000280743.1 Metazoa_SRP chr7 74486691 74486955 + misc_RNA NOVEL NA 265 265 1 ENSG00000131697.16 NPHP4 chr1 5862811 5992473 - protein_coding KNOWN OTTHUMG00000000701.6 129663 13167 155 ENSG00000122406.11 RPL5 chr1 92832025 92841924 + protein_coding KNOWN OTTHUMG00000010899.4 9900 2890 26 ENSG00000238391.1 RNA5SP233 chr7 74487428 74487540 - rRNA KNOWN NA 113 113 1 ENSG00000273069.1 RP5-1186P10.2 chr7 74606913 74607299 + lincRNA NOVEL OTTHUMG00000186274.1 387 387 1 ENSG00000279005.1 RP5-1186P10.1 chr7 74633510 74633884 - TEC KNOWN OTTHUMG00000173280.2 375 375 1 ENSG00000263001.4 GTF2I chr7 74657667 74760692 + protein_coding KNOWN OTTHUMG00000156237.5 103026 10438 208 ENSG00000232729.6 AC083884.8 chr7 74688939 74729001 - processed_transcript NOVEL OTTHUMG00000156239.5 40063 2847 18 ENSG00000262648.1 AC083884.7 chr7 74741457 74742121 - processed_pseudogene KNOWN OTTHUMG00000188290.1 665 665 1 ENSG00000158517.12 NCF1 chr7 74773962 74789315 + protein_coding KNOWN OTTHUMG00000149965.11 15354 3462 66 ENSG00000196275.12 GTF2IRD2 chr7 74796144 74851551 - protein_coding KNOWN OTTHUMG00000181527.3 55408 7549 52 ENSG00000277072.3 STAG3L2 chr7 74882163 74890610 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156216.5 8448 2694 37 ENSG00000123965.13 PMS2P5 chr7 74894116 74897835 + unprocessed_pseudogene KNOWN OTTHUMG00000156014.4 3720 516 4 ENSG00000154511.10 FAM69A chr1 92832737 92961522 - protein_coding KNOWN OTTHUMG00000010894.2 128786 3091 23 ENSG00000239069.1 Y_RNA chr7 74895816 74895917 + misc_RNA NOVEL NA 102 102 1 ENSG00000184616.8 AC004166.6 chr7 74906673 74913256 - unprocessed_pseudogene KNOWN OTTHUMG00000156994.2 6584 771 6 ENSG00000274070.1 GATSL2 chr7 74964818 75024798 + protein_coding KNOWN OTTHUMG00000181541.2 59981 1363 15 ENSG00000274523.3 WBSCR16 chr7 75027122 75074228 - protein_coding KNOWN OTTHUMG00000130373.4 47107 4196 53 ENSG00000277127.1 Metazoa_SRP chr7 75057877 75058188 + misc_RNA NOVEL NA 312 312 1 ENSG00000174428.15 GTF2IRD2B chr7 75092573 75149817 + protein_coding KNOWN OTTHUMG00000181534.2 57245 5672 93 ENSG00000165178.9 NCF1C chr7 75156639 75172044 - unprocessed_pseudogene KNOWN OTTHUMG00000149964.4 15406 1427 11 ENSG00000277053.3 GTF2IP1 chr7 75185385 75237696 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000181536.2 52312 7453 96 ENSG00000276592.1 AC138783.10 chr7 75203926 75204711 + processed_pseudogene KNOWN OTTHUMG00000188296.1 786 786 1 ENSG00000277675.1 AC004878.2 chr7 75225433 75234310 + antisense NOVEL OTTHUMG00000165163.2 8878 775 3 ENSG00000206680.1 SNORD21 chr1 92837289 92837383 + snoRNA KNOWN NA 95 95 1 ENSG00000263081.1 AC004878.8 chr7 75232928 75233924 + antisense NOVEL OTTHUMG00000162597.2 997 280 2 ENSG00000275121.1 CH17-232I21.1 chr7 75237293 75237405 - processed_pseudogene KNOWN OTTHUMG00000182945.1 113 113 1 ENSG00000274959.1 CH17-52D20.1 chr7 75281267 75287118 + unprocessed_pseudogene KNOWN OTTHUMG00000182946.2 5852 798 7 ENSG00000276840.1 PMS2P10 chr7 75288120 75299795 - unprocessed_pseudogene KNOWN OTTHUMG00000182947.2 11676 612 5 ENSG00000267828.1 Y_RNA chr7 75297990 75298091 - misc_RNA NOVEL NA 102 102 1 ENSG00000278807.1 CH17-52D20.2 chr7 75309144 75315046 + unprocessed_pseudogene KNOWN OTTHUMG00000182948.2 5903 822 6 ENSG00000273598.1 PMS2P6 chr7 75316048 75327765 - unprocessed_pseudogene KNOWN OTTHUMG00000182949.2 11718 621 5 ENSG00000202021.1 Y_RNA chr7 75325959 75326060 - misc_RNA NOVEL NA 102 102 1 ENSG00000278080.1 CH17-52D20.3 chr7 75337162 75343013 + unprocessed_pseudogene KNOWN OTTHUMG00000182950.1 5852 909 7 ENSG00000278416.1 PMS2L2 chr7 75344015 75359550 - unprocessed_pseudogene KNOWN OTTHUMG00000182951.2 15536 1128 7 ENSG00000207523.1 SNORA66 chr1 92840719 92840851 + snoRNA KNOWN NA 133 133 1 ENSG00000199870.1 Y_RNA chr7 75353885 75353986 - misc_RNA NOVEL NA 102 102 1 ENSG00000205583.12 STAG3L1 chr7 75359194 75395383 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155940.8 36190 2094 22 ENSG00000275930.1 Y_RNA chr7 75381638 75381739 + misc_RNA NOVEL NA 102 102 1 ENSG00000146722.10 AC006014.8 chr7 75391955 75395434 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000150518.2 3480 1122 9 ENSG00000178809.10 TRIM73 chr7 75395063 75410996 + protein_coding KNOWN OTTHUMG00000156075.7 15934 5544 30 ENSG00000223705.8 NSUN5P1 chr7 75410322 75416787 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156108.10 6466 4822 49 ENSG00000272391.4 POM121C chr7 75416787 75486271 - protein_coding KNOWN OTTHUMG00000156238.9 69485 8767 53 ENSG00000242073.2 AC006014.7 chr7 75474707 75486108 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156219.3 11402 523 4 ENSG00000170092.13 SPDYE5 chr7 75493625 75504304 + protein_coding KNOWN OTTHUMG00000156138.6 10680 3325 23 ENSG00000127957.15 PMS2P3 chr7 75502930 75528148 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156049.44 25219 1727 58 ENSG00000207022.1 SNORA51 chr1 92846059 92846182 + snoRNA NOVEL NA 124 124 1 ENSG00000200874.1 Y_RNA chr7 75513025 75513126 - misc_RNA NOVEL NA 102 102 1 ENSG00000127946.15 HIP1 chr7 75533300 75738962 - protein_coding KNOWN OTTHUMG00000156050.4 205663 8953 107 ENSG00000279996.1 CTB-139P11.2 chr7 75625089 75626970 - TEC KNOWN OTTHUMG00000188597.1 1882 1882 1 ENSG00000006606.7 CCL26 chr7 75769533 75789896 - protein_coding KNOWN OTTHUMG00000130403.2 20364 706 7 ENSG00000106178.5 CCL24 chr7 75811665 75823356 - protein_coding KNOWN OTTHUMG00000156635.1 11692 617 7 ENSG00000219039.2 AC005102.1 chr7 75835663 75836141 + processed_pseudogene KNOWN OTTHUMG00000156319.1 479 479 1 ENSG00000005486.15 RHBDD2 chr7 75842602 75888926 + protein_coding KNOWN OTTHUMG00000156435.4 46325 2441 30 ENSG00000127948.12 POR chr7 75899200 75986855 + protein_coding KNOWN OTTHUMG00000130413.32 87656 6112 155 ENSG00000265020.1 MIR4651 chr7 75915197 75915269 + miRNA KNOWN NA 73 73 1 ENSG00000235090.1 RPL7L1P3 chr7 75922755 75923443 + processed_pseudogene KNOWN OTTHUMG00000156434.1 689 689 1 ENSG00000229052.2 RP11-386I23.1 chr1 92930696 92934098 + transcribed_processed_pseudogene KNOWN OTTHUMG00000010903.2 3403 3403 3 ENSG00000201643.1 SNORA14A chr7 75943782 75943916 + snoRNA KNOWN NA 135 135 1 ENSG00000189077.9 TMEM120A chr7 75986837 75994659 - protein_coding KNOWN OTTHUMG00000156620.7 7823 1997 97 ENSG00000127952.15 STYXL1 chr7 75996338 76048004 - protein_coding KNOWN OTTHUMG00000130459.3 51667 2028 77 ENSG00000280388.1 RP11-229D13.3 chr7 76043977 76045963 - TEC KNOWN OTTHUMG00000188599.1 1987 1987 1 ENSG00000146701.10 MDH2 chr7 76048051 76067508 + protein_coding KNOWN OTTHUMG00000023827.6 19458 3641 40 ENSG00000230882.1 AC005077.14 chr7 76071469 76074963 - processed_pseudogene KNOWN OTTHUMG00000156621.2 3495 3495 1 ENSG00000251798.1 RNU6-863P chr7 76087444 76087547 + snRNA KNOWN NA 104 104 1 ENSG00000227038.2 AC005077.12 chr7 76090431 76108779 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156626.2 18349 2576 9 ENSG00000241778.1 AC005077.9 chr7 76108434 76108763 - unprocessed_pseudogene KNOWN OTTHUMG00000156625.1 330 126 2 ENSG00000213549.3 AC005077.8 chr7 76113026 76113400 - processed_pseudogene KNOWN OTTHUMG00000156623.1 375 375 1 ENSG00000252121.1 RNU6-970P chr1 92969604 92969710 - snRNA KNOWN NA 107 107 1 ENSG00000224273.1 AC005077.7 chr7 76117725 76132187 - unprocessed_pseudogene KNOWN OTTHUMG00000156622.1 14463 631 4 ENSG00000228829.1 AC005077.5 chr7 76173733 76177205 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156436.3 3473 370 6 ENSG00000177679.15 SRRM3 chr7 76201900 76287288 + protein_coding KNOWN OTTHUMG00000130489.5 85389 6873 26 ENSG00000106211.8 HSPB1 chr7 76302544 76304295 + protein_coding KNOWN OTTHUMG00000023228.3 1752 1634 8 ENSG00000170027.6 YWHAG chr7 76326794 76359031 - protein_coding KNOWN OTTHUMG00000022862.3 32238 3750 2 ENSG00000213548.3 AC005522.6 chr7 76361768 76362113 + processed_pseudogene KNOWN OTTHUMG00000155726.1 346 346 1 ENSG00000146700.8 SSC4D chr7 76389334 76409695 - protein_coding KNOWN OTTHUMG00000022864.7 20362 2819 14 ENSG00000188372.13 ZP3 chr7 76397518 76442071 + protein_coding KNOWN OTTHUMG00000130575.3 44554 2716 39 ENSG00000091073.18 DTX2 chr7 76461676 76505995 + protein_coding KNOWN OTTHUMG00000162594.2 44320 5042 110 ENSG00000233980.1 FDPSP2 chr7 76470162 76471058 - processed_pseudogene KNOWN OTTHUMG00000155850.1 897 897 1 ENSG00000239710.3 RN7SL692P chr1 92974827 92975114 - misc_RNA KNOWN NA 288 288 1 ENSG00000250614.1 AC007078.4 chr7 76474587 76478856 - antisense NOVEL OTTHUMG00000022872.7 4270 453 2 ENSG00000243566.5 UPK3B chr7 76510428 76516521 + protein_coding KNOWN OTTHUMG00000149929.3 6094 2660 20 ENSG00000250778.1 AC004980.8 chr7 76521611 76522074 + unprocessed_pseudogene KNOWN OTTHUMG00000155723.2 464 203 2 ENSG00000238560.1 Y_RNA chr7 76523605 76523706 + misc_RNA NOVEL NA 102 102 1 ENSG00000230305.2 AC004980.9 chr7 76524515 76532692 + unprocessed_pseudogene KNOWN OTTHUMG00000155727.2 8178 365 3 ENSG00000185040.12 AC004980.11 chr7 76533703 76540390 - unprocessed_pseudogene KNOWN OTTHUMG00000155814.1 6688 855 7 ENSG00000205485.12 AC004980.7 chr7 76549360 76627982 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155724.2 78623 3110 12 ENSG00000146707.13 POMZP3 chr7 76609986 76627261 - protein_coding KNOWN OTTHUMG00000023514.22 17276 1861 28 ENSG00000214243.3 AC004980.10 chr7 76650401 76650897 - processed_pseudogene KNOWN OTTHUMG00000155815.1 497 497 1 ENSG00000221249.1 AC004980.1 chr7 76697502 76697654 - miRNA NOVEL NA 153 153 1 ENSG00000252752.1 RNU6-210P chr1 93010257 93010351 + snRNA KNOWN NA 95 95 1 ENSG00000231183.3 AC007003.1 chr7 76902491 76919191 + processed_transcript NOVEL OTTHUMG00000155614.2 16701 971 4 ENSG00000231087.2 FDPSP7 chr7 76968197 76969250 - processed_pseudogene KNOWN OTTHUMG00000155799.1 1054 1054 1 ENSG00000236280.1 AC114737.3 chr7 76968346 76968518 + processed_pseudogene KNOWN OTTHUMG00000156642.1 173 173 1 ENSG00000225703.1 AC005522.7 chr7 76972679 76976961 - lincRNA NOVEL OTTHUMG00000155798.1 4283 453 2 ENSG00000186704.9 DTX2P1 chr7 76978617 77004308 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155661.2 25692 1633 8 ENSG00000265479.4 DTX2P1-UPK3BP1-PMS2P11 chr7 76980949 77043775 + processed_transcript NOVEL OTTHUMG00000179528.2 62827 2043 20 ENSG00000242435.1 UPK3BP1 chr7 77004662 77005774 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155728.1 1113 509 2 ENSG00000241350.1 PMS2P11 chr7 77011551 77015853 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155730.1 4303 574 5 ENSG00000201885.1 Y_RNA chr7 77013583 77013684 + misc_RNA NOVEL NA 102 102 1 ENSG00000186645.7 AC114737.6 chr7 77024691 77030572 - unprocessed_pseudogene KNOWN OTTHUMG00000155797.1 5882 783 6 ENSG00000222664.1 RN7SKP123 chr1 93026252 93026542 + misc_RNA KNOWN NA 291 291 1 ENSG00000233448.2 PMS2P9 chr7 77039944 77043776 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155739.1 3833 515 4 ENSG00000201959.1 Y_RNA chr7 77041647 77041748 + misc_RNA NOVEL NA 102 102 1 ENSG00000259628.1 RP11-467H10.2 chr7 77043721 77198626 + processed_transcript NOVEL OTTHUMG00000186397.1 154906 617 3 ENSG00000205482.8 AC007000.12 chr7 77052785 77059440 - unprocessed_pseudogene KNOWN OTTHUMG00000155796.1 6656 855 7 ENSG00000237815.1 AC007000.11 chr7 77060345 77060479 - processed_pseudogene KNOWN OTTHUMG00000155800.1 135 135 1 ENSG00000225726.1 AC007000.10 chr7 77071751 77072237 - processed_pseudogene KNOWN OTTHUMG00000155783.1 487 487 1 ENSG00000214439.3 FAM185BP chr7 77083886 77122116 - unprocessed_pseudogene KNOWN OTTHUMG00000154141.1 38231 716 6 ENSG00000213542.3 RP11-467H10.1 chr7 77115399 77116192 - processed_pseudogene KNOWN OTTHUMG00000157250.1 794 794 1 ENSG00000135205.13 CCDC146 chr7 77122434 77329533 + protein_coding KNOWN OTTHUMG00000162595.1 207100 4457 56 ENSG00000127951.5 FGL2 chr7 77193371 77199826 - protein_coding KNOWN OTTHUMG00000130681.1 6456 4261 2 ENSG00000266687.1 AL356261.1 chr1 5893839 5893924 - miRNA NOVEL NA 86 86 1 ENSG00000251837.1 Y_RNA chr1 93027410 93027506 - misc_RNA NOVEL NA 97 97 1 ENSG00000250990.1 AC073635.5 chr7 77246340 77258123 - antisense NOVEL OTTHUMG00000155740.16 11784 570 4 ENSG00000186088.14 GSAP chr7 77310751 77416400 - protein_coding KNOWN OTTHUMG00000150504.5 105650 9001 123 ENSG00000273341.1 RP5-899E9.1 chr7 77416673 77425443 + lincRNA NOVEL OTTHUMG00000186279.1 8771 733 5 ENSG00000237620.1 GCNT1P5 chr7 77461458 77462139 + processed_pseudogene KNOWN OTTHUMG00000155782.1 682 682 1 ENSG00000127947.14 PTPN12 chr7 77537275 77640071 + protein_coding KNOWN OTTHUMG00000023501.8 102797 5547 113 ENSG00000214293.7 APTR chr7 77657660 77696265 - lincRNA NOVEL OTTHUMG00000162596.1 38606 3100 14 ENSG00000187257.13 RSBN1L chr7 77696443 77783022 + protein_coding KNOWN OTTHUMG00000155517.6 86580 7206 41 ENSG00000135211.5 TMEM60 chr7 77793728 77798580 - protein_coding KNOWN OTTHUMG00000130689.2 4853 1023 2 ENSG00000006576.15 PHTF2 chr7 77798792 77957503 + protein_coding KNOWN OTTHUMG00000155557.3 158712 8646 144 ENSG00000222432.1 Y_RNA chr7 77895880 77895992 + misc_RNA NOVEL NA 113 113 1 ENSG00000143033.16 MTF2 chr1 93079235 93139081 + protein_coding KNOWN OTTHUMG00000010161.7 59847 5909 137 ENSG00000232756.1 RP5-1185I7.1 chr7 77990384 77995171 + antisense NOVEL OTTHUMG00000156495.1 4788 2298 7 ENSG00000187391.16 MAGI2 chr7 78017057 79453574 - protein_coding KNOWN OTTHUMG00000130697.12 1436518 10089 213 ENSG00000281008.1 RP4-587D13.1 chr7 78134079 78134851 + TEC KNOWN OTTHUMG00000189690.1 773 773 1 ENSG00000280958.1 RP4-587D13.2 chr7 78170195 78170915 + TEC KNOWN OTTHUMG00000189691.1 721 721 1 ENSG00000231322.4 RPL13AP17 chr7 78347142 78359458 + transcribed_processed_pseudogene KNOWN OTTHUMG00000155514.2 12317 2170 12 ENSG00000226230.1 AC007237.2 chr7 78486530 78487028 + processed_pseudogene KNOWN OTTHUMG00000155515.1 499 499 1 ENSG00000235751.3 MAGI2-IT1 chr7 78901275 79000298 - sense_intronic NOVEL OTTHUMG00000162682.1 99024 574 4 ENSG00000251276.1 MAGI2-AS1 chr7 78939850 78940895 + antisense NOVEL OTTHUMG00000155510.1 1046 472 2 ENSG00000226978.1 MAGI2-AS2 chr7 79008988 79012277 + antisense NOVEL OTTHUMG00000155511.2 3290 476 3 ENSG00000212545.1 RNU6-337P chr7 79030240 79030345 + snRNA KNOWN NA 106 106 1 ENSG00000117500.11 TMED5 chr1 93149742 93180728 - protein_coding KNOWN OTTHUMG00000010162.4 30987 9423 20 ENSG00000229110.1 AC006355.3 chr7 79124739 79125750 + processed_pseudogene KNOWN OTTHUMG00000155513.2 1012 1012 1 ENSG00000281120.1 RP5-1093G23.1 chr7 79139829 79177210 + antisense NOVEL OTTHUMG00000189692.1 37382 317 3 ENSG00000212482.1 RNU6-530P chr7 79343266 79343372 - snRNA KNOWN NA 107 107 1 ENSG00000222024.2 AC004945.1 chr7 79353410 79354392 + processed_pseudogene KNOWN OTTHUMG00000155464.1 983 983 1 ENSG00000234456.6 MAGI2-AS3 chr7 79452877 79471208 + processed_transcript NOVEL OTTHUMG00000155465.4 18332 11625 89 ENSG00000226285.1 AC091813.2 chr7 79543911 79544853 - processed_pseudogene KNOWN OTTHUMG00000155463.1 943 943 1 ENSG00000200786.1 RNA5SP234 chr7 79654109 79654227 + rRNA KNOWN NA 119 119 1 ENSG00000206818.1 RNU6-849P chr7 79912104 79912208 - snRNA KNOWN NA 105 105 1 ENSG00000230853.1 AC004159.1 chr7 80096600 80097215 - processed_pseudogene KNOWN OTTHUMG00000156444.1 616 616 1 ENSG00000127955.14 GNAI1 chr7 80133955 80219402 + protein_coding KNOWN OTTHUMG00000023523.9 85448 4547 32 ENSG00000122483.16 CCDC18 chr1 93179919 93278730 + protein_coding KNOWN OTTHUMG00000010598.5 98812 5633 134 ENSG00000244392.3 RN7SL869P chr7 80245926 80246225 + misc_RNA KNOWN NA 300 300 1 ENSG00000234223.2 AC003988.1 chr7 80246409 80312456 - lincRNA NOVEL OTTHUMG00000156443.2 66048 578 5 ENSG00000232667.8 AC004862.6 chr7 80312574 80391474 - antisense NOVEL OTTHUMG00000155382.7 78901 3819 90 ENSG00000240347.3 RN7SL35P chr7 80318253 80318544 + misc_RNA KNOWN NA 292 292 1 ENSG00000135218.16 CD36 chr7 80369575 80679277 + protein_coding KNOWN OTTHUMG00000155383.20 309703 10115 188 ENSG00000223550.1 SNRPBP1 chr7 80377554 80377835 - processed_pseudogene KNOWN OTTHUMG00000155381.1 282 282 1 ENSG00000214415.3 GNAT3 chr7 80458671 80512020 - protein_coding KNOWN OTTHUMG00000155401.3 53350 1159 8 ENSG00000229436.1 AC073850.6 chr7 80662331 80662585 - processed_pseudogene KNOWN OTTHUMG00000156433.1 255 255 1 ENSG00000075223.12 SEMA3C chr7 80742538 80922359 - protein_coding KNOWN OTTHUMG00000023447.5 179822 6268 65 ENSG00000279326.1 RP5-1136A10.1 chr7 80972516 80974724 - TEC KNOWN OTTHUMG00000173137.1 2209 2209 1 ENSG00000237003.1 RP4-612C19.1 chr1 93190740 93191060 - processed_pseudogene KNOWN OTTHUMG00000010600.1 321 321 1 ENSG00000237896.5 AC005008.2 chr7 81175508 81199115 + lincRNA NOVEL OTTHUMG00000156705.2 23608 942 8 ENSG00000226671.1 AC005008.3 chr7 81191398 81192009 + processed_pseudogene KNOWN OTTHUMG00000156704.1 612 612 1 ENSG00000273949.1 AC004541.1 chr7 81294538 81294621 - miRNA NOVEL NA 84 84 1 ENSG00000223514.1 AC004866.1 chr7 81335106 81335183 + processed_pseudogene KNOWN OTTHUMG00000156706.1 78 78 1 ENSG00000224134.1 AC004866.3 chr7 81431731 81432796 + unprocessed_pseudogene KNOWN OTTHUMG00000155402.2 1066 481 3 ENSG00000232968.1 EIF4EP4 chr7 81463036 81463613 - processed_pseudogene KNOWN OTTHUMG00000155411.1 578 578 1 ENSG00000234113.2 AC008163.4 chr7 81528403 81561783 - lincRNA NOVEL OTTHUMG00000155412.4 33381 612 4 ENSG00000233491.5 AC010091.1 chr7 81576386 81626216 - lincRNA NOVEL OTTHUMG00000155403.3 49831 4712 19 ENSG00000230196.1 DDX43P3 chr7 81610884 81611326 - processed_pseudogene KNOWN OTTHUMG00000155404.1 443 443 1 ENSG00000019991.14 HGF chr7 81699006 81770438 - protein_coding KNOWN OTTHUMG00000023804.6 71433 8897 79 ENSG00000225297.1 RP4-612C19.2 chr1 93199755 93199939 - processed_pseudogene KNOWN OTTHUMG00000010601.1 185 185 1 ENSG00000263416.1 AC006145.1 chr7 81920203 81920270 - miRNA NOVEL NA 68 68 1 ENSG00000153956.14 CACNA2D1 chr7 81946444 82443798 - protein_coding KNOWN OTTHUMG00000023622.10 497355 9010 139 ENSG00000223770.4 AC006145.4 chr7 82009177 82029955 + antisense NOVEL OTTHUMG00000154779.1 20779 2651 9 ENSG00000221262.1 AC005159.1 chr7 82290077 82290162 + miRNA NOVEL NA 86 86 1 ENSG00000213530.3 MTHFD2P5 chr7 82589848 82590691 - processed_pseudogene KNOWN OTTHUMG00000154816.2 844 844 1 ENSG00000228711.1 AC004006.2 chr7 82657035 82657411 + processed_pseudogene KNOWN OTTHUMG00000154815.3 377 377 1 ENSG00000186472.18 PCLO chr7 82754013 83162930 - protein_coding KNOWN OTTHUMG00000154853.14 408918 22873 86 ENSG00000202281.1 RNA5SP235 chr7 83017898 83018011 + rRNA KNOWN NA 114 114 1 ENSG00000235503.2 AC079799.2 chr7 83355154 83362266 + antisense NOVEL OTTHUMG00000154683.2 7113 331 2 ENSG00000170381.11 SEMA3E chr7 83363906 83649010 - protein_coding KNOWN OTTHUMG00000154693.4 285105 6748 43 ENSG00000223745.6 RP4-717I23.3 chr1 93262186 93346025 - processed_transcript NOVEL OTTHUMG00000010705.6 83840 4786 123 ENSG00000230617.1 AC079987.2 chr7 83424880 83425002 + processed_pseudogene KNOWN OTTHUMG00000154685.1 123 123 1 ENSG00000230244.1 RAD23BP2 chr7 83663419 83664625 + processed_pseudogene KNOWN OTTHUMG00000154684.1 1207 1207 1 ENSG00000222994.1 AC006322.1 chr7 83919602 83919703 - miRNA NOVEL NA 102 102 1 ENSG00000075213.9 SEMA3A chr7 83955777 84492724 - protein_coding KNOWN OTTHUMG00000023443.14 536948 9371 56 ENSG00000227982.1 RPL7P30 chr7 84528122 84528830 - processed_pseudogene KNOWN OTTHUMG00000154720.2 709 709 1 ENSG00000235139.2 AC003984.1 chr7 84532476 84584322 + lincRNA NOVEL OTTHUMG00000154603.3 51847 4276 6 ENSG00000265050.1 AC092022.1 chr7 84665924 84666008 - miRNA NOVEL NA 85 85 1 ENSG00000235243.1 AC093716.1 chr7 84847877 84848253 - processed_pseudogene KNOWN OTTHUMG00000154642.1 377 377 1 ENSG00000232605.2 HMGN2P11 chr7 84876554 84876956 + processed_pseudogene KNOWN OTTHUMG00000154605.1 403 403 1 ENSG00000280325.1 AC074183.3 chr7 84939335 84940256 - TEC KNOWN OTTHUMG00000154637.1 922 922 1 ENSG00000229567.1 RP4-717I23.2 chr1 93278961 93279129 - processed_pseudogene KNOWN OTTHUMG00000010599.1 169 169 1 ENSG00000232019.1 AC074183.4 chr7 84939349 84940245 - lincRNA NOVEL OTTHUMG00000154628.1 897 782 2 ENSG00000229251.3 HNRNPA1P8 chr7 84983556 84984506 + processed_pseudogene KNOWN OTTHUMG00000154606.1 951 951 1 ENSG00000153993.12 SEMA3D chr7 84995553 85186855 - protein_coding KNOWN OTTHUMG00000154569.4 191303 8062 39 ENSG00000224059.1 HSPA8P16 chr7 85027828 85029692 + processed_pseudogene KNOWN OTTHUMG00000154604.1 1865 1865 1 ENSG00000230614.3 DYNLL1P7 chr7 85381118 85381375 - processed_pseudogene KNOWN OTTHUMG00000154586.1 258 258 1 ENSG00000225128.1 LINC00972 chr7 85421122 85489293 + lincRNA NOVEL OTTHUMG00000154585.2 68172 813 6 ENSG00000227785.1 AC092013.1 chr7 85636013 85636344 - processed_pseudogene KNOWN OTTHUMG00000154619.1 332 332 1 ENSG00000236610.1 SOCS5P1 chr7 86216785 86217733 - processed_pseudogene KNOWN OTTHUMG00000154618.1 949 949 1 ENSG00000198822.9 GRM3 chr7 86643914 86864884 + protein_coding KNOWN OTTHUMG00000022884.4 220971 4474 17 ENSG00000231255.1 AC005009.1 chr7 86775081 86776022 - antisense NOVEL OTTHUMG00000153976.1 942 269 2 ENSG00000117505.11 DR1 chr1 93345888 93369498 + protein_coding KNOWN OTTHUMG00000010862.2 23611 10949 9 ENSG00000233073.1 AC005009.2 chr7 86784226 86786670 - antisense NOVEL OTTHUMG00000153975.1 2445 924 5 ENSG00000164659.13 KIAA1324L chr7 86876906 87059699 - protein_coding KNOWN OTTHUMG00000153995.57 182794 8115 133 ENSG00000261462.1 CTA-254O6.1 chr7 87109539 87111282 + lincRNA NOVEL OTTHUMG00000173164.1 1744 1744 1 ENSG00000224046.1 AC005076.5 chr7 87151423 87152420 - antisense NOVEL OTTHUMG00000154197.1 998 888 4 ENSG00000135164.17 DMTF1 chr7 87152361 87196337 + protein_coding KNOWN OTTHUMG00000154135.64 43977 9417 310 ENSG00000278236.1 uc_338 chr7 87184849 87185020 + misc_RNA NOVEL NA 172 172 1 ENSG00000135185.10 TMEM243 chr7 87196160 87220587 - protein_coding KNOWN OTTHUMG00000130823.5 24428 3271 25 ENSG00000200397.1 Y_RNA chr7 87218611 87218712 - misc_RNA NOVEL NA 102 102 1 ENSG00000182165.16 TP53TG1 chr7 87325225 87345515 - lincRNA KNOWN OTTHUMG00000130822.5 20291 1023 21 ENSG00000273623.1 TP53TG1_1 chr7 87345082 87345233 + misc_RNA NOVEL NA 152 152 1 ENSG00000229635.1 RP4-713B5.2 chr1 93384487 93384998 - processed_pseudogene KNOWN OTTHUMG00000010861.1 512 512 1 ENSG00000276185.1 TP53TG1_2 chr7 87345305 87345486 + misc_RNA NOVEL NA 182 182 1 ENSG00000005469.10 CROT chr7 87345681 87399795 + protein_coding KNOWN OTTHUMG00000023653.5 54115 4979 67 ENSG00000005471.14 ABCB4 chr7 87401697 87480435 - protein_coding KNOWN OTTHUMG00000023396.15 78739 7494 131 ENSG00000085563.13 ABCB1 chr7 87503633 87713323 - protein_coding KNOWN OTTHUMG00000023393.25 209691 5806 123 ENSG00000231956.1 HNRNPA1P9 chr7 87521461 87522410 + processed_pseudogene KNOWN OTTHUMG00000154450.1 950 950 1 ENSG00000105784.14 RUNDC3B chr7 87627548 87832296 + protein_coding KNOWN OTTHUMG00000131035.4 204749 4710 65 ENSG00000075303.11 SLC25A40 chr7 87833568 87876357 - protein_coding KNOWN OTTHUMG00000131033.12 42790 5081 44 ENSG00000006634.6 DBF4 chr7 87876216 87909541 + protein_coding KNOWN OTTHUMG00000131034.6 33326 4583 63 ENSG00000008277.13 ADAM22 chr7 87934143 88202889 + protein_coding KNOWN OTTHUMG00000137417.9 268747 12199 195 ENSG00000075142.12 SRI chr7 88205118 88226993 - protein_coding KNOWN OTTHUMG00000157267.4 21876 4237 64 ENSG00000069424.13 KCNAB2 chr1 5991466 6101193 + protein_coding KNOWN OTTHUMG00000000795.8 109728 9534 192 ENSG00000207379.1 Y_RNA chr1 93385711 93385817 + misc_RNA NOVEL NA 107 107 1 ENSG00000254003.1 CTB-167B5.1 chr7 88216660 88219226 + antisense NOVEL OTTHUMG00000164017.1 2567 576 2 ENSG00000228113.6 AC003991.3 chr7 88219359 88304367 + antisense NOVEL OTTHUMG00000153895.6 85009 4838 50 ENSG00000127954.11 STEAP4 chr7 88270892 88306891 - protein_coding KNOWN OTTHUMG00000153853.7 36000 11245 13 ENSG00000225701.1 EIF4A1P13 chr7 88448788 88449017 - processed_pseudogene KNOWN OTTHUMG00000154432.1 230 230 1 ENSG00000207094.1 SNORA67 chr7 88449092 88449231 - snoRNA NOVEL NA 140 140 1 ENSG00000270812.1 CTA-326K9.1 chr7 88455309 88456191 + processed_pseudogene KNOWN OTTHUMG00000184446.1 883 883 1 ENSG00000235639.1 AC002069.6 chr7 88512029 88513187 - processed_pseudogene KNOWN OTTHUMG00000154429.1 1159 1159 1 ENSG00000228928.1 AC002069.5 chr7 88564793 88566281 - processed_pseudogene KNOWN OTTHUMG00000154417.2 1489 1489 1 ENSG00000231763.1 PQLC1P1 chr7 88610241 88610669 - processed_pseudogene KNOWN OTTHUMG00000154430.1 429 429 1 ENSG00000237709.1 EEF1A1P28 chr7 88639014 88640416 + processed_pseudogene KNOWN OTTHUMG00000154431.1 1403 1403 1 ENSG00000137942.15 FNBP1L chr1 93448131 93554661 + protein_coding KNOWN OTTHUMG00000010863.3 106531 5798 78 ENSG00000211518.1 AC006988.1 chr7 88640521 88640627 + miRNA NOVEL NA 107 107 1 ENSG00000233420.1 AC002127.4 chr7 88710631 88756725 + lincRNA NOVEL OTTHUMG00000153893.1 46095 792 6 ENSG00000227979.1 AC002127.2 chr7 88749470 88749694 + processed_pseudogene KNOWN OTTHUMG00000153858.1 225 225 1 ENSG00000182348.6 ZNF804B chr7 88759368 89337057 + protein_coding KNOWN OTTHUMG00000131037.2 577690 4685 7 ENSG00000164645.2 C7orf62 chr7 88794106 88795721 - protein_coding KNOWN OTTHUMG00000153859.1 1616 1023 2 ENSG00000227863.2 AC002383.2 chr7 89443974 89494262 + lincRNA NOVEL OTTHUMG00000153911.2 50289 671 6 ENSG00000239075.1 RNU6-274P chr7 89754620 89754726 - snRNA KNOWN NA 107 107 1 ENSG00000227646.6 STEAP2-AS1 chr7 89882353 90211635 - processed_transcript NOVEL OTTHUMG00000065036.5 329283 1208 5 ENSG00000238358.2 RP5-1121E10.2 chr7 90119299 90122890 - lincRNA NOVEL OTTHUMG00000158345.1 3592 578 2 ENSG00000235436.9 DPY19L2P4 chr7 90119400 90125600 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000158346.1 6201 2018 6 ENSG00000212601.1 RNA5SP53 chr1 93488333 93488452 - rRNA KNOWN NA 120 120 1 ENSG00000164647.7 STEAP1 chr7 90154375 90164829 + protein_coding KNOWN OTTHUMG00000023006.6 10455 1625 13 ENSG00000157214.12 STEAP2 chr7 90167590 90238137 + protein_coding KNOWN OTTHUMG00000023341.9 70548 8715 50 ENSG00000223029.1 AC004969.1 chr7 90171341 90171424 + miRNA NOVEL NA 84 84 1 ENSG00000105792.18 CFAP69 chr7 90245174 90311063 + protein_coding KNOWN OTTHUMG00000023434.8 65890 9139 148 ENSG00000207488.1 Y_RNA chr7 90251923 90252020 + misc_RNA NOVEL NA 98 98 1 ENSG00000234459.1 AC002064.4 chr7 90266034 90270216 - antisense NOVEL OTTHUMG00000063537.2 4183 289 3 ENSG00000225498.1 AC002064.5 chr7 90312496 90322592 + lincRNA NOVEL OTTHUMG00000063284.1 10097 733 3 ENSG00000105793.14 GTPBP10 chr7 90335223 90391455 + protein_coding KNOWN OTTHUMG00000023655.9 56233 10436 82 ENSG00000280440.1 AC002064.7 chr7 90345873 90346218 - TEC KNOWN OTTHUMG00000065234.1 346 346 1 ENSG00000157224.14 CLDN12 chr7 90383721 90513402 + protein_coding KNOWN OTTHUMG00000156612.4 129682 6741 57 ENSG00000137936.15 BCAR3 chr1 93561786 93847150 - protein_coding KNOWN OTTHUMG00000010301.3 285365 5042 71 ENSG00000273299.1 CTB-13L3.1 chr7 90403434 90513391 + processed_transcript NOVEL OTTHUMG00000186370.1 109958 371 4 ENSG00000058091.15 CDK14 chr7 90466424 91210590 + protein_coding KNOWN OTTHUMG00000023649.9 744167 6841 110 ENSG00000251154.1 AC006153.3 chr7 90469787 90488964 + unprocessed_pseudogene KNOWN OTTHUMG00000022900.6 19178 380 4 ENSG00000223969.4 AC002456.2 chr7 90590619 90597353 - antisense NOVEL OTTHUMG00000063906.3 6735 616 9 ENSG00000223584.1 TVP23CP1 chr7 90631906 90632568 + processed_pseudogene KNOWN OTTHUMG00000033493.2 663 639 2 ENSG00000226254.1 PTP4A1P3 chr7 91107374 91107793 + processed_pseudogene KNOWN OTTHUMG00000033517.2 420 420 1 ENSG00000157240.3 FZD1 chr7 91264364 91271326 + protein_coding KNOWN OTTHUMG00000023046.3 6963 6963 1 ENSG00000243144.5 RP11-115N4.1 chr7 91311368 91515409 + lincRNA NOVEL OTTHUMG00000156059.3 204042 1162 17 ENSG00000225843.1 NIPA2P1 chr7 91320128 91321103 - processed_pseudogene KNOWN OTTHUMG00000156061.1 976 976 1 ENSG00000235450.1 RP11-142A5.1 chr7 91380778 91556848 - lincRNA NOVEL OTTHUMG00000156060.1 176071 202 2 ENSG00000224093.4 RP5-1033H22.2 chr1 93592199 93605573 + antisense NOVEL OTTHUMG00000010302.1 13375 1954 13 ENSG00000223665.1 CTB-111F10.1 chr7 91638847 91643512 - lincRNA NOVEL OTTHUMG00000156062.1 4666 536 2 ENSG00000127989.12 MTERF1 chr7 91692008 91880720 - protein_coding KNOWN OTTHUMG00000156057.1 188713 4890 25 ENSG00000127914.15 AKAP9 chr7 91940867 92110673 + protein_coding KNOWN OTTHUMG00000131127.3 169807 18210 249 ENSG00000001630.14 CYP51A1 chr7 92112151 92142952 - protein_coding KNOWN OTTHUMG00000131131.5 30802 4074 30 ENSG00000240720.6 LRRD1 chr7 92112159 92179531 - protein_coding KNOWN OTTHUMG00000155861.3 67373 7294 28 ENSG00000188693.7 CYP51A1-AS1 chr7 92134604 92180725 + antisense NOVEL OTTHUMG00000156056.1 46122 2957 5 ENSG00000001631.13 KRIT1 chr7 92198969 92246166 - protein_coding KNOWN OTTHUMG00000131187.7 47198 6204 215 ENSG00000243107.1 AC000120.7 chr7 92200014 92206857 - sense_overlapping NOVEL OTTHUMG00000155860.1 6844 1589 2 ENSG00000200769.1 Y_RNA chr7 92202243 92202334 - misc_RNA NOVEL NA 92 92 1 ENSG00000221520.1 MIR1285-1 chr7 92204015 92204098 - miRNA KNOWN NA 84 84 1 ENSG00000230439.2 RP11-488P3.1 chr1 93752924 93775444 - sense_intronic NOVEL OTTHUMG00000010300.1 22521 1671 2 ENSG00000001629.8 ANKIB1 chr7 92246234 92401384 + protein_coding KNOWN OTTHUMG00000155859.1 155151 7130 47 ENSG00000230927.2 TMBIM7P chr7 92412976 92439562 - unitary_pseudogene KNOWN OTTHUMG00000155903.1 26587 1287 7 ENSG00000270453.1 CTB-10G5.1 chr7 92442077 92442489 + processed_pseudogene KNOWN OTTHUMG00000184444.1 413 413 1 ENSG00000157259.6 GATAD1 chr7 92447453 92458836 + protein_coding KNOWN OTTHUMG00000131201.2 11384 4791 10 ENSG00000244055.1 AC007566.10 chr7 92457564 92491610 + antisense NOVEL OTTHUMG00000155862.2 34047 701 7 ENSG00000242950.5 ERVW-1 chr7 92468380 92477986 - protein_coding KNOWN OTTHUMG00000131249.2 9607 6130 9 ENSG00000127980.14 PEX1 chr7 92487020 92528531 - protein_coding KNOWN OTTHUMG00000023926.5 41512 7849 120 ENSG00000127993.13 RBM48 chr7 92528773 92538005 + protein_coding KNOWN OTTHUMG00000159535.2 9233 4353 18 ENSG00000278819.1 RP5-1099C19.2 chr7 92540268 92557877 - unprocessed_pseudogene KNOWN OTTHUMG00000187687.1 17610 573 5 ENSG00000234545.6 FAM133B chr7 92560793 92590394 - protein_coding KNOWN OTTHUMG00000155863.8 29602 4462 73 ENSG00000211575.2 MIR760 chr1 93846810 93846917 + miRNA KNOWN NA 108 108 1 ENSG00000105810.8 CDK6 chr7 92604921 92836594 - protein_coding KNOWN OTTHUMG00000131697.2 231674 12260 22 ENSG00000206763.1 RNU6-10P chr7 92701708 92701814 - snRNA KNOWN NA 107 107 1 ENSG00000237819.4 AC002454.1 chr7 92836483 92917187 + antisense NOVEL OTTHUMG00000155818.1 80705 667 10 ENSG00000266794.2 RN7SL7P chr7 92971002 92971299 - misc_RNA KNOWN NA 298 298 1 ENSG00000205413.6 SAMD9 chr7 93099513 93118023 - protein_coding KNOWN OTTHUMG00000155809.1 18511 6855 7 ENSG00000177409.10 SAMD9L chr7 93130055 93148369 - protein_coding KNOWN OTTHUMG00000155807.1 18315 7135 37 ENSG00000188175.8 HEPACAM2 chr7 93188586 93226524 - protein_coding KNOWN OTTHUMG00000131732.3 37939 2483 44 ENSG00000004766.14 CCDC132 chr7 93232340 93361121 + protein_coding KNOWN OTTHUMG00000131733.2 128782 9454 201 ENSG00000004948.12 CALCR chr7 93424487 93574730 - protein_coding KNOWN OTTHUMG00000023599.4 150244 4042 98 ENSG00000208014.1 MIR653 chr7 93482760 93482855 - miRNA KNOWN NA 96 96 1 ENSG00000260464.1 RP4-561L24.3 chr1 93847174 93848939 + lincRNA NOVEL OTTHUMG00000175883.1 1766 1766 1 ENSG00000207656.1 MIR489 chr7 93483936 93484019 - miRNA KNOWN NA 84 84 1 ENSG00000127928.11 GNGT1 chr7 93591573 93911265 + protein_coding KNOWN OTTHUMG00000022908.4 319693 2361 14 ENSG00000281203.1 AC005024.1 chr7 93640349 93640416 - miRNA NOVEL NA 68 68 1 ENSG00000237729.2 AC002075.4 chr7 93669826 93670077 - processed_pseudogene KNOWN OTTHUMG00000155773.1 252 252 1 ENSG00000265423.1 MIR4652 chr7 93716928 93717005 + miRNA KNOWN NA 78 78 1 ENSG00000225898.1 AC002075.3 chr7 93777839 93778514 + processed_pseudogene KNOWN OTTHUMG00000155774.1 676 676 1 ENSG00000213483.4 NDUFAF4P2 chr7 93844789 93845308 + processed_pseudogene KNOWN OTTHUMG00000155771.1 520 520 1 ENSG00000105825.10 TFPI2 chr7 93885397 93890991 - protein_coding KNOWN OTTHUMG00000022963.3 5595 2663 11 ENSG00000234695.1 AC002076.10 chr7 93890913 93893601 + antisense NOVEL OTTHUMG00000155770.1 2689 527 2 ENSG00000278388.1 GS1-345D13.1 chr7 93914987 93915108 + unprocessed_pseudogene KNOWN OTTHUMG00000187688.1 122 122 1 ENSG00000067334.12 DNTTIP2 chr1 93866283 93879918 - protein_coding KNOWN OTTHUMG00000010268.5 13636 7519 26 ENSG00000127920.5 GNG11 chr7 93921699 93928610 + protein_coding KNOWN OTTHUMG00000023411.4 6912 3055 2 ENSG00000278959.1 RP11-455I9.1 chr7 93954044 93956519 - TEC KNOWN OTTHUMG00000173369.1 2476 2476 1 ENSG00000105829.10 BET1 chr7 93962762 94004382 - protein_coding KNOWN OTTHUMG00000023487.3 41621 5247 28 ENSG00000236861.5 AC006378.2 chr7 93969442 94011113 + antisense NOVEL OTTHUMG00000155775.2 41672 636 8 ENSG00000236453.4 AC003092.1 chr7 94022833 94066661 + lincRNA NOVEL OTTHUMG00000155746.2 43829 1064 9 ENSG00000236938.1 AC003092.2 chr7 94071759 94077157 - lincRNA NOVEL OTTHUMG00000155769.1 5399 446 3 ENSG00000164692.16 COL1A2 chr7 94394561 94431232 + protein_coding KNOWN OTTHUMG00000148675.2 36672 11156 165 ENSG00000222870.1 RNU6-1328P chr7 94495299 94495404 + snRNA KNOWN NA 106 106 1 ENSG00000127995.15 CASD1 chr7 94509219 94557019 + protein_coding KNOWN OTTHUMG00000023356.4 47801 5271 40 ENSG00000127990.14 SGCE chr7 94585230 94656209 - protein_coding KNOWN OTTHUMG00000022828.5 70980 2547 85 ENSG00000023909.8 GCLM chr1 93885205 93909456 - protein_coding KNOWN OTTHUMG00000010562.1 24252 5420 21 ENSG00000242265.4 PEG10 chr7 94656325 94669695 + protein_coding KNOWN OTTHUMG00000155578.4 13371 6689 23 ENSG00000232385.2 RPS3AP25 chr7 94695027 94695819 - processed_pseudogene KNOWN OTTHUMG00000155577.1 793 793 1 ENSG00000239030.1 RNU6-956P chr7 94712409 94712511 + snRNA KNOWN NA 103 103 1 ENSG00000214342.2 ATP5F1P2 chr7 94738652 94739411 + processed_pseudogene KNOWN OTTHUMG00000155560.1 760 760 1 ENSG00000230682.1 GRPEL2P3 chr7 94782886 94783525 + processed_pseudogene KNOWN OTTHUMG00000155561.2 640 640 1 ENSG00000222220.1 RN7SKP129 chr7 94801514 94801812 + misc_RNA KNOWN NA 299 299 1 ENSG00000219807.2 ARF1P1 chr7 94833904 94834447 + processed_pseudogene KNOWN OTTHUMG00000155563.1 544 544 1 ENSG00000158528.10 PPP1R9A chr7 94907202 95296415 + protein_coding KNOWN OTTHUMG00000155566.2 389214 11151 109 ENSG00000271159.1 HINT1P2 chr7 95018163 95018397 - processed_pseudogene KNOWN OTTHUMG00000184514.1 235 235 1 ENSG00000231153.1 AC002429.4 chr7 95018407 95018554 + processed_pseudogene KNOWN OTTHUMG00000155564.1 148 148 1 ENSG00000228463.7 AP006222.2 chr1 257864 297502 - lincRNA NOVEL OTTHUMG00000002553.2 39639 3954 11 ENSG00000116254.16 CHD5 chr1 6101793 6180123 - protein_coding KNOWN OTTHUMG00000000952.6 78331 9890 137 ENSG00000223490.2 CHCHD2P5 chr1 93921268 93921667 - processed_pseudogene KNOWN OTTHUMG00000057597.2 400 400 1 ENSG00000201607.1 RNU4-16P chr7 95098227 95098367 + snRNA KNOWN NA 141 141 1 ENSG00000236197.2 AC002429.5 chr7 95154713 95214332 - antisense NOVEL OTTHUMG00000155562.2 59620 2569 4 ENSG00000277296.1 AC002429.1 chr7 95156606 95156671 - miRNA NOVEL NA 66 66 1 ENSG00000005421.7 PON1 chr7 95297676 95324707 - protein_coding KNOWN OTTHUMG00000153894.3 27032 2832 24 ENSG00000237160.2 AC004022.7 chr7 95348718 95348910 - processed_pseudogene KNOWN OTTHUMG00000154136.2 193 193 1 ENSG00000228751.1 AC004022.8 chr7 95350164 95351229 + processed_pseudogene KNOWN OTTHUMG00000154137.2 1066 1066 1 ENSG00000105852.9 PON3 chr7 95359944 95396368 - protein_coding KNOWN OTTHUMG00000153917.4 36425 4040 67 ENSG00000105854.11 PON2 chr7 95404867 95435198 - protein_coding KNOWN OTTHUMG00000153948.6 30332 3708 82 ENSG00000273138.1 GS1-293C5.1 chr7 95416108 95416462 + antisense NOVEL OTTHUMG00000186281.1 355 355 1 ENSG00000233942.1 AC004012.1 chr7 95471835 95473998 + lincRNA NOVEL OTTHUMG00000154143.1 2164 534 2 ENSG00000234099.1 MTND4P11 chr1 93922574 93923945 - unprocessed_pseudogene KNOWN OTTHUMG00000010569.2 1372 1058 2 ENSG00000005981.11 ASB4 chr7 95478444 95540232 + protein_coding KNOWN OTTHUMG00000153960.7 61789 4605 10 ENSG00000279525.1 GS1-306C12.1 chr7 95542145 95544542 + TEC KNOWN OTTHUMG00000187152.1 2398 2398 1 ENSG00000004799.7 PDK4 chr7 95583499 95596491 - protein_coding KNOWN OTTHUMG00000153977.2 12993 4519 24 ENSG00000231170.4 AC002451.3 chr7 95596682 95613719 + antisense NOVEL OTTHUMG00000154145.1 17038 1043 6 ENSG00000158560.13 DYNC1I1 chr7 95772506 96110322 + protein_coding KNOWN OTTHUMG00000153983.5 337817 4568 142 ENSG00000279067.1 GS1-25M2.1 chr7 96118647 96119995 + TEC KNOWN OTTHUMG00000173262.1 1349 1349 1 ENSG00000004864.12 SLC25A13 chr7 96120220 96322147 - protein_coding KNOWN OTTHUMG00000023074.5 201928 3710 60 ENSG00000208025.1 MIR591 chr7 96219662 96219756 - miRNA KNOWN NA 95 95 1 ENSG00000237551.1 AC096775.2 chr7 96283357 96283804 + processed_pseudogene KNOWN OTTHUMG00000154144.1 448 448 1 ENSG00000220987.1 AC084368.1 chr7 96306760 96306860 - miRNA NOVEL NA 101 101 1 ENSG00000235794.1 RP5-837O21.6 chr1 93924386 93924716 - unprocessed_pseudogene KNOWN OTTHUMG00000010568.2 331 331 1 ENSG00000275834.1 RP11-440E5.1 chr7 96306810 96306874 + processed_pseudogene KNOWN OTTHUMG00000187689.1 65 65 1 ENSG00000207045.1 RNU6-532P chr7 96330638 96330744 + snRNA KNOWN NA 107 107 1 ENSG00000207115.1 RNU6-364P chr7 96341140 96341246 + snRNA KNOWN NA 107 107 1 ENSG00000252872.1 RNU7-188P chr7 96377857 96377920 + snRNA KNOWN NA 64 64 1 ENSG00000238385.1 AC004458.1 chr7 96468331 96468422 - miRNA NOVEL NA 92 92 1 ENSG00000127922.8 SHFM1 chr7 96481626 96709891 - protein_coding KNOWN OTTHUMG00000150680.8 228266 11490 94 ENSG00000227284.2 MARK2P10 chr7 96858182 96859618 + processed_pseudogene KNOWN OTTHUMG00000154199.1 1437 1437 1 ENSG00000244318.3 RN7SL252P chr7 96940068 96940364 - misc_RNA KNOWN NA 297 297 1 ENSG00000231764.7 DLX6-AS1 chr7 96955141 97014065 - antisense KNOWN OTTHUMG00000154198.8 58925 16633 20 ENSG00000274409.1 Evf1_1 chr7 96965302 96965481 + misc_RNA NOVEL NA 180 180 1 ENSG00000232752.1 RP5-837O21.5 chr1 93924743 93925385 - unprocessed_pseudogene KNOWN OTTHUMG00000010567.2 643 643 1 ENSG00000277124.1 Evf1_2 chr7 96965489 96965695 + misc_RNA NOVEL NA 207 207 1 ENSG00000006377.10 DLX6 chr7 97005548 97011039 + protein_coding KNOWN OTTHUMG00000154201.6 5492 3449 8 ENSG00000274709.1 Evf-2_5p chr7 97013925 97014066 - misc_RNA NOVEL NA 142 142 1 ENSG00000105880.4 DLX5 chr7 97020392 97025097 - protein_coding KNOWN OTTHUMG00000154200.4 4706 1895 8 ENSG00000196636.7 ACN9 chr7 97116590 97181763 + protein_coding KNOWN OTTHUMG00000154064.6 65174 2303 9 ENSG00000224551.1 HMGB3P21 chr7 97135015 97135561 - processed_pseudogene KNOWN OTTHUMG00000154299.1 547 547 1 ENSG00000224475.1 AC073900.4 chr7 97200708 97201483 - processed_pseudogene KNOWN OTTHUMG00000154124.1 776 776 1 ENSG00000221192.1 AC004745.1 chr7 97291514 97291596 - miRNA NOVEL NA 83 83 1 ENSG00000226046.1 AP1S2P1 chr7 97437518 97437896 + processed_pseudogene KNOWN OTTHUMG00000154127.1 379 379 1 ENSG00000199475.1 RN7SKP104 chr7 97598933 97599260 - misc_RNA KNOWN NA 328 328 1 ENSG00000229842.2 RP5-837O21.4 chr1 93925406 93926072 - unprocessed_pseudogene KNOWN OTTHUMG00000010566.2 667 667 1 ENSG00000006128.10 TAC1 chr7 97731908 97740472 + protein_coding KNOWN OTTHUMG00000154069.3 8565 1888 25 ENSG00000070669.15 ASNS chr7 97852118 97872542 - protein_coding KNOWN OTTHUMG00000022892.11 20425 4455 131 ENSG00000226744.1 AC079781.5 chr7 97870167 97870289 + processed_pseudogene KNOWN OTTHUMG00000154123.1 123 123 1 ENSG00000235982.1 AC007875.3 chr7 97883282 97883795 + processed_pseudogene KNOWN OTTHUMG00000154165.1 514 514 1 ENSG00000231812.1 SNRPCP9 chr7 97885868 97886074 + processed_pseudogene KNOWN OTTHUMG00000154122.1 207 207 1 ENSG00000237818.1 RPS3AP29 chr7 97898347 97899115 - processed_pseudogene KNOWN OTTHUMG00000154184.2 769 769 1 ENSG00000221048.1 AC079781.1 chr7 97905972 97906119 + miRNA NOVEL NA 148 148 1 ENSG00000231859.1 AC007875.2 chr7 97906429 97906822 + processed_pseudogene KNOWN OTTHUMG00000154164.1 394 394 1 ENSG00000232032.1 AC079781.7 chr7 97908256 97908424 + processed_pseudogene KNOWN OTTHUMG00000154163.1 169 169 1 ENSG00000232097.1 AC079781.8 chr7 97938439 97938794 - processed_pseudogene KNOWN OTTHUMG00000154187.1 356 356 1 ENSG00000250890.1 RP5-837O21.8 chr1 93926032 93926188 - unprocessed_pseudogene KNOWN OTTHUMG00000012161.1 157 157 1 ENSG00000238228.1 OR7E7P chr7 97946987 97947998 - unprocessed_pseudogene KNOWN OTTHUMG00000154185.1 1012 1012 1 ENSG00000266318.1 MIR5692A1 chr7 97963658 97963726 + miRNA KNOWN NA 69 69 1 ENSG00000266668.1 MIR5692C2 chr7 97964405 97964481 - miRNA KNOWN NA 77 77 1 ENSG00000183444.10 OR7E38P chr7 97966090 97967074 - unprocessed_pseudogene KNOWN OTTHUMG00000154186.2 985 985 1 ENSG00000243554.1 AC004967.7 chr7 97969005 97972254 - unprocessed_pseudogene KNOWN OTTHUMG00000154182.2 3250 447 6 ENSG00000135175.5 OCM2 chr7 97984684 97991169 - protein_coding KNOWN OTTHUMG00000154162.3 6486 833 8 ENSG00000277946.1 Metazoa_SRP chr7 97998325 97998622 + misc_RNA NOVEL NA 298 298 1 ENSG00000164715.5 LMTK2 chr7 98106885 98209633 + protein_coding KNOWN OTTHUMG00000154256.2 102749 9139 18 ENSG00000180535.3 BHLHA15 chr7 98211427 98212979 + protein_coding KNOWN OTTHUMG00000154289.2 1553 798 3 ENSG00000205356.8 TECPR1 chr7 98214624 98252251 - protein_coding KNOWN OTTHUMG00000154273.5 37628 9066 105 ENSG00000236689.1 RP5-837O21.3 chr1 93926615 93927569 - unprocessed_pseudogene KNOWN OTTHUMG00000010565.2 955 677 2 ENSG00000164713.8 BRI3 chr7 98252379 98310441 + protein_coding KNOWN OTTHUMG00000154275.4 58063 5139 20 ENSG00000006453.12 BAIAP2L1 chr7 98291651 98401068 - protein_coding KNOWN OTTHUMG00000165117.1 109418 4798 33 ENSG00000272950.1 RP11-307C18.1 chr7 98322853 98323430 + antisense NOVEL OTTHUMG00000186295.1 578 578 1 ENSG00000214389.2 RPS3AP26 chr7 98385801 98386584 - processed_pseudogene KNOWN OTTHUMG00000154287.1 784 784 1 ENSG00000213455.3 AC091654.7 chr7 98454119 98454617 - processed_pseudogene KNOWN OTTHUMG00000154288.1 499 499 1 ENSG00000223402.1 AC074121.4 chr7 98478551 98479225 - processed_pseudogene KNOWN OTTHUMG00000154370.2 675 348 2 ENSG00000106236.3 NPTX2 chr7 98617297 98629868 + protein_coding KNOWN OTTHUMG00000154369.1 12572 3016 8 ENSG00000207204.1 RNU6-393P chr7 98794718 98794824 - snRNA KNOWN NA 107 107 1 ENSG00000166448.13 TMEM130 chr7 98846488 98870771 - protein_coding KNOWN OTTHUMG00000154419.6 24284 4663 42 ENSG00000196367.11 TRRAP chr7 98877933 99013243 + protein_coding KNOWN OTTHUMG00000150403.3 135311 13218 356 ENSG00000226960.1 RP5-837O21.1 chr1 93927714 93928302 - unprocessed_pseudogene KNOWN OTTHUMG00000010563.2 589 589 1 ENSG00000266019.1 MIR3609 chr7 98881650 98881729 + miRNA KNOWN NA 80 80 1 ENSG00000238109.1 AC004893.10 chr7 98998538 98999930 - processed_pseudogene KNOWN OTTHUMG00000154418.1 1393 1393 1 ENSG00000242687.2 AC004893.11 chr7 99013165 99048240 + antisense NOVEL OTTHUMG00000154440.2 35076 4194 10 ENSG00000198742.8 SMURF1 chr7 99027438 99144100 - protein_coding KNOWN OTTHUMG00000150272.3 116663 6276 51 ENSG00000185467.7 KPNA7 chr7 99173574 99207506 - protein_coding KNOWN OTTHUMG00000154412.1 33933 1725 10 ENSG00000002079.11 MYH16 chr7 99238794 99311130 + unitary_pseudogene KNOWN OTTHUMG00000154426.2 72337 6346 69 ENSG00000241685.7 ARPC1A chr7 99325898 99388164 + protein_coding KNOWN OTTHUMG00000154553.2 62267 2557 44 ENSG00000130429.11 ARPC1B chr7 99374249 99394801 + protein_coding KNOWN OTTHUMG00000154552.24 20553 3979 106 ENSG00000106244.11 PDAP1 chr7 99392048 99408829 - protein_coding KNOWN OTTHUMG00000154629.2 16782 2854 20 ENSG00000106245.8 BUD31 chr7 99408641 99419616 + protein_coding KNOWN OTTHUMG00000154602.2 10976 2381 37 ENSG00000233129.1 RP5-837O21.2 chr1 93934479 93935244 - processed_pseudogene KNOWN OTTHUMG00000010564.1 766 766 1 ENSG00000106246.16 PTCD1 chr7 99416739 99466163 - protein_coding KNOWN OTTHUMG00000154600.5 49425 5805 20 ENSG00000248919.6 ATP5J2-PTCD1 chr7 99419749 99466197 - protein_coding KNOWN OTTHUMG00000160779.2 46449 2859 16 ENSG00000160917.13 CPSF4 chr7 99438922 99457371 + protein_coding KNOWN OTTHUMG00000154599.22 18450 4250 72 ENSG00000228335.1 AC073063.10 chr7 99442890 99443496 - processed_pseudogene KNOWN OTTHUMG00000154658.1 607 607 1 ENSG00000241468.6 ATP5J2 chr7 99448475 99466331 - protein_coding KNOWN OTTHUMG00000154609.5 17857 2275 35 ENSG00000198556.12 ZNF789 chr7 99472841 99503650 + protein_coding KNOWN OTTHUMG00000154601.4 30810 6683 47 ENSG00000160908.14 ZNF394 chr7 99486519 99500324 - protein_coding KNOWN OTTHUMG00000154660.1 13806 3505 17 ENSG00000196652.10 ZKSCAN5 chr7 99504651 99534700 + protein_coding KNOWN OTTHUMG00000156749.1 30050 6056 26 ENSG00000221909.2 FAM200A chr7 99546308 99558536 - protein_coding KNOWN OTTHUMG00000156723.1 12229 2717 4 ENSG00000197343.9 ZNF655 chr7 99558406 99576453 + protein_coding KNOWN OTTHUMG00000185968.1 18048 8401 96 ENSG00000198691.10 ABCA4 chr1 93992835 94121132 - protein_coding KNOWN OTTHUMG00000010622.3 128298 8201 98 ENSG00000272647.1 GS1-259H13.10 chr7 99558668 99607810 + protein_coding NOVEL OTTHUMG00000156637.1 49143 1084 10 ENSG00000265324.1 AC005020.1 chr7 99586915 99586999 + miRNA NOVEL NA 85 85 1 ENSG00000244219.5 GS1-259H13.2 chr7 99598066 99610813 + lincRNA NOVEL OTTHUMG00000156636.1 12748 1410 16 ENSG00000197037.9 ZSCAN25 chr7 99616946 99632407 + protein_coding KNOWN OTTHUMG00000074055.5 15462 7094 49 ENSG00000224448.1 GS1-259H13.7 chr7 99638242 99638767 - processed_pseudogene KNOWN OTTHUMG00000156727.1 526 526 1 ENSG00000106258.12 CYP3A5 chr7 99648194 99679998 - protein_coding KNOWN OTTHUMG00000156724.2 31805 6731 118 ENSG00000160870.11 CYP3A7 chr7 99684679 99735196 - protein_coding KNOWN OTTHUMG00000156726.2 50518 4189 55 ENSG00000221487.1 AC069294.1 chr7 99713037 99713152 + miRNA NOVEL NA 116 116 1 ENSG00000160868.13 CYP3A4 chr7 99756960 99784265 - protein_coding KNOWN OTTHUMG00000156651.1 27306 3141 31 ENSG00000273407.1 RP11-757A13.1 chr7 99766543 99766892 + antisense NOVEL OTTHUMG00000186290.1 350 350 1 ENSG00000116251.8 RPL22 chr1 6181269 6209389 - protein_coding KNOWN OTTHUMG00000000953.4 28121 4900 32 ENSG00000233482.1 RP11-78O9.1 chr1 94145111 94145619 + antisense NOVEL OTTHUMG00000010623.1 509 352 2 ENSG00000261511.1 CTD-3244O18.7 chr7 99820018 99820086 + unprocessed_pseudogene KNOWN OTTHUMG00000172706.1 69 69 1 ENSG00000021461.15 CYP3A43 chr7 99828013 99866102 + protein_coding KNOWN OTTHUMG00000156498.2 38090 2637 144 ENSG00000260445.1 CTD-3244O18.5 chr7 99869841 99869894 + unprocessed_pseudogene KNOWN OTTHUMG00000172691.1 54 54 1 ENSG00000260524.1 CYP3A52P chr7 99872168 99872258 + unprocessed_pseudogene KNOWN OTTHUMG00000172692.1 91 91 1 ENSG00000244623.1 OR2AE1 chr7 99875987 99877057 - protein_coding KNOWN OTTHUMG00000156650.1 1071 1071 1 ENSG00000146833.14 TRIM4 chr7 99876958 99919600 - protein_coding KNOWN OTTHUMG00000156648.1 42643 4891 27 ENSG00000176402.5 GJC3 chr7 99923269 99929620 - protein_coding KNOWN OTTHUMG00000156649.1 6352 1116 2 ENSG00000237640.1 RP4-604G5.1 chr7 99929392 99948620 + antisense NOVEL OTTHUMG00000156511.1 19229 680 3 ENSG00000199711.1 Y_RNA chr7 99936610 99936711 + misc_RNA NOVEL NA 102 102 1 ENSG00000222966.1 SNORA40 chr7 99952033 99952158 + snoRNA NOVEL NA 126 126 1 ENSG00000137962.11 ARHGAP29 chr1 94148988 94275068 - protein_coding KNOWN OTTHUMG00000010643.3 126081 15524 72 ENSG00000160862.11 AZGP1 chr7 99966720 99976157 - protein_coding KNOWN OTTHUMG00000023066.4 9438 2699 16 ENSG00000214313.7 AZGP1P1 chr7 99980762 99987535 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156513.2 6774 1735 6 ENSG00000235713.1 RP4-604G5.3 chr7 99992397 99993050 + unprocessed_pseudogene KNOWN OTTHUMG00000156512.1 654 654 1 ENSG00000106261.15 ZKSCAN1 chr7 100015572 100041689 + protein_coding KNOWN OTTHUMG00000156534.2 26118 10319 29 ENSG00000166529.13 ZSCAN21 chr7 100049774 100065038 + protein_coding KNOWN OTTHUMG00000154583.5 15265 2140 21 ENSG00000166526.15 ZNF3 chr7 100064033 100082548 - protein_coding KNOWN OTTHUMG00000154596.74 18516 5424 68 ENSG00000168090.8 COPS6 chr7 100088954 100092200 + protein_coding KNOWN OTTHUMG00000154632.7 3247 2807 55 ENSG00000166508.16 MCM7 chr7 100092728 100101940 - protein_coding KNOWN OTTHUMG00000154671.8 9213 4387 113 ENSG00000207547.1 MIR25 chr7 100093560 100093643 - miRNA KNOWN NA 84 84 1 ENSG00000207757.1 MIR93 chr7 100093768 100093847 - miRNA KNOWN NA 80 80 1 ENSG00000264963.2 RN7SL440P chr1 94150738 94151080 + misc_RNA KNOWN NA 343 343 1 ENSG00000208036.1 MIR106B chr7 100093993 100094074 - miRNA KNOWN NA 82 82 1 ENSG00000221838.8 AP4M1 chr7 100101549 100110345 + protein_coding KNOWN OTTHUMG00000154722.106 8797 4722 167 ENSG00000106290.13 TAF6 chr7 100107070 100119841 - protein_coding KNOWN OTTHUMG00000154771.10 12772 4086 153 ENSG00000242798.1 RP11-506M12.1 chr7 100115214 100127139 - antisense NOVEL OTTHUMG00000159264.1 11926 572 2 ENSG00000166997.6 CNPY4 chr7 100119613 100125511 + protein_coding KNOWN OTTHUMG00000154817.5 5899 2475 22 ENSG00000214309.4 MBLAC1 chr7 100126694 100128498 + protein_coding KNOWN OTTHUMG00000154846.4 1805 1571 4 ENSG00000235077.1 AC073842.19 chr7 100130964 100140439 + antisense NOVEL OTTHUMG00000154845.1 9476 342 2 ENSG00000214142.2 RPL7P60 chr7 100139629 100140682 - processed_pseudogene KNOWN OTTHUMG00000154844.1 1054 735 2 ENSG00000188186.9 LAMTOR4 chr7 100148907 100155944 + protein_coding KNOWN OTTHUMG00000154854.7 7038 1936 40 ENSG00000146826.13 C7orf43 chr7 100154420 100158715 - protein_coding KNOWN OTTHUMG00000154862.5 4296 3255 74 ENSG00000231363.1 RP11-148B18.1 chr1 94247908 94249492 + lincRNA NOVEL OTTHUMG00000010648.1 1585 212 2 ENSG00000266154.1 MIR4658 chr7 100156605 100156669 - miRNA KNOWN NA 65 65 1 ENSG00000197093.9 GAL3ST4 chr7 100159244 100168750 - protein_coding KNOWN OTTHUMG00000154885.3 9507 3397 24 ENSG00000213420.6 GPC2 chr7 100169606 100177372 - protein_coding KNOWN OTTHUMG00000154894.3 7767 3828 38 ENSG00000066923.16 STAG3 chr7 100177563 100221488 + protein_coding KNOWN OTTHUMG00000155183.15 43926 8583 296 ENSG00000239521.6 GATS chr7 100200653 100272218 - protein_coding KNOWN OTTHUMG00000155289.6 71566 4860 51 ENSG00000281555.1 AC005071.3 chr7 100217065 100217165 - miRNA NOVEL NA 101 101 1 ENSG00000213413.2 PVRIG chr7 100218241 100221490 + protein_coding KNOWN OTTHUMG00000156798.3 3250 1984 8 ENSG00000222482.1 AC005071.1 chr7 100220027 100220120 - miRNA NOVEL NA 94 94 1 ENSG00000214300.7 SPDYE3 chr7 100307702 100322196 + protein_coding KNOWN OTTHUMG00000155462.3 14495 4131 16 ENSG00000078319.8 PMS2P1 chr7 100320992 100341908 - unprocessed_pseudogene KNOWN OTTHUMG00000156885.1 20917 1044 6 ENSG00000178596.10 GAPDHP29 chr1 94302038 94303022 + processed_pseudogene KNOWN OTTHUMG00000010649.2 985 985 1 ENSG00000201913.1 Y_RNA chr7 100330777 100330877 - misc_RNA NOVEL NA 101 101 1 ENSG00000242294.5 STAG3L5P chr7 100336079 100351900 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156884.1 15822 2804 28 ENSG00000272752.4 STAG3L5P-PVRIG2P-PILRB chr7 100336104 100367831 + protein_coding KNOWN OTTHUMG00000186252.1 31728 3818 57 ENSG00000281827.1 AC005071.4 chr7 100344375 100344475 - miRNA NOVEL NA 101 101 1 ENSG00000121716.17 PILRB chr7 100352176 100367733 + protein_coding KNOWN OTTHUMG00000155363.10 15558 5764 90 ENSG00000235333.3 PVRIG2P chr7 100352360 100353692 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156886.1 1333 978 5 ENSG00000278005.1 MIR6840 chr7 100356651 100356721 + miRNA KNOWN NA 71 71 1 ENSG00000085514.14 PILRA chr7 100367530 100400099 + protein_coding KNOWN OTTHUMG00000155248.5 32570 2006 33 ENSG00000278832.1 AC005071.2 chr7 100372544 100372609 + miRNA NOVEL NA 66 66 1 ENSG00000078487.16 ZCWPW1 chr7 100400826 100428992 - protein_coding KNOWN OTTHUMG00000159537.1 28167 3318 78 ENSG00000236098.1 RP11-148B18.4 chr1 94318479 94324569 - lincRNA NOVEL OTTHUMG00000010651.1 6091 592 2 ENSG00000146834.12 MEPCE chr7 100428790 100434126 + protein_coding KNOWN OTTHUMG00000155255.3 5337 3420 13 ENSG00000241357.1 RP11-758P17.2 chr7 100435257 100436510 + antisense NOVEL OTTHUMG00000159538.1 1254 333 2 ENSG00000160813.5 PPP1R35 chr7 100435282 100436565 - protein_coding KNOWN OTTHUMG00000159540.2 1284 1187 14 ENSG00000240211.1 RP11-758P17.3 chr7 100436204 100438504 + antisense NOVEL OTTHUMG00000159539.1 2301 303 2 ENSG00000185955.4 C7orf61 chr7 100456615 100464271 - protein_coding KNOWN OTTHUMG00000150234.2 7657 1191 5 ENSG00000166925.7 TSC22D4 chr7 100463359 100479279 - protein_coding KNOWN OTTHUMG00000150233.1 15921 3715 24 ENSG00000166924.7 NYAP1 chr7 100483927 100494799 + protein_coding KNOWN OTTHUMG00000155290.3 10873 3586 17 ENSG00000225807.1 RP11-44M6.1 chr7 100509717 100519926 + lincRNA NOVEL OTTHUMG00000156028.1 10210 570 5 ENSG00000242101.3 RN7SL416P chr7 100530362 100530659 - misc_RNA KNOWN NA 298 298 1 ENSG00000106351.11 AGFG2 chr7 100539211 100568219 + protein_coding KNOWN OTTHUMG00000156029.1 29009 5478 40 ENSG00000226835.1 RP11-148B18.3 chr1 94333267 94334848 + lincRNA NOVEL OTTHUMG00000010650.1 1582 480 2 ENSG00000184414.2 RP11-44M6.3 chr7 100570131 100571136 + processed_pseudogene KNOWN OTTHUMG00000156030.1 1006 1006 1 ENSG00000205307.9 SAP25 chr7 100572228 100573820 - protein_coding KNOWN OTTHUMG00000187472.1 1593 1388 17 ENSG00000274272.1 RP11-44M6.7 chr7 100572232 100578700 - processed_transcript NOVEL OTTHUMG00000187473.1 6469 4401 16 ENSG00000077454.14 LRCH4 chr7 100574011 100586153 - protein_coding KNOWN OTTHUMG00000159544.1 12143 6838 84 ENSG00000106336.11 FBXO24 chr7 100583982 100601117 + protein_coding KNOWN OTTHUMG00000159543.3 17136 3353 61 ENSG00000224729.5 PCOLCE-AS1 chr7 100589402 100604206 - antisense KNOWN OTTHUMG00000156674.2 14805 2705 11 ENSG00000106333.11 PCOLCE chr7 100602177 100608175 + protein_coding KNOWN OTTHUMG00000156675.1 5999 3532 34 ENSG00000106330.10 MOSPD3 chr7 100612102 100615384 + protein_coding KNOWN OTTHUMG00000159599.1 3283 1726 38 ENSG00000106327.11 TFR2 chr7 100620416 100642779 - protein_coding KNOWN OTTHUMG00000159598.4 22364 5065 134 ENSG00000077080.8 ACTL6B chr7 100643097 100656461 - protein_coding KNOWN OTTHUMG00000159661.2 13365 2389 40 ENSG00000232918.2 RP11-366L18.1 chr1 94406395 94406882 - processed_pseudogene KNOWN OTTHUMG00000010653.2 488 488 1 ENSG00000172354.8 GNB2 chr7 100673531 100679174 + protein_coding KNOWN OTTHUMG00000137419.4 5644 2857 99 ENSG00000146830.9 GIGYF1 chr7 100679507 100689448 - protein_coding KNOWN OTTHUMG00000157036.3 9942 6709 36 ENSG00000172336.4 POP7 chr7 100706053 100707495 + protein_coding KNOWN OTTHUMG00000044311.2 1443 988 4 ENSG00000130427.2 EPO chr7 100720800 100723700 + protein_coding KNOWN OTTHUMG00000152121.1 2901 1330 5 ENSG00000146839.17 ZAN chr7 100733626 100797797 + protein_coding KNOWN OTTHUMG00000157037.5 64172 8841 375 ENSG00000196411.8 EPHB4 chr7 100802565 100827521 - protein_coding KNOWN OTTHUMG00000157040.1 24957 6435 91 ENSG00000263672.2 RN7SL750P chr7 100821027 100821264 - misc_RNA KNOWN NA 238 238 1 ENSG00000146828.16 SLC12A9 chr7 100826820 100867009 + protein_coding KNOWN OTTHUMG00000156045.2 40190 8894 105 ENSG00000236305.1 RP11-126L15.4 chr7 100837314 100852616 - antisense NOVEL OTTHUMG00000157041.1 15303 369 2 ENSG00000087077.10 TRIP6 chr7 100867138 100873454 + protein_coding KNOWN OTTHUMG00000157029.2 6317 2841 57 ENSG00000117528.10 ABCD3 chr1 94418455 94518666 + protein_coding KNOWN OTTHUMG00000010717.1 100212 7519 60 ENSG00000273985.1 MIR6875 chr7 100868036 100868107 + miRNA KNOWN NA 72 72 1 ENSG00000087087.17 SRRT chr7 100875111 100888664 + protein_coding KNOWN OTTHUMG00000157031.4 13554 4588 132 ENSG00000176125.4 UFSP1 chr7 100888723 100889718 - protein_coding KNOWN OTTHUMG00000159662.1 996 996 1 ENSG00000087085.12 ACHE chr7 100889994 100896974 - protein_coding KNOWN OTTHUMG00000157033.2 6981 3731 52 ENSG00000239825.3 RN7SL549P chr7 100906291 100906572 - misc_RNA KNOWN NA 282 282 1 ENSG00000235926.1 RP13-650G11.1 chr7 100928370 100928540 + processed_pseudogene KNOWN OTTHUMG00000157035.1 171 171 1 ENSG00000169894.16 MUC3A chr7 100949555 100968346 + protein_coding KNOWN OTTHUMG00000157038.5 18792 11374 37 ENSG00000274993.1 RP11-395B7.2 chr7 100963828 100968124 - antisense NOVEL OTTHUMG00000157043.3 4297 2555 8 ENSG00000205277.8 MUC12 chr7 100969623 101018949 + protein_coding KNOWN OTTHUMG00000157042.1 49327 17130 39 ENSG00000227053.1 RP11-395B7.4 chr7 101014320 101017608 - antisense NOVEL OTTHUMG00000157034.1 3289 407 6 ENSG00000117525.12 F3 chr1 94529225 94541800 - protein_coding KNOWN OTTHUMG00000010716.3 12576 2875 18 ENSG00000169876.12 MUC17 chr7 101020072 101058745 + protein_coding KNOWN OTTHUMG00000157030.2 38674 14579 29 ENSG00000222636.1 RN7SKP54 chr7 101058299 101058567 + misc_RNA KNOWN NA 269 269 1 ENSG00000169871.11 TRIM56 chr7 101085439 101097967 + protein_coding KNOWN OTTHUMG00000157032.2 12529 11173 11 ENSG00000106366.8 SERPINE1 chr7 101127089 101139266 + protein_coding KNOWN OTTHUMG00000157107.2 12178 3190 9 ENSG00000106367.12 AP1S1 chr7 101154397 101161596 + protein_coding KNOWN OTTHUMG00000157103.1 7200 1539 16 ENSG00000264425.1 MIR4653 chr7 101159473 101159555 + miRNA KNOWN NA 83 83 1 ENSG00000128564.6 VGF chr7 101162509 101165593 - protein_coding KNOWN OTTHUMG00000157109.2 3085 2704 8 ENSG00000167011.7 NAT16 chr7 101170493 101180276 - protein_coding KNOWN OTTHUMG00000157110.1 9784 3871 14 ENSG00000106384.9 MOGAT3 chr7 101195007 101201021 - protein_coding KNOWN OTTHUMG00000023328.3 6015 2218 19 ENSG00000205267.5 DGAT2L7P chr7 101201809 101203526 - unprocessed_pseudogene KNOWN OTTHUMG00000183892.1 1718 744 5 ENSG00000226944.1 RP1-120G22.11 chr1 6204840 6205780 - antisense NOVEL OTTHUMG00000041452.1 941 378 3 ENSG00000223675.1 RP11-86H7.6 chr1 94585556 94592297 - lincRNA NOVEL OTTHUMG00000010718.1 6742 2171 2 ENSG00000213394.3 RP4-747G18.5 chr7 101203614 101204495 - processed_pseudogene KNOWN OTTHUMG00000157104.3 882 882 1 ENSG00000106397.10 PLOD3 chr7 101205977 101218420 - protein_coding KNOWN OTTHUMG00000157111.3 12444 5671 86 ENSG00000106400.10 ZNHIT1 chr7 101217668 101224190 + protein_coding KNOWN OTTHUMG00000157113.1 6523 5510 20 ENSG00000106404.12 CLDN15 chr7 101232092 101238820 - protein_coding KNOWN OTTHUMG00000150512.3 6729 2893 37 ENSG00000214253.7 FIS1 chr7 101239458 101252316 - protein_coding KNOWN OTTHUMG00000157106.2 12859 1795 38 ENSG00000207454.1 RNU6-1104P chr7 101269938 101270041 - snRNA KNOWN NA 104 104 1 ENSG00000278683.1 RP11-132A1.6 chr7 101273322 101273715 + unprocessed_pseudogene KNOWN OTTHUMG00000187690.1 394 394 1 ENSG00000214252.4 AZGP1P2 chr7 101287482 101289771 - unprocessed_pseudogene KNOWN OTTHUMG00000157108.1 2290 345 2 ENSG00000232301.1 RP11-132A1.3 chr7 101299613 101301270 + antisense NOVEL OTTHUMG00000157112.1 1658 756 2 ENSG00000232445.1 RP11-132A1.4 chr7 101308346 101310985 + antisense NOVEL OTTHUMG00000157105.1 2640 705 2 ENSG00000235565.1 RP11-86H7.7 chr1 94621151 94624184 - lincRNA NOVEL OTTHUMG00000010719.1 3034 2272 2 ENSG00000128581.14 IFT22 chr7 101313367 101321823 - protein_coding KNOWN OTTHUMG00000157136.2 8457 4132 45 ENSG00000160963.12 COL26A1 chr7 101362820 101559024 + protein_coding KNOWN OTTHUMG00000150033.5 196205 3156 29 ENSG00000233683.1 RP5-1106H14.1 chr7 101388868 101389080 - processed_pseudogene KNOWN OTTHUMG00000157138.1 213 213 1 ENSG00000233123.1 LINC01007 chr7 101562779 101569006 - lincRNA NOVEL OTTHUMG00000157139.2 6228 2641 7 ENSG00000106436.4 MYL10 chr7 101613325 101629296 - protein_coding KNOWN OTTHUMG00000157137.1 15972 1009 8 ENSG00000279538.1 AC004953.1 chr7 101635218 101638685 + protein_coding KNOWN NA 3468 273 6 ENSG00000257923.8 CUX1 chr7 101815904 102283957 + protein_coding KNOWN OTTHUMG00000157129.6 468054 17788 355 ENSG00000259294.1 CTA-339C12.1 chr7 101822247 101824729 - antisense NOVEL OTTHUMG00000172408.1 2483 622 2 ENSG00000272219.1 CTB-181H17.1 chr7 101960116 101961894 + sense_intronic NOVEL OTTHUMG00000185570.1 1779 1779 1 ENSG00000261535.1 CTA-305I2.1 chr7 102153355 102154463 - antisense NOVEL OTTHUMG00000174510.1 1109 801 2 ENSG00000224081.6 LINC01057 chr1 94638461 94820281 - lincRNA NOVEL OTTHUMG00000010701.2 181821 2357 29 ENSG00000280404.1 AC005086.3 chr7 102161120 102161337 - pseudogene NOVEL NA 218 213 3 ENSG00000280004.1 AC005086.2 chr7 102186819 102187039 - pseudogene NOVEL NA 221 219 2 ENSG00000279724.1 AC005086.1 chr7 102188599 102188828 - pseudogene NOVEL NA 230 228 2 ENSG00000252824.1 SNORA48 chr7 102194076 102194164 - snoRNA NOVEL NA 89 89 1 ENSG00000264642.1 AC005088.1 chr7 102238321 102238406 - miRNA NOVEL NA 86 86 1 ENSG00000278586.1 CTA-313A17.5 chr7 102264706 102264979 - processed_pseudogene KNOWN OTTHUMG00000187691.1 274 274 1 ENSG00000160999.10 SH2B2 chr7 102285091 102321711 + protein_coding KNOWN OTTHUMG00000150652.5 36621 2384 16 ENSG00000264675.1 MIR4285 chr7 102293103 102293187 + miRNA KNOWN NA 85 85 1 ENSG00000170409.7 CTA-313A17.2 chr7 102327256 102329530 - unprocessed_pseudogene KNOWN OTTHUMG00000157127.2 2275 331 3 ENSG00000200552.1 Y_RNA chr7 102336869 102336970 + misc_RNA NOVEL NA 102 102 1 ENSG00000232857.2 KATNBL1P2 chr1 94650544 94651378 - processed_pseudogene KNOWN OTTHUMG00000010704.2 835 835 1 ENSG00000228546.2 CTA-313A17.3 chr7 102337316 102339115 + unprocessed_pseudogene KNOWN OTTHUMG00000157128.1 1800 374 3 ENSG00000260097.2 SPDYE6 chr7 102347206 102356444 - protein_coding KNOWN OTTHUMG00000157126.3 9239 1691 8 ENSG00000128563.12 PRKRIP1 chr7 102363872 102426676 + protein_coding KNOWN OTTHUMG00000157717.1 62805 3696 56 ENSG00000239969.4 RP11-163E9.2 chr7 102364162 102380633 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000157721.1 16472 740 14 ENSG00000239486.1 RP11-163E9.1 chr7 102380465 102382737 - unprocessed_pseudogene KNOWN OTTHUMG00000157265.2 2273 338 3 ENSG00000221510.1 MIR548O chr7 102405742 102405855 - miRNA KNOWN NA 114 114 1 ENSG00000239480.1 RP11-514P8.2 chr7 102426818 102434780 - antisense NOVEL OTTHUMG00000157724.1 7963 541 3 ENSG00000160991.14 ORAI2 chr7 102433106 102456821 + protein_coding KNOWN OTTHUMG00000157722.2 23716 11103 33 ENSG00000160993.3 ALKBH4 chr7 102456238 102464876 - protein_coding KNOWN OTTHUMG00000157720.1 8639 2312 8 ENSG00000161036.9 LRWD1 chr7 102464929 102473168 + protein_coding KNOWN OTTHUMG00000157718.16 8240 5926 57 ENSG00000244433.2 PGBD4P7 chr1 94672918 94674161 - transcribed_processed_pseudogene KNOWN OTTHUMG00000010703.2 1244 612 2 ENSG00000266715.1 MIR5090 chr7 102465742 102465826 + miRNA KNOWN NA 85 85 1 ENSG00000264471.1 MIR4467 chr7 102471469 102471531 + miRNA KNOWN NA 63 63 1 ENSG00000005075.14 POLR2J chr7 102473118 102478907 - protein_coding KNOWN OTTHUMG00000150387.1 5790 1355 7 ENSG00000271745.1 AC093668.2 chr7 102480080 102480165 + miRNA NOVEL NA 86 86 1 ENSG00000170667.13 RASA4B chr7 102482445 102517781 - protein_coding KNOWN OTTHUMG00000022944.10 35337 4840 87 ENSG00000272949.1 RP11-514P8.8 chr7 102483344 102543764 - processed_transcript NOVEL OTTHUMG00000186380.1 60421 3569 26 ENSG00000238392.1 AC093668.1 chr7 102507203 102507287 - miRNA NOVEL NA 85 85 1 ENSG00000168255.17 POLR2J3 chr7 102537918 102572656 - protein_coding KNOWN OTTHUMG00000150384.9 34739 8814 123 ENSG00000270249.1 RP11-514P8.7 chr7 102541501 102592444 - protein_coding PUTATIVE OTTHUMG00000185154.2 50944 911 7 ENSG00000205238.8 SPDYE2 chr7 102551232 102562308 + protein_coding KNOWN OTTHUMG00000150385.3 11077 2072 22 ENSG00000274778.1 AC093117.1 chr1 94676302 94676409 + miRNA NOVEL NA 108 108 1 ENSG00000105808.16 RASA4 chr7 102573807 102616757 - protein_coding KNOWN OTTHUMG00000150383.5 42951 8077 157 ENSG00000205236.6 RP11-514P8.6 chr7 102582523 102642869 - protein_coding NOVEL OTTHUMG00000180800.1 60347 3569 26 ENSG00000238997.1 AC105052.1 chr7 102606366 102606450 - miRNA NOVEL NA 85 85 1 ENSG00000267368.1 UPK3BL chr7 102637025 102642791 - protein_coding KNOWN OTTHUMG00000165036.2 5767 1342 6 ENSG00000267645.4 POLR2J2 chr7 102637049 102671660 - protein_coding NOVEL OTTHUMG00000180801.1 34612 1617 13 ENSG00000173678.13 SPDYE2B chr7 102650325 102661398 + protein_coding KNOWN OTTHUMG00000158393.3 11074 2072 22 ENSG00000228049.6 POLR2J2 chr7 102666079 102671629 - protein_coding KNOWN OTTHUMG00000150388.4 5551 1354 3 ENSG00000279168.1 HSPC047 chr7 102672879 102678856 - protein_coding KNOWN NA 5978 483 2 ENSG00000233297.4 RASA4DP chr7 102681836 102690469 - unprocessed_pseudogene KNOWN OTTHUMG00000157719.2 8634 1199 9 ENSG00000222011.7 FAM185A chr7 102748971 102809225 + protein_coding KNOWN OTTHUMG00000154140.2 60255 2729 51 ENSG00000263526.1 MIR378G chr1 94745860 94745900 - miRNA KNOWN NA 41 41 1 ENSG00000213385.3 RP11-577H5.1 chr7 102755146 102755939 + processed_pseudogene KNOWN OTTHUMG00000157259.1 794 794 1 ENSG00000161040.15 FBXL13 chr7 102813230 103074843 - protein_coding KNOWN OTTHUMG00000157224.2 261614 4009 160 ENSG00000252643.1 RNU6-1136P chr7 102834605 102834708 + snRNA KNOWN NA 104 104 1 ENSG00000238324.1 RN7SKP198 chr7 102857450 102857755 + misc_RNA KNOWN NA 306 306 1 ENSG00000128606.11 LRRC17 chr7 102912991 102944949 + protein_coding KNOWN OTTHUMG00000157210.1 31959 2674 17 ENSG00000230257.1 NFE4 chr7 102973522 102988856 + antisense NOVEL OTTHUMG00000157208.1 15335 1072 4 ENSG00000264045.1 AC073127.1 chr7 103014256 103014355 + miRNA NOVEL NA 100 100 1 ENSG00000236226.1 RP11-645N11.3 chr7 103030104 103031354 + antisense NOVEL OTTHUMG00000157223.1 1251 333 2 ENSG00000170632.12 ARMC10 chr7 103074881 103099764 + protein_coding KNOWN OTTHUMG00000157201.2 24884 4580 59 ENSG00000233025.1 CRYZP1 chr7 103088664 103089610 - processed_pseudogene KNOWN OTTHUMG00000157207.1 947 947 1 ENSG00000143036.15 SLC44A3 chr1 94820342 94895246 + protein_coding KNOWN OTTHUMG00000010700.5 74905 2869 121 ENSG00000161048.10 NAPEPLD chr7 103099776 103149560 - protein_coding KNOWN OTTHUMG00000157204.1 49785 7561 43 ENSG00000224415.1 RP11-401L13.4 chr7 103141349 103141939 - processed_pseudogene KNOWN OTTHUMG00000157209.1 591 591 1 ENSG00000236848.2 RP11-401L13.5 chr7 103152007 103152325 - processed_pseudogene KNOWN OTTHUMG00000157203.1 319 265 2 ENSG00000279482.1 RP11-401L13.7 chr7 103161947 103162660 - TEC KNOWN OTTHUMG00000173140.1 714 714 1 ENSG00000170629.13 DPY19L2P2 chr7 103175133 103280410 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000157200.1 105278 5580 115 ENSG00000237632.3 S100A11P1 chr7 103262000 103262311 + processed_pseudogene KNOWN OTTHUMG00000157211.1 312 312 1 ENSG00000105819.12 PMPCB chr7 103297422 103329511 + protein_coding KNOWN OTTHUMG00000157205.1 32090 4835 79 ENSG00000105821.13 DNAJC2 chr7 103312474 103344873 - protein_coding KNOWN OTTHUMG00000157202.2 32400 6564 98 ENSG00000161057.9 PSMC2 chr7 103344254 103369395 + protein_coding KNOWN OTTHUMG00000157206.1 25142 3538 41 ENSG00000235354.1 CTA-276O3.4 chr7 103348601 103348771 + processed_pseudogene KNOWN OTTHUMG00000157199.1 171 171 1 ENSG00000237416.5 RP11-465K1.2 chr1 94836748 94855426 - processed_transcript NOVEL OTTHUMG00000010702.2 18679 945 6 ENSG00000170615.13 SLC26A5 chr7 103352730 103446177 - protein_coding KNOWN OTTHUMG00000149911.2 93448 3377 255 ENSG00000251852.1 Y_RNA chr7 103433461 103433561 - misc_RNA NOVEL NA 101 101 1 ENSG00000252047.1 Y_RNA chr7 103434994 103435092 - misc_RNA NOVEL NA 99 99 1 ENSG00000234715.1 CTB-107G13.1 chr7 103445207 103514007 + antisense NOVEL OTTHUMG00000157225.1 68801 2725 4 ENSG00000189056.12 RELN chr7 103471784 103989516 - protein_coding KNOWN OTTHUMG00000157247.1 517733 12642 206 ENSG00000222386.1 RN7SKP86 chr7 103484208 103484539 - misc_RNA KNOWN NA 332 332 1 ENSG00000164815.9 ORC5 chr7 104126341 104208047 - protein_coding KNOWN OTTHUMG00000157275.1 81707 3724 60 ENSG00000187416.10 LHFPL3 chr7 104328656 104907232 + protein_coding KNOWN OTTHUMG00000157273.1 578577 1900 7 ENSG00000197258.5 EIF4BP6 chr7 104667749 104669576 + processed_pseudogene KNOWN OTTHUMG00000157274.1 1828 1828 1 ENSG00000226869.5 LHFPL3-AS1 chr7 104738597 104804107 - processed_transcript NOVEL OTTHUMG00000157276.2 65511 3039 34 ENSG00000117519.14 CNN3 chr1 94896949 94927278 - protein_coding KNOWN OTTHUMG00000010783.3 30330 2838 39 ENSG00000280478.1 AC079796.1 chr7 104762011 104762094 + miRNA NOVEL NA 84 84 1 ENSG00000237606.2 RP11-203P23.2 chr7 104826336 104826796 + processed_pseudogene KNOWN OTTHUMG00000157281.1 461 461 1 ENSG00000225329.2 LHFPL3-AS2 chr7 104894628 104926645 - processed_transcript KNOWN OTTHUMG00000157279.2 32018 2375 9 ENSG00000243352.3 RN7SL8P chr7 104911928 104912193 + misc_RNA KNOWN NA 266 266 1 ENSG00000237513.1 RP11-325F22.2 chr7 104941063 104962334 + lincRNA NOVEL OTTHUMG00000157277.1 21272 1034 4 ENSG00000228393.3 LINC01004 chr7 104950315 105013044 - antisense NOVEL OTTHUMG00000157278.1 62730 1131 5 ENSG00000239569.3 KMT2E-AS1 chr7 105013425 105014321 - antisense NOVEL OTTHUMG00000157280.1 897 736 2 ENSG00000280574.1 AC007384.1 chr7 105014152 105014199 - miRNA NOVEL NA 48 48 1 ENSG00000005483.18 KMT2E chr7 105014179 105114361 + protein_coding KNOWN OTTHUMG00000157403.3 100183 9233 191 ENSG00000272918.1 CTB-152G17.6 chr7 105102838 105105483 - antisense NOVEL OTTHUMG00000186296.1 2646 2646 1 ENSG00000158286.11 RNF207 chr1 6205475 6221299 + protein_coding KNOWN OTTHUMG00000001089.4 15825 6585 54 ENSG00000235501.4 RP4-639F20.1 chr1 94927566 94963270 + antisense NOVEL OTTHUMG00000010780.2 35705 1012 10 ENSG00000135250.15 SRPK2 chr7 105110704 105399308 - protein_coding KNOWN OTTHUMG00000157405.1 288605 6341 112 ENSG00000270764.1 CTB-152G17.5 chr7 105189190 105189814 + processed_pseudogene KNOWN OTTHUMG00000184442.1 625 365 2 ENSG00000271482.1 CTB-152G17.4 chr7 105204600 105204859 + processed_pseudogene KNOWN OTTHUMG00000184440.1 260 260 1 ENSG00000213361.2 RP4-778K6.1 chr7 105244652 105244970 + processed_pseudogene KNOWN OTTHUMG00000157260.1 319 319 1 ENSG00000244490.1 RWDD4P1 chr7 105301522 105302086 + processed_pseudogene KNOWN OTTHUMG00000157404.1 565 565 1 ENSG00000242154.1 RP4-778K6.3 chr7 105304277 105306642 + antisense NOVEL OTTHUMG00000157398.1 2366 546 2 ENSG00000201179.1 RNU6-1322P chr7 105332790 105332896 + snRNA KNOWN NA 107 107 1 ENSG00000091127.12 PUS7 chr7 105439661 105522267 - protein_coding KNOWN OTTHUMG00000157399.1 82607 4421 58 ENSG00000223886.3 RP11-251G23.2 chr7 105530209 105530671 + processed_pseudogene KNOWN OTTHUMG00000157402.1 463 463 1 ENSG00000135249.6 RINT1 chr7 105532085 105567677 + protein_coding KNOWN OTTHUMG00000157400.1 35593 3655 54 ENSG00000172339.9 ALG14 chr1 94974407 95072945 - protein_coding KNOWN OTTHUMG00000010781.3 98539 9633 10 ENSG00000185055.9 EFCAB10 chr7 105565120 105600875 - protein_coding KNOWN OTTHUMG00000157397.1 35756 2578 26 ENSG00000272604.1 RP11-251G23.5 chr7 105571083 105573660 + antisense NOVEL OTTHUMG00000186297.1 2578 2578 1 ENSG00000231167.3 YBX1P2 chr7 105582258 105583256 - processed_pseudogene KNOWN OTTHUMG00000157401.1 999 999 1 ENSG00000146776.13 ATXN7L1 chr7 105605067 105876604 - protein_coding KNOWN OTTHUMG00000157521.2 271538 8295 66 ENSG00000226624.1 CTA-351J1.1 chr7 105819492 105820101 + processed_pseudogene KNOWN OTTHUMG00000157261.1 610 610 1 ENSG00000128536.14 CDHR3 chr7 105876796 106033773 + protein_coding KNOWN OTTHUMG00000157520.2 156978 7087 96 ENSG00000280439.1 RP4-568B10.1 chr7 106035798 106036431 + TEC KNOWN OTTHUMG00000157519.1 634 634 1 ENSG00000008282.6 SYPL1 chr7 106090503 106112576 - protein_coding KNOWN OTTHUMG00000157587.1 22074 2794 25 ENSG00000242562.1 DCAF13P1 chr7 106125371 106126700 + processed_pseudogene KNOWN OTTHUMG00000157588.1 1330 1330 1 ENSG00000201796.1 RNU6-392P chr7 106208167 106208267 + snRNA KNOWN NA 101 101 1 ENSG00000230427.1 RP11-313A24.1 chr1 95061596 95067545 + antisense NOVEL OTTHUMG00000010779.1 5950 1096 2 ENSG00000105835.10 NAMPT chr7 106248285 106286326 - protein_coding KNOWN OTTHUMG00000140388.3 38042 9049 61 ENSG00000273320.1 RP11-22N19.2 chr7 106285480 106286326 + antisense NOVEL OTTHUMG00000186298.1 847 847 1 ENSG00000243438.1 LARP1BP2 chr7 106315225 106315743 + processed_pseudogene KNOWN OTTHUMG00000157589.1 519 519 1 ENSG00000243797.5 CTB-111H14.1 chr7 106372251 106770207 - sense_overlapping NOVEL OTTHUMG00000157591.2 397957 2082 19 ENSG00000267052.1 CTB-30L5.1 chr7 106570947 106598908 - lincRNA NOVEL OTTHUMG00000182225.1 27962 550 3 ENSG00000253276.2 CCDC71L chr7 106656765 106660996 - protein_coding KNOWN OTTHUMG00000164150.1 4232 4232 4 ENSG00000228742.8 RP5-884M6.1 chr7 106775011 106795564 + lincRNA NOVEL OTTHUMG00000157590.3 20554 3542 8 ENSG00000251978.1 RNA5SP236 chr7 106781600 106781715 - rRNA KNOWN NA 116 116 1 ENSG00000105851.9 PIK3CG chr7 106865278 106907145 + protein_coding KNOWN OTTHUMG00000157641.2 41868 5930 42 ENSG00000005249.11 PRKAR2B chr7 107044649 107161811 + protein_coding KNOWN OTTHUMG00000137418.1 117163 4318 21 ENSG00000152078.8 TMEM56 chr1 95117338 95197607 + protein_coding KNOWN OTTHUMG00000010847.1 80270 7402 24 ENSG00000243193.3 CTA-360L10.1 chr7 107066591 107133733 - processed_transcript NOVEL OTTHUMG00000157643.3 67143 2190 17 ENSG00000105856.12 HBP1 chr7 107168961 107202529 + protein_coding KNOWN OTTHUMG00000157642.2 33569 6351 80 ENSG00000272072.1 CTA-363E19.2 chr7 107192559 107193300 - antisense NOVEL OTTHUMG00000185707.1 742 742 1 ENSG00000164597.12 COG5 chr7 107201555 107564514 - protein_coding KNOWN OTTHUMG00000023895.5 362960 8467 100 ENSG00000221356.1 AC004492.1 chr7 107294885 107294951 + miRNA NOVEL NA 67 67 1 ENSG00000228341.1 CTB-20D2.1 chr7 107450083 107450362 + processed_pseudogene KNOWN OTTHUMG00000157262.1 280 280 1 ENSG00000172209.5 GPR22 chr7 107470018 107475659 + protein_coding KNOWN OTTHUMG00000154902.2 5642 3683 8 ENSG00000105865.9 DUS4L chr7 107563484 107578464 + protein_coding KNOWN OTTHUMG00000154763.4 14981 5439 56 ENSG00000272854.1 RP4-593H12.1 chr7 107579557 107580057 - antisense NOVEL OTTHUMG00000186299.1 501 501 1 ENSG00000075790.9 BCAP29 chr7 107579977 107629170 + protein_coding KNOWN OTTHUMG00000154770.14 49194 8409 104 ENSG00000271092.4 TMEM56-RWDD3 chr1 95117923 95247225 + protein_coding NOVEL OTTHUMG00000184628.1 129303 1961 12 ENSG00000238832.1 snoU109 chr7 107603363 107603507 + snoRNA NOVEL NA 145 145 1 ENSG00000250474.1 WBP1LP2 chr7 107628553 107629498 + processed_pseudogene KNOWN OTTHUMG00000154776.1 946 946 1 ENSG00000225935.1 BANF1P5 chr7 107642765 107643023 - processed_pseudogene KNOWN OTTHUMG00000154778.1 259 259 1 ENSG00000233705.5 SLC26A4-AS1 chr7 107653968 107662151 - antisense NOVEL OTTHUMG00000154777.4 8184 5029 27 ENSG00000091137.10 SLC26A4 chr7 107660635 107717809 + protein_coding KNOWN OTTHUMG00000154807.2 57175 5800 53 ENSG00000241764.3 AC002467.7 chr7 107742817 107744581 - antisense NOVEL OTTHUMG00000154805.3 1765 984 6 ENSG00000105879.10 CBLL1 chr7 107743697 107761667 + protein_coding KNOWN OTTHUMG00000154809.12 17971 5481 41 ENSG00000091138.11 SLC26A3 chr7 107765467 107803225 - protein_coding KNOWN OTTHUMG00000154812.1 37759 3382 52 ENSG00000229626.1 PIGCP2 chr7 107808734 107809568 + processed_pseudogene KNOWN OTTHUMG00000154814.1 835 835 1 ENSG00000091140.11 DLD chr7 107890970 107931730 + protein_coding KNOWN OTTHUMG00000154813.3 40761 5299 109 ENSG00000231992.1 RP11-57H12.2 chr1 95120147 95138554 + sense_intronic NOVEL OTTHUMG00000010848.1 18408 420 2 ENSG00000091136.12 LAMB1 chr7 107923799 108003255 - protein_coding KNOWN OTTHUMG00000149966.2 79457 8140 117 ENSG00000273055.1 CTB-13F3.1 chr7 107942116 107942740 + antisense NOVEL OTTHUMG00000186301.1 625 625 1 ENSG00000238297.2 U3 chr7 107999791 107999982 - snoRNA NOVEL NA 192 192 1 ENSG00000091128.11 LAMB4 chr7 108023548 108130356 - protein_coding KNOWN OTTHUMG00000154874.5 106809 7016 134 ENSG00000216085.1 AC005048.1 chr7 108036846 108036936 - miRNA NOVEL NA 91 91 1 ENSG00000091129.18 NRCAM chr7 108147623 108456717 - protein_coding KNOWN OTTHUMG00000154973.8 309095 8193 258 ENSG00000251712.2 RNU7-20P chr7 108271000 108271061 + snRNA KNOWN NA 62 62 1 ENSG00000266112.1 AC007567.1 chr7 108358307 108358405 + miRNA NOVEL NA 99 99 1 ENSG00000135241.15 PNPLA8 chr7 108470422 108569666 - protein_coding KNOWN OTTHUMG00000154870.6 99245 5668 84 ENSG00000231006.1 RPL7P32 chr7 108510233 108510976 + processed_pseudogene KNOWN OTTHUMG00000157146.1 744 744 1 ENSG00000206679.1 Y_RNA chr1 95125511 95125609 - misc_RNA NOVEL NA 99 99 1 ENSG00000177683.12 THAP5 chr7 108554543 108569750 - protein_coding KNOWN OTTHUMG00000154951.2 15208 4961 22 ENSG00000128590.4 DNAJB9 chr7 108569568 108574850 + protein_coding KNOWN OTTHUMG00000154866.1 5283 2837 7 ENSG00000225647.1 AC005487.2 chr7 108598375 108614267 + lincRNA NOVEL OTTHUMG00000154871.1 15893 665 4 ENSG00000270425.1 CTA-369K23.1 chr7 108720608 108721601 - processed_pseudogene KNOWN OTTHUMG00000184512.1 994 994 1 ENSG00000205174.4 C7orf66 chr7 108883975 108884587 - lincRNA KNOWN OTTHUMG00000154867.1 613 435 2 ENSG00000279043.1 CTB-22K14.1 chr7 108900105 108905226 - TEC KNOWN OTTHUMG00000187392.1 5122 5122 1 ENSG00000229603.1 AC004014.3 chr7 108909453 108952666 + lincRNA NOVEL OTTHUMG00000154865.1 43214 538 4 ENSG00000227968.1 AC004014.4 chr7 108994031 108995029 - processed_pseudogene KNOWN OTTHUMG00000154869.1 999 999 1 ENSG00000230941.1 AC002386.1 chr7 109322320 109326315 - lincRNA NOVEL OTTHUMG00000155012.1 3996 398 2 ENSG00000234273.1 AC073071.1 chr7 109521981 109597166 - lincRNA NOVEL OTTHUMG00000155014.1 75186 388 4 ENSG00000226026.4 RP11-57H12.3 chr1 95163219 95233982 - antisense NOVEL OTTHUMG00000010849.1 70764 2505 8 ENSG00000230192.1 AC073387.2 chr7 109660094 109660802 + processed_pseudogene KNOWN OTTHUMG00000155013.2 709 709 1 ENSG00000271368.1 RP11-10E6.1 chr7 109763574 109764357 + processed_pseudogene KNOWN OTTHUMG00000184438.1 784 784 1 ENSG00000237064.1 EIF3IP1 chr7 109959218 109960184 - processed_pseudogene KNOWN OTTHUMG00000155015.1 967 967 1 ENSG00000232199.1 RPL3P8 chr7 109998434 109999624 - processed_pseudogene KNOWN OTTHUMG00000155017.1 1191 1191 1 ENSG00000278424.1 RP11-745H7.1 chr7 110215891 110216380 + unprocessed_pseudogene KNOWN OTTHUMG00000187692.1 490 490 1 ENSG00000226965.1 AC003088.1 chr7 110432239 110534754 - lincRNA NOVEL OTTHUMG00000155021.1 102516 495 5 ENSG00000184903.8 IMMP2L chr7 110663051 111562517 - protein_coding KNOWN OTTHUMG00000155023.7 899467 3411 47 ENSG00000228540.1 AC073326.3 chr7 110724159 110725825 - sense_intronic NOVEL OTTHUMG00000155459.1 1667 557 2 ENSG00000173114.11 LRRN3 chr7 111091006 111125454 + protein_coding KNOWN OTTHUMG00000155039.2 34449 3875 15 ENSG00000243621.1 AC003989.3 chr7 111394875 111395043 + processed_pseudogene KNOWN OTTHUMG00000155038.1 169 169 1 ENSG00000122481.15 RWDD3 chr1 95234155 95247225 + protein_coding KNOWN OTTHUMG00000010910.1 13071 1982 25 ENSG00000227948.4 AC003989.4 chr7 111411319 111411883 + processed_pseudogene KNOWN OTTHUMG00000155037.1 565 565 1 ENSG00000128512.18 DOCK4 chr7 111726110 112206411 - protein_coding KNOWN OTTHUMG00000155077.6 480302 11348 314 ENSG00000225572.1 DOCK4-AS1 chr7 111808516 111821773 + antisense NOVEL OTTHUMG00000155078.2 13258 2494 2 ENSG00000222346.1 RNA5SP237 chr7 111953653 111953765 - rRNA KNOWN NA 113 113 1 ENSG00000234358.1 AC003080.4 chr7 111971222 111971988 - processed_pseudogene KNOWN OTTHUMG00000155258.1 767 767 1 ENSG00000198839.8 ZNF277 chr7 112206588 112343096 + protein_coding KNOWN OTTHUMG00000150209.3 136509 4014 50 ENSG00000202406.1 RN7SKP187 chr7 112288623 112288952 + misc_RNA KNOWN NA 330 330 1 ENSG00000226851.1 AC004112.4 chr7 112328189 112409623 - antisense NOVEL OTTHUMG00000155122.1 81435 707 7 ENSG00000230999.1 MTND5P8 chr7 112372647 112373729 + unprocessed_pseudogene KNOWN OTTHUMG00000155121.1 1083 1083 1 ENSG00000232922.1 AC004112.5 chr7 112373733 112374250 - unprocessed_pseudogene KNOWN OTTHUMG00000155123.1 518 518 1 ENSG00000228852.5 RP11-57H12.5 chr1 95243167 95278940 - antisense NOVEL OTTHUMG00000010851.4 35774 1418 16 ENSG00000236232.1 AC004112.7 chr7 112374324 112375429 + unprocessed_pseudogene KNOWN OTTHUMG00000155120.1 1106 1106 1 ENSG00000006652.12 IFRD1 chr7 112422968 112481017 + protein_coding KNOWN OTTHUMG00000155124.5 58050 7489 100 ENSG00000180019.5 AC079741.2 chr7 112446164 112446375 - processed_pseudogene KNOWN OTTHUMG00000155191.1 212 212 1 ENSG00000181016.8 LSMEM1 chr7 112480853 112491062 + protein_coding KNOWN OTTHUMG00000155190.2 10210 2592 19 ENSG00000182965.6 NPM1P14 chr7 112520488 112521670 + processed_pseudogene KNOWN OTTHUMG00000155193.1 1183 866 2 ENSG00000223646.1 AC002463.3 chr7 112622378 112708080 + lincRNA NOVEL OTTHUMG00000155194.1 85703 1188 8 ENSG00000225358.1 MIPEPP1 chr7 112735166 112738693 - processed_pseudogene KNOWN OTTHUMG00000155189.2 3528 2027 2 ENSG00000146802.11 TMEM168 chr7 112762382 112790592 - protein_coding KNOWN OTTHUMG00000155188.6 28211 7995 31 ENSG00000164603.10 C7orf60 chr7 112819147 112939916 - protein_coding KNOWN OTTHUMG00000155233.1 120770 4138 16 ENSG00000234520.4 AC018464.3 chr7 112954646 112995634 - lincRNA NOVEL OTTHUMG00000155236.1 40989 1001 11 ENSG00000116237.14 ICMT chr1 6221193 6235972 - protein_coding KNOWN OTTHUMG00000001254.2 14780 4910 17 ENSG00000228504.1 RP4-586O15.1 chr1 95310928 95318263 - lincRNA NOVEL OTTHUMG00000010911.1 7336 382 2 ENSG00000279288.1 RP11-736E3.3 chr7 113075124 113077181 - TEC KNOWN OTTHUMG00000173364.1 2058 2058 1 ENSG00000164604.11 GPR85 chr7 113078331 113087778 - protein_coding KNOWN OTTHUMG00000156933.2 9448 7396 19 ENSG00000225457.1 RP11-736E3.1 chr7 113100663 113146330 + processed_transcript NOVEL OTTHUMG00000156934.1 45668 1084 6 ENSG00000214194.7 LINC00998 chr7 113116718 113118613 - lincRNA NOVEL OTTHUMG00000154780.2 1896 1896 10 ENSG00000277061.1 AC073137.1 chr7 113345470 113345580 + miRNA NOVEL NA 111 111 1 ENSG00000270997.1 RP11-703P11.1 chr7 113415689 113416322 + processed_pseudogene KNOWN OTTHUMG00000184435.1 634 634 1 ENSG00000278894.1 RP11-786A20.1 chr7 113451072 113451402 + TEC KNOWN OTTHUMG00000187174.1 331 331 1 ENSG00000154415.6 PPP1R3A chr7 113876777 114075920 - protein_coding KNOWN OTTHUMG00000156944.1 199144 4679 13 ENSG00000128573.21 FOXP2 chr7 114086327 114693772 + protein_coding KNOWN OTTHUMG00000023131.16 607446 15782 222 ENSG00000236580.1 RP11-95P9.1 chr7 114297114 114297429 - processed_pseudogene KNOWN OTTHUMG00000156954.1 316 316 1 ENSG00000230434.1 RP11-14O19.1 chr1 95351251 95352254 - lincRNA NOVEL OTTHUMG00000010912.1 1004 602 2 ENSG00000224595.1 AC073626.2 chr7 114414244 114419875 - antisense NOVEL OTTHUMG00000133704.1 5632 582 2 ENSG00000202334.1 RNA5SP238 chr7 114613787 114613906 - rRNA KNOWN NA 120 120 1 ENSG00000266229.1 AC020606.1 chr7 114629855 114629956 + miRNA NOVEL NA 102 102 1 ENSG00000272230.1 MIR3666 chr7 114653345 114653455 + miRNA KNOWN NA 111 111 1 ENSG00000135272.8 MDFIC chr7 114922154 115019916 + protein_coding KNOWN OTTHUMG00000023647.8 97763 5966 33 ENSG00000233607.1 LINC01392 chr7 115061537 115231355 - lincRNA NOVEL OTTHUMG00000133696.1 169819 565 6 ENSG00000225535.5 LINC01393 chr7 115078958 115126314 + lincRNA NOVEL OTTHUMG00000065346.3 47357 1830 15 ENSG00000226962.1 RAC1P6 chr7 115136475 115137220 - processed_pseudogene KNOWN OTTHUMG00000065374.1 746 575 3 ENSG00000199764.1 Y_RNA chr7 115207894 115207996 - misc_RNA NOVEL NA 103 103 1 ENSG00000244565.1 RP11-222O23.1 chr7 115503367 115504081 + processed_pseudogene KNOWN OTTHUMG00000158442.1 715 408 2 ENSG00000237954.6 RP11-14O19.2 chr1 95356229 95381000 - lincRNA NOVEL OTTHUMG00000010913.3 24772 879 7 ENSG00000202377.1 SNORA25 chr7 115581315 115581442 - snoRNA NOVEL NA 128 128 1 ENSG00000242072.1 RP11-458K10.1 chr7 115647461 115676329 - lincRNA NOVEL OTTHUMG00000158448.1 28869 737 2 ENSG00000240973.1 RP11-458K10.2 chr7 115679345 115682618 - lincRNA NOVEL OTTHUMG00000158447.1 3274 1257 2 ENSG00000243345.1 RP11-458K10.3 chr7 115789729 115791049 + lincRNA NOVEL OTTHUMG00000158446.1 1321 763 3 ENSG00000199224.1 Y_RNA chr7 115833273 115833373 - misc_RNA NOVEL NA 101 101 1 ENSG00000105967.14 TFEC chr7 115935148 116159896 - protein_coding KNOWN OTTHUMG00000023518.6 224749 8644 50 ENSG00000279086.1 RP11-667F14.1 chr7 116209234 116211511 - TEC KNOWN OTTHUMG00000158457.1 2278 2278 1 ENSG00000135269.16 TES chr7 116210493 116258783 + protein_coding KNOWN OTTHUMG00000023092.8 48291 4280 40 ENSG00000243243.4 AC073130.3 chr7 116237929 116327896 - antisense NOVEL OTTHUMG00000066049.3 89968 917 7 ENSG00000237813.3 AC002066.1 chr7 116238260 116499465 - antisense NOVEL OTTHUMG00000066052.4 261206 1213 8 ENSG00000233907.1 FLJ31662 chr1 95474737 95479356 + lincRNA NOVEL OTTHUMG00000010909.1 4620 2755 4 ENSG00000281656.1 AC073130.2 chr7 116248600 116249422 - protein_coding NOVEL NA 823 48 2 ENSG00000237870.5 AC073130.1 chr7 116275606 116286734 - processed_transcript NOVEL OTTHUMG00000066051.2 11129 2560 12 ENSG00000105971.13 CAV2 chr7 116287380 116508541 + protein_coding KNOWN OTTHUMG00000023414.11 221162 6926 96 ENSG00000213167.3 Metazoa_SRP chr7 116320751 116321031 + misc_RNA NOVEL NA 281 281 1 ENSG00000105974.10 CAV1 chr7 116524785 116561184 + protein_coding KNOWN OTTHUMG00000023413.7 36400 4082 25 ENSG00000235427.1 AC006159.5 chr7 116542718 116551969 - antisense NOVEL OTTHUMG00000066050.1 9252 386 2 ENSG00000243220.1 AC006159.4 chr7 116563594 116571234 - antisense NOVEL OTTHUMG00000066048.2 7641 692 2 ENSG00000231210.2 LINC01510 chr7 116570960 116614820 - lincRNA NOVEL OTTHUMG00000064097.4 43861 941 8 ENSG00000105976.13 MET chr7 116672390 116798386 + protein_coding KNOWN OTTHUMG00000023299.8 125997 7039 67 ENSG00000198898.11 CAPZA2 chr7 116811070 116922049 + protein_coding KNOWN OTTHUMG00000023185.13 110980 8425 76 ENSG00000216037.1 AL356479.1 chr1 95504976 95505063 - miRNA NOVEL NA 88 88 1 ENSG00000235945.1 AC002543.2 chr7 116873454 116876376 - processed_pseudogene KNOWN OTTHUMG00000033983.2 2923 1954 4 ENSG00000252115.1 Y_RNA chr7 116909877 116909964 - misc_RNA NOVEL NA 88 88 1 ENSG00000222150.1 RNA5SP239 chr7 116944286 116944414 - rRNA KNOWN NA 129 129 1 ENSG00000227199.1 ST7-AS1 chr7 116952446 116954334 - antisense KNOWN OTTHUMG00000039524.1 1889 1889 1 ENSG00000275359.1 ST7-AS1_1 chr7 116952698 116952813 + misc_RNA NOVEL NA 116 116 1 ENSG00000277583.1 ST7-AS1_2 chr7 116953214 116953324 + misc_RNA NOVEL NA 111 111 1 ENSG00000004866.17 ST7 chr7 116953238 117230103 + protein_coding KNOWN OTTHUMG00000023888.22 276866 6742 284 ENSG00000214188.8 ST7-OT4 chr7 116953899 117098806 + sense_intronic KNOWN OTTHUMG00000063631.5 144908 2664 20 ENSG00000273596.1 ST7-OT4_1 chr7 116954480 116954679 + misc_RNA NOVEL NA 200 200 1 ENSG00000273571.1 ST7-OT4_2 chr7 116954983 116955154 + misc_RNA NOVEL NA 172 172 1 ENSG00000228971.2 RP11-286B14.1 chr1 95510116 95782342 + lincRNA NOVEL OTTHUMG00000010665.3 272227 2182 9 ENSG00000276100.1 ST7-OT4_3 chr7 116956431 116956723 + misc_RNA NOVEL NA 293 293 1 ENSG00000274606.1 ST7-OT4_4 chr7 116959593 116959805 + misc_RNA NOVEL NA 213 213 1 ENSG00000228368.1 AC106873.4 chr7 116965846 116967472 - antisense NOVEL OTTHUMG00000150015.1 1627 459 2 ENSG00000213050.5 TPM3P1 chr7 116972165 116972911 - processed_pseudogene KNOWN OTTHUMG00000033986.2 747 747 1 ENSG00000275870.1 MIR6132 chr7 117020211 117020319 + miRNA KNOWN NA 109 109 1 ENSG00000226367.4 ST7-AS2 chr7 117072072 117146480 - antisense KNOWN OTTHUMG00000039525.4 74409 2866 27 ENSG00000274344.1 ST7-AS2_1 chr7 117117912 117117983 + misc_RNA NOVEL NA 72 72 1 ENSG00000275054.1 ST7-OT3_1 chr7 117184126 117184199 + misc_RNA NOVEL NA 74 74 1 ENSG00000227532.1 AC002542.2 chr7 117187548 117187740 - processed_pseudogene KNOWN OTTHUMG00000132299.1 193 193 1 ENSG00000278526.1 ST7-OT3_2 chr7 117190133 117190269 + misc_RNA NOVEL NA 137 137 1 ENSG00000271252.1 RP11-286B14.2 chr1 95743096 95759470 + lincRNA NOVEL OTTHUMG00000184190.1 16375 287 2 ENSG00000278482.1 ST7-OT3_3 chr7 117191647 117191761 + misc_RNA NOVEL NA 115 115 1 ENSG00000230785.2 AC006326.3 chr7 117262918 117264888 - processed_pseudogene KNOWN OTTHUMG00000063430.3 1971 787 2 ENSG00000224042.2 MTND4P6 chr7 117263917 117264388 + processed_pseudogene KNOWN OTTHUMG00000033990.3 472 472 1 ENSG00000230605.1 AC006326.5 chr7 117264393 117264530 - processed_pseudogene KNOWN OTTHUMG00000119095.1 138 138 1 ENSG00000105989.7 WNT2 chr7 117276631 117323289 - protein_coding KNOWN OTTHUMG00000023428.4 46659 3005 15 ENSG00000238202.1 AC002465.2 chr7 117300861 117322236 + antisense NOVEL OTTHUMG00000066355.1 21376 349 2 ENSG00000154438.6 ASZ1 chr7 117363222 117428123 - protein_coding KNOWN OTTHUMG00000064565.9 64902 3065 62 ENSG00000214684.2 AC003045.1 chr7 117439982 117440780 - processed_pseudogene KNOWN OTTHUMG00000066357.2 799 713 2 ENSG00000001626.13 CFTR chr7 117465784 117715971 + protein_coding KNOWN OTTHUMG00000023076.12 250188 8517 83 ENSG00000237974.1 AC000111.4 chr7 117487737 117487929 + processed_pseudogene KNOWN OTTHUMG00000099407.1 193 193 1 ENSG00000221798.1 AC092812.1 chr1 95886540 95886626 + miRNA NOVEL NA 87 87 1 ENSG00000232661.1 AC000111.3 chr7 117560733 117564676 - antisense NOVEL OTTHUMG00000066356.1 3944 221 2 ENSG00000234001.1 AC000111.5 chr7 117586207 117586416 - processed_pseudogene KNOWN OTTHUMG00000128465.1 210 210 1 ENSG00000083622.8 AC000111.6 chr7 117604791 117647415 - antisense NOVEL OTTHUMG00000133661.2 42625 376 3 ENSG00000077063.9 CTTNBP2 chr7 117710651 117874139 - protein_coding KNOWN OTTHUMG00000022880.11 163489 7035 100 ENSG00000224136.1 AC007568.1 chr7 117882859 117883675 + processed_pseudogene KNOWN OTTHUMG00000034031.3 817 471 2 ENSG00000234826.1 AC003084.2 chr7 117998858 118004045 - lincRNA NOVEL OTTHUMG00000150172.1 5188 435 3 ENSG00000128534.6 LSM8 chr7 118184032 118192824 + protein_coding KNOWN OTTHUMG00000156956.4 8793 6210 13 ENSG00000106013.11 ANKRD7 chr7 118214673 118242731 + protein_coding KNOWN OTTHUMG00000156960.2 28059 1631 47 ENSG00000222226.1 AC006926.1 chr7 118462499 118462594 + miRNA NOVEL NA 96 96 1 ENSG00000229982.1 GTF3AP6 chr7 118880103 118881288 - processed_pseudogene KNOWN OTTHUMG00000156949.1 1186 986 2 ENSG00000237435.7 RP11-147C23.1 chr1 95937901 96022880 + lincRNA NOVEL OTTHUMG00000010691.8 84980 2016 69 ENSG00000230520.1 RP11-533K11.1 chr7 118950386 118951259 - processed_pseudogene KNOWN OTTHUMG00000156950.1 874 874 1 ENSG00000270516.1 RP11-500M10.1 chr7 119178177 119179149 - processed_pseudogene KNOWN OTTHUMG00000184511.1 973 973 1 ENSG00000263692.1 AC091320.1 chr7 119484325 119484409 - miRNA NOVEL NA 85 85 1 ENSG00000225546.4 RP11-328J2.1 chr7 119704556 119907375 - lincRNA NOVEL OTTHUMG00000156951.1 202820 1994 7 ENSG00000271739.1 U1 chr7 120005976 120006101 - snRNA NOVEL NA 126 126 1 ENSG00000276899.1 AC004915.1 chr7 120009634 120009701 - miRNA NOVEL NA 68 68 1 ENSG00000233417.1 RP4-742N3.1 chr7 120141016 120142996 - lincRNA NOVEL OTTHUMG00000156953.1 1981 469 2 ENSG00000233969.1 RP5-1006K12.1 chr7 120168345 120186064 + lincRNA NOVEL OTTHUMG00000156952.1 17720 751 3 ENSG00000281290.1 AC004946.1 chr7 120182534 120182599 - miRNA NOVEL NA 66 66 1 ENSG00000184408.8 KCND2 chr7 120273668 120750331 + protein_coding KNOWN OTTHUMG00000156989.1 476664 5555 14 ENSG00000200800.1 RNU1-130P chr1 96225901 96226060 + snRNA KNOWN NA 160 160 1 ENSG00000252023.1 RNU6-581P chr7 120672871 120672975 + snRNA KNOWN NA 105 105 1 ENSG00000231295.1 RP4-797C5.2 chr7 120746738 120752514 - antisense NOVEL OTTHUMG00000156990.1 5777 547 3 ENSG00000106025.7 TSPAN12 chr7 120787320 120858402 - protein_coding KNOWN OTTHUMG00000156980.4 71083 3368 44 ENSG00000071243.14 ING3 chr7 120950749 120977216 + protein_coding KNOWN OTTHUMG00000141270.3 26468 5214 47 ENSG00000202225.1 RNA5SP240 chr7 120981426 120981553 - rRNA KNOWN NA 128 128 1 ENSG00000106034.16 CPED1 chr7 120988677 121297444 + protein_coding KNOWN OTTHUMG00000156982.4 308768 7705 100 ENSG00000234927.1 HMGN1P18 chr7 121050927 121051203 + processed_pseudogene KNOWN OTTHUMG00000156981.1 277 277 1 ENSG00000212628.1 RNA5SP241 chr7 121083700 121083813 - rRNA KNOWN NA 114 114 1 ENSG00000207090.1 RNU6-517P chr7 121194948 121195057 - snRNA KNOWN NA 110 110 1 ENSG00000002745.11 WNT16 chr7 121325367 121341104 + protein_coding KNOWN OTTHUMG00000156963.1 15738 3261 8 ENSG00000225077.2 LINC00337 chr1 6236240 6239444 + lincRNA KNOWN OTTHUMG00000001255.4 3205 1685 7 ENSG00000231987.1 RP5-898J17.1 chr1 96254069 96374125 - lincRNA NOVEL OTTHUMG00000010690.2 120057 1994 6 ENSG00000196937.9 FAM3C chr7 121348851 121396364 - protein_coding KNOWN OTTHUMG00000156979.1 47514 3422 31 ENSG00000213310.3 CYCSP19 chr7 121398452 121398767 + processed_pseudogene KNOWN OTTHUMG00000157004.1 316 316 1 ENSG00000227371.1 RP11-3L10.2 chr7 121419072 121419845 + processed_pseudogene KNOWN OTTHUMG00000157003.1 774 418 2 ENSG00000234985.2 RP11-3L10.3 chr7 121440834 121441261 - processed_pseudogene KNOWN OTTHUMG00000157002.3 428 428 1 ENSG00000221690.1 AC004875.1 chr7 121574669 121574754 - miRNA NOVEL NA 86 86 1 ENSG00000227743.1 RP4-745K6.1 chr7 121643334 121650360 - lincRNA NOVEL OTTHUMG00000157001.1 7027 378 3 ENSG00000252704.1 RN7SKP277 chr7 121736443 121736725 + misc_RNA KNOWN NA 283 283 1 ENSG00000233272.1 PNPT1P2 chr7 121842368 121845131 - processed_pseudogene KNOWN OTTHUMG00000157056.1 2764 2050 4 ENSG00000106278.10 PTPRZ1 chr7 121873089 122062036 + protein_coding KNOWN OTTHUMG00000157057.1 188948 9917 78 ENSG00000008311.13 AASS chr7 122075647 122144280 - protein_coding KNOWN OTTHUMG00000157058.1 68634 4591 118 ENSG00000225923.1 RP4-736I12.1 chr1 96390652 96391393 + processed_pseudogene KNOWN OTTHUMG00000010711.1 742 742 1 ENSG00000252003.1 RNU7-154P chr7 122081720 122081781 + snRNA KNOWN NA 62 62 1 ENSG00000226636.1 RP5-1049N15.2 chr7 122159300 122162243 + processed_pseudogene KNOWN OTTHUMG00000157059.1 2944 1854 3 ENSG00000234418.1 RP11-560I19.1 chr7 122216347 122218437 + lincRNA NOVEL OTTHUMG00000157098.1 2091 472 3 ENSG00000213302.3 RP11-560I19.2 chr7 122234531 122234903 + processed_pseudogene KNOWN OTTHUMG00000157101.1 373 373 1 ENSG00000128610.10 FEZF1 chr7 122301394 122310691 - protein_coding KNOWN OTTHUMG00000157091.1 9298 2612 11 ENSG00000230316.5 FEZF1-AS1 chr7 122303658 122310077 + antisense NOVEL OTTHUMG00000157095.1 6420 3313 11 ENSG00000081803.14 CADPS2 chr7 122318425 122886759 - protein_coding KNOWN OTTHUMG00000157093.2 568335 6351 188 ENSG00000240499.6 RP5-1101C3.1 chr7 122328469 122440388 + antisense NOVEL OTTHUMG00000157094.7 111920 3458 80 ENSG00000225795.1 RP11-395G17.1 chr7 122676580 122676811 + processed_pseudogene KNOWN OTTHUMG00000157096.1 232 232 1 ENSG00000235459.5 RPS26P31 chr7 122681315 122681662 + processed_pseudogene KNOWN OTTHUMG00000157100.1 348 348 1 ENSG00000234422.1 UBE2WP1 chr1 96418594 96418933 + processed_pseudogene KNOWN OTTHUMG00000010709.1 340 340 1 ENSG00000188050.2 RNF133 chr7 122697712 122699156 - protein_coding KNOWN OTTHUMG00000157092.1 1445 1445 1 ENSG00000235631.1 RNF148 chr7 122701664 122702967 - protein_coding KNOWN OTTHUMG00000157099.1 1304 1304 4 ENSG00000227573.2 RP5-1166A24.1 chr7 122849746 122850352 + processed_pseudogene KNOWN OTTHUMG00000157097.2 607 607 1 ENSG00000128519.3 TAS2R16 chr7 122994704 122995700 - protein_coding KNOWN OTTHUMG00000157090.1 997 997 1 ENSG00000226680.2 RP11-61D3.1 chr7 123069249 123103589 - lincRNA NOVEL OTTHUMG00000157089.2 34341 505 4 ENSG00000081800.7 SLC13A1 chr7 123113531 123199986 - protein_coding KNOWN OTTHUMG00000157087.1 86456 4415 65 ENSG00000223595.1 LYPLA1P1 chr7 123230120 123230741 - processed_pseudogene KNOWN OTTHUMG00000157088.1 622 622 1 ENSG00000164675.9 IQUB chr7 123452400 123535077 - protein_coding KNOWN OTTHUMG00000157347.1 82678 5893 60 ENSG00000232524.1 RP11-332K15.1 chr7 123456629 123459856 + antisense NOVEL OTTHUMG00000157116.1 3228 451 3 ENSG00000207338.1 RNU6-296P chr7 123457988 123458094 - snRNA KNOWN NA 107 107 1 ENSG00000228502.1 EEF1A1P11 chr1 96446930 96448318 + processed_pseudogene KNOWN OTTHUMG00000010710.1 1389 1389 1 ENSG00000128609.13 NDUFA5 chr7 123536997 123558255 - protein_coding KNOWN OTTHUMG00000157348.2 21259 9851 48 ENSG00000146809.11 ASB15 chr7 123567010 123639481 + protein_coding KNOWN OTTHUMG00000157114.6 72472 4879 70 ENSG00000230442.4 RP11-390E23.3 chr7 123584859 123624957 - antisense NOVEL OTTHUMG00000157115.1 40099 1727 18 ENSG00000170807.11 LMOD2 chr7 123655807 123664290 + protein_coding KNOWN OTTHUMG00000157149.2 8484 2731 5 ENSG00000106299.7 WASL chr7 123681935 123749067 - protein_coding KNOWN OTTHUMG00000157346.2 67133 4435 11 ENSG00000272686.1 RP11-390E23.6 chr7 123749068 123751166 + antisense NOVEL OTTHUMG00000186321.1 2099 2099 1 ENSG00000201104.1 RNU6-11P chr7 123790605 123790711 - snRNA KNOWN NA 107 107 1 ENSG00000228211.2 HYALP1 chr7 123814139 123829252 + unitary_pseudogene KNOWN OTTHUMG00000154764.1 15114 1279 3 ENSG00000106302.8 HYAL4 chr7 123828983 123877478 + protein_coding KNOWN OTTHUMG00000157349.1 48496 2738 23 ENSG00000106304.14 SPAM1 chr7 123925237 123971414 + protein_coding KNOWN OTTHUMG00000157284.2 46178 3032 32 ENSG00000241992.3 RN7SL831P chr1 96583209 96583527 + misc_RNA KNOWN NA 319 319 1 ENSG00000225583.1 RP4-630C24.1 chr7 123932132 123932459 + processed_pseudogene KNOWN OTTHUMG00000157283.1 328 328 1 ENSG00000241345.1 RP4-630C24.3 chr7 123994622 124027659 + antisense NOVEL OTTHUMG00000157317.1 33038 2064 7 ENSG00000234224.2 TMEM229A chr7 124030916 124033023 - protein_coding KNOWN OTTHUMG00000154762.3 2108 2108 1 ENSG00000242593.4 RP5-921G16.1 chr7 124032205 124395118 + antisense NOVEL OTTHUMG00000157321.1 362914 4713 12 ENSG00000243574.1 RP11-264K23.1 chr7 124274679 124287544 - lincRNA NOVEL OTTHUMG00000157319.1 12866 650 2 ENSG00000241324.1 RP5-921G16.2 chr7 124337380 124349860 - lincRNA NOVEL OTTHUMG00000157320.1 12481 254 3 ENSG00000230268.3 SSU72P8 chr7 124476371 124476955 + processed_pseudogene KNOWN OTTHUMG00000157318.1 585 585 1 ENSG00000213296.4 RP5-1106E3.1 chr7 124480524 124481395 + processed_pseudogene KNOWN OTTHUMG00000157212.2 872 872 1 ENSG00000207214.1 RNU6-102P chr7 124647719 124647822 + snRNA KNOWN NA 104 104 1 ENSG00000279419.1 RP5-907C10.3 chr7 124742312 124745017 - TEC KNOWN OTTHUMG00000173330.1 2706 2706 1 ENSG00000234226.5 NDUFS5P2 chr1 96584422 96584727 - processed_pseudogene KNOWN OTTHUMG00000010687.2 306 306 1 ENSG00000170775.2 GPR37 chr7 124745997 124765627 - protein_coding KNOWN OTTHUMG00000157197.1 19631 3021 2 ENSG00000275356.2 RP5-907C10.4 chr7 124777292 124790810 - protein_coding NOVEL OTTHUMG00000189249.1 13519 669 8 ENSG00000128513.13 POT1 chr7 124822386 124929983 - protein_coding KNOWN OTTHUMG00000157194.6 107598 5897 142 ENSG00000224897.5 POT1-AS1 chr7 124929873 125179315 + antisense NOVEL OTTHUMG00000157170.1 249443 6304 36 ENSG00000186676.3 EEF1GP1 chr7 125033453 125035301 + processed_pseudogene KNOWN OTTHUMG00000157167.1 1849 1299 3 ENSG00000224899.1 RP11-3B12.5 chr7 125151326 125153611 - lincRNA NOVEL OTTHUMG00000157196.1 2286 600 2 ENSG00000205898.3 RP11-3B12.4 chr7 125159974 125160547 - processed_pseudogene KNOWN OTTHUMG00000157198.1 574 574 1 ENSG00000237764.2 RP11-3B12.2 chr7 125172218 125379321 + lincRNA NOVEL OTTHUMG00000157169.2 207104 1453 10 ENSG00000219445.2 RP11-3B12.3 chr7 125229579 125264291 - lincRNA NOVEL OTTHUMG00000157195.1 34713 1918 5 ENSG00000213291.3 RP11-420H19.3 chr7 125300504 125300878 - processed_pseudogene KNOWN OTTHUMG00000157166.2 375 375 1 ENSG00000137970.7 RPL7P9 chr1 96678874 96679620 - processed_pseudogene KNOWN OTTHUMG00000010686.1 747 747 1 ENSG00000234071.1 RP11-420H19.1 chr7 125344969 125345377 + processed_pseudogene KNOWN OTTHUMG00000157165.1 409 409 1 ENSG00000227847.1 RP11-420H19.2 chr7 125345825 125346197 + processed_pseudogene KNOWN OTTHUMG00000157168.2 373 373 1 ENSG00000227869.1 RP11-807H17.1 chr7 125431347 125466401 + lincRNA NOVEL OTTHUMG00000157154.1 35055 955 8 ENSG00000197462.3 AC005276.1 chr7 125917871 125933832 + lincRNA NOVEL OTTHUMG00000157151.2 15962 837 5 ENSG00000221418.1 AC003968.1 chr7 126040229 126040300 + miRNA NOVEL NA 72 72 1 ENSG00000241921.1 AC000370.2 chr7 126378970 126424185 + antisense NOVEL OTTHUMG00000157729.2 45216 646 7 ENSG00000179603.16 GRM8 chr7 126438598 127253294 - protein_coding KNOWN OTTHUMG00000022888.9 814697 6457 93 ENSG00000227249.1 AC000374.1 chr7 126511135 126512879 + processed_pseudogene KNOWN OTTHUMG00000066224.1 1745 1745 1 ENSG00000224981.1 AC000367.1 chr7 126868767 126870532 - processed_pseudogene KNOWN OTTHUMG00000128877.2 1766 1766 1 ENSG00000230820.2 AC000362.1 chr7 126980967 126981778 + processed_pseudogene KNOWN OTTHUMG00000034029.2 812 425 2 ENSG00000223229.1 RN7SKP270 chr1 96695856 96696167 - misc_RNA KNOWN NA 312 312 1 ENSG00000207692.2 MIR592 chr7 127058079 127058187 - miRNA KNOWN NA 109 109 1 ENSG00000280995.1 AC000354.1 chr7 127120442 127120546 - miRNA NOVEL NA 105 105 1 ENSG00000236340.4 AC000099.1 chr7 127215127 127229921 + antisense NOVEL OTTHUMG00000063970.2 14795 1912 5 ENSG00000236105.1 AC000110.1 chr7 127295620 127296203 + processed_pseudogene KNOWN OTTHUMG00000034030.2 584 584 1 ENSG00000048405.8 ZNF800 chr7 127346790 127431924 - protein_coding KNOWN OTTHUMG00000023456.5 85135 5793 40 ENSG00000279265.1 AC000123.3 chr7 127349833 127350293 - TEC KNOWN OTTHUMG00000066283.1 461 461 1 ENSG00000224138.1 AC000123.4 chr7 127350128 127351523 + antisense NOVEL OTTHUMG00000148663.1 1396 516 2 ENSG00000280347.1 AC000123.2 chr7 127359785 127364759 - TEC KNOWN OTTHUMG00000066284.1 4975 4975 1 ENSG00000226770.1 AC000124.1 chr7 127476883 127485804 + lincRNA NOVEL OTTHUMG00000064344.2 8922 957 4 ENSG00000179562.2 GCC1 chr7 127580618 127593611 - protein_coding KNOWN OTTHUMG00000023590.3 12994 4987 9 ENSG00000117569.17 PTBP2 chr1 96721665 96823738 + protein_coding KNOWN OTTHUMG00000010685.2 102074 12937 106 ENSG00000004059.9 ARF5 chr7 127588345 127591705 + protein_coding KNOWN OTTHUMG00000023246.5 3361 1871 26 ENSG00000106328.9 FSCN3 chr7 127591409 127602144 + protein_coding KNOWN OTTHUMG00000022935.5 10736 3214 18 ENSG00000106331.13 PAX4 chr7 127610292 127615928 - protein_coding KNOWN OTTHUMG00000157562.4 5637 2596 59 ENSG00000240790.1 AC073934.6 chr7 127644685 127652012 - antisense NOVEL OTTHUMG00000157565.1 7328 495 3 ENSG00000197157.9 SND1 chr7 127652180 128092609 + protein_coding KNOWN OTTHUMG00000157560.1 440430 6500 91 ENSG00000240579.1 RP11-20L24.1 chr7 127857852 127858488 - processed_pseudogene KNOWN OTTHUMG00000157561.1 637 637 1 ENSG00000279078.1 SND1-IT1 chr7 127997597 128000077 + lincRNA KNOWN OTTHUMG00000189460.1 2481 2481 1 ENSG00000128594.6 LRRC4 chr7 128027071 128032107 - protein_coding KNOWN OTTHUMG00000157563.1 5037 4036 10 ENSG00000207588.1 MIR593 chr7 128081861 128081960 + miRNA KNOWN NA 100 100 1 ENSG00000207705.1 MIR129-1 chr7 128207871 128207943 + miRNA KNOWN NA 73 73 1 ENSG00000212039.1 AL592205.1 chr1 96902699 96902792 + miRNA NOVEL NA 94 94 1 ENSG00000174697.4 LEP chr7 128241284 128257628 + protein_coding KNOWN OTTHUMG00000157564.1 16345 3420 3 ENSG00000272915.1 RP11-62J1.4 chr7 128264526 128264889 - lincRNA NOVEL OTTHUMG00000186322.1 364 364 1 ENSG00000221429.1 AC018635.1 chr7 128290004 128290091 + miRNA NOVEL NA 88 88 1 ENSG00000106344.7 RBM28 chr7 128297685 128343908 - protein_coding KNOWN OTTHUMG00000157711.2 46224 15866 62 ENSG00000242261.1 RP11-62J1.3 chr7 128306649 128307678 + processed_pseudogene KNOWN OTTHUMG00000157710.1 1030 1030 1 ENSG00000238750.1 RNU7-27P chr7 128344081 128344142 + snRNA KNOWN NA 62 62 1 ENSG00000224940.7 PRRT4 chr7 128350325 128361685 - protein_coding KNOWN OTTHUMG00000157714.2 11361 3683 31 ENSG00000106348.15 IMPDH1 chr7 128392277 128410252 - protein_coding KNOWN OTTHUMG00000157713.2 17976 3662 187 ENSG00000228700.1 RP11-155G14.1 chr7 128433422 128433713 - processed_pseudogene KNOWN OTTHUMG00000157249.1 292 292 1 ENSG00000279916.1 AC010655.1 chr7 128441694 128442726 - protein_coding KNOWN NA 1033 66 3 ENSG00000173673.7 HES3 chr1 6244192 6245578 + protein_coding KNOWN OTTHUMG00000001271.3 1387 697 4 ENSG00000265771.1 AL592205.2 chr1 96935545 96935663 + miRNA NOVEL NA 119 119 1 ENSG00000238590.1 RNU7-54P chr7 128443449 128443510 - snRNA KNOWN NA 62 62 1 ENSG00000273184.1 RP11-212P7.3 chr7 128455840 128493859 + processed_transcript NOVEL OTTHUMG00000186387.1 38020 707 5 ENSG00000135245.9 HILPDA chr7 128455849 128458418 + protein_coding KNOWN OTTHUMG00000157712.1 2570 2070 8 ENSG00000240758.2 RP11-155G14.6 chr7 128455937 128469197 + processed_transcript NOVEL OTTHUMG00000186396.1 13261 662 4 ENSG00000272601.1 RP11-155G14.5 chr7 128466563 128469171 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000157715.1 2609 450 2 ENSG00000165055.14 METTL2B chr7 128476729 128506602 + protein_coding KNOWN OTTHUMG00000143738.2 29874 6749 45 ENSG00000276988.1 Metazoa_SRP chr7 128483907 128484158 - misc_RNA NOVEL NA 252 252 1 ENSG00000273270.1 RP11-212P7.2 chr7 128524016 128531069 - lincRNA NOVEL OTTHUMG00000186328.1 7054 7054 1 ENSG00000280828.1 RP11-274B21.1 chr7 128533652 128615970 + unprocessed_pseudogene KNOWN OTTHUMG00000158229.2 82319 829 9 ENSG00000213280.2 RP11-212P7.1 chr7 128570241 128570688 - processed_pseudogene KNOWN OTTHUMG00000157248.1 448 448 1 ENSG00000188641.11 DPYD chr1 97077743 97921049 - protein_coding KNOWN OTTHUMG00000039683.4 843307 6443 36 ENSG00000242588.5 RP11-274B21.14 chr7 128574751 128622694 + processed_transcript NOVEL OTTHUMG00000189725.2 47944 1107 10 ENSG00000281896.1 RP11-274B21.13 chr7 128617865 128625905 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000189726.1 8041 281 3 ENSG00000223189.1 RNU6-177P chr7 128627172 128627275 + snRNA KNOWN NA 104 104 1 ENSG00000243302.3 RP11-274B21.2 chr7 128651185 128652334 + processed_pseudogene KNOWN OTTHUMG00000158227.1 1150 1150 1 ENSG00000230715.3 RP11-274B21.4 chr7 128652841 128653243 + processed_pseudogene KNOWN OTTHUMG00000158226.1 403 403 1 ENSG00000229413.2 RP11-274B21.12 chr7 128653690 128654019 - processed_pseudogene KNOWN OTTHUMG00000186795.1 330 330 1 ENSG00000243679.1 RP11-274B21.3 chr7 128653969 128654722 + processed_pseudogene KNOWN OTTHUMG00000158228.1 754 754 1 ENSG00000281490.1 CICP14 chr7 128655962 128658791 - processed_pseudogene KNOWN OTTHUMG00000184505.2 2830 2732 2 ENSG00000271553.1 RP11-274B21.10 chr7 128667043 128668156 + lincRNA NOVEL OTTHUMG00000184226.1 1114 1114 1 ENSG00000241493.1 RP11-274B21.5 chr7 128669087 128669892 - processed_pseudogene KNOWN OTTHUMG00000158272.1 806 132 2 ENSG00000232878.2 DPYD-AS1 chr1 97095923 97322955 + antisense NOVEL OTTHUMG00000039682.2 227033 1479 9 ENSG00000205085.7 FAM71F2 chr7 128672288 128687872 + protein_coding KNOWN OTTHUMG00000158275.2 15585 5875 27 ENSG00000271344.1 RP11-274B21.9 chr7 128690451 128691717 + lincRNA NOVEL OTTHUMG00000184225.1 1267 1267 1 ENSG00000239722.1 IMP3P2 chr7 128693450 128693924 + processed_pseudogene KNOWN OTTHUMG00000158273.2 475 475 1 ENSG00000201041.1 RNA5SP242 chr7 128697439 128697556 + rRNA KNOWN NA 118 118 1 ENSG00000252866.1 RNA5SP243 chr7 128697710 128697744 + rRNA KNOWN NA 35 35 1 ENSG00000135248.14 FAM71F1 chr7 128709061 128731743 + protein_coding KNOWN OTTHUMG00000158276.3 22683 2521 54 ENSG00000128595.15 CALU chr7 128739292 128771807 + protein_coding KNOWN OTTHUMG00000158274.3 32516 4537 41 ENSG00000244218.3 RN7SL81P chr7 128761338 128761598 + misc_RNA KNOWN NA 261 261 1 ENSG00000128617.2 OPN1SW chr7 128772491 128775790 - protein_coding KNOWN OTTHUMG00000158311.1 3300 1096 5 ENSG00000128596.15 CCDC136 chr7 128790757 128822132 + protein_coding KNOWN OTTHUMG00000158310.2 31376 6188 109 ENSG00000232542.1 DPYD-IT1 chr1 97394154 97420141 - sense_intronic NOVEL OTTHUMG00000039679.1 25988 401 2 ENSG00000128591.14 FLNC chr7 128830377 128859274 + protein_coding KNOWN OTTHUMG00000023627.3 28898 9280 99 ENSG00000242902.1 RP11-309L24.2 chr7 128850162 128862626 - antisense NOVEL OTTHUMG00000158366.1 12465 559 4 ENSG00000135253.12 KCP chr7 128862451 128910719 - protein_coding KNOWN OTTHUMG00000158363.6 48269 8259 200 ENSG00000128524.4 ATP6V1F chr7 128862826 128865844 + protein_coding KNOWN OTTHUMG00000158365.1 3019 789 5 ENSG00000272899.2 RP11-309L24.4 chr7 128866579 128872044 + lincRNA NOVEL OTTHUMG00000158367.2 5466 3631 2 ENSG00000221401.1 AC025594.1 chr7 128906772 128906890 + miRNA NOVEL NA 119 119 1 ENSG00000224163.4 RP11-309L24.6 chr7 128912732 128914063 - unprocessed_pseudogene KNOWN OTTHUMG00000158408.1 1332 543 3 ENSG00000128604.17 IRF5 chr7 128937612 128950035 + protein_coding KNOWN OTTHUMG00000158410.1 12424 4375 99 ENSG00000275106.1 RP11-309L24.10 chr7 128952527 128953316 - lincRNA NOVEL OTTHUMG00000186757.1 790 790 1 ENSG00000064419.12 TNPO3 chr7 128954180 129055173 - protein_coding KNOWN OTTHUMG00000158409.3 100994 4676 114 ENSG00000228057.1 SEC63P1 chr1 97545701 97546958 + processed_pseudogene KNOWN OTTHUMG00000039678.1 1258 1258 1 ENSG00000242241.3 RN7SL306P chr7 128970734 128971029 + misc_RNA KNOWN NA 296 296 1 ENSG00000244556.1 ODCP chr7 129028889 129030527 + processed_pseudogene KNOWN OTTHUMG00000158406.1 1639 1639 1 ENSG00000230359.4 TPI1P2 chr7 129056019 129056770 + processed_pseudogene KNOWN OTTHUMG00000158411.2 752 752 1 ENSG00000242162.1 RP11-128A6.3 chr7 129066021 129066462 - processed_pseudogene KNOWN OTTHUMG00000158407.1 442 442 1 ENSG00000241102.1 RP11-286H14.2 chr7 129095301 129095811 - processed_pseudogene KNOWN OTTHUMG00000158424.1 511 359 2 ENSG00000241573.1 RP11-286H14.1 chr7 129096027 129096735 - processed_pseudogene KNOWN OTTHUMG00000158423.1 709 395 2 ENSG00000240416.1 CYCSP20 chr7 129117513 129117827 - processed_pseudogene KNOWN OTTHUMG00000158419.1 315 315 1 ENSG00000230626.3 RP11-286H14.4 chr7 129126518 129130793 + transcribed_processed_pseudogene KNOWN OTTHUMG00000158418.1 4276 1347 3 ENSG00000158457.5 TSPAN33 chr7 129144892 129169697 + protein_coding KNOWN OTTHUMG00000158420.3 24806 2750 16 ENSG00000200629.1 RNY1P11 chr7 129164849 129164961 + misc_RNA KNOWN NA 113 113 1 ENSG00000226128.1 RPL26P9 chr1 97585862 97586294 + processed_pseudogene KNOWN OTTHUMG00000039677.1 433 433 1 ENSG00000128602.8 SMO chr7 129188872 129213545 + protein_coding KNOWN OTTHUMG00000158421.2 24674 4311 25 ENSG00000243230.1 RP11-286H14.8 chr7 129209775 129213545 - antisense NOVEL OTTHUMG00000158425.1 3771 535 2 ENSG00000158467.15 AHCYL2 chr7 129225023 129430211 + protein_coding KNOWN OTTHUMG00000157677.4 205189 6858 115 ENSG00000238072.1 RP11-305M3.2 chr7 129410113 129410370 - processed_pseudogene KNOWN OTTHUMG00000157697.1 258 258 1 ENSG00000128578.8 STRIP2 chr7 129434433 129488399 + protein_coding KNOWN OTTHUMG00000157695.1 53967 5876 45 ENSG00000239919.1 SNRPGP3 chr7 129477875 129478101 + processed_pseudogene KNOWN OTTHUMG00000157694.1 227 227 1 ENSG00000199846.1 RNU1-72P chr7 129484504 129484656 + snRNA KNOWN NA 153 153 1 ENSG00000240204.2 SMKR1 chr7 129502479 129512932 + protein_coding KNOWN OTTHUMG00000157696.3 10454 1035 4 ENSG00000273329.1 RP11-448A19.1 chr7 129604548 129611630 - lincRNA NOVEL OTTHUMG00000186330.1 7083 7083 1 ENSG00000106459.13 NRF1 chr7 129611714 129757082 + protein_coding KNOWN OTTHUMG00000143736.1 145369 4125 67 ENSG00000230718.1 RP11-272L13.2 chr1 97774669 97775026 + processed_pseudogene KNOWN OTTHUMG00000039681.1 358 358 1 ENSG00000212238.1 RNA5SP244 chr7 129756266 129756377 + rRNA KNOWN NA 112 112 1 ENSG00000207990.2 MIR182 chr7 129770379 129770490 - miRNA KNOWN NA 112 112 1 ENSG00000199158.1 MIR96 chr7 129774692 129774769 - miRNA KNOWN NA 78 78 1 ENSG00000207691.1 MIR183 chr7 129774905 129775014 - miRNA KNOWN NA 110 110 1 ENSG00000242078.1 RP11-738B7.1 chr7 129783370 129785185 - lincRNA NOVEL OTTHUMG00000157659.1 1816 305 3 ENSG00000186591.10 UBE2H chr7 129830732 129952949 - protein_coding KNOWN OTTHUMG00000157650.3 122218 6392 46 ENSG00000244036.3 RP11-306G20.1 chr7 129953234 130026989 + antisense NOVEL OTTHUMG00000157652.3 73756 1533 7 ENSG00000199516.1 Y_RNA chr7 129954693 129954794 + misc_RNA NOVEL NA 102 102 1 ENSG00000091732.14 ZC3HC1 chr7 130018286 130051451 - protein_coding KNOWN OTTHUMG00000157648.1 33166 3011 82 ENSG00000201109.1 RNA5SP245 chr7 130027277 130027397 + rRNA KNOWN NA 121 121 1 ENSG00000235777.1 DPYD-AS2 chr1 97796921 97798066 + antisense NOVEL OTTHUMG00000039680.1 1146 974 5 ENSG00000128607.12 KLHDC10 chr7 130070510 130135720 + protein_coding KNOWN OTTHUMG00000157654.2 65211 6622 22 ENSG00000229196.3 RP11-775D22.2 chr7 130141731 130142615 + antisense NOVEL OTTHUMG00000157651.1 885 503 4 ENSG00000146842.15 TMEM209 chr7 130164715 130207770 - protein_coding KNOWN OTTHUMG00000157653.1 43056 4759 57 ENSG00000240571.1 RP11-775D22.3 chr7 130173718 130205361 + antisense NOVEL OTTHUMG00000157649.1 31644 575 5 ENSG00000165120.3 SSMEM1 chr7 130207860 130216843 + protein_coding KNOWN OTTHUMG00000157844.1 8984 1159 3 ENSG00000270992.1 RP11-190G13.4 chr7 130255902 130262770 + processed_pseudogene KNOWN OTTHUMG00000184430.1 6869 432 2 ENSG00000158516.10 CPA2 chr7 130266827 130289798 + protein_coding KNOWN OTTHUMG00000157019.2 22972 1829 31 ENSG00000128510.9 CPA4 chr7 130293134 130324180 + protein_coding KNOWN OTTHUMG00000157825.3 31047 3958 71 ENSG00000158525.14 CPA5 chr7 130344816 130368730 + protein_coding KNOWN OTTHUMG00000157824.2 23915 2965 95 ENSG00000091704.8 CPA1 chr7 130380339 130388114 + protein_coding KNOWN OTTHUMG00000157826.10 7776 2921 52 ENSG00000270911.1 RP11-272L13.4 chr1 97855575 97856825 + processed_pseudogene KNOWN OTTHUMG00000184295.1 1251 1251 1 ENSG00000106477.17 CEP41 chr7 130393771 130442433 - protein_coding KNOWN OTTHUMG00000157823.5 48663 12566 109 ENSG00000259920.1 RP11-2E11.5 chr7 130481491 130484392 - lincRNA NOVEL OTTHUMG00000173197.1 2902 2902 1 ENSG00000272701.2 MESTIT1 chr7 130486042 130491033 - antisense KNOWN OTTHUMG00000186331.2 4992 4118 2 ENSG00000106484.13 MEST chr7 130486171 130506296 + protein_coding KNOWN OTTHUMG00000156661.17 20126 4631 137 ENSG00000277269.1 MESTIT1_1 chr7 130487483 130487622 + misc_RNA NOVEL NA 140 140 1 ENSG00000278055.1 MESTIT1_2 chr7 130488304 130488538 + misc_RNA NOVEL NA 235 235 1 ENSG00000274500.1 MESTIT1_3 chr7 130489868 130489966 + misc_RNA NOVEL NA 99 99 1 ENSG00000270823.1 RP11-2E11.6 chr7 130495794 130498427 - antisense NOVEL OTTHUMG00000185221.1 2634 2634 1 ENSG00000199043.1 MIR335 chr7 130496111 130496204 + miRNA KNOWN NA 94 94 1 ENSG00000158623.13 COPG2 chr7 130506238 130668748 - protein_coding KNOWN OTTHUMG00000155364.4 162511 4139 59 ENSG00000269998.1 RP11-272L13.3 chr1 97933474 97941746 - lincRNA NOVEL OTTHUMG00000183916.1 8273 870 2 ENSG00000270953.1 RP11-2E11.9 chr7 130507660 130508282 + antisense NOVEL OTTHUMG00000185222.1 623 623 1 ENSG00000239021.1 RNA5SP246 chr7 130602795 130602913 - rRNA KNOWN NA 119 119 1 ENSG00000226045.1 AC009274.6 chr7 130645225 130645594 - processed_pseudogene KNOWN OTTHUMG00000155036.1 370 370 1 ENSG00000213265.7 TSGA13 chr7 130668648 130687432 - protein_coding KNOWN OTTHUMG00000154999.38 18785 2259 28 ENSG00000266265.2 KLF14 chr7 130731235 130734061 - protein_coding KNOWN OTTHUMG00000188298.1 2827 2827 1 ENSG00000271522.1 RP11-36B6.1 chr7 130790208 130791724 + lincRNA NOVEL OTTHUMG00000185223.1 1517 1517 1 ENSG00000229858.2 AC016831.5 chr7 130822868 130823219 - processed_pseudogene KNOWN OTTHUMG00000155004.1 352 352 1 ENSG00000240680.1 AC016831.3 chr7 130823205 130823511 - processed_pseudogene KNOWN OTTHUMG00000155003.1 307 307 1 ENSG00000232716.2 AC016831.6 chr7 130840204 130843725 - processed_pseudogene KNOWN OTTHUMG00000155011.3 3522 1723 5 ENSG00000233559.1 AC016831.7 chr7 130853720 130928649 + lincRNA NOVEL OTTHUMG00000155022.1 74930 1616 5 ENSG00000158292.6 GPR153 chr1 6247346 6260975 - protein_coding KNOWN OTTHUMG00000001272.2 13630 4082 6 ENSG00000259946.1 RP11-490G2.2 chr1 97967005 97968814 - lincRNA NOVEL OTTHUMG00000175887.1 1810 1810 1 ENSG00000277934.2 MIR29A chr7 130876735 130876821 - miRNA KNOWN NA 87 87 1 ENSG00000226380.6 AC058791.1 chr7 130876809 130913310 - lincRNA NOVEL OTTHUMG00000043895.7 36502 6619 11 ENSG00000274250.1 MIR29B1 chr7 130877459 130877539 - miRNA KNOWN NA 81 81 1 ENSG00000271204.1 RP11-138A9.1 chr7 130930209 130932206 - lincRNA NOVEL OTTHUMG00000185224.1 1998 1998 1 ENSG00000273319.1 RP11-138A9.2 chr7 130936464 130939661 + lincRNA NOVEL OTTHUMG00000186335.1 3198 3198 1 ENSG00000231721.5 LINC-PINT chr7 130941760 131110176 - antisense KNOWN OTTHUMG00000155000.2 168417 4515 34 ENSG00000199627.1 RNU6-1010P chr7 131054886 131054992 - snRNA KNOWN NA 107 107 1 ENSG00000128585.16 MKLN1 chr7 131110096 131496636 + protein_coding KNOWN OTTHUMG00000154880.5 386541 12878 109 ENSG00000233287.1 AC009362.2 chr7 131242590 131242995 + processed_pseudogene KNOWN OTTHUMG00000155005.1 406 406 1 ENSG00000236753.4 MKLN1-AS chr7 131309744 131328222 - processed_transcript NOVEL OTTHUMG00000154998.3 18479 2715 25 ENSG00000225206.5 MIR137HG chr1 97988000 98049863 - lincRNA KNOWN OTTHUMG00000010680.2 61864 4746 10 ENSG00000273489.1 RP11-180C16.1 chr7 131493964 131497694 - antisense NOVEL OTTHUMG00000186336.1 3731 3731 1 ENSG00000128567.15 PODXL chr7 131500262 131558217 - protein_coding KNOWN OTTHUMG00000154918.4 57956 6874 38 ENSG00000224545.1 AC008264.4 chr7 131520137 131520503 + processed_pseudogene KNOWN OTTHUMG00000154919.1 367 367 1 ENSG00000213261.3 EEF1B2P6 chr7 131661952 131662624 - processed_pseudogene KNOWN OTTHUMG00000155056.1 673 673 1 ENSG00000236238.2 AC093106.4 chr7 131665507 131665858 + processed_pseudogene KNOWN OTTHUMG00000155052.2 352 352 1 ENSG00000236395.1 AC093106.6 chr7 131702269 131702653 - processed_pseudogene KNOWN OTTHUMG00000155055.1 385 385 1 ENSG00000236281.1 AC093106.5 chr7 131753746 131754252 - processed_pseudogene KNOWN OTTHUMG00000155054.1 507 507 1 ENSG00000252811.1 AC008085.1 chr7 131852680 131852774 - miRNA NOVEL NA 95 95 1 ENSG00000233263.1 AC009518.2 chr7 131892616 131893615 - processed_pseudogene KNOWN OTTHUMG00000155043.3 1000 731 2 ENSG00000236386.1 AC009518.3 chr7 131893822 131894074 + processed_pseudogene KNOWN OTTHUMG00000155042.2 253 253 1 ENSG00000276280.1 MIR2682 chr1 98045242 98045351 - miRNA KNOWN NA 110 110 1 ENSG00000224865.6 AC009518.4 chr7 131897641 131948953 + lincRNA NOVEL OTTHUMG00000155053.2 51313 1601 9 ENSG00000229532.1 AC105443.2 chr7 132086266 132087992 + processed_pseudogene KNOWN OTTHUMG00000155107.4 1727 712 3 ENSG00000221866.8 PLXNA4 chr7 132123332 132648688 - protein_coding KNOWN OTTHUMG00000155108.3 525357 16372 75 ENSG00000225144.2 AC018643.4 chr7 132264152 132271269 + antisense NOVEL OTTHUMG00000155196.2 7118 414 3 ENSG00000223436.1 AC011625.1 chr7 132352334 132367976 + antisense NOVEL OTTHUMG00000155198.1 15643 526 3 ENSG00000183470.8 FLJ40288 chr7 132648794 132728769 + lincRNA NOVEL OTTHUMG00000150507.5 79976 2442 9 ENSG00000201009.1 SNORD46 chr7 132753023 132753126 + snoRNA NOVEL NA 104 104 1 ENSG00000225881.1 AC009365.4 chr7 132758970 132760632 + antisense NOVEL OTTHUMG00000155197.1 1663 751 2 ENSG00000106554.10 CHCHD3 chr7 132784868 133082088 - protein_coding KNOWN OTTHUMG00000155231.1 297221 3718 54 ENSG00000227197.1 AC009518.8 chr7 132830693 132849593 + antisense NOVEL OTTHUMG00000155195.1 18901 799 4 ENSG00000277990.1 MIR137 chr1 98046070 98046171 - miRNA KNOWN NA 102 102 1 ENSG00000272393.1 U6 chr7 133082829 133082932 + snRNA NOVEL NA 104 104 1 ENSG00000237821.1 AC083873.4 chr7 133169416 133170514 - processed_pseudogene KNOWN OTTHUMG00000155200.1 1099 1099 1 ENSG00000131558.13 EXOC4 chr7 133253073 134066589 + protein_coding KNOWN OTTHUMG00000155259.4 813517 9466 112 ENSG00000238844.1 AC083875.1 chr7 133262640 133262730 - miRNA NOVEL NA 91 91 1 ENSG00000276137.1 MIR6133 chr7 133290881 133290988 + miRNA KNOWN NA 108 108 1 ENSG00000235429.1 AC083875.2 chr7 133315009 133315413 - processed_pseudogene KNOWN OTTHUMG00000155232.1 405 405 1 ENSG00000235967.1 COX5BP3 chr7 133727368 133727734 - processed_pseudogene KNOWN OTTHUMG00000155234.1 367 367 1 ENSG00000226205.1 AC007790.4 chr7 133732493 133733595 - processed_pseudogene KNOWN OTTHUMG00000155265.3 1103 782 2 ENSG00000155530.2 LRGUK chr7 134127299 134264591 + protein_coding KNOWN OTTHUMG00000155320.2 137293 3249 24 ENSG00000231098.1 AC008154.4 chr7 134284500 134286055 + antisense NOVEL OTTHUMG00000155377.1 1556 414 2 ENSG00000233557.2 NFU1P2 chr1 98077000 98077468 + processed_pseudogene KNOWN OTTHUMG00000010679.2 469 469 1 ENSG00000205060.9 SLC35B4 chr7 134289332 134317051 - protein_coding KNOWN OTTHUMG00000155321.3 27720 7109 29 ENSG00000229177.1 AC008154.5 chr7 134346071 134350791 - lincRNA NOVEL OTTHUMG00000155590.1 4721 327 2 ENSG00000273297.1 RP11-38M8.1 chr7 134416290 134432453 - lincRNA NOVEL OTTHUMG00000186342.1 16164 1205 8 ENSG00000085662.12 AKR1B1 chr7 134442350 134459284 - protein_coding KNOWN OTTHUMG00000155322.5 16935 3660 74 ENSG00000198074.8 AKR1B10 chr7 134527592 134541408 + protein_coding KNOWN OTTHUMG00000155356.3 13817 1744 25 ENSG00000227471.7 AKR1B15 chr7 134549136 134579875 + protein_coding KNOWN OTTHUMG00000155376.2 30740 3325 25 ENSG00000172331.10 BPGM chr7 134646808 134679813 + protein_coding KNOWN OTTHUMG00000155380.1 33006 2539 13 ENSG00000224375.1 AC009276.4 chr7 134684144 134687990 + lincRNA NOVEL OTTHUMG00000155405.1 3847 253 3 ENSG00000230101.5 TUBB3P2 chr7 134734898 134735129 - processed_pseudogene KNOWN OTTHUMG00000155458.1 232 232 1 ENSG00000122786.18 CALD1 chr7 134744252 134970728 + protein_coding KNOWN OTTHUMG00000155407.8 226477 9843 188 ENSG00000226053.1 RP5-1070A16.1 chr1 98210747 98272658 + lincRNA NOVEL OTTHUMG00000010681.1 61912 2229 3 ENSG00000146856.13 AGBL3 chr7 134986508 135147963 + protein_coding KNOWN OTTHUMG00000155406.4 161456 7307 66 ENSG00000122783.15 C7orf49 chr7 135092363 135170795 - protein_coding KNOWN OTTHUMG00000155447.4 78433 5321 45 ENSG00000223500.1 AC083862.6 chr7 135128444 135129685 + processed_pseudogene KNOWN OTTHUMG00000155416.1 1242 1242 1 ENSG00000146859.6 TMEM140 chr7 135148072 135166215 + protein_coding KNOWN OTTHUMG00000155413.2 18144 2313 4 ENSG00000272941.1 RP11-134L10.1 chr7 135168403 135169547 + antisense NOVEL OTTHUMG00000186343.1 1145 1145 1 ENSG00000105875.12 WDR91 chr7 135183839 135211534 - protein_coding KNOWN OTTHUMG00000155414.3 27696 6032 65 ENSG00000231794.4 AC009542.2 chr7 135198401 135209837 + antisense NOVEL OTTHUMG00000155446.4 11437 2503 13 ENSG00000277138.1 MIR6509 chr7 135206994 135207078 - miRNA KNOWN NA 85 85 1 ENSG00000146857.3 STRA8 chr7 135231979 135258492 + protein_coding KNOWN OTTHUMG00000155415.1 26514 993 9 ENSG00000276067.1 RP11-260N14.1 chr7 135270017 135277409 - unprocessed_pseudogene KNOWN OTTHUMG00000187701.1 7393 693 5 ENSG00000221777.1 AL160056.1 chr1 98373385 98373499 + miRNA NOVEL NA 115 115 1 ENSG00000080802.17 CNOT4 chr7 135361795 135510127 - protein_coding KNOWN OTTHUMG00000155568.4 148333 6999 102 ENSG00000227073.1 SDHDP2 chr7 135444461 135444925 + processed_pseudogene KNOWN OTTHUMG00000155494.2 465 465 1 ENSG00000155561.13 NUP205 chr7 135557919 135648757 + protein_coding KNOWN OTTHUMG00000155497.3 90839 7619 118 ENSG00000271414.1 RP11-751K21.1 chr7 135650972 135651416 + processed_pseudogene KNOWN OTTHUMG00000184427.1 445 445 1 ENSG00000223718.3 AC093107.7 chr7 135660039 135660647 + processed_pseudogene KNOWN OTTHUMG00000155496.1 609 609 1 ENSG00000243317.6 C7orf73 chr7 135662496 135693418 + protein_coding KNOWN OTTHUMG00000155495.6 30923 4930 12 ENSG00000212303.1 RNU6-1154P chr7 135665599 135665702 - snRNA KNOWN NA 104 104 1 ENSG00000164707.14 SLC13A4 chr7 135681237 135729258 - protein_coding KNOWN OTTHUMG00000155539.2 48022 8015 45 ENSG00000273219.1 RP11-644N4.1 chr7 135704537 135704841 + antisense NOVEL OTTHUMG00000186345.1 305 305 1 ENSG00000189320.7 FAM180A chr7 135728348 135748846 - protein_coding KNOWN OTTHUMG00000155537.3 20499 2526 14 ENSG00000280040.1 RP11-296E3.2 chr1 98660388 98661059 - TEC KNOWN OTTHUMG00000186070.1 672 672 1 ENSG00000222219.1 AC091736.1 chr7 135798006 135798109 - miRNA NOVEL NA 104 104 1 ENSG00000224746.1 AC015987.1 chr7 135926455 135932881 + antisense NOVEL OTTHUMG00000155616.1 6427 804 2 ENSG00000105887.10 MTPN chr7 135926761 135977353 - protein_coding KNOWN OTTHUMG00000155627.1 50593 3775 6 ENSG00000267697.1 LUZP6 chr7 135927274 135927450 - protein_coding KNOWN OTTHUMG00000180445.1 177 177 1 ENSG00000199700.1 RNU6-223P chr7 135960703 135960809 + snRNA KNOWN NA 107 107 1 ENSG00000230649.2 AC024084.1 chr7 136025761 136084668 + lincRNA NOVEL OTTHUMG00000155617.2 58908 455 4 ENSG00000274268.1 AC024084.2 chr7 136052813 136052917 + miRNA NOVEL NA 105 105 1 ENSG00000232053.5 AC009784.3 chr7 136092925 136437426 + lincRNA NOVEL OTTHUMG00000155618.3 344502 1285 15 ENSG00000206705.1 Y_RNA chr7 136129980 136130081 - misc_RNA NOVEL NA 102 102 1 ENSG00000220982.3 AC009784.1 chr7 136244444 136244536 + miRNA NOVEL NA 93 93 1 ENSG00000162627.15 SNX7 chr1 98661701 98760500 + protein_coding KNOWN OTTHUMG00000010723.4 98800 2067 33 ENSG00000236503.1 AC009784.4 chr7 136262558 136263017 - processed_pseudogene KNOWN OTTHUMG00000155626.1 460 460 1 ENSG00000226066.1 AC009541.1 chr7 136485656 136488317 + processed_pseudogene KNOWN OTTHUMG00000155635.1 2662 2662 1 ENSG00000234352.8 AC009264.1 chr7 136685559 137182107 - antisense NOVEL OTTHUMG00000155657.6 496549 6913 34 ENSG00000231244.1 PSMC1P3 chr7 136713871 136715188 + processed_pseudogene KNOWN OTTHUMG00000155634.1 1318 1318 1 ENSG00000181072.10 CHRM2 chr7 136868669 137020255 + protein_coding KNOWN OTTHUMG00000155658.2 151587 8322 23 ENSG00000207597.1 MIR490 chr7 136903167 136903294 + miRNA KNOWN NA 128 128 1 ENSG00000223657.2 KRT8P51 chr7 136938280 136938553 - processed_pseudogene KNOWN OTTHUMG00000155656.1 274 274 1 ENSG00000224469.1 AC009517.2 chr7 137164043 137164612 + processed_pseudogene KNOWN OTTHUMG00000155655.1 570 570 1 ENSG00000105894.10 PTN chr7 137227341 137343865 - protein_coding KNOWN OTTHUMG00000155709.2 116525 1713 11 ENSG00000202023.1 SNORD81 chr7 137287687 137287762 + snoRNA NOVEL NA 76 76 1 ENSG00000117598.10 LPPR5 chr1 98890245 99005032 - protein_coding KNOWN OTTHUMG00000010738.3 114788 4571 14 ENSG00000231114.1 AC078842.4 chr7 137318592 137326953 + lincRNA NOVEL OTTHUMG00000155710.2 8362 1890 4 ENSG00000228031.2 AC078842.3 chr7 137344930 137354483 - lincRNA NOVEL OTTHUMG00000155708.2 9554 553 4 ENSG00000157680.14 DGKI chr7 137381037 137847092 - protein_coding KNOWN OTTHUMG00000155697.5 466056 15549 209 ENSG00000279483.1 RPL41 chr7 137513832 137514238 + protein_coding KNOWN NA 407 407 1 ENSG00000230383.1 AC009245.3 chr7 137721985 137722846 + processed_pseudogene KNOWN OTTHUMG00000155695.1 862 862 1 ENSG00000182158.13 CREB3L2 chr7 137874979 138002067 - protein_coding KNOWN OTTHUMG00000155744.3 127089 8788 54 ENSG00000237243.1 AC022173.2 chr7 137953348 137957966 + antisense NOVEL OTTHUMG00000155696.1 4619 577 4 ENSG00000122787.13 AKR1D1 chr7 138002324 138117986 + protein_coding KNOWN OTTHUMG00000155787.5 115663 3093 40 ENSG00000234639.1 AC009263.2 chr7 138022458 138024339 + processed_pseudogene KNOWN OTTHUMG00000155741.2 1882 1239 3 ENSG00000231923.1 AC024082.3 chr7 138046654 138047897 + processed_pseudogene KNOWN OTTHUMG00000155785.2 1244 699 2 ENSG00000097021.18 ACOT7 chr1 6264269 6394391 - protein_coding KNOWN OTTHUMG00000001295.7 130123 4124 85 ENSG00000232825.1 RP5-896L10.1 chr1 99004276 99148852 + antisense NOVEL OTTHUMG00000010766.2 144577 2544 3 ENSG00000231931.1 AC024082.4 chr7 138060056 138060293 + processed_pseudogene KNOWN OTTHUMG00000155788.2 238 238 1 ENSG00000221558.2 AC024082.1 chr7 138068542 138068629 - miRNA NOVEL NA 88 88 1 ENSG00000222514.1 RN7SKP223 chr7 138091254 138091315 + misc_RNA KNOWN NA 62 62 1 ENSG00000233951.3 RCC2P3 chr7 138122202 138124595 + processed_pseudogene KNOWN OTTHUMG00000155790.5 2394 1537 3 ENSG00000266193.1 MIR4468 chr7 138123758 138123821 + miRNA KNOWN NA 64 64 1 ENSG00000225559.1 AC083867.4 chr7 138163440 138164637 + lincRNA NOVEL OTTHUMG00000155789.1 1198 457 2 ENSG00000252820.1 Y_RNA chr7 138175045 138175136 + misc_RNA NOVEL NA 92 92 1 ENSG00000201465.1 SNORA51 chr7 138187998 138188129 - snoRNA NOVEL NA 132 132 1 ENSG00000213238.6 AC008155.2 chr7 138298088 138298484 - processed_pseudogene KNOWN OTTHUMG00000155875.2 397 397 1 ENSG00000213237.4 AC008155.1 chr7 138404195 138404523 - processed_pseudogene KNOWN OTTHUMG00000155876.1 329 329 1 ENSG00000227034.1 RP11-234N17.1 chr1 99008218 99008474 + processed_pseudogene KNOWN OTTHUMG00000010721.1 257 257 1 ENSG00000281271.1 Y_RNA chr7 138415480 138415574 + misc_RNA NOVEL NA 95 95 1 ENSG00000214815.2 AC008265.2 chr7 138440690 138442238 + processed_pseudogene KNOWN OTTHUMG00000155791.1 1549 1549 1 ENSG00000122779.15 TRIM24 chr7 138460334 138589993 + protein_coding KNOWN OTTHUMG00000155820.4 129660 9223 86 ENSG00000234995.1 AC013429.5 chr7 138490581 138491361 - processed_pseudogene KNOWN OTTHUMG00000155871.1 781 781 1 ENSG00000157703.14 SVOPL chr7 138594285 138701352 - protein_coding KNOWN OTTHUMG00000155870.5 107068 6302 69 ENSG00000252188.1 SNORA40 chr7 138625060 138625179 - snoRNA NOVEL NA 120 120 1 ENSG00000234658.1 AC013429.4 chr7 138645671 138646448 - processed_pseudogene KNOWN OTTHUMG00000155874.3 778 422 2 ENSG00000243099.1 AC020983.5 chr7 138688980 138689522 + processed_pseudogene KNOWN OTTHUMG00000155873.1 543 543 1 ENSG00000223721.3 UQCRFS1P2 chr7 138701607 138703062 + processed_pseudogene KNOWN OTTHUMG00000155872.2 1456 722 2 ENSG00000105929.14 ATP6V0A4 chr7 138706295 138799560 - protein_coding KNOWN OTTHUMG00000157122.2 93266 4034 81 ENSG00000117600.11 LPPR4 chr1 99263953 99309590 + protein_coding KNOWN OTTHUMG00000010763.2 45638 5540 17 ENSG00000214128.9 TMEM213 chr7 138797952 138838101 + protein_coding KNOWN OTTHUMG00000157182.2 40150 4813 13 ENSG00000122778.8 KIAA1549 chr7 138831381 138981318 - protein_coding KNOWN OTTHUMG00000157214.2 149938 12427 40 ENSG00000199646.1 RNU6-1272P chr7 138876359 138876465 - snRNA KNOWN NA 107 107 1 ENSG00000146858.7 ZC3HAV1L chr7 139025706 139036029 - protein_coding KNOWN OTTHUMG00000157229.2 10324 1753 5 ENSG00000105939.11 ZC3HAV1 chr7 139043520 139109719 - protein_coding KNOWN OTTHUMG00000157471.1 66200 8235 41 ENSG00000229677.1 RP11-383F6.1 chr7 139049456 139050006 - processed_pseudogene KNOWN OTTHUMG00000157246.1 551 551 1 ENSG00000105948.12 TTC26 chr7 139133744 139191986 + protein_coding KNOWN OTTHUMG00000157472.3 58243 4999 133 ENSG00000239254.1 RP11-365F18.3 chr7 139172516 139174266 - processed_pseudogene KNOWN OTTHUMG00000157624.1 1751 1751 1 ENSG00000271537.1 RP11-365F18.6 chr7 139198557 139199142 - processed_pseudogene KNOWN OTTHUMG00000184502.1 586 586 1 ENSG00000228360.1 RP11-365F18.1 chr7 139227537 139227828 - processed_pseudogene KNOWN OTTHUMG00000157245.1 292 275 2 ENSG00000233983.2 RP4-735N21.1 chr1 99464378 99464776 + processed_pseudogene KNOWN OTTHUMG00000010765.2 399 399 1 ENSG00000271404.1 MZT1P2 chr7 139228221 139228605 + processed_pseudogene KNOWN OTTHUMG00000184423.1 385 248 2 ENSG00000157741.13 UBN2 chr7 139230356 139308236 + protein_coding KNOWN OTTHUMG00000157623.4 77881 16386 35 ENSG00000206843.1 RNU6-206P chr7 139315291 139315394 - snRNA KNOWN NA 104 104 1 ENSG00000164898.11 C7orf55 chr7 139339457 139346319 + protein_coding KNOWN OTTHUMG00000151719.1 6863 1524 11 ENSG00000146963.16 C7orf55-LUC7L2 chr7 139340359 139423457 + protein_coding KNOWN OTTHUMG00000185163.2 83099 6316 79 ENSG00000269955.2 LUC7L2 chr7 139341360 139422599 + protein_coding KNOWN OTTHUMG00000151717.3 81240 1661 11 ENSG00000273391.1 RP11-634H22.1 chr7 139359032 139359566 - antisense NOVEL OTTHUMG00000186346.1 535 535 1 ENSG00000252332.1 RNU6-911P chr7 139448740 139448843 + snRNA KNOWN NA 104 104 1 ENSG00000188883.4 KLRG2 chr7 139452690 139483712 - protein_coding KNOWN OTTHUMG00000157705.2 31023 2197 7 ENSG00000253183.1 RP4-701O16.5 chr7 139502453 139503812 + processed_pseudogene KNOWN OTTHUMG00000164899.2 1360 1360 1 ENSG00000224445.2 RP11-413P11.1 chr1 99472415 99534015 - lincRNA NOVEL OTTHUMG00000010769.2 61601 442 4 ENSG00000236279.5 CLEC2L chr7 139523856 139544984 + protein_coding KNOWN OTTHUMG00000164900.1 21129 2527 12 ENSG00000254270.1 ERHP1 chr7 139534240 139534549 + processed_pseudogene KNOWN OTTHUMG00000164901.1 310 310 1 ENSG00000064393.14 HIPK2 chr7 139561570 139777778 - protein_coding KNOWN OTTHUMG00000157704.3 216209 15402 41 ENSG00000059377.14 TBXAS1 chr7 139777051 140020325 + protein_coding KNOWN OTTHUMG00000157302.6 243275 6271 192 ENSG00000059378.11 PARP12 chr7 140023744 140063721 - protein_coding KNOWN OTTHUMG00000157315.1 39978 6285 66 ENSG00000006459.9 KDM7A chr7 140084746 140177035 - protein_coding KNOWN OTTHUMG00000157327.1 92290 9430 35 ENSG00000251728.1 Y_RNA chr7 140094697 140094792 - misc_RNA NOVEL NA 96 96 1 ENSG00000260231.1 JHDM1D-AS1 chr7 140177261 140179640 + antisense NOVEL OTTHUMG00000173155.1 2380 2380 1 ENSG00000199971.1 RNU6-797P chr7 140209563 140209671 - snRNA KNOWN NA 109 109 1 ENSG00000199283.1 RNU1-58P chr7 140241870 140242032 + snRNA KNOWN NA 163 163 1 ENSG00000099260.9 PALMD chr1 99645943 99694541 + protein_coding KNOWN OTTHUMG00000010764.2 48599 8244 30 ENSG00000270512.1 RP5-1136G2.1 chr7 140282465 140282920 + processed_pseudogene KNOWN OTTHUMG00000184420.1 456 456 1 ENSG00000241661.1 PPP1R2P6 chr7 140292752 140293339 + processed_pseudogene KNOWN OTTHUMG00000157342.1 588 588 1 ENSG00000157800.16 SLC37A3 chr7 140293693 140404433 - protein_coding KNOWN OTTHUMG00000157343.4 110741 10588 169 ENSG00000223113.1 RNA5SP247 chr7 140370441 140370545 + rRNA KNOWN NA 105 105 1 ENSG00000202472.1 RNA5SP248 chr7 140386781 140386907 - rRNA KNOWN NA 127 127 1 ENSG00000146955.9 RAB19 chr7 140404043 140426250 + protein_coding KNOWN OTTHUMG00000157410.1 22208 997 11 ENSG00000103200.6 RP11-723C11.2 chr7 140435316 140435787 - processed_pseudogene KNOWN OTTHUMG00000157408.2 472 472 1 ENSG00000133606.9 MKRN1 chr7 140453040 140479569 - protein_coding KNOWN OTTHUMG00000157412.4 26530 5869 83 ENSG00000146966.11 DENND2A chr7 140518420 140673993 - protein_coding KNOWN OTTHUMG00000157411.1 155574 5148 105 ENSG00000221732.1 AC006452.1 chr7 140580287 140580349 + miRNA NOVEL NA 63 63 1 ENSG00000223656.1 HMGB3P10 chr1 99698242 99699178 + processed_pseudogene KNOWN OTTHUMG00000010767.1 937 572 2 ENSG00000201354.1 Y_RNA chr7 140609847 140609955 + misc_RNA NOVEL NA 109 109 1 ENSG00000240173.3 RN7SL771P chr7 140645829 140646126 + misc_RNA KNOWN NA 298 298 1 ENSG00000280499.1 AC006452.2 chr7 140645966 140646034 + miRNA NOVEL NA 69 69 1 ENSG00000133597.8 ADCK2 chr7 140673153 140696261 + protein_coding KNOWN OTTHUMG00000157409.1 23109 2913 38 ENSG00000090266.11 NDUFB2 chr7 140690777 140722790 + protein_coding KNOWN OTTHUMG00000157424.2 32014 4447 59 ENSG00000240889.1 NDUFB2-AS1 chr7 140695336 140697077 - antisense NOVEL OTTHUMG00000157407.1 1742 1648 2 ENSG00000157764.11 BRAF chr7 140719327 140924764 - protein_coding KNOWN OTTHUMG00000157457.2 205438 10380 56 ENSG00000271932.1 U6 chr7 140884072 140884178 + snRNA NOVEL NA 107 107 1 ENSG00000271611.1 RP4-813F11.3 chr7 140934867 140935010 + processed_pseudogene KNOWN OTTHUMG00000184419.1 144 144 1 ENSG00000242703.1 CCT4P1 chr7 140997952 140999800 - processed_pseudogene KNOWN OTTHUMG00000157458.1 1849 1558 2 ENSG00000156869.11 FRRS1 chr1 99708703 99766631 - protein_coding KNOWN OTTHUMG00000010768.3 57929 3868 27 ENSG00000090263.14 MRPS33 chr7 141002610 141015228 - protein_coding KNOWN OTTHUMG00000157456.2 12619 5262 23 ENSG00000223212.1 RNU4-74P chr7 141052249 141052409 + snRNA KNOWN NA 161 161 1 ENSG00000261115.4 TMEM178B chr7 141074232 141480380 + protein_coding KNOWN OTTHUMG00000172737.9 406149 10656 12 ENSG00000261778.1 RP5-1173P7.1 chr7 141173043 141173216 - processed_pseudogene KNOWN OTTHUMG00000172759.1 174 174 1 ENSG00000261624.1 RP5-914M6.1 chr7 141351977 141352768 + processed_pseudogene KNOWN OTTHUMG00000172760.1 792 478 2 ENSG00000204990.3 RP5-842K16.1 chr7 141414383 141416390 - lincRNA NOVEL OTTHUMG00000157467.1 2008 1439 2 ENSG00000261629.1 RP5-842K16.2 chr7 141429711 141431268 - antisense NOVEL OTTHUMG00000172761.1 1558 596 2 ENSG00000261797.1 RP11-744I24.3 chr7 141512698 141513183 - lincRNA NOVEL OTTHUMG00000172762.1 486 385 2 ENSG00000261570.1 RP11-744I24.2 chr7 141529203 141551304 - antisense NOVEL OTTHUMG00000172763.1 22102 631 6 ENSG00000006530.14 AGK chr7 141551189 141655244 + protein_coding KNOWN OTTHUMG00000157499.1 104056 6547 95 ENSG00000201491.1 RNU4-75P chr1 99784740 99784885 - snRNA KNOWN NA 146 146 1 ENSG00000244701.1 RP5-894A10.2 chr7 141652381 141656810 - antisense NOVEL OTTHUMG00000157537.1 4430 770 2 ENSG00000257093.5 KIAA1147 chr7 141656728 141702153 - protein_coding KNOWN OTTHUMG00000157539.1 45426 7356 18 ENSG00000270157.1 RP5-894A10.6 chr7 141662922 141663846 - sense_intronic NOVEL OTTHUMG00000184086.1 925 925 1 ENSG00000228775.6 WEE2-AS1 chr7 141704338 141738346 - antisense NOVEL OTTHUMG00000157538.1 34009 3504 46 ENSG00000214102.6 WEE2 chr7 141708353 141731271 + protein_coding KNOWN OTTHUMG00000157536.1 22919 3061 18 ENSG00000212153.1 RNU1-82P chr7 141727984 141728148 + snRNA KNOWN NA 165 165 1 ENSG00000106028.9 SSBP1 chr7 141738321 141787922 + protein_coding KNOWN OTTHUMG00000157572.2 49602 4988 87 ENSG00000127362.2 TAS2R3 chr7 141764097 141765197 + protein_coding KNOWN OTTHUMG00000157637.1 1101 1101 1 ENSG00000127364.3 TAS2R4 chr7 141778442 141780819 + protein_coding KNOWN OTTHUMG00000157634.1 2378 2378 1 ENSG00000270923.1 TAS2R6P chr7 141787815 141788640 + processed_pseudogene KNOWN OTTHUMG00000184995.1 826 826 1 ENSG00000202254.1 Y_RNA chr1 99791662 99791753 + misc_RNA NOVEL NA 92 92 1 ENSG00000127366.5 TAS2R5 chr7 141790217 141791367 + protein_coding KNOWN OTTHUMG00000157632.1 1151 1151 1 ENSG00000241926.1 RP5-1154E9.7 chr7 141801315 141802059 - processed_pseudogene KNOWN OTTHUMG00000157633.1 745 745 1 ENSG00000224354.2 MTND2P5 chr7 141802482 141803487 - processed_pseudogene KNOWN OTTHUMG00000157636.1 1006 1006 1 ENSG00000239648.1 MTND1P3 chr7 141803701 141804652 - processed_pseudogene KNOWN OTTHUMG00000157635.1 952 952 1 ENSG00000240677.1 MYL6P4 chr7 141811805 141812257 + processed_pseudogene KNOWN OTTHUMG00000157638.1 453 453 1 ENSG00000165076.12 PRSS37 chr7 141836286 141841487 - protein_coding KNOWN OTTHUMG00000157174.1 5202 2203 23 ENSG00000240031.1 OR9A3P chr7 141862860 141863737 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000158371.3 878 878 2 ENSG00000237621.3 OR9A1P chr7 141887148 141888092 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000158540.2 945 945 2 ENSG00000257335.7 MGAM chr7 141907813 142106747 + protein_coding KNOWN OTTHUMG00000158395.9 198935 10767 188 ENSG00000244292.1 OR9N1P chr7 141911217 141911943 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000158369.3 727 727 2 ENSG00000271746.1 RP1-202O8.3 chr1 6393555 6394391 + antisense NOVEL OTTHUMG00000185645.1 837 837 1 ENSG00000231996.1 RP4-581O6.1 chr1 99842610 99842761 + processed_pseudogene KNOWN OTTHUMG00000010806.1 152 152 1 ENSG00000258083.1 OR9A4 chr7 141918817 141919909 + protein_coding KNOWN OTTHUMG00000158370.3 1093 1093 1 ENSG00000258227.5 CLEC5A chr7 141927357 141947007 - protein_coding KNOWN OTTHUMG00000157173.1 19651 4129 31 ENSG00000257138.1 TAS2R38 chr7 141972631 141973773 - protein_coding KNOWN OTTHUMG00000158374.2 1143 1143 1 ENSG00000257743.7 RP11-1220K2.2 chr7 142111749 142222324 + protein_coding KNOWN OTTHUMG00000158558.7 110576 8162 83 ENSG00000240268.5 MOXD2P chr7 142240740 142247067 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000158566.3 6328 1590 17 ENSG00000258223.5 PRSS58 chr7 142252143 142258058 - protein_coding KNOWN OTTHUMG00000158565.3 5916 1155 11 ENSG00000186163.8 TRY2P chr7 142265833 142272235 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000154634.5 6403 2319 7 ENSG00000241881.1 U66059.58 chr7 142285750 142288869 + lincRNA NOVEL OTTHUMG00000158567.3 3120 384 2 ENSG00000277083.1 PRSS3P3 chr7 142287251 142291597 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000158568.4 4347 983 8 ENSG00000242736.1 TRBV1 chr7 142299177 142299460 + TR_V_pseudogene KNOWN OTTHUMG00000158515.1 284 284 1 ENSG00000162688.14 AGL chr1 99850084 99924023 + protein_coding KNOWN OTTHUMG00000010803.1 73940 8434 239 ENSG00000226660.2 TRBV2 chr7 142300924 142301432 + TR_V_gene KNOWN OTTHUMG00000158532.4 509 421 2 ENSG00000237702.2 TRBV3-1 chr7 142308542 142309048 + TR_V_gene KNOWN OTTHUMG00000158526.1 507 391 2 ENSG00000211710.3 TRBV4-1 chr7 142313184 142313666 + TR_V_gene KNOWN OTTHUMG00000158522.3 483 373 2 ENSG00000211734.3 TRBV5-1 chr7 142320677 142321544 + TR_V_gene KNOWN OTTHUMG00000158520.1 868 652 3 ENSG00000211706.2 TRBV6-1 chr7 142328297 142328786 + TR_V_gene KNOWN OTTHUMG00000158531.1 490 401 2 ENSG00000211707.3 TRBV7-1 chr7 142332182 142332701 + TR_V_gene KNOWN OTTHUMG00000158529.1 520 380 2 ENSG00000211745.3 TRBV4-2 chr7 142345421 142345985 + TR_V_gene KNOWN OTTHUMG00000158525.1 565 455 2 ENSG00000243889.1 TRBV8-1 chr7 142358639 142358917 + TR_V_pseudogene KNOWN OTTHUMG00000158518.3 279 279 1 ENSG00000242771.1 TRBV5-2 chr7 142372640 142372912 + TR_V_pseudogene KNOWN OTTHUMG00000158537.3 273 273 1 ENSG00000211713.3 TRBV6-4 chr7 142380806 142381261 + TR_V_gene KNOWN OTTHUMG00000158533.2 456 365 2 ENSG00000228084.1 RP5-884G6.2 chr1 99968383 99969864 - antisense NOVEL OTTHUMG00000010804.1 1482 655 2 ENSG00000211714.3 TRBV7-3 chr7 142384329 142384841 + TR_V_gene KNOWN OTTHUMG00000158528.3 513 397 2 ENSG00000239944.1 TRBV8-2 chr7 142386378 142386647 + TR_V_pseudogene KNOWN OTTHUMG00000158530.2 270 270 1 ENSG00000211715.1 TRBV5-3 chr7 142389202 142389668 + TR_V_gene KNOWN OTTHUMG00000158510.2 467 343 2 ENSG00000211716.2 TRBV9 chr7 142391891 142392412 + TR_V_gene KNOWN OTTHUMG00000158527.2 522 390 2 ENSG00000211717.3 TRBV10-1 chr7 142399860 142400377 + TR_V_gene KNOWN OTTHUMG00000158514.2 518 412 2 ENSG00000211720.3 TRBV11-1 chr7 142407672 142408136 + TR_V_gene KNOWN OTTHUMG00000158505.1 465 364 2 ENSG00000244661.1 TRBV12-1 chr7 142415224 142415666 + TR_V_pseudogene KNOWN OTTHUMG00000158507.1 443 344 2 ENSG00000229769.2 TRBV10-2 chr7 142424965 142425465 + TR_V_gene KNOWN OTTHUMG00000158535.2 501 395 2 ENSG00000241657.1 TRBV11-2 chr7 142433895 142434394 + lincRNA KNOWN OTTHUMG00000158536.3 500 408 2 ENSG00000211739.4 TRBV12-2 chr7 142440883 142441325 + TR_V_pseudogene KNOWN OTTHUMG00000158523.3 443 344 2 ENSG00000117620.11 SLC35A3 chr1 99969789 100026979 + protein_coding KNOWN OTTHUMG00000010805.3 57191 6241 57 ENSG00000211721.2 TRBV6-5 chr7 142450947 142451448 + TR_V_gene KNOWN OTTHUMG00000158519.1 502 410 2 ENSG00000253409.1 TRBV7-4 chr7 142455174 142455635 + TR_V_gene KNOWN OTTHUMG00000158508.3 462 347 2 ENSG00000230099.2 TRBV5-4 chr7 142462916 142463581 + TR_V_gene KNOWN OTTHUMG00000158524.3 666 544 2 ENSG00000211724.3 TRBV6-6 chr7 142469537 142470013 + TR_V_gene KNOWN OTTHUMG00000158509.3 477 388 2 ENSG00000227550.2 TRBV7-5 chr7 142474096 142474567 + TR_V_pseudogene KNOWN OTTHUMG00000158506.2 472 345 2 ENSG00000211725.3 TRBV5-5 chr7 142482548 142483019 + TR_V_gene KNOWN OTTHUMG00000158512.3 472 350 2 ENSG00000253188.1 TRBV6-7 chr7 142487863 142488295 + TR_V_gene KNOWN OTTHUMG00000158511.3 433 344 2 ENSG00000211727.3 TRBV7-6 chr7 142492132 142492673 + TR_V_gene KNOWN OTTHUMG00000158882.3 542 392 2 ENSG00000211728.2 TRBV5-6 chr7 142500028 142500534 + TR_V_gene KNOWN OTTHUMG00000158873.1 507 384 2 ENSG00000253534.1 TRBV6-8 chr7 142507382 142507810 + TR_V_gene KNOWN OTTHUMG00000158916.3 429 341 2 ENSG00000212248.1 RNU6-750P chr1 99978939 99979045 + snRNA KNOWN NA 107 107 1 ENSG00000253291.1 TRBV7-7 chr7 142511626 142512127 + TR_V_gene KNOWN OTTHUMG00000158872.1 502 347 2 ENSG00000211731.1 TRBV5-7 chr7 142520090 142520556 + TR_V_gene KNOWN OTTHUMG00000158897.1 467 343 2 ENSG00000278030.1 TRBV7-9 chr7 142529290 142529762 + TR_V_gene KNOWN OTTHUMG00000188552.1 473 347 2 ENSG00000276405.1 TRBV13 chr7 142535809 142536292 + TR_V_gene KNOWN OTTHUMG00000188553.1 484 374 2 ENSG00000275791.1 TRBV10-3 chr7 142544212 142544685 + TR_V_gene KNOWN OTTHUMG00000188554.1 474 368 2 ENSG00000276597.1 TRBV11-3 chr7 142554836 142555318 + TR_V_gene KNOWN OTTHUMG00000188555.1 483 392 2 ENSG00000274752.1 TRBV12-3 chr7 142560423 142560931 + TR_V_gene KNOWN OTTHUMG00000188556.1 509 409 2 ENSG00000276953.1 TRBV12-4 chr7 142563740 142564245 + TR_V_gene KNOWN OTTHUMG00000188557.1 506 406 2 ENSG00000275158.1 TRBV12-5 chr7 142580917 142581427 + TR_V_gene KNOWN OTTHUMG00000188558.1 511 411 2 ENSG00000275743.1 TRBV14 chr7 142587868 142588359 + TR_V_gene KNOWN OTTHUMG00000188559.1 492 406 2 ENSG00000202259.1 RNU6-1318P chr1 100000637 100000739 - snRNA KNOWN NA 103 103 1 ENSG00000276819.1 TRBV15 chr7 142592928 142593473 + TR_V_gene KNOWN OTTHUMG00000188560.1 546 421 2 ENSG00000275243.1 TRBV16 chr7 142598016 142598469 + TR_V_gene KNOWN OTTHUMG00000188561.1 454 347 2 ENSG00000277880.1 TRBV17 chr7 142601628 142602360 + TR_V_gene KNOWN OTTHUMG00000188562.1 733 344 2 ENSG00000276557.1 TRBV18 chr7 142615716 142616415 + TR_V_gene KNOWN OTTHUMG00000188563.1 700 428 2 ENSG00000211746.3 TRBV19 chr7 142618849 142619532 + TR_V_gene KNOWN OTTHUMG00000158877.3 684 552 2 ENSG00000211747.3 TRBV20-1 chr7 142626649 142627399 + TR_V_gene KNOWN OTTHUMG00000158899.2 751 413 2 ENSG00000251578.1 TRBV21-1 chr7 142636924 142637384 + TR_V_pseudogene KNOWN OTTHUMG00000158880.3 461 348 2 ENSG00000240578.1 TRBV22-1 chr7 142641746 142642196 + TR_V_pseudogene KNOWN OTTHUMG00000158895.1 451 337 2 ENSG00000211749.1 TRBV23-1 chr7 142645961 142646467 + TR_V_gene KNOWN OTTHUMG00000158920.1 507 347 2 ENSG00000211750.2 TRBV24-1 chr7 142656701 142657213 + TR_V_gene KNOWN OTTHUMG00000158889.2 513 381 2 ENSG00000261254.2 RP4-714D9.5 chr1 100030566 100035637 + sense_overlapping NOVEL OTTHUMG00000175888.2 5072 5072 1 ENSG00000270672.1 MTRNR2L6 chr7 142666272 142667718 + protein_coding KNOWN OTTHUMG00000184977.2 1447 1447 1 ENSG00000211751.6 TRBV25-1 chr7 142670740 142793141 + TR_V_gene KNOWN OTTHUMG00000158868.3 122402 1231 21 ENSG00000211772.7 TRBC2 chr7 142670777 142802748 + TR_C_gene KNOWN OTTHUMG00000158912.3 131972 1658 35 ENSG00000239992.1 TRBVA chr7 142681415 142681869 + TR_V_pseudogene KNOWN OTTHUMG00000158911.2 455 316 2 ENSG00000249912.1 TRBV26 chr7 142695699 142696183 + TR_V_pseudogene KNOWN OTTHUMG00000158928.3 485 344 2 ENSG00000241911.1 TRBVB chr7 142711384 142711924 + TR_V_pseudogene KNOWN OTTHUMG00000158869.3 541 408 2 ENSG00000211752.3 TRBV27 chr7 142715346 142715861 + TR_V_gene NOVEL OTTHUMG00000158924.3 516 387 2 ENSG00000211753.3 TRBV28 chr7 142720660 142793255 + TR_V_gene KNOWN OTTHUMG00000158900.1 72596 1064 9 ENSG00000244273.1 PGBD4P1 chr7 142722358 142722764 + processed_pseudogene KNOWN OTTHUMG00000158890.3 407 407 1 ENSG00000232869.2 TRBV29-1 chr7 142740206 142740894 + TR_V_gene KNOWN OTTHUMG00000158898.1 689 402 2 ENSG00000156875.12 HIAT1 chr1 100038097 100083377 + protein_coding KNOWN OTTHUMG00000010755.1 45281 2943 15 ENSG00000204983.11 PRSS1 chr7 142749468 142763997 + protein_coding KNOWN OTTHUMG00000158923.3 14530 2081 33 ENSG00000250591.3 PRSS3P1 chr7 142760415 142763943 + unprocessed_pseudogene KNOWN OTTHUMG00000158914.3 3529 742 5 ENSG00000275896.3 PRSS3P2 chr7 142770970 142774557 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000158904.7 3588 1150 11 ENSG00000243661.1 WBP1LP1 chr7 142778642 142779537 - processed_pseudogene KNOWN OTTHUMG00000158902.2 896 896 1 ENSG00000211764.1 TRBJ2-1 chr7 142796365 142796414 + TR_J_gene KNOWN OTTHUMG00000158918.1 50 50 1 ENSG00000211765.1 TRBJ2-2 chr7 142796560 142796610 + TR_J_gene KNOWN OTTHUMG00000158870.1 51 51 1 ENSG00000211766.1 TRBJ2-2P chr7 142796697 142796742 + TR_J_gene KNOWN OTTHUMG00000158876.1 46 46 1 ENSG00000211767.1 TRBJ2-3 chr7 142796847 142796895 + TR_J_gene KNOWN OTTHUMG00000158896.1 49 49 1 ENSG00000211768.1 TRBJ2-4 chr7 142796998 142797047 + TR_J_gene KNOWN OTTHUMG00000158888.1 50 50 1 ENSG00000211769.1 TRBJ2-5 chr7 142797119 142797166 + TR_J_gene KNOWN OTTHUMG00000158874.1 48 48 1 ENSG00000241073.1 RP4-714D9.2 chr1 100057990 100084471 - antisense NOVEL OTTHUMG00000010753.1 26482 384 2 ENSG00000211770.1 TRBJ2-6 chr7 142797239 142797291 + TR_J_gene KNOWN OTTHUMG00000158913.1 53 53 1 ENSG00000211771.1 TRBJ2-7 chr7 142797456 142797502 + TR_J_gene KNOWN OTTHUMG00000158906.1 47 47 1 ENSG00000237254.2 TRBV30 chr7 142812586 142813399 - TR_V_gene KNOWN OTTHUMG00000158907.1 814 447 2 ENSG00000106123.10 EPHB6 chr7 142855061 142871094 + protein_coding KNOWN OTTHUMG00000155707.4 16034 5325 130 ENSG00000165125.16 TRPV6 chr7 142871203 142885762 - protein_coding KNOWN OTTHUMG00000157158.5 14560 11925 68 ENSG00000224970.2 RP11-114L10.2 chr7 142875836 142892743 + antisense NOVEL OTTHUMG00000157156.2 16908 263 2 ENSG00000127412.5 TRPV5 chr7 142908101 142933808 - protein_coding KNOWN OTTHUMG00000157157.3 25708 3686 37 ENSG00000165131.6 C7orf34 chr7 142939343 142940868 + protein_coding KNOWN OTTHUMG00000152664.1 1526 923 5 ENSG00000197993.6 KEL chr7 142941114 142962681 - protein_coding KNOWN OTTHUMG00000157159.9 21568 3923 61 ENSG00000179468.5 OR9A2 chr7 143026158 143027195 - protein_coding KNOWN OTTHUMG00000158386.1 1038 1038 1 ENSG00000156876.9 SASS6 chr1 100083563 100132955 - protein_coding KNOWN OTTHUMG00000010754.3 49393 3972 33 ENSG00000239293.1 OR9P1P chr7 143047213 143047580 - unprocessed_pseudogene KNOWN OTTHUMG00000154319.2 368 281 2 ENSG00000225781.1 OR6V1 chr7 143052320 143053347 + protein_coding KNOWN OTTHUMG00000158385.1 1028 1028 1 ENSG00000179420.11 OR6W1P chr7 143062330 143063585 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000158389.2 1256 1141 3 ENSG00000159763.3 PIP chr7 143132077 143139746 + protein_coding KNOWN OTTHUMG00000152635.1 7670 585 4 ENSG00000236398.2 TAS2R39 chr7 143183419 143184435 + protein_coding KNOWN OTTHUMG00000152636.2 1017 1017 1 ENSG00000268170.2 RP11-556I13.2 chr7 143220468 143222267 - antisense NOVEL OTTHUMG00000187176.1 1800 1800 1 ENSG00000221937.4 TAS2R40 chr7 143222037 143223079 + protein_coding KNOWN OTTHUMG00000152638.1 1043 1043 1 ENSG00000279223.1 RP11-556I13.1 chr7 143224042 143224234 - TEC KNOWN OTTHUMG00000173153.1 193 193 1 ENSG00000197448.12 GSTK1 chr7 143244093 143270854 + protein_coding KNOWN OTTHUMG00000152637.6 26762 4228 54 ENSG00000231840.1 AC073342.12 chr7 143255264 143287380 - antisense NOVEL OTTHUMG00000152673.1 32117 930 6 ENSG00000241670.3 AP006222.1 chr1 258568 259024 - processed_pseudogene KNOWN OTTHUMG00000002552.1 457 457 1 ENSG00000069812.10 HES2 chr1 6412418 6424670 - protein_coding KNOWN OTTHUMG00000000752.2 12253 5407 19 ENSG00000226952.1 RP4-714D9.4 chr1 100099239 100099490 + processed_pseudogene KNOWN OTTHUMG00000010840.1 252 252 1 ENSG00000178826.9 TMEM139 chr7 143279957 143288048 + protein_coding KNOWN OTTHUMG00000152652.2 8092 2564 27 ENSG00000106144.18 CASP2 chr7 143288215 143307696 + protein_coding KNOWN OTTHUMG00000023641.4 19482 8020 57 ENSG00000239419.3 RN7SL535P chr7 143290615 143290910 + misc_RNA KNOWN NA 296 296 1 ENSG00000240322.3 RN7SL481P chr7 143298516 143298814 + misc_RNA KNOWN NA 299 299 1 ENSG00000231531.5 HINT1P1 chr7 143312684 143313061 - processed_pseudogene KNOWN OTTHUMG00000152696.1 378 378 1 ENSG00000188037.9 CLCN1 chr7 143316126 143352083 + protein_coding KNOWN OTTHUMG00000152695.1 35958 3306 39 ENSG00000159784.16 FAM131B chr7 143353400 143362770 - protein_coding KNOWN OTTHUMG00000152697.3 9371 6430 55 ENSG00000272619.1 RP11-563K23.1 chr7 143363899 143364229 + lincRNA NOVEL OTTHUMG00000186356.1 331 331 1 ENSG00000232533.1 AC093673.5 chr7 143379692 143380495 - antisense NOVEL OTTHUMG00000152694.1 804 648 2 ENSG00000159840.14 ZYX chr7 143381080 143391111 + protein_coding KNOWN OTTHUMG00000023822.9 10032 3482 52 ENSG00000122435.8 TRMT13 chr1 100133150 100150497 + protein_coding KNOWN OTTHUMG00000010841.4 17348 4133 32 ENSG00000278449.1 MIR6892 chr7 143382686 143382800 + miRNA KNOWN NA 115 115 1 ENSG00000146904.7 EPHA1 chr7 143390289 143408892 - protein_coding KNOWN OTTHUMG00000155894.2 18604 4733 50 ENSG00000229153.4 EPHA1-AS1 chr7 143407813 143523449 + antisense NOVEL OTTHUMG00000155893.1 115637 5316 8 ENSG00000234066.1 TAS2R62P chr7 143437034 143437973 + unitary_pseudogene KNOWN OTTHUMG00000154892.1 940 940 1 ENSG00000185899.1 TAS2R60 chr7 143443453 143444409 + protein_coding KNOWN OTTHUMG00000154891.1 957 957 1 ENSG00000221855.1 TAS2R41 chr7 143477873 143478796 + protein_coding KNOWN OTTHUMG00000155892.1 924 924 1 ENSG00000236853.1 OR2R1P chr7 143488489 143489402 - unitary_pseudogene KNOWN OTTHUMG00000154318.1 914 914 1 ENSG00000176510.4 OR10AC1 chr7 143510933 143511911 - polymorphic_pseudogene KNOWN OTTHUMG00000155896.2 979 979 1 ENSG00000229977.2 AC073264.10 chr7 143532749 143533164 - processed_pseudogene KNOWN OTTHUMG00000155891.1 416 416 1 ENSG00000229877.1 PAICSP5 chr7 143545186 143546735 - processed_pseudogene KNOWN OTTHUMG00000155897.2 1550 1217 2 ENSG00000122477.11 LRRC39 chr1 100148449 100178273 - protein_coding KNOWN OTTHUMG00000010839.2 29825 1991 40 ENSG00000271079.1 CTAGE15 chr7 143571801 143574387 + protein_coding KNOWN OTTHUMG00000153233.2 2587 2587 1 ENSG00000252037.1 RNU6-162P chr7 143574746 143574848 + snRNA KNOWN NA 103 103 1 ENSG00000230556.1 AC073264.6 chr7 143578907 143579072 + processed_pseudogene KNOWN OTTHUMG00000153234.1 166 166 1 ENSG00000223459.5 TCAF1P1 chr7 143598040 143604839 + unprocessed_pseudogene KNOWN OTTHUMG00000022870.3 6800 2232 7 ENSG00000170379.18 TCAF2 chr7 143620950 143730409 + protein_coding KNOWN OTTHUMG00000153232.5 109460 6466 45 ENSG00000252523.1 RNU6-267P chr7 143754628 143754730 - snRNA KNOWN NA 103 103 1 ENSG00000271321.1 CTAGE6 chr7 143755089 143757696 - protein_coding KNOWN OTTHUMG00000157770.2 2608 2608 1 ENSG00000253882.5 RP11-61L23.2 chr7 143761790 143836933 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000157769.1 75144 3625 28 ENSG00000241136.1 PAICSP6 chr7 143782667 143784284 + processed_pseudogene KNOWN OTTHUMG00000157767.1 1618 1280 2 ENSG00000232145.1 RP11-307I2.1 chr7 143796295 143796720 + processed_pseudogene KNOWN OTTHUMG00000157244.1 426 426 1 ENSG00000137992.13 DBT chr1 100186919 100249834 - protein_coding KNOWN OTTHUMG00000010921.2 62916 11303 19 ENSG00000159860.6 TCAF2P1 chr7 143800732 143817973 + unprocessed_pseudogene KNOWN OTTHUMG00000153235.2 17242 2421 8 ENSG00000198420.8 TCAF1 chr7 143851375 143902198 - protein_coding KNOWN OTTHUMG00000157773.1 50824 6310 36 ENSG00000221910.2 OR2F2 chr7 143935166 143936279 + protein_coding KNOWN OTTHUMG00000157768.1 1114 1114 1 ENSG00000243583.1 RP4-669B10.3 chr7 143954844 143997312 + lincRNA NOVEL OTTHUMG00000157766.1 42469 676 5 ENSG00000213215.3 OR2F1 chr7 143959927 143961015 + polymorphic_pseudogene KNOWN OTTHUMG00000157771.1 1089 1089 2 ENSG00000279723.1 OR2F1 chr7 143959971 143960924 + protein_coding KNOWN NA 954 954 1 ENSG00000270729.1 RP4-669B10.6 chr7 143979121 143980225 - processed_pseudogene KNOWN OTTHUMG00000184500.1 1105 698 2 ENSG00000273377.1 OR2Q1P chr7 143980905 143981820 + unprocessed_pseudogene KNOWN OTTHUMG00000059327.2 916 916 1 ENSG00000242280.1 SLC16A1P1 chr7 143985142 143986651 + processed_pseudogene KNOWN OTTHUMG00000157772.1 1510 1510 1 ENSG00000221813.3 OR6B1 chr7 144003929 144004983 + protein_coding KNOWN OTTHUMG00000157765.1 1055 1055 1 ENSG00000271415.1 RP11-305E17.7 chr1 100196816 100197051 + processed_pseudogene KNOWN OTTHUMG00000184296.1 236 236 1 ENSG00000221836.2 OR2A5 chr7 144050368 144051380 + protein_coding KNOWN OTTHUMG00000158006.1 1013 1013 1 ENSG00000221933.2 OR2A25 chr7 144074182 144075195 + protein_coding KNOWN OTTHUMG00000158013.1 1014 1014 1 ENSG00000239967.1 OR2A41P chr7 144077721 144077825 + unprocessed_pseudogene KNOWN OTTHUMG00000158014.1 105 105 1 ENSG00000221858.2 OR2A12 chr7 144095048 144096093 + protein_coding KNOWN OTTHUMG00000157996.1 1046 1046 1 ENSG00000221989.2 OR2A2 chr7 144109514 144110564 + protein_coding KNOWN OTTHUMG00000158001.1 1051 1051 1 ENSG00000221938.3 OR2A14 chr7 144109583 144130069 + protein_coding KNOWN OTTHUMG00000158003.1 20487 1422 3 ENSG00000239981.1 OR2A15P chr7 144118461 144119360 - unprocessed_pseudogene KNOWN OTTHUMG00000157999.1 900 900 1 ENSG00000273234.1 OR2A13P chr7 144142009 144142938 + unprocessed_pseudogene KNOWN OTTHUMG00000154312.1 930 930 1 ENSG00000183122.4 OR2A3P chr7 144157226 144158178 + unprocessed_pseudogene KNOWN OTTHUMG00000158011.1 953 953 1 ENSG00000240621.1 OR2AO1P chr7 144176740 144177142 + unprocessed_pseudogene KNOWN OTTHUMG00000158012.1 403 403 1 ENSG00000225169.1 BRI3P1 chr1 100213293 100213670 + processed_pseudogene KNOWN OTTHUMG00000010919.1 378 378 1 ENSG00000225932.3 CTAGE4 chr7 144183466 144186053 + protein_coding KNOWN OTTHUMG00000157997.1 2588 2588 1 ENSG00000213214.4 ARHGEF35 chr7 144186083 144195655 - protein_coding KNOWN OTTHUMG00000158010.1 9573 2431 2 ENSG00000244198.4 RP4-545C24.1 chr7 144194858 144280547 + antisense NOVEL OTTHUMG00000158007.1 85690 2249 33 ENSG00000212807.1 OR2A42 chr7 144231911 144232843 - protein_coding KNOWN OTTHUMG00000157995.1 933 933 1 ENSG00000170356.8 OR2A20P chr7 144250045 144252957 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000158000.1 2913 2913 2 ENSG00000244479.5 OR2A1-AS1 chr7 144251264 144356181 - antisense NOVEL OTTHUMG00000158050.1 104918 4659 63 ENSG00000243896.3 OR2A7 chr7 144258607 144259722 - protein_coding KNOWN OTTHUMG00000158002.1 1116 1116 1 ENSG00000244693.1 CTAGE8 chr7 144266701 144269288 - protein_coding KNOWN OTTHUMG00000158009.1 2588 2588 1 ENSG00000204959.4 ARHGEF34P chr7 144272445 144286966 - unprocessed_pseudogene KNOWN OTTHUMG00000158008.1 14522 4532 12 ENSG00000228960.5 OR2A9P chr7 144294480 144300934 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000157998.1 6455 3337 5 ENSG00000230287.3 RP11-305E17.4 chr1 100249090 100249311 + processed_pseudogene KNOWN OTTHUMG00000010918.1 222 222 1 ENSG00000221970.1 OR2A1 chr7 144318125 144319057 + protein_coding KNOWN OTTHUMG00000158005.1 933 933 1 ENSG00000050327.13 ARHGEF5 chr7 144355288 144380632 + protein_coding KNOWN OTTHUMG00000158004.2 25345 5818 46 ENSG00000106410.13 NOBOX chr7 144397240 144410227 - protein_coding KNOWN OTTHUMG00000158051.2 12988 2076 20 ENSG00000242978.1 RP4-545C24.5 chr7 144434826 144435314 - processed_pseudogene KNOWN OTTHUMG00000158052.1 489 489 1 ENSG00000221507.1 RNU6ATAC40P chr7 144451681 144451817 + snRNA KNOWN NA 137 137 1 ENSG00000196511.12 TPK1 chr7 144451941 144836395 - protein_coding KNOWN OTTHUMG00000152774.10 384455 8438 85 ENSG00000243746.1 EEF1A1P10 chr7 144647186 144648575 - processed_pseudogene KNOWN OTTHUMG00000158061.1 1390 1390 1 ENSG00000200673.1 RN7SKP174 chr7 144849755 144850084 - misc_RNA KNOWN NA 330 330 1 ENSG00000236343.1 EI24P4 chr7 145005058 145006135 + processed_pseudogene KNOWN OTTHUMG00000152717.1 1078 1078 1 ENSG00000214035.3 AC073310.4 chr7 145009961 145010993 + processed_pseudogene KNOWN OTTHUMG00000152722.1 1033 1033 1 ENSG00000224616.1 RTCA-AS1 chr1 100264009 100266120 - antisense NOVEL OTTHUMG00000040490.1 2112 423 4 ENSG00000225918.1 RPL7P59 chr7 145039999 145040941 - processed_pseudogene KNOWN OTTHUMG00000152721.1 943 943 1 ENSG00000226592.1 AC004911.2 chr7 145269514 145270384 + processed_pseudogene KNOWN OTTHUMG00000152718.1 871 871 1 ENSG00000231839.1 AC073055.2 chr7 145583197 145584817 + processed_pseudogene KNOWN OTTHUMG00000152720.1 1621 1621 1 ENSG00000230746.1 AC006007.1 chr7 145675882 145681369 - lincRNA NOVEL OTTHUMG00000152719.1 5488 672 2 ENSG00000280144.1 RP11-13M3.1 chr7 146050062 146050366 + TEC KNOWN OTTHUMG00000173150.1 305 305 1 ENSG00000174469.16 CNTNAP2 chr7 146116002 148420998 + protein_coding KNOWN OTTHUMG00000152743.3 2304997 10864 63 ENSG00000274127.1 uc_338 chr7 146208665 146208819 - misc_RNA NOVEL NA 155 155 1 ENSG00000274118.1 Y_RNA chr7 146311720 146311822 + misc_RNA NOVEL NA 103 103 1 ENSG00000221766.1 AC084872.1 chr7 146896597 146896693 - miRNA NOVEL NA 97 97 1 ENSG00000236795.1 AC006004.1 chr7 147080934 147097609 - antisense NOVEL OTTHUMG00000152744.1 16676 2145 4 ENSG00000137996.11 RTCA chr1 100266207 100292769 + protein_coding KNOWN OTTHUMG00000010920.2 26563 3037 37 ENSG00000226857.1 DUTP3 chr7 147146342 147146756 + processed_pseudogene KNOWN OTTHUMG00000152746.1 415 415 1 ENSG00000232391.1 RANP2 chr7 147167344 147167572 + processed_pseudogene KNOWN OTTHUMG00000152745.1 229 229 1 ENSG00000221442.1 MIR548F4 chr7 147378017 147378121 - miRNA KNOWN NA 105 105 1 ENSG00000230190.1 AC005518.2 chr7 147671711 147673143 + sense_intronic NOVEL OTTHUMG00000152747.1 1433 1116 2 ENSG00000270634.1 RP4-777G9.1 chr7 147704294 147704575 - processed_pseudogene KNOWN OTTHUMG00000184499.1 282 282 1 ENSG00000207318.1 RNU6-1184P chr7 147831770 147831877 + snRNA KNOWN NA 108 108 1 ENSG00000251936.1 RNA5SP249 chr7 147849884 147849982 + rRNA KNOWN NA 99 99 1 ENSG00000242266.3 RN7SL456P chr7 147940007 147940301 + misc_RNA KNOWN NA 295 295 1 ENSG00000199370.2 U3 chr7 148389645 148389859 + snoRNA NOVEL NA 215 215 1 ENSG00000243374.3 RN7SL72P chr7 148438309 148438577 + misc_RNA KNOWN NA 269 269 1 ENSG00000207750.1 MIR553 chr1 100281241 100281308 + miRNA KNOWN NA 68 68 1 ENSG00000274133.1 RP11-163I18.2 chr7 148445786 148446299 + processed_pseudogene KNOWN OTTHUMG00000187706.1 514 514 1 ENSG00000213210.4 AC005229.5 chr7 148580401 148580799 + processed_pseudogene KNOWN OTTHUMG00000152755.1 399 399 1 ENSG00000170279.2 C7orf33 chr7 148590565 148615860 + protein_coding KNOWN OTTHUMG00000152756.1 25296 1354 3 ENSG00000213209.2 AC005229.7 chr7 148637179 148637587 + processed_pseudogene KNOWN OTTHUMG00000152775.1 409 409 1 ENSG00000270200.1 RP5-1136G13.1 chr7 148649547 148650240 + processed_pseudogene KNOWN OTTHUMG00000184415.1 694 323 2 ENSG00000273314.1 RP5-1136G13.2 chr7 148696467 148698664 - antisense NOVEL OTTHUMG00000186357.1 2198 2198 1 ENSG00000055130.14 CUL1 chr7 148697914 148801036 + protein_coding KNOWN OTTHUMG00000152776.2 103123 3548 88 ENSG00000264918.1 AC005229.1 chr7 148730829 148730928 - miRNA NOVEL NA 100 100 1 ENSG00000106462.9 EZH2 chr7 148807383 148884321 - protein_coding KNOWN OTTHUMG00000158973.2 76939 4522 161 ENSG00000275586.1 Metazoa_SRP chr7 148876018 148876286 + misc_RNA NOVEL NA 269 269 1 ENSG00000187017.13 ESPN chr1 6424788 6461370 + protein_coding KNOWN OTTHUMG00000000753.5 36583 4121 59 ENSG00000215871.2 RP5-837M10.1 chr1 100331804 100332617 - processed_pseudogene KNOWN OTTHUMG00000010983.1 814 814 1 ENSG00000239468.3 RN7SL569P chr7 148890226 148890513 + misc_RNA KNOWN NA 288 288 1 ENSG00000252316.1 RNY4 chr7 148963315 148963410 + misc_RNA KNOWN NA 96 96 1 ENSG00000202354.1 RNY3 chr7 148983755 148983856 + misc_RNA KNOWN NA 102 102 1 ENSG00000201098.1 RNY1 chr7 148987136 148987248 - misc_RNA KNOWN NA 113 113 1 ENSG00000281189.1 GHET1 chr7 148987527 148989432 + lincRNA KNOWN OTTHUMG00000189524.1 1906 1906 1 ENSG00000155660.9 PDIA4 chr7 149003062 149028641 - protein_coding KNOWN OTTHUMG00000150248.1 25580 3277 17 ENSG00000202528.1 RNU6-650P chr7 149033057 149033167 + snRNA KNOWN NA 111 111 1 ENSG00000234565.1 COX6B1P1 chr7 149053961 149054173 + processed_pseudogene KNOWN OTTHUMG00000151504.1 213 213 1 ENSG00000197362.12 ZNF786 chr7 149069643 149090782 - protein_coding KNOWN OTTHUMG00000158975.1 21140 3271 11 ENSG00000204947.7 ZNF425 chr7 149102784 149126346 - protein_coding KNOWN OTTHUMG00000158971.1 23563 3687 12 ENSG00000223906.1 RP5-837M10.2 chr1 100344477 100345242 + lincRNA NOVEL OTTHUMG00000010984.1 766 467 2 ENSG00000240877.3 RN7SL521P chr7 149125690 149125986 - misc_RNA KNOWN NA 297 297 1 ENSG00000197024.7 ZNF398 chr7 149126416 149182802 + protein_coding KNOWN OTTHUMG00000158970.2 56387 6041 29 ENSG00000239719.1 RP4-800G7.1 chr7 149191043 149191223 - processed_pseudogene KNOWN OTTHUMG00000158966.1 181 181 1 ENSG00000170265.10 ZNF282 chr7 149195485 149226248 + protein_coding KNOWN OTTHUMG00000158974.3 30764 3832 22 ENSG00000170260.7 ZNF212 chr7 149239651 149255609 + protein_coding KNOWN OTTHUMG00000158968.1 15959 3182 19 ENSG00000204946.8 ZNF783 chr7 149262171 149297302 + protein_coding KNOWN OTTHUMG00000158969.2 35132 6726 47 ENSG00000271664.1 RP4-800G7.3 chr7 149275619 149277992 - unprocessed_pseudogene KNOWN OTTHUMG00000184497.1 2374 1095 4 ENSG00000244560.5 RP4-800G7.2 chr7 149285281 149297312 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155009.4 12032 4271 31 ENSG00000231397.1 AC004941.5 chr7 149321865 149322092 - processed_pseudogene KNOWN OTTHUMG00000151502.1 228 228 1 ENSG00000215311.3 NPM1P12 chr7 149334024 149334857 + processed_pseudogene KNOWN OTTHUMG00000151505.1 834 834 1 ENSG00000079335.16 CDC14A chr1 100351734 100520277 + protein_coding KNOWN OTTHUMG00000010987.1 168544 5420 54 ENSG00000228151.1 AC004941.3 chr7 149398204 149401456 + antisense NOVEL OTTHUMG00000151503.1 3253 3120 2 ENSG00000261842.1 RP11-143I21.1 chr7 149422675 149424890 + lincRNA NOVEL OTTHUMG00000173255.1 2216 2216 1 ENSG00000196453.7 ZNF777 chr7 149431363 149461123 - protein_coding KNOWN OTTHUMG00000158967.1 29761 3233 6 ENSG00000181220.14 ZNF746 chr7 149472794 149497817 - protein_coding KNOWN OTTHUMG00000158972.2 25024 8260 22 ENSG00000280992.1 AC004932.1 chr7 149541747 149541846 - miRNA NOVEL NA 100 100 1 ENSG00000133624.12 ZNF767P chr7 149547154 149624752 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000158976.2 77599 4012 37 ENSG00000133619.16 KRBA1 chr7 149714781 149734575 + protein_coding KNOWN OTTHUMG00000157886.7 19795 5337 77 ENSG00000181444.11 ZNF467 chr7 149764182 149773479 - protein_coding KNOWN OTTHUMG00000157883.1 9298 2734 10 ENSG00000197558.10 SSPO chr7 149776042 149833979 + protein_coding KNOWN OTTHUMG00000157884.6 57938 21144 283 ENSG00000106479.9 ZNF862 chr7 149838367 149867479 + protein_coding KNOWN OTTHUMG00000158093.1 29113 8430 21 ENSG00000216067.1 AC104457.1 chr1 100378682 100378775 - miRNA NOVEL NA 94 94 1 ENSG00000280149.1 RP4-751H13.5 chr7 149851572 149852170 + TEC KNOWN OTTHUMG00000158096.1 599 599 1 ENSG00000273419.1 RP4-751H13.7 chr7 149858400 149862492 - antisense NOVEL OTTHUMG00000186358.1 4093 4093 1 ENSG00000204934.9 ATP6V0E2-AS1 chr7 149867697 149880610 - antisense NOVEL OTTHUMG00000158095.2 12914 3291 10 ENSG00000171130.16 ATP6V0E2 chr7 149872968 149880698 + protein_coding KNOWN OTTHUMG00000158094.3 7731 3335 50 ENSG00000273293.1 RP11-445N20.3 chr7 149881359 149881580 - lincRNA NOVEL OTTHUMG00000186371.1 222 222 1 ENSG00000279536.1 RP11-445N20.2 chr7 149881477 149882105 + TEC KNOWN OTTHUMG00000173263.1 629 629 1 ENSG00000273011.1 RP11-728K20.3 chr7 149890739 149891416 + lincRNA NOVEL OTTHUMG00000186372.1 678 678 1 ENSG00000224016.2 RP11-728K20.1 chr7 149891191 149909704 - unprocessed_pseudogene KNOWN OTTHUMG00000158112.2 18514 291 3 ENSG00000260555.1 RP11-728K20.2 chr7 150000752 150005124 + lincRNA NOVEL OTTHUMG00000173149.1 4373 3044 2 ENSG00000241449.4 RP11-545G3.1 chr7 150040521 150076655 + lincRNA NOVEL OTTHUMG00000158149.1 36135 1380 10 ENSG00000234332.1 BCAS2P2 chr1 100393033 100394026 - processed_pseudogene KNOWN OTTHUMG00000010985.1 994 674 2 ENSG00000276538.1 RP11-545G3.2 chr7 150047609 150047854 - unprocessed_pseudogene KNOWN OTTHUMG00000187707.1 246 246 1 ENSG00000280676.1 AC092666.1 chr7 150079905 150079993 - miRNA NOVEL NA 89 89 1 ENSG00000106526.9 ACTR3C chr7 150243916 150323725 - protein_coding KNOWN OTTHUMG00000158323.3 79810 6460 28 ENSG00000127399.13 LRRC61 chr7 150322639 150338150 + protein_coding KNOWN OTTHUMG00000158326.1 15512 2735 14 ENSG00000188707.5 ZBED6CL chr7 150329789 150332721 + protein_coding KNOWN OTTHUMG00000158328.1 2933 2933 1 ENSG00000106538.8 RARRES2 chr7 150338317 150341674 - protein_coding KNOWN OTTHUMG00000158325.2 3358 1921 25 ENSG00000261305.1 RP4-584D14.7 chr7 150341771 150342607 + sense_overlapping NOVEL OTTHUMG00000173217.1 837 837 1 ENSG00000240449.1 RP4-584D14.5 chr7 150363777 150372590 - antisense NOVEL OTTHUMG00000158322.1 8814 577 3 ENSG00000214022.10 REPIN1 chr7 150368189 150374044 + protein_coding KNOWN OTTHUMG00000158330.3 5856 4649 50 ENSG00000196456.7 ZNF775 chr7 150368790 150412470 + protein_coding KNOWN OTTHUMG00000158324.1 43681 6876 31 ENSG00000228086.1 RP5-837M10.4 chr1 100462399 100485997 - antisense NOVEL OTTHUMG00000010986.1 23599 592 2 ENSG00000239377.1 RP4-584D14.6 chr7 150379854 150383885 - antisense NOVEL OTTHUMG00000158329.1 4032 420 2 ENSG00000242258.1 LINC00996 chr7 150433654 150448140 + lincRNA NOVEL OTTHUMG00000158321.1 14487 2171 7 ENSG00000171115.3 GIMAP8 chr7 150450630 150479392 + protein_coding KNOWN OTTHUMG00000158327.1 28763 4184 5 ENSG00000271582.1 RP11-511P7.4 chr7 150484061 150485135 - processed_pseudogene KNOWN OTTHUMG00000184495.1 1075 1075 1 ENSG00000213205.3 STRADBP1 chr7 150512559 150513839 - processed_pseudogene KNOWN OTTHUMG00000157619.1 1281 1281 1 ENSG00000179144.4 GIMAP7 chr7 150514830 150521073 + protein_coding KNOWN OTTHUMG00000157626.1 6244 1256 2 ENSG00000243853.1 ALDH7A1P3 chr7 150541754 150542098 - processed_pseudogene KNOWN OTTHUMG00000157476.1 345 345 1 ENSG00000133574.8 GIMAP4 chr7 150567277 150573955 + protein_coding KNOWN OTTHUMG00000157475.3 6679 2193 14 ENSG00000271568.1 RP11-632K21.7 chr7 150603561 150604644 - processed_pseudogene KNOWN OTTHUMG00000184493.1 1084 1084 1 ENSG00000232361.3 RP11-632K21.3 chr7 150614061 150614764 - processed_pseudogene KNOWN OTTHUMG00000157474.1 704 704 1 ENSG00000181656.6 GPR88 chr1 100538137 100542018 + protein_coding KNOWN OTTHUMG00000010981.1 3882 3491 2 ENSG00000133561.14 GIMAP6 chr7 150625375 150632648 - protein_coding KNOWN OTTHUMG00000159137.3 7274 3913 9 ENSG00000270990.1 RP11-632K21.6 chr7 150676833 150677918 - processed_pseudogene KNOWN OTTHUMG00000184491.2 1086 435 4 ENSG00000106560.9 GIMAP2 chr7 150685697 150693641 + protein_coding KNOWN OTTHUMG00000157488.1 7945 2097 8 ENSG00000213203.2 GIMAP1 chr7 150716557 150724284 + protein_coding KNOWN OTTHUMG00000157489.2 7728 4846 5 ENSG00000281887.1 GIMAP1-GIMAP5 chr7 150716557 150743649 + protein_coding NOVEL OTTHUMG00000189885.1 27093 2262 12 ENSG00000196329.9 GIMAP5 chr7 150722253 150750033 + protein_coding KNOWN OTTHUMG00000157542.2 27781 6031 20 ENSG00000177590.7 GIMAP3P chr7 150746893 150747728 - processed_pseudogene KNOWN OTTHUMG00000158113.1 836 836 1 ENSG00000241134.3 BET1P1 chr7 150749736 150750094 + processed_pseudogene KNOWN OTTHUMG00000157576.1 359 359 1 ENSG00000106565.16 TMEM176B chr7 150791285 150801360 - protein_coding KNOWN OTTHUMG00000157577.2 10076 1979 41 ENSG00000002933.6 TMEM176A chr7 150800403 150805120 + protein_coding KNOWN OTTHUMG00000158114.2 4718 3479 49 ENSG00000213421.4 RP11-84O12.2 chr1 100586649 100587431 - processed_pseudogene KNOWN OTTHUMG00000010988.2 783 783 1 ENSG00000002726.18 AOC1 chr7 150824627 150861504 + protein_coding KNOWN OTTHUMG00000158306.1 36878 3824 52 ENSG00000055118.13 KCNH2 chr7 150944961 150978315 - protein_coding KNOWN OTTHUMG00000158341.4 33355 5877 54 ENSG00000164867.9 NOS3 chr7 150990995 151014588 + protein_coding KNOWN OTTHUMG00000158343.4 23594 5953 103 ENSG00000181652.17 ATG9B chr7 151012209 151024499 - protein_coding KNOWN OTTHUMG00000158634.9 12291 6391 82 ENSG00000197150.11 ABCB8 chr7 151028422 151047782 + protein_coding KNOWN OTTHUMG00000158686.3 19361 9336 170 ENSG00000243433.1 RP11-148K1.10 chr7 151028781 151029754 - antisense NOVEL OTTHUMG00000158684.1 974 511 2 ENSG00000213199.6 ASIC3 chr7 151048292 151052756 + protein_coding KNOWN OTTHUMG00000158685.2 4465 2748 70 ENSG00000164885.11 CDK5 chr7 151053812 151058530 - protein_coding KNOWN OTTHUMG00000158414.3 4719 2938 36 ENSG00000164889.11 SLC4A2 chr7 151057210 151076527 + protein_coding KNOWN OTTHUMG00000158443.3 19318 7590 156 ENSG00000244151.1 RP11-148K1.12 chr7 151074742 151076530 - antisense NOVEL OTTHUMG00000158693.1 1789 1230 2 ENSG00000230402.2 LINC01349 chr1 100627049 100640613 - lincRNA NOVEL OTTHUMG00000040491.2 13565 497 3 ENSG00000164896.18 FASTK chr7 151076593 151080866 - protein_coding KNOWN OTTHUMG00000158694.3 4274 3805 100 ENSG00000164897.11 TMUB1 chr7 151081080 151083546 - protein_coding KNOWN OTTHUMG00000158621.1 2467 2005 20 ENSG00000133612.17 AGAP3 chr7 151085831 151144436 + protein_coding KNOWN OTTHUMG00000158724.6 58606 11032 160 ENSG00000164900.4 GBX1 chr7 151148589 151174745 - protein_coding KNOWN OTTHUMG00000158751.3 26157 1467 5 ENSG00000146926.9 ASB10 chr7 151175698 151187832 - protein_coding KNOWN OTTHUMG00000157013.3 12135 2375 20 ENSG00000278685.3 RP11-148K1.1 chr7 151190873 151205496 - protein_coding NOVEL OTTHUMG00000156140.5 14624 2826 32 ENSG00000033050.6 ABCF2 chr7 151207837 151227230 - protein_coding KNOWN OTTHUMG00000154570.2 19394 4448 50 ENSG00000033100.13 CHPF2 chr7 151232489 151238827 + protein_coding KNOWN OTTHUMG00000157380.5 6339 4205 15 ENSG00000211517.1 MIR671 chr7 151238421 151238538 + miRNA KNOWN NA 118 118 1 ENSG00000082014.15 SMARCD3 chr7 151238764 151277896 - protein_coding KNOWN OTTHUMG00000157431.7 39133 5198 108 ENSG00000224685.1 RP11-84O12.3 chr1 100651947 100652267 + processed_pseudogene KNOWN OTTHUMG00000010989.1 321 321 1 ENSG00000272661.1 RP4-548D19.3 chr7 151240399 151240972 + antisense NOVEL OTTHUMG00000186373.1 574 574 1 ENSG00000243018.1 RP5-1070G24.2 chr7 151249325 151254390 + antisense NOVEL OTTHUMG00000157379.1 5066 216 2 ENSG00000013374.14 NUB1 chr7 151341699 151378449 + protein_coding KNOWN OTTHUMG00000157365.3 36751 5411 89 ENSG00000187260.14 WDR86 chr7 151375909 151410727 - protein_coding KNOWN OTTHUMG00000150764.5 34819 4044 35 ENSG00000243836.4 WDR86-AS1 chr7 151409161 151413354 + processed_transcript NOVEL OTTHUMG00000157360.1 4194 1354 15 ENSG00000241456.1 RP4-555L14.4 chr7 151427683 151439124 + antisense NOVEL OTTHUMG00000157352.1 11442 564 2 ENSG00000127377.7 CRYGN chr7 151428835 151440813 - protein_coding KNOWN OTTHUMG00000157353.1 11979 2716 16 ENSG00000265810.1 MIR3907 chr7 151433489 151433639 - miRNA KNOWN NA 151 151 1 ENSG00000241959.3 RN7SL76P chr7 151464650 151464938 - misc_RNA KNOWN NA 289 289 1 ENSG00000106615.8 RHEB chr7 151466012 151520120 - protein_coding KNOWN OTTHUMG00000157330.2 54109 3535 43 ENSG00000265392.1 MIR4252 chr1 6429834 6429896 - miRNA KNOWN NA 63 63 1 ENSG00000162692.9 VCAM1 chr1 100719742 100739045 + protein_coding KNOWN OTTHUMG00000010982.3 19304 6049 34 ENSG00000240132.1 ETF1P2 chr7 151501878 151503463 + processed_pseudogene KNOWN OTTHUMG00000157354.1 1586 1586 1 ENSG00000106617.12 PRKAG2 chr7 151556111 151877125 - protein_coding KNOWN OTTHUMG00000157324.3 321015 6740 117 ENSG00000242048.3 RP13-452N2.1 chr7 151806490 151810820 + processed_transcript NOVEL OTTHUMG00000157325.3 4331 2390 5 ENSG00000239911.2 PRKAG2-AS1 chr7 151877042 151879223 + antisense NOVEL OTTHUMG00000157323.3 2182 1163 5 ENSG00000212219.1 RNU6-604P chr7 151900275 151900374 + snRNA KNOWN NA 100 100 1 ENSG00000222941.2 Y_RNA chr7 151916331 151916418 + misc_RNA NOVEL NA 88 88 1 ENSG00000227562.1 RP11-796I2.1 chr7 151950386 151954985 - antisense NOVEL OTTHUMG00000157305.1 4600 585 2 ENSG00000106648.12 GALNTL5 chr7 151956379 152019934 + protein_coding KNOWN OTTHUMG00000157306.3 63556 3325 87 ENSG00000276213.1 Metazoa_SRP chr7 152025194 152025472 - misc_RNA NOVEL NA 279 279 1 ENSG00000178234.11 GALNT11 chr7 152025674 152122347 + protein_coding KNOWN OTTHUMG00000157251.13 96674 8295 70 ENSG00000162694.12 EXTL2 chr1 100872372 100895998 - protein_coding KNOWN OTTHUMG00000011814.1 23627 4834 29 ENSG00000229591.1 RP5-981O7.2 chr7 152120001 152121717 - antisense NOVEL OTTHUMG00000157258.1 1717 673 2 ENSG00000213188.3 YBX1P4 chr7 152128879 152129686 + processed_pseudogene KNOWN OTTHUMG00000157256.1 808 808 1 ENSG00000055609.16 KMT2C chr7 152134922 152436005 - protein_coding KNOWN OTTHUMG00000150553.5 301084 20114 290 ENSG00000278435.1 AC104692.1 chr7 152267507 152267611 - miRNA NOVEL NA 105 105 1 ENSG00000270405.1 RP11-208G20.3 chr7 152366763 152367015 + processed_pseudogene KNOWN OTTHUMG00000184413.1 253 253 1 ENSG00000204894.4 RP11-208G20.2 chr7 152367171 152367260 + processed_pseudogene KNOWN OTTHUMG00000157524.1 90 90 1 ENSG00000241007.1 SEPT7P6 chr7 152367519 152368661 + processed_pseudogene KNOWN OTTHUMG00000157523.1 1143 1143 1 ENSG00000253088.1 Y_RNA chr7 152402780 152402893 + misc_RNA NOVEL NA 114 114 1 ENSG00000241735.1 FABP5P3 chr7 152436895 152443187 + transcribed_processed_pseudogene KNOWN OTTHUMG00000157257.1 6293 1027 3 ENSG00000221454.1 AC005631.1 chr7 152439221 152439308 + miRNA NOVEL NA 88 88 1 ENSG00000273204.1 RP4-549L20.3 chr1 100894928 100895356 + antisense NOVEL OTTHUMG00000186355.1 429 429 1 ENSG00000020219.9 CCT8L1P chr7 152445477 152447150 + processed_pseudogene KNOWN OTTHUMG00000157297.2 1674 1674 1 ENSG00000261455.1 LINC01003 chr7 152463786 152465549 + lincRNA NOVEL OTTHUMG00000173415.1 1764 1764 1 ENSG00000231139.1 AC104843.4 chr7 152590641 152590941 - unprocessed_pseudogene KNOWN OTTHUMG00000151468.1 301 297 2 ENSG00000199404.1 RNA5SP250 chr7 152592973 152593091 - rRNA KNOWN NA 119 119 1 ENSG00000225416.1 AC104843.3 chr7 152602213 152602892 - processed_pseudogene KNOWN OTTHUMG00000151469.2 680 319 2 ENSG00000212590.1 SNORA26 chr7 152609313 152609434 + snoRNA NOVEL NA 122 122 1 ENSG00000196584.2 XRCC2 chr7 152644779 152676165 - protein_coding KNOWN OTTHUMG00000151470.1 31387 4853 6 ENSG00000214003.2 ATP5F1P3 chr7 152749079 152749735 + processed_pseudogene KNOWN OTTHUMG00000151466.1 657 657 1 ENSG00000244328.3 RN7SL845P chr7 152757662 152757951 + misc_RNA KNOWN NA 290 290 1 ENSG00000133627.16 ACTR3B chr7 152759749 152855378 + protein_coding KNOWN OTTHUMG00000151463.3 95630 6024 46 ENSG00000162695.10 SLC30A7 chr1 100896076 100981753 + protein_coding KNOWN OTTHUMG00000011815.2 85678 8376 26 ENSG00000265275.1 AF104455.1 chr7 153056737 153056819 + miRNA NOVEL NA 83 83 1 ENSG00000224104.1 AC079809.2 chr7 153144313 153144588 - processed_pseudogene KNOWN OTTHUMG00000151465.1 276 276 1 ENSG00000234722.3 LINC01287 chr7 153399920 153413963 - lincRNA NOVEL OTTHUMG00000151464.3 14044 3487 8 ENSG00000233489.1 PAXBP1P1 chr7 153449429 153449875 + processed_pseudogene KNOWN OTTHUMG00000151475.1 447 447 1 ENSG00000130226.15 DPP6 chr7 153887097 154894285 + protein_coding KNOWN OTTHUMG00000151511.2 1007189 13574 151 ENSG00000226509.1 AC005588.2 chr7 153968665 153968826 - processed_pseudogene KNOWN OTTHUMG00000151521.1 162 162 1 ENSG00000281640.1 AC006019.1 chr7 154020657 154020737 + miRNA NOVEL NA 81 81 1 ENSG00000270114.1 RP5-1048B16.1 chr7 154026287 154038604 - antisense NOVEL OTTHUMG00000151520.1 12318 698 3 ENSG00000203335.4 AC006019.3 chr7 154055585 154059561 - antisense NOVEL OTTHUMG00000184017.1 3977 2470 2 ENSG00000233363.1 AC006019.4 chr7 154092201 154096043 - antisense NOVEL OTTHUMG00000151522.1 3843 3044 2 ENSG00000230946.3 HNRNPA1P68 chr1 100941017 100941995 - processed_pseudogene KNOWN OTTHUMG00000057599.2 979 979 1 ENSG00000236408.1 RP11-476H24.1 chr7 154838388 154865483 - antisense NOVEL OTTHUMG00000157286.1 27096 664 2 ENSG00000214106.6 PAXIP1-AS2 chr7 154928498 154949908 + antisense NOVEL OTTHUMG00000151324.1 21411 2974 16 ENSG00000157212.17 PAXIP1 chr7 154943687 155003084 - protein_coding KNOWN OTTHUMG00000151322.1 59398 9643 111 ENSG00000272760.1 RP11-5C23.1 chr7 154951226 154952188 + antisense NOVEL OTTHUMG00000186374.1 963 963 1 ENSG00000273183.1 RP11-5C23.2 chr7 154956429 154957107 + antisense NOVEL OTTHUMG00000186375.1 679 679 1 ENSG00000273344.1 PAXIP1-AS1 chr7 155003448 155005703 + lincRNA NOVEL OTTHUMG00000186376.1 2256 2256 1 ENSG00000220575.6 HTR5A-AS1 chr7 155067067 155071557 - antisense NOVEL OTTHUMG00000151326.1 4491 2730 4 ENSG00000157219.3 HTR5A chr7 155070324 155085749 + protein_coding KNOWN OTTHUMG00000151327.1 15426 3009 4 ENSG00000274637.1 RP11-279O22.1 chr7 155106062 155106400 - unprocessed_pseudogene KNOWN OTTHUMG00000187709.1 339 339 1 ENSG00000228806.1 AC092628.3 chr7 155106400 155106651 + unprocessed_pseudogene KNOWN OTTHUMG00000151329.1 252 252 1 ENSG00000117543.18 DPH5 chr1 100989623 101026088 - protein_coding KNOWN OTTHUMG00000010829.2 36466 2970 105 ENSG00000201066.1 RN7SKP280 chr7 155181881 155182184 + misc_RNA KNOWN NA 304 304 1 ENSG00000217825.2 AC099552.4 chr7 155196563 155198455 - lincRNA NOVEL OTTHUMG00000151325.1 1893 744 6 ENSG00000228521.2 AC099552.3 chr7 155204147 155205189 + lincRNA NOVEL OTTHUMG00000151323.1 1043 367 2 ENSG00000278998.1 RP11-1430O6.1 chr7 155222903 155223851 + TEC KNOWN OTTHUMG00000173309.1 949 949 1 ENSG00000225612.1 AC099552.2 chr7 155267299 155268052 + lincRNA NOVEL OTTHUMG00000151328.1 754 456 3 ENSG00000273117.1 AC144652.1 chr7 155295918 155297541 - lincRNA NOVEL OTTHUMG00000186379.1 1624 1624 1 ENSG00000186480.11 INSIG1 chr7 155297776 155310235 + protein_coding KNOWN OTTHUMG00000151330.3 12460 3650 26 ENSG00000204960.6 BLACE chr7 155356985 155367934 - protein_coding KNOWN OTTHUMG00000151351.1 10950 2456 7 ENSG00000218672.1 AC008060.7 chr7 155382076 155396356 + lincRNA NOVEL OTTHUMG00000151350.1 14281 1551 2 ENSG00000260426.1 RP5-912I13.1 chr7 155399922 155401782 + sense_overlapping NOVEL OTTHUMG00000173317.1 1861 1861 1 ENSG00000235795.1 RP11-421L21.2 chr1 100995473 100996260 + antisense NOVEL OTTHUMG00000010830.1 788 671 2 ENSG00000236544.1 AC008060.8 chr7 155421206 155457099 - lincRNA NOVEL OTTHUMG00000151348.1 35894 534 3 ENSG00000164778.4 EN2 chr7 155458129 155464831 + protein_coding KNOWN OTTHUMG00000151354.1 6703 3395 2 ENSG00000146910.10 CNPY1 chr7 155474206 155533862 - protein_coding KNOWN OTTHUMG00000151353.1 59657 2473 9 ENSG00000280862.1 AC008060.1 chr7 155478232 155478369 + miRNA NOVEL NA 138 138 1 ENSG00000227365.1 AC008060.5 chr7 155510283 155518623 + antisense NOVEL OTTHUMG00000151347.1 8341 468 2 ENSG00000216895.7 AC009403.2 chr7 155611231 155645205 - antisense NOVEL OTTHUMG00000151355.1 33975 1683 12 ENSG00000184863.9 RBM33 chr7 155644451 155781485 + protein_coding KNOWN OTTHUMG00000150260.5 137035 13132 74 ENSG00000164690.6 SHH chr7 155799986 155812273 - protein_coding KNOWN OTTHUMG00000151349.1 12288 5038 19 ENSG00000221113.1 AC104133.1 chr7 155871891 155872007 + miRNA NOVEL NA 117 117 1 ENSG00000204876.4 AC021218.2 chr7 155962632 155966343 + lincRNA NOVEL OTTHUMG00000151352.1 3712 2536 2 ENSG00000233184.5 RP11-421L21.3 chr1 101025878 101087268 + antisense NOVEL OTTHUMG00000010831.2 61391 2840 29 ENSG00000207061.1 Y_RNA chr7 156186122 156186223 - misc_RNA NOVEL NA 102 102 1 ENSG00000270584.1 RP11-362B23.1 chr7 156263547 156263802 + processed_pseudogene KNOWN OTTHUMG00000184411.1 256 256 1 ENSG00000228569.1 AC073133.2 chr7 156432523 156435833 - lincRNA NOVEL OTTHUMG00000151447.1 3311 432 2 ENSG00000233878.1 AC073133.1 chr7 156437789 156445588 - lincRNA NOVEL OTTHUMG00000151444.1 7800 2698 3 ENSG00000182648.10 LINC01006 chr7 156472196 156640654 - lincRNA KNOWN OTTHUMG00000157237.1 168459 3964 19 ENSG00000279418.1 LINC00244 chr7 156540491 156541103 + lincRNA KNOWN OTTHUMG00000189434.1 613 613 1 ENSG00000234450.1 AC005534.6 chr7 156633355 156633787 + processed_pseudogene KNOWN OTTHUMG00000151439.2 433 433 1 ENSG00000105982.15 RNF32 chr7 156640281 156677130 + protein_coding KNOWN OTTHUMG00000151440.2 36850 4371 95 ENSG00000224903.1 AC005534.8 chr7 156654185 156657693 - antisense NOVEL OTTHUMG00000151509.1 3509 742 2 ENSG00000105983.18 LMBR1 chr7 156668946 156893230 - protein_coding KNOWN OTTHUMG00000151510.7 224285 11819 161 ENSG00000252765.1 SCARNA16 chr1 101133153 101133339 + scaRNA NOVEL NA 187 187 1 ENSG00000206938.1 RNU4-31P chr7 156872078 156872218 + snRNA KNOWN NA 141 141 1 ENSG00000230033.1 RP5-1121A15.3 chr7 156944721 156945645 + lincRNA NOVEL OTTHUMG00000157190.1 925 531 2 ENSG00000146909.6 NOM1 chr7 156949723 156973182 + protein_coding KNOWN OTTHUMG00000152639.2 23460 7788 29 ENSG00000130675.13 MNX1 chr7 156994051 157010651 - protein_coding KNOWN OTTHUMG00000157181.3 16601 4202 19 ENSG00000235029.1 MNX1-AS2 chr7 157006307 157007132 + antisense NOVEL OTTHUMG00000187957.1 826 374 2 ENSG00000243479.3 MNX1-AS1 chr7 157010805 157016426 + lincRNA KNOWN OTTHUMG00000188695.1 5622 1041 2 ENSG00000236102.2 RP4-639J15.1 chr7 157057709 157058514 - lincRNA NOVEL OTTHUMG00000157191.2 806 432 2 ENSG00000229365.3 RP4-639J15.2 chr7 157087955 157088543 - processed_pseudogene KNOWN OTTHUMG00000157192.1 589 589 1 ENSG00000269446.2 RP4-639J15.3 chr7 157109980 157111072 + lincRNA NOVEL OTTHUMG00000187178.1 1093 1093 1 ENSG00000009335.16 UBE3C chr7 157138913 157269372 + protein_coding KNOWN OTTHUMG00000157239.1 130460 9220 65 ENSG00000280622.1 AC093157.1 chr1 101133263 101133340 + miRNA NOVEL NA 78 78 1 ENSG00000225224.1 RP4-814D15.2 chr7 157192368 157192832 + processed_pseudogene KNOWN OTTHUMG00000157241.1 465 465 1 ENSG00000236018.2 RP4-814D15.1 chr7 157197600 157198511 - processed_pseudogene KNOWN OTTHUMG00000157180.1 912 766 2 ENSG00000224629.1 RP5-1142J19.2 chr7 157263022 157263229 - processed_pseudogene KNOWN OTTHUMG00000157238.2 208 208 1 ENSG00000229660.1 RP5-1142J19.1 chr7 157281536 157282686 - lincRNA NOVEL OTTHUMG00000157240.1 1151 565 2 ENSG00000105993.13 DNAJB6 chr7 157335381 157417439 + protein_coding KNOWN OTTHUMG00000157242.4 82059 14981 108 ENSG00000234210.1 AC006372.4 chr7 157466231 157499716 + lincRNA NOVEL OTTHUMG00000152642.1 33486 4049 4 ENSG00000223872.1 AC006372.5 chr7 157501322 157503577 + lincRNA NOVEL OTTHUMG00000152645.1 2256 546 3 ENSG00000233191.1 AC006372.6 chr7 157513294 157516841 + antisense NOVEL OTTHUMG00000152640.1 3548 292 3 ENSG00000280266.1 RP11-331D5.2 chr7 157525783 157527325 + TEC KNOWN OTTHUMG00000187179.1 1543 1543 1 ENSG00000155093.16 PTPRN2 chr7 157539056 158587788 - protein_coding KNOWN OTTHUMG00000152646.2 1048733 4833 96 ENSG00000231868.1 RP1-202O8.2 chr1 6443034 6447006 - antisense NOVEL OTTHUMG00000000769.1 3973 351 3 ENSG00000271578.1 RP5-1033H2.1 chr1 101190520 101190994 + processed_pseudogene KNOWN OTTHUMG00000184301.1 475 475 1 ENSG00000207960.1 MIR153-2 chr7 157574336 157574422 - miRNA KNOWN NA 87 87 1 ENSG00000222012.1 AC005481.5 chr7 157614023 157618765 + antisense NOVEL OTTHUMG00000152643.2 4743 3456 2 ENSG00000231515.1 AC006003.3 chr7 157739010 157740456 - sense_intronic NOVEL OTTHUMG00000153023.1 1447 613 2 ENSG00000233038.4 AC011899.9 chr7 157854529 157866092 + antisense NOVEL OTTHUMG00000152644.2 11564 4662 11 ENSG00000272839.1 RP11-452C13.1 chr7 157868538 157869154 + antisense NOVEL OTTHUMG00000186392.1 617 617 1 ENSG00000231980.1 AC011899.10 chr7 158027373 158031128 + antisense NOVEL OTTHUMG00000152647.2 3756 3600 2 ENSG00000207637.1 MIR595 chr7 158532718 158532813 - miRNA KNOWN NA 96 96 1 ENSG00000225365.1 AC078942.1 chr7 158537495 158539879 + antisense NOVEL OTTHUMG00000152641.1 2385 589 2 ENSG00000232715.1 LINC01022 chr7 158590629 158591120 + antisense NOVEL OTTHUMG00000152648.1 492 394 2 ENSG00000265598.1 MIR5707 chr7 158591616 158591696 + miRNA KNOWN NA 81 81 1 ENSG00000225938.1 RP4-575N6.4 chr1 101235683 101236528 - antisense NOVEL OTTHUMG00000010942.1 846 403 2 ENSG00000224324.1 THAP5P1 chr7 158623188 158623449 - processed_pseudogene KNOWN OTTHUMG00000153022.1 262 262 1 ENSG00000146918.18 NCAPG2 chr7 158631311 158704829 - protein_coding KNOWN OTTHUMG00000151438.4 73519 6988 182 ENSG00000228030.2 AC019084.7 chr7 158719730 158720161 + processed_pseudogene KNOWN OTTHUMG00000151445.1 432 432 1 ENSG00000117868.14 ESYT2 chr7 158730995 158830253 - protein_coding KNOWN OTTHUMG00000151436.1 99259 7098 87 ENSG00000126870.14 WDR60 chr7 158856578 158956747 + protein_coding KNOWN OTTHUMG00000151443.2 100170 6667 73 ENSG00000231419.5 LINC00689 chr7 159006522 159030195 + processed_transcript NOVEL OTTHUMG00000151442.2 23674 9158 15 ENSG00000106018.12 VIPR2 chr7 159028175 159144957 - protein_coding KNOWN OTTHUMG00000151446.3 116783 5222 39 ENSG00000229435.2 PIP5K1P2 chr7 159231435 159233377 + unprocessed_pseudogene KNOWN OTTHUMG00000151313.1 1943 1120 3 ENSG00000253620.2 AC144568.4 chr8 64091 64320 - processed_pseudogene KNOWN OTTHUMG00000163938.2 230 137 2 ENSG00000253896.3 AC144568.2 chr8 72601 79775 + lincRNA NOVEL OTTHUMG00000163939.3 7175 972 4 ENSG00000170989.8 S1PR1 chr1 101236888 101241518 + protein_coding KNOWN OTTHUMG00000010835.1 4631 3071 6 ENSG00000254193.1 RP11-585F1.8 chr8 150584 150728 - processed_pseudogene KNOWN OTTHUMG00000163942.1 145 145 1 ENSG00000253612.1 WBP1LP3 chr8 155274 155481 + processed_pseudogene KNOWN OTTHUMG00000163907.2 208 208 1 ENSG00000176269.3 OR4F21 chr8 166049 167043 - protein_coding KNOWN OTTHUMG00000163908.1 995 995 1 ENSG00000255464.1 RP11-585F1.2 chr8 200385 200562 - unprocessed_pseudogene KNOWN OTTHUMG00000160541.5 178 178 1 ENSG00000253166.2 RP11-585F1.6 chr8 202660 202897 - unprocessed_pseudogene KNOWN OTTHUMG00000163919.2 238 164 2 ENSG00000223508.5 RPL23AP53 chr8 213186 232231 - transcribed_processed_pseudogene KNOWN OTTHUMG00000163943.2 19046 1023 7 ENSG00000172748.11 ZNF596 chr8 232137 247342 + protein_coding KNOWN OTTHUMG00000086931.6 15206 5385 61 ENSG00000272812.1 RP5-855D21.3 chr8 233119 233692 + sense_intronic NOVEL OTTHUMG00000185884.1 574 574 1 ENSG00000272240.1 RP5-855D21.1 chr8 234347 234887 - antisense NOVEL OTTHUMG00000185392.1 541 541 1 ENSG00000273402.1 RP5-855D21.2 chr8 237045 237669 + antisense NOVEL OTTHUMG00000185885.1 625 625 1 ENSG00000260940.1 RP4-575N6.5 chr1 101243158 101243749 + sense_overlapping NOVEL OTTHUMG00000175891.1 592 592 1 ENSG00000254104.2 RP11-63E5.1 chr8 264315 264672 + processed_pseudogene KNOWN OTTHUMG00000163921.2 358 358 1 ENSG00000249868.5 RP11-63E5.6 chr8 311133 331026 - lincRNA NOVEL OTTHUMG00000163924.2 19894 369 3 ENSG00000182366.8 FAM87A chr8 375931 383174 - lincRNA NOVEL OTTHUMG00000165513.3 7244 4531 11 ENSG00000147364.15 FBXO25 chr8 406428 477967 + protein_coding KNOWN OTTHUMG00000090341.7 71540 11438 60 ENSG00000272293.1 RP11-91J19.3 chr8 450714 451343 - antisense NOVEL OTTHUMG00000185394.1 630 630 1 ENSG00000279852.1 RP11-91J19.2 chr8 486117 488512 - TEC KNOWN OTTHUMG00000172751.1 2396 2396 1 ENSG00000180190.10 TDRP chr8 489792 545781 - protein_coding KNOWN OTTHUMG00000163593.2 55990 3613 19 ENSG00000104714.12 ERICH1 chr8 614746 738106 - protein_coding KNOWN OTTHUMG00000129163.4 123361 9726 37 ENSG00000254207.1 RP11-43A14.1 chr8 725188 725877 - sense_intronic NOVEL OTTHUMG00000163707.1 690 316 2 ENSG00000237647.7 ERICH1-AS1 chr8 737651 1137777 + antisense KNOWN OTTHUMG00000163635.2 400127 3677 17 ENSG00000228399.1 RP4-575N6.2 chr1 101256274 101256616 + processed_pseudogene KNOWN OTTHUMG00000010832.1 343 343 1 ENSG00000254269.4 CTD-2281E23.2 chr8 1104882 1262580 + processed_transcript NOVEL OTTHUMG00000163652.1 157699 814 9 ENSG00000254160.1 CTD-2281E23.3 chr8 1246789 1248760 - lincRNA NOVEL OTTHUMG00000163653.1 1972 446 3 ENSG00000275427.1 CTD-2281E23.1 chr8 1296034 1302607 - lincRNA NOVEL OTTHUMG00000163636.3 6574 3049 3 ENSG00000260721.1 AF067845.1 chr8 1368642 1369833 - lincRNA NOVEL OTTHUMG00000173256.1 1192 1192 1 ENSG00000198010.10 DLGAP2 chr8 1501366 1708476 + protein_coding KNOWN OTTHUMG00000163599.3 207111 10805 42 ENSG00000253267.4 DLGAP2-AS1 chr8 1565509 1622417 - antisense NOVEL OTTHUMG00000163600.1 56909 2062 7 ENSG00000254265.1 CTD-2336O2.2 chr8 1730206 1731452 + processed_pseudogene KNOWN OTTHUMG00000163657.1 1247 927 2 ENSG00000182372.6 CLN8 chr8 1755778 1786572 + protein_coding KNOWN OTTHUMG00000090343.3 30795 8111 16 ENSG00000253982.1 CTD-2336O2.1 chr8 1761990 1764502 - antisense NOVEL OTTHUMG00000163625.1 2513 1322 6 ENSG00000207826.1 MIR596 chr8 1817231 1817307 + miRNA KNOWN NA 77 77 1 ENSG00000173810.9 PPIAP7 chr1 101270875 101271363 - processed_pseudogene KNOWN OTTHUMG00000010833.2 489 489 1 ENSG00000104728.14 ARHGEF10 chr8 1823976 1958641 + protein_coding KNOWN OTTHUMG00000163626.2 134666 10792 200 ENSG00000253696.2 KBTBD11-OT1 chr8 1971397 1976478 + lincRNA NOVEL OTTHUMG00000163627.2 5082 815 3 ENSG00000253764.1 RP11-439C15.4 chr8 1972570 1974637 - lincRNA NOVEL OTTHUMG00000163628.1 2068 804 5 ENSG00000176595.3 KBTBD11 chr8 1973878 2006936 + protein_coding KNOWN OTTHUMG00000163629.1 33059 6710 2 ENSG00000270988.1 RP11-439C15.5 chr8 1974818 1975314 + lincRNA NOVEL OTTHUMG00000185113.1 497 497 1 ENSG00000253805.1 RP11-1049H7.2 chr8 2033508 2035587 + lincRNA NOVEL OTTHUMG00000163630.2 2080 412 2 ENSG00000036448.8 MYOM2 chr8 2045040 2165552 + protein_coding KNOWN OTTHUMG00000129175.7 120513 7062 126 ENSG00000273593.1 MIR7160 chr8 2076589 2076640 + miRNA KNOWN NA 52 52 1 ENSG00000253444.1 AC133633.2 chr8 2493876 2512580 - lincRNA NOVEL OTTHUMG00000163632.2 18705 512 3 ENSG00000253855.1 AC133633.1 chr8 2518998 2522182 + lincRNA NOVEL OTTHUMG00000163633.1 3185 559 3 ENSG00000231671.1 LINC01307 chr1 101323337 101390303 + lincRNA NOVEL OTTHUMG00000010834.1 66967 1238 9 ENSG00000277526.3 RP11-378A12.1 chr8 2589985 2623382 - lincRNA NOVEL OTTHUMG00000163607.3 33398 1722 10 ENSG00000254319.4 RP11-134O21.1 chr8 2666079 2728451 - lincRNA NOVEL OTTHUMG00000163608.2 62373 1674 25 ENSG00000253853.1 GS1-57L11.1 chr8 2727318 2822482 + lincRNA NOVEL OTTHUMG00000163609.1 95165 610 5 ENSG00000183117.16 CSMD1 chr8 2935353 4994972 - protein_coding KNOWN OTTHUMG00000163605.6 2059620 18705 469 ENSG00000281850.1 AC021523.1 chr8 3121968 3122060 - miRNA NOVEL NA 93 93 1 ENSG00000253162.1 RP11-279L11.1 chr8 3373353 3375226 - sense_intronic NOVEL OTTHUMG00000163650.1 1874 463 2 ENSG00000222546.1 RNA5SP251 chr8 3700492 3700628 + rRNA KNOWN NA 137 137 1 ENSG00000254244.1 PAICSP4 chr8 4787332 4788584 + processed_pseudogene KNOWN OTTHUMG00000163651.1 1253 1253 1 ENSG00000253262.1 RP11-221H10.1 chr8 5072645 5072869 - processed_pseudogene KNOWN OTTHUMG00000163696.1 225 225 1 ENSG00000273876.1 RP11-221H10.2 chr8 5127919 5128233 - unprocessed_pseudogene KNOWN OTTHUMG00000187693.1 315 315 1 ENSG00000226715.1 RP11-411H5.1 chr1 101723742 101729614 + lincRNA PUTATIVE OTTHUMG00000010944.1 5873 478 2 ENSG00000206661.1 SNORA70 chr8 5128279 5128412 - snoRNA NOVEL NA 134 134 1 ENSG00000242079.1 RN7SL318P chr8 5142411 5142707 - misc_RNA KNOWN NA 297 297 1 ENSG00000278256.1 RP11-29A2.1 chr8 5363371 5363650 + unprocessed_pseudogene KNOWN OTTHUMG00000187694.1 280 280 1 ENSG00000271248.1 RP11-745K9.2 chr8 5455218 5455665 - processed_pseudogene KNOWN OTTHUMG00000184705.1 448 448 1 ENSG00000240486.2 RPL23AP54 chr8 5476548 5476966 + processed_pseudogene KNOWN OTTHUMG00000158103.3 419 419 1 ENSG00000253510.1 RP5-991O23.1 chr8 5506068 5509126 - lincRNA NOVEL OTTHUMG00000163612.1 3059 3059 1 ENSG00000254007.1 RP11-281H11.1 chr8 5659679 5670077 - lincRNA NOVEL OTTHUMG00000163613.1 10399 923 3 ENSG00000275461.1 RP11-281H11.2 chr8 5716584 5716804 + unprocessed_pseudogene KNOWN OTTHUMG00000187695.1 221 221 1 ENSG00000253571.1 RP11-728L1.1 chr8 5848697 5849692 + processed_pseudogene KNOWN OTTHUMG00000163614.3 996 996 1 ENSG00000222589.1 RN7SKP159 chr8 5910945 5911236 - misc_RNA KNOWN NA 292 292 1 ENSG00000252530.1 RNU6-965P chr1 101728642 101728737 - snRNA KNOWN NA 96 96 1 ENSG00000274464.1 AC079054.1 chr8 5951206 5951330 - miRNA NOVEL NA 125 125 1 ENSG00000253189.1 RP11-158A14.1 chr8 6036433 6036974 - lincRNA NOVEL OTTHUMG00000163615.1 542 331 3 ENSG00000253880.1 RP11-124B13.1 chr8 6044353 6257537 - lincRNA NOVEL OTTHUMG00000163616.1 213185 574 5 ENSG00000246089.3 RP11-115C21.2 chr8 6403551 6407142 - antisense NOVEL OTTHUMG00000163617.3 3592 2934 6 ENSG00000147316.11 MCPH1 chr8 6406592 6648504 + protein_coding KNOWN OTTHUMG00000163618.5 241913 9775 44 ENSG00000253550.1 RP11-115C21.4 chr8 6473845 6474288 - processed_pseudogene KNOWN OTTHUMG00000163697.1 444 444 1 ENSG00000091879.12 ANGPT2 chr8 6499651 6563409 - protein_coding KNOWN OTTHUMG00000090365.3 63759 6775 34 ENSG00000271743.1 CTD-2541M15.3 chr8 6615604 6617198 - lincRNA NOVEL OTTHUMG00000185396.1 1595 1595 1 ENSG00000249898.6 CTD-2541M15.1 chr8 6618475 6708209 - antisense NOVEL OTTHUMG00000163619.3 89735 3046 14 ENSG00000276580.1 MIR8055 chr8 6622124 6622220 - miRNA KNOWN NA 97 97 1 ENSG00000183298.5 RP11-556K13.1 chr1 101786340 101787219 - processed_pseudogene KNOWN OTTHUMG00000010943.1 880 880 1 ENSG00000155189.10 AGPAT5 chr8 6708357 6759666 + protein_coding KNOWN OTTHUMG00000163656.4 51310 4684 31 ENSG00000266038.1 MIR4659B chr8 6745164 6745244 + miRNA KNOWN NA 81 81 1 ENSG00000275591.3 XKR5 chr8 6808517 6835644 - protein_coding KNOWN OTTHUMG00000153652.4 27128 5031 15 ENSG00000245857.2 GS1-24F4.2 chr8 6835554 6885276 + lincRNA NOVEL OTTHUMG00000165210.1 49723 1433 6 ENSG00000164825.3 DEFB1 chr8 6870575 6878022 - protein_coding KNOWN OTTHUMG00000090367.2 7448 478 2 ENSG00000250752.2 GS1-24F4.1 chr8 6898878 6899468 - processed_pseudogene KNOWN OTTHUMG00000160431.2 591 591 1 ENSG00000164822.4 DEFA6 chr8 6924693 6926076 - protein_coding KNOWN OTTHUMG00000149984.1 1384 469 2 ENSG00000254625.1 GS1-24F4.3 chr8 6928608 6930473 + antisense NOVEL OTTHUMG00000165211.1 1866 401 3 ENSG00000164821.4 DEFA4 chr8 6935822 6938338 - protein_coding KNOWN OTTHUMG00000090382.1 2517 617 3 ENSG00000223629.1 DEFA8P chr8 6950726 6951599 - unprocessed_pseudogene KNOWN OTTHUMG00000150024.1 874 285 2 ENSG00000215788.8 TNFRSF25 chr1 6461151 6466195 - protein_coding KNOWN OTTHUMG00000000831.6 5045 3918 134 ENSG00000118733.15 OLFM3 chr1 101802574 101997030 - protein_coding KNOWN OTTHUMG00000010941.2 194457 4483 37 ENSG00000233238.1 DEFA9P chr8 6959289 6960161 - unprocessed_pseudogene KNOWN OTTHUMG00000150021.1 873 285 2 ENSG00000233531.1 DEFA10P chr8 6968141 6969113 - unprocessed_pseudogene KNOWN OTTHUMG00000150022.1 973 288 2 ENSG00000206047.2 DEFA1 chr8 6977649 6980080 - protein_coding KNOWN OTTHUMG00000154594.1 2432 486 5 ENSG00000215378.3 DEFT1P chr8 6987178 6989721 - unprocessed_pseudogene KNOWN OTTHUMG00000149997.3 2544 496 3 ENSG00000240247.5 DEFA1B chr8 6996766 7018289 - protein_coding KNOWN OTTHUMG00000149850.3 21524 559 6 ENSG00000239839.4 DEFA3 chr8 6996837 7018301 - protein_coding KNOWN OTTHUMG00000090381.2 21465 658 6 ENSG00000232039.2 DEFT1P2 chr8 7006293 7007389 - unprocessed_pseudogene KNOWN OTTHUMG00000150570.1 1097 421 2 ENSG00000234178.1 DEFA11P chr8 7028641 7029489 - unprocessed_pseudogene KNOWN OTTHUMG00000150023.2 849 261 2 ENSG00000206042.1 DEFA7P chr8 7038571 7039439 - unprocessed_pseudogene KNOWN OTTHUMG00000143737.1 869 285 2 ENSG00000164816.7 DEFA5 chr8 7055304 7056734 - protein_coding KNOWN OTTHUMG00000090383.2 1431 449 2 ENSG00000252717.1 RNU6-352P chr1 101859851 101859957 + snRNA KNOWN NA 107 107 1 ENSG00000255273.1 AF238378.7 chr8 7082971 7083328 + processed_pseudogene KNOWN OTTHUMG00000165380.1 358 358 1 ENSG00000234120.1 AF228730.8 chr8 7112314 7113728 - processed_pseudogene KNOWN OTTHUMG00000150581.1 1415 183 3 ENSG00000216206.1 AF228730.1 chr8 7115899 7116048 - miRNA NOVEL NA 150 150 1 ENSG00000228744.1 RPS3AP30 chr8 7122857 7123704 + processed_pseudogene KNOWN OTTHUMG00000150575.1 848 848 1 ENSG00000254683.1 SNRPCP6 chr8 7143632 7143841 - processed_pseudogene KNOWN OTTHUMG00000165381.2 210 210 1 ENSG00000230106.1 SNRPCP15 chr8 7170550 7170741 + processed_pseudogene KNOWN OTTHUMG00000150580.2 192 192 1 ENSG00000214268.2 RPS3AP33 chr8 7190901 7191563 - processed_pseudogene KNOWN OTTHUMG00000149981.2 663 663 1 ENSG00000221567.1 AF228730.2 chr8 7198440 7198588 + miRNA NOVEL NA 149 149 1 ENSG00000231930.1 AF228730.5 chr8 7200756 7200857 + processed_pseudogene KNOWN OTTHUMG00000150577.1 102 102 1 ENSG00000255025.1 AF228730.13 chr8 7238286 7238631 - processed_pseudogene KNOWN OTTHUMG00000165382.2 346 346 1 ENSG00000271277.1 RP11-82O2.2 chr1 101882516 101882894 + processed_pseudogene KNOWN OTTHUMG00000184310.1 379 379 1 ENSG00000177306.4 OR7E125P chr8 7246726 7247571 - unprocessed_pseudogene KNOWN OTTHUMG00000150380.1 846 846 1 ENSG00000230045.4 FAM90A15P chr8 7256904 7259914 + unprocessed_pseudogene KNOWN OTTHUMG00000160360.1 3011 1395 4 ENSG00000233132.4 FAM90A3P chr8 7264526 7267536 + unprocessed_pseudogene KNOWN OTTHUMG00000160359.2 3011 1395 4 ENSG00000249005.3 FAM90A4P chr8 7272148 7275158 + unprocessed_pseudogene KNOWN OTTHUMG00000160358.2 3011 1395 4 ENSG00000223885.4 FAM90A13P chr8 7279770 7282780 + unprocessed_pseudogene KNOWN OTTHUMG00000165212.1 3011 1395 4 ENSG00000215373.4 FAM90A5P chr8 7287392 7290402 + unprocessed_pseudogene KNOWN OTTHUMG00000165213.1 3011 1395 4 ENSG00000233295.3 FAM90A20P chr8 7295014 7298024 + unprocessed_pseudogene KNOWN OTTHUMG00000165214.1 3011 1395 4 ENSG00000215374.5 FAM66B chr8 7301611 7355354 - lincRNA NOVEL OTTHUMG00000165383.2 53744 3339 13 ENSG00000206034.1 DEFB109P1B chr8 7312846 7319951 + unprocessed_pseudogene KNOWN OTTHUMG00000149982.2 7106 264 2 ENSG00000230549.3 USP17L1 chr8 7332387 7333979 + protein_coding KNOWN OTTHUMG00000150578.2 1593 1593 1 ENSG00000162699.5 DNAJA1P5 chr1 101893105 101894047 + processed_pseudogene KNOWN OTTHUMG00000010945.2 943 943 1 ENSG00000236125.3 USP17L4 chr8 7337115 7338707 + protein_coding KNOWN OTTHUMG00000150574.2 1593 1593 1 ENSG00000235778.1 AC130360.8 chr8 7341826 7342942 + unprocessed_pseudogene KNOWN OTTHUMG00000150576.1 1117 1117 1 ENSG00000215372.6 ZNF705G chr8 7355517 7385558 - protein_coding KNOWN OTTHUMG00000165384.1 30042 3644 7 ENSG00000215371.3 DEFB108P2 chr8 7373114 7377500 + unprocessed_pseudogene KNOWN OTTHUMG00000143856.2 4387 252 2 ENSG00000177257.2 DEFB4B chr8 7414860 7416863 - protein_coding KNOWN OTTHUMG00000143857.3 2004 332 2 ENSG00000255128.1 HSPD1P3 chr8 7418991 7420546 + processed_pseudogene KNOWN OTTHUMG00000165385.1 1556 1556 1 ENSG00000177243.3 DEFB103B chr8 7428888 7430348 - protein_coding KNOWN OTTHUMG00000129313.2 1461 518 2 ENSG00000164871.16 SPAG11B chr8 7442684 7463674 - protein_coding KNOWN OTTHUMG00000129219.4 20991 1973 29 ENSG00000177023.2 DEFB104B chr8 7470308 7475082 - protein_coding KNOWN OTTHUMG00000149986.1 4775 281 2 ENSG00000187082.2 DEFB106B chr8 7482504 7486400 - protein_coding KNOWN OTTHUMG00000129312.1 3897 316 2 ENSG00000233359.1 RP11-202K23.1 chr1 102199739 102389630 - lincRNA NOVEL OTTHUMG00000010865.1 189892 657 6 ENSG00000186599.7 DEFB105B chr8 7487669 7489593 + protein_coding KNOWN OTTHUMG00000129315.2 1925 331 3 ENSG00000198129.2 DEFB107B chr8 7495846 7509311 + protein_coding KNOWN OTTHUMG00000149987.1 13466 389 2 ENSG00000255251.1 PRR23D1 chr8 7539628 7542450 + protein_coding KNOWN OTTHUMG00000165386.1 2823 1587 4 ENSG00000248944.1 FAM90A6P chr8 7549053 7552062 - unprocessed_pseudogene KNOWN OTTHUMG00000150266.1 3010 1394 4 ENSG00000236660.6 FAM90A7P chr8 7556700 7559712 - unprocessed_pseudogene KNOWN OTTHUMG00000150263.2 3013 1395 4 ENSG00000234749.5 FAM90A21P chr8 7564350 7567360 - unprocessed_pseudogene KNOWN OTTHUMG00000150264.1 3011 1396 4 ENSG00000215365.4 FAM90A22P chr8 7571995 7575006 - unprocessed_pseudogene KNOWN OTTHUMG00000150262.2 3012 1395 4 ENSG00000241737.2 FAM90A23P chr8 7579644 7582653 - unprocessed_pseudogene KNOWN OTTHUMG00000150265.3 3010 1395 4 ENSG00000233176.3 OR7E157P chr8 7592006 7592916 + unprocessed_pseudogene KNOWN OTTHUMG00000150579.1 911 911 1 ENSG00000254796.1 RP11-1118M6.2 chr8 7601004 7601267 + processed_pseudogene KNOWN OTTHUMG00000165387.2 264 264 1 ENSG00000230864.1 RP5-936J12.1 chr1 102763322 102853842 - lincRNA NOVEL OTTHUMG00000010873.2 90521 931 7 ENSG00000254889.1 AC084121.14 chr8 7696830 7697093 - processed_pseudogene KNOWN OTTHUMG00000165388.2 264 264 1 ENSG00000254715.3 OR7E154P chr8 7705182 7706113 - unprocessed_pseudogene KNOWN OTTHUMG00000165389.1 932 932 1 ENSG00000189393.5 FAM90A14P chr8 7715443 7718453 + unprocessed_pseudogene KNOWN OTTHUMG00000165390.1 3011 1395 4 ENSG00000231656.4 FAM90A18P chr8 7723091 7726101 + unprocessed_pseudogene KNOWN OTTHUMG00000165391.1 3011 1395 4 ENSG00000229477.3 FAM90A16P chr8 7730739 7733749 + unprocessed_pseudogene KNOWN OTTHUMG00000165392.1 3011 1395 4 ENSG00000224710.3 FAM90A8P chr8 7738387 7741396 + unprocessed_pseudogene KNOWN OTTHUMG00000165393.1 3010 1395 4 ENSG00000223535.4 FAM90A17P chr8 7746034 7749606 + unprocessed_pseudogene KNOWN OTTHUMG00000165394.1 3573 1957 4 ENSG00000237122.3 FAM90A19P chr8 7753682 7756692 + unprocessed_pseudogene KNOWN OTTHUMG00000165395.1 3011 1395 4 ENSG00000235825.3 FAM90A9P chr8 7761330 7764340 + unprocessed_pseudogene KNOWN OTTHUMG00000165396.1 3011 1395 4 ENSG00000254597.1 FAM90A10P chr8 7768977 7771988 + unprocessed_pseudogene KNOWN OTTHUMG00000165397.1 3012 1395 4 ENSG00000060718.17 COL11A1 chr1 102876467 103108496 - protein_coding KNOWN OTTHUMG00000010872.5 232030 8265 305 ENSG00000255378.1 PRR23D2 chr8 7778591 7781413 - protein_coding KNOWN OTTHUMG00000165398.1 2823 1587 4 ENSG00000254776.1 AC084121.17 chr8 7793716 7795870 - unprocessed_pseudogene KNOWN OTTHUMG00000165399.1 2155 835 4 ENSG00000186572.2 DEFB107A chr8 7811720 7815716 - protein_coding KNOWN OTTHUMG00000150013.1 3997 389 2 ENSG00000186562.7 DEFB105A chr8 7821966 7823889 - protein_coding KNOWN OTTHUMG00000150011.2 1924 330 3 ENSG00000186579.2 DEFB106A chr8 7825172 7829053 + protein_coding KNOWN OTTHUMG00000150012.1 3882 303 2 ENSG00000176782.2 DEFB104A chr8 7836471 7841242 + protein_coding KNOWN OTTHUMG00000150014.1 4772 281 2 ENSG00000178287.16 SPAG11A chr8 7847876 7868867 + protein_coding KNOWN OTTHUMG00000162440.2 20992 1973 26 ENSG00000176797.3 DEFB103A chr8 7881204 7882664 + protein_coding KNOWN OTTHUMG00000143855.2 1461 518 2 ENSG00000254543.1 HSPD1P2 chr8 7891003 7892555 - processed_pseudogene KNOWN OTTHUMG00000165400.1 1553 1553 1 ENSG00000171711.2 DEFB4A chr8 7894629 7896711 + protein_coding KNOWN OTTHUMG00000129314.1 2083 380 2 ENSG00000234257.1 SOD2P1 chr1 103100143 103100704 - processed_pseudogene KNOWN OTTHUMG00000010923.1 562 562 1 ENSG00000215356.4 ZNF705B chr8 7926337 7952413 + protein_coding KNOWN OTTHUMG00000165401.1 26077 1207 7 ENSG00000229907.3 DEFB108P1 chr8 7934412 7938770 - unprocessed_pseudogene KNOWN OTTHUMG00000165402.1 4359 222 2 ENSG00000225725.4 FAM66E chr8 7955014 8008755 + lincRNA KNOWN OTTHUMG00000165403.3 53742 2841 15 ENSG00000255211.1 RP11-1195F20.7 chr8 7967344 7968544 - unprocessed_pseudogene KNOWN OTTHUMG00000165404.1 1201 1201 1 ENSG00000237038.4 USP17L8 chr8 7971661 7977985 - protein_coding KNOWN OTTHUMG00000165405.2 6325 2370 3 ENSG00000225327.3 USP17L3 chr8 7976393 7977985 - protein_coding KNOWN OTTHUMG00000165406.2 1593 1593 1 ENSG00000205989.1 DEFB109P1B chr8 7990415 7997521 - unprocessed_pseudogene KNOWN OTTHUMG00000150018.2 7107 264 2 ENSG00000233115.4 FAM90A11P chr8 8011782 8017011 - unprocessed_pseudogene KNOWN OTTHUMG00000163639.1 5230 2218 5 ENSG00000215354.8 FAM90A24P chr8 8019429 8024652 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000163642.1 5224 2379 9 ENSG00000254229.2 FAM90A12P chr8 8027077 8032305 - unprocessed_pseudogene KNOWN OTTHUMG00000163643.1 5229 2375 6 ENSG00000230759.1 RP11-153F1.2 chr1 103414879 103425465 + lincRNA NOVEL OTTHUMG00000041349.1 10587 418 2 ENSG00000227013.3 OR7E96P chr8 8039978 8040953 + unprocessed_pseudogene KNOWN OTTHUMG00000165410.1 976 976 1 ENSG00000253881.1 RP11-52B19.8 chr8 8048919 8049267 + processed_pseudogene KNOWN OTTHUMG00000164248.2 349 349 1 ENSG00000255459.1 RP11-52B19.10 chr8 8086022 8086765 - processed_pseudogene KNOWN OTTHUMG00000165411.1 744 744 1 ENSG00000221305.1 MIR548I3 chr8 8088941 8089089 - miRNA KNOWN NA 149 149 1 ENSG00000244427.1 RP11-52B19.1 chr8 8095946 8096726 + processed_pseudogene KNOWN OTTHUMG00000158109.1 781 781 1 ENSG00000254311.1 SNRPCP17 chr8 8116745 8116949 - processed_pseudogene KNOWN OTTHUMG00000163645.1 205 205 1 ENSG00000249188.1 ENPP7P1 chr8 8154308 8216916 + unprocessed_pseudogene KNOWN OTTHUMG00000160501.1 62609 999 3 ENSG00000253893.2 FAM85B chr8 8167819 8226614 - antisense NOVEL OTTHUMG00000163729.2 58796 792 5 ENSG00000268955.2 RP11-556O5.6 chr8 8188535 8189195 - lincRNA NOVEL OTTHUMG00000187186.1 661 661 1 ENSG00000173295.6 FAM86B3P chr8 8228595 8244865 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000163669.6 16271 4870 34 ENSG00000224613.5 RP11-153F1.1 chr1 103418079 103525483 - antisense NOVEL OTTHUMG00000041348.2 107405 638 9 ENSG00000253981.4 ALG1L13P chr8 8236003 8244667 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000163708.2 8665 1447 20 ENSG00000275342.3 SGK223 chr8 8317736 8386498 - protein_coding KNOWN OTTHUMG00000163709.3 68763 4904 11 ENSG00000253505.1 CTA-398F10.1 chr8 8414690 8424632 - lincRNA NOVEL OTTHUMG00000163730.1 9943 1147 4 ENSG00000254153.1 CTA-398F10.2 chr8 8456909 8461337 - lincRNA NOVEL OTTHUMG00000163731.1 4429 510 3 ENSG00000253343.1 CTD-3023L14.3 chr8 8555738 8560965 - lincRNA NOVEL OTTHUMG00000163671.1 5228 397 2 ENSG00000253774.1 CTD-3023L14.1 chr8 8559894 8562124 + lincRNA NOVEL OTTHUMG00000163672.1 2231 579 3 ENSG00000253130.1 CTD-3023L14.2 chr8 8561391 8569688 + lincRNA NOVEL OTTHUMG00000163673.2 8298 1075 4 ENSG00000263616.2 RN7SL178P chr8 8582352 8582655 - misc_RNA KNOWN NA 304 304 1 ENSG00000281480.1 AC114550.1 chr8 8582352 8582427 - miRNA NOVEL NA 76 76 1 ENSG00000264445.1 AC087269.1 chr8 8633464 8633548 + miRNA NOVEL NA 85 85 1 ENSG00000171680.19 PLEKHG5 chr1 6466092 6520061 - protein_coding KNOWN OTTHUMG00000000905.3 53970 6920 243 ENSG00000222069.1 RN7SKP285 chr1 103523562 103523879 + misc_RNA KNOWN NA 318 318 1 ENSG00000253958.1 CLDN23 chr8 8701938 8704106 + protein_coding KNOWN OTTHUMG00000163674.1 2169 2169 1 ENSG00000254367.4 RP11-211C9.1 chr8 8723693 8782479 - lincRNA NOVEL OTTHUMG00000163675.1 58787 925 7 ENSG00000147324.9 MFHAS1 chr8 8783354 8893645 - protein_coding KNOWN OTTHUMG00000163676.2 110292 6883 14 ENSG00000200713.1 RNU6-682P chr8 8895813 8895918 + snRNA KNOWN NA 106 106 1 ENSG00000270966.1 RP11-62H7.3 chr8 8933721 8934006 - processed_pseudogene KNOWN OTTHUMG00000184741.1 286 286 1 ENSG00000233609.3 RP11-62H7.2 chr8 8961200 8979025 + transcribed_processed_pseudogene KNOWN OTTHUMG00000163695.1 17826 1442 6 ENSG00000207244.1 SNORA70 chr8 8961575 8961708 + snoRNA NOVEL NA 134 134 1 ENSG00000104626.13 ERI1 chr8 9002147 9116746 + protein_coding KNOWN OTTHUMG00000129328.5 114600 6385 49 ENSG00000263407.1 MIR4660 chr8 9048445 9048518 + miRNA KNOWN NA 74 74 1 ENSG00000239078.1 RNU7-55P chr8 9072455 9072516 - snRNA KNOWN NA 62 62 1 ENSG00000185946.14 RNPC3 chr1 103525691 103555239 + protein_coding KNOWN OTTHUMG00000166613.2 29549 6867 76 ENSG00000197334.2 Metazoa_SRP chr8 9091240 9091508 + misc_RNA NOVEL NA 269 269 1 ENSG00000173281.4 PPP1R3B chr8 9136255 9151574 - protein_coding KNOWN OTTHUMG00000129329.2 15320 5776 4 ENSG00000254340.1 RP11-10A14.3 chr8 9141424 9145435 + antisense NOVEL OTTHUMG00000163659.2 4012 651 5 ENSG00000253426.4 RP11-10A14.4 chr8 9151742 9168136 + lincRNA NOVEL OTTHUMG00000163660.2 16395 1073 11 ENSG00000279949.1 RP11-10A14.9 chr8 9158063 9158621 + lincRNA NOVEL OTTHUMG00000189230.1 559 559 1 ENSG00000253252.2 RP11-10A14.6 chr8 9180251 9182519 - lincRNA NOVEL OTTHUMG00000163664.2 2269 328 2 ENSG00000248538.5 RP11-10A14.5 chr8 9189011 9202854 + lincRNA NOVEL OTTHUMG00000163661.2 13844 875 11 ENSG00000254091.2 RP11-10A14.8 chr8 9233013 9233449 + processed_pseudogene KNOWN OTTHUMG00000163732.2 437 437 1 ENSG00000254235.4 RP11-115J16.1 chr8 9249417 9413714 + lincRNA NOVEL OTTHUMG00000163665.2 164298 5060 16 ENSG00000253887.1 RP11-10A14.7 chr8 9255349 9260295 - lincRNA NOVEL OTTHUMG00000163666.1 4947 422 2 ENSG00000240038.5 AMY2B chr1 103553815 103579534 + protein_coding KNOWN OTTHUMG00000011024.5 25720 7491 53 ENSG00000207415.1 RNU6-1151P chr8 9287472 9287578 - snRNA KNOWN NA 107 107 1 ENSG00000253735.1 RP11-115J16.3 chr8 9351238 9358441 - lincRNA NOVEL OTTHUMG00000163667.1 7204 563 3 ENSG00000201815.1 RNU6-526P chr8 9371090 9371195 - snRNA KNOWN NA 106 106 1 ENSG00000254237.4 RP11-115J16.2 chr8 9371970 9436205 - lincRNA NOVEL OTTHUMG00000163668.1 64236 1525 10 ENSG00000249050.1 RP11-375N15.1 chr8 9453698 9457418 + processed_pseudogene KNOWN OTTHUMG00000160394.1 3721 2035 4 ENSG00000272267.2 RP11-375N15.2 chr8 9555144 9556520 - antisense NOVEL OTTHUMG00000185402.2 1377 1377 1 ENSG00000173273.14 TNKS chr8 9555914 9782346 + protein_coding KNOWN OTTHUMG00000090481.3 226433 14186 106 ENSG00000253697.1 RP11-1081K18.1 chr8 9658295 9658438 - processed_pseudogene KNOWN OTTHUMG00000163733.1 144 144 1 ENSG00000207701.1 MIR597 chr8 9741672 9741768 + miRNA KNOWN NA 97 97 1 ENSG00000253230.5 LINC00599 chr8 9900064 9905366 - lincRNA NOVEL OTTHUMG00000163734.2 5303 4136 13 ENSG00000236085.1 ACTG1P4 chr1 103569553 103570674 + processed_pseudogene KNOWN OTTHUMG00000011022.1 1122 1122 1 ENSG00000275677.1 MIR124-1 chr8 9903388 9903472 - miRNA KNOWN NA 85 85 1 ENSG00000260093.1 RP11-1E4.1 chr8 10050485 10054254 - antisense NOVEL OTTHUMG00000163777.1 3770 3770 1 ENSG00000175806.13 MSRA chr8 10054268 10428891 + protein_coding KNOWN OTTHUMG00000090517.6 374624 4162 50 ENSG00000221320.1 AC023385.1 chr8 10087921 10088031 + miRNA NOVEL NA 111 111 1 ENSG00000249848.1 RP11-212F11.1 chr8 10336782 10337677 - processed_pseudogene KNOWN OTTHUMG00000160435.1 896 575 2 ENSG00000261451.1 RP11-981G7.1 chr8 10433672 10438312 + sense_overlapping NOVEL OTTHUMG00000163781.2 4641 4641 1 ENSG00000253641.4 RP11-981G7.2 chr8 10474565 10481974 + lincRNA NOVEL OTTHUMG00000163782.1 7410 1271 12 ENSG00000207128.1 RNU6-729P chr8 10476223 10476329 + snRNA KNOWN NA 107 107 1 ENSG00000253678.1 RP11-981G7.3 chr8 10477491 10479375 - lincRNA NOVEL OTTHUMG00000163804.1 1885 489 2 ENSG00000253649.2 PRSS51 chr8 10482878 10547585 - antisense NOVEL OTTHUMG00000163805.2 64708 1245 8 ENSG00000243480.6 AMY2A chr1 103616811 103625780 + protein_coding KNOWN OTTHUMG00000011023.2 8970 1898 30 ENSG00000272505.1 RP11-981G7.6 chr8 10486807 10489666 + lincRNA NOVEL OTTHUMG00000185404.1 2860 2860 1 ENSG00000184647.9 PRSS55 chr8 10525546 10554166 + protein_coding KNOWN OTTHUMG00000129345.4 28621 3135 15 ENSG00000183638.5 RP1L1 chr8 10606349 10712187 - protein_coding KNOWN OTTHUMG00000163806.1 105839 8881 7 ENSG00000263762.1 MIR4286 chr8 10666978 10667070 + miRNA KNOWN NA 93 93 1 ENSG00000171060.9 C8orf74 chr8 10672637 10700593 + protein_coding KNOWN OTTHUMG00000163807.2 27957 5346 25 ENSG00000212433.1 RNA5SP252 chr8 10686569 10686687 + rRNA KNOWN NA 119 119 1 ENSG00000171056.7 SOX7 chr8 10723768 10730512 - protein_coding KNOWN OTTHUMG00000090585.1 6745 3216 2 ENSG00000258724.1 CTD-2135J3.4 chr8 10725399 10839847 - protein_coding PUTATIVE OTTHUMG00000171787.1 114449 1753 6 ENSG00000248896.2 CTD-2135J3.3 chr8 10729314 10771392 + antisense NOVEL OTTHUMG00000163821.1 42079 1019 5 ENSG00000254093.7 PINX1 chr8 10764963 10839884 - protein_coding NOVEL OTTHUMG00000163808.3 74922 2802 40 ENSG00000237763.8 AMY1A chr1 103655290 103664554 + protein_coding KNOWN OTTHUMG00000011020.6 9265 2505 27 ENSG00000253695.1 RP11-177H2.2 chr8 10840576 10846501 + antisense NOVEL OTTHUMG00000163822.1 5926 439 3 ENSG00000280294.1 RP11-177H2.1 chr8 10856085 10859436 - TEC KNOWN OTTHUMG00000163823.1 3352 3352 1 ENSG00000171044.9 XKR6 chr8 10896045 11201366 - protein_coding KNOWN OTTHUMG00000129351.5 305322 5209 11 ENSG00000207600.2 MIR598 chr8 11035201 11035312 - miRNA KNOWN NA 112 112 1 ENSG00000254839.1 AF131215.6 chr8 11062647 11067089 - lincRNA NOVEL OTTHUMG00000165422.1 4443 639 2 ENSG00000269918.1 AF131215.9 chr8 11104691 11106704 - sense_intronic NOVEL OTTHUMG00000184046.1 2014 2014 1 ENSG00000255310.2 AF131215.2 chr8 11107788 11109726 - sense_intronic NOVEL OTTHUMG00000165424.2 1939 1939 1 ENSG00000254936.4 AF131215.3 chr8 11123381 11126064 - sense_intronic NOVEL OTTHUMG00000165425.2 2684 1741 2 ENSG00000254556.1 AF131215.4 chr8 11136898 11138607 - sense_intronic NOVEL OTTHUMG00000165426.1 1710 1710 1 ENSG00000231965.4 AF131215.1 chr8 11175051 11175570 + processed_pseudogene KNOWN OTTHUMG00000158111.2 520 520 1 ENSG00000234441.1 RP5-1108M17.5 chr1 103668071 103668268 - unprocessed_pseudogene KNOWN OTTHUMG00000011025.1 198 198 1 ENSG00000270076.1 AF131215.8 chr8 11202965 11203671 + lincRNA NOVEL OTTHUMG00000183970.1 707 707 1 ENSG00000236827.1 LINC00529 chr8 11247626 11267865 - lincRNA NOVEL OTTHUMG00000165427.2 20240 241 2 ENSG00000239315.4 RPL19P13 chr8 11256020 11256602 + processed_pseudogene KNOWN OTTHUMG00000158120.2 583 583 1 ENSG00000249316.2 CTC-493P15.2 chr8 11281364 11282501 - unprocessed_pseudogene KNOWN OTTHUMG00000160436.2 1138 564 2 ENSG00000280273.1 AF131216.1 chr8 11283500 11285068 - protein_coding KNOWN NA 1569 1569 1 ENSG00000104643.8 MTMR9 chr8 11284416 11328146 + protein_coding KNOWN OTTHUMG00000090647.3 43731 8804 33 ENSG00000246477.3 AF131216.6 chr8 11315859 11325429 - antisense NOVEL OTTHUMG00000165413.2 9571 5856 2 ENSG00000177710.5 SLC35G5 chr8 11330888 11332208 + protein_coding KNOWN OTTHUMG00000090653.2 1321 1321 1 ENSG00000154316.13 TDH chr8 11339637 11368452 + unitary_pseudogene KNOWN OTTHUMG00000165365.4 28816 1894 30 ENSG00000255020.1 AF131216.5 chr8 11345748 11347502 - antisense NOVEL OTTHUMG00000165414.1 1755 1099 2 ENSG00000174876.15 AMY1B chr1 103687415 103696680 - protein_coding KNOWN OTTHUMG00000011021.1 9266 2334 34 ENSG00000184608.7 FAM167A-AS1 chr8 11368402 11438658 + processed_transcript KNOWN OTTHUMG00000165366.3 70257 1909 18 ENSG00000242483.3 RN7SL293P chr8 11379395 11379675 + misc_RNA KNOWN NA 281 281 1 ENSG00000199368.1 RNU6-1084P chr8 11392411 11392517 - snRNA KNOWN NA 107 107 1 ENSG00000154319.13 FAM167A chr8 11421463 11474715 - protein_coding KNOWN OTTHUMG00000129361.3 53253 5033 20 ENSG00000136573.11 BLK chr8 11494001 11564604 + protein_coding KNOWN OTTHUMG00000090729.2 70604 4803 37 ENSG00000269954.1 RP11-148O21.6 chr8 11552488 11552991 - lincRNA NOVEL OTTHUMG00000183971.1 504 504 1 ENSG00000254774.1 RP11-148O21.3 chr8 11553224 11554207 - antisense NOVEL OTTHUMG00000165415.1 984 435 2 ENSG00000255518.1 RP11-148O21.4 chr8 11556251 11558022 - antisense NOVEL OTTHUMG00000166627.1 1772 544 2 ENSG00000255354.1 RP11-148O21.2 chr8 11558466 11560020 - antisense NOVEL OTTHUMG00000165416.1 1555 594 3 ENSG00000170983.3 LINC00208 chr8 11576313 11581342 + lincRNA KNOWN OTTHUMG00000161738.2 5030 2150 3 ENSG00000227408.1 AMYP1 chr1 103713723 103719871 + unprocessed_pseudogene KNOWN OTTHUMG00000011044.1 6149 1023 7 ENSG00000136574.16 GATA4 chr8 11676959 11760002 + protein_coding KNOWN OTTHUMG00000090800.3 83044 4443 45 ENSG00000255394.4 C8orf49 chr8 11761256 11763223 + lincRNA KNOWN OTTHUMG00000165224.3 1968 1968 2 ENSG00000154328.14 NEIL2 chr8 11769639 11787346 + protein_coding KNOWN OTTHUMG00000090753.5 17708 3367 31 ENSG00000227203.3 SUB1P1 chr8 11790005 11790386 + processed_pseudogene KNOWN OTTHUMG00000165367.1 382 382 1 ENSG00000079459.11 FDFT1 chr8 11795573 11839309 + protein_coding KNOWN OTTHUMG00000090801.4 43737 5202 158 ENSG00000255046.1 RP11-297N6.4 chr8 11797928 11802568 - lincRNA NOVEL OTTHUMG00000165417.1 4641 1091 4 ENSG00000164733.19 CTSB chr8 11842524 11869448 - protein_coding KNOWN OTTHUMG00000090799.8 26925 7428 203 ENSG00000269899.1 RP11-589N15.2 chr8 11846154 11846391 - sense_intronic NOVEL OTTHUMG00000183972.1 238 238 1 ENSG00000255144.1 RP11-589N15.1 chr8 11895850 11896870 - unprocessed_pseudogene KNOWN OTTHUMG00000165307.2 1021 377 2 ENSG00000254948.1 OR7E158P chr8 11919900 11920809 - unprocessed_pseudogene KNOWN OTTHUMG00000165308.1 910 910 1 ENSG00000187733.6 AMY1C chr1 103750406 103758690 + protein_coding KNOWN OTTHUMG00000011045.1 8285 1632 10 ENSG00000206014.6 OR7E161P chr8 11928597 11929563 - unprocessed_pseudogene KNOWN OTTHUMG00000165472.1 967 967 1 ENSG00000205884.2 DEFB136 chr8 11973937 11974599 - protein_coding KNOWN OTTHUMG00000158720.1 663 237 2 ENSG00000205883.2 DEFB135 chr8 11982321 11984590 + protein_coding KNOWN OTTHUMG00000158719.1 2270 234 2 ENSG00000205882.7 DEFB134 chr8 11993174 11996312 - protein_coding KNOWN OTTHUMG00000158718.4 3139 1068 4 ENSG00000255174.1 RP11-481A20.4 chr8 11999087 11999468 + processed_pseudogene KNOWN OTTHUMG00000165311.1 382 382 1 ENSG00000254507.2 RP11-481A20.10 chr8 12003400 12004082 - transcribed_processed_pseudogene KNOWN OTTHUMG00000165312.3 683 683 2 ENSG00000255016.1 RP11-481A20.8 chr8 12025244 12025598 - processed_pseudogene KNOWN OTTHUMG00000165314.1 355 355 1 ENSG00000254817.1 OR7E160P chr8 12033646 12034612 - unprocessed_pseudogene KNOWN OTTHUMG00000165315.1 967 967 1 ENSG00000254700.1 RP11-1236K1.11 chr8 12043506 12043670 - processed_pseudogene KNOWN OTTHUMG00000165473.3 165 165 1 ENSG00000233050.1 DEFB130 chr8 12064389 12071747 - protein_coding KNOWN OTTHUMG00000158721.1 7359 240 2 ENSG00000162408.10 NOL9 chr1 6521347 6554535 - protein_coding KNOWN OTTHUMG00000000904.1 33189 7293 23 ENSG00000225191.1 RP11-97C18.1 chr1 103926567 103927806 + processed_pseudogene KNOWN OTTHUMG00000011046.1 1240 1240 1 ENSG00000252029.1 RNA5SP253 chr8 12087396 12087445 - rRNA KNOWN NA 50 50 1 ENSG00000255544.2 DEFB108P3 chr8 12095176 12099536 - unprocessed_pseudogene KNOWN OTTHUMG00000165316.2 4361 222 2 ENSG00000215343.6 ZNF705D chr8 12104389 12115516 + protein_coding KNOWN OTTHUMG00000165474.1 11128 3377 11 ENSG00000255052.4 FAM66D chr8 12115782 12177550 + antisense KNOWN OTTHUMG00000165269.4 61769 918 4 ENSG00000254923.1 RP11-1236K1.8 chr8 12128107 12129298 - processed_pseudogene KNOWN OTTHUMG00000165293.1 1192 1192 1 ENSG00000226430.5 USP17L7 chr8 12132417 12134444 - protein_coding KNOWN OTTHUMG00000165294.3 2028 2028 1 ENSG00000223443.2 USP17L2 chr8 12137168 12139077 - protein_coding KNOWN OTTHUMG00000165295.2 1910 1910 1 ENSG00000254866.2 DEFB109P3 chr8 12150895 12151134 - processed_pseudogene KNOWN OTTHUMG00000165296.3 240 240 1 ENSG00000205879.4 FAM90A2P chr8 12172202 12178575 - unprocessed_pseudogene KNOWN OTTHUMG00000165297.1 6374 2423 6 ENSG00000249889.1 ALG1L11P chr8 12178697 12182719 + unprocessed_pseudogene KNOWN OTTHUMG00000160503.3 4023 450 4 ENSG00000243500.1 RP11-364B6.2 chr1 104073010 104073537 + processed_pseudogene KNOWN OTTHUMG00000011048.1 528 528 1 ENSG00000266637.1 AC145124.1 chr8 12180689 12180754 + miRNA NOVEL NA 66 66 1 ENSG00000186523.13 FAM86B1 chr8 12182096 12194133 - protein_coding KNOWN OTTHUMG00000165298.5 12038 4232 101 ENSG00000255495.1 AC145124.2 chr8 12194467 12196280 + antisense NOVEL OTTHUMG00000165272.3 1814 1361 2 ENSG00000254527.1 ENPP7P12 chr8 12205759 12206389 - processed_pseudogene KNOWN OTTHUMG00000165299.1 631 631 1 ENSG00000237215.3 ABC12-47043100G14.2 chr8 12290071 12296180 - unprocessed_pseudogene KNOWN OTTHUMG00000165455.2 6110 184 2 ENSG00000232948.1 DEFB130 chr8 12310962 12318316 - protein_coding KNOWN OTTHUMG00000158742.1 7355 240 2 ENSG00000252535.1 RNA5SP254 chr8 12333644 12333693 - rRNA KNOWN NA 50 50 1 ENSG00000254623.1 DEFB108P4 chr8 12341426 12345776 - unprocessed_pseudogene KNOWN OTTHUMG00000165456.1 4351 240 2 ENSG00000215339.3 ZNF705C chr8 12356136 12359391 + unprocessed_pseudogene KNOWN OTTHUMG00000165457.1 3256 889 4 ENSG00000227888.4 FAM66A chr8 12362019 12388296 + lincRNA KNOWN OTTHUMG00000165458.2 26278 1222 8 ENSG00000215869.3 RP11-364B6.1 chr1 104073023 104077087 + lincRNA NOVEL OTTHUMG00000011047.1 4065 1225 2 ENSG00000254423.1 RP11-351I21.7 chr8 12374366 12375546 - processed_pseudogene KNOWN OTTHUMG00000165459.2 1181 1181 1 ENSG00000255556.2 RP11-351I21.6 chr8 12378679 12380265 - processed_pseudogene KNOWN OTTHUMG00000165460.2 1587 1587 1 ENSG00000242296.2 DEFB109P1 chr8 12393209 12400366 - unprocessed_pseudogene KNOWN OTTHUMG00000158671.3 7158 265 2 ENSG00000270074.1 RP11-351I21.11 chr8 12412827 12414373 + lincRNA NOVEL OTTHUMG00000183973.1 1547 1547 1 ENSG00000251402.3 FAM90A25P chr8 12415080 12418090 - unprocessed_pseudogene KNOWN OTTHUMG00000165461.2 3011 1395 4 ENSG00000250794.2 ALG1L12P chr8 12421032 12425000 + unprocessed_pseudogene KNOWN OTTHUMG00000160507.2 3969 434 4 ENSG00000145002.11 FAM86B2 chr8 12425614 12436343 - protein_coding KNOWN OTTHUMG00000165462.1 10730 1366 26 ENSG00000255549.2 ENPP7P6 chr8 12448013 12511278 - unprocessed_pseudogene KNOWN OTTHUMG00000165463.2 63266 929 3 ENSG00000270154.1 RP11-419I17.1 chr8 12476462 12477122 + lincRNA NOVEL OTTHUMG00000183974.1 661 661 1 ENSG00000242607.1 RPS3AP34 chr8 12570350 12571130 - processed_pseudogene KNOWN OTTHUMG00000158124.1 781 781 1 ENSG00000281297.1 AC092506.1 chr1 104153272 104153347 + miRNA NOVEL NA 76 76 1 ENSG00000238460.1 AC068587.2 chr8 12578005 12578152 + miRNA NOVEL NA 148 148 1 ENSG00000255122.1 RP11-303G3.6 chr8 12580287 12581063 + processed_pseudogene KNOWN OTTHUMG00000165464.1 777 186 2 ENSG00000244289.1 RPS3AP35 chr8 12628476 12629256 - processed_pseudogene KNOWN OTTHUMG00000158126.1 781 781 1 ENSG00000238323.1 AC068587.1 chr8 12636104 12636252 + miRNA NOVEL NA 149 149 1 ENSG00000255253.1 RP11-303G3.9 chr8 12638428 12638602 + processed_pseudogene KNOWN OTTHUMG00000165465.1 175 175 1 ENSG00000254581.1 RP11-303G3.10 chr8 12676035 12676389 - processed_pseudogene KNOWN OTTHUMG00000165466.1 355 355 1 ENSG00000177400.6 OR7E8P chr8 12684154 12685153 - unprocessed_pseudogene KNOWN OTTHUMG00000165467.1 1000 1000 1 ENSG00000254917.1 OR7E15P chr8 12696307 12697273 - unprocessed_pseudogene KNOWN OTTHUMG00000165468.1 967 967 1 ENSG00000254724.1 OR7E10P chr8 12703066 12704056 - unprocessed_pseudogene KNOWN OTTHUMG00000165469.1 991 991 1 ENSG00000264512.1 MIR5692A2 chr8 12719127 12719195 + miRNA KNOWN NA 69 69 1 ENSG00000228347.1 FTLP17 chr1 104153306 104153830 - processed_pseudogene KNOWN OTTHUMG00000011049.1 525 525 1 ENSG00000154359.11 LONRF1 chr8 12721894 12756073 - protein_coding KNOWN OTTHUMG00000165475.2 34180 5685 62 ENSG00000266206.1 MIR3926-2 chr8 12727232 12727304 - miRNA KNOWN NA 73 73 1 ENSG00000254813.4 RP11-252C15.1 chr8 12765849 12811478 - lincRNA NOVEL OTTHUMG00000165476.1 45630 1259 8 ENSG00000255494.1 LINC00681 chr8 12794243 12818291 + lincRNA NOVEL OTTHUMG00000129516.3 24049 504 2 ENSG00000264463.1 AC090133.1 chr8 12905838 12905921 + miRNA NOVEL NA 84 84 1 ENSG00000250305.7 KIAA1456 chr8 12945642 13031503 + protein_coding KNOWN OTTHUMG00000165477.3 85862 14668 33 ENSG00000251468.2 RP11-369K16.1 chr8 12958387 12962200 + unprocessed_pseudogene KNOWN OTTHUMG00000160399.2 3814 1418 3 ENSG00000206996.1 RNU6-842P chr8 13044350 13044456 + snRNA KNOWN NA 107 107 1 ENSG00000164741.13 DLC1 chr8 13083361 13515658 - protein_coding KNOWN OTTHUMG00000090825.6 432298 10988 107 ENSG00000200630.1 Y_RNA chr8 13160178 13160279 + misc_RNA NOVEL NA 102 102 1 ENSG00000225036.1 RP11-414B7.1 chr1 105433994 105434821 + processed_pseudogene KNOWN OTTHUMG00000011002.1 828 828 1 ENSG00000253932.1 RP11-10C8.2 chr8 13338574 13342754 + antisense NOVEL OTTHUMG00000163950.1 4181 3488 2 ENSG00000253257.1 MTND4P7 chr8 13353401 13353530 - processed_pseudogene KNOWN OTTHUMG00000163951.1 130 130 1 ENSG00000252179.1 RNA5SP255 chr8 13536029 13536135 + rRNA KNOWN NA 107 107 1 ENSG00000255069.1 RP11-145O15.3 chr8 13557657 13604610 - antisense NOVEL OTTHUMG00000165481.1 46954 1806 2 ENSG00000164743.4 C8orf48 chr8 13566843 13568287 + protein_coding KNOWN OTTHUMG00000165482.1 1445 1445 1 ENSG00000254491.1 RP11-145O15.2 chr8 13583889 13584533 - processed_pseudogene KNOWN OTTHUMG00000165483.1 645 645 1 ENSG00000255457.1 RP11-436P7.1 chr8 13695574 13705506 + processed_pseudogene KNOWN OTTHUMG00000165486.2 9933 270 2 ENSG00000255413.1 RP11-436P7.2 chr8 13741809 13742781 + processed_pseudogene KNOWN OTTHUMG00000165487.1 973 973 1 ENSG00000254753.1 RP11-480O10.1 chr8 13844101 13849109 - lincRNA NOVEL OTTHUMG00000165488.1 5009 589 2 ENSG00000254425.1 RP11-480O10.2 chr8 13909231 13909780 - processed_pseudogene KNOWN OTTHUMG00000165489.1 550 550 1 ENSG00000230768.6 RP11-251P6.1 chr1 105587575 105618958 - lincRNA NOVEL OTTHUMG00000011003.4 31384 2997 58 ENSG00000255437.1 RP11-510I21.1 chr8 14022687 14023422 - processed_pseudogene KNOWN OTTHUMG00000165490.1 736 736 1 ENSG00000185053.11 SGCZ chr8 14089864 15238339 - protein_coding KNOWN OTTHUMG00000090827.3 1148476 2249 20 ENSG00000254575.1 RP11-3G21.1 chr8 14161297 14165359 + antisense NOVEL OTTHUMG00000165500.1 4063 488 3 ENSG00000214366.4 EIF4EP5 chr8 14309033 14309672 + processed_pseudogene KNOWN OTTHUMG00000165492.1 640 640 1 ENSG00000252264.1 RNU7-153P chr8 14319455 14319516 + snRNA KNOWN NA 62 62 1 ENSG00000206950.1 Y_RNA chr8 14332555 14332663 + misc_RNA NOVEL NA 109 109 1 ENSG00000252035.1 RNU6-397P chr8 14487776 14487879 - snRNA KNOWN NA 104 104 1 ENSG00000263415.1 AC021760.1 chr8 14514741 14514865 + miRNA NOVEL NA 125 125 1 ENSG00000255365.1 RP11-776K3.1 chr8 14690382 14690619 + processed_pseudogene KNOWN OTTHUMG00000165501.1 238 238 1 ENSG00000199127.1 MIR383 chr8 14853438 14853510 - miRNA KNOWN NA 73 73 1 ENSG00000227850.1 SEPT2P1 chr1 105698039 105698218 + processed_pseudogene KNOWN OTTHUMG00000011007.1 180 180 1 ENSG00000255076.2 CTD-2023J5.1 chr8 14879057 14879819 - sense_intronic NOVEL OTTHUMG00000165502.2 763 312 2 ENSG00000249368.1 RP11-782K4.1 chr8 15325296 15325569 + processed_pseudogene KNOWN OTTHUMG00000161547.1 274 274 1 ENSG00000104723.19 TUSC3 chr8 15417215 15766649 + protein_coding KNOWN OTTHUMG00000094803.3 349435 5190 88 ENSG00000223214.1 AC091559.1 chr8 15521884 15521966 + miRNA NOVEL NA 83 83 1 ENSG00000248423.1 RP11-235P11.1 chr8 15688914 15689562 - processed_pseudogene KNOWN OTTHUMG00000161572.1 649 649 1 ENSG00000250483.1 PPM1AP1 chr8 15806149 15807283 - processed_pseudogene KNOWN OTTHUMG00000161571.1 1135 1135 1 ENSG00000226836.5 RP11-77B22.1 chr8 15943127 15943532 + processed_pseudogene KNOWN OTTHUMG00000158128.1 406 406 1 ENSG00000253648.1 RP11-77B22.2 chr8 15973315 16000324 + lincRNA NOVEL OTTHUMG00000163854.1 27010 389 3 ENSG00000038945.13 MSR1 chr8 16107878 16567490 - protein_coding KNOWN OTTHUMG00000094809.4 459613 7812 87 ENSG00000253951.1 RP11-447G11.1 chr8 16275681 16276296 + processed_pseudogene KNOWN OTTHUMG00000163855.1 616 616 1 ENSG00000237897.2 RP11-90H3.2 chr1 105890693 105891430 - processed_pseudogene KNOWN OTTHUMG00000011005.1 738 593 2 ENSG00000253934.2 MRPL49P2 chr8 16374618 16375082 + processed_pseudogene KNOWN OTTHUMG00000163856.2 465 465 1 ENSG00000253184.1 RP11-13N12.2 chr8 16604255 16664879 + lincRNA NOVEL OTTHUMG00000163857.1 60625 458 3 ENSG00000253496.2 RP11-13N12.1 chr8 16676905 16915044 - lincRNA NOVEL OTTHUMG00000163858.3 238140 813 6 ENSG00000264092.2 RN7SL474P chr8 16863196 16863496 - misc_RNA KNOWN NA 301 301 1 ENSG00000078579.8 FGF20 chr8 16992169 17002181 - protein_coding KNOWN OTTHUMG00000096964.2 10013 1688 5 ENSG00000155970.10 MICU3 chr8 17027238 17122644 + protein_coding KNOWN OTTHUMG00000096965.2 95407 4606 45 ENSG00000249258.2 RP11-468H14.2 chr8 17131181 17149789 + lincRNA NOVEL OTTHUMG00000163859.1 18609 2292 3 ENSG00000244113.1 RP11-468H14.1 chr8 17150301 17150888 - processed_pseudogene KNOWN OTTHUMG00000158129.1 588 588 1 ENSG00000104219.11 ZDHHC2 chr8 17156029 17224799 + protein_coding KNOWN OTTHUMG00000163860.2 68771 6735 24 ENSG00000198791.10 CNOT7 chr8 17224964 17246878 - protein_coding KNOWN OTTHUMG00000096971.3 21915 10943 51 ENSG00000232952.1 RP11-90H3.1 chr1 105891739 105893517 + processed_pseudogene KNOWN OTTHUMG00000011004.1 1779 1779 1 ENSG00000155975.8 VPS37A chr8 17246571 17302427 + protein_coding KNOWN OTTHUMG00000130785.4 55857 6784 70 ENSG00000003987.12 MTMR7 chr8 17298030 17413528 - protein_coding KNOWN OTTHUMG00000163771.3 115499 5692 58 ENSG00000264599.2 AC124074.1 chr8 17303945 17304035 + miRNA NOVEL NA 91 91 1 ENSG00000214607.2 ADAM24P chr8 17469518 17471618 + unitary_pseudogene KNOWN OTTHUMG00000154893.2 2101 2101 1 ENSG00000003989.15 SLC7A2 chr8 17497088 17570573 + protein_coding KNOWN OTTHUMG00000130819.4 73486 7905 63 ENSG00000279271.1 RP11-349F21.3 chr8 17498647 17499238 - TEC KNOWN OTTHUMG00000189198.1 592 592 1 ENSG00000280453.1 RP11-349F21.4 chr8 17498737 17499157 + TEC KNOWN OTTHUMG00000189203.1 421 421 1 ENSG00000279903.1 RP11-349F21.5 chr8 17500012 17500605 + TEC KNOWN OTTHUMG00000189204.1 594 594 1 ENSG00000279932.1 RP11-349F21.2 chr8 17510613 17511300 + sense_intronic NOVEL OTTHUMG00000189199.1 688 688 1 ENSG00000104213.11 PDGFRL chr8 17576433 17644071 + protein_coding KNOWN OTTHUMG00000130818.4 67639 2409 16 ENSG00000253022.1 RNU6-731P chr1 6540854 6540964 + snRNA KNOWN NA 111 111 1 ENSG00000233047.4 RP11-24P14.1 chr1 105927624 106023212 - lincRNA NOVEL OTTHUMG00000011006.2 95589 1040 11 ENSG00000277466.1 RP11-349F21.1 chr8 17596312 17596378 - unprocessed_pseudogene KNOWN OTTHUMG00000187697.1 67 67 1 ENSG00000129422.12 MTUS1 chr8 17643795 17800917 - protein_coding KNOWN OTTHUMG00000163756.3 157123 12010 182 ENSG00000265520.1 MIR548V chr8 17681578 17681657 - miRNA KNOWN NA 80 80 1 ENSG00000253168.1 RP11-326L2.1 chr8 17703988 17706187 + antisense NOVEL OTTHUMG00000163704.1 2200 735 2 ENSG00000212280.1 RNA5SP256 chr8 17748118 17748230 + rRNA KNOWN NA 113 113 1 ENSG00000253944.1 RP11-156K13.1 chr8 17801345 17861069 + antisense NOVEL OTTHUMG00000163705.1 59725 510 2 ENSG00000253671.1 RP11-806O11.1 chr8 17808941 17820868 + processed_transcript NOVEL OTTHUMG00000163706.1 11928 1053 5 ENSG00000104760.15 FGL1 chr8 17864380 17910365 - protein_coding KNOWN OTTHUMG00000096989.4 45986 3301 74 ENSG00000253215.1 RP11-156K13.2 chr8 17882043 17882661 + antisense NOVEL OTTHUMG00000163791.1 619 529 2 ENSG00000254054.2 RP11-156K13.3 chr8 17905756 17907887 + lincRNA NOVEL OTTHUMG00000163792.1 2132 634 3 ENSG00000237480.1 RP5-947P14.1 chr1 106073247 106084499 + lincRNA NOVEL OTTHUMG00000011035.1 11253 621 5 ENSG00000078674.16 PCM1 chr8 17922840 18029944 + protein_coding KNOWN OTTHUMG00000163699.6 107105 14445 249 ENSG00000104763.16 ASAH1 chr8 18056425 18084985 - protein_coding KNOWN OTTHUMG00000096997.6 28561 5051 96 ENSG00000245281.5 CTD-2547L16.1 chr8 18084868 18096394 + antisense NOVEL OTTHUMG00000163728.1 11527 1834 20 ENSG00000253384.1 CTD-2547L16.3 chr8 18088569 18089687 - processed_pseudogene KNOWN OTTHUMG00000163818.1 1119 1119 1 ENSG00000171428.12 NAT1 chr8 18170477 18223689 + protein_coding KNOWN OTTHUMG00000097001.5 53213 3168 35 ENSG00000254015.1 CTD-2547L16.2 chr8 18200924 18201205 - processed_pseudogene KNOWN OTTHUMG00000163793.1 282 282 1 ENSG00000253937.1 NATP chr8 18370607 18371484 + unprocessed_pseudogene KNOWN OTTHUMG00000163710.1 878 878 1 ENSG00000244593.1 RP11-685B14.1 chr8 18383274 18383917 - processed_pseudogene KNOWN OTTHUMG00000158573.1 644 644 1 ENSG00000271654.1 RP11-685B14.3 chr8 18387108 18387777 - processed_pseudogene KNOWN OTTHUMG00000184844.1 670 670 1 ENSG00000156006.4 NAT2 chr8 18391245 18401218 + protein_coding KNOWN OTTHUMG00000130826.2 9974 1322 4 ENSG00000230932.2 RP5-947P14.2 chr1 106080801 106081379 - processed_pseudogene KNOWN OTTHUMG00000011034.2 579 579 1 ENSG00000156011.15 PSD3 chr8 18527301 19084730 - protein_coding KNOWN OTTHUMG00000163711.1 557430 15213 145 ENSG00000274368.1 AC100800.2 chr8 18582843 18582943 - miRNA NOVEL NA 101 101 1 ENSG00000238787.2 AC100800.1 chr8 18664693 18664764 - miRNA NOVEL NA 72 72 1 ENSG00000187229.3 RP11-161I2.1 chr8 18720905 18734405 + antisense NOVEL OTTHUMG00000163712.1 13501 2054 3 ENSG00000244018.1 RPL35P6 chr8 18774547 18774918 - processed_pseudogene KNOWN OTTHUMG00000158575.1 372 372 1 ENSG00000251963.1 AC090420.1 chr8 18809500 18809626 - miRNA NOVEL NA 127 127 1 ENSG00000278886.1 RP11-108A14.1 chr8 18864681 18865247 - TEC KNOWN OTTHUMG00000163713.1 567 567 1 ENSG00000201157.1 SNORA62 chr8 18979619 18979772 + snoRNA NOVEL NA 154 154 1 ENSG00000253335.1 RP11-420B22.1 chr8 18989279 19000952 + antisense NOVEL OTTHUMG00000163714.1 11674 545 3 ENSG00000270255.1 RP11-420B22.2 chr8 19001627 19001950 + processed_pseudogene KNOWN OTTHUMG00000184797.1 324 324 1 ENSG00000270342.1 RP11-478L17.1 chr1 106544342 106544744 - processed_pseudogene KNOWN OTTHUMG00000184314.1 403 403 1 ENSG00000253557.4 RP11-1080G15.1 chr8 19084992 19259469 - lincRNA NOVEL OTTHUMG00000163715.1 174478 1460 13 ENSG00000254242.1 RP11-1080G15.2 chr8 19091733 19115024 + lincRNA NOVEL OTTHUMG00000163716.1 23292 519 3 ENSG00000250316.1 RP11-618M23.1 chr8 19237737 19241912 + unprocessed_pseudogene KNOWN OTTHUMG00000160400.2 4176 2297 5 ENSG00000254201.1 RP11-618M23.2 chr8 19246350 19249240 + lincRNA NOVEL OTTHUMG00000163717.1 2891 179 2 ENSG00000253280.1 RP11-618M23.4 chr8 19254241 19257334 - lincRNA NOVEL OTTHUMG00000163718.1 3094 362 4 ENSG00000279919.1 RP11-618M23.3 chr8 19277284 19277573 + TEC KNOWN OTTHUMG00000163719.1 290 290 1 ENSG00000104611.10 SH2D4A chr8 19313617 19396218 + protein_coding KNOWN OTTHUMG00000097005.2 82602 4148 37 ENSG00000279858.1 RP11-618M23.5 chr8 19375128 19375622 - TEC KNOWN OTTHUMG00000163720.1 495 495 1 ENSG00000147408.13 CSGALNACT1 chr8 19404161 19758029 - protein_coding KNOWN OTTHUMG00000130827.3 353869 6580 81 ENSG00000253270.1 RP11-1105O14.1 chr8 19678572 19688934 + lincRNA NOVEL OTTHUMG00000163754.1 10363 467 2 ENSG00000270976.1 RP11-110F24.1 chr1 106780223 106780435 + processed_pseudogene KNOWN OTTHUMG00000184318.1 213 213 1 ENSG00000104613.10 INTS10 chr8 19817140 19852083 + protein_coding KNOWN OTTHUMG00000131065.3 34944 6869 84 ENSG00000175445.13 LPL chr8 19901717 19967258 + protein_coding KNOWN OTTHUMG00000036645.6 65542 4382 31 ENSG00000253775.1 AC100802.3 chr8 20079305 20118442 + antisense NOVEL OTTHUMG00000163744.1 39138 1026 2 ENSG00000242709.1 RPL30P9 chr8 20113343 20113672 - processed_pseudogene KNOWN OTTHUMG00000158581.1 330 330 1 ENSG00000036565.13 SLC18A1 chr8 20144855 20183206 - protein_coding KNOWN OTTHUMG00000097017.3 38352 3910 128 ENSG00000147416.9 ATP6V1B2 chr8 20197367 20226819 + protein_coding KNOWN OTTHUMG00000131073.2 29453 7816 48 ENSG00000222267.1 RNU6-892P chr8 20229779 20229877 + snRNA KNOWN NA 99 99 1 ENSG00000061337.14 LZTS1 chr8 20246165 20303963 - protein_coding KNOWN OTTHUMG00000097027.3 57799 5706 13 ENSG00000253733.3 LZTS1-AS1 chr8 20275773 20290458 + lincRNA NOVEL OTTHUMG00000163745.1 14686 892 3 ENSG00000274467.1 5S_rRNA chr8 20290174 20290289 + rRNA NOVEL NA 116 116 1 ENSG00000233449.1 RP11-233E12.4 chr1 106802755 106803427 - processed_pseudogene KNOWN OTTHUMG00000010957.1 673 673 1 ENSG00000253164.4 RP11-563N12.2 chr8 20350210 20372769 + lincRNA NOVEL OTTHUMG00000163746.1 22560 983 9 ENSG00000253178.1 RP11-404E12.1 chr8 20551201 20551405 + unprocessed_pseudogene KNOWN OTTHUMG00000163747.1 205 205 1 ENSG00000253300.1 RP11-108E14.1 chr8 20655691 20700134 - lincRNA NOVEL OTTHUMG00000163748.1 44444 1153 4 ENSG00000253866.1 TMEM97P2 chr8 20934435 20934837 - processed_pseudogene KNOWN OTTHUMG00000163890.1 403 403 1 ENSG00000254260.1 RP11-369E15.1 chr8 20941428 20950175 + lincRNA NOVEL OTTHUMG00000163757.1 8748 568 4 ENSG00000254092.1 RP11-369E15.3 chr8 20952645 20973877 - lincRNA NOVEL OTTHUMG00000163758.1 21233 417 2 ENSG00000253147.4 RP11-369E15.4 chr8 20953127 20968904 + lincRNA NOVEL OTTHUMG00000163759.1 15778 1050 9 ENSG00000254026.1 RP11-369E15.2 chr8 20954012 20968904 + lincRNA NOVEL OTTHUMG00000163760.1 14893 550 4 ENSG00000253199.1 RP11-421P23.1 chr8 20973797 20995119 + lincRNA NOVEL OTTHUMG00000163761.1 21323 2059 7 ENSG00000254040.1 RP11-421P23.2 chr8 21023296 21029058 + lincRNA NOVEL OTTHUMG00000163891.1 5763 581 4 ENSG00000232551.2 RP11-233E12.2 chr1 106804474 106806032 - processed_pseudogene KNOWN OTTHUMG00000010955.3 1559 1559 1 ENSG00000280215.1 RP11-279N21.1 chr8 21129990 21130100 - TEC KNOWN OTTHUMG00000163892.1 111 111 1 ENSG00000215945.2 AC021613.1 chr8 21156131 21156233 + miRNA NOVEL NA 103 103 1 ENSG00000254334.1 RP11-24P4.1 chr8 21298206 21309449 + lincRNA NOVEL OTTHUMG00000163893.2 11244 1882 5 ENSG00000266713.1 AC009695.1 chr8 21494028 21494116 + miRNA NOVEL NA 89 89 1 ENSG00000266630.1 AC022716.1 chr8 21549998 21550084 + miRNA NOVEL NA 87 87 1 ENSG00000168546.9 GFRA2 chr8 21690403 21812357 - protein_coding KNOWN OTTHUMG00000163897.5 121955 5716 56 ENSG00000273484.1 OR6R2P chr8 21797460 21797759 + unprocessed_pseudogene KNOWN OTTHUMG00000185882.1 300 300 1 ENSG00000147443.11 DOK2 chr8 21908873 21913860 - protein_coding KNOWN OTTHUMG00000131075.3 4988 2211 22 ENSG00000130227.15 XPO7 chr8 21919671 22006585 + protein_coding KNOWN OTTHUMG00000163789.4 86915 6909 85 ENSG00000158806.12 NPM2 chr8 22024125 22036897 + protein_coding KNOWN OTTHUMG00000131129.3 12773 2063 90 ENSG00000237460.2 RP11-233E12.1 chr1 106818239 106838167 + lincRNA NOVEL OTTHUMG00000000497.2 19929 708 3 ENSG00000158815.9 FGF17 chr8 22042398 22048809 + protein_coding KNOWN OTTHUMG00000097051.2 6412 3287 16 ENSG00000158856.16 DMTN chr8 22048995 22082527 + protein_coding KNOWN OTTHUMG00000097087.5 33533 4473 236 ENSG00000158863.20 FAM160B2 chr8 22089159 22104898 + protein_coding KNOWN OTTHUMG00000097088.8 15740 8278 66 ENSG00000275074.1 NUDT18 chr8 22106872 22109419 - protein_coding KNOWN OTTHUMG00000163774.5 2548 1756 5 ENSG00000168453.13 HR chr8 22114415 22133384 - protein_coding KNOWN OTTHUMG00000097089.4 18970 8784 59 ENSG00000168476.10 REEP4 chr8 22138020 22141951 - protein_coding KNOWN OTTHUMG00000131491.4 3932 2266 40 ENSG00000168481.7 LGI3 chr8 22146825 22157084 - protein_coding KNOWN OTTHUMG00000131599.3 10260 4514 34 ENSG00000168484.11 SFTPC chr8 22156913 22164479 + protein_coding KNOWN OTTHUMG00000163775.1 7567 3188 46 ENSG00000168487.16 BMP1 chr8 22164736 22212326 + protein_coding KNOWN OTTHUMG00000097761.6 47591 7471 215 ENSG00000177725.5 CTD-2530N21.5 chr8 22169338 22171710 + sense_overlapping NOVEL OTTHUMG00000186797.1 2373 2373 7 ENSG00000198890.7 PRMT6 chr1 107056679 107059294 + protein_coding KNOWN OTTHUMG00000010964.1 2616 2616 1 ENSG00000168490.12 PHYHIP chr8 22219704 22232341 - protein_coding KNOWN OTTHUMG00000163776.2 12638 4170 21 ENSG00000208037.1 MIR320A chr8 22244962 22245043 - miRNA KNOWN NA 82 82 1 ENSG00000168495.11 POLR3D chr8 22245104 22254600 + protein_coding KNOWN OTTHUMG00000163778.3 9497 5611 35 ENSG00000254064.1 CTD-2530N21.4 chr8 22254576 22275162 - antisense NOVEL OTTHUMG00000164269.1 20587 515 2 ENSG00000197181.10 PIWIL2 chr8 22275297 22357563 + protein_coding KNOWN OTTHUMG00000097767.2 82267 5751 92 ENSG00000104635.12 SLC39A14 chr8 22367249 22434129 + protein_coding KNOWN OTTHUMG00000097791.4 66881 6942 59 ENSG00000241026.1 CTD-2036J7.1 chr8 22389865 22390655 - unprocessed_pseudogene KNOWN OTTHUMG00000158582.1 791 483 2 ENSG00000201761.1 RNU6-336P chr8 22434391 22434497 + snRNA KNOWN NA 107 107 1 ENSG00000120910.13 PPP3CC chr8 22440819 22541142 + protein_coding KNOWN OTTHUMG00000163802.3 100324 2899 69 ENSG00000254272.1 RP11-382J24.2 chr8 22492631 22493044 + processed_pseudogene KNOWN OTTHUMG00000163803.1 414 414 1 ENSG00000162631.17 NTNG1 chr1 107140007 107483458 + protein_coding KNOWN OTTHUMG00000010965.3 343452 9138 64 ENSG00000251034.1 RP11-582J16.4 chr8 22540845 22545405 - antisense NOVEL OTTHUMG00000163841.2 4561 4076 2 ENSG00000120896.12 SORBS3 chr8 22544986 22575788 + protein_coding KNOWN OTTHUMG00000131728.6 30803 6097 153 ENSG00000254230.1 RP11-582J16.3 chr8 22565997 22567171 - antisense NOVEL OTTHUMG00000163842.1 1175 585 2 ENSG00000120913.22 PDLIM2 chr8 22578279 22598025 + protein_coding KNOWN OTTHUMG00000164270.4 19747 12388 140 ENSG00000248235.5 AC037459.4 chr8 22589274 22602084 + protein_coding KNOWN OTTHUMG00000131729.11 12811 1198 14 ENSG00000241852.8 C8orf58 chr8 22599601 22604150 + protein_coding KNOWN OTTHUMG00000154160.5 4550 3317 34 ENSG00000158941.15 CCAR2 chr8 22604632 22621514 + protein_coding KNOWN OTTHUMG00000162249.2 16883 6534 125 ENSG00000253200.1 RP11-582J16.5 chr8 22613908 22616657 - antisense NOVEL OTTHUMG00000163843.2 2750 2750 1 ENSG00000147439.10 BIN3 chr8 22620418 22669148 - protein_coding KNOWN OTTHUMG00000163844.1 48731 5072 68 ENSG00000261026.1 CTD-3247F14.2 chr8 22679013 22684009 - sense_overlapping NOVEL OTTHUMG00000173366.1 4997 4997 1 ENSG00000229519.2 RP11-58A11.2 chr1 6547905 6548619 + processed_pseudogene KNOWN OTTHUMG00000001442.3 715 401 2 ENSG00000224550.1 RP11-270C12.3 chr1 107505203 107505448 + processed_pseudogene KNOWN OTTHUMG00000011031.1 246 246 1 ENSG00000179388.8 EGR3 chr8 22687659 22693302 - protein_coding KNOWN OTTHUMG00000097825.2 5644 4855 11 ENSG00000253125.1 RP11-459E5.1 chr8 22690150 22798616 + processed_transcript NOVEL OTTHUMG00000163751.1 108467 2191 11 ENSG00000134020.7 PEBP4 chr8 22713251 23000000 - protein_coding KNOWN OTTHUMG00000163749.4 286750 1329 14 ENSG00000248738.5 RP11-87E22.2 chr8 22877972 22888022 + antisense NOVEL OTTHUMG00000163752.1 10051 4023 11 ENSG00000253142.1 RP11-87E22.1 chr8 22895434 22897813 - sense_intronic NOVEL OTTHUMG00000163750.1 2380 898 2 ENSG00000240116.3 RN7SL303P chr8 22977877 22978127 + misc_RNA KNOWN NA 251 251 1 ENSG00000245025.2 RP11-875O11.1 chr8 22984596 23019335 - antisense NOVEL OTTHUMG00000163755.1 34740 2268 4 ENSG00000008853.15 RHOBTB2 chr8 22987417 23020199 + protein_coding KNOWN OTTHUMG00000097827.3 32783 6580 49 ENSG00000120889.11 TNFRSF10B chr8 23020133 23069179 - protein_coding KNOWN OTTHUMG00000097826.2 49047 5158 45 ENSG00000246130.1 RP11-875O11.2 chr8 23068229 23083619 + antisense NOVEL OTTHUMG00000163763.1 15391 2636 3 ENSG00000134215.14 VAV3 chr1 107571160 107965144 - protein_coding KNOWN OTTHUMG00000010995.3 393985 7271 194 ENSG00000253616.4 RP11-875O11.3 chr8 23071377 23074488 - antisense NOVEL OTTHUMG00000163772.1 3112 881 4 ENSG00000173535.12 TNFRSF10C chr8 23084355 23117437 + protein_coding KNOWN OTTHUMG00000097844.4 33083 2625 22 ENSG00000173530.5 TNFRSF10D chr8 23135588 23164030 - protein_coding KNOWN OTTHUMG00000097845.1 28443 3538 9 ENSG00000253930.1 RP11-1149O23.2 chr8 23189279 23190675 + antisense NOVEL OTTHUMG00000163783.1 1397 637 2 ENSG00000104689.8 TNFRSF10A chr8 23190452 23225126 - protein_coding KNOWN OTTHUMG00000097843.2 34675 2951 28 ENSG00000243265.1 RP11-1149O23.1 chr8 23206918 23207369 + processed_pseudogene KNOWN OTTHUMG00000158583.2 452 452 1 ENSG00000246582.2 RP11-1149O23.3 chr8 23224471 23230926 + processed_transcript NOVEL OTTHUMG00000163784.1 6456 2445 7 ENSG00000250714.3 RP11-1149O23.4 chr8 23225233 23230915 - antisense NOVEL OTTHUMG00000163785.1 5683 1125 2 ENSG00000147457.12 CHMP7 chr8 23243637 23262000 + protein_coding KNOWN OTTHUMG00000131785.4 18364 4698 64 ENSG00000104679.9 R3HCC1 chr8 23270120 23296279 + protein_coding KNOWN OTTHUMG00000163786.2 26160 2630 66 ENSG00000275455.1 MIR7852 chr1 107897223 107897304 + miRNA KNOWN NA 82 82 1 ENSG00000134013.14 LOXL2 chr8 23297189 23425328 - protein_coding KNOWN OTTHUMG00000163797.3 128140 5707 58 ENSG00000253837.1 RP11-177H13.2 chr8 23336171 23366125 + processed_transcript NOVEL OTTHUMG00000163787.1 29955 4798 5 ENSG00000197217.11 ENTPD4 chr8 23385783 23457695 - protein_coding KNOWN OTTHUMG00000097852.3 71913 7064 76 ENSG00000253390.1 CTC-756D1.2 chr8 23458601 23484971 + lincRNA NOVEL OTTHUMG00000163862.1 26371 630 2 ENSG00000253483.1 CTC-756D1.1 chr8 23483016 23483534 - processed_pseudogene KNOWN OTTHUMG00000163863.1 519 519 1 ENSG00000253986.1 CTC-756D1.3 chr8 23493009 23494198 - lincRNA NOVEL OTTHUMG00000163864.1 1190 715 2 ENSG00000147454.12 SLC25A37 chr8 23528805 23575463 + protein_coding KNOWN OTTHUMG00000163865.1 46659 8147 38 ENSG00000252067.1 RNU4-71P chr8 23600026 23600138 - snRNA KNOWN NA 113 113 1 ENSG00000253488.1 FAM60DP chr8 23634876 23635507 - processed_pseudogene KNOWN OTTHUMG00000163866.1 632 632 1 ENSG00000167034.9 NKX3-1 chr8 23678693 23682927 - protein_coding KNOWN OTTHUMG00000097851.3 4235 3271 5 ENSG00000230489.1 VAV3-AS1 chr1 107964443 107994607 + antisense NOVEL OTTHUMG00000010994.1 30165 619 3 ENSG00000180053.7 NKX2-6 chr8 23702451 23706598 - protein_coding KNOWN OTTHUMG00000163867.4 4148 906 2 ENSG00000253471.1 RP11-175E9.1 chr8 23707141 23789487 + lincRNA NOVEL OTTHUMG00000163868.1 82347 252 3 ENSG00000254002.1 RP11-213G6.2 chr8 23726331 23743042 - lincRNA NOVEL OTTHUMG00000163869.1 16712 443 3 ENSG00000216123.1 AC012119.1 chr8 23768556 23768645 - miRNA NOVEL NA 90 90 1 ENSG00000271118.1 RP11-175E9.2 chr8 23805933 23806154 - processed_pseudogene KNOWN OTTHUMG00000184840.1 222 222 1 ENSG00000207027.1 SNORA67 chr8 23806229 23806377 - snoRNA NOVEL NA 149 149 1 ENSG00000159167.10 STC1 chr8 23841915 23854807 - protein_coding KNOWN OTTHUMG00000097853.2 12893 4149 8 ENSG00000207201.1 RNU1-148P chr8 24076997 24077158 - snRNA KNOWN NA 162 162 1 ENSG00000253891.1 RP11-203E8.1 chr8 24169957 24177080 - lincRNA NOVEL OTTHUMG00000163779.1 7124 491 3 ENSG00000042980.11 ADAM28 chr8 24294040 24359018 + protein_coding KNOWN OTTHUMG00000163780.7 64979 9351 106 ENSG00000264753.1 AL390036.1 chr1 108018653 108018771 - miRNA NOVEL NA 119 119 1 ENSG00000253535.4 RP11-624C23.1 chr8 24295814 24912073 - antisense NOVEL OTTHUMG00000163790.3 616260 1341 16 ENSG00000134028.13 ADAMDEC1 chr8 24384285 24406013 + protein_coding KNOWN OTTHUMG00000097858.3 21729 2438 44 ENSG00000069206.14 ADAM7 chr8 24440930 24526970 + protein_coding KNOWN OTTHUMG00000097859.4 86041 4483 66 ENSG00000253643.4 RP11-561E1.1 chr8 24490312 24514829 - antisense NOVEL OTTHUMG00000163819.1 24518 1240 12 ENSG00000277760.1 AF106564.1 chr8 24811213 24811298 + miRNA NOVEL NA 86 86 1 ENSG00000272163.1 GS1-72M22.1 chr8 24912165 24914717 - antisense NOVEL OTTHUMG00000185424.2 2553 2553 1 ENSG00000104722.12 NEFM chr8 24913012 24919098 + protein_coding KNOWN OTTHUMG00000131990.7 6087 4381 21 ENSG00000277586.1 NEFL chr8 24950955 24957110 - protein_coding KNOWN OTTHUMG00000134284.9 6156 4329 11 ENSG00000272157.1 CTD-2168K21.2 chr8 24956621 24957110 + antisense NOVEL OTTHUMG00000185425.1 490 490 1 ENSG00000253832.1 CTD-2168K21.1 chr8 24992002 25009777 + lincRNA NOVEL OTTHUMG00000163846.1 17776 603 3 ENSG00000226822.1 RP11-356N1.2 chr1 108071482 108074519 + lincRNA NOVEL OTTHUMG00000011012.1 3038 610 5 ENSG00000253670.1 RP11-429O2.1 chr8 25141394 25141968 - processed_pseudogene KNOWN OTTHUMG00000163827.1 575 575 1 ENSG00000147459.16 DOCK5 chr8 25184723 25418082 + protein_coding KNOWN OTTHUMG00000131991.10 233360 15960 150 ENSG00000277665.1 AC091185.1 chr8 25282121 25282217 - miRNA NOVEL NA 97 97 1 ENSG00000274988.1 MIR6876 chr8 25345402 25345474 + miRNA KNOWN NA 73 73 1 ENSG00000147437.8 GNRH1 chr8 25419260 25424654 - protein_coding KNOWN OTTHUMG00000163852.1 5395 1762 7 ENSG00000253476.1 RP11-395I14.2 chr8 25425521 25426580 - lincRNA NOVEL OTTHUMG00000163853.1 1060 528 2 ENSG00000104756.14 KCTD9 chr8 25427847 25458476 - protein_coding KNOWN OTTHUMG00000099428.5 30630 4383 66 ENSG00000184661.12 CDCA2 chr8 25458997 25507920 + protein_coding KNOWN OTTHUMG00000099429.6 48924 3908 48 ENSG00000253100.1 RP11-219J21.1 chr8 25685798 25687524 + lincRNA NOVEL OTTHUMG00000163835.1 1727 1131 2 ENSG00000253342.1 RP11-219J21.2 chr8 25776679 25777456 + lincRNA NOVEL OTTHUMG00000163836.1 778 465 2 ENSG00000085491.14 SLC25A24 chr1 108134036 108200849 - protein_coding KNOWN OTTHUMG00000011013.5 66814 6548 30 ENSG00000254178.1 RP11-299D14.2 chr8 25834129 25840135 - lincRNA NOVEL OTTHUMG00000163837.1 6007 485 2 ENSG00000221818.7 EBF2 chr8 25841730 26045397 - protein_coding KNOWN OTTHUMG00000163838.2 203668 7077 46 ENSG00000199620.1 RNA5SP258 chr8 26136880 26136998 + rRNA KNOWN NA 119 119 1 ENSG00000249213.1 RP11-98P2.1 chr8 26254883 26256628 - processed_pseudogene KNOWN OTTHUMG00000160437.1 1746 1399 2 ENSG00000221914.7 PPP2R2A chr8 26291491 26372680 + protein_coding KNOWN OTTHUMG00000163850.11 81190 7881 130 ENSG00000228451.3 SDAD1P1 chr8 26379259 26382953 - transcribed_processed_pseudogene KNOWN OTTHUMG00000163945.1 3695 3174 4 ENSG00000104765.13 BNIP3L chr8 26382898 26505636 + protein_coding KNOWN OTTHUMG00000099433.3 122739 4307 45 ENSG00000253430.1 RP11-14I17.2 chr8 26422593 26423929 + sense_intronic NOVEL OTTHUMG00000164014.1 1337 508 2 ENSG00000251203.1 RP11-14I17.1 chr8 26433029 26434065 - processed_pseudogene KNOWN OTTHUMG00000160275.1 1037 669 2 ENSG00000254362.1 RP11-14I17.3 chr8 26440491 26442595 + sense_intronic NOVEL OTTHUMG00000164015.1 2105 568 4 ENSG00000260879.1 RP11-483I13.5 chr1 108199926 108201491 + antisense NOVEL OTTHUMG00000175898.1 1566 1566 1 ENSG00000240694.7 PNMA2 chr8 26504686 26514092 - protein_coding KNOWN OTTHUMG00000163816.4 9407 5579 25 ENSG00000092964.15 DPYSL2 chr8 26514275 26658178 + protein_coding KNOWN OTTHUMG00000099439.5 143904 7052 58 ENSG00000253208.1 RP11-1G11.2 chr8 26547669 26548463 + processed_pseudogene KNOWN OTTHUMG00000163884.1 795 795 1 ENSG00000120907.16 ADRA1A chr8 26748150 26867273 - protein_coding KNOWN OTTHUMG00000099459.2 119124 5848 30 ENSG00000240519.1 RP11-384C12.1 chr8 26771790 26772140 + processed_pseudogene KNOWN OTTHUMG00000158584.1 351 351 1 ENSG00000253813.1 COX6B1P4 chr8 26835817 26836300 - processed_pseudogene KNOWN OTTHUMG00000163885.1 484 484 1 ENSG00000275115.1 RP11-613H2.3 chr8 27010486 27010746 + unprocessed_pseudogene KNOWN OTTHUMG00000187700.1 261 261 1 ENSG00000215288.4 RP11-613H2.1 chr8 27011147 27012371 - processed_pseudogene KNOWN OTTHUMG00000163886.1 1225 1225 1 ENSG00000221616.1 MIR548H4 chr8 27048853 27048963 - miRNA KNOWN NA 111 111 1 ENSG00000253899.1 RP11-613H2.2 chr8 27063996 27065278 - processed_pseudogene KNOWN OTTHUMG00000163887.1 1283 1283 1 ENSG00000280186.1 RP11-483I13.6 chr1 108200413 108202743 + TEC KNOWN OTTHUMG00000175904.1 2331 2331 1 ENSG00000253903.2 RP11-521M14.2 chr8 27086076 27087783 + lincRNA NOVEL OTTHUMG00000163848.2 1708 815 2 ENSG00000221623.2 AC090150.1 chr8 27147709 27147797 + miRNA NOVEL NA 89 89 1 ENSG00000253888.1 RP11-521M14.1 chr8 27184321 27210494 + antisense NOVEL OTTHUMG00000163849.1 26174 585 3 ENSG00000015592.15 STMN4 chr8 27235323 27258420 - protein_coding KNOWN OTTHUMG00000099461.3 23098 3294 43 ENSG00000104228.11 TRIM35 chr8 27284887 27311319 - protein_coding KNOWN OTTHUMG00000102047.2 26433 4269 18 ENSG00000120899.16 PTK2B chr8 27311482 27459391 + protein_coding KNOWN OTTHUMG00000102082.6 147910 7933 194 ENSG00000273836.1 MIR6842 chr8 27433370 27433434 + miRNA KNOWN NA 65 65 1 ENSG00000120903.9 CHRNA2 chr8 27459762 27479883 - protein_coding KNOWN OTTHUMG00000102083.6 20122 4808 56 ENSG00000120915.12 EPHX2 chr8 27490779 27545564 + protein_coding KNOWN OTTHUMG00000102115.5 54786 4473 134 ENSG00000234770.1 GULOP chr8 27560274 27589073 + unitary_pseudogene KNOWN OTTHUMG00000154895.1 28800 748 6 ENSG00000196427.12 NBPF4 chr1 108223341 108244081 - protein_coding KNOWN OTTHUMG00000011318.5 20741 2586 31 ENSG00000120885.18 CLU chr8 27596917 27615031 - protein_coding KNOWN OTTHUMG00000102114.5 18115 6616 86 ENSG00000273705.1 MIR6843 chr8 27610601 27610751 - miRNA KNOWN NA 151 151 1 ENSG00000168077.12 SCARA3 chr8 27633868 27676776 + protein_coding KNOWN OTTHUMG00000163898.4 42909 4031 12 ENSG00000222862.2 RNU6-1086P chr8 27679836 27679935 + snRNA KNOWN NA 100 100 1 ENSG00000253560.1 RP11-16P20.2 chr8 27697217 27697526 - processed_pseudogene KNOWN OTTHUMG00000163899.1 310 310 1 ENSG00000279302.1 RP11-16P20.4 chr8 27701194 27703789 + TEC KNOWN OTTHUMG00000173423.1 2596 2596 1 ENSG00000265075.1 MIR3622B chr8 27701673 27701767 - miRNA KNOWN NA 95 95 1 ENSG00000147419.15 CCDC25 chr8 27733311 27772653 - protein_coding KNOWN OTTHUMG00000132173.4 39343 4415 68 ENSG00000253875.1 RP11-16P20.3 chr8 27733338 27756426 + antisense NOVEL OTTHUMG00000163900.1 23089 584 4 ENSG00000171320.13 ESCO2 chr8 27771949 27812640 + protein_coding KNOWN OTTHUMG00000163901.1 40692 7973 46 ENSG00000173662.18 TAS1R1 chr1 6555181 6579757 + protein_coding KNOWN OTTHUMG00000001441.2 24577 2892 22 ENSG00000238122.1 RP11-483I13.2 chr1 108261196 108273689 - lincRNA NOVEL OTTHUMG00000011319.2 12494 2481 2 ENSG00000202242.1 RNU6-1276P chr8 27773645 27773748 + snRNA KNOWN NA 104 104 1 ENSG00000168078.8 PBK chr8 27809620 27838095 - protein_coding KNOWN OTTHUMG00000102113.4 28476 2165 28 ENSG00000253176.3 RP11-1149M3.2 chr8 27838477 27840382 + processed_pseudogene KNOWN OTTHUMG00000163902.3 1906 717 3 ENSG00000168079.15 SCARA5 chr8 27869882 27992727 - protein_coding KNOWN OTTHUMG00000132172.2 122846 4435 29 ENSG00000265847.1 MIR4287 chr8 27886039 27886116 - miRNA KNOWN NA 78 78 1 ENSG00000253290.1 RP11-597M17.3 chr8 27903229 27903495 - unprocessed_pseudogene KNOWN OTTHUMG00000163928.1 267 267 1 ENSG00000253615.1 RP11-597M17.2 chr8 27903566 27903715 + unprocessed_pseudogene KNOWN OTTHUMG00000163929.1 150 150 1 ENSG00000253397.1 RP11-597M17.1 chr8 27904481 27910310 + antisense NOVEL OTTHUMG00000163927.1 5830 359 3 ENSG00000189233.10 NUGGC chr8 28021964 28083871 - protein_coding KNOWN OTTHUMG00000155970.3 61908 3959 23 ENSG00000134014.15 ELP3 chr8 28089673 28191156 + protein_coding KNOWN OTTHUMG00000102124.2 101484 5390 170 ENSG00000241361.7 SLC25A24P1 chr1 108272943 108337853 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000011320.5 64911 1882 14 ENSG00000250516.1 RP11-380I10.2 chr8 28225929 28227562 + processed_pseudogene KNOWN OTTHUMG00000160401.1 1634 936 2 ENSG00000253907.1 RP11-380I10.3 chr8 28238430 28238905 + processed_pseudogene KNOWN OTTHUMG00000163903.1 476 476 1 ENSG00000253690.1 RP11-380I10.4 chr8 28250063 28339255 - antisense NOVEL OTTHUMG00000163904.1 89193 887 2 ENSG00000239198.1 RPL5P22 chr8 28299683 28300566 + processed_pseudogene KNOWN OTTHUMG00000158585.1 884 884 1 ENSG00000168081.7 PNOC chr8 28316986 28343355 + protein_coding KNOWN OTTHUMG00000102125.3 26370 2126 12 ENSG00000186918.12 ZNF395 chr8 28345585 28402701 - protein_coding KNOWN OTTHUMG00000102137.2 57117 5819 55 ENSG00000214050.6 FBXO16 chr8 28348287 28490318 - protein_coding KNOWN OTTHUMG00000102147.3 142032 3972 64 ENSG00000254370.1 RP11-181B11.1 chr8 28415524 28420055 - sense_intronic NOVEL OTTHUMG00000163905.1 4532 511 2 ENSG00000207361.1 RNU6-178P chr8 28416448 28416551 + snRNA KNOWN NA 104 104 1 ENSG00000253567.1 RP11-181B11.2 chr8 28447264 28455902 + antisense NOVEL OTTHUMG00000163906.1 8639 733 5 ENSG00000186086.15 NBPF6 chr1 108375799 108471002 + protein_coding KNOWN OTTHUMG00000039830.4 95204 2947 74 ENSG00000104290.9 FZD3 chr8 28494205 28574268 + protein_coding KNOWN OTTHUMG00000102145.3 80064 13787 19 ENSG00000265251.1 MIR4288 chr8 28505116 28505182 - miRNA KNOWN NA 67 67 1 ENSG00000202411.1 RNA5SP259 chr8 28530411 28530519 + rRNA KNOWN NA 109 109 1 ENSG00000012232.7 EXTL3 chr8 28600469 28755599 + protein_coding KNOWN OTTHUMG00000102146.3 155131 13220 59 ENSG00000246339.5 EXTL3-AS1 chr8 28696198 28701464 - antisense KNOWN OTTHUMG00000164029.3 5267 4261 10 ENSG00000104299.13 INTS9 chr8 28767661 28890242 - protein_coding KNOWN OTTHUMG00000164030.1 122582 4905 150 ENSG00000254034.1 RP11-662B19.2 chr8 28798142 28799469 + antisense NOVEL OTTHUMG00000164031.1 1328 548 2 ENSG00000242958.1 RP11-662B19.1 chr8 28810103 28810418 + processed_pseudogene KNOWN OTTHUMG00000158588.2 316 316 1 ENSG00000147421.16 HMBOX1 chr8 28890394 29064764 + protein_coding KNOWN OTTHUMG00000172138.2 174371 6634 114 ENSG00000273710.1 Metazoa_SRP chr8 28915579 28915864 - misc_RNA NOVEL NA 286 286 1 ENSG00000243967.4 NBPF5P chr1 108375838 108410814 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000011317.7 34977 1606 18 ENSG00000259196.1 HMBOX1-IT1 chr8 28949676 28955955 + sense_intronic NOVEL OTTHUMG00000132209.5 6280 347 2 ENSG00000200719.1 RNA5SP260 chr8 29048494 29048604 - rRNA KNOWN NA 111 111 1 ENSG00000259366.1 CTD-2647L4.4 chr8 29055935 29056685 + sense_intronic NOVEL OTTHUMG00000172135.1 751 552 2 ENSG00000259607.1 CTD-2647L4.5 chr8 29067279 29068454 + antisense NOVEL OTTHUMG00000172136.1 1176 585 2 ENSG00000197892.11 KIF13B chr8 29067279 29263124 - protein_coding KNOWN OTTHUMG00000164032.1 195846 11112 97 ENSG00000254129.1 CTD-2647L4.1 chr8 29110573 29140729 + antisense NOVEL OTTHUMG00000164033.1 30157 694 5 ENSG00000253770.1 HMGB1P23 chr8 29218905 29219472 + processed_pseudogene KNOWN OTTHUMG00000164034.1 568 568 1 ENSG00000212034.1 AC084262.1 chr8 29269974 29270061 - miRNA NOVEL NA 88 88 1 ENSG00000263392.1 AC084262.2 chr8 29313756 29313848 - miRNA NOVEL NA 93 93 1 ENSG00000266476.1 AC084262.3 chr8 29323264 29323356 - miRNA NOVEL NA 93 93 1 ENSG00000238118.1 SLC25A24P2 chr1 108383736 108421295 - unprocessed_pseudogene KNOWN OTTHUMG00000039831.1 37560 510 3 ENSG00000120875.7 DUSP4 chr8 29333064 29350668 - protein_coding KNOWN OTTHUMG00000133395.2 17605 7257 9 ENSG00000260253.1 RP4-676L2.1 chr8 29352420 29353170 - sense_overlapping NOVEL OTTHUMG00000172754.1 751 751 1 ENSG00000253632.1 RP11-486M23.1 chr8 29527312 29530323 + lincRNA NOVEL OTTHUMG00000163795.1 3012 642 2 ENSG00000253182.1 RP11-486M23.2 chr8 29548171 29564341 + lincRNA NOVEL OTTHUMG00000163796.1 16171 564 2 ENSG00000280147.1 RP11-486M23.3 chr8 29587001 29588426 + TEC KNOWN OTTHUMG00000173472.1 1426 1426 1 ENSG00000280487.1 AC069181.1 chr8 29626721 29626854 - miRNA NOVEL NA 134 134 1 ENSG00000243844.1 RPL17P33 chr8 29632091 29632644 + processed_pseudogene KNOWN OTTHUMG00000158589.1 554 554 1 ENSG00000251191.6 LINC00589 chr8 29673922 29748109 - lincRNA KNOWN OTTHUMG00000163800.3 74188 2074 8 ENSG00000253490.4 AC145110.1 chr8 29748309 29798492 + lincRNA NOVEL OTTHUMG00000163801.2 50184 5541 11 ENSG00000248964.5 RP11-94H18.1 chr8 29815004 29854543 - lincRNA NOVEL OTTHUMG00000163812.3 39540 2074 6 ENSG00000224698.1 RP11-131J3.1 chr1 108420689 108433184 + lincRNA NOVEL OTTHUMG00000039829.1 12496 2481 2 ENSG00000254086.1 RP11-94H18.2 chr8 29864644 29871661 + lincRNA NOVEL OTTHUMG00000163813.1 7018 564 2 ENSG00000253604.1 RP11-489E7.1 chr8 29905735 29908956 + lincRNA NOVEL OTTHUMG00000163814.1 3222 550 2 ENSG00000253279.4 FAM183CP chr8 29921513 29953724 + lincRNA NOVEL OTTHUMG00000163817.1 32212 2957 6 ENSG00000221003.1 AC131254.1 chr8 29928605 29928689 + miRNA NOVEL NA 85 85 1 ENSG00000264788.1 MIR3148 chr8 29957272 29957348 - miRNA KNOWN NA 77 77 1 ENSG00000254013.1 MAP2K1P1 chr8 30027713 30028900 + processed_pseudogene KNOWN OTTHUMG00000163815.1 1188 1188 1 ENSG00000239175.1 RNU6-1218P chr8 30043801 30043908 - snRNA KNOWN NA 108 108 1 ENSG00000133872.12 SARAF chr8 30063012 30083208 - protein_coding KNOWN OTTHUMG00000133397.5 20197 2990 55 ENSG00000272256.1 RP11-489E7.4 chr8 30082758 30083467 + antisense NOVEL OTTHUMG00000185429.1 710 710 1 ENSG00000104660.16 LEPROTL1 chr8 30095398 30177208 + protein_coding KNOWN OTTHUMG00000163820.3 81811 5421 33 ENSG00000227832.1 ST13P21 chr1 108502358 108503455 + processed_pseudogene KNOWN OTTHUMG00000011458.1 1098 1098 1 ENSG00000241511.1 RPS15AP24 chr8 30117384 30117779 - processed_pseudogene KNOWN OTTHUMG00000158590.1 396 396 1 ENSG00000177669.3 MBOAT4 chr8 30131824 30144686 - protein_coding KNOWN OTTHUMG00000163824.1 12863 1512 3 ENSG00000271869.1 RP11-51J9.5 chr8 30155830 30156232 - lincRNA NOVEL OTTHUMG00000185430.1 403 403 1 ENSG00000104671.6 DCTN6 chr8 30156297 30183640 + protein_coding KNOWN OTTHUMG00000163828.2 27344 1984 36 ENSG00000253708.1 RP11-51J9.4 chr8 30176554 30180888 - antisense NOVEL OTTHUMG00000163830.1 4335 583 2 ENSG00000272375.1 RP11-51J9.6 chr8 30197404 30198048 + lincRNA NOVEL OTTHUMG00000185431.1 645 645 1 ENSG00000248159.1 HSPA8P11 chr8 30237382 30240997 + unprocessed_pseudogene KNOWN OTTHUMG00000160402.1 3616 1898 4 ENSG00000254316.1 CTD-2345M20.2 chr8 30249502 30250092 - processed_pseudogene KNOWN OTTHUMG00000163831.1 591 591 1 ENSG00000253346.1 CTD-3107M8.1 chr8 30331961 30332277 - processed_pseudogene KNOWN OTTHUMG00000163832.1 317 317 1 ENSG00000254152.1 CTD-3107M8.2 chr8 30349866 30350347 - processed_pseudogene KNOWN OTTHUMG00000163833.1 482 482 1 ENSG00000226483.2 RP5-964H19.2 chr1 108508574 108509243 + processed_pseudogene KNOWN OTTHUMG00000011459.2 670 670 1 ENSG00000127589.4 TUBBP1 chr8 30351873 30353518 + transcribed_processed_pseudogene KNOWN OTTHUMG00000163834.1 1646 1646 2 ENSG00000254109.4 RBPMS-AS1 chr8 30382119 30385401 - antisense NOVEL OTTHUMG00000163930.1 3283 1171 10 ENSG00000157110.14 RBPMS chr8 30384479 30572261 + protein_coding KNOWN OTTHUMG00000163845.6 187783 8931 116 ENSG00000279041.1 CTD-2373N4.3 chr8 30552345 30553766 + TEC KNOWN OTTHUMG00000163910.1 1422 1422 1 ENSG00000197265.7 GTF2E2 chr8 30578318 30658251 - protein_coding KNOWN OTTHUMG00000163934.2 79934 2595 31 ENSG00000253112.1 CTD-2373N4.5 chr8 30596914 30597532 + antisense NOVEL OTTHUMG00000163935.1 619 407 2 ENSG00000253457.2 SMIM18 chr8 30638600 30646064 + protein_coding KNOWN OTTHUMG00000163839.1 7465 955 7 ENSG00000254172.1 U5 chr8 30643689 30643802 + snRNA NOVEL NA 114 114 1 ENSG00000104687.11 GSR chr8 30678061 30727926 - protein_coding KNOWN OTTHUMG00000163946.3 49866 3237 64 ENSG00000104691.13 UBXN8 chr8 30732247 30767006 + protein_coding KNOWN OTTHUMG00000163851.9 34760 3217 57 ENSG00000162636.14 FAM102B chr1 108560089 108644900 + protein_coding KNOWN OTTHUMG00000010967.3 84812 9355 26 ENSG00000271081.1 RP11-465K4.4 chr8 30754236 30754539 - processed_pseudogene KNOWN OTTHUMG00000184836.1 304 304 1 ENSG00000104695.11 PPP2CB chr8 30774457 30814314 - protein_coding KNOWN OTTHUMG00000163949.2 39858 4516 34 ENSG00000133863.5 TEX15 chr8 30831544 30890606 - protein_coding KNOWN OTTHUMG00000163881.2 59063 11663 16 ENSG00000253204.1 RP5-1009N12.1 chr8 30921060 30921335 + processed_pseudogene KNOWN OTTHUMG00000163882.1 276 276 1 ENSG00000253793.1 RP11-293D9.2 chr8 30983459 30984321 - processed_pseudogene KNOWN OTTHUMG00000163912.1 863 863 1 ENSG00000172733.11 PURG chr8 30995802 31033715 - protein_coding KNOWN OTTHUMG00000157357.4 37914 3771 5 ENSG00000165392.8 WRN chr8 31033801 31173769 + protein_coding KNOWN OTTHUMG00000163894.2 139969 5634 61 ENSG00000253579.1 SUMO2P16 chr8 31131539 31131802 - processed_pseudogene KNOWN OTTHUMG00000163895.2 264 264 1 ENSG00000253961.1 RP11-363L24.3 chr8 31167078 31177167 - antisense NOVEL OTTHUMG00000163915.1 10090 758 6 ENSG00000229211.3 KCTD9P6 chr8 31219894 31220984 - processed_pseudogene KNOWN OTTHUMG00000163896.1 1091 950 2 ENSG00000162639.14 HENMT1 chr1 108648290 108661526 - protein_coding KNOWN OTTHUMG00000011123.1 13237 2426 41 ENSG00000253377.1 RP11-566H8.3 chr8 31275596 31384279 + lincRNA NOVEL OTTHUMG00000163916.1 108684 336 2 ENSG00000254095.1 RP11-566H8.2 chr8 31339197 31346479 + processed_transcript NOVEL OTTHUMG00000163913.1 7283 1228 8 ENSG00000253275.1 RP11-566H8.1 chr8 31497423 31498612 + lincRNA NOVEL OTTHUMG00000163914.1 1190 328 2 ENSG00000264794.2 AC104000.1 chr8 31585154 31585246 + miRNA NOVEL NA 93 93 1 ENSG00000222468.1 RNA5SP261 chr8 31598099 31598204 - rRNA KNOWN NA 106 106 1 ENSG00000157168.17 NRG1 chr8 31639386 32767959 + protein_coding KNOWN OTTHUMG00000163918.10 1128574 11328 157 ENSG00000253974.4 NRG1-IT1 chr8 32026219 32139475 + sense_intronic NOVEL OTTHUMG00000163966.2 113257 1695 14 ENSG00000252261.1 RNA5SP262 chr8 32192028 32192153 - rRNA KNOWN NA 126 126 1 ENSG00000200246.1 RNA5SP263 chr8 32256496 32256623 + rRNA KNOWN NA 128 128 1 ENSG00000254049.1 NRG1-IT3 chr8 32440746 32442725 + sense_intronic NOVEL OTTHUMG00000164003.1 1980 505 3 ENSG00000236679.2 RP4-669L17.1 chr1 347982 348366 - processed_pseudogene KNOWN OTTHUMG00000002854.4 385 385 1 ENSG00000204859.10 ZBTB48 chr1 6580001 6589280 + protein_coding KNOWN OTTHUMG00000001438.3 9280 4503 47 ENSG00000134186.10 PRPF38B chr1 108692323 108701803 + protein_coding KNOWN OTTHUMG00000010991.3 9481 5817 25 ENSG00000212407.1 RNU6-663P chr8 32911493 32911598 - snRNA KNOWN NA 106 106 1 ENSG00000247134.5 RP11-11N9.4 chr8 32996178 33044855 + lincRNA NOVEL OTTHUMG00000163952.1 48678 765 6 ENSG00000254346.2 MTND1P6 chr8 33014081 33015026 + processed_pseudogene KNOWN OTTHUMG00000163931.2 946 946 1 ENSG00000254090.1 MTND2P32 chr8 33015261 33017043 + processed_pseudogene KNOWN OTTHUMG00000163932.3 1783 1038 2 ENSG00000253393.1 RANP9 chr8 33039523 33039793 + processed_pseudogene KNOWN OTTHUMG00000163933.1 271 271 1 ENSG00000265562.1 AC104037.1 chr8 33195837 33195937 + miRNA NOVEL NA 101 101 1 ENSG00000253993.1 RP11-451O18.1 chr8 33226848 33227147 - processed_pseudogene KNOWN OTTHUMG00000163953.1 300 300 1 ENSG00000252735.1 RNU6-528P chr8 33338867 33338966 + snRNA KNOWN NA 100 100 1 ENSG00000272338.2 RP11-722E23.2 chr8 33360839 33361415 - lincRNA NOVEL OTTHUMG00000185434.2 577 577 1 ENSG00000172728.14 FUT10 chr8 33370824 33473422 - protein_coding KNOWN OTTHUMG00000163954.2 102599 5606 39 ENSG00000143107.7 FNDC7 chr1 108712657 108742740 + protein_coding KNOWN OTTHUMG00000011120.4 30084 3332 21 ENSG00000254061.1 RP11-359B20.1 chr8 33436268 33436700 - processed_pseudogene KNOWN OTTHUMG00000163955.1 433 433 1 ENSG00000129696.11 TTI2 chr8 33473386 33513601 - protein_coding KNOWN OTTHUMG00000163956.2 40216 4222 38 ENSG00000198042.9 MAK16 chr8 33484750 33501260 + protein_coding KNOWN OTTHUMG00000163957.4 16511 4846 30 ENSG00000239039.1 SNORD13 chr8 33513475 33513578 + snoRNA KNOWN NA 104 104 1 ENSG00000253232.1 RP11-359B20.5 chr8 33523154 33523291 + processed_pseudogene KNOWN OTTHUMG00000163979.1 138 138 1 ENSG00000252505.1 SNORA70 chr8 33540040 33540137 + snoRNA NOVEL NA 98 98 1 ENSG00000253995.1 RP11-10D7.5 chr8 33540185 33540493 + processed_pseudogene KNOWN OTTHUMG00000163959.1 309 309 1 ENSG00000133874.1 RNF122 chr8 33547755 33567125 - protein_coding KNOWN OTTHUMG00000163960.1 19371 1868 6 ENSG00000240189.3 RN7SL621P chr8 33580210 33580508 - misc_RNA KNOWN NA 299 299 1 ENSG00000133878.7 DUSP26 chr8 33591332 33600106 - protein_coding KNOWN OTTHUMG00000163961.3 8775 2052 10 ENSG00000232971.2 RP11-293A10.3 chr1 108734256 108734725 - antisense NOVEL OTTHUMG00000011121.2 470 386 2 ENSG00000253642.4 RP11-317N12.1 chr8 33604856 34039008 + lincRNA NOVEL OTTHUMG00000163972.4 434153 1418 13 ENSG00000253684.1 RP11-10D7.2 chr8 33641581 33641939 - processed_pseudogene KNOWN OTTHUMG00000163963.1 359 359 1 ENSG00000263794.2 RN7SL457P chr8 33715784 33716070 + misc_RNA KNOWN NA 287 287 1 ENSG00000253569.1 VENTXP5 chr8 33722305 33723079 - processed_pseudogene KNOWN OTTHUMG00000163947.1 775 775 1 ENSG00000240738.1 RP1-273G13.1 chr8 33859480 33860223 - processed_pseudogene KNOWN OTTHUMG00000158592.1 744 744 1 ENSG00000188512.6 RP1-273G13.2 chr8 33969567 33969879 - processed_pseudogene KNOWN OTTHUMG00000163948.1 313 313 1 ENSG00000254194.4 RP1-273G13.3 chr8 33973701 34009595 - lincRNA NOVEL OTTHUMG00000163989.1 35895 511 7 ENSG00000254302.1 RP11-431M3.1 chr8 34174886 34184895 + lincRNA NOVEL OTTHUMG00000163985.1 10010 537 2 ENSG00000253108.1 RP1-84O15.2 chr8 34228439 34346731 + lincRNA NOVEL OTTHUMG00000163990.1 118293 582 5 ENSG00000254033.1 RP11-431M3.2 chr8 34229294 34248946 - lincRNA NOVEL OTTHUMG00000163991.1 19653 430 2 ENSG00000116266.9 STXBP3 chr1 108746674 108809526 + protein_coding KNOWN OTTHUMG00000011122.3 62853 5895 41 ENSG00000215264.4 RPL10AP3 chr8 34322992 34323642 - processed_pseudogene KNOWN OTTHUMG00000158593.1 651 651 1 ENSG00000254344.1 LINC01288 chr8 34784052 34864798 + lincRNA NOVEL OTTHUMG00000163964.1 80747 529 4 ENSG00000243181.2 RP11-734J24.1 chr8 34874159 34874633 + processed_pseudogene KNOWN OTTHUMG00000158594.2 475 475 1 ENSG00000265560.1 AC098612.1 chr8 34970206 34970299 + miRNA NOVEL NA 94 94 1 ENSG00000156687.9 UNC5D chr8 35235457 35796550 + protein_coding KNOWN OTTHUMG00000157145.2 561094 10816 97 ENSG00000279099.1 RP11-595O22.1 chr8 35254344 35256605 + TEC KNOWN OTTHUMG00000163984.1 2262 2262 1 ENSG00000232024.2 LSM12P1 chr8 35525176 35525763 - processed_pseudogene KNOWN OTTHUMG00000157150.1 588 588 1 ENSG00000253452.4 RP11-473J6.1 chr8 35862123 35970665 + lincRNA NOVEL OTTHUMG00000163986.1 108543 777 12 ENSG00000253524.1 RP11-89M20.2 chr8 36004316 36095046 - lincRNA NOVEL OTTHUMG00000163987.1 90731 442 6 ENSG00000254309.1 RP11-89M20.1 chr8 36121398 36121683 - processed_pseudogene KNOWN OTTHUMG00000163973.1 286 286 1 ENSG00000228076.2 RP11-475E11.2 chr1 108766841 108767584 - processed_pseudogene KNOWN OTTHUMG00000011230.2 744 744 1 ENSG00000253504.1 RP11-593P24.2 chr8 36277763 36278886 - unprocessed_pseudogene KNOWN OTTHUMG00000163974.1 1124 1124 1 ENSG00000254384.1 MTND6P19 chr8 36278960 36279483 + unprocessed_pseudogene KNOWN OTTHUMG00000163975.1 524 524 1 ENSG00000253685.1 RP11-593P24.3 chr8 36279491 36279696 - unprocessed_pseudogene KNOWN OTTHUMG00000163976.1 206 206 1 ENSG00000253610.1 RP11-139F9.1 chr8 36308245 36308364 + processed_pseudogene KNOWN OTTHUMG00000163977.1 120 120 1 ENSG00000206871.1 RNU6-533P chr8 36309584 36309690 - snRNA KNOWN NA 107 107 1 ENSG00000254320.1 RP11-593P24.4 chr8 36321039 36321404 - processed_pseudogene KNOWN OTTHUMG00000163978.1 366 300 2 ENSG00000253363.4 RP11-962G15.1 chr8 36537391 36779164 - lincRNA NOVEL OTTHUMG00000163980.2 241774 673 8 ENSG00000244708.1 RPL23P10 chr8 36581180 36581591 - processed_pseudogene KNOWN OTTHUMG00000158595.2 412 412 1 ENSG00000199985.1 RNA5SP264 chr8 36764445 36764551 + rRNA KNOWN NA 107 107 1 ENSG00000215262.6 KCNU1 chr8 36784324 36936128 + protein_coding KNOWN OTTHUMG00000163981.1 151805 3969 70 ENSG00000162641.17 AKNAD1 chr1 108815898 108858228 - protein_coding KNOWN OTTHUMG00000011231.8 42331 4915 85 ENSG00000274489.1 RP11-962G15.2 chr8 36795255 36795862 - processed_pseudogene KNOWN OTTHUMG00000187704.1 608 608 1 ENSG00000219491.6 TPT1P8 chr8 36888482 36889307 + unprocessed_pseudogene KNOWN OTTHUMG00000160404.3 826 555 2 ENSG00000243503.2 AC090453.1 chr8 36987977 36988412 - processed_pseudogene KNOWN OTTHUMG00000158604.2 436 436 1 ENSG00000254038.1 RP11-419C23.1 chr8 37067441 37069418 - lincRNA NOVEL OTTHUMG00000163982.1 1978 639 2 ENSG00000253650.1 SMARCE1P4 chr8 37095150 37095390 + processed_pseudogene KNOWN OTTHUMG00000163983.1 241 241 1 ENSG00000275998.1 AC068207.1 chr8 37173829 37173923 + miRNA NOVEL NA 95 95 1 ENSG00000253123.3 RP11-527N22.1 chr8 37326575 37331984 - processed_transcript NOVEL OTTHUMG00000163995.1 5410 4239 4 ENSG00000253746.1 RP11-527N22.2 chr8 37405439 37406724 - lincRNA NOVEL OTTHUMG00000164278.1 1286 578 2 ENSG00000253161.4 RP11-150O12.1 chr8 37421341 37554183 - lincRNA NOVEL OTTHUMG00000163996.2 132843 1522 18 ENSG00000253388.1 RP11-150O12.2 chr8 37480089 37480809 + lincRNA NOVEL OTTHUMG00000163997.1 721 169 2 ENSG00000274068.1 RP11-475E11.9 chr1 108837660 108963484 - protein_coding PUTATIVE OTTHUMG00000186734.1 125825 557 6 ENSG00000253414.2 RP11-150O12.6 chr8 37516410 37517021 - sense_intronic NOVEL OTTHUMG00000164286.2 612 510 2 ENSG00000254111.2 RP11-150O12.5 chr8 37560366 37565377 + lincRNA NOVEL OTTHUMG00000164287.2 5012 847 3 ENSG00000254290.1 RP11-150O12.3 chr8 37597480 37599858 - lincRNA NOVEL OTTHUMG00000163998.1 2379 2379 3 ENSG00000254306.1 RP11-150O12.4 chr8 37600537 37625873 - lincRNA NOVEL OTTHUMG00000163999.1 25337 551 5 ENSG00000253344.1 RP11-346L1.2 chr8 37626015 37674387 - antisense NOVEL OTTHUMG00000164000.1 48373 836 2 ENSG00000223215.1 RNU6-607P chr8 37668898 37669005 + snRNA KNOWN NA 108 108 1 ENSG00000183779.6 ZNF703 chr8 37695751 37700021 + protein_coding KNOWN OTTHUMG00000164001.3 4271 3349 2 ENSG00000253181.1 RP11-863K10.2 chr8 37717579 37733756 + antisense NOVEL OTTHUMG00000164004.1 16178 1228 3 ENSG00000183154.1 RP11-863K10.7 chr8 37734761 37737426 - antisense NOVEL OTTHUMG00000164036.1 2666 2086 2 ENSG00000147475.13 ERLIN2 chr8 37736599 37759101 + protein_coding KNOWN OTTHUMG00000164005.3 22503 9464 84 ENSG00000203897.3 SPATA42 chr1 108857217 108858524 + antisense NOVEL OTTHUMG00000011731.1 1308 608 5 ENSG00000233170.4 RP11-863K10.4 chr8 37747338 37748004 - processed_pseudogene KNOWN OTTHUMG00000164006.3 667 667 1 ENSG00000147471.10 PROSC chr8 37762593 37779767 + protein_coding KNOWN OTTHUMG00000164024.3 17175 3428 40 ENSG00000020181.16 GPR124 chr8 37784191 37844896 + protein_coding KNOWN OTTHUMG00000156182.4 60706 7061 41 ENSG00000104221.11 BRF2 chr8 37843268 37849904 - protein_coding KNOWN OTTHUMG00000164025.2 6637 2760 17 ENSG00000156675.14 RAB11FIP1 chr8 37858618 37899467 - protein_coding KNOWN OTTHUMG00000164026.2 40850 9602 24 ENSG00000280064.1 RP11-205M5.3 chr8 37858949 37861333 + TEC KNOWN OTTHUMG00000164037.1 2385 2385 1 ENSG00000241032.3 RN7SL709P chr8 37908738 37909037 + misc_RNA KNOWN NA 300 300 1 ENSG00000169154.5 GOT1L1 chr8 37934281 37940129 - protein_coding KNOWN OTTHUMG00000164027.3 5849 1589 15 ENSG00000264965.1 AC144573.1 chr8 37949736 37949831 - miRNA NOVEL NA 96 96 1 ENSG00000188778.4 ADRB3 chr8 37962991 37966965 - protein_coding KNOWN OTTHUMG00000164028.2 3975 2950 6 ENSG00000121957.11 GPSM2 chr1 108875350 108934545 + protein_coding KNOWN OTTHUMG00000011730.3 59196 8099 47 ENSG00000270865.1 KB-1836B5.3 chr8 37983070 37983373 + processed_pseudogene KNOWN OTTHUMG00000184791.1 304 304 1 ENSG00000187840.4 EIF4EBP1 chr8 38030341 38060365 + protein_coding KNOWN OTTHUMG00000164012.1 30025 1073 6 ENSG00000260949.1 KB-1836B5.1 chr8 38062881 38063791 + sense_overlapping NOVEL OTTHUMG00000164002.1 911 911 1 ENSG00000272128.1 KB-1836B5.4 chr8 38099471 38099931 + lincRNA NOVEL OTTHUMG00000185441.1 461 461 1 ENSG00000129691.14 ASH2L chr8 38105242 38144076 + protein_coding KNOWN OTTHUMG00000164016.6 38835 5910 104 ENSG00000253437.1 U6 chr8 38122374 38122480 + snRNA NOVEL NA 107 107 1 ENSG00000240015.2 RP11-90P5.5 chr8 38123274 38124651 + antisense NOVEL OTTHUMG00000164042.1 1378 621 2 ENSG00000147465.10 STAR chr8 38143649 38151265 - protein_coding KNOWN OTTHUMG00000164058.5 7617 3767 20 ENSG00000253356.1 RP11-90P5.2 chr8 38148741 38163772 + antisense NOVEL OTTHUMG00000164013.1 15032 562 2 ENSG00000175324.8 LSM1 chr8 38163321 38176730 - protein_coding KNOWN OTTHUMG00000164051.1 13410 1690 20 ENSG00000121940.14 CLCC1 chr1 108929508 108963457 - protein_coding KNOWN OTTHUMG00000011732.1 33950 4964 69 ENSG00000253739.1 U6 chr8 38166012 38166118 - snRNA NOVEL NA 107 107 1 ENSG00000156735.9 BAG4 chr8 38176533 38213301 + protein_coding KNOWN OTTHUMG00000164064.2 36769 4809 15 ENSG00000248585.2 RP11-90P5.1 chr8 38201699 38204238 - processed_pseudogene KNOWN OTTHUMG00000160439.2 2540 791 4 ENSG00000085788.12 DDHD2 chr8 38225218 38275558 + protein_coding KNOWN OTTHUMG00000164095.5 50341 10686 141 ENSG00000147535.15 PPAPDC1B chr8 38263130 38269243 - protein_coding KNOWN OTTHUMG00000165104.4 6114 4102 69 ENSG00000147548.15 WHSC1L1 chr8 38269697 38382272 - protein_coding KNOWN OTTHUMG00000165115.7 112576 15252 102 ENSG00000255487.1 RP11-513D5.5 chr8 38275888 38276680 + antisense NOVEL OTTHUMG00000165119.1 793 256 2 ENSG00000254898.1 RP11-513D5.2 chr8 38335981 38337551 + antisense NOVEL OTTHUMG00000165103.2 1571 434 2 ENSG00000272092.1 RP11-350N15.5 chr8 38382364 38383461 + lincRNA NOVEL OTTHUMG00000185445.1 1098 1098 1 ENSG00000165046.11 LETM2 chr8 38386207 38409527 + protein_coding KNOWN OTTHUMG00000165059.5 23321 6114 103 ENSG00000162413.15 KLHL21 chr1 6590724 6614607 - protein_coding KNOWN OTTHUMG00000001437.2 23884 6901 21 ENSG00000085433.14 WDR47 chr1 108970214 109042113 - protein_coding KNOWN OTTHUMG00000011734.3 71900 4423 90 ENSG00000254981.1 RP11-350N15.3 chr8 38400536 38401683 - antisense NOVEL OTTHUMG00000165098.1 1148 377 2 ENSG00000272159.1 RP11-350N15.6 chr8 38408048 38408742 - antisense NOVEL OTTHUMG00000185446.1 695 695 1 ENSG00000077782.18 FGFR1 chr8 38411138 38468834 - protein_coding KNOWN OTTHUMG00000147366.11 57697 12698 349 ENSG00000255201.1 RP11-350N15.4 chr8 38421889 38426096 + antisense NOVEL OTTHUMG00000165120.1 4208 534 2 ENSG00000239218.2 RPS20P22 chr8 38434347 38435664 - transcribed_processed_pseudogene KNOWN OTTHUMG00000158605.2 1318 1318 2 ENSG00000196166.3 C8orf86 chr8 38510834 38528662 - protein_coding KNOWN OTTHUMG00000163992.1 17829 2250 5 ENSG00000253361.1 RP11-675F6.3 chr8 38543652 38552680 - lincRNA NOVEL OTTHUMG00000163993.1 9029 379 3 ENSG00000254100.1 RP11-675F6.4 chr8 38552248 38559020 - lincRNA NOVEL OTTHUMG00000163994.1 6773 537 5 ENSG00000253570.1 RNF5P1 chr8 38600661 38601200 - processed_pseudogene KNOWN OTTHUMG00000163988.1 540 540 1 ENSG00000254321.1 RP11-495O10.1 chr8 38700626 38704855 - lincRNA NOVEL OTTHUMG00000164086.1 4230 735 4 ENSG00000237349.1 RP5-1065J22.2 chr1 108986963 108987245 - processed_pseudogene KNOWN OTTHUMG00000011728.1 283 283 1 ENSG00000147526.18 TACC1 chr8 38728186 38853028 + protein_coding KNOWN OTTHUMG00000164018.9 124843 12609 192 ENSG00000207258.1 Y_RNA chr8 38744020 38744131 + misc_RNA NOVEL NA 112 112 1 ENSG00000253586.1 RP11-723D22.2 chr8 38799643 38802296 + sense_intronic NOVEL OTTHUMG00000164068.1 2654 356 2 ENSG00000253829.1 RP11-723D22.3 chr8 38844866 38846439 - antisense NOVEL OTTHUMG00000164087.1 1574 387 2 ENSG00000169499.13 PLEKHA2 chr8 38901235 38973909 + protein_coding KNOWN OTTHUMG00000164069.8 72675 6325 59 ENSG00000253645.1 CTD-2544N14.3 chr8 38970360 38973011 - antisense NOVEL OTTHUMG00000164094.1 2652 650 2 ENSG00000169495.4 HTRA4 chr8 38974164 38988662 + protein_coding KNOWN OTTHUMG00000164070.3 14499 2095 9 ENSG00000169490.15 TM2D2 chr8 38988808 38996824 - protein_coding KNOWN OTTHUMG00000164098.1 8017 4459 32 ENSG00000168615.10 ADAM9 chr8 38996869 39105144 + protein_coding KNOWN OTTHUMG00000159783.4 108276 6913 103 ENSG00000207199.1 SNORD38 chr8 39018615 39018683 - snoRNA NOVEL NA 69 69 1 ENSG00000244716.3 RP11-20O24.4 chr1 108992282 108992836 + processed_pseudogene KNOWN OTTHUMG00000057601.1 555 555 1 ENSG00000197140.13 ADAM32 chr8 39106990 39284911 + protein_coding KNOWN OTTHUMG00000164071.4 177922 10044 118 ENSG00000243095.1 RPL3P10 chr8 39157538 39158701 - processed_pseudogene KNOWN OTTHUMG00000158606.1 1164 1164 1 ENSG00000253160.1 RP11-1113C11.2 chr8 39309909 39310443 - processed_pseudogene KNOWN OTTHUMG00000164099.1 535 535 1 ENSG00000196115.11 ADAM5 chr8 39314591 39417378 + unitary_pseudogene KNOWN OTTHUMG00000154982.3 102788 2852 115 ENSG00000197475.10 ADAM3A chr8 39451045 39522852 - unitary_pseudogene KNOWN OTTHUMG00000154991.2 71808 2999 158 ENSG00000278810.1 RP11-122L4.2 chr8 39536219 39552035 + unprocessed_pseudogene KNOWN OTTHUMG00000187708.1 15817 465 3 ENSG00000254067.1 RP11-122L4.1 chr8 39556146 39558533 + lincRNA NOVEL OTTHUMG00000164038.1 2388 680 3 ENSG00000254082.4 CTD-2024D23.1 chr8 39566705 39580134 + lincRNA NOVEL OTTHUMG00000164039.1 13430 564 7 ENSG00000168619.14 ADAM18 chr8 39584489 39730064 + protein_coding KNOWN OTTHUMG00000164040.1 145576 3825 84 ENSG00000104755.13 ADAM2 chr8 39743735 39838289 - protein_coding KNOWN OTTHUMG00000164041.3 94555 2905 109 ENSG00000228665.2 RP11-20O24.1 chr1 109030067 109030319 + processed_pseudogene KNOWN OTTHUMG00000042361.2 253 253 1 ENSG00000221018.1 AC136365.1 chr8 39756082 39756188 - miRNA NOVEL NA 107 107 1 ENSG00000253332.1 KB-1582A10.1 chr8 39860219 39860525 + processed_pseudogene KNOWN OTTHUMG00000164056.1 307 307 1 ENSG00000253233.1 KB-1582A10.2 chr8 39867436 39867812 - processed_pseudogene KNOWN OTTHUMG00000164721.1 377 186 2 ENSG00000131203.11 IDO1 chr8 39902275 39928444 + protein_coding KNOWN OTTHUMG00000164057.4 26170 3261 58 ENSG00000253939.1 RP11-44K6.3 chr8 39903775 39995248 - antisense NOVEL OTTHUMG00000164192.2 91474 502 3 ENSG00000253838.1 RP11-44K6.2 chr8 39914229 39915721 + sense_intronic NOVEL OTTHUMG00000164188.1 1493 102 2 ENSG00000254287.1 RP11-44K6.4 chr8 39918076 39920890 - antisense NOVEL OTTHUMG00000164193.1 2815 605 2 ENSG00000188676.12 IDO2 chr8 39934614 40016391 + protein_coding KNOWN OTTHUMG00000141271.3 81778 4444 36 ENSG00000253790.1 RP11-44K6.5 chr8 39997869 39998499 - processed_pseudogene KNOWN OTTHUMG00000164194.1 631 631 1 ENSG00000253381.1 RP11-359E19.1 chr8 40104169 40107935 + lincRNA NOVEL OTTHUMG00000164043.1 3767 187 2 ENSG00000228054.2 RANP5 chr1 109046828 109047482 + processed_pseudogene KNOWN OTTHUMG00000042362.2 655 655 1 ENSG00000253665.1 RP11-359E19.2 chr8 40114651 40127468 + lincRNA NOVEL OTTHUMG00000164044.1 12818 739 3 ENSG00000176907.4 C8orf4 chr8 40153455 40155308 + protein_coding KNOWN OTTHUMG00000164045.1 1854 1854 1 ENSG00000254143.1 RP11-470M17.2 chr8 40161458 40172612 + lincRNA NOVEL OTTHUMG00000164046.1 11155 531 4 ENSG00000253802.1 CTA-392C11.1 chr8 40298741 40343402 - lincRNA NOVEL OTTHUMG00000164047.1 44662 1583 8 ENSG00000253354.1 CTA-392C11.2 chr8 40370028 40401848 + lincRNA NOVEL OTTHUMG00000164048.1 31821 473 4 ENSG00000272479.1 RP11-301G7.1 chr8 40519565 40520158 - lincRNA NOVEL OTTHUMG00000185447.1 594 594 1 ENSG00000165061.13 ZMAT4 chr8 40530590 40897833 - protein_coding KNOWN OTTHUMG00000164049.1 367244 3691 42 ENSG00000254383.1 RP11-465K16.1 chr8 40900016 40901854 - lincRNA NOVEL OTTHUMG00000164050.1 1839 494 2 ENSG00000206867.1 RNU6-356P chr8 41032892 41032998 + snRNA KNOWN NA 107 107 1 ENSG00000104332.10 SFRP1 chr8 41261958 41309497 - protein_coding KNOWN OTTHUMG00000164074.2 47540 4761 6 ENSG00000197780.8 TAF13 chr1 109062486 109076002 - protein_coding KNOWN OTTHUMG00000042363.4 13517 1400 9 ENSG00000263372.1 MIR548AO chr8 41271048 41271143 - miRNA KNOWN NA 96 96 1 ENSG00000239281.2 RPS29P2 chr8 41271431 41271566 + processed_pseudogene KNOWN OTTHUMG00000158607.2 136 136 1 ENSG00000253509.1 CTD-3080F16.3 chr8 41275115 41277003 - sense_intronic NOVEL OTTHUMG00000164075.2 1889 255 2 ENSG00000206852.1 RNU6-895P chr8 41298163 41298265 + snRNA KNOWN NA 103 103 1 ENSG00000238936.1 SNORD65 chr8 41426655 41426727 + snoRNA NOVEL NA 73 73 1 ENSG00000253396.1 RP11-15G16.1 chr8 41435298 41440419 + lincRNA NOVEL OTTHUMG00000164076.1 5122 523 3 ENSG00000147533.15 GOLGA7 chr8 41490396 41510980 + protein_coding KNOWN OTTHUMG00000164077.1 20585 2474 36 ENSG00000253943.1 KRT18P37 chr8 41511240 41512521 + processed_pseudogene KNOWN OTTHUMG00000164078.1 1282 1282 1 ENSG00000147536.10 GINS4 chr8 41529206 41545046 + protein_coding KNOWN OTTHUMG00000164079.2 15841 5475 45 ENSG00000253133.1 RP11-360L9.4 chr8 41534155 41578368 - antisense NOVEL OTTHUMG00000164080.2 44214 559 3 ENSG00000273382.1 RP5-1065J22.8 chr1 109087971 109090858 - antisense NOVEL OTTHUMG00000186359.1 2888 2888 1 ENSG00000253174.2 RP11-360L9.7 chr8 41540381 41545044 - antisense NOVEL OTTHUMG00000164081.2 4664 1189 4 ENSG00000158669.10 AGPAT6 chr8 41577187 41625001 + protein_coding KNOWN OTTHUMG00000164082.2 47815 7939 54 ENSG00000264578.1 RP11-360L9.8 chr8 41609692 41621502 - antisense NOVEL OTTHUMG00000179554.1 11811 729 2 ENSG00000165066.12 NKX6-3 chr8 41645178 41650669 - protein_coding KNOWN OTTHUMG00000164083.3 5492 2412 5 ENSG00000029534.18 ANK1 chr8 41653220 41896762 - protein_coding KNOWN OTTHUMG00000150281.3 243543 10799 210 ENSG00000274705.1 AC113133.1 chr8 41660414 41660525 - miRNA NOVEL NA 112 112 1 ENSG00000253389.2 RP11-930P14.1 chr8 41660991 41665566 + antisense NOVEL OTTHUMG00000164084.2 4576 1374 6 ENSG00000277839.1 AC113133.2 chr8 41734814 41734892 + miRNA NOVEL NA 79 79 1 ENSG00000207101.1 Y_RNA chr8 41803349 41803450 + misc_RNA NOVEL NA 102 102 1 ENSG00000260588.1 RP11-930P14.2 chr8 41828165 41829934 - lincRNA NOVEL OTTHUMG00000164085.2 1770 1770 1 ENSG00000215717.5 TMEM167B chr1 109089803 109096934 + protein_coding KNOWN OTTHUMG00000042364.2 7132 4574 9 ENSG00000241834.3 RN7SL149P chr8 41840059 41840339 - misc_RNA KNOWN NA 281 281 1 ENSG00000083168.8 KAT6A chr8 41929479 42051990 - protein_coding KNOWN OTTHUMG00000150453.2 122512 11852 84 ENSG00000238966.1 SNORD112 chr8 42043504 42043575 - snoRNA NOVEL NA 72 72 1 ENSG00000277937.1 AC103724.1 chr8 42078863 42078973 - miRNA NOVEL NA 111 111 1 ENSG00000244235.2 RP11-589C21.1 chr8 42101318 42101836 + processed_pseudogene KNOWN OTTHUMG00000158608.2 519 519 1 ENSG00000253135.1 RP11-589C21.2 chr8 42128774 42129249 - processed_pseudogene KNOWN OTTHUMG00000164059.1 476 476 1 ENSG00000271938.1 RP11-589C21.6 chr8 42139461 42139752 - lincRNA NOVEL OTTHUMG00000185448.1 292 292 1 ENSG00000261449.1 RP11-589C21.5 chr8 42151772 42152763 - antisense NOVEL OTTHUMG00000173375.1 992 992 1 ENSG00000070718.10 AP3M2 chr8 42152946 42171673 + protein_coding KNOWN OTTHUMG00000164060.3 18728 6276 87 ENSG00000104368.16 PLAT chr8 42175233 42207724 - protein_coding KNOWN OTTHUMG00000164072.1 32492 6618 102 ENSG00000278249.1 SCARNA2 chr1 109100193 109100612 + scaRNA KNOWN NA 420 420 1 ENSG00000253408.4 RP11-231D20.2 chr8 42233675 42271197 - antisense NOVEL OTTHUMG00000164073.1 37523 1762 16 ENSG00000104365.12 IKBKB chr8 42271302 42332653 + protein_coding KNOWN OTTHUMG00000164092.2 61352 10239 328 ENSG00000070501.10 POLB chr8 42338454 42371808 + protein_coding KNOWN OTTHUMG00000164093.4 33355 4106 119 ENSG00000240395.1 RPL5P23 chr8 42341767 42342634 - processed_pseudogene KNOWN OTTHUMG00000158609.1 868 868 1 ENSG00000104371.4 DKK4 chr8 42374068 42377232 - protein_coding KNOWN OTTHUMG00000164167.1 3165 894 4 ENSG00000078668.12 VDAC3 chr8 42391624 42405897 + protein_coding KNOWN OTTHUMG00000164168.2 14274 3141 80 ENSG00000168575.8 SLC20A2 chr8 42416475 42541926 - protein_coding KNOWN OTTHUMG00000164169.1 125452 6641 65 ENSG00000254131.1 RP11-1007J8.1 chr8 42484600 42485019 + processed_pseudogene KNOWN OTTHUMG00000164170.1 420 420 1 ENSG00000254165.1 RP11-503E24.2 chr8 42537529 42538304 - antisense NOVEL OTTHUMG00000164171.1 776 708 2 ENSG00000176209.10 SMIM19 chr8 42541155 42555193 + protein_coding KNOWN OTTHUMG00000157060.5 14039 4056 28 ENSG00000270066.3 SCARNA2 chr1 109100193 109100619 + lincRNA KNOWN OTTHUMG00000184013.1 427 427 1 ENSG00000147432.5 CHRNB3 chr8 42697376 42737407 + protein_coding KNOWN OTTHUMG00000165262.2 40032 2587 14 ENSG00000255101.1 RP11-412B14.1 chr8 42705583 42721946 - antisense NOVEL OTTHUMG00000165273.1 16364 682 3 ENSG00000255361.1 RP11-412B14.2 chr8 42725547 42726228 - processed_pseudogene KNOWN OTTHUMG00000165274.2 682 682 1 ENSG00000147434.7 CHRNA6 chr8 42752620 42796392 - protein_coding KNOWN OTTHUMG00000165275.1 43773 2596 23 ENSG00000131931.7 THAP1 chr8 42836674 42843325 - protein_coding KNOWN OTTHUMG00000165276.1 6652 2462 10 ENSG00000120925.12 RNF170 chr8 42849637 42897290 - protein_coding KNOWN OTTHUMG00000165277.1 47654 6055 53 ENSG00000242719.3 RN7SL806P chr8 42881236 42881517 + misc_RNA KNOWN NA 282 282 1 ENSG00000266044.1 MIR4469 chr8 42896197 42896275 - miRNA KNOWN NA 79 79 1 ENSG00000168172.7 HOOK3 chr8 42896932 43030539 + protein_coding KNOWN OTTHUMG00000165278.3 133608 15250 61 ENSG00000202514.1 Y_RNA chr8 42949388 42949495 - misc_RNA NOVEL NA 108 108 1 ENSG00000116273.5 PHF13 chr1 6613685 6624033 + protein_coding KNOWN OTTHUMG00000001439.1 10349 3681 6 ENSG00000251484.3 RP5-1065J22.4 chr1 109103535 109104766 - processed_pseudogene KNOWN OTTHUMG00000011733.3 1232 609 2 ENSG00000254673.1 RP11-598P20.5 chr8 43018424 43077334 + protein_coding NOVEL OTTHUMG00000165287.2 58911 623 6 ENSG00000168522.11 FNTA chr8 43034194 43085788 + protein_coding KNOWN OTTHUMG00000165279.3 51595 9551 80 ENSG00000200731.1 RNU1-124P chr8 43073474 43073618 + snRNA KNOWN NA 145 145 1 ENSG00000185900.8 POMK chr8 43093506 43123434 + protein_coding KNOWN OTTHUMG00000164100.2 29929 1877 13 ENSG00000254198.1 RP11-598P20.3 chr8 43125995 43126397 - processed_pseudogene KNOWN OTTHUMG00000164101.1 403 403 1 ENSG00000165102.13 HGSNAT chr8 43140455 43202855 + protein_coding KNOWN OTTHUMG00000164102.1 62401 8943 67 ENSG00000253611.1 VN1R46P chr8 43219960 43220809 - processed_pseudogene KNOWN OTTHUMG00000164103.1 850 850 1 ENSG00000253884.1 RP11-726G23.2 chr8 43246755 43246935 - processed_pseudogene KNOWN OTTHUMG00000164104.1 181 181 1 ENSG00000255166.1 RP11-726G23.11 chr8 43247191 43247410 + processed_pseudogene KNOWN OTTHUMG00000165528.1 220 220 1 ENSG00000253312.1 RP11-359P18.2 chr8 43251711 43251858 + processed_pseudogene KNOWN OTTHUMG00000164105.1 148 148 1 ENSG00000179902.11 C1orf194 chr1 109105951 109113857 - protein_coding KNOWN OTTHUMG00000011735.3 7907 1235 24 ENSG00000253186.2 RP11-726G23.3 chr8 43253732 43254089 + unprocessed_pseudogene KNOWN OTTHUMG00000164106.2 358 300 2 ENSG00000253606.1 AFG3L2P1 chr8 43270198 43271962 - processed_pseudogene KNOWN OTTHUMG00000164107.1 1765 1765 1 ENSG00000253486.1 RP11-726G23.7 chr8 43274782 43275291 - processed_pseudogene KNOWN OTTHUMG00000164108.1 510 510 1 ENSG00000234713.3 RP11-726G23.10 chr8 43276270 43276823 - processed_pseudogene KNOWN OTTHUMG00000164109.1 554 554 1 ENSG00000253707.1 RP11-726G23.8 chr8 43284626 43284806 - processed_pseudogene KNOWN OTTHUMG00000164110.1 181 181 1 ENSG00000188877.10 POTEA chr8 43292483 43363518 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000164111.3 71036 2268 27 ENSG00000238509.1 RNU6-104P chr8 43303376 43303482 + snRNA KNOWN NA 107 107 1 ENSG00000255497.1 RP11-726G23.12 chr8 43313948 43314200 + processed_pseudogene KNOWN OTTHUMG00000165529.1 253 253 1 ENSG00000280822.1 AC022616.1 chr8 43366713 43366789 - miRNA NOVEL NA 77 77 1 ENSG00000254342.1 RP11-726G23.6 chr8 43372559 43372677 + processed_pseudogene KNOWN OTTHUMG00000164112.1 119 119 1 ENSG00000116299.15 KIAA1324 chr1 109113679 109206781 + protein_coding KNOWN OTTHUMG00000011725.4 93103 9300 146 ENSG00000201329.2 U3 chr8 43378297 43378510 + snoRNA NOVEL NA 214 214 1 ENSG00000281402.1 AC022616.2 chr8 43381784 43381874 - miRNA NOVEL NA 91 91 1 ENSG00000250637.2 RP11-359P18.1 chr8 43442902 43452912 + unprocessed_pseudogene KNOWN OTTHUMG00000160408.2 10011 643 5 ENSG00000254069.2 RP11-359P18.7 chr8 43493937 43494762 + processed_pseudogene KNOWN OTTHUMG00000164113.2 826 826 1 ENSG00000253319.1 RP11-359P18.8 chr8 43511820 43512033 - processed_pseudogene KNOWN OTTHUMG00000164114.1 214 214 1 ENSG00000253418.1 SNX18P27 chr8 43513643 43514421 + processed_pseudogene KNOWN OTTHUMG00000164115.1 779 779 1 ENSG00000254145.1 RP11-359P18.5 chr8 43539137 43539472 + processed_pseudogene KNOWN OTTHUMG00000164116.1 336 336 1 ENSG00000253748.2 CYP4F44P chr8 43539973 43540927 + unprocessed_pseudogene KNOWN OTTHUMG00000164117.2 955 412 3 ENSG00000253195.2 RP11-359P18.6 chr8 43542076 43544057 + unprocessed_pseudogene KNOWN OTTHUMG00000164118.2 1982 311 2 ENSG00000253845.1 RP11-643N23.2 chr8 43672823 43673075 + processed_pseudogene KNOWN OTTHUMG00000164119.1 253 253 1 ENSG00000031698.11 SARS chr1 109213918 109238169 + protein_coding KNOWN OTTHUMG00000011726.3 24252 3836 34 ENSG00000253198.1 RP11-643N23.1 chr8 43674270 43674591 - processed_pseudogene KNOWN OTTHUMG00000164120.1 322 322 1 ENSG00000276685.1 pRNA chr8 46028804 46028892 - misc_RNA NOVEL NA 89 89 1 ENSG00000253425.2 HSPA8P13 chr8 46549089 46550802 + unprocessed_pseudogene KNOWN OTTHUMG00000164121.2 1714 472 2 ENSG00000248498.3 ASNSP1 chr8 46579213 46614523 - unprocessed_pseudogene KNOWN OTTHUMG00000165535.1 35311 1807 10 ENSG00000254070.1 RP11-790L1.3 chr8 46671839 46671926 + processed_pseudogene KNOWN OTTHUMG00000164335.1 88 88 1 ENSG00000251470.1 ASNSP4 chr8 46697630 46698688 + unprocessed_pseudogene KNOWN OTTHUMG00000160508.1 1059 447 3 ENSG00000228984.3 RP11-101E19.8 chr8 46784800 46785928 + processed_pseudogene KNOWN OTTHUMG00000164129.1 1129 1129 1 ENSG00000250857.3 TRIM60P15 chr8 46792065 46793064 + processed_pseudogene KNOWN OTTHUMG00000160410.3 1000 712 2 ENSG00000253314.4 LINC00293 chr8 46822237 46854307 + lincRNA NOVEL OTTHUMG00000164130.2 32071 1914 30 ENSG00000253828.2 MTND1P7 chr8 46827228 46828409 - processed_pseudogene KNOWN OTTHUMG00000164131.2 1182 1182 1 ENSG00000143126.7 CELSR2 chr1 109250019 109275750 + protein_coding KNOWN OTTHUMG00000012003.1 25732 12349 51 ENSG00000279893.1 AC021451.1 chr8 46828485 46829621 - pseudogene NOVEL NA 1137 1134 2 ENSG00000252594.1 RNU6-656P chr8 46831050 46831156 + snRNA KNOWN NA 107 107 1 ENSG00000254118.1 RP11-101E19.4 chr8 46837578 46838706 - processed_pseudogene KNOWN OTTHUMG00000164133.1 1129 1129 1 ENSG00000254156.1 MTND6P20 chr8 46838788 46839205 + transcribed_processed_pseudogene KNOWN OTTHUMG00000164134.1 418 418 1 ENSG00000253803.1 RP11-101E19.7 chr8 46870902 46872045 - processed_pseudogene KNOWN OTTHUMG00000164135.1 1144 1144 1 ENSG00000253745.1 RP11-350F16.1 chr8 46922561 46928832 + lincRNA NOVEL OTTHUMG00000164136.1 6272 605 2 ENSG00000253782.1 RP11-350F16.2 chr8 46930840 46934446 - lincRNA NOVEL OTTHUMG00000164137.1 3607 460 3 ENSG00000215179.5 MAPK6PS4 chr8 46972476 46974617 - processed_pseudogene KNOWN OTTHUMG00000164138.2 2142 2142 1 ENSG00000222099.1 RN7SKP32 chr8 47068021 47068323 - misc_RNA KNOWN NA 303 303 1 ENSG00000281136.1 AC026241.1 chr8 47085350 47085426 + miRNA NOVEL NA 77 77 1 ENSG00000134222.15 PSRC1 chr1 109279556 109283186 - protein_coding KNOWN OTTHUMG00000012000.5 3631 2855 72 ENSG00000248347.3 RP11-1134I14.2 chr8 47089572 47198861 - unprocessed_pseudogene KNOWN OTTHUMG00000160446.3 109290 1474 10 ENSG00000200986.1 RNU6-819P chr8 47131781 47131887 - snRNA KNOWN NA 107 107 1 ENSG00000188873.4 RPL10AP2 chr8 47157118 47157771 + processed_pseudogene KNOWN OTTHUMG00000158610.1 654 654 1 ENSG00000248531.3 NDUFA5P12 chr8 47164870 47165524 + unprocessed_pseudogene KNOWN OTTHUMG00000160522.3 655 343 2 ENSG00000254348.1 RP11-1134I14.4 chr8 47189305 47189560 + processed_pseudogene KNOWN OTTHUMG00000164146.1 256 256 1 ENSG00000255366.1 RP11-1134I14.8 chr8 47190772 47193262 + lincRNA NOVEL OTTHUMG00000164145.2 2491 2491 1 ENSG00000253502.1 ATP6V1G1P2 chr8 47194002 47194347 - processed_pseudogene KNOWN OTTHUMG00000164147.1 346 346 1 ENSG00000253817.1 RP11-1134I14.6 chr8 47198032 47198323 - processed_pseudogene KNOWN OTTHUMG00000164148.1 292 292 1 ENSG00000215177.3 IGLV8OR8-1 chr8 47202444 47202897 - IG_V_pseudogene KNOWN OTTHUMG00000164149.4 454 352 2 ENSG00000164808.15 SPIDR chr8 47260575 47736306 + protein_coding KNOWN OTTHUMG00000164176.4 475732 7477 267 ENSG00000221986.5 MYBPHL chr1 109292365 109307041 - protein_coding KNOWN OTTHUMG00000012002.1 14677 1789 17 ENSG00000253330.1 RP11-697N18.3 chr8 47511034 47512141 - processed_pseudogene KNOWN OTTHUMG00000164177.1 1108 1108 1 ENSG00000269924.1 RP11-697N18.4 chr8 47527397 47528148 + sense_intronic NOVEL OTTHUMG00000183975.1 752 752 1 ENSG00000251354.3 RP11-697N18.1 chr8 47546804 47547926 - unprocessed_pseudogene KNOWN OTTHUMG00000160450.3 1123 779 2 ENSG00000254065.1 RP11-697N18.2 chr8 47592147 47592609 - processed_pseudogene KNOWN OTTHUMG00000164178.1 463 463 1 ENSG00000207369.1 RNU6-665P chr8 47667771 47667877 + snRNA KNOWN NA 107 107 1 ENSG00000221869.4 CEBPD chr8 47736909 47739086 - protein_coding KNOWN OTTHUMG00000162290.2 2178 2178 1 ENSG00000253729.6 PRKDC chr8 47773108 47960183 - protein_coding KNOWN OTTHUMG00000164239.5 187076 15417 201 ENSG00000207450.1 Y_RNA chr8 47805079 47805179 - misc_RNA NOVEL NA 101 101 1 ENSG00000211562.2 AC103686.1 chr8 47890058 47890130 + miRNA NOVEL NA 73 73 1 ENSG00000104738.15 MCM4 chr8 47960185 47978160 + protein_coding KNOWN OTTHUMG00000164205.3 17976 6824 83 ENSG00000134243.10 SORT1 chr1 109309568 109397951 - protein_coding KNOWN OTTHUMG00000011999.2 88384 8762 64 ENSG00000222522.1 RNU6-519P chr8 47979414 47979521 + snRNA KNOWN NA 108 108 1 ENSG00000169139.10 UBE2V2 chr8 48008400 48064708 + protein_coding KNOWN OTTHUMG00000164206.5 56309 6606 30 ENSG00000253843.1 RP11-769N21.2 chr8 48193850 48194627 - processed_pseudogene KNOWN OTTHUMG00000164241.1 778 778 1 ENSG00000253654.2 CTD-2210A23.1 chr8 48294026 48294694 - processed_pseudogene KNOWN OTTHUMG00000164242.2 669 669 1 ENSG00000252710.1 RNU6-295P chr8 48307927 48308030 - snRNA KNOWN NA 104 104 1 ENSG00000277418.1 5S_rRNA chr8 48316669 48316770 + rRNA NOVEL NA 102 102 1 ENSG00000224594.2 RPL29P19 chr8 48384590 48385049 + processed_pseudogene KNOWN OTTHUMG00000155292.2 460 460 1 ENSG00000279881.1 RP11-513O13.1 chr8 48428143 48431041 - TEC KNOWN OTTHUMG00000173473.1 2899 2899 1 ENSG00000253140.1 RP11-567J20.3 chr8 48515852 48517089 - lincRNA NOVEL OTTHUMG00000164197.1 1238 537 2 ENSG00000253608.1 RP11-770E5.1 chr8 48551567 48698510 + antisense NOVEL OTTHUMG00000164198.1 146944 2372 4 ENSG00000143106.11 PSMA5 chr1 109399031 109426427 - protein_coding KNOWN OTTHUMG00000012001.2 27397 5724 35 ENSG00000253688.1 RP11-567J20.2 chr8 48552015 48556441 - lincRNA NOVEL OTTHUMG00000164199.1 4427 764 2 ENSG00000233858.4 AC026904.1 chr8 48590401 48594621 + lincRNA NOVEL OTTHUMG00000141277.1 4221 3549 2 ENSG00000253702.1 RP11-567J20.1 chr8 48597458 48621018 - lincRNA NOVEL OTTHUMG00000164200.1 23561 559 4 ENSG00000253455.1 RP11-770E5.3 chr8 48620465 48623895 + lincRNA NOVEL OTTHUMG00000164201.1 3431 289 2 ENSG00000253892.1 RP11-770E5.2 chr8 48657260 48658894 - lincRNA NOVEL OTTHUMG00000164202.1 1635 594 2 ENSG00000034239.9 EFCAB1 chr8 48710789 48735311 - protein_coding KNOWN OTTHUMG00000164203.3 24523 5805 44 ENSG00000233109.4 RP11-22C8.1 chr8 48913916 48914380 + processed_pseudogene KNOWN OTTHUMG00000164215.1 465 465 1 ENSG00000019549.7 SNAI2 chr8 48917690 48921740 - protein_coding KNOWN OTTHUMG00000149912.3 4051 2282 7 ENSG00000275096.1 AC013701.1 chr8 48938840 48938934 + miRNA NOVEL NA 95 95 1 ENSG00000168333.12 C8orf22 chr8 49054311 49076090 + protein_coding KNOWN OTTHUMG00000164217.2 21780 2059 20 ENSG00000143028.8 SYPL2 chr1 109466628 109482137 + protein_coding KNOWN OTTHUMG00000010969.1 15510 3963 8 ENSG00000253474.1 RP11-10H3.1 chr8 49168539 49228925 + lincRNA NOVEL OTTHUMG00000164208.1 60387 922 7 ENSG00000199640.1 RN7SKP294 chr8 49330210 49330547 + misc_RNA KNOWN NA 338 338 1 ENSG00000254268.1 RFPL4AP7 chr8 49352630 49352844 - processed_pseudogene KNOWN OTTHUMG00000164209.1 215 215 1 ENSG00000253380.1 RP11-738G5.1 chr8 49496763 49512180 - lincRNA NOVEL OTTHUMG00000164210.1 15418 267 2 ENSG00000253206.1 RP11-738G5.2 chr8 49536386 49554414 - lincRNA NOVEL OTTHUMG00000164211.1 18029 407 4 ENSG00000253810.1 PSAT1P1 chr8 49740216 49741321 - processed_pseudogene KNOWN OTTHUMG00000164212.1 1106 1106 1 ENSG00000253484.1 RP11-109P6.2 chr8 49817586 49820944 - lincRNA NOVEL OTTHUMG00000164213.1 3359 412 3 ENSG00000271148.1 RP11-401N18.1 chr8 49906863 49907446 - lincRNA NOVEL OTTHUMG00000184920.1 584 584 1 ENSG00000147481.12 SNTG1 chr8 49909789 50794118 + protein_coding KNOWN OTTHUMG00000164257.1 884330 5099 129 ENSG00000253849.1 RP11-759A9.1 chr8 50381015 50382275 + sense_intronic NOVEL OTTHUMG00000164258.1 1261 434 2 ENSG00000041988.14 THAP3 chr1 6624866 6635586 + protein_coding KNOWN OTTHUMG00000001440.3 10721 4072 34 ENSG00000162650.14 ATXN7L2 chr1 109483479 109492804 + protein_coding KNOWN OTTHUMG00000011027.2 9326 5232 54 ENSG00000254392.1 RP11-759A9.2 chr8 50490795 50491465 + processed_pseudogene KNOWN OTTHUMG00000164259.1 671 671 1 ENSG00000254358.1 CYCSP22 chr8 50762460 50762798 - processed_pseudogene KNOWN OTTHUMG00000164260.1 339 339 1 ENSG00000253340.1 RP11-139G7.1 chr8 50859530 50860062 + processed_pseudogene KNOWN OTTHUMG00000164261.2 533 533 1 ENSG00000201316.1 SNORA7 chr8 51015021 51015165 + snoRNA NOVEL NA 145 145 1 ENSG00000253664.1 RP11-401H2.1 chr8 51257688 51321118 + antisense NOVEL OTTHUMG00000164243.1 63431 519 2 ENSG00000147485.11 PXDNL chr8 51319578 51809445 - protein_coding KNOWN OTTHUMG00000164244.1 489868 5238 37 ENSG00000254025.1 RP11-119N19.1 chr8 51435602 51436509 + processed_pseudogene KNOWN OTTHUMG00000164863.1 908 908 1 ENSG00000254225.1 RP11-11C20.1 chr8 51721670 51722164 - processed_pseudogene KNOWN OTTHUMG00000164245.1 495 495 1 ENSG00000272076.1 RP11-11C20.3 chr8 51810110 51810681 - lincRNA NOVEL OTTHUMG00000185455.1 572 572 1 ENSG00000168300.12 PCMTD1 chr8 51817575 51899186 - protein_coding KNOWN OTTHUMG00000164246.2 81612 7323 34 ENSG00000174151.13 CYB561D1 chr1 109494052 109502932 + protein_coding KNOWN OTTHUMG00000011051.6 8881 5690 28 ENSG00000253475.1 RP11-110G21.2 chr8 51895957 51896374 - sense_intronic NOVEL OTTHUMG00000164254.1 418 283 2 ENSG00000228801.5 RP11-110G21.1 chr8 51899325 51947173 + antisense NOVEL OTTHUMG00000164247.2 47849 2055 9 ENSG00000272024.1 RP11-546K22.3 chr8 51950284 51950690 + lincRNA NOVEL OTTHUMG00000185456.1 407 407 1 ENSG00000253844.1 RP11-546K22.1 chr8 51961458 52022974 + lincRNA NOVEL OTTHUMG00000164266.1 61517 672 2 ENSG00000254136.1 RP11-546K22.2 chr8 51996210 52008355 - lincRNA NOVEL OTTHUMG00000164267.1 12146 470 2 ENSG00000147488.10 ST18 chr8 52110839 52460959 - protein_coding KNOWN OTTHUMG00000164233.2 350121 14396 193 ENSG00000254314.1 RP11-26M5.3 chr8 52150820 52154892 + antisense NOVEL OTTHUMG00000164250.1 4073 635 2 ENSG00000253551.1 RP11-26M5.2 chr8 52194362 52199580 + antisense NOVEL OTTHUMG00000164251.1 5219 824 2 ENSG00000253924.1 RP11-1023P17.2 chr8 52294455 52301942 + lincRNA NOVEL OTTHUMG00000164252.1 7488 422 3 ENSG00000240534.1 RPL34P17 chr8 52313154 52313500 - processed_pseudogene KNOWN OTTHUMG00000158611.2 347 347 1 ENSG00000181754.6 AMIGO1 chr1 109504175 109509738 - protein_coding KNOWN OTTHUMG00000011653.1 5564 5144 4 ENSG00000196711.7 FAM150A chr8 52534037 52565507 - protein_coding KNOWN OTTHUMG00000164256.1 31471 1217 9 ENSG00000023287.11 RB1CC1 chr8 52622456 52745843 - protein_coding KNOWN OTTHUMG00000164268.4 123388 7615 86 ENSG00000271555.1 CTD-3214K23.1 chr8 52722903 52723141 + sense_intronic NOVEL OTTHUMG00000185152.1 239 239 1 ENSG00000281352.1 AC087348.1 chr8 52891846 52891976 - miRNA NOVEL NA 131 131 1 ENSG00000183729.3 NPBWR1 chr8 52938431 52941117 + protein_coding KNOWN OTTHUMG00000164275.1 2687 2687 1 ENSG00000248911.2 RP11-182E14.1 chr8 52975111 52976116 - processed_pseudogene KNOWN OTTHUMG00000160451.2 1006 1006 1 ENSG00000265835.2 AC009800.1 chr8 52995348 52995458 - miRNA NOVEL NA 111 111 1 ENSG00000251871.1 AC016113.1 chr8 53037629 53037749 - miRNA NOVEL NA 121 121 1 ENSG00000250494.1 RP11-162D9.1 chr8 53162339 53162987 + processed_pseudogene KNOWN OTTHUMG00000160418.1 649 318 2 ENSG00000254687.1 RP11-162D9.3 chr8 53177571 53242683 + antisense NOVEL OTTHUMG00000165220.1 65113 842 5 ENSG00000156097.11 GPR61 chr1 109539872 109548406 + protein_coding KNOWN OTTHUMG00000011633.4 8535 5057 21 ENSG00000082556.9 OPRK1 chr8 53225716 53251697 - protein_coding KNOWN OTTHUMG00000164276.1 25982 5738 24 ENSG00000260484.1 RP11-1081M5.2 chr8 53388701 53390872 - lincRNA NOVEL OTTHUMG00000174462.1 2172 2172 1 ENSG00000274295.1 RP11-1081M5.3 chr8 53394215 53394795 + processed_pseudogene KNOWN OTTHUMG00000187714.1 581 581 1 ENSG00000253369.1 RP11-1081M5.1 chr8 53395211 53395946 - lincRNA NOVEL OTTHUMG00000164263.1 736 594 2 ENSG00000254204.1 RP11-400K9.3 chr8 53515170 53515905 + lincRNA NOVEL OTTHUMG00000164229.1 736 469 2 ENSG00000237807.3 RP11-400K9.4 chr8 53515171 53523931 - lincRNA NOVEL OTTHUMG00000164264.1 8761 2387 2 ENSG00000240919.1 RP11-400K9.1 chr8 53532908 53533704 + processed_pseudogene KNOWN OTTHUMG00000158612.1 797 478 2 ENSG00000206144.5 RP11-400K9.2 chr8 53537060 53540300 + processed_pseudogene KNOWN OTTHUMG00000160523.2 3241 2156 2 ENSG00000253668.1 RP11-463C14.1 chr8 53712697 53712896 + processed_pseudogene KNOWN OTTHUMG00000164230.1 200 200 1 ENSG00000047249.15 ATP6V1H chr8 53715557 53843558 - protein_coding KNOWN OTTHUMG00000164231.6 128002 5090 121 ENSG00000254942.1 RP5-1160K1.8 chr1 109539906 109543837 - antisense NOVEL OTTHUMG00000165650.1 3932 582 2 ENSG00000147509.12 RGS20 chr8 53851808 53959303 + protein_coding KNOWN OTTHUMG00000164750.2 107496 3192 41 ENSG00000272457.1 RP11-1070A24.2 chr8 53876150 53876649 - antisense NOVEL OTTHUMG00000185457.1 500 500 1 ENSG00000244159.1 RP11-1070A24.1 chr8 53887008 53887244 - processed_pseudogene KNOWN OTTHUMG00000158613.1 237 237 1 ENSG00000200528.1 RNU6-1331P chr8 53914719 53914824 + snRNA KNOWN NA 106 106 1 ENSG00000187735.11 TCEA1 chr8 53966552 54022529 - protein_coding KNOWN OTTHUMG00000164262.2 55978 4391 68 ENSG00000253667.2 RP11-30L15.4 chr8 53971231 53974210 + processed_pseudogene KNOWN OTTHUMG00000164312.2 2980 2479 3 ENSG00000280473.1 AC100821.2 chr8 53993605 53994438 + protein_coding NOVEL NA 834 60 3 ENSG00000260955.2 RP11-30L15.6 chr8 54042989 54045629 - lincRNA NOVEL OTTHUMG00000172758.2 2641 440 3 ENSG00000120992.16 LYPLA1 chr8 54046367 54102017 - protein_coding KNOWN OTTHUMG00000164313.4 55651 4694 93 ENSG00000276621.1 AC100821.1 chr8 54066681 54066781 + miRNA NOVEL NA 101 101 1 ENSG00000065135.8 GNAI3 chr1 109548611 109618321 + protein_coding KNOWN OTTHUMG00000189112.1 69711 27174 9 ENSG00000254274.1 TDGF1P5 chr8 54073114 54073566 + processed_pseudogene KNOWN OTTHUMG00000164314.2 453 453 1 ENSG00000276353.1 Metazoa_SRP chr8 54130582 54130860 + misc_RNA NOVEL NA 279 279 1 ENSG00000137547.7 MRPL15 chr8 54135210 54147901 + protein_coding KNOWN OTTHUMG00000164315.3 12692 1191 14 ENSG00000251835.1 RNU6ATAC32P chr8 54152807 54152882 - snRNA KNOWN NA 76 76 1 ENSG00000270980.1 RP11-626A5.2 chr8 54191582 54192035 - processed_pseudogene KNOWN OTTHUMG00000184843.1 454 454 1 ENSG00000253840.1 RP11-767C6.1 chr8 54247633 54247906 + processed_pseudogene KNOWN OTTHUMG00000164376.1 274 274 1 ENSG00000199212.1 RNU105C chr8 54330687 54330895 + snoRNA KNOWN NA 209 209 1 ENSG00000276605.1 RP11-793H4.1 chr8 54354168 54355118 + processed_pseudogene KNOWN OTTHUMG00000187718.1 951 951 1 ENSG00000244107.3 RN7SL250P chr8 54420468 54420725 + misc_RNA KNOWN NA 258 258 1 ENSG00000164736.5 SOX17 chr8 54457935 54460888 + protein_coding KNOWN OTTHUMG00000164377.2 2954 2342 2 ENSG00000206832.1 RNU6V chr1 109591534 109591640 - snRNA KNOWN NA 107 107 1 ENSG00000274310.1 RP11-53M11.5 chr8 54467208 54470609 + unprocessed_pseudogene KNOWN OTTHUMG00000187722.1 3402 619 2 ENSG00000270275.1 TRMT112P7 chr8 54479597 54479963 - processed_pseudogene KNOWN OTTHUMG00000184845.1 367 367 1 ENSG00000226098.4 SEC11B chr8 54522799 54523297 - processed_pseudogene KNOWN OTTHUMG00000164378.1 499 499 1 ENSG00000254142.2 RP11-53M11.3 chr8 54554361 54561927 + lincRNA NOVEL OTTHUMG00000164451.2 7567 1100 11 ENSG00000104237.6 RP1 chr8 54616067 54630834 + protein_coding KNOWN OTTHUMG00000164379.3 14768 7100 4 ENSG00000254608.1 RP11-56A10.1 chr8 54648993 54869903 + unprocessed_pseudogene KNOWN OTTHUMG00000166161.1 220911 1014 9 ENSG00000253114.2 RP11-550I15.1 chr8 54696398 54697127 + processed_pseudogene KNOWN OTTHUMG00000164380.3 730 730 1 ENSG00000206579.8 XKR4 chr8 55102389 55542054 + protein_coding KNOWN OTTHUMG00000164288.2 439666 19885 9 ENSG00000253976.1 RP11-386G21.1 chr8 55135203 55142358 - lincRNA NOVEL OTTHUMG00000164289.1 7156 813 3 ENSG00000253857.1 RP11-386G21.2 chr8 55161483 55164727 + lincRNA NOVEL OTTHUMG00000164290.1 3245 772 4 ENSG00000225113.1 RP5-1160K1.3 chr1 109596225 109597781 + sense_overlapping NOVEL OTTHUMG00000011648.3 1557 596 2 ENSG00000248522.1 SBF1P1 chr8 55449509 55455139 - processed_pseudogene KNOWN OTTHUMG00000160453.2 5631 5631 1 ENSG00000254357.1 RP11-628E19.2 chr8 55517240 55520977 - antisense NOVEL OTTHUMG00000164291.1 3738 590 2 ENSG00000221589.1 AC100817.1 chr8 55677233 55677324 - miRNA NOVEL NA 92 92 1 ENSG00000167904.13 TMEM68 chr8 55696424 55773407 - protein_coding KNOWN OTTHUMG00000164293.2 76984 8574 85 ENSG00000222955.1 RNA5SP265 chr8 55745232 55745342 + rRNA KNOWN NA 111 111 1 ENSG00000137574.9 TGS1 chr8 55773142 55825448 + protein_coding KNOWN OTTHUMG00000164294.1 52307 3869 28 ENSG00000254087.6 LYN chr8 55879813 56014168 + protein_coding KNOWN OTTHUMG00000044345.4 134356 6185 36 ENSG00000254325.2 RP11-318K15.2 chr8 55893595 55895739 + sense_intronic NOVEL OTTHUMG00000164295.2 2145 673 2 ENSG00000199405.1 SNORA1 chr8 55902723 55902855 - snoRNA NOVEL NA 133 133 1 ENSG00000240905.3 RN7SL798P chr8 55980240 55980540 - misc_RNA KNOWN NA 301 301 1 ENSG00000207709.2 MIR197 chr1 109598893 109598967 + miRNA KNOWN NA 75 75 1 ENSG00000241997.3 RN7SL323P chr8 56022019 56022313 - misc_RNA KNOWN NA 295 295 1 ENSG00000280728.1 AC046176.1 chr8 56042371 56042458 + miRNA NOVEL NA 88 88 1 ENSG00000236814.1 RP11-446E9.1 chr8 56050038 56051207 - processed_pseudogene KNOWN OTTHUMG00000164296.1 1170 1170 1 ENSG00000008988.8 RPS20 chr8 56067295 56074581 - protein_coding KNOWN OTTHUMG00000164297.1 7287 3002 42 ENSG00000238650.1 SNORD54 chr8 56073835 56073901 - snoRNA KNOWN NA 67 67 1 ENSG00000253603.1 CTA-397H3.3 chr8 56074592 56075274 + antisense NOVEL OTTHUMG00000164298.1 683 557 2 ENSG00000248578.1 NPM1P21 chr8 56101199 56102267 - processed_pseudogene KNOWN OTTHUMG00000160268.1 1069 762 2 ENSG00000172680.1 MOS chr8 56112942 56113982 - protein_coding KNOWN OTTHUMG00000164299.1 1041 1041 1 ENSG00000221093.1 SNORA3 chr8 56121242 56121352 - snoRNA NOVEL NA 111 111 1 ENSG00000181690.6 PLAG1 chr8 56160904 56211324 - protein_coding KNOWN OTTHUMG00000164310.1 50421 7833 17 ENSG00000134183.10 GNAT2 chr1 109603267 109619929 - protein_coding KNOWN OTTHUMG00000011639.2 16663 1381 13 ENSG00000170791.16 CHCHD7 chr8 56211686 56218798 + protein_coding KNOWN OTTHUMG00000074081.3 7113 5866 75 ENSG00000272343.1 RP11-140I16.3 chr8 56222688 56223173 + lincRNA NOVEL OTTHUMG00000185466.1 486 486 1 ENSG00000254216.1 RP11-140I16.2 chr8 56252960 56253372 - processed_pseudogene KNOWN OTTHUMG00000164407.1 413 376 2 ENSG00000170786.11 SDR16C5 chr8 56300010 56320776 - protein_coding KNOWN OTTHUMG00000164311.1 20767 3279 21 ENSG00000253542.6 SDR16C6P chr8 56373064 56395365 - unitary_pseudogene KNOWN OTTHUMG00000164408.4 22302 1086 11 ENSG00000181195.9 PENK chr8 56436674 56446734 - protein_coding KNOWN OTTHUMG00000164409.1 10061 3455 24 ENSG00000254254.4 RP11-17A4.2 chr8 56445807 56552067 + antisense NOVEL OTTHUMG00000164410.1 106261 3078 8 ENSG00000253541.1 SEPT10P1 chr8 56476826 56477987 - processed_pseudogene KNOWN OTTHUMG00000164411.1 1162 1162 1 ENSG00000246430.5 LINC00968 chr8 56496246 56559823 - lincRNA NOVEL OTTHUMG00000164412.1 63578 2840 18 ENSG00000253139.1 RP11-17A4.3 chr8 56536758 56540497 - lincRNA NOVEL OTTHUMG00000164413.1 3740 861 5 ENSG00000007923.14 DNAJC11 chr1 6634168 6701924 - protein_coding KNOWN OTTHUMG00000001443.3 67757 5083 85 ENSG00000116337.14 AMPD2 chr1 109616104 109632051 + protein_coding KNOWN OTTHUMG00000011649.4 15948 6823 204 ENSG00000241431.1 RPL37P6 chr8 56588385 56588787 + transcribed_processed_pseudogene KNOWN OTTHUMG00000158614.1 403 403 2 ENSG00000254055.1 RP11-17A4.4 chr8 56639901 56656465 - lincRNA NOVEL OTTHUMG00000164414.1 16565 584 4 ENSG00000270328.1 RP11-33E15.1 chr8 56776283 56776874 + processed_pseudogene KNOWN OTTHUMG00000184698.1 592 592 1 ENSG00000206975.1 RNU6-13P chr8 56917084 56917190 + snRNA KNOWN NA 107 107 1 ENSG00000104331.7 IMPAD1 chr8 56957933 56993844 - protein_coding KNOWN OTTHUMG00000164415.1 35912 7594 13 ENSG00000222205.1 RNA5SP266 chr8 57126655 57126762 - rRNA KNOWN NA 108 108 1 ENSG00000253301.4 RP11-513O17.2 chr8 57142689 57240298 + lincRNA NOVEL OTTHUMG00000164416.1 97610 4218 38 ENSG00000220984.1 AC025674.1 chr8 57183634 57183720 + miRNA NOVEL NA 87 87 1 ENSG00000251142.1 RP11-513O17.1 chr8 57240057 57240541 + processed_pseudogene KNOWN OTTHUMG00000160419.1 485 324 2 ENSG00000253614.1 RP11-513O17.3 chr8 57261226 57266613 + lincRNA NOVEL OTTHUMG00000164423.1 5388 2971 3 ENSG00000228703.1 RP5-1160K1.6 chr1 109628417 109630305 - antisense NOVEL OTTHUMG00000011645.1 1889 688 3 ENSG00000215117.5 LINC00588 chr8 57279543 57284731 + lincRNA KNOWN OTTHUMG00000164424.1 5189 1875 4 ENSG00000202265.1 RNU6-596P chr8 57289552 57289649 + snRNA KNOWN NA 98 98 1 ENSG00000253871.1 RP11-756K15.2 chr8 57343787 57364857 + lincRNA NOVEL OTTHUMG00000164271.1 21071 1865 12 ENSG00000243050.1 RPL30P10 chr8 57392546 57392882 + processed_pseudogene KNOWN OTTHUMG00000158615.2 337 337 1 ENSG00000253821.1 RP11-246K15.1 chr8 57492884 57591559 + lincRNA NOVEL OTTHUMG00000164272.1 98676 647 4 ENSG00000253322.1 RP11-388G22.1 chr8 57594166 57805029 - lincRNA NOVEL OTTHUMG00000164273.1 210864 570 3 ENSG00000254139.1 CTD-2339F6.1 chr8 57746149 57750199 + lincRNA NOVEL OTTHUMG00000164274.1 4051 2461 2 ENSG00000253376.1 RP11-44D19.1 chr8 57889576 57890809 - lincRNA NOVEL OTTHUMG00000164280.1 1234 780 2 ENSG00000205293.3 RP11-1112C15.1 chr8 57978358 57984126 + lincRNA NOVEL OTTHUMG00000164281.1 5769 2109 3 ENSG00000169122.10 FAM110B chr8 57994509 58204279 + protein_coding KNOWN OTTHUMG00000164282.2 209771 4943 28 ENSG00000235045.2 RPL7P8 chr1 109651370 109652099 + processed_pseudogene KNOWN OTTHUMG00000011636.2 730 730 1 ENSG00000253523.1 RP11-1112C15.2 chr8 58031334 58032682 - lincRNA NOVEL OTTHUMG00000164283.1 1349 877 2 ENSG00000253116.1 RP11-648L3.2 chr8 58091442 58106294 - lincRNA NOVEL OTTHUMG00000164284.1 14853 625 4 ENSG00000242595.1 RP11-648L3.1 chr8 58113189 58113622 - processed_pseudogene KNOWN OTTHUMG00000158617.1 434 434 1 ENSG00000253281.5 RP11-716D16.1 chr8 58255771 58272119 - processed_transcript NOVEL OTTHUMG00000164285.2 16349 1725 15 ENSG00000215114.6 UBXN2B chr8 58411264 58451501 + protein_coding KNOWN OTTHUMG00000164300.1 40238 5390 35 ENSG00000250031.1 RP11-114M5.1 chr8 58424588 58426685 - processed_pseudogene KNOWN OTTHUMG00000160264.1 2098 1779 2 ENSG00000167910.3 CYP7A1 chr8 58490178 58500236 - protein_coding KNOWN OTTHUMG00000164301.1 10059 2950 6 ENSG00000254103.1 RP11-114M5.3 chr8 58503588 58504068 + processed_pseudogene KNOWN OTTHUMG00000164302.1 481 481 1 ENSG00000137575.10 SDCBP chr8 58552924 58582860 + protein_coding KNOWN OTTHUMG00000164303.2 29937 4778 90 ENSG00000035681.6 NSMAF chr8 58583504 58659844 - protein_coding KNOWN OTTHUMG00000164352.3 76341 6165 144 ENSG00000168765.14 GSTM4 chr1 109656081 109674836 + protein_coding KNOWN OTTHUMG00000011642.1 18756 5460 67 ENSG00000242970.2 AC068522.4 chr8 58588420 58588764 - processed_pseudogene KNOWN OTTHUMG00000164304.1 345 345 1 ENSG00000198846.5 TOX chr8 58805418 59119208 - protein_coding KNOWN OTTHUMG00000164331.2 313791 4131 9 ENSG00000201231.1 RNU4-50P chr8 58814412 58814552 - snRNA KNOWN NA 141 141 1 ENSG00000254048.1 RP11-328K2.1 chr8 58991720 58992938 - sense_intronic NOVEL OTTHUMG00000164332.1 1219 551 2 ENSG00000167912.5 RP11-25K19.1 chr8 59119040 59121346 + antisense NOVEL OTTHUMG00000164333.1 2307 1743 6 ENSG00000206853.1 SNORA51 chr8 59137372 59137502 - snoRNA NOVEL NA 131 131 1 ENSG00000201763.1 RNA5SP267 chr8 59455885 59456010 + rRNA KNOWN NA 126 126 1 ENSG00000254150.1 RP11-379I19.2 chr8 59557528 59557855 - processed_pseudogene KNOWN OTTHUMG00000164305.1 328 328 1 ENSG00000253260.1 RP11-379I19.1 chr8 59561327 59593701 - lincRNA NOVEL OTTHUMG00000164306.1 32375 358 2 ENSG00000253879.1 RP11-379I19.3 chr8 59601378 59613775 + lincRNA NOVEL OTTHUMG00000164307.1 12398 1017 5 ENSG00000213366.11 GSTM2 chr1 109668022 109709551 + protein_coding KNOWN OTTHUMG00000011638.6 41530 9116 90 ENSG00000253413.1 RP11-960H2.2 chr8 59760047 59760263 + processed_pseudogene KNOWN OTTHUMG00000164308.1 217 217 1 ENSG00000253723.1 RP11-960H2.1 chr8 59821124 59821433 + processed_pseudogene KNOWN OTTHUMG00000164309.2 310 310 1 ENSG00000278428.1 RP11-88H1.1 chr8 59893856 59893942 - unprocessed_pseudogene KNOWN OTTHUMG00000187724.1 87 87 1 ENSG00000254775.1 RP11-27P7.1 chr8 60049587 60074715 + lincRNA NOVEL OTTHUMG00000165323.1 25129 433 3 ENSG00000254954.1 SLC2A13P1 chr8 60141821 60142142 + processed_pseudogene KNOWN OTTHUMG00000165324.1 322 322 1 ENSG00000178538.8 CA8 chr8 60187347 60281412 - protein_coding KNOWN OTTHUMG00000165325.1 94066 5783 25 ENSG00000251396.5 LINC01301 chr8 60384588 60516795 - lincRNA NOVEL OTTHUMG00000165326.1 132208 4428 21 ENSG00000226301.3 PDCL3P1 chr8 60387262 60387995 + processed_pseudogene KNOWN OTTHUMG00000165327.1 734 734 1 ENSG00000104388.13 RAB2A chr8 60516857 60623627 + protein_coding KNOWN OTTHUMG00000134298.2 106771 5654 63 ENSG00000255321.1 RP11-91I20.4 chr8 60551957 60553036 - antisense NOVEL OTTHUMG00000165328.1 1080 689 2 ENSG00000134184.11 GSTM1 chr1 109687814 109709039 + protein_coding KNOWN OTTHUMG00000011635.3 21226 2512 47 ENSG00000228862.3 RP11-91I20.3 chr8 60631509 60636271 - lincRNA NOVEL OTTHUMG00000165329.1 4763 3786 4 ENSG00000254869.1 RP11-91I20.2 chr8 60652502 60653561 - lincRNA NOVEL OTTHUMG00000165330.1 1060 430 3 ENSG00000255289.1 RP11-91I20.1 chr8 60660820 60664530 + lincRNA NOVEL OTTHUMG00000165331.1 3711 529 2 ENSG00000171316.10 CHD7 chr8 60678778 60868028 + protein_coding KNOWN OTTHUMG00000165332.3 189251 16982 80 ENSG00000254432.1 RP11-33I11.2 chr8 60808735 60809606 - antisense NOVEL OTTHUMG00000165333.1 872 301 2 ENSG00000271377.1 RP11-33I11.3 chr8 60906059 60906452 + processed_pseudogene KNOWN OTTHUMG00000184688.1 394 394 1 ENSG00000254777.4 AC022182.1 chr8 60910053 60966557 + lincRNA NOVEL OTTHUMG00000165334.1 56505 1363 13 ENSG00000255397.1 AC022182.2 chr8 60937705 60939871 - processed_pseudogene KNOWN OTTHUMG00000165335.1 2167 2167 1 ENSG00000254802.1 AC022182.3 chr8 60965802 60967775 - lincRNA NOVEL OTTHUMG00000165336.1 1974 859 2 ENSG00000177182.9 CLVS1 chr8 61057158 61501645 + protein_coding KNOWN OTTHUMG00000164334.5 444488 7393 42 ENSG00000260246.1 AC000032.2 chr1 109693117 109693742 - antisense NOVEL OTTHUMG00000172930.1 626 491 2 ENSG00000213881.3 NPM1P6 chr8 61202350 61203220 + processed_pseudogene KNOWN OTTHUMG00000164349.1 871 871 1 ENSG00000254222.1 RP11-787D18.2 chr8 61264624 61292039 - antisense NOVEL OTTHUMG00000164350.1 27416 387 3 ENSG00000253711.1 RP11-787D18.1 chr8 61300164 61301069 - antisense NOVEL OTTHUMG00000164351.1 906 680 4 ENSG00000198363.14 ASPH chr8 61500556 61714640 - protein_coding KNOWN OTTHUMG00000164375.10 214085 20047 263 ENSG00000254285.3 KRT8P3 chr8 61578220 61579668 + processed_pseudogene KNOWN OTTHUMG00000164401.1 1449 1449 1 ENSG00000222898.1 RN7SKP97 chr8 61631680 61632012 - misc_RNA KNOWN NA 333 333 1 ENSG00000264408.1 MIR4470 chr8 61714788 61714859 + miRNA KNOWN NA 72 72 1 ENSG00000251127.2 RP11-280G9.1 chr8 61759094 61765969 - lincRNA NOVEL OTTHUMG00000164337.1 6876 2750 2 ENSG00000254119.4 RP11-705O24.1 chr8 61785047 61944180 + lincRNA NOVEL OTTHUMG00000164339.2 159134 3155 37 ENSG00000253834.1 RP11-705O24.3 chr8 61821481 61825252 - lincRNA NOVEL OTTHUMG00000164338.1 3772 606 2 ENSG00000134201.9 GSTM5 chr1 109712255 109775428 + protein_coding KNOWN OTTHUMG00000011644.2 63174 6013 29 ENSG00000254120.1 RP11-705O24.2 chr8 61889839 61894206 + lincRNA NOVEL OTTHUMG00000164340.1 4368 407 4 ENSG00000253544.1 RP11-705O24.4 chr8 61909984 61910802 - processed_pseudogene KNOWN OTTHUMG00000164341.1 819 819 1 ENSG00000253789.1 NARSP2 chr8 62110524 62119898 + transcribed_processed_pseudogene KNOWN OTTHUMG00000164342.2 9375 983 4 ENSG00000237810.3 CTD-2571E19.3 chr8 62143311 62144769 - processed_pseudogene KNOWN OTTHUMG00000164344.1 1459 1459 1 ENSG00000185942.10 NKAIN3 chr8 62248591 62999652 + protein_coding KNOWN OTTHUMG00000164361.3 751062 2924 23 ENSG00000254050.1 RP11-577N1.1 chr8 62473217 62474269 - antisense NOVEL OTTHUMG00000164345.1 1053 513 2 ENSG00000253975.1 RP11-577N1.2 chr8 62482198 62483811 - processed_pseudogene KNOWN OTTHUMG00000164346.1 1614 1614 1 ENSG00000253517.1 XRCC6P4 chr8 62855068 62857134 - processed_pseudogene KNOWN OTTHUMG00000164362.1 2067 2067 1 ENSG00000253431.1 SRPK2P chr8 62863082 62864181 - processed_pseudogene KNOWN OTTHUMG00000164363.1 1100 1100 1 ENSG00000274956.2 UG0898H09 chr8 62977861 62984900 + lincRNA NOVEL OTTHUMG00000189279.1 7040 7040 2 ENSG00000241720.2 RP4-735C1.4 chr1 109725820 109775252 + antisense NOVEL OTTHUMG00000011632.1 49433 808 4 ENSG00000240915.2 RP11-659E9.2 chr8 63013068 63014681 + antisense NOVEL OTTHUMG00000164364.1 1614 550 2 ENSG00000137563.10 GGH chr8 63015079 63039171 - protein_coding KNOWN OTTHUMG00000164365.3 24093 3130 37 ENSG00000253121.1 RP11-659E9.4 chr8 63024372 63025294 + antisense NOVEL OTTHUMG00000164366.1 923 667 2 ENSG00000137561.4 TTPA chr8 63048553 63086053 - protein_coding KNOWN OTTHUMG00000164367.2 37501 2389 7 ENSG00000253555.1 RP11-16E18.1 chr8 63136223 63138084 - unprocessed_pseudogene KNOWN OTTHUMG00000164368.1 1862 1406 2 ENSG00000270673.1 YTHDF3-AS1 chr8 63167725 63168442 - lincRNA NOVEL OTTHUMG00000185282.1 718 718 1 ENSG00000185728.15 YTHDF3 chr8 63168553 63212786 + protein_coding KNOWN OTTHUMG00000164369.13 44234 6163 71 ENSG00000261542.1 RP11-16E18.3 chr8 63215981 63218034 + lincRNA NOVEL OTTHUMG00000173254.1 2054 2054 1 ENSG00000241964.3 RN7SL135P chr8 63234634 63234911 - misc_RNA KNOWN NA 278 278 1 ENSG00000253205.4 CTD-3046C4.1 chr8 63384839 63470205 - lincRNA NOVEL OTTHUMG00000164394.1 85367 2927 21 ENSG00000134202.9 GSTM3 chr1 109733932 109741038 - protein_coding KNOWN OTTHUMG00000011640.2 7107 4750 49 ENSG00000215096.3 IFITM8P chr8 63409064 63409457 + processed_pseudogene KNOWN OTTHUMG00000164395.1 394 394 1 ENSG00000253894.1 RP11-45K10.2 chr8 63465849 63475482 + lincRNA NOVEL OTTHUMG00000164396.1 9634 3795 9 ENSG00000253583.1 RP11-573J24.1 chr8 63586000 63589408 + lincRNA NOVEL OTTHUMG00000164397.1 3409 730 3 ENSG00000252358.1 RN7SKP135 chr8 63609354 63609600 - misc_RNA KNOWN NA 247 247 1 ENSG00000253554.4 RP11-32K4.1 chr8 63687179 64368558 - antisense NOVEL OTTHUMG00000164358.2 681380 1598 20 ENSG00000253762.1 RP11-579E24.2 chr8 63704756 63751677 + lincRNA NOVEL OTTHUMG00000164398.1 46922 566 4 ENSG00000253734.1 LINC01289 chr8 63769430 63785501 + lincRNA NOVEL OTTHUMG00000164399.2 16072 3712 3 ENSG00000253231.1 COX6CP8 chr8 64331927 64332152 + processed_pseudogene KNOWN OTTHUMG00000164359.1 226 226 1 ENSG00000254377.4 MIR124-2HG chr8 64373328 64383787 + lincRNA NOVEL OTTHUMG00000164360.2 10460 3486 11 ENSG00000207816.1 MIR124-2 chr8 64379149 64379257 + miRNA KNOWN NA 109 109 1 ENSG00000228750.4 RP11-242F24.1 chr1 6724637 6730012 + lincRNA NOVEL OTTHUMG00000001785.1 5376 2065 6 ENSG00000198758.9 EPS8L3 chr1 109750080 109764027 - protein_coding KNOWN OTTHUMG00000011651.2 13948 3477 89 ENSG00000253750.1 RP11-21C4.4 chr8 64554236 64554475 - processed_pseudogene KNOWN OTTHUMG00000164383.1 240 240 1 ENSG00000253800.1 RP11-21C4.5 chr8 64570913 64571332 - processed_pseudogene KNOWN OTTHUMG00000164384.1 420 420 1 ENSG00000254102.1 RP11-21C4.1 chr8 64574306 64581888 - antisense NOVEL OTTHUMG00000164385.1 7583 2875 4 ENSG00000180828.2 BHLHE22 chr8 64580367 64583628 + protein_coding KNOWN OTTHUMG00000164386.1 3262 3262 1 ENSG00000172817.3 CYP7B1 chr8 64587763 64798761 - protein_coding KNOWN OTTHUMG00000164387.2 210999 2282 11 ENSG00000254330.1 RP11-1D12.1 chr8 64703774 64734459 - sense_intronic NOVEL OTTHUMG00000164388.1 30686 769 5 ENSG00000254006.4 RP11-1D12.2 chr8 64801236 64817573 - lincRNA NOVEL OTTHUMG00000164389.1 16338 877 8 ENSG00000253493.1 RP11-89A16.1 chr8 64973488 64973848 - processed_pseudogene KNOWN OTTHUMG00000164370.1 361 361 1 ENSG00000239261.1 RPL31P41 chr8 65155407 65155778 + processed_pseudogene KNOWN OTTHUMG00000158619.1 372 372 1 ENSG00000280725.1 LINC00251 chr8 65161145 65180341 - lincRNA KNOWN OTTHUMG00000189557.1 19197 1055 4 ENSG00000224927.2 NDUFA5P10 chr1 109810642 109810998 - processed_pseudogene KNOWN OTTHUMG00000011634.2 357 357 1 ENSG00000213873.4 RP11-678D18.1 chr8 65377592 65378111 + processed_pseudogene KNOWN OTTHUMG00000164372.1 520 520 1 ENSG00000254081.1 LINC01299 chr8 65527008 65562780 - lincRNA NOVEL OTTHUMG00000164373.1 35773 2634 5 ENSG00000272010.1 CTD-3025N20.3 chr8 65591850 65592472 - lincRNA NOVEL OTTHUMG00000185471.1 623 623 1 ENSG00000200714.1 Y_RNA chr8 65592731 65592820 + misc_RNA NOVEL NA 90 90 1 ENSG00000104442.8 ARMC1 chr8 65602456 65634217 - protein_coding KNOWN OTTHUMG00000164374.3 31762 3421 32 ENSG00000066855.14 MTFR1 chr8 65644734 65771261 + protein_coding KNOWN OTTHUMG00000164468.5 126528 4629 75 ENSG00000272155.1 RP11-707M3.3 chr8 65714334 65714778 - antisense NOVEL OTTHUMG00000185472.1 445 445 1 ENSG00000205268.9 PDE7A chr8 65717510 65842322 - protein_coding KNOWN OTTHUMG00000164469.2 124813 7425 64 ENSG00000272192.1 CTD-2532N20.1 chr8 65842752 65843331 + lincRNA NOVEL OTTHUMG00000185473.1 580 580 1 ENSG00000147570.8 DNAJC5B chr8 66021560 66100526 + protein_coding KNOWN OTTHUMG00000164470.2 78967 2937 20 ENSG00000228420.1 RP4-735C1.6 chr1 109828355 109871436 + lincRNA NOVEL OTTHUMG00000011637.1 43082 476 4 ENSG00000253190.3 AC084082.3 chr8 66112667 66115207 + lincRNA NOVEL OTTHUMG00000164472.3 2541 1189 4 ENSG00000147573.15 TRIM55 chr8 66126896 66175487 + protein_coding KNOWN OTTHUMG00000164473.2 48592 3081 37 ENSG00000147571.4 CRH chr8 66176382 66178725 - protein_coding KNOWN OTTHUMG00000164474.2 2344 1543 2 ENSG00000253138.4 LINC00967 chr8 66192093 66197315 + lincRNA NOVEL OTTHUMG00000164475.1 5223 2003 13 ENSG00000246145.1 RRS1-AS1 chr8 66419589 66428977 - lincRNA NOVEL OTTHUMG00000164956.1 9389 4366 3 ENSG00000179041.3 RRS1 chr8 66429028 66430733 + protein_coding KNOWN OTTHUMG00000164765.2 1706 1706 1 ENSG00000147576.14 ADHFE1 chr8 66430185 66471601 + protein_coding KNOWN OTTHUMG00000150215.3 41417 3750 150 ENSG00000169085.10 C8orf46 chr8 66460003 66518524 + protein_coding KNOWN OTTHUMG00000156998.9 58522 5808 69 ENSG00000253623.1 RP11-346I3.2 chr8 66480648 66481486 + processed_pseudogene KNOWN OTTHUMG00000164742.1 839 839 1 ENSG00000206949.1 RNU6-1324P chr8 66501205 66501311 - snRNA KNOWN NA 107 107 1 ENSG00000235005.1 RP11-195M16.1 chr1 109884176 109886264 - antisense NOVEL OTTHUMG00000011641.1 2089 450 2 ENSG00000185697.15 MYBL1 chr8 66562175 66614247 - protein_coding KNOWN OTTHUMG00000164559.4 52073 7239 52 ENSG00000175073.7 VCPIP1 chr8 66628487 66667217 - protein_coding KNOWN OTTHUMG00000164560.1 38731 9942 3 ENSG00000201365.1 Y_RNA chr8 66653469 66653576 + misc_RNA NOVEL NA 108 108 1 ENSG00000270024.4 C8orf44-SGK3 chr8 66667596 66860472 + protein_coding KNOWN OTTHUMG00000183957.1 192877 2970 22 ENSG00000213865.6 C8orf44 chr8 66667615 66685564 + protein_coding KNOWN OTTHUMG00000164562.3 17950 2505 17 ENSG00000278888.1 AC090154.1 chr8 66674499 66675916 - protein_coding KNOWN NA 1418 171 3 ENSG00000104205.11 SGK3 chr8 66712418 66862022 + protein_coding KNOWN OTTHUMG00000164561.4 149605 6007 129 ENSG00000213005.3 PTTG3P chr8 66767400 66768005 - processed_pseudogene KNOWN OTTHUMG00000164788.1 606 606 1 ENSG00000178460.16 MCMDC2 chr8 66870749 66922048 + protein_coding KNOWN OTTHUMG00000157068.3 51300 6354 82 ENSG00000245910.7 SNHG6 chr8 66921684 66926398 - processed_transcript KNOWN OTTHUMG00000164743.3 4715 1247 16 ENSG00000261055.1 RP11-195M16.3 chr1 109895973 109897861 + lincRNA NOVEL OTTHUMG00000175953.1 1889 1889 1 ENSG00000254341.2 SNORD87 chr8 66922467 66922555 - snoRNA KNOWN NA 89 89 1 ENSG00000261787.1 TCF24 chr8 66946501 66962590 - protein_coding KNOWN OTTHUMG00000177282.2 16090 2589 6 ENSG00000178125.13 PPP1R42 chr8 66964099 67056604 - protein_coding KNOWN OTTHUMG00000164745.2 92506 2250 55 ENSG00000253223.1 RP11-409C19.2 chr8 66984135 66986187 - processed_pseudogene KNOWN OTTHUMG00000164746.1 2053 2053 1 ENSG00000121022.12 COPS5 chr8 67043079 67083783 - protein_coding KNOWN OTTHUMG00000164563.4 40705 7779 82 ENSG00000266491.1 AC109335.1 chr8 67058906 67059003 + miRNA NOVEL NA 98 98 1 ENSG00000104218.12 CSPP1 chr8 67062426 67196263 + protein_coding KNOWN OTTHUMG00000164564.3 133838 7024 107 ENSG00000252637.1 RNA5SP268 chr8 67099302 67099425 + rRNA KNOWN NA 124 124 1 ENSG00000250869.1 RP11-453N18.1 chr8 67133554 67135911 - processed_pseudogene KNOWN OTTHUMG00000160461.1 2358 2358 1 ENSG00000066777.7 ARFGEF1 chr8 67173512 67343677 - protein_coding KNOWN OTTHUMG00000164626.5 170166 10970 110 ENSG00000184371.12 CSF1 chr1 109910242 109930992 + protein_coding KNOWN OTTHUMG00000011646.2 20751 5418 60 ENSG00000271966.1 RP11-7F18.2 chr8 67343975 67345087 + lincRNA NOVEL OTTHUMG00000185478.1 1113 1113 1 ENSG00000241961.1 RP11-7F18.1 chr8 67406515 67407072 + processed_pseudogene KNOWN OTTHUMG00000158620.1 558 558 1 ENSG00000165078.10 CPA6 chr8 67422125 67746345 - protein_coding KNOWN OTTHUMG00000164575.3 324221 2395 27 ENSG00000254253.1 RP11-343B22.2 chr8 67569416 67570078 + processed_pseudogene KNOWN OTTHUMG00000164627.1 663 663 1 ENSG00000255130.1 RP11-396J6.1 chr8 67732587 67735665 + antisense NOVEL OTTHUMG00000165216.1 3079 550 2 ENSG00000255531.1 NDUFS5P6 chr8 67849044 67849338 + processed_pseudogene KNOWN OTTHUMG00000165217.1 295 295 1 ENSG00000046889.17 PREX2 chr8 67952118 68237030 + protein_coding KNOWN OTTHUMG00000164402.2 284913 12058 96 ENSG00000255206.1 RP11-403D15.2 chr8 68082204 68095081 - antisense NOVEL OTTHUMG00000165218.1 12878 774 2 ENSG00000254051.1 RP11-403D15.1 chr8 68176768 68177221 + processed_pseudogene KNOWN OTTHUMG00000164403.1 454 454 1 ENSG00000252210.1 Y_RNA chr8 68223318 68223402 - misc_RNA NOVEL NA 85 85 1 ENSG00000168710.16 AHCYL1 chr1 109984686 110023741 + protein_coding KNOWN OTTHUMG00000011652.3 39056 5113 65 ENSG00000253964.1 RPL31P40 chr8 68293446 68293818 - processed_pseudogene KNOWN OTTHUMG00000164404.2 373 373 1 ENSG00000248801.5 RP11-664D7.4 chr8 68303468 68331491 - antisense NOVEL OTTHUMG00000164449.2 28024 1674 6 ENSG00000165084.14 C8orf34 chr8 68330722 68819022 + protein_coding KNOWN OTTHUMG00000164438.3 488301 10499 68 ENSG00000236191.3 RPS15AP25 chr8 68525517 68525906 - processed_pseudogene KNOWN OTTHUMG00000158623.1 390 390 1 ENSG00000239184.1 RNA5SP269 chr8 68695643 68695779 + rRNA KNOWN NA 137 137 1 ENSG00000254337.1 RP11-865I6.2 chr8 68848742 68852763 - lincRNA NOVEL OTTHUMG00000164447.1 4022 515 3 ENSG00000253658.4 RP11-600K15.1 chr8 68911803 69104190 - lincRNA NOVEL OTTHUMG00000164460.1 192388 2840 14 ENSG00000238808.1 RNU7-102P chr8 69110513 69110574 - snRNA KNOWN NA 62 62 1 ENSG00000254332.1 GS1-44D20.1 chr8 69129598 69130345 + processed_pseudogene KNOWN OTTHUMG00000164462.1 748 748 1 ENSG00000253373.1 RP11-21C17.1 chr8 69175579 69178189 - lincRNA NOVEL OTTHUMG00000164463.1 2611 453 3 ENSG00000143093.13 STRIP1 chr1 110031577 110074641 + protein_coding KNOWN OTTHUMG00000170607.2 43065 7352 92 ENSG00000253479.4 RP11-744J10.3 chr8 69425035 69448244 - lincRNA NOVEL OTTHUMG00000165095.1 23210 1418 7 ENSG00000253216.1 RP11-744J10.2 chr8 69446057 69446260 + processed_pseudogene KNOWN OTTHUMG00000164465.1 204 204 1 ENSG00000137573.12 SULF1 chr8 69466624 69660915 + protein_coding KNOWN OTTHUMG00000164466.3 194292 9404 189 ENSG00000137571.9 SLCO5A1 chr8 69667047 69835064 - protein_coding KNOWN OTTHUMG00000165121.4 168018 9992 45 ENSG00000222889.1 RN7SKP29 chr8 69700224 69700495 + misc_RNA KNOWN NA 272 272 1 ENSG00000254557.1 RP11-102F4.2 chr8 69713390 69719722 + antisense NOVEL OTTHUMG00000165129.1 6333 552 3 ENSG00000271113.1 RP11-159H10.4 chr8 69794062 69794734 + processed_pseudogene KNOWN OTTHUMG00000184674.1 673 673 1 ENSG00000246528.3 RP11-159H10.3 chr8 69834111 69854971 + antisense NOVEL OTTHUMG00000165122.3 20861 1967 10 ENSG00000277740.1 Metazoa_SRP chr8 69851148 69851436 - misc_RNA NOVEL NA 289 289 1 ENSG00000255107.1 RP11-159H10.1 chr8 69859264 69860540 - processed_pseudogene KNOWN OTTHUMG00000165123.1 1277 1277 1 ENSG00000258634.3 RP4-773N10.4 chr1 110058340 110062555 + antisense NOVEL OTTHUMG00000170608.1 4216 4216 1 ENSG00000239580.3 RN7SL675P chr8 69922751 69923047 - misc_RNA KNOWN NA 297 297 1 ENSG00000223293.1 RNA5SP270 chr8 69929905 69930022 + rRNA KNOWN NA 118 118 1 ENSG00000280393.1 RP11-449M6.3 chr8 69938168 69938400 + TEC KNOWN OTTHUMG00000187190.1 233 233 1 ENSG00000247570.2 SDCBPP2 chr8 69942948 69944648 + processed_pseudogene KNOWN OTTHUMG00000160524.1 1701 885 3 ENSG00000253721.1 SUMO2P20 chr8 69987415 69987697 - processed_pseudogene KNOWN OTTHUMG00000164433.1 283 283 1 ENSG00000147596.3 PRDM14 chr8 70051651 70071693 - protein_coding KNOWN OTTHUMG00000150495.1 20043 2443 10 ENSG00000212473.1 RNU1-101P chr8 70077906 70078032 - snRNA KNOWN NA 127 127 1 ENSG00000253173.3 RP11-152C15.1 chr8 70103798 70104179 - processed_pseudogene KNOWN OTTHUMG00000164434.1 382 382 1 ENSG00000140396.11 NCOA2 chr8 70109762 70403805 - protein_coding KNOWN OTTHUMG00000164671.2 294044 10026 67 ENSG00000213003.3 BTF3P12 chr8 70273369 70273837 + processed_pseudogene KNOWN OTTHUMG00000164435.1 469 469 1 ENSG00000156150.6 ALX3 chr1 110059994 110070700 - protein_coding KNOWN OTTHUMG00000011650.2 10707 1859 4 ENSG00000207036.1 RNY3P14 chr8 70357347 70357448 + misc_RNA KNOWN NA 102 102 1 ENSG00000241204.1 RP11-333A23.1 chr8 70424125 70424576 - processed_pseudogene KNOWN OTTHUMG00000158624.1 452 452 1 ENSG00000253143.3 RP11-333A23.3 chr8 70471112 70480623 - lincRNA NOVEL OTTHUMG00000164436.1 9512 736 2 ENSG00000253967.1 RP11-333A23.4 chr8 70471134 70485687 + lincRNA NOVEL OTTHUMG00000164437.1 14554 2367 4 ENSG00000275128.1 Metazoa_SRP chr8 70480192 70480487 - misc_RNA NOVEL NA 296 296 1 ENSG00000241105.1 RP11-333A23.2 chr8 70506251 70506818 - processed_pseudogene KNOWN OTTHUMG00000158625.1 568 568 1 ENSG00000067167.6 TRAM1 chr8 70573442 70608387 - protein_coding KNOWN OTTHUMG00000164428.1 34946 3878 40 ENSG00000246366.5 RP11-382J12.1 chr8 70608577 70663279 + antisense NOVEL OTTHUMG00000164429.2 54703 5450 17 ENSG00000147592.7 LACTB2 chr8 70635318 70669174 - protein_coding KNOWN OTTHUMG00000164430.1 33857 1931 19 ENSG00000243532.3 RN7SL19P chr8 70654578 70654883 - misc_RNA KNOWN NA 306 306 1 ENSG00000237436.1 RP11-312B8.1 chr1 6783892 6784843 - antisense NOVEL OTTHUMG00000001213.1 952 415 3 ENSG00000258673.1 LINC01397 chr1 110082688 110109719 + antisense NOVEL OTTHUMG00000170609.1 27032 579 4 ENSG00000221947.6 XKR9 chr8 70669365 70790371 + protein_coding KNOWN OTTHUMG00000164431.1 121007 3905 24 ENSG00000223220.1 Y_RNA chr8 70780914 70781008 - misc_RNA NOVEL NA 95 95 1 ENSG00000254031.4 RP11-326E22.1 chr8 71155457 71204223 + antisense NOVEL OTTHUMG00000164432.1 48767 977 9 ENSG00000104313.16 EYA1 chr8 71197433 71362232 - protein_coding KNOWN OTTHUMG00000149894.5 164800 5170 165 ENSG00000253379.4 RP11-1102P16.1 chr8 71403440 71592025 - lincRNA NOVEL OTTHUMG00000164448.1 188586 4175 17 ENSG00000253124.1 TRAPPC2P2 chr8 71448811 71449219 - processed_pseudogene KNOWN OTTHUMG00000164467.1 409 409 1 ENSG00000221446.1 AC099805.1 chr8 71449695 71449808 + miRNA NOVEL NA 114 114 1 ENSG00000254277.1 RP11-1144P22.1 chr8 71675300 71702786 + lincRNA NOVEL OTTHUMG00000164487.1 27487 901 5 ENSG00000253287.1 RP11-281N10.1 chr8 71779605 71792875 - lincRNA NOVEL OTTHUMG00000164488.1 13271 719 3 ENSG00000200191.1 U8 chr8 71815494 71815625 - snoRNA NOVEL NA 132 132 1 ENSG00000186150.4 UBL4B chr1 110112468 110113945 + protein_coding KNOWN OTTHUMG00000166989.2 1478 1478 1 ENSG00000235531.8 RP11-383H13.1 chr8 71828167 72118393 + antisense NOVEL OTTHUMG00000164497.3 290227 6284 42 ENSG00000264576.1 AC104012.1 chr8 71832604 71832688 - miRNA NOVEL NA 85 85 1 ENSG00000178860.8 MSC chr8 71841549 71844468 - protein_coding KNOWN OTTHUMG00000164489.1 2920 2113 6 ENSG00000241942.2 RPS20P20 chr8 71895991 71896330 + processed_pseudogene KNOWN OTTHUMG00000158627.2 340 340 1 ENSG00000104321.9 TRPA1 chr8 72019917 72075617 - protein_coding KNOWN OTTHUMG00000164516.3 55701 6377 64 ENSG00000253317.1 RP11-142A23.1 chr8 72196334 72202269 + lincRNA NOVEL OTTHUMG00000164458.1 5936 798 2 ENSG00000250979.1 RP11-656G20.1 chr8 72202751 72251565 - unprocessed_pseudogene KNOWN OTTHUMG00000160469.1 48815 3048 25 ENSG00000252509.1 RNA5SP271 chr8 72357728 72357815 + rRNA KNOWN NA 88 88 1 ENSG00000212989.3 RP11-351E7.2 chr8 72429620 72430112 + processed_pseudogene KNOWN OTTHUMG00000165226.1 493 493 1 ENSG00000254347.1 RP11-351E7.1 chr8 72462311 72470972 + lincRNA NOVEL OTTHUMG00000164459.1 8662 252 2 ENSG00000197106.6 SLC6A17 chr1 110150486 110202202 + protein_coding KNOWN OTTHUMG00000011761.2 51717 6644 14 ENSG00000182674.5 KCNB2 chr8 72537391 72938349 + protein_coding KNOWN OTTHUMG00000164498.2 400959 3582 3 ENSG00000253226.1 HAUS1P3 chr8 72618722 72619383 - processed_pseudogene KNOWN OTTHUMG00000164623.1 662 662 1 ENSG00000278193.1 RP11-313C15.2 chr8 72660584 72661470 - unprocessed_pseudogene KNOWN OTTHUMG00000187726.1 887 603 2 ENSG00000253726.1 RP11-313C15.1 chr8 72732045 72751843 + sense_intronic NOVEL OTTHUMG00000164491.1 19799 1722 3 ENSG00000253784.1 RP11-1145L24.1 chr8 72874859 72881740 - lincRNA NOVEL OTTHUMG00000164520.1 6882 488 3 ENSG00000260838.3 RP11-531A24.3 chr8 72947150 72950445 + lincRNA NOVEL OTTHUMG00000164521.2 3296 3296 1 ENSG00000147601.12 TERF1 chr8 73008864 73048122 + protein_coding KNOWN OTTHUMG00000164522.4 39259 8831 39 ENSG00000222488.1 RNU6-285P chr8 73018945 73019044 - snRNA KNOWN NA 100 100 1 ENSG00000272254.1 RP11-531A24.7 chr8 73042910 73043346 - antisense NOVEL OTTHUMG00000185482.1 437 437 1 ENSG00000253636.1 RP11-531A24.5 chr8 73052178 73063061 + antisense NOVEL OTTHUMG00000164580.1 10884 3549 2 ENSG00000227091.1 RP5-1028L10.1 chr1 110166186 110172489 - antisense NOVEL OTTHUMG00000011762.1 6304 997 6 ENSG00000164764.10 SBSPON chr8 73064540 73124088 - protein_coding KNOWN OTTHUMG00000157144.2 59549 4383 10 ENSG00000237061.1 RP11-956J14.1 chr8 73083787 73085879 - sense_intronic NOVEL OTTHUMG00000157143.1 2093 480 2 ENSG00000253564.1 RP11-956J14.2 chr8 73215929 73216627 - processed_pseudogene KNOWN OTTHUMG00000164624.1 699 699 1 ENSG00000274443.3 C8orf89 chr8 73241329 73259502 - protein_coding NOVEL OTTHUMG00000189250.2 18174 658 11 ENSG00000222334.4 AC008598.1 chr8 73273105 73273182 + miRNA NOVEL NA 78 78 1 ENSG00000254213.2 RP11-434I12.5 chr8 73277364 73278046 - processed_pseudogene KNOWN OTTHUMG00000164917.2 683 683 1 ENSG00000147604.12 RPL7 chr8 73290267 73295789 - protein_coding KNOWN OTTHUMG00000134312.3 5523 2907 37 ENSG00000121039.8 RDH10 chr8 73294612 73325281 + protein_coding KNOWN OTTHUMG00000164492.1 30670 5321 19 ENSG00000250295.5 RP11-434I12.2 chr8 73297711 73356461 - antisense NOVEL OTTHUMG00000164493.1 58751 3801 13 ENSG00000253339.1 RP11-434I12.3 chr8 73358913 73362788 + lincRNA NOVEL OTTHUMG00000164494.1 3876 781 4 ENSG00000235526.1 RP5-1028L10.2 chr1 110177643 110178719 - antisense NOVEL OTTHUMG00000011763.1 1077 508 2 ENSG00000253235.1 RP11-434I12.4 chr8 73368770 73369295 - lincRNA NOVEL OTTHUMG00000164495.1 526 343 2 ENSG00000253302.1 STAU2-AS1 chr8 73420004 73441526 + antisense NOVEL OTTHUMG00000164568.1 21523 2279 5 ENSG00000040341.16 STAU2 chr8 73420369 73747708 - protein_coding KNOWN OTTHUMG00000164499.9 327340 8998 224 ENSG00000254273.1 RP11-181D18.4 chr8 73511276 73511654 - processed_pseudogene KNOWN OTTHUMG00000164570.1 379 379 1 ENSG00000253383.1 RP11-116B19.2 chr8 73590574 73590883 + processed_pseudogene KNOWN OTTHUMG00000164571.1 310 310 1 ENSG00000254105.1 VENTXP6 chr8 73651289 73651602 + processed_pseudogene KNOWN OTTHUMG00000164572.1 314 314 1 ENSG00000254538.1 RP11-463D19.1 chr8 73670441 73732897 + lincRNA NOVEL OTTHUMG00000165228.1 62457 707 5 ENSG00000258677.2 RP11-463D19.2 chr8 73688691 73878854 - protein_coding NOVEL OTTHUMG00000171407.2 190164 776 8 ENSG00000104343.18 UBE2W chr8 73780097 73878910 - protein_coding KNOWN OTTHUMG00000164517.5 98814 9090 41 ENSG00000253273.2 RP11-99A14.1 chr8 73831143 73831947 + unprocessed_pseudogene KNOWN OTTHUMG00000164500.4 805 805 1 ENSG00000224965.1 KCNC4-AS1 chr1 110208834 110209987 - antisense NOVEL OTTHUMG00000040850.1 1154 748 2 ENSG00000272469.2 Metazoa_SRP chr8 73833773 73834042 - misc_RNA NOVEL NA 270 270 1 ENSG00000251633.3 GYG1P1 chr8 73905357 73915010 - unprocessed_pseudogene KNOWN OTTHUMG00000160472.4 9654 698 2 ENSG00000154582.15 TCEB1 chr8 73939169 73972287 - protein_coding KNOWN OTTHUMG00000164501.3 33119 4934 44 ENSG00000175606.9 TMEM70 chr8 73972437 73982783 + protein_coding KNOWN OTTHUMG00000164502.1 10347 2982 22 ENSG00000244295.2 RPS20P21 chr8 73982125 73982467 + processed_pseudogene KNOWN OTTHUMG00000158629.4 343 343 1 ENSG00000253833.1 RP11-367E12.4 chr8 73984493 73984883 + processed_pseudogene KNOWN OTTHUMG00000164503.2 391 391 1 ENSG00000154589.5 LY96 chr8 73991352 74029087 + protein_coding KNOWN OTTHUMG00000164504.2 37736 607 9 ENSG00000212348.1 RNU6-1300P chr8 74048677 74048784 + snRNA KNOWN NA 108 108 1 ENSG00000254288.1 RP11-6I2.3 chr8 74052340 74099853 + lincRNA NOVEL OTTHUMG00000164505.1 47514 738 2 ENSG00000240047.2 RPS3AP32 chr8 74055882 74056647 + processed_pseudogene KNOWN OTTHUMG00000158628.3 766 766 1 ENSG00000116396.12 KCNC4 chr1 110211343 110283100 + protein_coding KNOWN OTTHUMG00000011037.10 71758 24423 24 ENSG00000212485.1 RNU6-1197P chr8 74079537 74079643 + snRNA KNOWN NA 107 107 1 ENSG00000253115.1 RP11-6I2.4 chr8 74103516 74106744 + lincRNA NOVEL OTTHUMG00000164519.1 3229 429 2 ENSG00000253983.2 RP1-16A9.1 chr8 74199396 74208441 + antisense NOVEL OTTHUMG00000164506.2 9046 993 3 ENSG00000104369.4 JPH1 chr8 74234700 74321328 - protein_coding KNOWN OTTHUMG00000164524.1 86629 4378 14 ENSG00000104381.11 GDAP1 chr8 74321130 74488872 + protein_coding KNOWN OTTHUMG00000164509.2 167743 4052 37 ENSG00000253596.1 CTD-2320G14.2 chr8 74347757 74350050 - antisense NOVEL OTTHUMG00000164510.1 2294 590 2 ENSG00000207417.1 Y_RNA chr8 74376687 74376793 + misc_RNA NOVEL NA 107 107 1 ENSG00000266502.1 MIR5681A chr8 74548543 74548617 + miRNA KNOWN NA 75 75 1 ENSG00000254349.4 FLJ39080 chr8 74599775 74823313 + lincRNA NOVEL OTTHUMG00000164511.2 223539 2906 24 ENSG00000253341.1 RP11-730G20.2 chr8 74603244 74604244 - processed_pseudogene KNOWN OTTHUMG00000164512.1 1001 1001 1 ENSG00000200536.1 SNORA25 chr1 110272484 110272607 + snoRNA NOVEL NA 124 124 1 ENSG00000254080.1 RP11-730G20.1 chr8 74609698 74633320 - antisense NOVEL OTTHUMG00000164513.1 23623 677 5 ENSG00000253706.4 RP11-758M4.4 chr8 74798784 74866939 - antisense NOVEL OTTHUMG00000164543.1 68156 3611 11 ENSG00000253777.1 RP11-758M4.3 chr8 74804287 74804811 - processed_pseudogene KNOWN OTTHUMG00000164515.2 525 525 1 ENSG00000137558.6 PI15 chr8 74824537 74855029 + protein_coding KNOWN OTTHUMG00000164528.1 30493 7156 11 ENSG00000254043.1 RP11-3N13.2 chr8 74891151 74896302 - lincRNA NOVEL OTTHUMG00000164544.1 5152 738 2 ENSG00000121005.7 CRISPLD1 chr8 74984515 75034558 + protein_coding KNOWN OTTHUMG00000164529.1 50044 4543 49 ENSG00000254238.1 RP11-300E4.2 chr8 75026428 75029460 - antisense NOVEL OTTHUMG00000164545.1 3033 590 2 ENSG00000253712.1 RP11-697M17.2 chr8 75167704 75176656 - lincRNA NOVEL OTTHUMG00000164546.1 8953 490 2 ENSG00000249395.2 CASC9 chr8 75223404 75324741 - lincRNA NOVEL OTTHUMG00000164547.1 101338 1473 9 ENSG00000253229.1 HIGD1AP6 chr8 75302296 75302574 + processed_pseudogene KNOWN OTTHUMG00000164548.1 279 279 1 ENSG00000227963.1 RP5-1074L1.1 chr1 110286375 110339171 - antisense NOVEL OTTHUMG00000011283.1 52797 2611 4 ENSG00000254023.1 PKMP4 chr8 75376709 75377014 + processed_pseudogene KNOWN OTTHUMG00000164549.1 306 306 1 ENSG00000164749.10 HNF4G chr8 75407914 75566843 + protein_coding KNOWN OTTHUMG00000149920.2 158930 4806 31 ENSG00000221029.1 AC016194.1 chr8 75786365 75786460 - miRNA NOVEL NA 96 96 1 ENSG00000222231.1 RNU2-54P chr8 76265543 76265732 - snRNA KNOWN NA 190 190 1 ENSG00000270866.1 RP11-706J10.2 chr8 76403998 76405091 + lincRNA NOVEL OTTHUMG00000184924.1 1094 1094 1 ENSG00000271167.1 LINC01109 chr8 76404058 76407138 + lincRNA NOVEL OTTHUMG00000184925.1 3081 3081 1 ENSG00000254300.1 LINC01111 chr8 76406654 76524356 + lincRNA NOVEL OTTHUMG00000164553.1 117703 1663 6 ENSG00000253661.1 ZFHX4-AS1 chr8 76491200 76683278 - antisense KNOWN OTTHUMG00000164554.1 192079 2251 13 ENSG00000253681.1 RP11-115I9.1 chr8 76576551 76579345 - sense_intronic NOVEL OTTHUMG00000164555.1 2795 339 2 ENSG00000254305.1 MRPL9P1 chr8 76603240 76603852 - transcribed_processed_pseudogene KNOWN OTTHUMG00000164556.1 613 613 1 ENSG00000162775.13 RBM15 chr1 110338506 110346681 + protein_coding KNOWN OTTHUMG00000011284.5 8176 4670 12 ENSG00000091656.14 ZFHX4 chr8 76681219 76867285 + protein_coding KNOWN OTTHUMG00000164557.2 186067 15687 50 ENSG00000276673.1 uc_338 chr8 76733302 76733476 - misc_RNA NOVEL NA 175 175 1 ENSG00000253416.1 RP11-48D4.2 chr8 76904591 76913399 + lincRNA NOVEL OTTHUMG00000164558.1 8809 651 3 ENSG00000266712.2 AC090810.1 chr8 76966759 76966870 - miRNA NOVEL NA 112 112 1 ENSG00000164751.13 PEX2 chr8 76980258 77001044 - protein_coding KNOWN OTTHUMG00000164530.1 20787 4969 20 ENSG00000253952.1 HIGD1AP18 chr8 77013751 77014028 - processed_pseudogene KNOWN OTTHUMG00000164625.1 278 278 1 ENSG00000254366.5 RP11-38H17.1 chr8 77399072 77537290 + lincRNA NOVEL OTTHUMG00000164531.1 138219 864 10 ENSG00000254001.4 RP11-91P17.1 chr8 78148101 78153913 + lincRNA NOVEL OTTHUMG00000164616.1 5813 690 4 ENSG00000252935.1 RNU6-1220P chr8 78398515 78398622 - snRNA KNOWN NA 108 108 1 ENSG00000254266.4 RP11-594N15.2 chr8 78426103 78558503 - lincRNA NOVEL OTTHUMG00000164617.1 132401 2656 12 ENSG00000171735.17 CAMTA1 chr1 6785324 7769706 + protein_coding KNOWN OTTHUMG00000001212.5 984383 10033 89 ENSG00000224699.7 LAMTOR5-AS1 chr1 110347116 110443817 + processed_transcript NOVEL OTTHUMG00000019824.9 96702 10755 189 ENSG00000171033.11 PKIA chr8 78516139 78605267 + protein_coding KNOWN OTTHUMG00000164618.1 89129 4216 10 ENSG00000260398.1 RP11-594N15.3 chr8 78605952 78609705 + sense_overlapping NOVEL OTTHUMG00000173418.1 3754 3754 1 ENSG00000104427.10 ZC2HC1A chr8 78666047 78719765 + protein_coding KNOWN OTTHUMG00000164619.2 53719 4181 22 ENSG00000104432.11 IL7 chr8 78675743 78805523 - protein_coding KNOWN OTTHUMG00000164620.1 129781 3392 52 ENSG00000254352.1 RP11-578O24.2 chr8 78723796 78724136 - processed_pseudogene KNOWN OTTHUMG00000164622.1 341 341 1 ENSG00000253919.1 PRKRIRP7 chr8 78760142 78762431 - processed_pseudogene KNOWN OTTHUMG00000164621.1 2290 2290 1 ENSG00000261618.1 RP11-79H23.3 chr8 78837529 78840522 + lincRNA NOVEL OTTHUMG00000173421.1 2994 2994 1 ENSG00000264969.1 AC009941.1 chr8 79097363 79097453 + miRNA NOVEL NA 91 91 1 ENSG00000253659.1 RP11-1114I9.1 chr8 79297717 79314471 + lincRNA NOVEL OTTHUMG00000164525.1 16755 633 3 ENSG00000253391.1 RP11-758H6.1 chr8 79520145 79520649 + processed_pseudogene KNOWN OTTHUMG00000164526.1 505 505 1 ENSG00000168679.16 SLC16A4 chr1 110362848 110391082 - protein_coding KNOWN OTTHUMG00000011285.5 28235 3167 69 ENSG00000240540.2 RPL3P9 chr8 79571153 79572335 - processed_pseudogene KNOWN OTTHUMG00000158635.2 1183 1183 1 ENSG00000104435.12 STMN2 chr8 79610814 79666175 + protein_coding KNOWN OTTHUMG00000164610.3 55362 2362 16 ENSG00000164683.15 HEY1 chr8 79764010 79767863 - protein_coding KNOWN OTTHUMG00000164641.2 3854 3232 25 ENSG00000272138.1 RP11-27N21.3 chr8 79768142 79802842 + lincRNA NOVEL OTTHUMG00000185488.1 34701 789 7 ENSG00000249328.2 RP11-26J3.1 chr8 79769372 79871759 - lincRNA NOVEL OTTHUMG00000164566.2 102388 2455 10 ENSG00000238884.1 RNU7-85P chr8 79800133 79800195 - snRNA KNOWN NA 63 63 1 ENSG00000147586.8 MRPS28 chr8 79918717 80030289 - protein_coding KNOWN OTTHUMG00000164642.5 111573 1817 28 ENSG00000276418.3 RP11-26J3.4 chr8 79918860 80080831 - protein_coding NOVEL OTTHUMG00000186650.1 161972 1593 15 ENSG00000272518.1 RP11-26J3.3 chr8 79956465 79957381 - sense_intronic NOVEL OTTHUMG00000185346.1 917 917 1 ENSG00000272264.1 RP11-92K15.3 chr8 80032724 80033300 - lincRNA NOVEL OTTHUMG00000185496.1 577 577 1 ENSG00000273373.1 RP5-1074L1.4 chr1 110370154 110373003 + antisense NOVEL OTTHUMG00000186360.1 2850 2850 1 ENSG00000076554.14 TPD52 chr8 80034745 80231232 - protein_coding KNOWN OTTHUMG00000164565.12 196488 8197 143 ENSG00000254205.1 RP11-92K15.1 chr8 80122852 80127670 + antisense NOVEL OTTHUMG00000164567.2 4819 364 2 ENSG00000241550.3 RN7SL41P chr8 80204606 80204902 + misc_RNA KNOWN NA 297 297 1 ENSG00000265588.1 MIR5708 chr8 80241389 80241473 + miRNA KNOWN NA 85 85 1 ENSG00000241746.1 RP11-941H19.1 chr8 80265528 80266155 - processed_pseudogene KNOWN OTTHUMG00000158636.1 628 628 1 ENSG00000253238.1 RP11-941H19.3 chr8 80266154 80339840 + lincRNA NOVEL OTTHUMG00000164551.1 73687 444 4 ENSG00000213791.4 RP11-941H19.2 chr8 80300869 80301481 + processed_pseudogene KNOWN OTTHUMG00000158641.1 613 613 1 ENSG00000206649.1 SNORA20 chr8 80316939 80317069 - snoRNA NOVEL NA 131 131 1 ENSG00000253237.2 RP11-775E10.1 chr8 80351132 80351416 + processed_pseudogene KNOWN OTTHUMG00000164552.2 285 285 1 ENSG00000252884.1 RNU6-1213P chr8 80405516 80405609 + snRNA KNOWN NA 94 94 1 ENSG00000134248.12 LAMTOR5 chr1 110401249 110407942 - protein_coding KNOWN OTTHUMG00000011568.5 6694 2388 30 ENSG00000251867.3 RP11-48B3.5 chr8 80484561 80485619 - antisense NOVEL OTTHUMG00000185497.1 1059 1059 1 ENSG00000277604.1 Y_RNA chr8 80484589 80484683 - misc_RNA NOVEL NA 95 95 1 ENSG00000205189.10 ZBTB10 chr8 80485619 80526265 + protein_coding KNOWN OTTHUMG00000155016.6 40647 10216 33 ENSG00000254162.1 RP11-48B3.3 chr8 80535006 80539135 - lincRNA NOVEL OTTHUMG00000164576.1 4130 3766 2 ENSG00000260317.1 RP11-48B3.4 chr8 80541300 80543104 + lincRNA NOVEL OTTHUMG00000174444.1 1805 1805 1 ENSG00000188856.6 RPSAP47 chr8 80558870 80559757 + processed_pseudogene KNOWN OTTHUMG00000158642.1 888 888 1 ENSG00000252057.2 RNU7-174P chr8 80560567 80560625 + snRNA KNOWN NA 59 59 1 ENSG00000253760.1 RP11-48B3.2 chr8 80568050 80568506 - processed_pseudogene KNOWN OTTHUMG00000164577.1 457 457 1 ENSG00000223327.1 RNU2-71P chr8 80585585 80585773 - snRNA KNOWN NA 189 189 1 ENSG00000254181.1 SLC25A51P3 chr8 80594815 80595703 - processed_pseudogene KNOWN OTTHUMG00000164578.1 889 889 1 ENSG00000143125.5 PROK1 chr1 110451200 110457354 + protein_coding KNOWN OTTHUMG00000011569.2 6155 1338 3 ENSG00000243424.2 RN7SL107P chr8 80613544 80613826 - misc_RNA KNOWN NA 283 283 1 ENSG00000164684.12 ZNF704 chr8 80628451 80874781 - protein_coding KNOWN OTTHUMG00000164733.2 246331 15008 27 ENSG00000254331.1 CKS1BP7 chr8 80644939 80645173 - processed_pseudogene KNOWN OTTHUMG00000164749.1 235 235 1 ENSG00000212429.1 RNU11-6P chr8 80749561 80749693 - snRNA KNOWN NA 133 133 1 ENSG00000243951.1 RN7SL308P chr8 80776666 80776962 - misc_RNA KNOWN NA 297 297 1 ENSG00000253516.1 HMGB1P41 chr8 80812142 80812581 - processed_pseudogene KNOWN OTTHUMG00000164591.1 440 440 1 ENSG00000076641.4 PAG1 chr8 80967810 81112068 - protein_coding KNOWN OTTHUMG00000164592.3 144259 11023 15 ENSG00000254060.1 RP11-172E10.1 chr8 81036964 81040831 + lincRNA NOVEL OTTHUMG00000164593.2 3868 545 3 ENSG00000254177.1 RP11-1149M10.1 chr8 81058523 81067744 + lincRNA NOVEL OTTHUMG00000164594.1 9222 431 2 ENSG00000253214.1 RP11-1149M10.2 chr8 81154279 81164599 + lincRNA NOVEL OTTHUMG00000164595.1 10321 1136 6 ENSG00000270380.1 RP11-470L19.5 chr1 110456505 110457354 - antisense NOVEL OTTHUMG00000184692.1 850 482 2 ENSG00000254014.1 RP11-363E6.1 chr8 81244156 81244338 + processed_pseudogene KNOWN OTTHUMG00000164596.1 183 183 1 ENSG00000253677.1 UBE2HP1 chr8 81254870 81255229 + processed_pseudogene KNOWN OTTHUMG00000164597.1 360 360 1 ENSG00000272425.1 RP11-363E6.4 chr8 81275399 81277570 - lincRNA NOVEL OTTHUMG00000185499.1 2172 2172 1 ENSG00000254027.1 RP11-363E6.3 chr8 81279871 81281446 - antisense NOVEL OTTHUMG00000164598.1 1576 701 4 ENSG00000164687.9 FABP5 chr8 81280363 81284777 + protein_coding KNOWN OTTHUMG00000134313.1 4415 2077 12 ENSG00000273902.1 AC018616.1 chr8 81356161 81356274 + miRNA NOVEL NA 114 114 1 ENSG00000253859.2 RP11-157I4.4 chr8 81439436 81521818 + antisense NOVEL OTTHUMG00000164599.2 82383 546 4 ENSG00000147588.6 PMP2 chr8 81440326 81447523 - protein_coding KNOWN OTTHUMG00000164600.1 7198 3608 7 ENSG00000205186.2 FABP9 chr8 81458341 81461579 - protein_coding KNOWN OTTHUMG00000164601.2 3239 497 4 ENSG00000170323.7 FABP4 chr8 81478419 81483263 - protein_coding KNOWN OTTHUMG00000164602.2 4845 1396 14 ENSG00000240194.5 CYMP chr1 110480752 110491277 + unitary_pseudogene KNOWN OTTHUMG00000022784.3 10526 1263 15 ENSG00000253374.4 RP11-257P3.3 chr8 81521618 81533275 + antisense NOVEL OTTHUMG00000164677.1 11658 928 7 ENSG00000237264.4 FTH1P11 chr8 81521682 81522232 - processed_pseudogene KNOWN OTTHUMG00000164678.2 551 551 1 ENSG00000197416.4 FABP12 chr8 81524981 81531378 - protein_coding KNOWN OTTHUMG00000164679.1 6398 613 8 ENSG00000251521.2 IMPA1P chr8 81605569 81631134 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000164680.1 25566 977 11 ENSG00000254151.1 NIPA2P4 chr8 81617220 81618560 - processed_pseudogene KNOWN OTTHUMG00000164769.1 1341 1341 1 ENSG00000240427.1 RPS26P34 chr8 81627269 81627617 + processed_pseudogene KNOWN OTTHUMG00000158661.1 349 349 1 ENSG00000205184.2 SLC10A5P1 chr8 81634357 81635662 - unprocessed_pseudogene KNOWN OTTHUMG00000164681.1 1306 1306 1 ENSG00000133731.8 IMPA1 chr8 81657961 81686693 - protein_coding KNOWN OTTHUMG00000164682.2 28733 3720 92 ENSG00000253598.1 SLC10A5 chr8 81693607 81696174 - protein_coding KNOWN OTTHUMG00000164683.1 2568 2568 1 ENSG00000280193.1 RP13-923O23.7 chr8 81696368 81698694 + TEC KNOWN OTTHUMG00000173431.1 2327 2327 1 ENSG00000235407.1 RP11-470L19.2 chr1 110487680 110490258 - lincRNA NOVEL OTTHUMG00000022783.2 2579 2351 2 ENSG00000104231.9 ZFAND1 chr8 81701334 81732903 - protein_coding KNOWN OTTHUMG00000164684.4 31570 4214 139 ENSG00000164695.4 CHMP4C chr8 81732434 81759515 + protein_coding KNOWN OTTHUMG00000164726.1 27082 1866 5 ENSG00000253334.1 RP13-923O23.6 chr8 81791823 81815714 + antisense NOVEL OTTHUMG00000164770.2 23892 478 2 ENSG00000104497.12 SNX16 chr8 81799581 81842866 - protein_coding KNOWN OTTHUMG00000164727.2 43286 4610 62 ENSG00000231942.3 HNRNPA1P36 chr8 81807772 81808726 + processed_pseudogene KNOWN OTTHUMG00000164728.1 955 955 1 ENSG00000254689.1 RP11-354A14.1 chr8 81885377 81923193 + lincRNA NOVEL OTTHUMG00000165230.1 37817 466 2 ENSG00000254123.1 RP11-99H20.1 chr8 82098451 82160577 - lincRNA NOVEL OTTHUMG00000164603.1 62127 1164 6 ENSG00000206228.4 HNRNPA1P4 chr8 82291624 82292379 - processed_pseudogene KNOWN OTTHUMG00000163344.1 756 756 1 ENSG00000253503.4 RP11-653B10.1 chr8 82514568 82677153 - lincRNA NOVEL OTTHUMG00000164855.1 162586 716 10 ENSG00000253836.1 RP11-731N10.1 chr8 82862779 82958696 - lincRNA NOVEL OTTHUMG00000164604.1 95918 814 6 ENSG00000143105.6 KCNA10 chr1 110517251 110518838 - protein_coding KNOWN OTTHUMG00000022785.1 1588 1588 1 ENSG00000254394.1 CTD-2272D18.1 chr8 82912104 82961926 + lincRNA NOVEL OTTHUMG00000164605.1 49823 616 4 ENSG00000253581.1 CTD-2272D18.2 chr8 82979411 82979886 + processed_pseudogene KNOWN OTTHUMG00000164606.1 476 476 1 ENSG00000277929.1 AC090095.1 chr8 83024813 83024909 + miRNA NOVEL NA 97 97 1 ENSG00000254189.1 RP11-296C13.1 chr8 83099976 83100846 - processed_pseudogene KNOWN OTTHUMG00000164607.1 871 871 1 ENSG00000253423.1 RP11-813B8.1 chr8 83200952 83202431 - processed_pseudogene KNOWN OTTHUMG00000164608.1 1480 1480 1 ENSG00000274116.1 RP11-813B8.2 chr8 83293925 83294271 - processed_pseudogene KNOWN OTTHUMG00000187729.1 347 347 1 ENSG00000275537.1 AC090132.1 chr8 83314617 83314710 - miRNA NOVEL NA 94 94 1 ENSG00000253898.1 LINC01419 chr8 83403758 83408900 + lincRNA NOVEL OTTHUMG00000164609.1 5143 1521 2 ENSG00000254202.1 RP11-120I21.2 chr8 83912713 84140283 + lincRNA NOVEL OTTHUMG00000164613.1 227571 640 4 ENSG00000254195.1 TPM3P3 chr8 84162118 84162471 + processed_pseudogene KNOWN OTTHUMG00000164614.1 354 354 1 ENSG00000177301.12 KCNA2 chr1 110593580 110631474 - protein_coding KNOWN OTTHUMG00000011567.4 37895 4012 14 ENSG00000253362.1 RP11-120I21.3 chr8 84163449 84164564 - unprocessed_pseudogene KNOWN OTTHUMG00000164845.1 1116 381 4 ENSG00000184672.10 RALYL chr8 84182787 84921844 + protein_coding KNOWN OTTHUMG00000164628.4 739058 4538 70 ENSG00000221185.2 AC103816.1 chr8 84296003 84296088 - miRNA NOVEL NA 86 86 1 ENSG00000275039.1 AC092699.1 chr8 84408607 84408663 + miRNA NOVEL NA 57 57 1 ENSG00000206701.1 RNU6-1040P chr8 84665759 84665865 - snRNA KNOWN NA 107 107 1 ENSG00000253137.1 RP11-509P12.1 chr8 84678798 84679842 + processed_pseudogene KNOWN OTTHUMG00000164631.1 1045 1045 1 ENSG00000248978.2 RP11-98H4.1 chr8 84828573 84829479 - unprocessed_pseudogene KNOWN OTTHUMG00000160477.2 907 541 2 ENSG00000254212.1 RP11-98H4.4 chr8 84864668 84864907 - processed_pseudogene KNOWN OTTHUMG00000164856.1 240 240 1 ENSG00000203413.3 ACTBP6 chr8 84948585 84949674 + processed_pseudogene KNOWN OTTHUMG00000164632.2 1090 1090 1 ENSG00000253655.2 IGJP1 chr8 84980073 84980547 - processed_pseudogene KNOWN OTTHUMG00000164783.2 475 475 1 ENSG00000227950.1 RP11-312B8.2 chr1 6834333 6834618 - processed_pseudogene KNOWN OTTHUMG00000001214.1 286 286 1 ENSG00000281882.1 AL365361.1 chr1 110601750 110601863 + miRNA NOVEL NA 114 114 1 ENSG00000253283.1 RP11-146E23.2 chr8 85086615 85087186 + processed_pseudogene KNOWN OTTHUMG00000164633.1 572 572 1 ENSG00000133739.14 LRRCC1 chr8 85107147 85146076 + protein_coding KNOWN OTTHUMG00000164784.1 38930 5065 87 ENSG00000260493.1 RP11-219B4.7 chr8 85172077 85177062 - antisense NOVEL OTTHUMG00000174465.1 4986 1540 4 ENSG00000133740.9 E2F5 chr8 85177225 85217158 + protein_coding KNOWN OTTHUMG00000164785.5 39934 5928 51 ENSG00000254208.1 RP11-219B4.3 chr8 85177522 85178150 - antisense NOVEL OTTHUMG00000164786.1 629 468 2 ENSG00000176731.10 C8orf59 chr8 85214076 85220421 - protein_coding KNOWN OTTHUMG00000164787.8 6346 2514 44 ENSG00000185015.6 CA13 chr8 85220587 85284073 + protein_coding KNOWN OTTHUMG00000164940.1 63487 5528 25 ENSG00000258256.1 RP11-219B4.5 chr8 85222446 85245717 - antisense NOVEL OTTHUMG00000170116.1 23272 1256 6 ENSG00000257962.1 RP11-219B4.6 chr8 85246295 85249848 - antisense NOVEL OTTHUMG00000170117.1 3554 285 2 ENSG00000133742.12 CA1 chr8 85327608 85379014 - protein_coding KNOWN OTTHUMG00000164941.1 51407 4068 150 ENSG00000259834.1 RP11-284N8.3 chr1 110653560 110657040 - lincRNA NOVEL OTTHUMG00000175965.1 3481 3481 1 ENSG00000164879.6 CA3 chr8 85373436 85449040 + protein_coding KNOWN OTTHUMG00000164942.1 75605 2310 14 ENSG00000253549.4 RP11-317J10.2 chr8 85441851 85464915 - antisense NOVEL OTTHUMG00000164943.1 23065 1257 9 ENSG00000104267.8 CA2 chr8 85463852 85481493 + protein_coding KNOWN OTTHUMG00000164944.2 17642 2123 27 ENSG00000254380.1 RP11-317J10.4 chr8 85523899 85540511 + lincRNA NOVEL OTTHUMG00000164945.1 16613 677 3 ENSG00000253680.1 RP11-59O2.1 chr8 85617344 85617512 - processed_pseudogene KNOWN OTTHUMG00000164946.1 169 169 1 ENSG00000270971.2 REXO1L8P chr8 85642777 85646325 - processed_pseudogene KNOWN OTTHUMG00000184830.3 3549 1897 2 ENSG00000273567.1 REXO1L3P chr8 85654684 85658514 - processed_pseudogene KNOWN OTTHUMG00000185912.4 3831 1288 2 ENSG00000205176.3 REXO1L1P chr8 85656442 85663497 - transcribed_processed_pseudogene KNOWN OTTHUMG00000164949.4 7056 7056 2 ENSG00000276006.1 REXO1L12P chr8 85714922 85715833 + processed_pseudogene KNOWN OTTHUMG00000184581.3 912 912 1 ENSG00000275928.1 REXO1L11P chr8 85733459 85737286 + processed_pseudogene KNOWN OTTHUMG00000187502.2 3828 1311 2 ENSG00000177272.8 KCNA3 chr1 110672465 110675033 - protein_coding KNOWN OTTHUMG00000034493.1 2569 2569 1 ENSG00000276540.1 REXO1L10P chr8 85744543 85748373 - processed_pseudogene KNOWN OTTHUMG00000187503.3 3831 1290 2 ENSG00000271381.2 REXO1L9P chr8 85762909 85766931 - processed_pseudogene KNOWN OTTHUMG00000184804.3 4023 2108 2 ENSG00000276998.1 REXO1L2P chr8 85775106 85779090 - processed_pseudogene KNOWN OTTHUMG00000188058.1 3985 2069 2 ENSG00000274343.1 REXO1L7P chr8 85790382 85794399 - processed_pseudogene KNOWN OTTHUMG00000187500.2 4018 2099 2 ENSG00000270416.2 REXO1L12P chr8 85802574 85806435 - processed_pseudogene KNOWN OTTHUMG00000187498.2 3862 1937 2 ENSG00000277436.1 REXO1L5P chr8 85814767 85818783 - processed_pseudogene KNOWN OTTHUMG00000187497.2 4017 2098 2 ENSG00000277422.1 REXO1L6P chr8 85826865 85828467 - transcribed_processed_pseudogene KNOWN OTTHUMG00000184704.3 1603 1603 2 ENSG00000253154.1 CTA-392E5.1 chr8 85839705 85951083 + lincRNA NOVEL OTTHUMG00000163604.2 111379 813 6 ENSG00000147614.3 ATP6V0D2 chr8 85987323 86154228 + protein_coding KNOWN OTTHUMG00000163637.3 166906 3010 15 ENSG00000227753.3 RP11-216N21.1 chr8 86016819 86017126 + processed_pseudogene KNOWN OTTHUMG00000158662.1 308 308 1 ENSG00000199710.1 Y_RNA chr1 110764408 110764506 - misc_RNA NOVEL NA 99 99 1 ENSG00000243761.1 RP11-216N21.2 chr8 86043102 86043507 + processed_pseudogene KNOWN OTTHUMG00000158663.1 406 406 1 ENSG00000147613.6 PSKH2 chr8 86048373 86088621 - protein_coding KNOWN OTTHUMG00000163638.1 40249 1662 9 ENSG00000253675.1 CTD-3118D11.2 chr8 86098965 86154225 - antisense NOVEL OTTHUMG00000163648.2 55261 502 4 ENSG00000253699.1 CTD-3118D11.3 chr8 86180418 86212236 + antisense NOVEL OTTHUMG00000163662.1 31819 501 5 ENSG00000164893.7 SLC7A13 chr8 86214052 86321146 - protein_coding KNOWN OTTHUMG00000163663.1 107095 2246 13 ENSG00000254231.1 CTD-2284J15.1 chr8 86333274 86343314 - processed_transcript NOVEL OTTHUMG00000163689.1 10041 1673 6 ENSG00000123124.12 WWP1 chr8 86342738 86478420 + protein_coding KNOWN OTTHUMG00000163690.2 135683 6336 102 ENSG00000176623.10 RMDN1 chr8 86468257 86514357 - protein_coding KNOWN OTTHUMG00000163692.4 46101 5646 112 ENSG00000250569.1 NTAN1P2 chr8 86481754 86483002 - processed_pseudogene KNOWN OTTHUMG00000160478.1 1249 940 2 ENSG00000085719.10 CPNE3 chr8 86484830 86561498 + protein_coding KNOWN OTTHUMG00000163725.5 76669 6793 97 ENSG00000237415.2 NRBF2P3 chr1 110848077 110848941 - processed_pseudogene KNOWN OTTHUMG00000034490.2 865 865 1 ENSG00000254088.1 SLC2A3P4 chr8 86503591 86505061 + processed_pseudogene KNOWN OTTHUMG00000163721.1 1471 1471 1 ENSG00000170289.11 CNGB3 chr8 86553977 86743675 - protein_coding KNOWN OTTHUMG00000163738.2 189699 5025 26 ENSG00000253292.1 MIOXP1 chr8 86593755 86594589 - processed_pseudogene KNOWN OTTHUMG00000163739.1 835 835 1 ENSG00000205333.5 GOLGA2P1 chr8 86657388 86660293 - processed_pseudogene KNOWN OTTHUMG00000160480.2 2906 2906 1 ENSG00000221137.1 AC013751.1 chr8 86657870 86657952 - miRNA NOVEL NA 83 83 1 ENSG00000233915.4 UBE2Q2P10 chr8 86660525 86661922 - processed_pseudogene KNOWN OTTHUMG00000160482.2 1398 900 3 ENSG00000254115.1 RP11-386D6.1 chr8 86707547 86765023 + antisense NOVEL OTTHUMG00000163740.1 57477 804 3 ENSG00000253778.1 RP11-386D6.2 chr8 86765935 86818558 + lincRNA NOVEL OTTHUMG00000163741.1 52624 761 6 ENSG00000253568.1 RP11-386D6.3 chr8 86776479 86776638 - processed_pseudogene KNOWN OTTHUMG00000163742.1 160 160 1 ENSG00000176571.10 CNBD1 chr8 86866442 87615219 + protein_coding KNOWN OTTHUMG00000163743.5 748778 2584 42 ENSG00000232791.3 OR11I1P chr1 110853938 110854891 + unitary_pseudogene KNOWN OTTHUMG00000034579.1 954 954 1 ENSG00000253500.4 AF121898.3 chr8 87540835 87755718 - antisense NOVEL OTTHUMG00000163764.2 214884 2910 13 ENSG00000253401.1 VTA1P2 chr8 87575598 87576508 - processed_pseudogene KNOWN OTTHUMG00000163765.1 911 911 1 ENSG00000251563.1 IARS2P1 chr8 87598462 87601634 - processed_pseudogene KNOWN OTTHUMG00000160488.1 3173 3173 1 ENSG00000254376.2 SOX5P chr8 87788562 87789688 - processed_pseudogene KNOWN OTTHUMG00000163766.2 1127 1127 1 ENSG00000273978.1 CTB-118P15.3 chr8 87867601 87868607 + unprocessed_pseudogene KNOWN OTTHUMG00000187730.1 1007 1007 1 ENSG00000176566.4 DCAF4L2 chr8 87870743 87874068 - protein_coding KNOWN OTTHUMG00000163767.1 3326 3326 1 ENSG00000253171.1 CTB-118P15.2 chr8 87974165 88019113 + antisense NOVEL OTTHUMG00000163768.1 44949 647 6 ENSG00000156103.14 MMP16 chr8 88032009 88328025 - protein_coding KNOWN OTTHUMG00000163769.3 296017 12115 26 ENSG00000253553.4 RP11-586K2.1 chr8 88326836 88737134 + antisense NOVEL OTTHUMG00000163770.2 410299 3045 16 ENSG00000251904.1 RNA5SP272 chr8 88396437 88396547 - rRNA KNOWN NA 111 111 1 ENSG00000143119.11 CD53 chr1 110873154 110899928 + protein_coding KNOWN OTTHUMG00000048020.2 26775 2080 20 ENSG00000250962.1 RP11-69I13.1 chr8 88485110 88486094 + processed_pseudogene KNOWN OTTHUMG00000160420.1 985 856 2 ENSG00000278105.1 AC090578.1 chr8 88732497 88732594 + miRNA NOVEL NA 98 98 1 ENSG00000271156.1 RP11-642C5.1 chr8 88808318 88808908 - lincRNA NOVEL OTTHUMG00000185114.1 591 591 1 ENSG00000253621.1 RP11-255L13.1 chr8 89243401 89243793 - processed_pseudogene KNOWN OTTHUMG00000163773.1 393 393 1 ENSG00000248231.1 KRT8P4 chr8 89412621 89415071 - processed_pseudogene KNOWN OTTHUMG00000160489.1 2451 1454 2 ENSG00000251136.7 RP11-37B2.1 chr8 89609409 89757727 - lincRNA NOVEL OTTHUMG00000163788.3 148319 7481 30 ENSG00000104312.7 RIPK2 chr8 89757747 89791063 + protein_coding KNOWN OTTHUMG00000163809.2 33317 3117 26 ENSG00000253349.1 COX6B1P6 chr8 89823548 89823802 - processed_pseudogene KNOWN OTTHUMG00000163810.1 255 255 1 ENSG00000275103.1 SCb-64M4.1 chr8 89826593 89833564 + unprocessed_pseudogene KNOWN OTTHUMG00000187746.1 6972 361 3 ENSG00000207359.1 RNU6-925P chr8 89900721 89900824 - snRNA KNOWN NA 104 104 1 ENSG00000261654.1 RP11-96K19.4 chr1 110936369 110942353 - sense_overlapping NOVEL OTTHUMG00000175996.1 5985 5985 1 ENSG00000164823.8 OSGIN2 chr8 89901859 89927888 + protein_coding KNOWN OTTHUMG00000163811.1 26030 4681 17 ENSG00000104320.12 NBN chr8 89933336 90003228 - protein_coding KNOWN OTTHUMG00000153546.6 69893 6156 84 ENSG00000104325.5 DECR1 chr8 90001405 90052092 + protein_coding KNOWN OTTHUMG00000163829.2 50688 3507 117 ENSG00000104327.6 CALB1 chr8 90058608 90095475 - protein_coding KNOWN OTTHUMG00000134314.2 36868 7138 59 ENSG00000253394.4 LINC00534 chr8 90221488 90569318 + lincRNA NOVEL OTTHUMG00000163968.1 347831 1354 15 ENSG00000199354.1 RNA5SP273 chr8 90511128 90511240 + rRNA KNOWN NA 113 113 1 ENSG00000254180.1 AB015752.3 chr8 90534611 90620070 - lincRNA NOVEL OTTHUMG00000163969.1 85460 578 5 ENSG00000253799.1 LINC01030 chr8 90592804 90606065 - lincRNA NOVEL OTTHUMG00000163970.1 13262 738 3 ENSG00000180694.12 TMEM64 chr8 90621995 90791632 - protein_coding KNOWN OTTHUMG00000157185.4 169638 5870 25 ENSG00000246792.2 RP11-68L18.1 chr8 90646441 90656598 + antisense NOVEL OTTHUMG00000164007.1 10158 3808 7 ENSG00000232811.1 RP11-96K19.2 chr1 110943467 110952848 + antisense NOVEL OTTHUMG00000034494.1 9382 2359 2 ENSG00000254182.1 RP11-68L18.2 chr8 90701082 90701876 + processed_pseudogene KNOWN OTTHUMG00000164008.1 795 568 2 ENSG00000123119.10 NECAB1 chr8 90791550 90959408 + protein_coding KNOWN OTTHUMG00000164009.1 167859 6408 35 ENSG00000254251.1 RP11-662G23.1 chr8 90806474 90859240 - antisense NOVEL OTTHUMG00000164010.1 52767 833 4 ENSG00000253250.2 C8orf88 chr8 90958637 90985257 - protein_coding KNOWN OTTHUMG00000164011.2 26621 894 6 ENSG00000155099.6 TMEM55A chr8 90993796 91041064 - protein_coding KNOWN OTTHUMG00000164019.1 47269 3066 34 ENSG00000253358.1 GS1-251I9.3 chr8 91016588 91018655 + antisense NOVEL OTTHUMG00000164020.1 2068 398 2 ENSG00000254219.1 GS1-251I9.2 chr8 91042690 91044762 - processed_transcript NOVEL OTTHUMG00000164021.1 2073 616 5 ENSG00000253738.1 OTUD6B-AS1 chr8 91059909 91070189 - antisense NOVEL OTTHUMG00000164022.1 10281 6009 5 ENSG00000155100.9 OTUD6B chr8 91070196 91087095 + protein_coding KNOWN OTTHUMG00000150758.4 16900 3977 42 ENSG00000214954.7 LRRC69 chr8 91101832 91219236 + protein_coding KNOWN OTTHUMG00000164023.4 117405 3056 32 ENSG00000121931.14 LRIF1 chr1 110947185 110964079 - protein_coding KNOWN OTTHUMG00000011913.3 16895 3621 10 ENSG00000253525.1 CTD-2114J12.1 chr8 91157285 91158748 + processed_pseudogene KNOWN OTTHUMG00000164061.1 1464 1464 1 ENSG00000266194.1 MIR4661 chr8 91205485 91205559 + miRNA KNOWN NA 75 75 1 ENSG00000147606.7 SLC26A7 chr8 91209494 91398152 + protein_coding KNOWN OTTHUMG00000164062.1 188659 6273 144 ENSG00000253901.1 RP11-122C21.1 chr8 91542924 91907619 - lincRNA NOVEL OTTHUMG00000164063.1 364696 834 8 ENSG00000200151.1 RN7SKP231 chr8 91594965 91595241 + misc_RNA KNOWN NA 277 277 1 ENSG00000271202.1 PRR13P7 chr8 91909738 91910167 - processed_pseudogene KNOWN OTTHUMG00000184728.1 430 430 1 ENSG00000229182.3 MRPS16P1 chr8 91917507 91917918 + processed_pseudogene KNOWN OTTHUMG00000164065.2 412 412 1 ENSG00000079102.15 RUNX1T1 chr8 91954967 92103286 - protein_coding KNOWN OTTHUMG00000164066.5 148320 13535 323 ENSG00000253576.1 GS1-5L10.1 chr8 91975908 91977418 + antisense NOVEL OTTHUMG00000164152.1 1511 410 2 ENSG00000233778.3 RP11-777J24.1 chr8 92144088 92144435 - processed_pseudogene KNOWN OTTHUMG00000158664.1 348 348 1 ENSG00000237365.1 RP11-334N17.1 chr1 7008376 7014279 - antisense NOVEL OTTHUMG00000001215.2 5904 349 2 ENSG00000273010.1 RP11-96K19.5 chr1 110963302 110964649 + antisense NOVEL OTTHUMG00000186361.1 1348 1348 1 ENSG00000253118.1 RP11-700E23.3 chr8 92351912 92352148 - processed_pseudogene KNOWN OTTHUMG00000164153.1 237 237 1 ENSG00000253682.1 RP11-700E23.2 chr8 92403545 92413645 - lincRNA NOVEL OTTHUMG00000164154.1 10101 768 6 ENSG00000253749.1 RP11-700E23.1 chr8 92420850 92421798 - lincRNA NOVEL OTTHUMG00000164155.1 949 478 2 ENSG00000253371.1 RP11-587H10.1 chr8 92500583 92509816 - lincRNA NOVEL OTTHUMG00000164156.2 9234 614 3 ENSG00000253634.1 RP11-587H10.2 chr8 92565443 92655494 - lincRNA NOVEL OTTHUMG00000164157.1 90052 587 5 ENSG00000221172.1 AC091096.1 chr8 92635335 92635465 + miRNA NOVEL NA 131 131 1 ENSG00000253177.1 RP11-100L22.1 chr8 92668836 92679594 + lincRNA NOVEL OTTHUMG00000164158.1 10759 1013 4 ENSG00000248858.6 FLJ46284 chr8 92699742 92879502 - processed_transcript NOVEL OTTHUMG00000164159.1 179761 8071 11 ENSG00000254020.1 RP11-100L22.4 chr8 92723024 92725111 - lincRNA NOVEL OTTHUMG00000164160.1 2088 270 2 ENSG00000253577.1 RP11-100L22.3 chr8 92765702 92776451 + lincRNA NOVEL OTTHUMG00000164161.1 10750 436 3 ENSG00000225672.1 CCNT2P1 chr1 111007700 111015530 - processed_pseudogene KNOWN OTTHUMG00000034495.2 7831 1315 3 ENSG00000253197.4 CTD-3239E11.2 chr8 92882984 92965645 + antisense NOVEL OTTHUMG00000164195.1 82662 947 11 ENSG00000205133.10 TRIQK chr8 92883530 93017673 - protein_coding KNOWN OTTHUMG00000164162.3 134144 6724 102 ENSG00000251347.2 IRF5P1 chr8 92972575 92974738 + processed_pseudogene KNOWN OTTHUMG00000160421.2 2164 2164 1 ENSG00000277063.1 MIR8084 chr8 93029751 93029839 + miRNA KNOWN NA 89 89 1 ENSG00000279847.2 C8orf87 chr8 93134095 93166850 - lincRNA KNOWN OTTHUMG00000164196.1 32756 649 8 ENSG00000246662.5 LINC00535 chr8 93213302 93700433 - antisense NOVEL OTTHUMG00000164234.1 487132 2595 21 ENSG00000253960.1 RP11-388K12.1 chr8 93215925 93234878 - lincRNA NOVEL OTTHUMG00000164235.1 18954 532 4 ENSG00000268080.2 RP11-388K12.3 chr8 93229659 93229916 + processed_pseudogene KNOWN OTTHUMG00000187193.1 258 258 1 ENSG00000254089.1 RP11-388K12.2 chr8 93259667 93297976 + lincRNA NOVEL OTTHUMG00000164236.1 38310 261 3 ENSG00000222416.1 RNA5SP274 chr8 93441277 93441384 + rRNA KNOWN NA 108 108 1 ENSG00000252760.1 RNA5SP54 chr1 111041834 111041925 + rRNA KNOWN NA 92 92 1 ENSG00000253781.1 ZNF317P1 chr8 93646066 93647092 + processed_pseudogene KNOWN OTTHUMG00000164237.1 1027 1027 1 ENSG00000188343.11 FAM92A1 chr8 93698561 93731527 + protein_coding KNOWN OTTHUMG00000164238.4 32967 7423 122 ENSG00000271971.1 CTD-2006H14.2 chr8 93715378 93716113 - antisense NOVEL OTTHUMG00000185503.1 736 736 1 ENSG00000253854.1 RP11-10N23.2 chr8 93719574 93721167 + antisense NOVEL OTTHUMG00000164316.1 1594 939 2 ENSG00000183808.10 RBM12B chr8 93729356 93741017 - protein_coding KNOWN OTTHUMG00000164317.3 11662 7618 23 ENSG00000253722.1 RP11-10N23.4 chr8 93733216 93734022 + antisense NOVEL OTTHUMG00000164318.1 807 696 2 ENSG00000279331.1 RBM12B-AS1 chr8 93740121 93740773 + TEC KNOWN OTTHUMG00000187194.1 653 653 1 ENSG00000253848.1 RP11-10N23.5 chr8 93741193 93744534 + antisense NOVEL OTTHUMG00000164319.1 3342 530 2 ENSG00000164953.14 TMEM67 chr8 93754844 93819234 + protein_coding KNOWN OTTHUMG00000153119.3 64391 8281 206 ENSG00000254057.1 RP3-388N13.3 chr8 93834454 93846743 - lincRNA NOVEL OTTHUMG00000164354.1 12290 528 2 ENSG00000156171.13 DRAM2 chr1 111117333 111140216 - protein_coding KNOWN OTTHUMG00000011911.6 22884 3138 74 ENSG00000254387.1 RP3-388N13.2 chr8 93849561 93850075 + processed_pseudogene KNOWN OTTHUMG00000164355.2 515 515 1 ENSG00000164951.14 PDP1 chr8 93857807 93926066 + protein_coding KNOWN OTTHUMG00000164356.2 68260 5603 25 ENSG00000264448.3 RP3-388N13.5 chr8 93915734 93916682 - lincRNA NOVEL OTTHUMG00000185504.1 949 949 1 ENSG00000276513.1 MIR378D2 chr8 93916022 93916119 - miRNA KNOWN NA 98 98 1 ENSG00000251234.1 PSMA2P2 chr8 93939364 93942877 - processed_pseudogene KNOWN OTTHUMG00000160491.1 3514 686 3 ENSG00000240509.1 RPL34P18 chr8 93957338 93957691 - processed_pseudogene KNOWN OTTHUMG00000158665.1 354 354 1 ENSG00000263855.1 AC105081.1 chr8 93973854 93973923 + miRNA NOVEL NA 70 70 1 ENSG00000275386.1 CTC-788C1.2 chr8 93974671 93974776 - unprocessed_pseudogene KNOWN OTTHUMG00000187747.1 106 106 1 ENSG00000253585.1 KB-1184D12.1 chr8 94097764 94104322 - lincRNA NOVEL OTTHUMG00000164390.1 6559 668 3 ENSG00000079112.8 CDH17 chr8 94127171 94217303 - protein_coding KNOWN OTTHUMG00000164391.1 90133 3901 60 ENSG00000134255.12 CEPT1 chr1 111139627 111185102 + protein_coding KNOWN OTTHUMG00000012357.4 45476 8413 69 ENSG00000249510.1 KB-1247B1.1 chr8 94201913 94203052 - processed_pseudogene KNOWN OTTHUMG00000160493.1 1140 833 2 ENSG00000164949.6 GEM chr8 94249253 94262350 - protein_coding KNOWN OTTHUMG00000164392.1 13098 2648 16 ENSG00000244217.1 RPS4XP10 chr8 94352923 94353653 + processed_pseudogene KNOWN OTTHUMG00000158666.1 731 731 1 ENSG00000197275.11 RAD54B chr8 94371960 94475109 - protein_coding KNOWN OTTHUMG00000133658.5 103150 5763 57 ENSG00000265817.1 FSBP chr8 94378377 94436952 - protein_coding KNOWN OTTHUMG00000178341.1 58576 3182 14 ENSG00000280123.1 RP11-267M23.1 chr8 94427712 94429888 - TEC KNOWN OTTHUMG00000164425.1 2177 2177 1 ENSG00000164944.10 KIAA1429 chr8 94487693 94553529 - protein_coding KNOWN OTTHUMG00000164426.2 65837 10771 78 ENSG00000254315.1 RP11-267M23.3 chr8 94533628 94534391 + antisense NOVEL OTTHUMG00000164452.1 764 491 2 ENSG00000253704.1 RP11-267M23.4 chr8 94553722 94569745 + lincRNA NOVEL OTTHUMG00000164453.1 16024 1789 2 ENSG00000253175.1 RP11-267M23.6 chr8 94565036 94565715 + processed_pseudogene KNOWN OTTHUMG00000164454.1 680 375 2 ENSG00000272982.1 RP5-1180E21.4 chr1 111181374 111181491 - antisense NOVEL OTTHUMG00000186362.1 118 118 1 ENSG00000254190.1 RP11-267M23.5 chr8 94590115 94590259 + processed_pseudogene KNOWN OTTHUMG00000164455.1 145 145 1 ENSG00000254283.1 RP11-267M23.7 chr8 94594411 94594601 + processed_pseudogene KNOWN OTTHUMG00000164456.1 191 191 1 ENSG00000261437.1 RP11-22C11.2 chr8 94637285 94639467 - antisense NOVEL OTTHUMG00000173368.1 2183 2183 1 ENSG00000104413.14 ESRP1 chr8 94641074 94707466 + protein_coding KNOWN OTTHUMG00000164587.1 66393 4875 100 ENSG00000274701.1 Metazoa_SRP chr8 94655911 94656208 + misc_RNA NOVEL NA 298 298 1 ENSG00000241003.1 RP11-22C11.1 chr8 94688228 94688610 + processed_pseudogene KNOWN OTTHUMG00000158667.1 383 383 1 ENSG00000253429.1 KB-1090H4.2 chr8 94708952 94709244 - processed_pseudogene KNOWN OTTHUMG00000164588.1 293 293 1 ENSG00000199701.1 Y_RNA chr8 94713715 94713812 - misc_RNA NOVEL NA 98 98 1 ENSG00000156162.15 DPY19L4 chr8 94719703 94793836 + protein_coding KNOWN OTTHUMG00000164589.2 74134 7136 53 ENSG00000254307.2 KB-1608C10.2 chr8 94791643 94793106 - antisense NOVEL OTTHUMG00000164590.1 1464 1091 4 ENSG00000273221.1 RP5-1180E21.5 chr1 111184415 111185061 - antisense NOVEL OTTHUMG00000186363.1 647 647 1 ENSG00000164941.12 INTS8 chr8 94813311 94881746 + protein_coding KNOWN OTTHUMG00000164695.2 68436 7866 212 ENSG00000175305.15 CCNE2 chr8 94879770 94896678 - protein_coding KNOWN OTTHUMG00000164696.1 16909 4397 73 ENSG00000272509.1 RP11-347C18.5 chr8 94884609 94885070 + antisense NOVEL OTTHUMG00000185506.1 462 462 1 ENSG00000243979.2 RP11-347C18.1 chr8 94891239 94892107 + processed_pseudogene KNOWN OTTHUMG00000160422.1 869 558 2 ENSG00000156170.11 NDUFAF6 chr8 94895767 95116455 + protein_coding KNOWN OTTHUMG00000150173.4 220689 6406 136 ENSG00000164938.12 TP53INP1 chr8 94925972 94949411 - protein_coding KNOWN OTTHUMG00000164697.1 23440 5676 9 ENSG00000253878.4 RP11-347C18.3 chr8 94950037 94951396 + sense_intronic NOVEL OTTHUMG00000164729.1 1360 709 6 ENSG00000253528.2 RP11-347C18.4 chr8 94974573 94974853 - processed_pseudogene KNOWN OTTHUMG00000164730.2 281 281 1 ENSG00000200525.1 RNU6-1209P chr8 95055214 95055320 + snRNA KNOWN NA 107 107 1 ENSG00000245080.5 RP11-320N21.1 chr8 95066808 95073182 - antisense NOVEL OTTHUMG00000164658.3 6375 2886 4 ENSG00000162777.15 DENND2D chr1 111187174 111204535 - protein_coding KNOWN OTTHUMG00000012356.2 17362 5515 53 ENSG00000254248.1 RP11-320N21.2 chr8 95071732 95087924 - antisense NOVEL OTTHUMG00000164704.1 16193 794 4 ENSG00000275241.1 MIR3150A chr8 95072911 95072996 - miRNA KNOWN NA 86 86 1 ENSG00000175895.3 PLEKHF2 chr8 95133804 95156684 + protein_coding KNOWN OTTHUMG00000164660.1 22881 3137 4 ENSG00000253773.2 C8orf37-AS1 chr8 95204456 95810136 + lincRNA NOVEL OTTHUMG00000164661.1 605681 1445 15 ENSG00000253351.1 LINC01298 chr8 95207007 95216374 - lincRNA NOVEL OTTHUMG00000164662.1 9368 519 3 ENSG00000156172.5 C8orf37 chr8 95244919 95269201 - protein_coding KNOWN OTTHUMG00000164663.1 24283 3334 6 ENSG00000281115.1 AC024995.1 chr8 95269616 95269738 - miRNA NOVEL NA 123 123 1 ENSG00000253945.1 RP11-328L11.1 chr8 95403802 95403894 + processed_pseudogene KNOWN OTTHUMG00000164664.1 93 93 1 ENSG00000253872.1 RP11-90D11.1 chr8 95505406 95527524 + lincRNA NOVEL OTTHUMG00000164665.1 22119 2125 5 ENSG00000202112.1 RNU6-690P chr8 95599114 95599219 + snRNA KNOWN NA 106 106 1 ENSG00000064886.12 CHI3L2 chr1 111200771 111243440 + protein_coding KNOWN OTTHUMG00000012174.7 42670 3295 114 ENSG00000223297.1 AC116154.1 chr8 95678838 95678915 - miRNA NOVEL NA 78 78 1 ENSG00000254079.1 RP11-31K23.1 chr8 95947781 95948233 - processed_pseudogene KNOWN OTTHUMG00000164666.1 453 453 1 ENSG00000248762.2 RP11-31K23.2 chr8 95986108 95993103 - lincRNA NOVEL OTTHUMG00000164667.1 6996 941 2 ENSG00000183663.6 RP11-44N17.1 chr8 96068729 96069681 - processed_pseudogene KNOWN OTTHUMG00000159992.1 953 953 1 ENSG00000271349.1 RP11-44N17.2 chr8 96126967 96127801 - processed_pseudogene KNOWN OTTHUMG00000184720.1 835 835 1 ENSG00000270131.1 KB-1043D8.8 chr8 96140572 96140944 - lincRNA NOVEL OTTHUMG00000184134.1 373 373 1 ENSG00000156466.9 GDF6 chr8 96142330 96160792 - protein_coding KNOWN OTTHUMG00000164710.3 18463 3701 9 ENSG00000156467.8 UQCRB chr8 96225920 96235634 - protein_coding KNOWN OTTHUMG00000164711.2 9715 9715 35 ENSG00000254224.1 KB-1043D8.6 chr8 96235427 96238034 + antisense NOVEL OTTHUMG00000164712.1 2608 382 3 ENSG00000156469.7 MTERF3 chr8 96239398 96261610 - protein_coding KNOWN OTTHUMG00000164713.1 22213 1801 31 ENSG00000236040.1 CHIAP1 chr1 111250254 111256715 + unprocessed_pseudogene KNOWN OTTHUMG00000034492.1 6462 995 8 ENSG00000156471.11 PTDSS1 chr8 96261715 96336995 + protein_coding KNOWN OTTHUMG00000164687.2 75281 6295 46 ENSG00000199732.1 Y_RNA chr8 96309221 96309322 - misc_RNA NOVEL NA 102 102 1 ENSG00000253105.4 KB-1448A5.1 chr8 96371865 96387438 - lincRNA NOVEL OTTHUMG00000164715.1 15574 1046 6 ENSG00000202095.1 RNU6-1172P chr8 96431054 96431160 - snRNA KNOWN NA 107 107 1 ENSG00000169439.10 SDC2 chr8 96493351 96611780 + protein_coding KNOWN OTTHUMG00000164689.4 118430 4536 35 ENSG00000104324.14 CPQ chr8 96645227 97149654 + protein_coding KNOWN OTTHUMG00000164690.3 504428 3457 32 ENSG00000272249.1 KB-1958F4.2 chr8 97132835 97133379 - antisense NOVEL OTTHUMG00000185508.1 545 545 1 ENSG00000270077.1 KB-1958F4.1 chr8 97144170 97144723 + sense_intronic NOVEL OTTHUMG00000184092.1 554 554 1 ENSG00000260640.1 KB-1000E4.2 chr8 97241742 97242204 - lincRNA NOVEL OTTHUMG00000174460.1 463 463 1 ENSG00000180543.4 TSPYL5 chr8 97273474 97277964 - protein_coding KNOWN OTTHUMG00000164857.2 4491 4491 1 ENSG00000236743.1 RP5-857K21.15 chr1 357383 359681 - lincRNA NOVEL OTTHUMG00000156971.1 2299 676 3 ENSG00000207056.1 RNU1-8P chr1 7219360 7219524 + snRNA KNOWN NA 165 165 1 ENSG00000203878.10 CHIAP2 chr1 111280059 111286116 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000012173.6 6058 2837 31 ENSG00000207215.2 U3 chr8 97358265 97358478 + snoRNA NOVEL NA 214 214 1 ENSG00000213750.4 KB-1683C8.1 chr8 97624203 97625079 - processed_pseudogene KNOWN OTTHUMG00000158668.1 877 877 1 ENSG00000147649.8 MTDH chr8 97644179 97728770 + protein_coding KNOWN OTTHUMG00000164692.4 84592 6391 42 ENSG00000202399.1 Y_RNA chr8 97772313 97772425 + misc_RNA NOVEL NA 113 113 1 ENSG00000104341.15 LAPTM4B chr8 97775057 97853013 + protein_coding KNOWN OTTHUMG00000164740.3 77957 3197 26 ENSG00000270682.1 KB-1907C4.2 chr8 97788210 97788357 - processed_pseudogene KNOWN OTTHUMG00000184717.1 148 148 1 ENSG00000270861.1 KB-1589B1.4 chr8 97853021 97853253 - processed_pseudogene KNOWN OTTHUMG00000184709.1 233 233 1 ENSG00000253639.1 SUMO2P18 chr8 97858049 97858947 - processed_pseudogene KNOWN OTTHUMG00000164741.1 899 252 4 ENSG00000243504.1 RPS23P1 chr8 97865054 97865485 + processed_pseudogene KNOWN OTTHUMG00000158669.1 432 432 1 ENSG00000132561.12 MATN2 chr8 97868840 98036716 + protein_coding KNOWN OTTHUMG00000164795.2 167877 6933 162 ENSG00000134216.17 CHIA chr1 111290862 111320566 + protein_coding KNOWN OTTHUMG00000011165.2 29705 4632 97 ENSG00000156482.9 RPL30 chr8 98024851 98046469 - protein_coding KNOWN OTTHUMG00000164796.3 21619 4027 46 ENSG00000245970.2 KB-1208A12.3 chr8 98041726 98044121 + antisense NOVEL OTTHUMG00000164797.1 2396 1989 2 ENSG00000207067.1 SNORA72 chr8 98042086 98042217 - snoRNA KNOWN NA 132 132 1 ENSG00000252755.1 RNU6-703P chr8 98048856 98048962 + snRNA KNOWN NA 107 107 1 ENSG00000177459.9 ERICH5 chr8 98064311 98093610 + protein_coding KNOWN OTTHUMG00000164819.1 29300 1761 5 ENSG00000132541.9 HRSP12 chr8 98102344 98117241 - protein_coding KNOWN OTTHUMG00000164670.4 14898 1567 29 ENSG00000104356.9 POP1 chr8 98117297 98159834 + protein_coding KNOWN OTTHUMG00000164635.1 42538 4852 39 ENSG00000104361.8 NIPAL2 chr8 98189833 98294393 - protein_coding KNOWN OTTHUMG00000164668.2 104561 5599 50 ENSG00000252558.1 RNU6-914P chr8 98192205 98192313 - snRNA KNOWN NA 109 109 1 ENSG00000254267.1 KB-1458E12.1 chr8 98371355 98388247 - lincRNA NOVEL OTTHUMG00000164655.1 16893 435 3 ENSG00000229283.1 RP5-1125M8.2 chr1 111317600 111323981 - antisense NOVEL OTTHUMG00000011166.1 6382 476 2 ENSG00000278914.1 KB-1517D11.3 chr8 98391401 98391514 - TEC KNOWN OTTHUMG00000173494.1 114 114 1 ENSG00000104375.14 STK3 chr8 98401403 98942827 - protein_coding KNOWN OTTHUMG00000164651.6 541425 11906 92 ENSG00000253468.1 KB-1517D11.2 chr8 98412882 98413784 - processed_pseudogene KNOWN OTTHUMG00000164650.4 903 587 2 ENSG00000156486.7 KCNS2 chr8 98427022 98432848 + protein_coding KNOWN OTTHUMG00000044337.3 5827 5348 4 ENSG00000272321.1 KB-1517D11.4 chr8 98436669 98439290 + antisense NOVEL OTTHUMG00000185509.1 2622 2622 1 ENSG00000207378.1 RNU6-748P chr8 98462944 98463050 - snRNA KNOWN NA 107 107 1 ENSG00000253911.1 KB-1205A7.2 chr8 98603253 98606340 + antisense NOVEL OTTHUMG00000164864.1 3088 301 2 ENSG00000254112.1 KB-1205A7.1 chr8 98633547 98633865 + processed_pseudogene KNOWN OTTHUMG00000164639.2 319 319 1 ENSG00000240870.2 RPL19P14 chr8 98782055 98782628 + processed_pseudogene KNOWN OTTHUMG00000158670.2 574 574 1 ENSG00000253415.1 RP11-44N12.4 chr8 98904603 98905671 - processed_pseudogene KNOWN OTTHUMG00000164652.3 1069 1069 1 ENSG00000232240.2 RP5-1125M8.3 chr1 111323833 111324075 + processed_pseudogene KNOWN OTTHUMG00000011167.2 243 243 1 ENSG00000254312.1 MRPL57P7 chr8 98906260 98906517 - processed_pseudogene KNOWN OTTHUMG00000164653.2 258 258 1 ENSG00000223281.1 RN7SKP85 chr8 98921233 98921550 - misc_RNA KNOWN NA 318 318 1 ENSG00000271930.1 RP11-44N12.5 chr8 98943595 98944098 + lincRNA NOVEL OTTHUMG00000185510.1 504 504 1 ENSG00000164920.8 OSR2 chr8 98944403 98952104 + protein_coding KNOWN OTTHUMG00000164640.3 7702 2930 31 ENSG00000229625.3 RP11-44N12.2 chr8 98961428 98968284 + lincRNA NOVEL OTTHUMG00000164654.1 6857 464 3 ENSG00000253948.1 RP11-410L14.2 chr8 98996763 99013044 - lincRNA NOVEL OTTHUMG00000164865.1 16282 380 2 ENSG00000263842.1 AC104986.1 chr8 98999284 98999401 + miRNA NOVEL NA 118 118 1 ENSG00000253180.1 RP11-410L14.1 chr8 99003407 99003842 - processed_pseudogene KNOWN OTTHUMG00000164698.2 436 436 1 ENSG00000132549.17 VPS13B chr8 99013266 99877580 + protein_coding KNOWN OTTHUMG00000140383.2 864315 16716 209 ENSG00000253562.1 CTD-2340D6.2 chr8 99091738 99094060 - antisense NOVEL OTTHUMG00000164699.1 2323 493 2 ENSG00000173947.12 PIFO chr1 111346288 111353013 + protein_coding KNOWN OTTHUMG00000011168.1 6726 4261 19 ENSG00000253532.1 CTD-2340D6.1 chr8 99119352 99120581 + sense_intronic NOVEL OTTHUMG00000164700.1 1230 595 2 ENSG00000236583.1 AP004290.1 chr8 99233048 99234459 - processed_pseudogene KNOWN OTTHUMG00000140386.1 1412 1412 1 ENSG00000237704.1 AP004289.2 chr8 99340305 99341761 - processed_pseudogene KNOWN OTTHUMG00000140384.1 1457 1457 1 ENSG00000225017.1 AP004289.1 chr8 99346052 99348256 - processed_pseudogene KNOWN OTTHUMG00000140387.1 2205 2205 1 ENSG00000206699.1 Y_RNA chr8 99527826 99527927 + misc_RNA NOVEL NA 102 102 1 ENSG00000207804.1 MIR599 chr8 99536636 99536730 - miRNA KNOWN NA 95 95 1 ENSG00000216069.1 MIR875 chr8 99536786 99536861 - miRNA KNOWN NA 76 76 1 ENSG00000243254.3 RN7SL350P chr8 99613783 99614081 - misc_RNA KNOWN NA 299 299 1 ENSG00000235683.1 AC018442.1 chr8 99695957 99698017 + processed_pseudogene KNOWN OTTHUMG00000140385.1 2061 2061 1 ENSG00000253539.1 RP11-402L5.1 chr8 99796615 99799187 - antisense NOVEL OTTHUMG00000164701.1 2573 648 2 ENSG00000234020.1 CHIAP3 chr1 111353275 111367409 - unprocessed_pseudogene KNOWN OTTHUMG00000011169.1 14135 1133 9 ENSG00000253912.1 RP11-402L5.2 chr8 99804159 99804341 - processed_pseudogene KNOWN OTTHUMG00000164702.1 183 183 1 ENSG00000164919.9 COX6C chr8 99873200 99894062 - protein_coding KNOWN OTTHUMG00000164703.4 20863 3066 42 ENSG00000132554.18 RGS22 chr8 99960936 100131268 - protein_coding KNOWN OTTHUMG00000164802.5 170333 6363 206 ENSG00000212414.1 SNORD77 chr8 100004583 100004649 + snoRNA NOVEL NA 67 67 1 ENSG00000221753.1 MIR1273A chr8 100023982 100024084 - miRNA KNOWN NA 103 103 1 ENSG00000156509.12 FBXO43 chr8 100133360 100145800 - protein_coding KNOWN OTTHUMG00000164803.2 12441 3950 13 ENSG00000147669.9 POLR2K chr8 100150584 100154002 + protein_coding KNOWN OTTHUMG00000164705.3 3419 1711 10 ENSG00000104450.11 SPAG1 chr8 100157906 100259278 + protein_coding KNOWN OTTHUMG00000164706.3 101373 5055 66 ENSG00000202310.1 Y_RNA chr8 100158868 100158975 + misc_RNA NOVEL NA 108 108 1 ENSG00000253299.1 RP11-316J7.4 chr8 100165226 100165478 - processed_pseudogene KNOWN OTTHUMG00000164872.1 253 253 1 ENSG00000236012.2 HIGD1AP12 chr1 111380291 111380571 + processed_pseudogene KNOWN OTTHUMG00000011170.2 281 281 1 ENSG00000199667.1 Y_RNA chr8 100185138 100185239 + misc_RNA NOVEL NA 102 102 1 ENSG00000034677.10 RNF19A chr8 100257059 100410015 - protein_coding KNOWN OTTHUMG00000164707.5 152957 6049 71 ENSG00000253217.1 KB-1991G8.1 chr8 100337595 100350707 + lincRNA NOVEL OTTHUMG00000164738.1 13113 546 2 ENSG00000253824.1 KB-173C10.2 chr8 100381260 100414459 - lincRNA NOVEL OTTHUMG00000164708.1 33200 838 6 ENSG00000265599.1 MIR4471 chr8 100382763 100382845 + miRNA KNOWN NA 83 83 1 ENSG00000253842.1 KB-173C10.1 chr8 100428834 100430997 - lincRNA NOVEL OTTHUMG00000164709.1 2164 743 4 ENSG00000253666.1 KB-1615E4.2 chr8 100475675 100501148 + antisense NOVEL OTTHUMG00000164722.1 25474 742 4 ENSG00000254364.1 KB-1615E4.3 chr8 100492528 100493713 + antisense NOVEL OTTHUMG00000164723.1 1186 233 2 ENSG00000186106.10 ANKRD46 chr8 100509752 100559784 - protein_coding KNOWN OTTHUMG00000164724.1 50033 5820 43 ENSG00000251013.1 GAPDHP62 chr8 100550724 100551713 - processed_pseudogene KNOWN OTTHUMG00000159995.1 990 990 1 ENSG00000227179.5 PGCP1 chr1 111382860 111391819 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000011171.2 8960 1358 14 ENSG00000174226.7 SNX31 chr8 100572882 100663415 - protein_coding KNOWN OTTHUMG00000164725.3 90534 3149 46 ENSG00000253740.4 KB-1083B1.1 chr8 100618581 100619993 + antisense NOVEL OTTHUMG00000164778.1 1413 449 6 ENSG00000252764.1 RNU6-1092P chr8 100683488 100683574 + snRNA KNOWN NA 87 87 1 ENSG00000070756.12 PABPC1 chr8 100685816 100722809 - protein_coding KNOWN OTTHUMG00000164779.1 36994 4752 146 ENSG00000277719.1 MIR7705 chr8 100702968 100703024 - miRNA KNOWN NA 57 57 1 ENSG00000264991.1 AP001205.1 chr8 100707878 100707963 - miRNA NOVEL NA 86 86 1 ENSG00000221527.1 RNU6ATAC41P chr8 100739802 100739927 - snRNA KNOWN NA 126 126 1 ENSG00000202001.2 Y_RNA chr8 100755099 100755195 - misc_RNA NOVEL NA 97 97 1 ENSG00000242399.1 RPS20P23 chr8 100776512 100776865 - processed_pseudogene KNOWN OTTHUMG00000158672.2 354 354 1 ENSG00000222795.1 RNU4-83P chr8 100831728 100831860 - snRNA KNOWN NA 133 133 1 ENSG00000085465.12 OVGP1 chr1 111414314 111427777 - protein_coding KNOWN OTTHUMG00000011746.1 13464 2567 16 ENSG00000212994.5 RPS26P6 chr8 100895771 100896118 + processed_pseudogene KNOWN OTTHUMG00000158673.1 348 348 1 ENSG00000275041.1 Metazoa_SRP chr8 100897853 100898136 - misc_RNA NOVEL NA 284 284 1 ENSG00000260368.1 RP11-521I2.3 chr8 100913247 100914388 - sense_overlapping NOVEL OTTHUMG00000172766.2 1142 1142 1 ENSG00000164924.16 YWHAZ chr8 100916525 100953388 - protein_coding KNOWN OTTHUMG00000134291.5 36864 8555 111 ENSG00000242315.3 RN7SL685P chr8 100957883 100958180 + misc_RNA KNOWN NA 298 298 1 ENSG00000248599.1 FLJ42969 chr8 101052054 101076251 + lincRNA NOVEL OTTHUMG00000164780.1 24198 1948 3 ENSG00000253395.1 KB-1460A1.1 chr8 101122145 101126158 - lincRNA NOVEL OTTHUMG00000164820.1 4014 430 3 ENSG00000253355.1 KB-1460A1.2 chr8 101128987 101133486 + processed_transcript NOVEL OTTHUMG00000164821.1 4500 602 5 ENSG00000202360.1 RN7SKP249 chr8 101137959 101138313 + misc_RNA KNOWN NA 355 355 1 ENSG00000253737.1 KB-1460A1.3 chr8 101139665 101140929 + lincRNA NOVEL OTTHUMG00000164822.1 1265 473 3 ENSG00000260948.1 RP11-552M11.8 chr1 111431046 111433068 - sense_overlapping NOVEL OTTHUMG00000176034.1 2023 2023 1 ENSG00000261087.1 KB-1460A1.5 chr8 101166805 101169629 - lincRNA NOVEL OTTHUMG00000173422.1 2825 2825 1 ENSG00000120963.10 ZNF706 chr8 101177878 101206193 - protein_coding KNOWN OTTHUMG00000164823.1 28316 7393 55 ENSG00000271882.1 KB-1410C5.5 chr8 101208148 101208558 + lincRNA NOVEL OTTHUMG00000185511.1 411 411 1 ENSG00000253942.1 KB-1410C5.1 chr8 101223941 101224573 - processed_pseudogene KNOWN OTTHUMG00000164824.1 633 633 1 ENSG00000253679.1 KB-1410C5.2 chr8 101261541 101262903 - lincRNA NOVEL OTTHUMG00000164827.1 1363 979 2 ENSG00000253282.1 KB-1410C5.3 chr8 101287445 101293783 + lincRNA NOVEL OTTHUMG00000164828.1 6339 731 3 ENSG00000239115.1 RNU7-67P chr8 101307367 101307428 + snRNA KNOWN NA 62 62 1 ENSG00000271560.1 KB-1410C5.4 chr8 101337496 101337649 + processed_pseudogene KNOWN OTTHUMG00000184694.1 154 154 1 ENSG00000228224.3 NACAP1 chr8 101361794 101372707 + transcribed_processed_pseudogene KNOWN OTTHUMG00000164829.1 10914 1555 5 ENSG00000254063.2 DUXAP2 chr8 101366417 101367005 - unprocessed_pseudogene KNOWN OTTHUMG00000164830.2 589 589 1 ENSG00000280801.1 Z98052.1 chr1 7264193 7264277 + miRNA NOVEL NA 85 85 1 ENSG00000233337.1 UBE2FP3 chr1 111437514 111438037 + processed_pseudogene KNOWN OTTHUMG00000011747.1 524 524 1 ENSG00000253644.1 KB-1930G5.3 chr8 101387299 101393186 - lincRNA NOVEL OTTHUMG00000164831.1 5888 408 3 ENSG00000239211.3 RN7SL563P chr8 101397636 101397933 - misc_RNA KNOWN NA 298 298 1 ENSG00000254084.1 KB-1930G5.4 chr8 101411873 101452452 - lincRNA NOVEL OTTHUMG00000164832.1 40580 578 2 ENSG00000254024.1 KB-1562D12.1 chr8 101461177 101492499 - antisense NOVEL OTTHUMG00000164833.1 31323 491 2 ENSG00000083307.9 GRHL2 chr8 101492432 101669726 + protein_coding KNOWN OTTHUMG00000149915.2 177295 6060 44 ENSG00000253991.1 KB-1562D12.2 chr8 101528723 101529569 - processed_pseudogene KNOWN OTTHUMG00000164834.2 847 539 2 ENSG00000253153.1 KB-1562D12.3 chr8 101562008 101562488 - processed_pseudogene KNOWN OTTHUMG00000164835.2 481 481 1 ENSG00000104490.16 NCALD chr8 101686543 102124907 - protein_coding KNOWN OTTHUMG00000164876.6 438365 8042 128 ENSG00000253629.1 KB-1107E3.1 chr8 101686547 101689093 + antisense NOVEL OTTHUMG00000164875.1 2547 361 2 ENSG00000238372.1 snoU13 chr8 101847256 101847360 - snoRNA NOVEL NA 105 105 1 ENSG00000243960.1 RP11-552M11.4 chr1 111438638 111441364 - sense_overlapping NOVEL OTTHUMG00000011749.1 2727 861 4 ENSG00000266756.1 MIR5680 chr8 102125432 102125515 + miRNA KNOWN NA 84 84 1 ENSG00000254492.1 KB-1073A2.1 chr8 102154550 102154725 + processed_pseudogene KNOWN OTTHUMG00000165620.1 176 176 1 ENSG00000048392.10 RRM2B chr8 102204502 102239118 - protein_coding KNOWN OTTHUMG00000164776.5 34617 5548 61 ENSG00000246263.2 KB-431C1.4 chr8 102239394 102253333 + antisense NOVEL OTTHUMG00000164878.1 13940 2355 5 ENSG00000253328.2 SUMO2P19 chr8 102242040 102242619 - unprocessed_pseudogene KNOWN OTTHUMG00000164794.3 580 295 2 ENSG00000104517.11 UBR5 chr8 102253012 102412841 - protein_coding KNOWN OTTHUMG00000164755.3 159830 13085 224 ENSG00000272037.1 KB-431C1.5 chr8 102256392 102257821 + antisense NOVEL OTTHUMG00000185512.1 1430 1430 1 ENSG00000253923.2 KB-1980E6.2 chr8 102417979 102418953 + processed_pseudogene KNOWN OTTHUMG00000164718.3 975 975 1 ENSG00000221387.1 RNU6ATAC8P chr8 102421197 102421322 + snRNA KNOWN NA 126 126 1 ENSG00000271612.1 HSPE1P14 chr8 102451763 102452483 + processed_pseudogene KNOWN OTTHUMG00000184578.1 721 302 2 ENSG00000116455.12 WDR77 chr1 111439890 111449376 - protein_coding KNOWN OTTHUMG00000011748.2 9487 2805 34 ENSG00000240724.2 RPS12P15 chr8 102503753 102504137 + processed_pseudogene KNOWN OTTHUMG00000158675.3 385 385 1 ENSG00000274329.1 AP002852.1 chr8 102521867 102521977 + miRNA NOVEL NA 111 111 1 ENSG00000253633.1 KB-1980E6.3 chr8 102528740 102538668 + lincRNA NOVEL OTTHUMG00000164777.1 9929 1231 6 ENSG00000252593.1 RNU6-1224P chr8 102533241 102533339 - snRNA KNOWN NA 99 99 1 ENSG00000155087.3 ODF1 chr8 102551572 102561017 + protein_coding KNOWN OTTHUMG00000164719.2 9446 1042 4 ENSG00000253382.3 POU5F1P2 chr8 102621509 102622331 - processed_pseudogene KNOWN OTTHUMG00000164734.5 823 823 1 ENSG00000155090.13 KLF10 chr8 102648779 102655902 - protein_coding KNOWN OTTHUMG00000164735.1 7124 4003 8 ENSG00000250684.4 KB-1042C11.1 chr8 102688317 102688906 - processed_pseudogene KNOWN OTTHUMG00000160496.4 590 429 2 ENSG00000266799.1 AP003356.1 chr8 102733635 102733719 - miRNA NOVEL NA 85 85 1 ENSG00000253669.3 KB-1732A1.1 chr8 102805517 102809971 + lincRNA NOVEL OTTHUMG00000164736.2 4455 2829 4 ENSG00000199890.1 Y_RNA chr1 111446798 111446908 + misc_RNA NOVEL NA 111 111 1 ENSG00000155096.12 AZIN1 chr8 102826357 102893864 - protein_coding KNOWN OTTHUMG00000164766.6 67508 6426 59 ENSG00000253385.1 KB-1254G8.1 chr8 102854455 102856075 + lincRNA NOVEL OTTHUMG00000164839.1 1621 770 2 ENSG00000253320.4 KB-1507C5.2 chr8 102864300 102977876 + antisense NOVEL OTTHUMG00000164825.2 113577 3695 46 ENSG00000253263.1 KB-1507C5.3 chr8 102891876 102893608 + lincRNA NOVEL OTTHUMG00000164836.1 1733 533 2 ENSG00000244052.1 RPL5P24 chr8 102923371 102924255 - processed_pseudogene KNOWN OTTHUMG00000158676.1 885 885 1 ENSG00000201216.1 Y_RNA chr8 102950467 102950564 - misc_RNA NOVEL NA 98 98 1 ENSG00000265898.1 AP003354.1 chr8 102960813 102960920 - miRNA NOVEL NA 108 108 1 ENSG00000254281.1 KB-1507C5.4 chr8 102978785 103000184 + lincRNA NOVEL OTTHUMG00000164837.1 21400 563 4 ENSG00000253663.1 NPM1P52 chr8 103016744 103017589 + processed_pseudogene KNOWN OTTHUMG00000164762.1 846 846 1 ENSG00000254236.1 KB-1639H6.2 chr8 103020187 103021428 - antisense NOVEL OTTHUMG00000164763.1 1242 414 2 ENSG00000116459.9 ATP5F1 chr1 111448864 111462773 + protein_coding KNOWN OTTHUMG00000011745.2 13910 3383 33 ENSG00000155097.10 ATP6V1C1 chr8 103021063 103073051 + protein_coding KNOWN OTTHUMG00000164761.1 51989 5851 58 ENSG00000253795.1 MTND1P5 chr8 103085651 103086590 + processed_pseudogene KNOWN OTTHUMG00000164801.1 940 940 1 ENSG00000253556.1 MTCO1P4 chr8 103088796 103090671 + processed_pseudogene KNOWN OTTHUMG00000164843.1 1876 1409 2 ENSG00000253977.1 MTCO2P4 chr8 103091263 103091509 + processed_pseudogene KNOWN OTTHUMG00000164844.1 247 247 1 ENSG00000265667.1 AP003550.1 chr8 103092624 103092721 - miRNA NOVEL NA 98 98 1 ENSG00000250929.2 LINC01181 chr8 103121032 103132966 + antisense NOVEL OTTHUMG00000164764.1 11935 556 2 ENSG00000236939.2 BAALC-AS2 chr8 103132963 103141475 - antisense KNOWN OTTHUMG00000164781.1 8513 513 4 ENSG00000164929.15 BAALC chr8 103140710 103230305 + protein_coding KNOWN OTTHUMG00000164782.1 89596 3997 24 ENSG00000265657.1 MIR3151 chr8 103154614 103154689 + miRNA KNOWN NA 76 76 1 ENSG00000247081.6 BAALC-AS1 chr8 103156990 103298772 - antisense NOVEL OTTHUMG00000164798.4 141783 3877 30 ENSG00000143110.10 C1orf162 chr1 111473792 111478512 + protein_coding KNOWN OTTHUMG00000011750.1 4721 2768 15 ENSG00000253851.1 RP11-318M2.3 chr8 103228425 103229314 - antisense NOVEL OTTHUMG00000164799.1 890 583 2 ENSG00000164930.10 FZD6 chr8 103298433 103332866 + protein_coding KNOWN OTTHUMG00000164840.1 34434 4065 48 ENSG00000164932.11 CTHRC1 chr8 103371515 103382997 + protein_coding KNOWN OTTHUMG00000164887.1 11483 1776 13 ENSG00000266289.1 RP11-1C8.6 chr8 103383078 103383854 - lincRNA NOVEL OTTHUMG00000178595.1 777 777 1 ENSG00000207399.1 RNU6-1011P chr8 103384961 103385067 + snRNA KNOWN NA 107 107 1 ENSG00000164933.10 SLC25A32 chr8 103398635 103415189 - protein_coding KNOWN OTTHUMG00000164790.5 16555 3654 26 ENSG00000164934.12 DCAF13 chr8 103414714 103443453 + protein_coding KNOWN OTTHUMG00000164888.4 28740 9199 66 ENSG00000261670.1 RP11-1C8.5 chr8 103464389 103468985 + lincRNA NOVEL OTTHUMG00000173365.1 4597 4597 1 ENSG00000271830.1 RP11-1C8.7 chr8 103481266 103481619 - lincRNA NOVEL OTTHUMG00000185513.1 354 354 1 ENSG00000253477.4 RP11-1C8.4 chr8 103483398 103501676 - antisense NOVEL OTTHUMG00000165035.1 18279 999 8 ENSG00000121933.16 ADORA3 chr1 111483348 111563962 - protein_coding KNOWN OTTHUMG00000011957.2 80615 4486 38 ENSG00000176406.19 RIMS2 chr8 103500748 104256094 + protein_coding KNOWN OTTHUMG00000162097.8 755347 12397 225 ENSG00000255105.1 RP11-5A11.1 chr8 103559099 103559389 - processed_pseudogene KNOWN OTTHUMG00000165288.1 291 291 1 ENSG00000254644.1 RP11-5A11.2 chr8 103568603 103568978 - processed_pseudogene KNOWN OTTHUMG00000165289.1 376 376 1 ENSG00000239344.1 RP11-771F20.1 chr8 103768281 103769029 + processed_pseudogene KNOWN OTTHUMG00000158677.1 749 749 1 ENSG00000147647.11 DPYS chr8 104330324 104467053 - protein_coding KNOWN OTTHUMG00000164891.3 136730 3818 30 ENSG00000164935.5 DCSTAMP chr8 104339087 104356689 + protein_coding KNOWN OTTHUMG00000164890.1 17603 2778 21 ENSG00000179577.3 KB-1552D7.2 chr8 104419512 104421500 - sense_intronic NOVEL OTTHUMG00000186799.1 1989 1989 3 ENSG00000222158.1 AP003471.1 chr8 104425359 104425438 + miRNA NOVEL NA 80 80 1 ENSG00000266734.1 AP003471.2 chr8 104435453 104435546 - miRNA NOVEL NA 94 94 1 ENSG00000279138.1 KB-1742H10.3 chr8 104478539 104480783 - TEC KNOWN OTTHUMG00000173419.1 2245 2245 1 ENSG00000200360.1 RNU6-792P chr1 111490317 111490423 - snRNA KNOWN NA 107 107 1 ENSG00000208032.1 MIR548A3 chr8 104484369 104484465 - miRNA KNOWN NA 97 97 1 ENSG00000147650.10 LRP12 chr8 104489231 104589024 - protein_coding KNOWN OTTHUMG00000164892.5 99794 9777 26 ENSG00000253454.1 NDUFA5P2 chr8 104566086 104566429 + processed_pseudogene KNOWN OTTHUMG00000164813.1 344 344 1 ENSG00000169946.12 ZFPM2 chr8 104590733 105804532 + protein_coding KNOWN OTTHUMG00000164818.3 1213800 7775 57 ENSG00000243939.1 RP11-200A13.1 chr8 104981164 104981579 - processed_pseudogene KNOWN OTTHUMG00000158678.1 416 416 1 ENSG00000253997.1 RP11-200A13.3 chr8 104990308 104990692 - processed_pseudogene KNOWN OTTHUMG00000164815.1 385 385 1 ENSG00000240271.1 RP11-200A13.2 chr8 105011107 105011568 + processed_pseudogene KNOWN OTTHUMG00000158679.1 462 462 1 ENSG00000254041.1 RP11-574O7.1 chr8 105142860 105188606 - antisense NOVEL OTTHUMG00000164816.1 45747 1031 3 ENSG00000253318.1 TMCC1P1 chr8 105194990 105196969 - processed_pseudogene KNOWN OTTHUMG00000164817.1 1980 1980 1 ENSG00000280925.1 AC041039.1 chr8 105271505 105271605 - miRNA NOVEL NA 101 101 1 ENSG00000116473.13 RAP1A chr1 111542218 111716691 + protein_coding KNOWN OTTHUMG00000011959.1 174474 5532 32 ENSG00000243171.1 RP11-273P3.1 chr8 105287830 105288365 - processed_pseudogene KNOWN OTTHUMG00000158680.1 536 536 1 ENSG00000253420.1 RP11-642D21.2 chr8 105662352 105685765 - antisense NOVEL OTTHUMG00000164859.1 23414 649 3 ENSG00000254141.1 RP11-642D21.1 chr8 105669991 105679031 + sense_intronic NOVEL OTTHUMG00000164860.1 9041 716 3 ENSG00000243601.1 RPL12P24 chr8 105737280 105737765 - processed_pseudogene KNOWN OTTHUMG00000158681.1 486 486 1 ENSG00000251003.6 ZFPM2-AS1 chr8 105780246 106060524 - processed_transcript NOVEL OTTHUMG00000164861.2 280279 2213 32 ENSG00000253526.1 RP11-152P17.3 chr8 105826570 105834038 + lincRNA NOVEL OTTHUMG00000164862.1 7469 445 2 ENSG00000201627.1 Y_RNA chr8 105929126 105929238 - misc_RNA NOVEL NA 113 113 1 ENSG00000213708.6 SLC16A14P1 chr8 106215763 106217218 + unprocessed_pseudogene KNOWN OTTHUMG00000160423.3 1456 1117 2 ENSG00000254021.1 RP11-778D12.2 chr8 106265435 106268741 - lincRNA NOVEL OTTHUMG00000164806.1 3307 489 2 ENSG00000254615.2 RP11-395G23.3 chr8 106270144 106272899 + lincRNA NOVEL OTTHUMG00000156320.6 2756 1419 4 ENSG00000231346.4 LINC01160 chr1 111599655 111608723 - lincRNA NOVEL OTTHUMG00000011958.2 9069 1377 13 ENSG00000164830.16 OXR1 chr8 106270178 106752694 + protein_coding KNOWN OTTHUMG00000167682.2 482517 7269 154 ENSG00000253582.1 RP11-649G15.2 chr8 106520474 106657548 - antisense NOVEL OTTHUMG00000164807.1 137075 504 4 ENSG00000253676.1 TAGLN2P1 chr8 106697427 106698013 - processed_pseudogene KNOWN OTTHUMG00000164808.2 587 587 1 ENSG00000251892.1 RNU7-84P chr8 106729795 106729856 - snRNA KNOWN NA 62 62 1 ENSG00000174429.3 ABRA chr8 106759483 106770245 - protein_coding KNOWN OTTHUMG00000164809.1 10763 2755 2 ENSG00000275905.1 KB-1433G4.1 chr8 106980967 106981571 - unprocessed_pseudogene KNOWN OTTHUMG00000187749.1 605 605 1 ENSG00000254146.1 HMGB1P46 chr8 107173200 107173809 - processed_pseudogene KNOWN OTTHUMG00000164810.2 610 610 1 ENSG00000154188.8 ANGPT1 chr8 107249482 107498055 - protein_coding KNOWN OTTHUMG00000164812.5 248574 7128 46 ENSG00000211995.1 AP000428.1 chr8 107254407 107254498 - miRNA NOVEL NA 92 92 1 ENSG00000248838.2 PGAM1P13 chr8 107647279 107648032 + processed_pseudogene KNOWN OTTHUMG00000160125.2 754 754 1 ENSG00000237402.1 CAMTA1-IT1 chr1 7368942 7370270 + sense_intronic NOVEL OTTHUMG00000001217.1 1329 365 2 ENSG00000215867.4 KRT18P57 chr1 111648291 111649544 - processed_pseudogene KNOWN OTTHUMG00000011952.2 1254 1254 1 ENSG00000200806.1 RNA5SP275 chr8 107884494 107884611 + rRNA KNOWN NA 118 118 1 ENSG00000147655.9 RSPO2 chr8 107899316 108083648 - protein_coding KNOWN OTTHUMG00000164893.1 184333 4115 34 ENSG00000253228.1 NRBF2P4 chr8 107983116 107983965 + processed_pseudogene KNOWN OTTHUMG00000164894.1 850 850 1 ENSG00000230948.1 AP001331.1 chr8 108131100 108132114 - processed_pseudogene KNOWN OTTHUMG00000133578.1 1015 1015 1 ENSG00000104408.8 EIF3E chr8 108201216 108435333 - protein_coding KNOWN OTTHUMG00000164858.5 234118 6005 111 ENSG00000253754.1 RP11-35G22.1 chr8 108226200 108227544 + antisense NOVEL OTTHUMG00000164866.1 1345 447 2 ENSG00000243287.2 RPS17P14 chr8 108378831 108379545 - processed_pseudogene KNOWN OTTHUMG00000158682.3 715 395 2 ENSG00000104412.6 EMC2 chr8 108443601 108486918 + protein_coding KNOWN OTTHUMG00000164873.4 43318 3781 47 ENSG00000253657.1 RP11-25P11.2 chr8 108572643 108573174 + processed_pseudogene KNOWN OTTHUMG00000164879.1 532 532 1 ENSG00000253949.1 RP11-790J24.1 chr8 108581062 108626767 + lincRNA NOVEL OTTHUMG00000164880.1 45706 382 3 ENSG00000201028.1 RNU6-151P chr1 111650431 111650537 - snRNA KNOWN NA 107 107 1 ENSG00000164841.4 TMEM74 chr8 108606850 108787615 - protein_coding KNOWN OTTHUMG00000164881.1 180766 2877 6 ENSG00000253580.1 RP11-790J24.2 chr8 108652373 108653315 + processed_pseudogene KNOWN OTTHUMG00000164882.1 943 943 1 ENSG00000253796.1 RP11-1084E5.1 chr8 108895029 109063417 - antisense NOVEL OTTHUMG00000164909.1 168389 890 10 ENSG00000174417.2 TRHR chr8 109086621 109119584 + protein_coding KNOWN OTTHUMG00000164910.1 32964 1678 5 ENSG00000120526.9 NUDCD1 chr8 109240919 109334385 - protein_coding KNOWN OTTHUMG00000164931.1 93467 4439 39 ENSG00000250267.2 RP11-122A21.2 chr8 109298598 109316513 + antisense NOVEL OTTHUMG00000164932.1 17916 1643 2 ENSG00000120533.11 ENY2 chr8 109334324 109345953 + protein_coding KNOWN OTTHUMG00000164933.1 11630 6783 65 ENSG00000205038.10 PKHD1L1 chr8 109362477 109530330 + protein_coding KNOWN OTTHUMG00000164934.3 167854 13728 108 ENSG00000254185.1 RP11-419L20.2 chr8 109470131 109471117 + processed_pseudogene KNOWN OTTHUMG00000164935.1 987 987 1 ENSG00000147654.13 EBAG9 chr8 109539711 109565996 + protein_coding KNOWN OTTHUMG00000165346.2 26286 3681 63 ENSG00000197852.9 FAM212B chr1 111680630 111755824 - protein_coding KNOWN OTTHUMG00000011953.2 75195 10740 18 ENSG00000147642.15 SYBU chr8 109573978 109691791 - protein_coding KNOWN OTTHUMG00000165634.1 117814 7024 203 ENSG00000248050.1 RP11-422N16.3 chr8 109644115 109648084 + antisense NOVEL OTTHUMG00000165635.1 3970 3075 2 ENSG00000255099.1 RP11-25D10.2 chr8 109777912 109782288 + processed_pseudogene KNOWN OTTHUMG00000165636.1 4377 2978 2 ENSG00000241385.1 RP11-25D10.1 chr8 109899246 109899762 - processed_pseudogene KNOWN OTTHUMG00000158683.1 517 517 1 ENSG00000164794.7 KCNV1 chr8 109963645 109975847 - protein_coding KNOWN OTTHUMG00000165637.1 12203 6979 7 ENSG00000255402.1 RP11-696P8.2 chr8 109973943 109974781 + antisense NOVEL OTTHUMG00000165638.1 839 553 2 ENSG00000240590.1 RP11-403P13.1 chr8 110105076 110105964 - processed_pseudogene KNOWN OTTHUMG00000158689.1 889 889 1 ENSG00000253956.1 RP11-211F2.1 chr8 110334743 110349607 - lincRNA NOVEL OTTHUMG00000164903.1 14865 773 3 ENSG00000253107.1 CTD-2544L4.1 chr8 110555408 110556518 + processed_pseudogene KNOWN OTTHUMG00000164904.1 1111 1111 1 ENSG00000253122.1 RP11-238I10.1 chr8 110609241 110632394 + lincRNA NOVEL OTTHUMG00000164915.1 23154 202 3 ENSG00000227811.2 FAM212B-AS1 chr1 111739841 111747798 + antisense NOVEL OTTHUMG00000011954.2 7958 2131 5 ENSG00000253717.1 KB-1299A7.2 chr8 110766863 110772759 + lincRNA NOVEL OTTHUMG00000164905.1 5897 476 2 ENSG00000253994.1 KB-1299A7.1 chr8 110809394 110809894 - processed_pseudogene KNOWN OTTHUMG00000164906.1 501 501 1 ENSG00000254241.1 RP11-946L20.1 chr8 110933263 110934533 - processed_pseudogene KNOWN OTTHUMG00000164907.1 1271 1271 1 ENSG00000273996.1 AC104946.1 chr8 110934669 110934731 - miRNA NOVEL NA 63 63 1 ENSG00000253877.4 RP11-946L20.2 chr8 110937690 111027433 - lincRNA NOVEL OTTHUMG00000164908.1 89744 752 11 ENSG00000253103.1 RP11-946L20.4 chr8 111098961 111236203 - lincRNA NOVEL OTTHUMG00000164912.1 137243 900 6 ENSG00000253489.1 RP11-114O8.1 chr8 111179193 111179872 - lincRNA NOVEL OTTHUMG00000164913.1 680 191 2 ENSG00000254124.1 EEF1A1P37 chr8 111225585 111227049 + processed_pseudogene KNOWN OTTHUMG00000164914.1 1465 715 2 ENSG00000253434.4 RP11-1101K5.1 chr8 111376639 111542973 + lincRNA NOVEL OTTHUMG00000164883.1 166335 1389 14 ENSG00000255033.1 SERPINA15P chr8 111380603 111380868 + processed_pseudogene KNOWN OTTHUMG00000165105.1 266 266 1 ENSG00000064703.10 DDX20 chr1 111755245 111768016 + protein_coding KNOWN OTTHUMG00000011956.3 12772 6019 31 ENSG00000253156.1 RP11-58O3.1 chr8 111621458 111621797 - processed_pseudogene KNOWN OTTHUMG00000164884.1 340 340 1 ENSG00000254262.1 RP11-58O3.2 chr8 111742012 111756826 + lincRNA NOVEL OTTHUMG00000164885.1 14815 650 6 ENSG00000222146.1 RNU4-37P chr8 112148742 112148825 - snRNA KNOWN NA 84 84 1 ENSG00000164796.16 CSMD3 chr8 112222928 113437099 - protein_coding KNOWN OTTHUMG00000157027.4 1214172 20567 299 ENSG00000276813.1 AC024996.1 chr8 112475590 112475696 - miRNA NOVEL NA 107 107 1 ENSG00000230169.1 RPL30P16 chr8 112538889 112539317 + processed_pseudogene KNOWN OTTHUMG00000157026.1 429 429 1 ENSG00000238399.1 MIR2053 chr8 112643493 112643583 + miRNA KNOWN NA 91 91 1 ENSG00000275892.1 AC067903.1 chr8 113190050 113190153 - miRNA NOVEL NA 104 104 1 ENSG00000227514.3 RP11-709P2.1 chr8 113376669 113377227 + processed_pseudogene KNOWN OTTHUMG00000157028.4 559 521 2 ENSG00000221610.1 AC107890.1 chr8 113407527 113407594 - miRNA NOVEL NA 68 68 1 ENSG00000171385.8 KCND3 chr1 111770662 111989155 - protein_coding KNOWN OTTHUMG00000011989.1 218494 7863 21 ENSG00000253207.3 RP11-67H2.1 chr8 113600310 113616958 + lincRNA NOVEL OTTHUMG00000164895.3 16649 1584 4 ENSG00000206719.1 Y_RNA chr8 113950886 113950998 + misc_RNA NOVEL NA 113 113 1 ENSG00000254339.4 RP11-267L5.1 chr8 114282067 114295839 + lincRNA NOVEL OTTHUMG00000164897.1 13773 1192 15 ENSG00000253499.2 RP11-393K19.1 chr8 114318400 114318911 - processed_pseudogene KNOWN OTTHUMG00000164898.2 512 512 1 ENSG00000253756.1 CARSP2 chr8 114791653 114791929 - processed_pseudogene KNOWN OTTHUMG00000164902.2 277 277 1 ENSG00000104447.10 TRPS1 chr8 115408496 115809673 - protein_coding KNOWN OTTHUMG00000142829.5 401178 11072 52 ENSG00000227170.1 AF178030.2 chr8 115509602 115511325 + antisense NOVEL OTTHUMG00000142828.1 1724 402 2 ENSG00000249917.2 LINC00536 chr8 115950511 116325059 - lincRNA NOVEL OTTHUMG00000164936.1 374549 2692 14 ENSG00000199450.1 RNA5SP276 chr8 116022686 116022779 - rRNA KNOWN NA 94 94 1 ENSG00000221793.1 AC103863.1 chr8 116136773 116136914 + miRNA NOVEL NA 142 142 1 ENSG00000232558.1 KCND3-IT1 chr1 111853762 111856905 - sense_intronic NOVEL OTTHUMG00000011990.1 3144 376 2 ENSG00000253672.1 RP11-536K17.1 chr8 116402543 116403757 - lincRNA NOVEL OTTHUMG00000164918.1 1215 555 2 ENSG00000147677.9 EIF3H chr8 116642130 116766925 - protein_coding KNOWN OTTHUMG00000164919.1 124796 6434 65 ENSG00000147679.10 UTP23 chr8 116766503 116849463 + protein_coding KNOWN OTTHUMG00000164958.2 82961 5252 24 ENSG00000164754.11 RAD21 chr8 116845935 116874866 - protein_coding KNOWN OTTHUMG00000164959.2 28932 6192 51 ENSG00000281527.1 AC087350.1 chr8 116849884 116851073 + protein_coding NOVEL NA 1190 96 4 ENSG00000253327.2 RAD21-AS1 chr8 116874424 116876868 + antisense KNOWN OTTHUMG00000164960.2 2445 2010 2 ENSG00000264875.1 MIR3610 chr8 116874728 116874800 - miRNA KNOWN NA 73 73 1 ENSG00000205002.3 AARD chr8 116938199 116944487 + protein_coding KNOWN OTTHUMG00000164961.1 6289 2412 4 ENSG00000164756.11 SLC30A8 chr8 116950273 117176714 + protein_coding KNOWN OTTHUMG00000164962.2 226442 6279 57 ENSG00000244033.3 RN7SL228P chr8 117017946 117018248 + misc_RNA KNOWN NA 303 303 1 ENSG00000237556.1 KCND3-AS1 chr1 111909336 111910931 + antisense NOVEL OTTHUMG00000011993.2 1596 777 10 ENSG00000253271.2 RP11-1059L18.1 chr8 117055818 117056145 + processed_pseudogene KNOWN OTTHUMG00000164963.2 328 328 1 ENSG00000253622.1 RP11-654G14.1 chr8 117128455 117130299 + sense_intronic NOVEL OTTHUMG00000164964.1 1845 497 2 ENSG00000240151.3 RN7SL826P chr8 117163968 117164255 + misc_RNA KNOWN NA 288 288 1 ENSG00000281002.1 AC084114.1 chr8 117164179 117164255 + miRNA NOVEL NA 77 77 1 ENSG00000252852.1 SNORA31 chr8 117313528 117313661 + snoRNA NOVEL NA 134 134 1 ENSG00000164758.6 MED30 chr8 117520713 117540262 + protein_coding KNOWN OTTHUMG00000164920.1 19550 1440 11 ENSG00000239917.3 RPS10P16 chr8 117523271 117524061 - unprocessed_pseudogene KNOWN OTTHUMG00000158690.3 791 496 2 ENSG00000182197.9 EXT1 chr8 117794490 118111853 - protein_coding KNOWN OTTHUMG00000059718.5 317364 8325 26 ENSG00000279535.1 AC113188.2 chr8 118189455 118189970 - TEC KNOWN OTTHUMG00000059815.1 516 516 1 ENSG00000177570.12 SAMD12 chr8 118189459 118621995 - protein_coding KNOWN OTTHUMG00000059817.5 432537 10756 31 ENSG00000231437.3 RP11-88H9.2 chr1 111989770 111998842 + lincRNA NOVEL OTTHUMG00000011992.2 9073 3590 6 ENSG00000225885.5 AC023590.1 chr8 118282139 118400605 + antisense NOVEL OTTHUMG00000059818.4 118467 1617 19 ENSG00000281641.1 SAMD12-AS1 chr8 118621001 118858218 + lincRNA KNOWN OTTHUMG00000189550.2 237218 880 11 ENSG00000242206.2 RPS26P35 chr8 118761856 118762201 - processed_pseudogene KNOWN OTTHUMG00000158691.2 346 346 1 ENSG00000164761.7 TNFRSF11B chr8 118923557 118952200 - protein_coding KNOWN OTTHUMG00000164969.1 28644 2827 13 ENSG00000207334.1 RNU6-12P chr8 118976513 118976619 + snRNA KNOWN NA 107 107 1 ENSG00000254247.1 RP11-278I4.1 chr8 118982579 118982875 - processed_pseudogene KNOWN OTTHUMG00000164970.1 297 297 1 ENSG00000184374.2 COLEC10 chr8 118995452 119106582 + protein_coding KNOWN OTTHUMG00000164971.1 111131 1670 13 ENSG00000254278.1 RP11-278I4.2 chr8 119062942 119068782 - antisense NOVEL OTTHUMG00000164972.1 5841 1408 2 ENSG00000147676.12 MAL2 chr8 119165034 119245673 + protein_coding KNOWN OTTHUMG00000164973.4 80640 3430 17 ENSG00000253972.4 RP11-4K16.2 chr8 119215111 119246848 - lincRNA NOVEL OTTHUMG00000164978.1 31738 1515 20 ENSG00000231246.1 RP5-965F6.2 chr1 112177234 112360528 - lincRNA NOVEL OTTHUMG00000012183.1 183295 547 2 ENSG00000276479.1 MIR548AZ chr8 119325171 119325265 + miRNA KNOWN NA 95 95 1 ENSG00000206776.1 SNORA32 chr8 119388348 119388469 + snoRNA NOVEL NA 122 122 1 ENSG00000136999.4 NOV chr8 119416306 119424353 + protein_coding KNOWN OTTHUMG00000164984.1 8048 2673 7 ENSG00000253398.1 RP11-775B15.2 chr8 119419910 119462350 - antisense NOVEL OTTHUMG00000164985.1 42441 325 4 ENSG00000254037.2 RP11-775B15.3 chr8 119480279 119480775 - processed_pseudogene KNOWN OTTHUMG00000164994.2 497 497 1 ENSG00000136960.11 ENPP2 chr8 119557086 119673453 - protein_coding KNOWN OTTHUMG00000164995.1 116368 6729 143 ENSG00000253495.1 CYCSP23 chr8 119618162 119618474 - processed_pseudogene KNOWN OTTHUMG00000164996.1 313 313 1 ENSG00000201896.1 RN7SKP153 chr8 119711830 119712145 - misc_RNA KNOWN NA 316 316 1 ENSG00000064313.10 TAF2 chr8 119730775 119832863 - protein_coding KNOWN OTTHUMG00000165009.3 102089 6547 63 ENSG00000136982.5 DSCC1 chr8 119833976 119856010 - protein_coding KNOWN OTTHUMG00000165010.1 22035 2603 11 ENSG00000237728.2 RP3-453P22.2 chr1 7382487 7389754 - antisense NOVEL OTTHUMG00000001219.2 7268 744 5 ENSG00000234388.2 TXNP3 chr1 112363281 112363581 + processed_pseudogene KNOWN OTTHUMG00000011153.2 301 301 1 ENSG00000279347.1 RP11-85I17.2 chr8 119838736 119840385 - TEC KNOWN OTTHUMG00000165011.2 1650 1650 1 ENSG00000244642.3 RN7SL396P chr8 119862662 119862956 + misc_RNA KNOWN NA 295 295 1 ENSG00000245330.4 KB-1471A8.1 chr8 119867419 119874488 - lincRNA NOVEL OTTHUMG00000165012.2 7070 1945 5 ENSG00000155792.8 DEPTOR chr8 119873717 120050913 + protein_coding KNOWN OTTHUMG00000165052.1 177197 2622 22 ENSG00000202356.1 RNA5SP277 chr8 119891132 119891229 - rRNA KNOWN NA 98 98 1 ENSG00000254343.2 RP11-760H22.2 chr8 120052180 120056201 + lincRNA NOVEL OTTHUMG00000165053.2 4022 752 4 ENSG00000187955.10 COL14A1 chr8 120059780 120372036 + protein_coding KNOWN OTTHUMG00000149877.3 312257 8647 225 ENSG00000172172.6 MRPL13 chr8 120380761 120445402 - protein_coding KNOWN OTTHUMG00000165039.2 64642 4209 30 ENSG00000172167.6 MTBP chr8 120445400 120542133 + protein_coding KNOWN OTTHUMG00000165040.1 96734 8326 53 ENSG00000172164.12 SNTB1 chr8 120535745 120813273 - protein_coding KNOWN OTTHUMG00000165041.1 277529 6747 25 ENSG00000238761.1 snoU13 chr1 112371004 112371107 + snoRNA NOVEL NA 104 104 1 ENSG00000250290.1 CTC-820M8.1 chr8 120635558 120638204 - processed_pseudogene KNOWN OTTHUMG00000160497.1 2647 1814 2 ENSG00000248318.1 RP11-713M15.1 chr8 120761253 120776832 + antisense NOVEL OTTHUMG00000165042.1 15580 1973 5 ENSG00000272502.1 RP11-713M15.2 chr8 120812219 120813359 + antisense NOVEL OTTHUMG00000185517.1 1141 1141 1 ENSG00000253619.1 RP11-369K17.1 chr8 120913065 121119754 + lincRNA NOVEL OTTHUMG00000165043.1 206690 776 4 ENSG00000271219.1 RP11-369K17.2 chr8 121113358 121113919 - processed_pseudogene KNOWN OTTHUMG00000184723.1 562 562 1 ENSG00000221644.1 AC027238.1 chr8 121186758 121186892 - miRNA NOVEL NA 135 135 1 ENSG00000239872.1 RPL35AP19 chr8 121380137 121380465 - processed_pseudogene KNOWN OTTHUMG00000158692.1 329 329 1 ENSG00000263525.1 AC022909.1 chr8 121542897 121542995 - miRNA NOVEL NA 99 99 1 ENSG00000170961.6 HAS2 chr8 121612116 121641390 - protein_coding KNOWN OTTHUMG00000164953.2 29275 4190 4 ENSG00000248690.5 HAS2-AS1 chr8 121639293 121644693 + antisense KNOWN OTTHUMG00000164965.2 5401 1796 14 ENSG00000143079.13 CTTNBP2NL chr1 112396181 112463456 + protein_coding KNOWN OTTHUMG00000011154.3 67276 7404 16 ENSG00000254209.1 RP11-3G20.1 chr8 121671773 121684562 - lincRNA NOVEL OTTHUMG00000164954.1 12790 414 3 ENSG00000248478.2 RP11-3G20.2 chr8 121679126 121707631 + lincRNA NOVEL OTTHUMG00000164955.1 28506 339 3 ENSG00000254018.1 RP11-785H20.1 chr8 121884724 121904273 + lincRNA NOVEL OTTHUMG00000164966.2 19550 611 4 ENSG00000254303.1 RP11-398G24.2 chr8 121954640 122127184 - lincRNA NOVEL OTTHUMG00000164967.1 172545 790 3 ENSG00000253814.1 MRPS36P3 chr8 122091480 122091609 + processed_pseudogene KNOWN OTTHUMG00000164968.1 130 130 1 ENSG00000255364.1 RP11-94A24.1 chr8 122414332 122428551 - lincRNA NOVEL OTTHUMG00000165130.1 14220 553 3 ENSG00000255325.2 RP11-96B2.1 chr8 122485515 122489815 - lincRNA NOVEL OTTHUMG00000165131.2 4301 631 4 ENSG00000253819.1 LINC01151 chr8 122670385 122694106 - lincRNA NOVEL OTTHUMG00000165076.1 23722 571 4 ENSG00000238901.1 snoU13 chr8 122671291 122671394 + snoRNA NOVEL NA 104 104 1 ENSG00000263443.1 RP11-973F15.2 chr8 122700269 122703423 - lincRNA NOVEL OTTHUMG00000179558.1 3155 501 2 ENSG00000134245.16 WNT2B chr1 112466541 112530165 + protein_coding KNOWN OTTHUMG00000011157.2 63625 12561 18 ENSG00000235165.2 CDK5PS chr8 122769274 122770150 + processed_pseudogene KNOWN OTTHUMG00000133575.2 877 877 1 ENSG00000272384.1 RP11-44N11.2 chr8 122779971 122780830 - lincRNA NOVEL OTTHUMG00000185333.1 860 860 1 ENSG00000272043.1 RP11-44N11.3 chr8 122780760 122781071 + lincRNA NOVEL OTTHUMG00000185334.1 312 312 1 ENSG00000178764.7 ZHX2 chr8 122781394 122974512 + protein_coding KNOWN OTTHUMG00000165077.4 193119 4716 6 ENSG00000253372.4 RP11-44N11.1 chr8 122807746 122816517 + sense_intronic NOVEL OTTHUMG00000165078.1 8772 1018 10 ENSG00000221542.1 AC016405.1 chr8 122846691 122846779 - miRNA NOVEL NA 89 89 1 ENSG00000259631.1 RP11-557C18.4 chr8 122977026 122985629 - lincRNA NOVEL OTTHUMG00000172563.1 8604 326 2 ENSG00000253607.1 RP11-557C18.3 chr8 123002560 123030751 + antisense NOVEL OTTHUMG00000165079.1 28192 625 2 ENSG00000136986.8 DERL1 chr8 123013164 123042423 - protein_coding KNOWN OTTHUMG00000165080.3 29260 7081 40 ENSG00000156787.15 TBC1D31 chr8 123041968 123152153 + protein_coding KNOWN OTTHUMG00000165081.7 110186 8611 162 ENSG00000273483.1 RP4-671G15.2 chr1 112517799 112518441 - antisense NOVEL OTTHUMG00000186364.1 643 643 1 ENSG00000280598.1 Y_RNA chr8 123044717 123044812 + misc_RNA NOVEL NA 96 96 1 ENSG00000253463.1 HMGB1P19 chr8 123123106 123123682 + processed_pseudogene KNOWN OTTHUMG00000165082.1 577 577 1 ENSG00000147689.15 FAM83A chr8 123178960 123210079 + protein_coding KNOWN OTTHUMG00000165083.3 31120 6317 35 ENSG00000221461.2 U3 chr8 123180310 123180525 - snoRNA NOVEL NA 216 216 1 ENSG00000253258.1 RP11-539E17.5 chr8 123181638 123182788 - antisense NOVEL OTTHUMG00000165084.1 1151 777 2 ENSG00000253410.1 RP11-539E17.3 chr8 123192875 123192932 + transcribed_processed_pseudogene KNOWN OTTHUMG00000165085.1 58 58 1 ENSG00000204949.7 FAM83A-AS1 chr8 123201172 123202743 - antisense NOVEL OTTHUMG00000165086.1 1572 1347 7 ENSG00000266324.1 MIR4663 chr8 123215788 123215863 - miRNA KNOWN NA 76 76 1 ENSG00000189376.10 C8orf76 chr8 123219957 123241398 - protein_coding KNOWN OTTHUMG00000172562.2 21442 2467 27 ENSG00000259305.4 ZHX1-C8orf76 chr8 123226189 123274487 - protein_coding KNOWN OTTHUMG00000165087.2 48299 1528 11 ENSG00000007341.17 ST7L chr1 112523518 112620825 - protein_coding KNOWN OTTHUMG00000011753.7 97308 8111 228 ENSG00000243498.2 UBA52P5 chr8 123236852 123237062 + processed_pseudogene KNOWN OTTHUMG00000158695.3 211 211 1 ENSG00000165156.13 ZHX1 chr8 123248451 123275541 - protein_coding KNOWN OTTHUMG00000165088.4 27091 6741 25 ENSG00000222607.1 RNU6-628P chr8 123262843 123262949 + snRNA KNOWN NA 107 107 1 ENSG00000253336.1 RP11-468O2.1 chr8 123288355 123290503 + processed_pseudogene KNOWN OTTHUMG00000165089.1 2149 2149 1 ENSG00000156802.11 ATAD2 chr8 123319850 123416350 - protein_coding KNOWN OTTHUMG00000165090.3 96501 7118 139 ENSG00000252297.1 RNU6-875P chr8 123342414 123342519 + snRNA KNOWN NA 106 106 1 ENSG00000207704.2 MIR548AA1 chr8 123348034 123348130 + miRNA KNOWN NA 97 97 1 ENSG00000254388.1 DUTP2 chr8 123352181 123352643 + processed_pseudogene KNOWN OTTHUMG00000165091.1 463 463 1 ENSG00000254294.1 IMPDH1P6 chr8 123400582 123402095 + processed_pseudogene KNOWN OTTHUMG00000165092.1 1514 1514 1 ENSG00000156795.5 WDYHV1 chr8 123416725 123467230 + protein_coding KNOWN OTTHUMG00000165093.2 50506 2132 54 ENSG00000116489.11 CAPZA1 chr1 112619173 112671619 + protein_coding KNOWN OTTHUMG00000011769.2 52447 4130 36 ENSG00000278374.1 U4 chr8 123454981 123455107 - snRNA NOVEL NA 127 127 1 ENSG00000156804.6 FBXO32 chr8 123497889 123541206 - protein_coding KNOWN OTTHUMG00000164981.2 43318 7395 36 ENSG00000254113.1 RP11-174I12.2 chr8 123563070 123568762 - lincRNA NOVEL OTTHUMG00000164982.1 5693 537 2 ENSG00000251840.1 RN7SKP155 chr8 123588759 123589046 + misc_RNA KNOWN NA 288 288 1 ENSG00000253286.4 CTD-2552K11.2 chr8 123614225 123658570 + antisense NOVEL OTTHUMG00000164986.1 44346 940 9 ENSG00000175946.8 KLHL38 chr8 123645527 123652950 - protein_coding KNOWN OTTHUMG00000164983.1 7424 1982 3 ENSG00000104537.15 ANXA13 chr8 123680794 123737407 - protein_coding KNOWN OTTHUMG00000164987.1 56614 3806 35 ENSG00000176853.14 FAM91A1 chr8 123768456 123815452 + protein_coding KNOWN OTTHUMG00000133021.4 46997 7246 90 ENSG00000214814.5 FER1L6 chr8 123851987 124120061 + protein_coding KNOWN OTTHUMG00000164998.1 268075 6058 81 ENSG00000254000.1 RP11-245A18.1 chr8 123924759 123925933 - lincRNA NOVEL OTTHUMG00000164999.1 1175 331 2 ENSG00000235299.2 MRPL53P1 chr1 112625906 112626224 - processed_pseudogene KNOWN OTTHUMG00000011904.2 319 319 1 ENSG00000181171.5 FER1L6-AS1 chr8 123984138 124040782 - antisense NOVEL OTTHUMG00000165001.1 56645 2315 6 ENSG00000254249.1 RP11-959I15.4 chr8 124036010 124040468 - antisense NOVEL OTTHUMG00000165002.1 4459 327 2 ENSG00000253868.3 FER1L6-AS2 chr8 124046073 124171522 - antisense NOVEL OTTHUMG00000165000.2 125450 1746 5 ENSG00000250727.1 RP11-959I15.1 chr8 124141888 124143512 + processed_pseudogene KNOWN OTTHUMG00000160428.1 1625 1456 2 ENSG00000253885.1 ARF1P3 chr8 124151923 124152433 + processed_pseudogene KNOWN OTTHUMG00000165003.1 511 511 1 ENSG00000214803.3 RP11-37N22.1 chr8 124192671 124247398 - lincRNA NOVEL OTTHUMG00000165018.1 54728 1195 3 ENSG00000206724.1 RNU6-756P chr8 124260646 124260752 + snRNA KNOWN NA 107 107 1 ENSG00000253227.1 RP11-383J24.1 chr8 124271683 124277584 + lincRNA NOVEL OTTHUMG00000165019.1 5902 553 3 ENSG00000237586.3 RP11-383J24.2 chr8 124301315 124301804 + processed_pseudogene KNOWN OTTHUMG00000165020.1 490 490 1 ENSG00000164983.7 TMEM65 chr8 124306189 124372692 - protein_coding KNOWN OTTHUMG00000165021.2 66504 9029 7 ENSG00000252750.1 RNU7-70P chr1 112634719 112634784 - snRNA KNOWN NA 66 66 1 ENSG00000183665.5 TRMT12 chr8 124450820 124462150 + protein_coding KNOWN OTTHUMG00000165022.1 11331 2331 6 ENSG00000245149.3 RNF139-AS1 chr8 124462485 124474576 - lincRNA NOVEL OTTHUMG00000165073.2 12092 6943 6 ENSG00000170881.4 RNF139 chr8 124474738 124487914 + protein_coding KNOWN OTTHUMG00000165072.2 13177 2700 4 ENSG00000147687.15 TATDN1 chr8 124488485 124539458 - protein_coding KNOWN OTTHUMG00000165068.3 50974 4778 169 ENSG00000253106.1 RP11-158K1.3 chr8 124488510 124491643 + antisense NOVEL OTTHUMG00000165069.1 3134 2355 2 ENSG00000147684.6 NDUFB9 chr8 124539103 124568510 + protein_coding KNOWN OTTHUMG00000165054.1 29408 2629 23 ENSG00000170873.17 MTSS1 chr8 124550790 124728429 - protein_coding KNOWN OTTHUMG00000048189.4 177640 7727 116 ENSG00000272486.1 RP11-532M24.1 chr8 124579631 124580648 + antisense NOVEL OTTHUMG00000185621.1 1018 1018 1 ENSG00000255491.1 RP11-1082L8.4 chr8 124811618 124815682 - lincRNA NOVEL OTTHUMG00000165099.1 4065 782 3 ENSG00000263735.1 MIR4662B chr8 124821978 124822058 - miRNA KNOWN NA 81 81 1 ENSG00000155363.17 MOV10 chr1 112673141 112700746 + protein_coding KNOWN OTTHUMG00000011906.1 27606 6509 162 ENSG00000255080.1 RP11-1082L8.3 chr8 124834884 124857516 - lincRNA NOVEL OTTHUMG00000165100.1 22633 553 3 ENSG00000281439.1 Metazoa_SRP chr8 124838058 124838331 + misc_RNA NOVEL NA 274 274 1 ENSG00000249816.5 LINC00964 chr8 124848737 124954328 + lincRNA NOVEL OTTHUMG00000165101.1 105592 5038 30 ENSG00000250428.1 RP11-1082L8.1 chr8 124920428 124922076 + processed_pseudogene KNOWN OTTHUMG00000160429.1 1649 1228 2 ENSG00000255313.1 RP11-1082L8.2 chr8 124936524 124943765 - lincRNA NOVEL OTTHUMG00000165102.1 7242 487 3 ENSG00000180938.5 ZNF572 chr8 124973298 124979389 + protein_coding KNOWN OTTHUMG00000164988.1 6092 3275 3 ENSG00000253513.1 RP11-6D1.3 chr8 124996985 124998198 - antisense NOVEL OTTHUMG00000164989.1 1214 412 2 ENSG00000104549.10 SQLE chr8 124998497 125022283 + protein_coding KNOWN OTTHUMG00000164990.1 23787 4305 35 ENSG00000164961.14 KIAA0196 chr8 125024260 125091840 - protein_coding KNOWN OTTHUMG00000164991.3 67581 4784 79 ENSG00000253167.1 KIAA0196-AS1 chr8 125040684 125044989 + antisense NOVEL OTTHUMG00000164992.1 4306 587 2 ENSG00000225126.1 RP4-549F15.1 chr1 7441096 7441554 - antisense NOVEL OTTHUMG00000001220.1 459 361 2 ENSG00000225075.1 RP11-426L16.3 chr1 112693688 112696621 - antisense NOVEL OTTHUMG00000011907.1 2934 449 3 ENSG00000156831.6 NSMCE2 chr8 125091679 125367120 + protein_coding KNOWN OTTHUMG00000164993.3 275442 2991 67 ENSG00000242170.3 RN7SL329P chr8 125270604 125270902 + misc_RNA KNOWN NA 299 299 1 ENSG00000254431.1 RP11-550A5.2 chr8 125348196 125351416 - antisense NOVEL OTTHUMG00000165219.1 3221 722 2 ENSG00000173334.3 TRIB1 chr8 125430321 125438405 + protein_coding KNOWN OTTHUMG00000165007.1 8085 4138 10 ENSG00000253111.1 RP11-136O12.2 chr8 125466939 125541373 + lincRNA NOVEL OTTHUMG00000165008.1 74435 1415 6 ENSG00000277329.1 AC091114.1 chr8 125524878 125524964 + miRNA NOVEL NA 87 87 1 ENSG00000253470.1 RP11-697B24.1 chr8 125749055 125750241 - lincRNA NOVEL OTTHUMG00000165024.1 1187 636 2 ENSG00000206695.1 RNU6-442P chr8 125900951 125901054 + snRNA KNOWN NA 104 104 1 ENSG00000245164.5 LINC00861 chr8 125922308 125951249 - lincRNA NOVEL OTTHUMG00000165025.1 28942 5724 13 ENSG00000253651.1 SOD1P3 chr8 125951861 125952314 - processed_pseudogene KNOWN OTTHUMG00000165026.1 454 454 1 ENSG00000155366.15 RHOC chr1 112701106 112707434 - protein_coding KNOWN OTTHUMG00000011905.5 6329 4028 98 ENSG00000254227.1 RP11-622O11.4 chr8 125998994 126001001 - lincRNA NOVEL OTTHUMG00000165027.1 2008 204 2 ENSG00000250563.1 KNOP1P5 chr8 126072587 126074231 + processed_pseudogene KNOWN OTTHUMG00000160537.1 1645 1378 2 ENSG00000253841.1 RP11-622O11.5 chr8 126073046 126073532 - processed_pseudogene KNOWN OTTHUMG00000165028.1 487 487 1 ENSG00000221706.1 AC090573.1 chr8 126141676 126141759 - miRNA NOVEL NA 84 84 1 ENSG00000248720.1 RFPL4AP5 chr8 126174186 126175014 - processed_pseudogene KNOWN OTTHUMG00000160498.1 829 504 2 ENSG00000244791.2 RP11-65D17.1 chr8 126325495 126329535 + lincRNA NOVEL OTTHUMG00000165030.1 4041 1422 3 ENSG00000253427.1 RP11-103H7.1 chr8 126474189 126492596 + lincRNA NOVEL OTTHUMG00000165031.1 18408 415 3 ENSG00000253220.1 RP11-103H7.2 chr8 126498149 126500303 + lincRNA NOVEL OTTHUMG00000165032.1 2155 489 2 ENSG00000207138.1 RNU6-869P chr8 126504763 126504869 + snRNA KNOWN NA 107 107 1 ENSG00000253530.1 RP11-103H7.3 chr8 126518698 126522351 + lincRNA NOVEL OTTHUMG00000165033.1 3654 429 3 ENSG00000271810.4 RP11-426L16.10 chr1 112702614 112711433 - protein_coding NOVEL OTTHUMG00000185387.1 8820 1078 33 ENSG00000168672.3 FAM84B chr8 126552442 126558393 - protein_coding KNOWN OTTHUMG00000165034.1 5952 5404 4 ENSG00000254010.1 RP11-103H7.5 chr8 126556896 126557433 + antisense NOVEL OTTHUMG00000165044.1 538 484 2 ENSG00000254286.4 RP11-89K10.1 chr8 126557875 126713415 + antisense NOVEL OTTHUMG00000165045.2 155541 1403 14 ENSG00000253543.1 RP11-89K10.2 chr8 126582631 126583006 - processed_pseudogene KNOWN OTTHUMG00000165060.1 376 376 1 ENSG00000212451.1 RNU11-4P chr8 126671522 126671654 + snRNA KNOWN NA 133 133 1 ENSG00000253573.1 RP11-351C8.1 chr8 126766876 126790637 - lincRNA NOVEL OTTHUMG00000165046.2 23762 292 4 ENSG00000253438.2 PCAT1 chr8 126847055 127021014 + lincRNA NOVEL OTTHUMG00000165061.2 173960 2315 7 ENSG00000253264.1 PCAT2 chr8 127072694 127082221 - lincRNA NOVEL OTTHUMG00000165062.1 9528 575 4 ENSG00000224722.3 RP11-255B23.1 chr8 127086263 127087510 - processed_pseudogene KNOWN OTTHUMG00000165063.1 1248 1248 1 ENSG00000254166.1 CASC19 chr8 127185635 127203222 - lincRNA NOVEL OTTHUMG00000165064.1 17588 367 4 ENSG00000155367.14 PPM1J chr1 112709994 112715477 - protein_coding KNOWN OTTHUMG00000012019.5 5484 2874 39 ENSG00000247844.1 CCAT1 chr8 127207866 127219088 - lincRNA NOVEL OTTHUMG00000165065.1 11223 2131 2 ENSG00000246228.5 CASC8 chr8 127289817 127482139 - antisense NOVEL OTTHUMG00000187906.1 192323 2342 16 ENSG00000271509.1 RP11-382A18.3 chr8 127292233 127292440 + processed_pseudogene KNOWN OTTHUMG00000184577.1 208 208 1 ENSG00000253929.1 CASC21 chr8 127339274 127392631 + lincRNA NOVEL OTTHUMG00000165067.1 53358 290 2 ENSG00000280997.1 CCAT2 chr8 127400399 127402150 + lincRNA KNOWN OTTHUMG00000189734.1 1752 1752 1 ENSG00000212993.4 POU5F1B chr8 127414290 127420069 + protein_coding KNOWN OTTHUMG00000157807.3 5780 5360 2 ENSG00000279524.1 AC108925.1 chr8 127630283 127630657 - protein_coding KNOWN NA 375 375 1 ENSG00000249375.6 CASC11 chr8 127686343 127733967 - lincRNA NOVEL OTTHUMG00000164870.2 47625 4678 9 ENSG00000136997.13 MYC chr8 127735434 127741434 + protein_coding KNOWN OTTHUMG00000128475.5 6001 3001 20 ENSG00000249859.6 PVT1 chr8 127794533 128101253 + lincRNA KNOWN OTTHUMG00000164871.1 306721 5493 72 ENSG00000261595.1 RP11-426L16.9 chr1 112715672 112717796 + antisense NOVEL OTTHUMG00000176040.1 2125 2125 1 ENSG00000276443.1 PVT1_1 chr8 127794541 127794734 + misc_RNA NOVEL NA 194 194 1 ENSG00000275264.1 MIR1204 chr8 127795962 127796028 + miRNA KNOWN NA 67 67 1 ENSG00000278324.1 PVT1_3 chr8 127890626 127890720 + misc_RNA NOVEL NA 95 95 1 ENSG00000280055.1 TMEM75 chr8 127946559 127948723 - TEC KNOWN OTTHUMG00000187197.1 2165 2165 2 ENSG00000221771.1 MIR1205 chr8 127960633 127960695 + miRNA KNOWN NA 63 63 1 ENSG00000207110.1 RNU1-106P chr8 127999131 127999294 + snRNA KNOWN NA 164 164 1 ENSG00000278275.1 RP11-55J15.2 chr8 128010188 128010428 - processed_pseudogene KNOWN OTTHUMG00000187750.1 241 241 1 ENSG00000222501.1 RNU4-25P chr8 128010382 128010611 - snRNA KNOWN NA 230 230 1 ENSG00000221176.1 MIR1207 chr8 128049152 128049238 + miRNA KNOWN NA 87 87 1 ENSG00000280151.1 FKSG59 chr8 128118011 128118385 + protein_coding KNOWN NA 375 375 1 ENSG00000184599.12 FAM19A3 chr1 112720419 112727235 + protein_coding KNOWN OTTHUMG00000012020.1 6817 1282 10 ENSG00000221261.1 MIR1208 chr8 128150116 128150188 + miRNA KNOWN NA 73 73 1 ENSG00000201782.1 RN7SKP226 chr8 128220504 128220803 + misc_RNA KNOWN NA 300 300 1 ENSG00000254275.5 LINC00824 chr8 128405269 128564679 - processed_transcript NOVEL OTTHUMG00000165050.1 159411 4557 24 ENSG00000221351.1 AC068570.1 chr8 128819794 128819878 + miRNA NOVEL NA 85 85 1 ENSG00000281657.1 LINC00976 chr8 128904773 128966001 - lincRNA KNOWN OTTHUMG00000189736.1 61229 1983 14 ENSG00000250400.3 LINC00977 chr8 129216467 129241250 - lincRNA NOVEL OTTHUMG00000164846.2 24784 1163 3 ENSG00000253225.1 RP11-1057N3.2 chr8 129250967 129251138 + processed_pseudogene KNOWN OTTHUMG00000164847.1 172 172 1 ENSG00000222755.1 RN7SKP206 chr8 129290983 129291275 + misc_RNA KNOWN NA 293 293 1 ENSG00000229140.7 CCDC26 chr8 129351691 129680239 - lincRNA NOVEL OTTHUMG00000164848.1 328549 2027 11 ENSG00000253926.1 RP11-26E5.1 chr8 129415949 129445852 + lincRNA NOVEL OTTHUMG00000164849.1 29904 281 3 ENSG00000234790.1 NUTF2P4 chr1 112748095 112748475 + processed_pseudogene KNOWN OTTHUMG00000012021.1 381 381 1 ENSG00000263763.1 MIR3686 chr8 129484057 129484142 - miRNA KNOWN NA 86 86 1 ENSG00000254223.1 RP11-419K12.1 chr8 129679135 129683679 - lincRNA NOVEL OTTHUMG00000164850.1 4545 683 4 ENSG00000224110.3 MTRF1LP2 chr8 129728744 129730445 + processed_pseudogene KNOWN OTTHUMG00000160430.1 1702 1122 3 ENSG00000147697.7 GSDMC chr8 129748196 129786888 - protein_coding KNOWN OTTHUMG00000164851.1 38693 2934 38 ENSG00000254317.1 RP11-473O4.5 chr8 129832301 129844504 + antisense NOVEL OTTHUMG00000164852.1 12204 917 3 ENSG00000153310.17 FAM49B chr8 129839593 130017129 - protein_coding KNOWN OTTHUMG00000164805.3 177537 9131 241 ENSG00000243402.1 RP11-473O4.1 chr8 129864478 129865052 + processed_pseudogene KNOWN OTTHUMG00000158707.1 575 575 1 ENSG00000200075.1 SNORA25 chr8 129868590 129868716 - snoRNA NOVEL NA 127 127 1 ENSG00000254263.1 RP11-473O4.4 chr8 129890465 129901758 + lincRNA NOVEL OTTHUMG00000164853.1 11294 467 2 ENSG00000253720.1 RP11-473O4.3 chr8 129939856 129949394 + lincRNA NOVEL OTTHUMG00000164854.1 9539 549 4 ENSG00000215866.6 LINC01356 chr1 112820170 112850643 - lincRNA NOVEL OTTHUMG00000012022.3 30474 1823 16 ENSG00000253043.1 RNU7-181P chr8 130004528 130004601 - snRNA KNOWN NA 74 74 1 ENSG00000264653.1 MIR5194 chr8 130008334 130008453 - miRNA KNOWN NA 120 120 1 ENSG00000153317.13 ASAP1 chr8 130052104 130443660 - protein_coding KNOWN OTTHUMG00000164772.2 391557 8280 187 ENSG00000200304.1 RNU6-1255P chr8 130069541 130069652 - snRNA KNOWN NA 112 112 1 ENSG00000280543.1 ASAP1-IT2 chr8 130082738 130084768 - sense_intronic KNOWN OTTHUMG00000189586.1 2031 2031 1 ENSG00000212342.1 SNORA12 chr8 130162972 130163127 + snoRNA NOVEL NA 156 156 1 ENSG00000253656.1 KB-1568E2.1 chr8 130595299 130655712 - lincRNA NOVEL OTTHUMG00000164773.1 60414 2072 3 ENSG00000155897.8 ADCY8 chr8 130780301 131042426 - protein_coding KNOWN OTTHUMG00000164756.1 262126 5961 40 ENSG00000253259.1 RP11-737F9.2 chr8 130892070 130892785 - sense_intronic NOVEL OTTHUMG00000164757.1 716 474 2 ENSG00000253992.1 RP11-737F9.1 chr8 130935409 130949665 + antisense NOVEL OTTHUMG00000164758.1 14257 411 3 ENSG00000224167.1 RP3-522D1.1 chr1 112850028 112877871 + lincRNA NOVEL OTTHUMG00000012023.1 27844 587 5 ENSG00000253407.1 RP11-381I15.1 chr8 131130388 131144881 - lincRNA NOVEL OTTHUMG00000164759.1 14494 491 3 ENSG00000253507.4 CTD-2501M5.1 chr8 131308545 131317632 + lincRNA NOVEL OTTHUMG00000164760.1 9088 984 14 ENSG00000252158.1 SNORA72 chr8 131432776 131432869 - snoRNA NOVEL NA 94 94 1 ENSG00000254255.1 CTD-2008O4.1 chr8 131712512 131712980 + processed_pseudogene KNOWN OTTHUMG00000164747.1 469 469 1 ENSG00000132294.12 EFR3A chr8 131904088 132013642 + protein_coding KNOWN OTTHUMG00000150552.3 109555 6106 72 ENSG00000253117.4 OC90 chr8 132024220 132059380 - protein_coding KNOWN OTTHUMG00000164672.1 35161 1782 14 ENSG00000258417.3 RP11-240B13.2 chr8 132024238 132085655 - protein_coding NOVEL OTTHUMG00000170745.1 61418 2413 18 ENSG00000132297.10 HHLA1 chr8 132061486 132111159 - protein_coding KNOWN OTTHUMG00000140390.3 49674 6143 40 ENSG00000184156.14 KCNQ3 chr8 132120859 132480953 - protein_coding KNOWN OTTHUMG00000137472.3 360095 12478 75 ENSG00000253521.1 HPYR1 chr8 132560498 132561479 - lincRNA KNOWN OTTHUMG00000164645.1 982 982 1 ENSG00000228040.1 RP3-522D1.2 chr1 112890767 112890922 - processed_pseudogene KNOWN OTTHUMG00000012134.1 156 156 1 ENSG00000129295.7 LRRC6 chr8 132571953 132675617 - protein_coding KNOWN OTTHUMG00000164646.3 103665 2778 101 ENSG00000222570.1 AF216667.1 chr8 132680900 132681002 - miRNA NOVEL NA 103 103 1 ENSG00000165071.13 TMEM71 chr8 132685007 132760712 - protein_coding KNOWN OTTHUMG00000164647.2 75706 3332 61 ENSG00000129292.19 PHF20L1 chr8 132775358 132848807 + protein_coding KNOWN OTTHUMG00000148656.5 73450 20571 198 ENSG00000270137.1 CTC-137K3.1 chr8 132826179 132826903 + sense_intronic NOVEL OTTHUMG00000184050.1 725 725 1 ENSG00000223697.3 AF230666.2 chr8 132838117 132844298 - antisense NOVEL OTTHUMG00000148655.3 6182 1483 5 ENSG00000042832.10 TG chr8 132866958 133134903 + protein_coding KNOWN OTTHUMG00000164649.1 267946 11132 194 ENSG00000240237.1 CTD-2182N23.1 chr8 133002605 133003075 - processed_pseudogene KNOWN OTTHUMG00000158706.1 471 471 1 ENSG00000155926.12 SLA chr8 133036724 133103054 - protein_coding KNOWN OTTHUMG00000164439.2 66331 7637 115 ENSG00000276961.1 MIR7848 chr8 133046481 133046581 - miRNA KNOWN NA 101 101 1 ENSG00000270171.1 RP11-338N10.1 chr1 7693124 7694844 - lincRNA NOVEL OTTHUMG00000183917.1 1721 1721 1 ENSG00000155380.10 SLC16A1 chr1 112911847 112957013 - protein_coding KNOWN OTTHUMG00000012129.1 45167 5312 27 ENSG00000104415.12 WISP1 chr8 133191039 133230344 + protein_coding KNOWN OTTHUMG00000164440.2 39306 3844 17 ENSG00000270132.1 WISP1-OT1 chr8 133229056 133229697 + sense_intronic NOVEL OTTHUMG00000184142.1 642 642 1 ENSG00000104419.13 NDRG1 chr8 133237171 133302022 - protein_coding KNOWN OTTHUMG00000164441.2 64852 9823 224 ENSG00000243537.1 CTC-458A3.1 chr8 133325997 133326404 + processed_pseudogene KNOWN OTTHUMG00000158698.2 408 408 1 ENSG00000253638.1 CTC-369M3.1 chr8 133392211 133392690 - processed_pseudogene KNOWN OTTHUMG00000164532.1 480 480 1 ENSG00000225259.4 ST13P6 chr8 133408006 133409107 + processed_pseudogene KNOWN OTTHUMG00000164533.1 1102 1102 1 ENSG00000008513.13 ST3GAL1 chr8 133454848 133571940 - protein_coding KNOWN OTTHUMG00000164534.1 117093 8729 66 ENSG00000261220.2 RP11-629O1.2 chr8 133573183 133573861 + lincRNA NOVEL OTTHUMG00000173496.2 679 679 1 ENSG00000212273.1 SNORA40 chr8 133644598 133644725 - snoRNA NOVEL NA 128 128 1 ENSG00000276193.1 Metazoa_SRP chr8 133668420 133668701 - misc_RNA NOVEL NA 282 282 1 ENSG00000229020.4 AKR7A2P1 chr1 112923423 112924337 + processed_pseudogene KNOWN OTTHUMG00000012135.2 915 915 1 ENSG00000253970.1 MTND2P7 chr8 133754811 133755450 + processed_pseudogene KNOWN OTTHUMG00000164535.1 640 640 1 ENSG00000253916.1 CTD-2309H9.2 chr8 133755845 133756646 + processed_pseudogene KNOWN OTTHUMG00000164536.1 802 802 1 ENSG00000253561.1 CTD-2588J1.1 chr8 133771409 133814537 + lincRNA NOVEL OTTHUMG00000164537.1 43129 566 3 ENSG00000253165.1 CTD-2309H9.3 chr8 133775551 133777352 - lincRNA NOVEL OTTHUMG00000164538.1 1802 1041 3 ENSG00000254313.1 CTD-2309H9.4 chr8 133786093 133786268 - processed_pseudogene KNOWN OTTHUMG00000164539.1 176 176 1 ENSG00000253593.2 RP11-157E21.1 chr8 133886496 133902407 + lincRNA NOVEL OTTHUMG00000164540.2 15912 582 4 ENSG00000277576.1 RP11-157E21.3 chr8 133946677 133947335 + unprocessed_pseudogene KNOWN OTTHUMG00000187751.1 659 659 1 ENSG00000271240.1 RP11-157E21.2 chr8 133962992 133963259 - processed_pseudogene KNOWN OTTHUMG00000184576.1 268 268 1 ENSG00000253627.1 RP11-513H8.1 chr8 134211865 134320447 - lincRNA NOVEL OTTHUMG00000164320.1 108583 426 2 ENSG00000066827.14 ZFAT chr8 134477788 134713049 - protein_coding KNOWN OTTHUMG00000164321.1 235262 8900 170 ENSG00000226419.5 SLC16A1-AS1 chr1 112956415 112999496 + antisense NOVEL OTTHUMG00000012128.2 43082 9471 12 ENSG00000276140.1 ZFAT-AS1_1 chr8 134598071 134598149 + misc_RNA NOVEL NA 79 79 1 ENSG00000248492.1 ZFAT-AS1 chr8 134598071 134600689 + antisense KNOWN OTTHUMG00000164323.1 2619 939 2 ENSG00000277732.1 ZFAT-AS1_2 chr8 134598318 134598518 + misc_RNA NOVEL NA 201 201 1 ENSG00000278454.1 ZFAT-AS1_3 chr8 134600257 134600336 + misc_RNA NOVEL NA 80 80 1 ENSG00000271048.1 CTD-2342N23.2 chr8 134673131 134673512 + processed_pseudogene KNOWN OTTHUMG00000184575.1 382 382 1 ENSG00000272456.1 CTD-2342N23.3 chr8 134722947 134723949 + lincRNA NOVEL OTTHUMG00000185623.1 1003 1003 1 ENSG00000278898.1 CTD-2342N23.1 chr8 134764809 134767276 + TEC KNOWN OTTHUMG00000172340.1 2468 2468 1 ENSG00000279518.1 AC083843.4 chr8 134783694 134785879 - TEC KNOWN OTTHUMG00000172341.1 2186 2186 1 ENSG00000259820.1 AC083843.1 chr8 134792020 134798272 - lincRNA NOVEL OTTHUMG00000164324.1 6253 6253 1 ENSG00000207582.1 MIR30B chr8 134800520 134800607 - miRNA KNOWN NA 88 88 1 ENSG00000236066.4 RP11-389O22.1 chr1 113008254 113047055 + lincRNA KNOWN OTTHUMG00000012131.1 38802 543 4 ENSG00000199153.1 MIR30D chr8 134804876 134804945 - miRNA KNOWN NA 70 70 1 ENSG00000254028.1 AC083843.2 chr8 134832747 134834482 + lincRNA NOVEL OTTHUMG00000164325.1 1736 849 2 ENSG00000253433.1 NCRNA00250 chr8 134838069 134842637 + lincRNA NOVEL OTTHUMG00000164326.1 4569 519 3 ENSG00000251218.1 RP11-1057B8.2 chr8 134849935 134881899 + lincRNA NOVEL OTTHUMG00000164327.1 31965 2096 3 ENSG00000244413.1 RP11-1057B8.1 chr8 134978827 134979279 - processed_pseudogene KNOWN OTTHUMG00000158697.1 453 453 1 ENSG00000254083.4 RP11-452N4.1 chr8 135234131 135299719 + lincRNA NOVEL OTTHUMG00000164328.1 65589 1240 15 ENSG00000265266.1 AC022681.1 chr8 135239790 135239859 + miRNA NOVEL NA 70 70 1 ENSG00000254372.1 RP11-343P9.1 chr8 135455865 135456952 - antisense NOVEL OTTHUMG00000164166.1 1088 318 3 ENSG00000131773.12 KHDRBS3 chr8 135457457 135656722 + protein_coding KNOWN OTTHUMG00000164164.3 199266 8645 58 ENSG00000253915.1 MAPRE1P1 chr8 135625185 135625981 - processed_pseudogene KNOWN OTTHUMG00000164123.1 797 797 1 ENSG00000238198.1 RP11-31F15.2 chr1 113011687 113073105 - lincRNA KNOWN OTTHUMG00000012130.1 61419 2459 3 ENSG00000199652.2 RNU1-35P chr8 135742343 135742495 - snRNA KNOWN NA 153 153 1 ENSG00000253248.4 RP11-149P24.1 chr8 136047021 136166122 + lincRNA NOVEL OTTHUMG00000164124.1 119102 726 9 ENSG00000253839.1 RP11-431D12.1 chr8 136489448 136529876 + lincRNA NOVEL OTTHUMG00000164125.1 40429 564 4 ENSG00000254101.4 RP11-30J20.1 chr8 136530798 136984935 + lincRNA NOVEL OTTHUMG00000164139.2 454138 2706 29 ENSG00000206678.1 RNU6-144P chr8 137105352 137105458 + snRNA KNOWN NA 107 107 1 ENSG00000274572.1 CTD-2025J6.1 chr8 137424904 137425021 - unprocessed_pseudogene KNOWN OTTHUMG00000187758.1 118 118 1 ENSG00000254076.1 CTD-3145H4.1 chr8 137696724 137698467 + processed_pseudogene KNOWN OTTHUMG00000164172.2 1744 1744 1 ENSG00000253288.1 RP11-238K6.1 chr8 137809444 138083570 - lincRNA NOVEL OTTHUMG00000164173.2 274127 4171 3 ENSG00000254361.1 RP11-238K6.2 chr8 137852327 137929044 + lincRNA NOVEL OTTHUMG00000164174.1 76718 541 3 ENSG00000253988.1 RP11-489O18.1 chr8 138063268 138073240 + lincRNA NOVEL OTTHUMG00000164175.1 9973 596 2 ENSG00000198799.10 LRIG2 chr1 113073209 113132260 + protein_coding KNOWN OTTHUMG00000012133.3 59052 12456 41 ENSG00000147724.10 FAM135B chr8 138130023 138496822 - protein_coding KNOWN OTTHUMG00000149864.4 366800 13625 90 ENSG00000169436.15 COL22A1 chr8 138588235 138914006 - protein_coding KNOWN OTTHUMG00000150035.2 325772 7830 172 ENSG00000276933.1 MIR7641-1 chr8 138803386 138803446 - miRNA KNOWN NA 61 61 1 ENSG00000253432.1 RP11-324F11.1 chr8 139096305 139102830 - lincRNA NOVEL OTTHUMG00000164180.1 6526 485 3 ENSG00000251744.1 SNORA25 chr8 139108430 139108534 + snoRNA NOVEL NA 105 105 1 ENSG00000253783.1 CTD-2534J5.1 chr8 139114193 139127953 - lincRNA NOVEL OTTHUMG00000164181.1 13761 552 3 ENSG00000254258.1 RP11-398H6.1 chr8 139460062 139463016 - lincRNA NOVEL OTTHUMG00000164182.1 2955 1037 2 ENSG00000275078.1 RP11-656A10.1 chr8 139508701 139508971 - unprocessed_pseudogene KNOWN OTTHUMG00000187759.1 271 271 1 ENSG00000169427.5 KCNK9 chr8 139600838 139703056 - protein_coding KNOWN OTTHUMG00000164186.3 102219 4449 16 ENSG00000167632.13 TRAPPC9 chr8 139730343 140458579 - protein_coding KNOWN OTTHUMG00000164187.6 728237 6849 121 ENSG00000281918.1 Metazoa_SRP chr1 113079537 113079847 + misc_RNA NOVEL NA 311 311 1 ENSG00000253574.4 RP11-284H18.1 chr8 139911238 139916620 + antisense NOVEL OTTHUMG00000164204.1 5383 549 5 ENSG00000250733.5 C8orf17 chr8 139931172 139933946 + TEC KNOWN OTTHUMG00000140391.2 2775 2775 2 ENSG00000274064.1 RP11-570L14.1 chr8 140039756 140041037 + processed_pseudogene KNOWN OTTHUMG00000187760.1 1282 1282 1 ENSG00000259891.1 CTA-204B4.2 chr8 140505813 140508043 - antisense NOVEL OTTHUMG00000164214.2 2231 2231 1 ENSG00000104472.8 CHRAC1 chr8 140511298 140517137 + protein_coding KNOWN OTTHUMG00000164207.2 5840 3301 12 ENSG00000123908.10 AGO2 chr8 140520156 140635619 - protein_coding KNOWN OTTHUMG00000164232.5 115464 15833 74 ENSG00000279766.1 RP11-642A1.2 chr8 140572142 140572812 - TEC KNOWN OTTHUMG00000164220.1 671 671 1 ENSG00000280326.1 RP11-642A1.1 chr8 140591684 140593201 + TEC KNOWN OTTHUMG00000164221.1 1518 1518 1 ENSG00000280303.2 ERICD chr8 140636281 140638283 + lincRNA KNOWN OTTHUMG00000164249.2 2003 2003 1 ENSG00000169398.18 PTK2 chr8 140657900 141002216 - protein_coding KNOWN OTTHUMG00000067438.23 344317 13742 550 ENSG00000237278.2 RLIMP2 chr1 113125321 113126883 - processed_pseudogene KNOWN OTTHUMG00000012132.2 1563 1563 1 ENSG00000254324.2 AC105235.1 chr8 140732565 140732676 - miRNA NOVEL NA 112 112 1 ENSG00000279786.1 CTD-2014D20.1 chr8 140820599 140822414 - TEC KNOWN OTTHUMG00000164255.1 1816 1816 1 ENSG00000281855.1 AC105009.1 chr8 140880336 140883127 + protein_coding NOVEL NA 2792 60 4 ENSG00000252864.1 RNA5SP278 chr8 140940562 140940663 + rRNA KNOWN NA 102 102 1 ENSG00000253266.1 RP11-128L5.1 chr8 141055290 141060596 + lincRNA NOVEL OTTHUMG00000164253.1 5307 1132 7 ENSG00000105339.9 DENND3 chr8 141117278 141195808 + protein_coding KNOWN OTTHUMG00000164775.11 78531 14670 154 ENSG00000253210.1 RP11-809O17.1 chr8 141126044 141129961 - antisense NOVEL OTTHUMG00000164774.1 3918 807 4 ENSG00000022567.8 SLC45A4 chr8 141207166 141308305 - protein_coding KNOWN OTTHUMG00000164393.3 101140 8608 32 ENSG00000280035.1 RP11-10J21.2 chr8 141224288 141226947 - TEC KNOWN OTTHUMG00000164476.1 2660 2660 1 ENSG00000253307.1 RP11-10J21.4 chr8 141252286 141253292 - antisense NOVEL OTTHUMG00000164479.1 1007 397 2 ENSG00000233839.1 RP11-389O22.4 chr1 113168994 113169403 + processed_pseudogene KNOWN OTTHUMG00000012184.1 410 410 1 ENSG00000254019.1 RP11-10J21.3 chr8 141254565 141256817 + antisense NOVEL OTTHUMG00000164478.1 2253 584 2 ENSG00000254197.1 RP11-10J21.5 chr8 141278228 141292862 + lincRNA NOVEL OTTHUMG00000164480.1 14635 294 2 ENSG00000254291.1 RP11-10J21.6 chr8 141326130 141327137 + antisense NOVEL OTTHUMG00000164481.1 1008 413 2 ENSG00000253595.4 LINC01300 chr8 141340549 141344621 + antisense NOVEL OTTHUMG00000164482.1 4073 812 7 ENSG00000261655.1 CTD-3064M3.3 chr8 141353403 141355365 - sense_overlapping NOVEL OTTHUMG00000164483.1 1963 1963 1 ENSG00000204882.3 GPR20 chr8 141356500 141367267 - protein_coding KNOWN OTTHUMG00000164484.1 10768 1515 2 ENSG00000244998.1 CTD-3064M3.4 chr8 141389939 141392574 - antisense NOVEL OTTHUMG00000164486.1 2636 1380 2 ENSG00000184489.10 PTP4A3 chr8 141391993 141432454 + protein_coding KNOWN OTTHUMG00000164490.1 40462 2877 28 ENSG00000226807.5 MROH5 chr8 141433829 141507230 - polymorphic_pseudogene KNOWN OTTHUMG00000155944.5 73402 4764 119 ENSG00000271959.1 CTD-3064M3.7 chr8 141434545 141437954 + antisense NOVEL OTTHUMG00000185625.1 3410 2961 3 ENSG00000236887.1 RP11-389O22.5 chr1 113198825 113199258 + processed_pseudogene KNOWN OTTHUMG00000012185.1 434 434 1 ENSG00000238854.1 SNORD5 chr8 141447475 141447549 + snoRNA NOVEL NA 75 75 1 ENSG00000253605.1 HNRNPA1P38 chr8 141459075 141460031 + processed_pseudogene KNOWN OTTHUMG00000164496.1 957 957 1 ENSG00000226490.1 AC138647.1 chr8 141514638 141518737 + lincRNA NOVEL OTTHUMG00000156281.1 4100 648 2 ENSG00000221123.1 AC104417.1 chr8 141945499 141945625 + miRNA NOVEL NA 127 127 1 ENSG00000254183.1 RP11-953B20.2 chr8 141968091 141968841 - processed_pseudogene KNOWN OTTHUMG00000164382.1 751 751 1 ENSG00000261710.1 RP11-953B20.1 chr8 142089827 142091619 + lincRNA NOVEL OTTHUMG00000164381.1 1793 1793 1 ENSG00000265247.1 MIR4472-1 chr8 142176339 142176418 + miRNA KNOWN NA 80 80 1 ENSG00000254008.1 LINC00051 chr8 142198356 142209003 + antisense KNOWN OTTHUMG00000164636.1 10648 1046 3 ENSG00000171045.13 TSNARE1 chr8 142212080 142403240 - protein_coding KNOWN OTTHUMG00000164867.4 191161 4070 69 ENSG00000253602.2 Metazoa_SRP chr8 142247585 142247866 - misc_RNA NOVEL NA 282 282 1 ENSG00000270035.1 RP11-338N10.2 chr1 7698303 7698872 - lincRNA NOVEL OTTHUMG00000183918.1 570 570 1 ENSG00000081026.17 MAGI3 chr1 113390749 113685923 + protein_coding KNOWN OTTHUMG00000011737.3 295175 8180 91 ENSG00000261693.1 RP13-467H17.1 chr8 142403652 142407028 + antisense NOVEL OTTHUMG00000164869.1 3377 3377 1 ENSG00000181790.9 BAI1 chr8 142449430 142545009 + protein_coding KNOWN OTTHUMG00000164732.3 95580 7356 111 ENSG00000232722.1 MROH4P chr8 142567260 142572005 - unitary_pseudogene KNOWN OTTHUMG00000154595.1 4746 848 6 ENSG00000198576.3 ARC chr8 142611044 142614472 - protein_coding KNOWN OTTHUMG00000134310.3 3429 2991 5 ENSG00000261044.1 AP006547.3 chr8 142620373 142621064 + antisense NOVEL OTTHUMG00000173438.1 692 692 1 ENSG00000277332.1 AC145123.2 chr8 142638596 142640648 + antisense NOVEL OTTHUMG00000164826.2 2053 503 2 ENSG00000234616.7 JRK chr8 142657460 142681968 - protein_coding KNOWN OTTHUMG00000160911.6 24509 11229 28 ENSG00000167653.4 PSCA chr8 142670308 142682724 + protein_coding KNOWN OTTHUMG00000162077.2 12417 1763 10 ENSG00000160886.12 LY6K chr8 142700111 142705127 + protein_coding KNOWN OTTHUMG00000164720.3 5017 4049 13 ENSG00000253741.1 CTD-2292P10.4 chr8 142702252 142726973 - antisense NOVEL OTTHUMG00000164731.1 24722 5684 3 ENSG00000232499.2 RP11-512F24.1 chr1 113449700 113450728 + processed_pseudogene KNOWN OTTHUMG00000011799.2 1029 1029 1 ENSG00000130193.7 THEM6 chr8 142727203 142736927 + protein_coding KNOWN OTTHUMG00000164673.1 9725 3055 7 ENSG00000253806.1 CTD-2292P10.2 chr8 142727283 142727690 - antisense NOVEL OTTHUMG00000164674.1 408 340 2 ENSG00000126233.1 SLURP1 chr8 142740944 142742411 - protein_coding KNOWN OTTHUMG00000164685.1 1468 537 3 ENSG00000197353.3 LYPD2 chr8 142750150 142752534 - protein_coding KNOWN OTTHUMG00000164686.1 2385 594 3 ENSG00000253196.1 RP11-706C16.7 chr8 142763116 142766427 + antisense NOVEL OTTHUMG00000164675.1 3312 670 2 ENSG00000180155.17 LYNX1 chr8 142764334 142778224 - protein_coding KNOWN OTTHUMG00000164694.5 13891 6039 38 ENSG00000167656.4 LY6D chr8 142784880 142786592 - protein_coding KNOWN OTTHUMG00000164693.1 1713 1553 9 ENSG00000253715.1 RP11-706C16.8 chr8 142785374 142812120 + antisense NOVEL OTTHUMG00000164676.1 26747 602 3 ENSG00000253728.4 RP11-706C16.5 chr8 142834138 142834940 - antisense NOVEL OTTHUMG00000164669.1 803 378 4 ENSG00000104499.5 GML chr8 142834247 142916506 + protein_coding KNOWN OTTHUMG00000164656.1 82260 940 9 ENSG00000238256.1 MTND5P20 chr1 113576757 113576899 - processed_pseudogene KNOWN OTTHUMG00000011801.1 143 143 1 ENSG00000253421.1 ZNHIT1P1 chr8 142858354 142858797 + processed_pseudogene KNOWN OTTHUMG00000164657.1 444 444 1 ENSG00000160882.10 CYP11B1 chr8 142872356 142879846 - protein_coding KNOWN OTTHUMG00000164637.2 7491 4206 39 ENSG00000179142.2 CYP11B2 chr8 142910559 142917843 - protein_coding KNOWN OTTHUMG00000160254.1 7285 2936 9 ENSG00000247317.3 RP11-273G15.2 chr8 142981738 143018437 - lincRNA NOVEL OTTHUMG00000164752.1 36700 3853 12 ENSG00000253971.1 CDC42P3 chr8 142995850 142996482 + processed_pseudogene KNOWN OTTHUMG00000164753.1 633 633 1 ENSG00000160932.9 LY6E chr8 143017982 143023832 + protein_coding KNOWN OTTHUMG00000164754.6 5851 2640 62 ENSG00000177335.9 C8orf31 chr8 143039209 143059942 + processed_transcript KNOWN OTTHUMG00000164771.2 20734 2929 35 ENSG00000250115.2 AK3P2 chr8 143057060 143057816 - processed_pseudogene KNOWN OTTHUMG00000160500.2 757 429 2 ENSG00000243328.1 RP11-520P18.1 chr8 143065915 143066587 - processed_pseudogene KNOWN OTTHUMG00000158696.1 673 344 2 ENSG00000261667.1 RP11-520P18.5 chr8 143080457 143083001 + protein_coding PUTATIVE OTTHUMG00000173037.1 2545 988 4 ENSG00000116793.14 PHTF1 chr1 113696831 113759489 - protein_coding KNOWN OTTHUMG00000011800.1 62659 7170 125 ENSG00000176956.11 LY6H chr8 143157914 143160711 - protein_coding KNOWN OTTHUMG00000154890.2 2798 1881 21 ENSG00000277494.1 GPIHBP1 chr8 143213193 143217170 + protein_coding KNOWN OTTHUMG00000164950.3 3978 2282 4 ENSG00000181638.16 ZFP41 chr8 143246821 143262705 + protein_coding KNOWN OTTHUMG00000164951.5 15885 6910 16 ENSG00000264668.1 ZFP41 chr8 143247110 143276403 + protein_coding NOVEL OTTHUMG00000179773.2 29294 2897 4 ENSG00000250571.5 GLI4 chr8 143267433 143276931 + protein_coding KNOWN OTTHUMG00000164952.5 9499 3057 32 ENSG00000253716.4 RP13-582O9.5 chr8 143280161 143281690 - antisense NOVEL OTTHUMG00000164976.1 1530 1405 12 ENSG00000185730.6 ZNF696 chr8 143289676 143298061 + protein_coding KNOWN OTTHUMG00000164957.2 8386 4012 20 ENSG00000272172.1 RP13-582O9.7 chr8 143290399 143290621 - antisense NOVEL OTTHUMG00000185627.1 223 223 1 ENSG00000184428.11 TOP1MT chr8 143304384 143359979 - protein_coding KNOWN OTTHUMG00000164979.6 55596 6441 143 ENSG00000263660.1 AC087793.1 chr8 143314921 143315006 + miRNA NOVEL NA 86 86 1 ENSG00000232450.1 RP4-730K3.3 chr1 113698884 113699631 - transcribed_processed_pseudogene KNOWN OTTHUMG00000011942.1 748 748 1 ENSG00000212221.1 RNU6-220P chr8 143350172 143350278 + snRNA KNOWN NA 107 107 1 ENSG00000254389.3 RHPN1-AS1 chr8 143366631 143368548 - antisense KNOWN OTTHUMG00000165005.1 1918 1918 1 ENSG00000158106.11 RHPN1 chr8 143368855 143384220 + protein_coding KNOWN OTTHUMG00000165006.2 15366 4204 51 ENSG00000253931.1 RP11-909N17.2 chr8 143412749 143417054 + antisense NOVEL OTTHUMG00000165016.1 4306 544 3 ENSG00000254338.1 MAFA-AS1 chr8 143417679 143419150 + antisense NOVEL OTTHUMG00000165017.1 1472 417 2 ENSG00000182759.3 MAFA chr8 143419182 143430406 - protein_coding KNOWN OTTHUMG00000165037.2 11225 2504 3 ENSG00000014164.6 ZC3H3 chr8 143437655 143541453 - protein_coding KNOWN OTTHUMG00000165127.2 103799 3731 14 ENSG00000254859.1 RP11-661A12.5 chr8 143541973 143549729 - antisense NOVEL OTTHUMG00000165128.1 7757 498 2 ENSG00000275558.1 7SK chr8 143542110 143542398 + misc_RNA NOVEL NA 289 289 1 ENSG00000254144.3 RP11-661A12.4 chr8 143542110 143542400 + antisense NOVEL OTTHUMG00000165015.1 291 291 1 ENSG00000081019.12 RSBN1 chr1 113761832 113812476 - protein_coding KNOWN OTTHUMG00000011938.3 50645 6819 40 ENSG00000104518.9 GSDMD chr8 143553207 143563062 + protein_coding KNOWN OTTHUMG00000165132.6 9856 5116 103 ENSG00000204839.7 MROH6 chr8 143566187 143572971 - protein_coding KNOWN OTTHUMG00000165164.3 6785 4408 54 ENSG00000255050.1 RP11-661A12.9 chr8 143573490 143577397 + antisense NOVEL OTTHUMG00000165158.1 3908 1173 5 ENSG00000147813.14 NAPRT chr8 143574785 143578649 - protein_coding KNOWN OTTHUMG00000156942.4 3865 3079 103 ENSG00000279605.1 RP11-661A12.8 chr8 143578358 143583304 + TEC KNOWN OTTHUMG00000165144.1 4947 4947 1 ENSG00000254741.1 RP11-661A12.7 chr8 143579636 143580670 + antisense NOVEL OTTHUMG00000165145.1 1035 431 2 ENSG00000104529.16 EEF1D chr8 143579697 143599541 - protein_coding KNOWN OTTHUMG00000165191.21 19845 9390 289 ENSG00000179886.5 TIGD5 chr8 143597835 143603224 + protein_coding KNOWN OTTHUMG00000162260.2 5390 5390 1 ENSG00000104524.12 PYCRL chr8 143603913 143609773 - protein_coding KNOWN OTTHUMG00000157010.5 5861 3244 39 ENSG00000104522.14 TSTA3 chr8 143612618 143618048 - protein_coding KNOWN OTTHUMG00000165159.4 5431 3622 86 ENSG00000231128.4 RP5-1073O3.2 chr1 113812379 113829171 + antisense NOVEL OTTHUMG00000011939.2 16793 1080 9 ENSG00000254812.1 RP11-661A12.12 chr8 143632071 143633756 - antisense NOVEL OTTHUMG00000165185.1 1686 701 2 ENSG00000183309.10 ZNF623 chr8 143636013 143656418 + protein_coding KNOWN OTTHUMG00000165186.4 20406 7146 5 ENSG00000181135.14 ZNF707 chr8 143684452 143713898 + protein_coding KNOWN OTTHUMG00000165146.1 29447 6327 139 ENSG00000181097.5 RP11-429J17.2 chr8 143696154 143698413 + antisense NOVEL OTTHUMG00000165147.1 2260 1963 2 ENSG00000255181.3 CCDC166 chr8 143706694 143708109 - protein_coding KNOWN OTTHUMG00000165148.2 1416 1320 2 ENSG00000254574.1 RP11-429J17.4 chr8 143709007 143713584 - antisense NOVEL OTTHUMG00000165149.1 4578 374 4 ENSG00000181085.13 MAPK15 chr8 143716259 143722458 + protein_coding KNOWN OTTHUMG00000146450.2 6200 3056 52 ENSG00000254548.1 RP11-429J17.5 chr8 143718246 143718891 - antisense NOVEL OTTHUMG00000165150.1 646 299 2 ENSG00000180921.6 FAM83H chr8 143723933 143733801 - protein_coding KNOWN OTTHUMG00000133559.2 9869 5654 7 ENSG00000265660.1 MIR4664 chr8 143733083 143733153 - miRNA KNOWN NA 71 71 1 ENSG00000134242.14 PTPN22 chr1 113813811 113871759 - protein_coding KNOWN OTTHUMG00000011936.2 57949 4503 148 ENSG00000203499.9 FAM83H-AS1 chr8 143734140 143746337 + lincRNA KNOWN OTTHUMG00000165151.1 12198 3229 7 ENSG00000254973.1 RP11-429J17.7 chr8 143758153 143771822 - lincRNA NOVEL OTTHUMG00000165152.1 13670 1809 3 ENSG00000214733.7 RP11-429J17.8 chr8 143788920 143790459 + antisense NOVEL OTTHUMG00000165153.1 1540 949 14 ENSG00000180900.15 SCRIB chr8 143790920 143815379 - protein_coding KNOWN OTTHUMG00000165154.4 24460 6192 141 ENSG00000216090.1 MIR937 chr8 143812957 143813042 - miRNA KNOWN NA 86 86 1 ENSG00000179950.12 PUF60 chr8 143816344 143829859 - protein_coding KNOWN OTTHUMG00000165155.1 13516 5424 163 ENSG00000255343.1 RP11-299M14.2 chr8 143833270 143834063 - 3prime_overlapping_ncrna NOVEL OTTHUMG00000165156.1 794 316 2 ENSG00000185189.14 NRBP2 chr8 143833594 143840974 - protein_coding KNOWN OTTHUMG00000165157.1 7381 4924 109 ENSG00000274094.1 MIR6845 chr8 143837756 143837816 - miRNA KNOWN NA 61 61 1 ENSG00000264144.1 AC234917.1 chr8 143844068 143844153 + miRNA NOVEL NA 86 86 1 ENSG00000226167.1 AP4B1-AS1 chr1 113856635 113901237 + antisense NOVEL OTTHUMG00000011941.1 44603 1734 5 ENSG00000261150.2 EPPK1 chr8 143857324 143878464 - protein_coding KNOWN OTTHUMG00000165206.3 21141 16002 3 ENSG00000178209.13 PLEC chr8 143915147 143976734 - protein_coding KNOWN OTTHUMG00000165291.3 61588 16991 333 ENSG00000207574.1 MIR661 chr8 143945191 143945279 - miRNA KNOWN NA 89 89 1 ENSG00000178685.12 PARP10 chr8 143977153 144012772 - protein_coding KNOWN OTTHUMG00000165408.2 35620 6033 112 ENSG00000178719.15 GRINA chr8 143990058 143993415 + protein_coding KNOWN OTTHUMG00000165433.1 3358 2527 44 ENSG00000186583.10 SPATC1 chr8 144012414 144047085 + protein_coding KNOWN OTTHUMG00000156976.2 34672 2007 9 ENSG00000204791.7 CTD-3065J16.6 chr8 144049129 144051522 + antisense NOVEL OTTHUMG00000165434.2 2394 1818 11 ENSG00000178814.14 OPLAH chr8 144051266 144063832 - protein_coding KNOWN OTTHUMG00000165435.5 12567 4319 37 ENSG00000277888.1 MIR6846 chr8 144057321 144057380 - miRNA KNOWN NA 60 60 1 ENSG00000255224.1 CTD-3065J16.9 chr8 144078002 144079265 - antisense NOVEL OTTHUMG00000165436.1 1264 1264 1 ENSG00000188761.10 BCL2L15 chr1 113878168 113887547 - protein_coding KNOWN OTTHUMG00000011940.2 9380 4251 17 ENSG00000178896.6 EXOSC4 chr8 144078626 144080647 + protein_coding KNOWN OTTHUMG00000165437.1 2022 1407 8 ENSG00000276472.1 MIR6847 chr8 144079874 144079942 + miRNA KNOWN NA 69 69 1 ENSG00000197858.9 GPAA1 chr8 144082590 144086216 + protein_coding KNOWN OTTHUMG00000165438.3 3627 3268 97 ENSG00000179091.4 CYC1 chr8 144095027 144097525 + protein_coding KNOWN OTTHUMG00000165242.1 2499 1975 18 ENSG00000179526.15 SHARPIN chr8 144098633 144108124 - protein_coding KNOWN OTTHUMG00000165243.1 9492 2783 46 ENSG00000179632.8 MAF1 chr8 144104499 144107611 + protein_coding KNOWN OTTHUMG00000165244.2 3113 2377 34 ENSG00000179698.12 KIAA1875 chr8 144107726 144118315 + protein_coding KNOWN OTTHUMG00000165245.2 10590 8967 82 ENSG00000235173.5 HGH1 chr8 144137769 144140843 + protein_coding KNOWN OTTHUMG00000165246.1 3075 2814 25 ENSG00000227473.1 TSSK5P chr8 144141214 144143664 - unitary_pseudogene KNOWN OTTHUMG00000154993.1 2451 907 7 ENSG00000179832.16 MROH1 chr8 144148016 144261940 + protein_coding KNOWN OTTHUMG00000165781.1 113925 10903 250 ENSG00000269978.1 RP11-338N10.3 chr1 7700704 7700970 - lincRNA NOVEL OTTHUMG00000183919.1 267 267 1 ENSG00000134262.11 AP4B1 chr1 113894748 113905201 - protein_coding KNOWN OTTHUMG00000011943.3 10454 5369 72 ENSG00000264721.1 AC104592.1 chr8 144155898 144155989 - miRNA NOVEL NA 92 92 1 ENSG00000261236.4 BOP1 chr8 144262102 144291370 - protein_coding KNOWN OTTHUMG00000174603.2 29269 3716 32 ENSG00000277158.1 MIR7112 chr8 144262673 144262737 - miRNA KNOWN NA 65 65 1 ENSG00000260428.2 SCX chr8 144266560 144268481 + protein_coding KNOWN OTTHUMG00000175582.2 1922 999 2 ENSG00000185122.9 HSF1 chr8 144291591 144314722 + protein_coding KNOWN OTTHUMG00000174604.2 23132 5307 85 ENSG00000185000.8 DGAT1 chr8 144314584 144326910 - protein_coding KNOWN OTTHUMG00000174606.3 12327 4131 65 ENSG00000254690.1 GS1-393G12.12 chr8 144314590 144315138 - antisense NOVEL OTTHUMG00000165271.1 549 444 2 ENSG00000276987.1 MIR6848 chr8 144317246 144317315 - miRNA KNOWN NA 70 70 1 ENSG00000261678.2 SCRT1 chr8 144330565 144336281 - protein_coding KNOWN OTTHUMG00000165229.4 5717 3779 2 ENSG00000261587.2 TMEM249 chr8 144352219 144354914 - protein_coding KNOWN OTTHUMG00000165167.3 2696 2234 11 ENSG00000118655.4 DCLRE1B chr1 113905141 113914086 + protein_coding KNOWN OTTHUMG00000011937.2 8946 3940 8 ENSG00000271698.1 TMEM249 chr8 144353228 144355609 - protein_coding NOVEL OTTHUMG00000184228.2 2382 1596 6 ENSG00000185803.7 SLC52A2 chr8 144354135 144361272 + protein_coding KNOWN OTTHUMG00000165168.2 7138 2926 49 ENSG00000182325.9 FBXL6 chr8 144355431 144359376 - protein_coding KNOWN OTTHUMG00000165169.2 3946 3375 47 ENSG00000173137.10 ADCK5 chr8 144373101 144393242 + protein_coding KNOWN OTTHUMG00000165190.5 20142 2742 64 ENSG00000071894.13 CPSF1 chr8 144393229 144409349 - protein_coding KNOWN OTTHUMG00000174612.3 16121 6072 128 ENSG00000216133.1 MIR939 chr8 144394149 144394230 - miRNA KNOWN NA 82 82 1 ENSG00000266624.1 MIR1234 chr8 144400086 144400165 - miRNA KNOWN NA 80 80 1 ENSG00000274683.1 MIR6849 chr8 144400277 144400345 - miRNA KNOWN NA 69 69 1 ENSG00000272115.1 GS1-393G12.14 chr8 144409492 144409976 + antisense NOVEL OTTHUMG00000185629.1 485 485 1 ENSG00000147804.8 SLC39A4 chr8 144409742 144416895 - protein_coding KNOWN OTTHUMG00000165208.3 7154 5033 49 ENSG00000235527.5 HIPK1-AS1 chr1 113924000 113929492 - antisense NOVEL OTTHUMG00000011982.2 5493 3087 12 ENSG00000160948.12 VPS28 chr8 144423601 144428563 - protein_coding KNOWN OTTHUMG00000165209.4 4963 3769 107 ENSG00000160949.15 TONSL chr8 144428775 144444444 - protein_coding KNOWN OTTHUMG00000153122.3 15670 7111 63 ENSG00000276598.1 MIR6893 chr8 144435551 144435619 - miRNA KNOWN NA 69 69 1 ENSG00000232600.3 AC084125.4 chr8 144437675 144439971 + antisense NOVEL OTTHUMG00000153175.1 2297 428 4 ENSG00000187954.11 CYHR1 chr8 144449582 144465677 - protein_coding KNOWN OTTHUMG00000165171.2 16096 9787 38 ENSG00000254578.1 CTD-2517M22.16 chr8 144463817 144465101 + antisense NOVEL OTTHUMG00000165651.1 1285 429 2 ENSG00000167702.10 KIFC2 chr8 144466043 144474202 + protein_coding KNOWN OTTHUMG00000165133.5 8160 4447 35 ENSG00000160973.7 FOXH1 chr8 144473412 144476335 - protein_coding KNOWN OTTHUMG00000165172.1 2924 2503 6 ENSG00000160972.8 PPP1R16A chr8 144477969 144502121 + protein_coding KNOWN OTTHUMG00000165173.3 24153 5414 57 ENSG00000255182.2 CTD-2517M22.14 chr8 144495458 144505444 - processed_transcript NOVEL OTTHUMG00000165174.2 9987 4894 14 ENSG00000163349.20 HIPK1 chr1 113929192 113977869 + protein_coding KNOWN OTTHUMG00000011983.5 48678 9280 136 ENSG00000167701.12 GPT chr8 144502973 144507174 + protein_coding KNOWN OTTHUMG00000165176.2 4202 2756 43 ENSG00000167700.7 MFSD3 chr8 144509074 144511213 + protein_coding KNOWN OTTHUMG00000165177.2 2140 1823 12 ENSG00000160957.11 RECQL4 chr8 144511288 144517845 - protein_coding KNOWN OTTHUMG00000165178.5 6558 4236 82 ENSG00000265393.1 CTD-2517M22.17 chr8 144512567 144513672 + antisense NOVEL OTTHUMG00000179578.1 1106 338 2 ENSG00000160959.6 LRRC14 chr8 144517992 144525178 + protein_coding KNOWN OTTHUMG00000165179.2 7187 6136 27 ENSG00000254402.5 LRRC24 chr8 144522377 144527032 - protein_coding KNOWN OTTHUMG00000165180.2 4656 1772 10 ENSG00000213563.5 C8orf82 chr8 144525733 144529132 - protein_coding KNOWN OTTHUMG00000165181.1 3400 3001 14 ENSG00000147799.10 ARHGAP39 chr8 144529179 144605816 - protein_coding KNOWN OTTHUMG00000165182.1 76638 4888 24 ENSG00000265295.1 AC084125.1 chr8 144567307 144567392 + miRNA NOVEL NA 86 86 1 ENSG00000255456.1 CTD-2517M22.9 chr8 144584040 144586488 + antisense NOVEL OTTHUMG00000165183.1 2449 398 2 ENSG00000116774.10 OLFML3 chr1 113979391 113982254 + protein_coding KNOWN OTTHUMG00000011980.1 2864 2444 12 ENSG00000274772.1 Metazoa_SRP chr8 144683169 144683464 + misc_RNA NOVEL NA 296 296 1 ENSG00000254533.1 AF186192.1 chr8 144698614 144699185 - lincRNA NOVEL OTTHUMG00000165187.1 572 572 1 ENSG00000255085.7 AF186192.5 chr8 144700353 144708517 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000165188.3 8165 1680 12 ENSG00000263612.1 AF186192.6 chr8 144713899 144714845 + lincRNA NOVEL OTTHUMG00000179572.1 947 947 1 ENSG00000198169.7 ZNF251 chr8 144720907 144756417 - protein_coding KNOWN OTTHUMG00000165189.3 35511 4939 14 ENSG00000196378.10 ZNF34 chr8 144773114 144787345 - protein_coding KNOWN OTTHUMG00000165248.1 14232 2222 25 ENSG00000244307.3 RN7SL395P chr8 144785298 144785588 + misc_RNA KNOWN NA 291 291 1 ENSG00000161016.14 RPL8 chr8 144789765 144792587 - protein_coding KNOWN OTTHUMG00000165249.2 2823 2159 65 ENSG00000274673.1 MIR6850 chr8 144791931 144791991 - miRNA KNOWN NA 61 61 1 ENSG00000197363.8 ZNF517 chr8 144798876 144811169 + protein_coding KNOWN OTTHUMG00000165199.1 12294 5308 35 ENSG00000270780.1 RP4-590F24.1 chr1 114001433 114002235 - processed_pseudogene KNOWN OTTHUMG00000184325.1 803 565 2 ENSG00000147789.14 ZNF7 chr8 144827464 144847509 + protein_coding KNOWN OTTHUMG00000165200.1 20046 10296 80 ENSG00000170619.9 COMMD5 chr8 144841042 144853736 - protein_coding KNOWN OTTHUMG00000165251.3 12695 2917 14 ENSG00000263640.1 AF235103.1 chr8 144853413 144853522 + miRNA NOVEL NA 110 110 1 ENSG00000196150.12 ZNF250 chr8 144876497 144902168 - protein_coding KNOWN OTTHUMG00000165252.2 25672 7357 56 ENSG00000170631.13 ZNF16 chr8 144930358 144950888 - protein_coding KNOWN OTTHUMG00000165253.1 20531 5237 26 ENSG00000196922.9 ZNF252P chr8 144973589 145002895 - unitary_pseudogene KNOWN OTTHUMG00000165201.6 29307 9148 25 ENSG00000255164.1 RP5-1047A19.4 chr8 144992914 144994837 + antisense NOVEL OTTHUMG00000165202.1 1924 439 2 ENSG00000254618.1 TMED10P1 chr8 144994886 144995540 + processed_pseudogene KNOWN OTTHUMG00000165203.1 655 655 1 ENSG00000255559.1 ZNF252P-AS1 chr8 145002811 145006046 + antisense KNOWN OTTHUMG00000165204.1 3236 3236 1 ENSG00000255530.1 RP5-1047A19.6 chr8 145005561 145005906 - processed_pseudogene KNOWN OTTHUMG00000165205.1 346 346 1 ENSG00000134207.13 SYT6 chr1 114089291 114153919 - protein_coding KNOWN OTTHUMG00000011755.3 64629 5104 54 ENSG00000255000.1 AC139103.1 chr8 145047860 145048889 + processed_pseudogene KNOWN OTTHUMG00000165255.1 1030 1030 1 ENSG00000182307.11 C8orf33 chr8 145052378 145056030 + protein_coding KNOWN OTTHUMG00000165256.1 3653 3378 19 ENSG00000236875.3 DDX11L5 chr9 12134 13783 + unprocessed_pseudogene KNOWN OTTHUMG00000019419.2 1650 654 6 ENSG00000181404.15 WASH1 chr9 14521 29739 - protein_coding KNOWN OTTHUMG00000019420.3 15219 1827 11 ENSG00000275076.1 AL928970.1 chr9 17480 17547 - miRNA NOVEL NA 68 68 1 ENSG00000227518.3 XXyac-YRM2039.3 chr9 27657 30891 + antisense NOVEL OTTHUMG00000019418.1 3235 2923 2 ENSG00000278579.1 MIR1302-2 chr9 30144 30281 + miRNA KNOWN NA 138 138 1 ENSG00000218839.4 FAM138C chr9 34394 35871 - lincRNA KNOWN OTTHUMG00000019422.3 1478 1232 5 ENSG00000277631.3 PGM5P3-AS1 chr9 72674 88826 + lincRNA NOVEL OTTHUMG00000019423.2 16153 2003 20 ENSG00000227917.2 RP11-143M1.3 chr9 100804 102941 - lincRNA NOVEL OTTHUMG00000021018.2 2138 772 5 ENSG00000232895.2 RP4-543J13.1 chr1 114206427 114262278 - lincRNA NOVEL OTTHUMG00000011899.2 55852 332 2 ENSG00000231808.2 LINC01388 chr9 112713 113754 - lincRNA NOVEL OTTHUMG00000019424.2 1042 416 2 ENSG00000170122.5 FOXD4 chr9 116231 118204 - protein_coding KNOWN OTTHUMG00000021015.2 1974 1974 1 ENSG00000172785.17 CBWD1 chr9 121038 179147 - protein_coding KNOWN OTTHUMG00000019425.5 58110 14170 271 ENSG00000183784.6 C9orf66 chr9 212824 215741 - protein_coding KNOWN OTTHUMG00000021017.1 2918 2918 1 ENSG00000107099.14 DOCK8 chr9 214854 465259 + protein_coding KNOWN OTTHUMG00000078789.8 250406 13784 329 ENSG00000235880.1 RP11-59O6.3 chr9 267966 273002 - antisense NOVEL OTTHUMG00000019426.1 5037 406 2 ENSG00000227155.6 RP11-165F24.3 chr9 452492 492248 - antisense NOVEL OTTHUMG00000019427.4 39757 4016 57 ENSG00000107104.17 KANK1 chr9 470291 746106 + protein_coding KNOWN OTTHUMG00000019434.6 275816 11908 87 ENSG00000235330.2 RP11-165F24.2 chr9 477750 478423 + transcribed_processed_pseudogene KNOWN OTTHUMG00000019430.2 674 674 2 ENSG00000228115.1 RP11-165F24.5 chr9 487774 495610 + sense_intronic NOVEL OTTHUMG00000019429.1 7837 403 2 ENSG00000273698.1 RP4-543J13.2 chr1 114279011 114279275 - processed_pseudogene KNOWN OTTHUMG00000187529.1 265 265 1 ENSG00000226403.1 RP11-31F19.1 chr9 547317 549531 + sense_intronic NOVEL OTTHUMG00000019431.1 2215 450 4 ENSG00000202172.1 RNU6-1327P chr9 558826 558930 + snRNA KNOWN NA 105 105 1 ENSG00000229875.1 EIF1P1 chr9 659986 660326 + processed_pseudogene KNOWN OTTHUMG00000019432.2 341 341 1 ENSG00000227914.3 RP11-130C19.3 chr9 673478 685555 - antisense NOVEL OTTHUMG00000019433.3 12078 1207 5 ENSG00000137090.10 DMRT1 chr9 841690 969090 + protein_coding KNOWN OTTHUMG00000019435.2 127401 3253 13 ENSG00000064218.4 DMRT3 chr9 976964 991731 + protein_coding KNOWN OTTHUMG00000019436.1 14768 2387 3 ENSG00000252991.1 RNU6-1073P chr9 1001858 1001963 - snRNA KNOWN NA 106 106 1 ENSG00000228783.1 RP11-147I11.1 chr9 1011085 1011799 + processed_pseudogene KNOWN OTTHUMG00000019438.1 715 392 2 ENSG00000281769.1 LINC01230 chr9 1045625 1048641 + lincRNA KNOWN OTTHUMG00000189515.1 3017 3017 1 ENSG00000173253.13 DMRT2 chr9 1050354 1057552 + protein_coding KNOWN OTTHUMG00000019437.1 7199 2925 25 ENSG00000271419.1 RP4-591B8.3 chr1 114353986 114355178 + processed_pseudogene KNOWN OTTHUMG00000184330.1 1193 864 2 ENSG00000224836.1 RP11-341G2.3 chr9 1151807 1152140 - processed_pseudogene KNOWN OTTHUMG00000019441.1 334 334 1 ENSG00000236594.2 RPS27AP14 chr9 1164414 1164867 - processed_pseudogene KNOWN OTTHUMG00000019440.2 454 454 1 ENSG00000233575.2 RP11-459D20.1 chr9 1328664 1328987 + processed_pseudogene KNOWN OTTHUMG00000019442.2 324 324 1 ENSG00000202383.1 RNA5SP279 chr9 1333837 1333953 + rRNA KNOWN NA 117 117 1 ENSG00000224092.1 RP11-443B9.1 chr9 1977784 1978547 - processed_pseudogene KNOWN OTTHUMG00000019443.1 764 764 1 ENSG00000080503.18 SMARCA2 chr9 2015219 2193624 + protein_coding KNOWN OTTHUMG00000019445.2 178406 7255 214 ENSG00000236199.1 RP11-264I13.2 chr9 2041900 2046023 - antisense NOVEL OTTHUMG00000019444.1 4124 420 2 ENSG00000222973.1 RNU2-25P chr9 2162763 2162953 - snRNA KNOWN NA 191 191 1 ENSG00000264615.2 RN7SL592P chr9 2228961 2229241 - misc_RNA KNOWN NA 281 281 1 ENSG00000236404.7 VLDLR-AS1 chr9 2422702 2643359 - antisense NOVEL OTTHUMG00000019448.2 220658 4688 30 ENSG00000049245.11 VAMP3 chr1 7771269 7781432 + protein_coding KNOWN OTTHUMG00000001225.3 10164 2760 12 ENSG00000197323.9 TRIM33 chr1 114392777 114511160 - protein_coding KNOWN OTTHUMG00000011891.2 118384 9574 84 ENSG00000231052.1 RP11-91N2.3 chr9 2541097 2541635 + lincRNA NOVEL OTTHUMG00000019446.1 539 206 2 ENSG00000147852.14 VLDLR chr9 2621834 2660053 + protein_coding KNOWN OTTHUMG00000019447.3 38220 9339 43 ENSG00000168263.8 KCNV2 chr9 2717502 2730037 + protein_coding KNOWN OTTHUMG00000019449.1 12536 2186 2 ENSG00000080608.9 KIAA0020 chr9 2720469 2844241 - protein_coding KNOWN OTTHUMG00000019450.4 123773 2707 26 ENSG00000236496.2 GPS2P1 chr9 2875442 2876427 - processed_pseudogene KNOWN OTTHUMG00000019451.2 986 986 1 ENSG00000229184.2 ATP5HP2 chr9 2900320 2900804 - processed_pseudogene KNOWN OTTHUMG00000019452.2 485 485 1 ENSG00000227835.7 CARM1P1 chr9 2907073 3053408 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000019453.3 146336 1656 22 ENSG00000221450.3 AL589675.1 chr9 2924321 2924407 - miRNA NOVEL NA 87 87 1 ENSG00000236511.1 LINC01231 chr9 3181589 3198517 + lincRNA NOVEL OTTHUMG00000019454.1 16929 886 4 ENSG00000080298.14 RFX3 chr9 3218297 3526004 - protein_coding KNOWN OTTHUMG00000019456.1 307708 11169 94 ENSG00000226984.1 RP4-591B8.2 chr1 114459934 114460360 + processed_pseudogene KNOWN OTTHUMG00000011895.1 427 427 1 ENSG00000215297.3 RP11-62E14.2 chr9 3364329 3364792 - processed_pseudogene KNOWN OTTHUMG00000019455.1 464 464 1 ENSG00000279745.1 AL365202.1 chr9 3452305 3453987 - protein_coding KNOWN NA 1683 294 3 ENSG00000232104.3 RFX3-AS1 chr9 3526723 3691814 + lincRNA NOVEL OTTHUMG00000019457.3 165092 1562 13 ENSG00000237359.1 RP11-509J21.2 chr9 3647335 3648338 + lincRNA NOVEL OTTHUMG00000019458.1 1004 728 2 ENSG00000226669.2 RP11-509J21.4 chr9 3684076 3689626 - lincRNA NOVEL OTTHUMG00000019460.2 5551 679 2 ENSG00000107249.20 GLIS3 chr9 3824127 4348392 - protein_coding KNOWN OTTHUMG00000019463.4 524266 11558 76 ENSG00000236724.1 RP11-252M18.3 chr9 3875584 3878809 + antisense NOVEL OTTHUMG00000153514.1 3226 243 2 ENSG00000237009.2 GLIS3-AS1 chr9 3898642 3901248 + antisense KNOWN OTTHUMG00000019461.1 2607 734 2 ENSG00000230001.1 RP11-70J12.1 chr9 4070906 4071884 - sense_intronic NOVEL OTTHUMG00000019462.1 979 635 2 ENSG00000228322.1 RP11-358M14.2 chr9 4299390 4306046 + antisense NOVEL OTTHUMG00000019464.1 6657 873 2 ENSG00000225650.2 EIF2S2P5 chr1 114468315 114469282 + processed_pseudogene KNOWN OTTHUMG00000011896.2 968 968 1 ENSG00000221730.1 AL162419.1 chr9 4378423 4378494 - miRNA NOVEL NA 72 72 1 ENSG00000200941.1 RNU6-694P chr9 4386410 4386556 - snRNA KNOWN NA 147 147 1 ENSG00000106688.10 SLC1A1 chr9 4490444 4587469 + protein_coding KNOWN OTTHUMG00000019468.1 97026 3998 20 ENSG00000106686.15 SPATA6L chr9 4553386 4666674 - protein_coding KNOWN OTTHUMG00000019469.3 113289 7361 116 ENSG00000225893.1 RP11-6J24.3 chr9 4633027 4633756 + processed_pseudogene KNOWN OTTHUMG00000019470.1 730 730 1 ENSG00000205808.5 PPAPDC2 chr9 4662315 4665258 + protein_coding KNOWN OTTHUMG00000019466.2 2944 2944 1 ENSG00000273061.1 CDC37L1-AS1 chr9 4676600 4679502 - lincRNA NOVEL OTTHUMG00000185906.2 2903 613 4 ENSG00000106993.10 CDC37L1 chr9 4679559 4708398 + protein_coding KNOWN OTTHUMG00000019465.1 28840 3949 16 ENSG00000147853.15 AK3 chr9 4709559 4742043 - protein_coding KNOWN OTTHUMG00000019472.2 32485 4483 19 ENSG00000276893.1 AL136231.1 chr9 4719746 4719841 - miRNA NOVEL NA 96 96 1 ENSG00000201114.1 Y_RNA chr1 114490724 114490832 + misc_RNA NOVEL NA 109 109 1 ENSG00000270639.1 ECM1P1 chr9 4768617 4769895 - processed_pseudogene KNOWN OTTHUMG00000184620.2 1279 1279 1 ENSG00000220105.2 RP11-307I14.2 chr9 4781475 4782078 - processed_pseudogene KNOWN OTTHUMG00000019471.1 604 604 1 ENSG00000120158.10 RCL1 chr9 4792869 4885917 + protein_coding KNOWN OTTHUMG00000019474.3 93049 4215 45 ENSG00000233186.2 KLF4P1 chr9 4803788 4804972 - processed_pseudogene KNOWN OTTHUMG00000019473.2 1185 1185 1 ENSG00000281007.1 AL158147.2 chr9 4834156 4860275 + protein_coding KNOWN NA 26120 648 5 ENSG00000199065.2 MIR101-2 chr9 4850291 4850381 + miRNA KNOWN NA 91 91 1 ENSG00000228165.1 RP11-125K10.5 chr9 4850299 4850373 - antisense NOVEL OTTHUMG00000019477.1 75 75 1 ENSG00000220937.3 HNRNPA1P41 chr9 4944670 4945902 - processed_pseudogene KNOWN OTTHUMG00000019475.2 1233 928 2 ENSG00000238362.1 AL158147.1 chr9 4968097 4968185 + miRNA NOVEL NA 89 89 1 ENSG00000096968.11 JAK2 chr9 4985033 5128183 + protein_coding KNOWN OTTHUMG00000019490.1 143151 5794 30 ENSG00000236480.1 PKMP1 chr1 114535995 114537840 + processed_pseudogene KNOWN OTTHUMG00000011897.1 1846 1523 2 ENSG00000234534.1 CSNK1G2P1 chr9 5040945 5041940 + processed_pseudogene KNOWN OTTHUMG00000019483.1 996 955 2 ENSG00000182347.10 PDSS1P1 chr9 5084999 5086112 - processed_pseudogene KNOWN OTTHUMG00000019488.1 1114 1114 1 ENSG00000227730.2 MTND6P5 chr9 5091093 5091604 + unprocessed_pseudogene KNOWN OTTHUMG00000019484.2 512 512 1 ENSG00000228166.1 MTND1P11 chr9 5094139 5095014 + unprocessed_pseudogene KNOWN OTTHUMG00000019492.1 876 876 1 ENSG00000224083.1 RP11-39K24.4 chr9 5096666 5098193 + unprocessed_pseudogene KNOWN OTTHUMG00000019485.1 1528 1528 1 ENSG00000235917.1 RP11-39K24.14 chr9 5098341 5099325 + unprocessed_pseudogene KNOWN OTTHUMG00000019480.1 985 680 2 ENSG00000228097.1 RP11-39K24.12 chr9 5099560 5100229 + unprocessed_pseudogene KNOWN OTTHUMG00000019478.1 670 670 1 ENSG00000237711.1 RP11-39K24.13 chr9 5100236 5101009 + unprocessed_pseudogene KNOWN OTTHUMG00000019479.1 774 774 1 ENSG00000236254.1 MTND4P14 chr9 5107937 5109290 + unprocessed_pseudogene KNOWN OTTHUMG00000019486.1 1354 1354 1 ENSG00000230225.1 MTND5P14 chr9 5109496 5110762 + unprocessed_pseudogene KNOWN OTTHUMG00000019481.1 1267 1267 1 ENSG00000116752.5 BCAS2 chr1 114567557 114581639 - protein_coding KNOWN OTTHUMG00000011898.1 14083 1299 13 ENSG00000236567.2 TCF3P1 chr9 5110913 5112849 + processed_pseudogene KNOWN OTTHUMG00000019487.2 1937 1937 1 ENSG00000254017.1 IGHEP2 chr9 5113549 5114804 + IG_C_pseudogene KNOWN OTTHUMG00000019482.2 1256 1256 1 ENSG00000120210.6 INSL6 chr9 5131979 5185668 - protein_coding KNOWN OTTHUMG00000019489.3 53690 1128 6 ENSG00000237553.1 RP11-140C18.2 chr9 5193339 5193558 - processed_pseudogene KNOWN OTTHUMG00000019493.2 220 220 1 ENSG00000120211.4 INSL4 chr9 5231419 5235304 + protein_coding KNOWN OTTHUMG00000019494.2 3886 1952 2 ENSG00000107014.8 RLN2 chr9 5299868 5304969 - protein_coding KNOWN OTTHUMG00000019496.4 5102 1278 5 ENSG00000214195.4 HMGN2P31 chr9 5311444 5311716 + processed_pseudogene KNOWN OTTHUMG00000019497.2 273 273 1 ENSG00000107018.7 RLN1 chr9 5334969 5339873 - protein_coding KNOWN OTTHUMG00000019495.2 4905 1102 4 ENSG00000272866.1 RP11-12D24.10 chr9 5351796 5352410 - lincRNA NOVEL OTTHUMG00000185907.1 615 615 1 ENSG00000231967.1 RP11-12D24.6 chr9 5356312 5356525 - processed_pseudogene KNOWN OTTHUMG00000019498.1 214 214 1 ENSG00000175984.13 DENND2C chr1 114582848 114670422 - protein_coding KNOWN OTTHUMG00000011893.2 87575 7413 83 ENSG00000107020.8 PLGRKT chr9 5357973 5437878 - protein_coding KNOWN OTTHUMG00000019501.2 79906 1493 18 ENSG00000214190.2 RNF152P1 chr9 5418373 5418976 - processed_pseudogene KNOWN OTTHUMG00000019499.2 604 604 1 ENSG00000120217.12 CD274 chr9 5450503 5470566 + protein_coding KNOWN OTTHUMG00000019503.2 20064 4108 24 ENSG00000197646.7 PDCD1LG2 chr9 5510570 5571254 + protein_coding KNOWN OTTHUMG00000019504.2 60685 2365 7 ENSG00000231509.1 RP11-574F11.3 chr9 5584490 5588994 + lincRNA NOVEL OTTHUMG00000019502.2 4505 758 2 ENSG00000107036.10 RIC1 chr9 5629025 5776557 + protein_coding KNOWN OTTHUMG00000019505.4 147533 8591 124 ENSG00000225408.1 RP11-207C16.4 chr9 5719021 5720244 - antisense NOVEL OTTHUMG00000019506.1 1224 543 2 ENSG00000099219.12 ERMP1 chr9 5765076 5833117 - protein_coding KNOWN OTTHUMG00000019508.5 68042 6528 80 ENSG00000223621.1 AK4P4 chr9 5855781 5856426 - processed_pseudogene KNOWN OTTHUMG00000019509.1 646 646 1 ENSG00000183354.10 KIAA2026 chr9 5881596 6007901 - protein_coding KNOWN OTTHUMG00000019507.5 126306 7930 31 ENSG00000116748.18 AMPD1 chr1 114673098 114695618 - protein_coding KNOWN OTTHUMG00000011892.5 22521 2496 34 ENSG00000120215.8 MLANA chr9 5890802 5910606 + protein_coding KNOWN OTTHUMG00000019510.1 19805 3083 22 ENSG00000263575.1 MIR4665 chr9 6007826 6007904 + miRNA KNOWN NA 79 79 1 ENSG00000137040.9 RANBP6 chr9 6011043 6015625 - protein_coding KNOWN OTTHUMG00000019512.3 4583 4583 5 ENSG00000228739.1 RP11-218I7.2 chr9 6047360 6066714 + lincRNA NOVEL OTTHUMG00000019514.1 19355 499 2 ENSG00000237274.2 GTF3AP1 chr9 6195934 6197248 + processed_pseudogene KNOWN OTTHUMG00000019515.2 1315 1004 2 ENSG00000137033.10 IL33 chr9 6215786 6257983 + protein_coding KNOWN OTTHUMG00000019516.1 42198 3253 26 ENSG00000228132.2 RP11-279E1.1 chr9 6276640 6276974 + processed_pseudogene KNOWN OTTHUMG00000019517.2 335 335 1 ENSG00000233846.2 RP11-307L3.2 chr9 6278667 6279153 + processed_pseudogene KNOWN OTTHUMG00000019519.1 487 487 1 ENSG00000170777.10 TPD52L3 chr9 6328375 6331900 + protein_coding KNOWN OTTHUMG00000019518.1 3526 3465 5 ENSG00000147854.15 UHRF2 chr9 6413151 6507054 + protein_coding KNOWN OTTHUMG00000019521.7 93904 9919 82 ENSG00000242769.3 RN7SL432P chr1 114697627 114697924 - misc_RNA KNOWN NA 298 298 1 ENSG00000233367.1 RP11-307L3.4 chr9 6415145 6449558 - antisense NOVEL OTTHUMG00000019520.1 34414 638 2 ENSG00000178445.8 GLDC chr9 6532464 6645650 - protein_coding KNOWN OTTHUMG00000019524.2 113187 4656 39 ENSG00000264530.2 RN7SL25P chr9 6542094 6542353 + misc_RNA KNOWN NA 260 260 1 ENSG00000237158.1 RP11-472F14.4 chr9 6568844 6569360 + processed_pseudogene KNOWN OTTHUMG00000019522.1 517 517 1 ENSG00000206147.5 RP11-106A1.2 chr9 6639139 6639604 + processed_pseudogene KNOWN OTTHUMG00000019525.1 466 466 1 ENSG00000236924.1 RP11-390F4.6 chr9 6645956 6670635 + lincRNA NOVEL OTTHUMG00000019532.1 24680 526 3 ENSG00000266863.2 RN7SL123P chr9 6661651 6661942 + misc_RNA KNOWN NA 292 292 1 ENSG00000229057.1 RPS3AP54 chr9 6662424 6663792 + processed_pseudogene KNOWN OTTHUMG00000019526.1 1369 734 3 ENSG00000231381.2 RNF2P1 chr9 6668999 6670008 - processed_pseudogene KNOWN OTTHUMG00000019528.2 1010 1010 1 ENSG00000232946.1 RP11-390F4.2 chr9 6675284 6675614 + processed_pseudogene KNOWN OTTHUMG00000019529.2 331 331 1 ENSG00000213281.4 NRAS chr1 114704469 114716894 - protein_coding KNOWN OTTHUMG00000012059.2 12426 4449 7 ENSG00000229611.1 RP11-390F4.10 chr9 6704471 6707780 + lincRNA NOVEL OTTHUMG00000019527.1 3310 422 2 ENSG00000225489.5 RP11-390F4.3 chr9 6716495 6727438 + lincRNA NOVEL OTTHUMG00000019530.3 10944 2839 18 ENSG00000274527.3 KDM4C chr9 6720863 7077263 + protein_coding PUTATIVE OTTHUMG00000187508.1 356401 3406 36 ENSG00000231108.2 SLMO2P11 chr9 6734598 6735076 - processed_pseudogene KNOWN OTTHUMG00000019535.2 479 479 1 ENSG00000256968.1 SNRPEP2 chr9 6748703 6748981 - processed_pseudogene KNOWN OTTHUMG00000019531.2 279 279 1 ENSG00000107077.16 KDM4C chr9 6757641 7175648 + protein_coding KNOWN OTTHUMG00000019536.4 418008 10188 130 ENSG00000230581.2 ACTG1P14 chr9 6834456 6835577 + processed_pseudogene KNOWN OTTHUMG00000019534.2 1122 1122 1 ENSG00000224972.1 RP11-403H13.1 chr9 6902670 6978859 + sense_intronic NOVEL OTTHUMG00000150500.1 76190 553 4 ENSG00000230207.1 RPL4P5 chr9 7477045 7478320 - processed_pseudogene KNOWN OTTHUMG00000019537.1 1276 1276 1 ENSG00000178654.11 PPIAP33 chr9 7597823 7598377 + processed_pseudogene KNOWN OTTHUMG00000019538.2 555 555 1 ENSG00000269925.1 RP3-467L1.6 chr1 7776383 7776775 + sense_intronic NOVEL OTTHUMG00000183953.1 393 393 1 ENSG00000009307.14 CSDE1 chr1 114716913 114758676 - protein_coding KNOWN OTTHUMG00000012060.3 41764 5778 189 ENSG00000276273.1 AL591509.1 chr9 7624260 7624354 - miRNA NOVEL NA 95 95 1 ENSG00000273056.1 RP11-77E14.2 chr9 7786105 7786688 - lincRNA NOVEL OTTHUMG00000185908.1 584 584 1 ENSG00000137038.7 TMEM261 chr9 7796490 7888380 - protein_coding KNOWN OTTHUMG00000019539.1 91891 3000 7 ENSG00000226376.1 RP11-29B9.1 chr9 7930827 7935137 - lincRNA NOVEL OTTHUMG00000019540.1 4311 196 3 ENSG00000231902.1 RP11-29B9.2 chr9 7960413 7961080 - lincRNA NOVEL OTTHUMG00000046176.1 668 501 2 ENSG00000153707.14 PTPRD chr9 8314246 10612723 - protein_coding KNOWN OTTHUMG00000021005.3 2298478 11045 323 ENSG00000235389.2 RP11-134K1.3 chr9 8700595 8701552 - sense_intronic NOVEL OTTHUMG00000019542.2 958 486 2 ENSG00000212695.5 RP11-134K1.2 chr9 8713311 8713841 + processed_pseudogene KNOWN OTTHUMG00000019541.1 531 531 1 ENSG00000239102.1 RNU7-185P chr9 8797135 8797194 + snRNA KNOWN NA 60 60 1 ENSG00000225706.1 PTPRD-AS1 chr9 8858130 8862255 + lincRNA NOVEL OTTHUMG00000019543.1 4126 2494 4 ENSG00000201900.1 RNY1P13 chr1 114727720 114727824 + misc_RNA KNOWN NA 105 105 1 ENSG00000280796.1 Clostridiales-1 chr9 8919806 8919947 - sRNA NOVEL NA 142 142 1 ENSG00000234021.1 RP11-75C9.2 chr9 8936079 8963077 + lincRNA NOVEL OTTHUMG00000019544.1 26999 572 4 ENSG00000212829.8 RPS26P3 chr9 9090898 9091245 + processed_pseudogene KNOWN OTTHUMG00000019545.3 348 348 1 ENSG00000221708.2 AL353733.1 chr9 9425461 9425558 - miRNA NOVEL NA 98 98 1 ENSG00000265735.2 RN7SL5P chr9 9442060 9442380 + misc_RNA KNOWN NA 321 321 1 ENSG00000230920.1 RP11-527D15.1 chr9 9799423 9803784 + lincRNA NOVEL OTTHUMG00000019546.1 4362 383 3 ENSG00000234360.1 RP11-87N24.1 chr9 10532145 10532411 + processed_pseudogene KNOWN OTTHUMG00000019548.1 267 267 1 ENSG00000226717.2 PTPRD-AS2 chr9 10613202 10620420 + lincRNA NOVEL OTTHUMG00000019549.2 7219 2838 3 ENSG00000232035.1 RP11-87N24.3 chr9 10631750 10632203 - lincRNA NOVEL OTTHUMG00000019550.1 454 157 2 ENSG00000227138.1 RP11-421B23.2 chr9 10777357 10777525 + processed_pseudogene KNOWN OTTHUMG00000019552.1 169 169 1 ENSG00000052723.10 SIKE1 chr1 114769479 114780685 - protein_coding KNOWN OTTHUMG00000012061.3 11207 5894 33 ENSG00000230589.1 IMP3P1 chr9 10829752 10830308 - processed_pseudogene KNOWN OTTHUMG00000019551.2 557 557 1 ENSG00000270372.1 RP11-109M17.2 chr9 10948372 10948481 - lincRNA NOVEL OTTHUMG00000185124.1 110 110 1 ENSG00000234146.1 AKAP8P1 chr9 11011748 11013096 + processed_pseudogene KNOWN OTTHUMG00000019553.1 1349 1349 1 ENSG00000230365.1 RP11-23D5.1 chr9 11275314 11276314 - lincRNA NOVEL OTTHUMG00000019554.1 1001 285 2 ENSG00000275130.1 RP11-32D4.1 chr9 11618496 11618621 - unprocessed_pseudogene KNOWN OTTHUMG00000187711.1 126 126 1 ENSG00000224935.1 RP11-74C3.1 chr9 12098660 12159147 - lincRNA NOVEL OTTHUMG00000019555.1 60488 561 4 ENSG00000231491.2 JKAMPP1 chr9 12287320 12288238 + processed_pseudogene KNOWN OTTHUMG00000019556.2 919 919 1 ENSG00000222581.1 RNU2-47P chr9 12300266 12300451 - snRNA KNOWN NA 186 186 1 ENSG00000107165.11 TYRP1 chr9 12685439 12710290 + protein_coding KNOWN OTTHUMG00000021034.4 24852 3741 25 ENSG00000235448.1 LURAP1L-AS1 chr9 12700100 12814345 - antisense NOVEL OTTHUMG00000019558.1 114246 799 4 ENSG00000227970.1 NR1H5P chr1 114837227 114851453 + unitary_pseudogene KNOWN OTTHUMG00000012058.1 14227 1377 7 ENSG00000243115.3 RN7SL849P chr9 12764761 12765055 - misc_RNA KNOWN NA 295 295 1 ENSG00000153714.5 LURAP1L chr9 12775021 12822131 + protein_coding KNOWN OTTHUMG00000019557.1 47111 2132 4 ENSG00000222658.1 Y_RNA chr9 12885321 12885417 + misc_RNA NOVEL NA 97 97 1 ENSG00000214121.4 TDPX2 chr9 12972843 12973438 - processed_pseudogene KNOWN OTTHUMG00000019559.2 596 596 1 ENSG00000234586.2 RP11-382H24.2 chr9 13021694 13022892 - processed_pseudogene KNOWN OTTHUMG00000019560.2 1199 1199 1 ENSG00000107186.15 MPDZ chr9 13105704 13279590 - protein_coding KNOWN OTTHUMG00000021031.5 173887 11273 452 ENSG00000234740.1 RP11-272P10.2 chr9 13274510 13279187 - sense_intronic NOVEL OTTHUMG00000019561.1 4678 457 3 ENSG00000223672.2 RP11-272P10.3 chr9 13322806 13323450 - processed_pseudogene KNOWN OTTHUMG00000019562.2 645 645 1 ENSG00000270547.4 LINC01235 chr9 13406380 13433053 - lincRNA NOVEL OTTHUMG00000185076.1 26674 2576 6 ENSG00000226197.2 RP11-536O18.1 chr9 13446491 13487511 + lincRNA NOVEL OTTHUMG00000019563.2 41021 512 2 ENSG00000198765.10 SYCP1 chr1 114854803 114995370 + protein_coding KNOWN OTTHUMG00000012057.1 140568 4338 182 ENSG00000205636.3 LINC00583 chr9 13927971 13945610 + lincRNA NOVEL OTTHUMG00000019564.1 17640 387 3 ENSG00000229268.1 PES1P2 chr9 13986175 13987909 + processed_pseudogene KNOWN OTTHUMG00000019565.1 1735 1735 1 ENSG00000235533.1 RP11-284P20.3 chr9 14025971 14030115 + lincRNA NOVEL OTTHUMG00000019566.1 4145 436 3 ENSG00000223568.1 RPL3P11 chr9 14040716 14041861 - processed_pseudogene KNOWN OTTHUMG00000019567.2 1146 1146 1 ENSG00000213954.3 ATP5HP3 chr9 14068932 14069417 + processed_pseudogene KNOWN OTTHUMG00000019568.2 486 486 1 ENSG00000147862.13 NFIB chr9 14081843 14398983 - protein_coding KNOWN OTTHUMG00000021027.2 317141 10514 92 ENSG00000234982.1 RP11-280O24.3 chr9 14204248 14205039 + processed_pseudogene KNOWN OTTHUMG00000019569.1 792 792 1 ENSG00000225472.1 RP11-120J1.1 chr9 14317085 14357908 + antisense NOVEL OTTHUMG00000019570.1 40824 1054 4 ENSG00000237137.1 RP11-408A13.2 chr9 14531916 14532042 - processed_pseudogene KNOWN OTTHUMG00000019572.1 127 127 1 ENSG00000273399.2 RP11-408A13.3 chr9 14586766 14587326 - lincRNA NOVEL OTTHUMG00000185910.2 561 561 1 ENSG00000134200.3 TSHB chr1 115029824 115034309 + protein_coding KNOWN OTTHUMG00000011881.2 4486 537 5 ENSG00000272871.1 RP11-408A13.4 chr9 14588797 14590065 - lincRNA NOVEL OTTHUMG00000185911.1 1269 1269 1 ENSG00000229029.2 CDCA4P1 chr9 14593577 14594200 + processed_pseudogene KNOWN OTTHUMG00000019571.2 624 624 1 ENSG00000175893.10 ZDHHC21 chr9 14611071 14693471 - protein_coding KNOWN OTTHUMG00000019573.2 82401 9426 15 ENSG00000147869.4 CER1 chr9 14719724 14722717 - protein_coding KNOWN OTTHUMG00000021022.1 2994 1215 2 ENSG00000164946.18 FREM1 chr9 14734666 14910995 - protein_coding KNOWN OTTHUMG00000019575.5 176330 10762 146 ENSG00000199814.1 RNU6-1260P chr9 14850429 14850535 + snRNA KNOWN NA 107 107 1 ENSG00000214110.3 LDHAP4 chr9 14921337 14922334 - processed_pseudogene KNOWN OTTHUMG00000019577.2 998 998 1 ENSG00000232000.2 CLCN3P1 chr9 14987302 15146401 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000019579.2 159100 2803 14 ENSG00000215237.6 RP11-54D18.2 chr9 14993312 15019729 + unprocessed_pseudogene KNOWN OTTHUMG00000019578.2 26418 1188 8 ENSG00000234297.2 RP11-54D18.4 chr9 15055057 15056052 + processed_pseudogene KNOWN OTTHUMG00000019580.2 996 996 1 ENSG00000134198.8 TSPAN2 chr1 115048011 115089500 - protein_coding KNOWN OTTHUMG00000011878.3 41490 3410 26 ENSG00000251960.1 RNU6-559P chr9 15143289 15143386 + snRNA KNOWN NA 98 98 1 ENSG00000155158.19 TTC39B chr9 15163622 15307360 - protein_coding KNOWN OTTHUMG00000019581.7 143739 12208 125 ENSG00000215236.3 RPL7P33 chr9 15361393 15362134 + processed_pseudogene KNOWN OTTHUMG00000019582.1 742 742 1 ENSG00000164975.14 SNAPC3 chr9 15422704 15465953 + protein_coding KNOWN OTTHUMG00000019583.4 43250 6684 55 ENSG00000251834.1 RNU6-319P chr9 15431899 15432006 - snRNA KNOWN NA 108 108 1 ENSG00000164985.13 PSIP1 chr9 15464066 15511019 - protein_coding KNOWN OTTHUMG00000021021.2 46954 6768 85 ENSG00000278754.1 RP11-518K17.4 chr9 15524576 15524707 - processed_pseudogene KNOWN OTTHUMG00000187712.1 132 132 1 ENSG00000240613.3 RN7SL98P chr9 15525782 15526081 - misc_RNA KNOWN NA 300 300 1 ENSG00000213362.3 FTH1P12 chr9 15527133 15527683 - processed_pseudogene KNOWN OTTHUMG00000019586.1 551 551 1 ENSG00000207433.1 RNU6-246P chr9 15544188 15544294 + snRNA KNOWN NA 107 107 1 ENSG00000233730.1 RP4-666F24.3 chr1 115099672 115102658 + lincRNA NOVEL OTTHUMG00000011879.1 2987 491 2 ENSG00000164989.14 CCDC171 chr9 15552897 16061663 + protein_coding KNOWN OTTHUMG00000019584.6 508767 15144 78 ENSG00000231376.1 HMGN2P16 chr9 15588355 15588615 + processed_pseudogene KNOWN OTTHUMG00000019585.2 261 261 1 ENSG00000207360.1 RNU6-14P chr9 15776181 15776286 - snRNA KNOWN NA 106 106 1 ENSG00000205549.7 C9orf92 chr9 16203935 16276313 - protein_coding KNOWN OTTHUMG00000019588.1 72379 454 10 ENSG00000281869.1 Clostridiales-1 chr9 16340098 16340232 + sRNA NOVEL NA 135 135 1 ENSG00000173068.16 BNC2 chr9 16409503 16870843 - protein_coding KNOWN OTTHUMG00000019593.11 461341 15323 70 ENSG00000231756.1 RP11-183I6.2 chr9 16473188 16476237 + antisense NOVEL OTTHUMG00000019589.1 3050 414 2 ENSG00000230694.1 RP11-62F24.1 chr9 16625676 16626390 + antisense NOVEL OTTHUMG00000019590.1 715 455 2 ENSG00000234779.1 RP11-62F24.2 chr9 16726814 16727524 + antisense NOVEL OTTHUMG00000019591.1 711 428 3 ENSG00000233551.2 LSM1P1 chr9 16775573 16775845 - processed_pseudogene KNOWN OTTHUMG00000019592.2 273 273 1 ENSG00000228035.1 RP4-663N10.1 chr1 115283034 115368072 + antisense NOVEL OTTHUMG00000011974.1 85039 2610 2 ENSG00000237153.1 RP11-132E11.2 chr9 17048919 17112815 + lincRNA NOVEL OTTHUMG00000019594.1 63897 666 2 ENSG00000241152.3 RN7SL720P chr9 17053901 17054204 + misc_RNA KNOWN NA 304 304 1 ENSG00000226470.1 RP11-132E11.3 chr9 17096301 17096446 - processed_pseudogene KNOWN OTTHUMG00000019595.1 146 146 1 ENSG00000237083.1 RP11-132E11.4 chr9 17108304 17108604 - processed_pseudogene KNOWN OTTHUMG00000019596.1 301 301 1 ENSG00000044459.13 CNTLN chr9 17134982 17503923 + protein_coding KNOWN OTTHUMG00000019599.5 368942 11064 41 ENSG00000224488.1 SAMM50P1 chr9 17447145 17448543 - processed_pseudogene KNOWN OTTHUMG00000019598.1 1399 1399 1 ENSG00000107295.9 SH3GL2 chr9 17579082 17797129 + protein_coding KNOWN OTTHUMG00000019601.1 218048 2682 11 ENSG00000228810.1 PABPC1P11 chr9 17589161 17591318 - processed_pseudogene KNOWN OTTHUMG00000019600.1 2158 2007 2 ENSG00000227167.1 RP11-570H19.2 chr9 18360597 18362220 - lincRNA NOVEL OTTHUMG00000019602.1 1624 237 2 ENSG00000178031.14 ADAMTSL1 chr9 18473894 18910950 + protein_coding KNOWN OTTHUMG00000019604.9 437057 13172 128 ENSG00000134259.3 NGF chr1 115285918 115338236 - protein_coding KNOWN OTTHUMG00000011880.1 52319 1047 3 ENSG00000264638.1 MIR3152 chr9 18573306 18573379 + miRNA KNOWN NA 74 74 1 ENSG00000252960.1 RN7SKP258 chr9 18651147 18651450 + misc_RNA KNOWN NA 304 304 1 ENSG00000236857.3 RAP1BP1 chr9 18717974 18718526 - processed_pseudogene KNOWN OTTHUMG00000019603.3 553 553 1 ENSG00000155875.12 FAM154A chr9 18927658 19049354 - protein_coding KNOWN OTTHUMG00000019609.3 121697 2365 14 ENSG00000236680.1 RP11-296P7.4 chr9 19026892 19028129 + processed_pseudogene KNOWN OTTHUMG00000019608.1 1238 1238 1 ENSG00000155876.5 RRAGA chr9 19049395 19050983 + protein_coding KNOWN OTTHUMG00000019621.1 1589 1589 1 ENSG00000147874.9 HAUS6 chr9 19053143 19103119 - protein_coding KNOWN OTTHUMG00000019622.2 49977 7932 35 ENSG00000251733.1 SCARNA8 chr9 19063656 19063786 - scaRNA KNOWN NA 131 131 1 ENSG00000252943.1 RNU6-264P chr9 19073843 19073946 + snRNA KNOWN NA 104 104 1 ENSG00000201118.1 Y_RNA chr9 19089593 19089688 + misc_RNA NOVEL NA 96 96 1 ENSG00000236601.1 RP4-669L17.2 chr1 358857 365704 + lincRNA NOVEL OTTHUMG00000002855.2 6848 635 4 ENSG00000049246.13 PER3 chr1 7784320 7845177 + protein_coding KNOWN OTTHUMG00000001216.3 60858 8099 107 ENSG00000226973.1 RP4-663N10.2 chr1 115471941 115476027 + unprocessed_pseudogene KNOWN OTTHUMG00000011975.1 4087 794 5 ENSG00000147872.8 PLIN2 chr9 19108375 19149290 - protein_coding KNOWN OTTHUMG00000019624.1 40916 5086 33 ENSG00000232176.1 RP11-146N23.1 chr9 19200335 19201046 - processed_pseudogene KNOWN OTTHUMG00000019625.1 712 712 1 ENSG00000137145.19 DENND4C chr9 19230435 19373545 + protein_coding KNOWN OTTHUMG00000019627.6 143111 8745 153 ENSG00000232978.2 RP11-146N23.4 chr9 19291337 19292576 - antisense NOVEL OTTHUMG00000019626.2 1240 409 2 ENSG00000272842.1 RP11-513M16.7 chr9 19371386 19371945 - antisense NOVEL OTTHUMG00000185919.1 560 560 1 ENSG00000273226.1 RP11-513M16.8 chr9 19375451 19375996 + antisense NOVEL OTTHUMG00000185921.1 546 546 1 ENSG00000137154.11 RPS6 chr9 19375715 19380254 - protein_coding KNOWN OTTHUMG00000019642.2 4540 2714 21 ENSG00000234853.2 NDUFA5P3 chr9 19383217 19383887 - processed_pseudogene KNOWN OTTHUMG00000019641.2 671 345 2 ENSG00000177076.5 ACER2 chr9 19409059 19452020 + protein_coding KNOWN OTTHUMG00000019644.1 42962 2238 6 ENSG00000260912.1 RP11-363E7.4 chr9 19453209 19455173 + sense_overlapping NOVEL OTTHUMG00000175502.1 1965 1965 1 ENSG00000274468.1 RP4-663N10.3 chr1 115479428 115481572 + unprocessed_pseudogene KNOWN OTTHUMG00000187531.1 2145 298 2 ENSG00000231909.7 MAP1LC3BP1 chr9 19460926 19464524 - transcribed_processed_pseudogene KNOWN OTTHUMG00000019643.3 3599 750 5 ENSG00000155886.10 SLC24A2 chr9 19507452 19786928 - protein_coding KNOWN OTTHUMG00000019646.2 279477 10749 19 ENSG00000232158.1 C11orf98P1 chr9 19705338 19705655 + processed_pseudogene KNOWN OTTHUMG00000019645.1 318 318 1 ENSG00000266224.1 AL158077.1 chr9 19829753 19829847 + miRNA NOVEL NA 95 95 1 ENSG00000276667.1 RP11-471J7.1 chr9 19895800 19895973 - unprocessed_pseudogene KNOWN OTTHUMG00000187715.1 174 174 1 ENSG00000261402.1 RP11-378I6.1 chr9 19926094 19929937 + lincRNA NOVEL OTTHUMG00000175790.1 3844 3844 1 ENSG00000270712.1 RP11-378I6.2 chr9 19957394 19958147 - processed_pseudogene KNOWN OTTHUMG00000184627.1 754 754 1 ENSG00000277711.1 RP11-378I6.3 chr9 19967239 19967994 - processed_pseudogene KNOWN OTTHUMG00000187717.1 756 756 1 ENSG00000281142.1 AL512635.1 chr9 20285852 20285983 - miRNA NOVEL NA 132 132 1 ENSG00000237434.1 RP11-15P13.1 chr9 20331446 20332277 + processed_pseudogene KNOWN OTTHUMG00000019647.2 832 832 1 ENSG00000229101.1 TCEB1P20 chr1 115556826 115557475 + unprocessed_pseudogene KNOWN OTTHUMG00000011972.1 650 345 2 ENSG00000171843.14 MLLT3 chr9 20341665 20622543 - protein_coding KNOWN OTTHUMG00000019650.3 280879 8129 67 ENSG00000263790.1 MIR4473 chr9 20411148 20411238 - miRNA KNOWN NA 91 91 1 ENSG00000222202.1 RNU4-26P chr9 20418321 20418427 + snRNA KNOWN NA 107 107 1 ENSG00000264941.1 MIR4474 chr9 20502265 20502342 - miRNA KNOWN NA 78 78 1 ENSG00000237088.1 RP11-73E6.2 chr9 20532552 20533339 + processed_pseudogene KNOWN OTTHUMG00000019648.1 788 788 1 ENSG00000252324.1 AL163193.1 chr9 20576217 20576301 + miRNA NOVEL NA 85 85 1 ENSG00000188352.11 FOCAD chr9 20658309 20995955 + protein_coding KNOWN OTTHUMG00000066930.3 337647 10036 178 ENSG00000227071.1 FOCAD-AS1 chr9 20683304 20684688 - lincRNA NOVEL OTTHUMG00000019649.1 1385 423 4 ENSG00000207609.2 MIR491 chr9 20716100 20716209 + miRNA KNOWN NA 110 110 1 ENSG00000202189.1 SNORA30 chr9 20786927 20787055 + snoRNA NOVEL NA 129 129 1 ENSG00000232185.1 CNOT7P2 chr1 115564601 115565432 + processed_pseudogene KNOWN OTTHUMG00000011973.1 832 832 1 ENSG00000188921.13 PTPLAD2 chr9 20999515 21031636 - protein_coding KNOWN OTTHUMG00000021016.4 32122 9152 10 ENSG00000230208.1 IFNNP1 chr9 21058771 21059323 - processed_pseudogene KNOWN OTTHUMG00000019655.1 553 553 1 ENSG00000171855.6 IFNB1 chr9 21077105 21077963 - protein_coding KNOWN OTTHUMG00000019652.1 859 859 1 ENSG00000225027.2 IFNWP4 chr9 21106543 21106836 + processed_pseudogene KNOWN OTTHUMG00000019654.2 294 294 1 ENSG00000275980.1 RP11-113D19.9 chr9 21135598 21136350 - processed_pseudogene KNOWN OTTHUMG00000187719.1 753 594 2 ENSG00000177047.6 IFNW1 chr9 21140214 21142145 - protein_coding KNOWN OTTHUMG00000019656.1 1932 1932 1 ENSG00000199635.1 Y_RNA chr9 21160235 21160336 - misc_RNA NOVEL NA 102 102 1 ENSG00000137080.4 IFNA21 chr9 21165637 21166660 - protein_coding KNOWN OTTHUMG00000019653.1 1024 1024 1 ENSG00000232281.2 IFNWP15 chr9 21178589 21179188 - unprocessed_pseudogene KNOWN OTTHUMG00000019657.2 600 600 1 ENSG00000236637.2 IFNA4 chr9 21186694 21187671 - protein_coding KNOWN OTTHUMG00000019660.1 978 978 1 ENSG00000270631.1 RP11-710N8.3 chr1 115577229 115577786 - processed_pseudogene KNOWN OTTHUMG00000184333.1 558 558 1 ENSG00000226597.1 IFNWP9 chr9 21190654 21191244 - unprocessed_pseudogene KNOWN OTTHUMG00000019659.1 591 591 1 ENSG00000214042.1 IFNA7 chr9 21201469 21202205 - protein_coding KNOWN OTTHUMG00000019662.1 737 737 1 ENSG00000186803.3 IFNA10 chr9 21206181 21207143 - protein_coding KNOWN OTTHUMG00000019658.1 963 963 1 ENSG00000234829.3 IFNA17 chr9 21206528 21228222 - protein_coding KNOWN OTTHUMG00000019667.1 21695 1307 4 ENSG00000223684.1 IFNWP18 chr9 21209189 21209779 - unprocessed_pseudogene KNOWN OTTHUMG00000019661.1 591 591 1 ENSG00000147885.4 IFNA16 chr9 21216373 21217311 - protein_coding KNOWN OTTHUMG00000019663.1 939 939 1 ENSG00000232138.1 IFNWP5 chr9 21231266 21231853 - unprocessed_pseudogene KNOWN OTTHUMG00000019666.1 588 588 1 ENSG00000228083.2 IFNA14 chr9 21239002 21239991 - protein_coding KNOWN OTTHUMG00000019665.1 990 990 1 ENSG00000224416.2 IFNA22P chr9 21278050 21278619 - unprocessed_pseudogene KNOWN OTTHUMG00000019668.2 570 570 1 ENSG00000147873.5 IFNA5 chr9 21304326 21305312 - protein_coding KNOWN OTTHUMG00000019664.1 987 987 1 ENSG00000239984.3 RN7SL420P chr1 115606471 115606768 + misc_RNA KNOWN NA 298 298 1 ENSG00000226393.1 IFNA20P chr9 21321300 21321827 + unprocessed_pseudogene KNOWN OTTHUMG00000019670.1 528 528 1 ENSG00000198642.6 KLHL9 chr9 21329671 21335380 - protein_coding KNOWN OTTHUMG00000019669.2 5710 5710 1 ENSG00000120235.4 IFNA6 chr9 21349835 21351378 - protein_coding KNOWN OTTHUMG00000019676.1 1544 1544 2 ENSG00000233816.3 IFNA13 chr9 21367424 21368962 - protein_coding KNOWN OTTHUMG00000019675.2 1539 1539 2 ENSG00000188379.6 IFNA2 chr9 21384254 21385388 - protein_coding KNOWN OTTHUMG00000019674.1 1135 1135 1 ENSG00000261696.1 RP11-354P17.15 chr9 21394888 21396346 - lincRNA NOVEL OTTHUMG00000175506.1 1459 1459 1 ENSG00000231195.1 IFNA11P chr9 21398614 21399139 - unprocessed_pseudogene KNOWN OTTHUMG00000019671.1 526 526 1 ENSG00000235108.1 IFNA12P chr9 21403081 21403651 + unprocessed_pseudogene KNOWN OTTHUMG00000019678.1 571 571 1 ENSG00000120242.3 IFNA8 chr9 21409147 21410185 + protein_coding KNOWN OTTHUMG00000019677.1 1039 1039 1 ENSG00000197919.4 IFNA1 chr9 21409169 21441316 + protein_coding KNOWN OTTHUMG00000019673.1 32148 1153 3 ENSG00000207502.1 SNORA42 chr1 115621872 115622005 - snoRNA NOVEL NA 134 134 1 ENSG00000237691.1 IFNWP2 chr9 21420234 21420813 + unprocessed_pseudogene KNOWN OTTHUMG00000019679.1 580 580 1 ENSG00000238271.2 IFNWP19 chr9 21455484 21456049 + unprocessed_pseudogene KNOWN OTTHUMG00000019680.2 566 566 1 ENSG00000171889.3 MIR31HG chr9 21455642 21559669 - sense_overlapping NOVEL OTTHUMG00000019681.1 104028 745 4 ENSG00000184995.7 IFNE chr9 21480839 21482313 - protein_coding KNOWN OTTHUMG00000019672.2 1475 1475 1 ENSG00000199177.1 MIR31 chr9 21512115 21512185 - miRNA KNOWN NA 71 71 1 ENSG00000264379.1 SNORD39 chr9 21524307 21524382 - snoRNA NOVEL NA 76 76 1 ENSG00000227443.2 RP11-344A7.1 chr9 21638285 21638676 + processed_pseudogene KNOWN OTTHUMG00000019682.2 392 392 1 ENSG00000229835.2 KHSRPP1 chr9 21695176 21696943 + processed_pseudogene KNOWN OTTHUMG00000019683.2 1768 1768 1 ENSG00000244230.3 RN7SL151P chr9 21699314 21699596 + misc_RNA KNOWN NA 283 283 1 ENSG00000099810.17 MTAP chr9 21802543 21937651 + protein_coding KNOWN OTTHUMG00000019690.6 135109 14617 64 ENSG00000173218.13 VANGL1 chr1 115641953 115698224 + protein_coding KNOWN OTTHUMG00000011971.2 56272 9062 37 ENSG00000264545.1 RP11-145E5.5 chr9 21802636 22032986 + protein_coding NOVEL OTTHUMG00000179355.1 230351 935 6 ENSG00000229298.1 TUBB8P1 chr9 21811621 21812347 - processed_pseudogene KNOWN OTTHUMG00000019684.1 727 727 1 ENSG00000265194.1 RP11-70L8.4 chr9 21858910 21861926 - antisense NOVEL OTTHUMG00000179356.1 3017 3017 1 ENSG00000279670.1 RP11-70L8.5 chr9 21892188 21893857 + TEC KNOWN OTTHUMG00000179357.1 1670 1670 1 ENSG00000264801.1 ERVFRD-3 chr9 21929457 21931073 + transcribed_processed_pseudogene KNOWN OTTHUMG00000179358.1 1617 1617 1 ENSG00000224854.3 CDKN2A-AS1 chr9 21966929 21967751 + lincRNA KNOWN OTTHUMG00000019687.1 823 823 1 ENSG00000147889.15 CDKN2A chr9 21967753 21995301 - protein_coding KNOWN OTTHUMG00000019686.7 27549 4329 44 ENSG00000240498.5 CDKN2B-AS1 chr9 21994778 22121097 + antisense KNOWN OTTHUMG00000019689.3 126320 4225 130 ENSG00000266446.1 RP11-149I2.4 chr9 21995482 21996013 + sense_intronic NOVEL OTTHUMG00000179348.1 532 435 2 ENSG00000147883.10 CDKN2B chr9 22002903 22009363 - protein_coding KNOWN OTTHUMG00000019691.2 6461 4058 5 ENSG00000118729.11 CASQ2 chr1 115700007 115768781 - protein_coding KNOWN OTTHUMG00000011970.1 68775 2769 14 ENSG00000215221.2 UBA52P6 chr9 22012155 22012536 + processed_pseudogene KNOWN OTTHUMG00000019688.1 382 382 1 ENSG00000274055.1 CDKN2B-AS_3 chr9 22046758 22046901 + misc_RNA NOVEL NA 144 144 1 ENSG00000277653.1 CDKN2B-AS chr9 22117665 22117814 + misc_RNA NOVEL NA 150 150 1 ENSG00000236921.1 RP11-408N14.1 chr9 22203990 22214672 - lincRNA NOVEL OTTHUMG00000019692.1 10683 443 4 ENSG00000176399.3 DMRTA1 chr9 22446841 22455740 + protein_coding KNOWN OTTHUMG00000019693.2 8900 5569 2 ENSG00000234840.1 LINC01239 chr9 22646200 22824213 + lincRNA NOVEL OTTHUMG00000019696.1 178014 2568 8 ENSG00000236739.3 CLIC4P1 chr9 22747700 22748234 + processed_pseudogene KNOWN OTTHUMG00000019694.2 535 535 1 ENSG00000224549.1 RP11-370B11.3 chr9 22767175 22768316 + lincRNA NOVEL OTTHUMG00000019695.1 1142 447 2 ENSG00000227607.2 SUMO2P2 chr9 23632106 23632360 + processed_pseudogene KNOWN OTTHUMG00000019697.2 255 255 1 ENSG00000233906.1 RP11-315I14.2 chr9 23671788 23672399 - lincRNA NOVEL OTTHUMG00000019699.1 612 237 2 ENSG00000177551.5 NHLH2 chr1 115836377 115843917 - protein_coding KNOWN OTTHUMG00000011969.2 7541 7541 6 ENSG00000226626.2 NOP56P2 chr9 23681894 23682662 + processed_pseudogene KNOWN OTTHUMG00000019701.1 769 769 1 ENSG00000107105.13 ELAVL2 chr9 23690104 23826337 - protein_coding KNOWN OTTHUMG00000019700.3 136234 5140 46 ENSG00000231460.2 RP11-321L2.1 chr9 23829670 23849914 + lincRNA NOVEL OTTHUMG00000019702.2 20245 1430 5 ENSG00000237414.2 RP11-321L2.2 chr9 23894990 23898054 - lincRNA NOVEL OTTHUMG00000019703.2 3065 687 2 ENSG00000277608.1 RP11-321L2.3 chr9 23955760 23956444 + unprocessed_pseudogene KNOWN OTTHUMG00000187734.1 685 685 1 ENSG00000205442.11 IZUMO3 chr9 24542952 24545946 - protein_coding KNOWN OTTHUMG00000019704.4 2995 1287 18 ENSG00000269957.4 RP11-20A20.2 chr9 24545952 24591993 + lincRNA NOVEL OTTHUMG00000183978.2 46042 1055 8 ENSG00000216088.1 AL157830.1 chr9 24872712 24872798 - miRNA NOVEL NA 87 87 1 ENSG00000223088.1 RMRPP5 chr9 24905469 24905735 + ribozyme KNOWN NA 267 267 1 ENSG00000222693.1 RN7SKP120 chr9 25088811 25089151 - misc_RNA KNOWN NA 341 341 1 ENSG00000236266.1 RP3-467L1.4 chr1 7810242 7827342 - antisense NOVEL OTTHUMG00000001211.1 17101 830 3 ENSG00000214204.4 HNRNPA1P43 chr1 115856910 115857819 - processed_pseudogene KNOWN OTTHUMG00000011968.3 910 910 1 ENSG00000198680.4 TUSC1 chr9 25676389 25678440 - protein_coding KNOWN OTTHUMG00000159591.1 2052 2052 1 ENSG00000236306.2 LINC01241 chr9 25780056 25812968 + lincRNA KNOWN OTTHUMG00000019705.2 32913 1453 9 ENSG00000270683.1 FAM71BP1 chr9 25937912 25938434 + processed_pseudogene KNOWN OTTHUMG00000184661.1 523 523 1 ENSG00000276759.2 RP11-80I3.1 chr9 26066675 26118408 + lincRNA NOVEL OTTHUMG00000189251.2 51734 2320 7 ENSG00000277875.1 AL356791.1 chr9 26178394 26178489 + miRNA NOVEL NA 96 96 1 ENSG00000266429.1 AL442639.1 chr9 26614040 26614125 - miRNA NOVEL NA 86 86 1 ENSG00000279256.1 RP11-5P15.1 chr9 26642697 26644595 - TEC KNOWN OTTHUMG00000175495.1 1899 1899 1 ENSG00000254261.1 RP11-18A15.1 chr9 26746953 26786874 + lincRNA NOVEL OTTHUMG00000164347.1 39922 443 4 ENSG00000252580.1 SNORA31 chr9 26796173 26796304 - snoRNA NOVEL NA 132 132 1 ENSG00000253400.1 RP11-337A23.6 chr9 26801733 26805862 + lincRNA NOVEL OTTHUMG00000164348.1 4130 371 2 ENSG00000271143.1 RP11-12L8.2 chr1 115916497 115916699 + processed_pseudogene KNOWN OTTHUMG00000184339.1 203 203 1 ENSG00000120159.10 CAAP1 chr9 26840685 26892804 - protein_coding KNOWN OTTHUMG00000019706.3 52120 3014 28 ENSG00000232466.1 RP11-337A23.5 chr9 26880178 26880549 - processed_pseudogene KNOWN OTTHUMG00000019707.1 372 372 1 ENSG00000240306.2 RN7SL100P chr9 26895678 26895970 + misc_RNA KNOWN NA 293 293 1 ENSG00000137055.13 PLAA chr9 26904083 26947463 - protein_coding KNOWN OTTHUMG00000019708.3 43381 4825 49 ENSG00000096872.14 IFT74 chr9 26947039 27062930 + protein_coding KNOWN OTTHUMG00000021028.2 115892 3755 106 ENSG00000234676.1 IFT74-AS1 chr9 26955780 26956295 - antisense NOVEL OTTHUMG00000019709.1 516 405 2 ENSG00000184434.7 LRRC19 chr9 26993136 27005693 - protein_coding KNOWN OTTHUMG00000019710.2 12558 3609 8 ENSG00000254396.1 RP11-56F10.3 chr9 27102630 27104728 + lincRNA NOVEL OTTHUMG00000164634.1 2099 564 2 ENSG00000120156.19 TEK chr9 27109141 27230175 + protein_coding KNOWN OTTHUMG00000019712.4 121035 4805 99 ENSG00000223162.1 RNA5SP280 chr9 27198287 27198401 + rRNA KNOWN NA 115 115 1 ENSG00000228127.1 RP11-12L8.1 chr1 115919376 115925908 + lincRNA NOVEL OTTHUMG00000012009.1 6533 1396 3 ENSG00000232867.1 RP11-179D22.1 chr9 27210327 27210626 + processed_pseudogene KNOWN OTTHUMG00000157147.1 300 300 1 ENSG00000231459.1 LINC00032 chr9 27245684 27282793 - lincRNA KNOWN OTTHUMG00000019711.1 37110 2913 17 ENSG00000120160.9 EQTN chr9 27284659 27297139 - protein_coding KNOWN OTTHUMG00000021033.3 12481 1396 22 ENSG00000120162.9 MOB3B chr9 27325209 27529781 - protein_coding KNOWN OTTHUMG00000019717.3 204573 7087 6 ENSG00000237734.1 RP11-298E2.2 chr9 27391734 27397563 + antisense NOVEL OTTHUMG00000019713.1 5830 708 4 ENSG00000147896.3 IFNK chr9 27524314 27526498 + protein_coding KNOWN OTTHUMG00000019715.1 2185 1140 2 ENSG00000147894.13 C9orf72 chr9 27546545 27573866 - protein_coding KNOWN OTTHUMG00000019716.1 27322 6062 47 ENSG00000215441.3 CTAGE12P chr9 27608382 27610745 - processed_pseudogene KNOWN OTTHUMG00000019718.2 2364 2364 1 ENSG00000260390.1 RP11-575I8.1 chr9 27829276 27844481 + lincRNA NOVEL OTTHUMG00000175783.1 15206 2084 2 ENSG00000260412.1 RP11-438B23.2 chr9 27937617 27944497 - sense_overlapping NOVEL OTTHUMG00000175585.1 6881 6881 1 ENSG00000163393.11 SLC22A15 chr1 115976498 116070054 + protein_coding KNOWN OTTHUMG00000012008.3 93557 5292 21 ENSG00000174482.9 LINGO2 chr9 27948078 28670286 - protein_coding KNOWN OTTHUMG00000019721.2 722209 3480 19 ENSG00000229060.4 RP11-20P5.2 chr9 28148211 28149236 + processed_pseudogene KNOWN OTTHUMG00000019719.2 1026 1026 1 ENSG00000224955.1 KCTD10P1 chr9 28598668 28599292 - processed_pseudogene KNOWN OTTHUMG00000019720.1 625 625 1 ENSG00000215966.1 MIR876 chr9 28863626 28863706 - miRNA KNOWN NA 81 81 1 ENSG00000215939.2 MIR873 chr9 28888856 28888965 - miRNA KNOWN NA 110 110 1 ENSG00000230276.2 RP11-373A6.1 chr9 29254075 29254426 - processed_pseudogene KNOWN OTTHUMG00000019722.2 352 352 1 ENSG00000277646.1 RP11-275A14.1 chr9 29317833 29318952 + processed_pseudogene KNOWN OTTHUMG00000187736.1 1120 1120 1 ENSG00000229834.1 RP11-48L13.1 chr9 29636486 29636853 + processed_pseudogene KNOWN OTTHUMG00000019723.1 368 368 1 ENSG00000230097.2 ME2P1 chr9 29824742 29826711 - processed_pseudogene KNOWN OTTHUMG00000019724.2 1970 1970 1 ENSG00000280683.1 LINC01242 chr9 30388935 30575012 - lincRNA KNOWN OTTHUMG00000189587.2 186078 1966 4 ENSG00000237993.1 RP11-159M11.2 chr1 116013813 116017705 - antisense NOVEL OTTHUMG00000012108.1 3893 705 3 ENSG00000232060.3 SLC4A1APP1 chr9 30558880 30559481 - processed_pseudogene KNOWN OTTHUMG00000019728.2 602 602 1 ENSG00000239792.2 C2orf27AP2 chr9 30670964 30671966 - unprocessed_pseudogene KNOWN OTTHUMG00000019725.2 1003 555 4 ENSG00000215210.3 RBMXP2 chr9 30689105 30690272 + processed_pseudogene KNOWN OTTHUMG00000019727.1 1168 1168 1 ENSG00000221111.1 AL590726.2 chr9 30771097 30771199 - miRNA NOVEL NA 103 103 1 ENSG00000235626.2 KRT18P66 chr9 30773464 30774732 + processed_pseudogene KNOWN OTTHUMG00000019729.1 1269 1269 1 ENSG00000211510.2 AL590726.1 chr9 30774228 30774319 + miRNA NOVEL NA 92 92 1 ENSG00000226246.1 KRT18P36 chr9 30799471 30800746 - processed_pseudogene KNOWN OTTHUMG00000019730.1 1276 1276 1 ENSG00000233278.1 RPS26P2 chr9 30831878 30832225 - processed_pseudogene KNOWN OTTHUMG00000019731.3 348 348 1 ENSG00000214020.3 FTLP4 chr9 30935485 30935977 + processed_pseudogene KNOWN OTTHUMG00000019732.1 493 493 1 ENSG00000228557.1 HSPA8P17 chr9 30988085 30990572 + processed_pseudogene KNOWN OTTHUMG00000019733.1 2488 1382 2 ENSG00000173212.4 MAB21L3 chr1 116111755 116135240 + protein_coding KNOWN OTTHUMG00000012110.3 23486 3256 11 ENSG00000223421.1 RP11-572H4.1 chr9 31165618 31166980 - processed_pseudogene KNOWN OTTHUMG00000019734.1 1363 1363 1 ENSG00000232203.3 SLC25A6P2 chr9 31253901 31254777 + processed_pseudogene KNOWN OTTHUMG00000019735.1 877 877 1 ENSG00000274793.1 AL353783.1 chr9 31326759 31326826 - miRNA NOVEL NA 68 68 1 ENSG00000260720.1 LINC01243 chr9 31371611 31381490 - lincRNA NOVEL OTTHUMG00000175494.1 9880 721 2 ENSG00000226998.1 RP11-291J9.1 chr9 31505280 31505943 + unprocessed_pseudogene KNOWN OTTHUMG00000019736.1 664 664 1 ENSG00000229080.1 RP11-291J9.2 chr9 31505946 31506615 + unprocessed_pseudogene KNOWN OTTHUMG00000019737.1 670 670 1 ENSG00000235148.2 HMGB3P23 chr9 31644576 31645160 - processed_pseudogene KNOWN OTTHUMG00000019738.2 585 585 1 ENSG00000252313.1 RNA5SP281 chr9 32293558 32293692 + rRNA KNOWN NA 135 135 1 ENSG00000225347.1 SLC25A5P8 chr9 32333457 32334354 - processed_pseudogene KNOWN OTTHUMG00000019739.1 898 898 1 ENSG00000122729.17 ACO1 chr9 32384603 32454769 + protein_coding KNOWN OTTHUMG00000019740.3 70167 7555 65 ENSG00000235933.1 RP5-1185H19.2 chr1 116164284 116166241 + lincRNA NOVEL OTTHUMG00000012112.1 1958 914 2 ENSG00000107201.8 DDX58 chr9 32455705 32526324 - protein_coding KNOWN OTTHUMG00000019746.2 70620 4353 35 ENSG00000197579.6 TOPORS chr9 32540544 32552553 - protein_coding KNOWN OTTHUMG00000019743.1 12010 4098 5 ENSG00000235453.6 TOPORS-AS1 chr9 32551144 32567005 + antisense KNOWN OTTHUMG00000019742.3 15862 1885 11 ENSG00000165264.9 NDUFB6 chr9 32552999 32573184 - protein_coding KNOWN OTTHUMG00000019741.1 20186 1388 10 ENSG00000232303.2 DFFBP1 chr9 32566148 32567126 - processed_pseudogene KNOWN OTTHUMG00000019745.2 979 979 1 ENSG00000241043.1 GVQW1 chr9 32566789 32568621 + protein_coding KNOWN OTTHUMG00000019744.1 1833 1833 1 ENSG00000122728.6 TAF1L chr9 32629454 32635669 - protein_coding KNOWN OTTHUMG00000019747.2 6216 6216 1 ENSG00000223440.1 RP11-555J4.4 chr9 32633454 32648685 + antisense NOVEL OTTHUMG00000019750.1 15232 2582 2 ENSG00000230516.1 RP11-555J4.3 chr9 32643103 32645026 - lincRNA NOVEL OTTHUMG00000019749.1 1924 839 2 ENSG00000238001.2 SNRPCP1 chr9 32676063 32676520 - processed_pseudogene KNOWN OTTHUMG00000019748.2 458 458 1 ENSG00000221040.2 U3 chr1 116278606 116278821 + snoRNA NOVEL NA 216 216 1 ENSG00000230867.1 RP11-462B18.1 chr9 32727069 32727522 - processed_pseudogene KNOWN OTTHUMG00000019751.1 454 454 1 ENSG00000221696.1 AL157884.1 chr9 32764296 32764422 + miRNA NOVEL NA 127 127 1 ENSG00000188133.5 TMEM215 chr9 32783499 32787399 + protein_coding KNOWN OTTHUMG00000129521.1 3901 3581 2 ENSG00000272113.2 Y_RNA chr9 32820261 32820350 + misc_RNA NOVEL NA 90 90 1 ENSG00000236796.1 RP11-462B18.3 chr9 32836575 32869595 - unprocessed_pseudogene KNOWN OTTHUMG00000019753.1 33021 1184 12 ENSG00000231193.1 RP11-462B18.2 chr9 32840598 32841762 - lincRNA NOVEL OTTHUMG00000019752.1 1165 551 2 ENSG00000223807.1 BOLA3P4 chr9 32926051 32926450 + processed_pseudogene KNOWN OTTHUMG00000019755.1 400 400 1 ENSG00000237437.1 ASS1P12 chr9 32945996 32947222 + processed_pseudogene KNOWN OTTHUMG00000019754.1 1227 1227 1 ENSG00000137074.17 APTX chr9 32972606 33025168 - protein_coding KNOWN OTTHUMG00000019759.5 52563 3789 201 ENSG00000236184.1 TCEA1P4 chr9 32979560 32980403 - processed_pseudogene KNOWN OTTHUMG00000019756.1 844 844 1 ENSG00000163399.14 ATP1A1 chr1 116372668 116410261 + protein_coding KNOWN OTTHUMG00000012109.8 37594 7261 97 ENSG00000225693.1 LAGE3P1 chr9 33019682 33020165 - processed_pseudogene KNOWN OTTHUMG00000019761.1 484 484 1 ENSG00000086061.14 DNAJA1 chr9 33025211 33039907 + protein_coding KNOWN OTTHUMG00000019760.1 14697 2730 18 ENSG00000122692.8 SMU1 chr9 33041764 33076659 - protein_coding KNOWN OTTHUMG00000019757.1 34896 7122 12 ENSG00000222169.1 AL162590.1 chr9 33042109 33042216 - miRNA NOVEL NA 108 108 1 ENSG00000086062.11 B4GALT1 chr9 33104082 33167356 - protein_coding KNOWN OTTHUMG00000019764.1 63275 4901 9 ENSG00000233554.4 B4GALT1-AS1 chr9 33166975 33179983 + antisense NOVEL OTTHUMG00000019763.1 13009 843 7 ENSG00000252224.1 RNU4ATAC15P chr9 33174170 33174295 + snRNA KNOWN NA 126 126 1 ENSG00000122711.7 SPINK4 chr9 33218365 33248567 + protein_coding KNOWN OTTHUMG00000019762.1 30203 654 9 ENSG00000107262.15 BAG1 chr9 33247820 33264763 - protein_coding KNOWN OTTHUMG00000019766.3 16944 7110 45 ENSG00000086065.12 CHMP5 chr9 33264879 33282069 + protein_coding KNOWN OTTHUMG00000019765.3 17191 2390 17 ENSG00000203865.8 ATP1A1-AS1 chr1 116392247 116418622 - processed_transcript KNOWN OTTHUMG00000012111.4 26376 2458 12 ENSG00000086102.17 NFX1 chr9 33290511 33371157 + protein_coding KNOWN OTTHUMG00000019772.4 80647 7147 71 ENSG00000200544.1 Y_RNA chr9 33352788 33352874 - misc_RNA NOVEL NA 87 87 1 ENSG00000165269.11 AQP7 chr9 33383179 33402682 - protein_coding KNOWN OTTHUMG00000019773.4 19504 5253 97 ENSG00000223678.1 RP11-311H10.4 chr9 33402857 33409948 + antisense NOVEL OTTHUMG00000000392.1 7092 353 3 ENSG00000165272.13 AQP3 chr9 33441154 33447611 - protein_coding KNOWN OTTHUMG00000019769.2 6458 2928 20 ENSG00000270542.1 RP11-311H10.7 chr9 33449755 33449941 + processed_pseudogene KNOWN OTTHUMG00000184681.2 187 187 1 ENSG00000165271.15 NOL6 chr9 33461441 33473930 - protein_coding KNOWN OTTHUMG00000000394.4 12490 5906 83 ENSG00000275651.1 MIR6851 chr9 33467869 33467935 - miRNA KNOWN NA 67 67 1 ENSG00000226823.1 SUGT1P chr9 33503655 33510711 - unprocessed_pseudogene KNOWN OTTHUMG00000019782.2 7057 476 5 ENSG00000228072.1 RP11-255A11.2 chr9 33512959 33514773 - antisense NOVEL OTTHUMG00000000399.1 1815 395 3 ENSG00000049247.12 UTS2 chr1 7843083 7853512 - protein_coding KNOWN OTTHUMG00000001218.2 10430 1791 16 ENSG00000212385.1 RNU6-817P chr1 116413766 116413869 - snRNA KNOWN NA 104 104 1 ENSG00000230453.8 ANKRD18B chr9 33524394 33573009 + protein_coding KNOWN OTTHUMG00000019776.6 48616 5857 44 ENSG00000225123.2 RP11-255A11.4 chr9 33574361 33574588 - processed_pseudogene KNOWN OTTHUMG00000000403.2 228 228 1 ENSG00000234373.1 SNX18P7 chr9 33576380 33577014 + processed_pseudogene KNOWN OTTHUMG00000000409.1 635 635 1 ENSG00000226562.3 CYP4F26P chr9 33580695 33605293 + lincRNA NOVEL OTTHUMG00000000405.3 24599 1137 10 ENSG00000204982.3 PRSS3P4 chr9 33613848 33614009 - unprocessed_pseudogene KNOWN OTTHUMG00000000408.1 162 162 1 ENSG00000205274.3 TRBV20OR9-2 chr9 33617762 33618506 + TR_V_gene KNOWN OTTHUMG00000019781.2 745 416 2 ENSG00000231991.4 ANXA2P2 chr9 33624274 33625293 + processed_pseudogene KNOWN OTTHUMG00000019778.4 1020 1020 1 ENSG00000183938.5 TRBV21OR9-2 chr9 33629121 33629586 + TR_V_gene KNOWN OTTHUMG00000019783.2 466 367 2 ENSG00000234122.1 TRBV22OR9-2 chr9 33634111 33634246 + TR_V_pseudogene KNOWN OTTHUMG00000000400.2 136 136 1 ENSG00000229063.2 TRBV23OR9-2 chr9 33638035 33638494 + TR_V_gene KNOWN OTTHUMG00000019774.2 460 335 2 ENSG00000233154.4 RP4-655J12.4 chr1 116423724 116478842 - lincRNA NOVEL OTTHUMG00000014035.5 55119 1701 20 ENSG00000215206.5 TRBV24OR9-2 chr9 33649047 33649614 + TR_V_pseudogene KNOWN OTTHUMG00000152869.1 568 435 2 ENSG00000240215.4 TRBV25OR9-2 chr9 33662166 33662663 + unprocessed_pseudogene KNOWN OTTHUMG00000019791.3 498 374 2 ENSG00000237984.3 PTENP1 chr9 33673504 33677499 - transcribed_processed_pseudogene KNOWN OTTHUMG00000000410.2 3996 3996 2 ENSG00000281128.1 PTENP1-AS chr9 33677268 33688011 + antisense KNOWN OTTHUMG00000189560.1 10744 873 4 ENSG00000231165.3 TRBV26OR9-2 chr9 33695767 33696059 + TR_V_pseudogene KNOWN OTTHUMG00000000411.2 293 293 1 ENSG00000260947.1 RP11-384P7.7 chr9 33697459 33700986 + lincRNA NOVEL OTTHUMG00000175677.1 3528 3528 1 ENSG00000227301.1 RP11-384P7.5 chr9 33719690 33722555 + lincRNA NOVEL OTTHUMG00000000412.1 2866 1144 2 ENSG00000233776.4 LINC01251 chr9 33732975 33738416 - antisense NOVEL OTTHUMG00000000413.1 5442 486 4 ENSG00000010438.15 PRSS3 chr9 33750466 33799231 + protein_coding KNOWN OTTHUMG00000019798.4 48766 1664 34 ENSG00000235481.2 UBE2R2-AS1 chr9 33785950 33818795 - antisense NOVEL OTTHUMG00000000421.2 32846 647 4 ENSG00000230381.2 RP4-655J12.5 chr1 116429049 116433368 - lincRNA NOVEL OTTHUMG00000014036.4 4320 515 2 ENSG00000223394.2 TRBV29OR9-2 chr9 33786221 33786828 + TR_V_pseudogene KNOWN OTTHUMG00000000415.2 608 333 2 ENSG00000107341.4 UBE2R2 chr9 33817567 33920404 + protein_coding KNOWN OTTHUMG00000019797.1 102838 4075 5 ENSG00000200834.1 Y_RNA chr9 33830978 33831078 + misc_RNA NOVEL NA 101 101 1 ENSG00000251748.1 RNU4ATAC11P chr9 33868540 33868665 + snRNA KNOWN NA 126 126 1 ENSG00000137073.19 UBAP2 chr9 33921693 34048949 - protein_coding KNOWN OTTHUMG00000000427.11 127257 10622 174 ENSG00000238300.1 SNORD121B chr9 33934296 33934376 - snoRNA KNOWN NA 81 81 1 ENSG00000238886.1 SNORD121A chr9 33952769 33952850 - snoRNA KNOWN NA 82 82 1 ENSG00000226801.2 OSTCP8 chr9 33968071 33968518 - processed_pseudogene KNOWN OTTHUMG00000000416.2 448 448 1 ENSG00000222259.1 RN7SKP114 chr9 34049966 34050244 + misc_RNA KNOWN NA 279 279 1 ENSG00000228352.2 RP11-537H15.3 chr9 34084332 34096225 + antisense NOVEL OTTHUMG00000000424.1 11894 635 3 ENSG00000200547.1 Y_RNA chr1 116452536 116452627 + misc_RNA NOVEL NA 92 92 1 ENSG00000198876.11 DCAF12 chr9 34086387 34127399 - protein_coding KNOWN OTTHUMG00000019806.2 41013 4390 24 ENSG00000224802.2 TUBB4BP2 chr9 34109171 34109968 - processed_pseudogene KNOWN OTTHUMG00000000426.2 798 798 1 ENSG00000239392.2 RP11-537H15.4 chr9 34133157 34134696 - processed_pseudogene KNOWN OTTHUMG00000000425.2 1540 1540 1 ENSG00000279975.1 AL353662.3 chr9 34169689 34169936 + pseudogene NOVEL NA 248 246 2 ENSG00000165006.12 UBAP1 chr9 34179005 34252523 + protein_coding KNOWN OTTHUMG00000000430.3 73519 2772 32 ENSG00000227383.1 RP11-571F15.2 chr9 34191555 34191881 + processed_pseudogene KNOWN OTTHUMG00000019811.2 327 327 1 ENSG00000279336.1 AL353662.2 chr9 34201273 34201515 - pseudogene NOVEL NA 243 237 3 ENSG00000252164.1 RNA5SP282 chr9 34206134 34206241 - rRNA KNOWN NA 108 108 1 ENSG00000233668.1 RP11-571F15.3 chr9 34223984 34224628 - processed_pseudogene KNOWN OTTHUMG00000019812.1 645 645 1 ENSG00000186638.14 KIF24 chr9 34252381 34329200 - protein_coding KNOWN OTTHUMG00000019810.6 76820 6226 34 ENSG00000224950.2 RP5-1086K13.1 chr1 116493016 116499212 - lincRNA NOVEL OTTHUMG00000019417.3 6197 2302 2 ENSG00000222426.1 RNU2-50P chr9 34282528 34282670 - snRNA KNOWN NA 143 143 1 ENSG00000266881.1 AL353662.1 chr9 34296379 34296430 + miRNA NOVEL NA 52 52 1 ENSG00000229207.1 SERPINH1P1 chr9 34318407 34319655 + processed_pseudogene KNOWN OTTHUMG00000000429.2 1249 1249 1 ENSG00000164978.16 NUDT2 chr9 34329506 34343713 + protein_coding KNOWN OTTHUMG00000019817.3 14208 1075 17 ENSG00000164976.8 KIAA1161 chr9 34366670 34376853 - protein_coding KNOWN OTTHUMG00000019816.4 10184 6398 4 ENSG00000164972.11 C9orf24 chr9 34379019 34397832 - protein_coding KNOWN OTTHUMG00000000437.3 18814 1439 29 ENSG00000207032.1 Y_RNA chr9 34389943 34390051 - misc_RNA NOVEL NA 109 109 1 ENSG00000164970.13 FAM219A chr9 34398184 34458570 - protein_coding KNOWN OTTHUMG00000019822.2 60387 3782 53 ENSG00000122735.14 DNAI1 chr9 34457414 34520989 + protein_coding KNOWN OTTHUMG00000019825.8 63576 3615 78 ENSG00000251697.1 RN7SKP24 chr9 34478622 34478905 + misc_RNA KNOWN NA 284 284 1 ENSG00000116815.14 CD58 chr1 116514535 116571039 - protein_coding KNOWN OTTHUMG00000022749.4 56505 1783 24 ENSG00000168913.6 ENHO chr9 34521040 34523041 - protein_coding KNOWN OTTHUMG00000159589.1 2002 1082 2 ENSG00000230729.1 RP11-296L22.8 chr9 34521527 34524241 + antisense NOVEL OTTHUMG00000000438.1 2715 631 3 ENSG00000232983.2 RP11-296L22.7 chr9 34546524 34546996 - processed_pseudogene KNOWN OTTHUMG00000000444.2 473 473 1 ENSG00000122756.13 CNTFR chr9 34551432 34590140 - protein_coding KNOWN OTTHUMG00000019821.5 38709 2111 36 ENSG00000237159.4 CNTFR-AS1 chr9 34568015 34582829 + antisense NOVEL OTTHUMG00000000441.1 14815 1182 12 ENSG00000164967.8 RPP25L chr9 34610486 34612104 - protein_coding KNOWN OTTHUMG00000000443.1 1619 1092 4 ENSG00000137100.14 DCTN3 chr9 34613545 34620523 - protein_coding KNOWN OTTHUMG00000019830.5 6979 3740 50 ENSG00000205143.2 ARID3C chr9 34621379 34628107 - protein_coding KNOWN OTTHUMG00000000445.2 6729 1411 7 ENSG00000147955.15 SIGMAR1 chr9 34634722 34637809 - protein_coding KNOWN OTTHUMG00000019829.4 3088 2196 21 ENSG00000213930.10 GALT chr9 34638133 34651035 + protein_coding KNOWN OTTHUMG00000019836.7 12903 4407 162 ENSG00000177173.5 NAP1L4P1 chr1 116532936 116534092 - processed_pseudogene KNOWN OTTHUMG00000022753.1 1157 1157 1 ENSG00000258728.1 RP11-195F19.29 chr9 34646645 34657113 + protein_coding PUTATIVE OTTHUMG00000170834.2 10469 902 8 ENSG00000137070.16 IL11RA chr9 34650702 34661892 + protein_coding KNOWN OTTHUMG00000019837.6 11191 4271 116 ENSG00000213927.3 CCL27 chr9 34661880 34664048 - protein_coding KNOWN OTTHUMG00000019834.2 2169 1008 6 ENSG00000261215.1 RP11-195F19.30 chr9 34661903 34666029 - processed_transcript NOVEL OTTHUMG00000170835.1 4127 3264 5 ENSG00000187186.13 RP11-195F19.5 chr9 34664163 34666112 - protein_coding NOVEL OTTHUMG00000000449.3 1950 1833 15 ENSG00000230074.1 RP11-195F19.9 chr9 34665665 34681298 + antisense NOVEL OTTHUMG00000000451.1 15634 665 3 ENSG00000172724.10 CCL19 chr9 34689567 34691277 - protein_coding KNOWN OTTHUMG00000019833.1 1711 777 9 ENSG00000137077.6 CCL21 chr9 34709005 34710124 - protein_coding KNOWN OTTHUMG00000019838.1 1120 924 7 ENSG00000205108.5 FAM205A chr9 34723055 34729467 - protein_coding KNOWN OTTHUMG00000000448.2 6413 4225 4 ENSG00000257198.5 FAM205BP chr9 34832295 34838586 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000019839.5 6292 4314 10 ENSG00000264419.1 MIR548AC chr1 116560024 116560111 - miRNA KNOWN NA 88 88 1 ENSG00000187791.10 FAM205CP chr9 34889064 34895778 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000019841.3 6715 4396 14 ENSG00000178723.7 GLULP4 chr9 34917175 34918296 + processed_pseudogene KNOWN OTTHUMG00000019842.2 1122 1122 1 ENSG00000215199.3 YWHAZP6 chr9 34922184 34922921 - processed_pseudogene KNOWN OTTHUMG00000019843.2 738 738 1 ENSG00000122733.12 KIAA1045 chr9 34957608 34982544 + protein_coding KNOWN OTTHUMG00000019844.5 24937 5813 20 ENSG00000281491.1 DNAJB5-AS1 chr9 34985410 34989379 - lincRNA KNOWN OTTHUMG00000189564.1 3970 749 2 ENSG00000137094.13 DNAJB5 chr9 34989641 34998900 + protein_coding KNOWN OTTHUMG00000019840.6 9260 5891 37 ENSG00000273597.1 RP11-392A14.9 chr9 35001342 35002994 - processed_pseudogene KNOWN OTTHUMG00000187737.1 1653 1653 1 ENSG00000279489.1 RP11-392A14.8 chr9 35001913 35003663 + TEC KNOWN OTTHUMG00000175586.1 1751 1751 1 ENSG00000233148.2 SYF2P2 chr9 35010703 35011285 + processed_pseudogene KNOWN OTTHUMG00000019845.2 583 583 1 ENSG00000279608.1 RP11-182N22.9 chr9 35038625 35044326 - TEC KNOWN OTTHUMG00000187201.1 5702 5702 1 ENSG00000143061.16 IGSF3 chr1 116574399 116667755 - protein_coding KNOWN OTTHUMG00000022751.2 93357 7400 36 ENSG00000174038.11 C9orf131 chr9 35041095 35045991 + protein_coding KNOWN OTTHUMG00000019853.5 4897 3835 16 ENSG00000241568.3 RN7SL338P chr9 35049271 35049563 + misc_RNA KNOWN NA 293 293 1 ENSG00000165280.14 VCP chr9 35056064 35073249 - protein_coding KNOWN OTTHUMG00000019855.3 17186 5438 52 ENSG00000221829.8 FANCG chr9 35073835 35080016 - protein_coding KNOWN OTTHUMG00000019850.3 6182 3614 44 ENSG00000165282.12 PIGO chr9 35088688 35096601 - protein_coding KNOWN OTTHUMG00000019854.3 7914 7209 54 ENSG00000234181.1 RP11-182N22.8 chr9 35096378 35098141 + antisense NOVEL OTTHUMG00000019849.1 1764 425 2 ENSG00000165283.14 STOML2 chr9 35099776 35103195 - protein_coding KNOWN OTTHUMG00000019851.3 3420 1806 35 ENSG00000005238.18 FAM214B chr9 35104112 35116341 - protein_coding KNOWN OTTHUMG00000019847.6 12230 6409 67 ENSG00000215198.3 RP11-182N22.7 chr9 35147410 35149184 - processed_pseudogene KNOWN OTTHUMG00000019848.1 1775 1775 1 ENSG00000198722.11 UNC13B chr9 35161992 35405338 + protein_coding KNOWN OTTHUMG00000019856.2 243347 6637 215 ENSG00000238532.1 AL355794.1 chr1 116592106 116592199 - miRNA NOVEL NA 94 94 1 ENSG00000279083.1 RP11-395N21.2 chr9 35360540 35362054 - TEC KNOWN OTTHUMG00000187202.1 1515 1515 1 ENSG00000179766.16 ATP8B5P chr9 35406755 35483035 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000019862.5 76281 6167 56 ENSG00000244213.1 ZFAND6P1 chr9 35449748 35450352 + processed_pseudogene KNOWN OTTHUMG00000019859.1 605 605 1 ENSG00000198853.10 RUSC2 chr9 35490127 35561898 + protein_coding KNOWN OTTHUMG00000019861.1 71772 5682 26 ENSG00000235619.1 RPL36AP33 chr9 35507564 35507873 + processed_pseudogene KNOWN OTTHUMG00000019860.1 310 310 1 ENSG00000215187.8 FAM166B chr9 35561831 35563899 - protein_coding KNOWN OTTHUMG00000019858.3 2069 1372 31 ENSG00000227852.1 RP11-156G14.6 chr9 35592786 35592951 + processed_pseudogene KNOWN OTTHUMG00000019864.1 166 166 1 ENSG00000107140.14 TESK1 chr9 35605305 35610041 + protein_coding KNOWN OTTHUMG00000019863.1 4737 3298 40 ENSG00000263892.2 AL357874.1 chr9 35608077 35608188 + miRNA NOVEL NA 112 112 1 ENSG00000137101.11 CD72 chr9 35609533 35646810 - protein_coding KNOWN OTTHUMG00000019870.1 37278 3386 65 ENSG00000049249.7 TNFRSF9 chr1 7915894 7943165 - protein_coding KNOWN OTTHUMG00000001223.3 27272 6331 25 ENSG00000211543.2 MIR320B1 chr1 116671749 116671827 + miRNA KNOWN NA 79 79 1 ENSG00000231393.1 RP11-331F9.3 chr9 35642514 35643517 + antisense NOVEL OTTHUMG00000019865.1 1004 679 2 ENSG00000227933.1 RP11-331F9.4 chr9 35646270 35647099 + antisense NOVEL OTTHUMG00000019866.1 830 574 2 ENSG00000137078.7 SIT1 chr9 35649295 35650950 - protein_coding KNOWN OTTHUMG00000019867.1 1656 1327 17 ENSG00000269900.3 RMRP chr9 35657751 35658018 - lincRNA NOVEL OTTHUMG00000184014.1 268 268 1 ENSG00000277027.1 RNase_MRP chr9 35657754 35658017 - ribozyme NOVEL NA 264 264 1 ENSG00000159884.10 CCDC107 chr9 35658290 35661511 + protein_coding KNOWN OTTHUMG00000019868.1 3222 1459 29 ENSG00000137135.16 ARHGEF39 chr9 35658875 35675866 - protein_coding KNOWN OTTHUMG00000019869.5 16992 6496 43 ENSG00000243136.3 RN7SL22P chr9 35671776 35672044 + misc_RNA KNOWN NA 269 269 1 ENSG00000107159.11 CA9 chr9 35673856 35681159 + protein_coding KNOWN OTTHUMG00000021029.1 7304 1670 29 ENSG00000198467.12 TPM2 chr9 35681992 35691020 - protein_coding KNOWN OTTHUMG00000019878.3 9029 4047 54 ENSG00000203864.2 C1orf137 chr1 116694112 116706603 + protein_coding KNOWN OTTHUMG00000022754.1 12492 386 8 ENSG00000137076.17 TLN1 chr9 35696948 35732395 - protein_coding KNOWN OTTHUMG00000019874.4 35448 10076 87 ENSG00000275831.1 MIR6852 chr9 35710676 35710741 - miRNA KNOWN NA 66 66 1 ENSG00000107175.9 CREB3 chr9 35732320 35737007 + protein_coding KNOWN OTTHUMG00000019872.1 4688 1921 26 ENSG00000273945.1 MIR6853 chr9 35732922 35732995 + miRNA KNOWN NA 74 74 1 ENSG00000070610.13 GBA2 chr9 35736866 35749228 - protein_coding KNOWN OTTHUMG00000021024.1 12363 4803 60 ENSG00000107185.9 RGP1 chr9 35749287 35758575 + protein_coding KNOWN OTTHUMG00000019873.2 9289 7116 18 ENSG00000215183.4 MSMP chr9 35752990 35756613 - protein_coding KNOWN OTTHUMG00000019882.2 3624 787 6 ENSG00000228843.2 RP11-112J3.15 chr9 35756712 35757940 - antisense NOVEL OTTHUMG00000019883.2 1229 696 2 ENSG00000227388.2 RP11-112J3.16 chr9 35772163 35790432 + lincRNA NOVEL OTTHUMG00000019884.2 18270 952 5 ENSG00000159899.13 NPR2 chr9 35792154 35809732 + protein_coding KNOWN OTTHUMG00000019871.3 17579 3865 64 ENSG00000231072.1 GAPDHP64 chr1 116713833 116714835 - processed_pseudogene KNOWN OTTHUMG00000022755.1 1003 1003 1 ENSG00000137098.12 SPAG8 chr9 35808045 35812272 - protein_coding KNOWN OTTHUMG00000019875.3 4228 2722 69 ENSG00000263448.1 AL133410.1 chr9 35811476 35811550 - miRNA NOVEL NA 75 75 1 ENSG00000137133.9 HINT2 chr9 35812960 35815354 - protein_coding KNOWN OTTHUMG00000019886.2 2395 2395 28 ENSG00000137103.15 TMEM8B chr9 35814451 35854847 + protein_coding KNOWN OTTHUMG00000019885.5 40397 5444 65 ENSG00000204930.8 FAM221B chr9 35816391 35828747 - protein_coding KNOWN OTTHUMG00000019880.2 12357 3941 24 ENSG00000281205.1 LINC00950 chr9 35858738 35865518 + lincRNA KNOWN OTTHUMG00000189506.1 6781 6781 1 ENSG00000236083.1 OR13E1P chr9 35859062 35859983 - unitary_pseudogene KNOWN OTTHUMG00000019877.1 922 922 1 ENSG00000168828.5 OR13J1 chr9 35869263 35870601 - protein_coding KNOWN OTTHUMG00000019879.1 1339 1339 1 ENSG00000233659.1 NDUFA5P4 chr9 35874810 35875194 - processed_pseudogene KNOWN OTTHUMG00000019881.2 385 385 1 ENSG00000196196.2 HRCT1 chr9 35906192 35907141 + protein_coding KNOWN OTTHUMG00000154146.1 950 950 1 ENSG00000223489.1 NEFHP1 chr1 116739981 116742609 - processed_pseudogene KNOWN OTTHUMG00000022752.1 2629 2629 1 ENSG00000235387.1 LINC00961 chr9 35909483 35911686 + lincRNA NOVEL OTTHUMG00000019887.1 2204 1612 2 ENSG00000231518.1 RP11-327L3.3 chr9 35930012 35937151 + antisense NOVEL OTTHUMG00000019888.1 7140 357 3 ENSG00000225639.1 PGAM1P2 chr9 35943210 35943934 - processed_pseudogene KNOWN OTTHUMG00000019889.1 725 725 1 ENSG00000278889.2 OR2S2 chr9 35957108 35958154 - polymorphic_pseudogene KNOWN OTTHUMG00000019891.2 1047 1047 2 ENSG00000122718.5 OR2S2 chr9 35957139 35958098 - protein_coding KNOWN NA 960 960 1 ENSG00000213866.3 YBX1P10 chr9 35971344 35972318 - processed_pseudogene KNOWN OTTHUMG00000019890.1 975 975 1 ENSG00000179443.5 OR13C6P chr9 35991336 35992285 - unprocessed_pseudogene KNOWN OTTHUMG00000019892.1 950 950 1 ENSG00000243641.3 OR13C7 chr9 36002909 36003867 - polymorphic_pseudogene KNOWN OTTHUMG00000019893.2 959 959 1 ENSG00000228307.1 OR2S1P chr9 36013184 36014133 + unprocessed_pseudogene KNOWN OTTHUMG00000019894.1 950 950 1 ENSG00000236110.1 OR2AM1P chr9 36021692 36022113 + unprocessed_pseudogene KNOWN OTTHUMG00000019895.1 422 422 1 ENSG00000116824.4 CD2 chr1 116754385 116769228 + protein_coding KNOWN OTTHUMG00000022750.2 14844 1679 7 ENSG00000122707.10 RECK chr9 36036433 36124451 + protein_coding KNOWN OTTHUMG00000019898.1 88019 6045 41 ENSG00000276730.1 Hammerhead_HH9 chr9 36072686 36072762 + misc_RNA NOVEL NA 77 77 1 ENSG00000122694.14 GLIPR2 chr9 36136536 36163913 + protein_coding KNOWN OTTHUMG00000019900.2 27378 3055 20 ENSG00000185972.5 CCIN chr9 36169394 36171334 + protein_coding KNOWN OTTHUMG00000019901.1 1941 1941 1 ENSG00000122705.15 CLTA chr9 36190856 36304781 + protein_coding KNOWN OTTHUMG00000019896.4 113926 2515 57 ENSG00000159921.13 GNE chr9 36214441 36277056 - protein_coding KNOWN OTTHUMG00000019899.6 62616 5477 68 ENSG00000222760.1 RNU4-53P chr9 36267783 36267922 + snRNA KNOWN NA 140 140 1 ENSG00000215283.3 HMGB3P24 chr9 36303499 36304924 - processed_pseudogene KNOWN OTTHUMG00000019902.1 1426 622 2 ENSG00000137075.16 RNF38 chr9 36336396 36487548 - protein_coding KNOWN OTTHUMG00000019905.4 151153 6138 96 ENSG00000280576.1 AL354932.1 chr9 36499976 36500116 - miRNA NOVEL NA 141 141 1 ENSG00000225079.2 FTH1P22 chr1 116775104 116775623 - processed_pseudogene KNOWN OTTHUMG00000022797.2 520 520 1 ENSG00000165304.6 MELK chr9 36572862 36677683 + protein_coding KNOWN OTTHUMG00000019906.6 104822 3087 185 ENSG00000266255.1 MIR4475 chr9 36823539 36823599 - miRNA KNOWN NA 61 61 1 ENSG00000196092.11 PAX5 chr9 36833275 37034185 - protein_coding KNOWN OTTHUMG00000019907.3 200911 9333 122 ENSG00000258885.1 RP11-344B23.2 chr9 36856555 36861375 + antisense NOVEL OTTHUMG00000171060.1 4821 520 2 ENSG00000264922.1 MIR4540 chr9 36864254 36864308 - miRNA KNOWN NA 55 55 1 ENSG00000265368.1 MIR4476 chr9 36893462 36893531 - miRNA KNOWN NA 70 70 1 ENSG00000250850.2 RP11-297B17.3 chr9 37002697 37008040 + antisense NOVEL OTTHUMG00000164643.1 5344 739 2 ENSG00000125385.9 RP11-297B17.2 chr9 37046835 37047237 + processed_pseudogene KNOWN OTTHUMG00000019908.1 403 403 1 ENSG00000232920.1 LINC01400 chr9 37073531 37075792 - lincRNA NOVEL OTTHUMG00000019909.1 2262 947 2 ENSG00000260100.1 RP11-220I1.5 chr9 37078813 37079776 - lincRNA NOVEL OTTHUMG00000175668.1 964 964 1 ENSG00000221425.1 AL157904.1 chr1 116905150 116905294 + miRNA NOVEL NA 145 145 1 ENSG00000281649.1 EBLN3 chr9 37079857 37090507 + lincRNA NOVEL OTTHUMG00000019910.4 10651 6483 14 ENSG00000233242.2 RP11-220I1.2 chr9 37112548 37115490 - antisense NOVEL OTTHUMG00000019911.2 2943 1314 2 ENSG00000147905.16 ZCCHC7 chr9 37120539 37358149 + protein_coding KNOWN OTTHUMG00000019915.3 237611 3992 62 ENSG00000200502.1 Y_RNA chr9 37160137 37160237 + misc_RNA NOVEL NA 101 101 1 ENSG00000228292.1 RP11-220I1.4 chr9 37205112 37205368 - processed_pseudogene KNOWN OTTHUMG00000019912.2 257 257 1 ENSG00000216070.1 AL158155.1 chr9 37296023 37296104 - miRNA NOVEL NA 82 82 1 ENSG00000206784.1 Y_RNA chr9 37322259 37322371 + misc_RNA NOVEL NA 113 113 1 ENSG00000252723.2 RNU6-677P chr9 37333857 37333957 - snRNA KNOWN NA 101 101 1 ENSG00000224648.1 RP11-397D12.4 chr9 37383178 37384434 - lincRNA NOVEL OTTHUMG00000019916.1 1257 243 2 ENSG00000137106.16 GRHPR chr9 37422666 37436990 + protein_coding KNOWN OTTHUMG00000019914.5 14325 7226 63 ENSG00000272715.1 RP4-753F5.1 chr1 116909149 116909531 - lincRNA NOVEL OTTHUMG00000186394.1 383 383 1 ENSG00000236156.2 CHCHD4P3 chr9 37434177 37434586 + processed_pseudogene KNOWN OTTHUMG00000019913.2 410 410 1 ENSG00000168795.4 ZBTB5 chr9 37438114 37465399 - protein_coding KNOWN OTTHUMG00000019918.1 27286 4627 2 ENSG00000187988.5 KCTD9P3 chr9 37477149 37478317 + processed_pseudogene KNOWN OTTHUMG00000019919.2 1169 1169 1 ENSG00000137054.14 POLR1E chr9 37485935 37503697 + protein_coding KNOWN OTTHUMG00000019920.3 17763 2512 36 ENSG00000230188.1 RP11-405L18.4 chr9 37490421 37490893 - processed_pseudogene KNOWN OTTHUMG00000019921.1 473 473 1 ENSG00000234160.1 RP11-613M10.6 chr9 37509150 37510299 + antisense NOVEL OTTHUMG00000019924.1 1150 289 2 ENSG00000147912.11 FBXO10 chr9 37510892 37576349 - protein_coding KNOWN OTTHUMG00000019926.3 65458 5997 32 ENSG00000256966.5 RP11-613M10.8 chr9 37512547 37592469 - protein_coding NOVEL OTTHUMG00000168942.2 79923 3217 23 ENSG00000175768.11 TOMM5 chr9 37582646 37592642 - protein_coding KNOWN OTTHUMG00000019923.2 9997 3644 12 ENSG00000255872.3 RP11-613M10.9 chr9 37588413 38068687 - protein_coding NOVEL OTTHUMG00000168975.1 480275 2591 12 ENSG00000134247.9 PTGFRN chr1 116910057 116990358 + protein_coding KNOWN OTTHUMG00000012028.1 80302 6352 13 ENSG00000233111.1 RAB1C chr9 37636688 37637293 - processed_pseudogene KNOWN OTTHUMG00000019925.3 606 606 1 ENSG00000070601.8 FRMPD1 chr9 37651000 37746904 + protein_coding KNOWN OTTHUMG00000019927.2 95905 5867 35 ENSG00000201287.1 RN7SKP171 chr9 37661747 37662049 - misc_RNA KNOWN NA 303 303 1 ENSG00000165275.8 TRMT10B chr9 37753803 37778972 + protein_coding KNOWN OTTHUMG00000019933.2 25170 2866 58 ENSG00000107371.11 EXOSC3 chr9 37766978 37801437 - protein_coding KNOWN OTTHUMG00000019932.3 34460 3023 27 ENSG00000122741.14 DCAF10 chr9 37800502 37867666 + protein_coding KNOWN OTTHUMG00000019934.2 67165 8492 24 ENSG00000232454.2 RP11-3J10.7 chr9 37836044 37836394 + processed_pseudogene KNOWN OTTHUMG00000019931.2 351 351 1 ENSG00000226055.2 PAICSP1 chr9 37878116 37879493 + processed_pseudogene KNOWN OTTHUMG00000019930.3 1378 1217 2 ENSG00000122696.11 SLC25A51 chr9 37879400 37904353 - protein_coding KNOWN OTTHUMG00000019935.3 24954 3946 12 ENSG00000213839.4 TMX2P1 chr9 37885683 37886390 + processed_pseudogene KNOWN OTTHUMG00000019929.2 708 708 1 ENSG00000252510.1 RNA5SP55 chr1 116962347 116962471 - rRNA KNOWN NA 125 125 1 ENSG00000107338.9 SHB chr9 37919134 38069211 - protein_coding KNOWN OTTHUMG00000019936.1 150078 2783 6 ENSG00000251745.1 RNU7-124P chr9 37936707 37936768 - snRNA KNOWN NA 62 62 1 ENSG00000277122.1 AL161448.1 chr9 38146494 38146578 + miRNA NOVEL NA 85 85 1 ENSG00000200026.1 U8 chr9 38147428 38147561 + snoRNA NOVEL NA 134 134 1 ENSG00000223716.2 RP11-113O24.3 chr9 38360427 38376430 + lincRNA NOVEL OTTHUMG00000019939.2 16004 399 4 ENSG00000137124.6 ALDH1B1 chr9 38392664 38398661 + protein_coding KNOWN OTTHUMG00000019938.1 5998 3066 2 ENSG00000137142.4 IGFBPL1 chr9 38408994 38424447 - protein_coding KNOWN OTTHUMG00000019937.1 15454 1093 5 ENSG00000225254.2 ARMC8P1 chr9 38452782 38454070 - processed_pseudogene KNOWN OTTHUMG00000019940.2 1289 1289 1 ENSG00000215165.3 TCEA1P3 chr9 38478471 38479350 + processed_pseudogene KNOWN OTTHUMG00000019941.2 880 880 1 ENSG00000229511.1 GAS2L1P1 chr9 38486859 38488338 - processed_pseudogene KNOWN OTTHUMG00000019942.1 1480 1480 1 ENSG00000270330.1 RP5-892F13.2 chr1 7942372 7942726 + processed_pseudogene KNOWN OTTHUMG00000184257.1 355 355 1 ENSG00000134256.11 CD101 chr1 117001750 117036476 + protein_coding KNOWN OTTHUMG00000012029.1 34727 3828 24 ENSG00000237487.1 VN1R48P chr9 38504447 38505482 - processed_pseudogene KNOWN OTTHUMG00000019943.1 1036 1036 1 ENSG00000243085.1 RP11-392E22.3 chr9 38526831 38527032 + processed_pseudogene KNOWN OTTHUMG00000019944.1 202 202 1 ENSG00000176007.10 FAM220BP chr9 38527097 38527912 + processed_pseudogene KNOWN OTTHUMG00000019947.2 816 816 1 ENSG00000273036.2 FAM95C chr9 38540567 38545372 - lincRNA KNOWN OTTHUMG00000186350.2 4806 2774 6 ENSG00000273170.4 RP11-392E22.9 chr9 38540569 38577207 - protein_coding NOVEL OTTHUMG00000186324.2 36639 2558 24 ENSG00000259898.1 CYP4F33P chr9 38542314 38542569 - processed_pseudogene KNOWN OTTHUMG00000172707.1 256 256 1 ENSG00000272934.1 RP11-392E22.10 chr9 38542389 38543215 - processed_transcript NOVEL OTTHUMG00000019950.3 827 469 2 ENSG00000272904.1 RP11-392E22.11 chr9 38542479 38568422 - processed_transcript NOVEL OTTHUMG00000186351.1 25944 635 3 ENSG00000250989.1 RP11-392E22.5 chr9 38543104 38543446 - processed_pseudogene KNOWN OTTHUMG00000019945.1 343 343 1 ENSG00000180071.17 ANKRD18A chr9 38543253 38620660 - protein_coding KNOWN OTTHUMG00000186349.1 77408 5530 48 ENSG00000236137.1 RP11-27K13.3 chr1 117025482 117059490 - antisense NOVEL OTTHUMG00000012031.1 34009 1946 6 ENSG00000225345.3 SNX18P3 chr9 38566260 38568211 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000019946.3 1952 1952 2 ENSG00000204860.4 FAM201A chr9 38620474 38624990 + antisense KNOWN OTTHUMG00000019948.2 4517 3847 6 ENSG00000237557.1 YWHABP1 chr9 38643042 38643768 + processed_pseudogene KNOWN OTTHUMG00000019949.1 727 727 1 ENSG00000252725.1 RNU6-765P chr9 38680006 38680104 + snRNA KNOWN NA 99 99 1 ENSG00000228467.2 RP11-402N8.1 chr9 38804007 38851916 + lincRNA NOVEL OTTHUMG00000019951.2 47910 891 3 ENSG00000234680.1 VN2R3P chr9 39016969 39039594 + unitary_pseudogene KNOWN OTTHUMG00000152821.1 22626 1412 7 ENSG00000106714.16 CNTNAP3 chr9 39072767 39288315 - protein_coding KNOWN OTTHUMG00000019954.4 215549 9521 119 ENSG00000226625.1 RBM17P1 chr9 39154075 39155479 + processed_pseudogene KNOWN OTTHUMG00000019952.1 1405 1190 2 ENSG00000271454.1 RP11-290L7.5 chr9 39159071 39160319 + processed_pseudogene KNOWN OTTHUMG00000184684.1 1249 1249 1 ENSG00000243695.1 RP11-290L7.3 chr9 39173794 39174513 - processed_pseudogene KNOWN OTTHUMG00000019953.1 720 720 1 ENSG00000116830.10 TTF2 chr1 117060303 117107453 + protein_coding KNOWN OTTHUMG00000012030.5 47151 10181 49 ENSG00000278825.1 Metazoa_SRP chr9 39191100 39191360 + misc_RNA NOVEL NA 261 261 1 ENSG00000204849.6 SPATA31A1 chr9 39355669 39361962 + protein_coding KNOWN OTTHUMG00000013156.2 6294 4357 11 ENSG00000277024.1 RP11-347J14.4 chr9 39359890 39369105 - transcribed_processed_pseudogene KNOWN OTTHUMG00000013158.2 9216 2090 3 ENSG00000215112.6 FAM74A1 chr9 39371065 39376916 + lincRNA KNOWN OTTHUMG00000067121.2 5852 637 3 ENSG00000224038.1 RP11-347J14.8 chr9 39384506 39405305 - lincRNA NOVEL OTTHUMG00000067122.1 20800 476 3 ENSG00000231140.3 RP11-347J14.7 chr9 39395737 39397406 - lincRNA NOVEL OTTHUMG00000067120.3 1670 1077 2 ENSG00000198416.9 CTD-2173L22.4 chr9 39443815 39508885 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000171406.7 65071 3897 5 ENSG00000229707.1 SKP1P3 chr9 39485379 39485865 + processed_pseudogene KNOWN OTTHUMG00000013209.1 487 487 1 ENSG00000269692.1 FKBP4P2 chr9 39631046 39632416 + processed_pseudogene KNOWN OTTHUMG00000013210.2 1371 1371 1 ENSG00000273994.1 RP11-45O22.3 chr9 39651901 39652377 - processed_pseudogene KNOWN OTTHUMG00000067164.3 477 477 1 ENSG00000215930.1 MIR942 chr1 117094643 117094728 + miRNA KNOWN NA 86 86 1 ENSG00000234720.3 ATP5A1P8 chr9 39654241 39655531 - processed_pseudogene KNOWN OTTHUMG00000013211.3 1291 1291 1 ENSG00000226108.2 RAB28P1 chr9 39734670 39735628 + processed_pseudogene KNOWN OTTHUMG00000067166.2 959 641 2 ENSG00000232239.2 RBPJP5 chr9 39739747 39741193 - processed_pseudogene KNOWN OTTHUMG00000058627.2 1447 1447 1 ENSG00000278175.2 GLIDR chr9 39807361 39810063 - lincRNA KNOWN OTTHUMG00000189744.1 2703 2606 7 ENSG00000229273.1 RP11-104G3.2 chr9 39809562 39810019 + processed_pseudogene KNOWN OTTHUMG00000058638.1 458 458 1 ENSG00000204837.3 RP11-204M4.2 chr9 39817530 39818923 - unprocessed_pseudogene KNOWN OTTHUMG00000067165.2 1394 303 2 ENSG00000276692.1 RP11-104G3.7 chr9 39873931 39874390 - processed_pseudogene KNOWN OTTHUMG00000188716.1 460 460 1 ENSG00000277774.1 Metazoa_SRP chr9 39886861 39887144 - misc_RNA NOVEL NA 284 284 1 ENSG00000252724.1 SNORA70 chr9 39892446 39892540 + snoRNA NOVEL NA 95 95 1 ENSG00000232798.1 RP11-204M4.1 chr9 39892550 39892895 + processed_pseudogene KNOWN OTTHUMG00000058631.1 346 346 1 ENSG00000134253.8 TRIM45 chr1 117111060 117122587 - protein_coding KNOWN OTTHUMG00000012119.4 11528 4368 26 ENSG00000184961.5 AL772307.1 chr9 39983821 39984401 - processed_pseudogene KNOWN OTTHUMG00000066713.2 581 581 1 ENSG00000237846.1 RP11-216M21.1 chr9 40105822 40106527 + processed_pseudogene KNOWN OTTHUMG00000013280.1 706 706 1 ENSG00000230804.2 C2orf27AP3 chr9 40121962 40122540 + unprocessed_pseudogene KNOWN OTTHUMG00000013281.2 579 579 1 ENSG00000228136.1 RP11-216M21.5 chr9 40130921 40153147 + lincRNA NOVEL OTTHUMG00000066714.1 22227 347 3 ENSG00000236966.1 RP11-216M21.4 chr9 40131747 40132218 + processed_pseudogene KNOWN OTTHUMG00000066718.1 472 472 1 ENSG00000183148.6 ANKRD20A2 chr9 40223285 40266392 + protein_coding KNOWN OTTHUMG00000058641.2 43108 3954 25 ENSG00000212441.1 RNU6-1269P chr9 40233923 40234029 + snRNA KNOWN NA 107 107 1 ENSG00000240240.7 RP11-146D12.2 chr9 40264971 40329221 + processed_transcript NOVEL OTTHUMG00000058636.6 64251 2248 18 ENSG00000234812.1 RP11-146D12.6 chr9 40291275 40291502 - processed_pseudogene KNOWN OTTHUMG00000066719.1 228 228 1 ENSG00000231390.1 SNX18P8 chr9 40293082 40293955 + unprocessed_pseudogene KNOWN OTTHUMG00000066716.1 874 874 1 ENSG00000228453.1 RPS15AP9 chr1 117138229 117138609 + processed_pseudogene KNOWN OTTHUMG00000012117.1 381 381 1 ENSG00000223839.6 FAM95B1 chr9 40321299 40329221 + lincRNA KNOWN OTTHUMG00000058623.2 7923 7923 46 ENSG00000224681.1 RP11-146D12.5 chr9 40332995 40333460 - unprocessed_pseudogene KNOWN OTTHUMG00000066720.1 466 466 1 ENSG00000227069.1 CNN2P2 chr9 40346144 40347052 - processed_pseudogene KNOWN OTTHUMG00000067498.1 909 909 1 ENSG00000232433.2 GXYLT1P3 chr9 40348599 40349791 + processed_pseudogene KNOWN OTTHUMG00000067497.2 1193 1193 1 ENSG00000274157.1 RP11-341A11.3 chr9 40358454 40358682 + processed_pseudogene KNOWN OTTHUMG00000187748.1 229 229 1 ENSG00000278122.1 AQP7P3 chr9 40481558 40497592 - unprocessed_pseudogene KNOWN OTTHUMG00000013285.8 16035 1049 7 ENSG00000274067.1 ABC12-47964100C23.1 chr9 40481559 40497591 - unprocessed_pseudogene KNOWN OTTHUMG00000188952.1 16033 1038 7 ENSG00000184906.8 AC129778.2 chr9 40497850 40566779 + lincRNA NOVEL OTTHUMG00000066754.4 68930 3614 26 ENSG00000276500.1 BMS1P14 chr9 40505399 40566281 - lincRNA NOVEL OTTHUMG00000066753.3 60883 606 2 ENSG00000276266.1 CH17-80A12.1 chr9 40611252 40622155 - lincRNA NOVEL OTTHUMG00000188953.1 10904 1263 5 ENSG00000134258.15 VTCN1 chr1 117143587 117210960 - protein_coding KNOWN OTTHUMG00000012118.3 67374 3027 34 ENSG00000225380.4 IGKV1OR9-2 chr9 40641841 40642117 - IG_V_pseudogene KNOWN OTTHUMG00000066755.3 277 277 1 ENSG00000273743.1 FP325318.1 chr9 40685887 40685968 - miRNA NOVEL NA 82 82 1 ENSG00000276963.1 RP11-318K12.1 chr9 40755407 40767875 - unprocessed_pseudogene KNOWN OTTHUMG00000188577.2 12469 657 6 ENSG00000278331.1 U6 chr9 40759600 40759706 - snRNA NOVEL NA 107 107 1 ENSG00000275390.1 RP11-318K12.2 chr9 40767870 40806344 + lincRNA NOVEL OTTHUMG00000188578.1 38475 507 7 ENSG00000276868.1 RP11-318K12.3 chr9 40883634 40883763 + processed_pseudogene KNOWN OTTHUMG00000188579.1 130 130 1 ENSG00000274550.1 AL353626.1 chr9 40905509 40905584 - miRNA NOVEL NA 76 76 1 ENSG00000275704.1 FP565210.1 chr9 40915323 40915405 - miRNA NOVEL NA 83 83 1 ENSG00000278366.1 AL353763.1 chr9 40928770 40928852 - miRNA NOVEL NA 83 83 1 ENSG00000275377.1 MIR1299 chr9 40929010 40929092 - miRNA KNOWN NA 83 83 1 ENSG00000277141.1 Metazoa_SRP chr1 117243212 117243508 - misc_RNA NOVEL NA 297 297 1 ENSG00000276291.3 RP11-87H9.2 chr9 40992249 41217197 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000188611.1 224949 1664 24 ENSG00000277778.1 PGM5P2 chr9 41006999 41074617 - lincRNA NOVEL OTTHUMG00000188612.3 67619 1980 9 ENSG00000280077.1 RP11-87H9.4 chr9 41012231 41014133 + TEC KNOWN OTTHUMG00000188613.1 1903 1903 1 ENSG00000279456.1 RP11-87H9.5 chr9 41061290 41062917 + TEC KNOWN OTTHUMG00000188614.1 1628 1628 1 ENSG00000225655.4 PGM5-AS1 chr9 41073710 41076392 + lincRNA NOVEL OTTHUMG00000188615.2 2683 681 4 ENSG00000276462.1 BX255923.3 chr9 41100794 41106229 - lincRNA NOVEL OTTHUMG00000188616.2 5436 3064 7 ENSG00000273514.1 FOXD4L6 chr9 41126430 41128463 - protein_coding KNOWN OTTHUMG00000188618.2 2034 2034 1 ENSG00000215126.9 CBWD7 chr9 41131306 41199261 - protein_coding KNOWN OTTHUMG00000067194.5 67956 10393 197 ENSG00000276029.1 MIR4477A chr9 41233755 41233835 + miRNA KNOWN NA 81 81 1 ENSG00000277049.1 5S_rRNA chr9 41237440 41237557 - rRNA NOVEL NA 118 118 1 ENSG00000235202.1 LINC01525 chr1 117295520 117321336 + lincRNA NOVEL OTTHUMG00000012147.1 25817 511 3 ENSG00000279561.1 AL845472.1 chr9 41269916 41273997 - pseudogene KNOWN NA 4082 4080 2 ENSG00000275450.1 RP11-4L24.3 chr9 41276280 41282846 + lincRNA NOVEL OTTHUMG00000188453.2 6567 3123 3 ENSG00000278647.1 RP11-4L24.2 chr9 41280460 41280787 + transcribed_processed_pseudogene KNOWN OTTHUMG00000188454.2 328 328 1 ENSG00000274680.1 RP11-4L24.1 chr9 41292887 41294125 + processed_pseudogene KNOWN OTTHUMG00000188455.1 1239 1239 1 ENSG00000276502.1 RP11-187C18.5 chr9 41310816 41332962 - lincRNA NOVEL OTTHUMG00000188490.3 22147 371 3 ENSG00000276832.1 RP11-187C18.4 chr9 41341000 41342041 - unprocessed_pseudogene KNOWN OTTHUMG00000188491.2 1042 581 3 ENSG00000275160.1 RP11-187C18.3 chr9 41479960 41480548 + processed_pseudogene KNOWN OTTHUMG00000188492.1 589 589 1 ENSG00000277340.1 RP11-157L3.3 chr9 41573156 41573453 - processed_pseudogene KNOWN OTTHUMG00000188510.1 298 298 1 ENSG00000276094.1 SNORA70 chr9 41573512 41573606 - snoRNA NOVEL NA 95 95 1 ENSG00000276562.1 Metazoa_SRP chr9 41578903 41579186 + misc_RNA NOVEL NA 284 284 1 ENSG00000271427.1 RP11-188D8.1 chr1 117364899 117365473 - lincRNA NOVEL OTTHUMG00000185248.1 575 575 1 ENSG00000275493.1 RP11-157L3.4 chr9 41644430 41644770 - processed_pseudogene KNOWN OTTHUMG00000188511.1 341 341 1 ENSG00000278077.1 RP11-157L3.10 chr9 41644771 41644981 + processed_pseudogene KNOWN OTTHUMG00000188512.1 211 211 1 ENSG00000278054.1 RP11-34H11.3 chr9 41647825 41648035 - processed_pseudogene KNOWN OTTHUMG00000188529.1 211 211 1 ENSG00000276135.1 RP11-157L3.5 chr9 41648023 41648425 + processed_pseudogene KNOWN OTTHUMG00000188514.1 403 403 1 ENSG00000276412.1 RP11-157L3.9 chr9 41651935 41652172 - processed_pseudogene KNOWN OTTHUMG00000188515.1 238 238 1 ENSG00000277979.1 RP11-157L3.6 chr9 41652895 41652973 - processed_pseudogene KNOWN OTTHUMG00000188516.1 79 79 1 ENSG00000275239.3 RP11-157L3.12 chr9 41657708 41699072 - lincRNA NOVEL OTTHUMG00000189107.1 41365 1123 11 ENSG00000278028.1 Y_RNA chr9 41672295 41672406 - misc_RNA NOVEL NA 112 112 1 ENSG00000274688.1 RP11-34H11.6 chr9 41700480 41700696 - processed_pseudogene KNOWN OTTHUMG00000188530.1 217 217 1 ENSG00000278001.1 RP11-157L3.11 chr9 41700682 41701096 + processed_pseudogene KNOWN OTTHUMG00000188517.1 415 415 1 ENSG00000116288.11 PARK7 chr1 7954291 7985505 + protein_coding KNOWN OTTHUMG00000001210.2 31215 2397 62 ENSG00000198162.11 MAN1A2 chr1 117367449 117528872 + protein_coding KNOWN OTTHUMG00000012149.2 161424 9667 33 ENSG00000275297.1 RP11-292F9.1 chr9 41760088 41764175 + processed_transcript NOVEL OTTHUMG00000188522.1 4088 1855 4 ENSG00000154529.13 CNTNAP3B chr9 41890314 42129510 - protein_coding KNOWN OTTHUMG00000013174.10 239197 13220 160 ENSG00000237207.2 RBM17P3 chr9 41974362 41975768 + processed_pseudogene KNOWN OTTHUMG00000058637.2 1407 1192 2 ENSG00000270909.1 RP11-24B13.2 chr9 41979352 41983753 + processed_pseudogene KNOWN OTTHUMG00000184630.1 4402 1809 2 ENSG00000273717.1 Metazoa_SRP chr9 42011350 42011610 + misc_RNA NOVEL NA 261 261 1 ENSG00000185775.9 SPATA31A6 chr9 42183659 42189882 + protein_coding KNOWN OTTHUMG00000013224.1 6224 4307 7 ENSG00000239986.2 RP11-366N18.2 chr9 42196333 42196662 - processed_pseudogene KNOWN OTTHUMG00000013225.2 330 330 1 ENSG00000277260.1 FAM74A7 chr9 42199000 42204988 + lincRNA KNOWN OTTHUMG00000187514.1 5989 727 2 ENSG00000276277.1 RP11-366N18.5 chr9 42213841 42213918 - processed_pseudogene KNOWN OTTHUMG00000187755.1 78 78 1 ENSG00000275649.1 RP11-286O1.1 chr9 42231811 42354454 + lincRNA NOVEL OTTHUMG00000189109.1 122644 616 4 ENSG00000279513.1 RP4-675C20.4 chr1 117493515 117495006 + TEC KNOWN OTTHUMG00000183891.1 1492 1492 1 ENSG00000268234.1 FKBP4P6 chr9 42384805 42386136 + processed_pseudogene KNOWN OTTHUMG00000066806.2 1332 1332 1 ENSG00000277213.1 RP11-286O1.2 chr9 42408526 42409006 - processed_pseudogene KNOWN OTTHUMG00000189110.1 481 481 1 ENSG00000234861.2 ATP5A1P6 chr9 42410830 42412150 - processed_pseudogene KNOWN OTTHUMG00000066804.3 1321 1321 1 ENSG00000227353.1 RAB28P3 chr9 42492663 42493570 + processed_pseudogene KNOWN OTTHUMG00000013227.1 908 597 2 ENSG00000227924.2 RBPJP6 chr9 42497704 42499134 - processed_pseudogene KNOWN OTTHUMG00000013226.2 1431 1431 1 ENSG00000237357.2 RP11-475I24.3 chr9 42566679 42569353 - lincRNA NOVEL OTTHUMG00000013230.1 2675 2579 5 ENSG00000212952.6 RP11-475I24.9 chr9 42568865 42569315 + processed_pseudogene KNOWN OTTHUMG00000187213.2 451 451 1 ENSG00000229311.1 RP11-475I24.8 chr9 42579414 42586534 - lincRNA NOVEL OTTHUMG00000067212.1 7121 3614 3 ENSG00000204816.5 RP11-475I24.1 chr9 42625436 42626813 + unprocessed_pseudogene KNOWN OTTHUMG00000013228.3 1378 291 2 ENSG00000230245.2 RP11-475I24.7 chr9 42636788 42637139 - processed_pseudogene KNOWN OTTHUMG00000067211.2 352 352 1 ENSG00000226755.2 VPS25P1 chr1 117549415 117549922 + processed_pseudogene KNOWN OTTHUMG00000012148.2 508 508 1 ENSG00000216829.6 RP11-175I6.1 chr9 42667506 42668887 - unprocessed_pseudogene KNOWN OTTHUMG00000013561.2 1382 295 2 ENSG00000233424.2 RP11-175I6.5 chr9 42707800 42714539 + lincRNA NOVEL OTTHUMG00000058152.2 6740 3224 3 ENSG00000204818.4 RP11-213O5.4 chr9 42795392 42800672 + unprocessed_pseudogene KNOWN OTTHUMG00000013558.2 5281 1659 5 ENSG00000224537.1 MEP1AP4 chr9 42817105 42823213 - unprocessed_pseudogene KNOWN OTTHUMG00000013568.1 6109 1087 4 ENSG00000236816.2 ANKRD20A7P chr9 42852675 42894751 + unprocessed_pseudogene KNOWN OTTHUMG00000066784.3 42077 2414 15 ENSG00000238529.1 RNU6-599P chr9 42863200 42863306 + snRNA KNOWN NA 107 107 1 ENSG00000170165.5 CR848007.2 chr9 42901238 42920095 + unprocessed_pseudogene KNOWN OTTHUMG00000066794.1 18858 1699 8 ENSG00000273900.1 RP11-459O16.7 chr9 42921443 42921670 - processed_pseudogene KNOWN OTTHUMG00000188573.1 228 228 1 ENSG00000275144.1 SNX18P5 chr9 42923277 42924144 + unprocessed_pseudogene KNOWN OTTHUMG00000188574.1 868 868 1 ENSG00000230635.2 CYP4F60P chr9 42950566 42951630 + unprocessed_pseudogene KNOWN OTTHUMG00000188575.1 1065 549 3 ENSG00000236866.4 AL157902.3 chr1 117596832 117605770 - antisense NOVEL OTTHUMG00000013706.1 8939 1091 8 ENSG00000229079.1 CR848007.5 chr9 42959280 42960066 - processed_pseudogene KNOWN OTTHUMG00000066792.1 787 787 1 ENSG00000213816.3 CNN2P4 chr9 42972386 42973289 - processed_pseudogene KNOWN OTTHUMG00000066793.2 904 904 1 ENSG00000276591.1 GXYLT1P5 chr9 42974855 42978320 + transcribed_processed_pseudogene KNOWN OTTHUMG00000188571.2 3466 1630 3 ENSG00000277697.1 RP11-459O16.9 chr9 42978851 42979918 + lincRNA NOVEL OTTHUMG00000188956.1 1068 535 2 ENSG00000276128.1 RP11-459O16.8 chr9 42981772 42988167 + lincRNA NOVEL OTTHUMG00000188572.2 6396 2247 2 ENSG00000277737.2 FP325317.1 chr9 43109628 43127172 - protein_coding KNOWN NA 17545 1681 7 ENSG00000274431.1 BX088702.1 chr9 60519734 60519817 + miRNA NOVEL NA 84 84 1 ENSG00000276235.1 BX088702.2 chr9 60521458 60521541 + miRNA NOVEL NA 84 84 1 ENSG00000277648.1 BX088702.3 chr9 60522897 60522978 + miRNA NOVEL NA 82 82 1 ENSG00000277886.1 BX088702.4 chr9 60523280 60523362 + miRNA NOVEL NA 83 83 1 ENSG00000183508.4 FAM46C chr1 117605934 117628372 + protein_coding KNOWN OTTHUMG00000013703.1 22439 5751 2 ENSG00000277598.1 RP11-49E18.1 chr9 60546920 60547154 - processed_pseudogene KNOWN OTTHUMG00000188282.1 235 235 1 ENSG00000276581.2 SPATA31A5 chr9 60914374 60920650 + protein_coding KNOWN OTTHUMG00000188283.2 6277 4256 4 ENSG00000275628.1 RP11-144A16.6 chr9 60918581 60927822 - lincRNA NOVEL OTTHUMG00000188284.1 9242 1988 2 ENSG00000274916.1 RP11-144A16.5 chr9 60927098 60927491 - transcribed_processed_pseudogene KNOWN OTTHUMG00000188285.1 394 394 1 ENSG00000274516.1 FAM74A6 chr9 60929774 60936746 + lincRNA NOVEL OTTHUMG00000188291.1 6973 1802 5 ENSG00000273676.1 RP11-144A16.3 chr9 60929927 60930407 + transcribed_processed_pseudogene KNOWN OTTHUMG00000188286.1 481 481 1 ENSG00000276422.1 RP11-144A16.8 chr9 60943311 60964185 - lincRNA NOVEL OTTHUMG00000188292.1 20875 970 7 ENSG00000278485.1 RP11-144A16.4 chr9 60944555 60944636 - processed_pseudogene KNOWN OTTHUMG00000188287.1 82 82 1 ENSG00000276040.3 SPATA31A7 chr9 61190003 61196280 + protein_coding KNOWN OTTHUMG00000188536.1 6278 4989 29 ENSG00000277412.1 RP11-101E5.6 chr9 61194211 61203446 - antisense NOVEL OTTHUMG00000188537.1 9236 1988 2 ENSG00000213262.3 AL365331.2 chr1 117640812 117641639 - processed_pseudogene KNOWN OTTHUMG00000013704.2 828 828 1 ENSG00000276149.1 RP11-101E5.2 chr9 61202718 61203087 - transcribed_processed_pseudogene KNOWN OTTHUMG00000188538.1 370 370 1 ENSG00000274583.1 FAM74A4 chr9 61205258 61212373 + transcribed_processed_pseudogene KNOWN OTTHUMG00000188539.2 7116 1956 6 ENSG00000275676.1 RP11-101E5.1 chr9 61229913 61231863 - lincRNA NOVEL OTTHUMG00000188540.1 1951 1126 2 ENSG00000276522.1 Metazoa_SRP chr9 61427617 61427877 - misc_RNA NOVEL NA 261 261 1 ENSG00000277109.1 RP11-160N1.11 chr9 61581813 61582675 + unprocessed_pseudogene KNOWN OTTHUMG00000187757.1 863 232 2 ENSG00000231248.2 RP11-160N1.9 chr9 61615876 61627683 + lincRNA NOVEL OTTHUMG00000067216.2 11808 718 4 ENSG00000238933.1 Y_RNA chr9 61642383 61642494 + misc_RNA NOVEL NA 112 112 1 ENSG00000204814.5 RP11-160N1.10 chr9 61659733 61662690 + lincRNA NOVEL OTTHUMG00000067215.3 2958 997 5 ENSG00000231454.2 RP11-160N1.8 chr9 61665579 61666386 + processed_pseudogene KNOWN OTTHUMG00000013236.1 808 284 2 ENSG00000273940.1 Metazoa_SRP chr9 61789143 61789426 + misc_RNA NOVEL NA 284 284 1 ENSG00000212266.1 SNORA40 chr1 117688621 117688742 - snoRNA NOVEL NA 122 122 1 ENSG00000154537.4 FAM27C chr9 61854162 61855331 + protein_coding KNOWN OTTHUMG00000013240.1 1170 616 2 ENSG00000277624.1 RP11-374M1.11 chr9 61858710 61858908 + processed_pseudogene KNOWN OTTHUMG00000188549.1 199 199 1 ENSG00000170152.4 RP11-374M1.7 chr9 61861853 61862567 - processed_pseudogene KNOWN OTTHUMG00000013246.1 715 200 2 ENSG00000204805.8 FAM27E4 chr9 61861995 61862336 + processed_pseudogene KNOWN OTTHUMG00000184179.1 342 342 1 ENSG00000235659.1 RP11-374M1.5 chr9 61865755 61866965 - lincRNA NOVEL OTTHUMG00000013244.1 1211 439 2 ENSG00000223379.1 RP11-374M1.4 chr9 61868727 61887084 + lincRNA NOVEL OTTHUMG00000013243.1 18358 492 2 ENSG00000238749.1 Y_RNA chr9 61883640 61883751 - misc_RNA NOVEL NA 112 112 1 ENSG00000229697.2 RP11-374M1.3 chr9 61898805 61911022 - lincRNA NOVEL OTTHUMG00000013242.2 12218 778 8 ENSG00000276795.1 RP11-374M1.10 chr9 61912704 61913115 + processed_pseudogene KNOWN OTTHUMG00000188551.1 412 412 1 ENSG00000276845.1 RP11-374M1.9 chr9 61944232 61945136 - unprocessed_pseudogene KNOWN OTTHUMG00000187761.1 905 219 2 ENSG00000270719.1 RP11-134N8.2 chr1 117700029 117700242 - processed_pseudogene KNOWN OTTHUMG00000184342.1 214 214 1 ENSG00000231527.4 RP11-374M1.2 chr9 61972240 61976380 + processed_transcript NOVEL OTTHUMG00000013241.2 4141 1940 10 ENSG00000231838.1 RP11-449H15.2 chr9 62028426 62076349 + lincRNA NOVEL OTTHUMG00000058669.1 47924 891 3 ENSG00000231995.2 RP11-111F5.2 chr9 62266319 62266919 + processed_pseudogene KNOWN OTTHUMG00000013298.1 601 601 1 ENSG00000231212.1 RP11-111F5.3 chr9 62349941 62351536 - lincRNA NOVEL OTTHUMG00000013300.1 1596 787 5 ENSG00000236450.1 RP11-111F5.1 chr9 62357834 62358140 - processed_pseudogene KNOWN OTTHUMG00000034379.1 307 307 1 ENSG00000252133.1 SNORA70 chr9 62358191 62358285 - snoRNA NOVEL NA 95 95 1 ENSG00000275230.1 Metazoa_SRP chr9 62363581 62363864 + misc_RNA NOVEL NA 284 284 1 ENSG00000204802.3 RP11-111F5.4 chr9 62374128 62376836 - lincRNA NOVEL OTTHUMG00000013301.1 2709 2709 9 ENSG00000227449.7 RP11-111F5.5 chr9 62376161 62435199 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000013302.3 59039 2977 7 ENSG00000233651.2 RP11-111F5.8 chr9 62387171 62394004 - lincRNA NOVEL OTTHUMG00000067237.2 6834 3325 3 ENSG00000228217.1 AL390877.1 chr1 117778087 117778506 - processed_pseudogene KNOWN OTTHUMG00000013705.1 420 420 1 ENSG00000226429.2 RP11-111F5.6 chr9 62395370 62395678 - unprocessed_pseudogene KNOWN OTTHUMG00000013299.2 309 309 1 ENSG00000224603.1 RP11-96J15.1 chr9 62444256 62444634 - processed_pseudogene KNOWN OTTHUMG00000058625.1 379 379 1 ENSG00000204801.7 RP11-96J15.2 chr9 62474948 62476333 - unprocessed_pseudogene KNOWN OTTHUMG00000058630.1 1386 227 2 ENSG00000232827.2 LINC01189 chr9 62515191 62522018 + lincRNA NOVEL OTTHUMG00000058150.1 6828 3321 3 ENSG00000226007.2 RP11-211N8.2 chr9 62532337 62534724 + lincRNA NOVEL OTTHUMG00000013217.2 2388 2274 7 ENSG00000212951.5 RP11-211N8.3 chr9 62532397 62532853 - unprocessed_pseudogene KNOWN OTTHUMG00000013218.1 457 457 1 ENSG00000278213.1 RP11-211N8.8 chr9 62559839 62569907 + unprocessed_pseudogene KNOWN OTTHUMG00000187765.1 10069 888 6 ENSG00000234217.2 RBPJP7 chr9 62601226 62602672 + processed_pseudogene KNOWN OTTHUMG00000013219.2 1447 1447 1 ENSG00000236825.2 RP11-211N8.5 chr9 62606797 62607748 - processed_pseudogene KNOWN OTTHUMG00000013220.2 952 641 2 ENSG00000234451.1 RP11-211N8.6 chr9 62609725 62610799 - processed_pseudogene KNOWN OTTHUMG00000013221.1 1075 1075 1 ENSG00000196505.9 GDAP2 chr1 117863485 117929630 - protein_coding KNOWN OTTHUMG00000012199.2 66146 10496 51 ENSG00000241571.2 ATP5A1P7 chr9 62686912 62688190 + processed_pseudogene KNOWN OTTHUMG00000013191.2 1279 1279 1 ENSG00000234276.1 BX664724.4 chr9 62690033 62690534 + processed_pseudogene KNOWN OTTHUMG00000013193.1 502 502 1 ENSG00000235256.1 FKBP4P7 chr9 62710036 62711398 - processed_pseudogene KNOWN OTTHUMG00000013190.2 1363 1363 1 ENSG00000238113.5 LINC01410 chr9 62801461 62813486 + lincRNA NOVEL OTTHUMG00000013291.3 12026 3038 11 ENSG00000202474.1 RNA5SP283 chr9 62802320 62802438 - rRNA KNOWN NA 119 119 1 ENSG00000229422.1 RP11-262H14.5 chr9 62837748 62838372 - processed_pseudogene KNOWN OTTHUMG00000058163.1 625 625 1 ENSG00000184523.3 PTGER4P2 chr9 62843919 62844170 + processed_pseudogene KNOWN OTTHUMG00000058168.2 252 252 1 ENSG00000237451.3 CDK2AP2P2 chr9 62844818 62845184 + processed_pseudogene KNOWN OTTHUMG00000013292.1 367 367 1 ENSG00000234665.7 RP11-262H14.3 chr9 62856999 62898087 - lincRNA NOVEL OTTHUMG00000013293.5 41089 4241 26 ENSG00000238245.2 MYO5BP2 chr9 62857208 62858484 + processed_pseudogene KNOWN OTTHUMG00000058165.2 1277 1277 1 ENSG00000200344.1 Y_RNA chr1 7982881 7982983 - misc_RNA NOVEL NA 103 103 1 ENSG00000065183.14 WDR3 chr1 117929720 117966542 + protein_coding KNOWN OTTHUMG00000012197.2 36823 10275 48 ENSG00000227582.2 RP11-262H14.7 chr9 62860873 62864957 - transcribed_processed_pseudogene KNOWN OTTHUMG00000058166.2 4085 1489 3 ENSG00000219693.3 RP11-262H14.11 chr9 62888535 62889921 + unprocessed_pseudogene KNOWN OTTHUMG00000067257.1 1387 292 2 ENSG00000170161.6 RP11-262H14.4 chr9 62897449 62900104 + lincRNA NOVEL OTTHUMG00000013294.2 2656 2541 7 ENSG00000273509.1 RP11-262H14.12 chr9 62924911 62934964 + unprocessed_pseudogene KNOWN OTTHUMG00000187791.1 10054 906 6 ENSG00000244081.1 RP11-350D23.4 chr9 63025597 63025993 + unprocessed_pseudogene KNOWN OTTHUMG00000134319.1 397 397 1 ENSG00000235355.1 RP11-381O7.4 chr9 63046170 63046873 - processed_pseudogene KNOWN OTTHUMG00000067267.1 704 704 1 ENSG00000234320.1 RP11-381O7.6 chr9 63049135 63049777 + processed_pseudogene KNOWN OTTHUMG00000067264.1 643 643 1 ENSG00000198312.4 BMS1P9 chr9 63055641 63059217 + unprocessed_pseudogene KNOWN OTTHUMG00000034439.2 3577 885 6 ENSG00000182021.8 RP11-381O7.3 chr9 63111255 63127100 - lincRNA NOVEL OTTHUMG00000067266.4 15846 5046 24 ENSG00000176115.9 AQP7P4 chr9 63127359 63143401 + unprocessed_pseudogene KNOWN OTTHUMG00000013311.3 16043 1042 7 ENSG00000155761.12 SPAG17 chr1 117953861 118185223 - protein_coding KNOWN OTTHUMG00000012198.3 231363 9552 111 ENSG00000265285.1 AL591379.1 chr9 63189961 63190027 + miRNA NOVEL NA 67 67 1 ENSG00000186466.5 AQP7P1 chr9 63317067 63333091 - unprocessed_pseudogene KNOWN OTTHUMG00000013312.3 16025 1045 7 ENSG00000228522.2 RP11-236F9.2 chr9 63330326 63343660 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000067275.3 13335 873 8 ENSG00000237238.2 BMS1P10 chr9 63372803 63380011 - unprocessed_pseudogene KNOWN OTTHUMG00000067277.1 7209 1120 8 ENSG00000276059.1 FO203515.1 chr9 63485285 63485366 - miRNA NOVEL NA 82 82 1 ENSG00000233555.2 RP11-452D2.1 chr9 63581254 63581834 - processed_pseudogene KNOWN OTTHUMG00000013317.2 581 581 1 ENSG00000234042.1 RP11-452D2.2 chr9 63703065 63703755 + processed_pseudogene KNOWN OTTHUMG00000067322.1 691 691 1 ENSG00000268951.1 RP11-149F8.3 chr9 63719864 63720441 + processed_pseudogene KNOWN OTTHUMG00000058677.2 578 578 1 ENSG00000224267.1 RP11-149F8.5 chr9 63728877 63744910 + lincRNA NOVEL OTTHUMG00000058671.1 16034 347 3 ENSG00000225360.1 RP11-149F8.4 chr9 63729702 63730173 + processed_pseudogene KNOWN OTTHUMG00000058667.1 472 472 1 ENSG00000222209.1 RNA5SP56 chr1 118264372 118264489 - rRNA KNOWN NA 118 118 1 ENSG00000228656.1 MYO5BP3 chr9 63761546 63762824 - processed_pseudogene KNOWN OTTHUMG00000058679.1 1279 1279 1 ENSG00000226020.4 CDK2AP2P3 chr9 63774870 63775241 - processed_pseudogene KNOWN OTTHUMG00000058678.2 372 372 1 ENSG00000239684.2 PTGER4P3 chr9 63775892 63776143 - processed_pseudogene KNOWN OTTHUMG00000058665.2 252 252 1 ENSG00000225411.2 RP11-764K9.1 chr9 63802144 63814159 - lincRNA NOVEL OTTHUMG00000058662.2 12016 2878 5 ENSG00000207277.1 RNA5SP284 chr9 63813190 63813307 + rRNA KNOWN NA 118 118 1 ENSG00000232815.1 RP11-764K9.2 chr9 63817748 63818462 - unprocessed_pseudogene KNOWN OTTHUMG00000058675.1 715 715 1 ENSG00000266017.1 MIR4477B chr9 63819574 63819654 + miRNA KNOWN NA 81 81 1 ENSG00000215548.2 RP11-764K9.4 chr9 63832127 63859641 - unprocessed_pseudogene KNOWN OTTHUMG00000058676.2 27515 931 9 ENSG00000204790.9 BX255923.2 chr9 63974762 64004155 - unprocessed_pseudogene KNOWN OTTHUMG00000066820.7 29394 386 7 ENSG00000275068.1 U6 chr9 64082429 64082534 + snRNA NOVEL NA 106 106 1 ENSG00000226126.2 PSMC1P12 chr1 118614333 118615646 - processed_pseudogene KNOWN OTTHUMG00000012013.2 1314 1314 1 ENSG00000172014.12 ANKRD20A4 chr9 64369394 64413142 + protein_coding KNOWN OTTHUMG00000066855.3 43749 4510 25 ENSG00000238551.1 RNU6-1193P chr9 64380194 64380300 + snRNA KNOWN NA 107 107 1 ENSG00000224185.1 SNX18P9 chr9 64439346 64440180 + processed_pseudogene KNOWN OTTHUMG00000034632.1 835 835 1 ENSG00000229156.1 RP11-250H24.2 chr9 64462819 64463196 + processed_pseudogene KNOWN OTTHUMG00000034633.2 378 378 1 ENSG00000224106.1 CYP4F25P chr9 64465463 64466498 + unprocessed_pseudogene KNOWN OTTHUMG00000067335.1 1036 520 3 ENSG00000224762.1 CR769776.3 chr9 64473040 64473826 - processed_pseudogene KNOWN OTTHUMG00000066856.1 787 787 1 ENSG00000235832.2 CNN2P3 chr9 64486164 64487069 - processed_pseudogene KNOWN OTTHUMG00000013328.2 906 906 1 ENSG00000235310.1 GXYLT1P6 chr9 64488600 64489786 + processed_pseudogene KNOWN OTTHUMG00000013327.2 1187 1187 1 ENSG00000277869.1 RP11-250H24.7 chr9 64498517 64498745 + processed_pseudogene KNOWN OTTHUMG00000187802.1 229 229 1 ENSG00000181997.8 AQP7P2 chr9 64621560 64637586 - unprocessed_pseudogene KNOWN OTTHUMG00000013329.2 16027 1041 7 ENSG00000229911.2 RP4-630J13.1 chr1 118712999 118713678 + processed_pseudogene KNOWN OTTHUMG00000012012.2 680 680 1 ENSG00000176134.5 RP11-574E24.3 chr9 64637845 64652556 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000187218.1 14712 2662 6 ENSG00000225883.2 BMS1P11 chr9 64705734 64709311 - unprocessed_pseudogene KNOWN OTTHUMG00000066928.1 3578 885 6 ENSG00000235932.2 RP11-250H24.6 chr9 64737403 64737755 - processed_pseudogene KNOWN OTTHUMG00000067336.2 353 353 1 ENSG00000156755.10 IGKV1OR-2 chr9 64765054 64765535 - IG_V_pseudogene KNOWN OTTHUMG00000013330.3 482 350 2 ENSG00000239028.1 AL359955.1 chr9 64809342 64809423 - miRNA NOVEL NA 82 82 1 ENSG00000271225.1 BNIP3P4 chr9 64810865 64811429 - processed_pseudogene KNOWN OTTHUMG00000184631.1 565 565 1 ENSG00000197550.3 RP11-460N11.2 chr9 64817870 64836341 + unprocessed_pseudogene KNOWN OTTHUMG00000013331.1 18472 3275 5 ENSG00000223602.2 AC125634.1 chr9 64878790 64889063 - unprocessed_pseudogene KNOWN OTTHUMG00000066924.1 10274 1403 5 ENSG00000206804.1 RNU6-1293P chr9 64880369 64880475 - snRNA KNOWN NA 107 107 1 ENSG00000224599.1 BMS1P12 chr9 65189995 65193610 - unprocessed_pseudogene KNOWN OTTHUMG00000067343.1 3616 706 5 ENSG00000092607.12 TBX15 chr1 118883046 118989556 - protein_coding KNOWN OTTHUMG00000012263.2 106511 3806 20 ENSG00000236252.2 RP11-15J10.8 chr9 65219987 65230861 - transcribed_processed_pseudogene KNOWN OTTHUMG00000067344.2 10875 1263 6 ENSG00000267085.1 RP11-15J10.9 chr9 65222522 65222777 - processed_pseudogene KNOWN OTTHUMG00000180825.1 256 256 1 ENSG00000204780.5 IGKV1OR9-1 chr9 65250543 65250826 - IG_V_pseudogene KNOWN OTTHUMG00000013334.2 284 284 1 ENSG00000204779.2 FOXD4L5 chr9 65282101 65285209 - protein_coding KNOWN OTTHUMG00000013332.1 3109 3109 1 ENSG00000204778.4 RP11-15J10.1 chr9 65287914 65323015 - unprocessed_pseudogene KNOWN OTTHUMG00000013333.1 35102 655 9 ENSG00000276723.1 Y_RNA chr9 65573384 65573495 + misc_RNA NOVEL NA 112 112 1 ENSG00000280286.1 ABC14-1080714F14.1 chr9 65646982 65652679 - unprocessed_pseudogene KNOWN OTTHUMG00000189283.1 5698 341 4 ENSG00000147996.15 CBWD5 chr9 65668805 65734041 + protein_coding KNOWN OTTHUMG00000013336.3 65237 12708 279 ENSG00000184659.5 FOXD4L4 chr9 65736555 65738784 + protein_coding KNOWN OTTHUMG00000013337.2 2230 2230 1 ENSG00000204776.6 IGKV1OR-3 chr9 65770955 65771434 + IG_V_pseudogene KNOWN OTTHUMG00000013335.4 480 348 2 ENSG00000226172.2 RP4-712E4.1 chr1 119000344 119001392 - lincRNA NOVEL OTTHUMG00000012337.1 1049 653 2 ENSG00000237904.2 RP11-460E7.9 chr9 65798726 65799124 + processed_pseudogene KNOWN OTTHUMG00000067353.2 399 399 1 ENSG00000235893.5 RP11-460E7.8 chr9 65816932 65817472 - processed_pseudogene KNOWN OTTHUMG00000067355.1 541 541 1 ENSG00000231701.1 BMS1P13 chr9 65828120 65831696 + unprocessed_pseudogene KNOWN OTTHUMG00000067356.1 3577 885 6 ENSG00000279955.2 RP11-1221G12.2 chr9 65865190 65877274 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000189281.1 12085 920 8 ENSG00000279688.1 RP11-1221G12.3 chr9 65878766 65894790 + unprocessed_pseudogene KNOWN OTTHUMG00000189282.1 16025 1041 7 ENSG00000274893.1 RP11-15E1.5 chr9 66014525 66020816 - lincRNA NOVEL OTTHUMG00000188309.1 6292 2254 2 ENSG00000273668.1 RP11-15E1.4 chr9 66017643 66017868 - transcribed_processed_pseudogene KNOWN OTTHUMG00000188676.1 226 226 1 ENSG00000275026.1 RP11-15E1.1 chr9 66022661 66027719 - transcribed_processed_pseudogene KNOWN OTTHUMG00000188312.1 5059 2197 6 ENSG00000278068.1 RP11-15E1.6 chr9 66029264 66030169 + processed_pseudogene KNOWN OTTHUMG00000189068.1 906 906 1 ENSG00000278720.1 RP11-399F4.1 chr9 66042646 66043342 + processed_pseudogene KNOWN OTTHUMG00000188368.1 697 697 1 ENSG00000239216.1 RP4-712E4.2 chr1 119000618 119001405 - lincRNA NOVEL OTTHUMG00000012338.1 788 410 2 ENSG00000274628.3 FAM95B1 chr9 66047084 66055006 - processed_transcript NOVEL OTTHUMG00000188369.1 7923 7923 20 ENSG00000229146.2 SNX18P4 chr9 66082350 66083187 - processed_pseudogene KNOWN OTTHUMG00000188430.1 838 838 1 ENSG00000276257.1 RP11-327I22.3 chr9 66084804 66085031 + processed_pseudogene KNOWN OTTHUMG00000188431.1 228 228 1 ENSG00000276203.3 ANKRD20A3 chr9 66106815 66153135 - protein_coding KNOWN OTTHUMG00000188432.1 46321 7672 40 ENSG00000275030.1 U6 chr9 66142221 66142327 - snRNA NOVEL NA 107 107 1 ENSG00000278849.1 RP11-327I22.5 chr9 66159954 66179430 - lincRNA NOVEL OTTHUMG00000188450.1 19477 1484 8 ENSG00000233765.1 RP11-154P18.2 chr9 66253424 66254464 - unprocessed_pseudogene KNOWN OTTHUMG00000067362.1 1041 635 3 ENSG00000274181.1 RP11-120E5.1 chr9 66635754 66637197 + processed_pseudogene KNOWN OTTHUMG00000188564.2 1444 1444 1 ENSG00000276894.1 RP11-120E5.2 chr9 66641314 66642277 - processed_pseudogene KNOWN OTTHUMG00000188565.1 964 665 2 ENSG00000277297.1 ATP5A1P10 chr9 66721158 66722760 + processed_pseudogene KNOWN OTTHUMG00000188568.2 1603 1603 1 ENSG00000116874.10 WARS2 chr1 119031216 119140671 - protein_coding KNOWN OTTHUMG00000012335.3 109456 3847 24 ENSG00000273849.1 ATP5A1P10 chr9 66724584 66725064 + processed_pseudogene KNOWN OTTHUMG00000188567.2 481 481 1 ENSG00000276457.1 RP11-93P10.3 chr9 66744561 66745929 - processed_pseudogene KNOWN OTTHUMG00000188569.2 1369 1369 1 ENSG00000274349.3 ZNF658 chr9 66856426 66932141 + protein_coding KNOWN OTTHUMG00000188361.1 75716 4843 37 ENSG00000277490.1 RP11-1082I11.2 chr9 66879454 66879940 - processed_pseudogene KNOWN OTTHUMG00000188362.1 487 487 1 ENSG00000277350.1 RP11-395E19.6 chr9 66942703 66952344 + lincRNA NOVEL OTTHUMG00000188338.1 9642 1470 4 ENSG00000276039.1 RP11-395E19.5 chr9 66962271 66962348 + processed_pseudogene KNOWN OTTHUMG00000188339.1 78 78 1 ENSG00000274355.1 RP11-395E19.3 chr9 66976520 66976991 - transcribed_processed_pseudogene KNOWN OTTHUMG00000188258.1 472 472 1 ENSG00000276348.1 RP11-395E19.2 chr9 66979132 66988373 + lincRNA NOVEL OTTHUMG00000188259.1 9242 1988 2 ENSG00000274820.1 RP11-395E19.4 chr9 66979460 66979862 + unprocessed_pseudogene KNOWN OTTHUMG00000188333.1 403 403 1 ENSG00000275969.2 SPATA31A3 chr9 66986304 66992583 - protein_coding KNOWN OTTHUMG00000188260.2 6280 4256 4 ENSG00000224238.2 WARS2-IT1 chr1 119047405 119064785 + antisense NOVEL OTTHUMG00000012341.2 17381 2060 2 ENSG00000276386.1 RP11-203I2.1 chr9 67059560 67293468 + unprocessed_pseudogene KNOWN OTTHUMG00000188266.1 233909 3861 24 ENSG00000274852.1 Metazoa_SRP chr9 67175775 67176035 - misc_RNA NOVEL NA 261 261 1 ENSG00000277575.1 RP11-292B8.2 chr9 67203635 67208072 - processed_pseudogene KNOWN OTTHUMG00000188329.1 4438 944 4 ENSG00000273999.1 RP11-292B8.1 chr9 67211663 67213067 - processed_pseudogene KNOWN OTTHUMG00000188267.1 1405 1405 1 ENSG00000276204.1 RP11-203I2.2 chr9 67328207 67329404 - processed_pseudogene KNOWN OTTHUMG00000188268.1 1198 1198 1 ENSG00000276898.1 RP11-118H15.1 chr9 67512034 67515393 - lincRNA NOVEL OTTHUMG00000188580.2 3360 800 2 ENSG00000275904.1 Y_RNA chr9 67697076 67697187 + misc_RNA NOVEL NA 112 112 1 ENSG00000277208.1 RP11-12A20.11 chr9 67713910 67713967 + unprocessed_pseudogene KNOWN OTTHUMG00000188844.2 58 58 1 ENSG00000275614.1 RP11-12A20.12 chr9 67714723 67714914 + unprocessed_pseudogene KNOWN OTTHUMG00000188872.1 192 192 1 ENSG00000274026.1 FAM27E3 chr9 67717411 67719178 - transcribed_processed_pseudogene KNOWN OTTHUMG00000188582.3 1768 1593 3 ENSG00000116285.11 ERRFI1 chr1 8004404 8026308 - protein_coding KNOWN OTTHUMG00000001221.3 21905 4186 16 ENSG00000223575.2 RBMX2P3 chr1 119084998 119085954 - processed_pseudogene KNOWN OTTHUMG00000012340.2 957 957 1 ENSG00000278735.1 RP11-12A20.10 chr9 67718821 67719022 + unprocessed_pseudogene KNOWN OTTHUMG00000188583.1 202 202 1 ENSG00000274100.1 RP11-12A20.13 chr9 67721884 67722094 - unprocessed_pseudogene KNOWN OTTHUMG00000188873.1 211 211 1 ENSG00000278134.1 RP11-12A20.4 chr9 67722083 67722683 + unprocessed_pseudogene KNOWN OTTHUMG00000188584.2 601 601 1 ENSG00000276032.1 RP11-12A20.6 chr9 67723736 67724105 + unprocessed_pseudogene KNOWN OTTHUMG00000188585.2 370 370 1 ENSG00000278763.1 FAM27B chr9 67725690 67725902 - processed_pseudogene KNOWN OTTHUMG00000188586.2 213 213 1 ENSG00000274911.1 RP11-12A20.7 chr9 67725890 67726544 + unprocessed_pseudogene KNOWN OTTHUMG00000188587.2 655 655 1 ENSG00000274098.1 Metazoa_SRP chr9 67791499 67791782 - misc_RNA NOVEL NA 284 284 1 ENSG00000278010.1 SNORA70 chr9 67797087 67797181 + snoRNA NOVEL NA 95 95 1 ENSG00000277618.1 RP11-12A20.8 chr9 67797221 67797500 + processed_pseudogene KNOWN OTTHUMG00000188588.2 280 280 1 ENSG00000260691.4 ANKRD20A1 chr9 67859147 67902094 + protein_coding KNOWN OTTHUMG00000188594.2 42948 3887 42 ENSG00000236804.1 RPS3AP12 chr1 119126539 119127291 - processed_pseudogene KNOWN OTTHUMG00000012339.1 753 753 1 ENSG00000278551.1 U6 chr9 67869947 67870053 + snRNA NOVEL NA 107 107 1 ENSG00000274869.1 RP11-195B21.3 chr9 67901099 67920634 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000188593.5 19536 1216 5 ENSG00000226904.1 RP11-561O23.8 chr9 68228651 68229312 + antisense NOVEL OTTHUMG00000019963.1 662 340 2 ENSG00000196873.14 CBWD3 chr9 68232003 68300015 + protein_coding KNOWN OTTHUMG00000184383.3 68013 12319 223 ENSG00000279706.1 RP11-561O23.9 chr9 68250469 68251656 - TEC KNOWN OTTHUMG00000187221.1 1188 1188 1 ENSG00000187559.5 FOXD4L3 chr9 68302867 68304905 + protein_coding KNOWN OTTHUMG00000019959.2 2039 2039 1 ENSG00000234394.7 RP11-561O23.5 chr9 68306528 68330626 + lincRNA NOVEL OTTHUMG00000019961.4 24099 5282 17 ENSG00000225337.1 RP11-561O23.7 chr9 68307393 68308445 + lincRNA NOVEL OTTHUMG00000019960.1 1053 416 2 ENSG00000154330.11 PGM5 chr9 68328308 68531061 + protein_coding KNOWN OTTHUMG00000019966.3 202754 7426 48 ENSG00000224958.4 PGM5-AS1 chr9 68355189 68357852 - antisense NOVEL OTTHUMG00000019962.1 2664 604 5 ENSG00000231365.4 RP11-418J17.1 chr1 119140396 119275973 + antisense NOVEL OTTHUMG00000012342.1 135578 5462 24 ENSG00000233178.6 RP11-88I18.2 chr9 68393881 68406500 - antisense NOVEL OTTHUMG00000019964.4 12620 4007 18 ENSG00000229019.1 RP11-88I18.3 chr9 68426843 68429369 + sense_intronic NOVEL OTTHUMG00000019965.1 2527 905 2 ENSG00000181778.4 TMEM252 chr9 68536580 68540867 - protein_coding KNOWN OTTHUMG00000019967.1 4288 1245 2 ENSG00000226337.3 RP11-274B18.4 chr9 68541036 68644442 + lincRNA NOVEL OTTHUMG00000019970.2 103407 1739 5 ENSG00000234506.4 LINC01506 chr9 68543541 68546589 - lincRNA NOVEL OTTHUMG00000019968.1 3049 526 8 ENSG00000224025.2 RP11-274B18.3 chr9 68609125 68611984 + processed_pseudogene KNOWN OTTHUMG00000019969.2 2860 2860 1 ENSG00000107242.16 PIP5K1B chr9 68705414 69009176 + protein_coding KNOWN OTTHUMG00000019976.4 303763 4918 79 ENSG00000187866.7 FAM122A chr9 68780055 68784608 + protein_coding KNOWN OTTHUMG00000019971.1 4554 4554 1 ENSG00000236998.2 RP11-203L2.3 chr9 68788307 68789670 - processed_pseudogene KNOWN OTTHUMG00000019972.2 1364 1248 2 ENSG00000236733.1 RP11-203L2.4 chr9 68822403 68843275 - antisense NOVEL OTTHUMG00000019973.1 20873 516 3 ENSG00000227056.2 RPL6P2 chr1 119219314 119220096 - processed_pseudogene KNOWN OTTHUMG00000012344.3 783 783 1 ENSG00000207000.1 RNU6-820P chr9 68935873 68935979 - snRNA KNOWN NA 107 107 1 ENSG00000165059.6 PRKACG chr9 69012505 69014113 - protein_coding KNOWN OTTHUMG00000019974.1 1609 1609 1 ENSG00000165060.10 FXN chr9 69035259 69100178 + protein_coding KNOWN OTTHUMG00000019977.3 64920 2939 23 ENSG00000270236.1 RP11-265B8.5 chr9 69107926 69108217 - processed_pseudogene KNOWN OTTHUMG00000184634.1 292 292 1 ENSG00000119139.15 TJP2 chr9 69121264 69255208 + protein_coding KNOWN OTTHUMG00000019978.4 133945 7306 149 ENSG00000278910.2 BANCR chr9 69296682 69306977 - lincRNA KNOWN OTTHUMG00000189430.1 10296 600 6 ENSG00000135063.16 FAM189A2 chr9 69324572 69392455 + protein_coding KNOWN OTTHUMG00000019979.2 67884 4015 44 ENSG00000107282.6 APBA1 chr9 69427530 69672306 - protein_coding KNOWN OTTHUMG00000019984.3 244777 11384 17 ENSG00000243888.1 RP11-548B3.3 chr9 69428248 69428721 - 3prime_overlapping_ncrna NOVEL OTTHUMG00000019980.1 474 398 2 ENSG00000229312.2 RP11-470P21.2 chr9 69472466 69494513 + antisense NOVEL OTTHUMG00000019981.2 22048 442 3 ENSG00000227712.1 RP11-418J17.3 chr1 119260265 119327303 - lincRNA NOVEL OTTHUMG00000012411.1 67039 898 3 ENSG00000261447.1 RP11-109D9.4 chr9 69672749 69673713 + lincRNA NOVEL OTTHUMG00000175664.1 965 965 1 ENSG00000188647.11 PTAR1 chr9 69709522 69759959 - protein_coding KNOWN OTTHUMG00000019982.4 50438 12200 23 ENSG00000225626.2 C9orf135-AS1 chr9 69818983 69820739 - lincRNA NOVEL OTTHUMG00000019983.2 1757 1472 6 ENSG00000204711.7 C9orf135 chr9 69820793 69906232 + protein_coding KNOWN OTTHUMG00000019985.2 85440 1279 35 ENSG00000241174.3 RN7SL570P chr9 69884363 69884654 - misc_RNA KNOWN NA 292 292 1 ENSG00000204706.13 MAMDC2-AS1 chr9 70033921 70175888 - antisense NOVEL OTTHUMG00000019986.7 141968 9862 93 ENSG00000165072.9 MAMDC2 chr9 70043581 70226970 + protein_coding KNOWN OTTHUMG00000019990.1 183390 3854 16 ENSG00000222465.1 RNU2-5P chr9 70188571 70188750 - snRNA KNOWN NA 180 180 1 ENSG00000268364.1 SMC5-AS1 chr9 70193997 70258866 - antisense NOVEL OTTHUMG00000182521.1 64870 1818 4 ENSG00000236801.1 RPL24P8 chr9 70217195 70217668 + processed_pseudogene KNOWN OTTHUMG00000019989.1 474 474 1 ENSG00000232650.4 RP5-834N19.1 chr1 119328176 119356182 + lincRNA NOVEL OTTHUMG00000012409.1 28007 751 7 ENSG00000198887.8 SMC5 chr9 70258962 70354888 + protein_coding KNOWN OTTHUMG00000019992.2 95927 6637 38 ENSG00000274421.1 RP11-386J22.3 chr9 70310875 70312120 + sense_intronic NOVEL OTTHUMG00000188620.1 1246 1246 1 ENSG00000239180.1 Y_RNA chr9 70311607 70311701 - misc_RNA NOVEL NA 95 95 1 ENSG00000119138.4 KLF9 chr9 70384597 70414624 - protein_coding KNOWN OTTHUMG00000019991.2 30028 5175 2 ENSG00000083067.21 TRPM3 chr9 70529063 71446904 - protein_coding KNOWN OTTHUMG00000019997.10 917842 19912 280 ENSG00000272232.2 Metazoa_SRP chr9 70579163 70579461 - misc_RNA NOVEL NA 299 299 1 ENSG00000232086.1 RP11-141J10.1 chr9 70708047 70712863 + antisense NOVEL OTTHUMG00000019994.1 4817 337 2 ENSG00000223966.1 RP11-141J10.2 chr9 70726040 70730856 + antisense NOVEL OTTHUMG00000019995.1 4817 337 2 ENSG00000207935.2 MIR204 chr9 70809957 70810087 - miRNA KNOWN NA 131 131 1 ENSG00000224437.2 PIGUP1 chr9 70916997 70917501 - processed_pseudogene KNOWN OTTHUMG00000019996.2 505 505 1 ENSG00000194297.2 RNU1-75P chr1 119331397 119331525 - snRNA KNOWN NA 129 129 1 ENSG00000229814.1 RPL35AP21 chr9 71589601 71589933 + processed_pseudogene KNOWN OTTHUMG00000019999.2 333 333 1 ENSG00000135048.12 TMEM2 chr9 71683366 71816690 - protein_coding KNOWN OTTHUMG00000020000.2 133325 9625 105 ENSG00000271166.1 RP11-409O11.3 chr9 71804283 71804826 + processed_pseudogene KNOWN OTTHUMG00000184696.1 544 544 1 ENSG00000107362.12 ABHD17B chr9 71862452 71910931 - protein_coding KNOWN OTTHUMG00000020001.1 48480 2959 9 ENSG00000281760.1 AL138751.1 chr9 71897213 71897646 - protein_coding NOVEL NA 434 33 2 ENSG00000200922.1 Y_RNA chr9 71902455 71902550 - misc_RNA NOVEL NA 96 96 1 ENSG00000155621.13 C9orf85 chr9 71911510 71986054 + protein_coding KNOWN OTTHUMG00000020002.6 74545 4973 24 ENSG00000236060.2 HSPB1P1 chr9 72007881 72008136 - processed_pseudogene KNOWN OTTHUMG00000153719.1 256 256 1 ENSG00000204669.8 C9orf57 chr9 72051376 72072721 - protein_coding KNOWN OTTHUMG00000020003.1 21346 1563 9 ENSG00000224820.2 BTF3P4 chr9 72107818 72108312 - processed_pseudogene KNOWN OTTHUMG00000020004.2 495 495 1 ENSG00000116882.13 HAO2 chr1 119368779 119394130 + protein_coding KNOWN OTTHUMG00000012410.2 25352 1877 33 ENSG00000119125.15 GDA chr9 72114595 72257193 + protein_coding KNOWN OTTHUMG00000020005.4 142599 7904 109 ENSG00000235523.1 RP11-63P12.7 chr9 72257336 72257783 + lincRNA NOVEL OTTHUMG00000020009.1 448 361 2 ENSG00000233933.2 RP11-63P12.2 chr9 72275453 72275973 + processed_pseudogene KNOWN OTTHUMG00000020006.2 521 423 2 ENSG00000252428.1 RNA5SP285 chr9 72299720 72299838 - rRNA KNOWN NA 119 119 1 ENSG00000225434.2 LINC01504 chr9 72305430 72343210 + lincRNA NOVEL OTTHUMG00000020007.2 37781 2458 9 ENSG00000107372.11 ZFAND5 chr9 72351425 72365235 - protein_coding KNOWN OTTHUMG00000020008.3 13811 7053 43 ENSG00000230003.2 RP11-217F16.1 chr9 72445754 72445969 - processed_pseudogene KNOWN OTTHUMG00000020010.2 216 216 1 ENSG00000225947.1 RP11-313E4.1 chr9 72470374 72471076 + processed_pseudogene KNOWN OTTHUMG00000020011.1 703 392 2 ENSG00000165091.14 TMC1 chr9 72521801 72836351 + protein_coding KNOWN OTTHUMG00000020014.1 314551 4615 69 ENSG00000236862.1 RPS20P24 chr9 72655832 72656192 - processed_pseudogene KNOWN OTTHUMG00000020012.1 361 361 1 ENSG00000230921.1 HAO2-IT1 chr1 119368946 119370331 + sense_intronic NOVEL OTTHUMG00000012520.1 1386 311 2 ENSG00000229753.1 RP11-28P17.3 chr9 72741152 72741617 - processed_pseudogene KNOWN OTTHUMG00000020013.2 466 466 1 ENSG00000236849.4 LINC01474 chr9 72871728 72874109 - lincRNA NOVEL OTTHUMG00000020015.1 2382 639 12 ENSG00000165092.11 ALDH1A1 chr9 72900662 73080442 - protein_coding KNOWN OTTHUMG00000020019.1 179781 2849 50 ENSG00000228024.1 CYP1D1P chr9 73042745 73056528 + unprocessed_pseudogene KNOWN OTTHUMG00000020017.1 13784 1433 6 ENSG00000135046.12 ANXA1 chr9 73151757 73170393 + protein_coding KNOWN OTTHUMG00000020016.1 18637 4561 58 ENSG00000221110.1 AL449083.1 chr9 73291120 73291227 - miRNA NOVEL NA 108 108 1 ENSG00000221844.2 DPP3P2 chr9 73474378 73476073 - processed_pseudogene KNOWN OTTHUMG00000020020.3 1696 1696 1 ENSG00000232590.1 RP11-128I7.1 chr9 73573615 73579498 + lincRNA NOVEL OTTHUMG00000020021.1 5884 624 3 ENSG00000236701.3 RP11-549A6.1 chr9 73648828 73649839 + processed_pseudogene KNOWN OTTHUMG00000020022.2 1012 1012 1 ENSG00000212454.1 RNA5SP286 chr9 73750972 73751077 - rRNA KNOWN NA 106 106 1 ENSG00000203859.8 HSD3B2 chr1 119414931 119423035 + protein_coding KNOWN OTTHUMG00000012526.1 8105 2336 22 ENSG00000223368.2 RP11-401G5.1 chr9 73870896 73873297 - processed_pseudogene KNOWN OTTHUMG00000020023.2 2402 614 3 ENSG00000227809.1 RP11-171A24.2 chr9 74371531 74383530 + lincRNA NOVEL OTTHUMG00000020024.1 12000 648 3 ENSG00000224825.2 RORB-AS1 chr9 74485551 74499127 - antisense NOVEL OTTHUMG00000020025.2 13577 1178 3 ENSG00000198963.9 RORB chr9 74497365 74693177 + protein_coding KNOWN OTTHUMG00000020026.2 195813 9591 20 ENSG00000119121.20 TRPM6 chr9 74722495 74888094 - protein_coding KNOWN OTTHUMG00000020027.2 165600 9193 129 ENSG00000202217.1 RN7SKP47 chr9 74799895 74800222 + misc_RNA KNOWN NA 328 328 1 ENSG00000270954.1 RP11-174B4.2 chr9 74804473 74804773 + processed_pseudogene KNOWN OTTHUMG00000184697.1 301 301 1 ENSG00000281621.1 Y_RNA chr9 74847506 74847601 + misc_RNA NOVEL NA 96 96 1 ENSG00000252758.1 RNU6-445P chr9 74857675 74857781 + snRNA KNOWN NA 107 107 1 ENSG00000224297.2 RP11-197P3.1 chr9 74935176 74935696 + processed_pseudogene KNOWN OTTHUMG00000020028.2 521 521 1 ENSG00000238290.1 RP11-431K24.1 chr1 8026738 8122702 + lincRNA NOVEL OTTHUMG00000001766.1 95965 2044 3 ENSG00000232780.1 GAPDHP74 chr1 119434456 119435080 - processed_pseudogene KNOWN OTTHUMG00000012523.1 625 625 1 ENSG00000135045.6 C9orf40 chr9 74946581 74952886 - protein_coding KNOWN OTTHUMG00000020031.1 6306 2327 2 ENSG00000203321.2 C9orf41-AS1 chr9 74952968 74996293 + antisense NOVEL OTTHUMG00000020029.1 43326 719 5 ENSG00000156017.11 C9orf41 chr9 74981020 75028423 - protein_coding KNOWN OTTHUMG00000020032.2 47404 4610 15 ENSG00000229587.2 RP11-197P3.5 chr9 75009828 75016036 - sense_intronic NOVEL OTTHUMG00000020030.2 6209 670 2 ENSG00000278040.1 uc_338 chr9 75016681 75016848 - misc_RNA NOVEL NA 168 168 1 ENSG00000106733.19 NMRK1 chr9 75060573 75088217 - protein_coding KNOWN OTTHUMG00000020034.3 27645 3865 40 ENSG00000134996.11 OSTF1 chr9 75088543 75147265 + protein_coding KNOWN OTTHUMG00000020033.1 58723 1319 10 ENSG00000200041.1 Y_RNA chr9 75181520 75181621 - misc_RNA NOVEL NA 102 102 1 ENSG00000212316.1 RNU6-1228P chr9 75198071 75198177 + snRNA KNOWN NA 107 107 1 ENSG00000235707.2 RP11-323A7.1 chr9 75401889 75402992 - processed_pseudogene KNOWN OTTHUMG00000020035.2 1104 1104 1 ENSG00000203858.3 HSD3BP2 chr1 119439001 119446086 + unprocessed_pseudogene KNOWN OTTHUMG00000012521.1 7086 1118 3 ENSG00000236376.1 RP11-470F18.1 chr9 75579669 75588548 + lincRNA NOVEL OTTHUMG00000020036.1 8880 458 2 ENSG00000280790.1 AL157883.1 chr9 75723745 75723830 - miRNA NOVEL NA 86 86 1 ENSG00000234644.2 OTX2P1 chr9 75724222 75724575 - processed_pseudogene KNOWN OTTHUMG00000020037.2 354 354 1 ENSG00000099139.12 PCSK5 chr9 75890644 76362339 + protein_coding KNOWN OTTHUMG00000020039.2 471696 12705 107 ENSG00000238826.1 AL359253.1 chr9 75912453 75912549 + miRNA NOVEL NA 97 97 1 ENSG00000231137.1 RBM22P5 chr9 76286494 76288081 - processed_pseudogene KNOWN OTTHUMG00000020038.2 1588 1277 2 ENSG00000135002.10 RFK chr9 76385517 76394517 - protein_coding KNOWN OTTHUMG00000020040.2 9001 3877 22 ENSG00000234618.1 RPSAP9 chr9 76398699 76399586 + processed_pseudogene KNOWN OTTHUMG00000020041.1 888 888 1 ENSG00000187210.11 GCNT1 chr9 76419850 76507416 + protein_coding KNOWN OTTHUMG00000020044.1 87567 6463 17 ENSG00000233814.1 RP11-66C24.1 chr9 76419934 76420631 + processed_pseudogene KNOWN OTTHUMG00000020042.1 698 339 2 ENSG00000235595.1 GAPDHP23 chr1 119462029 119463021 - processed_pseudogene KNOWN OTTHUMG00000012524.1 993 993 1 ENSG00000219149.4 RP11-214N16.2 chr9 76549282 76549771 - processed_pseudogene KNOWN OTTHUMG00000020043.2 490 490 1 ENSG00000241781.2 AL161626.1 chr9 76571815 76571871 + miRNA NOVEL NA 57 57 1 ENSG00000106772.16 PRUNE2 chr9 76611376 76906087 - protein_coding KNOWN OTTHUMG00000020047.4 294712 14656 130 ENSG00000265488.1 AL359314.1 chr9 76666086 76666171 + miRNA NOVEL NA 86 86 1 ENSG00000225937.1 PCA3 chr9 76764436 76787569 + antisense KNOWN OTTHUMG00000020046.1 23134 3922 4 ENSG00000274326.1 PCA3_1 chr9 76779657 76779917 + misc_RNA NOVEL NA 261 261 1 ENSG00000277320.1 PCA3_2 chr9 76785782 76786190 + misc_RNA NOVEL NA 409 409 1 ENSG00000230335.1 DNAJB5P1 chr9 76931261 76932066 - processed_pseudogene KNOWN OTTHUMG00000020048.1 806 806 1 ENSG00000236604.1 LYPLA2P3 chr9 76970322 76971028 + processed_pseudogene KNOWN OTTHUMG00000020049.1 707 576 2 ENSG00000229857.1 RP11-159H20.3 chr9 76992099 76993108 + processed_pseudogene KNOWN OTTHUMG00000020050.1 1010 732 2 ENSG00000187481.2 HSD3BP1 chr1 119467221 119473803 + unprocessed_pseudogene KNOWN OTTHUMG00000012522.1 6583 1111 3 ENSG00000204612.1 FOXB2 chr9 77019655 77020953 + protein_coding KNOWN OTTHUMG00000020051.1 1299 1299 1 ENSG00000232851.3 ATP5J2P3 chr9 77040416 77040673 + processed_pseudogene KNOWN OTTHUMG00000020052.2 258 258 1 ENSG00000233526.1 RFC5P1 chr9 77072100 77073295 + processed_pseudogene KNOWN OTTHUMG00000020053.2 1196 874 2 ENSG00000232998.1 VPS13A-AS1 chr9 77176756 77177994 - antisense NOVEL OTTHUMG00000020054.1 1239 519 2 ENSG00000197969.10 VPS13A chr9 77177353 77421541 + protein_coding KNOWN OTTHUMG00000020055.5 244189 20196 338 ENSG00000156049.6 GNA14 chr9 77423079 77648307 - protein_coding KNOWN OTTHUMG00000020058.1 225229 2721 11 ENSG00000231373.1 GNA14-AS1 chr9 77456295 77526697 + antisense NOVEL OTTHUMG00000020056.1 70403 605 4 ENSG00000228248.1 NUTF2P3 chr9 77580245 77580628 + processed_pseudogene KNOWN OTTHUMG00000020057.2 384 384 1 ENSG00000201711.1 RNU6-1303P chr9 77635203 77635309 - snRNA KNOWN NA 107 107 1 ENSG00000156052.9 GNAQ chr9 77716087 78031458 - protein_coding KNOWN OTTHUMG00000020059.1 315372 6629 11 ENSG00000229570.2 GAPDHP58 chr1 119495836 119496841 - processed_pseudogene KNOWN OTTHUMG00000012527.2 1006 1006 1 ENSG00000233457.1 RP11-336N8.1 chr9 78150532 78151193 - processed_pseudogene KNOWN OTTHUMG00000020063.1 662 662 1 ENSG00000222452.1 RN7SKP59 chr9 78165465 78165778 + misc_RNA KNOWN NA 314 314 1 ENSG00000233947.1 RP11-336N8.2 chr9 78178263 78179512 + processed_pseudogene KNOWN OTTHUMG00000020064.1 1250 1250 1 ENSG00000228781.1 RP11-336N8.3 chr9 78180214 78180693 - processed_pseudogene KNOWN OTTHUMG00000020065.1 480 480 1 ENSG00000234819.1 RP11-336N8.4 chr9 78219120 78219357 + processed_pseudogene KNOWN OTTHUMG00000020061.1 238 238 1 ENSG00000148019.11 CEP78 chr9 78236062 78279690 + protein_coding KNOWN OTTHUMG00000020062.3 43629 14355 103 ENSG00000135069.12 PSAT1 chr9 78297143 78330093 + protein_coding KNOWN OTTHUMG00000020066.1 32951 2188 17 ENSG00000270627.1 RP11-216F5.1 chr9 78589158 78589539 + processed_pseudogene KNOWN OTTHUMG00000184700.1 382 382 1 ENSG00000237257.1 MTND2P8 chr9 78741720 78742744 - unprocessed_pseudogene KNOWN OTTHUMG00000020067.1 1025 1025 1 ENSG00000226234.2 KRT18P24 chr9 79036413 79037568 - processed_pseudogene KNOWN OTTHUMG00000020068.1 1156 1156 1 ENSG00000203857.8 HSD3B1 chr1 119507198 119515054 + protein_coding KNOWN OTTHUMG00000012525.3 7857 2443 15 ENSG00000260995.1 RP11-165H23.1 chr9 79135422 79145674 - lincRNA NOVEL OTTHUMG00000175501.1 10253 2432 5 ENSG00000186940.6 CHCHD2P9 chr9 79391304 79391759 + processed_pseudogene KNOWN OTTHUMG00000020069.2 456 456 1 ENSG00000233086.6 RP11-375O18.2 chr9 79505804 79532342 - lincRNA NOVEL OTTHUMG00000020070.4 26539 3830 9 ENSG00000106829.17 TLE4 chr9 79571773 79726882 + protein_coding KNOWN OTTHUMG00000020072.8 155110 8187 238 ENSG00000240979.1 RP11-79D8.2 chr9 79726069 79726321 + processed_pseudogene KNOWN OTTHUMG00000020071.1 253 253 1 ENSG00000270691.1 RP11-403N16.5 chr9 79850871 79851498 + processed_pseudogene KNOWN OTTHUMG00000184701.2 628 628 1 ENSG00000238002.2 NPAP1P6 chr9 79863019 79866875 + processed_pseudogene KNOWN OTTHUMG00000020073.2 3857 3484 2 ENSG00000232494.1 RP11-403N16.2 chr9 79874696 79886678 - lincRNA NOVEL OTTHUMG00000020074.1 11983 524 2 ENSG00000260564.1 RP11-403N16.3 chr9 79889001 79892007 + lincRNA NOVEL OTTHUMG00000175493.1 3007 3007 1 ENSG00000279715.1 RP11-403N16.4 chr9 79913269 79915736 + TEC KNOWN OTTHUMG00000175785.1 2468 2468 1 ENSG00000226443.3 GAPDHP32 chr1 119533749 119534746 - processed_pseudogene KNOWN OTTHUMG00000012954.1 998 998 1 ENSG00000280366.1 RP11-327L9.1 chr9 79975023 79990064 + lincRNA NOVEL OTTHUMG00000189229.1 15042 586 3 ENSG00000230945.1 LINC01507 chr9 80030579 80034555 + lincRNA NOVEL OTTHUMG00000020075.1 3977 446 2 ENSG00000236521.1 NPAP1P4 chr9 80357029 80360338 - processed_pseudogene KNOWN OTTHUMG00000020076.1 3310 3310 1 ENSG00000275603.1 AL390788.1 chr9 80396890 80396964 - miRNA NOVEL NA 75 75 1 ENSG00000232981.1 RP11-117O7.2 chr9 80563571 80564630 - unprocessed_pseudogene KNOWN OTTHUMG00000020078.1 1060 1060 1 ENSG00000225901.1 MTND2P9 chr9 80565032 80565962 - unprocessed_pseudogene KNOWN OTTHUMG00000020077.1 931 931 1 ENSG00000221581.1 AL353707.1 chr9 80734242 80734329 - miRNA NOVEL NA 88 88 1 ENSG00000234637.1 RPS19P6 chr9 80782338 80782770 - processed_pseudogene KNOWN OTTHUMG00000020079.2 433 433 1 ENSG00000226798.1 RP11-289F5.1 chr9 80869758 80871295 - lincRNA NOVEL OTTHUMG00000020080.1 1538 791 3 ENSG00000280565.1 AL354682.1 chr9 81009486 81009553 - miRNA NOVEL NA 68 68 1 ENSG00000249798.1 HSD3BP3 chr1 119538509 119545913 + unprocessed_pseudogene KNOWN OTTHUMG00000012955.1 7405 994 3 ENSG00000228375.1 RPS20P25 chr9 81410279 81410630 + processed_pseudogene KNOWN OTTHUMG00000020081.1 352 352 1 ENSG00000237072.1 RP11-232A1.2 chr9 81488308 81488837 + processed_pseudogene KNOWN OTTHUMG00000020082.1 530 530 1 ENSG00000196781.12 TLE1 chr9 81583683 81689305 - protein_coding KNOWN OTTHUMG00000021008.1 105623 4906 72 ENSG00000233926.1 RP11-154D17.1 chr9 81689713 81776900 + lincRNA NOVEL OTTHUMG00000020083.1 87188 1885 6 ENSG00000207206.1 RNU6-1035P chr9 81725243 81725349 - snRNA KNOWN NA 107 107 1 ENSG00000263404.1 AL158154.1 chr9 81805996 81806081 - miRNA NOVEL NA 86 86 1 ENSG00000252167.1 RNA5SP287 chr9 81885496 81885598 + rRNA KNOWN NA 103 103 1 ENSG00000278507.1 AL158154.2 chr9 81887673 81887764 + miRNA NOVEL NA 92 92 1 ENSG00000200969.1 SNORD95 chr9 81888918 81888985 + snoRNA NOVEL NA 68 68 1 ENSG00000240632.5 SPATA31D5P chr9 81913437 81919926 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000020087.2 6490 4863 8 ENSG00000239873.2 GAPDHP27 chr1 119558755 119559774 - processed_pseudogene KNOWN OTTHUMG00000012956.2 1020 1020 1 ENSG00000230846.1 RP11-383M4.2 chr9 81928021 81931368 - lincRNA NOVEL OTTHUMG00000020086.1 3348 465 2 ENSG00000189357.7 SPATA31D4 chr9 81928514 81934948 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000020088.2 6435 4787 8 ENSG00000267559.4 RP11-383M4.6 chr9 81930226 81977089 - lincRNA NOVEL OTTHUMG00000180903.1 46864 2208 9 ENSG00000186788.11 SPATA31D3 chr9 81943559 81950094 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000020084.2 6536 4868 8 ENSG00000237770.1 SPATA31D2P chr9 81968838 81972070 + processed_pseudogene KNOWN OTTHUMG00000020089.1 3233 3233 1 ENSG00000214929.3 SPATA31D1 chr9 81988772 81995256 + protein_coding KNOWN OTTHUMG00000169122.2 6485 5158 6 ENSG00000231649.3 SPATA31B1P chr9 82057647 82063682 - unprocessed_pseudogene KNOWN OTTHUMG00000020090.2 6036 4016 4 ENSG00000230360.1 DDX10P2 chr9 82086155 82088768 - processed_pseudogene KNOWN OTTHUMG00000020092.1 2614 2614 1 ENSG00000235377.1 RP11-388B24.4 chr9 82130752 82131632 + processed_pseudogene KNOWN OTTHUMG00000020093.2 881 881 1 ENSG00000228430.7 RP11-15B24.5 chr9 82272756 82564432 + lincRNA NOVEL OTTHUMG00000020098.4 291677 3858 101 ENSG00000203855.7 HSD3BP4 chr1 119564066 119572067 + unprocessed_pseudogene KNOWN OTTHUMG00000012957.1 8002 1120 3 ENSG00000225085.1 RP11-15B24.1 chr9 82405188 82406239 + lincRNA NOVEL OTTHUMG00000020094.1 1052 455 2 ENSG00000228046.2 RP11-15B24.2 chr9 82427350 82428025 - processed_pseudogene KNOWN OTTHUMG00000020095.2 676 676 1 ENSG00000228123.4 RP11-15B24.3 chr9 82431889 82432905 - processed_pseudogene KNOWN OTTHUMG00000020096.3 1017 1017 1 ENSG00000232749.2 RP11-15B24.4 chr9 82451656 82455225 + lincRNA NOVEL OTTHUMG00000020097.2 3570 673 4 ENSG00000278988.1 RP11-333B6.1 chr9 82543718 82544196 + TEC KNOWN OTTHUMG00000175665.1 479 479 1 ENSG00000275270.1 AL133391.1 chr9 82705777 82705844 + miRNA NOVEL NA 68 68 1 ENSG00000233309.1 RPS6P12 chr9 82744067 82744792 - processed_pseudogene KNOWN OTTHUMG00000020099.1 726 726 1 ENSG00000165105.9 RASEF chr9 82979585 83063177 - protein_coding KNOWN OTTHUMG00000020100.1 83593 6649 19 ENSG00000251776.1 RN7SKP242 chr9 83200940 83201228 - misc_RNA KNOWN NA 289 289 1 ENSG00000273806.1 RP11-439K3.4 chr9 83201957 83202065 + processed_pseudogene KNOWN OTTHUMG00000187813.1 109 109 1 ENSG00000232848.1 CTA-215D11.4 chr1 8057245 8058463 - processed_pseudogene KNOWN OTTHUMG00000001224.1 1219 800 2 ENSG00000240244.3 GAPDHP33 chr1 119596167 119597179 - processed_pseudogene KNOWN OTTHUMG00000012958.1 1013 1013 1 ENSG00000229109.1 RP11-439K3.1 chr9 83219331 83234242 + antisense NOVEL OTTHUMG00000020101.1 14912 444 3 ENSG00000172159.14 FRMD3 chr9 83242990 83538546 - protein_coding KNOWN OTTHUMG00000020103.3 295557 6486 64 ENSG00000251752.1 RNU4-29P chr9 83275941 83276114 + snRNA KNOWN NA 174 174 1 ENSG00000237529.1 RP11-439K3.3 chr9 83276376 83279499 + antisense NOVEL OTTHUMG00000020102.1 3124 527 2 ENSG00000199483.1 RNU4-15P chr9 83596444 83596584 - snRNA KNOWN NA 141 141 1 ENSG00000148057.14 IDNK chr9 83623049 83644130 + protein_coding KNOWN OTTHUMG00000020105.5 21082 1814 29 ENSG00000135018.12 UBQLN1 chr9 83659963 83708203 - protein_coding KNOWN OTTHUMG00000020104.2 48241 7117 41 ENSG00000254473.1 RP11-522I20.3 chr9 83707594 83713378 + antisense NOVEL OTTHUMG00000166241.2 5785 1134 4 ENSG00000165113.11 GKAP1 chr9 83739421 83829516 - protein_coding KNOWN OTTHUMG00000020106.2 90096 3381 47 ENSG00000226877.6 RP11-575L7.2 chr9 83829656 83837861 + antisense NOVEL OTTHUMG00000020108.2 8206 977 14 ENSG00000260941.1 LINC00622 chr1 119597702 119599271 - sense_overlapping NOVEL OTTHUMG00000176048.1 1570 1570 1 ENSG00000231616.7 RP11-575L7.4 chr9 83831586 83868532 + antisense NOVEL OTTHUMG00000020110.8 36947 3790 61 ENSG00000165115.13 KIF27 chr9 83836698 83921465 - protein_coding KNOWN OTTHUMG00000020109.3 84768 5140 60 ENSG00000165118.13 C9orf64 chr9 83938311 83956986 - protein_coding KNOWN OTTHUMG00000020111.2 18676 2729 12 ENSG00000165119.17 HNRNPK chr9 83968083 83980616 - protein_coding KNOWN OTTHUMG00000020107.3 12534 5114 110 ENSG00000207603.1 MIR7-1 chr9 83969748 83969857 - miRNA KNOWN NA 110 110 1 ENSG00000235298.1 RP11-575L7.8 chr9 83972233 83975777 + antisense NOVEL OTTHUMG00000020112.1 3545 390 2 ENSG00000178966.14 RMI1 chr9 83980711 84004074 + protein_coding KNOWN OTTHUMG00000020113.2 23364 3507 10 ENSG00000202523.1 Y_RNA chr9 83992932 83993033 + misc_RNA NOVEL NA 102 102 1 ENSG00000227463.2 RP11-158D2.2 chr9 84063443 84094577 + lincRNA NOVEL OTTHUMG00000020115.2 31135 2007 9 ENSG00000270166.1 RP11-158D2.1 chr9 84078584 84078857 + processed_pseudogene KNOWN OTTHUMG00000020114.2 274 274 1 ENSG00000198857.3 HSD3BP5 chr1 119601340 119609250 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000012961.1 7911 1132 3 ENSG00000197506.7 SLC28A3 chr9 84275457 84340683 - protein_coding KNOWN OTTHUMG00000020117.1 65227 5063 23 ENSG00000233262.1 RP11-380F14.2 chr9 84278219 84290131 + antisense NOVEL OTTHUMG00000020116.1 11913 373 2 ENSG00000228095.3 RP11-361M4.1 chr9 84604111 84604425 - processed_pseudogene KNOWN OTTHUMG00000020118.2 315 315 1 ENSG00000148053.14 NTRK2 chr9 84668551 85027070 + protein_coding KNOWN OTTHUMG00000020120.2 358520 20363 131 ENSG00000226590.1 UBE2V1P10 chr9 85159682 85159950 + processed_pseudogene KNOWN OTTHUMG00000020121.1 269 269 1 ENSG00000227412.1 STK33P1 chr9 85492579 85494094 + processed_pseudogene KNOWN OTTHUMG00000020122.1 1516 1218 2 ENSG00000135049.14 AGTPBP1 chr9 85546539 85742029 - protein_coding KNOWN OTTHUMG00000020124.3 195491 4939 128 ENSG00000216181.2 AL157882.1 chr9 85668963 85669039 - miRNA NOVEL NA 77 77 1 ENSG00000234424.2 RP11-213G2.1 chr9 85753306 85786575 + unprocessed_pseudogene KNOWN OTTHUMG00000020125.1 33270 1547 7 ENSG00000229454.1 RP11-202I11.2 chr9 85756042 85765112 - lincRNA NOVEL OTTHUMG00000020123.1 9071 429 3 ENSG00000143067.4 ZNF697 chr1 119619422 119647773 - protein_coding KNOWN OTTHUMG00000012962.3 28352 5041 3 ENSG00000230303.4 RP11-213G2.2 chr9 85785722 85793480 - lincRNA NOVEL OTTHUMG00000020126.1 7759 978 14 ENSG00000165121.10 RP11-213G2.3 chr9 85815966 85849511 + unprocessed_pseudogene KNOWN OTTHUMG00000020127.1 33546 1656 9 ENSG00000213711.3 PHBP7 chr9 85898903 85899716 + processed_pseudogene KNOWN OTTHUMG00000020128.2 814 814 1 ENSG00000231741.2 RP11-213G2.5 chr9 85934588 85936599 + processed_pseudogene KNOWN OTTHUMG00000020129.2 2012 1468 3 ENSG00000135040.14 NAA35 chr9 85941146 86022298 + protein_coding KNOWN OTTHUMG00000020131.2 81153 3641 42 ENSG00000135052.15 GOLM1 chr9 86026146 86100173 - protein_coding KNOWN OTTHUMG00000020130.3 74028 4233 46 ENSG00000233713.2 RP11-379P1.4 chr9 86132622 86132851 + processed_pseudogene KNOWN OTTHUMG00000020133.2 230 230 1 ENSG00000187753.11 C9orf153 chr9 86220265 86259657 - protein_coding KNOWN OTTHUMG00000020134.2 39393 1932 16 ENSG00000270688.1 RP11-507D14.4 chr9 86228815 86228983 + processed_pseudogene KNOWN OTTHUMG00000184702.1 169 169 1 ENSG00000223012.1 RN7SKP264 chr9 86258358 86258646 - misc_RNA KNOWN NA 289 289 1 ENSG00000092621.10 PHGDH chr1 119659798 119744215 + protein_coding KNOWN OTTHUMG00000012100.3 84418 5622 46 ENSG00000135070.12 ISCA1 chr9 86264546 86282538 - protein_coding KNOWN OTTHUMG00000020135.1 17993 3050 12 ENSG00000083223.16 ZCCHC6 chr9 86287733 86354454 - protein_coding KNOWN OTTHUMG00000020137.1 66722 6707 98 ENSG00000214908.3 RP11-229M1.2 chr9 86374966 86375706 - processed_pseudogene KNOWN OTTHUMG00000020136.1 741 741 1 ENSG00000235819.1 RP11-359J6.1 chr9 86414282 86414570 + lincRNA NOVEL OTTHUMG00000020138.1 289 197 2 ENSG00000222293.1 RNU2-36P chr9 86422938 86423128 - snRNA KNOWN NA 191 191 1 ENSG00000232211.1 RP11-395D3.1 chr9 86632147 86696496 + lincRNA NOVEL OTTHUMG00000020140.1 64350 530 3 ENSG00000180447.6 GAS1 chr9 86944363 86947189 - protein_coding KNOWN OTTHUMG00000020141.1 2827 2827 1 ENSG00000226237.1 RP11-276H19.1 chr9 86948699 87002033 + lincRNA NOVEL OTTHUMG00000020143.1 53335 4387 7 ENSG00000269994.1 RP11-276H19.2 chr9 87008455 87042126 - lincRNA NOVEL OTTHUMG00000020144.2 33672 2012 2 ENSG00000231007.5 CDC20P1 chr9 87011652 87013151 + processed_pseudogene KNOWN OTTHUMG00000020142.3 1500 1500 1 ENSG00000134240.10 HMGCS2 chr1 119747996 119768905 - protein_coding KNOWN OTTHUMG00000012101.3 20910 2571 26 ENSG00000224887.1 RP11-276H19.4 chr9 87084161 87085151 - processed_pseudogene KNOWN OTTHUMG00000020145.1 991 991 1 ENSG00000276743.1 AL513318.1 chr9 87113940 87114027 - miRNA NOVEL NA 88 88 1 ENSG00000204446.4 C9orf170 chr9 87148644 87159556 + lincRNA KNOWN OTTHUMG00000159587.1 10913 3239 2 ENSG00000212421.1 SNORA26 chr9 87260450 87260585 + snoRNA NOVEL NA 136 136 1 ENSG00000228373.2 RP11-497K15.1 chr9 87423634 87423893 + processed_pseudogene KNOWN OTTHUMG00000020146.2 260 260 1 ENSG00000196730.11 DAPK1 chr9 87497228 87708633 + protein_coding KNOWN OTTHUMG00000020150.4 211406 8907 224 ENSG00000219928.2 RP11-40C6.2 chr9 87525302 87525475 + processed_pseudogene KNOWN OTTHUMG00000020147.1 174 174 1 ENSG00000236709.1 DAPK1-IT1 chr9 87553454 87554459 + sense_intronic NOVEL OTTHUMG00000020148.1 1006 702 2 ENSG00000135047.13 CTSL chr9 87725519 87731393 + protein_coding KNOWN OTTHUMG00000020149.1 5875 2366 40 ENSG00000237747.1 RP11-65B23.3 chr9 87741233 87741953 + processed_pseudogene KNOWN OTTHUMG00000020151.1 721 721 1 ENSG00000134193.13 REG4 chr1 119794018 119811660 - protein_coding KNOWN OTTHUMG00000012175.2 17643 3493 20 ENSG00000222408.1 AL160279.1 chr9 87744901 87744993 - miRNA NOVEL NA 93 93 1 ENSG00000188029.7 CTSL3P chr9 87772453 87786884 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000020152.2 14432 1020 10 ENSG00000276478.1 RP11-65B23.5 chr9 87799501 87821803 - unprocessed_pseudogene KNOWN OTTHUMG00000187814.1 22303 745 4 ENSG00000237743.3 FBP2P1 chr9 87810642 87837225 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000020158.3 26584 530 6 ENSG00000232743.2 XXyac-YM21GA2.1 chr9 87816465 87817970 + processed_pseudogene KNOWN OTTHUMG00000020153.2 1506 1506 1 ENSG00000277357.1 NPAP1P7 chr9 87825146 87825968 + processed_pseudogene KNOWN OTTHUMG00000187817.1 823 823 1 ENSG00000234575.1 CTSLP8 chr9 87844152 87847314 + unprocessed_pseudogene KNOWN OTTHUMG00000020154.1 3163 967 7 ENSG00000233884.1 XXyac-YM21GA2.3 chr9 87848113 87853442 - antisense NOVEL OTTHUMG00000020155.1 5330 981 4 ENSG00000214888.2 XXyac-YM21GA2.7 chr9 87857015 87859399 - antisense NOVEL OTTHUMG00000168028.1 2385 2014 2 ENSG00000234460.1 XXyac-YM21GA2.4 chr9 87864166 87866290 + lincRNA NOVEL OTTHUMG00000020156.1 2125 452 2 ENSG00000215864.5 NBPF7 chr1 119834870 119844514 - unprocessed_pseudogene KNOWN OTTHUMG00000012178.3 9645 1326 9 ENSG00000177992.9 SPATA31E1 chr9 87882826 87888899 + protein_coding KNOWN OTTHUMG00000020157.2 6074 4478 4 ENSG00000230246.6 SPATA31C1 chr9 87914493 87923505 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000020160.2 9013 4657 11 ENSG00000238110.1 RP11-350E12.5 chr9 87944276 87945023 - processed_pseudogene KNOWN OTTHUMG00000020163.1 748 748 1 ENSG00000156345.16 CDK20 chr9 87966441 87974753 - protein_coding KNOWN OTTHUMG00000020161.4 8313 5727 55 ENSG00000271923.1 U6 chr9 87998229 87998335 - snRNA NOVEL NA 107 107 1 ENSG00000217716.3 RPS10P3 chr9 88016300 88016793 + processed_pseudogene KNOWN OTTHUMG00000020159.2 494 494 1 ENSG00000225385.3 RP11-350E12.4 chr9 88066915 88068037 + processed_pseudogene KNOWN OTTHUMG00000020162.3 1123 417 3 ENSG00000177910.7 SPATA31C2 chr9 88129458 88138446 - unprocessed_pseudogene KNOWN OTTHUMG00000020164.2 8989 3777 5 ENSG00000276535.1 RP11-345K9.3 chr9 88144851 88145850 - processed_pseudogene KNOWN OTTHUMG00000187819.1 1000 1000 1 ENSG00000279154.1 RP11-345K9.2 chr9 88177695 88178578 + TEC KNOWN OTTHUMG00000175496.1 884 884 1 ENSG00000227205.4 PFN1P9 chr1 119853316 119853748 + processed_pseudogene KNOWN OTTHUMG00000012179.2 433 433 1 ENSG00000204429.4 RP11-1E11.1 chr9 88180673 88181447 + processed_pseudogene KNOWN OTTHUMG00000020165.2 775 775 1 ENSG00000229288.1 RP11-1E11.2 chr9 88187735 88190202 - processed_pseudogene KNOWN OTTHUMG00000020166.1 2468 2090 3 ENSG00000226327.3 RP11-350G13.1 chr9 88324454 88325339 + processed_pseudogene KNOWN OTTHUMG00000020167.2 886 886 1 ENSG00000106723.15 SPIN1 chr9 88388419 88478694 + protein_coding KNOWN OTTHUMG00000020168.2 90276 4914 35 ENSG00000275017.1 RP11-317B17.4 chr9 88391362 88391832 - processed_pseudogene KNOWN OTTHUMG00000187821.1 471 471 1 ENSG00000227638.2 HNRNPA1P14 chr9 88410529 88411463 - processed_pseudogene KNOWN OTTHUMG00000020169.2 935 935 1 ENSG00000231804.1 RP11-317B17.3 chr9 88484852 88485325 - processed_pseudogene KNOWN OTTHUMG00000157213.2 474 474 1 ENSG00000130045.14 NXNL2 chr9 88535101 88584274 + protein_coding KNOWN OTTHUMG00000020170.5 49174 2442 12 ENSG00000228189.4 RP13-60M5.2 chr9 88627189 88652160 - lincRNA NOVEL OTTHUMG00000020171.2 24972 1244 6 ENSG00000265873.1 MIR4289 chr9 88745836 88745905 - miRNA KNOWN NA 70 70 1 ENSG00000226446.1 NOTCH2P1 chr1 119886304 119886927 + processed_pseudogene KNOWN OTTHUMG00000057603.1 624 624 1 ENSG00000225856.2 PCNPP2 chr9 88970887 88971341 - processed_pseudogene KNOWN OTTHUMG00000020174.2 455 455 1 ENSG00000228658.1 RP11-791O21.5 chr9 88971638 88976298 + lincRNA NOVEL OTTHUMG00000020176.1 4661 391 2 ENSG00000186354.9 C9orf47 chr9 88990863 88996140 + protein_coding KNOWN OTTHUMG00000020172.3 5278 5050 8 ENSG00000213694.3 S1PR3 chr9 88991447 89005010 + protein_coding KNOWN OTTHUMG00000020173.2 13564 8754 3 ENSG00000148082.8 SHC3 chr9 89005771 89178767 - protein_coding KNOWN OTTHUMG00000020179.2 172997 9929 15 ENSG00000224945.1 RP11-82L18.2 chr9 89088604 89109934 - sense_intronic NOVEL OTTHUMG00000020177.1 21331 1038 5 ENSG00000123975.4 CKS2 chr9 89311198 89316703 + protein_coding KNOWN OTTHUMG00000020180.1 5506 613 3 ENSG00000265112.1 MIR3153 chr9 89312225 89312306 + miRNA KNOWN NA 82 82 1 ENSG00000187742.13 SECISBP2 chr9 89318506 89359662 + protein_coding KNOWN OTTHUMG00000020182.4 41157 9813 76 ENSG00000187764.10 SEMA4D chr9 89360787 89498130 - protein_coding KNOWN OTTHUMG00000020185.8 137344 14160 211 ENSG00000237094.10 RP4-669L17.10 chr1 365389 501617 - lincRNA NOVEL OTTHUMG00000156968.6 136229 4792 48 ENSG00000229305.1 RP11-431K24.2 chr1 8189824 8192770 + processed_pseudogene KNOWN OTTHUMG00000001767.1 2947 1075 4 ENSG00000134249.6 ADAM30 chr1 119893533 119896495 - protein_coding KNOWN OTTHUMG00000189303.1 2963 2963 1 ENSG00000231799.2 RP13-93L13.2 chr9 89449558 89450754 + processed_pseudogene KNOWN OTTHUMG00000020186.2 1197 1197 1 ENSG00000225460.1 RP13-93L13.1 chr9 89472237 89472692 + processed_pseudogene KNOWN OTTHUMG00000020184.2 456 456 1 ENSG00000264913.1 AL590233.1 chr9 89497938 89498021 + miRNA NOVEL NA 84 84 1 ENSG00000130222.9 GADD45G chr9 89605013 89606555 + protein_coding KNOWN OTTHUMG00000020187.1 1543 1322 10 ENSG00000237372.2 UNQ6494 chr9 89639814 89719759 + lincRNA NOVEL OTTHUMG00000020188.3 79946 2430 8 ENSG00000226206.1 RP5-1050E16.2 chr9 89799695 89821753 + lincRNA NOVEL OTTHUMG00000067508.1 22059 916 3 ENSG00000236507.1 RP5-1050E16.1 chr9 89801727 89803061 - lincRNA NOVEL OTTHUMG00000067507.1 1335 928 2 ENSG00000237626.1 RP11-406A20.1 chr9 89978282 89987486 + lincRNA NOVEL OTTHUMG00000020189.1 9205 457 2 ENSG00000227555.1 RP11-406A20.4 chr9 90020654 90041499 - lincRNA NOVEL OTTHUMG00000020191.1 20846 2720 4 ENSG00000263967.1 MIR4290 chr9 90023441 90023535 - miRNA KNOWN NA 95 95 1 ENSG00000261662.1 RP5-1042I8.7 chr1 119909255 119910613 - sense_overlapping NOVEL OTTHUMG00000176049.1 1359 1359 1 ENSG00000234910.2 IL6RP1 chr9 90081297 90082569 - processed_pseudogene KNOWN OTTHUMG00000020190.2 1273 1273 1 ENSG00000278382.1 RP11-406A20.5 chr9 90108244 90108518 + processed_pseudogene KNOWN OTTHUMG00000187824.1 275 275 1 ENSG00000279503.1 RP11-30P16.1 chr9 90158028 90158646 + TEC KNOWN OTTHUMG00000175611.1 619 619 1 ENSG00000185074.7 OR7E31P chr9 90216039 90216924 + unprocessed_pseudogene KNOWN OTTHUMG00000020192.2 886 886 1 ENSG00000225072.1 OR7E116P chr9 90232185 90233141 + unprocessed_pseudogene KNOWN OTTHUMG00000020193.1 957 957 1 ENSG00000231107.1 LINC01508 chr9 90300902 90433505 - lincRNA NOVEL OTTHUMG00000020194.1 132604 1597 6 ENSG00000229613.1 LINC01501 chr9 90463524 90582744 - lincRNA NOVEL OTTHUMG00000020197.1 119221 1180 10 ENSG00000165023.5 DIRAS2 chr9 90609832 90643104 - protein_coding KNOWN OTTHUMG00000020196.1 33273 4385 2 ENSG00000236316.2 OR7E109P chr9 90742526 90743380 - unprocessed_pseudogene KNOWN OTTHUMG00000020198.1 855 855 1 ENSG00000270432.1 OR7E108P chr9 90751240 90752230 - unprocessed_pseudogene KNOWN OTTHUMG00000184640.1 991 991 1 ENSG00000134250.16 NOTCH2 chr1 119911553 120069626 - protein_coding KNOWN OTTHUMG00000012177.4 158074 16804 82 ENSG00000165025.13 SYK chr9 90801787 90898549 + protein_coding KNOWN OTTHUMG00000020200.1 96763 5210 56 ENSG00000228216.1 RP11-367F23.1 chr9 90957260 90965393 - lincRNA NOVEL OTTHUMG00000020201.1 8134 295 2 ENSG00000260454.1 RP11-367F23.2 chr9 90997054 91001871 + lincRNA NOVEL OTTHUMG00000175788.1 4818 1395 3 ENSG00000230537.1 RP11-305L7.1 chr9 91104957 91107304 - lincRNA NOVEL OTTHUMG00000020202.1 2348 815 3 ENSG00000229694.5 RP11-305L7.6 chr9 91119062 91182762 + lincRNA NOVEL OTTHUMG00000020205.2 63701 984 11 ENSG00000237422.1 RP11-305L7.3 chr9 91119138 91163087 - lincRNA NOVEL OTTHUMG00000020204.1 43950 506 2 ENSG00000235641.4 LINC00484 chr9 91159573 91165658 + lincRNA KNOWN OTTHUMG00000020203.4 6086 3697 7 ENSG00000230147.2 RP11-305L7.5 chr9 91169585 91170045 - processed_pseudogene KNOWN OTTHUMG00000020206.2 461 461 1 ENSG00000273381.1 RP11-305L7.7 chr9 91206175 91210299 - lincRNA NOVEL OTTHUMG00000186454.1 4125 4125 1 ENSG00000148090.10 AUH chr9 91213815 91361913 - protein_coding KNOWN OTTHUMG00000020207.1 148099 2258 31 ENSG00000273406.1 RP11-114O18.1 chr1 120076616 120077091 + lincRNA NOVEL OTTHUMG00000186400.1 476 476 1 ENSG00000165030.3 NFIL3 chr9 91409045 91423862 - protein_coding KNOWN OTTHUMG00000020209.2 14818 2085 2 ENSG00000233081.1 RP11-440G5.2 chr9 91426238 91427144 + lincRNA NOVEL OTTHUMG00000020208.1 907 474 2 ENSG00000169071.13 ROR2 chr9 91563091 91950162 - protein_coding KNOWN OTTHUMG00000020211.4 387072 5818 49 ENSG00000228595.1 PAICSP2 chr9 91611343 91612492 + processed_pseudogene KNOWN OTTHUMG00000020210.1 1150 1150 1 ENSG00000266855.1 MIR3910-1 chr9 91636251 91636361 + miRNA KNOWN NA 111 111 1 ENSG00000227399.1 RP11-118F2.2 chr9 92006062 92006544 + processed_pseudogene KNOWN OTTHUMG00000020212.1 483 483 1 ENSG00000237306.1 HSPE1P22 chr9 92027498 92027824 + processed_pseudogene KNOWN OTTHUMG00000020213.1 327 327 1 ENSG00000090054.12 SPTLC1 chr9 92031999 92115384 - protein_coding KNOWN OTTHUMG00000021047.1 83386 3658 43 ENSG00000275756.1 RP11-100G15.12 chr9 92104425 92105451 + processed_pseudogene KNOWN OTTHUMG00000187825.1 1027 1027 1 ENSG00000232179.1 RP11-100G15.2 chr9 92108858 92108989 + unprocessed_pseudogene KNOWN OTTHUMG00000021035.1 132 132 1 ENSG00000207149.1 RNU6-465P chr1 120126974 120127074 + snRNA KNOWN NA 101 101 1 ENSG00000228069.1 RP11-100G15.3 chr9 92109013 92110095 + unprocessed_pseudogene KNOWN OTTHUMG00000020215.1 1083 779 2 ENSG00000238288.1 RP11-100G15.4 chr9 92110168 92110514 + unprocessed_pseudogene KNOWN OTTHUMG00000021038.1 347 347 1 ENSG00000240791.1 RP11-100G15.5 chr9 92110575 92110868 + unprocessed_pseudogene KNOWN OTTHUMG00000020217.1 294 294 1 ENSG00000227321.2 MTND4P15 chr9 92110865 92111897 + unprocessed_pseudogene KNOWN OTTHUMG00000020218.1 1033 1033 1 ENSG00000234537.1 RP11-100G15.7 chr9 92132398 92138629 + unprocessed_pseudogene KNOWN OTTHUMG00000021040.1 6232 1863 16 ENSG00000225511.5 LINC00475 chr9 92141298 92160114 + lincRNA KNOWN OTTHUMG00000020216.2 18817 3858 25 ENSG00000236717.2 RP11-100G15.10 chr9 92150382 92157445 - lincRNA NOVEL OTTHUMG00000020214.2 7064 210 2 ENSG00000224809.2 BEND3P2 chr9 92171241 92173494 + processed_pseudogene KNOWN OTTHUMG00000020220.2 2254 2254 1 ENSG00000276717.1 RP11-62C3.10 chr9 92177235 92188652 - unprocessed_pseudogene KNOWN OTTHUMG00000187827.1 11418 505 3 ENSG00000236115.1 RP11-62C3.6 chr9 92205356 92210158 + antisense NOVEL OTTHUMG00000020222.1 4803 333 3 ENSG00000265808.3 SEC22B chr1 120150898 120176515 - protein_coding KNOWN OTTHUMG00000185008.3 25618 9034 7 ENSG00000196305.16 IARS chr9 92210207 92293756 - protein_coding KNOWN OTTHUMG00000020219.2 83550 7401 174 ENSG00000279007.1 FKSG56 chr9 92227001 92227375 + protein_coding KNOWN NA 375 375 1 ENSG00000281156.1 MIR3651 chr9 92292458 92292547 - miRNA KNOWN NA 90 90 1 ENSG00000239183.1 SNORA84 chr9 92292461 92292593 - snoRNA KNOWN NA 133 133 1 ENSG00000198000.10 NOL8 chr9 92297358 92325636 - protein_coding KNOWN OTTHUMG00000020221.5 28279 8056 270 ENSG00000188312.12 CENPP chr9 92325484 92620533 + protein_coding KNOWN OTTHUMG00000020228.1 295050 9794 20 ENSG00000229530.1 RP11-62C3.8 chr9 92339658 92341663 - processed_pseudogene KNOWN OTTHUMG00000020223.1 2006 913 2 ENSG00000106809.9 OGN chr9 92383967 92404696 - protein_coding KNOWN OTTHUMG00000020224.3 20730 3321 21 ENSG00000127083.7 OMD chr9 92414245 92424461 - protein_coding KNOWN OTTHUMG00000020225.1 10217 2449 3 ENSG00000106819.10 ASPN chr9 92456205 92482506 - protein_coding KNOWN OTTHUMG00000020227.1 26302 2470 14 ENSG00000274642.1 CH17-472G23.1 chr1 120197085 120319680 + unprocessed_pseudogene KNOWN OTTHUMG00000185010.1 122596 853 6 ENSG00000106823.11 ECM2 chr9 92493554 92536655 - protein_coding KNOWN OTTHUMG00000020226.1 43102 4916 27 ENSG00000264158.1 MIR4670 chr9 92527984 92528058 - miRNA KNOWN NA 75 75 1 ENSG00000225551.1 RP11-19J3.5 chr9 92539053 92539184 - unprocessed_pseudogene KNOWN OTTHUMG00000020229.1 132 132 1 ENSG00000127080.8 IPPK chr9 92613184 92670265 - protein_coding KNOWN OTTHUMG00000020231.1 57082 5166 20 ENSG00000213669.2 RP11-476B13.2 chr9 92676943 92677407 - processed_pseudogene KNOWN OTTHUMG00000020230.1 465 465 1 ENSG00000185963.12 BICD2 chr9 92711363 92764812 - protein_coding KNOWN OTTHUMG00000021036.1 53450 6427 15 ENSG00000187984.11 ANKRD19P chr9 92809388 92888693 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000020237.3 79306 2947 43 ENSG00000252772.1 RNU6-714P chr9 92820977 92821079 + snRNA KNOWN NA 103 103 1 ENSG00000226721.2 EEF1DP2 chr9 92836826 92837668 - processed_pseudogene KNOWN OTTHUMG00000020238.2 843 843 1 ENSG00000275318.1 RP11-526D8.11 chr9 92840955 92841688 - unprocessed_pseudogene KNOWN OTTHUMG00000187829.1 734 734 1 ENSG00000277313.1 7SK chr1 120228046 120228295 - misc_RNA NOVEL NA 250 250 1 ENSG00000127081.12 ZNF484 chr9 92845031 92878038 - protein_coding KNOWN OTTHUMG00000020236.3 33008 4031 19 ENSG00000226668.4 RP11-526D8.7 chr9 92882567 92899608 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000020234.2 17042 4835 17 ENSG00000232843.2 SNX18P2 chr9 92893698 92894505 - processed_pseudogene KNOWN OTTHUMG00000020235.2 808 808 1 ENSG00000188101.5 ALOX15P2 chr9 92913156 92921560 + unprocessed_pseudogene KNOWN OTTHUMG00000020239.1 8405 1897 13 ENSG00000127084.16 FGD3 chr9 92947451 93036236 + protein_coding KNOWN OTTHUMG00000021032.5 88786 5890 82 ENSG00000157303.9 SUSD3 chr9 93058688 93085138 + protein_coding KNOWN OTTHUMG00000020241.2 26451 1263 20 ENSG00000223446.1 RP11-274J16.5 chr9 93094939 93095529 - antisense NOVEL OTTHUMG00000020240.1 591 238 2 ENSG00000165233.16 C9orf89 chr9 93096218 93113283 + protein_coding KNOWN OTTHUMG00000020243.3 17066 3081 36 ENSG00000131669.8 NINJ1 chr9 93121489 93134288 - protein_coding KNOWN OTTHUMG00000020242.2 12800 2648 17 ENSG00000203364.2 RP11-370F5.4 chr9 93147040 93148556 + lincRNA NOVEL OTTHUMG00000020244.1 1517 410 3 ENSG00000223804.4 CH17-472G23.2 chr1 120267334 120341871 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000185011.1 74538 1107 11 ENSG00000165238.15 WNK2 chr9 93184916 93320572 + protein_coding KNOWN OTTHUMG00000020247.3 135657 13198 193 ENSG00000204352.2 C9orf129 chr9 93318199 93346414 - protein_coding KNOWN OTTHUMG00000020248.1 28216 1154 5 ENSG00000200570.1 RNU6-829P chr9 93375556 93375667 + snRNA KNOWN NA 112 112 1 ENSG00000201074.1 Y_RNA chr9 93417855 93417966 + misc_RNA NOVEL NA 112 112 1 ENSG00000237385.1 RP11-165J3.5 chr9 93430342 93431299 - antisense NOVEL OTTHUMG00000020245.1 958 641 2 ENSG00000227603.1 RP11-165J3.6 chr9 93435332 93437121 - antisense NOVEL OTTHUMG00000020246.1 1790 691 2 ENSG00000188938.14 FAM120AOS chr9 93446494 93453592 - protein_coding KNOWN OTTHUMG00000020251.4 7099 3717 37 ENSG00000048828.15 FAM120A chr9 93451722 93566107 + protein_coding KNOWN OTTHUMG00000020252.2 114386 7204 48 ENSG00000197724.9 PHF2 chr9 93576407 93679587 + protein_coding KNOWN OTTHUMG00000020253.2 103181 5569 39 ENSG00000265347.1 MIR4291 chr9 93819357 93819421 + miRNA KNOWN NA 65 65 1 ENSG00000273727.1 U1 chr1 120354987 120355148 + snRNA NOVEL NA 162 162 1 ENSG00000231990.1 RP11-53B5.1 chr9 93857083 93858333 + lincRNA NOVEL OTTHUMG00000020254.1 1251 391 2 ENSG00000131668.12 BARX1 chr9 93951622 93955372 - protein_coding KNOWN OTTHUMG00000020255.5 3751 1777 7 ENSG00000235601.1 BARX1-AS1 chr9 93955597 93959140 + lincRNA NOVEL OTTHUMG00000020256.1 3544 1704 5 ENSG00000158079.13 PTPDC1 chr9 94030794 94109856 + protein_coding KNOWN OTTHUMG00000020258.2 79063 6342 31 ENSG00000227666.1 CYCSP24 chr9 94038030 94038345 + processed_pseudogene KNOWN OTTHUMG00000020257.1 316 316 1 ENSG00000269946.1 RP11-2B6.3 chr9 94166289 94200627 + lincRNA NOVEL OTTHUMG00000184012.1 34339 235 2 ENSG00000199165.2 MIRLET7A1 chr9 94175952 94176043 + miRNA KNOWN NA 92 92 1 ENSG00000199072.2 MIRLET7F1 chr9 94176333 94176442 + miRNA KNOWN NA 110 110 1 ENSG00000269929.1 RP11-2B6.2 chr9 94176458 94177892 + lincRNA NOVEL OTTHUMG00000183960.1 1435 1435 1 ENSG00000230262.5 MIRLET7DHG chr9 94176602 94204568 - lincRNA KNOWN OTTHUMG00000020259.3 27967 1319 7 ENSG00000200975.1 RNU1-7P chr1 8206434 8206597 - snRNA KNOWN NA 164 164 1 ENSG00000270392.2 PFN1P2 chr1 120432204 120434052 - transcribed_processed_pseudogene KNOWN OTTHUMG00000185012.1 1849 1849 2 ENSG00000199133.2 MIRLET7D chr9 94178826 94178930 + miRNA KNOWN NA 105 105 1 ENSG00000175787.15 ZNF169 chr9 94259311 94301454 + protein_coding KNOWN OTTHUMG00000020264.3 42144 5286 20 ENSG00000237679.2 VDAC1P11 chr9 94287699 94288550 - processed_pseudogene KNOWN OTTHUMG00000020261.2 852 852 1 ENSG00000130950.12 NUTM2F chr9 94318196 94328644 - protein_coding KNOWN OTTHUMG00000020260.4 10449 2561 15 ENSG00000232063.1 RP11-307E17.8 chr9 94332476 94360948 + lincRNA NOVEL OTTHUMG00000020262.1 28473 2162 3 ENSG00000224815.3 RP11-307E17.9 chr9 94338347 94338733 - processed_pseudogene KNOWN OTTHUMG00000020263.3 387 387 1 ENSG00000148110.14 HIATL1 chr9 94374551 94461042 + protein_coding KNOWN OTTHUMG00000020265.1 86492 3428 19 ENSG00000278486.1 RP11-533K9.4 chr9 94432631 94433273 - processed_pseudogene KNOWN OTTHUMG00000187831.1 643 643 1 ENSG00000224245.1 RP11-533K9.3 chr9 94496275 94512879 + unprocessed_pseudogene KNOWN OTTHUMG00000020267.1 16605 501 5 ENSG00000202445.1 RNU6-669P chr9 94507738 94507844 + snRNA KNOWN NA 107 107 1 ENSG00000270231.3 NBPF8P chr1 120436353 120467739 + unprocessed_pseudogene KNOWN OTTHUMG00000185013.1 31387 5330 25 ENSG00000231806.2 PCAT7 chr9 94555069 94568127 + antisense NOVEL OTTHUMG00000020270.2 13059 1164 3 ENSG00000130957.4 FBP2 chr9 94558720 94593793 - protein_coding KNOWN OTTHUMG00000020269.1 35074 1305 7 ENSG00000165140.8 FBP1 chr9 94603133 94640249 - protein_coding KNOWN OTTHUMG00000020268.1 37117 1668 20 ENSG00000148120.13 C9orf3 chr9 94726701 95087218 + protein_coding KNOWN OTTHUMG00000020276.4 360518 10742 157 ENSG00000252153.1 MIR2278 chr9 94809962 94810057 + miRNA KNOWN NA 96 96 1 ENSG00000230815.1 RP11-49O14.3 chr9 94824272 94824773 + sense_intronic NOVEL OTTHUMG00000020272.1 502 424 2 ENSG00000236095.1 RP11-49O14.2 chr9 94900429 94904754 + sense_intronic NOVEL OTTHUMG00000020273.1 4326 779 3 ENSG00000224764.1 RP11-54O15.3 chr9 94928551 94934946 - antisense NOVEL OTTHUMG00000020274.1 6396 487 2 ENSG00000274115.1 MIR6081 chr9 95065350 95065446 + miRNA KNOWN NA 97 97 1 ENSG00000207563.1 MIR23B chr9 95085208 95085304 + miRNA KNOWN NA 97 97 1 ENSG00000275131.1 CH17-472G23.4 chr1 120489625 120579190 - unprocessed_pseudogene KNOWN OTTHUMG00000185014.1 89566 6524 38 ENSG00000207864.2 MIR27B chr9 95085435 95085542 + miRNA KNOWN NA 108 108 1 ENSG00000207617.3 MIR3074 chr9 95086012 95086096 - miRNA KNOWN NA 85 85 1 ENSG00000158169.10 FANCC chr9 95099054 95317709 - protein_coding KNOWN OTTHUMG00000020279.3 218656 7912 83 ENSG00000229065.1 RP11-80I15.4 chr9 95113708 95114461 + antisense NOVEL OTTHUMG00000020277.1 754 529 2 ENSG00000223849.1 RP11-80I15.1 chr9 95123521 95123868 + processed_pseudogene KNOWN OTTHUMG00000020275.1 348 348 1 ENSG00000251884.1 RNA5SP288 chr9 95142449 95142541 - rRNA KNOWN NA 93 93 1 ENSG00000230221.2 RP11-173G21.1 chr9 95292338 95294810 + processed_pseudogene KNOWN OTTHUMG00000020278.2 2473 2473 1 ENSG00000271384.1 RP11-435O5.7 chr9 95406990 95407662 - lincRNA NOVEL OTTHUMG00000185269.1 673 673 1 ENSG00000213761.4 MT1P1 chr9 95413267 95413449 - processed_pseudogene KNOWN OTTHUMG00000020282.4 183 183 1 ENSG00000237857.2 RP11-435O5.2 chr9 95414834 95426796 - lincRNA NOVEL OTTHUMG00000020281.2 11963 1404 2 ENSG00000275509.1 AC241952.1 chr1 120515119 120515184 + miRNA NOVEL NA 66 66 1 ENSG00000185920.14 PTCH1 chr9 95442980 95517057 - protein_coding KNOWN OTTHUMG00000020280.4 74078 16591 272 ENSG00000271314.1 RP11-435O5.6 chr9 95494924 95495379 + antisense NOVEL OTTHUMG00000185270.1 456 456 1 ENSG00000271155.1 RP11-435O5.5 chr9 95506235 95507636 + antisense NOVEL OTTHUMG00000185271.1 1402 1402 1 ENSG00000271659.1 RP11-435O5.4 chr9 95514045 95514520 + antisense NOVEL OTTHUMG00000185272.1 476 476 1 ENSG00000229345.1 RP11-332M4.1 chr9 95599545 95606286 - lincRNA NOVEL OTTHUMG00000020283.1 6742 395 3 ENSG00000228142.2 RP11-180I4.2 chr9 95650154 95715718 + lincRNA NOVEL OTTHUMG00000020285.2 65565 512 5 ENSG00000227358.1 RP11-180I4.1 chr9 95652912 95653266 + processed_pseudogene KNOWN OTTHUMG00000020284.1 355 355 1 ENSG00000175611.10 LINC00476 chr9 95759231 95875977 - processed_transcript NOVEL OTTHUMG00000020286.2 116747 5100 18 ENSG00000268926.2 RP11-180I4.4 chr9 95772323 95774734 + lincRNA NOVEL OTTHUMG00000187223.1 2412 2412 1 ENSG00000252847.1 RNU2-46P chr9 95859904 95860016 + snRNA KNOWN NA 113 113 1 ENSG00000273694.1 U2 chr1 120571120 120571264 + snRNA NOVEL NA 145 145 1 ENSG00000182150.14 ERCC6L2 chr9 95875701 96014571 + protein_coding KNOWN OTTHUMG00000020289.6 138871 10352 69 ENSG00000199202.1 RNA5SP289 chr9 95905005 95905141 + rRNA KNOWN NA 137 137 1 ENSG00000237631.2 RP11-72B4.2 chr9 95918136 95918704 + processed_pseudogene KNOWN OTTHUMG00000020287.2 569 569 1 ENSG00000225194.2 LINC00092 chr9 96019732 96027965 - lincRNA KNOWN OTTHUMG00000020288.2 8234 2306 6 ENSG00000237212.1 RP11-569G13.2 chr9 96095211 96101912 + lincRNA NOVEL OTTHUMG00000020291.1 6702 1577 6 ENSG00000201938.1 Y_RNA chr9 96103079 96103174 - misc_RNA NOVEL NA 96 96 1 ENSG00000275465.3 RP11-569G13.3 chr9 96106661 96116411 - protein_coding NOVEL OTTHUMG00000189252.1 9751 2662 6 ENSG00000224546.2 EIF4BP3 chr9 96146007 96147856 + processed_pseudogene KNOWN OTTHUMG00000020290.2 1850 1850 1 ENSG00000130948.8 HSD17B3 chr9 96235306 96302152 - protein_coding KNOWN OTTHUMG00000020292.1 66847 2056 45 ENSG00000265367.1 AL160269.1 chr9 96235823 96235922 - miRNA NOVEL NA 100 100 1 ENSG00000275933.1 7SK chr1 120670127 120670376 + misc_RNA NOVEL NA 250 250 1 ENSG00000232283.1 RP11-240L7.4 chr9 96246462 96250393 + antisense NOVEL OTTHUMG00000020294.1 3932 1072 3 ENSG00000207276.1 RNU6-1160P chr9 96256216 96256319 - snRNA KNOWN NA 104 104 1 ENSG00000130958.10 SLC35D2 chr9 96320706 96383710 - protein_coding KNOWN OTTHUMG00000020293.1 63005 2203 37 ENSG00000165244.6 ZNF367 chr9 96385941 96418329 - protein_coding KNOWN OTTHUMG00000020295.1 32389 3646 5 ENSG00000238251.2 RP11-172F4.2 chr9 96407284 96407797 + processed_pseudogene KNOWN OTTHUMG00000020296.2 514 514 1 ENSG00000130956.12 HABP4 chr9 96450201 96491336 + protein_coding KNOWN OTTHUMG00000020298.1 41136 4056 16 ENSG00000081377.15 CDC14B chr9 96490241 96619830 - protein_coding KNOWN OTTHUMG00000020300.4 129590 10462 126 ENSG00000158122.10 AAED1 chr9 96639577 96655303 - protein_coding KNOWN OTTHUMG00000020299.1 15727 3084 20 ENSG00000224848.1 RP11-535M15.1 chr9 96687056 96721121 + lincRNA NOVEL OTTHUMG00000020301.1 34066 425 2 ENSG00000233820.2 RP11-535M15.2 chr9 96725890 96727469 + transcribed_processed_pseudogene KNOWN OTTHUMG00000020302.2 1580 1488 3 ENSG00000278882.1 AC253572.1 chr1 120723923 120793877 + protein_coding KNOWN NA 69955 1133 6 ENSG00000280644.1 AL589843.1 chr9 96729014 96729155 + miRNA NOVEL NA 142 142 1 ENSG00000081386.11 ZNF510 chr9 96755865 96778129 - protein_coding KNOWN OTTHUMG00000020303.1 22265 5921 19 ENSG00000196597.10 ZNF782 chr9 96816472 96875623 - protein_coding KNOWN OTTHUMG00000020310.2 59152 4622 35 ENSG00000196312.10 HIATL2 chr9 96898066 97013580 - protein_coding KNOWN OTTHUMG00000020317.3 115515 1313 15 ENSG00000269907.1 RP11-330M2.4 chr9 96910076 96910405 + processed_pseudogene KNOWN OTTHUMG00000020306.2 330 330 1 ENSG00000227257.1 RP11-330M2.3 chr9 96918928 96919318 + processed_pseudogene KNOWN OTTHUMG00000020307.2 391 391 1 ENSG00000188152.11 NUTM2G chr9 96928310 96940253 + protein_coding KNOWN OTTHUMG00000020305.2 11944 3906 14 ENSG00000236745.2 YRDCP2 chr9 96954820 96955461 + processed_pseudogene KNOWN OTTHUMG00000020308.2 642 642 1 ENSG00000136943.9 CTSV chr9 97029679 97039643 - protein_coding KNOWN OTTHUMG00000020314.2 9965 4700 21 ENSG00000197214.5 TCEA1P1 chr9 97067749 97068628 + processed_pseudogene KNOWN OTTHUMG00000020311.2 880 880 1 ENSG00000273136.4 NBPF26 chr1 120805418 120841481 + protein_coding NOVEL OTTHUMG00000189374.1 36064 4899 156 ENSG00000228376.3 GAS2L1P2 chr9 97075671 97081945 - transcribed_processed_pseudogene KNOWN OTTHUMG00000020312.2 6275 2262 4 ENSG00000228038.1 VN1R51P chr9 97093694 97094638 - processed_pseudogene KNOWN OTTHUMG00000020315.1 945 945 1 ENSG00000213612.3 FAM220CP chr9 97121659 97122489 + processed_pseudogene KNOWN OTTHUMG00000020316.2 831 831 1 ENSG00000277103.1 RP11-520B13.8 chr9 97151894 97152694 - processed_pseudogene KNOWN OTTHUMG00000187832.1 801 801 1 ENSG00000159712.10 ANKRD18CP chr9 97156570 97221235 - unprocessed_pseudogene KNOWN OTTHUMG00000020318.3 64666 2980 16 ENSG00000252721.1 RNU6-798P chr9 97192923 97193025 - snRNA KNOWN NA 103 103 1 ENSG00000242375.1 RP11-498P14.3 chr9 97195351 97197687 - lincRNA NOVEL OTTHUMG00000020319.1 2337 474 3 ENSG00000188801.9 ZNF322P1 chr9 97198303 97199511 - processed_pseudogene KNOWN OTTHUMG00000020322.3 1209 1209 1 ENSG00000203279.3 RP11-498P14.5 chr9 97200475 97238700 - lincRNA NOVEL OTTHUMG00000020321.2 38226 806 5 ENSG00000235494.1 RP11-498P14.4 chr9 97233201 97235014 + lincRNA NOVEL OTTHUMG00000020320.1 1814 281 2 ENSG00000275538.1 RNVU1-19 chr1 120850819 120850985 - snRNA KNOWN NA 167 167 1 ENSG00000254876.4 RP11-23J9.5 chr9 97238449 97297314 + processed_transcript NOVEL OTTHUMG00000166998.1 58866 3701 28 ENSG00000255036.4 RP11-23J9.4 chr9 97238497 97377287 + processed_transcript NOVEL OTTHUMG00000166999.1 138791 7116 229 ENSG00000254483.1 RP11-23J9.6 chr9 97238645 97246184 + unprocessed_pseudogene KNOWN OTTHUMG00000020323.3 7540 134 2 ENSG00000254633.1 RP11-23J9.7 chr9 97276566 97295759 + unitary_pseudogene KNOWN OTTHUMG00000167000.1 19194 1341 12 ENSG00000197816.12 CCDC180 chr9 97307304 97378524 + protein_coding KNOWN OTTHUMG00000167001.1 71221 14155 109 ENSG00000221269.1 MIR1302-8 chr9 97363554 97363681 - miRNA KNOWN NA 128 128 1 ENSG00000228957.1 RP11-23J9.3 chr9 97386240 97396112 - unprocessed_pseudogene KNOWN OTTHUMG00000020324.1 9873 821 11 ENSG00000196116.7 TDRD7 chr9 97411950 97496125 + protein_coding KNOWN OTTHUMG00000020326.1 84176 4320 19 ENSG00000136842.12 TMOD1 chr9 97501180 97601748 + protein_coding KNOWN OTTHUMG00000020325.2 100569 3708 27 ENSG00000228174.6 RP11-244N9.6 chr9 97512706 97517836 - antisense NOVEL OTTHUMG00000020329.3 5131 1408 8 ENSG00000263353.3 PPIAL4B chr1 120889746 120890405 + protein_coding KNOWN OTTHUMG00000185015.2 660 660 1 ENSG00000136925.13 TSTD2 chr9 97600080 97633575 - protein_coding KNOWN OTTHUMG00000020328.6 33496 5875 34 ENSG00000136937.11 NCBP1 chr9 97633626 97673748 + protein_coding KNOWN OTTHUMG00000020332.4 40123 5548 39 ENSG00000231521.1 RP11-244N9.4 chr9 97634515 97636051 - antisense NOVEL OTTHUMG00000020327.1 1537 285 3 ENSG00000136936.9 XPA chr9 97674909 97697357 - protein_coding KNOWN OTTHUMG00000020330.3 22449 1833 19 ENSG00000214417.4 KRT18P13 chr9 97698922 97700734 + processed_pseudogene KNOWN OTTHUMG00000020331.2 1813 1290 2 ENSG00000266608.1 AL445531.1 chr9 97700234 97700325 + miRNA NOVEL NA 92 92 1 ENSG00000260677.1 RP11-546O6.4 chr9 97743208 97744935 + lincRNA NOVEL OTTHUMG00000175666.1 1728 1728 1 ENSG00000236130.1 PTCSC2 chr9 97805935 97810008 - lincRNA NOVEL OTTHUMG00000020335.1 4074 204 2 ENSG00000178919.8 FOXE1 chr9 97853254 97856715 + protein_coding KNOWN OTTHUMG00000020333.1 3462 3462 1 ENSG00000136932.12 C9orf156 chr9 97904489 97922570 - protein_coding KNOWN OTTHUMG00000021007.1 18082 4203 30 ENSG00000227634.1 RP11-431K24.3 chr1 8208672 8215210 + lincRNA NOVEL OTTHUMG00000001769.1 6539 497 4 ENSG00000281741.1 AC241377.2 chr1 120913151 120914238 - protein_coding NOVEL NA 1088 1088 1 ENSG00000201830.1 Y_RNA chr9 97915690 97915796 + misc_RNA NOVEL NA 107 107 1 ENSG00000136929.11 HEMGN chr9 97926791 97944856 - protein_coding KNOWN OTTHUMG00000020336.2 18066 2394 9 ENSG00000136938.8 ANP32B chr9 97983361 98015943 + protein_coding KNOWN OTTHUMG00000020338.4 32583 1850 14 ENSG00000236896.1 RP11-535C21.3 chr9 97986551 97987656 - antisense NOVEL OTTHUMG00000020337.1 1106 402 2 ENSG00000212521.1 RNU6-918P chr9 98032230 98032335 + snRNA KNOWN NA 106 106 1 ENSG00000095380.10 NANS chr9 98056739 98083075 + protein_coding KNOWN OTTHUMG00000020341.1 26337 4922 22 ENSG00000106785.13 TRIM14 chr9 98069275 98119212 - protein_coding KNOWN OTTHUMG00000020339.4 49938 5469 32 ENSG00000274011.1 Metazoa_SRP chr9 98115885 98116135 + misc_RNA NOVEL NA 251 251 1 ENSG00000106789.11 CORO2A chr9 98120975 98192640 - protein_coding KNOWN OTTHUMG00000020340.1 71666 5717 24 ENSG00000095383.18 TBC1D2 chr9 98198999 98255721 - protein_coding KNOWN OTTHUMG00000020343.3 56723 3681 62 ENSG00000226067.5 CH17-118O6.2 chr1 120913275 121009291 + lincRNA NOVEL OTTHUMG00000185016.1 96017 2075 15 ENSG00000278412.1 MIR6854 chr9 98229149 98229217 - miRNA KNOWN NA 69 69 1 ENSG00000224001.2 RP11-270F18.2 chr9 98234709 98235567 + processed_pseudogene KNOWN OTTHUMG00000020342.2 859 555 2 ENSG00000136928.4 GABBR2 chr9 98288109 98709197 - protein_coding KNOWN OTTHUMG00000020345.1 421089 6007 24 ENSG00000229897.2 SEPT7P7 chr9 98606833 98608133 + processed_pseudogene KNOWN OTTHUMG00000020344.2 1301 1301 1 ENSG00000281579.1 AL353782.2 chr9 98634605 98634730 + miRNA NOVEL NA 126 126 1 ENSG00000273751.2 AL353782.1 chr9 98712730 98712814 - miRNA NOVEL NA 85 85 1 ENSG00000165138.15 ANKS6 chr9 98731329 98796965 - protein_coding KNOWN OTTHUMG00000020347.2 65637 8804 46 ENSG00000119514.6 GALNT12 chr9 98807699 98850081 + protein_coding KNOWN OTTHUMG00000020348.2 42383 3137 19 ENSG00000267026.4 RP11-92C4.3 chr9 98847172 98872415 - antisense NOVEL OTTHUMG00000020349.3 25244 4778 68 ENSG00000229338.1 RP11-92C4.4 chr9 98890590 98891937 + processed_pseudogene KNOWN OTTHUMG00000020350.1 1348 318 2 ENSG00000277610.1 RNVU1-20 chr1 120942600 120942763 + snRNA KNOWN NA 164 164 1 ENSG00000204291.9 COL15A1 chr9 98943179 99070792 + protein_coding KNOWN OTTHUMG00000020351.4 127614 6653 94 ENSG00000270412.1 RP11-92C4.6 chr9 98943337 98943775 - antisense NOVEL OTTHUMG00000185170.1 439 439 1 ENSG00000264740.2 AL354923.1 chr9 99074120 99074230 - miRNA NOVEL NA 111 111 1 ENSG00000106799.11 TGFBR1 chr9 99104038 99154192 + protein_coding KNOWN OTTHUMG00000020353.5 50155 6844 58 ENSG00000252942.1 RNA5SP290 chr9 99145840 99145966 - rRNA KNOWN NA 127 127 1 ENSG00000227269.1 RP11-96L7.2 chr9 99183373 99184891 + lincRNA NOVEL OTTHUMG00000020352.1 1519 439 2 ENSG00000240235.3 RN7SL794P chr9 99185587 99185866 - misc_RNA KNOWN NA 280 280 1 ENSG00000119523.9 ALG2 chr9 99216426 99221956 - protein_coding KNOWN OTTHUMG00000020355.5 5531 2983 7 ENSG00000106803.8 SEC61B chr9 99222064 99230615 + protein_coding KNOWN OTTHUMG00000020354.2 8552 1190 10 ENSG00000222337.1 RN7SKP225 chr9 99284022 99284373 + misc_RNA KNOWN NA 352 352 1 ENSG00000275585.1 CH17-118O6.3 chr1 120985692 121052167 - antisense NOVEL OTTHUMG00000185017.1 66476 553 3 ENSG00000255815.3 KRT8P11 chr9 99305176 99306611 + processed_pseudogene KNOWN OTTHUMG00000020356.2 1436 1436 1 ENSG00000271086.4 NAMA chr9 99355337 99377240 - lincRNA NOVEL OTTHUMG00000185286.1 21904 5073 25 ENSG00000277828.1 NAMA_1 chr9 99357827 99357957 + misc_RNA NOVEL NA 131 131 1 ENSG00000277465.1 NAMA_2 chr9 99368447 99368566 + misc_RNA NOVEL NA 120 120 1 ENSG00000234860.1 RP11-547C13.1 chr9 99531696 99536924 + lincRNA NOVEL OTTHUMG00000020357.1 5229 419 2 ENSG00000237461.1 RP11-554F20.1 chr9 99585786 99819889 - lincRNA NOVEL OTTHUMG00000020358.1 234104 1544 7 ENSG00000119508.16 NR4A3 chr9 99821855 99866891 + protein_coding KNOWN OTTHUMG00000021030.2 45037 6314 29 ENSG00000255145.2 STX17-AS1 chr9 99886322 99906601 - antisense NOVEL OTTHUMG00000166238.2 20280 548 3 ENSG00000136874.9 STX17 chr9 99906633 99970341 + protein_coding KNOWN OTTHUMG00000020359.4 63709 4740 66 ENSG00000254571.1 RP11-60I3.4 chr9 99915077 99929896 - antisense NOVEL OTTHUMG00000166239.1 14820 336 2 ENSG00000273516.1 U1 chr1 121008362 121008507 - snRNA NOVEL NA 146 146 1 ENSG00000023318.7 ERP44 chr9 99979179 100099040 - protein_coding KNOWN OTTHUMG00000020363.1 119862 4854 12 ENSG00000234709.2 UPF3AP3 chr9 99998301 99999069 - transcribed_processed_pseudogene KNOWN OTTHUMG00000020360.2 769 769 1 ENSG00000119509.11 INVS chr9 100099256 100301000 + protein_coding KNOWN OTTHUMG00000020364.4 201745 5943 60 ENSG00000239908.3 RN7SL75P chr9 100102559 100102839 + misc_RNA KNOWN NA 281 281 1 ENSG00000238172.2 RPS2P35 chr9 100116755 100117651 - processed_pseudogene KNOWN OTTHUMG00000020361.2 897 897 1 ENSG00000270995.1 RP11-29B11.5 chr9 100120435 100120900 - processed_pseudogene KNOWN OTTHUMG00000184655.1 466 466 1 ENSG00000231697.3 NANOGP5 chr9 100175178 100176054 + transcribed_processed_pseudogene KNOWN OTTHUMG00000020362.3 877 877 1 ENSG00000136891.12 TEX10 chr9 100302077 100352939 - protein_coding KNOWN OTTHUMG00000020366.1 50863 7261 37 ENSG00000263475.2 AL353805.1 chr9 100395629 100395740 + miRNA NOVEL NA 112 112 1 ENSG00000066697.13 MSANTD3 chr9 100427156 100451711 + protein_coding KNOWN OTTHUMG00000020365.1 24556 3253 22 ENSG00000212094.3 AC241377.1 chr1 121045497 121045588 + miRNA NOVEL NA 92 92 1 ENSG00000251349.3 MSANTD3-TMEFF1 chr9 100442271 100577636 + protein_coding KNOWN OTTHUMG00000161540.2 135366 2069 10 ENSG00000241697.4 TMEFF1 chr9 100473113 100577636 + protein_coding KNOWN OTTHUMG00000020367.1 104524 2611 10 ENSG00000170681.6 MURC chr9 100578079 100587906 + protein_coding KNOWN OTTHUMG00000020368.2 9828 2615 2 ENSG00000200966.1 RN7SKP87 chr9 100581079 100581379 - misc_RNA KNOWN NA 301 301 1 ENSG00000237999.2 RP11-394D2.1 chr9 100731240 100732355 + processed_pseudogene KNOWN OTTHUMG00000020369.2 1116 1116 1 ENSG00000281312.1 AL390876.1 chr9 100732033 100732116 + miRNA NOVEL NA 84 84 1 ENSG00000230161.1 RP11-62L10.1 chr9 100912320 100912741 + processed_pseudogene KNOWN OTTHUMG00000020370.1 422 422 1 ENSG00000229541.2 GAPDHP26 chr9 100975668 100976682 + processed_pseudogene KNOWN OTTHUMG00000020371.2 1015 1015 1 ENSG00000148123.13 RP11-35N6.1 chr9 101028709 101325135 + protein_coding KNOWN OTTHUMG00000020373.2 296427 3669 27 ENSG00000238143.1 RP11-70K10.2 chr9 101125436 101125921 - processed_pseudogene KNOWN OTTHUMG00000020372.1 486 486 1 ENSG00000275296.1 CH17-118O6.4 chr1 121058948 121059353 - processed_pseudogene KNOWN OTTHUMG00000185018.1 406 406 1 ENSG00000253041.1 SNORA31 chr9 101322477 101322533 + snoRNA NOVEL NA 57 57 1 ENSG00000227411.1 BAATP1 chr9 101334084 101339347 - unitary_pseudogene KNOWN OTTHUMG00000020374.1 5264 1225 3 ENSG00000236763.2 TRMT112P4 chr9 101356466 101356844 - processed_pseudogene KNOWN OTTHUMG00000020375.2 379 379 1 ENSG00000230328.2 RP11-35N6.6 chr9 101358932 101361242 + processed_pseudogene KNOWN OTTHUMG00000020376.2 2311 1580 3 ENSG00000136881.10 BAAT chr9 101360417 101383519 - protein_coding KNOWN OTTHUMG00000020377.1 23103 3389 7 ENSG00000234502.2 FYTTD1P1 chr9 101375344 101376603 - processed_pseudogene KNOWN OTTHUMG00000020379.2 1260 921 2 ENSG00000136897.7 MRPL50 chr9 101387633 101398614 - protein_coding KNOWN OTTHUMG00000020384.1 10982 3332 2 ENSG00000136870.9 ZNF189 chr9 101398873 101410660 + protein_coding KNOWN OTTHUMG00000020383.2 11788 3433 14 ENSG00000136872.16 ALDOB chr9 101420578 101435823 - protein_coding KNOWN OTTHUMG00000020378.2 15246 2451 22 ENSG00000270982.1 RP11-490D19.11 chr9 101449801 101449933 + processed_pseudogene KNOWN OTTHUMG00000184706.1 133 133 1 ENSG00000198019.11 FCGR1B chr1 121087345 121096310 + protein_coding KNOWN OTTHUMG00000040903.7 8966 3383 43 ENSG00000225376.4 TMEM246-AS1 chr9 101468439 101481502 + antisense NOVEL OTTHUMG00000020380.1 13064 860 12 ENSG00000165152.7 TMEM246 chr9 101473171 101533537 - protein_coding KNOWN OTTHUMG00000020381.1 60367 5568 11 ENSG00000233055.1 RP11-490D19.8 chr9 101501643 101501885 - processed_pseudogene KNOWN OTTHUMG00000020382.1 243 243 1 ENSG00000155827.10 RNF20 chr9 101533851 101563344 + protein_coding KNOWN OTTHUMG00000020385.3 29494 4694 37 ENSG00000265068.1 AL591377.1 chr9 101549686 101549771 - miRNA NOVEL NA 86 86 1 ENSG00000198785.4 GRIN3A chr9 101569353 101738580 - protein_coding KNOWN OTTHUMG00000020387.1 169228 8121 12 ENSG00000188386.5 PPP3R2 chr9 101591615 101595001 - protein_coding KNOWN OTTHUMG00000020386.1 3387 3387 1 ENSG00000230302.2 MTND3P4 chr9 101793454 101793756 - processed_pseudogene KNOWN OTTHUMG00000020389.2 303 303 1 ENSG00000230418.2 ARL2BPP7 chr9 102055252 102055741 - processed_pseudogene KNOWN OTTHUMG00000020390.2 490 490 1 ENSG00000238882.1 RNU6-329P chr9 102256604 102256710 + snRNA KNOWN NA 107 107 1 ENSG00000234998.1 RP11-439A17.10 chr1 121087528 121116676 - antisense NOVEL OTTHUMG00000041039.2 29149 459 2 ENSG00000222117.1 AL391867.1 chr9 102295377 102295464 + miRNA NOVEL NA 88 88 1 ENSG00000235901.2 RP11-342F21.1 chr9 102515204 102518308 + processed_pseudogene KNOWN OTTHUMG00000020392.2 3105 3105 1 ENSG00000204250.3 LINC00587 chr9 102519636 102657514 + lincRNA KNOWN OTTHUMG00000020393.1 137879 590 5 ENSG00000232242.2 ZYG11AP1 chr9 102611162 102612155 - processed_pseudogene KNOWN OTTHUMG00000020394.2 994 837 2 ENSG00000234269.2 RP11-338N12.1 chr9 102922574 102923244 + processed_pseudogene KNOWN OTTHUMG00000020395.2 671 671 1 ENSG00000155833.13 CYLC2 chr9 102995311 103018488 + protein_coding KNOWN OTTHUMG00000020396.5 23178 2276 22 ENSG00000229830.1 RP11-341A22.1 chr9 103065416 103065598 + processed_pseudogene KNOWN OTTHUMG00000020397.1 183 183 1 ENSG00000225564.5 LINC01492 chr9 103140523 103325034 - lincRNA NOVEL OTTHUMG00000020399.3 184512 4421 18 ENSG00000226566.2 RP11-436F21.1 chr9 103361952 103429892 - lincRNA NOVEL OTTHUMG00000020400.2 67941 526 3 ENSG00000253031.1 RNA5SP291 chr9 103689473 103689577 - rRNA KNOWN NA 105 105 1 ENSG00000233029.3 RP11-439A17.9 chr1 121090289 121097655 - antisense NOVEL OTTHUMG00000041038.2 7367 3543 2 ENSG00000270332.1 SMC2-AS1 chr9 104080024 104093073 - lincRNA NOVEL OTTHUMG00000185235.1 13050 7619 4 ENSG00000136824.17 SMC2 chr9 104094260 104141417 + protein_coding KNOWN OTTHUMG00000020401.4 47158 6468 88 ENSG00000242111.1 TOPORSLP chr9 104270228 104286955 + unitary_pseudogene KNOWN OTTHUMG00000020402.2 16728 3794 7 ENSG00000203396.3 RP11-217O12.1 chr9 104328320 104329396 - processed_pseudogene KNOWN OTTHUMG00000020403.2 1077 1077 1 ENSG00000186881.3 OR13F1 chr9 104504263 104505222 + protein_coding KNOWN OTTHUMG00000020404.1 960 960 1 ENSG00000148136.5 OR13C4 chr9 104526253 104527209 - protein_coding KNOWN OTTHUMG00000020407.1 957 957 1 ENSG00000204246.2 OR13C3 chr9 104535749 104536856 - protein_coding KNOWN OTTHUMG00000020406.2 1108 1108 1 ENSG00000186943.1 OR13C8 chr9 104569168 104570130 + protein_coding KNOWN OTTHUMG00000020409.1 963 963 1 ENSG00000237443.1 OR13D2P chr9 104590044 104590950 + unprocessed_pseudogene KNOWN OTTHUMG00000020405.1 907 907 1 ENSG00000277556.1 OR13C5 chr9 104598457 104599413 - protein_coding KNOWN OTTHUMG00000020408.2 957 957 1 ENSG00000233645.1 RP11-431K24.4 chr1 8218190 8220529 - lincRNA NOVEL OTTHUMG00000001770.1 2340 477 2 ENSG00000223345.3 HIST2H2BA chr1 121108210 121117257 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000040899.2 9048 756 3 ENSG00000276119.1 OR13C2 chr9 104604671 104605627 - protein_coding KNOWN OTTHUMG00000020415.2 957 957 1 ENSG00000136839.1 OR13C9 chr9 104617248 104618204 - protein_coding KNOWN OTTHUMG00000020416.1 957 957 1 ENSG00000273423.1 OR13I1P chr9 104629754 104631017 + unprocessed_pseudogene KNOWN OTTHUMG00000020410.2 1264 1264 1 ENSG00000235248.2 OR13C1P chr9 104656754 104657716 - unprocessed_pseudogene KNOWN OTTHUMG00000185902.1 963 963 1 ENSG00000179055.6 OR13D1 chr9 104694422 104695462 + protein_coding KNOWN OTTHUMG00000020412.1 1041 1041 1 ENSG00000188712.4 OR13D3P chr9 104722335 104723271 + unprocessed_pseudogene KNOWN OTTHUMG00000020411.2 937 937 1 ENSG00000136783.9 NIPSNAP3A chr9 104747688 104760122 + protein_coding KNOWN OTTHUMG00000020413.1 12435 2585 8 ENSG00000165028.10 NIPSNAP3B chr9 104764157 104777457 + protein_coding KNOWN OTTHUMG00000020414.3 13301 2178 18 ENSG00000165029.14 ABCA1 chr9 104781002 104928237 - protein_coding KNOWN OTTHUMG00000020417.1 147236 11350 67 ENSG00000226334.1 RP11-217B7.2 chr9 104927553 104928892 + antisense NOVEL OTTHUMG00000020418.1 1340 469 2 ENSG00000227193.2 RP11-439A17.4 chr1 121118126 121146826 + lincRNA NOVEL OTTHUMG00000040900.2 28701 494 4 ENSG00000230013.1 RP11-217B7.3 chr9 104990796 104991781 - lincRNA NOVEL OTTHUMG00000020419.1 986 606 2 ENSG00000201583.1 RN7SKP191 chr9 105096756 105097061 + misc_RNA KNOWN NA 306 306 1 ENSG00000238208.1 RP11-112N13.1 chr9 105182480 105186757 - processed_pseudogene KNOWN OTTHUMG00000020420.1 4278 3759 3 ENSG00000070214.14 SLC44A1 chr9 105244622 105439171 + protein_coding KNOWN OTTHUMG00000020421.5 194550 12172 74 ENSG00000106701.10 FSD1L chr9 105447796 105552433 + protein_coding KNOWN OTTHUMG00000020426.9 104638 9877 84 ENSG00000229419.1 RALGAPA1P chr9 105520128 105526359 + processed_pseudogene KNOWN OTTHUMG00000020427.1 6232 6232 1 ENSG00000228317.1 RP11-235C23.5 chr9 105554035 105558029 - antisense NOVEL OTTHUMG00000020423.1 3995 631 3 ENSG00000106692.12 FKTN chr9 105558130 105641118 + protein_coding KNOWN OTTHUMG00000020425.3 82989 8032 71 ENSG00000279609.1 RP11-235C23.6 chr9 105656369 105657989 + TEC KNOWN OTTHUMG00000175689.1 1621 1621 1 ENSG00000186051.6 TAL2 chr9 105662457 105663112 + protein_coding KNOWN OTTHUMG00000020424.2 656 656 1 ENSG00000213244.3 HIST2H3DP1 chr1 121118195 121118610 - unprocessed_pseudogene KNOWN OTTHUMG00000040898.2 416 416 1 ENSG00000095209.10 TMEM38B chr9 105694544 105776612 + protein_coding KNOWN OTTHUMG00000020429.4 82069 4511 25 ENSG00000228366.1 RP11-18B3.3 chr9 105710290 105710781 - processed_pseudogene KNOWN OTTHUMG00000020428.1 492 492 1 ENSG00000232486.1 RP11-18B3.2 chr9 105758164 105760755 + processed_pseudogene KNOWN OTTHUMG00000020430.1 2592 2434 2 ENSG00000228948.2 SLC25A6P5 chr9 105849710 105851425 + processed_pseudogene KNOWN OTTHUMG00000020431.2 1716 1353 3 ENSG00000225002.2 RP11-6F6.1 chr9 106061354 106064825 - lincRNA NOVEL OTTHUMG00000020432.2 3472 456 2 ENSG00000234323.4 RP11-308N19.1 chr9 106278392 106604795 + lincRNA NOVEL OTTHUMG00000020433.1 326404 1759 11 ENSG00000229297.1 RP11-540H22.2 chr9 106584142 106591952 - lincRNA NOVEL OTTHUMG00000020437.1 7811 371 2 ENSG00000277889.1 MIR8081 chr9 106600928 106601022 + miRNA KNOWN NA 95 95 1 ENSG00000237062.1 RP11-308N19.3 chr9 106615078 106615806 - lincRNA NOVEL OTTHUMG00000020434.1 729 597 2 ENSG00000234229.6 LINC01505 chr9 106616058 106702662 + lincRNA NOVEL OTTHUMG00000020435.3 86605 2545 11 ENSG00000268993.1 RP11-439A17.5 chr1 121142051 121142438 - processed_pseudogene KNOWN OTTHUMG00000040901.2 388 388 1 ENSG00000200131.1 RN7SKP77 chr9 106679977 106680329 + misc_RNA KNOWN NA 353 353 1 ENSG00000228143.2 RP11-308N19.5 chr9 106722350 106722930 + processed_pseudogene KNOWN OTTHUMG00000020436.1 581 581 1 ENSG00000212276.1 RNA5SP292 chr9 106843749 106843866 - rRNA KNOWN NA 118 118 1 ENSG00000148143.11 ZNF462 chr9 106863097 107013634 + protein_coding KNOWN OTTHUMG00000020438.3 150538 12259 68 ENSG00000242631.2 RP11-508N12.4 chr9 106923349 106924174 + protein_coding NOVEL OTTHUMG00000020440.2 826 297 2 ENSG00000230782.1 RP11-508N12.2 chr9 106974833 107102988 - antisense NOVEL OTTHUMG00000020444.1 128156 2602 7 ENSG00000231562.1 RP11-508N12.3 chr9 106978776 106979554 - processed_pseudogene KNOWN OTTHUMG00000020439.2 779 779 1 ENSG00000223615.2 RP11-196I18.2 chr9 107115784 107115954 + processed_pseudogene KNOWN OTTHUMG00000020441.2 171 171 1 ENSG00000225531.1 RP11-196I18.3 chr9 107116829 107117557 + processed_pseudogene KNOWN OTTHUMG00000020442.1 729 729 1 ENSG00000226047.1 RP11-196I18.4 chr9 107117459 107121705 - lincRNA NOVEL OTTHUMG00000020443.1 4247 329 3 ENSG00000188610.11 FAM72B chr1 121167646 121185539 - protein_coding KNOWN OTTHUMG00000185025.1 17894 3033 25 ENSG00000226535.1 RP11-417L14.1 chr9 107169569 107171148 - processed_pseudogene KNOWN OTTHUMG00000020445.1 1580 1580 1 ENSG00000119318.11 RAD23B chr9 107283137 107332194 + protein_coding KNOWN OTTHUMG00000020446.1 49058 4615 33 ENSG00000276883.1 AL137852.1 chr9 107292369 107292456 - miRNA NOVEL NA 88 88 1 ENSG00000226825.1 LINC01509 chr9 107420284 107430802 - lincRNA NOVEL OTTHUMG00000020447.1 10519 449 6 ENSG00000213558.3 HMGN2P32 chr9 107458038 107458306 - processed_pseudogene KNOWN OTTHUMG00000020448.1 269 269 1 ENSG00000199905.1 RNU6-492P chr9 107475036 107475139 - snRNA KNOWN NA 104 104 1 ENSG00000136826.13 KLF4 chr9 107484852 107490482 - protein_coding KNOWN OTTHUMG00000020449.2 5631 3659 21 ENSG00000236005.1 RP11-438P9.1 chr9 107534390 107535162 + processed_pseudogene KNOWN OTTHUMG00000020450.1 773 441 2 ENSG00000227350.1 RP11-438P9.2 chr9 107543151 107543616 - processed_pseudogene KNOWN OTTHUMG00000020451.1 466 466 1 ENSG00000202308.1 RNU6-996P chr9 107663140 107663246 - snRNA KNOWN NA 107 107 1 ENSG00000171943.10 SRGAP2C chr1 121184810 121392822 + protein_coding KNOWN OTTHUMG00000041445.3 208013 7311 23 ENSG00000275701.1 AL389915.1 chr9 107712364 107712461 + miRNA NOVEL NA 98 98 1 ENSG00000222558.1 RNU6-1064P chr9 107797744 107797847 - snRNA KNOWN NA 104 104 1 ENSG00000244104.3 RN7SL659P chr9 107811616 107811914 - misc_RNA KNOWN NA 299 299 1 ENSG00000231293.1 RPL36AP6 chr9 107834509 107834829 - processed_pseudogene KNOWN OTTHUMG00000020453.2 321 321 1 ENSG00000233727.1 RP11-380I20.2 chr9 107853783 107854258 - processed_pseudogene KNOWN OTTHUMG00000020452.1 476 177 2 ENSG00000222459.1 RNA5SP293 chr9 107918866 107918978 - rRNA KNOWN NA 113 113 1 ENSG00000236783.1 RPS15AP27 chr9 107963703 107964045 - processed_pseudogene KNOWN OTTHUMG00000020456.1 343 343 1 ENSG00000213557.4 RP11-240E2.2 chr9 108040213 108040592 + processed_pseudogene KNOWN OTTHUMG00000020454.1 380 380 1 ENSG00000237360.2 CHCHD4P2 chr9 108097432 108097851 - processed_pseudogene KNOWN OTTHUMG00000020455.2 420 420 1 ENSG00000230030.1 RP11-505C13.1 chr9 108252154 108254820 - lincRNA NOVEL OTTHUMG00000020457.1 2667 224 2 ENSG00000275129.1 CH17-219N22.1 chr1 121314947 121315055 - processed_pseudogene KNOWN OTTHUMG00000185028.1 109 109 1 ENSG00000222512.1 AL137019.1 chr9 108358852 108358929 - miRNA NOVEL NA 78 78 1 ENSG00000169253.3 RP11-220D10.1 chr9 108626833 108627150 + processed_pseudogene KNOWN OTTHUMG00000020458.2 318 318 1 ENSG00000231678.2 RP11-339N8.1 chr9 108701370 108703092 - lincRNA NOVEL OTTHUMG00000020459.2 1723 400 2 ENSG00000231810.1 RPL36AP35 chr9 108821697 108822004 + processed_pseudogene KNOWN OTTHUMG00000020460.1 308 308 1 ENSG00000213556.3 RP11-3J11.1 chr9 108836333 108836597 + processed_pseudogene KNOWN OTTHUMG00000020463.1 265 265 1 ENSG00000148156.7 ACTL7B chr9 108854589 108856967 - protein_coding KNOWN OTTHUMG00000020462.2 2379 2379 1 ENSG00000187003.6 ACTL7A chr9 108862266 108863759 + protein_coding KNOWN OTTHUMG00000020461.2 1494 1494 1 ENSG00000070061.13 IKBKAP chr9 108867517 108934116 - protein_coding KNOWN OTTHUMG00000020465.8 66600 6048 85 ENSG00000119328.10 FAM206A chr9 108934181 108950744 + protein_coding KNOWN OTTHUMG00000020467.2 16564 2758 17 ENSG00000119326.13 CTNNAL1 chr9 108942569 109013529 - protein_coding KNOWN OTTHUMG00000020466.3 70961 3131 52 ENSG00000230806.1 SRGAP2-AS1 chr1 121360156 121398806 - antisense NOVEL OTTHUMG00000013093.4 38651 2649 7 ENSG00000201227.1 RNA5-8SP3 chr9 108992409 108992569 - rRNA KNOWN NA 161 161 1 ENSG00000106771.11 TMEM245 chr9 109015152 109119945 - protein_coding KNOWN OTTHUMG00000020469.3 104794 9484 52 ENSG00000199331.1 Y_RNA chr9 109042386 109042487 - misc_RNA NOVEL NA 102 102 1 ENSG00000207698.1 MIR32 chr9 109046229 109046298 - miRNA KNOWN NA 70 70 1 ENSG00000260230.2 FRRS1L chr9 109130293 109167291 - protein_coding KNOWN OTTHUMG00000020468.2 36999 8197 5 ENSG00000095203.13 EPB41L4B chr9 109171975 109320964 - protein_coding KNOWN OTTHUMG00000020470.2 148990 7879 42 ENSG00000200106.1 RNU6-984P chr9 109196201 109196309 - snRNA KNOWN NA 109 109 1 ENSG00000265647.1 AL358815.1 chr9 109266277 109266375 + miRNA NOVEL NA 99 99 1 ENSG00000237124.1 MTND2P11 chr9 109300186 109301172 + unprocessed_pseudogene KNOWN OTTHUMG00000020471.1 987 648 2 ENSG00000207329.1 Y_RNA chr9 109324685 109324796 + misc_RNA NOVEL NA 112 112 1 ENSG00000227082.1 CH17-437K3.1 chr1 121396754 121463129 + lincRNA NOVEL OTTHUMG00000188235.1 66376 3662 2 ENSG00000070159.12 PTPN3 chr9 109375466 109498313 - protein_coding KNOWN OTTHUMG00000020475.4 122848 9995 100 ENSG00000263861.1 MIR3927 chr9 109511475 109511545 - miRNA KNOWN NA 71 71 1 ENSG00000213539.4 YBX1P6 chr9 109532830 109534332 - processed_pseudogene KNOWN OTTHUMG00000020474.2 1503 1002 2 ENSG00000243444.6 PALM2 chr9 109640788 109946703 + protein_coding KNOWN OTTHUMG00000020479.2 305916 4943 30 ENSG00000232939.1 RP11-406O23.2 chr9 109760360 109772043 - antisense NOVEL OTTHUMG00000020476.1 11684 478 3 ENSG00000157654.16 PALM2-AKAP2 chr9 109780309 110172512 + protein_coding KNOWN OTTHUMG00000156812.2 392204 8203 30 ENSG00000228053.1 RP11-151F5.2 chr9 110024881 110025358 - processed_pseudogene KNOWN OTTHUMG00000020477.1 478 478 1 ENSG00000241978.8 AKAP2 chr9 110048598 110172512 + protein_coding KNOWN OTTHUMG00000156811.6 123915 7862 25 ENSG00000188959.9 C9orf152 chr9 110190048 110208189 - protein_coding KNOWN OTTHUMG00000020478.2 18142 2947 4 ENSG00000136810.11 TXN chr9 110243811 110256640 - protein_coding KNOWN OTTHUMG00000020480.1 12830 1142 11 ENSG00000274366.1 AC244021.1 chr1 121412448 121412548 + miRNA NOVEL NA 101 101 1 ENSG00000204193.9 TXNDC8 chr9 110303521 110337884 - protein_coding KNOWN OTTHUMG00000020481.3 34364 2135 21 ENSG00000165124.16 SVEP1 chr9 110365251 110579880 - protein_coding KNOWN OTTHUMG00000020482.2 214630 14190 138 ENSG00000206658.1 RNU6-1039P chr9 110369592 110369698 - snRNA KNOWN NA 107 107 1 ENSG00000212254.1 RNU6-124P chr9 110539690 110539798 - snRNA KNOWN NA 109 109 1 ENSG00000232896.1 RP11-410K21.2 chr9 110599475 110605219 + lincRNA NOVEL OTTHUMG00000020483.1 5745 635 3 ENSG00000030304.11 MUSK chr9 110668771 110801579 + protein_coding KNOWN OTTHUMG00000020485.3 132809 4182 63 ENSG00000223918.1 RP13-461N9.2 chr9 110727456 110727679 - processed_pseudogene KNOWN OTTHUMG00000020484.1 224 224 1 ENSG00000198121.12 LPAR1 chr9 110873263 111038458 - protein_coding KNOWN OTTHUMG00000020486.2 165196 4159 24 ENSG00000206923.1 RNU6-432P chr9 110903337 110903445 + snRNA KNOWN NA 109 109 1 ENSG00000207401.1 Y_RNA chr9 110934406 110934507 + misc_RNA NOVEL NA 102 102 1 ENSG00000251977.1 RNU6-991P chr1 8292157 8292263 - snRNA KNOWN NA 107 107 1 ENSG00000231429.2 RP11-343N15.2 chr1 121412719 121429274 + lincRNA NOVEL OTTHUMG00000013086.3 16556 529 4 ENSG00000212409.1 RNY4P18 chr9 111097325 111097413 - misc_RNA KNOWN NA 89 89 1 ENSG00000227531.1 RP11-202G18.1 chr9 111139246 111284836 - lincRNA NOVEL OTTHUMG00000020487.1 145591 744 3 ENSG00000274263.1 MIR7702 chr9 111271156 111271214 - miRNA KNOWN NA 59 59 1 ENSG00000171133.2 OR2K2 chr9 111327483 111328520 - protein_coding KNOWN OTTHUMG00000020488.1 1038 1038 2 ENSG00000136813.13 KIAA0368 chr9 111360692 111484745 - protein_coding KNOWN OTTHUMG00000020489.4 124054 8449 136 ENSG00000223238.1 RNA5SP294 chr9 111411644 111411742 - rRNA KNOWN NA 99 99 1 ENSG00000173258.11 ZNF483 chr9 111525159 111577844 + protein_coding KNOWN OTTHUMG00000020490.1 52686 5738 20 ENSG00000106853.15 PTGR1 chr9 111549722 111599855 - protein_coding KNOWN OTTHUMG00000020493.5 50134 3722 60 ENSG00000224644.1 RP11-16L21.7 chr9 111574192 111575427 + antisense NOVEL OTTHUMG00000020492.1 1236 302 2 ENSG00000204173.9 LRRC37A5P chr9 111602831 111631289 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000020494.3 28459 2271 7 ENSG00000228826.2 RP11-344P13.4 chr1 121494379 121510383 - lincRNA NOVEL OTTHUMG00000013091.3 16005 309 3 ENSG00000059769.18 DNAJC25 chr9 111631352 111654351 + protein_coding KNOWN OTTHUMG00000020491.6 23000 2586 14 ENSG00000244115.1 DNAJC25-GNG10 chr9 111631386 111670229 + protein_coding KNOWN OTTHUMG00000150303.1 38844 1448 3 ENSG00000242616.3 GNG10 chr9 111661335 111670246 + protein_coding KNOWN OTTHUMG00000157193.2 8912 1491 3 ENSG00000165181.15 C9orf84 chr9 111686173 111795008 - protein_coding KNOWN OTTHUMG00000020495.5 108836 6276 110 ENSG00000224067.2 RP11-430K21.2 chr9 111802980 111803435 + processed_pseudogene KNOWN OTTHUMG00000020496.2 456 413 2 ENSG00000206907.1 RNU6-1013P chr9 111839828 111839934 + snRNA KNOWN NA 107 107 1 ENSG00000148154.8 UGCG chr9 111896766 111935369 + protein_coding KNOWN OTTHUMG00000020498.1 38604 4615 25 ENSG00000266315.1 MIR4668 chr9 111932100 111932169 + miRNA KNOWN NA 70 70 1 ENSG00000222356.1 RNU6-710P chr9 111996635 111996739 - snRNA KNOWN NA 105 105 1 ENSG00000259953.1 RP11-4O1.2 chr9 112032555 112037730 - sense_overlapping NOVEL OTTHUMG00000175583.1 5176 4836 5 ENSG00000233432.2 RP11-344P13.3 chr1 121502344 121503891 + processed_pseudogene KNOWN OTTHUMG00000013090.2 1548 1548 1 ENSG00000106868.15 SUSD1 chr9 112040785 112175408 - protein_coding KNOWN OTTHUMG00000020499.4 134624 4183 91 ENSG00000222327.1 RNU6-855P chr9 112137797 112137900 + snRNA KNOWN NA 104 104 1 ENSG00000200261.1 Y_RNA chr9 112169286 112169397 + misc_RNA NOVEL NA 112 112 1 ENSG00000225513.1 RP11-165N19.2 chr9 112173522 112173971 - processed_pseudogene KNOWN OTTHUMG00000020500.1 450 450 1 ENSG00000119314.14 PTBP3 chr9 112217716 112333667 - protein_coding KNOWN OTTHUMG00000020503.2 115952 8239 83 ENSG00000242256.3 RN7SL57P chr9 112242550 112242839 - misc_RNA KNOWN NA 290 290 1 ENSG00000199525.1 RNA5SP295 chr9 112252258 112252378 + rRNA KNOWN NA 121 121 1 ENSG00000243911.3 RN7SL430P chr9 112272596 112272837 - misc_RNA KNOWN NA 242 242 1 ENSG00000230081.2 HSPE1P28 chr9 112280978 112281335 - processed_pseudogene KNOWN OTTHUMG00000020501.2 358 211 2 ENSG00000213529.3 RP11-432F4.2 chr9 112362714 112363116 + processed_pseudogene KNOWN OTTHUMG00000020502.1 403 403 1 ENSG00000272583.1 RP11-344P13.6 chr1 121518366 121518829 - lincRNA NOVEL OTTHUMG00000186402.1 464 464 1 ENSG00000119471.13 HSDL2 chr9 112379937 112472410 + protein_coding KNOWN OTTHUMG00000020504.5 92474 3455 42 ENSG00000230185.4 C9orf147 chr9 112433816 112487204 - antisense KNOWN OTTHUMG00000020505.1 53389 1718 11 ENSG00000165185.13 KIAA1958 chr9 112486847 112669397 + protein_coding KNOWN OTTHUMG00000020508.1 182551 13119 12 ENSG00000250068.1 RP11-576C12.1 chr9 112581779 112582590 - unprocessed_pseudogene KNOWN OTTHUMG00000020507.1 812 260 3 ENSG00000148153.12 INIP chr9 112683926 112718236 - protein_coding KNOWN OTTHUMG00000020509.3 34311 4423 26 ENSG00000226609.1 RP11-276E15.4 chr9 112748902 112750456 - antisense NOVEL OTTHUMG00000020510.1 1555 420 2 ENSG00000148158.15 SNX30 chr9 112750838 112881671 + protein_coding KNOWN OTTHUMG00000020512.2 130834 11578 19 ENSG00000119457.7 SLC46A2 chr9 112878920 112890913 - protein_coding KNOWN OTTHUMG00000020513.3 11994 2502 8 ENSG00000271631.1 RP11-408O19.5 chr9 112885158 112885767 + antisense NOVEL OTTHUMG00000184199.1 610 610 1 ENSG00000237906.1 MUPP chr9 112959134 112962261 - unitary_pseudogene KNOWN OTTHUMG00000020511.1 3128 566 6 ENSG00000231752.4 EMBP1 chr1 121519112 121571892 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000185035.2 52781 4333 19 ENSG00000228623.3 ZNF883 chr9 112997120 113050043 - lincRNA NOVEL OTTHUMG00000020514.1 52924 2447 7 ENSG00000136866.12 ZFP37 chr9 113038380 113056759 - protein_coding KNOWN OTTHUMG00000021019.2 18380 6354 12 ENSG00000225684.3 FAM225B chr9 113103338 113111500 - lincRNA KNOWN OTTHUMG00000020515.3 8163 7407 5 ENSG00000231528.2 FAM225A chr9 113113073 113119928 + lincRNA KNOWN OTTHUMG00000020516.3 6856 6100 5 ENSG00000136867.9 SLC31A2 chr9 113150942 113164137 + protein_coding KNOWN OTTHUMG00000021037.2 13196 2504 11 ENSG00000119321.7 FKBP15 chr9 113161006 113221361 - protein_coding KNOWN OTTHUMG00000020518.2 60356 11060 80 ENSG00000136868.10 SLC31A1 chr9 113221562 113264492 + protein_coding KNOWN OTTHUMG00000020519.2 42931 5127 7 ENSG00000176386.7 CDC26 chr9 113255835 113275589 - protein_coding KNOWN OTTHUMG00000020521.1 19755 1175 9 ENSG00000136875.11 PRPF4 chr9 113275343 113292905 + protein_coding KNOWN OTTHUMG00000020517.2 17563 3613 30 ENSG00000165188.12 RNF183 chr9 113297093 113303376 - protein_coding KNOWN OTTHUMG00000020520.3 6284 3646 20 ENSG00000224857.1 RP11-344P13.1 chr1 121573946 121580524 - lincRNA NOVEL OTTHUMG00000013087.1 6579 426 2 ENSG00000148225.14 WDR31 chr9 113313222 113340298 - protein_coding KNOWN OTTHUMG00000020525.4 27077 4933 62 ENSG00000119411.10 BSPRY chr9 113349541 113371233 + protein_coding KNOWN OTTHUMG00000021006.2 21693 2339 11 ENSG00000119431.8 HDHD3 chr9 113373419 113376999 - protein_coding KNOWN OTTHUMG00000020524.1 3581 2105 8 ENSG00000148218.14 ALAD chr9 113386317 113401333 - protein_coding KNOWN OTTHUMG00000020522.3 15017 4983 50 ENSG00000148229.11 POLE3 chr9 113407235 113410672 - protein_coding KNOWN OTTHUMG00000020523.2 3438 2604 15 ENSG00000157653.10 C9orf43 chr9 113410054 113429684 + protein_coding KNOWN OTTHUMG00000020526.2 19631 2290 33 ENSG00000138835.21 RGS3 chr9 113444731 113597743 + protein_coding KNOWN OTTHUMG00000021048.8 153013 13793 243 ENSG00000237073.1 RP11-168K11.2 chr9 113570190 113590019 - antisense NOVEL OTTHUMG00000020527.1 19830 395 3 ENSG00000233817.1 RP11-168K11.3 chr9 113619228 113622634 + lincRNA NOVEL OTTHUMG00000020528.1 3407 3043 2 ENSG00000227482.1 RP11-18B16.2 chr9 113650956 113682855 + lincRNA NOVEL OTTHUMG00000020530.1 31900 1223 3 ENSG00000276118.1 CH17-333M13.2 chr1 143343180 143343275 + unprocessed_pseudogene KNOWN OTTHUMG00000188679.1 96 96 1 ENSG00000214669.3 RP11-18B16.1 chr9 113758994 113759419 - processed_pseudogene KNOWN OTTHUMG00000020529.2 426 426 1 ENSG00000211556.2 AL157702.1 chr9 113792358 113792439 - miRNA NOVEL NA 82 82 1 ENSG00000232905.2 RP11-534I8.1 chr9 113850687 113851632 - processed_pseudogene KNOWN OTTHUMG00000020531.2 946 946 1 ENSG00000157657.13 ZNF618 chr9 113876282 114056591 + protein_coding KNOWN OTTHUMG00000020532.1 180310 10384 84 ENSG00000106927.10 AMBP chr9 114060127 114078472 - protein_coding KNOWN OTTHUMG00000020534.3 18346 2041 33 ENSG00000136883.11 KIF12 chr9 114086126 114099227 - protein_coding KNOWN OTTHUMG00000020533.3 13102 2975 47 ENSG00000196739.13 COL27A1 chr9 114155560 114312511 + protein_coding KNOWN OTTHUMG00000020537.4 156952 13988 144 ENSG00000207726.2 MIR455 chr9 114209417 114209526 + miRNA KNOWN NA 110 110 1 ENSG00000229314.5 ORM1 chr9 114323056 114326475 + protein_coding KNOWN OTTHUMG00000021012.1 3420 901 10 ENSG00000228278.3 ORM2 chr9 114329869 114333252 + protein_coding KNOWN OTTHUMG00000021014.1 3384 760 6 ENSG00000277095.1 CH17-333M13.1 chr1 143354191 143386122 + unprocessed_pseudogene KNOWN OTTHUMG00000188680.1 31932 1807 5 ENSG00000106948.15 AKNA chr9 114334156 114394405 - protein_coding KNOWN OTTHUMG00000020538.2 60250 10601 114 ENSG00000235119.1 RP11-9M16.2 chr9 114396724 114398503 - lincRNA NOVEL OTTHUMG00000020540.1 1780 173 2 ENSG00000095397.12 DFNB31 chr9 114402080 114505450 - protein_coding KNOWN OTTHUMG00000020539.4 103371 5542 36 ENSG00000271214.1 RP11-9M16.3 chr9 114491564 114491741 + processed_pseudogene KNOWN OTTHUMG00000184708.1 178 178 1 ENSG00000235797.2 RP11-402G3.6 chr9 114572901 114573371 + processed_pseudogene KNOWN OTTHUMG00000020545.2 471 471 1 ENSG00000136888.6 ATP6V1G1 chr9 114587746 114598373 + protein_coding KNOWN OTTHUMG00000021023.1 10628 1305 5 ENSG00000157693.13 C9orf91 chr9 114611206 114646422 + protein_coding KNOWN OTTHUMG00000020541.1 35217 4792 25 ENSG00000201749.1 Y_RNA chr9 114615455 114615568 - misc_RNA NOVEL NA 114 114 1 ENSG00000230054.1 RP11-402G3.5 chr9 114656304 114662374 - lincRNA NOVEL OTTHUMG00000020544.1 6071 536 4 ENSG00000230601.4 RP11-402G3.3 chr9 114666434 114682089 - lincRNA NOVEL OTTHUMG00000020542.1 15656 731 9 ENSG00000277702.1 CH17-13I23.3 chr1 143419625 143420207 - unprocessed_pseudogene KNOWN OTTHUMG00000188681.1 583 213 2 ENSG00000230284.1 RP11-402G3.4 chr9 114695922 114696315 - processed_pseudogene KNOWN OTTHUMG00000020543.1 394 394 1 ENSG00000263546.2 AL390240.1 chr9 114774319 114774407 - miRNA NOVEL NA 89 89 1 ENSG00000274919.1 RP11-428F18.2 chr9 114774737 114775120 - processed_pseudogene KNOWN OTTHUMG00000187859.1 384 384 1 ENSG00000181634.7 TNFSF15 chr9 114784635 114806126 - protein_coding KNOWN OTTHUMG00000021011.2 21492 7889 5 ENSG00000229817.1 RP11-78H18.2 chr9 114845594 114848585 + processed_pseudogene KNOWN OTTHUMG00000020546.1 2992 2992 1 ENSG00000106952.6 TNFSF8 chr9 114893343 114930595 - protein_coding KNOWN OTTHUMG00000021025.1 37253 2906 11 ENSG00000041982.13 TNC chr9 115019578 115118257 - protein_coding KNOWN OTTHUMG00000021010.4 98680 9636 178 ENSG00000236461.1 RP11-523L1.2 chr9 115119539 115138409 - lincRNA NOVEL OTTHUMG00000020548.1 18871 1525 6 ENSG00000173077.13 DEC1 chr9 115141818 115402644 + protein_coding KNOWN OTTHUMG00000020549.1 260827 4707 17 ENSG00000234692.1 RP11-445L6.3 chr9 115252538 115254251 - lincRNA NOVEL OTTHUMG00000020547.1 1714 427 3 ENSG00000252830.2 5S_rRNA chr1 143439605 143439714 + rRNA NOVEL NA 110 110 1 ENSG00000274755.1 U2 chr9 115734392 115734491 + snRNA NOVEL NA 100 100 1 ENSG00000228714.2 RP11-284G10.1 chr9 115739663 115744239 - lincRNA NOVEL OTTHUMG00000020550.2 4577 396 3 ENSG00000204148.3 LINC00474 chr9 115888169 115925207 - lincRNA KNOWN OTTHUMG00000020551.3 37039 769 3 ENSG00000228707.1 RP11-787B4.2 chr9 116012361 116012965 + lincRNA NOVEL OTTHUMG00000020552.1 605 509 2 ENSG00000182752.9 PAPPA chr9 116153804 116402322 + protein_coding KNOWN OTTHUMG00000021045.1 248519 11573 29 ENSG00000221772.3 AL353141.1 chr9 116198990 116199079 + miRNA NOVEL NA 90 90 1 ENSG00000226604.2 PAPPA-AS2 chr9 116285829 116288769 - antisense NOVEL OTTHUMG00000020554.1 2941 1854 2 ENSG00000244757.1 RP11-45A16.4 chr9 116288618 116318689 - antisense NOVEL OTTHUMG00000020555.2 30072 728 4 ENSG00000216182.1 AL137024.1 chr9 116393589 116393676 - miRNA NOVEL NA 88 88 1 ENSG00000256040.2 PAPPA-AS1 chr9 116398157 116400606 - antisense NOVEL OTTHUMG00000187226.1 2450 2450 1 ENSG00000162426.13 SLC45A1 chr1 8317826 8344167 + protein_coding KNOWN OTTHUMG00000000503.6 26342 2888 25 ENSG00000264145.2 CH17-13I23.2 chr1 143449571 143450245 - processed_pseudogene KNOWN OTTHUMG00000188682.1 675 675 1 ENSG00000148219.15 ASTN2 chr9 116425225 117415070 - protein_coding KNOWN OTTHUMG00000021013.2 989846 8290 114 ENSG00000229105.1 ASTN2-AS1 chr9 116504283 116562293 + antisense NOVEL OTTHUMG00000020556.1 58011 1756 12 ENSG00000230894.1 RP11-67K19.3 chr9 116568449 116586328 + antisense NOVEL OTTHUMG00000020557.1 17880 4996 3 ENSG00000119401.10 TRIM32 chr9 116687302 116701300 + protein_coding KNOWN OTTHUMG00000021026.2 13999 3780 7 ENSG00000265662.1 AL354981.1 chr9 117099007 117099106 + miRNA NOVEL NA 100 100 1 ENSG00000230734.1 RPL10P3 chr9 117180628 117181095 - processed_pseudogene KNOWN OTTHUMG00000020559.2 468 468 1 ENSG00000207268.1 SNORA70C chr9 117181066 117181200 - snoRNA KNOWN NA 135 135 1 ENSG00000201140.1 RN7SKP128 chr9 117197118 117197420 + misc_RNA KNOWN NA 303 303 1 ENSG00000222413.1 RN7SKP125 chr9 117276985 117277286 + misc_RNA KNOWN NA 302 302 1 ENSG00000233516.1 RP11-388N2.1 chr9 117462294 117466260 - lincRNA NOVEL OTTHUMG00000020560.1 3967 751 2 ENSG00000274927.1 CH17-13I23.1 chr1 143461221 143498767 - unprocessed_pseudogene KNOWN OTTHUMG00000188683.1 37547 1232 10 ENSG00000233569.1 RP11-500B12.1 chr9 117648606 117657027 + lincRNA NOVEL OTTHUMG00000020561.1 8422 1299 6 ENSG00000235133.1 RPL35AP22 chr9 117685254 117685588 - processed_pseudogene KNOWN OTTHUMG00000020562.2 335 335 1 ENSG00000136869.13 TLR4 chr9 117704332 117716871 + protein_coding KNOWN OTTHUMG00000021046.4 12540 5256 11 ENSG00000201444.1 RNU6-1082P chr9 117707996 117708102 - snRNA KNOWN NA 107 107 1 ENSG00000228512.2 RP11-281A20.2 chr9 117783448 117868071 + lincRNA NOVEL OTTHUMG00000020564.2 84624 521 3 ENSG00000231901.1 RP11-281A20.1 chr9 117840322 117897256 - lincRNA NOVEL OTTHUMG00000020563.1 56935 625 4 ENSG00000234782.3 TPT1P9 chr9 118082869 118083382 - processed_pseudogene KNOWN OTTHUMG00000020565.1 514 514 1 ENSG00000225050.1 RP11-349E4.1 chr9 118687752 118705960 - lincRNA NOVEL OTTHUMG00000020566.1 18209 386 2 ENSG00000235201.1 RP11-127L21.1 chr9 118740563 118745312 + lincRNA NOVEL OTTHUMG00000020567.1 4750 256 2 ENSG00000231166.2 TUBB4BP6 chr9 118763867 118764345 + processed_pseudogene KNOWN OTTHUMG00000020568.2 479 479 1 ENSG00000242943.1 NKAIN1P1 chr1 143487772 143488353 + processed_pseudogene KNOWN OTTHUMG00000040703.2 582 582 1 ENSG00000078725.11 BRINP1 chr9 119153458 119369467 - protein_coding KNOWN OTTHUMG00000021020.2 216010 3905 16 ENSG00000260970.1 RP11-295D22.1 chr9 119495375 119524125 + lincRNA NOVEL OTTHUMG00000175629.1 28751 1463 3 ENSG00000276419.1 AC006288.1 chr9 119511669 119511760 + miRNA NOVEL NA 92 92 1 ENSG00000281143.1 AL354931.1 chr9 119884947 119885056 + miRNA NOVEL NA 110 110 1 ENSG00000261432.1 RP11-360A18.2 chr9 119935053 119937832 + lincRNA NOVEL OTTHUMG00000175687.1 2780 2780 1 ENSG00000225960.1 RP11-360A18.1 chr9 119973094 119974322 + lincRNA NOVEL OTTHUMG00000020570.1 1229 382 3 ENSG00000207814.1 MIR147A chr9 120244979 120245050 - miRNA KNOWN NA 72 72 1 ENSG00000280558.1 AL592549.1 chr9 120302782 120302882 - miRNA NOVEL NA 101 101 1 ENSG00000136861.16 CDK5RAP2 chr9 120388869 120580170 - protein_coding KNOWN OTTHUMG00000021043.3 191302 10080 302 ENSG00000106780.8 MEGF9 chr9 120600813 120714470 - protein_coding KNOWN OTTHUMG00000021039.1 113658 6298 6 ENSG00000223495.2 RP11-763B22.7 chr1 143498785 143499102 + processed_pseudogene KNOWN OTTHUMG00000040702.1 318 318 1 ENSG00000238181.2 AHCYP2 chr9 120720673 120721972 + processed_pseudogene KNOWN OTTHUMG00000020571.2 1300 1300 1 ENSG00000119402.15 FBXW2 chr9 120751978 120793412 - protein_coding KNOWN OTTHUMG00000020576.2 41435 11263 26 ENSG00000214654.6 RP11-27I1.4 chr9 120793551 120799570 + transcribed_processed_pseudogene KNOWN OTTHUMG00000020574.1 6020 1389 3 ENSG00000270917.1 RP11-27I1.6 chr9 120812475 120812845 - processed_pseudogene KNOWN OTTHUMG00000184660.1 371 371 1 ENSG00000095261.12 PSMD5 chr9 120815496 120842984 - protein_coding KNOWN OTTHUMG00000020573.4 27489 4432 35 ENSG00000226752.6 PSMD5-AS1 chr9 120824828 120854385 + antisense NOVEL OTTHUMG00000020572.5 29558 7181 53 ENSG00000119403.12 PHF19 chr9 120855652 120894896 - protein_coding KNOWN OTTHUMG00000020577.4 39245 6733 91 ENSG00000056558.9 TRAF1 chr9 120902393 120929173 - protein_coding KNOWN OTTHUMG00000020578.1 26781 6449 23 ENSG00000106804.7 C5 chr9 120952335 121050276 - protein_coding KNOWN OTTHUMG00000020579.3 97942 6533 56 ENSG00000119397.15 CNTRL chr9 121074863 121177610 + protein_coding KNOWN OTTHUMG00000020581.6 102748 9417 224 ENSG00000235887.2 RP11-763B22.6 chr1 143499187 143500512 - lincRNA NOVEL OTTHUMG00000040701.2 1326 408 3 ENSG00000119396.9 RAB14 chr9 121178137 121223014 - protein_coding KNOWN OTTHUMG00000020582.1 44878 4304 17 ENSG00000243738.3 RN7SL181P chr9 121203159 121203435 + misc_RNA KNOWN NA 277 277 1 ENSG00000148180.15 GSN chr9 121207794 121332843 + protein_coding KNOWN OTTHUMG00000020584.5 125050 11151 241 ENSG00000214651.4 RP11-477J21.2 chr9 121238117 121240089 - processed_pseudogene KNOWN OTTHUMG00000020585.2 1973 1463 2 ENSG00000239593.1 RP11-477J21.6 chr9 121279863 121282730 - antisense NOVEL OTTHUMG00000020588.1 2868 838 2 ENSG00000235865.2 GSN-AS1 chr9 121280768 121285530 - antisense NOVEL OTTHUMG00000020586.1 4763 4763 1 ENSG00000148175.11 STOM chr9 121338988 121370304 - protein_coding KNOWN OTTHUMG00000020590.1 31317 3198 16 ENSG00000280315.1 AL161784.1 chr9 121341347 121348132 + protein_coding KNOWN NA 6786 180 2 ENSG00000227355.1 RP11-162D16.2 chr9 121375241 121452177 + antisense NOVEL OTTHUMG00000020591.1 76937 440 3 ENSG00000204136.9 GGTA1P chr9 121444991 121500027 - unitary_pseudogene KNOWN OTTHUMG00000020592.4 55037 4501 35 ENSG00000264022.1 AC239859.1 chr1 143541645 143541710 - miRNA NOVEL NA 66 66 1 ENSG00000240299.3 RN7SL187P chr9 121494519 121494821 + misc_RNA KNOWN NA 303 303 1 ENSG00000213467.4 HMGB1P37 chr9 121519816 121520424 - processed_pseudogene KNOWN OTTHUMG00000020593.2 609 609 1 ENSG00000252940.2 AL357936.1 chr9 121539876 121539962 + miRNA NOVEL NA 87 87 1 ENSG00000136848.15 DAB2IP chr9 121567057 121785530 + protein_coding KNOWN OTTHUMG00000020595.3 218474 8408 85 ENSG00000229854.1 RP11-524G24.2 chr9 121574891 121576214 - antisense NOVEL OTTHUMG00000020594.1 1324 662 2 ENSG00000274557.1 AL365274.1 chr9 121790455 121790522 - miRNA NOVEL NA 68 68 1 ENSG00000261534.1 RP11-244O19.1 chr9 121815674 121819452 - sense_overlapping NOVEL OTTHUMG00000175795.1 3779 3779 1 ENSG00000175764.13 TTLL11 chr9 121821928 122093606 - protein_coding KNOWN OTTHUMG00000020597.4 271679 3535 35 ENSG00000237548.1 TTLL11-IT1 chr9 121884636 121963719 - lincRNA KNOWN OTTHUMG00000020596.2 79084 1052 2 ENSG00000266583.1 MIR4478 chr9 122120082 122120167 - miRNA KNOWN NA 86 86 1 ENSG00000203825.4 RP11-744H18.1 chr1 143541768 143572834 + unprocessed_pseudogene KNOWN OTTHUMG00000041565.2 31067 2594 17 ENSG00000119421.6 NDUFA8 chr9 122144058 122159819 - protein_coding KNOWN OTTHUMG00000020598.1 15762 844 4 ENSG00000185681.11 MORN5 chr9 122159908 122200088 + protein_coding KNOWN OTTHUMG00000020599.2 40181 868 18 ENSG00000106852.14 LHX6 chr9 122202577 122229626 - protein_coding KNOWN OTTHUMG00000020601.7 27050 5748 69 ENSG00000119446.12 RBM18 chr9 122237624 122264839 - protein_coding KNOWN OTTHUMG00000020602.2 27216 5193 17 ENSG00000148187.16 MRRF chr9 122264603 122331343 + protein_coding KNOWN OTTHUMG00000020600.6 66741 11041 75 ENSG00000095303.13 PTGS1 chr9 122370530 122395703 + protein_coding KNOWN OTTHUMG00000020605.1 25174 5790 71 ENSG00000269970.1 RP11-498E2.9 chr9 122372605 122372825 + sense_intronic NOVEL OTTHUMG00000183935.1 221 221 1 ENSG00000233616.2 RP11-542K23.10 chr9 122400970 122402906 - lincRNA NOVEL OTTHUMG00000020610.2 1937 301 2 ENSG00000229245.2 RP11-542K23.7 chr9 122403407 122448977 + antisense NOVEL OTTHUMG00000020611.2 45571 522 6 ENSG00000231465.2 RP11-542K23.9 chr9 122471358 122475817 + antisense NOVEL OTTHUMG00000020612.2 4460 259 3 ENSG00000179571.10 NBPF17P chr1 143595216 143635641 - unprocessed_pseudogene KNOWN OTTHUMG00000041567.3 40426 2119 16 ENSG00000136834.3 OR1J1 chr9 122476958 122477926 - protein_coding KNOWN OTTHUMG00000020603.1 969 969 1 ENSG00000197233.7 OR1J2 chr9 122510802 122511743 + protein_coding KNOWN OTTHUMG00000020604.1 942 942 1 ENSG00000239590.1 OR1J4 chr9 122519141 122520082 + protein_coding KNOWN OTTHUMG00000020606.1 942 942 1 ENSG00000171505.5 OR1N1 chr9 122526358 122527296 - protein_coding KNOWN OTTHUMG00000020608.1 939 939 2 ENSG00000171501.8 OR1N2 chr9 122553112 122555173 + protein_coding KNOWN OTTHUMG00000020607.2 2062 1115 3 ENSG00000171496.3 OR1L8 chr9 122567548 122568477 - protein_coding KNOWN OTTHUMG00000020609.1 930 930 1 ENSG00000228914.1 OR1H1P chr9 122608036 122608800 + unprocessed_pseudogene KNOWN OTTHUMG00000020613.2 765 765 1 ENSG00000234156.1 RP11-64P14.7 chr9 122609915 122639685 + antisense NOVEL OTTHUMG00000020614.1 29771 636 7 ENSG00000165202.3 OR1Q1 chr9 122614738 122615682 + protein_coding KNOWN OTTHUMG00000020615.1 945 945 1 ENSG00000171484.4 OR1B1 chr9 122628579 122629535 - protein_coding KNOWN NA 957 957 1 ENSG00000226028.2 PFN1P12 chr1 143619994 143620527 + processed_pseudogene KNOWN OTTHUMG00000041569.1 534 534 1 ENSG00000280094.1 OR1B1 chr9 122628579 122629573 - polymorphic_pseudogene KNOWN OTTHUMG00000020616.3 995 995 2 ENSG00000173679.2 OR1L1 chr9 122661566 122662648 + protein_coding KNOWN OTTHUMG00000020618.1 1083 1083 2 ENSG00000171481.3 OR1L3 chr9 122675130 122676104 + protein_coding KNOWN OTTHUMG00000020619.1 975 975 1 ENSG00000226783.1 TLK1P1 chr9 122685933 122688372 + processed_pseudogene KNOWN OTTHUMG00000020623.1 2440 2440 1 ENSG00000136939.1 OR1L4 chr9 122723990 122724925 + protein_coding KNOWN OTTHUMG00000020620.1 936 936 1 ENSG00000171459.3 OR1L6 chr9 122749740 122750783 + protein_coding KNOWN OTTHUMG00000020621.3 1044 1044 2 ENSG00000232387.2 SKA2P1 chr9 122761844 122762233 + processed_pseudogene KNOWN OTTHUMG00000020617.2 390 390 1 ENSG00000148215.4 OR5C1 chr9 122788933 122789895 + protein_coding KNOWN OTTHUMG00000020622.1 963 963 1 ENSG00000136940.12 PDCL chr9 122798389 122828631 - protein_coding KNOWN OTTHUMG00000020624.1 30243 3147 10 ENSG00000165204.3 OR1K1 chr9 122800123 122801073 + protein_coding KNOWN OTTHUMG00000020625.1 951 951 1 ENSG00000202167.1 RNU1-114P chr1 143652050 143652215 - snRNA KNOWN NA 166 166 1 ENSG00000233425.1 KRT18P67 chr9 122837557 122838820 + processed_pseudogene KNOWN OTTHUMG00000020626.1 1264 1264 1 ENSG00000056586.14 RC3H2 chr9 122844556 122905341 - protein_coding KNOWN OTTHUMG00000020632.2 60786 11545 110 ENSG00000212447.1 SNORD90 chr9 122880213 122880323 - snoRNA KNOWN NA 111 111 1 ENSG00000186130.4 ZBTB6 chr9 122908056 122913330 - protein_coding KNOWN OTTHUMG00000020628.1 5275 4106 2 ENSG00000171448.8 ZBTB26 chr9 122915566 122931500 - protein_coding KNOWN OTTHUMG00000020627.1 15935 4645 4 ENSG00000261094.2 RP11-355O1.11 chr9 122937623 122940333 + sense_overlapping NOVEL OTTHUMG00000175504.3 2711 2674 3 ENSG00000011454.15 RABGAP1 chr9 122940833 123104866 + protein_coding KNOWN OTTHUMG00000020633.4 164034 9162 98 ENSG00000222351.1 RNY1P15 chr9 122945988 122946094 - misc_RNA KNOWN NA 107 107 1 ENSG00000213216.2 RP11-355O1.7 chr9 123029373 123029753 - processed_pseudogene KNOWN OTTHUMG00000020630.2 381 381 1 ENSG00000188394.6 GPR21 chr9 123034527 123035696 + protein_coding KNOWN OTTHUMG00000020631.1 1170 1170 1 ENSG00000252254.1 Y_RNA chr1 8328067 8328179 + misc_RNA NOVEL NA 113 113 1 ENSG00000207349.1 RNVU1-17 chr1 143699456 143699619 - snRNA KNOWN NA 164 164 1 ENSG00000225078.2 RP11-123N4.4 chr9 123061845 123063312 - processed_pseudogene KNOWN OTTHUMG00000020634.2 1468 858 3 ENSG00000236901.4 MIR600HG chr9 123109494 123115477 - sense_intronic KNOWN OTTHUMG00000020635.2 5984 5984 2 ENSG00000165209.17 STRBP chr9 123109500 123268576 - protein_coding KNOWN OTTHUMG00000020636.3 159077 8097 96 ENSG00000274325.1 MIR600 chr9 123111546 123111643 - miRNA KNOWN NA 98 98 1 ENSG00000148204.10 CRB2 chr9 123356170 123380324 + protein_coding KNOWN OTTHUMG00000020638.6 24155 6349 32 ENSG00000119522.14 DENND1A chr9 123379654 123930152 - protein_coding KNOWN OTTHUMG00000020643.1 550499 10256 158 ENSG00000207991.1 MIR601 chr9 123402525 123402603 - miRNA KNOWN NA 79 79 1 ENSG00000274932.1 MIR7150 chr9 123485529 123485622 - miRNA KNOWN NA 94 94 1 ENSG00000237336.1 RP11-230L22.4 chr9 123491884 123493156 + antisense NOVEL OTTHUMG00000020639.1 1273 722 2 ENSG00000222722.1 AL161790.1 chr9 123585384 123585457 - miRNA NOVEL NA 74 74 1 ENSG00000252826.1 RNU1-92P chr1 143720510 143720644 - snRNA KNOWN NA 135 135 1 ENSG00000230826.1 RP11-417B4.2 chr9 123736437 123751941 + antisense NOVEL OTTHUMG00000020640.1 15505 788 2 ENSG00000229115.1 RP11-417B4.3 chr9 123759220 123759775 + processed_pseudogene KNOWN OTTHUMG00000020641.1 556 246 2 ENSG00000281130.1 U7 chr9 123842422 123842479 + snRNA NOVEL NA 58 58 1 ENSG00000234881.1 PIGFP2 chr9 123843036 123843686 + processed_pseudogene KNOWN OTTHUMG00000020642.1 651 651 1 ENSG00000106689.9 LHX2 chr9 124001670 124033301 + protein_coding KNOWN OTTHUMG00000020647.4 31632 2655 17 ENSG00000236668.2 RP11-85O21.2 chr9 124006277 124009396 - antisense NOVEL OTTHUMG00000020644.2 3120 2146 2 ENSG00000231227.1 RP11-85O21.4 chr9 124010530 124011114 + sense_overlapping NOVEL OTTHUMG00000020646.1 585 460 2 ENSG00000234921.1 RP11-85O21.5 chr9 124031624 124032524 - antisense NOVEL OTTHUMG00000020645.1 901 581 3 ENSG00000119408.15 NEK6 chr9 124257606 124353307 + protein_coding KNOWN OTTHUMG00000020650.1 95702 4419 132 ENSG00000235204.1 RP11-121A14.2 chr9 124259250 124261156 - antisense NOVEL OTTHUMG00000020648.1 1907 308 2 ENSG00000277331.1 AC239800.1 chr1 143729192 143729268 + miRNA NOVEL NA 77 77 1 ENSG00000227200.1 RP11-121A14.3 chr9 124262876 124265809 + sense_intronic NOVEL OTTHUMG00000020649.1 2934 373 2 ENSG00000136930.11 PSMB7 chr9 124353466 124415444 - protein_coding KNOWN OTTHUMG00000021042.1 61979 1787 31 ENSG00000180264.9 GPR144 chr9 124451600 124478589 + protein_coding KNOWN OTTHUMG00000020652.3 26990 5546 33 ENSG00000136931.8 NR5A1 chr9 124481236 124507430 - protein_coding KNOWN OTTHUMG00000020655.1 26195 3422 22 ENSG00000231149.2 RP11-10J18.3 chr9 124514938 124516056 - lincRNA NOVEL OTTHUMG00000020654.2 1119 266 2 ENSG00000148200.15 NR6A1 chr9 124517275 124771310 - protein_coding KNOWN OTTHUMG00000020661.5 254036 7124 45 ENSG00000231744.1 RP11-164H5.1 chr9 124598707 124599580 - processed_pseudogene KNOWN OTTHUMG00000020656.1 874 607 2 ENSG00000241246.3 RN7SL302P chr9 124607159 124607458 + misc_RNA KNOWN NA 300 300 1 ENSG00000224020.1 MIR181A2HG chr9 124658467 124698631 + antisense KNOWN OTTHUMG00000020657.1 40165 662 2 ENSG00000207595.1 MIR181A2 chr9 124692442 124692551 + miRNA KNOWN NA 110 110 1 ENSG00000206737.1 RNVU1-18 chr1 143729407 143729570 - snRNA KNOWN NA 164 164 1 ENSG00000207737.1 MIR181B2 chr9 124693710 124693798 + miRNA KNOWN NA 89 89 1 ENSG00000236643.1 RP11-175D17.3 chr9 124770123 124772927 + antisense NOVEL OTTHUMG00000020662.1 2805 617 3 ENSG00000185585.18 OLFML2A chr9 124777158 124814885 + protein_coding KNOWN OTTHUMG00000020663.2 37728 6746 18 ENSG00000136918.6 WDR38 chr9 124853417 124857890 + protein_coding KNOWN OTTHUMG00000020664.1 4474 1387 26 ENSG00000136942.13 RPL35 chr9 124857880 124861981 - protein_coding KNOWN OTTHUMG00000020659.4 4102 1535 23 ENSG00000136950.12 ARPC5L chr9 124862130 124877733 + protein_coding KNOWN OTTHUMG00000020660.2 15604 3610 13 ENSG00000136935.12 GOLGA1 chr9 124878357 124948492 - protein_coding KNOWN OTTHUMG00000020665.6 70136 6019 60 ENSG00000199313.1 RNU4-82P chr9 124887410 124887549 - snRNA KNOWN NA 140 140 1 ENSG00000264641.1 AL354928.1 chr9 124896833 124896932 + miRNA NOVEL NA 100 100 1 ENSG00000173611.16 SCAI chr9 124942608 125143506 - protein_coding KNOWN OTTHUMG00000020667.4 200899 13014 72 ENSG00000232721.2 RP11-403I13.5 chr1 143736066 143739506 + lincRNA NOVEL OTTHUMG00000041573.2 3441 2675 2 ENSG00000177736.4 RP11-474P12.3 chr9 124968294 124968840 - processed_pseudogene KNOWN OTTHUMG00000020666.2 547 547 1 ENSG00000119414.10 PPP6C chr9 125146573 125189939 - protein_coding KNOWN OTTHUMG00000020671.1 43367 4443 27 ENSG00000232630.1 PRPS1P2 chr9 125150653 125151589 + processed_pseudogene KNOWN OTTHUMG00000020669.1 937 937 1 ENSG00000235332.2 RP11-366O20.5 chr9 125194649 125195821 - processed_pseudogene KNOWN OTTHUMG00000020670.2 1173 853 2 ENSG00000136933.15 RABEPK chr9 125200542 125234158 + protein_coding KNOWN OTTHUMG00000020674.1 33617 3401 46 ENSG00000044574.7 HSPA5 chr9 125234853 125241330 - protein_coding KNOWN OTTHUMG00000020672.1 6478 3908 8 ENSG00000239705.1 RP11-65N13.8 chr9 125241663 125257018 + antisense NOVEL OTTHUMG00000159480.1 15356 550 3 ENSG00000165219.20 GAPVD1 chr9 125261794 125367207 + protein_coding KNOWN OTTHUMG00000020678.8 105414 13625 297 ENSG00000214593.3 RP11-65N13.6 chr9 125263845 125264090 - processed_pseudogene KNOWN OTTHUMG00000020676.1 246 246 1 ENSG00000200554.1 RNU6-1020P chr9 125303920 125304026 - snRNA KNOWN NA 107 107 1 ENSG00000223779.5 RP11-403I13.4 chr1 143745249 143757452 + unprocessed_pseudogene KNOWN OTTHUMG00000041572.5 12204 719 6 ENSG00000227845.2 RP11-184B22.2 chr9 125372325 125372766 - processed_pseudogene KNOWN OTTHUMG00000020679.2 442 442 1 ENSG00000274510.1 Metazoa_SRP chr9 125417305 125417586 + misc_RNA NOVEL NA 282 282 1 ENSG00000119487.15 MAPKAP1 chr9 125437393 125707234 - protein_coding KNOWN OTTHUMG00000020683.6 269842 6741 136 ENSG00000243845.3 RN7SL30P chr9 125512902 125513207 - misc_RNA KNOWN NA 306 306 1 ENSG00000227068.1 RP11-12A16.3 chr9 125567579 125573023 + antisense NOVEL OTTHUMG00000020681.1 5445 633 3 ENSG00000214761.3 HNRNPA1P15 chr9 125595669 125596628 + processed_pseudogene KNOWN OTTHUMG00000020680.1 960 960 1 ENSG00000229582.3 RP11-423C15.3 chr9 125743754 125746552 - processed_transcript NOVEL OTTHUMG00000020682.2 2799 2390 4 ENSG00000167081.15 PBX3 chr9 125747345 125967377 + protein_coding KNOWN OTTHUMG00000020684.3 220033 4529 72 ENSG00000232413.1 RP11-343J18.2 chr9 126057580 126159613 + lincRNA NOVEL OTTHUMG00000020685.1 102034 316 2 ENSG00000228392.1 RP11-343J18.1 chr9 126270121 126275918 - lincRNA NOVEL OTTHUMG00000020686.1 5798 2102 3 ENSG00000242352.2 FAM91A3P chr1 143766540 143769083 + transcribed_processed_pseudogene KNOWN OTTHUMG00000041566.3 2544 2544 1 ENSG00000196814.13 MVB12B chr9 126326849 126507041 + protein_coding KNOWN OTTHUMG00000020687.2 180193 7884 30 ENSG00000253079.1 NRON chr9 126408041 126408410 - misc_RNA KNOWN NA 370 370 1 ENSG00000252985.1 SNORD116 chr9 126426893 126426970 + snoRNA NOVEL NA 78 78 1 ENSG00000233721.1 RP11-205K6.1 chr9 126516417 126518808 + lincRNA NOVEL OTTHUMG00000020688.1 2392 719 2 ENSG00000279137.1 RP11-205K6.3 chr9 126518840 126520773 + TEC KNOWN OTTHUMG00000175455.1 1934 1934 1 ENSG00000226078.1 RP11-205K6.2 chr9 126527618 126530343 + lincRNA NOVEL OTTHUMG00000020689.1 2726 339 2 ENSG00000221768.1 AL356309.1 chr9 126530915 126530991 - miRNA NOVEL NA 77 77 1 ENSG00000221173.1 AL161908.1 chr9 126576530 126576630 - miRNA NOVEL NA 101 101 1 ENSG00000224842.2 RP11-123K19.1 chr9 126589594 126613700 - antisense NOVEL OTTHUMG00000020690.2 24107 943 8 ENSG00000136944.16 LMX1B chr9 126614443 126701032 + protein_coding KNOWN OTTHUMG00000020692.5 86590 5830 32 ENSG00000270962.1 RP11-403I13.10 chr1 143784376 143784671 + processed_pseudogene KNOWN OTTHUMG00000184374.1 296 296 1 ENSG00000238010.1 RP11-123K19.2 chr9 126640756 126641293 + sense_intronic NOVEL OTTHUMG00000020691.1 538 394 2 ENSG00000266403.1 AL161731.1 chr9 126718243 126718333 - miRNA NOVEL NA 91 91 1 ENSG00000169155.8 ZBTB43 chr9 126805006 126838210 + protein_coding KNOWN OTTHUMG00000020693.1 33205 7052 9 ENSG00000177125.5 ZBTB34 chr9 126860665 126885878 + protein_coding KNOWN OTTHUMG00000020694.1 25214 6606 3 ENSG00000136828.17 RALGPS1 chr9 126914774 127223166 + protein_coding KNOWN OTTHUMG00000020696.2 308393 10507 126 ENSG00000136859.8 ANGPTL2 chr9 127087332 127122883 - protein_coding KNOWN OTTHUMG00000020695.1 35552 3889 13 ENSG00000228487.2 RP13-225O21.2 chr9 127213783 127221907 - antisense NOVEL OTTHUMG00000020697.2 8125 649 5 ENSG00000136895.17 GARNL3 chr9 127224265 127393660 + protein_coding KNOWN OTTHUMG00000020700.8 169396 9695 202 ENSG00000229369.1 RP13-225O21.5 chr9 127300093 127300982 - processed_pseudogene KNOWN OTTHUMG00000020699.1 890 589 2 ENSG00000271833.1 RP11-356B19.11 chr9 127366770 127367397 + sense_intronic NOVEL OTTHUMG00000185720.1 628 628 1 ENSG00000263590.2 RP11-403I13.7 chr1 143790010 143797108 + lincRNA NOVEL OTTHUMG00000041568.3 7099 5243 2 ENSG00000136856.16 SLC2A8 chr9 127397138 127408424 + protein_coding KNOWN OTTHUMG00000020702.4 11287 3928 87 ENSG00000196152.9 ZNF79 chr9 127424374 127445372 + protein_coding KNOWN OTTHUMG00000020703.1 20999 2302 19 ENSG00000197958.11 RPL12 chr9 127447674 127451405 - protein_coding KNOWN OTTHUMG00000020704.1 3732 2452 26 ENSG00000201302.1 SNORA65 chr9 127448501 127448630 - snoRNA KNOWN NA 130 130 1 ENSG00000148356.12 LRSAM1 chr9 127451486 127503501 + protein_coding KNOWN OTTHUMG00000020701.2 52016 4365 142 ENSG00000200788.1 Y_RNA chr9 127470875 127470987 + misc_RNA NOVEL NA 113 113 1 ENSG00000136830.10 FAM129B chr9 127505339 127578989 - protein_coding KNOWN OTTHUMG00000020705.2 73651 4629 47 ENSG00000136854.16 STXBP1 chr9 127611760 127692936 + protein_coding KNOWN OTTHUMG00000020713.5 81177 6650 100 ENSG00000279571.1 RP11-56D16.8 chr9 127690098 127690840 - lincRNA NOVEL OTTHUMG00000189321.1 743 743 1 ENSG00000264329.1 MIR3911 chr9 127690687 127690795 - miRNA KNOWN NA 109 109 1 ENSG00000252105.1 RNU1-143P chr1 143791542 143791687 - snRNA KNOWN NA 146 146 1 ENSG00000187024.12 PTRH1 chr9 127692978 127724873 - protein_coding KNOWN OTTHUMG00000020710.6 31896 3595 32 ENSG00000160401.13 C9orf117 chr9 127706989 127716002 + protein_coding KNOWN OTTHUMG00000020709.3 9014 4703 33 ENSG00000167094.14 TTC16 chr9 127716066 127731600 + protein_coding KNOWN OTTHUMG00000020711.1 15535 6370 28 ENSG00000160404.16 TOR2A chr9 127731524 127735317 - protein_coding KNOWN OTTHUMG00000020706.2 3794 3794 28 ENSG00000095370.18 SH2D3C chr9 127738317 127778741 - protein_coding KNOWN OTTHUMG00000020717.4 40425 4659 97 ENSG00000279363.1 AL162426.1 chr9 127742855 127743407 + protein_coding KNOWN NA 553 54 2 ENSG00000136807.10 CDK9 chr9 127785679 127790787 + protein_coding KNOWN OTTHUMG00000020715.2 5109 3000 21 ENSG00000266070.1 MIR3960 chr9 127785833 127785923 + miRNA KNOWN NA 91 91 1 ENSG00000281546.1 AL162586.1 chr9 127785836 127785905 + miRNA NOVEL NA 70 70 1 ENSG00000136877.13 FPGS chr9 127794597 127814327 + protein_coding KNOWN OTTHUMG00000020716.4 19731 3931 186 ENSG00000142599.16 RERE chr1 8352397 8817643 - protein_coding KNOWN OTTHUMG00000001765.5 465247 11503 146 ENSG00000233430.3 RP11-403I13.9 chr1 143811359 143825837 - unprocessed_pseudogene KNOWN OTTHUMG00000041633.4 14479 1176 6 ENSG00000106991.12 ENG chr9 127815012 127854756 - protein_coding KNOWN OTTHUMG00000020723.1 39745 3935 51 ENSG00000225032.4 RP11-228B15.4 chr9 127816066 127822520 + antisense NOVEL OTTHUMG00000020714.1 6455 2247 9 ENSG00000222421.1 Y_RNA chr9 127832635 127832743 - misc_RNA NOVEL NA 109 109 1 ENSG00000280697.1 Y_RNA chr9 127833951 127834042 - misc_RNA NOVEL NA 92 92 1 ENSG00000222455.1 RNA5SP296 chr9 127841112 127841222 - rRNA KNOWN NA 111 111 1 ENSG00000106992.16 AK1 chr9 127866480 127877743 - protein_coding KNOWN OTTHUMG00000020722.8 11264 2667 34 ENSG00000257524.4 RP11-203J24.9 chr9 127867864 127886787 - processed_transcript NOVEL OTTHUMG00000169436.1 18924 1160 12 ENSG00000263979.1 MIR4672 chr9 127869415 127869495 - miRNA KNOWN NA 81 81 1 ENSG00000160408.13 ST6GALNAC6 chr9 127885321 127905408 - protein_coding KNOWN OTTHUMG00000020718.4 20088 5307 81 ENSG00000136840.17 ST6GALNAC4 chr9 127907886 127917038 - protein_coding KNOWN OTTHUMG00000020724.3 9153 2630 26 ENSG00000239006.2 AC239798.1 chr1 143828767 143828863 - miRNA NOVEL NA 97 97 1 ENSG00000167103.10 PIP5KL1 chr9 127920879 127930797 - protein_coding KNOWN OTTHUMG00000020719.4 9919 3341 62 ENSG00000227218.6 RP11-203J24.8 chr9 127934503 127940952 + antisense NOVEL OTTHUMG00000020721.3 6450 2520 28 ENSG00000136908.16 DPM2 chr9 127935099 127938484 - protein_coding KNOWN OTTHUMG00000020725.2 3386 3133 15 ENSG00000167106.10 FAM102A chr9 127940579 127980513 - protein_coding KNOWN OTTHUMG00000020720.4 39935 6100 40 ENSG00000230848.1 RP11-379C10.1 chr9 128039135 128057362 - antisense NOVEL OTTHUMG00000020726.1 18228 380 2 ENSG00000171169.8 NAIF1 chr9 128061233 128068206 - protein_coding KNOWN OTTHUMG00000020727.2 6974 3621 8 ENSG00000148339.11 SLC25A25 chr9 128068201 128109245 + protein_coding KNOWN OTTHUMG00000020736.2 41045 4936 65 ENSG00000230536.1 RP11-379C10.4 chr9 128090969 128094457 - antisense NOVEL OTTHUMG00000020728.1 3489 765 2 ENSG00000234771.3 SLC25A25-AS1 chr9 128108581 128118693 - antisense NOVEL OTTHUMG00000020737.2 10113 6391 5 ENSG00000148334.13 PTGES2 chr9 128120693 128128462 - protein_coding KNOWN OTTHUMG00000020730.2 7770 3039 81 ENSG00000237503.2 RP5-998N21.3 chr1 143846097 143846504 - processed_pseudogene KNOWN OTTHUMG00000041031.2 408 408 1 ENSG00000232850.3 PTGES2-AS1 chr9 128128529 128130628 + lincRNA KNOWN OTTHUMG00000187229.2 2100 2100 1 ENSG00000148346.10 LCN2 chr9 128149071 128153455 + protein_coding KNOWN OTTHUMG00000020734.1 4385 1598 39 ENSG00000171159.4 C9orf16 chr9 128160260 128163928 + protein_coding KNOWN OTTHUMG00000020731.1 3669 1662 11 ENSG00000281669.1 Metazoa_SRP chr9 128165104 128165375 + misc_RNA NOVEL NA 272 272 1 ENSG00000148337.18 CIZ1 chr9 128166064 128204383 - protein_coding KNOWN OTTHUMG00000020735.3 38320 4916 242 ENSG00000106976.17 DNM1 chr9 128203352 128255248 + protein_coding KNOWN OTTHUMG00000020733.9 51897 8851 227 ENSG00000207581.1 MIR199B chr9 128244721 128244830 - miRNA KNOWN NA 110 110 1 ENSG00000264823.2 AL590708.2 chr9 128244936 128245047 - miRNA NOVEL NA 112 112 1 ENSG00000167110.15 GOLGA2 chr9 128255829 128275995 - protein_coding KNOWN OTTHUMG00000020732.9 20167 6961 141 ENSG00000221297.1 AL590708.1 chr9 128257707 128257789 - miRNA NOVEL NA 83 83 1 ENSG00000265531.2 FCGR1C chr1 143874793 143883575 + unprocessed_pseudogene KNOWN OTTHUMG00000156231.4 8783 843 5 ENSG00000280459.1 Metazoa_SRP chr9 128258709 128258955 - misc_RNA NOVEL NA 247 247 1 ENSG00000274982.1 AL590708.3 chr9 128260749 128260817 - miRNA NOVEL NA 69 69 1 ENSG00000175854.10 SWI5 chr9 128275379 128288990 + protein_coding KNOWN OTTHUMG00000020729.3 13612 1649 30 ENSG00000167112.9 TRUB2 chr9 128305161 128322742 - protein_coding KNOWN OTTHUMG00000020741.2 17582 6125 19 ENSG00000281892.1 Metazoa_SRP chr9 128314614 128314876 - misc_RNA NOVEL NA 263 263 1 ENSG00000272696.1 RP11-339B21.13 chr9 128316337 128316909 + antisense NOVEL OTTHUMG00000185895.1 573 573 1 ENSG00000167113.9 COQ4 chr9 128322536 128334072 + protein_coding KNOWN OTTHUMG00000020743.2 11537 4814 18 ENSG00000167114.11 SLC27A4 chr9 128340646 128361470 + protein_coding KNOWN OTTHUMG00000020746.2 20825 3110 19 ENSG00000223551.1 TMSB4XP4 chr9 128342153 128342770 + processed_pseudogene KNOWN OTTHUMG00000020739.1 618 618 1 ENSG00000167118.9 URM1 chr9 128371319 128392016 + protein_coding KNOWN OTTHUMG00000020742.5 20698 4410 23 ENSG00000240929.2 HIST2H2BB chr1 143875171 143904650 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000012093.4 29480 567 3 ENSG00000272593.1 RP11-339B21.11 chr9 128391461 128392016 + lincRNA NOVEL OTTHUMG00000185896.1 556 556 1 ENSG00000207955.3 MIR219A2 chr9 128392007 128393510 - lincRNA NOVEL OTTHUMG00000185897.2 1504 1504 1 ENSG00000273685.1 MIR219B chr9 128392618 128392714 - miRNA KNOWN NA 97 97 1 ENSG00000167123.17 CERCAM chr9 128411751 128437351 + protein_coding KNOWN OTTHUMG00000020747.4 25601 6059 93 ENSG00000273186.1 RP11-339B21.10 chr9 128431598 128432006 + sense_intronic NOVEL OTTHUMG00000185898.1 409 409 1 ENSG00000228510.2 RP11-339B21.8 chr9 128444587 128446628 + processed_pseudogene KNOWN OTTHUMG00000020744.2 2042 1734 2 ENSG00000136811.15 ODF2 chr9 128455186 128501292 + protein_coding KNOWN OTTHUMG00000020748.5 46107 6393 259 ENSG00000225951.1 ODF2-AS1 chr9 128468957 128473012 - antisense NOVEL OTTHUMG00000020745.1 4056 407 2 ENSG00000264891.1 AL359091.1 chr9 128476905 128476996 + miRNA NOVEL NA 92 92 1 ENSG00000119392.13 GLE1 chr9 128504700 128542288 + protein_coding KNOWN OTTHUMG00000020749.1 37589 3527 36 ENSG00000234571.1 RP5-998N21.4 chr1 143877731 143885076 - lincRNA NOVEL OTTHUMG00000041032.2 7346 3540 2 ENSG00000228395.1 RP11-216B9.6 chr9 128528901 128552410 - antisense NOVEL OTTHUMG00000020752.1 23510 1242 6 ENSG00000238406.1 RNU7-171P chr9 128543916 128543977 + snRNA KNOWN NA 62 62 1 ENSG00000197694.12 SPTAN1 chr9 128552558 128633662 + protein_coding KNOWN OTTHUMG00000020754.7 81105 15023 371 ENSG00000280474.1 RP11-216B9.8 chr9 128595893 128596633 + sense_intronic NOVEL OTTHUMG00000189752.1 741 528 2 ENSG00000280758.1 RP11-216B9.9 chr9 128630328 128631685 - antisense NOVEL OTTHUMG00000189753.1 1358 575 2 ENSG00000119333.10 WDR34 chr9 128633661 128656787 - protein_coding KNOWN OTTHUMG00000020750.2 23127 2604 27 ENSG00000227759.2 VTI1BP4 chr9 128650998 128652145 + processed_pseudogene KNOWN OTTHUMG00000020751.2 1148 527 3 ENSG00000234705.1 HMGA1P4 chr9 128663134 128663578 - antisense NOVEL OTTHUMG00000020753.1 445 334 2 ENSG00000119335.15 SET chr9 128683424 128696400 + protein_coding KNOWN OTTHUMG00000020755.2 12977 4355 62 ENSG00000160447.6 PKN3 chr9 128702523 128720918 + protein_coding KNOWN OTTHUMG00000020757.1 18396 3375 35 ENSG00000273213.1 RP5-998N21.10 chr1 143904301 143905964 - processed_transcript NOVEL OTTHUMG00000186366.1 1664 700 2 ENSG00000264438.2 RN7SL560P chr9 128709780 128710043 + misc_RNA KNOWN NA 264 264 1 ENSG00000160446.17 ZDHHC12 chr9 128720869 128724127 - protein_coding KNOWN OTTHUMG00000020756.3 3259 2597 23 ENSG00000223478.1 RP11-545E17.3 chr9 128724445 128733194 + antisense NOVEL OTTHUMG00000020758.1 8750 544 2 ENSG00000160445.9 ZER1 chr9 128729786 128772414 - protein_coding KNOWN OTTHUMG00000020759.1 42629 4370 26 ENSG00000203286.5 Metazoa_SRP chr9 128745857 128746138 - misc_RNA NOVEL NA 282 282 1 ENSG00000107021.14 TBC1D13 chr9 128787204 128810432 + protein_coding KNOWN OTTHUMG00000020760.1 23229 3982 37 ENSG00000167136.6 ENDOG chr9 128818474 128822677 + protein_coding KNOWN OTTHUMG00000020763.1 4204 1172 3 ENSG00000198917.10 C9orf114 chr9 128819651 128829821 - protein_coding KNOWN OTTHUMG00000020762.2 10171 4593 47 ENSG00000171097.12 CCBL1 chr9 128832942 128882494 - protein_coding KNOWN OTTHUMG00000020767.3 49553 3624 94 ENSG00000136802.10 LRRC8A chr9 128882112 128918039 + protein_coding KNOWN OTTHUMG00000020766.3 35928 5230 15 ENSG00000230186.3 RP5-998N21.7 chr1 143905487 143934776 + antisense NOVEL OTTHUMG00000041027.2 29290 494 4 ENSG00000175287.17 PHYHD1 chr9 128920895 128942041 + protein_coding KNOWN OTTHUMG00000020764.18 21147 2915 106 ENSG00000251184.1 RP11-101E3.5 chr9 128941478 128957021 + protein_coding PUTATIVE OTTHUMG00000166431.2 15544 378 5 ENSG00000175283.7 DOLK chr9 128945530 128947619 - protein_coding KNOWN OTTHUMG00000020765.1 2090 2090 1 ENSG00000095319.13 NUP188 chr9 128947699 129007096 + protein_coding KNOWN OTTHUMG00000020768.7 59398 8041 95 ENSG00000267834.1 RP11-167N5.5 chr9 129004502 129004998 - lincRNA NOVEL OTTHUMG00000183018.1 497 497 1 ENSG00000148341.16 SH3GLB2 chr9 129007036 129028303 - protein_coding KNOWN OTTHUMG00000020769.7 21268 6814 98 ENSG00000148343.17 FAM73B chr9 129036621 129072082 + protein_coding KNOWN OTTHUMG00000020770.9 35462 6302 82 ENSG00000280692.1 AL592211.1 chr9 129040566 129040674 + miRNA NOVEL NA 109 109 1 ENSG00000167130.16 DOLPP1 chr9 129081100 129090438 + protein_coding KNOWN OTTHUMG00000020771.8 9339 2249 29 ENSG00000095321.15 CRAT chr9 129094810 129111189 - protein_coding KNOWN OTTHUMG00000147343.5 16380 3803 59 ENSG00000203818.6 HIST2H3PS2 chr1 143905555 143905966 - protein_coding KNOWN OTTHUMG00000041033.3 412 412 1 ENSG00000234055.1 RP11-247A12.1 chr9 129097854 129100266 + antisense NOVEL OTTHUMG00000046129.3 2413 241 2 ENSG00000221521.1 AL158151.2 chr9 129107050 129107151 - miRNA NOVEL NA 102 102 1 ENSG00000119383.18 PPP2R4 chr9 129110950 129148946 + protein_coding KNOWN OTTHUMG00000020774.21 37997 5624 152 ENSG00000268707.1 RP11-247A12.7 chr9 129170434 129170940 + lincRNA NOVEL OTTHUMG00000183019.1 507 507 1 ENSG00000188483.7 IER5L chr9 129175552 129178262 - protein_coding KNOWN OTTHUMG00000020773.2 2711 2711 1 ENSG00000268050.2 RP11-247A12.8 chr9 129175807 129177575 + antisense NOVEL OTTHUMG00000183020.2 1769 696 3 ENSG00000204055.4 RP11-247A12.2 chr9 129176771 129210548 + antisense NOVEL OTTHUMG00000046130.3 33778 2288 4 ENSG00000220992.1 AL158151.1 chr9 129230572 129230717 - miRNA NOVEL NA 146 146 1 ENSG00000235007.2 RP11-344B5.4 chr9 129258354 129259846 + lincRNA NOVEL OTTHUMG00000020777.2 1493 966 3 ENSG00000241084.1 RP11-344B5.3 chr9 129259062 129261581 + lincRNA NOVEL OTTHUMG00000020776.1 2520 395 2 ENSG00000268074.1 RPL22P5 chr1 143929994 143930382 - processed_pseudogene KNOWN OTTHUMG00000041028.2 389 389 1 ENSG00000224307.1 RP11-344B5.2 chr9 129282458 129285728 + lincRNA NOVEL OTTHUMG00000020775.2 3271 583 3 ENSG00000179082.3 C9orf106 chr9 129321016 129324905 + lincRNA KNOWN OTTHUMG00000020781.2 3890 3145 2 ENSG00000268615.1 RP11-65J3.15 chr9 129328261 129328401 + lincRNA NOVEL OTTHUMG00000183021.1 141 141 1 ENSG00000233901.4 LINC01503 chr9 129332300 129359538 + lincRNA NOVEL OTTHUMG00000020778.5 27239 1594 14 ENSG00000242281.3 RN7SL159P chr9 129370170 129370461 - misc_RNA KNOWN NA 292 292 1 ENSG00000236146.2 RP11-65J3.6 chr9 129380136 129380470 - processed_pseudogene KNOWN OTTHUMG00000020782.3 335 335 1 ENSG00000230676.1 RP11-65J3.3 chr9 129430652 129451422 - lincRNA NOVEL OTTHUMG00000020780.3 20771 2054 4 ENSG00000226355.1 RP11-65J3.2 chr9 129438216 129439118 + lincRNA NOVEL OTTHUMG00000020779.2 903 800 2 ENSG00000264298.1 AL353803.1 chr9 129478556 129478652 + miRNA NOVEL NA 97 97 1 ENSG00000261334.1 RP11-65J3.14 chr9 129480605 129482538 - lincRNA NOVEL OTTHUMG00000175667.1 1934 1934 1 ENSG00000232912.4 RP5-1115A15.1 chr1 8424645 8434838 + antisense NOVEL OTTHUMG00000001772.1 10194 702 7 ENSG00000263513.4 FAM72C chr1 143944179 143971965 - protein_coding KNOWN OTTHUMG00000041029.3 27787 2566 10 ENSG00000204054.10 LINC00963 chr9 129483451 129513683 + processed_transcript NOVEL OTTHUMG00000020783.9 30233 13086 61 ENSG00000239353.1 RP11-492E3.51 chr9 129501990 129513686 + lincRNA NOVEL OTTHUMG00000046208.1 11697 382 2 ENSG00000227619.1 RP11-492E3.2 chr9 129575409 129584556 + antisense NOVEL OTTHUMG00000020784.1 9148 2449 4 ENSG00000148335.13 NTMT1 chr9 129608884 129636131 + protein_coding KNOWN OTTHUMG00000020785.3 27248 3029 41 ENSG00000179058.6 C9orf50 chr9 129612225 129620776 - protein_coding KNOWN OTTHUMG00000020786.1 8552 1620 12 ENSG00000148331.10 ASB6 chr9 129634604 129642169 - protein_coding KNOWN OTTHUMG00000020787.2 7566 4622 16 ENSG00000234789.1 RP11-483H20.4 chr9 129640476 129641282 + antisense NOVEL OTTHUMG00000020788.1 807 470 2 ENSG00000167157.10 PRRX2 chr9 129665641 129722674 + protein_coding KNOWN OTTHUMG00000020790.3 57034 1311 4 ENSG00000236024.1 PRRX2-AS1 chr9 129712896 129718635 - antisense NOVEL OTTHUMG00000020789.1 5740 429 2 ENSG00000148344.10 PTGES chr9 129738331 129753047 - protein_coding KNOWN OTTHUMG00000020791.4 14717 1896 7 ENSG00000270872.2 SRGAP2D chr1 143975087 144068350 + unprocessed_pseudogene KNOWN OTTHUMG00000188642.1 93264 1021 7 ENSG00000233909.1 UBE2V1P4 chr9 129791196 129791837 + processed_pseudogene KNOWN OTTHUMG00000020792.1 642 344 2 ENSG00000136816.14 TOR1B chr9 129803153 129811281 + protein_coding KNOWN OTTHUMG00000020795.1 8129 2911 14 ENSG00000136827.11 TOR1A chr9 129812944 129824134 - protein_coding KNOWN OTTHUMG00000020794.2 11191 3766 14 ENSG00000136819.13 C9orf78 chr9 129827290 129835863 - protein_coding KNOWN OTTHUMG00000020796.2 8574 5099 47 ENSG00000136878.11 USP20 chr9 129834698 129881838 + protein_coding KNOWN OTTHUMG00000020793.3 47141 5521 107 ENSG00000276124.1 MIR6855 chr9 129869605 129869671 + miRNA KNOWN NA 67 67 1 ENSG00000224988.1 RP11-409K20.7 chr9 129883693 129884170 - processed_pseudogene KNOWN OTTHUMG00000020798.1 478 341 2 ENSG00000187239.15 FNBP1 chr9 129887187 130043194 - protein_coding KNOWN OTTHUMG00000020800.2 156008 6600 94 ENSG00000230684.1 RP11-409K20.6 chr9 129933536 129936541 + antisense NOVEL OTTHUMG00000020797.1 3006 266 2 ENSG00000270755.1 RP11-138E2.1 chr9 130044713 130045081 + lincRNA NOVEL OTTHUMG00000184927.1 369 369 1 ENSG00000276674.1 IGKV1OR1-1 chr1 144085628 144086098 + IG_V_pseudogene KNOWN OTTHUMG00000184566.2 471 347 2 ENSG00000148358.18 GPR107 chr9 130053426 130140169 + protein_coding KNOWN OTTHUMG00000020804.5 86744 9139 103 ENSG00000223188.1 Y_RNA chr9 130120806 130120912 + misc_RNA NOVEL NA 107 107 1 ENSG00000196979.1 RP11-88G17.6 chr9 130140610 130144219 - lincRNA NOVEL OTTHUMG00000187231.1 3610 3258 2 ENSG00000107130.8 NCS1 chr9 130172578 130237304 + protein_coding KNOWN OTTHUMG00000020801.2 64727 5289 19 ENSG00000148357.15 HMCN2 chr9 130265882 130434123 + protein_coding KNOWN OTTHUMG00000140096.4 168242 20363 153 ENSG00000264169.2 RN7SL665P chr9 130400266 130400565 + misc_RNA KNOWN NA 300 300 1 ENSG00000130707.16 ASS1 chr9 130444929 130501274 + protein_coding KNOWN OTTHUMG00000020806.3 56346 3050 90 ENSG00000107164.15 FUBP3 chr9 130578965 130638352 + protein_coding KNOWN OTTHUMG00000020809.2 59388 5507 39 ENSG00000277713.1 MIR6856 chr9 130626297 130626363 + miRNA KNOWN NA 67 67 1 ENSG00000232172.1 RP11-57C19.2 chr9 130651799 130652383 + processed_pseudogene KNOWN OTTHUMG00000020810.1 585 585 1 ENSG00000275075.1 CH17-248H7.2 chr1 144168752 144168850 + processed_pseudogene KNOWN OTTHUMG00000188643.1 99 99 1 ENSG00000130711.3 PRDM12 chr9 130664594 130682981 + protein_coding KNOWN OTTHUMG00000020808.1 18388 2476 5 ENSG00000130713.14 EXOSC2 chr9 130693721 130704894 + protein_coding KNOWN OTTHUMG00000020811.3 11174 4240 73 ENSG00000097007.16 ABL1 chr9 130713946 130887675 + protein_coding KNOWN OTTHUMG00000020813.2 173730 6276 24 ENSG00000224797.1 RP11-57C19.6 chr9 130724786 130725050 - processed_pseudogene KNOWN OTTHUMG00000020812.1 265 265 1 ENSG00000188710.2 QRFP chr9 130892702 130896812 - protein_coding KNOWN OTTHUMG00000131663.2 4111 1658 4 ENSG00000130720.11 FIBCD1 chr9 130902438 130939286 - protein_coding KNOWN OTTHUMG00000020814.3 36849 3831 39 ENSG00000236658.1 RP11-83J21.3 chr9 130933851 130945520 + antisense NOVEL OTTHUMG00000020815.1 11670 462 3 ENSG00000050555.16 LAMC3 chr9 131009082 131094473 + protein_coding KNOWN OTTHUMG00000020819.4 85392 7594 47 ENSG00000252582.1 SNORA31 chr9 131021168 131021306 - snoRNA NOVEL NA 139 139 1 ENSG00000126878.11 AIF1L chr9 131096476 131123152 + protein_coding KNOWN OTTHUMG00000020817.3 26677 5299 53 ENSG00000275767.1 CH17-248H7.3 chr1 144179777 144211729 + unprocessed_pseudogene KNOWN OTTHUMG00000188644.1 31953 1861 7 ENSG00000126883.15 NUP214 chr9 131125561 131234670 + protein_coding KNOWN OTTHUMG00000020816.5 109110 13062 212 ENSG00000252622.1 RNU6-881P chr9 131126990 131127091 + snRNA KNOWN NA 102 102 1 ENSG00000236986.5 RP11-544A12.4 chr9 131132852 131167505 - antisense NOVEL OTTHUMG00000020818.3 34654 3028 47 ENSG00000246851.1 RP11-544A12.8 chr9 131189910 131194205 - antisense NOVEL OTTHUMG00000165429.1 4296 3084 2 ENSG00000226987.1 RP11-544A12.5 chr9 131240687 131241724 + processed_pseudogene KNOWN OTTHUMG00000020820.1 1038 559 2 ENSG00000126882.11 FAM78A chr9 131258076 131276547 - protein_coding KNOWN OTTHUMG00000020821.2 18472 5499 13 ENSG00000160539.4 PPAPDC3 chr9 131289694 131309262 + protein_coding KNOWN OTTHUMG00000020822.1 19569 2430 4 ENSG00000130723.16 PRRC2B chr9 131394093 131500197 + protein_coding KNOWN OTTHUMG00000020827.2 106105 12293 95 ENSG00000235284.1 SNORD62A chr9 131485665 131485750 + snoRNA KNOWN NA 86 86 1 ENSG00000231587.1 SNORD62B chr9 131490486 131490571 + snoRNA KNOWN NA 86 86 1 ENSG00000232527.6 RP11-14N7.2 chr1 144227030 144250288 - lincRNA NOVEL OTTHUMG00000017423.4 23259 839 10 ENSG00000176868.2 RP11-334J6.7 chr9 131497479 131500191 - antisense NOVEL OTTHUMG00000186801.1 2713 2713 4 ENSG00000130714.14 POMT1 chr9 131502902 131523806 + protein_coding KNOWN OTTHUMG00000020826.1 20905 6067 168 ENSG00000230289.1 RP11-334J6.6 chr9 131516558 131522229 - antisense NOVEL OTTHUMG00000020824.1 5672 473 2 ENSG00000130717.11 UCK1 chr9 131523801 131531268 - protein_coding KNOWN OTTHUMG00000020823.3 7468 2688 51 ENSG00000107263.17 RAPGEF1 chr9 131576770 131740074 - protein_coding KNOWN OTTHUMG00000020829.4 163305 7002 97 ENSG00000240853.3 RN7SL328P chr9 131725168 131725467 - misc_RNA KNOWN NA 300 300 1 ENSG00000231018.1 EIF4A1P3 chr9 131782570 131782813 - processed_pseudogene KNOWN OTTHUMG00000020830.1 244 244 1 ENSG00000212395.1 SNORA67 chr9 131782860 131782958 - snoRNA NOVEL NA 99 99 1 ENSG00000236687.1 RP11-323H21.3 chr9 131816192 131820988 + lincRNA NOVEL OTTHUMG00000020831.1 4797 829 3 ENSG00000160563.12 MED27 chr9 131860107 132079908 - protein_coding KNOWN OTTHUMG00000020833.4 219802 2107 21 ENSG00000276442.1 5S_rRNA chr1 144265217 144265326 + rRNA NOVEL NA 110 110 1 ENSG00000196358.9 NTNG2 chr9 132161676 132244534 + protein_coding KNOWN OTTHUMG00000020835.2 82859 7845 19 ENSG00000221105.1 AL159997.1 chr9 132214751 132214875 - miRNA NOVEL NA 125 125 1 ENSG00000107290.12 SETX chr9 132261356 132354985 - protein_coding KNOWN OTTHUMG00000020834.4 93630 12140 53 ENSG00000125482.11 TTF1 chr9 132375548 132406851 - protein_coding KNOWN OTTHUMG00000020836.2 31304 3215 23 ENSG00000188523.7 C9orf171 chr9 132410043 132573317 + protein_coding KNOWN OTTHUMG00000131684.2 163275 2147 17 ENSG00000252521.1 RNU5D-2P chr9 132421641 132421690 + snRNA KNOWN NA 50 50 1 ENSG00000125492.8 BARHL1 chr9 132582185 132590266 + protein_coding KNOWN OTTHUMG00000020839.2 8082 2341 7 ENSG00000125485.16 DDX31 chr9 132592997 132670401 - protein_coding KNOWN OTTHUMG00000020843.3 77405 5546 88 ENSG00000276629.1 AL160165.1 chr9 132623250 132623333 - miRNA NOVEL NA 84 84 1 ENSG00000125484.10 GTF3C4 chr9 132670035 132694955 + protein_coding KNOWN OTTHUMG00000020842.3 24921 9043 8 ENSG00000175658.4 DRD5P2 chr1 144274892 144277993 - processed_pseudogene KNOWN OTTHUMG00000013836.3 3102 2012 2 ENSG00000165695.8 AK8 chr9 132725578 132878777 - protein_coding KNOWN OTTHUMG00000021009.1 153200 2731 44 ENSG00000224992.1 RP11-295G24.5 chr9 132769453 132770212 - sense_intronic NOVEL OTTHUMG00000020846.1 760 531 2 ENSG00000165698.14 C9orf9 chr9 132878027 132890201 + protein_coding KNOWN OTTHUMG00000020847.1 12175 2823 13 ENSG00000165699.12 TSC1 chr9 132891348 132944633 - protein_coding KNOWN OTTHUMG00000020844.3 53286 9911 100 ENSG00000165702.11 GFI1B chr9 132945533 132991687 + protein_coding KNOWN OTTHUMG00000020848.3 46155 2872 26 ENSG00000263816.1 MIR548AW chr9 132945707 132945771 + miRNA KNOWN NA 65 65 1 ENSG00000233800.3 RP11-295G24.4 chr9 132947069 132951560 + sense_intronic NOVEL OTTHUMG00000020845.3 4492 645 4 ENSG00000234907.1 RP11-415H23.4 chr9 132962511 132962667 + processed_pseudogene KNOWN OTTHUMG00000020850.3 157 157 1 ENSG00000238558.1 RNU7-21P chr9 132963732 132963793 + snRNA KNOWN NA 62 62 1 ENSG00000196205.8 EEF1A1P5 chr9 133019486 133020874 + processed_pseudogene KNOWN OTTHUMG00000020851.3 1389 1389 1 ENSG00000276756.3 CH17-125A10.1 chr1 144276484 144305180 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000188646.1 28697 1476 19 ENSG00000148308.16 GTF3C5 chr9 133030675 133058503 + protein_coding KNOWN OTTHUMG00000020856.6 27829 3592 66 ENSG00000273932.1 MIR6877 chr9 133051996 133052059 + miRNA KNOWN NA 64 64 1 ENSG00000170835.13 CEL chr9 133061978 133087355 + protein_coding KNOWN OTTHUMG00000020855.1 25378 2681 17 ENSG00000170827.8 CELP chr9 133079900 133087355 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000020857.7 7456 3593 13 ENSG00000160271.13 RALGDS chr9 133097720 133149334 - protein_coding KNOWN OTTHUMG00000020858.1 51615 7624 162 ENSG00000148288.10 GBGT1 chr9 133152948 133163945 - protein_coding KNOWN OTTHUMG00000020853.1 10998 3713 46 ENSG00000171102.13 OBP2B chr9 133205277 133209250 - protein_coding KNOWN OTTHUMG00000020860.4 3974 1135 36 ENSG00000119440.8 LCN1P1 chr9 133224905 133228591 - unprocessed_pseudogene KNOWN OTTHUMG00000020859.2 3687 505 6 ENSG00000175164.12 ABO chr9 133250401 133275214 - protein_coding KNOWN OTTHUMG00000020872.5 24814 6354 24 ENSG00000201843.1 Y_RNA chr9 133302470 133302563 + misc_RNA NOVEL NA 94 94 1 ENSG00000271567.1 PPIAL4E chr1 144372875 144373659 - protein_coding KNOWN OTTHUMG00000189244.1 785 785 1 ENSG00000204031.3 LCN1P2 chr9 133317794 133318469 + unprocessed_pseudogene KNOWN OTTHUMG00000020863.2 676 223 2 ENSG00000148296.6 SURF6 chr9 133328774 133336398 - protein_coding KNOWN OTTHUMG00000020871.3 7625 4626 7 ENSG00000201451.1 Y_RNA chr9 133337728 133337824 - misc_RNA NOVEL NA 97 97 1 ENSG00000148297.14 MED22 chr9 133338323 133348131 - protein_coding KNOWN OTTHUMG00000020869.10 9809 7224 39 ENSG00000230064.1 RP11-244N20.7 chr9 133338990 133339465 + processed_pseudogene KNOWN OTTHUMG00000020861.2 476 476 1 ENSG00000148303.15 RPL7A chr9 133348214 133351426 + protein_coding KNOWN OTTHUMG00000020864.1 3213 2242 53 ENSG00000206611.1 SNORD24 chr9 133349396 133349470 + snoRNA KNOWN NA 75 75 1 ENSG00000200831.1 SNORD36B chr9 133350095 133350168 + snoRNA KNOWN NA 74 74 1 ENSG00000199744.1 SNORD36A chr9 133350456 133350528 + snoRNA KNOWN NA 73 73 1 ENSG00000252542.1 SNORD36C chr9 133350847 133350912 + snoRNA KNOWN NA 66 66 1 ENSG00000221083.1 SNORA77 chr1 8511795 8511919 - snoRNA NOVEL NA 125 125 1 ENSG00000271439.1 RP11-666A1.7 chr1 144401069 144401355 - processed_pseudogene KNOWN OTTHUMG00000184372.1 287 287 1 ENSG00000148290.8 SURF1 chr9 133351755 133356676 - protein_coding KNOWN OTTHUMG00000020866.5 4922 1761 32 ENSG00000281114.1 AL593848.2 chr9 133353713 133353831 - miRNA NOVEL NA 119 119 1 ENSG00000148291.8 SURF2 chr9 133356552 133361169 + protein_coding KNOWN OTTHUMG00000020867.2 4618 1008 13 ENSG00000148248.12 SURF4 chr9 133361449 133376166 - protein_coding KNOWN OTTHUMG00000020868.2 14718 3446 48 ENSG00000198870.7 STKLD1 chr9 133376367 133406096 + protein_coding KNOWN OTTHUMG00000020862.2 29730 4408 27 ENSG00000148300.10 REXO4 chr9 133406059 133418096 - protein_coding KNOWN OTTHUMG00000020870.6 12038 2654 32 ENSG00000160323.17 ADAMTS13 chr9 133414358 133459402 + protein_coding KNOWN OTTHUMG00000020876.4 45045 5708 181 ENSG00000160325.13 CACFD1 chr9 133459965 133470848 + protein_coding KNOWN OTTHUMG00000020875.2 10884 3520 33 ENSG00000160326.12 SLC2A6 chr9 133471095 133479137 - protein_coding KNOWN OTTHUMG00000020874.2 8043 3540 36 ENSG00000187616.4 TMEM8C chr9 133514586 133528612 - protein_coding KNOWN OTTHUMG00000131685.3 14027 1008 9 ENSG00000207205.1 RNVU1-15 chr1 144412576 144412740 + snRNA KNOWN NA 165 165 1 ENSG00000197859.8 ADAMTSL2 chr9 133532164 133575519 + protein_coding KNOWN OTTHUMG00000131706.2 43356 4677 57 ENSG00000196990.7 FAM163B chr9 133578415 133586197 - protein_coding KNOWN OTTHUMG00000159557.1 7783 1353 5 ENSG00000261018.1 LL09NC01-254D11.1 chr9 133611798 133633099 - antisense NOVEL OTTHUMG00000175612.1 21302 1990 2 ENSG00000123454.9 DBH chr9 133636360 133659344 + protein_coding KNOWN OTTHUMG00000020878.2 22985 2764 15 ENSG00000225756.1 DBH-AS1 chr9 133654586 133657313 - antisense NOVEL OTTHUMG00000020877.1 2728 2139 2 ENSG00000123453.15 SARDH chr9 133663560 133739955 - protein_coding KNOWN OTTHUMG00000020879.3 76396 5120 116 ENSG00000160293.15 VAV2 chr9 133761894 133992604 - protein_coding KNOWN OTTHUMG00000020882.1 230711 5682 92 ENSG00000235106.7 LINC00094 chr9 134025439 134034666 + antisense KNOWN OTTHUMG00000020880.5 9228 5994 17 ENSG00000169925.15 BRD3 chr9 134030305 134068535 - protein_coding KNOWN OTTHUMG00000021004.5 38231 6876 33 ENSG00000235138.1 RP11-374P20.4 chr9 134054290 134058805 + antisense NOVEL OTTHUMG00000020881.1 4516 2112 3 ENSG00000237343.1 RP11-763B22.4 chr1 144418113 144419192 - lincRNA NOVEL OTTHUMG00000040699.1 1080 314 2 ENSG00000271525.1 ARF4P1 chr9 134078904 134079444 + processed_pseudogene KNOWN OTTHUMG00000184710.1 541 541 1 ENSG00000273249.1 LL09NC01-251B2.3 chr9 134132242 134135772 - antisense NOVEL OTTHUMG00000186051.1 3531 974 4 ENSG00000196363.8 WDR5 chr9 134135365 134159968 + protein_coding KNOWN OTTHUMG00000131707.2 24604 3629 23 ENSG00000221676.1 RNU6ATAC chr9 134164439 134164564 - snRNA KNOWN NA 126 126 1 ENSG00000273473.1 LL09NC01-139C3.1 chr9 134168769 134169340 + lincRNA NOVEL OTTHUMG00000186052.1 572 572 1 ENSG00000223729.1 RP11-145E17.2 chr9 134293931 134295397 - lincRNA NOVEL OTTHUMG00000020883.2 1467 743 2 ENSG00000279929.1 RP11-145E17.3 chr9 134298463 134300413 + TEC KNOWN OTTHUMG00000175780.1 1951 1951 1 ENSG00000186350.9 RXRA chr9 134317098 134440585 + protein_coding KNOWN OTTHUMG00000020887.2 123488 10814 25 ENSG00000263897.1 MIR4669 chr9 134379411 134379472 + miRNA KNOWN NA 62 62 1 ENSG00000223795.2 RP11-473E2.2 chr9 134505472 134521442 + lincRNA NOVEL OTTHUMG00000020884.2 15971 450 3 ENSG00000233586.1 RP11-763B22.3 chr1 144418678 144419190 + processed_pseudogene KNOWN OTTHUMG00000040698.2 513 513 1 ENSG00000228877.2 RP11-473E2.4 chr9 134527182 134545244 + lincRNA NOVEL OTTHUMG00000020886.2 18063 428 2 ENSG00000227150.1 RP11-473E2.3 chr9 134552738 134553897 + lincRNA NOVEL OTTHUMG00000020885.1 1160 280 2 ENSG00000130635.14 COL5A1 chr9 134641774 134844843 + protein_coding KNOWN OTTHUMG00000020891.4 203070 11189 155 ENSG00000204011.4 COL5A1-AS1 chr9 134649385 134652843 - antisense KNOWN OTTHUMG00000020890.2 3459 336 2 ENSG00000264877.1 AL603650.2 chr9 134848973 134849120 - miRNA NOVEL NA 148 148 1 ENSG00000265286.1 AL603650.3 chr9 134849175 134849252 - miRNA NOVEL NA 78 78 1 ENSG00000264744.1 MIR3689C chr9 134849298 134849369 - miRNA KNOWN NA 72 72 1 ENSG00000265872.1 MIR3689A chr9 134849487 134849564 - miRNA KNOWN NA 78 78 1 ENSG00000265848.1 MIR3689D1 chr9 134849609 134849682 - miRNA KNOWN NA 74 74 1 ENSG00000266060.1 AL603650.4 chr9 134849813 134849960 - miRNA NOVEL NA 148 148 1 ENSG00000266338.5 NBPF15 chr1 144421386 144461674 - protein_coding KNOWN OTTHUMG00000013634.13 40289 5306 98 ENSG00000263507.1 AL603650.1 chr9 134849991 134850068 - miRNA NOVEL NA 78 78 1 ENSG00000264163.1 MIR3689B chr9 134850125 134850272 - miRNA KNOWN NA 148 148 1 ENSG00000264136.1 MIR3689D2 chr9 134850277 134850356 - miRNA KNOWN NA 80 80 1 ENSG00000266827.1 MIR3689E chr9 134850570 134850641 - miRNA KNOWN NA 72 72 1 ENSG00000281636.1 AL603650.5 chr9 134850615 134850692 - miRNA NOVEL NA 78 78 1 ENSG00000266514.1 MIR3689F chr9 134850742 134850807 - miRNA KNOWN NA 66 66 1 ENSG00000232355.2 RP11-263F14.3 chr9 134868236 134868475 + unprocessed_pseudogene KNOWN OTTHUMG00000020893.2 240 240 1 ENSG00000160339.14 FCN2 chr9 134880812 134887520 + protein_coding KNOWN OTTHUMG00000020892.1 6709 1057 15 ENSG00000085265.9 FCN1 chr9 134905890 134917963 - protein_coding KNOWN OTTHUMG00000020895.1 12074 4981 17 ENSG00000236403.1 RP11-447M12.2 chr9 134937151 134943195 + lincRNA NOVEL OTTHUMG00000020894.1 6045 462 3 ENSG00000227212.3 PFN1P7 chr1 144442606 144443004 + processed_pseudogene KNOWN OTTHUMG00000013834.1 399 399 1 ENSG00000279935.1 RP11-447M12.3 chr9 134992958 134995854 + TEC KNOWN OTTHUMG00000175584.1 2897 2897 1 ENSG00000130558.17 OLFM1 chr9 135075243 135121179 + protein_coding KNOWN OTTHUMG00000020897.3 45937 6302 51 ENSG00000227958.1 RP11-399H11.3 chr9 135204722 135237597 - lincRNA NOVEL OTTHUMG00000020899.1 32876 527 2 ENSG00000233936.1 RP11-399H11.2 chr9 135245696 135252708 - lincRNA NOVEL OTTHUMG00000020898.1 7013 886 2 ENSG00000178243.4 C9orf62 chr9 135343249 135346562 + lincRNA KNOWN OTTHUMG00000020900.2 3314 1924 3 ENSG00000235572.1 RP11-555H7.2 chr9 135352684 135354220 + lincRNA NOVEL OTTHUMG00000020901.1 1537 390 3 ENSG00000224682.1 SOCS5P2 chr9 135447446 135450154 + processed_pseudogene KNOWN OTTHUMG00000020907.1 2709 1359 5 ENSG00000225361.3 PPP1R26-AS1 chr9 135462727 135480777 - antisense NOVEL OTTHUMG00000020905.3 18051 3750 8 ENSG00000196422.9 PPP1R26 chr9 135479079 135488893 + protein_coding KNOWN OTTHUMG00000020904.2 9815 5276 18 ENSG00000160345.11 C9orf116 chr9 135495181 135501734 - protein_coding KNOWN OTTHUMG00000020902.2 6554 1864 15 ENSG00000229002.1 RP11-666A1.4 chr1 144472535 144474790 - unprocessed_pseudogene KNOWN OTTHUMG00000017425.1 2256 264 2 ENSG00000122140.9 MRPS2 chr9 135499984 135504673 + protein_coding KNOWN OTTHUMG00000020910.1 4690 2464 32 ENSG00000226706.1 RP11-426A6.5 chr9 135503273 135506447 - antisense NOVEL OTTHUMG00000020903.1 3175 1117 3 ENSG00000160349.8 LCN1 chr9 135521438 135526532 + protein_coding KNOWN OTTHUMG00000020908.1 5095 781 14 ENSG00000221613.1 AL161452.1 chr9 135528611 135528700 - miRNA NOVEL NA 90 90 1 ENSG00000122136.12 OBP2A chr9 135546139 135549969 + protein_coding KNOWN OTTHUMG00000020909.4 3831 1022 47 ENSG00000122133.15 PAEP chr9 135561756 135566955 + protein_coding KNOWN OTTHUMG00000020914.4 5200 1454 55 ENSG00000237339.4 LINC01502 chr9 135574935 135587112 + lincRNA NOVEL OTTHUMG00000020912.1 12178 2746 13 ENSG00000224045.1 RP11-98L5.4 chr9 135588002 135591975 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000020913.2 3974 526 7 ENSG00000236543.1 RP11-98L5.5 chr9 135614296 135615508 + antisense NOVEL OTTHUMG00000153545.1 1213 202 2 ENSG00000204007.5 GLT6D1 chr9 135623656 135639540 - protein_coding KNOWN OTTHUMG00000020911.2 15885 1526 11 ENSG00000275291.1 U1 chr1 144523860 144524021 - snRNA NOVEL NA 162 162 1 ENSG00000148386.8 LCN9 chr9 135663322 135666422 + protein_coding KNOWN OTTHUMG00000020916.2 3101 1105 22 ENSG00000165643.9 SOHLH1 chr9 135693407 135699528 - protein_coding KNOWN OTTHUMG00000020915.2 6122 1987 15 ENSG00000107147.10 KCNT1 chr9 135702185 135795508 + protein_coding KNOWN OTTHUMG00000020917.9 93324 11656 390 ENSG00000130559.17 CAMSAP1 chr9 135808487 135907228 - protein_coding KNOWN OTTHUMG00000020918.4 98742 8642 82 ENSG00000238058.1 RP11-432J22.2 chr9 135907812 135913513 + antisense NOVEL OTTHUMG00000020919.1 5702 311 3 ENSG00000130560.7 UBAC1 chr9 135932969 135961380 - protein_coding KNOWN OTTHUMG00000020920.1 28412 2979 31 ENSG00000148411.6 NACC2 chr9 136006537 136095285 - protein_coding KNOWN OTTHUMG00000020921.1 88749 7212 13 ENSG00000260193.1 RP11-83N9.5 chr9 136107808 136109424 - lincRNA NOVEL OTTHUMG00000175806.1 1617 1334 3 ENSG00000238227.6 C9orf69 chr9 136114581 136118863 - protein_coding KNOWN OTTHUMG00000020922.3 4283 3396 11 ENSG00000275329.1 RP11-83N9.6 chr9 136122521 136124363 + lincRNA NOVEL OTTHUMG00000187245.1 1843 1843 1 ENSG00000278099.1 U1 chr1 144551779 144551943 - snRNA NOVEL NA 165 165 1 ENSG00000107187.14 LHX3 chr9 136196250 136205109 - protein_coding KNOWN OTTHUMG00000020924.3 8860 3089 18 ENSG00000165661.14 QSOX2 chr9 136206333 136245841 - protein_coding KNOWN OTTHUMG00000020923.2 39509 4530 33 ENSG00000264527.2 WI2-1959D15.1 chr9 136249971 136251205 - lincRNA NOVEL OTTHUMG00000179645.2 1235 1235 1 ENSG00000279813.1 CR392000.1 chr9 136249978 136251205 + protein_coding KNOWN NA 1228 1228 1 ENSG00000260220.4 MGC50722 chr9 136280942 136306901 - protein_coding NOVEL OTTHUMG00000188591.2 25960 4811 35 ENSG00000262075.3 DKFZP434A062 chr9 136322303 136327323 - lincRNA NOVEL OTTHUMG00000188592.1 5021 5021 2 ENSG00000160360.10 GPSM1 chr9 136327476 136359605 + protein_coding KNOWN OTTHUMG00000020930.6 32130 4950 47 ENSG00000213221.4 DNLZ chr9 136359480 136363789 - protein_coding KNOWN OTTHUMG00000020931.2 4310 3144 5 ENSG00000187796.12 CARD9 chr9 136361903 136373681 - protein_coding KNOWN OTTHUMG00000020925.4 11779 6699 66 ENSG00000165684.3 SNAPC4 chr9 136375577 136398797 - protein_coding KNOWN OTTHUMG00000020929.1 23221 5010 23 ENSG00000273689.1 AC253578.1 chr1 144560451 144560527 + miRNA NOVEL NA 77 77 1 ENSG00000165689.15 SDCCAG3 chr9 136401922 136410609 - protein_coding KNOWN OTTHUMG00000020928.12 8688 3133 55 ENSG00000165688.10 PMPCA chr9 136410570 136423761 + protein_coding KNOWN OTTHUMG00000020926.4 13192 6590 73 ENSG00000148384.11 INPP5E chr9 136428619 136439822 - protein_coding KNOWN OTTHUMG00000020927.1 11204 3394 10 ENSG00000148396.17 SEC16A chr9 136440096 136483759 - protein_coding KNOWN OTTHUMG00000020932.6 43664 9975 179 ENSG00000196366.3 C9orf163 chr9 136483495 136486067 + lincRNA KNOWN OTTHUMG00000131725.1 2573 2573 2 ENSG00000148400.9 NOTCH1 chr9 136494444 136545862 - protein_coding KNOWN OTTHUMG00000020935.1 51419 9880 39 ENSG00000263403.1 MIR4673 chr9 136519568 136519626 - miRNA KNOWN NA 59 59 1 ENSG00000227512.1 RP11-413M3.4 chr9 136542881 136543835 + antisense NOVEL OTTHUMG00000020934.1 955 864 2 ENSG00000265181.1 MIR4674 chr9 136546173 136546259 - miRNA KNOWN NA 87 87 1 ENSG00000237886.1 LINC01573 chr9 136546212 136549893 + antisense NOVEL OTTHUMG00000020933.1 3682 1088 5 ENSG00000269732.1 WBP1LP7 chr1 439870 440232 + processed_pseudogene KNOWN OTTHUMG00000002859.2 363 363 1 ENSG00000270282.1 RP5-1115A15.2 chr1 8512653 8513021 + processed_pseudogene KNOWN OTTHUMG00000184266.1 369 369 1 ENSG00000277918.1 U1 chr1 144560666 144560829 - snRNA NOVEL NA 164 164 1 ENSG00000279141.2 LINC01451 chr9 136612024 136617181 - lincRNA KNOWN OTTHUMG00000189535.1 5158 3406 9 ENSG00000228401.4 RP11-251M1.1 chr9 136648610 136660421 - antisense NOVEL OTTHUMG00000020937.1 11812 557 2 ENSG00000172889.14 EGFL7 chr9 136658856 136672678 + protein_coding KNOWN OTTHUMG00000020938.4 13823 2553 56 ENSG00000199161.1 MIR126 chr9 136670602 136670686 + miRNA KNOWN NA 85 85 1 ENSG00000169692.11 AGPAT2 chr9 136673143 136687423 - protein_coding KNOWN OTTHUMG00000020936.2 14281 1798 24 ENSG00000221693.1 AL590226.1 chr9 136694136 136694262 + miRNA NOVEL NA 127 127 1 ENSG00000165716.8 FAM69B chr9 136712570 136724050 + protein_coding KNOWN OTTHUMG00000020940.1 11481 2704 12 ENSG00000233016.5 SNHG7 chr9 136721366 136728184 - antisense KNOWN OTTHUMG00000020949.1 6819 4345 16 ENSG00000280496.1 SNORA43 chr9 136726104 136726239 - snoRNA KNOWN NA 136 136 1 ENSG00000276161.1 SNORA17 chr9 136726105 136726234 - snoRNA NOVEL NA 130 130 1 ENSG00000279782.1 PPIAL4F chr1 144592868 144593527 + protein_coding KNOWN OTTHUMG00000189245.1 660 660 1 ENSG00000274998.1 SNORA17 chr9 136726747 136726879 - snoRNA KNOWN NA 133 133 1 ENSG00000281808.1 SNORA17 chr9 136726748 136726879 - snoRNA NOVEL NA 132 132 1 ENSG00000274356.1 RP11-216L13.21 chr9 136728953 136729855 - unprocessed_pseudogene KNOWN OTTHUMG00000187869.1 903 411 3 ENSG00000204003.7 RP11-216L13.16 chr9 136738167 136748453 - protein_coding NOVEL OTTHUMG00000180116.1 10287 2651 16 ENSG00000187922.12 LCN10 chr9 136738167 136743356 - protein_coding KNOWN OTTHUMG00000150428.2 5190 4263 37 ENSG00000267206.4 LCN6 chr9 136744011 136748528 - protein_coding KNOWN OTTHUMG00000020941.4 4518 1681 28 ENSG00000278756.1 MIR6722 chr9 136746893 136746970 - miRNA KNOWN NA 78 78 1 ENSG00000204001.8 LCN8 chr9 136754386 136758543 - protein_coding KNOWN OTTHUMG00000020942.1 4158 3038 28 ENSG00000177984.6 LCN15 chr9 136759634 136766255 - protein_coding KNOWN OTTHUMG00000020943.2 6622 2887 17 ENSG00000224662.2 ATP6V1G1P3 chr9 136779939 136780218 + processed_pseudogene KNOWN OTTHUMG00000020944.2 280 280 1 ENSG00000277199.1 CH17-125A10.2 chr1 144627192 144642372 - lincRNA NOVEL OTTHUMG00000189067.1 15181 939 8 ENSG00000244187.6 TMEM141 chr9 136791355 136793257 + protein_coding KNOWN OTTHUMG00000020945.8 1903 1443 25 ENSG00000272896.1 RP11-216L13.17 chr9 136791379 136800595 + protein_coding NOVEL OTTHUMG00000186332.2 9217 735 6 ENSG00000213213.12 CCDC183 chr9 136796350 136807741 + protein_coding KNOWN OTTHUMG00000159445.2 11392 2964 67 ENSG00000273066.4 RP11-216L13.19 chr9 136799223 136810042 + processed_transcript NOVEL OTTHUMG00000186354.1 10820 4335 15 ENSG00000272679.1 RP11-216L13.18 chr9 136800366 136829466 + processed_transcript NOVEL OTTHUMG00000186334.1 29101 561 6 ENSG00000228544.1 CCDC183-AS1 chr9 136803927 136808848 - antisense NOVEL OTTHUMG00000020946.1 4922 2386 5 ENSG00000196642.14 RABL6 chr9 136807922 136957733 + protein_coding KNOWN OTTHUMG00000020947.8 149812 10350 122 ENSG00000213212.3 NCLP1 chr9 136812788 136815536 - processed_pseudogene KNOWN OTTHUMG00000020939.2 2749 1963 4 ENSG00000265806.1 MIR4292 chr9 136830957 136831023 + miRNA KNOWN NA 67 67 1 ENSG00000232434.2 C9orf172 chr9 136844415 136848801 + protein_coding KNOWN OTTHUMG00000187258.2 4387 4387 1 ENSG00000224363.2 RP11-289H16.1 chr1 144641371 144919902 + lincRNA NOVEL OTTHUMG00000041441.2 278532 2502 4 ENSG00000054148.16 PHPT1 chr9 136848724 136851027 + protein_coding KNOWN OTTHUMG00000020950.2 2304 1612 21 ENSG00000177943.12 MAMDC4 chr9 136850943 136860799 + protein_coding KNOWN OTTHUMG00000020951.7 9857 5469 92 ENSG00000107223.11 EDF1 chr9 136862119 136866286 - protein_coding KNOWN OTTHUMG00000020948.1 4168 1200 14 ENSG00000127191.16 TRAF2 chr9 136881912 136926607 + protein_coding KNOWN OTTHUMG00000020952.2 44696 3663 43 ENSG00000266507.1 MIR4479 chr9 136886733 136886803 + miRNA KNOWN NA 71 71 1 ENSG00000213590.2 RP11-229P13.2 chr9 136935840 136937161 + processed_pseudogene KNOWN OTTHUMG00000020966.1 1322 1322 1 ENSG00000260190.1 RP11-229P13.25 chr9 136937169 136937988 - sense_overlapping NOVEL OTTHUMG00000175609.1 820 820 1 ENSG00000159069.12 FBXW5 chr9 136940435 136944696 - protein_coding KNOWN OTTHUMG00000020967.3 4262 3252 49 ENSG00000176919.10 C8G chr9 136945246 136946974 + protein_coding KNOWN OTTHUMG00000020955.1 1729 1024 18 ENSG00000184925.10 LCN12 chr9 136949551 136955497 + protein_coding KNOWN OTTHUMG00000020968.4 5947 2819 63 ENSG00000278273.1 RP11-763B22.11 chr1 144661200 144679513 + unprocessed_pseudogene KNOWN OTTHUMG00000017498.4 18314 1178 9 ENSG00000198454.2 PRR31 chr9 136969243 136971990 + lincRNA KNOWN OTTHUMG00000020969.1 2748 978 4 ENSG00000238268.2 RP11-229P13.19 chr9 136975094 136976981 + lincRNA NOVEL OTTHUMG00000020963.2 1888 686 3 ENSG00000107317.10 PTGDS chr9 136977505 136985435 + protein_coding KNOWN OTTHUMG00000020957.4 7931 2378 44 ENSG00000214402.6 LCNL1 chr9 136981904 136986410 + protein_coding KNOWN OTTHUMG00000159546.1 4507 4052 11 ENSG00000148362.9 C9orf142 chr9 136992418 136993984 + protein_coding KNOWN OTTHUMG00000020971.2 1567 1367 37 ENSG00000169583.12 CLIC3 chr9 136994635 136996803 - protein_coding KNOWN OTTHUMG00000020954.3 2169 1177 15 ENSG00000107331.15 ABCA2 chr9 137007227 137028922 - protein_coding KNOWN OTTHUMG00000020958.5 21696 11514 432 ENSG00000180539.7 C9orf139 chr9 137027464 137037957 + processed_transcript KNOWN OTTHUMG00000020959.3 10494 4990 5 ENSG00000180549.7 FUT7 chr9 137030174 137033010 - protein_coding KNOWN OTTHUMG00000020964.1 2837 2584 2 ENSG00000279073.2 RP11-229P13.27 chr9 137031241 137040436 - protein_coding NOVEL OTTHUMG00000189401.1 9196 890 9 ENSG00000222854.1 RNA5SP59 chr1 144701050 144701159 - rRNA KNOWN NA 110 110 1 ENSG00000107281.8 NPDC1 chr9 137039470 137046203 - protein_coding KNOWN OTTHUMG00000020956.3 6734 2737 27 ENSG00000054179.10 ENTPD2 chr9 137048098 137054045 - protein_coding KNOWN OTTHUMG00000020953.4 5948 2633 25 ENSG00000236394.2 RP11-229P13.15 chr9 137052662 137053375 + antisense NOVEL OTTHUMG00000020960.2 714 580 2 ENSG00000229257.2 RP11-229P13.22 chr9 137057663 137062461 + antisense NOVEL OTTHUMG00000020974.2 4799 301 2 ENSG00000186193.8 SAPCD2 chr9 137062124 137070588 - protein_coding KNOWN OTTHUMG00000020961.3 8465 3848 6 ENSG00000231864.2 RP11-229P13.23 chr9 137063535 137064581 + antisense NOVEL OTTHUMG00000020975.2 1047 748 2 ENSG00000197355.9 UAP1L1 chr9 137077501 137084539 + protein_coding KNOWN OTTHUMG00000020962.4 7039 5283 23 ENSG00000268996.3 MAN1B1-AS1 chr9 137084946 137086817 - antisense KNOWN OTTHUMG00000187259.3 1872 1872 1 ENSG00000177239.13 MAN1B1 chr9 137086927 137109187 + protein_coding KNOWN OTTHUMG00000020978.5 22261 8331 101 ENSG00000199411.1 SNORD62 chr9 137094345 137094430 + snoRNA NOVEL NA 86 86 1 ENSG00000273825.1 CH17-164J11.1 chr1 144754572 144786606 - unprocessed_pseudogene KNOWN OTTHUMG00000188647.1 32035 1892 5 ENSG00000176978.12 DPP7 chr9 137110542 137115177 - protein_coding KNOWN OTTHUMG00000020977.2 4636 2820 81 ENSG00000176884.13 GRIN1 chr9 137138390 137168762 + protein_coding KNOWN OTTHUMG00000020976.6 30373 6729 188 ENSG00000184709.7 LRRC26 chr9 137168758 137170051 - protein_coding KNOWN OTTHUMG00000020980.1 1294 1209 2 ENSG00000261793.1 RP11-350O14.18 chr9 137168854 137171984 - protein_coding PUTATIVE OTTHUMG00000176413.2 3131 460 3 ENSG00000263697.1 MIR3621 chr9 137169186 137169270 - miRNA KNOWN NA 85 85 1 ENSG00000185863.7 TMEM210 chr9 137170858 137172409 - protein_coding KNOWN OTTHUMG00000020981.3 1552 1139 13 ENSG00000176248.8 ANAPC2 chr9 137174784 137188549 - protein_coding KNOWN OTTHUMG00000020983.2 13766 5447 33 ENSG00000176101.10 SSNA1 chr9 137188647 137190370 + protein_coding KNOWN OTTHUMG00000020982.2 1724 1183 10 ENSG00000176058.10 TPRN chr9 137191617 137204193 - protein_coding KNOWN OTTHUMG00000020984.3 12577 5338 12 ENSG00000187713.6 TMEM203 chr9 137204082 137205638 - protein_coding KNOWN OTTHUMG00000020985.2 1557 1557 1 ENSG00000196369.9 SRGAP2B chr1 144887265 145095528 - protein_coding KNOWN OTTHUMG00000041442.7 208264 7230 28 ENSG00000188566.10 NDOR1 chr9 137205670 137217009 + protein_coding KNOWN OTTHUMG00000020986.4 11340 2851 66 ENSG00000212864.3 RNF208 chr9 137220247 137221581 - protein_coding KNOWN OTTHUMG00000131782.2 1335 1150 3 ENSG00000197191.4 CYSRT1 chr9 137224635 137226311 + protein_coding KNOWN OTTHUMG00000153383.1 1677 1297 2 ENSG00000233198.3 RNF224 chr9 137227271 137229638 + protein_coding KNOWN OTTHUMG00000187399.1 2368 1798 3 ENSG00000198569.8 SLC34A3 chr9 137230757 137236554 + protein_coding KNOWN OTTHUMG00000131780.1 5798 2303 26 ENSG00000188229.5 TUBB4B chr9 137241213 137243707 + protein_coding KNOWN OTTHUMG00000131783.2 2495 2111 7 ENSG00000188163.7 FAM166A chr9 137243584 137247770 - protein_coding KNOWN OTTHUMG00000159545.2 4187 1801 16 ENSG00000275549.1 C9orf173-AS1 chr9 137250219 137253497 - antisense NOVEL OTTHUMG00000187409.1 3279 1701 4 ENSG00000197768.9 C9orf173 chr9 137251261 137253483 + protein_coding KNOWN OTTHUMG00000187404.3 2223 1611 37 ENSG00000188986.4 NELFB chr9 137255173 137273546 + protein_coding KNOWN OTTHUMG00000131778.1 18374 2698 13 ENSG00000271644.1 RP3-365I19.2 chr1 144965025 144965135 + processed_pseudogene KNOWN OTTHUMG00000184354.1 111 111 1 ENSG00000198113.2 TOR4A chr9 137277749 137282641 + protein_coding KNOWN OTTHUMG00000131779.1 4893 4148 2 ENSG00000270259.2 RP13-122B23.9 chr9 137286112 137287236 + processed_pseudogene KNOWN OTTHUMG00000184711.2 1125 515 2 ENSG00000260996.1 RP13-122B23.8 chr9 137293868 137295721 - sense_overlapping NOVEL OTTHUMG00000175633.1 1854 1854 1 ENSG00000198435.3 NRARP chr9 137300482 137302251 - protein_coding KNOWN OTTHUMG00000156150.1 1770 1770 1 ENSG00000187609.14 EXD3 chr9 137306896 137423262 - protein_coding KNOWN OTTHUMG00000156149.3 116367 7626 116 ENSG00000188747.7 NOXA1 chr9 137423350 137434406 + protein_coding KNOWN OTTHUMG00000131781.1 11057 1678 26 ENSG00000188833.8 ENTPD8 chr9 137434364 137441816 - protein_coding KNOWN OTTHUMG00000131831.3 7453 2836 41 ENSG00000165802.18 NSMF chr9 137447570 137459334 - protein_coding KNOWN OTTHUMG00000020989.2 11765 4915 131 ENSG00000276682.1 MIR7114 chr9 137450026 137450086 - miRNA KNOWN NA 61 61 1 ENSG00000130653.14 PNPLA7 chr9 137459953 137550534 - protein_coding KNOWN OTTHUMG00000020990.10 90582 9976 106 ENSG00000215784.5 FAM72D chr1 145096000 145112696 + protein_coding KNOWN OTTHUMG00000074801.4 16697 2397 4 ENSG00000263933.1 AL365502.1 chr9 137545748 137545833 + miRNA NOVEL NA 86 86 1 ENSG00000182154.7 MRPL41 chr9 137551199 137552555 + protein_coding KNOWN OTTHUMG00000020987.1 1357 1262 2 ENSG00000148399.10 DPH7 chr9 137554904 137578935 - protein_coding KNOWN OTTHUMG00000020991.1 24032 4475 77 ENSG00000165724.5 ZMYND19 chr9 137582079 137590490 - protein_coding KNOWN OTTHUMG00000020992.1 8412 2372 8 ENSG00000197070.12 ARRDC1 chr9 137605654 137615360 + protein_coding KNOWN OTTHUMG00000020993.3 9707 3821 62 ENSG00000203993.4 ARRDC1-AS1 chr9 137615332 137618906 - antisense KNOWN OTTHUMG00000020988.2 3575 2387 7 ENSG00000181090.16 EHMT1 chr9 137618963 137870016 + protein_coding KNOWN OTTHUMG00000020995.8 251054 16291 165 ENSG00000274841.1 Metazoa_SRP chr9 137638128 137638408 - misc_RNA NOVEL NA 281 281 1 ENSG00000233998.1 SETP5 chr9 137640986 137641547 - processed_pseudogene KNOWN OTTHUMG00000020994.2 562 562 1 ENSG00000281796.1 EHMT1-IT1 chr9 137763022 137764770 + sense_intronic KNOWN OTTHUMG00000189739.1 1749 1749 1 ENSG00000280851.1 AL096855.1 chr1 8512985 8513065 - miRNA NOVEL NA 81 81 1 ENSG00000263497.2 AC241585.1 chr1 145132157 145132253 + miRNA NOVEL NA 97 97 1 ENSG00000255585.3 RP11-188C12.2 chr9 137776539 137789235 - transcribed_processed_pseudogene KNOWN OTTHUMG00000020996.3 12697 5276 6 ENSG00000207693.1 MIR602 chr9 137838419 137838516 + miRNA KNOWN NA 98 98 1 ENSG00000203987.2 RP11-188C12.3 chr9 137867925 137892570 - antisense NOVEL OTTHUMG00000180102.1 24646 3373 6 ENSG00000148408.11 CACNA1B chr9 137877789 138124624 + protein_coding KNOWN OTTHUMG00000021002.2 246836 9897 284 ENSG00000276388.1 RP11-424E7.5 chr9 138129399 138129526 + unprocessed_pseudogene KNOWN OTTHUMG00000187874.1 128 128 1 ENSG00000229926.1 RP11-424E7.3 chr9 138137095 138143864 + unprocessed_pseudogene KNOWN OTTHUMG00000020997.1 6770 1213 8 ENSG00000159247.11 TUBBP5 chr9 138150113 138177369 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000021001.3 27257 2712 13 ENSG00000278130.1 RP11-424E7.6 chr9 138177426 138179774 - unprocessed_pseudogene KNOWN OTTHUMG00000187880.1 2349 872 6 ENSG00000237419.1 RP11-885N19.6 chr9 138199933 138203325 - lincRNA NOVEL OTTHUMG00000020999.1 3393 538 2 ENSG00000233013.7 FAM157B chr9 138216187 138252994 + lincRNA NOVEL OTTHUMG00000021000.2 36808 2233 16 ENSG00000272419.4 RP11-403I13.8 chr1 145164099 145216058 - processed_transcript NOVEL OTTHUMG00000041632.4 51960 6056 23 ENSG00000223256.1 RNU6-785P chr9 138259595 138259698 + snRNA KNOWN NA 104 104 1 ENSG00000250210.4 FO082796.1 chr9 138281751 138294550 + protein_coding NOVEL NA 12800 723 4 ENSG00000260370.1 RP11-631M21.1 chr10 14061 16544 - lincRNA NOVEL OTTHUMG00000174801.2 2484 390 4 ENSG00000237297.1 RP11-631M21.6 chr10 44712 46884 + unprocessed_pseudogene KNOWN OTTHUMG00000017522.1 2173 747 6 ENSG00000261456.4 TUBB8 chr10 46892 74163 - protein_coding KNOWN OTTHUMG00000174803.2 27272 2981 25 ENSG00000232420.2 IL9RP2 chr10 80394 86265 - unprocessed_pseudogene KNOWN OTTHUMG00000017525.1 5872 1312 7 ENSG00000015171.17 ZMYND11 chr10 134465 254637 + protein_coding KNOWN OTTHUMG00000017526.6 120173 5300 198 ENSG00000276662.1 RP11-631M21.7 chr10 147820 148751 - unprocessed_pseudogene KNOWN OTTHUMG00000187769.1 932 716 2 ENSG00000212331.1 RNA5SP297 chr10 154831 154943 - rRNA KNOWN NA 113 113 1 ENSG00000264544.2 AL589988.1 chr10 199882 199981 - miRNA NOVEL NA 100 100 1 ENSG00000277678.1 U1 chr1 145169519 145169664 + snRNA NOVEL NA 146 146 1 ENSG00000151240.14 DIP2C chr10 274190 689743 - protein_coding KNOWN OTTHUMG00000017532.4 415554 8608 88 ENSG00000264248.1 AL603831.1 chr10 277184 277308 + miRNA NOVEL NA 125 125 1 ENSG00000201861.1 RNA5SP298 chr10 282015 282125 - rRNA KNOWN NA 111 111 1 ENSG00000239822.3 RN7SL754P chr10 430239 430504 - misc_RNA KNOWN NA 266 266 1 ENSG00000233021.2 RP11-490E15.2 chr10 437561 441170 + antisense NOVEL OTTHUMG00000017527.2 3610 558 2 ENSG00000225140.1 RP11-809C18.3 chr10 628638 631255 + antisense NOVEL OTTHUMG00000017530.1 2618 1657 2 ENSG00000263511.1 MIR5699 chr10 641689 641778 - miRNA KNOWN NA 90 90 1 ENSG00000180525.11 PRR26 chr10 649948 669581 + protein_coding KNOWN OTTHUMG00000017529.4 19634 9247 8 ENSG00000231601.1 RP11-164C1.2 chr10 743992 744958 + lincRNA NOVEL OTTHUMG00000017531.2 967 424 2 ENSG00000107929.13 LARP4B chr10 806914 931705 - protein_coding KNOWN OTTHUMG00000017534.5 124792 12836 79 ENSG00000281571.1 AC241585.2 chr1 145214851 145215938 + protein_coding NOVEL NA 1088 1088 1 ENSG00000229869.1 RP11-363N22.2 chr10 933026 942743 + antisense NOVEL OTTHUMG00000017533.1 9718 407 3 ENSG00000205740.2 RP11-363N22.3 chr10 971146 988341 - processed_transcript NOVEL OTTHUMG00000187410.1 17196 4964 3 ENSG00000107937.17 GTPBP4 chr10 988019 1019936 + protein_coding KNOWN OTTHUMG00000017538.5 31918 6540 39 ENSG00000148377.5 IDI2 chr10 1018907 1025859 - protein_coding KNOWN OTTHUMG00000017537.1 6953 1359 5 ENSG00000232656.6 IDI2-AS1 chr10 1022666 1044201 + antisense KNOWN OTTHUMG00000017535.2 21536 1276 21 ENSG00000067064.9 IDI1 chr10 1039908 1049170 - protein_coding KNOWN OTTHUMG00000017536.2 9263 3589 19 ENSG00000047056.13 WDR37 chr10 1049538 1132297 + protein_coding KNOWN OTTHUMG00000017540.4 82760 5656 59 ENSG00000229205.2 LINC00200 chr10 1159768 1164672 + lincRNA KNOWN OTTHUMG00000017539.3 4905 2794 5 ENSG00000185736.14 ADARB2 chr10 1177318 1737476 - protein_coding KNOWN OTTHUMG00000017543.2 560159 10513 28 ENSG00000233052.1 RP11-398B16.2 chr10 1361001 1361637 - sense_intronic NOVEL OTTHUMG00000017541.1 637 359 2 ENSG00000223612.3 RP11-289I10.2 chr1 145233001 145233519 + processed_pseudogene KNOWN OTTHUMG00000078264.1 519 519 1 ENSG00000205696.4 ADARB2-AS1 chr10 1526637 1556984 + antisense KNOWN OTTHUMG00000017542.2 30348 1125 5 ENSG00000234962.4 LINC00700 chr10 2005473 2014348 - lincRNA NOVEL OTTHUMG00000017547.2 8876 2767 8 ENSG00000226694.2 RP11-69C17.2 chr10 2071845 2081097 + lincRNA NOVEL OTTHUMG00000017544.1 9253 432 2 ENSG00000278069.1 MIR6072 chr10 2076019 2076089 - miRNA KNOWN NA 71 71 1 ENSG00000252998.1 RNU6-889P chr10 2098167 2098269 + snRNA KNOWN NA 103 103 1 ENSG00000227912.1 RP11-69C17.3 chr10 2166332 2169460 + lincRNA NOVEL OTTHUMG00000017545.1 3129 2321 2 ENSG00000231326.5 RP11-69C17.4 chr10 2169140 2189474 - lincRNA NOVEL OTTHUMG00000017546.2 20335 587 7 ENSG00000212156.1 RNU6-576P chr10 2199387 2199488 + snRNA KNOWN NA 102 102 1 ENSG00000234556.1 LINC00701 chr10 2305083 2315075 - lincRNA NOVEL OTTHUMG00000017548.1 9993 742 3 ENSG00000234170.4 RP11-446F3.2 chr10 2446253 2447352 - lincRNA NOVEL OTTHUMG00000017549.1 1100 764 6 ENSG00000256374.2 PPIAL4D chr1 145241630 145242124 - protein_coding KNOWN OTTHUMG00000078265.2 495 495 1 ENSG00000264261.1 AC024908.1 chr10 2453135 2453224 - miRNA NOVEL NA 90 90 1 ENSG00000237500.1 RP11-526P5.1 chr10 2499721 2500570 + lincRNA NOVEL OTTHUMG00000017550.1 850 332 2 ENSG00000235281.1 RP11-526P5.2 chr10 2501783 2567239 + lincRNA NOVEL OTTHUMG00000017551.1 65457 1051 4 ENSG00000265463.2 AL355361.1 chr10 2789039 2789125 - miRNA NOVEL NA 87 87 1 ENSG00000231743.1 RP11-89K18.1 chr10 2936021 2936441 + processed_pseudogene KNOWN OTTHUMG00000017552.1 421 421 1 ENSG00000234182.1 RP11-118K6.2 chr10 3010531 3013111 + lincRNA NOVEL OTTHUMG00000017554.1 2581 608 3 ENSG00000273001.1 RP11-118K6.3 chr10 3065424 3066001 - lincRNA NOVEL OTTHUMG00000186076.1 578 578 1 ENSG00000067057.15 PFKP chr10 3066333 3137712 + protein_coding KNOWN OTTHUMG00000017556.5 71380 4836 96 ENSG00000278419.1 RP11-298E9.7 chr10 3134566 3145166 + antisense NOVEL OTTHUMG00000188640.1 10601 447 4 ENSG00000107959.14 PITRM1 chr10 3137728 3172841 - protein_coding KNOWN OTTHUMG00000017557.2 35114 6979 127 ENSG00000271291.1 RP11-289I10.3 chr1 145269604 145269890 - processed_pseudogene KNOWN OTTHUMG00000184370.1 287 287 1 ENSG00000237399.6 PITRM1-AS1 chr10 3141632 3167972 + antisense NOVEL OTTHUMG00000017558.3 26341 4370 12 ENSG00000236968.1 RP11-298E9.5 chr10 3223816 3227407 + lincRNA NOVEL OTTHUMG00000017561.1 3592 597 3 ENSG00000275926.1 AL451164.1 chr10 3234463 3234600 + miRNA NOVEL NA 138 138 1 ENSG00000226762.1 RP11-298E9.6 chr10 3240371 3257210 - lincRNA NOVEL OTTHUMG00000017555.1 16840 390 4 ENSG00000227338.1 RP11-195B3.1 chr10 3266003 3267015 + lincRNA NOVEL OTTHUMG00000017562.1 1013 463 2 ENSG00000233321.1 RP11-482E14.1 chr10 3486894 3502838 - lincRNA NOVEL OTTHUMG00000017563.1 15945 832 5 ENSG00000236892.1 RP11-482E14.2 chr10 3532094 3537031 - lincRNA NOVEL OTTHUMG00000017564.1 4938 723 4 ENSG00000229672.2 RP11-184A2.3 chr10 3751067 3763226 + antisense NOVEL OTTHUMG00000017566.2 12160 759 6 ENSG00000228353.1 RP11-184A2.2 chr10 3767915 3768751 + antisense NOVEL OTTHUMG00000017565.1 837 313 2 ENSG00000067082.13 KLF6 chr10 3775996 3785281 - protein_coding KNOWN OTTHUMG00000017567.1 9286 6139 20 ENSG00000207501.1 RNVU1-14 chr1 145281116 145281279 + snRNA KNOWN NA 164 164 1 ENSG00000230573.1 RP11-464C19.2 chr10 3833950 3834728 + lincRNA NOVEL OTTHUMG00000017568.1 779 536 2 ENSG00000226005.3 RP11-464C19.3 chr10 3934519 3935813 + lincRNA NOVEL OTTHUMG00000017569.2 1295 591 2 ENSG00000274809.1 MIR6078 chr10 3991160 3991259 + miRNA KNOWN NA 100 100 1 ENSG00000227101.1 RP11-433J20.2 chr10 4024940 4028394 + lincRNA NOVEL OTTHUMG00000017570.1 3455 633 2 ENSG00000236990.1 RP11-433J20.1 chr10 4051726 4089013 + lincRNA NOVEL OTTHUMG00000017571.1 37288 2287 4 ENSG00000233117.2 LINC00702 chr10 4201141 4243912 - lincRNA NOVEL OTTHUMG00000017572.3 42772 6785 7 ENSG00000224382.1 LINC00703 chr10 4384246 4410612 + lincRNA NOVEL OTTHUMG00000017573.1 26367 2462 4 ENSG00000230096.1 RP11-34C15.2 chr10 4415305 4426179 - lincRNA NOVEL OTTHUMG00000017574.1 10875 691 4 ENSG00000207124.1 RNU6-163P chr10 4514952 4515057 + snRNA KNOWN NA 106 106 1 ENSG00000231298.5 LINC00704 chr10 4650185 4678154 - lincRNA NOVEL OTTHUMG00000017576.2 27970 1920 12 ENSG00000276216.1 CH17-373J23.1 chr1 145281116 145281462 + lincRNA NOVEL OTTHUMG00000188659.1 347 347 1 ENSG00000225269.2 LINC00705 chr10 4655427 4662419 + lincRNA NOVEL OTTHUMG00000017575.1 6993 1745 3 ENSG00000165568.16 AKR1E2 chr10 4786629 4848062 + protein_coding KNOWN OTTHUMG00000017577.10 61434 2417 87 ENSG00000151631.8 AKR1C6P chr10 4871901 4891975 - unprocessed_pseudogene KNOWN OTTHUMG00000017578.1 20075 983 9 ENSG00000151632.15 AKR1C2 chr10 4922564 5135226 - protein_coding KNOWN OTTHUMG00000017584.3 212663 6703 63 ENSG00000238840.1 U8 chr10 4962436 4962568 - snoRNA NOVEL NA 133 133 1 ENSG00000187134.11 AKR1C1 chr10 4963253 5107522 + protein_coding KNOWN OTTHUMG00000017580.2 144270 8834 41 ENSG00000224251.5 RP11-499O7.7 chr10 4995488 4997380 + antisense NOVEL OTTHUMG00000017586.2 1893 482 6 ENSG00000239148.1 U8 chr10 5004710 5004842 + snoRNA NOVEL NA 133 133 1 ENSG00000196139.10 AKR1C3 chr10 5035354 5107686 + protein_coding KNOWN OTTHUMG00000017585.4 72333 4555 60 ENSG00000237831.1 RP11-499O7.4 chr10 5048812 5051670 + unprocessed_pseudogene KNOWN OTTHUMG00000017582.1 2859 125 2 ENSG00000236140.1 RP11-89F3.2 chr1 145286610 145287755 - lincRNA NOVEL OTTHUMG00000042457.1 1146 381 2 ENSG00000239142.1 U8 chr10 5093408 5093543 - snoRNA NOVEL NA 136 136 1 ENSG00000225418.1 AKR1C5P chr10 5122087 5135226 - unprocessed_pseudogene KNOWN OTTHUMG00000017583.1 13140 609 5 ENSG00000264006.5 AKR1C8P chr10 5154143 5185187 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000184213.1 31045 2222 17 ENSG00000198610.9 AKR1C4 chr10 5195462 5218949 + protein_coding KNOWN OTTHUMG00000017591.2 23488 1914 22 ENSG00000228291.1 RP11-445P17.6 chr10 5207169 5207742 + processed_pseudogene KNOWN OTTHUMG00000017589.1 574 574 1 ENSG00000231039.2 RP11-445P17.3 chr10 5234358 5263408 + lincRNA NOVEL OTTHUMG00000017587.2 29051 680 2 ENSG00000224034.1 RP11-445P17.8 chr10 5266033 5271236 - lincRNA NOVEL OTTHUMG00000017590.1 5204 692 2 ENSG00000215267.7 AKR1C7P chr10 5275173 5288470 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000017588.3 13298 895 14 ENSG00000223987.1 RP11-445P17.5 chr10 5304431 5304865 - processed_pseudogene KNOWN OTTHUMG00000017593.1 435 435 1 ENSG00000280450.1 XXyac-YR21CG7.1 chr10 5346651 5347277 + TEC KNOWN OTTHUMG00000176122.1 627 627 1 ENSG00000234619.1 RPL7P11 chr1 8750430 8751087 + processed_pseudogene KNOWN OTTHUMG00000001774.1 658 658 1 ENSG00000162825.15 NBPF8 chr1 145289900 145405778 - protein_coding KNOWN OTTHUMG00000042439.6 115879 18995 334 ENSG00000178473.6 UCN3 chr10 5365009 5374692 + protein_coding KNOWN OTTHUMG00000017594.2 9684 1200 2 ENSG00000178462.10 TUBAL3 chr10 5393098 5404830 - protein_coding KNOWN OTTHUMG00000017595.3 11733 1798 8 ENSG00000173848.17 NET1 chr10 5412551 5458463 + protein_coding KNOWN OTTHUMG00000017596.3 45913 4175 35 ENSG00000178372.7 CALML5 chr10 5498697 5499555 - protein_coding KNOWN OTTHUMG00000017598.1 859 859 1 ENSG00000205488.7 CALML3-AS1 chr10 5514244 5526246 - antisense NOVEL OTTHUMG00000168090.1 12003 4757 9 ENSG00000178363.4 CALML3 chr10 5524009 5526771 + protein_coding KNOWN OTTHUMG00000017597.1 2763 2763 1 ENSG00000256462.1 RP11-116G8.5 chr10 5524976 5525742 - antisense NOVEL OTTHUMG00000168091.1 767 595 2 ENSG00000242147.1 RP13-463N16.6 chr10 5594991 5596118 - lincRNA NOVEL OTTHUMG00000017601.3 1128 697 2 ENSG00000231483.1 RP11-336A10.5 chr10 5608475 5610793 - lincRNA NOVEL OTTHUMG00000017600.1 2319 613 5 ENSG00000228951.1 RP11-336A10.4 chr10 5616862 5618161 - lincRNA NOVEL OTTHUMG00000017599.1 1300 657 3 ENSG00000234367.1 PFN1P3 chr1 145407772 145408173 + processed_pseudogene KNOWN OTTHUMG00000043046.1 402 402 1 ENSG00000228685.1 RP11-336A10.7 chr10 5624931 5625126 + processed_pseudogene KNOWN OTTHUMG00000017602.1 196 196 1 ENSG00000240577.3 RN7SL445P chr10 5631463 5631755 + misc_RNA KNOWN NA 293 293 1 ENSG00000196372.11 ASB13 chr10 5638867 5666595 - protein_coding KNOWN OTTHUMG00000017603.3 27729 3003 23 ENSG00000108021.18 FAM208B chr10 5684838 5763740 + protein_coding KNOWN OTTHUMG00000017605.3 78903 10960 59 ENSG00000226647.2 RP11-336A10.2 chr10 5712174 5744067 - antisense NOVEL OTTHUMG00000017604.2 31894 1412 4 ENSG00000057608.15 GDI2 chr10 5765223 5842132 - protein_coding KNOWN OTTHUMG00000017607.8 76910 4033 58 ENSG00000270427.1 NRBF2P5 chr10 5776071 5776858 + processed_pseudogene KNOWN OTTHUMG00000184677.1 788 788 1 ENSG00000272764.1 RP11-318E3.9 chr10 5813985 5814441 + lincRNA NOVEL OTTHUMG00000186103.1 457 276 2 ENSG00000134461.14 ANKRD16 chr10 5861617 5889906 - protein_coding KNOWN OTTHUMG00000017610.3 28290 3059 25 ENSG00000240180.1 RP11-318E3.4 chr10 5861805 5862594 - processed_pseudogene KNOWN OTTHUMG00000017606.2 790 489 2 ENSG00000270384.1 U1 chr1 145431527 145431693 - snRNA NOVEL NA 167 167 1 ENSG00000134452.18 FBXO18 chr10 5890203 5937594 + protein_coding KNOWN OTTHUMG00000017609.5 47392 6676 112 ENSG00000232807.2 RP11-536K7.3 chr10 5934270 5945900 - antisense NOVEL OTTHUMG00000017611.2 11631 3912 6 ENSG00000134470.18 IL15RA chr10 5937569 5978187 - protein_coding KNOWN OTTHUMG00000017612.5 40619 3740 145 ENSG00000134460.14 IL2RA chr10 6010689 6062325 - protein_coding KNOWN OTTHUMG00000017616.1 51637 3176 26 ENSG00000251922.1 SNORA14 chr10 6017054 6017194 - snoRNA NOVEL NA 141 141 1 ENSG00000229664.1 RP11-536K7.5 chr10 6025978 6036427 + antisense NOVEL OTTHUMG00000017608.1 10450 480 3 ENSG00000214015.3 RP11-414H17.2 chr10 6071514 6071918 - processed_pseudogene KNOWN OTTHUMG00000017619.1 405 405 1 ENSG00000134453.14 RBM17 chr10 6088987 6117457 + protein_coding KNOWN OTTHUMG00000017618.2 28471 6419 66 ENSG00000170525.17 PFKFB3 chr10 6144934 6235545 + protein_coding KNOWN OTTHUMG00000017621.3 90612 5481 210 ENSG00000201581.1 RN7SKP78 chr10 6149623 6149940 + misc_RNA KNOWN NA 318 318 1 ENSG00000270722.1 U1 chr1 145465617 145465780 - snRNA NOVEL NA 164 164 1 ENSG00000263628.1 MIR3155A chr10 6152196 6152277 + miRNA KNOWN NA 82 82 1 ENSG00000213994.3 RP11-414H17.5 chr10 6197612 6202693 - antisense NOVEL OTTHUMG00000017613.1 5082 438 2 ENSG00000238366.1 Y_RNA chr10 6245731 6245831 - misc_RNA NOVEL NA 101 101 1 ENSG00000215244.2 RP11-563J2.2 chr10 6277687 6335982 + lincRNA NOVEL OTTHUMG00000186111.1 58296 3086 7 ENSG00000226705.1 SDCBPP1 chr10 6293100 6294684 - processed_pseudogene KNOWN OTTHUMG00000017620.1 1585 890 4 ENSG00000212743.2 RP11-563J2.3 chr10 6350316 6352762 + lincRNA NOVEL OTTHUMG00000187413.1 2447 2447 1 ENSG00000065675.13 PRKCQ chr10 6427143 6580301 - protein_coding KNOWN OTTHUMG00000017623.1 153159 3295 69 ENSG00000237943.5 PRKCQ-AS1 chr10 6580419 6616452 + processed_transcript NOVEL OTTHUMG00000017622.4 36034 3892 82 ENSG00000225948.2 RP11-554I8.1 chr10 6618716 6625346 + lincRNA NOVEL OTTHUMG00000017624.2 6631 500 4 ENSG00000281532.1 AL158210.1 chr10 6655662 6655798 + miRNA NOVEL NA 137 137 1 ENSG00000278182.1 CH17-262O2.2 chr1 145507444 145508607 + unprocessed_pseudogene KNOWN OTTHUMG00000188660.1 1164 270 2 ENSG00000223784.1 RP11-554I8.2 chr10 6737382 6739026 + lincRNA NOVEL OTTHUMG00000017625.1 1645 917 2 ENSG00000281186.1 LINC00706 chr10 6774307 6779180 - lincRNA KNOWN OTTHUMG00000189562.1 4874 699 2 ENSG00000238266.1 LINC00707 chr10 6779598 6842906 + lincRNA NOVEL OTTHUMG00000017627.1 63309 3070 5 ENSG00000234248.1 RP11-799O21.2 chr10 6891457 6920472 - lincRNA NOVEL OTTHUMG00000017626.1 29016 299 3 ENSG00000223581.1 RP11-393K12.2 chr10 7097152 7097675 + lincRNA NOVEL OTTHUMG00000017628.1 524 436 2 ENSG00000270811.1 RP11-393K12.4 chr10 7154120 7154236 + processed_pseudogene KNOWN OTTHUMG00000184676.1 117 117 1 ENSG00000198879.10 SFMBT2 chr10 7158624 7411486 - protein_coding KNOWN OTTHUMG00000017630.2 252863 9953 52 ENSG00000235141.1 COX6CP17 chr10 7295106 7295290 - processed_pseudogene KNOWN OTTHUMG00000017629.1 185 185 1 ENSG00000278982.1 RP5-1031D4.3 chr10 7411599 7413467 + TEC KNOWN OTTHUMG00000176128.1 1869 1869 1 ENSG00000232591.1 RP5-1031D4.2 chr10 7445558 7471942 - lincRNA NOVEL OTTHUMG00000017631.1 26385 557 4 ENSG00000275064.1 CH17-262O2.1 chr1 145509047 145520594 + unprocessed_pseudogene KNOWN OTTHUMG00000188661.1 11548 1270 9 ENSG00000207453.1 RNU6-535P chr10 7486703 7486809 - snRNA KNOWN NA 107 107 1 ENSG00000230121.1 RP11-385N23.1 chr10 7533207 7536565 + antisense NOVEL OTTHUMG00000017632.1 3359 714 3 ENSG00000123243.13 ITIH5 chr10 7559270 7666998 - protein_coding KNOWN OTTHUMG00000017635.6 107729 14628 67 ENSG00000151655.16 ITIH2 chr10 7703269 7749520 + protein_coding KNOWN OTTHUMG00000017633.3 46252 3378 85 ENSG00000151657.10 KIN chr10 7750962 7787981 - protein_coding KNOWN OTTHUMG00000017634.4 37020 6844 36 ENSG00000165629.18 ATP5C1 chr10 7788129 7807815 + protein_coding KNOWN OTTHUMG00000017639.2 19687 2326 57 ENSG00000165632.7 TAF3 chr10 7818504 8016627 + protein_coding KNOWN OTTHUMG00000017643.1 198124 4872 7 ENSG00000233990.1 RP11-401E9.3 chr10 7833618 7833957 - processed_pseudogene KNOWN OTTHUMG00000017638.1 340 340 1 ENSG00000197308.7 GATA3-AS1 chr10 8050450 8053484 - lincRNA NOVEL OTTHUMG00000156966.1 3035 2214 8 ENSG00000232638.1 RP11-379F12.4 chr10 8051541 8053084 + lincRNA NOVEL OTTHUMG00000017642.1 1544 402 3 ENSG00000272150.4 NBPF25P chr1 145572345 145607858 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000188662.2 35514 3827 35 ENSG00000243350.1 RP11-379F12.3 chr10 8052242 8053449 - lincRNA NOVEL OTTHUMG00000017641.1 1208 821 4 ENSG00000107485.14 GATA3 chr10 8053604 8075198 + protein_coding KNOWN OTTHUMG00000017640.1 21595 3253 17 ENSG00000225053.1 PRPF38AP1 chr10 8161260 8162192 + processed_pseudogene KNOWN OTTHUMG00000017644.1 933 933 1 ENSG00000232170.4 LINC00708 chr10 8259331 8268305 - lincRNA NOVEL OTTHUMG00000017645.1 8975 916 7 ENSG00000226861.1 RP5-1119O21.2 chr10 8298897 8301667 + lincRNA NOVEL OTTHUMG00000017646.1 2771 901 2 ENSG00000226990.1 RP11-543F8.2 chr10 8400860 8461863 + lincRNA NOVEL OTTHUMG00000017648.1 61004 430 4 ENSG00000271251.1 RP11-543F8.3 chr10 8472719 8472952 + processed_pseudogene KNOWN OTTHUMG00000184675.1 234 234 1 ENSG00000213771.3 KRT8P37 chr10 8513687 8515106 - processed_pseudogene KNOWN OTTHUMG00000017647.1 1420 1420 1 ENSG00000236420.1 CHCHD3P1 chr10 8619933 8620608 + processed_pseudogene KNOWN OTTHUMG00000017649.1 676 676 1 ENSG00000212505.1 RNA5SP299 chr10 8656716 8656831 - rRNA KNOWN NA 116 116 1 ENSG00000117262.17 GPR89A chr1 145607990 145670648 + protein_coding KNOWN OTTHUMG00000013738.5 62659 5557 110 ENSG00000270234.1 RP11-575N15.1 chr10 8724010 8724288 + processed_pseudogene KNOWN OTTHUMG00000184672.1 279 279 1 ENSG00000234752.1 RP11-428L9.1 chr10 8897989 8914596 + lincRNA NOVEL OTTHUMG00000017650.1 16608 366 4 ENSG00000223808.1 RP11-428L9.2 chr10 8970125 8973468 + lincRNA NOVEL OTTHUMG00000017651.1 3344 677 2 ENSG00000230014.1 LINC00709 chr10 9275833 9287057 + lincRNA NOVEL OTTHUMG00000017652.1 11225 494 2 ENSG00000235838.1 HSP90AB7P chr10 9721963 9724416 - processed_pseudogene KNOWN OTTHUMG00000017653.1 2454 2454 1 ENSG00000228636.1 RP5-1051H14.2 chr10 9758783 9759237 - lincRNA NOVEL OTTHUMG00000017654.1 455 344 2 ENSG00000224788.1 RP5-933E2.1 chr10 10058722 10063502 + lincRNA NOVEL OTTHUMG00000017655.1 4781 575 4 ENSG00000229919.3 TCEB1P3 chr10 10174230 10174577 + processed_pseudogene KNOWN OTTHUMG00000017656.1 348 348 1 ENSG00000200849.1 Y_RNA chr10 10232611 10232712 + misc_RNA NOVEL NA 102 102 1 ENSG00000272436.1 CUX2P1 chr10 10257169 10257466 - processed_pseudogene KNOWN OTTHUMG00000185574.1 298 298 1 ENSG00000174827.12 PDZK1 chr1 145670852 145708148 - protein_coding KNOWN OTTHUMG00000013735.7 37297 2480 45 ENSG00000234306.1 RP11-271F18.1 chr10 10365180 10366487 - lincRNA NOVEL OTTHUMG00000017657.1 1308 335 2 ENSG00000279575.1 RP11-271F18.3 chr10 10394670 10395737 + TEC KNOWN OTTHUMG00000176129.1 1068 1068 1 ENSG00000270111.1 RP11-271F18.4 chr10 10419538 10462349 - lincRNA NOVEL OTTHUMG00000183907.1 42812 505 4 ENSG00000228997.1 RP1-186E20.1 chr10 10776223 10776661 - processed_pseudogene KNOWN OTTHUMG00000017659.1 439 439 1 ENSG00000225383.5 SFTA1P chr10 10784437 10794980 - lincRNA NOVEL OTTHUMG00000017660.3 10544 781 15 ENSG00000229240.6 LINC00710 chr10 10917880 10952234 - processed_transcript KNOWN OTTHUMG00000017661.6 34355 3868 66 ENSG00000231496.1 RP1-251M9.2 chr10 10960151 10970816 + lincRNA NOVEL OTTHUMG00000017662.1 10666 537 3 ENSG00000048740.16 CELF2 chr10 11005296 11336675 + protein_coding KNOWN OTTHUMG00000017668.5 331380 9837 103 ENSG00000228027.1 RP1-251M9.3 chr10 11010164 11011119 - antisense NOVEL OTTHUMG00000017663.1 956 244 2 ENSG00000229206.3 RP11-397O4.1 chr10 11030334 11030868 - lincRNA NOVEL OTTHUMG00000017664.3 535 433 2 ENSG00000117281.14 CD160 chr1 145719471 145739288 + protein_coding KNOWN OTTHUMG00000013749.4 19818 3971 19 ENSG00000237986.2 CELF2-AS2 chr10 11075131 11098473 - antisense NOVEL OTTHUMG00000017665.2 23343 853 6 ENSG00000230322.1 RP3-323N1.2 chr10 11168922 11171376 - antisense NOVEL OTTHUMG00000017666.1 2455 430 2 ENSG00000181800.5 CELF2-AS1 chr10 11316834 11319884 - antisense KNOWN OTTHUMG00000017669.1 3051 2468 2 ENSG00000280086.1 RP11-544P1.3 chr10 11395808 11398792 + TEC KNOWN OTTHUMG00000176132.1 2985 2985 1 ENSG00000148429.13 USP6NL chr10 11453946 11611754 - protein_coding KNOWN OTTHUMG00000017672.6 157809 14202 50 ENSG00000271360.1 RP11-138I18.1 chr10 11611305 11612227 + antisense NOVEL OTTHUMG00000185156.1 923 923 1 ENSG00000271046.1 RP11-138I18.2 chr10 11679675 11680514 + lincRNA NOVEL OTTHUMG00000185157.1 840 840 1 ENSG00000134463.13 ECHDC3 chr10 11742366 11764070 + protein_coding KNOWN OTTHUMG00000017675.1 21705 2185 22 ENSG00000148426.11 PROSER2 chr10 11823339 11872277 + protein_coding KNOWN OTTHUMG00000017673.4 48939 3663 17 ENSG00000225778.4 PROSER2-AS1 chr10 11849608 11894700 - antisense NOVEL OTTHUMG00000017674.2 45093 3274 10 ENSG00000224315.2 RPL7P7 chr1 8786211 8786913 - processed_pseudogene KNOWN OTTHUMG00000001775.2 703 703 1 ENSG00000265491.4 RNF115 chr1 145738868 145824077 - protein_coding KNOWN OTTHUMG00000013758.6 85210 11041 15 ENSG00000151461.18 UPF2 chr10 11920022 12043170 - protein_coding KNOWN OTTHUMG00000017678.2 123149 5906 67 ENSG00000251957.1 RNU6-1095P chr10 11923181 11923288 + snRNA KNOWN NA 108 108 1 ENSG00000273781.1 AL138898.1 chr10 11927351 11927441 - miRNA NOVEL NA 91 91 1 ENSG00000181192.10 DHTKD1 chr10 12068972 12123225 + protein_coding KNOWN OTTHUMG00000017677.2 54254 5281 37 ENSG00000272507.1 U6 chr10 12116280 12116379 - snRNA NOVEL NA 100 100 1 ENSG00000065665.19 SEC61A2 chr10 12129637 12169961 + protein_coding KNOWN OTTHUMG00000017679.6 40325 3916 116 ENSG00000265653.1 MIR548AK chr10 12130760 12130816 - miRNA KNOWN NA 57 57 1 ENSG00000165609.11 NUDT5 chr10 12165325 12196144 - protein_coding KNOWN OTTHUMG00000017682.4 30820 4969 73 ENSG00000151465.12 CDC123 chr10 12195965 12250589 + protein_coding KNOWN OTTHUMG00000017680.5 54625 2404 71 ENSG00000228302.2 RP11-186N15.3 chr10 12244751 12247845 - antisense NOVEL OTTHUMG00000017681.2 3095 2510 4 ENSG00000186141.7 POLR3C chr1 145824088 145842505 + protein_coding KNOWN OTTHUMG00000013753.3 18418 2793 51 ENSG00000264036.2 RN7SL198P chr10 12328132 12328389 - misc_RNA KNOWN NA 258 258 1 ENSG00000183049.11 CAMK1D chr10 12349482 12835545 + protein_coding KNOWN OTTHUMG00000017683.3 486064 8762 32 ENSG00000252438.1 SNORD45 chr10 12415928 12416000 + snoRNA NOVEL NA 73 73 1 ENSG00000252118.1 RNU6ATAC39P chr10 12456483 12456631 + snRNA KNOWN NA 149 149 1 ENSG00000263584.1 MIR4480 chr10 12578753 12578823 + miRNA KNOWN NA 71 71 1 ENSG00000221331.1 MIR548Q chr10 12725254 12725353 - miRNA KNOWN NA 100 100 1 ENSG00000151468.10 CCDC3 chr10 12896625 13099652 - protein_coding KNOWN OTTHUMG00000017689.2 203028 3683 10 ENSG00000212499.1 RNA5SP300 chr10 12924679 12924785 - rRNA KNOWN NA 107 107 1 ENSG00000225251.1 RPL5P25 chr10 13057902 13058676 - processed_pseudogene KNOWN OTTHUMG00000017691.1 775 775 1 ENSG00000123240.15 OPTN chr10 13099449 13138308 + protein_coding KNOWN OTTHUMG00000017690.6 38860 5138 114 ENSG00000186364.10 NUDT17 chr1 145845629 145848953 + protein_coding KNOWN OTTHUMG00000013752.4 3325 1657 27 ENSG00000235763.1 SNRPGP5 chr10 13104574 13104793 - processed_pseudogene KNOWN OTTHUMG00000017684.1 220 220 1 ENSG00000234175.1 RP11-730A19.9 chr10 13139196 13139533 - processed_pseudogene KNOWN OTTHUMG00000017688.2 338 338 1 ENSG00000228330.1 RP11-730A19.5 chr10 13142185 13142977 - processed_pseudogene KNOWN OTTHUMG00000017685.1 793 793 1 ENSG00000203414.2 BTBD7P1 chr10 13156684 13158136 - processed_pseudogene KNOWN OTTHUMG00000017686.1 1453 1453 1 ENSG00000237540.1 RP11-730A19.7 chr10 13159477 13159777 - processed_pseudogene KNOWN OTTHUMG00000017687.1 301 301 1 ENSG00000065328.15 MCM10 chr10 13161554 13211104 + protein_coding KNOWN OTTHUMG00000017694.2 49551 5454 70 ENSG00000272055.1 RNU6-1 chr10 13217269 13217375 + snRNA KNOWN NA 107 107 1 ENSG00000165623.8 UCMA chr10 13221767 13234334 - protein_coding KNOWN OTTHUMG00000017692.3 12568 829 9 ENSG00000107537.12 PHYH chr10 13277796 13302412 - protein_coding KNOWN OTTHUMG00000017693.9 24617 3381 44 ENSG00000226209.1 C8orf59P1 chr10 13308145 13308447 - processed_pseudogene KNOWN OTTHUMG00000187414.1 303 303 1 ENSG00000131788.14 PIAS3 chr1 145848522 145859836 - protein_coding KNOWN OTTHUMG00000013750.12 11315 4805 66 ENSG00000086475.13 SEPHS1 chr10 13317424 13348298 - protein_coding KNOWN OTTHUMG00000017696.2 30875 3888 36 ENSG00000233256.1 RP11-445K13.2 chr10 13415202 13423133 + antisense NOVEL OTTHUMG00000017697.1 7932 454 2 ENSG00000165626.15 BEND7 chr10 13438484 13528974 - protein_coding KNOWN OTTHUMG00000017699.1 90491 9815 41 ENSG00000202508.1 Y_RNA chr10 13511206 13511313 - misc_RNA NOVEL NA 108 108 1 ENSG00000227175.1 RP11-214D15.2 chr10 13528516 13530262 + antisense NOVEL OTTHUMG00000017698.1 1747 380 2 ENSG00000165630.12 PRPF18 chr10 13586927 13630868 + protein_coding KNOWN OTTHUMG00000017702.1 43942 1865 27 ENSG00000227474.1 RP11-295P9.2 chr10 13591460 13592323 - processed_pseudogene KNOWN OTTHUMG00000017700.1 864 864 1 ENSG00000239665.7 RP11-295P9.3 chr10 13610047 13668445 + protein_coding NOVEL OTTHUMG00000017701.6 58399 16227 274 ENSG00000151474.18 FRMD4A chr10 13643706 14462142 - protein_coding KNOWN OTTHUMG00000017708.3 818437 12499 99 ENSG00000273474.1 RP11-295P9.12 chr10 13675646 13675990 + antisense NOVEL OTTHUMG00000186161.1 345 345 1 ENSG00000278549.1 MIR6736 chr1 145850587 145850645 - miRNA KNOWN NA 59 59 1 ENSG00000268549.1 RP11-295P9.8 chr10 13682521 13684874 + antisense NOVEL OTTHUMG00000182543.1 2354 1978 2 ENSG00000222235.1 AL157392.1 chr10 13704978 13705072 + miRNA NOVEL NA 95 95 1 ENSG00000225112.1 RP11-295P9.6 chr10 13710415 13712054 + antisense NOVEL OTTHUMG00000017703.1 1640 373 2 ENSG00000199407.1 RNA5SP301 chr10 13727796 13727916 + rRNA KNOWN NA 121 121 1 ENSG00000234091.1 RP11-353M9.1 chr10 13729383 13756200 + antisense NOVEL OTTHUMG00000017704.1 26818 474 3 ENSG00000215227.4 NUTF2P5 chr10 13870797 13871175 + processed_pseudogene KNOWN OTTHUMG00000017705.1 379 379 1 ENSG00000229751.1 RP11-142M10.2 chr10 13991815 14007526 + antisense NOVEL OTTHUMG00000017706.1 15712 570 3 ENSG00000235410.1 RP11-397C18.2 chr10 14074284 14087605 + antisense NOVEL OTTHUMG00000017707.1 13322 790 3 ENSG00000266321.1 MIR4293 chr10 14383200 14383277 - miRNA KNOWN NA 78 78 1 ENSG00000278100.1 Metazoa_SRP chr10 14391875 14392196 + misc_RNA NOVEL NA 322 322 1 ENSG00000198483.11 ANKRD35 chr1 145866560 145885866 - protein_coding KNOWN OTTHUMG00000013743.2 19307 3363 26 ENSG00000221371.1 MIR1265 chr10 14436576 14436661 + miRNA KNOWN NA 86 86 1 ENSG00000065809.12 FAM107B chr10 14518557 14774897 - protein_coding KNOWN OTTHUMG00000017709.3 256341 7019 121 ENSG00000236495.1 RP11-7C6.1 chr10 14652742 14661691 + antisense NOVEL OTTHUMG00000017710.1 8950 357 3 ENSG00000201766.1 RNA5SP302 chr10 14663395 14663494 - rRNA KNOWN NA 100 100 1 ENSG00000237032.1 RP11-398C13.2 chr10 14723171 14724055 - processed_pseudogene KNOWN OTTHUMG00000017711.1 885 885 1 ENSG00000185267.8 CDNF chr10 14819250 14838575 - protein_coding KNOWN OTTHUMG00000017713.2 19326 1733 21 ENSG00000187522.12 HSPA14 chr10 14838164 14871741 + protein_coding KNOWN OTTHUMG00000017712.2 33578 4818 36 ENSG00000272853.1 RP11-398C13.6 chr10 14877688 14878686 - lincRNA NOVEL OTTHUMG00000186172.1 999 999 1 ENSG00000152455.14 SUV39H2 chr10 14878820 14904315 + protein_coding KNOWN OTTHUMG00000017718.2 25496 3565 37 ENSG00000152457.16 DCLRE1C chr10 14897359 14954432 - protein_coding KNOWN OTTHUMG00000017716.2 57074 6326 170 ENSG00000143127.11 ITGA10 chr1 145891208 145910189 - protein_coding KNOWN OTTHUMG00000013751.3 18982 6320 62 ENSG00000197889.8 MEIG1 chr10 14959439 14988050 + protein_coding KNOWN OTTHUMG00000017717.2 28612 1407 13 ENSG00000235623.2 OR7E110P chr10 14986942 14987515 - unprocessed_pseudogene KNOWN OTTHUMG00000017715.2 574 574 1 ENSG00000228547.5 OR7E26P chr10 14999050 15000055 - unprocessed_pseudogene KNOWN OTTHUMG00000017721.2 1006 1006 1 ENSG00000182531.7 OR7E115P chr10 15007861 15008884 - unprocessed_pseudogene KNOWN OTTHUMG00000017719.2 1024 1024 1 ENSG00000237470.3 DCLRE1CP1 chr10 15015370 15021863 - unprocessed_pseudogene KNOWN OTTHUMG00000017720.1 6494 470 5 ENSG00000152463.13 OLAH chr10 15032227 15073852 + protein_coding KNOWN OTTHUMG00000017724.1 41626 2364 44 ENSG00000176244.6 ACBD7 chr10 15077523 15088776 - protein_coding KNOWN OTTHUMG00000017725.2 11254 1498 8 ENSG00000228312.1 GAPDHP45 chr10 15093263 15093611 - processed_pseudogene KNOWN OTTHUMG00000017726.1 349 349 1 ENSG00000176236.6 C10orf111 chr10 15095385 15097319 - antisense KNOWN OTTHUMG00000017727.1 1935 1714 2 ENSG00000152464.13 RPP38 chr10 15097180 15139818 + protein_coding KNOWN OTTHUMG00000017728.2 42639 1930 20 ENSG00000244619.2 RP11-315I20.3 chr1 145892847 145893483 + antisense NOVEL OTTHUMG00000042455.2 637 408 2 ENSG00000152465.16 NMT2 chr10 15102584 15168693 - protein_coding KNOWN OTTHUMG00000017723.2 66110 4700 36 ENSG00000206448.3 PPIAP30 chr10 15154802 15155320 - processed_pseudogene KNOWN OTTHUMG00000017730.1 519 519 1 ENSG00000228181.1 RP11-455B2.9 chr10 15171036 15171278 - processed_pseudogene KNOWN OTTHUMG00000017722.1 243 243 1 ENSG00000148468.15 FAM171A1 chr10 15211643 15371062 - protein_coding KNOWN OTTHUMG00000017732.2 159420 3955 15 ENSG00000232739.1 RP11-25G10.2 chr10 15237492 15241767 + antisense NOVEL OTTHUMG00000017731.1 4276 794 2 ENSG00000077943.7 ITGA8 chr10 15513949 15720125 - protein_coding KNOWN OTTHUMG00000017733.1 206177 7528 36 ENSG00000148481.12 FAM188A chr10 15778170 15860520 - protein_coding KNOWN OTTHUMG00000017734.2 82351 4094 52 ENSG00000252537.1 SNORA31 chr10 16005808 16005923 + snoRNA NOVEL NA 116 116 1 ENSG00000237913.1 FTLP19 chr10 16071416 16071809 - processed_pseudogene KNOWN OTTHUMG00000017735.1 394 394 1 ENSG00000201260.1 RNU6-1075P chr10 16207821 16207927 - snRNA KNOWN NA 107 107 1 ENSG00000131779.9 PEX11B chr1 145911350 145918837 - protein_coding KNOWN OTTHUMG00000013756.2 7488 1838 10 ENSG00000226140.4 RP11-461K13.1 chr10 16278701 16295858 + lincRNA NOVEL OTTHUMG00000017736.1 17158 605 7 ENSG00000165983.13 PTER chr10 16436943 16513745 + protein_coding KNOWN OTTHUMG00000017737.2 76803 4003 20 ENSG00000223156.1 RNU2-18P chr10 16476003 16476164 + snRNA KNOWN NA 162 162 1 ENSG00000165985.9 C1QL3 chr10 16513743 16522005 - protein_coding KNOWN OTTHUMG00000017738.1 8263 2493 5 ENSG00000148484.16 RSU1 chr10 16590611 16817528 - protein_coding KNOWN OTTHUMG00000017740.4 226918 4191 41 ENSG00000225213.2 RP11-197M22.2 chr10 16721352 16748377 - sense_intronic NOVEL OTTHUMG00000017739.3 27026 697 3 ENSG00000275001.1 uc_338 chr10 16767235 16767416 + misc_RNA NOVEL NA 182 182 1 ENSG00000107611.13 CUBN chr10 16823964 17129831 - protein_coding KNOWN OTTHUMG00000017741.1 305868 13168 80 ENSG00000273153.1 RP11-406H21.2 chr10 17137336 17137585 - lincRNA NOVEL OTTHUMG00000186173.1 250 250 1 ENSG00000107614.20 TRDMT1 chr10 17142254 17202054 - protein_coding KNOWN OTTHUMG00000017745.11 59801 10535 75 ENSG00000211451.10 GNRHR2 chr1 145919013 145925341 + unitary_pseudogene KNOWN OTTHUMG00000013742.5 6329 2497 15 ENSG00000229124.5 VIM-AS1 chr10 17214239 17229985 - antisense NOVEL OTTHUMG00000017743.2 15747 1992 7 ENSG00000026025.12 VIM chr10 17228259 17237593 + protein_coding KNOWN OTTHUMG00000017744.3 9335 4965 48 ENSG00000234961.1 RP11-124N14.3 chr10 17233325 17234833 - antisense NOVEL OTTHUMG00000017742.1 1509 706 2 ENSG00000148488.14 ST8SIA6 chr10 17318383 17454330 - protein_coding KNOWN OTTHUMG00000017748.1 135948 2627 12 ENSG00000204832.8 ST8SIA6-AS1 chr10 17386936 17413503 + antisense NOVEL OTTHUMG00000017746.2 26568 2022 12 ENSG00000251803.1 Y_RNA chr10 17403508 17403620 + misc_RNA NOVEL NA 113 113 1 ENSG00000236582.1 PRPF38AP2 chr10 17577362 17578212 + processed_pseudogene KNOWN OTTHUMG00000017752.1 851 851 1 ENSG00000165996.12 PTPLA chr10 17589032 17617377 - protein_coding KNOWN OTTHUMG00000017750.3 28346 3102 21 ENSG00000280126.2 AC069542.1 chr10 17602910 17603127 + pseudogene NOVEL NA 218 216 2 ENSG00000260589.1 STAM-AS1 chr10 17641284 17643878 - antisense NOVEL OTTHUMG00000176135.1 2595 2595 1 ENSG00000222511.2 Y_RNA chr1 8796571 8796673 - misc_RNA NOVEL NA 103 103 1 ENSG00000265241.5 RBM8A chr1 145921556 145927495 - protein_coding KNOWN OTTHUMG00000013736.6 5940 5241 18 ENSG00000136738.13 STAM chr10 17644125 17715914 + protein_coding KNOWN OTTHUMG00000017749.2 71790 3246 32 ENSG00000229190.1 RP11-390B4.3 chr10 17695709 17700232 - antisense NOVEL OTTHUMG00000017751.1 4524 557 3 ENSG00000148483.8 TMEM236 chr10 17752252 17800868 + protein_coding KNOWN OTTHUMG00000017753.1 48617 5464 4 ENSG00000260314.2 MRC1 chr10 17809344 17911170 + protein_coding KNOWN OTTHUMG00000174646.3 101827 5198 30 ENSG00000281531.1 Metazoa_SRP chr10 17832409 17832705 + misc_RNA NOVEL NA 297 297 1 ENSG00000207938.1 MIR511 chr10 17845107 17845193 + miRNA KNOWN NA 87 87 1 ENSG00000235637.1 RP11-457D2.3 chr10 17862887 17865471 - antisense NOVEL OTTHUMG00000017756.1 2585 221 2 ENSG00000148482.10 SLC39A12 chr10 17951839 18043292 + protein_coding KNOWN OTTHUMG00000017759.1 91454 2808 50 ENSG00000226083.4 SLC39A12-AS1 chr10 18001786 18010562 - antisense NOVEL OTTHUMG00000017758.1 8777 2581 9 ENSG00000165995.17 CACNB2 chr10 18140677 18541869 + protein_coding KNOWN OTTHUMG00000017764.2 401193 6537 157 ENSG00000234222.5 RP11-315I20.1 chr1 145926590 145959179 + antisense NOVEL OTTHUMG00000042245.4 32590 3248 59 ENSG00000235020.3 RP11-109I13.2 chr10 18206127 18261194 - processed_transcript NOVEL OTTHUMG00000017760.3 55068 2472 12 ENSG00000240291.1 RP11-499P20.2 chr10 18513115 18545651 - antisense NOVEL OTTHUMG00000017762.1 32537 1575 7 ENSG00000225527.1 RP11-383B4.4 chr10 18531849 18533336 - antisense NOVEL OTTHUMG00000017761.1 1488 413 2 ENSG00000241058.2 NSUN6 chr10 18545561 18659285 - protein_coding KNOWN OTTHUMG00000017767.2 113725 3498 32 ENSG00000165997.4 ARL5B chr10 18659405 18681639 + protein_coding KNOWN OTTHUMG00000017765.1 22235 7196 6 ENSG00000225509.1 AIFM1P1 chr10 18735745 18738631 + processed_pseudogene KNOWN OTTHUMG00000017768.1 2887 1841 2 ENSG00000234244.1 RP11-139J15.5 chr10 18746433 18747853 + lincRNA NOVEL OTTHUMG00000017769.1 1421 548 2 ENSG00000234813.1 RP11-288D15.1 chr10 18940501 18940953 + processed_pseudogene KNOWN OTTHUMG00000017770.1 453 453 1 ENSG00000204740.8 MALRD1 chr10 19048771 19790401 + protein_coding KNOWN OTTHUMG00000017779.4 741631 7781 92 ENSG00000226255.1 UBE2V2P1 chr10 19051455 19052170 + processed_pseudogene KNOWN OTTHUMG00000017771.1 716 398 2 ENSG00000280778.1 CH17-270A2.2 chr1 145927258 145977811 + protein_coding NOVEL OTTHUMG00000189699.1 50554 1095 10 ENSG00000227734.1 RP11-49L2.1 chr10 19290223 19291480 - antisense NOVEL OTTHUMG00000017772.1 1258 303 2 ENSG00000239539.1 HMGN1P20 chr10 19489101 19489400 + processed_pseudogene KNOWN OTTHUMG00000017774.1 300 300 1 ENSG00000236960.1 RP11-265G8.3 chr10 19491072 19491299 - processed_pseudogene KNOWN OTTHUMG00000017776.1 228 228 1 ENSG00000200545.2 U3 chr10 19598247 19598463 + snoRNA NOVEL NA 217 217 1 ENSG00000252001.1 RNA5SP303 chr10 19633683 19633812 - rRNA KNOWN NA 130 130 1 ENSG00000233968.5 RP11-354E11.2 chr10 19710328 19728550 - antisense NOVEL OTTHUMG00000017777.2 18223 2151 13 ENSG00000230818.1 MTND2P16 chr10 19747823 19748621 + processed_pseudogene KNOWN OTTHUMG00000017778.1 799 799 1 ENSG00000212072.1 AL353147.1 chr10 19783557 19783660 - miRNA NOVEL NA 104 104 1 ENSG00000252832.1 RNU6-1212P chr10 19792998 19793101 - snRNA KNOWN NA 104 104 1 ENSG00000120594.15 PLXDC2 chr10 19816239 20289856 + protein_coding KNOWN OTTHUMG00000017781.5 473618 12567 40 ENSG00000271601.3 LIX1L chr1 145933423 145958001 - protein_coding KNOWN OTTHUMG00000013741.3 24579 3975 6 ENSG00000238246.1 RP11-575A19.2 chr10 20070805 20091784 - antisense NOVEL OTTHUMG00000017780.1 20980 499 2 ENSG00000228339.1 AMD1P1 chr10 20350049 20351100 + processed_pseudogene KNOWN OTTHUMG00000017782.1 1052 922 2 ENSG00000270727.1 RP11-51E20.1 chr10 20547171 20547422 + processed_pseudogene KNOWN OTTHUMG00000184671.1 252 252 1 ENSG00000265372.1 MIR4675 chr10 20551970 20552046 + miRNA KNOWN NA 77 77 1 ENSG00000078114.17 NEBL chr10 20779973 21174187 - protein_coding KNOWN OTTHUMG00000017788.4 394215 13654 84 ENSG00000235940.1 MTND1P21 chr10 20804293 20804577 + processed_pseudogene KNOWN OTTHUMG00000017784.1 285 285 1 ENSG00000230112.1 RP11-56H7.2 chr10 20841375 20841560 + processed_pseudogene KNOWN OTTHUMG00000017783.1 186 186 1 ENSG00000228753.1 EIF4BP2 chr10 21028999 21030792 + processed_pseudogene KNOWN OTTHUMG00000017785.1 1794 1794 1 ENSG00000228219.1 NPM1P30 chr10 21110682 21113388 + processed_pseudogene KNOWN OTTHUMG00000017787.1 2707 828 2 ENSG00000204683.9 C10orf113 chr10 21125763 21146559 - protein_coding KNOWN OTTHUMG00000017786.5 20797 614 4 ENSG00000272031.2 ANKRD34A chr1 145959442 145964582 - protein_coding KNOWN OTTHUMG00000013740.3 5141 3677 9 ENSG00000231920.1 NEBL-AS1 chr10 21174014 21175048 + antisense NOVEL OTTHUMG00000017789.1 1035 681 4 ENSG00000228860.1 RP11-565H13.3 chr10 21217891 21218279 + processed_pseudogene KNOWN OTTHUMG00000017790.1 389 389 1 ENSG00000232853.1 LUZP4P1 chr10 21247752 21248095 + processed_pseudogene KNOWN OTTHUMG00000017791.1 344 344 1 ENSG00000207264.1 RNU6-15P chr10 21321961 21322067 + snRNA KNOWN NA 107 107 1 ENSG00000230109.1 RP11-275N1.1 chr10 21340233 21372950 - lincRNA NOVEL OTTHUMG00000017792.1 32718 439 5 ENSG00000231553.1 RNMTL1P1 chr10 21394033 21394592 + processed_pseudogene KNOWN OTTHUMG00000017793.1 560 560 1 ENSG00000278650.1 RP11-275N1.3 chr10 21452197 21452412 + unprocessed_pseudogene KNOWN OTTHUMG00000187770.1 216 216 1 ENSG00000273566.1 Metazoa_SRP chr10 21455236 21455515 - misc_RNA NOVEL NA 280 280 1 ENSG00000199222.1 Y_RNA chr10 21481716 21481817 + misc_RNA NOVEL NA 102 102 1 ENSG00000204682.5 CASC10 chr10 21492658 21497262 - protein_coding KNOWN OTTHUMG00000017795.2 4605 3801 2 ENSG00000278431.1 CH17-270A2.1 chr1 145961388 145964422 + antisense NOVEL OTTHUMG00000188590.1 3035 234 2 ENSG00000222071.1 MIR1915 chr10 21496562 21496641 - miRNA KNOWN NA 80 80 1 ENSG00000180592.15 SKIDA1 chr10 21513478 21525682 - protein_coding KNOWN OTTHUMG00000017797.3 12205 6622 9 ENSG00000078403.15 MLLT10 chr10 21534165 21743630 + protein_coding KNOWN OTTHUMG00000017799.1 209466 6844 127 ENSG00000207347.1 RNU6-306P chr10 21564471 21564577 - snRNA KNOWN NA 107 107 1 ENSG00000223984.1 HNRNPRP1 chr10 21624592 21626286 - processed_pseudogene KNOWN OTTHUMG00000017798.1 1695 1695 1 ENSG00000201390.1 RNU6-1141P chr10 21661635 21661741 - snRNA KNOWN NA 107 107 1 ENSG00000136770.9 DNAJC1 chr10 21756537 22003769 - protein_coding KNOWN OTTHUMG00000017800.4 247233 2501 27 ENSG00000252634.1 RN7SKP219 chr10 21785292 21785587 + misc_RNA KNOWN NA 296 296 1 ENSG00000279623.1 RP11-399C16.3 chr10 21865335 21865921 - sense_intronic NOVEL OTTHUMG00000189129.1 587 587 1 ENSG00000201364.1 RN7SKP37 chr10 21933143 21933438 + misc_RNA KNOWN NA 296 296 1 ENSG00000121851.11 POLR3GL chr1 145964702 145978848 + protein_coding KNOWN OTTHUMG00000013739.3 14147 1799 23 ENSG00000232497.1 ADIPOR1P1 chr10 22162992 22165794 + processed_pseudogene KNOWN OTTHUMG00000017804.1 2803 1074 3 ENSG00000236777.1 RP11-108B14.1 chr10 22163092 22164306 + processed_pseudogene KNOWN OTTHUMG00000017803.1 1215 473 2 ENSG00000223601.2 EBLN1 chr10 22208814 22210021 - protein_coding KNOWN OTTHUMG00000017801.3 1208 1208 1 ENSG00000260205.1 RP11-108B14.5 chr10 22218074 22221168 + lincRNA NOVEL OTTHUMG00000176138.1 3095 3095 1 ENSG00000227462.1 RP11-108B14.4 chr10 22225698 22226024 + processed_pseudogene KNOWN OTTHUMG00000017802.1 327 327 1 ENSG00000279631.1 RP11-573G6.4 chr10 22252072 22254589 + TEC KNOWN OTTHUMG00000176140.1 2518 2518 1 ENSG00000261671.1 RP11-573G6.6 chr10 22257786 22258548 + lincRNA NOVEL OTTHUMG00000176141.1 763 763 1 ENSG00000233318.2 RP11-573G6.2 chr10 22266991 22267346 + processed_pseudogene KNOWN OTTHUMG00000017805.2 356 356 1 ENSG00000148444.14 COMMD3 chr10 22315974 22320308 + protein_coding KNOWN OTTHUMG00000017806.3 4335 3317 80 ENSG00000269897.4 COMMD3-BMI1 chr10 22316388 22329542 + protein_coding KNOWN OTTHUMG00000184031.1 13155 1904 43 ENSG00000265972.4 TXNIP chr1 145992435 145996600 - protein_coding KNOWN OTTHUMG00000013755.6 4166 3625 20 ENSG00000168283.12 BMI1 chr10 22321211 22331484 + protein_coding KNOWN OTTHUMG00000017807.2 10274 4283 51 ENSG00000272516.1 RP11-573G6.9 chr10 22332404 22332987 + lincRNA NOVEL OTTHUMG00000185317.1 584 584 1 ENSG00000271981.1 RP11-573G6.8 chr10 22332587 22332981 - lincRNA NOVEL OTTHUMG00000185318.1 395 395 1 ENSG00000272366.1 RP11-573G6.10 chr10 22340377 22340615 - lincRNA NOVEL OTTHUMG00000185319.1 239 239 1 ENSG00000077327.14 SPAG6 chr10 22345445 22454224 + protein_coding KNOWN OTTHUMG00000017808.2 108780 3887 63 ENSG00000233451.1 RP11-301N24.3 chr10 22361172 22413067 + sense_overlapping NOVEL OTTHUMG00000017809.1 51896 469 2 ENSG00000150867.12 PIP4K2A chr10 22534849 22714555 - protein_coding KNOWN OTTHUMG00000017810.3 179707 5088 48 ENSG00000279819.1 RP11-142L16.2 chr10 22693953 22694639 - TEC KNOWN OTTHUMG00000184235.1 687 687 1 ENSG00000206842.1 RNU6-413P chr10 22787393 22787499 + snRNA KNOWN NA 107 107 1 ENSG00000165309.12 ARMC3 chr10 22928024 23038523 + protein_coding KNOWN OTTHUMG00000017811.3 110500 6999 118 ENSG00000168509.16 HFE2 chr1 146017468 146021918 - protein_coding KNOWN OTTHUMG00000013748.3 4451 2329 15 ENSG00000223131.1 RNA5SP304 chr10 22997255 22997358 + rRNA KNOWN NA 104 104 1 ENSG00000221221.1 AL139815.1 chr10 23074383 23074478 - miRNA NOVEL NA 96 96 1 ENSG00000148450.11 MSRB2 chr10 23095506 23122013 + protein_coding KNOWN OTTHUMG00000017812.3 26508 2052 12 ENSG00000229932.3 YWHAZP3 chr10 23136924 23137661 + processed_pseudogene KNOWN OTTHUMG00000017813.2 738 738 1 ENSG00000252049.1 SNORA40 chr10 23166985 23167101 + snoRNA NOVEL NA 117 117 1 ENSG00000168267.5 PTF1A chr10 23192327 23194252 + protein_coding KNOWN OTTHUMG00000017815.1 1926 1537 2 ENSG00000204566.6 LINC01552 chr10 23203816 23239816 - lincRNA KNOWN OTTHUMG00000017814.2 36001 664 4 ENSG00000227537.1 RP11-215C7.3 chr10 23258211 23258545 + processed_pseudogene KNOWN OTTHUMG00000017816.1 335 335 1 ENSG00000179133.10 C10orf67 chr10 23267195 23344845 - protein_coding KNOWN OTTHUMG00000017818.1 77651 3347 14 ENSG00000224215.1 RP11-371A19.2 chr10 23343957 23345181 + antisense NOVEL OTTHUMG00000017817.1 1225 892 2 ENSG00000201558.1 RNVU1-6 chr1 146052081 146052244 - snRNA KNOWN NA 164 164 1 ENSG00000264574.1 MIR1254-2 chr10 23393405 23393467 + miRNA KNOWN NA 63 63 1 ENSG00000165312.6 OTUD1 chr10 23439458 23442390 + protein_coding KNOWN OTTHUMG00000017819.1 2933 2933 1 ENSG00000120549.14 KIAA1217 chr10 23694746 24547848 + protein_coding KNOWN OTTHUMG00000017824.3 853103 10392 181 ENSG00000276037.1 AL355977.1 chr10 23718087 23718188 + miRNA NOVEL NA 102 102 1 ENSG00000223928.1 RP11-183E9.2 chr10 24157835 24158781 + processed_pseudogene KNOWN OTTHUMG00000017820.1 947 947 1 ENSG00000277563.1 PRINS chr10 24255246 24255333 + misc_RNA NOVEL NA 88 88 1 ENSG00000207930.1 MIR603 chr10 24275685 24275781 + miRNA KNOWN NA 97 97 1 ENSG00000279029.1 RP11-144I2.1 chr10 24481180 24483034 - TEC KNOWN OTTHUMG00000187415.1 1855 1855 1 ENSG00000107863.15 ARHGAP21 chr10 24583609 24723668 - protein_coding KNOWN OTTHUMG00000017825.4 140060 10473 159 ENSG00000199535.1 RNA5SP305 chr10 24640166 24640284 + rRNA KNOWN NA 119 119 1 ENSG00000226545.1 RP4-633I8.3 chr1 8798475 8799506 + unprocessed_pseudogene KNOWN OTTHUMG00000001776.2 1032 415 2 ENSG00000233396.6 RP11-458D21.1 chr1 146052566 146061948 + lincRNA NOVEL OTTHUMG00000042244.5 9383 2458 19 ENSG00000099256.17 PRTFDC1 chr10 24848607 24952604 - protein_coding KNOWN OTTHUMG00000017829.2 103998 2329 21 ENSG00000228667.1 RP11-129O7.2 chr10 24867645 24868190 + processed_pseudogene KNOWN OTTHUMG00000017826.1 546 268 2 ENSG00000240294.2 RN7SKP241 chr10 24908522 24908812 - misc_RNA KNOWN NA 291 291 1 ENSG00000273107.1 RP11-165A20.3 chr10 24953241 24953513 + lincRNA NOVEL OTTHUMG00000186186.1 273 273 1 ENSG00000151023.15 ENKUR chr10 24981979 25062279 - protein_coding KNOWN OTTHUMG00000017827.6 80301 4076 28 ENSG00000185875.11 THNSL1 chr10 25016658 25026664 + protein_coding KNOWN OTTHUMG00000017828.2 10007 3788 6 ENSG00000266069.1 AL139821.1 chr10 25091456 25091554 - miRNA NOVEL NA 99 99 1 ENSG00000231422.2 LINC01516 chr10 25113058 25161236 + lincRNA NOVEL OTTHUMG00000017831.2 48179 2992 7 ENSG00000233642.1 GPR158-AS1 chr10 25158072 25176276 - antisense NOVEL OTTHUMG00000017830.1 18205 2433 2 ENSG00000151025.9 GPR158 chr10 25175062 25602226 + protein_coding KNOWN OTTHUMG00000017832.3 427165 7726 17 ENSG00000271425.5 NBPF10 chr1 146064699 146144942 - protein_coding KNOWN OTTHUMG00000013757.23 80244 13290 277 ENSG00000274242.1 RP11-20I6.1 chr10 25244061 25244854 - unprocessed_pseudogene KNOWN OTTHUMG00000187772.1 794 387 2 ENSG00000222543.1 RN7SKP220 chr10 25393557 25393844 - misc_RNA KNOWN NA 288 288 1 ENSG00000227465.1 GPN3P1 chr10 25647570 25648104 - processed_pseudogene KNOWN OTTHUMG00000017834.1 535 535 1 ENSG00000280809.1 LINC00836 chr10 25651712 25732935 + lincRNA KNOWN OTTHUMG00000189579.1 81224 3108 16 ENSG00000271563.1 HIRAP1 chr10 25691537 25692323 + processed_pseudogene KNOWN OTTHUMG00000184668.1 787 787 1 ENSG00000223019.1 RNA5SP306 chr10 25813811 25813917 - rRNA KNOWN NA 107 107 1 ENSG00000251711.1 RNU6-632P chr10 25819363 25819426 - snRNA KNOWN NA 64 64 1 ENSG00000226304.1 RP11-435M3.2 chr10 25924448 25933710 - antisense NOVEL OTTHUMG00000017835.1 9263 481 4 ENSG00000095777.13 MYO3A chr10 25934267 26212527 + protein_coding KNOWN OTTHUMG00000017837.1 278261 8188 69 ENSG00000273952.1 AL360217.1 chr10 26159494 26159545 - miRNA NOVEL NA 52 52 1 ENSG00000213240.8 NOTCH2NL chr1 146113652 146229000 - protein_coding KNOWN OTTHUMG00000167702.20 115349 3411 21 ENSG00000136750.10 GAD2 chr10 26216307 26304558 + protein_coding KNOWN OTTHUMG00000017836.1 88252 6144 41 ENSG00000077420.14 APBB1IP chr10 26438203 26567803 + protein_coding KNOWN OTTHUMG00000017841.4 129601 3981 22 ENSG00000199733.1 RNA5SP307 chr10 26509589 26509704 + rRNA KNOWN NA 116 116 1 ENSG00000236894.2 RP11-128B16.3 chr10 26577676 26579095 - lincRNA NOVEL OTTHUMG00000017840.1 1420 432 2 ENSG00000233261.2 LINC00264 chr10 26589865 26594330 + lincRNA KNOWN OTTHUMG00000017839.2 4466 1091 4 ENSG00000234296.1 RP13-16H11.7 chr10 26643228 26645016 + lincRNA NOVEL OTTHUMG00000017847.1 1789 472 2 ENSG00000231976.6 LINC00202-2 chr10 26647986 26653454 + lincRNA NOVEL OTTHUMG00000017842.1 5469 1287 15 ENSG00000227932.1 RP13-16H11.2 chr10 26664206 26676159 - lincRNA NOVEL OTTHUMG00000017843.1 11954 319 3 ENSG00000279212.1 RP13-16H11.8 chr10 26695091 26697625 - TEC KNOWN OTTHUMG00000176144.1 2535 2535 1 ENSG00000148459.14 PDSS1 chr10 26697659 26746798 + protein_coding KNOWN OTTHUMG00000017844.3 49140 1955 30 ENSG00000264343.4 NOTCH2NL chr1 146146203 146229026 - protein_coding KNOWN OTTHUMG00000013754.5 82824 6443 20 ENSG00000234788.1 HSPA8P3 chr10 26714622 26715832 + processed_pseudogene KNOWN OTTHUMG00000017846.1 1211 780 3 ENSG00000235843.1 RP13-16H11.5 chr10 26717635 26718778 + antisense NOVEL OTTHUMG00000017845.1 1144 485 2 ENSG00000136754.15 ABI1 chr10 26746593 26861087 - protein_coding KNOWN OTTHUMG00000017848.1 114495 4218 123 ENSG00000223027.1 SNORA57 chr10 26789017 26789157 + snoRNA NOVEL NA 141 141 1 ENSG00000206605.1 RNU6-946P chr10 26790540 26790646 - snRNA KNOWN NA 107 107 1 ENSG00000232224.4 LINC00202-1 chr10 26931206 26942001 - lincRNA KNOWN OTTHUMG00000017849.1 10796 4900 11 ENSG00000236983.1 LINC00614 chr10 26943323 26944418 - lincRNA KNOWN OTTHUMG00000017850.1 1096 645 2 ENSG00000107890.15 ANKRD26 chr10 26991914 27100498 - protein_coding KNOWN OTTHUMG00000017851.1 108585 7941 86 ENSG00000199855.1 RNU6-490P chr10 27088321 27088427 - snRNA KNOWN NA 107 107 1 ENSG00000136758.17 YME1L1 chr10 27110112 27155266 - protein_coding KNOWN OTTHUMG00000017853.2 45155 7335 110 ENSG00000276509.1 CH17-353B19.1 chr1 146235806 146237807 + lincRNA NOVEL OTTHUMG00000188942.1 2002 2002 1 ENSG00000120539.13 MASTL chr10 27154824 27186924 + protein_coding KNOWN OTTHUMG00000017855.3 32101 3631 38 ENSG00000252639.1 RNU2-24P chr10 27193358 27193500 - snRNA KNOWN NA 143 143 1 ENSG00000107897.17 ACBD5 chr10 27195214 27242130 - protein_coding KNOWN OTTHUMG00000017854.4 46917 4371 91 ENSG00000251839.1 RNU7-12P chr10 27232255 27232316 - snRNA KNOWN NA 62 62 1 ENSG00000263577.1 AL160291.1 chr10 27235917 27236000 - miRNA NOVEL NA 84 84 1 ENSG00000262412.1 RP11-85G18.6 chr10 27243130 27250804 + lincRNA NOVEL OTTHUMG00000177437.1 7675 1002 2 ENSG00000230445.4 LRRC37A6P chr10 27246350 27259455 - transcribed_processed_pseudogene KNOWN OTTHUMG00000017852.2 13106 5625 8 ENSG00000238021.5 ARMC4P1 chr10 27258762 27288824 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000017856.2 30063 853 8 ENSG00000278830.1 RP11-748L13.7 chr10 27313723 27316587 + unprocessed_pseudogene KNOWN OTTHUMG00000187774.1 2865 292 2 ENSG00000200369.1 RNU6-666P chr10 27315120 27315226 + snRNA KNOWN NA 107 107 1 ENSG00000201789.1 RNU6-1071P chr1 146288596 146288696 + snRNA KNOWN NA 101 101 1 ENSG00000215409.4 RP11-748L13.2 chr10 27331357 27341252 - unprocessed_pseudogene KNOWN OTTHUMG00000017857.1 9896 808 6 ENSG00000207135.1 RNU6-452P chr10 27335501 27335607 - snRNA KNOWN NA 107 107 1 ENSG00000260151.1 RP11-748L13.6 chr10 27343436 27344917 + lincRNA NOVEL OTTHUMG00000176148.1 1482 1395 2 ENSG00000213770.3 FAM210CP chr10 27349717 27350290 - processed_pseudogene KNOWN OTTHUMG00000017858.1 574 574 1 ENSG00000237956.1 TRIAP1P1 chr10 27378138 27378362 - processed_pseudogene KNOWN OTTHUMG00000017859.1 225 225 1 ENSG00000182077.9 PTCHD3 chr10 27398187 27414368 - protein_coding KNOWN OTTHUMG00000017860.3 16182 2529 9 ENSG00000099246.15 RAB18 chr10 27504174 27542237 + protein_coding KNOWN OTTHUMG00000017861.4 38064 6223 51 ENSG00000150051.12 MKX chr10 27672875 27746060 - protein_coding KNOWN OTTHUMG00000017862.3 73186 4106 21 ENSG00000230500.1 MKX-AS1 chr10 27744786 27767794 + antisense NOVEL OTTHUMG00000017863.1 23009 909 5 ENSG00000251810.1 RN7SKP132 chr10 27783846 27784053 - misc_RNA KNOWN NA 208 208 1 ENSG00000271121.2 NUDT4P2 chr1 146298170 146298715 + processed_pseudogene KNOWN OTTHUMG00000188666.1 546 546 1 ENSG00000169126.14 ARMC4 chr10 27812164 27999048 - protein_coding KNOWN OTTHUMG00000017867.2 186885 4773 43 ENSG00000226016.1 RPL36AP55 chr10 27904209 27905162 + processed_pseudogene KNOWN OTTHUMG00000017864.1 954 305 2 ENSG00000233472.1 RP11-218D6.4 chr10 27999788 28049615 + lincRNA NOVEL OTTHUMG00000017866.2 49828 469 4 ENSG00000226395.1 RP11-218D6.3 chr10 28004702 28004932 + processed_pseudogene KNOWN OTTHUMG00000017865.1 231 231 1 ENSG00000150054.17 MPP7 chr10 28050993 28334486 - protein_coding KNOWN OTTHUMG00000017868.3 283494 6167 99 ENSG00000275036.1 MIR8086 chr10 28289258 28289350 - miRNA KNOWN NA 93 93 1 ENSG00000222374.1 AC022021.1 chr10 28310853 28310959 + miRNA NOVEL NA 107 107 1 ENSG00000237746.1 ZNF101P1 chr10 28338554 28340942 - processed_pseudogene KNOWN OTTHUMG00000017869.1 2389 1720 3 ENSG00000222666.2 U3 chr10 28408039 28408251 - snoRNA NOVEL NA 213 213 1 ENSG00000237128.1 RP11-351M16.3 chr10 28433008 28495813 - lincRNA NOVEL OTTHUMG00000017871.1 62806 273 3 ENSG00000277406.1 CH17-385C13.2 chr1 146321842 146328211 - unprocessed_pseudogene KNOWN OTTHUMG00000188667.1 6370 463 3 ENSG00000224439.2 RP11-351M16.1 chr10 28436201 28437078 + processed_pseudogene KNOWN OTTHUMG00000017870.1 878 878 1 ENSG00000222705.1 RN7SKP39 chr10 28442575 28442896 - misc_RNA KNOWN NA 322 322 1 ENSG00000254635.4 WAC-AS1 chr10 28522652 28532743 - antisense NOVEL OTTHUMG00000166235.1 10092 2943 6 ENSG00000095787.20 WAC chr10 28532493 28623112 + protein_coding KNOWN OTTHUMG00000017872.7 90620 12188 155 ENSG00000252401.1 RNU4ATAC6P chr10 28652630 28652755 + snRNA KNOWN NA 126 126 1 ENSG00000231911.1 TPRKBP1 chr10 28658987 28659467 + processed_pseudogene KNOWN OTTHUMG00000017873.1 481 481 1 ENSG00000207483.1 RNU6-1067P chr10 28667919 28668025 + snRNA KNOWN NA 107 107 1 ENSG00000095739.10 BAMBI chr10 28677342 28682939 + protein_coding KNOWN OTTHUMG00000017874.2 5598 2314 5 ENSG00000236716.1 RP11-478H13.1 chr10 28743745 28744663 + lincRNA NOVEL OTTHUMG00000017875.1 919 517 2 ENSG00000201001.1 RNU6-270P chr10 28760699 28760803 - snRNA KNOWN NA 105 105 1 ENSG00000270339.2 PPIAL4C chr1 146344006 146344790 - protein_coding KNOWN NA 785 785 1 ENSG00000235824.4 LINC00837 chr10 28789188 28796113 - lincRNA NOVEL OTTHUMG00000017876.4 6926 4860 9 ENSG00000232624.5 LINC01517 chr10 28792668 28808219 + processed_transcript NOVEL OTTHUMG00000017877.3 15552 1850 19 ENSG00000271220.1 RP11-478H13.4 chr10 28806121 28813458 + transcribed_processed_pseudogene KNOWN OTTHUMG00000184667.1 7338 367 4 ENSG00000204365.4 C10orf126 chr10 28846408 28881898 + protein_coding KNOWN OTTHUMG00000017878.1 35491 2149 9 ENSG00000199402.1 RNA5SP308 chr10 28874393 28874507 - rRNA KNOWN NA 115 115 1 ENSG00000229605.5 RP11-492M23.2 chr10 28898996 28899484 - processed_pseudogene KNOWN OTTHUMG00000017879.1 489 489 1 ENSG00000120563.7 LYZL1 chr10 29289061 29318328 + protein_coding KNOWN OTTHUMG00000017880.3 29268 1132 10 ENSG00000224597.8 SVIL-AS1 chr10 29409402 29487745 + antisense NOVEL OTTHUMG00000017881.5 78344 4995 39 ENSG00000274985.1 PTCHD3P1 chr10 29421476 29422012 - unprocessed_pseudogene KNOWN OTTHUMG00000187781.1 537 537 1 ENSG00000197321.13 SVIL chr10 29457338 29736781 - protein_coding KNOWN OTTHUMG00000017882.2 279444 9937 140 ENSG00000273768.1 RNU1-1 chr1 146376807 146376970 + snRNA NOVEL NA 164 164 1 ENSG00000207612.1 MIR604 chr10 29545004 29545097 - miRNA KNOWN NA 94 94 1 ENSG00000212411.1 SNORD115 chr10 29575306 29575381 + snoRNA NOVEL NA 76 76 1 ENSG00000216035.1 MIR938 chr10 29602264 29602346 - miRNA KNOWN NA 83 83 1 ENSG00000225976.5 RP11-192N10.2 chr10 29697935 29698174 + processed_pseudogene KNOWN OTTHUMG00000017883.1 240 240 1 ENSG00000222092.1 RNU6-908P chr10 29711915 29712008 + snRNA KNOWN NA 94 94 1 ENSG00000237936.1 RP11-224P11.1 chr10 29891032 29891467 - processed_pseudogene KNOWN OTTHUMG00000017884.1 436 436 1 ENSG00000165757.8 KIAA1462 chr10 30012800 30115494 - protein_coding KNOWN OTTHUMG00000017885.1 102695 9515 9 ENSG00000200887.1 RNU6-598P chr10 30299569 30299673 - snRNA KNOWN NA 105 105 1 ENSG00000230125.1 EEF1A1P39 chr10 30301823 30302072 - processed_pseudogene KNOWN OTTHUMG00000017887.1 250 250 1 ENSG00000259994.1 RP11-305E6.4 chr10 30302826 30306066 - sense_overlapping NOVEL OTTHUMG00000176157.1 3241 3241 1 ENSG00000228423.2 RP4-633I8.4 chr1 8805860 8807051 - lincRNA NOVEL OTTHUMG00000001777.2 1192 353 2 ENSG00000277573.1 AC245407.1 chr1 146377104 146377184 - miRNA NOVEL NA 81 81 1 ENSG00000107951.11 MTPAP chr10 30309801 30374448 - protein_coding KNOWN OTTHUMG00000017895.2 64648 8382 44 ENSG00000250833.1 DNM1P17 chr10 30353706 30357365 + unprocessed_pseudogene KNOWN OTTHUMG00000017888.1 3660 426 3 ENSG00000241621.1 GOLGA2P6 chr10 30364410 30374386 - unprocessed_pseudogene KNOWN OTTHUMG00000017890.1 9977 2049 14 ENSG00000220997.1 AL161651.1 chr10 30365067 30365148 - miRNA NOVEL NA 82 82 1 ENSG00000239625.3 RN7SL241P chr10 30366064 30366299 - misc_RNA KNOWN NA 236 236 1 ENSG00000276347.1 MIR7162 chr10 30368597 30368665 - miRNA KNOWN NA 69 69 1 ENSG00000214434.2 NIFKP1 chr10 30380174 30381062 + processed_pseudogene KNOWN OTTHUMG00000017891.1 889 889 1 ENSG00000235679.1 RP11-449I17.9 chr10 30383400 30383622 + processed_pseudogene KNOWN OTTHUMG00000017894.1 223 223 1 ENSG00000224473.1 CCND3P1 chr10 30403197 30403776 - processed_pseudogene KNOWN OTTHUMG00000017892.1 580 580 1 ENSG00000107968.8 MAP3K8 chr10 30433937 30461833 + protein_coding KNOWN OTTHUMG00000017889.4 27897 3601 38 ENSG00000274428.1 U1 chr1 146409903 146410062 + snRNA NOVEL NA 160 160 1 ENSG00000213778.2 HNRNPA1P32 chr10 30517616 30518861 - processed_pseudogene KNOWN OTTHUMG00000017893.1 1246 963 2 ENSG00000228800.1 RP11-253D19.1 chr10 30553854 30554483 - lincRNA NOVEL OTTHUMG00000017896.1 630 541 2 ENSG00000239744.3 RN7SL63P chr10 30555601 30555904 - misc_RNA KNOWN NA 304 304 1 ENSG00000230298.1 RP11-253D19.2 chr10 30576699 30580182 + lincRNA NOVEL OTTHUMG00000017897.1 3484 378 2 ENSG00000151033.8 LYZL2 chr10 30611779 30629762 - protein_coding KNOWN OTTHUMG00000017898.2 17984 818 5 ENSG00000230998.1 RP11-14C22.3 chr10 30655489 30657535 + lincRNA NOVEL OTTHUMG00000017899.1 2047 486 3 ENSG00000234814.6 SVILP1 chr10 30671566 30717266 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000017900.2 45701 2723 22 ENSG00000230720.1 RP11-14C22.6 chr10 30723251 30723740 + lincRNA NOVEL OTTHUMG00000017902.1 490 408 2 ENSG00000183621.14 ZNF438 chr10 30820207 31031937 - protein_coding KNOWN OTTHUMG00000017904.4 211731 4267 68 ENSG00000272914.1 RP11-330O11.3 chr10 30831828 30833387 - sense_intronic NOVEL OTTHUMG00000186197.1 1560 1560 1 ENSG00000277655.1 RP11-640M9.4 chr1 146459449 146461859 + unprocessed_pseudogene KNOWN OTTHUMG00000187535.3 2411 451 2 ENSG00000237135.1 DDX10P1 chr10 30919012 30921235 - processed_pseudogene KNOWN OTTHUMG00000017903.1 2224 1933 2 ENSG00000263578.1 AL359546.1 chr10 31065951 31066047 - miRNA NOVEL NA 97 97 1 ENSG00000272381.1 RP11-192P3.4 chr10 31187883 31261910 + lincRNA NOVEL OTTHUMG00000185608.1 74028 2246 2 ENSG00000237036.4 ZEB1-AS1 chr10 31206278 31320447 - antisense KNOWN OTTHUMG00000017905.3 114170 3831 18 ENSG00000252479.1 RNA5SP309 chr10 31259599 31259704 + rRNA KNOWN NA 106 106 1 ENSG00000148516.20 ZEB1 chr10 31318495 31529814 + protein_coding KNOWN OTTHUMG00000017907.4 211320 8650 185 ENSG00000230397.1 SPTLC1P1 chr10 31360955 31361215 + transcribed_processed_pseudogene KNOWN OTTHUMG00000017906.1 261 261 1 ENSG00000223834.2 RP11-472N13.2 chr10 31604600 31606218 + lincRNA NOVEL OTTHUMG00000017909.1 1619 421 2 ENSG00000231855.1 GLUDP5 chr10 31628540 31628599 - unprocessed_pseudogene KNOWN OTTHUMG00000017908.1 60 60 1 ENSG00000223243.2 AL161935.1 chr10 31651354 31651450 - miRNA NOVEL NA 97 97 1 ENSG00000277420.1 CH17-408M7.1 chr1 146514471 146525289 + lincRNA NOVEL OTTHUMG00000188837.1 10819 2538 2 ENSG00000237797.1 RP11-472N13.3 chr10 31693084 31707388 - lincRNA NOVEL OTTHUMG00000017910.1 14305 347 2 ENSG00000222412.1 Y_RNA chr10 31756042 31756136 - misc_RNA NOVEL NA 95 95 1 ENSG00000165322.16 ARHGAP12 chr10 31805404 31928876 - protein_coding KNOWN OTTHUMG00000017911.1 123473 5938 122 ENSG00000231148.1 HMGB1P7 chr10 31913143 31913754 + processed_pseudogene KNOWN OTTHUMG00000017912.1 612 612 1 ENSG00000230240.1 RP11-241I20.1 chr10 31983885 31984554 + processed_pseudogene KNOWN OTTHUMG00000017914.1 670 342 2 ENSG00000239731.3 RN7SL825P chr10 31992087 31992381 - misc_RNA KNOWN NA 295 295 1 ENSG00000170759.10 KIF5B chr10 32009010 32056431 - protein_coding KNOWN OTTHUMG00000017913.1 47422 5877 31 ENSG00000206660.1 Y_RNA chr10 32056746 32056839 + misc_RNA NOVEL NA 94 94 1 ENSG00000234335.1 RPS4XP11 chr10 32102522 32103293 - processed_pseudogene KNOWN OTTHUMG00000017915.1 772 772 1 ENSG00000235113.1 RP11-241I20.4 chr10 32109861 32111666 + processed_pseudogene KNOWN OTTHUMG00000017916.1 1806 679 2 ENSG00000274408.1 5S_rRNA chr1 146539541 146539663 - rRNA NOVEL NA 123 123 1 ENSG00000234811.1 RP11-241I20.5 chr10 32111644 32111789 - processed_pseudogene KNOWN OTTHUMG00000017917.1 146 146 1 ENSG00000252482.1 RNU7-22P chr10 32173684 32173744 + snRNA KNOWN NA 61 61 1 ENSG00000217094.2 PPIAP31 chr10 32188323 32188817 - processed_pseudogene KNOWN OTTHUMG00000017919.1 495 495 1 ENSG00000233190.1 RPS24P13 chr10 32231849 32232245 - processed_pseudogene KNOWN OTTHUMG00000017920.1 397 397 1 ENSG00000227253.3 RP11-166N17.1 chr10 32266289 32269474 + antisense NOVEL OTTHUMG00000017921.3 3186 1109 6 ENSG00000120616.14 EPC1 chr10 32267751 32378798 - protein_coding KNOWN OTTHUMG00000017925.3 111048 11286 67 ENSG00000226842.1 RP11-166N17.3 chr10 32281686 32282829 + antisense NOVEL OTTHUMG00000017922.1 1144 466 2 ENSG00000233825.1 RP11-135A24.4 chr10 32346499 32347179 + antisense NOVEL OTTHUMG00000017924.1 681 383 2 ENSG00000222309.1 AL391839.1 chr10 32346864 32346946 - miRNA NOVEL NA 83 83 1 ENSG00000229327.1 RP11-135A24.2 chr10 32347397 32374488 + antisense NOVEL OTTHUMG00000017923.1 27092 265 2 ENSG00000276975.1 HYDIN2 chr1 146547367 146914294 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000158075.4 366928 14641 81 ENSG00000200484.1 RNU6-1244P chr10 32394558 32394665 - snRNA KNOWN NA 108 108 1 ENSG00000216937.10 CCDC7 chr10 32446140 32574564 + protein_coding KNOWN OTTHUMG00000150517.3 128425 5690 100 ENSG00000231245.2 C1DP1 chr10 32511336 32511737 - processed_pseudogene KNOWN OTTHUMG00000017927.1 402 402 1 ENSG00000279242.1 RP11-195O1.5 chr10 32543369 32583286 + processed_transcript NOVEL OTTHUMG00000189319.1 39918 610 6 ENSG00000150076.21 CCDC7 chr10 32567723 32882874 + protein_coding KNOWN OTTHUMG00000017926.5 315152 3302 106 ENSG00000273038.2 RP11-479G22.8 chr10 32887255 32889311 - lincRNA NOVEL OTTHUMG00000186205.2 2057 2057 1 ENSG00000150093.17 ITGB1 chr10 32900319 33005792 - protein_coding KNOWN OTTHUMG00000017928.8 105474 6011 120 ENSG00000228816.1 AK3P5 chr10 32944481 32944999 + processed_pseudogene KNOWN OTTHUMG00000017931.1 519 519 1 ENSG00000229656.5 RP11-462L8.1 chr10 32958845 33082102 + lincRNA NOVEL OTTHUMG00000017934.1 123258 1193 7 ENSG00000234163.1 RP11-479G22.6 chr10 33023368 33023647 - processed_pseudogene KNOWN OTTHUMG00000017932.1 280 280 1 ENSG00000221560.2 MIR1302-1 chr1 146842255 146842384 + miRNA KNOWN NA 130 130 1 ENSG00000265319.2 RN7SL847P chr10 33034655 33034924 - misc_RNA KNOWN NA 270 270 1 ENSG00000229878.1 RP11-479G22.7 chr10 33035469 33035664 - processed_pseudogene KNOWN OTTHUMG00000017933.1 196 196 1 ENSG00000235962.5 RP11-462L8.2 chr10 33057615 33058407 - processed_pseudogene KNOWN OTTHUMG00000017935.1 793 793 1 ENSG00000233387.1 RP11-342D11.3 chr10 33096257 33116672 - lincRNA NOVEL OTTHUMG00000017937.1 20416 552 2 ENSG00000263576.1 AL121748.1 chr10 33098535 33098636 - miRNA NOVEL NA 102 102 1 ENSG00000099250.16 NRP1 chr10 33177492 33336262 - protein_coding KNOWN OTTHUMG00000019343.5 158771 11522 137 ENSG00000238258.1 RP11-342D11.2 chr10 33211277 33213804 + antisense NOVEL OTTHUMG00000017936.1 2528 781 2 ENSG00000244356.3 RN7SL398P chr10 33288304 33288601 - misc_RNA KNOWN NA 298 298 1 ENSG00000273012.1 RP11-90B22.1 chr10 33341655 33341905 + lincRNA NOVEL OTTHUMG00000186206.1 251 251 1 ENSG00000226412.1 RP11-476F14.1 chr10 33578931 33600040 - lincRNA NOVEL OTTHUMG00000017939.1 21110 862 4 ENSG00000274450.1 U6atac chr1 146862729 146862845 - snRNA NOVEL NA 117 117 1 ENSG00000203565.2 RP13-259N13.2 chr10 33684755 33687064 + lincRNA NOVEL OTTHUMG00000017940.1 2310 452 2 ENSG00000261683.1 LINC00838 chr10 33759713 33772658 - lincRNA NOVEL OTTHUMG00000176162.1 12946 2936 3 ENSG00000226407.1 RPL23P11 chr10 33864313 33864723 + processed_pseudogene KNOWN OTTHUMG00000017941.1 411 411 1 ENSG00000223470.3 RP11-490O24.2 chr10 33909238 33917804 + lincRNA NOVEL OTTHUMG00000017942.3 8567 631 5 ENSG00000148498.14 PARD3 chr10 34109560 34815325 - protein_coding KNOWN OTTHUMG00000017948.1 705766 6513 277 ENSG00000199200.2 Y_RNA chr10 34201979 34202074 - misc_RNA NOVEL NA 96 96 1 ENSG00000234167.1 TCEB2P4 chr10 34488583 34488878 - processed_pseudogene KNOWN OTTHUMG00000017943.1 296 296 1 ENSG00000229235.1 RP11-8L18.3 chr10 34663859 34664101 - processed_pseudogene KNOWN OTTHUMG00000017945.1 243 243 1 ENSG00000215184.2 RP11-8L18.2 chr10 34675635 34676041 - processed_pseudogene KNOWN OTTHUMG00000017944.1 407 407 1 ENSG00000226386.1 PARD3-AS1 chr10 34815767 34816386 + antisense NOVEL OTTHUMG00000017947.1 620 302 2 ENSG00000268043.6 NBPF12 chr1 146938744 146996202 + protein_coding KNOWN OTTHUMG00000043708.7 57459 7272 194 ENSG00000232525.1 SS18L2P1 chr10 34875210 34875422 + processed_pseudogene KNOWN OTTHUMG00000017946.1 213 213 1 ENSG00000223047.1 RNU6-847P chr10 34926775 34926882 + snRNA KNOWN NA 108 108 1 ENSG00000222909.1 RNU6-193P chr10 34942969 34943075 + snRNA KNOWN NA 107 107 1 ENSG00000213724.3 PRDX2P2 chr10 34965069 34966259 + processed_pseudogene KNOWN OTTHUMG00000017949.1 1191 1191 1 ENSG00000108094.13 CUL2 chr10 35008551 35090642 - protein_coding KNOWN OTTHUMG00000017950.3 82092 5147 173 ENSG00000266228.1 MIR3611 chr10 35079598 35079680 - miRNA KNOWN NA 83 83 1 ENSG00000230534.5 RP11-297A16.2 chr10 35098006 35127020 - antisense NOVEL OTTHUMG00000017952.1 29015 1422 11 ENSG00000095794.18 CREM chr10 35126791 35212958 + protein_coding KNOWN OTTHUMG00000017953.28 86168 5699 228 ENSG00000253054.1 RNU7-77P chr10 35135443 35135502 + snRNA KNOWN NA 60 60 1 ENSG00000233343.1 ATP6V1G1P4 chr10 35158306 35158640 + processed_pseudogene KNOWN OTTHUMG00000017951.1 335 335 1 ENSG00000244371.2 PFN1P8 chr1 146957117 146957659 - processed_pseudogene KNOWN OTTHUMG00000158076.2 543 543 1 ENSG00000269952.1 RP11-324I22.3 chr10 35210416 35210750 + sense_intronic NOVEL OTTHUMG00000183936.1 335 335 1 ENSG00000233200.1 RP11-324I22.2 chr10 35219894 35230598 - lincRNA NOVEL OTTHUMG00000017954.1 10705 380 2 ENSG00000253070.1 RNU6-794P chr10 35231331 35231394 - snRNA KNOWN NA 64 64 1 ENSG00000108100.16 CCNY chr10 35247025 35572669 + protein_coding KNOWN OTTHUMG00000017955.3 325645 5743 81 ENSG00000200097.1 RNU6-1167P chr10 35250959 35251052 - snRNA KNOWN NA 94 94 1 ENSG00000271335.4 RP11-324I22.4 chr10 35314552 35336401 - antisense NOVEL OTTHUMG00000185120.1 21850 1412 7 ENSG00000177291.3 GJD4 chr10 35605410 35608935 + protein_coding KNOWN OTTHUMG00000017957.1 3526 1580 2 ENSG00000273312.1 RP11-425A6.5 chr10 35606001 35608153 - antisense NOVEL OTTHUMG00000186092.1 2153 2153 1 ENSG00000177283.5 FZD8 chr10 35638249 35642278 - protein_coding KNOWN OTTHUMG00000017956.2 4030 4030 1 ENSG00000264780.1 MIR4683 chr10 35641172 35641252 - miRNA KNOWN NA 81 81 1 ENSG00000229716.2 RP11-185B14.1 chr1 8831007 8831375 + processed_pseudogene KNOWN OTTHUMG00000001780.3 369 369 1 ENSG00000234225.2 RP4-704D21.2 chr1 147001931 147003618 - lincRNA NOVEL OTTHUMG00000043709.3 1688 884 6 ENSG00000226646.1 RPL7P37 chr10 35697300 35698037 + processed_pseudogene KNOWN OTTHUMG00000017958.1 738 738 1 ENSG00000280719.1 LINC01452 chr10 35778302 35800920 + lincRNA KNOWN OTTHUMG00000189575.1 22619 3550 3 ENSG00000227313.1 RP11-309N24.1 chr10 35896874 35898963 - lincRNA NOVEL OTTHUMG00000017959.1 2090 868 2 ENSG00000227475.1 RP11-810B23.1 chr10 36089086 36089389 - lincRNA NOVEL OTTHUMG00000017960.1 304 187 2 ENSG00000236626.1 MTND5P17 chr10 36432882 36434484 - processed_pseudogene KNOWN OTTHUMG00000017961.1 1603 1603 1 ENSG00000228694.1 MTND4P18 chr10 36434710 36435174 - processed_pseudogene KNOWN OTTHUMG00000017962.1 465 465 1 ENSG00000237002.5 RP11-92J19.3 chr10 36438616 36442392 + lincRNA NOVEL OTTHUMG00000017963.1 3777 665 5 ENSG00000274458.1 SNORA40 chr10 36438661 36438788 + snoRNA NOVEL NA 128 128 1 ENSG00000229644.6 NAMPTP1 chr10 36521721 36524234 - processed_pseudogene KNOWN OTTHUMG00000017964.1 2514 2514 1 ENSG00000207271.1 Y_RNA chr10 36626015 36626138 - misc_RNA NOVEL NA 124 124 1 ENSG00000227242.3 NBPF13P chr1 147021320 147124525 - unprocessed_pseudogene KNOWN OTTHUMG00000041474.3 103206 3808 28 ENSG00000238176.1 RP11-322I2.1 chr10 36940109 36943932 + lincRNA NOVEL OTTHUMG00000017965.1 3824 293 2 ENSG00000233533.1 MKNK2P1 chr10 36944111 36944738 - processed_pseudogene KNOWN OTTHUMG00000017966.1 628 628 1 ENSG00000225355.1 ARL6IP1P2 chr10 36995023 36995585 + processed_pseudogene KNOWN OTTHUMG00000017967.1 563 563 1 ENSG00000148513.16 ANKRD30A chr10 37125788 37384111 + protein_coding KNOWN OTTHUMG00000017968.5 258324 5015 158 ENSG00000206796.1 RNU6-811P chr10 37135237 37135343 + snRNA KNOWN NA 107 107 1 ENSG00000234918.1 RP11-20F24.2 chr10 37240887 37242049 + lincRNA NOVEL OTTHUMG00000017969.1 1163 335 3 ENSG00000240800.1 ATP8A2P1 chr10 37248118 37315801 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000017970.1 67684 540 6 ENSG00000244402.3 RN7SL314P chr10 37297398 37297689 + misc_RNA KNOWN NA 292 292 1 ENSG00000252621.1 Y_RNA chr10 37303000 37303109 - misc_RNA NOVEL NA 110 110 1 ENSG00000235687.7 LINC00993 chr10 37309185 37347031 + lincRNA NOVEL OTTHUMG00000017971.3 37847 741 14 ENSG00000225603.3 RP11-325P15.1 chr1 147050817 147052481 + processed_pseudogene KNOWN OTTHUMG00000041051.2 1665 1665 1 ENSG00000237970.1 TMEM161BP1 chr10 37337415 37338871 + processed_pseudogene KNOWN OTTHUMG00000017972.1 1457 1457 1 ENSG00000236313.1 VN1R53P chr10 37348616 37349572 + processed_pseudogene KNOWN OTTHUMG00000017973.1 957 957 1 ENSG00000224920.1 TACC1P1 chr10 37523011 37544701 + unprocessed_pseudogene KNOWN OTTHUMG00000017974.1 21691 1454 5 ENSG00000225276.1 MTND1P18 chr10 37600796 37601368 - processed_pseudogene KNOWN OTTHUMG00000017975.1 573 573 1 ENSG00000256892.2 MTRNR2L7 chr10 37601440 37602974 - protein_coding KNOWN OTTHUMG00000184979.1 1535 1535 1 ENSG00000226578.1 RP11-258F22.1 chr10 37775371 37784131 - lincRNA NOVEL OTTHUMG00000017976.1 8761 712 3 ENSG00000198105.10 ZNF248 chr10 37776526 37858106 - protein_coding KNOWN OTTHUMG00000017980.2 81581 7289 54 ENSG00000260137.1 RP11-258F22.2 chr10 37791580 37791937 + lincRNA NOVEL OTTHUMG00000176164.1 358 358 1 ENSG00000225192.1 ZNF33BP1 chr10 37794276 37796109 - processed_pseudogene KNOWN OTTHUMG00000017978.1 1834 1834 1 ENSG00000228828.1 RP11-162G10.1 chr10 37818606 37820982 - processed_pseudogene KNOWN OTTHUMG00000017977.1 2377 2240 2 ENSG00000201142.1 RNVU1-8 chr1 147079746 147079870 + snRNA KNOWN NA 125 125 1 ENSG00000266800.1 AL135791.1 chr10 37831889 37831971 + miRNA NOVEL NA 83 83 1 ENSG00000236514.1 RP11-162G10.5 chr10 37857740 37859110 + antisense NOVEL OTTHUMG00000017979.1 1371 826 2 ENSG00000151963.4 RP11-775A3.1 chr10 37883594 37884109 + unprocessed_pseudogene KNOWN OTTHUMG00000017981.1 516 241 2 ENSG00000235197.1 ZNF33AP1 chr10 37894637 37896666 + processed_pseudogene KNOWN OTTHUMG00000017982.1 2030 2030 1 ENSG00000175395.14 ZNF25 chr10 37949572 37976633 - protein_coding KNOWN OTTHUMG00000019344.3 27062 4244 20 ENSG00000226447.1 RP11-393J16.4 chr10 37976825 37992467 + lincRNA NOVEL OTTHUMG00000153548.2 15643 444 3 ENSG00000206840.1 Y_RNA chr10 37994863 37994975 + misc_RNA NOVEL NA 113 113 1 ENSG00000189180.14 ZNF33A chr10 38010650 38065088 + protein_coding KNOWN OTTHUMG00000017983.5 54439 7523 40 ENSG00000252132.1 RNU6-795P chr10 38043873 38043975 - snRNA KNOWN NA 103 103 1 ENSG00000275675.1 RP11-1021O19.2 chr10 38068449 38068694 - unprocessed_pseudogene KNOWN OTTHUMG00000187784.1 246 246 1 ENSG00000230832.3 RP11-325P15.2 chr1 147082338 147083578 - processed_pseudogene KNOWN OTTHUMG00000041048.2 1241 1241 1 ENSG00000226086.5 EIF3LP3 chr10 38080056 38080877 - processed_pseudogene KNOWN OTTHUMG00000017986.1 822 822 1 ENSG00000235964.1 FXYD6P2 chr10 38091764 38092051 - processed_pseudogene KNOWN OTTHUMG00000017988.1 288 288 1 ENSG00000075407.16 ZNF37A chr10 38094336 38125544 + protein_coding KNOWN OTTHUMG00000017990.2 31209 9626 28 ENSG00000272983.1 RP11-508N22.12 chr10 38137337 38144399 + lincRNA NOVEL OTTHUMG00000186215.1 7063 7063 1 ENSG00000273019.1 RP11-508N22.13 chr10 38149968 38150293 + lincRNA NOVEL OTTHUMG00000186234.1 326 326 1 ENSG00000225965.1 RP11-508N22.6 chr10 38161570 38161749 + processed_pseudogene KNOWN OTTHUMG00000017989.1 180 180 1 ENSG00000224761.3 RP11-508N22.9 chr10 38164648 38212357 + lincRNA NOVEL OTTHUMG00000017984.2 47710 1143 10 ENSG00000236309.1 RP11-508N22.10 chr10 38186670 38186771 + processed_pseudogene KNOWN OTTHUMG00000017985.1 102 102 1 ENSG00000226113.1 RP11-672F9.1 chr10 38247922 38333155 + lincRNA NOVEL OTTHUMG00000017992.1 85234 425 3 ENSG00000234941.1 RP11-508N22.11 chr10 38250442 38250603 - processed_pseudogene KNOWN OTTHUMG00000017987.1 162 162 1 ENSG00000131791.7 PRKAB2 chr1 147155106 147172550 - protein_coding KNOWN OTTHUMG00000014032.3 17445 5460 17 ENSG00000099251.13 HSD17B7P2 chr10 38356380 38378505 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000017993.2 22126 1506 17 ENSG00000120555.12 SEPT7P9 chr10 38383069 38402916 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000017994.4 19848 1204 10 ENSG00000222314.1 RNU6-1118P chr10 38423625 38423728 + snRNA KNOWN NA 104 104 1 ENSG00000263064.2 RP11-291L22.7 chr10 38448689 38448949 + processed_pseudogene KNOWN OTTHUMG00000187469.1 261 261 1 ENSG00000275858.1 RP11-291L22.8 chr10 38450738 38451069 - processed_pseudogene KNOWN OTTHUMG00000187788.1 332 332 1 ENSG00000276805.1 RP11-291L22.6 chr10 38451030 38451785 + processed_pseudogene KNOWN OTTHUMG00000187468.1 756 756 1 ENSG00000228882.1 CICP9 chr10 38452987 38455365 - processed_pseudogene KNOWN OTTHUMG00000017997.1 2379 1913 3 ENSG00000203496.7 RP11-291L22.4 chr10 38453181 38466176 + lincRNA NOVEL OTTHUMG00000017996.3 12996 727 7 ENSG00000215151.4 ABCD1P2 chr10 38601418 38605609 + unprocessed_pseudogene KNOWN OTTHUMG00000018003.2 4192 1601 4 ENSG00000277133.1 RP11-453N3.7 chr10 38617255 38617344 + processed_pseudogene KNOWN OTTHUMG00000187792.1 90 90 1 ENSG00000237188.3 RP11-337C18.8 chr1 147172771 147211568 + antisense NOVEL OTTHUMG00000042021.4 38798 3618 9 ENSG00000225638.1 PABPC1P12 chr10 38635908 38638082 + processed_pseudogene KNOWN OTTHUMG00000018002.1 2175 2175 1 ENSG00000233867.2 SLC9B1P3 chr10 38640971 38689068 - unprocessed_pseudogene KNOWN OTTHUMG00000018001.2 48098 1334 9 ENSG00000227264.3 ACTR3BP5 chr10 38696424 38697902 + processed_pseudogene KNOWN OTTHUMG00000018000.1 1479 1479 1 ENSG00000234541.2 CHEK2P5 chr10 38713195 38719229 + unprocessed_pseudogene KNOWN OTTHUMG00000017999.2 6035 246 3 ENSG00000227679.1 RP11-453N3.1 chr10 38762095 38762491 - processed_pseudogene KNOWN OTTHUMG00000017998.1 397 397 1 ENSG00000233832.1 RP11-96F8.1 chr10 38783004 38783108 + processed_pseudogene KNOWN OTTHUMG00000018004.1 105 105 1 ENSG00000229485.1 KSR1P1 chr10 42149310 42149549 - processed_pseudogene KNOWN OTTHUMG00000018006.1 240 240 1 ENSG00000237592.2 IGKV1OR10-1 chr10 42185339 42185791 + IG_V_pseudogene KNOWN OTTHUMG00000018005.2 453 329 2 ENSG00000271650.1 AL031601.4 chr10 42209990 42210383 + processed_pseudogene KNOWN OTTHUMG00000184666.1 394 394 1 ENSG00000274167.3 AL031601.5 chr10 42242721 42276842 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000187820.1 34122 563 5 ENSG00000273071.1 RP11-337C18.10 chr1 147173186 147252659 + processed_transcript NOVEL OTTHUMG00000185879.1 79474 573 3 ENSG00000228755.1 PABPC1P8 chr10 42279734 42281819 - processed_pseudogene KNOWN OTTHUMG00000018007.1 2086 2086 1 ENSG00000215146.4 RP11-313J2.1 chr10 42331866 42367974 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000018008.2 36109 7024 10 ENSG00000182632.13 CCNYL2 chr10 42408168 42475349 - translated_unprocessed_pseudogene KNOWN OTTHUMG00000018009.9 67182 3831 27 ENSG00000279239.1 RP11-178A10.3 chr10 42470082 42470268 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000189452.1 187 187 1 ENSG00000185904.10 LINC00839 chr10 42475543 42495336 + lincRNA NOVEL OTTHUMG00000018010.2 19794 2337 10 ENSG00000234420.6 ZNF37BP chr10 42513510 42552822 - transcribed_processed_pseudogene KNOWN OTTHUMG00000018011.4 39313 10256 20 ENSG00000270762.1 FXYD6P1 chr10 42555440 42555724 + processed_pseudogene KNOWN OTTHUMG00000184665.1 285 285 1 ENSG00000233837.1 EIF3LP2 chr10 42566677 42567483 + processed_pseudogene KNOWN OTTHUMG00000018013.1 807 807 1 ENSG00000196693.13 ZNF33B chr10 42574185 42638568 - protein_coding KNOWN OTTHUMG00000018014.2 64384 8307 30 ENSG00000277479.1 AL022345.10 chr10 42578500 42578727 + unprocessed_pseudogene KNOWN OTTHUMG00000187826.1 228 228 1 ENSG00000131781.11 FMO5 chr1 147175351 147243050 - protein_coding KNOWN OTTHUMG00000014607.3 67700 5986 59 ENSG00000272319.1 AL022345.7 chr10 42579724 42582772 + unprocessed_pseudogene KNOWN OTTHUMG00000185670.1 3049 183 2 ENSG00000272387.1 AL022345.8 chr10 42583235 42583387 + unprocessed_pseudogene KNOWN OTTHUMG00000185671.1 153 153 1 ENSG00000271831.1 AL022345.9 chr10 42583767 42583793 + unprocessed_pseudogene KNOWN OTTHUMG00000185672.1 27 27 1 ENSG00000251783.1 RNU6-1170P chr10 42605158 42605263 + snRNA KNOWN NA 106 106 1 ENSG00000232109.1 AL022344.2 chr10 42660728 42661776 + processed_pseudogene KNOWN OTTHUMG00000018015.1 1049 1049 1 ENSG00000233515.1 LINC01518 chr10 42674197 42691723 - lincRNA NOVEL OTTHUMG00000018017.1 17527 519 4 ENSG00000231009.1 CUBNP1 chr10 42694371 42714575 - unprocessed_pseudogene KNOWN OTTHUMG00000018016.1 20205 1790 10 ENSG00000234864.1 AL022344.5 chr10 42696035 42706453 + lincRNA NOVEL OTTHUMG00000018018.1 10419 3965 3 ENSG00000230425.1 RSU1P1 chr10 42725857 42737159 + unprocessed_pseudogene KNOWN OTTHUMG00000018019.1 11303 441 4 ENSG00000270552.1 DUXAP3 chr10 42747544 42748687 - unprocessed_pseudogene KNOWN OTTHUMG00000184626.2 1144 594 2 ENSG00000271721.1 RP11-337C18.9 chr1 147175602 147177740 + antisense NOVEL OTTHUMG00000185801.2 2139 2139 1 ENSG00000259869.1 AL022344.7 chr10 42751178 42752145 - lincRNA NOVEL OTTHUMG00000176167.1 968 968 1 ENSG00000165733.7 BMS1 chr10 42782801 42834937 + protein_coding KNOWN OTTHUMG00000018020.2 52137 7753 23 ENSG00000252416.1 RNU6-885P chr10 42832447 42832550 - snRNA KNOWN NA 104 104 1 ENSG00000234944.1 RP11-124O11.1 chr10 42871521 42874060 + lincRNA NOVEL OTTHUMG00000018021.1 2540 1714 2 ENSG00000229630.1 LINC01264 chr10 42979017 42981507 - lincRNA NOVEL OTTHUMG00000018022.1 2491 500 3 ENSG00000263795.1 MIR5100 chr10 42997563 42997681 + miRNA KNOWN NA 119 119 1 ENSG00000165731.16 RET chr10 43077027 43130351 + protein_coding KNOWN OTTHUMG00000018024.3 53325 6661 60 ENSG00000273008.1 RP11-351D16.3 chr10 43136824 43138334 - lincRNA NOVEL OTTHUMG00000186248.1 1511 1511 1 ENSG00000169826.7 CSGALNACT2 chr10 43138486 43185308 + protein_coding KNOWN OTTHUMG00000018023.1 46823 3730 8 ENSG00000198915.10 RASGEF1A chr10 43194535 43266919 - protein_coding KNOWN OTTHUMG00000018025.5 72385 6073 50 ENSG00000074800.12 ENO1 chr1 8861002 8879249 - protein_coding KNOWN OTTHUMG00000001773.3 18248 3958 37 ENSG00000180867.10 PDIA3P1 chr1 147178113 147179622 + processed_pseudogene KNOWN OTTHUMG00000041049.1 1510 1510 1 ENSG00000224265.1 RP11-168L22.2 chr10 43323665 43327932 + lincRNA NOVEL OTTHUMG00000018026.1 4268 391 3 ENSG00000221468.1 RNU6ATAC11P chr10 43341786 43341910 + snRNA KNOWN NA 125 125 1 ENSG00000150201.13 FXYD4 chr10 43371642 43376335 + protein_coding KNOWN OTTHUMG00000018027.4 4694 827 30 ENSG00000169813.15 HNRNPF chr10 43385617 43409166 - protein_coding KNOWN OTTHUMG00000018029.2 23550 3253 26 ENSG00000221400.2 U3 chr10 43417249 43417438 - snoRNA NOVEL NA 190 190 1 ENSG00000230555.2 RP11-517P14.2 chr10 43420738 43422100 + lincRNA NOVEL OTTHUMG00000018028.2 1363 760 2 ENSG00000243660.8 ZNF487 chr10 43436841 43483179 + protein_coding KNOWN OTTHUMG00000185507.1 46339 4976 16 ENSG00000252532.1 RNU7-193P chr10 43458065 43458129 + snRNA KNOWN NA 65 65 1 ENSG00000236114.1 RP11-517P14.7 chr10 43523256 43525217 + unprocessed_pseudogene KNOWN OTTHUMG00000018032.1 1962 1962 1 ENSG00000196793.12 ZNF239 chr10 43556344 43574618 - protein_coding KNOWN OTTHUMG00000018033.2 18275 2509 13 ENSG00000226015.2 CCT8P1 chr1 147203276 147204932 - processed_pseudogene KNOWN OTTHUMG00000041050.3 1657 1657 1 ENSG00000232004.1 CAP1P2 chr10 43604843 43606251 - processed_pseudogene KNOWN OTTHUMG00000018035.1 1409 1409 1 ENSG00000198298.11 ZNF485 chr10 43606407 43617903 + protein_coding KNOWN OTTHUMG00000018040.2 11497 2397 17 ENSG00000223910.1 ZNF32-AS3 chr10 43628817 43674703 + antisense KNOWN OTTHUMG00000018037.1 45887 1932 5 ENSG00000237389.1 RP11-402L1.4 chr10 43630882 43631564 - lincRNA NOVEL OTTHUMG00000018038.1 683 411 2 ENSG00000238263.1 RP11-402L1.12 chr10 43630947 43631382 + processed_pseudogene KNOWN OTTHUMG00000018042.1 436 436 1 ENSG00000169740.12 ZNF32 chr10 43643859 43648856 - protein_coding KNOWN OTTHUMG00000018043.1 4998 1436 8 ENSG00000226245.1 ZNF32-AS1 chr10 43643872 43645047 + antisense NOVEL OTTHUMG00000018036.1 1176 434 2 ENSG00000230565.1 ZNF32-AS2 chr10 43645942 43648019 + antisense NOVEL OTTHUMG00000018039.1 2078 905 3 ENSG00000228426.1 RP11-402L1.11 chr10 43665668 43667005 + lincRNA NOVEL OTTHUMG00000018041.1 1338 462 2 ENSG00000271173.1 RP11-272J7.6 chr10 43728217 43728728 + processed_pseudogene KNOWN OTTHUMG00000184663.1 512 512 1 ENSG00000236806.1 RPL7AP15 chr1 147223554 147224348 + processed_pseudogene KNOWN OTTHUMG00000041477.2 795 795 1 ENSG00000224162.1 UQCRHP3 chr10 43732334 43732584 + processed_pseudogene KNOWN OTTHUMG00000018046.1 251 251 1 ENSG00000223746.1 TCEB1P30 chr10 43741437 43742350 - processed_pseudogene KNOWN OTTHUMG00000018045.1 914 299 2 ENSG00000234973.4 RP11-272J7.4 chr10 43777562 43778825 - lincRNA NOVEL OTTHUMG00000018047.1 1264 453 4 ENSG00000226790.3 HNRNPA3P1 chr10 43789249 43790387 - processed_pseudogene KNOWN OTTHUMG00000039983.1 1139 1139 1 ENSG00000204187.5 LINC00619 chr10 43845306 43850622 + lincRNA KNOWN OTTHUMG00000018048.2 5317 1121 3 ENSG00000226808.1 LINC00840 chr10 43859411 43895433 + lincRNA NOVEL OTTHUMG00000018049.1 36023 1974 5 ENSG00000236769.1 RP11-168P8.5 chr10 43901365 43912326 - lincRNA NOVEL OTTHUMG00000018052.1 10962 493 2 ENSG00000227029.1 RP11-168P8.3 chr10 43912444 43914236 + lincRNA NOVEL OTTHUMG00000018050.1 1793 513 2 ENSG00000233395.1 LINC00841 chr10 43939003 43944466 + lincRNA NOVEL OTTHUMG00000018053.1 5464 2126 5 ENSG00000238957.1 AL512640.1 chr10 44034540 44034611 + miRNA NOVEL NA 72 72 1 ENSG00000131778.16 CHD1L chr1 147242641 147295766 + protein_coding KNOWN OTTHUMG00000150271.3 53126 3376 156 ENSG00000237590.1 RP11-20J15.2 chr10 44259602 44261813 - lincRNA NOVEL OTTHUMG00000018055.1 2212 841 2 ENSG00000229116.2 RP11-20J15.3 chr10 44282926 44293709 - lincRNA NOVEL OTTHUMG00000018056.2 10784 1452 4 ENSG00000277288.2 RP11-20J15.5 chr10 44292569 44294649 + protein_coding NOVEL OTTHUMG00000189253.1 2081 1714 8 ENSG00000107562.15 CXCL12 chr10 44370165 44386493 - protein_coding KNOWN OTTHUMG00000018054.2 16329 6077 26 ENSG00000214089.3 RP11-256K7.1 chr10 44414649 44415153 - processed_pseudogene KNOWN OTTHUMG00000018057.1 505 505 1 ENSG00000270767.1 RP11-733D4.2 chr10 44488335 44488445 - processed_pseudogene KNOWN OTTHUMG00000184632.1 111 111 1 ENSG00000234580.1 RP11-733D4.1 chr10 44591208 44602104 - lincRNA NOVEL OTTHUMG00000018058.1 10897 732 2 ENSG00000227395.1 EIF2AP4 chr10 44806443 44808223 + processed_pseudogene KNOWN OTTHUMG00000018059.1 1781 1781 1 ENSG00000224812.2 TMEM72-AS1 chr10 44811024 44959689 - antisense NOVEL OTTHUMG00000018062.2 148666 3300 8 ENSG00000234504.2 RP11-285G1.2 chr10 44899614 44920220 - antisense NOVEL OTTHUMG00000018065.2 20607 1444 3 ENSG00000278811.3 LINC00624 chr1 147258885 147517875 - antisense KNOWN OTTHUMG00000041476.3 258991 5564 10 ENSG00000187783.10 TMEM72 chr10 44911200 44937002 + protein_coding KNOWN OTTHUMG00000018067.3 25803 3157 12 ENSG00000223462.2 RP11-285G1.9 chr10 44937508 44955725 + lincRNA NOVEL OTTHUMG00000018061.3 18218 425 2 ENSG00000273363.1 RP11-285G1.14 chr10 44958917 44959458 - sense_intronic NOVEL OTTHUMG00000186468.1 542 542 1 ENSG00000107551.19 RASSF4 chr10 44959407 44995891 + protein_coding KNOWN OTTHUMG00000018060.5 36485 9481 72 ENSG00000165507.8 C10orf10 chr10 44970981 44978810 - protein_coding KNOWN OTTHUMG00000018063.1 7830 2979 6 ENSG00000165511.6 C10orf25 chr10 44997698 45000888 - antisense KNOWN OTTHUMG00000018066.1 3191 3078 2 ENSG00000165512.4 ZNF22 chr10 45000475 45005326 + protein_coding KNOWN OTTHUMG00000018064.1 4852 2551 2 ENSG00000226937.8 CEP164P1 chr10 45002222 45076066 - transcribed_processed_pseudogene KNOWN OTTHUMG00000018069.3 73845 4357 30 ENSG00000277757.3 RP11-285G1.15 chr10 45016080 45147221 - processed_transcript NOVEL OTTHUMG00000188634.2 131142 1219 15 ENSG00000270258.1 DUXAP4 chr10 45055656 45056268 + processed_pseudogene KNOWN OTTHUMG00000184653.2 613 613 1 ENSG00000213226.4 RP11-337C18.4 chr1 147319110 147320224 + processed_pseudogene KNOWN OTTHUMG00000037549.2 1115 960 2 ENSG00000228462.1 RP11-445N18.3 chr10 45073146 45073541 - processed_pseudogene KNOWN OTTHUMG00000018070.1 396 396 1 ENSG00000232554.7 RSU1P2 chr10 45099487 45154596 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000185442.3 55110 3274 22 ENSG00000235690.2 CUBNP3 chr10 45127318 45148914 + unprocessed_pseudogene KNOWN OTTHUMG00000018073.1 21597 1784 10 ENSG00000243349.2 RP11-445N18.7 chr10 45147394 45171389 + processed_transcript NOVEL OTTHUMG00000018074.2 23996 3637 11 ENSG00000236442.1 ANKRD54P1 chr10 45151445 45151915 - processed_pseudogene KNOWN OTTHUMG00000018075.1 471 471 1 ENSG00000230501.1 ANKRD30BP3 chr10 45156775 45176925 + unprocessed_pseudogene KNOWN OTTHUMG00000018076.1 20151 1070 7 ENSG00000263476.1 MIR3156-1 chr10 45164014 45164088 + miRNA KNOWN NA 75 75 1 ENSG00000227683.1 RP11-445N18.5 chr10 45164228 45181427 - lincRNA NOVEL OTTHUMG00000018077.1 17200 535 2 ENSG00000275312.1 RP11-432I13.5 chr10 45180400 45180616 + unprocessed_pseudogene KNOWN OTTHUMG00000187828.1 217 217 1 ENSG00000278531.1 RP11-432I13.6 chr10 45187292 45198323 - unprocessed_pseudogene KNOWN OTTHUMG00000187830.1 11032 882 5 ENSG00000226653.2 OR13Z1P chr1 147419050 147419883 + unitary_pseudogene KNOWN OTTHUMG00000154280.3 834 834 1 ENSG00000207071.1 RNU6-1207P chr10 45188790 45188896 - snRNA KNOWN NA 107 107 1 ENSG00000234993.1 CUBNP2 chr10 45232026 45247361 - unprocessed_pseudogene KNOWN OTTHUMG00000018078.1 15336 1139 7 ENSG00000224402.1 OR6D1P chr10 45258185 45259123 + unitary_pseudogene KNOWN OTTHUMG00000018079.1 939 939 1 ENSG00000256574.5 OR13A1 chr10 45302654 45315608 - protein_coding KNOWN OTTHUMG00000018080.2 12955 2174 9 ENSG00000012779.9 ALOX5 chr10 45374176 45446119 + protein_coding KNOWN OTTHUMG00000018081.3 71944 3730 52 ENSG00000231964.1 RP11-67C2.2 chr10 45444570 45453121 - antisense NOVEL OTTHUMG00000018082.1 8552 462 3 ENSG00000165406.14 MARCH8 chr10 45454585 45594906 - protein_coding KNOWN OTTHUMG00000019345.4 140322 7539 38 ENSG00000172671.18 ZFAND4 chr10 45615501 45672780 - protein_coding KNOWN OTTHUMG00000018085.7 57280 6232 59 ENSG00000230869.1 CTGLF10P chr10 45678692 45700532 + unprocessed_pseudogene KNOWN OTTHUMG00000018083.1 21841 2418 7 ENSG00000237840.5 FAM21FP chr10 45706431 45727231 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000018087.2 20801 2087 21 ENSG00000207209.1 Y_RNA chr1 147420199 147420300 - misc_RNA NOVEL NA 102 102 1 ENSG00000228702.1 RP11-671E7.1 chr10 45725694 45726038 - processed_pseudogene KNOWN OTTHUMG00000018086.1 345 345 1 ENSG00000172661.16 FAM21C chr10 45727200 45792961 + protein_coding KNOWN OTTHUMG00000018089.5 65762 5702 199 ENSG00000270434.1 RP11-175I17.6 chr10 45812648 45812944 - processed_pseudogene KNOWN OTTHUMG00000184633.1 297 297 1 ENSG00000231122.4 FAM25E chr10 45815426 45817588 - protein_coding KNOWN OTTHUMG00000018092.3 2163 588 2 ENSG00000188234.12 AGAP4 chr10 45825594 45853875 - protein_coding KNOWN OTTHUMG00000018088.2 28282 3474 53 ENSG00000239883.7 PARPG1 chr10 45854093 45972154 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000018090.4 118062 3214 19 ENSG00000239152.1 RNA5SP310 chr10 45856307 45856422 + rRNA KNOWN NA 116 116 1 ENSG00000264217.2 RPL35AP25 chr10 45940522 45940851 + processed_pseudogene KNOWN OTTHUMG00000188288.1 330 330 1 ENSG00000265354.3 TIMM23 chr10 45972449 46003734 + protein_coding KNOWN OTTHUMG00000188299.1 31286 1222 7 ENSG00000265733.1 SNORA74 chr10 45984610 45984810 + snoRNA NOVEL NA 201 201 1 ENSG00000272443.1 OR13Z2P chr1 147445579 147446133 + unprocessed_pseudogene KNOWN OTTHUMG00000185763.2 555 555 1 ENSG00000266412.4 NCOA4 chr10 46005088 46030714 - protein_coding KNOWN OTTHUMG00000188314.1 25627 4079 68 ENSG00000263639.4 MSMB chr10 46033307 46046269 - protein_coding KNOWN OTTHUMG00000188315.1 12963 492 7 ENSG00000280012.1 AL589822.1 chr10 46063228 46063766 + pseudogene NOVEL NA 539 533 4 ENSG00000264204.2 AGAP7P chr10 46109621 46131358 + unprocessed_pseudogene KNOWN OTTHUMG00000188316.1 21738 2062 8 ENSG00000263482.3 ANTXRLP1 chr10 46233885 46273557 - unprocessed_pseudogene KNOWN OTTHUMG00000188317.1 39673 1829 14 ENSG00000274209.3 ANTXRL chr10 46286345 46330207 + protein_coding KNOWN OTTHUMG00000188318.3 43863 3101 69 ENSG00000279058.1 AC244230.1 chr10 46337224 46358714 + protein_coding KNOWN NA 21491 2058 9 ENSG00000273225.3 FAM25BP chr10 46369087 46373563 + processed_transcript NOVEL OTTHUMG00000189284.1 4477 570 12 ENSG00000279458.1 CH17-335B8.4 chr10 46370759 46382626 + protein_coding NOVEL OTTHUMG00000189285.2 11868 674 7 ENSG00000264230.6 ANXA8L1 chr10 46375627 46537864 + protein_coding KNOWN OTTHUMG00000018131.4 162238 7179 64 ENSG00000272480.1 OR13Z3P chr1 147482238 147482628 + unprocessed_pseudogene KNOWN OTTHUMG00000185764.2 391 391 1 ENSG00000213412.3 HNRNPA1P33 chr10 46415853 46416413 + processed_pseudogene KNOWN OTTHUMG00000018110.2 561 561 1 ENSG00000204174.5 NPY4R chr10 46461099 46465881 - protein_coding KNOWN OTTHUMG00000018108.2 4783 1956 7 ENSG00000204175.5 GPRIN2 chr10 46549044 46555530 - protein_coding KNOWN OTTHUMG00000018107.1 6487 1968 4 ENSG00000204176.12 SYT15 chr10 46578217 46594173 + protein_coding KNOWN OTTHUMG00000018103.5 15957 7158 36 ENSG00000231187.2 RP11-38L15.3 chr10 46582782 46598145 - antisense NOVEL OTTHUMG00000018106.2 15364 991 4 ENSG00000229227.7 RP11-38L15.2 chr10 46597918 46612154 + lincRNA NOVEL OTTHUMG00000018105.5 14237 2755 20 ENSG00000165874.11 FAM35BP chr10 46610474 46652025 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000018104.3 41552 3630 11 ENSG00000272430.1 RP11-38L15.8 chr10 46632387 46635472 + lincRNA NOVEL OTTHUMG00000185782.1 3086 551 4 ENSG00000229927.2 RHEBP1 chr10 46634911 46635466 - processed_pseudogene KNOWN OTTHUMG00000018102.2 556 556 1 ENSG00000274186.1 Metazoa_SRP chr10 46648948 46649276 + misc_RNA NOVEL NA 329 329 1 ENSG00000280816.1 Metazoa_SRP chr1 8862002 8862260 + misc_RNA NOVEL NA 259 259 1 ENSG00000116128.8 BCL9 chr1 147541412 147626216 + protein_coding KNOWN OTTHUMG00000014031.2 84805 6420 29 ENSG00000280913.1 CTSLP2 chr10 46753605 46759740 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000189702.2 6136 1476 10 ENSG00000265366.5 GLUD1P7 chr10 46759019 46786770 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000018100.3 27752 669 16 ENSG00000215097.3 DUSP8P3 chr10 46774421 46776180 - processed_pseudogene KNOWN OTTHUMG00000018099.2 1760 1760 1 ENSG00000204177.9 BMS1P1 chr10 46786674 46811989 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000018098.5 25316 4561 18 ENSG00000238405.1 RNA5SP311 chr10 46807458 46807573 - rRNA KNOWN NA 116 116 1 ENSG00000243289.1 CTGLF8P chr10 46816516 46832476 + unprocessed_pseudogene KNOWN OTTHUMG00000018095.2 15961 363 4 ENSG00000150175.13 FRMPD2L2 chr10 46870858 46894562 + unprocessed_pseudogene KNOWN OTTHUMG00000018093.3 23705 1347 9 ENSG00000204179.9 PTPN20A chr10 46911396 47002488 + protein_coding KNOWN OTTHUMG00000018094.9 91093 4506 209 ENSG00000266524.2 GDF10 chr10 47300386 47313547 + protein_coding KNOWN OTTHUMG00000188319.1 13162 2458 3 ENSG00000263761.2 GDF2 chr10 47322490 47326270 + protein_coding KNOWN OTTHUMG00000188320.1 3781 1955 2 ENSG00000162836.10 ACP6 chr1 147629652 147670496 - protein_coding KNOWN OTTHUMG00000014019.6 40845 11960 62 ENSG00000265203.1 RBP3 chr10 47348371 47357875 + protein_coding KNOWN OTTHUMG00000188321.1 9505 4276 4 ENSG00000265383.1 AL731561.1 chr10 47351740 47351838 - miRNA NOVEL NA 99 99 1 ENSG00000265763.3 ZNF488 chr10 47365496 47384273 - protein_coding KNOWN OTTHUMG00000188322.1 18778 3496 5 ENSG00000265190.5 ANXA8 chr10 47460162 47484158 - protein_coding KNOWN OTTHUMG00000188209.3 23997 4955 62 ENSG00000270369.1 RP11-144G6.13 chr10 47484457 47484754 - processed_pseudogene KNOWN OTTHUMG00000184691.1 298 298 1 ENSG00000189090.7 FAM25G chr10 47487219 47491693 - protein_coding KNOWN OTTHUMG00000018117.2 4475 466 6 ENSG00000224919.1 RP11-144G6.4 chr10 47496212 47502195 + antisense NOVEL OTTHUMG00000018119.1 5984 234 2 ENSG00000204172.10 AGAP10 chr10 47501854 47549750 - protein_coding KNOWN OTTHUMG00000018115.3 47897 2848 16 ENSG00000254929.5 RP11-144G6.12 chr10 47517816 47553514 - processed_transcript NOVEL OTTHUMG00000167454.2 35699 1625 21 ENSG00000252877.1 RNA5SP312 chr10 47532352 47532467 + rRNA KNOWN NA 116 116 1 ENSG00000277762.1 Metazoa_SRP chr1 147689256 147689537 + misc_RNA NOVEL NA 282 282 1 ENSG00000251079.5 BMS1P2 chr10 47538377 47551954 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000018113.3 13578 2153 17 ENSG00000265630.2 GLUD1P8 chr10 47563604 47569697 + unprocessed_pseudogene KNOWN OTTHUMG00000018118.2 6094 203 3 ENSG00000215065.3 DUSP8P4 chr10 47564256 47566016 + processed_pseudogene KNOWN OTTHUMG00000018111.2 1761 1761 1 ENSG00000266217.2 CTSLP7 chr10 47581211 47582321 - unprocessed_pseudogene KNOWN OTTHUMG00000018112.2 1111 394 3 ENSG00000264404.2 LINC00864 chr10 47588681 47599830 - lincRNA NOVEL OTTHUMG00000018097.4 11150 1217 5 ENSG00000189014.7 FAM35DP chr10 47689707 47730436 + unprocessed_pseudogene KNOWN OTTHUMG00000018121.1 40730 2712 8 ENSG00000276544.1 Metazoa_SRP chr10 47692399 47692727 - misc_RNA NOVEL NA 329 329 1 ENSG00000226964.1 RHEBP2 chr10 47706203 47706802 + processed_pseudogene KNOWN OTTHUMG00000018122.1 600 600 1 ENSG00000277758.3 SYT15 chr10 47750864 47763592 - protein_coding NOVEL OTTHUMG00000189287.1 12729 5526 23 ENSG00000276850.3 CH17-360D5.2 chr10 47908064 47991850 - lincRNA NOVEL OTTHUMG00000189091.2 83787 2467 10 ENSG00000227139.1 RP11-533N14.3 chr1 147697794 147699335 + lincRNA NOVEL OTTHUMG00000042022.1 1542 446 2 ENSG00000264717.4 CH17-360D5.1 chr10 47918739 47923524 + lincRNA NOVEL OTTHUMG00000188323.1 4786 1956 5 ENSG00000273760.1 CH17-360D5.3 chr10 47970043 47973496 - lincRNA NOVEL OTTHUMG00000189092.1 3454 826 2 ENSG00000276430.2 FAM25C chr10 47995355 47999791 - protein_coding KNOWN OTTHUMG00000018130.4 4437 319 3 ENSG00000265018.5 CTGLF12P chr10 48009873 48031640 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000018164.4 21768 2400 16 ENSG00000252149.1 RNA5SP315 chr10 48040462 48040577 + rRNA KNOWN NA 116 116 1 ENSG00000270025.2 BMS1P7 chr10 48050282 48060016 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000018163.3 9735 1052 7 ENSG00000278561.1 PTPN20CP chr10 48064308 48119455 - unprocessed_pseudogene KNOWN OTTHUMG00000018166.3 55148 920 7 ENSG00000232462.1 RP11-13E1.5 chr10 48155325 48156134 - sense_intronic NOVEL OTTHUMG00000018169.1 810 421 2 ENSG00000170324.18 FRMPD2 chr10 48156558 48274870 - protein_coding KNOWN OTTHUMG00000018171.5 118313 7872 112 ENSG00000225482.1 RP11-542E6.3 chr10 48292699 48293417 + processed_pseudogene KNOWN OTTHUMG00000018170.1 719 719 1 ENSG00000265107.2 GJA5 chr1 147756199 147773362 - protein_coding KNOWN OTTHUMG00000014020.4 17164 3292 6 ENSG00000107643.14 MAPK8 chr10 48306639 48439360 + protein_coding KNOWN OTTHUMG00000018172.2 132722 9629 115 ENSG00000279822.1 RP11-541M12.6 chr10 48443836 48445820 - TEC KNOWN OTTHUMG00000176172.1 1985 1985 1 ENSG00000128805.13 ARHGAP22 chr10 48446034 48656265 - protein_coding KNOWN OTTHUMG00000018176.5 210232 6783 89 ENSG00000248682.1 ARHGAP22-IT1 chr10 48510525 48511589 - sense_intronic NOVEL OTTHUMG00000159998.1 1065 470 2 ENSG00000231906.1 RP11-541M12.3 chr10 48546472 48546713 - processed_pseudogene KNOWN OTTHUMG00000018173.1 242 242 1 ENSG00000251413.1 RP11-534L6.5 chr10 48624004 48625093 - sense_intronic NOVEL OTTHUMG00000159999.1 1090 597 2 ENSG00000236800.1 RP11-534L6.2 chr10 48664199 48672424 - lincRNA NOVEL OTTHUMG00000018174.1 8226 335 2 ENSG00000128815.16 WDFY4 chr10 48684876 48982956 + protein_coding KNOWN OTTHUMG00000018180.5 298081 13688 133 ENSG00000228754.1 RP11-534L6.3 chr10 48745545 48746128 - processed_pseudogene KNOWN OTTHUMG00000018177.1 584 584 1 ENSG00000228403.1 RP11-563N6.6 chr10 48878022 48878649 + sense_intronic NOVEL OTTHUMG00000018179.1 628 273 2 ENSG00000274415.1 RP11-433J22.2 chr1 147757185 147758434 + antisense NOVEL OTTHUMG00000042023.3 1250 668 4 ENSG00000241577.1 RP11-523O18.7 chr10 48883955 48935213 - sense_overlapping NOVEL OTTHUMG00000018183.1 51259 559 3 ENSG00000165383.9 LRRC18 chr10 48909483 48935190 - protein_coding KNOWN OTTHUMG00000018182.1 25708 1631 5 ENSG00000233665.7 RP11-523O18.5 chr10 48976554 48993046 - processed_transcript NOVEL OTTHUMG00000018181.5 16493 1945 8 ENSG00000226576.1 RP11-523O18.1 chr10 48984564 49018897 + antisense NOVEL OTTHUMG00000018185.1 34334 474 2 ENSG00000264800.1 MIR4294 chr10 48985512 48985587 - miRNA KNOWN NA 76 76 1 ENSG00000165633.11 VSTM4 chr10 49014245 49115509 - protein_coding KNOWN OTTHUMG00000018184.3 101265 8633 13 ENSG00000234736.4 FAM170B-AS1 chr10 49121839 49151547 + antisense NOVEL OTTHUMG00000018186.1 29709 2273 18 ENSG00000172538.6 FAM170B chr10 49131154 49134008 - protein_coding KNOWN OTTHUMG00000018187.1 2855 1401 2 ENSG00000204161.12 C10orf128 chr10 49154725 49188585 - protein_coding KNOWN OTTHUMG00000018188.5 33861 4123 43 ENSG00000236208.1 C10orf71-AS1 chr10 49296112 49299018 - antisense NOVEL OTTHUMG00000018189.1 2907 963 4 ENSG00000234190.1 RP11-433J22.3 chr1 147777590 147788953 + lincRNA NOVEL OTTHUMG00000042020.1 11364 480 2 ENSG00000177354.10 C10orf71 chr10 49299193 49327487 + protein_coding KNOWN OTTHUMG00000018190.2 28295 5411 5 ENSG00000165606.7 DRGX chr10 49364181 49396016 - protein_coding KNOWN OTTHUMG00000018192.3 31836 2890 13 ENSG00000235939.1 RP11-123B3.2 chr10 49419277 49472903 + antisense NOVEL OTTHUMG00000018194.1 53627 435 2 ENSG00000225830.9 ERCC6 chr10 49455368 49539538 - protein_coding KNOWN OTTHUMG00000018195.3 84171 14802 80 ENSG00000243251.5 PGBD3 chr10 49515105 49524227 - protein_coding KNOWN OTTHUMG00000018193.1 9123 2212 2 ENSG00000258838.4 ERCC6-PGBD3 chr10 49515201 49539538 - protein_coding KNOWN OTTHUMG00000171334.1 24338 3518 12 ENSG00000271237.1 RP11-140C5.3 chr10 49551308 49552652 + processed_pseudogene KNOWN OTTHUMG00000184651.1 1345 607 3 ENSG00000070748.16 CHAT chr10 49609095 49665104 + protein_coding KNOWN OTTHUMG00000018198.2 56010 2994 106 ENSG00000187714.6 SLC18A3 chr10 49610301 49612720 + protein_coding KNOWN OTTHUMG00000018196.1 2420 2420 1 ENSG00000178645.11 C10orf53 chr10 49679651 49710261 + protein_coding KNOWN OTTHUMG00000018199.1 30611 4316 12 ENSG00000223728.3 RP11-314N2.2 chr1 147840962 147842359 + processed_pseudogene KNOWN OTTHUMG00000037548.2 1398 1398 1 ENSG00000197444.8 OGDHL chr10 49734643 49762379 - protein_coding KNOWN OTTHUMG00000018200.1 27737 5724 76 ENSG00000226389.3 RP11-507K13.4 chr10 49771841 49773299 + processed_pseudogene KNOWN OTTHUMG00000018197.1 1459 1053 2 ENSG00000229870.1 RP11-507K13.6 chr10 49815096 49815562 + processed_pseudogene KNOWN OTTHUMG00000157152.1 467 467 1 ENSG00000227345.7 PARG chr10 49818279 49970203 - protein_coding KNOWN OTTHUMG00000018201.3 151925 5129 77 ENSG00000230166.1 RP11-526K21.2 chr10 49909613 49909942 + processed_pseudogene KNOWN OTTHUMG00000018202.1 330 330 1 ENSG00000204152.9 TIMM23B chr10 49942033 49974850 + protein_coding KNOWN OTTHUMG00000018213.3 32818 3056 27 ENSG00000223111.1 SNORA74 chr10 49954214 49954414 + snoRNA NOVEL NA 201 201 1 ENSG00000178440.5 LINC00843 chr10 49972763 49982053 + lincRNA NOVEL OTTHUMG00000018218.2 9291 711 5 ENSG00000222108.1 RNA5SP317 chr10 49979665 49979780 - rRNA KNOWN NA 116 116 1 ENSG00000204149.8 AGAP6 chr10 49982190 50010499 + protein_coding KNOWN OTTHUMG00000018220.4 28310 3160 35 ENSG00000121634.5 GJA8 chr1 147907956 147909257 + protein_coding KNOWN OTTHUMG00000024085.1 1302 1302 1 ENSG00000235618.6 FAM21EP chr10 50021182 50067803 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000018221.1 46622 2549 17 ENSG00000226631.1 SLC9A3P3 chr10 50025135 50027363 - processed_pseudogene KNOWN OTTHUMG00000018219.1 2229 2229 1 ENSG00000099290.14 FAM21A chr10 50067888 50133506 + protein_coding KNOWN OTTHUMG00000018225.3 65619 5159 189 ENSG00000233011.1 SLC9A3P1 chr10 50150603 50152287 + processed_pseudogene KNOWN OTTHUMG00000018226.1 1685 1685 1 ENSG00000188611.13 ASAH2 chr10 50182778 50248610 - protein_coding KNOWN OTTHUMG00000018223.3 65833 6985 86 ENSG00000225137.1 DYNC1I2P1 chr10 50264978 50266815 + processed_pseudogene KNOWN OTTHUMG00000018224.1 1838 1838 1 ENSG00000198964.12 SGMS1 chr10 50305586 50625163 - protein_coding KNOWN OTTHUMG00000018231.6 319578 6429 58 ENSG00000279863.1 RP11-521C22.2 chr10 50334538 50336123 + TEC KNOWN OTTHUMG00000187416.1 1586 1586 1 ENSG00000279291.1 AC069547.1 chr10 50393006 50394561 + protein_coding KNOWN NA 1556 1556 1 ENSG00000279027.1 RP11-521C22.3 chr10 50393006 50394561 - TEC KNOWN OTTHUMG00000187418.1 1556 1556 1 ENSG00000188092.13 GPR89B chr1 147928393 147993521 + protein_coding KNOWN OTTHUMG00000013452.5 65129 5143 76 ENSG00000225303.2 RP11-512N4.2 chr10 50472814 50474246 + antisense NOVEL OTTHUMG00000018228.2 1433 373 2 ENSG00000280509.1 AL117341.1 chr10 50562231 50562330 - miRNA NOVEL NA 100 100 1 ENSG00000238523.1 RNU7-107P chr10 50590652 50590712 - snRNA KNOWN NA 61 61 1 ENSG00000226200.5 SGMS1-AS1 chr10 50624951 50641451 + antisense NOVEL OTTHUMG00000018230.2 16501 12420 8 ENSG00000231588.1 RP11-50E11.2 chr10 50629532 50631075 - processed_pseudogene KNOWN OTTHUMG00000018229.1 1544 1544 1 ENSG00000231345.3 BEND3P1 chr10 50655967 50660472 + transcribed_processed_pseudogene KNOWN OTTHUMG00000018236.1 4506 2966 3 ENSG00000232706.3 NUTM2HP chr10 50676743 50686326 + unprocessed_pseudogene KNOWN OTTHUMG00000018235.2 9584 2498 8 ENSG00000226168.1 RP11-564C4.4 chr10 50695592 50695981 + processed_pseudogene KNOWN OTTHUMG00000018234.1 390 390 1 ENSG00000230011.2 CTSLP4 chr10 50705380 50708906 - unprocessed_pseudogene KNOWN OTTHUMG00000018237.1 3527 1002 7 ENSG00000213667.3 PGGT1BP1 chr10 50726947 50727969 - processed_pseudogene KNOWN OTTHUMG00000018233.1 1023 1023 1 ENSG00000278267.1 MIR6859-3 chr1 17369 17436 - miRNA KNOWN NA 68 68 1 ENSG00000278566.1 OR4F29 chr1 450740 451678 - protein_coding KNOWN OTTHUMG00000002860.1 939 939 1 ENSG00000274258.1 MIR6728 chr1 8866502 8866590 - miRNA KNOWN NA 89 89 1 ENSG00000215859.7 RP6-74O6.2 chr1 147993862 148014956 - lincRNA NOVEL OTTHUMG00000013940.2 21095 3609 13 ENSG00000204147.8 ASAH2B chr10 50739318 50816495 + protein_coding KNOWN OTTHUMG00000018239.1 77178 4309 19 ENSG00000148584.13 A1CF chr10 50799409 50885675 - protein_coding KNOWN OTTHUMG00000018240.5 86267 9603 111 ENSG00000229711.1 RP11-449O16.2 chr10 50822692 50824525 - sense_intronic NOVEL OTTHUMG00000018238.1 1834 636 4 ENSG00000236944.1 CCDC58P2 chr10 50962993 50963358 - processed_pseudogene KNOWN OTTHUMG00000018242.1 366 366 1 ENSG00000261368.1 RP11-96B5.4 chr10 50964270 50965220 + lincRNA NOVEL OTTHUMG00000176173.1 951 951 1 ENSG00000185532.13 PRKG1 chr10 50991358 52298350 + protein_coding KNOWN OTTHUMG00000018248.5 1306993 7506 73 ENSG00000223502.1 RP11-96B5.3 chr10 51062579 51068553 - antisense NOVEL OTTHUMG00000018241.2 5975 421 2 ENSG00000231132.1 RP11-40C11.2 chr10 51244894 51245806 - antisense NOVEL OTTHUMG00000018243.1 913 446 3 ENSG00000266591.1 AC022537.1 chr10 51265325 51265452 + miRNA NOVEL NA 128 128 1 ENSG00000207813.1 MIR605 chr10 51299573 51299655 + miRNA KNOWN NA 83 83 1 ENSG00000244211.3 PDZK1P2 chr1 147994301 148009592 - unprocessed_pseudogene KNOWN OTTHUMG00000074107.1 15292 1350 7 ENSG00000235279.1 RP11-539E19.2 chr10 51302566 51306709 + sense_intronic NOVEL OTTHUMG00000018245.1 4144 400 2 ENSG00000213659.4 RSU1P3 chr10 51319826 51320660 + processed_pseudogene KNOWN OTTHUMG00000018244.2 835 835 1 ENSG00000278260.1 AL157399.1 chr10 51526341 51526433 + miRNA NOVEL NA 93 93 1 ENSG00000216022.1 AC068062.1 chr10 51639743 51639832 - miRNA NOVEL NA 90 90 1 ENSG00000177613.8 CSTF2T chr10 51695487 51699591 - protein_coding KNOWN OTTHUMG00000018246.1 4105 4105 1 ENSG00000236671.6 PRKG1-AS1 chr10 52230742 52314128 - antisense NOVEL OTTHUMG00000018251.2 83387 2873 14 ENSG00000107984.8 DKK1 chr10 52314296 52318042 + protein_coding KNOWN OTTHUMG00000018247.1 3747 2206 13 ENSG00000213657.3 RP11-346D6.4 chr10 52389112 52389488 - processed_pseudogene KNOWN OTTHUMG00000018249.1 377 377 1 ENSG00000227972.1 PRKRIRP3 chr10 52411135 52413492 + processed_pseudogene KNOWN OTTHUMG00000018250.1 2358 2266 2 ENSG00000231131.5 LINC01468 chr10 52450874 52470533 - lincRNA NOVEL OTTHUMG00000018252.2 19660 1177 7 ENSG00000273059.1 XXyac-YX155B6.7 chr1 148011799 148012228 + lincRNA NOVEL OTTHUMG00000186412.1 430 430 1 ENSG00000228651.1 RP11-556E13.1 chr10 52556702 52755409 - antisense NOVEL OTTHUMG00000018253.1 198708 650 5 ENSG00000165471.6 MBL2 chr10 52765380 52771700 - protein_coding KNOWN OTTHUMG00000150270.1 6321 3569 4 ENSG00000201196.1 Y_RNA chr10 52852607 52852703 + misc_RNA NOVEL NA 97 97 1 ENSG00000227121.1 RP11-319F12.2 chr10 52973488 52975815 - lincRNA NOVEL OTTHUMG00000018255.1 2328 415 3 ENSG00000231399.1 SNRPEP8 chr10 53038285 53038544 + processed_pseudogene KNOWN OTTHUMG00000018256.1 260 260 1 ENSG00000226296.1 RP11-71J2.1 chr10 53291072 53311065 - lincRNA NOVEL OTTHUMG00000018257.1 19994 597 2 ENSG00000252161.1 RNA5SP318 chr10 53458197 53458288 + rRNA KNOWN NA 92 92 1 ENSG00000233805.1 RP11-449J3.3 chr10 53766400 53766614 + processed_pseudogene KNOWN OTTHUMG00000102139.1 215 215 1 ENSG00000150275.16 PCDH15 chr10 53802771 55627942 - protein_coding KNOWN OTTHUMG00000018259.13 1825172 15357 865 ENSG00000263921.1 AC013737.1 chr10 54347963 54348014 - miRNA NOVEL NA 52 52 1 ENSG00000206791.1 RNU1-129P chr1 148014417 148014583 - snRNA KNOWN NA 167 167 1 ENSG00000252252.1 RNU6-687P chr10 54452423 54452511 - snRNA KNOWN NA 89 89 1 ENSG00000234173.1 RP11-257I14.1 chr10 54486230 54656051 + antisense NOVEL OTTHUMG00000045026.1 169822 2300 6 ENSG00000224697.1 NEFMP1 chr10 54599678 54600683 + processed_pseudogene KNOWN OTTHUMG00000018258.2 1006 1006 1 ENSG00000221594.1 MIR548F1 chr10 54607874 54607957 - miRNA KNOWN NA 84 84 1 ENSG00000236958.1 RP11-264A11.1 chr10 54864674 54869122 - sense_intronic NOVEL OTTHUMG00000144163.1 4449 207 2 ENSG00000236744.2 RP11-168O22.1 chr10 55247755 55597233 - sense_intronic NOVEL OTTHUMG00000144166.2 349479 439 4 ENSG00000223800.1 RP11-598C10.2 chr10 55468327 55469222 + lincRNA NOVEL OTTHUMG00000144165.1 896 316 2 ENSG00000228048.1 RP11-598C10.1 chr10 55506219 55513217 + lincRNA NOVEL OTTHUMG00000144164.1 6999 436 2 ENSG00000249860.3 MTRNR2L5 chr10 55599303 55600041 + protein_coding KNOWN OTTHUMG00000184965.1 739 739 1 ENSG00000236993.2 GAPDHP21 chr10 55667341 55668350 - processed_pseudogene KNOWN OTTHUMG00000018260.2 1010 1010 1 ENSG00000274372.3 RP11-94I2.4 chr1 148021850 148025931 + lincRNA NOVEL OTTHUMG00000013747.3 4082 588 5 ENSG00000270541.1 RP11-478B11.2 chr10 55746551 55746908 + processed_pseudogene KNOWN OTTHUMG00000184650.1 358 358 1 ENSG00000122952.15 ZWINT chr10 56357228 56361275 - protein_coding KNOWN OTTHUMG00000018261.2 4048 2378 63 ENSG00000238707.1 SNORD2 chr10 56595963 56596031 - snoRNA NOVEL NA 69 69 1 ENSG00000276818.1 AC026393.1 chr10 57095699 57095781 + miRNA NOVEL NA 83 83 1 ENSG00000264747.1 MIR3924 chr10 57304479 57304559 - miRNA KNOWN NA 81 81 1 ENSG00000235810.1 RP11-550A9.1 chr10 57513157 57513425 + processed_pseudogene KNOWN OTTHUMG00000018262.1 269 269 1 ENSG00000223841.1 RP11-448K10.1 chr10 57955295 57957178 + processed_pseudogene KNOWN OTTHUMG00000018263.1 1884 1884 1 ENSG00000270192.1 MRPS35P3 chr10 57982285 57982993 + processed_pseudogene KNOWN OTTHUMG00000184649.1 709 709 1 ENSG00000232115.1 RP11-123G9.1 chr10 58106423 58106879 - processed_pseudogene KNOWN OTTHUMG00000018264.1 457 457 1 ENSG00000151151.5 IPMK chr10 58191517 58267934 - protein_coding KNOWN OTTHUMG00000018268.1 76418 6133 6 ENSG00000206585.1 RNVU1-7 chr1 148038753 148038916 - snRNA KNOWN NA 164 164 1 ENSG00000180221.6 TPT1P10 chr10 58212541 58213036 - processed_pseudogene KNOWN OTTHUMG00000018265.1 496 496 1 ENSG00000122873.10 CISD1 chr10 58269058 58289586 + protein_coding KNOWN OTTHUMG00000018266.2 20529 2857 15 ENSG00000228527.1 RP11-179B15.5 chr10 58304553 58305621 + lincRNA NOVEL OTTHUMG00000018267.1 1069 328 2 ENSG00000261076.1 RP11-179B15.6 chr10 58325614 58327030 - lincRNA NOVEL OTTHUMG00000176178.1 1417 1417 1 ENSG00000072401.13 UBE2D1 chr10 58334975 58370753 + protein_coding KNOWN OTTHUMG00000018269.2 35779 3486 17 ENSG00000108064.9 TFAM chr10 58385022 58399221 + protein_coding KNOWN OTTHUMG00000018270.1 14200 5606 27 ENSG00000122870.10 BICC1 chr10 58513140 58831437 + protein_coding KNOWN OTTHUMG00000018271.3 318298 6569 33 ENSG00000281826.1 AC012168.1 chr10 58694927 58695005 - miRNA NOVEL NA 79 79 1 ENSG00000183055.5 FAM133CP chr10 58715554 58716257 + processed_pseudogene KNOWN OTTHUMG00000018272.1 704 704 1 ENSG00000252076.1 RN7SKP196 chr10 58869184 58869528 + misc_RNA KNOWN NA 345 345 1 ENSG00000229828.2 PDE4DIP1 chr1 148080598 148093883 + unprocessed_pseudogene KNOWN OTTHUMG00000013879.3 13286 1641 11 ENSG00000237949.1 LINC00844 chr10 58999626 59001543 + lincRNA NOVEL OTTHUMG00000018273.1 1918 477 2 ENSG00000226888.2 RP11-561G1.3 chr10 59088701 59089039 - processed_pseudogene KNOWN OTTHUMG00000018275.2 339 339 1 ENSG00000226557.1 TRAF6P1 chr10 59136625 59138182 - processed_pseudogene KNOWN OTTHUMG00000018274.1 1558 1558 1 ENSG00000165443.10 PHYHIPL chr10 59176590 59247774 + protein_coding KNOWN OTTHUMG00000018276.2 71185 4093 18 ENSG00000148541.11 FAM13C chr10 59246129 59363181 - protein_coding KNOWN OTTHUMG00000018277.11 117053 6753 168 ENSG00000236556.1 RP11-443O13.3 chr10 59282147 59282835 + antisense NOVEL OTTHUMG00000018278.1 689 336 2 ENSG00000280779.1 AC025038.1 chr10 59340779 59340862 - miRNA NOVEL NA 84 84 1 ENSG00000235469.1 MRPL50P4 chr10 59551404 59551878 - processed_pseudogene KNOWN OTTHUMG00000018281.1 475 475 1 ENSG00000235140.1 RP11-135D11.2 chr10 59589150 59611248 + lincRNA NOVEL OTTHUMG00000018280.1 22099 537 4 ENSG00000165449.10 SLC16A9 chr10 59650761 59736002 - protein_coding KNOWN OTTHUMG00000018283.4 85242 4429 15 ENSG00000263956.4 NBPF11 chr1 148102046 148152322 - protein_coding KNOWN OTTHUMG00000013880.9 50277 5947 135 ENSG00000227877.5 LINC00948 chr10 59736692 59756041 - processed_transcript NOVEL OTTHUMG00000018282.5 19350 2941 33 ENSG00000108091.10 CCDC6 chr10 59788763 59906656 - protein_coding KNOWN OTTHUMG00000018284.2 117894 7345 14 ENSG00000235931.2 LINC01553 chr10 59955430 59960913 - lincRNA KNOWN OTTHUMG00000018285.2 5484 4602 6 ENSG00000151150.19 ANK3 chr10 60026298 60733490 - protein_coding KNOWN OTTHUMG00000018288.14 707193 25614 354 ENSG00000232682.2 RP11-388P9.2 chr10 60050668 60060743 + antisense NOVEL OTTHUMG00000018286.2 10076 1608 4 ENSG00000202190.1 Y_RNA chr10 60081741 60081854 + misc_RNA NOVEL NA 114 114 1 ENSG00000122872.8 ARL4P chr10 60684505 60685209 + processed_pseudogene KNOWN OTTHUMG00000018289.2 705 705 1 ENSG00000254271.1 RP11-131N11.4 chr10 60734342 60741828 + lincRNA NOVEL OTTHUMG00000164644.1 7487 434 2 ENSG00000170312.14 CDK1 chr10 60778331 60794852 + protein_coding KNOWN OTTHUMG00000018290.4 16522 3931 53 ENSG00000072422.15 RHOBTB1 chr10 60869438 61001440 - protein_coding KNOWN OTTHUMG00000018292.1 132003 4841 34 ENSG00000225080.1 PFN1P4 chr1 148129497 148129898 + processed_pseudogene KNOWN OTTHUMG00000043429.1 402 402 1 ENSG00000223107.1 RNU2-72P chr10 60912765 60912927 - snRNA KNOWN NA 163 163 1 ENSG00000227244.2 LINC00845 chr10 61016275 61026420 + lincRNA NOVEL OTTHUMG00000018291.1 10146 696 2 ENSG00000196932.10 TMEM26 chr10 61406643 61453450 - protein_coding KNOWN OTTHUMG00000018293.3 46808 6907 26 ENSG00000237233.2 TMEM26-AS1 chr10 61452639 61481956 + antisense NOVEL OTTHUMG00000018294.2 29318 863 3 ENSG00000183346.6 C10orf107 chr10 61662961 61766766 + protein_coding KNOWN OTTHUMG00000018295.3 103806 1685 10 ENSG00000272592.1 RP11-63A2.2 chr10 61684892 61685388 - antisense NOVEL OTTHUMG00000186278.1 497 497 1 ENSG00000233643.2 RP11-491H19.1 chr10 61781745 61821246 - lincRNA NOVEL OTTHUMG00000018296.2 39502 510 5 ENSG00000150347.13 ARID5B chr10 61901300 62096944 + protein_coding KNOWN OTTHUMG00000018298.1 195645 8164 17 ENSG00000221272.2 AC067742.1 chr10 61926936 61927018 - miRNA NOVEL NA 83 83 1 ENSG00000221094.1 AL671972.1 chr10 62116215 62116301 + miRNA NOVEL NA 87 87 1 ENSG00000198658.4 ABHD17AP1 chr1 148146395 148149566 + unprocessed_pseudogene KNOWN OTTHUMG00000047949.3 3172 933 2 ENSG00000182010.9 RTKN2 chr10 62183035 62268707 - protein_coding KNOWN OTTHUMG00000018299.5 85673 9548 26 ENSG00000234756.1 RP11-120C12.3 chr10 62289521 62304033 + lincRNA NOVEL OTTHUMG00000018301.1 14513 706 3 ENSG00000240940.3 RN7SL591P chr10 62350006 62350297 + misc_RNA KNOWN NA 292 292 1 ENSG00000138311.14 ZNF365 chr10 62374192 62672011 + protein_coding KNOWN OTTHUMG00000018302.3 297820 9073 54 ENSG00000234489.1 ALDH7A1P4 chr10 62741208 62741385 - processed_pseudogene KNOWN OTTHUMG00000018305.1 178 178 1 ENSG00000238280.1 RP11-436D10.3 chr10 62793562 62805887 - antisense NOVEL OTTHUMG00000018307.1 12326 688 3 ENSG00000181915.4 ADO chr10 62804857 62808483 + protein_coding KNOWN OTTHUMG00000018306.2 3627 3627 1 ENSG00000122877.12 EGR2 chr10 62811996 62919900 - protein_coding KNOWN OTTHUMG00000018308.4 107905 3689 17 ENSG00000199446.1 RNU6-543P chr10 63110139 63110246 + snRNA KNOWN NA 108 108 1 ENSG00000224301.1 RP11-144G16.1 chr10 63123938 63125537 - antisense NOVEL OTTHUMG00000018310.1 1600 505 3 ENSG00000236269.1 ENO1-IT1 chr1 8875788 8878007 - sense_intronic NOVEL OTTHUMG00000001778.1 2220 744 2 ENSG00000227733.7 RP4-565E6.1 chr1 148159213 148254985 - lincRNA NOVEL OTTHUMG00000013881.10 95773 9520 79 ENSG00000148572.13 NRBF2 chr10 63133247 63155031 + protein_coding KNOWN OTTHUMG00000018309.2 21785 1901 14 ENSG00000171988.16 JMJD1C chr10 63167221 63465881 - protein_coding KNOWN OTTHUMG00000018311.5 298661 10945 106 ENSG00000234369.1 TATDN1P1 chr10 63222155 63223045 + processed_pseudogene KNOWN OTTHUMG00000018312.1 891 891 1 ENSG00000270421.1 RP11-351O1.4 chr10 63358745 63359104 + processed_pseudogene KNOWN OTTHUMG00000184648.1 360 360 1 ENSG00000221063.2 MIR1296 chr10 63372942 63373053 - miRNA KNOWN NA 112 112 1 ENSG00000235816.3 PRELID1P3 chr10 63427297 63427939 + processed_pseudogene KNOWN OTTHUMG00000018316.1 643 643 1 ENSG00000272767.1 JMJD1C-AS1 chr10 63465229 63466563 + antisense KNOWN OTTHUMG00000186280.1 1335 1335 1 ENSG00000224412.1 RP11-351O1.3 chr10 63489461 63489638 + processed_pseudogene KNOWN OTTHUMG00000018317.1 178 178 1 ENSG00000165476.11 REEP3 chr10 63521363 63625123 + protein_coding KNOWN OTTHUMG00000018318.4 103761 5205 16 ENSG00000232075.1 MRPL35P2 chr10 63634317 63634827 - processed_pseudogene KNOWN OTTHUMG00000018319.1 511 511 1 ENSG00000232265.6 XXyac-YX155B6.5 chr1 148162360 148186630 + lincRNA NOVEL OTTHUMG00000043431.5 24271 2813 25 ENSG00000270352.1 RP11-111N20.4 chr10 63658074 63658521 + processed_pseudogene KNOWN OTTHUMG00000184647.1 448 448 1 ENSG00000228566.1 RP11-170M17.1 chr10 63664664 63990568 + lincRNA NOVEL OTTHUMG00000018320.1 325905 794 3 ENSG00000213609.3 RP11-170M17.2 chr10 63902451 63903245 - processed_pseudogene KNOWN OTTHUMG00000018321.1 795 795 1 ENSG00000226426.1 RP11-174J11.1 chr10 64036345 64037280 - lincRNA NOVEL OTTHUMG00000018322.1 936 622 2 ENSG00000235489.4 DBF4P1 chr10 64168959 64170850 - processed_pseudogene KNOWN OTTHUMG00000018323.1 1892 1892 1 ENSG00000233900.1 RPL17P35 chr10 64620374 64620922 - processed_pseudogene KNOWN OTTHUMG00000018324.1 549 549 1 ENSG00000270648.1 CYP2C61P chr10 64762883 64763172 - processed_pseudogene KNOWN OTTHUMG00000184693.1 290 290 1 ENSG00000216740.2 ANXA2P3 chr10 64825572 64826579 + processed_pseudogene KNOWN OTTHUMG00000018326.1 1008 1008 1 ENSG00000224714.2 RP11-179K3.2 chr10 64901136 64924518 - lincRNA NOVEL OTTHUMG00000018325.2 23383 2572 2 ENSG00000270754.1 NEK4P3 chr10 65054460 65055003 + processed_pseudogene KNOWN OTTHUMG00000184645.1 544 544 1 ENSG00000238765.1 RNA5SP57 chr1 148193716 148193838 + rRNA KNOWN NA 123 123 1 ENSG00000227173.1 MYL6P3 chr10 65169438 65169869 - processed_pseudogene KNOWN OTTHUMG00000018327.1 432 432 1 ENSG00000233724.1 RP11-252C24.2 chr10 65248032 65248792 - processed_pseudogene KNOWN OTTHUMG00000018328.1 761 761 1 ENSG00000235356.1 RP11-428G2.1 chr10 65313785 65314970 + lincRNA NOVEL OTTHUMG00000018329.1 1186 307 3 ENSG00000222197.2 AL592466.1 chr10 65324367 65324455 + miRNA NOVEL NA 89 89 1 ENSG00000228065.9 LINC01515 chr10 65570338 65768835 + lincRNA NOVEL OTTHUMG00000018330.10 198498 10045 67 ENSG00000253012.1 AC022538.1 chr10 65710060 65710144 + miRNA NOVEL NA 85 85 1 ENSG00000183230.15 CTNNA3 chr10 65912518 67696169 - protein_coding KNOWN OTTHUMG00000018334.7 1783652 11136 34 ENSG00000273360.1 RP11-210G22.1 chr10 66079243 66118326 + antisense NOVEL OTTHUMG00000186284.1 39084 559 5 ENSG00000274065.1 AC016819.1 chr10 66497277 66497380 - miRNA NOVEL NA 104 104 1 ENSG00000277056.1 RP11-65E10.1 chr10 66837457 66837704 + unprocessed_pseudogene KNOWN OTTHUMG00000187835.1 248 248 1 ENSG00000224335.2 RP11-301M17.2 chr1 148234273 148234489 + unprocessed_pseudogene KNOWN OTTHUMG00000040409.2 217 217 1 ENSG00000198739.9 LRRTM3 chr10 66926006 67099830 + protein_coding NOVEL OTTHUMG00000018332.2 173825 4650 9 ENSG00000225299.1 RP11-344A5.1 chr10 67052609 67055028 + antisense NOVEL OTTHUMG00000018331.1 2420 505 2 ENSG00000226448.1 RP11-93L14.1 chr10 67334123 67334882 + processed_pseudogene KNOWN OTTHUMG00000018333.1 760 760 1 ENSG00000276866.1 MIR7151 chr10 67403351 67403410 - miRNA KNOWN NA 60 60 1 ENSG00000213606.3 AKR1B10P1 chr10 67750284 67751225 + processed_pseudogene KNOWN OTTHUMG00000018335.1 942 942 1 ENSG00000225922.1 RP11-57G10.1 chr10 67793770 67794245 + processed_pseudogene KNOWN OTTHUMG00000018338.1 476 476 1 ENSG00000108176.13 DNAJC12 chr10 67796665 67838166 - protein_coding KNOWN OTTHUMG00000018339.4 41502 2121 23 ENSG00000212520.1 RNU6-1250P chr10 67808502 67808608 + snRNA KNOWN NA 107 107 1 ENSG00000239942.2 RN7SL394P chr10 67825310 67825600 - misc_RNA KNOWN NA 291 291 1 ENSG00000237141.1 DNAJC19P1 chr10 67833763 67834081 + processed_pseudogene KNOWN OTTHUMG00000018336.1 319 319 1 ENSG00000227700.1 RP11-301M17.1 chr1 148246169 148246685 + processed_pseudogene KNOWN OTTHUMG00000014091.1 517 517 1 ENSG00000272892.1 RP11-57G10.8 chr10 67849525 67850746 + lincRNA NOVEL OTTHUMG00000186404.1 1222 1222 1 ENSG00000252113.2 RNU6-523P chr10 67858818 67858871 - snRNA KNOWN NA 54 54 1 ENSG00000219932.6 RPL12P8 chr10 67874332 67874911 + processed_pseudogene KNOWN OTTHUMG00000018337.3 580 580 1 ENSG00000096717.10 SIRT1 chr10 67884669 67918390 + protein_coding KNOWN OTTHUMG00000018340.2 33722 4551 38 ENSG00000148634.14 HERC4 chr10 67921899 68075348 - protein_coding KNOWN OTTHUMG00000018343.5 153450 15847 178 ENSG00000226318.1 RP11-474D14.2 chr10 67960702 67961464 - processed_pseudogene KNOWN OTTHUMG00000018341.2 763 763 1 ENSG00000266467.2 RN7SL220P chr10 68007718 68008017 - misc_RNA KNOWN NA 300 300 1 ENSG00000236375.3 POU5F1P5 chr10 68010205 68010862 - processed_pseudogene KNOWN OTTHUMG00000018342.3 658 658 1 ENSG00000138347.14 MYPN chr10 68106117 68212017 + protein_coding KNOWN OTTHUMG00000018344.1 105901 7060 93 ENSG00000222371.1 RN7SKP202 chr10 68158079 68158408 + misc_RNA KNOWN NA 330 330 1 ENSG00000199879.1 RNU1-120P chr1 148263476 148263632 + snRNA KNOWN NA 157 157 1 ENSG00000179774.8 ATOH7 chr10 68230624 68232103 - protein_coding KNOWN OTTHUMG00000018346.1 1480 1480 1 ENSG00000233590.1 RP11-153K11.3 chr10 68233251 68242379 - lincRNA NOVEL OTTHUMG00000018345.1 9129 561 5 ENSG00000234102.1 KRT19P4 chr10 68260557 68261499 + processed_pseudogene KNOWN OTTHUMG00000018347.1 943 943 1 ENSG00000108187.14 PBLD chr10 68282660 68333049 - protein_coding KNOWN OTTHUMG00000073949.4 50390 5172 48 ENSG00000096746.16 HNRNPH3 chr10 68331174 68343191 + protein_coding KNOWN OTTHUMG00000018349.2 12018 5373 72 ENSG00000204130.11 RUFY2 chr10 68341107 68407294 - protein_coding KNOWN OTTHUMG00000018353.6 66188 8137 121 ENSG00000138346.13 DNA2 chr10 68414064 68472121 - protein_coding KNOWN OTTHUMG00000018352.5 58058 4867 97 ENSG00000234806.1 RP11-9E13.4 chr10 68424560 68424997 + processed_pseudogene KNOWN OTTHUMG00000018351.1 438 438 1 ENSG00000199638.1 RNA5SP319 chr10 68461407 68461525 + rRNA KNOWN NA 119 119 1 ENSG00000122912.13 SLC25A16 chr10 68477999 68527474 - protein_coding KNOWN OTTHUMG00000018354.2 49476 7815 40 ENSG00000234283.1 RP11-495P10.6 chr1 148271884 148280749 - lincRNA NOVEL OTTHUMG00000014090.1 8866 420 3 ENSG00000226493.1 RP11-524O24.2 chr10 68499532 68499968 + processed_pseudogene KNOWN OTTHUMG00000018355.1 437 437 1 ENSG00000207438.1 Y_RNA chr10 68503152 68503259 + misc_RNA NOVEL NA 108 108 1 ENSG00000214881.4 TMEM14D chr10 68544489 68544833 - processed_pseudogene KNOWN OTTHUMG00000018356.1 345 345 1 ENSG00000138336.8 TET1 chr10 68560656 68694482 + protein_coding KNOWN OTTHUMG00000018359.1 133827 9288 12 ENSG00000213025.2 COX20P1 chr10 68632371 68632727 + processed_pseudogene KNOWN OTTHUMG00000018360.1 357 357 1 ENSG00000227583.1 RP11-119F7.3 chr10 68674356 68675100 + processed_pseudogene KNOWN OTTHUMG00000018357.1 745 745 1 ENSG00000260400.1 RP11-119F7.5 chr10 68698500 68700794 + sense_overlapping NOVEL OTTHUMG00000176181.1 2295 2295 1 ENSG00000270494.1 RP11-119F7.6 chr10 68717311 68717795 - processed_pseudogene KNOWN OTTHUMG00000184695.1 485 250 2 ENSG00000060339.12 CCAR1 chr10 68721012 68792377 + protein_coding KNOWN OTTHUMG00000018361.4 71366 6059 224 ENSG00000195401.2 Y_RNA chr10 68735720 68735823 - misc_RNA NOVEL NA 104 104 1 ENSG00000228626.1 RP11-495P10.9 chr1 148288001 148288951 - unprocessed_pseudogene KNOWN OTTHUMG00000014083.2 951 285 2 ENSG00000221184.1 MIR1254-1 chr10 68759318 68759414 + miRNA KNOWN NA 97 97 1 ENSG00000165730.13 STOX1 chr10 68827541 68895432 + protein_coding KNOWN OTTHUMG00000018367.7 67892 3568 16 ENSG00000200218.1 RNU6-697P chr10 68846805 68846911 + snRNA KNOWN NA 107 107 1 ENSG00000107625.11 DDX50 chr10 68901278 68946847 + protein_coding KNOWN OTTHUMG00000018362.2 45570 2692 61 ENSG00000206855.1 RNU6-571P chr10 68911653 68911759 - snRNA KNOWN NA 107 107 1 ENSG00000165732.11 DDX21 chr10 68956128 68985073 + protein_coding KNOWN OTTHUMG00000018366.1 28946 5020 30 ENSG00000198954.5 KIAA1279 chr10 68988721 69016982 + protein_coding KNOWN OTTHUMG00000018363.3 28262 3054 25 ENSG00000214875.2 MED28P1 chr10 68991137 68991707 + processed_pseudogene KNOWN OTTHUMG00000018364.1 571 571 1 ENSG00000229001.1 ACTBP14 chr10 69022778 69023866 + processed_pseudogene KNOWN OTTHUMG00000018365.1 1089 1089 1 ENSG00000122862.4 SRGN chr10 69088106 69104811 + protein_coding KNOWN OTTHUMG00000018369.1 16706 1220 5 ENSG00000231196.3 RP11-495P10.8 chr1 148290890 148295859 - lincRNA NOVEL OTTHUMG00000014082.3 4970 657 3 ENSG00000274008.1 Metazoa_SRP chr10 69098496 69098794 + misc_RNA NOVEL NA 299 299 1 ENSG00000122958.13 VPS26A chr10 69123512 69172861 + protein_coding KNOWN OTTHUMG00000018376.2 49350 3565 60 ENSG00000233163.1 RP11-259F16.3 chr10 69161530 69161906 - processed_pseudogene KNOWN OTTHUMG00000018368.1 377 377 1 ENSG00000156502.12 SUPV3L1 chr10 69180232 69209099 + protein_coding KNOWN OTTHUMG00000018375.2 28868 4283 47 ENSG00000229261.1 RP11-227H15.4 chr10 69215333 69232490 - antisense NOVEL OTTHUMG00000018372.1 17158 1933 5 ENSG00000156510.12 HKDC1 chr10 69220303 69267559 + protein_coding KNOWN OTTHUMG00000018371.2 47257 4259 22 ENSG00000231748.1 RP11-227H15.5 chr10 69265342 69268148 - antisense NOVEL OTTHUMG00000018373.1 2807 434 2 ENSG00000156515.20 HK1 chr10 69269984 69401882 + protein_coding KNOWN OTTHUMG00000018380.4 131899 6073 163 ENSG00000229197.1 RP11-227H15.7 chr10 69300432 69300817 - processed_pseudogene KNOWN OTTHUMG00000018374.1 386 386 1 ENSG00000221774.1 AC016821.1 chr10 69363555 69363641 - miRNA NOVEL NA 87 87 1 ENSG00000238107.1 RP11-495P10.5 chr1 148295180 148297556 + lincRNA NOVEL OTTHUMG00000014089.2 2377 1918 2 ENSG00000075073.13 TACR2 chr10 69403903 69416867 - protein_coding KNOWN OTTHUMG00000018377.1 12965 2871 14 ENSG00000232734.1 ATP5G1P7 chr10 69432972 69433371 - processed_pseudogene KNOWN OTTHUMG00000018379.1 400 400 1 ENSG00000099282.8 TSPAN15 chr10 69451473 69507669 + protein_coding KNOWN OTTHUMG00000018381.3 56197 2646 43 ENSG00000273530.1 AC016821.2 chr10 69458672 69458738 + miRNA NOVEL NA 67 67 1 ENSG00000233197.1 TMEM256P1 chr10 69523311 69523650 - processed_pseudogene KNOWN OTTHUMG00000018382.1 340 340 1 ENSG00000122859.4 NEUROG3 chr10 69571698 69573238 - protein_coding KNOWN OTTHUMG00000018391.1 1541 1376 2 ENSG00000236154.1 RP11-343J3.2 chr10 69575807 69577154 + antisense NOVEL OTTHUMG00000018384.1 1348 503 2 ENSG00000230755.1 RP11-343J3.7 chr10 69589880 69590355 - processed_pseudogene KNOWN OTTHUMG00000018390.1 476 476 1 ENSG00000235803.1 RP11-343J3.6 chr10 69590583 69591262 - processed_pseudogene KNOWN OTTHUMG00000018389.1 680 680 1 ENSG00000235524.1 RP11-343J3.5 chr10 69591406 69592931 - processed_pseudogene KNOWN OTTHUMG00000018387.1 1526 1526 1 ENSG00000230679.1 ENO1-AS1 chr1 8878835 8879894 + antisense NOVEL OTTHUMG00000001779.1 1060 456 2 ENSG00000244252.1 RP11-495P10.7 chr1 148295792 148297271 - lincRNA NOVEL OTTHUMG00000014092.1 1480 551 4 ENSG00000231152.1 MTND2P15 chr10 69594041 69594932 - processed_pseudogene KNOWN OTTHUMG00000018386.1 892 892 1 ENSG00000226794.1 MTND1P20 chr10 69595487 69596436 - processed_pseudogene KNOWN OTTHUMG00000018385.1 950 950 1 ENSG00000171224.8 C10orf35 chr10 69630251 69633599 + protein_coding KNOWN OTTHUMG00000018383.2 3349 1349 11 ENSG00000235645.2 RP11-242G20.1 chr10 69684899 69692452 + lincRNA NOVEL OTTHUMG00000018393.2 7554 576 4 ENSG00000230469.1 RPL5P26 chr10 69778962 69779838 + processed_pseudogene KNOWN OTTHUMG00000018392.1 877 877 1 ENSG00000197467.12 COL13A1 chr10 69801931 69964275 + protein_coding KNOWN OTTHUMG00000018394.3 162345 5761 371 ENSG00000266082.1 AL138925.1 chr10 69859214 69859299 - miRNA NOVEL NA 86 86 1 ENSG00000224222.1 RP11-262I2.2 chr10 69994626 70007836 - lincRNA NOVEL OTTHUMG00000018395.1 13211 524 3 ENSG00000099284.12 H2AFY2 chr10 70052796 70112280 + protein_coding KNOWN OTTHUMG00000018396.2 59485 1980 16 ENSG00000042286.13 AIFM2 chr10 70098223 70132934 - protein_coding KNOWN OTTHUMG00000018398.2 34712 5135 31 ENSG00000235988.1 RP11-495P10.4 chr1 148317683 148318013 - processed_pseudogene KNOWN OTTHUMG00000014088.2 331 331 1 ENSG00000156521.12 TYSND1 chr10 70137981 70146676 - protein_coding KNOWN OTTHUMG00000018397.1 8696 4597 13 ENSG00000079332.13 SAR1A chr10 70147289 70170523 - protein_coding KNOWN OTTHUMG00000018400.3 23235 6914 44 ENSG00000229097.1 CALM2P2 chr10 70163685 70164124 + processed_pseudogene KNOWN OTTHUMG00000018401.1 440 440 1 ENSG00000232142.1 RP11-367H5.8 chr10 70198988 70199239 - processed_pseudogene KNOWN OTTHUMG00000018403.1 252 252 1 ENSG00000180817.10 PPA1 chr10 70202830 70233911 - protein_coding KNOWN OTTHUMG00000018399.2 31082 5171 34 ENSG00000148734.7 NPFFR1 chr10 70247329 70283676 - protein_coding KNOWN OTTHUMG00000018404.2 36348 8921 4 ENSG00000172731.12 LRRC20 chr10 70298970 70382650 - protein_coding KNOWN OTTHUMG00000018407.2 83681 3625 31 ENSG00000224725.3 CEP57L1P1 chr10 70389426 70390626 + processed_pseudogene KNOWN OTTHUMG00000018406.1 1201 1201 1 ENSG00000148730.6 EIF4EBP2 chr10 70404379 70428618 + protein_coding KNOWN OTTHUMG00000018409.1 24240 7257 3 ENSG00000156574.8 NODAL chr10 70432315 70447951 - protein_coding KNOWN OTTHUMG00000018408.1 15637 1693 6 ENSG00000224481.1 RP11-495P10.3 chr1 148328999 148344636 + lincRNA NOVEL OTTHUMG00000014087.1 15638 1331 3 ENSG00000280401.1 RP11-104F15.9 chr10 70434829 70436556 + TEC KNOWN OTTHUMG00000187419.1 1728 1728 1 ENSG00000107719.8 PALD1 chr10 70478821 70568449 + protein_coding KNOWN OTTHUMG00000018411.2 89629 4555 20 ENSG00000230661.1 YY1P1 chr10 70485336 70486325 - processed_pseudogene KNOWN OTTHUMG00000018405.1 990 668 2 ENSG00000180644.6 PRF1 chr10 70597348 70602775 - protein_coding KNOWN OTTHUMG00000018412.2 5428 2534 6 ENSG00000138316.9 ADAMTS14 chr10 70672803 70762441 + protein_coding KNOWN OTTHUMG00000018414.1 89639 5269 44 ENSG00000166220.11 TBATA chr10 70771239 70785401 - protein_coding KNOWN OTTHUMG00000018413.1 14163 1717 24 ENSG00000231366.1 RP11-399N22.3 chr10 70794230 70794523 - processed_pseudogene KNOWN OTTHUMG00000018415.1 294 294 1 ENSG00000166224.15 SGPL1 chr10 70815961 70881173 + protein_coding KNOWN OTTHUMG00000018421.2 65213 7486 44 ENSG00000166228.7 PCBD1 chr10 70882280 70888784 - protein_coding KNOWN OTTHUMG00000018417.1 6505 1614 11 ENSG00000271409.1 RP11-432J9.3 chr10 70929925 70932057 + lincRNA NOVEL OTTHUMG00000018418.1 2133 1963 2 ENSG00000252744.1 Y_RNA chr1 148330271 148330394 + misc_RNA NOVEL NA 124 124 1 ENSG00000259267.2 RP11-432J9.6 chr10 70939053 70955641 + lincRNA NOVEL OTTHUMG00000172020.2 16589 895 5 ENSG00000107731.11 UNC5B chr10 71212570 71302864 + protein_coding KNOWN OTTHUMG00000018422.1 90295 6841 33 ENSG00000237512.5 UNC5B-AS1 chr10 71217224 71218228 - antisense NOVEL OTTHUMG00000018423.2 1005 707 4 ENSG00000198246.7 SLC29A3 chr10 71319258 71363385 + protein_coding KNOWN OTTHUMG00000018424.1 44128 2684 11 ENSG00000279406.1 RP11-327E2.5 chr10 71364243 71366374 + TEC KNOWN OTTHUMG00000176183.1 2132 2132 1 ENSG00000107736.18 CDH23 chr10 71396934 71815947 + protein_coding KNOWN OTTHUMG00000019347.8 419014 18059 373 ENSG00000223817.1 CDH23-AS1 chr10 71508153 71511873 - antisense NOVEL OTTHUMG00000018425.1 3721 378 3 ENSG00000214688.4 C10orf105 chr10 71711701 71737824 - protein_coding KNOWN OTTHUMG00000018427.2 26124 4934 4 ENSG00000107738.18 C10orf54 chr10 71747559 71773498 - protein_coding KNOWN OTTHUMG00000018426.3 25940 5128 14 ENSG00000274824.1 MIR7152 chr10 71790747 71790800 + miRNA KNOWN NA 54 54 1 ENSG00000202408.2 RNU1-122P chr1 148334612 148334767 - snRNA KNOWN NA 156 156 1 ENSG00000197746.12 PSAP chr10 71816298 71851369 - protein_coding KNOWN OTTHUMG00000018429.3 35072 3224 42 ENSG00000238446.1 RNU7-38P chr10 71844735 71844794 - snRNA KNOWN NA 60 60 1 ENSG00000230526.1 RP11-472G21.2 chr10 71878356 71879107 + lincRNA NOVEL OTTHUMG00000018428.1 752 525 2 ENSG00000278651.1 AC073370.1 chr10 71894311 71894411 - miRNA NOVEL NA 101 101 1 ENSG00000122863.5 CHST3 chr10 71964365 72013564 + protein_coding KNOWN OTTHUMG00000018431.1 49200 6970 3 ENSG00000272988.1 RP11-150D20.5 chr10 72053294 72054037 - lincRNA NOVEL OTTHUMG00000186410.1 744 744 1 ENSG00000107742.11 SPOCK2 chr10 72059035 72089032 - protein_coding KNOWN OTTHUMG00000018430.3 29998 6569 60 ENSG00000138303.16 ASCC1 chr10 72096032 72217134 - protein_coding KNOWN OTTHUMG00000018434.3 121103 5586 122 ENSG00000200294.1 SNORA36 chr10 72180858 72180989 + snoRNA NOVEL NA 132 132 1 ENSG00000226701.1 RP11-570G20.1 chr10 72189941 72190576 + processed_pseudogene KNOWN OTTHUMG00000018432.1 636 636 1 ENSG00000272824.1 RP6-74O6.6 chr1 148358245 148358686 - lincRNA NOVEL OTTHUMG00000186413.1 442 442 1 ENSG00000166295.7 ANAPC16 chr10 72216000 72235860 + protein_coding KNOWN OTTHUMG00000018433.3 19861 4324 18 ENSG00000200170.1 Y_RNA chr10 72220752 72220852 + misc_RNA NOVEL NA 101 101 1 ENSG00000168209.4 DDIT4 chr10 72273920 72276036 + protein_coding KNOWN OTTHUMG00000183961.1 2117 2058 7 ENSG00000269926.1 RP11-442H21.2 chr10 72274915 72275980 - antisense NOVEL OTTHUMG00000018435.2 1066 847 2 ENSG00000148719.13 DNAJB12 chr10 72332830 72355230 - protein_coding KNOWN OTTHUMG00000018436.3 22401 5649 43 ENSG00000107745.15 MICU1 chr10 72367327 72626191 - protein_coding KNOWN OTTHUMG00000018437.8 258865 4313 79 ENSG00000202513.1 RNU6-805P chr10 72391964 72392069 + snRNA KNOWN NA 106 106 1 ENSG00000276531.1 RP11-205A8.3 chr10 72483245 72483812 + unprocessed_pseudogene KNOWN OTTHUMG00000187839.1 568 568 1 ENSG00000226163.1 RP11-167P22.3 chr10 72501746 72502956 + antisense NOVEL OTTHUMG00000018439.1 1211 162 2 ENSG00000230609.1 RP11-167P22.4 chr10 72560264 72560456 + processed_pseudogene KNOWN OTTHUMG00000018440.1 193 193 1 ENSG00000207340.1 RNVU1-10 chr1 148362370 148362533 - snRNA KNOWN NA 164 164 1 ENSG00000272536.2 Metazoa_SRP chr10 72582803 72583086 + misc_RNA NOVEL NA 284 284 1 ENSG00000231471.1 HMGN2P34 chr10 72636497 72636765 - processed_pseudogene KNOWN OTTHUMG00000018438.1 269 269 1 ENSG00000238215.1 RP11-167P22.5 chr10 72643011 72644650 + processed_pseudogene KNOWN OTTHUMG00000018441.1 1640 1300 2 ENSG00000201881.1 Y_RNA chr10 72654165 72654276 - misc_RNA NOVEL NA 112 112 1 ENSG00000156026.13 MCU chr10 72692131 72887694 + protein_coding KNOWN OTTHUMG00000018443.2 195564 4533 68 ENSG00000266719.1 MIR4676 chr10 72721029 72721100 + miRNA KNOWN NA 72 72 1 ENSG00000280166.1 RP11-354E23.3 chr10 72730557 72731175 + TEC KNOWN OTTHUMG00000184253.1 619 619 1 ENSG00000279502.1 RP11-354E23.4 chr10 72756398 72757016 + TEC KNOWN OTTHUMG00000184254.1 619 619 1 ENSG00000272627.1 RP11-354E23.5 chr10 72766560 72767052 + sense_intronic NOVEL OTTHUMG00000186414.1 493 493 1 ENSG00000138315.11 OIT3 chr10 72893581 72933033 + protein_coding KNOWN OTTHUMG00000018444.1 39453 2365 17 ENSG00000274020.1 LINC01138 chr1 148362995 148460150 - lincRNA KNOWN OTTHUMG00000185296.3 97156 3938 12 ENSG00000215086.2 NPM1P24 chr10 72917641 72918534 - processed_pseudogene KNOWN OTTHUMG00000018445.1 894 894 1 ENSG00000138308.5 PLA2G12B chr10 72935170 72954778 - protein_coding KNOWN OTTHUMG00000018446.2 19609 1128 4 ENSG00000213700.3 RPL17P50 chr10 73005833 73006595 - processed_pseudogene KNOWN OTTHUMG00000018448.1 763 546 2 ENSG00000122884.11 P4HA1 chr10 73007217 73096974 - protein_coding KNOWN OTTHUMG00000018449.3 89758 3093 78 ENSG00000232646.1 RP11-344N10.4 chr10 73065126 73065467 + processed_pseudogene KNOWN OTTHUMG00000018450.1 342 214 3 ENSG00000237768.2 RP11-344N10.2 chr10 73071295 73074008 + antisense NOVEL OTTHUMG00000018447.2 2714 291 2 ENSG00000201047.1 Y_RNA chr10 73082494 73082595 - misc_RNA NOVEL NA 102 102 1 ENSG00000272630.1 RP11-344N10.5 chr10 73098044 73101297 - lincRNA NOVEL OTTHUMG00000186419.1 3254 3005 2 ENSG00000166321.12 NUDT13 chr10 73110375 73131828 + protein_coding KNOWN OTTHUMG00000018453.2 21454 2521 63 ENSG00000272599.2 RP11-152N13.16 chr10 73124573 73125532 - antisense NOVEL OTTHUMG00000186420.1 960 960 2 ENSG00000252135.1 RNVU1-2 chr1 148385829 148385963 - snRNA KNOWN NA 135 135 1 ENSG00000221164.1 SNORA11 chr10 73126080 73126207 - snoRNA NOVEL NA 128 128 1 ENSG00000122882.9 ECD chr10 73130155 73169055 - protein_coding KNOWN OTTHUMG00000018451.5 38901 3687 72 ENSG00000138286.13 FAM149B1 chr10 73168166 73244504 + protein_coding KNOWN OTTHUMG00000067794.2 76339 7473 49 ENSG00000213551.4 DNAJC9 chr10 73183362 73248862 - protein_coding KNOWN OTTHUMG00000018461.1 65501 3955 13 ENSG00000199201.1 Y_RNA chr10 73192223 73192325 - misc_RNA NOVEL NA 103 103 1 ENSG00000227382.1 EIF4A2P2 chr10 73199826 73201225 + processed_pseudogene KNOWN OTTHUMG00000018452.1 1400 1070 2 ENSG00000236756.4 DNAJC9-AS1 chr10 73247360 73276984 + antisense KNOWN OTTHUMG00000018460.3 29625 3260 6 ENSG00000182180.12 MRPS16 chr10 73248843 73252693 - protein_coding KNOWN OTTHUMG00000018454.1 3851 2794 15 ENSG00000227540.1 RP11-152N13.5 chr10 73252791 73254349 + antisense NOVEL OTTHUMG00000018458.1 1559 940 7 ENSG00000156042.16 CFAP70 chr10 73253759 73358859 - protein_coding KNOWN OTTHUMG00000018459.2 105101 7428 130 ENSG00000278596.1 MIR6077 chr1 148388282 148388363 + miRNA KNOWN NA 82 82 1 ENSG00000200356.1 RNU6-833P chr10 73279062 73279168 + snRNA KNOWN NA 107 107 1 ENSG00000207473.1 Y_RNA chr10 73346936 73347048 + misc_RNA NOVEL NA 113 113 1 ENSG00000138279.14 ANXA7 chr10 73375101 73414076 - protein_coding KNOWN OTTHUMG00000018463.4 38976 2862 43 ENSG00000233144.1 RP11-537A6.9 chr10 73381433 73383496 + antisense NOVEL OTTHUMG00000018462.1 2064 401 2 ENSG00000229659.1 RP11-345K20.2 chr10 73422259 73422696 - processed_pseudogene KNOWN OTTHUMG00000018465.1 438 438 1 ENSG00000166343.8 MSS51 chr10 73423579 73433561 - protein_coding KNOWN OTTHUMG00000018464.5 9983 2423 20 ENSG00000266344.1 AL353731.1 chr10 73428667 73428736 + miRNA NOVEL NA 70 70 1 ENSG00000107758.14 PPP3CB chr10 73436428 73496024 - protein_coding KNOWN OTTHUMG00000018472.3 59597 5094 65 ENSG00000221817.8 PPP3CB-AS1 chr10 73495525 73520070 + processed_transcript NOVEL OTTHUMG00000018470.6 24546 5687 56 ENSG00000166348.16 USP54 chr10 73497538 73625953 - protein_coding KNOWN OTTHUMG00000018469.7 128416 9498 164 ENSG00000201725.1 RNU6-304P chr1 8883427 8883533 - snRNA KNOWN NA 107 107 1 ENSG00000238825.1 RNU1-13P chr1 148388490 148388651 - snRNA KNOWN NA 162 162 1 ENSG00000207327.1 RNU6-883P chr10 73529051 73529157 - snRNA KNOWN NA 107 107 1 ENSG00000237139.1 RP11-137L10.5 chr10 73537803 73538391 + processed_pseudogene KNOWN OTTHUMG00000018468.1 589 284 2 ENSG00000268584.1 RP11-464F9.20 chr10 73625996 73626790 + antisense NOVEL OTTHUMG00000182569.1 795 795 1 ENSG00000272791.1 RP11-464F9.22 chr10 73630556 73631490 + lincRNA NOVEL OTTHUMG00000186447.1 935 935 1 ENSG00000177791.11 MYOZ1 chr10 73631654 73641757 - protein_coding KNOWN OTTHUMG00000018466.1 10104 1541 6 ENSG00000166317.10 SYNPO2L chr10 73644881 73663803 - protein_coding KNOWN OTTHUMG00000018471.5 18923 5147 9 ENSG00000271848.1 RP11-464F9.21 chr10 73654039 73674719 + antisense NOVEL OTTHUMG00000185405.1 20681 805 5 ENSG00000172650.11 AGAP5 chr10 73674285 73698159 - protein_coding KNOWN OTTHUMG00000018473.3 23875 3115 37 ENSG00000242288.9 RP11-464F9.1 chr10 73674295 73730466 - processed_transcript NOVEL OTTHUMG00000185467.1 56172 3810 19 ENSG00000271816.1 BMS1P4 chr10 73699151 73730487 - processed_transcript NOVEL OTTHUMG00000018474.3 31337 1913 12 ENSG00000201183.1 RNVU1-3 chr1 148402715 148402875 + snRNA KNOWN NA 161 161 1 ENSG00000272140.2 RP11-574K11.29 chr10 73703735 73713581 - lincRNA NOVEL OTTHUMG00000185468.2 9847 1192 5 ENSG00000252072.1 RNA5SP320 chr10 73706490 73706613 + rRNA KNOWN NA 124 124 1 ENSG00000242338.5 BMS1P4 chr10 73715843 73730469 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000018478.2 14627 1982 19 ENSG00000250959.2 GLUD1P3 chr10 73730562 73737311 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000018477.2 6750 1028 5 ENSG00000235316.1 DUSP8P5 chr10 73731824 73733638 + processed_pseudogene KNOWN OTTHUMG00000018485.1 1815 1815 1 ENSG00000270808.1 RP11-574K11.27 chr10 73740538 73740823 - processed_pseudogene KNOWN OTTHUMG00000184747.1 286 286 1 ENSG00000279088.1 RP11-574K11.24 chr10 73742995 73744230 - TEC KNOWN OTTHUMG00000176185.1 1236 1236 1 ENSG00000176986.13 SEC24C chr10 73744384 73772161 + protein_coding KNOWN OTTHUMG00000018476.3 27778 5272 78 ENSG00000279689.1 RP11-574K11.32 chr10 73769264 73772862 - TEC KNOWN OTTHUMG00000187421.1 3599 3599 1 ENSG00000196968.9 FUT11 chr10 73772291 73780251 + protein_coding KNOWN OTTHUMG00000018483.2 7961 4910 10 ENSG00000231551.5 RP11-495P10.1 chr1 148415197 148429361 + lincRNA NOVEL OTTHUMG00000014085.2 14165 1800 12 ENSG00000172586.7 CHCHD1 chr10 73782047 73783652 + protein_coding KNOWN OTTHUMG00000018475.1 1606 1483 5 ENSG00000214655.9 ZSWIM8 chr10 73785582 73801797 + protein_coding KNOWN OTTHUMG00000018486.5 16216 7953 273 ENSG00000280238.1 RP11-574K11.26 chr10 73791218 73791490 + TEC KNOWN OTTHUMG00000184284.1 273 273 1 ENSG00000272916.4 RP11-574K11.31 chr10 73796514 73811651 - protein_coding NOVEL OTTHUMG00000185992.1 15138 5818 21 ENSG00000272589.1 ZSWIM8-AS1 chr10 73796514 73801399 - antisense KNOWN OTTHUMG00000185986.2 4886 1460 4 ENSG00000166507.15 NDST2 chr10 73801911 73811798 - protein_coding KNOWN OTTHUMG00000018489.3 9888 4654 37 ENSG00000148660.19 CAMK2G chr10 73812501 73874591 - protein_coding KNOWN OTTHUMG00000018492.4 62091 6780 221 ENSG00000224195.1 RP11-574K11.5 chr10 73813518 73814737 + antisense NOVEL OTTHUMG00000018479.1 1220 445 2 ENSG00000229990.3 RP11-574K11.8 chr10 73841833 73847115 + antisense NOVEL OTTHUMG00000018480.3 5283 866 2 ENSG00000122861.14 PLAU chr10 73909177 73917497 + protein_coding KNOWN OTTHUMG00000018494.4 8321 2950 34 ENSG00000225871.2 RP11-495P10.10 chr1 148435105 148436926 + processed_pseudogene KNOWN OTTHUMG00000014084.3 1822 1679 2 ENSG00000222047.7 C10orf55 chr10 73909969 73922777 - protein_coding KNOWN OTTHUMG00000018496.1 12809 2514 9 ENSG00000035403.15 VCL chr10 73995193 74121363 + protein_coding KNOWN OTTHUMG00000018498.3 126171 9992 112 ENSG00000225761.1 RP11-417O11.5 chr10 74005137 74027915 + sense_intronic NOVEL OTTHUMG00000018491.1 22779 442 2 ENSG00000185009.11 AP3M1 chr10 74120255 74151063 - protein_coding KNOWN OTTHUMG00000018497.2 30809 5912 23 ENSG00000156110.12 ADK chr10 74151185 74709303 + protein_coding KNOWN OTTHUMG00000018506.2 558119 3184 48 ENSG00000236900.1 TIMM9P1 chr10 74344550 74344805 - processed_pseudogene KNOWN OTTHUMG00000018503.1 256 256 1 ENSG00000214629.3 RPSAP6 chr10 74371535 74372416 + processed_pseudogene KNOWN OTTHUMG00000018500.1 882 882 1 ENSG00000213731.2 RAB5CP1 chr10 74423435 74424014 - processed_pseudogene KNOWN OTTHUMG00000018501.1 580 580 1 ENSG00000232342.6 RP11-46O21.2 chr10 74506081 74530553 - antisense NOVEL OTTHUMG00000018505.4 24473 1230 11 ENSG00000226253.1 MRPL35P3 chr10 74527584 74527947 + processed_pseudogene KNOWN OTTHUMG00000018504.2 364 364 1 ENSG00000280649.1 AC245100.1 chr1 148458814 148459871 + protein_coding NOVEL NA 1058 1058 1 ENSG00000206756.1 Y_RNA chr10 74551392 74551493 + misc_RNA NOVEL NA 102 102 1 ENSG00000271710.1 RP11-312P12.3 chr10 74641410 74641776 - processed_pseudogene KNOWN OTTHUMG00000184746.1 367 367 1 ENSG00000214626.2 POLR3DP1 chr10 74654956 74656131 + processed_pseudogene KNOWN OTTHUMG00000018507.1 1176 1176 1 ENSG00000213525.3 RP11-383B24.3 chr10 74744386 74744707 - processed_pseudogene KNOWN OTTHUMG00000018508.1 322 322 1 ENSG00000272748.1 RP11-222G7.2 chr10 74821610 74822130 - lincRNA KNOWN OTTHUMG00000186424.1 521 521 1 ENSG00000156650.11 KAT6B chr10 74825582 75032622 + protein_coding KNOWN OTTHUMG00000018509.2 207041 13400 98 ENSG00000234149.1 RP11-77G23.2 chr10 75003055 75025174 - antisense KNOWN OTTHUMG00000018510.1 22120 189 2 ENSG00000227186.1 RP11-77G23.5 chr10 75023475 75024251 - antisense KNOWN OTTHUMG00000018511.1 777 380 2 ENSG00000188716.5 DUPD1 chr10 75037836 75058514 - protein_coding KNOWN OTTHUMG00000018512.2 20679 663 3 ENSG00000237882.1 PPIAP13 chr10 75089248 75089725 - processed_pseudogene KNOWN OTTHUMG00000018513.1 478 478 1 ENSG00000236334.2 PPIAL4G chr1 148479824 148483679 - protein_coding KNOWN OTTHUMG00000013629.2 3856 3856 1 ENSG00000079393.19 DUSP13 chr10 75094432 75109221 - protein_coding KNOWN OTTHUMG00000018516.9 14790 2351 79 ENSG00000156671.11 SAMD8 chr10 75099586 75182123 + protein_coding KNOWN OTTHUMG00000018515.3 82538 7316 21 ENSG00000232437.1 RP11-487I5.4 chr10 75125217 75125862 + processed_pseudogene KNOWN OTTHUMG00000018514.1 646 326 2 ENSG00000263626.1 AL392111.1 chr10 75184958 75185058 + miRNA NOVEL NA 101 101 1 ENSG00000165637.12 VDAC2 chr10 75210154 75231448 + protein_coding KNOWN OTTHUMG00000018517.5 21295 2827 105 ENSG00000165644.9 COMTD1 chr10 75233969 75236030 - protein_coding KNOWN OTTHUMG00000018518.2 2062 1580 33 ENSG00000227271.1 RPL39P25 chr10 75269392 75269545 - processed_pseudogene KNOWN OTTHUMG00000018520.1 154 154 1 ENSG00000226051.5 ZNF503-AS1 chr10 75269819 75373500 + lincRNA NOVEL OTTHUMG00000018524.2 103682 3272 27 ENSG00000233313.2 HMGA1P5 chr10 75276376 75276646 - processed_pseudogene KNOWN OTTHUMG00000018521.2 271 271 1 ENSG00000270087.4 RP11-399K21.11 chr10 75279726 75401246 - lincRNA NOVEL OTTHUMG00000184165.1 121521 564 8 ENSG00000274210.1 U1 chr1 148522601 148522765 + snRNA NOVEL NA 165 165 1 ENSG00000223428.1 RP11-399K21.5 chr10 75288333 75288682 - transcribed_processed_pseudogene KNOWN OTTHUMG00000018523.1 350 350 1 ENSG00000236797.1 SPA17P1 chr10 75382393 75382844 - transcribed_processed_pseudogene KNOWN OTTHUMG00000018525.1 452 452 1 ENSG00000165655.15 ZNF503 chr10 75397830 75401906 - protein_coding KNOWN OTTHUMG00000018526.2 4077 3347 6 ENSG00000237149.5 ZNF503-AS2 chr10 75401519 75408982 + antisense KNOWN OTTHUMG00000018528.4 7464 3348 12 ENSG00000273248.1 RP11-399K21.13 chr10 75408973 75409326 - lincRNA NOVEL OTTHUMG00000186430.1 354 354 1 ENSG00000272692.1 RP11-399K21.14 chr10 75409157 75411842 + lincRNA NOVEL OTTHUMG00000186431.1 2686 1890 3 ENSG00000236842.1 RP11-399K21.10 chr10 75430571 75431588 - antisense NOVEL OTTHUMG00000018527.1 1018 260 2 ENSG00000148655.13 C10orf11 chr10 75431453 76560167 + protein_coding KNOWN OTTHUMG00000018532.4 1128715 6560 55 ENSG00000279814.1 RP11-399K21.12 chr10 75450081 75451725 + TEC KNOWN OTTHUMG00000183089.1 1645 1645 1 ENSG00000207583.1 MIR606 chr10 75552458 75552553 + miRNA KNOWN NA 96 96 1 ENSG00000270629.4 NBPF14 chr1 148531385 148679751 - protein_coding KNOWN OTTHUMG00000188198.4 148367 12116 275 ENSG00000277338.1 AL589863.1 chr10 75568543 75568639 + miRNA NOVEL NA 97 97 1 ENSG00000268659.2 RP11-310J24.3 chr10 75642476 75643106 + sense_intronic NOVEL OTTHUMG00000183093.2 631 631 1 ENSG00000228280.1 RP11-367B6.2 chr10 75742740 75743755 + sense_intronic NOVEL OTTHUMG00000018529.1 1016 434 2 ENSG00000221232.1 AC012047.1 chr10 76127251 76127311 - miRNA NOVEL NA 61 61 1 ENSG00000265486.2 RN7SL518P chr10 76242022 76242301 - misc_RNA KNOWN NA 280 280 1 ENSG00000201954.1 RNU6-673P chr10 76260800 76260903 - snRNA KNOWN NA 104 104 1 ENSG00000278992.1 RP11-43N22.1 chr10 76270206 76270800 + TEC KNOWN OTTHUMG00000183095.1 595 595 1 ENSG00000281042.1 AC013286.1 chr10 76350749 76351228 - protein_coding NOVEL NA 480 48 2 ENSG00000230575.1 RP11-369F10.2 chr10 76437408 76438775 - antisense NOVEL OTTHUMG00000018530.1 1368 381 2 ENSG00000269256.1 RP11-325D15.2 chr10 76558350 76560994 - antisense NOVEL OTTHUMG00000183096.1 2645 592 2 ENSG00000252515.2 RNU6-1171P chr1 148739379 148739479 + snRNA KNOWN NA 101 101 1 ENSG00000277257.1 AC013738.1 chr10 76818713 76818778 - miRNA NOVEL NA 66 66 1 ENSG00000252888.1 SNORA31 chr10 76835377 76835502 - snoRNA NOVEL NA 126 126 1 ENSG00000224948.1 ATP5G1P8 chr10 76836568 76836861 + processed_pseudogene KNOWN OTTHUMG00000018533.1 294 294 1 ENSG00000156113.19 KCNMA1 chr10 76869601 77638595 - protein_coding KNOWN OTTHUMG00000018543.9 768995 19248 479 ENSG00000236467.6 KCNMA1-AS1 chr10 76888044 76980624 + antisense NOVEL OTTHUMG00000018534.6 92581 7061 30 ENSG00000225497.4 KCNMA1-AS2 chr10 77147652 77150100 + antisense NOVEL OTTHUMG00000018537.1 2449 457 4 ENSG00000224500.1 RP11-328K22.1 chr10 77313941 77315694 + antisense NOVEL OTTHUMG00000018538.1 1754 418 2 ENSG00000225652.1 KCNMA1-AS3 chr10 77354404 77376613 + antisense NOVEL OTTHUMG00000018539.1 22210 701 5 ENSG00000228092.1 COX6CP15 chr10 77433572 77433782 - processed_pseudogene KNOWN OTTHUMG00000018540.1 211 211 1 ENSG00000199592.1 RNA5SP321 chr10 77587049 77587159 + rRNA KNOWN NA 111 111 1 ENSG00000177144.6 NUDT4P1 chr1 148748953 148749498 + processed_pseudogene KNOWN OTTHUMG00000188673.1 546 546 1 ENSG00000213514.2 RP11-428P16.2 chr10 77730766 77734769 + processed_pseudogene KNOWN OTTHUMG00000018541.1 4004 3711 2 ENSG00000277981.1 RP11-428P16.3 chr10 77738246 77739015 + unprocessed_pseudogene KNOWN OTTHUMG00000187845.1 770 770 1 ENSG00000199664.1 RNU6-1266P chr10 77776951 77777055 - snRNA KNOWN NA 105 105 1 ENSG00000213513.3 RP13-39P12.2 chr10 77780337 77781876 - processed_pseudogene KNOWN OTTHUMG00000018544.1 1540 1540 1 ENSG00000228748.2 RP13-39P12.3 chr10 77782866 77793176 + antisense NOVEL OTTHUMG00000018545.2 10311 3532 4 ENSG00000151208.15 DLG5 chr10 77790791 77926526 - protein_coding KNOWN OTTHUMG00000018548.4 135736 10271 154 ENSG00000204049.1 RP11-126H7.4 chr10 77866875 77869610 + antisense NOVEL OTTHUMG00000187422.1 2736 1922 2 ENSG00000243446.3 RN7SL284P chr10 77912271 77912545 - misc_RNA KNOWN NA 275 275 1 ENSG00000281632.1 AL391421.1 chr10 77912280 77912362 - miRNA NOVEL NA 83 83 1 ENSG00000233871.1 DLG5-AS1 chr10 77927372 77929824 + antisense NOVEL OTTHUMG00000018547.1 2453 487 2 ENSG00000238249.2 HMGN2P17 chr1 8893409 8894151 + processed_pseudogene KNOWN OTTHUMG00000001781.1 743 743 1 ENSG00000275140.1 CH17-478G19.2 chr1 148772640 148784594 - unprocessed_pseudogene KNOWN OTTHUMG00000188674.1 11955 576 4 ENSG00000234612.1 H2AFZP5 chr10 77953495 77953876 + processed_pseudogene KNOWN OTTHUMG00000018546.1 382 382 1 ENSG00000274686.1 Metazoa_SRP chr10 77966173 77966440 + misc_RNA NOVEL NA 268 268 1 ENSG00000148606.11 POLR3A chr10 77969251 78029545 - protein_coding KNOWN OTTHUMG00000018550.2 60295 8917 55 ENSG00000138326.17 RPS24 chr10 78033760 78056812 + protein_coding KNOWN OTTHUMG00000018549.3 23053 4880 66 ENSG00000231957.2 GNAI2P2 chr10 78068623 78069538 - processed_pseudogene KNOWN OTTHUMG00000018597.2 916 916 1 ENSG00000230417.9 LINC00856 chr10 78238255 78675109 + lincRNA NOVEL OTTHUMG00000018555.4 436855 4509 18 ENSG00000227136.2 LINC00595 chr10 78267328 78330595 + lincRNA KNOWN OTTHUMG00000018552.2 63268 2298 10 ENSG00000229543.1 RP11-90J7.2 chr10 78293842 78301003 + lincRNA NOVEL OTTHUMG00000018553.1 7162 520 2 ENSG00000230229.1 RP11-90J7.4 chr10 78352597 78356100 + lincRNA NOVEL OTTHUMG00000018554.1 3504 381 2 ENSG00000201393.1 SNORA71 chr10 78367507 78367623 + snoRNA NOVEL NA 117 117 1 ENSG00000271546.1 RP4-725K1.1 chr1 148795797 148796325 + processed_pseudogene KNOWN OTTHUMG00000184361.1 529 529 1 ENSG00000228683.1 RP11-31E13.2 chr10 78696062 78697022 - lincRNA NOVEL OTTHUMG00000018556.1 961 579 2 ENSG00000224596.6 ZMIZ1-AS1 chr10 78943328 79067895 - antisense NOVEL OTTHUMG00000018559.2 124568 4427 19 ENSG00000229569.1 RP11-481G8.2 chr10 79000484 79003803 - lincRNA NOVEL OTTHUMG00000018558.1 3320 2018 2 ENSG00000108175.15 ZMIZ1 chr10 79069035 79316528 + protein_coding KNOWN OTTHUMG00000018560.2 247494 11048 60 ENSG00000108179.12 PPIF chr10 79347469 79355337 + protein_coding KNOWN OTTHUMG00000018562.4 7869 2674 25 ENSG00000165424.6 ZCCHC24 chr10 79382325 79445627 - protein_coding KNOWN OTTHUMG00000018561.1 63303 5051 8 ENSG00000235426.2 RP11-342M3.5 chr10 79382328 79409274 + antisense NOVEL OTTHUMG00000018564.2 26947 511 2 ENSG00000259021.2 TPRX1P1 chr10 79499666 79499984 - processed_pseudogene KNOWN OTTHUMG00000171166.2 319 319 1 ENSG00000241317.1 RP11-342M3.1 chr10 79504073 79506281 - lincRNA NOVEL OTTHUMG00000034448.1 2209 333 2 ENSG00000235705.5 RP11-342M3.2 chr10 79507597 79510922 - transcribed_processed_pseudogene KNOWN OTTHUMG00000034449.3 3326 726 6 ENSG00000178104.18 PDE4DIP chr1 148808181 149048286 + protein_coding KNOWN OTTHUMG00000013846.15 240106 27623 502 ENSG00000253626.3 EIF5AL1 chr10 79512601 79516440 + protein_coding KNOWN OTTHUMG00000018563.5 3840 3840 1 ENSG00000271985.1 RP11-589B3.7 chr10 79526508 79526631 - processed_pseudogene KNOWN OTTHUMG00000185654.1 124 124 1 ENSG00000232965.1 RPS12P18 chr10 79544087 79544356 + processed_pseudogene KNOWN OTTHUMG00000018567.2 270 270 1 ENSG00000185303.14 SFTPA2 chr10 79555852 79560397 - protein_coding KNOWN OTTHUMG00000018566.2 4546 2685 19 ENSG00000219430.2 MBL3P chr10 79582298 79584877 - unprocessed_pseudogene KNOWN OTTHUMG00000018569.1 2580 644 4 ENSG00000225827.1 SFTPA3P chr10 79595294 79595660 - processed_pseudogene KNOWN OTTHUMG00000018568.1 367 367 1 ENSG00000122852.13 SFTPA1 chr10 79610939 79615455 + protein_coding KNOWN OTTHUMG00000018565.4 4517 2451 30 ENSG00000226676.1 RP11-589B3.6 chr10 79628757 79632188 - lincRNA NOVEL OTTHUMG00000018570.1 3432 687 5 ENSG00000244733.5 RP11-506M13.3 chr10 79660891 79677996 + lincRNA NOVEL OTTHUMG00000018574.4 17106 1837 5 ENSG00000225484.5 NUTM2B-AS1 chr10 79663088 79826594 - antisense NOVEL OTTHUMG00000018585.2 163507 14755 56 ENSG00000252656.1 RN7SKP88 chr1 148839483 148839732 - misc_RNA KNOWN NA 250 250 1 ENSG00000272489.1 RP11-182L21.5 chr10 79663192 79664786 + sense_intronic NOVEL OTTHUMG00000185655.1 1595 1595 1 ENSG00000280355.1 RP11-119F19.5 chr10 79681973 79684094 - TEC KNOWN OTTHUMG00000185656.1 2122 2122 1 ENSG00000278616.1 BEND3P3 chr10 79682997 79685436 + processed_pseudogene KNOWN OTTHUMG00000187848.1 2440 2440 1 ENSG00000224886.2 RP11-119F19.4 chr10 79684494 79684983 - transcribed_processed_pseudogene KNOWN OTTHUMG00000018571.2 490 490 1 ENSG00000188199.9 NUTM2B chr10 79703227 79714681 + protein_coding KNOWN OTTHUMG00000018572.3 11455 5080 20 ENSG00000272447.1 RP11-182L21.6 chr10 79825902 79827602 + lincRNA NOVEL OTTHUMG00000185658.1 1701 1701 1 ENSG00000228570.6 NUTM2E chr10 79841358 79850878 + protein_coding KNOWN OTTHUMG00000018586.4 9521 3625 13 ENSG00000214695.3 NPAP1P2 chr10 79860573 79861806 + processed_pseudogene KNOWN OTTHUMG00000018588.1 1234 1234 1 ENSG00000204437.7 CTSLP6 chr10 79870375 79873903 - unprocessed_pseudogene KNOWN OTTHUMG00000018589.1 3529 1002 7 ENSG00000214584.3 PGGT1BP2 chr10 79892148 79893175 - processed_pseudogene KNOWN OTTHUMG00000018591.1 1028 1028 1 ENSG00000222788.1 RNU2-38P chr1 148939739 148939817 - snRNA KNOWN NA 79 79 1 ENSG00000242600.5 MBL1P chr10 79904898 79950336 + unitary_pseudogene KNOWN OTTHUMG00000018595.2 45439 2616 17 ENSG00000133661.14 SFTPD chr10 79937740 79982614 - protein_coding KNOWN OTTHUMG00000018590.4 44875 1321 14 ENSG00000273372.1 RP11-479O17.10 chr10 79968213 79973213 + lincRNA NOVEL OTTHUMG00000186448.1 5001 5001 1 ENSG00000280259.1 RP11-479O17.9 chr10 79970963 79973213 - TEC KNOWN OTTHUMG00000185659.1 2251 2251 1 ENSG00000235924.1 ZNRF2P3 chr10 79981839 79982212 + processed_pseudogene KNOWN OTTHUMG00000018593.1 374 374 1 ENSG00000225100.2 RP11-479O17.7 chr10 79982910 79983240 - processed_pseudogene KNOWN OTTHUMG00000018594.2 331 331 1 ENSG00000229616.2 RP11-369J21.11 chr10 80017713 80017911 - processed_pseudogene KNOWN OTTHUMG00000185660.1 199 199 1 ENSG00000224760.4 C1DP3 chr10 80024737 80025159 - processed_pseudogene KNOWN OTTHUMG00000018598.3 423 423 1 ENSG00000236217.4 C1DP2 chr10 80031968 80032393 - processed_pseudogene KNOWN OTTHUMG00000018599.2 426 426 1 ENSG00000227515.3 C1DP4 chr10 80040621 80041044 - processed_pseudogene KNOWN OTTHUMG00000018600.3 424 424 1 ENSG00000254913.1 RP4-791M13.5 chr1 149006309 149009527 - antisense NOVEL OTTHUMG00000165626.2 3219 406 3 ENSG00000230091.5 TMEM254-AS1 chr10 80046860 80078912 - antisense NOVEL OTTHUMG00000018601.2 32053 3138 15 ENSG00000133678.12 TMEM254 chr10 80078646 80092557 + protein_coding KNOWN OTTHUMG00000018602.1 13912 2996 60 ENSG00000279399.1 RP11-369J21.12 chr10 80091411 80091867 - TEC KNOWN OTTHUMG00000185664.1 457 457 1 ENSG00000230171.1 RPL22P18 chr10 80125941 80126317 + processed_pseudogene KNOWN OTTHUMG00000018603.1 377 377 1 ENSG00000189129.12 PLAC9 chr10 80131682 80145359 + protein_coding KNOWN OTTHUMG00000018596.2 13678 1240 13 ENSG00000122359.16 ANXA11 chr10 80150889 80205572 - protein_coding KNOWN OTTHUMG00000018604.2 54684 8513 84 ENSG00000280954.1 Metazoa_SRP chr10 80193746 80193982 - misc_RNA NOVEL NA 237 237 1 ENSG00000237523.1 LINC00857 chr10 80207710 80219657 + lincRNA NOVEL OTTHUMG00000018605.1 11948 2171 4 ENSG00000234319.1 RPS12P2 chr10 80215851 80216119 - processed_pseudogene KNOWN OTTHUMG00000018606.1 269 269 1 ENSG00000234382.2 RP11-40F6.1 chr10 80233664 80245367 + unprocessed_pseudogene KNOWN OTTHUMG00000018607.2 11704 629 5 ENSG00000266739.1 AC239802.1 chr1 149007077 149007142 - miRNA NOVEL NA 66 66 1 ENSG00000234743.1 EIF5AP4 chr10 80247219 80247683 - processed_pseudogene KNOWN OTTHUMG00000018608.1 465 465 1 ENSG00000279359.1 RP11-36D19.9 chr10 80249710 80254121 + TEC KNOWN OTTHUMG00000187436.1 4412 4412 1 ENSG00000151224.11 MAT1A chr10 80271820 80289684 - protein_coding KNOWN OTTHUMG00000018613.1 17865 3690 22 ENSG00000232950.1 ZNF519P1 chr10 80297720 80299655 + processed_pseudogene KNOWN OTTHUMG00000018611.1 1936 1626 2 ENSG00000235858.1 RP11-36D19.8 chr10 80333771 80334426 + lincRNA NOVEL OTTHUMG00000018612.1 656 339 2 ENSG00000170788.12 DYDC1 chr10 80336105 80356755 - protein_coding KNOWN OTTHUMG00000018609.1 20651 1237 31 ENSG00000133665.11 DYDC2 chr10 80344745 80368073 + protein_coding KNOWN OTTHUMG00000018610.2 23329 2465 32 ENSG00000122378.12 FAM213A chr10 80407829 80437115 + protein_coding KNOWN OTTHUMG00000018614.3 29287 6520 35 ENSG00000108219.13 TSPAN14 chr10 80454166 80533123 + protein_coding KNOWN OTTHUMG00000018615.3 78958 17888 77 ENSG00000226659.1 RP11-137H2.4 chr10 80529597 80535942 - antisense NOVEL OTTHUMG00000018616.1 6346 598 2 ENSG00000255148.2 RP4-791M13.4 chr1 149018671 149026269 - antisense NOVEL OTTHUMG00000165625.1 7599 554 3 ENSG00000178217.12 SH2D4B chr10 80537902 80646560 + protein_coding KNOWN OTTHUMG00000018617.4 108659 4363 19 ENSG00000231082.1 RP11-514F8.2 chr10 80649797 80653732 + lincRNA NOVEL OTTHUMG00000018618.1 3936 370 3 ENSG00000233353.1 RPS7P9 chr10 80716483 80717068 - processed_pseudogene KNOWN OTTHUMG00000018619.1 586 586 1 ENSG00000233703.1 RP11-20E23.1 chr10 80749632 80751231 - processed_pseudogene KNOWN OTTHUMG00000018620.1 1600 405 2 ENSG00000231060.1 FARSBP1 chr10 80776165 80778088 - processed_pseudogene KNOWN OTTHUMG00000018621.1 1924 1778 2 ENSG00000227209.1 WARS2P1 chr10 80940665 80941201 - processed_pseudogene KNOWN OTTHUMG00000018622.1 537 537 1 ENSG00000226466.2 RPA2P2 chr10 81136540 81137335 - processed_pseudogene KNOWN OTTHUMG00000018623.1 796 796 1 ENSG00000265990.1 AL356154.1 chr10 81144652 81144731 + miRNA NOVEL NA 80 80 1 ENSG00000185737.11 NRG3 chr10 81875314 82987179 + protein_coding KNOWN OTTHUMG00000018626.4 1111866 5072 88 ENSG00000221378.1 AL096864.1 chr10 82050262 82050348 + miRNA NOVEL NA 87 87 1 ENSG00000254539.1 RP4-791M13.3 chr1 149048576 149051273 + lincRNA NOVEL OTTHUMG00000165519.2 2698 869 2 ENSG00000229458.2 RP11-202D18.2 chr10 82224213 82229179 - antisense NOVEL OTTHUMG00000018625.2 4967 527 3 ENSG00000225738.2 NRG3-AS1 chr10 82228985 82232920 - processed_transcript KNOWN OTTHUMG00000018624.2 3936 813 8 ENSG00000207275.1 RNU6-441P chr10 82340771 82340876 + snRNA KNOWN NA 106 106 1 ENSG00000274635.1 AL354749.1 chr10 82864174 82864259 - miRNA NOVEL NA 86 86 1 ENSG00000200774.1 RNU6-478P chr10 83067962 83068071 - snRNA KNOWN NA 110 110 1 ENSG00000234931.1 MARK2P15 chr10 83311628 83314475 - processed_pseudogene KNOWN OTTHUMG00000018627.1 2848 2186 2 ENSG00000265268.1 AL356140.1 chr10 83437034 83437129 - miRNA NOVEL NA 96 96 1 ENSG00000233945.1 RP11-344L13.2 chr10 83672406 83675439 - lincRNA NOVEL OTTHUMG00000018629.1 3034 351 3 ENSG00000223565.1 RP11-344L13.1 chr10 83735506 83736493 + processed_pseudogene KNOWN OTTHUMG00000018628.1 988 988 1 ENSG00000212324.1 RNU6-129P chr10 83764358 83764464 + snRNA KNOWN NA 107 107 1 ENSG00000269713.6 NBPF9 chr1 149054027 149103561 - protein_coding KNOWN OTTHUMG00000013845.9 49535 9046 183 ENSG00000233258.1 RP11-219F10.1 chr10 83911654 83912922 - lincRNA NOVEL OTTHUMG00000018630.1 1269 309 2 ENSG00000200789.1 RNU1-65P chr10 84003332 84003479 + snRNA KNOWN NA 148 148 1 ENSG00000212769.5 HMGN2P8 chr10 84081429 84081995 + processed_pseudogene KNOWN OTTHUMG00000018631.2 567 268 2 ENSG00000271933.1 RP11-338I21.1 chr10 84138420 84140582 - antisense NOVEL OTTHUMG00000185666.1 2163 2163 1 ENSG00000165678.18 GHITM chr10 84139440 84153555 + protein_coding KNOWN OTTHUMG00000018637.2 14116 2438 19 ENSG00000188373.4 C10orf99 chr10 84173738 84185294 + protein_coding KNOWN OTTHUMG00000018635.1 11557 888 5 ENSG00000148600.13 CDHR1 chr10 84194635 84219621 + protein_coding KNOWN OTTHUMG00000018634.2 24987 7633 59 ENSG00000204033.8 LRIT2 chr10 84220495 84225589 - protein_coding KNOWN OTTHUMG00000018633.4 5095 3177 7 ENSG00000148602.5 LRIT1 chr10 84231593 84241461 - protein_coding KNOWN OTTHUMG00000018632.1 9869 2228 4 ENSG00000148604.12 RGR chr10 84245053 84259960 + protein_coding KNOWN OTTHUMG00000018636.1 14908 4256 48 ENSG00000232208.2 RP3-477M7.5 chr1 8907393 8907744 - processed_pseudogene KNOWN OTTHUMG00000001759.2 352 352 1 ENSG00000274019.1 CH17-78J1.1 chr1 149111304 149121866 - unprocessed_pseudogene KNOWN OTTHUMG00000188566.1 10563 522 3 ENSG00000229404.4 LINC00858 chr10 84279980 84294659 + lincRNA NOVEL OTTHUMG00000018638.1 14680 2879 9 ENSG00000107771.14 CCSER2 chr10 84328586 84518521 + protein_coding KNOWN OTTHUMG00000018641.2 189936 8424 68 ENSG00000233189.1 RPL12P29 chr10 84389170 84389626 - processed_pseudogene KNOWN OTTHUMG00000018639.1 457 457 1 ENSG00000225423.1 TNPO1P1 chr10 84390908 84392045 + processed_pseudogene KNOWN OTTHUMG00000018640.1 1138 1138 1 ENSG00000225928.2 CACYBPP1 chr10 84454679 84456056 - processed_pseudogene KNOWN OTTHUMG00000018643.2 1378 684 3 ENSG00000178429.9 RPS3AP5 chr10 84560443 84561263 + processed_pseudogene KNOWN OTTHUMG00000018642.2 821 821 1 ENSG00000238469.1 AC091487.1 chr10 84863265 84863362 + miRNA NOVEL NA 98 98 1 ENSG00000237267.1 LINC01519 chr10 85193421 85197958 - lincRNA NOVEL OTTHUMG00000018644.1 4538 2029 3 ENSG00000223993.1 RP11-475D12.1 chr10 85431943 85432515 - lincRNA NOVEL OTTHUMG00000018645.1 573 403 2 ENSG00000224504.2 RP11-475D12.2 chr10 85432863 85448961 + lincRNA NOVEL OTTHUMG00000018646.2 16099 2672 3 ENSG00000201699.1 RNU1-59P chr1 149162783 149162944 - snRNA KNOWN NA 162 162 1 ENSG00000230962.1 LINC01520 chr10 85449592 85491996 + lincRNA NOVEL OTTHUMG00000018647.1 42405 1487 6 ENSG00000279910.1 RP11-113E21.2 chr10 85526880 85531115 - TEC KNOWN OTTHUMG00000175690.1 4236 4236 1 ENSG00000223064.1 RNU6-325P chr10 85537379 85537483 + snRNA KNOWN NA 105 105 1 ENSG00000280134.1 RP11-113E21.3 chr10 85555484 85557436 - TEC KNOWN OTTHUMG00000176190.1 1953 1953 1 ENSG00000234942.2 GRID1-AS1 chr10 85577731 85607213 + antisense KNOWN OTTHUMG00000184154.2 29483 2100 8 ENSG00000182771.16 GRID1 chr10 85599555 86366493 - protein_coding KNOWN OTTHUMG00000018650.6 766939 5929 45 ENSG00000278333.1 uc_338 chr10 85613017 85613186 - misc_RNA NOVEL NA 170 170 1 ENSG00000270002.1 RP11-93H12.4 chr10 85644073 85648066 + antisense NOVEL OTTHUMG00000018648.2 3994 2619 2 ENSG00000252292.1 RN7SKP238 chr10 85650012 85650260 - misc_RNA KNOWN NA 249 249 1 ENSG00000236606.1 RP11-93H12.3 chr10 85708760 85709167 + processed_pseudogene KNOWN OTTHUMG00000018649.1 408 408 1 ENSG00000274265.3 CH17-189H20.1 chr1 149176022 149251013 + lincRNA NOVEL OTTHUMG00000188629.1 74992 1331 9 ENSG00000200487.1 RNA5SP322 chr10 86052448 86052566 + rRNA KNOWN NA 119 119 1 ENSG00000199104.2 MIR346 chr10 86264694 86264788 - miRNA KNOWN NA 95 95 1 ENSG00000238803.1 AL732479.1 chr10 86302826 86302921 - miRNA NOVEL NA 96 96 1 ENSG00000062650.16 WAPAL chr10 86435256 86521815 - protein_coding KNOWN OTTHUMG00000018651.2 86560 7280 77 ENSG00000212332.1 RNU6-780P chr10 86488446 86488549 + snRNA KNOWN NA 104 104 1 ENSG00000227896.2 RP11-77P6.2 chr10 86521945 86525101 + antisense NOVEL OTTHUMG00000018652.2 3157 3058 2 ENSG00000230507.5 RPL7AP8 chr10 86630825 86631628 - processed_pseudogene KNOWN OTTHUMG00000018653.1 804 804 1 ENSG00000122375.10 OPN4 chr10 86654557 86666848 + protein_coding KNOWN OTTHUMG00000018654.2 12292 2456 32 ENSG00000122367.18 LDB3 chr10 86668449 86736068 + protein_coding KNOWN OTTHUMG00000018655.7 67620 6676 88 ENSG00000272631.1 RP11-359E3.4 chr10 86749754 86756298 - antisense NOVEL OTTHUMG00000186453.1 6545 6545 1 ENSG00000215861.5 WI2-1896O14.1 chr1 149197992 149321732 - unprocessed_pseudogene KNOWN OTTHUMG00000078073.4 123741 933 7 ENSG00000281735.1 Clostridiales-1 chr10 86751611 86751772 - sRNA NOVEL NA 162 162 1 ENSG00000107779.10 BMPR1A chr10 86756650 86932838 + protein_coding KNOWN OTTHUMG00000018657.5 176189 11360 17 ENSG00000270874.1 RP11-420K10.1 chr10 86854696 86856236 - processed_pseudogene KNOWN OTTHUMG00000184745.1 1541 1168 3 ENSG00000200176.1 RNU1-19P chr10 86889569 86889733 + snRNA KNOWN NA 165 165 1 ENSG00000173269.12 MMRN2 chr10 86935540 86969481 - protein_coding KNOWN OTTHUMG00000018663.3 33942 5334 31 ENSG00000173267.12 SNCG chr10 86958618 86963260 + protein_coding KNOWN OTTHUMG00000018656.1 4643 1247 18 ENSG00000272734.1 ADIRF-AS1 chr10 86965345 86971311 - processed_transcript KNOWN OTTHUMG00000185998.2 5967 5748 9 ENSG00000148671.12 ADIRF chr10 86968192 86983934 + protein_coding KNOWN OTTHUMG00000018668.2 15743 998 9 ENSG00000273413.1 RP11-96C23.15 chr10 86970237 86970826 - antisense NOVEL OTTHUMG00000185999.1 590 465 2 ENSG00000271880.1 AGAP11 chr10 86970741 87010126 + processed_transcript NOVEL OTTHUMG00000185463.1 39386 3078 12 ENSG00000272755.1 RP11-326G21.1 chr1 149264252 149264816 + lincRNA NOVEL OTTHUMG00000186408.2 565 565 1 ENSG00000240089.2 BMS1P3 chr10 86992253 87000435 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000018662.1 8183 932 6 ENSG00000151303.11 RP11-96C23.13 chr10 86992406 87010203 + processed_transcript NOVEL OTTHUMG00000018667.2 17798 4560 7 ENSG00000272508.1 RP11-96C23.14 chr10 86993432 87024732 + processed_transcript NOVEL OTTHUMG00000185464.1 31301 1238 10 ENSG00000261011.1 RP11-96C23.11 chr10 87001636 87009905 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000176765.1 8270 1740 4 ENSG00000229969.1 RP11-96C23.10 chr10 87009785 87015782 - antisense NOVEL OTTHUMG00000018659.1 5998 234 2 ENSG00000188100.8 FAM25A chr10 87020306 87024730 + protein_coding KNOWN OTTHUMG00000018664.2 4425 345 3 ENSG00000271573.1 RP11-96C23.12 chr10 87027184 87027477 + processed_pseudogene KNOWN OTTHUMG00000184644.1 294 294 1 ENSG00000200253.1 RNU6-529P chr10 87041238 87041341 - snRNA KNOWN NA 104 104 1 ENSG00000148672.8 GLUD1 chr10 87050486 87094866 - protein_coding KNOWN OTTHUMG00000018666.1 44381 3519 21 ENSG00000122376.10 FAM35A chr10 87094161 87191468 + protein_coding KNOWN OTTHUMG00000018669.2 97308 4242 22 ENSG00000273591.1 7SK chr1 149290513 149290762 + misc_RNA NOVEL NA 250 250 1 ENSG00000237280.1 RP11-96C23.9 chr10 87113954 87115523 + sense_intronic NOVEL OTTHUMG00000018660.1 1570 688 2 ENSG00000273946.1 Metazoa_SRP chr10 87154041 87154369 - misc_RNA NOVEL NA 329 329 1 ENSG00000223482.6 NUTM2A-AS1 chr10 87203875 87342612 - antisense NOVEL OTTHUMG00000018671.2 138738 6851 55 ENSG00000184923.11 NUTM2A chr10 87225448 87236908 + protein_coding KNOWN OTTHUMG00000018670.3 11461 5082 14 ENSG00000224914.2 LINC00863 chr10 87342736 87357882 + lincRNA NOVEL OTTHUMG00000018673.2 15147 3287 5 ENSG00000214562.12 NUTM2D chr10 87357668 87370695 + protein_coding KNOWN OTTHUMG00000018672.3 13028 6985 24 ENSG00000237740.1 NPAP1P3 chr10 87376896 87378481 + processed_pseudogene KNOWN OTTHUMG00000018676.1 1586 1586 1 ENSG00000236417.2 CTSLP1 chr10 87386685 87390203 - unprocessed_pseudogene KNOWN OTTHUMG00000018677.1 3519 1002 7 ENSG00000228055.2 LINC00864 chr10 87397023 87424792 - lincRNA NOVEL OTTHUMG00000018674.2 27770 775 6 ENSG00000231569.1 RP11-399L7.3 chr10 87408044 87408258 - processed_pseudogene KNOWN OTTHUMG00000018675.1 215 215 1 ENSG00000274423.1 SEC22B chr1 149345661 149357612 + unprocessed_pseudogene KNOWN OTTHUMG00000013745.8 11952 573 4 ENSG00000107789.14 MINPP1 chr10 87504875 87553460 + protein_coding KNOWN OTTHUMG00000018678.1 48586 3016 16 ENSG00000223761.1 RP11-57C13.4 chr10 87591607 87606024 - lincRNA NOVEL OTTHUMG00000018680.1 14418 168 2 ENSG00000225913.2 RP11-57C13.6 chr10 87607985 87659279 + lincRNA NOVEL OTTHUMG00000018682.1 51295 495 4 ENSG00000196566.2 RP11-57C13.3 chr10 87610163 87660003 - antisense NOVEL OTTHUMG00000018679.1 49841 744 4 ENSG00000234192.1 RP11-57C13.5 chr10 87642607 87642954 + processed_pseudogene KNOWN OTTHUMG00000018681.1 348 348 1 ENSG00000198682.11 PAPSS2 chr10 87659613 87747705 + protein_coding KNOWN OTTHUMG00000018683.1 88093 4083 31 ENSG00000138138.12 ATAD1 chr10 87751512 87841343 - protein_coding KNOWN OTTHUMG00000018685.1 89832 5067 24 ENSG00000223820.5 CFL1P1 chr10 87817928 87845612 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000018684.5 27685 2695 9 ENSG00000243782.3 RN7SL78P chr10 87832818 87833098 - misc_RNA KNOWN NA 281 281 1 ENSG00000227268.3 KLLN chr10 87859161 87863437 - protein_coding KNOWN OTTHUMG00000186455.1 4277 4277 1 ENSG00000271383.5 NBPF19 chr1 149390623 149556361 + protein_coding KNOWN OTTHUMG00000013900.11 165739 18785 181 ENSG00000171862.8 PTEN chr10 87863113 87971930 + protein_coding KNOWN OTTHUMG00000018688.2 108818 11662 26 ENSG00000224745.1 RP11-380G5.2 chr10 87878692 87880427 + sense_intronic NOVEL OTTHUMG00000018686.1 1736 499 3 ENSG00000213613.2 RP11-380G5.3 chr10 87945502 87946024 + processed_pseudogene KNOWN OTTHUMG00000018687.1 523 523 1 ENSG00000200891.1 SNORD74 chr10 87994618 87994695 - snoRNA NOVEL NA 78 78 1 ENSG00000227905.1 MED6P1 chr10 88048135 88049823 - processed_pseudogene KNOWN OTTHUMG00000018689.1 1689 713 2 ENSG00000275015.1 RP11-129G17.2 chr10 88259129 88259372 - unprocessed_pseudogene KNOWN OTTHUMG00000187850.1 244 244 1 ENSG00000184719.10 RNLS chr10 88273864 88584530 - protein_coding KNOWN OTTHUMG00000018692.1 310667 3933 26 ENSG00000201548.1 Y_RNA chr10 88585638 88585733 - misc_RNA NOVEL NA 96 96 1 ENSG00000204022.8 LIPJ chr10 88586753 88606976 + protein_coding KNOWN OTTHUMG00000018691.2 20224 4528 18 ENSG00000237205.1 RPL7P34 chr10 88618223 88618934 - processed_pseudogene KNOWN OTTHUMG00000018690.1 712 712 1 ENSG00000263464.2 PPIAL4C chr1 149583865 149584464 + protein_coding KNOWN OTTHUMG00000188675.1 600 600 1 ENSG00000182333.13 LIPF chr10 88664441 88678814 + protein_coding KNOWN OTTHUMG00000018695.2 14374 2348 49 ENSG00000271408.1 RP11-186O14.7 chr10 88699683 88700401 + processed_pseudogene KNOWN OTTHUMG00000184643.1 719 719 1 ENSG00000204021.3 LIPK chr10 88724544 88752786 + protein_coding KNOWN OTTHUMG00000018693.2 28243 1230 9 ENSG00000226358.1 KRT8P38 chr10 88727485 88728914 + processed_pseudogene KNOWN OTTHUMG00000018697.1 1430 1430 1 ENSG00000204020.5 LIPN chr10 88761406 88778242 + protein_coding KNOWN OTTHUMG00000018694.2 16837 1197 9 ENSG00000235150.1 RCBTB2P1 chr10 88785600 88787061 - processed_pseudogene KNOWN OTTHUMG00000018696.1 1462 1462 1 ENSG00000173239.12 LIPM chr10 88802730 88820546 + protein_coding KNOWN OTTHUMG00000018698.3 17817 1511 18 ENSG00000152766.5 ANKRD22 chr10 88822132 88851818 - protein_coding KNOWN OTTHUMG00000018699.1 29687 1733 8 ENSG00000234256.2 PTCD2P2 chr10 88876450 88877544 + processed_pseudogene KNOWN OTTHUMG00000018704.2 1095 1095 1 ENSG00000138134.10 STAMBPL1 chr10 88879734 88975153 + protein_coding KNOWN OTTHUMG00000018702.1 95420 6323 43 ENSG00000277147.3 LINC00869 chr1 149606334 149679523 + lincRNA NOVEL OTTHUMG00000182426.4 73190 8501 37 ENSG00000180139.11 ACTA2-AS1 chr10 88932390 88940820 + antisense NOVEL OTTHUMG00000018703.6 8431 3183 11 ENSG00000107796.11 ACTA2 chr10 88935074 88991390 - protein_coding KNOWN OTTHUMG00000018700.2 56317 3027 39 ENSG00000026103.18 FAS chr10 88990531 89015785 + protein_coding KNOWN OTTHUMG00000018701.5 25255 3688 142 ENSG00000275693.1 FAS-AS1 chr10 88992370 88992539 + misc_RNA NOVEL NA 170 170 1 ENSG00000261438.1 RP11-399O19.9 chr10 89015836 89017059 + sense_overlapping NOVEL OTTHUMG00000186457.1 1224 1224 1 ENSG00000265375.1 MIR4679-1 chr10 89063335 89063411 - miRNA KNOWN NA 77 77 1 ENSG00000233292.1 RP11-341B24.3 chr10 89139044 89139458 + processed_pseudogene KNOWN OTTHUMG00000018706.1 415 415 1 ENSG00000138135.6 CH25H chr10 89205629 89207314 - protein_coding KNOWN OTTHUMG00000018705.1 1686 1686 1 ENSG00000107798.16 LIPA chr10 89213569 89414557 - protein_coding KNOWN OTTHUMG00000018716.2 200989 4910 50 ENSG00000266769.1 AL353751.1 chr10 89264340 89264406 - miRNA NOVEL NA 67 67 1 ENSG00000232663.2 RP3-477M7.6 chr1 8909742 8909904 + processed_pseudogene KNOWN OTTHUMG00000001761.2 163 163 1 ENSG00000275557.1 RP11-353N4.6 chr1 149607765 149612402 + lincRNA NOVEL OTTHUMG00000182668.3 4638 447 4 ENSG00000232110.6 RP11-149I23.3 chr10 89283765 89292125 + antisense NOVEL OTTHUMG00000018710.2 8361 1012 7 ENSG00000119922.8 IFIT2 chr10 89301955 89309276 + protein_coding KNOWN OTTHUMG00000018707.1 7322 3489 5 ENSG00000119917.12 IFIT3 chr10 89327894 89340971 + protein_coding KNOWN OTTHUMG00000018708.1 13078 2640 4 ENSG00000224289.1 IFIT6P chr10 89362294 89363487 + unprocessed_pseudogene KNOWN OTTHUMG00000018711.1 1194 1194 1 ENSG00000204010.3 IFIT1B chr10 89378056 89385205 + protein_coding KNOWN OTTHUMG00000018709.3 7150 1972 2 ENSG00000185745.9 IFIT1 chr10 89392546 89406486 + protein_coding KNOWN OTTHUMG00000018712.1 13941 4613 5 ENSG00000152778.8 IFIT5 chr10 89414586 89421001 + protein_coding KNOWN OTTHUMG00000018713.1 6416 4015 2 ENSG00000152779.13 SLC16A12 chr10 89430299 89556641 - protein_coding KNOWN OTTHUMG00000018714.4 126343 4835 11 ENSG00000234452.4 SLC16A12-AS1 chr10 89456064 89468140 + antisense NOVEL OTTHUMG00000018715.1 12077 690 6 ENSG00000152782.15 PANK1 chr10 89579497 89645572 - protein_coding KNOWN OTTHUMG00000018718.1 66076 7638 26 ENSG00000206828.1 U1 chr1 149636766 149636929 + snRNA NOVEL NA 164 164 1 ENSG00000198997.1 MIR107 chr10 89592743 89592829 - miRNA KNOWN NA 87 87 1 ENSG00000249962.1 RP11-80H5.5 chr10 89644603 89645223 - processed_pseudogene KNOWN OTTHUMG00000018721.1 621 621 1 ENSG00000232936.4 RP11-80H5.2 chr10 89645282 89650667 + antisense NOVEL OTTHUMG00000018719.1 5386 605 8 ENSG00000225836.1 RP11-80H5.6 chr10 89646289 89650822 - lincRNA NOVEL OTTHUMG00000018722.1 4534 368 2 ENSG00000235100.3 RP11-80H5.9 chr10 89667181 89699671 - lincRNA NOVEL OTTHUMG00000184077.1 32491 1298 3 ENSG00000240996.1 RP11-80H5.7 chr10 89694295 89697928 - lincRNA NOVEL OTTHUMG00000018723.1 3634 667 2 ENSG00000138182.13 KIF20B chr10 89701610 89774939 + protein_coding KNOWN OTTHUMG00000018725.1 73330 6851 92 ENSG00000232229.4 LINC00865 chr10 89829510 89840861 + lincRNA NOVEL OTTHUMG00000018726.1 11352 4272 7 ENSG00000270670.1 RP11-248C1.3 chr10 89837612 89839334 - processed_pseudogene KNOWN OTTHUMG00000184689.1 1723 1723 1 ENSG00000280560.1 LINC01374 chr10 89853906 89914948 + lincRNA KNOWN OTTHUMG00000189507.1 61043 415 2 ENSG00000234232.5 RP11-353N4.5 chr1 149677498 149747812 - lincRNA NOVEL OTTHUMG00000013955.5 70315 1367 13 ENSG00000226159.1 LINC01375 chr10 89915489 89957373 - lincRNA NOVEL OTTHUMG00000018728.1 41885 1860 4 ENSG00000228938.3 SNRPD2P1 chr10 89978717 89979070 + processed_pseudogene KNOWN OTTHUMG00000018727.1 354 354 1 ENSG00000274223.1 AL139340.1 chr10 90086269 90086336 + miRNA NOVEL NA 68 68 1 ENSG00000222451.1 RN7SKP143 chr10 90163651 90163960 - misc_RNA KNOWN NA 310 310 1 ENSG00000236373.1 RP11-15K3.1 chr10 90402521 90540805 - lincRNA NOVEL OTTHUMG00000018731.1 138285 981 7 ENSG00000224750.5 RP11-94M14.2 chr10 90454170 90502968 + lincRNA NOVEL OTTHUMG00000018729.1 48799 3425 9 ENSG00000238291.1 RP11-94M14.3 chr10 90462717 90467952 + lincRNA NOVEL OTTHUMG00000018730.1 5236 831 3 ENSG00000148680.14 HTR7 chr10 90740823 90857698 - protein_coding KNOWN OTTHUMG00000018732.1 116876 3131 10 ENSG00000148688.12 RPP30 chr10 90871716 90908553 + protein_coding KNOWN OTTHUMG00000018733.2 36838 4653 80 ENSG00000222305.1 Y_RNA chr10 90880040 90880179 - misc_RNA NOVEL NA 140 140 1 ENSG00000275229.1 U1 chr1 149700151 149700296 - snRNA NOVEL NA 146 146 1 ENSG00000148677.6 ANKRD1 chr10 90912096 90921276 - protein_coding KNOWN OTTHUMG00000018734.1 9181 1979 9 ENSG00000201604.1 RNU6-740P chr10 90922731 90922835 - snRNA KNOWN NA 105 105 1 ENSG00000225519.1 RP11-236B18.2 chr10 90994620 91006390 + lincRNA NOVEL OTTHUMG00000018736.1 11771 380 2 ENSG00000273124.1 RP11-236B18.5 chr10 90997480 90997713 - lincRNA NOVEL OTTHUMG00000186459.1 234 234 1 ENSG00000224851.1 LINC00502 chr10 91047166 91062159 + lincRNA NOVEL OTTHUMG00000018738.1 14994 445 3 ENSG00000220585.4 DDX18P6 chr10 91053051 91055047 + processed_pseudogene KNOWN OTTHUMG00000018735.1 1997 1997 1 ENSG00000234043.3 RP11-56M3.1 chr10 91152605 91153349 - processed_pseudogene KNOWN OTTHUMG00000018739.1 745 745 1 ENSG00000180628.13 PCGF5 chr10 91163012 91284331 + protein_coding KNOWN OTTHUMG00000018740.1 121320 8306 36 ENSG00000165338.15 HECTD2 chr10 91410285 91514829 + protein_coding KNOWN OTTHUMG00000018742.3 104545 11408 63 ENSG00000271385.1 RP11-108M11.3 chr10 91464578 91464708 - processed_pseudogene KNOWN OTTHUMG00000184687.1 131 131 1 ENSG00000272058.2 FAM231D chr1 149702328 149705721 + protein_coding KNOWN OTTHUMG00000188775.1 3394 3394 1 ENSG00000223876.1 RPS27P1 chr10 91544852 91545098 + processed_pseudogene KNOWN OTTHUMG00000018741.1 247 247 1 ENSG00000119938.8 PPP1R3C chr10 91628442 91633054 - protein_coding KNOWN OTTHUMG00000018745.1 4613 2524 2 ENSG00000213449.2 GAPDHP28 chr10 91666780 91667782 - processed_pseudogene KNOWN OTTHUMG00000018746.1 1003 1003 1 ENSG00000228759.1 FAF2P1 chr10 91765899 91767196 - processed_pseudogene KNOWN OTTHUMG00000018749.1 1298 1298 1 ENSG00000228701.1 TNKS2-AS1 chr10 91782839 91798291 - antisense NOVEL OTTHUMG00000018750.1 15453 761 4 ENSG00000107854.5 TNKS2 chr10 91798312 91865276 + protein_coding KNOWN OTTHUMG00000018747.1 66965 6157 27 ENSG00000180581.7 SRP9P1 chr10 91807179 91807439 - processed_pseudogene KNOWN OTTHUMG00000040029.1 261 261 1 ENSG00000273497.1 RP11-402D21.3 chr10 91896704 91896897 + unprocessed_pseudogene KNOWN OTTHUMG00000187854.1 194 194 1 ENSG00000174721.9 FGFBP3 chr10 91906589 91909483 - protein_coding KNOWN OTTHUMG00000018751.1 2895 2545 2 ENSG00000272817.1 RP11-402D21.2 chr10 91908131 91909348 + antisense NOVEL OTTHUMG00000186460.1 1218 571 2 ENSG00000263825.1 AC243772.1 chr1 149737309 149737400 - miRNA NOVEL NA 92 92 1 ENSG00000095564.12 BTAF1 chr10 91923769 92030325 + protein_coding KNOWN OTTHUMG00000018752.4 106557 7582 93 ENSG00000107864.13 CPEB3 chr10 92046692 92291087 - protein_coding KNOWN OTTHUMG00000018756.4 244396 7928 30 ENSG00000252993.1 SNORA25 chr10 92076242 92076365 + snoRNA NOVEL NA 124 124 1 ENSG00000214549.2 SDHCP2 chr10 92118664 92119164 + processed_pseudogene KNOWN OTTHUMG00000018753.1 501 501 1 ENSG00000213484.2 EIF4A1P8 chr10 92136875 92138370 + processed_pseudogene KNOWN OTTHUMG00000018754.1 1496 1190 2 ENSG00000264076.1 AL158040.1 chr10 92159572 92159672 + miRNA NOVEL NA 101 101 1 ENSG00000221042.1 CPEB3_ribozyme chr10 92204229 92204306 - ribozyme NOVEL NA 78 78 1 ENSG00000105988.6 NHP2P1 chr10 92216332 92216793 + processed_pseudogene KNOWN OTTHUMG00000018755.1 462 462 1 ENSG00000199881.1 Y_RNA chr10 92272147 92272250 - misc_RNA NOVEL NA 104 104 1 ENSG00000198060.8 MARCH5 chr10 92291163 92353964 + protein_coding KNOWN OTTHUMG00000018757.2 62802 4632 16 ENSG00000226500.2 RP11-196G18.1 chr1 149754301 149754710 - processed_pseudogene KNOWN OTTHUMG00000012088.3 410 410 1 ENSG00000202297.1 RNY3P12 chr10 92334463 92334564 + misc_RNA KNOWN NA 102 102 1 ENSG00000232709.1 MARK2P9 chr10 92418667 92420875 + processed_pseudogene KNOWN OTTHUMG00000018758.1 2209 1727 2 ENSG00000207895.1 AL161652.1 chr10 92441211 92441304 - miRNA NOVEL NA 94 94 1 ENSG00000119912.14 IDE chr10 92451684 92574076 - protein_coding KNOWN OTTHUMG00000018759.3 122393 7607 94 ENSG00000138160.5 KIF11 chr10 92593286 92655395 + protein_coding KNOWN OTTHUMG00000018761.2 62110 4860 22 ENSG00000184111.6 RP11-366I13.3 chr10 92596852 92597287 - processed_pseudogene KNOWN OTTHUMG00000018760.2 436 436 1 ENSG00000264313.2 RN7SL644P chr10 92659044 92659302 + misc_RNA KNOWN NA 259 259 1 ENSG00000236493.2 EIF2S2P3 chr10 92668745 92669743 - processed_pseudogene KNOWN OTTHUMG00000018763.3 999 999 1 ENSG00000152804.9 HHEX chr10 92689951 92695646 + protein_coding KNOWN OTTHUMG00000018762.3 5696 2525 13 ENSG00000201412.1 Y_RNA chr10 92710499 92710608 - misc_RNA NOVEL NA 110 110 1 ENSG00000150337.12 FCGR1A chr1 149782671 149792518 + protein_coding KNOWN OTTHUMG00000012089.4 9848 2998 14 ENSG00000138190.15 EXOC6 chr10 92834713 93059493 + protein_coding KNOWN OTTHUMG00000018767.5 224781 6193 86 ENSG00000225118.1 RP11-477L16.2 chr10 92878092 92878289 - processed_pseudogene KNOWN OTTHUMG00000018764.2 198 198 1 ENSG00000226425.1 RP11-348J12.2 chr10 93059663 93060426 - antisense NOVEL OTTHUMG00000018768.1 764 442 2 ENSG00000187553.7 CYP26C1 chr10 93060808 93069536 + protein_coding KNOWN OTTHUMG00000018766.3 8729 4364 12 ENSG00000279607.1 RP11-348J12.5 chr10 93071972 93073466 + lincRNA NOVEL OTTHUMG00000189113.1 1495 567 2 ENSG00000095596.10 CYP26A1 chr10 93073475 93077890 + protein_coding KNOWN OTTHUMG00000018765.4 4416 2972 28 ENSG00000232805.1 NIP7P1 chr10 93106872 93107383 - processed_pseudogene KNOWN OTTHUMG00000018769.1 512 512 1 ENSG00000237417.1 XRCC6P1 chr10 93206857 93209627 - processed_pseudogene KNOWN OTTHUMG00000018770.1 2771 1805 4 ENSG00000213432.2 RP11-624L12.1 chr10 93284004 93284558 - processed_pseudogene KNOWN OTTHUMG00000018771.2 555 555 1 ENSG00000138119.15 MYOF chr10 93306429 93482317 - protein_coding KNOWN OTTHUMG00000018772.5 175889 8473 175 ENSG00000203814.6 HIST2H2BF chr1 149782689 149812373 - protein_coding KNOWN OTTHUMG00000183159.2 29685 3196 9 ENSG00000138180.14 CEP55 chr10 93496632 93529092 + protein_coding KNOWN OTTHUMG00000018774.1 32461 3271 16 ENSG00000212396.1 RNA5SP323 chr10 93510548 93510680 - rRNA KNOWN NA 133 133 1 ENSG00000186188.9 FFAR4 chr10 93566665 93604480 + protein_coding KNOWN OTTHUMG00000034409.2 37816 4060 10 ENSG00000138207.11 RBP4 chr10 93591687 93601744 - protein_coding KNOWN OTTHUMG00000018773.2 10058 1449 32 ENSG00000221352.1 AL356214.1 chr10 93608586 93608699 + miRNA NOVEL NA 114 114 1 ENSG00000095464.9 PDE6C chr10 93612588 93666010 + protein_coding KNOWN OTTHUMG00000018775.2 53423 3310 25 ENSG00000148690.11 FRA10AC1 chr10 93667883 93702572 - protein_coding KNOWN OTTHUMG00000018776.1 34690 8142 26 ENSG00000108231.10 LGI1 chr10 93757809 93798174 + protein_coding KNOWN OTTHUMG00000018777.4 40366 7714 65 ENSG00000280660.1 RP11-437J2.3 chr10 93762453 93771991 + sense_intronic NOVEL OTTHUMG00000189680.1 9539 8444 2 ENSG00000280485.1 RP11-437J2.4 chr10 93772681 93788605 - antisense NOVEL OTTHUMG00000189688.1 15925 444 4 ENSG00000233030.2 RP11-196G18.3 chr1 149785659 149793020 - antisense NOVEL OTTHUMG00000012090.1 7362 3543 2 ENSG00000227995.1 RAB11AP1 chr10 93881293 93881938 - processed_pseudogene KNOWN OTTHUMG00000018778.1 646 646 1 ENSG00000176273.13 SLC35G1 chr10 93893973 93956062 + protein_coding KNOWN OTTHUMG00000018779.3 62090 6829 21 ENSG00000180764.13 PIPSL chr10 93958191 93961540 - transcribed_processed_pseudogene KNOWN OTTHUMG00000137480.3 3350 3350 2 ENSG00000274289.1 AL365510.1 chr10 93975258 93975349 + miRNA NOVEL NA 92 92 1 ENSG00000138193.13 PLCE1 chr10 93993989 94332823 + protein_coding KNOWN OTTHUMG00000018789.3 338835 13329 130 ENSG00000232913.6 PLCE1-AS2 chr10 94081950 94108814 - antisense NOVEL OTTHUMG00000018783.4 26865 4248 50 ENSG00000231575.1 RP11-162K11.4 chr10 94109116 94121107 + sense_intronic NOVEL OTTHUMG00000018782.1 11992 446 2 ENSG00000234724.1 HDAC1P1 chr10 94137748 94139500 + processed_pseudogene KNOWN OTTHUMG00000018784.1 1753 1445 2 ENSG00000206631.1 RNU6-657P chr10 94155639 94155745 - snRNA KNOWN NA 107 107 1 ENSG00000228553.1 RP11-391J2.3 chr10 94225160 94227288 - antisense NOVEL OTTHUMG00000018785.1 2129 384 2 ENSG00000131686.13 CA6 chr1 8945867 8975092 + protein_coding KNOWN OTTHUMG00000001763.6 29226 2662 38 ENSG00000183598.3 HIST2H3D chr1 149813271 149813681 - protein_coding KNOWN OTTHUMG00000012092.1 411 411 1 ENSG00000268894.5 PLCE1-AS1 chr10 94279277 94287478 - antisense NOVEL OTTHUMG00000018787.5 8202 2317 12 ENSG00000273450.1 RP11-76P2.4 chr10 94314907 94315327 - antisense NOVEL OTTHUMG00000186461.1 421 421 1 ENSG00000173145.10 NOC3L chr10 94333226 94362959 - protein_coding KNOWN OTTHUMG00000018788.1 29734 4464 34 ENSG00000108239.8 TBC1D12 chr10 94402504 94535930 + protein_coding KNOWN OTTHUMG00000018794.2 133427 6921 19 ENSG00000119969.13 HELLS chr10 94501434 94613905 + protein_coding KNOWN OTTHUMG00000018793.1 112472 10148 137 ENSG00000244332.1 RP11-119K6.6 chr10 94577439 94611238 + sense_overlapping NOVEL OTTHUMG00000018792.1 33800 645 2 ENSG00000235746.1 CTBP2P2 chr10 94646364 94647996 - processed_pseudogene KNOWN OTTHUMG00000018790.1 1633 1334 2 ENSG00000108242.11 CYP2C18 chr10 94683621 94736190 + protein_coding KNOWN OTTHUMG00000018796.2 52570 2418 17 ENSG00000276490.1 RP11-400G3.5 chr10 94688154 94853073 + protein_coding NOVEL OTTHUMG00000188303.1 164920 2395 14 ENSG00000165841.8 CYP2C19 chr10 94762624 94853260 + protein_coding KNOWN OTTHUMG00000018799.3 90637 2812 12 ENSG00000270882.2 HIST2H4A chr1 149832659 149839767 + protein_coding KNOWN OTTHUMG00000012189.8 7109 1876 7 ENSG00000230338.1 MTND4P19 chr10 94774156 94774633 - processed_pseudogene KNOWN OTTHUMG00000018795.1 478 478 1 ENSG00000235199.1 CYP2C58P chr10 94865852 94873129 - processed_pseudogene KNOWN OTTHUMG00000018797.1 7278 475 3 ENSG00000225354.1 RP11-400G3.3 chr10 94882554 94883343 + processed_pseudogene KNOWN OTTHUMG00000018798.1 790 790 1 ENSG00000138109.9 CYP2C9 chr10 94938658 94989390 + protein_coding KNOWN OTTHUMG00000018805.1 50733 3036 16 ENSG00000233377.1 MTND4P20 chr10 94940253 94941121 - processed_pseudogene KNOWN OTTHUMG00000018801.2 869 869 1 ENSG00000228460.1 CYP2C59P chr10 95007126 95007556 - unprocessed_pseudogene KNOWN OTTHUMG00000018802.1 431 269 2 ENSG00000260863.1 CYP2C60P chr10 95009674 95009812 + unprocessed_pseudogene KNOWN OTTHUMG00000172690.1 139 139 1 ENSG00000237885.1 RP11-208C17.4 chr10 95031640 95032048 + processed_pseudogene KNOWN OTTHUMG00000018803.1 409 409 1 ENSG00000138115.12 CYP2C8 chr10 95036772 95069497 - protein_coding KNOWN OTTHUMG00000018804.3 32726 2571 104 ENSG00000231829.2 RP11-310E22.5 chr10 95141925 95168425 - lincRNA NOVEL OTTHUMG00000018806.2 26501 420 5 ENSG00000203811.1 HIST2H3C chr1 149839538 149841193 - protein_coding KNOWN OTTHUMG00000012190.1 1656 1656 1 ENSG00000274691.1 RP11-310E22.6 chr10 95173085 95173187 - unprocessed_pseudogene KNOWN OTTHUMG00000187856.1 103 103 1 ENSG00000225533.1 PAWRP1 chr10 95183653 95184217 + processed_pseudogene KNOWN OTTHUMG00000018807.1 565 565 1 ENSG00000173124.13 ACSM6 chr10 95194200 95228928 + protein_coding KNOWN OTTHUMG00000018808.2 34729 2807 40 ENSG00000234026.1 RP11-310E22.4 chr10 95228243 95231144 - antisense NOVEL OTTHUMG00000018809.1 2902 663 2 ENSG00000107438.7 PDLIM1 chr10 95237572 95291024 - protein_coding KNOWN OTTHUMG00000018810.1 53453 2239 21 ENSG00000095637.19 SORBS1 chr10 95311771 95561414 - protein_coding KNOWN OTTHUMG00000018812.6 249644 10819 387 ENSG00000214362.2 RP11-7D5.2 chr10 95594598 95595372 + processed_pseudogene KNOWN OTTHUMG00000018816.1 775 775 1 ENSG00000059573.7 ALDH18A1 chr10 95605929 95656706 - protein_coding KNOWN OTTHUMG00000018815.2 50778 3766 50 ENSG00000119977.19 TCTN3 chr10 95663396 95694143 - protein_coding KNOWN OTTHUMG00000018814.6 30748 3223 68 ENSG00000138185.15 ENTPD1 chr10 95711779 95877266 + protein_coding KNOWN OTTHUMG00000018818.2 165488 14587 81 ENSG00000203812.2 HIST2H2AA4 chr1 149842188 149842736 - protein_coding KNOWN OTTHUMG00000188678.1 549 549 1 ENSG00000226688.5 ENTPD1-AS1 chr10 95753206 96090238 - antisense NOVEL OTTHUMG00000018822.2 337033 12528 46 ENSG00000240527.1 RP11-429G19.3 chr10 95833508 95873758 + sense_intronic NOVEL OTTHUMG00000018817.1 40251 587 2 ENSG00000270099.1 RP11-248J23.7 chr10 95860548 95924844 + protein_coding NOVEL OTTHUMG00000184157.1 64297 492 7 ENSG00000173088.11 C10orf131 chr10 95907603 95938723 + protein_coding KNOWN OTTHUMG00000018824.2 31121 1412 19 ENSG00000269948.4 RP11-248J23.6 chr10 95949968 95985028 + protein_coding NOVEL OTTHUMG00000184158.1 35061 2990 21 ENSG00000269920.1 RP11-690P14.4 chr10 95974029 96032675 + protein_coding NOVEL OTTHUMG00000184159.1 58647 2467 14 ENSG00000227805.1 RP11-248J23.5 chr10 95999778 96000243 - processed_pseudogene KNOWN OTTHUMG00000018821.1 466 466 1 ENSG00000188649.10 CC2D2B chr10 96000091 96032684 + protein_coding KNOWN OTTHUMG00000018820.6 32594 2297 28 ENSG00000107443.14 CCNJ chr10 96043394 96060870 + protein_coding KNOWN OTTHUMG00000018823.7 17477 4148 18 ENSG00000266407.1 MIR3157 chr10 96064315 96064399 - miRNA KNOWN NA 85 85 1 ENSG00000184678.9 HIST2H2BE chr1 149842204 149886652 - protein_coding KNOWN OTTHUMG00000012095.1 44449 2260 3 ENSG00000200728.1 RNU6-271P chr10 96112747 96112851 + snRNA KNOWN NA 105 105 1 ENSG00000278748.1 AC021037.2 chr10 96128392 96128452 + miRNA NOVEL NA 61 61 1 ENSG00000177853.13 ZNF518A chr10 96129715 96205288 + protein_coding KNOWN OTTHUMG00000018828.5 75574 10891 44 ENSG00000273577.1 AC021037.1 chr10 96130031 96130117 + miRNA NOVEL NA 87 87 1 ENSG00000229417.1 NPM1P25 chr10 96189366 96190219 - processed_pseudogene KNOWN OTTHUMG00000018826.1 854 854 1 ENSG00000095585.15 BLNK chr10 96191702 96271587 - protein_coding KNOWN OTTHUMG00000018827.3 79886 3655 89 ENSG00000229418.2 RP11-35J23.1 chr10 96292685 96306695 - antisense NOVEL OTTHUMG00000018829.2 14011 1924 4 ENSG00000107447.6 DNTT chr10 96304396 96338564 + protein_coding KNOWN OTTHUMG00000018832.2 34169 1972 22 ENSG00000197430.9 OPALIN chr10 96343216 96359365 - protein_coding KNOWN OTTHUMG00000018831.1 16150 3879 31 ENSG00000095587.8 TLL2 chr10 96364606 96513918 - protein_coding KNOWN OTTHUMG00000018833.2 149313 8151 36 ENSG00000281134.1 AC239868.3 chr1 149842355 149842495 + miRNA NOVEL NA 141 141 1 ENSG00000077147.13 TM9SF3 chr10 96518109 96587452 - protein_coding KNOWN OTTHUMG00000018834.3 69344 7095 38 ENSG00000235677.1 NPM1P26 chr10 96560185 96560922 + processed_pseudogene KNOWN OTTHUMG00000018835.1 738 738 1 ENSG00000155629.13 PIK3AP1 chr10 96593312 96720514 - protein_coding KNOWN OTTHUMG00000018838.2 127203 5691 61 ENSG00000202047.1 RNA5SP324 chr10 96619376 96619483 + rRNA KNOWN NA 108 108 1 ENSG00000227032.1 RP11-34E5.4 chr10 96620877 96621707 - processed_pseudogene KNOWN OTTHUMG00000018836.1 831 831 1 ENSG00000207287.1 RNU6-1274P chr10 96743167 96743273 + snRNA KNOWN NA 107 107 1 ENSG00000236552.2 RPL13AP5 chr10 96750288 96750899 + processed_pseudogene KNOWN OTTHUMG00000018837.1 612 612 1 ENSG00000207976.1 MIR607 chr10 96828669 96828764 - miRNA KNOWN NA 96 96 1 ENSG00000196233.10 LCOR chr10 96832260 96981043 + protein_coding KNOWN OTTHUMG00000018841.2 148784 11116 44 ENSG00000232875.1 HMGN2P35 chr10 96915633 96915902 - processed_pseudogene KNOWN OTTHUMG00000018839.1 270 270 1 ENSG00000220323.3 HIST2H2BD chr1 149843041 149843533 + processed_pseudogene KNOWN OTTHUMG00000035827.3 493 493 1 ENSG00000155640.6 C10orf12 chr10 96981284 96986212 + protein_coding KNOWN OTTHUMG00000018840.1 4929 4929 1 ENSG00000231025.1 RP11-175O19.4 chr10 96992450 96995959 + antisense NOVEL OTTHUMG00000154966.1 3510 3510 1 ENSG00000187122.15 SLIT1 chr10 96998038 97185920 - protein_coding KNOWN OTTHUMG00000018843.4 187883 9103 123 ENSG00000234855.1 SLIT1-AS1 chr10 97102756 97103747 + antisense NOVEL OTTHUMG00000018842.1 992 689 3 ENSG00000269891.2 ARHGAP19-SLIT1 chr10 97153045 97292637 - protein_coding NOVEL OTTHUMG00000184018.1 139593 4089 16 ENSG00000213390.9 ARHGAP19 chr10 97222173 97292673 - protein_coding KNOWN OTTHUMG00000018845.6 70501 6167 62 ENSG00000231398.1 RP11-375N9.2 chr10 97275012 97278097 + processed_pseudogene KNOWN OTTHUMG00000018844.1 3086 365 3 ENSG00000277308.1 Metazoa_SRP chr10 97297290 97297557 + misc_RNA NOVEL NA 268 268 1 ENSG00000237169.1 RP11-452K12.3 chr10 97309138 97309958 - processed_pseudogene KNOWN OTTHUMG00000018849.1 821 496 2 ENSG00000165879.8 FRAT1 chr10 97319267 97321915 + protein_coding KNOWN OTTHUMG00000018848.1 2649 2649 3 ENSG00000261716.1 RP11-196G18.22 chr1 149844498 149849024 - sense_overlapping NOVEL OTTHUMG00000176085.2 4527 4527 1 ENSG00000181274.6 FRAT2 chr10 97332497 97334709 - protein_coding KNOWN OTTHUMG00000018850.2 2213 2213 1 ENSG00000225850.3 RP11-452K12.4 chr10 97334564 97343203 + antisense NOVEL OTTHUMG00000018851.3 8640 805 2 ENSG00000052749.12 RRP12 chr10 97356358 97426076 - protein_coding KNOWN OTTHUMG00000018855.5 69719 8529 191 ENSG00000231508.1 RP11-452K12.6 chr10 97393197 97393547 - processed_pseudogene KNOWN OTTHUMG00000018852.1 351 351 1 ENSG00000231970.1 RP11-452K12.7 chr10 97401115 97419524 + antisense NOVEL OTTHUMG00000018853.1 18410 548 2 ENSG00000200737.1 Y_RNA chr10 97421195 97421307 - misc_RNA NOVEL NA 113 113 1 ENSG00000171314.8 PGAM1 chr10 97426160 97433441 + protein_coding KNOWN OTTHUMG00000018846.2 7282 2568 10 ENSG00000171311.11 EXOSC1 chr10 97436142 97446017 - protein_coding KNOWN OTTHUMG00000018854.3 9876 3345 63 ENSG00000171307.17 ZDHHC16 chr10 97446131 97457370 + protein_coding KNOWN OTTHUMG00000018847.3 11240 3078 151 ENSG00000155229.19 MMS19 chr10 97458324 97498794 - protein_coding KNOWN OTTHUMG00000018857.4 40471 5849 270 ENSG00000272993.1 RP11-196G18.24 chr1 149845816 149846486 + lincRNA NOVEL OTTHUMG00000186415.1 671 671 1 ENSG00000264677.1 AL355490.1 chr10 97482669 97482773 + miRNA NOVEL NA 105 105 1 ENSG00000165886.4 UBTD1 chr10 97498868 97571209 + protein_coding KNOWN OTTHUMG00000018856.1 72342 1706 3 ENSG00000165887.10 ANKRD2 chr10 97572499 97583884 + protein_coding KNOWN OTTHUMG00000018860.1 11386 1451 34 ENSG00000241935.7 HOGA1 chr10 97584323 97612802 + protein_coding KNOWN OTTHUMG00000018859.4 28480 4148 17 ENSG00000249967.1 RP11-548K23.11 chr10 97584374 97673910 + protein_coding PUTATIVE OTTHUMG00000162272.1 89537 1848 10 ENSG00000203942.4 C10orf62 chr10 97589727 97590934 + protein_coding KNOWN OTTHUMG00000018858.1 1208 1208 1 ENSG00000171160.16 MORN4 chr10 97614553 97633500 - protein_coding KNOWN OTTHUMG00000018861.3 18948 2512 11 ENSG00000155252.13 PI4K2A chr10 97640686 97676434 + protein_coding KNOWN OTTHUMG00000018863.1 35749 4189 9 ENSG00000119986.6 AVPI1 chr10 97677424 97687323 - protein_coding KNOWN OTTHUMG00000018864.1 9900 1457 3 ENSG00000155254.11 MARVELD1 chr10 97713173 97718152 + protein_coding KNOWN OTTHUMG00000018865.6 4980 3379 13 ENSG00000203819.6 HIST2H2BC chr1 149850193 149850772 - processed_pseudogene KNOWN OTTHUMG00000035826.3 580 580 1 ENSG00000155256.16 ZFYVE27 chr10 97737121 97760907 + protein_coding KNOWN OTTHUMG00000018867.6 23787 3899 87 ENSG00000120057.4 SFRP5 chr10 97766751 97771952 - protein_coding KNOWN OTTHUMG00000018866.1 5202 1836 3 ENSG00000227356.2 LINC00866 chr10 97828478 97849798 - lincRNA NOVEL OTTHUMG00000018868.2 21321 418 3 ENSG00000155265.9 GOLGA7B chr10 97850239 97871580 + protein_coding KNOWN OTTHUMG00000018869.2 21342 6458 11 ENSG00000095713.12 CRTAC1 chr10 97865000 98030828 - protein_coding KNOWN OTTHUMG00000018871.1 165829 3553 62 ENSG00000265398.1 AL139239.1 chr10 97875812 97875897 - miRNA NOVEL NA 86 86 1 ENSG00000278752.1 KCNQ1DN chr10 98076361 98076421 - misc_RNA NOVEL NA 61 61 1 ENSG00000166024.12 R3HCC1L chr10 98134624 98244897 + protein_coding KNOWN OTTHUMG00000018873.1 110274 3571 48 ENSG00000138131.3 LOXL4 chr10 98247690 98268250 - protein_coding KNOWN OTTHUMG00000018874.1 20561 3653 15 ENSG00000230928.1 RP11-34A14.3 chr10 98252023 98256575 + antisense NOVEL OTTHUMG00000018875.1 4553 1168 2 ENSG00000265141.2 RN7SL451P chr1 8979576 8979874 - misc_RNA KNOWN NA 299 299 1 ENSG00000272196.2 HIST2H2AA4 chr1 149851061 149851624 + protein_coding KNOWN OTTHUMG00000012097.1 564 564 1 ENSG00000119943.9 PYROXD2 chr10 98383565 98415184 - protein_coding KNOWN OTTHUMG00000018877.3 31620 3867 39 ENSG00000221419.1 MIR1287 chr10 98395218 98395307 - miRNA KNOWN NA 90 90 1 ENSG00000107521.17 HPS1 chr10 98416198 98446947 - protein_coding KNOWN OTTHUMG00000018876.1 30750 5301 149 ENSG00000264610.1 MIR4685 chr10 98431292 98431360 - miRNA KNOWN NA 69 69 1 ENSG00000172987.11 HPSE2 chr10 98457077 99235862 - protein_coding KNOWN OTTHUMG00000018880.2 778786 4421 57 ENSG00000274056.1 MIR6507 chr10 98924499 98924568 - miRNA KNOWN NA 70 70 1 ENSG00000236818.1 ARL5AP2 chr10 99013103 99013952 - processed_pseudogene KNOWN OTTHUMG00000018878.1 850 533 2 ENSG00000234109.1 RPL7P36 chr10 99047639 99048319 + processed_pseudogene KNOWN OTTHUMG00000018879.1 681 681 1 ENSG00000119946.10 CNNM1 chr10 99329099 99394330 + protein_coding KNOWN OTTHUMG00000018881.2 65232 6413 13 ENSG00000120053.10 GOT1 chr10 99396870 99430624 - protein_coding KNOWN OTTHUMG00000018882.1 33755 2424 14 ENSG00000280874.1 AC239868.2 chr1 149851317 149851457 - miRNA NOVEL NA 141 141 1 ENSG00000224934.2 RP11-441O15.3 chr10 99431191 99438117 + lincRNA NOVEL OTTHUMG00000018883.2 6927 2998 4 ENSG00000281581.1 U7 chr10 99502665 99502707 + snRNA NOVEL NA 43 43 1 ENSG00000257582.4 LINC01475 chr10 99526350 99531177 - lincRNA NOVEL OTTHUMG00000170536.1 4828 914 8 ENSG00000228778.1 RP11-129J12.1 chr10 99527081 99528261 + lincRNA NOVEL OTTHUMG00000018885.1 1181 392 2 ENSG00000119919.10 NKX2-3 chr10 99532933 99536524 + protein_coding KNOWN OTTHUMG00000018887.3 3592 2097 5 ENSG00000155287.9 SLC25A28 chr10 99610522 99620609 - protein_coding KNOWN OTTHUMG00000018886.2 10088 1755 13 ENSG00000260475.1 RP11-85A1.3 chr10 99621055 99621918 + lincRNA NOVEL OTTHUMG00000176194.1 864 864 1 ENSG00000229278.1 RP11-483F11.7 chr10 99651989 99653905 - antisense NOVEL OTTHUMG00000018892.1 1917 303 2 ENSG00000198018.6 ENTPD7 chr10 99659506 99706240 + protein_coding KNOWN OTTHUMG00000018888.3 46735 3657 16 ENSG00000233690.1 EBAG9P1 chr10 99697407 99697949 - processed_pseudogene KNOWN OTTHUMG00000018890.1 543 543 1 ENSG00000203852.3 HIST2H3A chr1 149852619 149854274 + protein_coding KNOWN OTTHUMG00000012094.1 1656 1656 1 ENSG00000119929.11 CUTC chr10 99702558 99756134 + protein_coding KNOWN OTTHUMG00000018889.3 53577 1806 30 ENSG00000014919.11 COX15 chr10 99711844 99732100 - protein_coding KNOWN OTTHUMG00000018893.1 20257 4177 20 ENSG00000023839.9 ABCC2 chr10 99782732 99852192 + protein_coding KNOWN OTTHUMG00000018895.1 69461 6232 43 ENSG00000227351.2 NANOGP6 chr10 99788564 99789410 - processed_pseudogene KNOWN OTTHUMG00000018891.2 847 847 1 ENSG00000107554.14 DNMBP chr10 99875577 100009919 - protein_coding KNOWN OTTHUMG00000018897.2 134343 7072 39 ENSG00000227695.4 DNMBP-AS1 chr10 99927010 99958381 + antisense KNOWN OTTHUMG00000018898.2 31372 2336 8 ENSG00000120054.10 CPN1 chr10 100042193 100081877 - protein_coding KNOWN OTTHUMG00000018896.1 39685 1887 14 ENSG00000232230.1 TPM4P1 chr10 100114417 100115223 - processed_pseudogene KNOWN OTTHUMG00000018905.1 807 807 1 ENSG00000270623.1 RP11-316M21.9 chr10 100143065 100143995 - processed_pseudogene KNOWN OTTHUMG00000184686.2 931 608 2 ENSG00000107566.12 ERLIN1 chr10 100150094 100188334 - protein_coding KNOWN OTTHUMG00000018900.3 38241 5792 34 ENSG00000270276.2 HIST2H4B chr1 149854045 149861210 - protein_coding KNOWN OTTHUMG00000188201.2 7166 1929 5 ENSG00000213341.9 CHUK chr10 100188298 100229619 - protein_coding KNOWN OTTHUMG00000018899.1 41322 6928 30 ENSG00000236308.1 RP11-316M21.7 chr10 100190036 100190747 + antisense NOVEL OTTHUMG00000018904.1 712 578 2 ENSG00000227492.1 RP11-316M21.6 chr10 100229667 100234000 + antisense NOVEL OTTHUMG00000018903.1 4334 846 5 ENSG00000095485.15 CWF19L1 chr10 100232298 100267680 - protein_coding KNOWN OTTHUMG00000018901.5 35383 3985 73 ENSG00000212464.1 SNORA12 chr10 100237156 100237302 - snoRNA KNOWN NA 147 147 1 ENSG00000230224.1 PHBP9 chr10 100248271 100249095 + processed_pseudogene KNOWN OTTHUMG00000018902.1 825 825 1 ENSG00000207362.1 RNU6-422P chr10 100258571 100258677 + snRNA KNOWN NA 107 107 1 ENSG00000196072.10 BLOC1S2 chr10 100273280 100286712 - protein_coding KNOWN OTTHUMG00000018908.2 13433 2943 24 ENSG00000107593.16 PKD2L1 chr10 100288154 100330486 - protein_coding KNOWN OTTHUMG00000018910.3 42333 3065 37 ENSG00000231188.1 RP11-34D15.2 chr10 100335563 100346390 - antisense NOVEL OTTHUMG00000018907.1 10828 471 4 ENSG00000264207.1 RP11-196G18.23 chr1 149861271 149862504 + antisense NOVEL OTTHUMG00000178927.1 1234 1234 1 ENSG00000099194.5 SCD chr10 100347124 100364834 + protein_coding KNOWN OTTHUMG00000018906.2 17711 5362 6 ENSG00000235823.1 OLMALINC chr10 100373615 100383368 + lincRNA KNOWN OTTHUMG00000018909.1 9754 2551 2 ENSG00000212325.1 Y_RNA chr10 100398352 100398446 - misc_RNA NOVEL NA 95 95 1 ENSG00000273030.1 RP11-285F16.1 chr10 100412934 100413421 + lincRNA NOVEL OTTHUMG00000186462.1 488 488 1 ENSG00000075290.7 WNT8B chr10 100463041 100483744 + protein_coding KNOWN OTTHUMG00000018912.1 20704 2112 6 ENSG00000075826.15 SEC31B chr10 100486642 100519864 - protein_coding KNOWN OTTHUMG00000019342.4 33223 7938 164 ENSG00000255339.5 RP11-411B6.6 chr10 100505628 100529881 - protein_coding NOVEL OTTHUMG00000166603.1 24254 2139 42 ENSG00000166136.14 NDUFB8 chr10 100523740 100530000 - protein_coding KNOWN OTTHUMG00000019346.3 6261 1999 34 ENSG00000166135.12 HIF1AN chr10 100529072 100559998 + protein_coding KNOWN OTTHUMG00000018911.5 30927 13950 24 ENSG00000274660.1 Metazoa_SRP chr10 100666695 100667009 - misc_RNA NOVEL NA 315 315 1 ENSG00000184260.5 HIST2H2AC chr1 149886975 149887364 + protein_coding KNOWN OTTHUMG00000035825.1 390 390 1 ENSG00000075891.20 PAX2 chr10 100735603 100829941 + protein_coding KNOWN OTTHUMG00000018913.4 94339 6243 67 ENSG00000222072.1 Y_RNA chr10 100907174 100907280 - misc_RNA NOVEL NA 107 107 1 ENSG00000272572.1 RP11-179B2.2 chr10 100911103 100912739 - antisense NOVEL OTTHUMG00000186470.1 1637 1637 1 ENSG00000119906.10 FAM178A chr10 100912569 100965136 + protein_coding KNOWN OTTHUMG00000018919.4 52568 9131 48 ENSG00000273476.1 RP11-108L7.14 chr10 100967688 100968135 + lincRNA NOVEL OTTHUMG00000186476.1 448 448 1 ENSG00000055950.15 MRPL43 chr10 100969458 100987515 - protein_coding KNOWN OTTHUMG00000018920.3 18058 3573 58 ENSG00000095539.14 SEMA4G chr10 100969518 100985871 + protein_coding KNOWN OTTHUMG00000018922.2 16354 5253 96 ENSG00000207551.1 MIR608 chr10 100974985 100975084 + miRNA KNOWN NA 100 100 1 ENSG00000236662.1 RP11-108L7.4 chr10 100980507 100985614 - antisense NOVEL OTTHUMG00000018923.1 5108 342 2 ENSG00000107815.6 C10orf2 chr10 100987367 100994401 + protein_coding KNOWN OTTHUMG00000018917.1 7035 3508 22 ENSG00000280566.1 AC239868.1 chr1 149887178 149887318 - miRNA NOVEL NA 141 141 1 ENSG00000107816.16 LZTS2 chr10 100996618 101007836 + protein_coding KNOWN OTTHUMG00000018914.3 11219 6547 22 ENSG00000186862.16 PDZD7 chr10 101007683 101031157 - protein_coding KNOWN OTTHUMG00000018916.3 23475 5821 52 ENSG00000107819.12 SFXN3 chr10 101031234 101041244 + protein_coding KNOWN OTTHUMG00000018921.3 10011 4631 44 ENSG00000273162.1 RP11-108L7.15 chr10 101060029 101061005 - lincRNA NOVEL OTTHUMG00000186479.1 977 977 1 ENSG00000107821.13 KAZALD1 chr10 101061841 101068131 + protein_coding KNOWN OTTHUMG00000018918.3 6291 3613 20 ENSG00000236311.5 TLX1NB chr10 101089321 101131126 - protein_coding KNOWN OTTHUMG00000018925.4 41806 1891 6 ENSG00000107807.11 TLX1 chr10 101130505 101137789 + protein_coding KNOWN OTTHUMG00000019341.5 7285 3421 12 ENSG00000237579.2 LINC01514 chr10 101176323 101194147 + lincRNA NOVEL OTTHUMG00000018926.2 17825 1338 6 ENSG00000270973.1 SMARCE1P7 chr10 101181144 101181951 - processed_pseudogene KNOWN OTTHUMG00000184685.1 808 485 2 ENSG00000138136.6 LBX1 chr10 101226195 101229794 - protein_coding KNOWN OTTHUMG00000018927.4 3600 2900 2 ENSG00000184270.4 HIST2H2AB chr1 149887524 149887916 - protein_coding KNOWN OTTHUMG00000012085.1 393 393 1 ENSG00000227128.4 LBX1-AS1 chr10 101229594 101270148 + processed_transcript KNOWN OTTHUMG00000170500.3 40555 3448 16 ENSG00000229649.1 RP11-107I14.4 chr10 101252821 101263550 - lincRNA NOVEL OTTHUMG00000018930.1 10730 2222 3 ENSG00000222238.1 RNU2-43P chr10 101307529 101307718 + snRNA KNOWN NA 190 190 1 ENSG00000225208.1 RP11-107I14.2 chr10 101311018 101311505 + lincRNA NOVEL OTTHUMG00000018929.1 488 382 2 ENSG00000230967.2 RP11-107I14.5 chr10 101322485 101323394 - lincRNA NOVEL OTTHUMG00000018931.2 910 522 3 ENSG00000166167.16 BTRC chr10 101354033 101557321 + protein_coding KNOWN OTTHUMG00000018932.2 203289 6613 64 ENSG00000222414.1 RNU2-59P chr10 101364845 101365035 - snRNA KNOWN NA 191 191 1 ENSG00000166171.11 DPCD chr10 101570560 101609668 + protein_coding KNOWN OTTHUMG00000018934.2 39109 1718 32 ENSG00000166169.15 POLL chr10 101578882 101588270 - protein_coding KNOWN OTTHUMG00000018933.2 9389 5420 98 ENSG00000263436.1 MIR3158-1 chr10 101601417 101601497 + miRNA KNOWN NA 81 81 1 ENSG00000178096.8 BOLA1 chr1 149887890 149900798 + protein_coding KNOWN OTTHUMG00000012087.3 12909 1461 9 ENSG00000107829.12 FBXW4 chr10 101610664 101695295 - protein_coding KNOWN OTTHUMG00000018938.4 84632 5038 24 ENSG00000222051.1 RNU6-1165P chr10 101622859 101622965 + snRNA KNOWN NA 107 107 1 ENSG00000224817.1 RP11-190J1.3 chr10 101704652 101708401 - lincRNA NOVEL OTTHUMG00000018941.1 3750 291 2 ENSG00000107831.11 FGF8 chr10 101770130 101780369 - protein_coding KNOWN OTTHUMG00000018940.2 10240 1403 36 ENSG00000107833.9 NPM3 chr10 101781325 101783413 - protein_coding KNOWN OTTHUMG00000018942.2 2089 928 19 ENSG00000198408.12 MGEA5 chr10 101784443 101818465 - protein_coding KNOWN OTTHUMG00000018939.3 34023 7247 86 ENSG00000226009.1 KCNIP2-AS1 chr10 101819078 101828779 + antisense NOVEL OTTHUMG00000018936.1 9702 850 3 ENSG00000120049.17 KCNIP2 chr10 101825974 101843920 - protein_coding KNOWN OTTHUMG00000018937.2 17947 3294 100 ENSG00000120029.11 C10orf76 chr10 101845599 102056193 - protein_coding KNOWN OTTHUMG00000018943.1 210595 4747 41 ENSG00000278628.1 AL391827.1 chr10 101902600 101902658 - miRNA NOVEL NA 59 59 1 ENSG00000159164.8 SV2A chr1 149903318 149917882 - protein_coding KNOWN OTTHUMG00000012209.2 14565 4824 25 ENSG00000274742.1 Metazoa_SRP chr10 101912998 101913279 - misc_RNA NOVEL NA 282 282 1 ENSG00000222430.1 Y_RNA chr10 101952605 101952704 - misc_RNA NOVEL NA 100 100 1 ENSG00000166189.7 HPS6 chr10 102065390 102068038 + protein_coding KNOWN OTTHUMG00000018945.2 2649 2649 1 ENSG00000224302.1 RP11-302K17.3 chr10 102085476 102085730 - processed_pseudogene KNOWN OTTHUMG00000018946.1 255 255 1 ENSG00000229629.1 RP11-302K17.4 chr10 102089968 102090062 + processed_pseudogene KNOWN OTTHUMG00000018947.1 95 95 1 ENSG00000198728.9 LDB1 chr10 102107560 102120453 - protein_coding KNOWN OTTHUMG00000018950.1 12894 2790 31 ENSG00000148840.9 PPRC1 chr10 102132994 102150331 + protein_coding KNOWN OTTHUMG00000018948.1 17338 6095 48 ENSG00000166197.15 NOLC1 chr10 102152176 102163871 + protein_coding KNOWN OTTHUMG00000018944.4 11696 3970 90 ENSG00000119915.4 ELOVL3 chr10 102226328 102229589 + protein_coding KNOWN OTTHUMG00000018951.1 3262 1371 4 ENSG00000107859.8 PITX3 chr10 102230186 102241474 - protein_coding KNOWN OTTHUMG00000018952.1 11289 1391 8 ENSG00000197241.3 SLC2A7 chr1 9003300 9026345 - protein_coding KNOWN OTTHUMG00000057499.3 23046 1539 12 ENSG00000143368.9 SF3B4 chr1 149923317 149928344 - protein_coding KNOWN OTTHUMG00000012208.2 5028 2245 9 ENSG00000107862.4 GBF1 chr10 102245532 102382899 + protein_coding KNOWN OTTHUMG00000018955.1 137368 6641 42 ENSG00000251989.2 AL160011.1 chr10 102261230 102261306 + miRNA NOVEL NA 77 77 1 ENSG00000077150.16 NFKB2 chr10 102394110 102402529 + protein_coding KNOWN OTTHUMG00000018962.3 8420 4484 114 ENSG00000059915.15 PSD chr10 102402617 102421539 - protein_coding KNOWN OTTHUMG00000018954.3 18923 6338 74 ENSG00000275957.1 AL121928.1 chr10 102409042 102409102 - miRNA NOVEL NA 61 61 1 ENSG00000107872.11 FBXL15 chr10 102419189 102423136 + protein_coding KNOWN OTTHUMG00000018957.6 3948 2593 25 ENSG00000107874.9 CUEDC2 chr10 102423245 102432661 - protein_coding KNOWN OTTHUMG00000018958.2 9417 1412 22 ENSG00000202569.3 MIR146B chr10 102436500 102436609 + miRNA KNOWN NA 110 110 1 ENSG00000269609.4 RPARP-AS1 chr10 102449817 102461106 + processed_transcript NOVEL OTTHUMG00000182529.1 11290 5660 20 ENSG00000120055.7 C10orf95 chr10 102449837 102451543 - lincRNA KNOWN OTTHUMG00000018959.1 1707 1469 2 ENSG00000014914.18 MTMR11 chr1 149928651 149936898 - protein_coding KNOWN OTTHUMG00000012207.6 8248 4591 96 ENSG00000138111.13 TMEM180 chr10 102461395 102477045 + protein_coding KNOWN OTTHUMG00000018961.2 15651 3526 26 ENSG00000138107.10 ACTR1A chr10 102479229 102502711 - protein_coding KNOWN OTTHUMG00000018956.2 23483 4327 38 ENSG00000273262.1 RP11-18I14.11 chr10 102483039 102483559 + antisense NOVEL OTTHUMG00000186502.1 521 521 1 ENSG00000107882.10 SUFU chr10 102503987 102633535 + protein_coding KNOWN OTTHUMG00000018966.4 129549 6865 39 ENSG00000228657.1 RP11-170J3.2 chr10 102572757 102573225 - processed_pseudogene KNOWN OTTHUMG00000018963.1 469 469 1 ENSG00000207029.1 RNU6-43P chr10 102591524 102591630 + snRNA KNOWN NA 107 107 1 ENSG00000272933.1 RP11-47A8.5 chr10 102642792 102644140 - lincRNA NOVEL OTTHUMG00000186503.1 1349 1349 1 ENSG00000171206.12 TRIM8 chr10 102644496 102658407 + protein_coding KNOWN OTTHUMG00000018964.4 13912 2916 21 ENSG00000138175.8 ARL3 chr10 102673731 102714407 - protein_coding KNOWN OTTHUMG00000018965.2 40677 3844 6 ENSG00000156398.11 SFXN2 chr10 102714538 102743492 + protein_coding KNOWN OTTHUMG00000018967.3 28955 8034 80 ENSG00000264522.4 OTUD7B chr1 149937812 150010676 - protein_coding KNOWN OTTHUMG00000012291.5 72865 12177 27 ENSG00000166272.15 WBP1L chr10 102743970 102816267 + protein_coding KNOWN OTTHUMG00000018968.2 72298 4281 8 ENSG00000252994.1 RNU6-1231P chr10 102803929 102804031 + snRNA KNOWN NA 103 103 1 ENSG00000148795.5 CYP17A1 chr10 102830531 102837533 - protein_coding KNOWN OTTHUMG00000018969.1 7003 3386 13 ENSG00000203886.4 CYP17A1-AS1 chr10 102832721 102834516 + antisense NOVEL OTTHUMG00000018970.2 1796 491 2 ENSG00000213061.2 PFN1P11 chr10 102838011 102845473 - processed_pseudogene KNOWN OTTHUMG00000018971.1 7463 389 2 ENSG00000236937.2 PTGES3P4 chr10 102845595 102845950 + processed_pseudogene KNOWN OTTHUMG00000018973.2 356 356 1 ENSG00000166275.14 C10orf32 chr10 102854223 102864961 + protein_coding KNOWN OTTHUMG00000018975.2 10739 2708 14 ENSG00000270316.1 C10orf32-ASMT chr10 102854272 102901899 + protein_coding NOVEL OTTHUMG00000184175.2 47628 2670 15 ENSG00000214435.6 AS3MT chr10 102869516 102901899 + protein_coding KNOWN OTTHUMG00000018972.1 32384 2404 24 ENSG00000235266.1 RP11-753C18.8 chr10 102887874 102888188 - processed_pseudogene KNOWN OTTHUMG00000018974.1 315 315 1 ENSG00000223945.2 RP11-458I7.1 chr1 150053864 150055034 + processed_pseudogene KNOWN OTTHUMG00000012509.2 1171 870 2 ENSG00000272912.1 RP11-724N1.1 chr10 102914585 102915404 + lincRNA NOVEL OTTHUMG00000186504.1 820 820 1 ENSG00000148842.16 CNNM2 chr10 102918293 103090221 + protein_coding KNOWN OTTHUMG00000018976.3 171929 16324 20 ENSG00000278498.1 uc_338 chr10 103027336 103027498 + misc_RNA NOVEL NA 163 163 1 ENSG00000076685.17 NT5C2 chr10 103088017 103193306 - protein_coding KNOWN OTTHUMG00000018981.5 105290 5156 123 ENSG00000237827.1 RP11-332O19.2 chr10 103125017 103125416 - processed_pseudogene KNOWN OTTHUMG00000018977.1 400 400 1 ENSG00000276694.1 AL360001.1 chr10 103165134 103165196 - miRNA NOVEL NA 63 63 1 ENSG00000213277.3 MARCKSL1P1 chr10 103175554 103176094 + processed_pseudogene KNOWN OTTHUMG00000018978.1 541 541 1 ENSG00000229256.1 ST13P13 chr10 103215709 103216800 + processed_pseudogene KNOWN OTTHUMG00000018979.1 1092 1092 1 ENSG00000235376.5 RPEL1 chr10 103245887 103248016 + protein_coding PUTATIVE OTTHUMG00000018980.2 2130 2130 1 ENSG00000148798.8 INA chr10 103277163 103290351 + protein_coding KNOWN OTTHUMG00000018986.1 13189 3231 12 ENSG00000136631.11 VPS45 chr1 150067293 150145327 + protein_coding KNOWN OTTHUMG00000012511.4 78035 6262 95 ENSG00000156374.13 PCGF6 chr10 103302796 103351134 - protein_coding KNOWN OTTHUMG00000018982.1 48339 2613 29 ENSG00000212413.1 RNU11-3P chr10 103312436 103312568 - snRNA KNOWN NA 133 133 1 ENSG00000148835.10 TAF5 chr10 103367967 103389065 + protein_coding KNOWN OTTHUMG00000018985.1 21099 3268 11 ENSG00000173915.11 USMG5 chr10 103389041 103396466 - protein_coding KNOWN OTTHUMG00000018984.1 7426 898 23 ENSG00000221767.1 MIR1307 chr10 103394253 103394401 - miRNA KNOWN NA 149 149 1 ENSG00000148843.12 PDCD11 chr10 103396648 103446292 + protein_coding KNOWN OTTHUMG00000018988.2 49645 7382 49 ENSG00000138172.9 CALHM2 chr10 103446786 103452402 - protein_coding KNOWN OTTHUMG00000018990.1 5617 3108 20 ENSG00000273485.1 RP11-225H22.7 chr10 103450196 103450852 + antisense NOVEL OTTHUMG00000186511.1 657 657 1 ENSG00000234699.1 RP11-225H22.4 chr10 103452846 103462695 + antisense NOVEL OTTHUMG00000018992.1 9850 657 2 ENSG00000185933.6 CALHM1 chr10 103453387 103458888 - protein_coding KNOWN OTTHUMG00000018991.1 5502 3053 2 ENSG00000023902.12 PLEKHO1 chr1 150149183 150164720 + protein_coding KNOWN OTTHUMG00000012510.5 15538 6565 32 ENSG00000183128.7 CALHM3 chr10 103472804 103479240 - protein_coding KNOWN OTTHUMG00000018989.1 6437 1652 3 ENSG00000235470.4 NEURL1-AS1 chr10 103479603 103517393 - antisense NOVEL OTTHUMG00000018993.1 37791 1017 6 ENSG00000107954.9 NEURL1 chr10 103493979 103592552 + protein_coding KNOWN OTTHUMG00000018995.1 98574 4961 14 ENSG00000226431.1 RP11-416N2.3 chr10 103549075 103550964 + sense_intronic NOVEL OTTHUMG00000018994.1 1890 524 2 ENSG00000107957.15 SH3PXD2A chr10 103594027 103855543 - protein_coding KNOWN OTTHUMG00000018997.2 261517 11756 54 ENSG00000273108.1 RP11-416N2.4 chr10 103608619 103610050 + antisense NOVEL OTTHUMG00000186512.1 1432 1432 1 ENSG00000222503.1 Y_RNA chr10 103673158 103673265 + misc_RNA NOVEL NA 108 108 1 ENSG00000280693.1 SH3PXD2A-AS1 chr10 103745966 103755423 + antisense KNOWN OTTHUMG00000189516.1 9458 2217 7 ENSG00000260461.1 RP11-541N10.3 chr10 103877374 103879761 - sense_overlapping NOVEL OTTHUMG00000176198.1 2388 2388 1 ENSG00000107960.9 OBFC1 chr10 103882542 103918205 - protein_coding KNOWN OTTHUMG00000018996.1 35664 1617 36 ENSG00000266187.2 RN7SL480P chr1 150211632 150211925 + misc_RNA KNOWN NA 294 294 1 ENSG00000065613.12 SLK chr10 103967201 104029233 + protein_coding KNOWN OTTHUMG00000018999.1 62033 7974 40 ENSG00000266754.2 RN7SL524P chr10 103974515 103974814 - misc_RNA KNOWN NA 300 300 1 ENSG00000065618.15 COL17A1 chr10 104031286 104086002 - protein_coding KNOWN OTTHUMG00000018998.2 54717 6426 145 ENSG00000216083.1 MIR936 chr10 104048089 104048186 - miRNA KNOWN NA 98 98 1 ENSG00000156384.13 SFR1 chr10 104122058 104126385 + protein_coding KNOWN OTTHUMG00000019000.1 4328 1812 10 ENSG00000197748.11 CFAP43 chr10 104129888 104232362 - protein_coding KNOWN OTTHUMG00000019002.2 102475 7184 117 ENSG00000208033.1 MIR609 chr10 104218789 104218883 - miRNA KNOWN NA 95 95 1 ENSG00000148834.11 GSTO1 chr10 104235356 104267459 + protein_coding KNOWN OTTHUMG00000019001.1 32104 1691 36 ENSG00000266852.2 MIR4482 chr10 104268336 104268405 - miRNA KNOWN NA 70 70 1 ENSG00000065621.13 GSTO2 chr10 104268873 104304945 + protein_coding KNOWN OTTHUMG00000019006.4 36073 9921 35 ENSG00000143401.13 ANP32E chr1 150218417 150236156 - protein_coding KNOWN OTTHUMG00000012547.5 17740 3605 50 ENSG00000148841.14 ITPRIP chr10 104309698 104338404 - protein_coding KNOWN OTTHUMG00000184003.2 28707 7026 10 ENSG00000270075.1 RP11-127L20.5 chr10 104312141 104313881 + antisense NOVEL OTTHUMG00000019003.2 1741 244 2 ENSG00000228261.1 RP11-127L20.3 chr10 104323369 104327004 + lincRNA NOVEL OTTHUMG00000019004.1 3636 954 3 ENSG00000231233.1 CCDC147-AS1 chr10 104351591 104353575 - antisense NOVEL OTTHUMG00000019005.1 1985 795 2 ENSG00000120051.13 CFAP58 chr10 104353764 104455090 + protein_coding KNOWN OTTHUMG00000019007.1 101327 3548 21 ENSG00000225768.1 RP11-127O4.3 chr10 104474939 104480274 - lincRNA NOVEL OTTHUMG00000019008.1 5336 1013 3 ENSG00000237761.1 RP11-127O4.2 chr10 104616102 104616973 + lincRNA NOVEL OTTHUMG00000019009.1 872 369 2 ENSG00000156395.11 SORCS3 chr10 104641101 105265235 + protein_coding KNOWN OTTHUMG00000019011.1 624135 5764 60 ENSG00000226387.2 SORCS3-AS1 chr10 104664608 104666200 - antisense NOVEL OTTHUMG00000019010.2 1593 1278 2 ENSG00000207068.1 RNU6-463P chr10 105534659 105534765 + snRNA KNOWN NA 107 107 1 ENSG00000222222.1 RNU2-17P chr1 150236967 150237156 + snRNA KNOWN NA 190 190 1 ENSG00000233477.1 RP11-45P22.2 chr10 105685383 105685865 - processed_pseudogene KNOWN OTTHUMG00000019014.1 483 483 1 ENSG00000213260.3 YWHAZP5 chr10 105686322 105687051 + processed_pseudogene KNOWN OTTHUMG00000019013.1 730 730 1 ENSG00000229466.1 RP11-56I23.1 chr10 105808775 105819197 - lincRNA NOVEL OTTHUMG00000019015.1 10423 456 3 ENSG00000229775.5 RP11-298H24.1 chr10 106140264 106188722 + lincRNA NOVEL OTTHUMG00000019016.2 48459 1890 13 ENSG00000215002.2 RP11-446H13.2 chr10 106550106 106551121 + processed_pseudogene KNOWN OTTHUMG00000019017.1 1016 461 2 ENSG00000108018.14 SORCS1 chr10 106573663 107164534 - protein_coding KNOWN OTTHUMG00000019018.5 590872 9964 143 ENSG00000281014.1 AL160010.1 chr10 106952525 106952680 + miRNA NOVEL NA 156 156 1 ENSG00000200626.1 RNA5SP325 chr10 106970021 106970150 + rRNA KNOWN NA 130 130 1 ENSG00000200079.1 RNA5SP326 chr10 107461560 107461669 + rRNA KNOWN NA 110 110 1 ENSG00000229981.6 LINC01435 chr10 107694973 108197849 - lincRNA NOVEL OTTHUMG00000019020.7 502877 6148 101 ENSG00000276110.1 RP4-790G17.7 chr1 150255095 150257286 - antisense NOVEL OTTHUMG00000185690.2 2192 714 2 ENSG00000234544.2 PTGES3P5 chr10 108296099 108296532 + processed_pseudogene KNOWN OTTHUMG00000019021.2 434 434 1 ENSG00000203434.2 RP11-163F15.1 chr10 108547975 108561815 - lincRNA NOVEL OTTHUMG00000019022.1 13841 575 3 ENSG00000222631.3 AL356476.1 chr10 108703829 108703930 - miRNA NOVEL NA 102 102 1 ENSG00000223381.1 RP11-655H13.2 chr10 108710518 108839363 + lincRNA NOVEL OTTHUMG00000019024.1 128846 480 3 ENSG00000224498.1 MAPKAPK5P1 chr10 108848186 108849561 + processed_pseudogene KNOWN OTTHUMG00000019023.1 1376 1376 1 ENSG00000222436.1 RN7SKP278 chr10 108940969 108941310 - misc_RNA KNOWN NA 342 342 1 ENSG00000252574.2 RNU5B-6P chr10 109184934 109185001 - snRNA KNOWN NA 68 68 1 ENSG00000200217.1 RNU6-839P chr10 109239639 109239746 + snRNA KNOWN NA 108 108 1 ENSG00000232728.1 PHB2P1 chr10 109528119 109529008 + processed_pseudogene KNOWN OTTHUMG00000019025.1 890 890 1 ENSG00000237242.1 BTF3P15 chr10 109534655 109534990 + processed_pseudogene KNOWN OTTHUMG00000019026.1 336 336 1 ENSG00000224813.2 RP4-669L17.4 chr1 485032 485211 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000002857.4 180 180 1 ENSG00000142583.16 SLC2A5 chr1 9035107 9088478 - protein_coding KNOWN OTTHUMG00000001771.2 53372 6693 63 ENSG00000118298.9 CA14 chr1 150257159 150265078 + protein_coding KNOWN OTTHUMG00000012549.5 7920 3833 34 ENSG00000270333.1 RP11-566F5.2 chr10 109661814 109662050 + processed_pseudogene KNOWN OTTHUMG00000184642.1 237 237 1 ENSG00000270294.1 RP11-566F5.1 chr10 109680442 109681041 + processed_pseudogene KNOWN OTTHUMG00000184641.1 600 600 1 ENSG00000224907.1 RP11-451M19.2 chr10 109807651 109808129 + processed_pseudogene KNOWN OTTHUMG00000019027.1 479 479 1 ENSG00000108039.16 XPNPEP1 chr10 109864766 109923553 - protein_coding KNOWN OTTHUMG00000019029.3 58788 6691 225 ENSG00000272160.1 U4 chr10 109869858 109869992 + snRNA NOVEL NA 135 135 1 ENSG00000203876.8 ADD3-AS1 chr10 109940104 110008381 - processed_transcript KNOWN OTTHUMG00000019028.3 68278 9007 19 ENSG00000148700.12 ADD3 chr10 109996368 110135565 + protein_coding KNOWN OTTHUMG00000019032.1 139198 6541 131 ENSG00000226734.1 SNRPGP12 chr10 110139214 110139426 - processed_pseudogene KNOWN OTTHUMG00000019031.1 213 213 1 ENSG00000119950.19 MXI1 chr10 110207605 110287365 + protein_coding KNOWN OTTHUMG00000019033.1 79761 4607 56 ENSG00000228417.1 RP11-549L6.3 chr10 110207850 110208591 - antisense NOVEL OTTHUMG00000019035.1 742 470 3 ENSG00000117362.11 APH1A chr1 150265399 150269580 - protein_coding KNOWN OTTHUMG00000012545.2 4182 3473 39 ENSG00000214067.2 RP11-549L6.2 chr10 110257064 110257843 + processed_pseudogene KNOWN OTTHUMG00000019034.1 780 468 2 ENSG00000119953.11 SMNDC1 chr10 110290730 110304951 - protein_coding KNOWN OTTHUMG00000019036.2 14222 5417 24 ENSG00000273143.1 RP11-525A16.4 chr10 110428840 110496204 - lincRNA NOVEL OTTHUMG00000186513.2 67365 628 6 ENSG00000221359.1 AL355512.1 chr10 110434241 110434385 + miRNA NOVEL NA 145 145 1 ENSG00000237642.1 HMGB3P5 chr10 110450629 110451240 + processed_pseudogene KNOWN OTTHUMG00000019038.1 612 612 1 ENSG00000138166.5 DUSP5 chr10 110497838 110511544 + protein_coding KNOWN OTTHUMG00000019040.1 13707 2615 8 ENSG00000233518.1 RPL7P35 chr10 110550115 110550854 - processed_pseudogene KNOWN OTTHUMG00000019041.1 740 740 1 ENSG00000108055.9 SMC3 chr10 110567691 110604636 + protein_coding KNOWN OTTHUMG00000019042.1 36946 4275 38 ENSG00000223302.1 Y_RNA chr10 110642678 110642785 - misc_RNA NOVEL NA 108 108 1 ENSG00000203867.7 RBM20 chr10 110644397 110839469 + protein_coding KNOWN OTTHUMG00000019043.5 195073 8162 21 ENSG00000118292.7 C1orf54 chr1 150268200 150280916 + protein_coding KNOWN OTTHUMG00000012546.1 12717 1351 19 ENSG00000252036.1 RN7SKP288 chr10 110756456 110756723 + misc_RNA KNOWN NA 268 268 1 ENSG00000199364.1 RNA5SP327 chr10 110761142 110761242 + rRNA KNOWN NA 101 101 1 ENSG00000232470.1 RP11-313D6.3 chr10 110869743 110871594 + lincRNA NOVEL OTTHUMG00000019044.1 1852 401 2 ENSG00000203497.2 PDCD4-AS1 chr10 110869868 110872233 - antisense NOVEL OTTHUMG00000019045.1 2366 778 2 ENSG00000150593.14 PDCD4 chr10 110871795 110900006 + protein_coding KNOWN OTTHUMG00000019048.1 28212 4547 71 ENSG00000265827.1 MIR4680 chr10 110898090 110898155 + miRNA KNOWN NA 66 66 1 ENSG00000214413.6 BBIP1 chr10 110898730 110919274 - protein_coding KNOWN OTTHUMG00000019046.3 20545 8075 33 ENSG00000278601.1 RP11-348N5.9 chr10 110907483 110908182 + antisense NOVEL OTTHUMG00000186514.1 700 700 1 ENSG00000270589.1 RP11-348N5.7 chr10 110910596 110912244 + antisense NOVEL OTTHUMG00000184233.1 1649 1649 1 ENSG00000108061.10 SHOC2 chr10 110919547 111013667 + protein_coding KNOWN OTTHUMG00000019047.1 94121 4429 37 ENSG00000159208.14 CIART chr1 150282543 150287093 + protein_coding KNOWN OTTHUMG00000012548.3 4551 2696 36 ENSG00000234118.1 RPL13AP6 chr10 110936622 110937233 - processed_pseudogene KNOWN OTTHUMG00000019049.1 612 612 1 ENSG00000221214.1 MIR548E chr10 110988926 110989013 + miRNA KNOWN NA 88 88 1 ENSG00000150594.6 ADRA2A chr10 111077163 111080907 + protein_coding KNOWN OTTHUMG00000019050.2 3745 3745 1 ENSG00000213247.3 RP11-479A21.1 chr10 111104956 111105248 + processed_pseudogene KNOWN OTTHUMG00000019051.1 293 293 1 ENSG00000237618.1 BTBD7P2 chr10 111322778 111323397 + processed_pseudogene KNOWN OTTHUMG00000019053.1 620 620 1 ENSG00000227851.1 RP11-381K7.1 chr10 111349939 111352103 - lincRNA NOVEL OTTHUMG00000019052.1 2165 427 2 ENSG00000230809.1 RP11-309P22.1 chr10 111498191 111498941 - processed_pseudogene KNOWN OTTHUMG00000019054.1 751 751 1 ENSG00000277847.1 AL392167.1 chr10 111958712 111958799 + miRNA NOVEL NA 88 88 1 ENSG00000119927.12 GPAM chr10 112149864 112215377 - protein_coding KNOWN OTTHUMG00000019055.2 65514 9808 49 ENSG00000119913.4 TECTB chr10 112283735 112305035 + protein_coding KNOWN OTTHUMG00000019056.1 21301 2936 14 ENSG00000266472.4 MRPS21 chr1 150293720 150308979 + protein_coding KNOWN OTTHUMG00000012544.4 15260 1641 5 ENSG00000276857.1 MIR6715A chr10 112299612 112299690 + miRNA KNOWN NA 79 79 1 ENSG00000243316.5 GUCY2GP chr10 112308181 112356574 - unitary_pseudogene KNOWN OTTHUMG00000019058.4 48394 3225 32 ENSG00000197142.9 ACSL5 chr10 112374018 112428380 + protein_coding KNOWN OTTHUMG00000019060.1 54363 4236 127 ENSG00000232934.6 RP11-324O2.3 chr10 112395813 112425589 - antisense NOVEL OTTHUMG00000019057.7 29777 3099 25 ENSG00000023041.10 ZDHHC6 chr10 112424428 112446917 - protein_coding KNOWN OTTHUMG00000019062.2 22490 3748 43 ENSG00000151532.12 VTI1A chr10 112446998 112818744 + protein_coding KNOWN OTTHUMG00000019063.2 371747 8408 43 ENSG00000234017.1 RP11-214N15.5 chr10 112548632 112548872 - processed_pseudogene KNOWN OTTHUMG00000019061.1 241 241 1 ENSG00000264763.1 MIR4295 chr10 112634170 112634254 + miRNA KNOWN NA 85 85 1 ENSG00000233340.1 RP11-25C19.3 chr10 112671812 112677819 - antisense NOVEL OTTHUMG00000019064.1 6008 358 3 ENSG00000260917.1 RP11-57H14.4 chr10 112823490 112827726 + sense_overlapping NOVEL OTTHUMG00000176201.1 4237 4237 1 ENSG00000278939.1 AC242988.1 chr1 150302770 150303291 - protein_coding KNOWN NA 522 75 2 ENSG00000279315.1 RP11-57H14.5 chr10 112831169 112832454 + TEC KNOWN OTTHUMG00000176202.1 1286 1286 1 ENSG00000225292.2 RP11-57H14.3 chr10 112888735 112906111 + sense_intronic NOVEL OTTHUMG00000019067.2 17377 315 3 ENSG00000148737.14 TCF7L2 chr10 112950250 113167678 + protein_coding KNOWN OTTHUMG00000019070.6 217429 4935 233 ENSG00000233547.1 RP11-57H14.2 chr10 112950646 112951875 - antisense NOVEL OTTHUMG00000019066.1 1230 460 2 ENSG00000227560.1 RP11-139K1.2 chr10 112987476 112987865 + processed_pseudogene KNOWN OTTHUMG00000019068.1 390 390 1 ENSG00000238380.1 RNU7-165P chr10 113353425 113353484 + snRNA KNOWN NA 60 60 1 ENSG00000230018.1 RP11-481H12.1 chr10 113482616 113483113 + processed_pseudogene KNOWN OTTHUMG00000019071.1 498 498 1 ENSG00000148702.13 HABP2 chr10 113550837 113589602 + protein_coding KNOWN OTTHUMG00000019073.1 38766 3657 28 ENSG00000197893.12 NRAP chr10 113588716 113664127 - protein_coding KNOWN OTTHUMG00000019072.2 75412 5724 166 ENSG00000165806.18 CASP7 chr10 113679162 113730907 + protein_coding KNOWN OTTHUMG00000019076.3 51746 3528 80 ENSG00000117360.11 PRPF3 chr1 150321476 150353195 + protein_coding KNOWN OTTHUMG00000012807.2 31720 5373 47 ENSG00000234393.1 RP11-211N11.5 chr10 113710681 113719332 - antisense NOVEL OTTHUMG00000019075.1 8652 692 3 ENSG00000281294.1 AL592546.1 chr10 113733116 113733234 - miRNA NOVEL NA 119 119 1 ENSG00000148735.13 PLEKHS1 chr10 113751454 113783429 + protein_coding KNOWN OTTHUMG00000019074.2 31976 5402 65 ENSG00000212589.1 SNORA17 chr10 113820459 113820590 + snoRNA NOVEL NA 132 132 1 ENSG00000198924.6 DCLRE1A chr10 113834725 113854383 - protein_coding KNOWN OTTHUMG00000019077.2 19659 4600 21 ENSG00000196865.4 NHLRC2 chr10 113854661 113917194 + protein_coding KNOWN OTTHUMG00000019078.1 62534 11223 13 ENSG00000043591.5 ADRB1 chr10 114044056 114046908 + protein_coding KNOWN OTTHUMG00000019079.1 2853 2853 1 ENSG00000253066.1 RNU6-709P chr10 114111414 114111517 + snRNA KNOWN NA 104 104 1 ENSG00000226582.1 UBE2V1P5 chr10 114117147 114117551 + processed_pseudogene KNOWN OTTHUMG00000019080.1 405 405 1 ENSG00000165813.15 CCDC186 chr10 114120862 114174220 - protein_coding KNOWN OTTHUMG00000019081.1 53359 8991 35 ENSG00000163125.14 RPRD2 chr1 150363091 150476566 + protein_coding KNOWN OTTHUMG00000012808.2 113476 8738 35 ENSG00000273904.1 Hammerhead_HH10 chr10 114168156 114168280 - ribozyme NOVEL NA 125 125 1 ENSG00000238742.1 MIR2110 chr10 114174105 114174179 - miRNA KNOWN NA 75 75 1 ENSG00000095627.8 TDRD1 chr10 114179270 114232304 + protein_coding KNOWN OTTHUMG00000019083.2 53035 5256 75 ENSG00000165816.11 VWA2 chr10 114239330 114291513 + protein_coding KNOWN OTTHUMG00000019082.3 52184 3301 37 ENSG00000230165.1 CTB-1144G6.5 chr10 114246074 114246714 + processed_pseudogene KNOWN OTTHUMG00000019084.1 641 333 2 ENSG00000275024.1 CTB-1144G6.6 chr10 114280725 114281258 - antisense NOVEL OTTHUMG00000186515.1 534 534 1 ENSG00000169129.13 AFAP1L2 chr10 114294824 114404756 - protein_coding KNOWN OTTHUMG00000019086.3 109933 5789 63 ENSG00000242912.3 RN7SL384P chr10 114423770 114424067 - misc_RNA KNOWN NA 298 298 1 ENSG00000279796.1 RP11-317F20.3 chr10 114424445 114427398 - TEC KNOWN OTTHUMG00000176203.1 2954 2954 1 ENSG00000099204.17 ABLIM1 chr10 114431113 114685003 - protein_coding KNOWN OTTHUMG00000019088.6 253891 9871 192 ENSG00000143374.13 TARS2 chr1 150487364 150507609 + protein_coding KNOWN OTTHUMG00000012809.4 20246 4077 124 ENSG00000229668.1 RP11-317F20.2 chr10 114501997 114502347 - processed_pseudogene KNOWN OTTHUMG00000019085.1 351 351 1 ENSG00000275685.1 AL354873.1 chr10 114688011 114688101 - miRNA NOVEL NA 91 91 1 ENSG00000228169.3 PPIAP19 chr10 114690143 114690634 - processed_pseudogene KNOWN OTTHUMG00000019087.1 492 492 1 ENSG00000228484.1 RP11-106M7.1 chr10 114764788 114779903 + lincRNA NOVEL OTTHUMG00000019090.1 15116 2378 3 ENSG00000215760.2 TAF9BP2 chr10 114809375 114811170 + processed_pseudogene KNOWN OTTHUMG00000019091.1 1796 499 2 ENSG00000151553.13 FAM160B1 chr10 114821744 114899832 + protein_coding KNOWN OTTHUMG00000019092.2 78089 6216 40 ENSG00000226428.1 RP11-106M7.4 chr10 114900722 114901366 + processed_pseudogene KNOWN OTTHUMG00000019093.1 645 645 1 ENSG00000165832.5 TRUB1 chr10 114938193 114977676 + protein_coding KNOWN OTTHUMG00000019094.2 39484 3601 12 ENSG00000252611.1 RNU6-1121P chr10 114969460 114969568 - snRNA KNOWN NA 109 109 1 ENSG00000236799.1 RP11-383C6.2 chr10 114994657 114996593 + lincRNA NOVEL OTTHUMG00000019095.1 1937 344 3 ENSG00000143369.13 ECM1 chr1 150508062 150513789 + protein_coding KNOWN OTTHUMG00000012806.2 5728 3360 48 ENSG00000107518.15 ATRNL1 chr10 115093365 115948992 + protein_coding KNOWN OTTHUMG00000019096.9 855628 9824 82 ENSG00000270965.1 RP11-169K19.1 chr10 115819842 115820487 - processed_pseudogene KNOWN OTTHUMG00000184683.1 646 646 1 ENSG00000151892.13 GFRA1 chr10 116056925 116273467 - protein_coding KNOWN OTTHUMG00000019097.3 216543 9678 43 ENSG00000182645.5 CCDC172 chr10 116324428 116380029 + protein_coding KNOWN OTTHUMG00000019098.2 55602 1777 15 ENSG00000205433.4 SNRPGP6 chr10 116409256 116409475 + processed_pseudogene KNOWN OTTHUMG00000019099.1 220 220 1 ENSG00000203837.4 PNLIPRP3 chr10 116427867 116477957 + protein_coding KNOWN OTTHUMG00000019100.1 50091 2354 12 ENSG00000227096.1 HMGB3P8 chr10 116439468 116440044 - processed_pseudogene KNOWN OTTHUMG00000019101.2 577 577 1 ENSG00000200935.1 RNU6-1090P chr10 116538183 116538276 + snRNA KNOWN NA 94 94 1 ENSG00000175535.6 PNLIP chr10 116545931 116567855 + protein_coding KNOWN OTTHUMG00000019103.1 21925 1539 17 ENSG00000232091.1 PNLIPP1 chr10 116577308 116583317 + unprocessed_pseudogene KNOWN OTTHUMG00000019102.1 6010 675 3 ENSG00000252404.1 SCARNA16 chr1 9082696 9082879 + scaRNA NOVEL NA 184 184 1 ENSG00000228126.1 FALEC chr1 150515757 150518032 + lincRNA NOVEL OTTHUMG00000035849.1 2276 566 2 ENSG00000187021.13 PNLIPRP1 chr10 116590385 116609175 + protein_coding KNOWN OTTHUMG00000019109.3 18791 4986 144 ENSG00000266200.5 PNLIPRP2 chr10 116620953 116645143 + polymorphic_pseudogene KNOWN OTTHUMG00000181599.4 24191 1574 51 ENSG00000165863.15 C10orf82 chr10 116663696 116670264 - protein_coding KNOWN OTTHUMG00000019105.2 6569 2411 19 ENSG00000232767.1 RP11-498B4.5 chr10 116670103 116672739 + antisense NOVEL OTTHUMG00000019106.1 2637 778 3 ENSG00000165868.11 HSPA12A chr10 116671192 116742574 - protein_coding KNOWN OTTHUMG00000019107.2 71383 6754 20 ENSG00000228195.2 RPL5P27 chr10 116749905 116751261 + processed_pseudogene KNOWN OTTHUMG00000019108.1 1357 881 2 ENSG00000281599.1 AC023283.1 chr10 116827489 116827564 - miRNA NOVEL NA 76 76 1 ENSG00000225302.2 RP11-539I5.1 chr10 116828761 116850205 - antisense NOVEL OTTHUMG00000019111.2 21445 5012 6 ENSG00000188316.12 ENO4 chr10 116849512 116911788 + protein_coding KNOWN OTTHUMG00000019113.5 62277 3164 51 ENSG00000187164.16 KIAA1598 chr10 116881482 117126586 - protein_coding KNOWN OTTHUMG00000019114.2 245105 8247 101 ENSG00000237781.3 RP11-54A4.2 chr1 150548562 150557724 - antisense NOVEL OTTHUMG00000034864.3 9163 665 6 ENSG00000235742.1 RP11-5G18.2 chr10 117023674 117023851 - processed_pseudogene KNOWN OTTHUMG00000019115.1 178 178 1 ENSG00000148704.11 VAX1 chr10 117128521 117138301 - protein_coding KNOWN OTTHUMG00000019117.4 9781 5788 7 ENSG00000234474.2 MIR3663HG chr10 117158656 117169059 - lincRNA NOVEL OTTHUMG00000019116.2 10404 2385 2 ENSG00000266782.1 MIR3663 chr10 117167678 117167774 - miRNA KNOWN NA 97 97 1 ENSG00000236171.1 RP11-501J20.3 chr10 117196168 117196654 - processed_pseudogene KNOWN OTTHUMG00000019118.1 487 487 1 ENSG00000186795.1 KCNK18 chr10 117197489 117210299 + protein_coding KNOWN OTTHUMG00000019120.2 12811 1155 3 ENSG00000225936.1 RP11-501J20.5 chr10 117239600 117241923 - antisense NOVEL OTTHUMG00000019119.1 2324 744 3 ENSG00000165646.10 SLC18A2 chr10 117241093 117279430 + protein_coding KNOWN OTTHUMG00000019121.1 38338 4125 31 ENSG00000277879.1 RP11-129M16.4 chr10 117267116 117268668 - antisense NOVEL OTTHUMG00000186530.1 1553 1553 1 ENSG00000165650.10 PDZD8 chr10 117277274 117375467 - protein_coding KNOWN OTTHUMG00000019122.2 98194 9881 14 ENSG00000143382.12 ADAMTSL4 chr1 150549369 150560937 + protein_coding KNOWN OTTHUMG00000034863.5 11569 6432 94 ENSG00000258114.1 CTA-109P11.4 chr10 117425194 117490419 + lincRNA NOVEL OTTHUMG00000169985.1 65226 526 3 ENSG00000229847.7 EMX2OS chr10 117473215 117545068 - antisense KNOWN OTTHUMG00000019125.6 71854 8824 19 ENSG00000170370.11 EMX2 chr10 117542444 117549546 + protein_coding KNOWN OTTHUMG00000019123.5 7103 3262 10 ENSG00000235198.1 CTA-109P11.1 chr10 117562084 117572457 - lincRNA NOVEL OTTHUMG00000019124.1 10374 475 3 ENSG00000234952.1 RP11-328K15.1 chr10 117735313 117736407 + lincRNA NOVEL OTTHUMG00000019126.1 1095 244 2 ENSG00000263041.1 RP11-355F22.1 chr10 117825903 117830518 - lincRNA NOVEL OTTHUMG00000177332.1 4616 632 5 ENSG00000107560.9 RAB11FIP2 chr10 118004916 118046603 - protein_coding KNOWN OTTHUMG00000019128.1 41688 6169 16 ENSG00000231104.7 RP11-354M20.3 chr10 118017487 118045810 + antisense NOVEL OTTHUMG00000019129.6 28324 2085 11 ENSG00000177640.14 CASC2 chr10 118046279 118210153 + antisense KNOWN OTTHUMG00000019127.8 163875 10032 28 ENSG00000273672.1 AC022395.1 chr10 118113310 118113418 + miRNA NOVEL NA 109 109 1 ENSG00000264553.1 MIR4257 chr1 150551929 150552014 + miRNA KNOWN NA 86 86 1 ENSG00000238276.4 RP11-245J24.1 chr10 118241564 118267710 + processed_transcript NOVEL OTTHUMG00000019130.1 26147 1054 15 ENSG00000165669.12 FAM204A chr10 118297930 118342328 - protein_coding KNOWN OTTHUMG00000019131.5 44399 15018 54 ENSG00000232139.4 LINC00867 chr10 118357108 118365103 + lincRNA NOVEL OTTHUMG00000019132.1 7996 971 11 ENSG00000234309.1 SLC25A18P1 chr10 118572871 118573620 + processed_pseudogene KNOWN OTTHUMG00000019134.1 750 454 2 ENSG00000119973.4 PRLHR chr10 118589989 118595699 - protein_coding KNOWN OTTHUMG00000019136.2 5711 5446 2 ENSG00000263658.1 AL356865.1 chr10 118630923 118631042 - miRNA NOVEL NA 120 120 1 ENSG00000225155.4 TOMM22P5 chr10 118643760 118644198 + processed_pseudogene KNOWN OTTHUMG00000019135.2 439 439 1 ENSG00000151893.13 CACUL1 chr10 118674167 118755249 - protein_coding KNOWN OTTHUMG00000019138.7 81083 12406 38 ENSG00000277687.1 RP11-427L15.2 chr10 118692361 118693535 - sense_intronic NOVEL OTTHUMG00000186562.1 1175 1175 1 ENSG00000236058.3 RP11-215A21.2 chr10 118872054 118872602 - processed_pseudogene KNOWN OTTHUMG00000019137.1 549 549 1 ENSG00000203804.4 ADAMTSL4-AS1 chr1 150560202 150574552 - processed_transcript KNOWN OTTHUMG00000034866.2 14351 2622 6 ENSG00000213574.2 LDHAP5 chr10 118932674 118933295 - processed_pseudogene KNOWN OTTHUMG00000019139.1 622 622 1 ENSG00000229272.1 RP11-498J9.2 chr10 119003536 119003884 - antisense NOVEL OTTHUMG00000019140.1 349 229 2 ENSG00000215925.1 AL157788.1 chr10 119005790 119005899 + miRNA NOVEL NA 110 110 1 ENSG00000188613.6 NANOS1 chr10 119029716 119033732 + protein_coding KNOWN OTTHUMG00000019141.2 4017 4017 2 ENSG00000107581.11 EIF3A chr10 119033670 119080823 - protein_coding KNOWN OTTHUMG00000019144.3 47154 7101 48 ENSG00000280522.1 AL355598.1 chr10 119060010 119060078 - miRNA NOVEL NA 69 69 1 ENSG00000207468.1 SNORA19 chr10 119060011 119060138 - snoRNA KNOWN NA 128 128 1 ENSG00000222588.1 SNORA19 chr10 119060983 119061111 - snoRNA NOVEL NA 129 129 1 ENSG00000271343.1 RP11-435O11.5 chr10 119093140 119093341 + processed_pseudogene KNOWN OTTHUMG00000184639.1 202 202 1 ENSG00000119979.14 FAM45A chr10 119104086 119137984 + protein_coding KNOWN OTTHUMG00000019143.1 33899 6161 60 ENSG00000277452.1 Metazoa_SRP chr1 150566562 150566860 - misc_RNA NOVEL NA 299 299 1 ENSG00000183605.15 SFXN4 chr10 119140767 119165667 - protein_coding KNOWN OTTHUMG00000019147.5 24901 1868 74 ENSG00000165672.6 PRDX3 chr10 119167703 119178833 - protein_coding KNOWN OTTHUMG00000019146.2 11131 3417 11 ENSG00000198873.11 GRK5 chr10 119207589 119459742 + protein_coding KNOWN OTTHUMG00000019149.3 252154 7000 19 ENSG00000228485.1 GRK5-IT1 chr10 119208531 119211760 + sense_intronic NOVEL OTTHUMG00000019145.1 3230 400 2 ENSG00000242853.3 RN7SL749P chr10 119212857 119213146 + misc_RNA KNOWN NA 290 290 1 ENSG00000236426.4 RP11-79M19.2 chr10 119330233 119336182 - antisense NOVEL OTTHUMG00000019148.4 5950 1524 7 ENSG00000265719.1 MIR4681 chr10 119377972 119378043 + miRNA KNOWN NA 72 72 1 ENSG00000148908.13 RGS10 chr10 119499828 119542708 - protein_coding KNOWN OTTHUMG00000019150.1 42881 1252 19 ENSG00000271353.1 RP11-179H18.8 chr10 119562101 119562530 - processed_pseudogene KNOWN OTTHUMG00000184680.1 430 430 1 ENSG00000151923.16 TIAL1 chr10 119571802 119597029 - protein_coding KNOWN OTTHUMG00000019156.7 25228 7355 95 ENSG00000274963.1 Metazoa_SRP chr1 150568971 150569269 - misc_RNA NOVEL NA 299 299 1 ENSG00000234569.1 RAD1P1 chr10 119621068 119621880 + processed_pseudogene KNOWN OTTHUMG00000019152.1 813 813 1 ENSG00000227437.1 RP11-179H18.5 chr10 119638456 119639082 + processed_pseudogene KNOWN OTTHUMG00000019153.1 627 627 1 ENSG00000151929.8 BAG3 chr10 119651370 119677819 + protein_coding KNOWN OTTHUMG00000019155.1 26450 2747 9 ENSG00000232823.2 TXNP1 chr10 119683127 119683823 - processed_pseudogene KNOWN OTTHUMG00000019154.2 697 371 2 ENSG00000198825.10 INPP5F chr10 119726097 119829278 + protein_coding KNOWN OTTHUMG00000019158.2 103182 6310 34 ENSG00000242818.3 RN7SL846P chr10 119768247 119768538 + misc_RNA KNOWN NA 292 292 1 ENSG00000270300.1 PHACTR2P1 chr10 119815229 119816642 - processed_pseudogene KNOWN OTTHUMG00000184679.1 1414 1414 1 ENSG00000197771.11 MCMBP chr10 119829404 119892556 - protein_coding KNOWN OTTHUMG00000019159.4 63153 6000 57 ENSG00000107651.11 SEC23IP chr10 119892711 119944658 + protein_coding KNOWN OTTHUMG00000019161.2 51948 7867 46 ENSG00000265370.1 MIR4682 chr10 119958513 119958592 + miRNA KNOWN NA 80 80 1 ENSG00000143384.11 MCL1 chr1 150574551 150579738 - protein_coding KNOWN OTTHUMG00000034867.2 5188 4371 11 ENSG00000180230.6 NACAP2 chr10 119997086 119997709 - processed_pseudogene KNOWN OTTHUMG00000019162.1 624 624 1 ENSG00000223455.1 RP11-781P14.3 chr10 120069980 120070159 - processed_pseudogene KNOWN OTTHUMG00000019163.1 180 180 1 ENSG00000221402.1 AL353664.1 chr10 120124132 120124226 - miRNA NOVEL NA 95 95 1 ENSG00000220842.6 RP11-572P18.1 chr10 120354701 120355183 - processed_pseudogene KNOWN OTTHUMG00000019165.2 483 483 1 ENSG00000234522.1 RP11-572P18.2 chr10 120434983 120440376 + unprocessed_pseudogene KNOWN OTTHUMG00000019166.1 5394 876 6 ENSG00000203805.9 PPAPDC1A chr10 120456954 120589855 + protein_coding KNOWN OTTHUMG00000019168.1 132902 1785 23 ENSG00000265239.1 AC073587.1 chr10 120463834 120463931 - miRNA NOVEL NA 98 98 1 ENSG00000177234.7 LINC01561 chr10 120597949 120600124 + lincRNA KNOWN OTTHUMG00000019167.3 2176 2176 2 ENSG00000227165.6 WDR11-AS1 chr10 120761812 120851345 - antisense NOVEL OTTHUMG00000019169.5 89534 4112 21 ENSG00000274461.1 RP11-323P17.2 chr10 120819307 120825311 + processed_transcript NOVEL OTTHUMG00000188117.1 6005 2101 7 ENSG00000253047.1 SNORA40 chr1 150600539 150600659 - snoRNA NOVEL NA 121 121 1 ENSG00000120008.14 WDR11 chr10 120851175 120909524 + protein_coding KNOWN OTTHUMG00000019171.4 58350 10837 152 ENSG00000271670.1 RP11-95I16.4 chr10 120879256 120880667 - antisense NOVEL OTTHUMG00000184250.1 1412 625 2 ENSG00000227307.1 RP11-95I16.2 chr10 120925547 120980700 - lincRNA NOVEL OTTHUMG00000019170.1 55154 943 2 ENSG00000278484.1 RP11-95I16.6 chr10 120984966 120985596 - lincRNA NOVEL OTTHUMG00000186563.1 631 631 1 ENSG00000236762.1 RP11-159H3.1 chr10 121133090 121133723 - processed_pseudogene KNOWN OTTHUMG00000019172.2 634 588 2 ENSG00000227143.1 LINC01153 chr10 121178700 121185966 + lincRNA NOVEL OTTHUMG00000019173.1 7267 2864 2 ENSG00000222979.1 RN7SKP167 chr10 121410916 121411200 + misc_RNA KNOWN NA 285 285 1 ENSG00000066468.19 FGFR2 chr10 121478334 121598458 - protein_coding KNOWN OTTHUMG00000019175.9 120125 7486 309 ENSG00000223432.1 RP11-62L18.3 chr10 121615425 121615839 - lincRNA NOVEL OTTHUMG00000019174.1 415 310 2 ENSG00000223540.1 RPS15AP5 chr10 121713607 121713994 + processed_pseudogene KNOWN OTTHUMG00000019176.1 388 388 1 ENSG00000143420.16 ENSA chr1 150600851 150629612 - protein_coding KNOWN OTTHUMG00000035004.4 28762 5493 51 ENSG00000224250.1 RP11-78A18.2 chr10 121736303 121739730 + antisense NOVEL OTTHUMG00000019177.1 3428 299 3 ENSG00000107669.16 ATE1 chr10 121740421 121928801 - protein_coding KNOWN OTTHUMG00000019178.1 188381 5720 80 ENSG00000201884.1 Y_RNA chr10 121846600 121846700 + misc_RNA NOVEL NA 101 101 1 ENSG00000226864.1 ATE1-AS1 chr10 121928312 121951965 + antisense NOVEL OTTHUMG00000019179.1 23654 951 2 ENSG00000273767.1 ZNRD1-AS1_2 chr10 121949412 121949487 - misc_RNA NOVEL NA 76 76 1 ENSG00000276742.1 RP11-500G22.4 chr10 121956782 121957098 + antisense NOVEL OTTHUMG00000186564.1 317 317 1 ENSG00000107672.13 NSMCE4A chr10 121957088 121975217 - protein_coding KNOWN OTTHUMG00000019180.1 18130 3546 62 ENSG00000273891.1 RP11-500G22.5 chr10 121965764 121967700 + antisense NOVEL OTTHUMG00000186565.1 1937 1937 1 ENSG00000138162.16 TACC2 chr10 121989174 122254545 + protein_coding KNOWN OTTHUMG00000019181.5 265372 18835 320 ENSG00000138152.8 BTBD16 chr10 122271306 122338162 + protein_coding KNOWN OTTHUMG00000019182.4 66857 2406 22 ENSG00000281506.1 AL158048.1 chr1 9082803 9082880 + miRNA NOVEL NA 78 78 1 ENSG00000276103.1 U4 chr1 150608507 150608623 - snRNA NOVEL NA 117 117 1 ENSG00000202245.1 RNU6-728P chr10 122345690 122345793 + snRNA KNOWN NA 104 104 1 ENSG00000107679.13 PLEKHA1 chr10 122374696 122442602 + protein_coding KNOWN OTTHUMG00000019184.6 67907 23986 77 ENSG00000265442.1 MIR3941 chr10 122416965 122417067 + miRNA KNOWN NA 103 103 1 ENSG00000254636.1 ARMS2 chr10 122454653 122457352 + protein_coding KNOWN OTTHUMG00000048232.2 2700 818 2 ENSG00000166033.10 HTRA1 chr10 122461525 122514908 + protein_coding KNOWN OTTHUMG00000019186.2 53384 2120 15 ENSG00000187908.14 DMBT1 chr10 122560665 122643736 + protein_coding KNOWN OTTHUMG00000019185.2 83072 8073 368 ENSG00000183559.10 C10orf120 chr10 122697709 122699822 - protein_coding KNOWN OTTHUMG00000019187.1 2114 1064 7 ENSG00000274087.1 RP11-318C4.3 chr10 122729455 122729740 + unprocessed_pseudogene KNOWN OTTHUMG00000187860.1 286 286 1 ENSG00000176584.14 DMBT1P1 chr10 122756694 122799180 + transcribed_processed_pseudogene KNOWN OTTHUMG00000185790.1 42487 4155 36 ENSG00000272135.4 RP11-107C16.2 chr10 122818816 122826449 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000019188.3 7634 1144 8 ENSG00000143457.9 GOLPH3L chr1 150646225 150697144 - protein_coding KNOWN OTTHUMG00000035009.2 50920 3329 13 ENSG00000138161.11 CUZD1 chr10 122832149 122850793 - protein_coding KNOWN OTTHUMG00000019195.4 18645 3464 53 ENSG00000213185.5 FAM24B chr10 122849078 122879641 - protein_coding KNOWN OTTHUMG00000019194.1 30564 1177 13 ENSG00000255624.2 RP11-564D11.3 chr10 122879851 122898024 + transcribed_processed_pseudogene KNOWN OTTHUMG00000019189.2 18174 1328 8 ENSG00000203795.2 FAM24A chr10 122910701 122913111 + protein_coding KNOWN OTTHUMG00000019193.1 2411 596 3 ENSG00000119965.11 C10orf88 chr10 122930903 122954403 - protein_coding KNOWN OTTHUMG00000019190.2 23501 3173 18 ENSG00000179988.12 PSTK chr10 122954381 122997513 + protein_coding KNOWN OTTHUMG00000019191.2 43133 6118 47 ENSG00000095574.10 IKZF5 chr10 122990806 123008817 - protein_coding KNOWN OTTHUMG00000019192.2 18012 4934 20 ENSG00000196177.11 ACADSB chr10 123008979 123058311 + protein_coding KNOWN OTTHUMG00000019200.4 49333 6255 27 ENSG00000188620.9 HMX3 chr10 123135962 123137741 + protein_coding KNOWN OTTHUMG00000019199.4 1780 1173 2 ENSG00000188816.3 HMX2 chr10 123148122 123150672 + protein_coding KNOWN OTTHUMG00000019198.1 2551 1628 2 ENSG00000143452.14 HORMAD1 chr1 150698060 150720888 - protein_coding KNOWN OTTHUMG00000035005.1 22829 2405 75 ENSG00000154473.16 BUB3 chr10 123154277 123170467 + protein_coding KNOWN OTTHUMG00000019197.3 16191 8300 29 ENSG00000227586.5 RP11-162A23.5 chr10 123171535 123171875 - processed_pseudogene KNOWN OTTHUMG00000019196.1 341 341 1 ENSG00000270902.1 RP11-338O1.3 chr10 123323422 123323586 - processed_pseudogene KNOWN OTTHUMG00000184678.1 165 165 1 ENSG00000230131.4 RP11-282I1.1 chr10 123356450 123517708 + lincRNA NOVEL OTTHUMG00000019202.1 161259 1245 7 ENSG00000225152.1 RP11-338O1.2 chr10 123425713 123427640 - lincRNA NOVEL OTTHUMG00000019201.1 1928 416 2 ENSG00000234542.1 RP11-282I1.2 chr10 123574227 123583767 + lincRNA NOVEL OTTHUMG00000019203.1 9541 438 3 ENSG00000154478.3 GPR26 chr10 123666355 123694607 + protein_coding KNOWN OTTHUMG00000019204.1 28253 7514 3 ENSG00000121898.11 CPXM2 chr10 123706207 123940267 - protein_coding KNOWN OTTHUMG00000019206.2 234061 4859 51 ENSG00000221293.2 AC009987.1 chr10 123734785 123734856 - miRNA NOVEL NA 72 72 1 ENSG00000231138.1 RP11-391M7.3 chr10 123776670 123777749 + antisense NOVEL OTTHUMG00000019205.1 1080 806 2 ENSG00000206931.1 RNU6-1042P chr1 150701866 150701972 + snRNA KNOWN NA 107 107 1 ENSG00000221437.1 AC068058.1 chr10 123911479 123911561 - miRNA NOVEL NA 83 83 1 ENSG00000234677.1 RP11-285A18.2 chr10 123913574 123931597 - sense_intronic NOVEL OTTHUMG00000019207.1 18024 389 3 ENSG00000213438.2 YBX2P1 chr10 123991910 123992669 + processed_pseudogene KNOWN OTTHUMG00000019210.1 760 760 1 ENSG00000232334.1 RP11-47G11.2 chr10 124004304 124004828 - processed_pseudogene KNOWN OTTHUMG00000019209.1 525 525 1 ENSG00000182022.16 CHST15 chr10 124007666 124093607 - protein_coding KNOWN OTTHUMG00000019208.2 85942 6554 26 ENSG00000065154.10 OAT chr10 124397303 124418976 - protein_coding KNOWN OTTHUMG00000019213.1 21674 3388 44 ENSG00000229544.8 NKX1-2 chr10 124445239 124450184 - protein_coding KNOWN OTTHUMG00000185174.8 4946 3364 2 ENSG00000271434.3 RP13-238F13.3 chr10 124447152 124450048 + processed_transcript NOVEL OTTHUMG00000019211.12 2897 1638 4 ENSG00000107902.12 LHPP chr10 124461834 124617888 + protein_coding KNOWN OTTHUMG00000019214.1 156055 4064 34 ENSG00000229455.2 RPS10P18 chr10 124489823 124490578 - processed_pseudogene KNOWN OTTHUMG00000019212.3 756 495 2 ENSG00000163131.9 CTSS chr1 150730196 150765957 - protein_coding KNOWN OTTHUMG00000035010.2 35762 4228 31 ENSG00000258539.1 RP11-12J10.3 chr10 124617080 124791727 - protein_coding NOVEL OTTHUMG00000171144.1 174648 3422 10 ENSG00000189319.12 FAM53B chr10 124619292 124744269 - protein_coding KNOWN OTTHUMG00000019215.2 124978 6424 15 ENSG00000278831.1 RP11-12J10.4 chr10 124623353 124624079 + antisense NOVEL OTTHUMG00000186568.1 727 727 1 ENSG00000233334.3 FAM53B-AS1 chr10 124703625 124714217 + antisense NOVEL OTTHUMG00000019216.3 10593 1760 7 ENSG00000203791.12 METTL10 chr10 124748149 124791870 - protein_coding KNOWN OTTHUMG00000019217.4 43722 4225 36 ENSG00000199466.1 Y_RNA chr10 124766196 124766297 + misc_RNA NOVEL NA 102 102 1 ENSG00000165660.7 FAM175B chr10 124801785 124836670 + protein_coding KNOWN OTTHUMG00000019218.2 34886 2992 9 ENSG00000207494.1 Y_RNA chr10 124814958 124815062 - misc_RNA NOVEL NA 105 105 1 ENSG00000214807.2 NPM1P31 chr10 124867510 124868326 + processed_pseudogene KNOWN OTTHUMG00000019219.1 817 764 2 ENSG00000249456.1 RP11-298J20.4 chr10 124917143 124942881 + sense_overlapping NOVEL OTTHUMG00000019222.1 25739 555 2 ENSG00000236713.1 RP11-363I22.3 chr1 150780272 150780644 + processed_pseudogene KNOWN OTTHUMG00000035006.1 373 373 1 ENSG00000019995.6 ZRANB1 chr10 124942123 124988189 + protein_coding KNOWN OTTHUMG00000019223.1 46067 5993 12 ENSG00000226899.1 RP11-298J20.3 chr10 124945204 124946432 - antisense NOVEL OTTHUMG00000019221.1 1229 830 2 ENSG00000175029.15 CTBP2 chr10 124984317 125161170 - protein_coding KNOWN OTTHUMG00000019224.6 176854 10946 89 ENSG00000273599.1 RP11-59C5.3 chr10 124996064 125001491 + antisense NOVEL OTTHUMG00000186571.1 5428 5428 1 ENSG00000264572.1 MIR4296 chr10 125032783 125032870 - miRNA KNOWN NA 88 88 1 ENSG00000214298.3 MRPS21P6 chr10 125166677 125166937 + processed_pseudogene KNOWN OTTHUMG00000019225.1 261 261 1 ENSG00000281698.1 Metazoa_SRP chr10 125173745 125173986 + misc_RNA NOVEL NA 242 242 1 ENSG00000233135.1 RPS27P18 chr10 125473686 125473932 - unprocessed_pseudogene KNOWN OTTHUMG00000019226.1 247 247 1 ENSG00000237675.4 TEX36-AS1 chr10 125574371 125578445 + antisense NOVEL OTTHUMG00000019227.1 4075 749 8 ENSG00000175018.11 TEX36 chr10 125576522 125683144 - protein_coding KNOWN OTTHUMG00000019229.3 106623 1308 12 ENSG00000143387.11 CTSK chr1 150796208 150808323 - protein_coding KNOWN OTTHUMG00000035008.2 12116 1887 16 ENSG00000214297.3 ALDOAP2 chr10 125666875 125667950 - processed_pseudogene KNOWN OTTHUMG00000019228.2 1076 1076 1 ENSG00000228021.6 RP11-383C5.3 chr10 125683229 125709677 + processed_transcript NOVEL OTTHUMG00000019230.5 26449 4558 41 ENSG00000224023.9 FLJ37035 chr10 125700436 125719566 - lincRNA NOVEL OTTHUMG00000019231.4 19131 3432 21 ENSG00000280561.1 RP11-383C5.8 chr10 125707416 125749525 - antisense NOVEL OTTHUMG00000019234.4 42110 565 3 ENSG00000234134.1 RP11-383C5.5 chr10 125718771 125719365 - sense_intronic NOVEL OTTHUMG00000019232.1 595 300 2 ENSG00000107938.16 EDRF1 chr10 125719515 125764143 + protein_coding KNOWN OTTHUMG00000019233.6 44629 7741 175 ENSG00000236991.5 EDRF1-AS1 chr10 125725634 125752110 - antisense NOVEL OTTHUMG00000189700.1 26477 1989 66 ENSG00000154485.4 MMP21 chr10 125766453 125775821 - protein_coding KNOWN OTTHUMG00000019235.1 9369 1919 7 ENSG00000188690.11 UROS chr10 125784980 125823248 - protein_coding KNOWN OTTHUMG00000019236.4 38269 6643 69 ENSG00000265092.1 MIR4484 chr10 125819740 125819822 + miRNA KNOWN NA 83 83 1 ENSG00000224690.2 UBE2D3P3 chr1 150800473 150801031 + processed_pseudogene KNOWN OTTHUMG00000035007.2 559 425 2 ENSG00000107949.15 BCCIP chr10 125823546 125853695 + protein_coding KNOWN OTTHUMG00000019237.2 30150 4498 30 ENSG00000089876.10 DHX32 chr10 125836337 125896436 - protein_coding KNOWN OTTHUMG00000019238.2 60100 3948 22 ENSG00000215972.1 AL360176.1 chr10 125842944 125843029 + miRNA NOVEL NA 86 86 1 ENSG00000277371.1 Metazoa_SRP chr10 125869295 125869576 + misc_RNA NOVEL NA 282 282 1 ENSG00000222629.1 RNU2-42P chr10 125890566 125890678 - snRNA KNOWN NA 113 113 1 ENSG00000203780.9 FANK1 chr10 125896539 126009592 + protein_coding KNOWN OTTHUMG00000019241.3 113054 3384 71 ENSG00000234016.1 GNG10P1 chr10 125960208 125960406 - processed_pseudogene KNOWN OTTHUMG00000019240.1 199 199 1 ENSG00000233409.1 FANK1-AS1 chr10 125972188 125973126 - antisense NOVEL OTTHUMG00000019239.1 939 428 3 ENSG00000148848.13 ADAM12 chr10 126012381 126388455 - protein_coding KNOWN OTTHUMG00000019243.2 376075 9860 63 ENSG00000222740.1 RNA5SP328 chr10 126145474 126145582 - rRNA KNOWN NA 109 109 1 ENSG00000143437.19 ARNT chr1 150809705 150876768 - protein_coding KNOWN OTTHUMG00000035011.3 67064 6516 136 ENSG00000213170.3 RP11-81B10.2 chr10 126272818 126273411 + processed_pseudogene KNOWN OTTHUMG00000019242.1 594 594 1 ENSG00000277259.1 AL589787.1 chr10 126387727 126387782 - miRNA NOVEL NA 56 56 1 ENSG00000235180.1 LINC00601 chr10 126413869 126421879 - lincRNA NOVEL OTTHUMG00000019244.1 8011 1168 4 ENSG00000154493.16 C10orf90 chr10 126424997 126670446 - protein_coding KNOWN OTTHUMG00000019245.4 245450 5255 51 ENSG00000221717.1 AL583860.1 chr10 126556963 126557064 - miRNA NOVEL NA 102 102 1 ENSG00000199321.1 SNORD60 chr10 126779702 126779774 - snoRNA NOVEL NA 73 73 1 ENSG00000150760.11 DOCK1 chr10 126905409 127452517 + protein_coding KNOWN OTTHUMG00000019249.4 547109 8142 117 ENSG00000223528.6 RP11-223P11.3 chr10 126988095 127026507 - antisense NOVEL OTTHUMG00000019247.5 38413 4231 42 ENSG00000232935.2 RP11-223P11.2 chr10 127013501 127026475 - antisense NOVEL OTTHUMG00000019246.2 12975 750 4 ENSG00000188916.7 FAM196A chr10 127135426 127196158 - protein_coding KNOWN OTTHUMG00000019248.2 60733 4407 14 ENSG00000200175.1 RNU6-1309P chr1 150812591 150812698 - snRNA KNOWN NA 108 108 1 ENSG00000214285.2 NPS chr10 127549369 127552639 + protein_coding KNOWN OTTHUMG00000188145.1 3271 270 3 ENSG00000279725.1 RP11-288A5.2 chr10 127734562 127736996 - TEC KNOWN OTTHUMG00000186887.1 2435 2435 1 ENSG00000186766.7 FOXI2 chr10 127737235 127741186 + protein_coding KNOWN OTTHUMG00000019250.2 3952 3217 2 ENSG00000270778.1 BUB1P1 chr10 127867881 127868487 + processed_pseudogene KNOWN OTTHUMG00000184638.1 607 607 1 ENSG00000180745.4 CLRN3 chr10 127877841 127892947 - protein_coding KNOWN OTTHUMG00000019253.1 15107 1152 3 ENSG00000132334.15 PTPRE chr10 127907061 128085855 + protein_coding KNOWN OTTHUMG00000019254.2 178795 11235 100 ENSG00000232259.1 RP11-4C20.3 chr10 127929376 127934517 - lincRNA NOVEL OTTHUMG00000019251.1 5142 748 2 ENSG00000227076.1 RP11-4C20.4 chr10 127934698 127936167 + sense_intronic NOVEL OTTHUMG00000019252.1 1470 371 2 ENSG00000148773.11 MKI67 chr10 128096659 128126385 - protein_coding KNOWN OTTHUMG00000019255.1 29727 12807 55 ENSG00000280953.1 LINC01163 chr10 128181032 128317726 + lincRNA KNOWN OTTHUMG00000189527.1 136695 3190 11 ENSG00000180758.11 GPR157 chr1 9100305 9129170 - protein_coding KNOWN OTTHUMG00000001758.4 28866 5372 8 ENSG00000224800.1 RP11-235D19.2 chr1 150881236 150881683 - processed_pseudogene KNOWN OTTHUMG00000035012.1 448 448 1 ENSG00000234640.1 RP11-264E18.1 chr10 128316282 128320214 - lincRNA NOVEL OTTHUMG00000019256.1 3933 346 2 ENSG00000224190.1 RP11-442O18.2 chr10 128912879 128916271 + lincRNA NOVEL OTTHUMG00000019258.1 3393 450 5 ENSG00000232985.1 RP11-442O18.1 chr10 128958772 128960062 - lincRNA NOVEL OTTHUMG00000019257.1 1291 375 3 ENSG00000275089.1 AL355537.1 chr10 129053003 129053052 - miRNA NOVEL NA 50 50 1 ENSG00000225424.1 RP11-168C9.1 chr10 129278251 129291722 + lincRNA NOVEL OTTHUMG00000019260.1 13472 475 2 ENSG00000170430.9 MGMT chr10 129467184 129768007 + protein_coding KNOWN OTTHUMG00000019261.3 300824 3557 14 ENSG00000266061.1 AL355531.1 chr10 129487869 129487982 + miRNA NOVEL NA 114 114 1 ENSG00000237224.4 RP11-109A6.2 chr10 129693722 129702117 - antisense NOVEL OTTHUMG00000019262.5 8396 2345 13 ENSG00000227374.1 RP11-109A6.3 chr10 129768844 129769435 + lincRNA NOVEL OTTHUMG00000019263.1 592 495 2 ENSG00000108001.12 EBF3 chr10 129835283 129963841 - protein_coding KNOWN OTTHUMG00000019265.3 128559 4623 37 ENSG00000229357.1 CYCSP51 chr1 150903896 150904213 + processed_pseudogene KNOWN OTTHUMG00000035013.1 318 318 1 ENSG00000275327.1 RP11-234G16.4 chr10 129837505 129837794 + antisense NOVEL OTTHUMG00000186589.1 290 290 1 ENSG00000266676.1 MIR4297 chr10 129843299 129843374 - miRNA KNOWN NA 76 76 1 ENSG00000275005.1 RP11-234G16.5 chr10 129845328 129845895 + antisense NOVEL OTTHUMG00000186590.1 568 568 1 ENSG00000237489.2 LINC00959 chr10 130066374 130110817 - lincRNA NOVEL OTTHUMG00000019268.1 44444 2843 6 ENSG00000277218.1 RP11-500G10.5 chr10 130104569 130104998 - lincRNA NOVEL OTTHUMG00000186596.1 430 430 1 ENSG00000233122.2 CTAGE7P chr10 130106046 130108481 + processed_pseudogene KNOWN OTTHUMG00000019269.3 2436 2436 1 ENSG00000233319.1 PPIAP32 chr10 130131770 130132241 - processed_pseudogene KNOWN OTTHUMG00000019270.2 472 472 1 ENSG00000108010.10 GLRX3 chr10 130136399 130184521 + protein_coding KNOWN OTTHUMG00000019267.4 48123 5173 43 ENSG00000276375.1 RP11-339B9.1 chr10 130282445 130286604 - unprocessed_pseudogene KNOWN OTTHUMG00000187866.1 4160 2055 3 ENSG00000236303.2 RP11-540N6.1 chr10 130439067 130483154 + lincRNA NOVEL OTTHUMG00000019273.2 44088 297 2 ENSG00000143379.11 SETDB1 chr1 150926263 150964744 + protein_coding KNOWN OTTHUMG00000035003.6 38482 7093 133 ENSG00000222997.1 Y_RNA chr10 130505106 130505201 + misc_RNA NOVEL NA 96 96 1 ENSG00000264803.1 MIR378C chr10 130962588 130962668 - miRNA KNOWN NA 81 81 1 ENSG00000266057.1 AL607076.1 chr10 130995306 130995387 - miRNA NOVEL NA 82 82 1 ENSG00000176769.9 TCERG1L chr10 131092391 131311721 - protein_coding KNOWN OTTHUMG00000019276.3 219331 5258 24 ENSG00000230098.1 TCERG1L-AS1 chr10 131095218 131095777 + antisense NOVEL OTTHUMG00000019275.1 560 472 2 ENSG00000189275.3 LINC01164 chr10 131772398 131790199 - lincRNA KNOWN OTTHUMG00000186599.1 17802 3384 5 ENSG00000280446.1 XX-FYM637E10_5.1 chr10 131831910 131833508 - TEC KNOWN OTTHUMG00000176205.2 1599 1599 1 ENSG00000175470.17 PPP2R2D chr10 131900644 131959834 + protein_coding KNOWN OTTHUMG00000019277.4 59191 7756 48 ENSG00000176171.10 BNIP3 chr10 131966455 131981931 - protein_coding KNOWN OTTHUMG00000019278.2 15477 4847 11 ENSG00000277959.1 RP11-45A17.2 chr10 131971202 131971533 + antisense NOVEL OTTHUMG00000186601.1 332 332 1 ENSG00000143418.18 CERS2 chr1 150960583 150975004 - protein_coding KNOWN OTTHUMG00000035064.7 14422 4644 105 ENSG00000273521.1 RP11-45A17.4 chr10 131980240 131981337 + antisense NOVEL OTTHUMG00000186612.1 1098 1098 1 ENSG00000279982.1 RP11-45A17.3 chr10 131996738 131999846 + TEC KNOWN OTTHUMG00000186608.1 3109 3109 1 ENSG00000188385.10 JAKMIP3 chr10 132104671 132184809 + protein_coding KNOWN OTTHUMG00000150167.3 80139 7608 38 ENSG00000235010.1 RP11-140A10.3 chr10 132181225 132185962 - antisense NOVEL OTTHUMG00000019281.1 4738 798 6 ENSG00000151640.11 DPYSL4 chr10 132186900 132205776 + protein_coding KNOWN OTTHUMG00000019283.2 18877 3176 36 ENSG00000165752.15 STK32C chr10 132207492 132331847 - protein_coding KNOWN OTTHUMG00000019285.8 124356 3543 45 ENSG00000148814.16 LRRC27 chr10 132332154 132379918 + protein_coding KNOWN OTTHUMG00000019284.4 47765 9910 94 ENSG00000171813.12 PWWP2B chr10 132397168 132417863 + protein_coding KNOWN OTTHUMG00000019286.4 20696 2651 6 ENSG00000231705.1 RP11-432J24.2 chr10 132419083 132420953 + lincRNA NOVEL OTTHUMG00000019287.1 1871 297 2 ENSG00000234311.1 RP11-432J24.3 chr10 132433733 132441484 - antisense NOVEL OTTHUMG00000019288.1 7752 1013 2 ENSG00000259357.2 RP11-316M1.12 chr1 150965245 150966256 + antisense NOVEL OTTHUMG00000172567.2 1012 778 4 ENSG00000180066.8 C10orf91 chr10 132444327 132449408 + lincRNA KNOWN OTTHUMG00000019289.3 5082 2040 10 ENSG00000226900.1 RP11-432J24.5 chr10 132511626 132518191 - lincRNA NOVEL OTTHUMG00000019290.1 6566 634 2 ENSG00000229081.1 LINC01165 chr10 132520827 132522449 - antisense NOVEL OTTHUMG00000019291.1 1623 1623 1 ENSG00000068383.17 INPP5A chr10 132537820 132783480 + protein_coding KNOWN OTTHUMG00000019293.5 245661 3706 60 ENSG00000148826.8 NKX6-2 chr10 132783179 132786052 - protein_coding KNOWN OTTHUMG00000019294.4 2874 2675 5 ENSG00000171811.11 CFAP46 chr10 132808392 132942823 - protein_coding KNOWN OTTHUMG00000019292.6 134432 10561 95 ENSG00000232903.2 LINC01166 chr10 132943967 132965289 - lincRNA NOVEL OTTHUMG00000019299.1 21323 2619 2 ENSG00000224758.1 LINC01167 chr10 132961340 132962237 - lincRNA NOVEL OTTHUMG00000019300.1 898 604 2 ENSG00000240707.2 LINC01168 chr10 132965534 132976354 + lincRNA NOVEL OTTHUMG00000157745.2 10821 5254 3 ENSG00000197177.14 GPR123 chr10 133070929 133131675 + protein_coding KNOWN OTTHUMG00000019304.5 60747 6503 27 ENSG00000231073.1 RP11-316M1.3 chr1 150973123 150975534 + antisense NOVEL OTTHUMG00000035065.1 2412 368 3 ENSG00000256925.2 GPR123-AS1 chr10 133083073 133088491 - antisense NOVEL OTTHUMG00000019301.3 5419 5419 4 ENSG00000238766.2 AL445199.1 chr10 133120003 133120074 + miRNA NOVEL NA 72 72 1 ENSG00000235264.1 RPL5P28 chr10 133144612 133145304 - processed_pseudogene KNOWN OTTHUMG00000019305.1 693 693 1 ENSG00000171798.16 KNDC1 chr10 133160447 133226412 + protein_coding KNOWN OTTHUMG00000019303.6 65966 7985 60 ENSG00000171794.3 UTF1 chr10 133230274 133231558 + protein_coding KNOWN OTTHUMG00000019302.1 1285 1157 2 ENSG00000151650.7 VENTX chr10 133237404 133241929 + protein_coding KNOWN OTTHUMG00000019307.4 4526 2911 3 ENSG00000166917.8 MIR202HG chr10 133246478 133247891 - antisense NOVEL OTTHUMG00000170605.1 1414 822 5 ENSG00000278352.1 MIR202 chr10 133247511 133247620 - miRNA KNOWN NA 110 110 1 ENSG00000273980.1 RP13-49I15.6 chr10 133257144 133257551 - lincRNA NOVEL OTTHUMG00000186614.1 408 408 1 ENSG00000151651.14 ADAM8 chr10 133262403 133276868 - protein_coding KNOWN OTTHUMG00000019309.5 14466 4780 111 ENSG00000143412.8 ANXA9 chr1 150982017 150995634 + protein_coding KNOWN OTTHUMG00000035063.2 13618 1826 19 ENSG00000130640.12 TUBGCP2 chr10 133278630 133312337 - protein_coding KNOWN OTTHUMG00000019319.6 33708 7697 112 ENSG00000235245.1 RP11-122K13.12 chr10 133295187 133295977 - antisense NOVEL OTTHUMG00000046186.1 791 626 3 ENSG00000198546.13 ZNF511 chr10 133308475 133313162 + protein_coding KNOWN OTTHUMG00000019317.2 4688 2728 19 ENSG00000165828.12 PRAP1 chr10 133309410 133352683 + protein_coding KNOWN OTTHUMG00000019312.2 43274 1478 18 ENSG00000130643.7 CALY chr10 133324072 133336935 - protein_coding KNOWN OTTHUMG00000019310.2 12864 3010 18 ENSG00000230306.1 BANF1P2 chr10 133344643 133344906 - processed_pseudogene KNOWN OTTHUMG00000019314.1 264 264 1 ENSG00000226699.1 RP11-122K13.7 chr10 133345754 133350726 - antisense NOVEL OTTHUMG00000019313.1 4973 184 2 ENSG00000148803.10 FUOM chr10 133355154 133358035 - protein_coding KNOWN OTTHUMG00000019315.3 2882 1284 32 ENSG00000127884.4 ECHS1 chr10 133362480 133373689 - protein_coding KNOWN OTTHUMG00000019320.1 11210 1617 8 ENSG00000265395.1 MIR3944 chr10 133371556 133371663 - miRNA KNOWN NA 108 108 1 ENSG00000143409.14 FAM63A chr1 150996086 151008375 - protein_coding KNOWN OTTHUMG00000035061.7 12290 3792 61 ENSG00000274685.1 RP11-122K13.15 chr10 133374736 133374869 - lincRNA NOVEL OTTHUMG00000186617.1 134 134 1 ENSG00000148832.13 PAOX chr10 133379234 133391694 + protein_coding KNOWN OTTHUMG00000019318.4 12461 2277 53 ENSG00000254536.1 RP11-108K14.8 chr10 133390834 133420495 + protein_coding KNOWN OTTHUMG00000019323.2 29662 1605 12 ENSG00000148824.17 MTG1 chr10 133394094 133421307 + protein_coding KNOWN OTTHUMG00000166564.3 27214 4095 67 ENSG00000203772.7 SPRN chr10 133420666 133424572 - protein_coding KNOWN OTTHUMG00000019324.2 3907 3128 2 ENSG00000273327.1 OR6L2P chr10 133430394 133431318 - unprocessed_pseudogene KNOWN OTTHUMG00000185916.1 925 925 1 ENSG00000214279.11 SCART1 chr10 133453928 133523558 + unitary_pseudogene KNOWN OTTHUMG00000019326.4 69631 8015 43 ENSG00000273336.1 OR7M1P chr10 133481238 133481770 + unprocessed_pseudogene KNOWN OTTHUMG00000185917.1 533 533 1 ENSG00000266547.1 AL161645.1 chr10 133497551 133497636 - miRNA NOVEL NA 86 86 1 ENSG00000130649.8 CYP2E1 chr10 133520406 133561220 + protein_coding KNOWN OTTHUMG00000019322.3 40815 9621 60 ENSG00000143363.14 PRUNE chr1 151008420 151035713 + protein_coding KNOWN OTTHUMG00000035062.1 27294 3063 57 ENSG00000278518.1 RP11-108K14.12 chr10 133526259 133527513 - antisense NOVEL OTTHUMG00000186621.1 1255 1255 1 ENSG00000171772.14 SYCE1 chr10 133553901 133569835 - protein_coding KNOWN OTTHUMG00000019321.2 15935 4070 52 ENSG00000233685.1 OR6L1P chr10 133575122 133576031 - unprocessed_pseudogene KNOWN OTTHUMG00000019327.1 910 910 1 ENSG00000225899.6 FRG2B chr10 133623895 133626795 - protein_coding KNOWN OTTHUMG00000019328.2 2901 2097 8 ENSG00000213543.2 RARRES2P2 chr10 133637408 133637892 - processed_pseudogene KNOWN OTTHUMG00000019329.1 485 485 1 ENSG00000233435.1 AGGF1P2 chr10 133642086 133642894 + processed_pseudogene KNOWN OTTHUMG00000019330.1 809 809 1 ENSG00000230468.1 CLUHP5 chr10 133657235 133660635 - unprocessed_pseudogene KNOWN OTTHUMG00000019331.1 3401 774 8 ENSG00000221108.1 AL845259.1 chr10 133659580 133659675 - miRNA NOVEL NA 96 96 1 ENSG00000279626.1 XX-2136C77.2 chr10 133664429 133665106 + unprocessed_pseudogene KNOWN OTTHUMG00000189291.1 678 678 1 ENSG00000278452.1 AL845259.8 chr10 133665202 133665285 + miRNA NOVEL NA 84 84 1 ENSG00000200759.1 RNU6-884P chr1 151022746 151022852 - snRNA KNOWN NA 107 107 1 ENSG00000280337.1 XX-2136C77.3 chr10 133667151 133668419 + unprocessed_pseudogene KNOWN OTTHUMG00000189292.1 1269 1269 1 ENSG00000274241.1 AL845259.4 chr10 133668512 133668595 + miRNA NOVEL NA 84 84 1 ENSG00000274599.2 XX-2136C77.4 chr10 133670450 133671718 + unprocessed_pseudogene KNOWN OTTHUMG00000189293.1 1269 1269 1 ENSG00000276499.1 AL845259.7 chr10 133671811 133671894 + miRNA NOVEL NA 84 84 1 ENSG00000276964.1 DUX4L23 chr10 133673749 133675017 + unprocessed_pseudogene KNOWN OTTHUMG00000189294.1 1269 1269 1 ENSG00000275883.1 AL845259.6 chr10 133675110 133675193 + miRNA NOVEL NA 84 84 1 ENSG00000277274.1 DUX4L22 chr10 133677059 133678327 + unprocessed_pseudogene KNOWN OTTHUMG00000189295.1 1269 1269 1 ENSG00000274014.1 AL845259.3 chr10 133678420 133678503 + miRNA NOVEL NA 84 84 1 ENSG00000275610.1 DUX4L21 chr10 133680369 133681637 + unprocessed_pseudogene KNOWN OTTHUMG00000189296.1 1269 1269 1 ENSG00000275292.1 AL845259.5 chr10 133681730 133681813 + miRNA NOVEL NA 84 84 1 ENSG00000207865.1 MIR34A chr1 9151668 9151777 - miRNA KNOWN NA 110 110 1 ENSG00000163141.17 BNIPL chr1 151036570 151047600 + protein_coding KNOWN OTTHUMG00000035157.6 11031 2892 42 ENSG00000276164.1 DUX4L20 chr10 133683668 133684936 + unprocessed_pseudogene KNOWN OTTHUMG00000189297.1 1269 1269 1 ENSG00000273678.1 AL845259.2 chr10 133685029 133685112 + miRNA NOVEL NA 84 84 1 ENSG00000237635.2 XX-2136C48.8 chr10 133740606 133741284 + unprocessed_pseudogene KNOWN OTTHUMG00000019339.3 679 679 1 ENSG00000275535.1 AL732375.3 chr10 133741381 133741464 + miRNA NOVEL NA 84 84 1 ENSG00000278664.1 DUX4L10 chr10 133743332 133744598 + unprocessed_pseudogene KNOWN OTTHUMG00000019332.5 1267 1267 1 ENSG00000277023.1 AL732375.5 chr10 133744691 133744774 + miRNA NOVEL NA 84 84 1 ENSG00000278761.1 DUX4L11 chr10 133746641 133747907 + unprocessed_pseudogene KNOWN OTTHUMG00000170701.3 1267 1267 1 ENSG00000273801.1 AL732375.1 chr10 133748001 133748084 + miRNA NOVEL NA 84 84 1 ENSG00000278790.1 DUX4L12 chr10 133749950 133751216 + unprocessed_pseudogene KNOWN OTTHUMG00000185266.3 1267 1267 1 ENSG00000276677.1 AL732375.4 chr10 133751310 133751393 + miRNA NOVEL NA 84 84 1 ENSG00000143443.9 C1orf56 chr1 151047740 151051986 + protein_coding KNOWN OTTHUMG00000035159.2 4247 2331 7 ENSG00000276046.1 DUX4L13 chr10 133753250 133754516 + unprocessed_pseudogene KNOWN OTTHUMG00000019335.4 1267 1267 1 ENSG00000278717.1 AL732375.7 chr10 133754609 133754692 + miRNA NOVEL NA 84 84 1 ENSG00000276904.1 DUX4L14 chr10 133756559 133757825 + unprocessed_pseudogene KNOWN OTTHUMG00000019334.4 1267 1267 1 ENSG00000274074.1 AL732375.2 chr10 133757919 133758002 + miRNA NOVEL NA 84 84 1 ENSG00000278641.1 DUX4L15 chr10 133759859 133761125 + unprocessed_pseudogene KNOWN OTTHUMG00000019336.4 1267 1267 1 ENSG00000277045.1 AL732375.6 chr10 133761218 133761301 + miRNA NOVEL NA 84 84 1 ENSG00000226880.1 XX-2136C48.7 chr10 133768310 133768592 + processed_pseudogene KNOWN OTTHUMG00000019338.1 283 283 1 ENSG00000213147.3 RPL23AP60 chr10 133778246 133778699 + processed_pseudogene KNOWN OTTHUMG00000019340.1 454 454 1 ENSG00000253826.1 WBP1LP10 chr11 75780 76143 + processed_pseudogene KNOWN OTTHUMG00000165075.1 364 364 1 ENSG00000224777.3 OR4F2P chr11 86649 87586 - unprocessed_pseudogene KNOWN OTTHUMG00000154192.2 938 938 1 ENSG00000197622.11 CDC42SE1 chr1 151050971 151070325 - protein_coding KNOWN OTTHUMG00000035158.2 19355 4184 37 ENSG00000254468.2 RP11-304M2.6 chr11 112967 125927 - lincRNA NOVEL OTTHUMG00000165812.1 12961 723 6 ENSG00000270921.1 CICP23 chr11 123312 126123 + processed_pseudogene KNOWN OTTHUMG00000184851.1 2812 2741 2 ENSG00000230724.8 LINC01001 chr11 127204 139612 - lincRNA NOVEL OTTHUMG00000165114.4 12409 3823 19 ENSG00000255229.1 RP11-304M2.3 chr11 129279 186136 + antisense NOVEL OTTHUMG00000165538.1 56858 589 3 ENSG00000222225.1 RNU6-447P chr11 152999 153102 - snRNA KNOWN NA 104 104 1 ENSG00000177951.16 BET1L chr11 167784 207428 - protein_coding KNOWN OTTHUMG00000119071.4 39645 3868 26 ENSG00000188076.2 SCGB1C1 chr11 193080 194573 + protein_coding KNOWN OTTHUMG00000165539.1 1494 431 3 ENSG00000177947.12 ODF3 chr11 196738 200261 + protein_coding KNOWN OTTHUMG00000119073.2 3524 3110 20 ENSG00000254559.1 RP11-304M2.5 chr11 203623 205470 + antisense NOVEL OTTHUMG00000165540.1 1848 574 2 ENSG00000177963.11 RIC8A chr11 207511 215113 + protein_coding KNOWN OTTHUMG00000119069.5 7603 6685 68 ENSG00000213190.3 MLLT11 chr1 151057758 151068497 + protein_coding KNOWN OTTHUMG00000035160.2 10740 4075 2 ENSG00000274298.1 MIR6743 chr11 209336 209406 + miRNA KNOWN NA 71 71 1 ENSG00000142082.13 SIRT3 chr11 215458 236931 - protein_coding KNOWN OTTHUMG00000119074.4 21474 5202 79 ENSG00000185627.16 PSMD13 chr11 236546 252984 + protein_coding KNOWN OTTHUMG00000119072.3 16439 4767 121 ENSG00000277290.1 RP11-326C3.16 chr11 243099 243483 - processed_pseudogene KNOWN OTTHUMG00000187725.1 385 385 1 ENSG00000174885.11 NLRP6 chr11 278365 285359 + protein_coding KNOWN OTTHUMG00000119070.2 6995 3207 18 ENSG00000255026.1 RP11-326C3.2 chr11 287305 288987 + antisense NOVEL OTTHUMG00000165353.1 1683 860 7 ENSG00000142102.14 ATHL1 chr11 289135 296107 + protein_coding KNOWN OTTHUMG00000153218.3 6973 5260 73 ENSG00000206013.2 IFITM5 chr11 298200 299526 - protein_coding KNOWN OTTHUMG00000165355.1 1327 736 2 ENSG00000255533.1 RP11-326C3.4 chr11 303856 304144 - processed_pseudogene KNOWN OTTHUMG00000165356.1 289 289 1 ENSG00000185201.15 IFITM2 chr11 307631 315272 + protein_coding KNOWN OTTHUMG00000165357.3 7642 1543 14 ENSG00000143458.10 GABPB2 chr1 151070578 151125542 + protein_coding KNOWN OTTHUMG00000012193.5 54965 9189 39 ENSG00000254910.1 RP11-326C3.7 chr11 310139 311141 - antisense NOVEL OTTHUMG00000165358.1 1003 392 2 ENSG00000185885.14 IFITM1 chr11 313506 315272 + protein_coding KNOWN OTTHUMG00000165359.2 1767 1080 10 ENSG00000251661.3 RP11-326C3.11 chr11 318640 325631 + antisense NOVEL OTTHUMG00000165541.2 6992 1887 6 ENSG00000142089.14 IFITM3 chr11 319669 327537 - protein_coding KNOWN OTTHUMG00000165542.2 7869 1348 11 ENSG00000255089.1 RP11-326C3.10 chr11 321991 322426 + antisense NOVEL OTTHUMG00000165543.1 436 280 2 ENSG00000270105.1 RP11-326C3.14 chr11 322186 322727 - lincRNA NOVEL OTTHUMG00000184137.1 542 386 2 ENSG00000270030.1 RP11-326C3.13 chr11 325703 326294 - lincRNA NOVEL OTTHUMG00000184138.1 592 592 1 ENSG00000255328.1 RP11-326C3.12 chr11 327171 330122 + lincRNA NOVEL OTTHUMG00000165544.2 2952 1277 7 ENSG00000270972.1 RP11-326C3.15 chr11 333192 333688 + lincRNA NOVEL OTTHUMG00000184167.1 497 497 1 ENSG00000182272.10 B4GALNT4 chr11 369796 382116 + protein_coding KNOWN OTTHUMG00000119075.3 12321 3761 33 ENSG00000233717.1 RP11-68I18.2 chr1 151111912 151112728 - processed_pseudogene KNOWN OTTHUMG00000012215.2 817 171 3 ENSG00000184363.8 PKP3 chr11 392614 404908 + protein_coding KNOWN OTTHUMG00000119068.4 12295 3787 46 ENSG00000185187.11 SIGIRR chr11 405716 417455 - protein_coding KNOWN OTTHUMG00000165412.4 11740 3496 117 ENSG00000185101.11 ANO9 chr11 417933 442011 - protein_coding KNOWN OTTHUMG00000165446.2 24079 6207 93 ENSG00000243562.3 RN7SL838P chr11 440399 440693 - misc_RNA KNOWN NA 295 295 1 ENSG00000174915.10 PTDSS2 chr11 448268 491399 + protein_coding KNOWN OTTHUMG00000119087.5 43132 6113 66 ENSG00000255237.1 RP13-317D12.3 chr11 462930 463899 - antisense NOVEL OTTHUMG00000165470.1 970 664 2 ENSG00000023191.15 RNH1 chr11 494512 507300 - protein_coding KNOWN OTTHUMG00000119086.8 12789 7374 161 ENSG00000254739.1 RP13-46H24.1 chr11 528907 529659 + antisense NOVEL OTTHUMG00000165819.1 753 547 2 ENSG00000174775.15 HRAS chr11 532242 537287 - protein_coding KNOWN OTTHUMG00000131919.8 5046 1854 49 ENSG00000161328.10 LRRC56 chr11 537527 554916 + protein_coding KNOWN OTTHUMG00000132003.1 17390 2769 14 ENSG00000261168.1 RP11-68I18.10 chr1 151130075 151131610 - sense_overlapping NOVEL OTTHUMG00000176093.1 1536 1536 1 ENSG00000185522.7 LMNTD2 chr11 554855 560779 - protein_coding KNOWN OTTHUMG00000132005.3 5925 2934 37 ENSG00000254815.4 RP11-496I9.1 chr11 557595 560107 + antisense NOVEL OTTHUMG00000165116.2 2513 2418 7 ENSG00000099849.13 RASSF7 chr11 560404 564021 + protein_coding KNOWN OTTHUMG00000132004.3 3618 2492 30 ENSG00000247095.2 MIR210HG chr11 565660 568457 - lincRNA KNOWN OTTHUMG00000165284.1 2798 2321 8 ENSG00000199038.1 MIR210 chr11 568089 568198 - miRNA KNOWN NA 110 110 1 ENSG00000070047.10 PHRF1 chr11 576486 612222 + protein_coding KNOWN OTTHUMG00000165141.4 35737 5769 94 ENSG00000185507.18 IRF7 chr11 612553 615999 - protein_coding KNOWN OTTHUMG00000132019.3 3447 2628 108 ENSG00000099834.17 CDHR5 chr11 616565 626078 - protein_coding KNOWN OTTHUMG00000132018.4 9514 3873 95 ENSG00000070031.3 SCT chr11 626431 627143 - protein_coding KNOWN OTTHUMG00000133313.3 713 366 4 ENSG00000069696.6 DRD4 chr11 637293 640706 + protein_coding KNOWN OTTHUMG00000133312.2 3414 1477 7 ENSG00000143434.14 SEMA6C chr1 151131685 151146664 - protein_coding KNOWN OTTHUMG00000012261.3 14980 5809 116 ENSG00000177030.15 DEAF1 chr11 644233 706715 - protein_coding KNOWN OTTHUMG00000165363.7 62483 4452 60 ENSG00000255158.1 RP11-754B17.1 chr11 665910 678391 + antisense NOVEL OTTHUMG00000165430.1 12482 912 3 ENSG00000177106.13 EPS8L2 chr11 694438 727727 + protein_coding KNOWN OTTHUMG00000165165.8 33290 5693 258 ENSG00000177042.13 TMEM80 chr11 695428 705028 + protein_coding KNOWN OTTHUMG00000133307.7 9601 4071 31 ENSG00000269915.1 AP006621.9 chr11 708564 727047 - antisense NOVEL OTTHUMG00000183950.1 18484 532 2 ENSG00000177156.9 TALDO1 chr11 747329 765024 + protein_coding KNOWN OTTHUMG00000133318.4 17696 3005 41 ENSG00000177225.15 PDDC1 chr11 767220 777488 - protein_coding KNOWN OTTHUMG00000133315.7 10269 5510 90 ENSG00000255284.1 AP006621.5 chr11 777578 784297 + lincRNA NOVEL OTTHUMG00000165232.1 6720 1059 8 ENSG00000279672.1 CMB9-55F22.1 chr11 779617 780755 + TEC KNOWN OTTHUMG00000186888.1 1139 1139 4 ENSG00000255142.1 AP006621.6 chr11 781645 782105 + lincRNA NOVEL OTTHUMG00000165233.1 461 284 2 ENSG00000163154.5 TNFAIP8L2 chr1 151156629 151159749 + protein_coding KNOWN OTTHUMG00000012259.2 3121 1178 2 ENSG00000184524.5 CEND1 chr11 787104 790123 - protein_coding KNOWN OTTHUMG00000133308.2 3020 1649 4 ENSG00000177542.9 SLC25A22 chr11 790475 798333 - protein_coding KNOWN OTTHUMG00000133310.10 7859 4647 192 ENSG00000274897.2 PANO1 chr11 797511 799190 + protein_coding NOVEL OTTHUMG00000189301.2 1680 1680 1 ENSG00000177595.16 PIDD1 chr11 799179 809753 - protein_coding KNOWN OTTHUMG00000133306.3 10575 5869 107 ENSG00000177600.7 RPLP2 chr11 809647 812880 + protein_coding KNOWN OTTHUMG00000133317.4 3234 1955 28 ENSG00000199785.1 SNORA52 chr11 811681 811814 + snoRNA KNOWN NA 134 134 1 ENSG00000177666.14 PNPLA2 chr11 818902 825573 + protein_coding KNOWN OTTHUMG00000133309.4 6672 3843 35 ENSG00000255108.1 AP006621.8 chr11 823634 832883 - antisense NOVEL OTTHUMG00000165497.1 9250 792 5 ENSG00000177685.15 CRACR2B chr11 826144 831991 + protein_coding KNOWN OTTHUMG00000165267.5 5848 3913 62 ENSG00000177697.16 CD151 chr11 832843 839831 + protein_coding KNOWN OTTHUMG00000133311.5 6989 3938 114 ENSG00000163156.10 SCNM1 chr1 151156664 151170297 + protein_coding KNOWN OTTHUMG00000012258.9 13634 3265 35 ENSG00000177700.5 POLR2L chr11 837356 842545 - protein_coding KNOWN OTTHUMG00000133316.2 5190 1142 5 ENSG00000214063.9 TSPAN4 chr11 842808 867116 + protein_coding KNOWN OTTHUMG00000133305.5 24309 5841 130 ENSG00000250397.2 RP11-1391J7.1 chr11 856880 859795 - antisense NOVEL OTTHUMG00000165720.1 2916 2061 2 ENSG00000177830.16 CHID1 chr11 867860 915058 - protein_coding KNOWN OTTHUMG00000133314.4 47199 5984 169 ENSG00000183020.12 AP2A2 chr11 924894 1012245 + protein_coding KNOWN OTTHUMG00000165627.6 87352 9638 153 ENSG00000222561.1 RNU6-1025P chr11 948421 948524 + snRNA KNOWN NA 104 104 1 ENSG00000264671.1 AP006477.1 chr11 951295 951364 - miRNA NOVEL NA 70 70 1 ENSG00000184956.14 MUC6 chr11 1012821 1036706 - protein_coding KNOWN OTTHUMG00000165140.3 23886 8428 41 ENSG00000254872.3 RP13-870H17.3 chr11 1049880 1055749 + lincRNA NOVEL OTTHUMG00000165161.2 5870 3443 5 ENSG00000198788.8 MUC2 chr11 1074875 1110511 + processed_transcript KNOWN OTTHUMG00000156800.4 35637 12667 57 ENSG00000228526.2 RP3-510D11.1 chr1 9182007 9202619 - lincRNA NOVEL OTTHUMG00000001762.1 20613 450 3 ENSG00000163155.10 LYSMD1 chr1 151159748 151165948 - protein_coding KNOWN OTTHUMG00000012260.3 6201 2508 6 ENSG00000215182.8 MUC5AC chr11 1157953 1201138 + protein_coding KNOWN OTTHUMG00000154270.5 43186 17448 49 ENSG00000117983.16 MUC5B chr11 1223066 1262172 + protein_coding KNOWN OTTHUMG00000166494.3 39107 18598 86 ENSG00000255177.2 RP11-532E4.2 chr11 1242261 1249676 - antisense NOVEL OTTHUMG00000166615.2 7416 434 2 ENSG00000275669.1 MIR6744 chr11 1256605 1256670 + miRNA KNOWN NA 66 66 1 ENSG00000078902.14 TOLLIP chr11 1274371 1309654 - protein_coding KNOWN OTTHUMG00000133333.4 35284 5983 52 ENSG00000255153.1 TOLLIP-AS1 chr11 1309769 1310707 + antisense NOVEL OTTHUMG00000166230.1 939 939 1 ENSG00000174672.14 BRSK2 chr11 1389899 1462689 + protein_coding KNOWN OTTHUMG00000167089.2 72791 6903 201 ENSG00000182208.11 MOB2 chr11 1469457 1501247 - protein_coding KNOWN OTTHUMG00000165545.2 31791 4518 23 ENSG00000184545.9 DUSP8 chr11 1554044 1571920 - protein_coding KNOWN OTTHUMG00000133348.4 17877 4616 18 ENSG00000233930.3 KRTAP5-AS1 chr11 1571353 1599184 + antisense NOVEL OTTHUMG00000165546.3 27832 2931 8 ENSG00000163157.13 TMOD4 chr1 151169986 151176284 - protein_coding KNOWN OTTHUMG00000012350.5 6299 1843 36 ENSG00000278919.1 AP006285.2 chr11 1580492 1585989 + protein_coding KNOWN NA 5498 2175 3 ENSG00000205869.2 KRTAP5-1 chr11 1584342 1585283 - protein_coding KNOWN OTTHUMG00000057557.1 942 942 1 ENSG00000205867.3 KRTAP5-2 chr11 1597177 1598294 - protein_coding KNOWN OTTHUMG00000165547.2 1118 1118 1 ENSG00000196224.7 KRTAP5-3 chr11 1607565 1608463 - protein_coding KNOWN OTTHUMG00000057559.1 899 899 1 ENSG00000241598.5 KRTAP5-4 chr11 1620958 1622138 - protein_coding KNOWN OTTHUMG00000057553.1 1181 1181 3 ENSG00000185940.10 KRTAP5-5 chr11 1629775 1630707 + protein_coding KNOWN OTTHUMG00000057554.1 933 933 1 ENSG00000231487.1 AP006285.7 chr11 1662584 1663343 - lincRNA NOVEL OTTHUMG00000057558.1 760 588 2 ENSG00000205866.3 FAM99A chr11 1665597 1667856 + lincRNA KNOWN OTTHUMG00000057555.2 2260 2158 4 ENSG00000205865.4 FAM99B chr11 1683269 1685629 - antisense KNOWN OTTHUMG00000057552.1 2361 1067 3 ENSG00000227306.1 AP006285.6 chr11 1688297 1689056 + lincRNA NOVEL OTTHUMG00000057556.1 760 587 2 ENSG00000163159.10 VPS72 chr1 151169987 151195321 - protein_coding KNOWN OTTHUMG00000012345.10 25335 4545 36 ENSG00000205864.1 KRTAP5-6 chr11 1697195 1697755 + protein_coding KNOWN OTTHUMG00000043932.2 561 561 1 ENSG00000244242.1 IFITM10 chr11 1732410 1750591 - protein_coding KNOWN OTTHUMG00000043933.8 18182 4784 11 ENSG00000250644.2 RP11-295K3.1 chr11 1747806 1759051 - protein_coding PUTATIVE OTTHUMG00000161994.2 11246 997 6 ENSG00000117984.11 CTSD chr11 1752752 1763992 - protein_coding KNOWN OTTHUMG00000044760.19 11241 2999 35 ENSG00000235027.1 AC068580.6 chr11 1760348 1762486 + antisense NOVEL OTTHUMG00000045360.2 2139 2015 2 ENSG00000229512.1 AC068580.5 chr11 1763009 1763749 - sense_intronic NOVEL OTTHUMG00000045359.1 741 252 2 ENSG00000265587.1 AC068580.1 chr11 1763931 1764025 + miRNA NOVEL NA 95 95 1 ENSG00000230834.1 AC068580.7 chr11 1776930 1778388 - lincRNA NOVEL OTTHUMG00000045388.1 1459 338 2 ENSG00000230980.1 RPL36AP39 chr11 1792553 1792870 + processed_pseudogene KNOWN OTTHUMG00000045386.2 318 318 1 ENSG00000230080.2 AC139143.2 chr11 1802889 1804095 - processed_pseudogene KNOWN OTTHUMG00000045387.1 1207 1207 1 ENSG00000143398.18 PIP5K1A chr1 151197949 151249536 + protein_coding KNOWN OTTHUMG00000012351.21 51588 5405 119 ENSG00000149043.15 SYT8 chr11 1828307 1837521 + protein_coding KNOWN OTTHUMG00000009026.14 9215 4704 75 ENSG00000130598.14 TNNI2 chr11 1838989 1841680 + protein_coding KNOWN OTTHUMG00000012253.4 2692 1082 37 ENSG00000130592.12 LSP1 chr11 1852970 1892267 + protein_coding KNOWN OTTHUMG00000012252.23 39298 5399 126 ENSG00000264493.1 MIR4298 chr11 1859464 1859536 - miRNA KNOWN NA 73 73 1 ENSG00000249086.1 AC051649.12 chr11 1864177 1866667 + sense_overlapping NOVEL OTTHUMG00000066644.1 2491 330 2 ENSG00000273848.1 MIR7847 chr11 1880045 1880147 + miRNA KNOWN NA 103 103 1 ENSG00000184682.5 PRR33 chr11 1889145 1890854 - protein_coding KNOWN OTTHUMG00000134331.3 1710 1710 1 ENSG00000229671.1 LINC01150 chr11 1902647 1907915 + lincRNA NOVEL OTTHUMG00000150032.1 5269 315 3 ENSG00000130595.15 TNNT3 chr11 1919562 1938706 + protein_coding KNOWN OTTHUMG00000012475.25 19145 2567 176 ENSG00000214026.9 MRPL23 chr11 1947278 1984522 + protein_coding KNOWN OTTHUMG00000012476.7 37245 2975 44 ENSG00000159352.14 PSMD4 chr1 151254703 151267479 + protein_coding KNOWN OTTHUMG00000012349.12 12777 3027 62 ENSG00000226416.1 MRPL23-AS1 chr11 1983237 1989920 - antisense NOVEL OTTHUMG00000012474.2 6684 1876 4 ENSG00000232987.1 LINC01219 chr11 1991096 1993469 + lincRNA NOVEL OTTHUMG00000012473.1 2374 722 3 ENSG00000130600.14 H19 chr11 1995163 2001470 - processed_transcript KNOWN OTTHUMG00000012477.5 6308 2825 61 ENSG00000275266.1 H19_1 chr11 1996540 1996610 + misc_RNA NOVEL NA 71 71 1 ENSG00000278648.1 AC051649.1 chr11 1996730 1996842 - miRNA NOVEL NA 113 113 1 ENSG00000274866.1 H19_2 chr11 1997484 1997552 + misc_RNA NOVEL NA 69 69 1 ENSG00000280586.1 H19_3 chr11 1997713 1997828 + misc_RNA NOVEL NA 116 116 1 ENSG00000167244.16 IGF2 chr11 2129112 2149603 - protein_coding KNOWN OTTHUMG00000009395.11 20492 6979 34 ENSG00000240801.1 AC132217.4 chr11 2129121 2129964 - 3prime_overlapping_ncrna NOVEL OTTHUMG00000009394.2 844 373 2 ENSG00000129965.12 INS-IGF2 chr11 2132538 2161209 - protein_coding KNOWN OTTHUMG00000166213.1 28672 2413 18 ENSG00000232671.4 RP11-126K1.2 chr1 151280024 151281929 - antisense NOVEL OTTHUMG00000012346.6 1906 622 4 ENSG00000207805.2 MIR483 chr11 2134111 2134222 - miRNA KNOWN NA 112 112 1 ENSG00000099869.7 IGF2-AS chr11 2140501 2148666 + antisense KNOWN OTTHUMG00000009557.5 8166 2869 8 ENSG00000254647.5 INS chr11 2159779 2161341 - protein_coding KNOWN OTTHUMG00000009558.8 1563 776 12 ENSG00000180176.13 TH chr11 2163929 2171877 - protein_coding KNOWN OTTHUMG00000009559.5 7949 3243 98 ENSG00000265258.1 MIR4686 chr11 2173063 2173138 + miRNA KNOWN NA 76 76 1 ENSG00000183734.4 ASCL2 chr11 2268495 2270952 - protein_coding KNOWN OTTHUMG00000009648.1 2458 1852 2 ENSG00000110665.10 C11orf21 chr11 2295645 2303049 - protein_coding KNOWN OTTHUMG00000009759.6 7405 4199 14 ENSG00000064201.14 TSPAN32 chr11 2301997 2318200 + protein_coding KNOWN OTTHUMG00000009762.19 16204 3793 128 ENSG00000207308.1 RNU6-878P chr11 2321718 2321827 + snRNA KNOWN NA 110 110 1 ENSG00000238184.1 CD81-AS1 chr11 2328749 2377992 - antisense NOVEL OTTHUMG00000009760.2 49244 1542 6 ENSG00000143373.16 ZNF687 chr1 151281618 151292180 + protein_coding KNOWN OTTHUMG00000012347.11 10563 6349 41 ENSG00000236264.4 RPL26P30 chr11 2335132 2335776 - transcribed_processed_pseudogene KNOWN OTTHUMG00000009761.2 645 645 2 ENSG00000199550.1 Y_RNA chr11 2372638 2372750 + misc_RNA NOVEL NA 113 113 1 ENSG00000110651.10 CD81 chr11 2376177 2397419 + protein_coding KNOWN OTTHUMG00000009892.6 21243 7394 102 ENSG00000184281.13 TSSC4 chr11 2400488 2403878 + protein_coding KNOWN OTTHUMG00000009895.5 3391 2659 34 ENSG00000070985.12 TRPM5 chr11 2404515 2423045 - protein_coding KNOWN OTTHUMG00000009896.2 18531 3962 96 ENSG00000230483.1 AC124057.5 chr11 2404515 2407908 + antisense NOVEL OTTHUMG00000009894.1 3394 404 2 ENSG00000053918.14 KCNQ1 chr11 2444684 2849109 + protein_coding KNOWN OTTHUMG00000009900.5 404426 3971 48 ENSG00000269821.1 KCNQ1OT1 chr11 2608328 2699994 - antisense KNOWN OTTHUMG00000171022.2 91667 91667 1 ENSG00000275666.1 KCNQ1OT1_1 chr11 2652099 2652562 + misc_RNA NOVEL NA 464 464 1 ENSG00000276105.1 KCNQ1OT1_2 chr11 2674097 2674292 + misc_RNA NOVEL NA 196 196 1 ENSG00000143393.15 PI4KB chr1 151291797 151327715 - protein_coding KNOWN OTTHUMG00000012348.13 35919 5456 87 ENSG00000276494.1 KCNQ1OT1_3 chr11 2674625 2674740 + misc_RNA NOVEL NA 116 116 1 ENSG00000276015.1 KCNQ1OT1_5 chr11 2697851 2698076 + misc_RNA NOVEL NA 226 226 1 ENSG00000236041.1 COX6CP18 chr11 2771356 2771577 + processed_pseudogene KNOWN OTTHUMG00000009941.1 222 222 1 ENSG00000229414.2 KCNQ1-AS1 chr11 2840135 2861568 - antisense NOVEL OTTHUMG00000011704.2 21434 1084 3 ENSG00000237941.2 KCNQ1DN chr11 2870033 2872105 + antisense KNOWN OTTHUMG00000009942.3 2073 1093 2 ENSG00000274740.1 KCNQ1DN chr11 2871437 2871498 + misc_RNA NOVEL NA 62 62 1 ENSG00000129757.11 CDKN1C chr11 2883213 2885881 - protein_coding KNOWN OTTHUMG00000010040.3 2669 2586 16 ENSG00000254827.4 SLC22A18AS chr11 2887780 2903740 - antisense KNOWN OTTHUMG00000010038.5 15961 1782 9 ENSG00000110628.12 SLC22A18 chr11 2899721 2925246 + protein_coding KNOWN OTTHUMG00000010037.10 25526 5316 81 ENSG00000181649.5 PHLDA2 chr11 2928273 2929455 - protein_coding KNOWN OTTHUMG00000010926.1 1183 955 2 ENSG00000265753.2 RN7SL444P chr1 151300665 151300964 - misc_RNA KNOWN NA 300 300 1 ENSG00000205531.11 NAP1L4 chr11 2944431 2992377 - protein_coding KNOWN OTTHUMG00000011009.10 47947 5200 171 ENSG00000207008.1 SNORA54 chr11 2963771 2963893 - snoRNA KNOWN NA 123 123 1 ENSG00000183562.3 CTC-343N3.1 chr11 2989863 2991344 + antisense NOVEL OTTHUMG00000187445.1 1482 1482 1 ENSG00000110619.15 CARS chr11 3000922 3057613 - protein_coding KNOWN OTTHUMG00000010927.9 56692 10037 176 ENSG00000247473.2 CARS-AS1 chr11 3029009 3041260 + antisense NOVEL OTTHUMG00000165360.1 12252 2683 4 ENSG00000201616.1 RNU1-91P chr11 3048359 3048521 - snRNA KNOWN NA 163 163 1 ENSG00000236710.1 AC108448.2 chr11 3084393 3085443 - processed_pseudogene KNOWN OTTHUMG00000011700.1 1051 730 2 ENSG00000021762.18 OSBPL5 chr11 3087116 3166739 - protein_coding KNOWN OTTHUMG00000011702.6 79624 7466 179 ENSG00000234791.1 AC108448.3 chr11 3189546 3189929 + antisense NOVEL OTTHUMG00000011701.1 384 293 2 ENSG00000280914.1 Metazoa_SRP chr11 3210285 3210551 + misc_RNA NOVEL NA 267 267 1 ENSG00000273481.1 RP11-126K1.9 chr1 151327949 151328429 + lincRNA NOVEL OTTHUMG00000186416.2 481 481 1 ENSG00000182170.3 MRGPRG chr11 3217944 3218813 - protein_coding KNOWN OTTHUMG00000011709.1 870 870 1 ENSG00000236301.5 MRGPRG-AS1 chr11 3218332 3223131 + antisense KNOWN OTTHUMG00000011707.2 4800 2012 8 ENSG00000224513.2 AC109309.4 chr11 3226061 3232838 + antisense NOVEL OTTHUMG00000011710.2 6778 435 3 ENSG00000184350.9 MRGPRE chr11 3227698 3232386 - protein_coding KNOWN OTTHUMG00000011708.5 4689 1409 2 ENSG00000236987.2 NDUFA5P8 chr11 3276045 3276390 + processed_pseudogene KNOWN OTTHUMG00000011711.2 346 346 1 ENSG00000276951.1 RP11-11A9.1 chr11 3289311 3289642 - processed_pseudogene KNOWN OTTHUMG00000187727.1 332 332 1 ENSG00000232390.3 NDUFA5P1 chr11 3321862 3322202 + processed_pseudogene KNOWN OTTHUMG00000011713.3 341 341 1 ENSG00000273813.1 RP11-11A9.2 chr11 3335125 3335407 - processed_pseudogene KNOWN OTTHUMG00000187728.1 283 283 1 ENSG00000254592.1 RP5-1173A5.1 chr11 3336721 3340630 + antisense NOVEL OTTHUMG00000166848.1 3910 783 2 ENSG00000005801.15 ZNF195 chr11 3339261 3379222 - protein_coding KNOWN OTTHUMG00000011694.7 39962 5709 151 ENSG00000234546.2 RP3-510D11.2 chr1 9182204 9192089 + lincRNA NOVEL OTTHUMG00000001764.2 9886 985 3 ENSG00000143390.16 RFX5 chr1 151340640 151347357 - protein_coding KNOWN OTTHUMG00000012495.23 6718 4586 150 ENSG00000263365.1 AC123788.1 chr11 3373529 3373621 - miRNA NOVEL NA 93 93 1 ENSG00000223756.5 TSSC2 chr11 3380961 3408978 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000011705.3 28018 3666 39 ENSG00000189398.5 OR7E12P chr11 3390780 3391752 - unprocessed_pseudogene KNOWN OTTHUMG00000011703.1 973 973 1 ENSG00000166492.9 FAM86GP chr11 3410352 3422496 - unprocessed_pseudogene KNOWN OTTHUMG00000036109.2 12145 971 8 ENSG00000254757.1 RP13-726E6.1 chr11 3469319 3531328 + lincRNA NOVEL OTTHUMG00000166985.1 62010 450 3 ENSG00000255367.1 RP13-726E6.2 chr11 3481520 3581211 - lincRNA NOVEL OTTHUMG00000166987.1 99692 1377 8 ENSG00000255522.1 SNRPCP5 chr11 3531420 3531608 + processed_pseudogene KNOWN OTTHUMG00000166988.1 189 189 1 ENSG00000237226.1 RPS3AP39 chr11 3549745 3550519 - processed_pseudogene KNOWN OTTHUMG00000011698.1 775 775 1 ENSG00000221019.1 AC127526.1 chr11 3557342 3557489 + miRNA NOVEL NA 148 148 1 ENSG00000223688.2 RPS24P14 chr11 3559657 3560022 + processed_pseudogene KNOWN OTTHUMG00000011699.2 366 366 1 ENSG00000224645.1 RP11-126K1.8 chr1 151340648 151341966 + antisense NOVEL OTTHUMG00000073673.1 1319 358 2 ENSG00000230851.1 AP006294.2 chr11 3591277 3591615 - processed_pseudogene KNOWN OTTHUMG00000011843.1 339 339 1 ENSG00000238161.1 OR7E117P chr11 3599595 3600706 - unprocessed_pseudogene KNOWN OTTHUMG00000011847.1 1112 1112 1 ENSG00000182048.10 TRPC2 chr11 3609901 3637559 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000011712.2 27659 3262 24 ENSG00000167311.12 ART5 chr11 3638503 3642316 - protein_coding KNOWN OTTHUMG00000011842.4 3814 1691 19 ENSG00000129744.2 ART1 chr11 3645128 3664416 + protein_coding KNOWN OTTHUMG00000011845.2 19289 1467 9 ENSG00000201279.1 Y_RNA chr11 3663815 3663911 - misc_RNA NOVEL NA 97 97 1 ENSG00000200201.1 Y_RNA chr11 3665164 3665259 - misc_RNA NOVEL NA 96 96 1 ENSG00000129749.3 CHRNA10 chr11 3665587 3671384 - protein_coding KNOWN OTTHUMG00000011844.2 5798 2703 17 ENSG00000110713.14 NUP98 chr11 3671083 3797792 - protein_coding KNOWN OTTHUMG00000011846.5 126710 9905 201 ENSG00000251934.1 RNU6-1143P chr11 3714772 3714875 - snRNA KNOWN NA 104 104 1 ENSG00000237976.1 RP11-126K1.6 chr1 151346967 151348027 + antisense NOVEL OTTHUMG00000012496.1 1061 618 2 ENSG00000238304.1 RNU7-50P chr11 3781395 3781456 + snRNA KNOWN NA 62 62 1 ENSG00000148985.18 PGAP2 chr11 3797724 3826371 + protein_coding KNOWN OTTHUMG00000012238.12 28648 3781 201 ENSG00000250404.1 AC090587.2 chr11 3816752 3821900 + sense_overlapping NOVEL OTTHUMG00000012239.1 5149 2843 2 ENSG00000177105.9 RHOG chr11 3826978 3840983 - protein_coding KNOWN OTTHUMG00000012287.3 14006 1782 8 ENSG00000228661.1 AC090587.5 chr11 3854318 3855509 - antisense NOVEL OTTHUMG00000012285.1 1192 494 2 ENSG00000167323.8 STIM1 chr11 3854527 4093210 + protein_coding KNOWN OTTHUMG00000133360.3 238684 7130 116 ENSG00000229368.1 AC090587.4 chr11 3854612 3855399 + sense_overlapping NOVEL OTTHUMG00000012284.1 788 527 2 ENSG00000263421.1 MIR4687 chr11 3856062 3856141 + miRNA KNOWN NA 80 80 1 ENSG00000230593.3 AC090804.1 chr11 3892398 3892887 - processed_pseudogene KNOWN OTTHUMG00000012286.1 490 490 1 ENSG00000206976.1 SNORA7 chr11 3922567 3922703 + snoRNA NOVEL NA 137 137 1 ENSG00000143416.19 SELENBP1 chr1 151364302 151372733 - protein_coding KNOWN OTTHUMG00000012498.24 8432 3504 169 ENSG00000255232.1 RP11-438N5.4 chr11 3961277 3961538 + processed_pseudogene KNOWN OTTHUMG00000165493.1 262 262 1 ENSG00000255141.1 HNRNPA1P76 chr11 3972881 3974237 - processed_pseudogene KNOWN OTTHUMG00000165494.2 1357 848 2 ENSG00000224555.3 RP11-438N5.2 chr11 3989163 3989463 - processed_pseudogene KNOWN OTTHUMG00000165495.1 301 301 1 ENSG00000240385.1 RPS29P20 chr11 4018948 4019118 + processed_pseudogene KNOWN OTTHUMG00000158282.1 171 171 1 ENSG00000167325.13 RRM1 chr11 4094707 4138876 + protein_coding KNOWN OTTHUMG00000133361.4 44170 4177 121 ENSG00000255276.1 RRM1-AS1 chr11 4137116 4138257 - antisense NOVEL OTTHUMG00000165304.1 1142 346 2 ENSG00000231548.1 OR55B1P chr11 4146282 4147295 - unitary_pseudogene KNOWN OTTHUMG00000154224.1 1014 1014 1 ENSG00000254480.1 RP11-23F23.2 chr11 4187140 4202655 + lincRNA NOVEL OTTHUMG00000165305.1 15516 462 2 ENSG00000255387.1 RP11-23F23.3 chr11 4210354 4212091 - processed_pseudogene KNOWN OTTHUMG00000165306.1 1738 1738 1 ENSG00000237565.3 SSU72P5 chr11 4233286 4233869 + processed_pseudogene KNOWN OTTHUMG00000165695.1 584 584 1 ENSG00000159377.9 PSMB4 chr1 151399534 151401944 + protein_coding KNOWN OTTHUMG00000012494.4 2411 2158 28 ENSG00000255194.3 SSU72P2 chr11 4242062 4242641 - processed_pseudogene KNOWN OTTHUMG00000165696.1 580 580 1 ENSG00000236175.3 SSU72P6 chr11 4278705 4279192 + processed_pseudogene KNOWN OTTHUMG00000165697.1 488 488 1 ENSG00000186223.4 SSU72P4 chr11 4287502 4288083 - processed_pseudogene KNOWN OTTHUMG00000165698.1 582 582 1 ENSG00000186232.3 SSU72P3 chr11 4329865 4330446 + processed_pseudogene KNOWN OTTHUMG00000165699.1 582 582 1 ENSG00000229542.3 SSU72P7 chr11 4338663 4339245 - processed_pseudogene KNOWN OTTHUMG00000165700.1 583 583 1 ENSG00000221996.4 OR52B4 chr11 4367263 4368386 - polymorphic_pseudogene KNOWN OTTHUMG00000154222.3 1124 1124 2 ENSG00000280253.1 OR52B4 chr11 4367351 4368295 - protein_coding KNOWN NA 945 945 1 ENSG00000175800.5 OR52B3P chr11 4378282 4379209 + unitary_pseudogene KNOWN OTTHUMG00000154223.1 928 928 1 ENSG00000132109.9 TRIM21 chr11 4384897 4393696 - protein_coding KNOWN OTTHUMG00000165701.1 8800 1929 10 ENSG00000237272.1 OR51R1P chr11 4418060 4418963 + unitary_pseudogene KNOWN OTTHUMG00000154338.1 904 904 1 ENSG00000143442.20 POGZ chr1 151402724 151459465 - protein_coding KNOWN OTTHUMG00000012499.8 56742 10272 174 ENSG00000171999.7 OR52P2P chr11 4431323 4432277 - unitary_pseudogene KNOWN OTTHUMG00000165702.1 955 955 1 ENSG00000221030.1 AC010930.1 chr11 4446642 4446727 + miRNA NOVEL NA 86 86 1 ENSG00000181963.5 OR52K2 chr11 4449295 4450361 + protein_coding KNOWN OTTHUMG00000165703.1 1067 1067 1 ENSG00000225101.4 OR52K3P chr11 4474813 4475755 + unprocessed_pseudogene KNOWN OTTHUMG00000165704.1 943 943 1 ENSG00000196778.2 OR52K1 chr11 4488879 4489908 + protein_coding KNOWN OTTHUMG00000165705.1 1030 1030 1 ENSG00000226616.1 OR52M2P chr11 4514966 4515924 - unprocessed_pseudogene KNOWN OTTHUMG00000154339.1 959 959 1 ENSG00000197790.1 OR52M1 chr11 4545191 4546144 + protein_coding KNOWN OTTHUMG00000165706.1 954 954 1 ENSG00000171987.1 C11orf40 chr11 4571423 4577820 - protein_coding KNOWN OTTHUMG00000165345.2 6398 654 4 ENSG00000226288.1 OR52I2 chr11 4586791 4587905 + protein_coding KNOWN OTTHUMG00000165721.1 1115 1115 1 ENSG00000232268.5 OR52I1 chr11 4593750 4595013 + protein_coding KNOWN OTTHUMG00000165722.2 1264 1050 4 ENSG00000238711.1 RNY4P25 chr1 151439000 151439095 + misc_RNA KNOWN NA 96 96 1 ENSG00000167333.11 TRIM68 chr11 4598672 4608259 - protein_coding KNOWN OTTHUMG00000165723.1 9588 4282 33 ENSG00000197428.2 OR51D1 chr11 4639715 4640838 + protein_coding KNOWN OTTHUMG00000165724.1 1124 1124 1 ENSG00000180785.8 OR51E1 chr11 4643420 4655488 + protein_coding KNOWN OTTHUMG00000157024.2 12069 3614 4 ENSG00000180723.6 OR51A9P chr11 4660853 4661763 - unitary_pseudogene KNOWN OTTHUMG00000154340.2 911 911 1 ENSG00000167332.7 OR51E2 chr11 4680171 4697854 - protein_coding KNOWN OTTHUMG00000133362.3 17684 2872 5 ENSG00000197674.5 OR51C1P chr11 4690761 4691702 - unprocessed_pseudogene KNOWN OTTHUMG00000186285.1 942 942 1 ENSG00000167346.6 MMP26 chr11 4704927 4992429 + protein_coding KNOWN OTTHUMG00000066442.4 287503 1308 17 ENSG00000272634.1 OR51F5P chr11 4709569 4710510 + unprocessed_pseudogene KNOWN OTTHUMG00000186286.1 942 942 1 ENSG00000272664.1 OR51C4P chr11 4718612 4719559 + unprocessed_pseudogene KNOWN OTTHUMG00000186287.1 948 948 1 ENSG00000271602.1 KRT8P49 chr11 4722740 4724171 - processed_pseudogene KNOWN OTTHUMG00000184842.1 1432 1432 1 ENSG00000143375.13 CGN chr1 151510510 151538692 + protein_coding KNOWN OTTHUMG00000012497.14 28183 6616 45 ENSG00000272559.1 OR51F3P chr11 4736178 4737078 - unprocessed_pseudogene KNOWN OTTHUMG00000186288.2 901 901 1 ENSG00000273051.1 OR51F4P chr11 4752046 4752944 - unprocessed_pseudogene KNOWN OTTHUMG00000186289.1 899 899 1 ENSG00000201980.1 SNORA62 chr11 4756645 4756797 + snoRNA NOVEL NA 153 153 1 ENSG00000280021.1 OR51F1 chr11 4768979 4769938 - polymorphic_pseudogene KNOWN OTTHUMG00000066503.2 960 960 2 ENSG00000188069.4 OR51F1 chr11 4768979 4769917 - protein_coding KNOWN NA 939 939 1 ENSG00000176951.6 OR51N1P chr11 4786754 4787705 + unprocessed_pseudogene KNOWN OTTHUMG00000066509.1 952 952 1 ENSG00000231070.1 OR52Y1P chr11 4793778 4795284 - unprocessed_pseudogene KNOWN OTTHUMG00000066504.1 1507 828 2 ENSG00000176937.9 OR52R1 chr11 4803433 4804380 - protein_coding KNOWN NA 948 948 1 ENSG00000279270.1 OR52R1 chr11 4803433 4804380 - polymorphic_pseudogene KNOWN OTTHUMG00000066510.1 948 948 2 ENSG00000176925.6 OR51F2 chr11 4821386 4822414 + protein_coding KNOWN OTTHUMG00000066508.1 1029 1029 1 ENSG00000252840.1 SNORA44 chr1 151527831 151527938 - snoRNA NOVEL NA 108 108 1 ENSG00000197984.3 OR51A8P chr11 4832133 4833072 + unprocessed_pseudogene KNOWN OTTHUMG00000066511.1 940 940 1 ENSG00000176922.3 OR51S1 chr11 4848237 4849208 - protein_coding KNOWN OTTHUMG00000066506.1 972 972 1 ENSG00000176904.1 OR51H1 chr11 4859656 4860564 - protein_coding KNOWN OTTHUMG00000066512.1 909 909 1 ENSG00000198217.3 OR51H2P chr11 4876557 4877462 + unprocessed_pseudogene KNOWN OTTHUMG00000066500.1 906 906 1 ENSG00000176900.2 OR51T1 chr11 4881819 4882883 + protein_coding KNOWN OTTHUMG00000066507.1 1065 1065 2 ENSG00000197023.6 OR51A6P chr11 4889593 4890596 - unprocessed_pseudogene KNOWN OTTHUMG00000066505.1 1004 1004 1 ENSG00000176895.8 OR51A7 chr11 4907370 4908308 + protein_coding KNOWN OTTHUMG00000066502.1 939 939 1 ENSG00000176893.4 OR51G2 chr11 4914719 4915663 - protein_coding KNOWN OTTHUMG00000066501.1 945 945 1 ENSG00000278870.1 OR51G1 chr11 4923301 4924407 - polymorphic_pseudogene KNOWN OTTHUMG00000066532.1 1107 1107 2 ENSG00000176879.3 OR51G1 chr11 4923374 4924339 - protein_coding KNOWN NA 966 966 1 ENSG00000143367.14 TUFT1 chr1 151540305 151583583 + protein_coding KNOWN OTTHUMG00000012536.3 43279 3878 58 ENSG00000227023.1 OR51A3P chr11 4937371 4938294 - unprocessed_pseudogene KNOWN OTTHUMG00000066613.1 924 924 1 ENSG00000205497.3 OR51A4 chr11 4946159 4947100 - protein_coding KNOWN OTTHUMG00000066614.1 942 942 1 ENSG00000205496.1 OR51A2 chr11 4954772 4955713 - protein_coding KNOWN OTTHUMG00000066602.1 942 942 1 ENSG00000225003.1 OR51A5P chr11 4972943 4973884 - unprocessed_pseudogene KNOWN OTTHUMG00000066599.1 942 942 1 ENSG00000176798.1 OR51L1 chr11 4998983 4999930 + protein_coding KNOWN OTTHUMG00000066605.1 948 948 1 ENSG00000224300.1 OR51P1P chr11 5015138 5016079 + unprocessed_pseudogene KNOWN OTTHUMG00000066615.1 942 942 1 ENSG00000230261.1 OR52J2P chr11 5037013 5037951 + unprocessed_pseudogene KNOWN OTTHUMG00000066606.1 939 939 1 ENSG00000205495.1 OR52J3 chr11 5046526 5047461 + protein_coding KNOWN OTTHUMG00000066600.2 936 936 1 ENSG00000176787.2 OR52E2 chr11 5058650 5059627 - protein_coding KNOWN OTTHUMG00000066608.1 978 978 1 ENSG00000236621.3 OR52E1 chr11 5069572 5070461 + pseudogene KNOWN NA 890 888 2 ENSG00000049239.11 H6PD chr1 9234775 9271337 + protein_coding KNOWN OTTHUMG00000001768.2 36563 9321 12 ENSG00000232536.1 RP11-74C1.4 chr1 151540516 151561855 + sense_intronic NOVEL OTTHUMG00000133697.1 21340 526 2 ENSG00000273085.1 OR52E1 chr11 5069572 5070497 + polymorphic_pseudogene KNOWN OTTHUMG00000066611.2 926 926 1 ENSG00000237354.1 OR52S1P chr11 5076130 5077066 - unprocessed_pseudogene KNOWN OTTHUMG00000066607.1 937 937 1 ENSG00000226157.1 OR52E3P chr11 5092676 5093611 + unprocessed_pseudogene KNOWN OTTHUMG00000066609.1 936 936 1 ENSG00000203560.3 OR52J1P chr11 5104153 5105084 + unprocessed_pseudogene KNOWN OTTHUMG00000066601.1 932 932 1 ENSG00000236897.1 AC113331.9 chr11 5106062 5107530 - lincRNA NOVEL OTTHUMG00000066612.1 1469 869 2 ENSG00000205494.8 OR52A4 chr11 5120621 5124513 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000066610.4 3893 1548 7 ENSG00000171944.1 OR52A5 chr11 5131692 5132642 - protein_coding KNOWN OTTHUMG00000066616.1 951 951 1 ENSG00000182070.4 OR52A1 chr11 5151009 5186382 - protein_coding KNOWN OTTHUMG00000066603.2 35374 1779 3 ENSG00000176752.6 OR51A1P chr11 5170351 5171296 - unitary_pseudogene KNOWN OTTHUMG00000066604.1 946 946 1 ENSG00000176748.5 OR52Z1 chr11 5177714 5178610 - polymorphic_pseudogene KNOWN OTTHUMG00000066624.3 897 897 1 ENSG00000207606.1 MIR554 chr1 151545796 151545891 + miRNA KNOWN NA 96 96 1 ENSG00000176742.1 OR51V1 chr11 5199735 5200700 - protein_coding KNOWN OTTHUMG00000066671.1 966 966 1 ENSG00000224091.1 AC104389.16 chr11 5205041 5207308 + antisense NOVEL OTTHUMG00000066679.1 2268 522 2 ENSG00000221031.1 CoTC_ribozyme chr11 5224448 5224639 - ribozyme NOVEL NA 192 192 1 ENSG00000244734.2 HBB chr11 5225464 5229395 - protein_coding KNOWN OTTHUMG00000066678.3 3932 1179 11 ENSG00000223609.6 HBD chr11 5232678 5235370 - protein_coding KNOWN OTTHUMG00000066674.2 2693 1062 11 ENSG00000229988.1 HBBP1 chr11 5241954 5243537 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000066684.2 1584 605 5 ENSG00000260629.1 BGLT3 chr11 5244554 5245547 - sense_overlapping NOVEL OTTHUMG00000173138.1 994 994 1 ENSG00000213934.5 HBG1 chr11 5248083 5249892 - protein_coding KNOWN OTTHUMG00000066681.1 1810 808 3 ENSG00000196565.11 HBG2 chr11 5248274 5645789 - protein_coding KNOWN OTTHUMG00000066673.6 397516 2241 20 ENSG00000279824.1 AC104389.2 chr11 5248449 5249858 + protein_coding KNOWN NA 1410 411 3 ENSG00000223861.1 RP11-74C1.2 chr1 151557446 151557940 + processed_pseudogene KNOWN OTTHUMG00000012537.2 495 495 1 ENSG00000279346.1 AC104389.1 chr11 5253367 5254782 + protein_coding KNOWN NA 1416 411 3 ENSG00000213931.4 HBE1 chr11 5268345 5505617 - protein_coding KNOWN OTTHUMG00000066675.4 237273 928 11 ENSG00000229093.1 OR51AB1P chr11 5291761 5292380 - unprocessed_pseudogene KNOWN OTTHUMG00000066677.1 620 620 1 ENSG00000183251.3 OR51B4 chr11 5301014 5301996 - protein_coding KNOWN OTTHUMG00000066665.2 983 983 1 ENSG00000167355.6 AC104389.28 chr11 5304976 5505652 - processed_transcript NOVEL OTTHUMG00000066670.2 200677 2771 20 ENSG00000223735.1 OR51B3P chr11 5314772 5315684 - unprocessed_pseudogene KNOWN OTTHUMG00000066683.1 913 913 1 ENSG00000279012.1 OR51B2 chr11 5323311 5324352 - polymorphic_pseudogene KNOWN OTTHUMG00000066682.1 1042 1042 2 ENSG00000184881.3 OR51B2 chr11 5323359 5324297 - protein_coding KNOWN NA 939 939 1 ENSG00000236359.1 OR51B8P chr11 5330592 5331360 - unprocessed_pseudogene KNOWN OTTHUMG00000066668.1 769 769 1 ENSG00000242180.3 OR51B5 chr11 5342586 5343524 - protein_coding KNOWN OTTHUMG00000066676.1 939 939 1 ENSG00000250734.2 RP11-404E16.1 chr1 151612038 151613363 - antisense NOVEL OTTHUMG00000150102.2 1326 535 2 ENSG00000176239.7 OR51B6 chr11 5351508 5352446 + protein_coding KNOWN OTTHUMG00000066669.1 939 939 1 ENSG00000230087.1 AC104389.31 chr11 5354692 5355578 + processed_pseudogene KNOWN OTTHUMG00000066667.1 887 887 1 ENSG00000236248.1 AC104389.32 chr11 5362615 5362849 + processed_pseudogene KNOWN OTTHUMG00000066672.1 235 235 1 ENSG00000184698.4 OR51M1 chr11 5389399 5390379 + protein_coding KNOWN OTTHUMG00000066680.1 981 981 1 ENSG00000184321.1 OR51J1 chr11 5402597 5403547 + protein_coding KNOWN OTTHUMG00000066666.1 951 951 1 ENSG00000167360.4 OR51Q1 chr11 5422111 5423206 + protein_coding KNOWN OTTHUMG00000066896.2 1096 1096 1 ENSG00000248424.1 OR51K1P chr11 5430653 5431602 - unitary_pseudogene KNOWN OTTHUMG00000066890.1 950 950 1 ENSG00000167359.8 OR51I1 chr11 5440570 5441514 - protein_coding KNOWN OTTHUMG00000066908.1 945 945 1 ENSG00000187918.4 OR51I2 chr11 5453489 5454427 + protein_coding KNOWN OTTHUMG00000066902.1 939 939 1 ENSG00000230484.2 OR51A10P chr11 5468486 5469422 - unitary_pseudogene KNOWN OTTHUMG00000066900.1 937 937 1 ENSG00000143376.11 SNX27 chr1 151612065 151699091 + protein_coding KNOWN OTTHUMG00000013052.8 87027 7467 51 ENSG00000181609.5 OR52D1 chr11 5488685 5489749 + protein_coding KNOWN OTTHUMG00000066895.2 1065 1065 1 ENSG00000175520.8 UBQLN3 chr11 5507300 5509985 - protein_coding KNOWN OTTHUMG00000066886.1 2686 2440 4 ENSG00000175518.6 UBQLNL chr11 5514393 5516705 - protein_coding KNOWN OTTHUMG00000066903.2 2313 2313 1 ENSG00000224295.2 AC087380.14 chr11 5518441 5524955 - unprocessed_pseudogene KNOWN OTTHUMG00000066889.2 6515 1478 7 ENSG00000249633.1 OR52V1P chr11 5527277 5528174 - unprocessed_pseudogene KNOWN OTTHUMG00000066905.1 898 898 1 ENSG00000181616.8 OR52H1 chr11 5544561 5545523 - protein_coding KNOWN OTTHUMG00000066909.1 963 963 1 ENSG00000248553.1 OR52H2P chr11 5551662 5552563 - unitary_pseudogene KNOWN OTTHUMG00000066894.1 902 902 1 ENSG00000231049.1 OR52B5P chr11 5560967 5561917 + unprocessed_pseudogene KNOWN OTTHUMG00000066901.1 951 951 1 ENSG00000233646.1 OR52T1P chr11 5566678 5567616 - unprocessed_pseudogene KNOWN OTTHUMG00000066910.1 939 939 1 ENSG00000229534.1 HNRNPA1P53 chr11 5571247 5572192 - processed_pseudogene KNOWN OTTHUMG00000066898.1 946 946 1 ENSG00000206635.1 RNU6-1062P chr1 151629324 151629430 + snRNA KNOWN NA 107 107 1 ENSG00000239920.1 AC015691.13 chr11 5572322 5624896 - antisense NOVEL OTTHUMG00000133694.1 52575 535 4 ENSG00000187747.2 OR52B6 chr11 5580877 5581884 + protein_coding KNOWN OTTHUMG00000066906.1 1008 1008 1 ENSG00000121236.18 TRIM6 chr11 5596109 5612958 + protein_coding KNOWN OTTHUMG00000150029.6 16850 3947 91 ENSG00000258588.3 TRIM6-TRIM34 chr11 5596725 5644398 + protein_coding KNOWN OTTHUMG00000066899.4 47674 3391 14 ENSG00000258659.5 TRIM34 chr11 5619764 5644398 + protein_coding KNOWN OTTHUMG00000066892.3 24635 2690 25 ENSG00000132256.17 TRIM5 chr11 5663557 5938619 - protein_coding KNOWN OTTHUMG00000066893.7 275063 4804 65 ENSG00000132274.14 TRIM22 chr11 5689689 5737089 + protein_coding KNOWN OTTHUMG00000066904.4 47401 6020 56 ENSG00000232381.1 OR52U1P chr11 5719290 5720212 + unitary_pseudogene KNOWN OTTHUMG00000066907.1 923 923 1 ENSG00000181109.3 OR52P1P chr11 5726502 5727464 + unitary_pseudogene KNOWN OTTHUMG00000066888.1 963 963 1 ENSG00000181023.6 OR56B1 chr11 5736517 5737491 + protein_coding KNOWN OTTHUMG00000066891.2 975 975 1 ENSG00000227045.1 RP11-98D18.1 chr1 151701026 151708386 + antisense NOVEL OTTHUMG00000045372.1 7361 386 2 ENSG00000181074.3 OR52N4 chr11 5754693 5755729 + protein_coding KNOWN OTTHUMG00000066887.2 1037 1037 1 ENSG00000181017.4 OR56B2P chr11 5765096 5766049 + unprocessed_pseudogene KNOWN OTTHUMG00000168798.1 954 954 1 ENSG00000181009.4 OR52N5 chr11 5777634 5778667 - protein_coding KNOWN OTTHUMG00000168799.1 1034 1034 1 ENSG00000181001.1 OR52N1 chr11 5787854 5788816 - protein_coding KNOWN OTTHUMG00000168800.1 963 963 1 ENSG00000236965.4 OR52N3P chr11 5800364 5801297 + unitary_pseudogene KNOWN OTTHUMG00000154349.1 934 934 1 ENSG00000180988.2 OR52N2 chr11 5820314 5821348 + protein_coding KNOWN OTTHUMG00000168801.1 1035 1035 1 ENSG00000205409.3 OR52E6 chr11 5840928 5841952 - protein_coding KNOWN OTTHUMG00000168802.1 1025 982 3 ENSG00000183269.5 OR52E8 chr11 5856674 5857734 - protein_coding KNOWN OTTHUMG00000168803.1 1061 1061 1 ENSG00000233563.1 OR52E7P chr11 5873960 5874892 + unprocessed_pseudogene KNOWN OTTHUMG00000154351.1 933 933 1 ENSG00000180974.3 OR52E4 chr11 5884271 5885300 + protein_coding KNOWN OTTHUMG00000168804.1 1030 1030 1 ENSG00000159409.13 CELF3 chr1 151702404 151716814 - protein_coding KNOWN OTTHUMG00000013064.3 14411 4439 66 ENSG00000277932.1 OR52E5 chr11 5900777 5902090 + protein_coding KNOWN OTTHUMG00000187075.1 1314 1314 1 ENSG00000277514.1 OR52Q1P chr11 5903767 5904448 + unprocessed_pseudogene KNOWN OTTHUMG00000187076.1 682 682 1 ENSG00000255257.1 AC025016.1 chr11 5938751 5944984 + lincRNA NOVEL OTTHUMG00000165530.1 6234 573 3 ENSG00000184478.6 OR56A3 chr11 5947340 5948361 + protein_coding KNOWN OTTHUMG00000165373.1 1022 1022 1 ENSG00000188691.5 OR56A5 chr11 5967177 5968494 - protein_coding KNOWN OTTHUMG00000165730.2 1318 946 3 ENSG00000183313.4 OR52L1 chr11 5985892 5986985 - protein_coding KNOWN OTTHUMG00000165374.2 1094 1094 1 ENSG00000254831.1 KRT18P58 chr11 5993876 5994995 - processed_pseudogene KNOWN OTTHUMG00000165375.1 1120 1120 1 ENSG00000183389.4 OR56A4 chr11 6001986 6003194 - protein_coding KNOWN OTTHUMG00000165376.2 1209 1209 1 ENSG00000202147.1 RNA5SP329 chr11 6016996 6017114 + rRNA KNOWN NA 119 119 1 ENSG00000180934.5 OR56A1 chr11 6026671 6027741 - protein_coding KNOWN OTTHUMG00000165377.2 1071 1071 1 ENSG00000178796.11 RIIAD1 chr1 151710433 151729805 + protein_coding KNOWN OTTHUMG00000013055.4 19373 2261 28 ENSG00000255481.2 OR56A7P chr11 6045807 6046747 - unprocessed_pseudogene KNOWN OTTHUMG00000165731.2 941 941 1 ENSG00000262980.1 OR52L2P chr11 6057316 6058275 - unprocessed_pseudogene KNOWN OTTHUMG00000177791.1 960 960 1 ENSG00000234895.1 OR52X1P chr11 6066873 6067786 - unitary_pseudogene KNOWN OTTHUMG00000154352.1 914 914 1 ENSG00000180919.3 OR56B4 chr11 6107684 6108835 + protein_coding KNOWN OTTHUMG00000165531.1 1152 1152 1 ENSG00000254444.1 RP11-290F24.3 chr11 6108135 6185576 - sense_overlapping NOVEL OTTHUMG00000165532.1 77442 816 3 ENSG00000180913.3 OR56B3P chr11 6128610 6129556 + unprocessed_pseudogene KNOWN OTTHUMG00000187058.1 947 947 1 ENSG00000180909.2 OR52B1P chr11 6151641 6152549 - unprocessed_pseudogene KNOWN OTTHUMG00000187081.1 909 909 1 ENSG00000255307.1 OR52B2 chr11 6169330 6170408 - protein_coding KNOWN OTTHUMG00000165732.1 1079 1079 1 ENSG00000175485.2 OR52W1 chr11 6199146 6200259 + protein_coding KNOWN OTTHUMG00000165378.1 1114 1114 1 ENSG00000267940.1 RP11-290F24.6 chr11 6201901 6203253 - lincRNA NOVEL OTTHUMG00000183056.1 1353 1353 1 ENSG00000206980.1 RNU6-662P chr1 151747597 151747700 - snRNA KNOWN NA 104 104 1 ENSG00000180878.2 C11orf42 chr11 6205566 6211132 + protein_coding KNOWN OTTHUMG00000133377.2 5567 1142 3 ENSG00000051009.9 FAM160A2 chr11 6211335 6234711 - protein_coding KNOWN OTTHUMG00000133379.2 23377 4736 38 ENSG00000132259.11 CNGA4 chr11 6234765 6244429 + protein_coding KNOWN OTTHUMG00000165379.2 9665 2167 11 ENSG00000110148.8 CCKBR chr11 6259736 6272127 + protein_coding KNOWN OTTHUMG00000133380.3 12392 2655 20 ENSG00000270435.1 RP11-304C12.4 chr11 6297189 6298606 - processed_pseudogene KNOWN OTTHUMG00000184841.1 1418 1418 1 ENSG00000170955.9 PRKCDBP chr11 6318946 6320647 - protein_coding KNOWN OTTHUMG00000133378.3 1702 1672 9 ENSG00000254443.1 RP11-304C12.3 chr11 6362799 6365267 + lincRNA NOVEL OTTHUMG00000165915.1 2469 2469 3 ENSG00000166311.8 SMPD1 chr11 6390431 6394998 + protein_coding KNOWN OTTHUMG00000165453.4 4568 2750 42 ENSG00000166313.17 APBB1 chr11 6395124 6419414 - protein_coding KNOWN OTTHUMG00000165454.5 24291 5244 268 ENSG00000110169.9 HPX chr11 6431049 6442617 - protein_coding KNOWN OTTHUMG00000133399.3 11569 3631 61 ENSG00000171621.12 SPSB1 chr1 9292880 9369532 + protein_coding KNOWN OTTHUMG00000001279.3 76653 3403 10 ENSG00000269621.1 RP11-98D18.15 chr1 151755541 151759911 + antisense NOVEL OTTHUMG00000183004.1 4371 629 2 ENSG00000110171.17 TRIM3 chr11 6448613 6474459 - protein_coding KNOWN OTTHUMG00000133405.3 25847 6710 83 ENSG00000132254.11 ARFIP2 chr11 6474683 6481479 - protein_coding KNOWN OTTHUMG00000133406.6 6797 5312 59 ENSG00000132286.10 TIMM10B chr11 6481447 6484679 + protein_coding KNOWN OTTHUMG00000179826.1 3233 3041 14 ENSG00000265264.4 TIMM10B chr11 6481485 6508978 + protein_coding KNOWN OTTHUMG00000133400.3 27494 884 9 ENSG00000254595.1 CTD-2010I16.1 chr11 6488186 6489377 - processed_pseudogene KNOWN OTTHUMG00000165733.1 1192 686 2 ENSG00000179532.11 DNHD1 chr11 6497260 6593758 + protein_coding KNOWN OTTHUMG00000133403.5 96499 19629 192 ENSG00000132275.9 RRP8 chr11 6595075 6603620 - protein_coding KNOWN OTTHUMG00000165503.1 8546 6922 22 ENSG00000254400.1 RP11-732A19.8 chr11 6603642 6604420 - antisense NOVEL OTTHUMG00000166620.1 779 399 2 ENSG00000166333.12 ILK chr11 6603708 6610874 + protein_coding KNOWN OTTHUMG00000133407.5 7167 3484 135 ENSG00000166337.8 TAF10 chr11 6606296 6612667 - protein_coding KNOWN OTTHUMG00000133402.4 6372 6103 18 ENSG00000236940.1 RP11-98D18.7 chr1 151757659 151758442 + processed_pseudogene KNOWN OTTHUMG00000013056.2 784 462 2 ENSG00000254641.1 RP11-732A19.2 chr11 6608667 6610135 - sense_overlapping NOVEL OTTHUMG00000165504.1 1469 429 3 ENSG00000166340.13 TPP1 chr11 6612763 6619461 - protein_coding KNOWN OTTHUMG00000133404.4 6699 4901 85 ENSG00000255680.1 RP11-732A19.9 chr11 6618790 6619764 + antisense NOVEL OTTHUMG00000168089.1 975 464 2 ENSG00000166341.7 DCHS1 chr11 6621323 6655854 - protein_coding KNOWN OTTHUMG00000133398.3 34532 10765 21 ENSG00000255390.1 RP11-732A19.5 chr11 6621451 6622322 + antisense NOVEL OTTHUMG00000165533.1 872 820 2 ENSG00000255410.1 RP11-732A19.6 chr11 6630603 6635208 + antisense NOVEL OTTHUMG00000165534.1 4606 487 3 ENSG00000158042.8 MRPL17 chr11 6680782 6683401 - protein_coding KNOWN OTTHUMG00000165505.1 2620 2276 9 ENSG00000241678.1 RP11-732A19.1 chr11 6685891 6686369 - processed_pseudogene KNOWN OTTHUMG00000158289.2 479 479 1 ENSG00000254838.5 GVINP1 chr11 6713536 6746439 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000165506.5 32904 8438 3 ENSG00000254781.1 GVINP2 chr11 6748131 6750324 + processed_pseudogene KNOWN OTTHUMG00000165734.1 2194 2194 1 ENSG00000143436.9 MRPL9 chr1 151759643 151763564 - protein_coding KNOWN OTTHUMG00000013063.3 3922 1812 53 ENSG00000188124.2 OR2AG2 chr11 6767987 6769055 - protein_coding KNOWN OTTHUMG00000165868.1 1069 1069 1 ENSG00000279486.2 OR2AG1 chr11 6785017 6786014 + polymorphic_pseudogene KNOWN OTTHUMG00000165735.1 998 998 2 ENSG00000170803.5 OR2AG1 chr11 6785038 6785988 + protein_coding KNOWN NA 951 951 1 ENSG00000184933.4 OR6A2 chr11 6794627 6795783 - protein_coding KNOWN OTTHUMG00000165736.1 1157 1157 1 ENSG00000254712.1 RP11-560B16.5 chr11 6843664 6844666 - processed_pseudogene KNOWN OTTHUMG00000165737.1 1003 1003 1 ENSG00000166363.5 OR10A5 chr11 6845652 6846705 + protein_coding KNOWN OTTHUMG00000165738.1 1054 1054 1 ENSG00000170790.4 OR10A2 chr11 6869693 6870745 + protein_coding KNOWN OTTHUMG00000165739.1 1053 1053 1 ENSG00000170782.3 OR10A4 chr11 6876625 6877619 + protein_coding KNOWN OTTHUMG00000165740.1 995 995 1 ENSG00000166368.2 OR2D2 chr11 6891490 6892599 - protein_coding KNOWN OTTHUMG00000165741.1 1110 1110 1 ENSG00000178358.4 OR2D3 chr11 6920974 6922043 + protein_coding KNOWN OTTHUMG00000165742.1 1070 1070 1 ENSG00000143450.13 OAZ3 chr1 151762969 151771332 + protein_coding KNOWN OTTHUMG00000013061.6 8364 4349 32 ENSG00000149054.13 ZNF215 chr11 6926404 6984632 + protein_coding KNOWN OTTHUMG00000165507.3 58229 4025 42 ENSG00000149050.8 ZNF214 chr11 6999318 7020368 - protein_coding KNOWN OTTHUMG00000165618.1 21051 2949 14 ENSG00000158077.4 NLRP14 chr11 7020446 7071308 + protein_coding KNOWN OTTHUMG00000165508.1 50863 3628 12 ENSG00000170748.6 RBMXL2 chr11 7089027 7090900 + protein_coding KNOWN OTTHUMG00000165509.1 1874 1874 1 ENSG00000255179.1 RP11-324J3.1 chr11 7222933 7230863 + lincRNA NOVEL OTTHUMG00000165498.1 7931 529 2 ENSG00000221703.1 MIR302E chr11 7234766 7234837 + miRNA KNOWN NA 72 72 1 ENSG00000170743.15 SYT9 chr11 7238778 7469042 + protein_coding KNOWN OTTHUMG00000165499.2 230265 4727 22 ENSG00000251364.5 CTD-2516F10.2 chr11 7427266 7512515 - antisense NOVEL OTTHUMG00000165526.2 85250 7284 45 ENSG00000183801.6 OLFML1 chr11 7485388 7511377 + protein_coding KNOWN OTTHUMG00000165527.1 25990 3436 14 ENSG00000166387.10 PPFIBP2 chr11 7513298 7657127 + protein_coding KNOWN OTTHUMG00000165617.7 143830 9617 190 ENSG00000249602.1 RP11-98D18.3 chr1 151763384 151769501 - antisense NOVEL OTTHUMG00000045374.2 6118 382 3 ENSG00000254864.1 CTD-2516F10.4 chr11 7568866 7572046 - antisense NOVEL OTTHUMG00000165664.1 3181 550 2 ENSG00000166394.13 CYB5R2 chr11 7665100 7677222 - protein_coding KNOWN OTTHUMG00000165665.1 12123 8596 76 ENSG00000183378.10 OVCH2 chr11 7689438 7706421 - protein_coding KNOWN OTTHUMG00000165418.11 16984 2088 33 ENSG00000275612.1 RP11-35J10.6 chr11 7698951 7699393 - sense_intronic NOVEL OTTHUMG00000188330.1 443 443 1 ENSG00000276668.1 RP11-35J10.7 chr11 7699562 7699988 - sense_intronic NOVEL OTTHUMG00000188331.1 427 427 1 ENSG00000271758.2 RP11-35J10.5 chr11 7704628 7882947 - lincRNA KNOWN OTTHUMG00000165666.2 178320 589 6 ENSG00000254707.1 RP11-35J10.4 chr11 7705288 7709517 + antisense NOVEL OTTHUMG00000165667.1 4230 539 3 ENSG00000176716.4 OR10AB1P chr11 7728400 7729337 + unprocessed_pseudogene KNOWN OTTHUMG00000185959.1 938 938 1 ENSG00000227892.1 OR5P4P chr11 7745990 7746906 + unprocessed_pseudogene KNOWN OTTHUMG00000154328.1 917 917 1 ENSG00000254951.6 RP11-494M8.4 chr11 7754393 7905955 - sense_overlapping KNOWN OTTHUMG00000185711.1 151563 2822 17 ENSG00000232937.1 RP11-98D18.2 chr1 151765709 151766389 + sense_intronic NOVEL OTTHUMG00000045373.1 681 424 2 ENSG00000166408.4 OR5P1P chr11 7772890 7773814 - unprocessed_pseudogene KNOWN OTTHUMG00000154322.1 925 925 1 ENSG00000241008.1 RP11-494M8.1 chr11 7783697 7784407 + processed_pseudogene KNOWN OTTHUMG00000158302.1 711 711 1 ENSG00000183303.2 OR5P2 chr11 7795905 7796973 - protein_coding KNOWN OTTHUMG00000165668.1 1069 1069 1 ENSG00000182334.1 OR5P3 chr11 7825037 7825972 - protein_coding KNOWN OTTHUMG00000165669.1 936 936 1 ENSG00000170688.4 OR5E1P chr11 7848700 7849626 + unprocessed_pseudogene KNOWN OTTHUMG00000154333.1 927 927 1 ENSG00000252769.1 RNU6-943P chr11 7889182 7889279 - snRNA KNOWN NA 98 98 1 ENSG00000279000.1 OR10A6 chr11 7927633 7928662 - polymorphic_pseudogene KNOWN OTTHUMG00000165671.1 1030 1030 2 ENSG00000175393.3 OR10A6 chr11 7927718 7928662 - protein_coding KNOWN NA 945 945 1 ENSG00000170683.5 OR10A3 chr11 7938534 7939594 - protein_coding KNOWN OTTHUMG00000165672.1 1061 1061 1 ENSG00000182261.3 NLRP10 chr11 7959424 7965426 - protein_coding KNOWN OTTHUMG00000165673.1 6003 2531 4 ENSG00000268288.1 RP11-98D18.16 chr1 151766486 151767000 - antisense NOVEL OTTHUMG00000183005.1 515 515 1 ENSG00000175390.11 EIF3F chr11 7970251 8001862 + protein_coding KNOWN OTTHUMG00000165675.2 31612 9423 40 ENSG00000254642.1 COX6CP5 chr11 7977481 7977708 + processed_pseudogene KNOWN OTTHUMG00000165674.1 228 228 1 ENSG00000255420.1 CASC23 chr11 8011278 8016489 - antisense NOVEL OTTHUMG00000165689.1 5212 1563 3 ENSG00000166402.7 TUB chr11 8019244 8106112 + protein_coding KNOWN OTTHUMG00000165690.1 86869 6722 37 ENSG00000254921.1 RP11-236J17.6 chr11 8035446 8039718 - antisense NOVEL OTTHUMG00000165691.1 4273 1229 4 ENSG00000248332.5 TUB-AS1 chr11 8060038 8069373 + sense_intronic NOVEL OTTHUMG00000165692.1 9336 2021 7 ENSG00000279391.1 RP11-236J17.7 chr11 8075573 8077781 - TEC KNOWN OTTHUMG00000165693.1 2209 2209 1 ENSG00000166405.13 RIC3 chr11 8106093 8169055 - protein_coding KNOWN OTTHUMG00000165694.4 62963 7657 53 ENSG00000246820.2 RP11-379P15.1 chr11 8169167 8178903 + lincRNA NOVEL OTTHUMG00000165832.1 9737 3734 3 ENSG00000166407.12 LMO1 chr11 8224304 8268716 - protein_coding KNOWN OTTHUMG00000165833.2 44413 1690 16 ENSG00000182134.14 TDRKH chr1 151770107 151791416 - protein_coding KNOWN OTTHUMG00000013062.3 21310 5092 146 ENSG00000130413.14 STK33 chr11 8391868 8594289 - protein_coding KNOWN OTTHUMG00000140275.7 202422 7599 131 ENSG00000252778.1 SCARNA20 chr11 8555016 8555146 + scaRNA NOVEL NA 131 131 1 ENSG00000166436.14 TRIM66 chr11 8612037 8671866 - protein_coding KNOWN OTTHUMG00000150481.4 59830 10816 89 ENSG00000254900.1 RP11-152H18.4 chr11 8679089 8680913 + antisense NOVEL OTTHUMG00000165841.1 1825 537 2 ENSG00000166441.11 RPL27A chr11 8682411 8714759 + protein_coding KNOWN OTTHUMG00000165834.2 32349 7193 44 ENSG00000280884.1 AC091053.1 chr11 8684204 8684314 + miRNA NOVEL NA 111 111 1 ENSG00000200983.1 SNORA45A chr11 8684227 8684356 + snoRNA KNOWN NA 130 130 1 ENSG00000281902.1 AC091053.2 chr11 8685410 8685529 + miRNA NOVEL NA 120 120 1 ENSG00000212607.1 SNORA45B chr11 8685439 8685569 + snoRNA KNOWN NA 131 131 1 ENSG00000166444.16 ST5 chr11 8693351 8910951 - protein_coding KNOWN OTTHUMG00000165835.2 217601 14267 401 ENSG00000203288.3 RP11-98D18.9 chr1 151790804 151794402 + antisense NOVEL OTTHUMG00000013060.2 3599 1141 4 ENSG00000254665.1 RP11-152H18.3 chr11 8693357 8696607 + antisense NOVEL OTTHUMG00000165842.1 3251 744 2 ENSG00000255159.1 RP11-318C2.1 chr11 8768778 8810231 + antisense NOVEL OTTHUMG00000165652.1 41454 1255 9 ENSG00000252905.1 RNA5SP330 chr11 8845263 8845358 + rRNA KNOWN NA 96 96 1 ENSG00000202276.1 Y_RNA chr11 8877417 8877518 - misc_RNA NOVEL NA 102 102 1 ENSG00000166452.10 AKIP1 chr11 8911139 8920084 + protein_coding KNOWN OTTHUMG00000165653.1 8946 2300 50 ENSG00000176029.12 C11orf16 chr11 8920076 8933006 - protein_coding KNOWN OTTHUMG00000165654.2 12931 2607 30 ENSG00000176009.3 ASCL3 chr11 8937579 8938211 - protein_coding KNOWN OTTHUMG00000165679.1 633 633 1 ENSG00000223080.1 Y_RNA chr11 8943380 8943467 - misc_RNA NOVEL NA 88 88 1 ENSG00000175348.9 TMEM9B chr11 8947294 8965011 - protein_coding KNOWN OTTHUMG00000165676.1 17718 3064 22 ENSG00000254860.4 TMEM9B-AS1 chr11 8964675 8977527 + antisense KNOWN OTTHUMG00000165677.1 12853 1162 13 ENSG00000269489.1 RP11-98D18.17 chr1 151798054 151798602 + lincRNA NOVEL OTTHUMG00000183006.1 549 549 1 ENSG00000175352.9 NRIP3 chr11 8980576 9004049 - protein_coding KNOWN OTTHUMG00000165680.1 23474 4123 22 ENSG00000253973.2 RP11-467K18.2 chr11 9004162 9065154 + antisense NOVEL OTTHUMG00000163879.2 60993 1486 6 ENSG00000175356.11 SCUBE2 chr11 9020391 9138114 - protein_coding KNOWN OTTHUMG00000163880.4 117724 7099 95 ENSG00000264984.1 MIR5691 chr11 9090312 9090379 - miRNA KNOWN NA 68 68 1 ENSG00000213538.5 KRT8P41 chr11 9094377 9095890 + processed_pseudogene KNOWN OTTHUMG00000165715.1 1514 1514 1 ENSG00000184014.6 DENND5A chr11 9138825 9265390 - protein_coding KNOWN OTTHUMG00000165716.3 126566 8648 127 ENSG00000255097.1 RP11-5L12.1 chr11 9242448 9245509 - sense_intronic NOVEL OTTHUMG00000165718.1 3062 561 2 ENSG00000273725.1 Metazoa_SRP chr11 9279532 9279816 - misc_RNA NOVEL NA 285 285 1 ENSG00000166471.9 TMEM41B chr11 9280654 9314780 - protein_coding KNOWN OTTHUMG00000165719.2 34127 4422 42 ENSG00000254884.1 PRR13P2 chr11 9311284 9311689 - processed_pseudogene KNOWN OTTHUMG00000165752.1 406 406 1 ENSG00000252956.1 RNA5SP40 chr1 9437669 9437778 - rRNA KNOWN NA 110 110 1 ENSG00000213171.2 LINGO4 chr1 151800264 151806154 - protein_coding KNOWN OTTHUMG00000013059.1 5891 3379 2 ENSG00000205339.8 IPO7 chr11 9384622 9448126 + protein_coding KNOWN OTTHUMG00000165753.1 63505 7245 44 ENSG00000201998.1 SNORA23 chr11 9428773 9428954 + snoRNA KNOWN NA 182 182 1 ENSG00000254397.1 CTD-2371O3.2 chr11 9430356 9433486 - antisense NOVEL OTTHUMG00000165754.1 3131 597 2 ENSG00000278792.1 AC132192.1 chr11 9434165 9434251 + miRNA NOVEL NA 87 87 1 ENSG00000268403.2 CTD-2371O3.3 chr11 9459556 9460702 - antisense NOVEL OTTHUMG00000187446.1 1147 1147 1 ENSG00000166478.8 ZNF143 chr11 9460319 9528524 + protein_coding KNOWN OTTHUMG00000149922.3 68206 4233 143 ENSG00000277962.1 AC127030.1 chr11 9520689 9520799 + miRNA NOVEL NA 111 111 1 ENSG00000166483.9 WEE1 chr11 9573681 9593457 + protein_coding KNOWN OTTHUMG00000165863.2 19777 9239 51 ENSG00000238387.1 snoU13 chr11 9578028 9578131 + snoRNA NOVEL NA 104 104 1 ENSG00000243964.1 RP11-16F15.1 chr11 9606142 9606609 + processed_pseudogene KNOWN OTTHUMG00000158304.2 468 468 1 ENSG00000143365.15 RORC chr1 151806071 151831872 - protein_coding KNOWN OTTHUMG00000013053.1 25802 6109 23 ENSG00000255463.1 RP11-16F15.4 chr11 9631008 9631359 - processed_pseudogene KNOWN OTTHUMG00000165864.1 352 352 1 ENSG00000239470.3 RP11-16F15.2 chr11 9660438 9660920 + processed_pseudogene KNOWN OTTHUMG00000158305.1 483 483 1 ENSG00000133789.13 SWAP70 chr11 9664077 9752991 + protein_coding KNOWN OTTHUMG00000165865.2 88915 7190 54 ENSG00000201564.1 RN7SKP50 chr11 9680924 9681238 + misc_RNA KNOWN NA 315 315 1 ENSG00000245522.2 RP11-540A21.2 chr11 9754770 9759533 - lincRNA NOVEL OTTHUMG00000165874.1 4764 2632 5 ENSG00000246273.5 SBF2-AS1 chr11 9758292 9811319 + antisense NOVEL OTTHUMG00000165875.1 53028 3977 18 ENSG00000133812.13 SBF2 chr11 9778667 10294207 - protein_coding KNOWN OTTHUMG00000165890.2 515541 16767 159 ENSG00000255476.1 RP11-1H15.2 chr11 9839143 9929263 + antisense NOVEL OTTHUMG00000165891.1 90121 586 3 ENSG00000252568.1 RNU7-28P chr11 9843815 9843876 - snRNA KNOWN NA 62 62 1 ENSG00000254765.1 RP11-1H15.1 chr11 9958744 9959790 - processed_pseudogene KNOWN OTTHUMG00000165892.1 1047 1047 1 ENSG00000225556.1 C2CD4D chr1 151837819 151840557 - protein_coding KNOWN OTTHUMG00000167218.1 2739 1757 2 ENSG00000254865.1 RP11-748C4.1 chr11 10149192 10165109 + antisense NOVEL OTTHUMG00000165893.1 15918 522 2 ENSG00000254719.1 RP11-351I24.3 chr11 10272052 10272259 - processed_pseudogene KNOWN OTTHUMG00000166010.1 208 208 1 ENSG00000254554.1 RP11-351I24.1 chr11 10302657 10303704 - antisense NOVEL OTTHUMG00000165894.1 1048 803 2 ENSG00000148926.8 ADM chr11 10304680 10307397 + protein_coding KNOWN OTTHUMG00000165907.1 2718 2718 26 ENSG00000133805.14 AMPD3 chr11 10308313 10507579 + protein_coding KNOWN OTTHUMG00000165682.4 199267 6793 143 ENSG00000221574.1 RNU6ATAC33P chr11 10399192 10399317 - snRNA KNOWN NA 126 126 1 ENSG00000281108.1 AC021914.1 chr11 10494948 10495056 + miRNA NOVEL NA 109 109 1 ENSG00000255823.2 MTRNR2L8 chr11 10507887 10509189 - protein_coding KNOWN OTTHUMG00000184980.1 1303 1303 1 ENSG00000110315.5 RNF141 chr11 10511678 10541230 - protein_coding KNOWN OTTHUMG00000165712.1 29553 7820 22 ENSG00000177112.6 MRVI1-AS1 chr11 10541272 10599932 + antisense NOVEL OTTHUMG00000165772.2 58661 1403 13 ENSG00000201134.1 Y_RNA chr1 151841736 151841837 - misc_RNA NOVEL NA 102 102 1 ENSG00000133800.7 LYVE1 chr11 10556966 10611689 - protein_coding KNOWN OTTHUMG00000165713.1 54724 3515 20 ENSG00000072952.17 MRVI1 chr11 10573091 10693988 - protein_coding KNOWN OTTHUMG00000165773.6 120898 7700 227 ENSG00000206858.1 Y_RNA chr11 10725903 10726004 + misc_RNA NOVEL NA 102 102 1 ENSG00000198730.6 CTR9 chr11 10750987 10779743 + protein_coding KNOWN OTTHUMG00000165789.1 28757 5562 43 ENSG00000255125.1 RP11-685M7.5 chr11 10783313 10801625 + antisense NOVEL OTTHUMG00000165887.1 18313 441 3 ENSG00000110321.14 EIF4G2 chr11 10797050 10809110 - protein_coding KNOWN OTTHUMG00000165823.6 12061 8655 225 ENSG00000238622.1 SNORD97 chr11 10801467 10801608 - snoRNA KNOWN NA 142 142 1 ENSG00000246308.1 RP11-685M7.3 chr11 10809297 10822931 + antisense NOVEL OTTHUMG00000165807.1 13635 2335 3 ENSG00000236287.6 ZBED5 chr11 10812074 10858796 - protein_coding KNOWN OTTHUMG00000150341.3 46723 9029 32 ENSG00000247271.5 ZBED5-AS1 chr11 10858259 10906802 + antisense NOVEL OTTHUMG00000165888.1 48544 1995 8 ENSG00000234614.1 AL450992.2 chr1 151841877 151850385 + antisense NOVEL OTTHUMG00000013071.1 8509 506 3 ENSG00000250041.2 CTD-2003C8.2 chr11 10884885 10899322 - lincRNA NOVEL OTTHUMG00000165889.1 14438 947 4 ENSG00000254401.1 RP11-179A10.1 chr11 11117854 11183611 + lincRNA NOVEL OTTHUMG00000165895.1 65758 1833 7 ENSG00000254957.1 RP11-179A10.2 chr11 11135482 11137658 + processed_pseudogene KNOWN OTTHUMG00000165896.1 2177 1387 2 ENSG00000270897.1 RP11-179A10.3 chr11 11182107 11182413 - processed_pseudogene KNOWN OTTHUMG00000184837.1 307 307 1 ENSG00000255123.1 MTND5P21 chr11 11239759 11240280 + processed_pseudogene KNOWN OTTHUMG00000165725.1 522 522 1 ENSG00000255260.1 CTD-3224I3.3 chr11 11243188 11243715 - lincRNA NOVEL OTTHUMG00000165726.1 528 426 2 ENSG00000110328.5 GALNT18 chr11 11270876 11622005 - protein_coding KNOWN OTTHUMG00000165707.1 351130 3627 14 ENSG00000254598.2 CSNK2A3 chr11 11351942 11353357 - protein_coding KNOWN OTTHUMG00000165708.3 1416 1416 1 ENSG00000255351.1 RP11-567I13.1 chr11 11352426 11353307 + antisense NOVEL OTTHUMG00000165683.1 882 594 2 ENSG00000255462.1 RP11-483L5.1 chr11 11570084 11573782 + antisense NOVEL OTTHUMG00000165678.1 3699 372 2 ENSG00000196407.10 THEM5 chr1 151847263 151853697 - protein_coding KNOWN OTTHUMG00000013070.3 6435 984 9 ENSG00000266645.1 MIR4299 chr11 11656651 11656722 - miRNA KNOWN NA 72 72 1 ENSG00000280288.1 RP11-756D7.2 chr11 11725332 11726702 - TEC KNOWN OTTHUMG00000187478.1 1371 1371 1 ENSG00000255309.1 RP11-756D7.1 chr11 11759101 11759433 - processed_pseudogene KNOWN OTTHUMG00000165684.1 333 333 1 ENSG00000278645.1 AC104383.1 chr11 11783030 11783115 - miRNA NOVEL NA 86 86 1 ENSG00000278529.1 MIR8070 chr11 11783135 11783222 - miRNA KNOWN NA 88 88 1 ENSG00000170242.16 USP47 chr11 11841423 11959323 + protein_coding KNOWN OTTHUMG00000165685.5 117901 11158 115 ENSG00000255492.1 CTD-2381F24.1 chr11 11856490 11856859 - processed_pseudogene KNOWN OTTHUMG00000165686.1 370 370 1 ENSG00000050165.16 DKK3 chr11 11963106 12009769 - protein_coding KNOWN OTTHUMG00000165709.2 46664 5059 78 ENSG00000254486.1 RP13-631K18.2 chr11 12030875 12061785 + lincRNA NOVEL OTTHUMG00000165710.1 30911 3308 2 ENSG00000254991.1 RP13-631K18.3 chr11 12066929 12073014 + lincRNA NOVEL OTTHUMG00000165711.1 6086 899 2 ENSG00000159445.11 THEM4 chr1 151873584 151909808 - protein_coding KNOWN OTTHUMG00000013049.2 36225 4390 23 ENSG00000281672.1 AC124276.1 chr11 12084823 12084935 - miRNA NOVEL NA 113 113 1 ENSG00000255400.1 RP13-631K18.5 chr11 12086891 12089441 + lincRNA NOVEL OTTHUMG00000165727.1 2551 550 2 ENSG00000133816.12 MICAL2 chr11 12094008 12263789 + protein_coding KNOWN OTTHUMG00000165744.5 169782 15809 235 ENSG00000275373.1 MIR6124 chr11 12163683 12163767 + miRNA KNOWN NA 85 85 1 ENSG00000254680.1 RP11-265D17.2 chr11 12261426 12263173 - antisense NOVEL OTTHUMG00000165779.1 1748 500 2 ENSG00000133808.4 MICALCL chr11 12276080 12359144 + protein_coding KNOWN OTTHUMG00000165777.2 83065 3448 15 ENSG00000254983.1 RP11-573E11.2 chr11 12303533 12308216 + sense_intronic NOVEL OTTHUMG00000165818.1 4684 384 2 ENSG00000264283.1 AC025300.1 chr11 12344767 12344861 + miRNA NOVEL NA 95 95 1 ENSG00000197702.10 PARVA chr11 12377185 12530801 + protein_coding KNOWN OTTHUMG00000165778.3 153617 8294 41 ENSG00000254847.1 RP11-51B23.3 chr11 12538083 12540967 - lincRNA NOVEL OTTHUMG00000165780.1 2885 519 2 ENSG00000223810.2 KRT8P28 chr1 151949523 151950912 - processed_pseudogene KNOWN OTTHUMG00000013050.2 1390 1390 1 ENSG00000187079.13 TEAD1 chr11 12674591 12944483 + protein_coding KNOWN OTTHUMG00000165878.5 269893 10379 61 ENSG00000254688.1 RP11-47J17.3 chr11 12822435 12823667 - antisense NOVEL OTTHUMG00000165901.1 1233 489 2 ENSG00000255067.1 RP11-47J17.1 chr11 12848795 12849433 + sense_intronic NOVEL OTTHUMG00000165902.1 639 419 2 ENSG00000280762.1 AC013549.1 chr11 12904813 12904893 - miRNA NOVEL NA 81 81 1 ENSG00000252329.1 SCARNA16 chr11 12904817 12904988 - scaRNA NOVEL NA 172 172 1 ENSG00000203258.3 RP11-47J17.2 chr11 12921186 12922925 - antisense NOVEL OTTHUMG00000165903.1 1740 566 2 ENSG00000251381.5 LINC00958 chr11 12962510 12989548 - lincRNA NOVEL OTTHUMG00000165904.2 27039 2202 23 ENSG00000266625.1 AC084859.1 chr11 12963640 12963691 + miRNA NOVEL NA 52 52 1 ENSG00000254670.1 CTC-497E21.3 chr11 13001090 13009159 - lincRNA NOVEL OTTHUMG00000165905.1 8070 670 2 ENSG00000189431.7 RASSF10 chr11 13009577 13012106 + protein_coding KNOWN OTTHUMG00000166184.2 2530 2530 1 ENSG00000197747.7 S100A10 chr1 151982915 151994390 - protein_coding KNOWN OTTHUMG00000013068.2 11476 1543 13 ENSG00000255558.1 CTC-497E21.5 chr11 13054615 13134839 - lincRNA NOVEL OTTHUMG00000165950.1 80225 467 2 ENSG00000255018.1 RP11-413N13.1 chr11 13152200 13152348 + processed_pseudogene KNOWN OTTHUMG00000165782.1 149 149 1 ENSG00000133794.16 ARNTL chr11 13276652 13387266 + protein_coding KNOWN OTTHUMG00000150623.6 110615 6726 186 ENSG00000222162.1 RN7SKP151 chr11 13353208 13353523 + misc_RNA KNOWN NA 316 316 1 ENSG00000148925.9 BTBD10 chr11 13388001 13463297 - protein_coding KNOWN OTTHUMG00000165787.5 75297 3495 67 ENSG00000254583.1 RP11-15D14.1 chr11 13478333 13479037 + processed_pseudogene KNOWN OTTHUMG00000165783.2 705 705 1 ENSG00000255401.1 RP11-15D14.2 chr11 13488612 13489390 + unprocessed_pseudogene KNOWN OTTHUMG00000165784.1 779 330 2 ENSG00000152266.5 PTH chr11 13492055 13496181 - protein_coding KNOWN OTTHUMG00000165785.2 4127 953 6 ENSG00000228901.3 HMGN2P36 chr11 13610363 13610771 - processed_pseudogene KNOWN OTTHUMG00000165786.2 409 409 1 ENSG00000197601.11 FAR1 chr11 13668670 13732346 + protein_coding KNOWN OTTHUMG00000165743.5 63677 7501 35 ENSG00000229021.2 AL591893.1 chr1 151994531 152042774 + antisense NOVEL OTTHUMG00000013054.1 48244 4109 13 ENSG00000254791.1 FAR1-IT1 chr11 13669327 13670149 + sense_intronic NOVEL OTTHUMG00000165788.1 823 368 2 ENSG00000240454.1 RPL39P26 chr11 13685499 13685656 - processed_pseudogene KNOWN OTTHUMG00000158307.1 158 158 1 ENSG00000200685.1 Y_RNA chr11 13686550 13686658 - misc_RNA NOVEL NA 109 109 1 ENSG00000255075.1 CENPUP1 chr11 13756027 13757560 + processed_pseudogene KNOWN OTTHUMG00000165745.1 1534 1202 2 ENSG00000255088.1 RP11-23B7.4 chr11 13758111 13758345 - processed_pseudogene KNOWN OTTHUMG00000165746.1 235 235 1 ENSG00000255411.1 RP11-98J9.1 chr11 13785390 13848002 + lincRNA NOVEL OTTHUMG00000165747.1 62613 484 3 ENSG00000254927.1 RP11-98J9.2 chr11 13826843 13879499 - lincRNA NOVEL OTTHUMG00000165748.1 52657 516 2 ENSG00000254930.1 RP11-98J9.3 chr11 13844862 13870616 - lincRNA NOVEL OTTHUMG00000165749.1 25755 306 4 ENSG00000201856.1 RNA5SP331 chr11 13907484 13907590 - rRNA KNOWN NA 107 107 1 ENSG00000254438.1 RP11-231N3.1 chr11 13921450 13924863 - lincRNA NOVEL OTTHUMG00000165750.1 3414 684 2 ENSG00000233653.3 CICP7 chr1 487101 489906 + processed_pseudogene KNOWN OTTHUMG00000057429.3 2806 2477 2 ENSG00000235263.1 RP13-392I16.1 chr1 9501092 9503471 - lincRNA NOVEL OTTHUMG00000001278.1 2380 708 2 ENSG00000240667.1 AL450992.6 chr1 152018662 152022508 + unprocessed_pseudogene KNOWN OTTHUMG00000013051.1 3847 568 4 ENSG00000262655.3 SPON1 chr11 13962689 14267884 + protein_coding KNOWN OTTHUMG00000181576.3 305196 5102 18 ENSG00000277787.1 AC074191.1 chr11 13977938 13978043 + miRNA NOVEL NA 106 106 1 ENSG00000212365.1 RNA5SP332 chr11 14134986 14135100 + rRNA KNOWN NA 115 115 1 ENSG00000254418.1 RP11-21L19.1 chr11 14262846 14273691 - antisense NOVEL OTTHUMG00000165755.1 10846 240 2 ENSG00000133818.11 RRAS2 chr11 14277926 14364506 - protein_coding KNOWN OTTHUMG00000165756.1 86581 3453 72 ENSG00000255074.1 RP11-140L24.3 chr11 14440787 14441677 + processed_pseudogene KNOWN OTTHUMG00000165957.1 891 512 2 ENSG00000129083.11 COPB1 chr11 14443440 14500027 - protein_coding KNOWN OTTHUMG00000165824.1 56588 5131 88 ENSG00000251991.1 RNU7-49P chr11 14478892 14478953 + snRNA KNOWN NA 62 62 1 ENSG00000256206.2 PSMA1 chr11 14493783 14520344 - protein_coding NOVEL OTTHUMG00000168126.1 26562 1221 12 ENSG00000129084.16 PSMA1 chr11 14504874 14643635 - protein_coding KNOWN OTTHUMG00000165825.4 138762 3301 74 ENSG00000163191.5 S100A11 chr1 152032506 152047907 - protein_coding KNOWN OTTHUMG00000013069.1 15402 680 6 ENSG00000152270.7 PDE3B chr11 14643723 14872044 + protein_coding KNOWN OTTHUMG00000165898.2 228322 11707 40 ENSG00000255040.1 RP11-677N16.1 chr11 14673606 14674555 - processed_pseudogene KNOWN OTTHUMG00000165899.1 950 950 1 ENSG00000186104.9 CYP2R1 chr11 14877440 14892252 - protein_coding KNOWN OTTHUMG00000165900.4 14813 4516 40 ENSG00000175868.12 CALCB chr11 14904997 15082342 + protein_coding KNOWN OTTHUMG00000164629.22 177346 3937 20 ENSG00000253179.1 CALCP chr11 14907518 14907986 + unprocessed_pseudogene KNOWN OTTHUMG00000164573.23 469 212 2 ENSG00000110680.11 CALCA chr11 14966668 14972354 - protein_coding KNOWN OTTHUMG00000159731.3 5687 2128 26 ENSG00000250640.2 OR7E41P chr11 14987671 14988694 - unprocessed_pseudogene KNOWN OTTHUMG00000164630.1 1024 1024 1 ENSG00000188487.10 INSC chr11 15112424 15247208 + protein_coding KNOWN OTTHUMG00000165838.3 134785 3435 88 ENSG00000276762.1 AC105179.1 chr11 15378531 15378615 + miRNA NOVEL NA 85 85 1 ENSG00000253072.1 snoMBII-202 chr11 15481808 15481893 - snoRNA NOVEL NA 86 86 1 ENSG00000232678.2 SPTLC1P4 chr1 152077952 152078211 + processed_pseudogene KNOWN OTTHUMG00000013057.2 260 260 1 ENSG00000254946.1 RP11-531H8.1 chr11 15552855 15591098 + lincRNA NOVEL OTTHUMG00000165839.1 38244 571 5 ENSG00000254789.1 RP11-531H8.2 chr11 15572023 15622391 - lincRNA NOVEL OTTHUMG00000165840.1 50369 465 2 ENSG00000254695.1 RP11-396O20.1 chr11 15643885 15705368 + lincRNA NOVEL OTTHUMG00000165843.1 61484 471 3 ENSG00000254645.1 RP11-396O20.2 chr11 15701963 15758898 - lincRNA NOVEL OTTHUMG00000166009.1 56936 993 9 ENSG00000254661.2 RP11-222N13.1 chr11 15910957 15927443 + lincRNA NOVEL OTTHUMG00000165844.1 16487 528 4 ENSG00000110693.14 SOX6 chr11 15966449 16739591 - protein_coding KNOWN OTTHUMG00000165876.6 773143 19636 131 ENSG00000274140.1 MIR6073 chr11 15969533 15969621 - miRNA KNOWN NA 89 89 1 ENSG00000254878.1 CTD-3096P4.1 chr11 16023190 16031515 + antisense NOVEL OTTHUMG00000165846.1 8326 197 2 ENSG00000221556.1 AC103794.1 chr11 16124316 16124396 + miRNA NOVEL NA 81 81 1 ENSG00000213785.3 RP11-449L13.2 chr11 16484084 16484671 - processed_pseudogene KNOWN OTTHUMG00000165909.1 588 588 1 ENSG00000182898.3 TCHHL1 chr1 152084144 152089064 - protein_coding KNOWN OTTHUMG00000013058.2 4921 3603 3 ENSG00000241943.2 RN7SL188P chr11 16576851 16577135 + misc_RNA KNOWN NA 285 285 1 ENSG00000110696.8 C11orf58 chr11 16613132 16756881 + protein_coding KNOWN OTTHUMG00000165910.4 143750 8675 35 ENSG00000166689.13 PLEKHA7 chr11 16778295 17014443 - protein_coding KNOWN OTTHUMG00000165954.2 236149 9575 131 ENSG00000199883.1 RN7SKP90 chr11 16842253 16842587 + misc_RNA KNOWN NA 335 335 1 ENSG00000244398.1 RP11-466H18.1 chr11 16974693 16975013 - processed_pseudogene KNOWN OTTHUMG00000158484.1 321 321 1 ENSG00000266493.1 AC116533.3 chr11 17007878 17007968 - miRNA NOVEL NA 91 91 1 ENSG00000184669.7 OR7E14P chr11 17013998 17053024 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000165955.3 39027 1370 3 ENSG00000264378.1 AC116533.2 chr11 17054912 17055007 + miRNA NOVEL NA 96 96 1 ENSG00000221322.1 AC116533.1 chr11 17073952 17074035 + miRNA NOVEL NA 84 84 1 ENSG00000110700.5 RPS13 chr11 17074389 17077787 - protein_coding KNOWN OTTHUMG00000165988.3 3399 2186 40 ENSG00000159450.11 TCHH chr1 152106317 152115454 - protein_coding KNOWN OTTHUMG00000013066.2 9138 6995 5 ENSG00000272034.1 SNORD14A chr11 17074654 17074744 - snoRNA KNOWN NA 91 91 1 ENSG00000201403.1 SNORD14B chr11 17075779 17075868 - snoRNA KNOWN NA 90 90 1 ENSG00000011405.12 PIK3C2A chr11 17077730 17207983 - protein_coding KNOWN OTTHUMG00000166036.1 130254 9204 57 ENSG00000278353.1 AC116533.4 chr11 17092784 17092888 - miRNA NOVEL NA 105 105 1 ENSG00000201586.1 RNU6-593P chr11 17115652 17115763 - snRNA KNOWN NA 112 112 1 ENSG00000240808.1 CTD-3236F5.1 chr11 17137976 17138265 - processed_pseudogene KNOWN OTTHUMG00000158308.1 290 290 1 ENSG00000213779.4 RP11-452G18.1 chr11 17193489 17194308 + processed_pseudogene KNOWN OTTHUMG00000158312.1 820 454 2 ENSG00000070081.14 NUCB2 chr11 17208153 17349974 + protein_coding KNOWN OTTHUMG00000166050.5 141822 8995 142 ENSG00000197149.5 RP11-452G18.2 chr11 17228279 17229151 + processed_pseudogene KNOWN OTTHUMG00000158315.1 873 873 1 ENSG00000188211.7 NCR3LG1 chr11 17351726 17377341 + protein_coding KNOWN OTTHUMG00000165913.3 25616 6438 11 ENSG00000226716.1 AL589986.2 chr1 152122534 152125065 + antisense NOVEL OTTHUMG00000013065.1 2532 789 2 ENSG00000260196.1 RP1-239B22.5 chr11 17380649 17383531 + antisense NOVEL OTTHUMG00000173015.1 2883 2883 1 ENSG00000187486.5 KCNJ11 chr11 17385859 17389331 - protein_coding KNOWN OTTHUMG00000165914.1 3473 3204 10 ENSG00000006071.10 ABCC8 chr11 17392885 17476845 - protein_coding KNOWN OTTHUMG00000166316.1 83961 6778 199 ENSG00000255035.2 SDHCP4 chr11 17435672 17436181 - processed_pseudogene KNOWN OTTHUMG00000166317.2 510 510 1 ENSG00000006611.14 USH1C chr11 17493895 17544416 - protein_coding KNOWN OTTHUMG00000166323.1 50522 4904 137 ENSG00000188162.9 OTOG chr11 17547373 17647150 + protein_coding KNOWN OTTHUMG00000149905.2 99778 10709 156 ENSG00000254586.1 RP11-358H18.3 chr11 17695022 17697471 + lincRNA NOVEL OTTHUMG00000166356.1 2450 846 5 ENSG00000255335.1 RP11-358H18.2 chr11 17695267 17696940 - antisense NOVEL OTTHUMG00000166357.1 1674 556 2 ENSG00000129152.3 MYOD1 chr11 17719568 17722131 + protein_coding KNOWN OTTHUMG00000166358.1 2564 1801 3 ENSG00000129159.6 KCNC1 chr11 17734812 17783055 + protein_coding KNOWN OTTHUMG00000166359.1 48244 9842 10 ENSG00000233792.3 HDHD1P2 chr1 152124016 152196699 - transcribed_processed_pseudogene KNOWN OTTHUMG00000013067.3 72684 1112 3 ENSG00000129158.9 SERGEF chr11 17788048 18013162 - protein_coding KNOWN OTTHUMG00000166420.1 225115 3502 150 ENSG00000255448.1 RP1-59M18.2 chr11 18000542 18022931 - processed_transcript NOVEL OTTHUMG00000166394.2 22390 688 6 ENSG00000129167.8 TPH1 chr11 18017564 18042426 - protein_coding KNOWN OTTHUMG00000166421.1 24863 5626 26 ENSG00000166788.8 SAAL1 chr11 18069935 18106091 - protein_coding KNOWN OTTHUMG00000166428.1 36157 3070 100 ENSG00000255254.1 HIGD1AP5 chr11 18106583 18106841 + processed_pseudogene KNOWN OTTHUMG00000166432.1 259 259 1 ENSG00000166787.3 SAA3P chr11 18112472 18116132 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000166433.1 3661 653 6 ENSG00000255071.2 SAA2-SAA4 chr11 18112617 18248635 - protein_coding KNOWN OTTHUMG00000166482.2 136019 882 9 ENSG00000179826.6 MRGPRX3 chr11 18120955 18138480 + protein_coding KNOWN OTTHUMG00000166435.1 17526 1741 7 ENSG00000255470.1 RP11-113D6.6 chr11 18140186 18189495 - lincRNA NOVEL OTTHUMG00000166434.2 49310 1027 2 ENSG00000254857.1 RP11-113D6.3 chr11 18153277 18154255 + processed_pseudogene KNOWN OTTHUMG00000166436.1 979 979 1 ENSG00000215853.3 RPTN chr1 152153595 152159228 - protein_coding KNOWN OTTHUMG00000154095.1 5634 3569 3 ENSG00000179817.4 MRGPRX4 chr11 18172837 18197348 + protein_coding KNOWN OTTHUMG00000166442.1 24512 1655 3 ENSG00000255138.1 GLTPP1 chr11 18189000 18189621 + processed_pseudogene KNOWN OTTHUMG00000166443.1 622 622 1 ENSG00000254546.1 RP11-113D6.9 chr11 18196657 18197337 + processed_pseudogene KNOWN OTTHUMG00000166444.1 681 681 1 ENSG00000189332.5 RP11-113D6.10 chr11 18209138 18214562 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000166445.3 5425 3839 8 ENSG00000148965.7 SAA4 chr11 18231349 18236893 - protein_coding KNOWN OTTHUMG00000166483.1 5545 727 4 ENSG00000134339.7 SAA2 chr11 18239223 18248643 - protein_coding KNOWN OTTHUMG00000166484.1 9421 2227 24 ENSG00000200336.1 RNA5SP333 chr11 18248389 18248506 - rRNA KNOWN NA 118 118 1 ENSG00000212789.4 ST13P5 chr11 18261982 18263091 + processed_pseudogene KNOWN OTTHUMG00000165956.3 1110 1110 1 ENSG00000173432.9 SAA1 chr11 18266174 18269977 + protein_coding KNOWN OTTHUMG00000166147.3 3804 765 13 ENSG00000201695.1 RNA5SP334 chr11 18266393 18266510 + rRNA KNOWN NA 118 118 1 ENSG00000237975.5 FLG-AS1 chr1 152168125 152445456 + antisense NOVEL OTTHUMG00000012203.5 277332 7691 36 ENSG00000110756.16 HPS5 chr11 18278668 18322198 - protein_coding KNOWN OTTHUMG00000166612.5 43531 6433 115 ENSG00000110768.10 GTF2H1 chr11 18322295 18367044 + protein_coding KNOWN OTTHUMG00000167690.5 44750 6939 108 ENSG00000264603.1 MIR3159 chr11 18387787 18387860 + miRNA KNOWN NA 74 74 1 ENSG00000134333.12 LDHA chr11 18394388 18408425 + protein_coding KNOWN OTTHUMG00000167721.2 14038 6210 133 ENSG00000256006.1 AC084117.3 chr11 18405609 18406731 + sense_intronic NOVEL OTTHUMG00000133752.2 1123 270 2 ENSG00000166796.10 LDHC chr11 18412307 18452058 + protein_coding KNOWN OTTHUMG00000167722.1 39752 2095 61 ENSG00000256734.1 RP11-613F22.7 chr11 18450112 18450868 - processed_pseudogene KNOWN OTTHUMG00000167723.1 757 757 1 ENSG00000166800.8 LDHAL6A chr11 18455824 18479600 + protein_coding KNOWN OTTHUMG00000167724.1 23777 2586 23 ENSG00000074319.11 TSG101 chr11 18468336 18527232 - protein_coding KNOWN OTTHUMG00000167725.3 58897 3839 66 ENSG00000256464.1 YWHABP2 chr11 18490243 18490955 - processed_pseudogene KNOWN OTTHUMG00000167726.1 713 713 1 ENSG00000236427.1 RP11-107M16.2 chr1 152205858 152207057 + lincRNA NOVEL OTTHUMG00000012244.1 1200 397 2 ENSG00000256588.1 RP11-613F22.8 chr11 18507608 18508820 - sense_intronic NOVEL OTTHUMG00000167727.1 1213 630 2 ENSG00000256361.1 RP11-613F22.6 chr11 18511043 18511475 - processed_pseudogene KNOWN OTTHUMG00000167728.1 433 433 1 ENSG00000151116.15 UEVLD chr11 18529609 18588747 - protein_coding KNOWN OTTHUMG00000167729.3 59139 5515 108 ENSG00000274589.1 Metazoa_SRP chr11 18538885 18539189 + misc_RNA NOVEL NA 305 305 1 ENSG00000256282.1 RP11-504G3.4 chr11 18595459 18599683 - transcribed_processed_pseudogene KNOWN OTTHUMG00000167730.1 4225 1366 6 ENSG00000247595.2 SPTY2D1-AS1 chr11 18599787 18610255 + processed_transcript NOVEL OTTHUMG00000167731.1 10469 1940 10 ENSG00000279837.1 RP11-504G3.2 chr11 18601882 18602649 + TEC KNOWN OTTHUMG00000167732.1 768 768 1 ENSG00000179119.13 SPTY2D1 chr11 18606401 18634791 - protein_coding KNOWN OTTHUMG00000167733.1 28391 6005 13 ENSG00000257043.1 RP11-137N23.1 chr11 18665050 18665548 + processed_pseudogene KNOWN OTTHUMG00000167734.1 499 499 1 ENSG00000151117.7 TMEM86A chr11 18693122 18704785 + protein_coding KNOWN OTTHUMG00000167680.1 11664 4243 15 ENSG00000171612.6 SLC25A33 chr1 9539482 9585179 + protein_coding KNOWN OTTHUMG00000001322.2 45698 3854 7 ENSG00000197915.5 HRNR chr1 152212082 152224193 - protein_coding KNOWN OTTHUMG00000012243.1 12112 9623 3 ENSG00000179057.12 IGSF22 chr11 18704305 18726230 - protein_coding KNOWN OTTHUMG00000160502.3 21926 4841 69 ENSG00000254966.1 RP11-1081L13.4 chr11 18706537 18740568 + antisense NOVEL OTTHUMG00000166097.1 34032 874 3 ENSG00000110786.16 PTPN5 chr11 18727928 18792721 - protein_coding KNOWN OTTHUMG00000134304.3 64794 5497 63 ENSG00000276789.1 RP11-1081L13.5 chr11 18836304 18837081 + processed_pseudogene KNOWN OTTHUMG00000187731.1 778 778 1 ENSG00000254529.1 RP11-583F24.7 chr11 18863558 18864509 - unprocessed_pseudogene KNOWN OTTHUMG00000166458.1 952 952 1 ENSG00000255511.1 RP11-1081L13.3 chr11 18870989 18873462 - processed_pseudogene KNOWN OTTHUMG00000166459.1 2474 1718 2 ENSG00000254541.1 RP11-583F24.6 chr11 18886933 18887920 - unprocessed_pseudogene KNOWN OTTHUMG00000166460.1 988 988 1 ENSG00000255536.1 RP11-583F24.5 chr11 18910436 18911396 - unprocessed_pseudogene KNOWN OTTHUMG00000166461.1 961 961 1 ENSG00000170255.7 MRGPRX1 chr11 18933813 18939507 - protein_coding KNOWN OTTHUMG00000162655.2 5695 1418 3 ENSG00000255244.1 RP11-583F24.8 chr11 18934985 18939721 + antisense NOVEL OTTHUMG00000167394.1 4737 707 2 ENSG00000143631.10 FLG chr1 152302175 152325203 - protein_coding KNOWN OTTHUMG00000012202.1 23029 12747 3 ENSG00000254738.1 RP11-583F24.4 chr11 18956055 18957015 - unprocessed_pseudogene KNOWN OTTHUMG00000166462.2 961 961 1 ENSG00000254720.1 RP11-583F24.3 chr11 18971746 18972703 - unprocessed_pseudogene KNOWN OTTHUMG00000166463.1 958 958 1 ENSG00000255424.1 RP11-589F4.2 chr11 19029697 19030438 - unprocessed_pseudogene KNOWN OTTHUMG00000166464.1 742 742 1 ENSG00000183695.2 MRGPRX2 chr11 19054455 19060681 - protein_coding KNOWN OTTHUMG00000166098.1 6227 2036 2 ENSG00000177054.12 ZDHHC13 chr11 19117099 19176422 + protein_coding KNOWN OTTHUMG00000166099.3 59324 7763 69 ENSG00000129170.7 CSRP3 chr11 19182030 19210573 - protein_coding KNOWN OTTHUMG00000166100.2 28544 1466 13 ENSG00000255308.1 RP11-428C19.4 chr11 19196775 19281426 + antisense NOVEL OTTHUMG00000166101.1 84652 516 4 ENSG00000129173.11 E2F8 chr11 19224063 19241620 - protein_coding KNOWN OTTHUMG00000166102.3 17558 4140 45 ENSG00000254544.1 PCNAP4 chr11 19274540 19275269 - processed_pseudogene KNOWN OTTHUMG00000167395.1 730 730 1 ENSG00000255160.4 RP11-428C19.5 chr11 19299883 19308358 + lincRNA NOVEL OTTHUMG00000166465.2 8476 648 7 ENSG00000143520.6 FLG2 chr1 152348735 152360006 - protein_coding KNOWN OTTHUMG00000012245.9 11272 9124 3 ENSG00000166833.18 NAV2 chr11 19350724 20121598 + protein_coding KNOWN OTTHUMG00000151837.4 770875 14535 303 ENSG00000255270.1 NAV2-IT1 chr11 19380484 19385014 + sense_intronic NOVEL OTTHUMG00000166103.1 4531 506 2 ENSG00000200687.1 RNA5SP335 chr11 19401872 19401981 - rRNA KNOWN NA 110 110 1 ENSG00000255043.1 NAV2-AS5 chr11 19502672 19507229 - antisense NOVEL OTTHUMG00000166104.1 4558 3510 6 ENSG00000254622.1 NAV2-AS4 chr11 19510890 19519896 - antisense NOVEL OTTHUMG00000166105.1 9007 1181 3 ENSG00000265210.1 MIR4486 chr11 19575310 19575372 + miRNA KNOWN NA 63 63 1 ENSG00000207407.1 SNORA1 chr11 19591156 19591291 - snoRNA NOVEL NA 136 136 1 ENSG00000270607.1 RP11-359E10.1 chr11 19710934 19712619 - lincRNA NOVEL OTTHUMG00000185180.1 1686 1686 1 ENSG00000264309.1 MIR4694 chr11 19760004 19760083 - miRNA KNOWN NA 80 80 1 ENSG00000254542.1 NAV2-AS3 chr11 19978699 19981337 - antisense NOVEL OTTHUMG00000167396.1 2639 598 2 ENSG00000183586.8 HMGN3P1 chr1 152399577 152399769 + processed_pseudogene KNOWN OTTHUMG00000012385.2 193 193 1 ENSG00000254453.1 NAV2-AS2 chr11 20043846 20049303 - antisense NOVEL OTTHUMG00000167397.1 5458 782 2 ENSG00000254894.1 NAV2-AS1 chr11 20119684 20120632 - antisense NOVEL OTTHUMG00000167398.1 949 660 2 ENSG00000279266.1 RP11-371I20.2 chr11 20131730 20135465 + TEC KNOWN OTTHUMG00000170883.1 3736 3736 1 ENSG00000109851.6 DBX1 chr11 20156155 20160613 - protein_coding KNOWN OTTHUMG00000166043.2 4459 1380 4 ENSG00000109854.12 HTATIP2 chr11 20363685 20383783 + protein_coding KNOWN OTTHUMG00000166015.6 20099 2797 38 ENSG00000185238.11 PRMT3 chr11 20387530 20509294 + protein_coding KNOWN OTTHUMG00000166022.3 121765 5467 63 ENSG00000276401.1 AC090707.1 chr11 20568317 20568384 - miRNA NOVEL NA 68 68 1 ENSG00000255291.1 RP11-701I24.1 chr11 20574186 20574950 + processed_pseudogene KNOWN OTTHUMG00000166023.1 765 464 2 ENSG00000165970.10 SLC6A5 chr11 20599400 20659285 + protein_coding KNOWN OTTHUMG00000166024.3 59886 7114 39 ENSG00000165973.16 NELL1 chr11 20669551 21575681 + protein_coding KNOWN OTTHUMG00000166042.2 906131 5309 132 ENSG00000143536.7 CRNN chr1 152409243 152414263 - protein_coding KNOWN OTTHUMG00000012383.1 5021 1902 3 ENSG00000254906.1 RP11-701I24.3 chr11 20670425 20671297 - antisense NOVEL OTTHUMG00000166044.1 873 396 2 ENSG00000201059.1 RNA5SP336 chr11 21000881 21000997 - rRNA KNOWN NA 117 117 1 ENSG00000254816.1 RP11-670N15.2 chr11 21169748 21170137 + processed_pseudogene KNOWN OTTHUMG00000166045.1 390 390 1 ENSG00000255167.1 RP11-670N15.1 chr11 21260061 21262570 - antisense NOVEL OTTHUMG00000166046.1 2510 723 2 ENSG00000225477.3 CTD-2302A16.2 chr11 21283779 21284955 + processed_pseudogene KNOWN OTTHUMG00000166204.1 1177 1177 1 ENSG00000252816.1 RNA5SP337 chr11 21383801 21383909 - rRNA KNOWN NA 109 109 1 ENSG00000254820.1 CTD-2019O4.1 chr11 22113448 22117001 + lincRNA NOVEL OTTHUMG00000166062.1 3554 477 2 ENSG00000171714.10 ANO5 chr11 22193176 22283357 + protein_coding KNOWN OTTHUMG00000166051.2 90182 6900 27 ENSG00000255372.1 CTD-3064C13.1 chr11 22261209 22262256 - antisense NOVEL OTTHUMG00000166052.1 1048 516 2 ENSG00000254768.4 CTD-2140G10.2 chr11 22283730 22338245 - antisense NOVEL OTTHUMG00000166053.1 54516 1271 8 ENSG00000186207.4 LCE5A chr1 152510844 152512177 + protein_coding KNOWN OTTHUMG00000014401.1 1334 819 2 ENSG00000091664.7 SLC17A6 chr11 22338097 22379503 + protein_coding KNOWN OTTHUMG00000166063.1 41407 4219 15 ENSG00000254540.1 CTD-2140G10.4 chr11 22361213 22362294 - antisense NOVEL OTTHUMG00000166064.1 1082 172 2 ENSG00000255323.4 LINC01495 chr11 22445688 22492019 - lincRNA NOVEL OTTHUMG00000166054.1 46332 684 6 ENSG00000255357.1 RP11-34N19.1 chr11 22492112 22502846 + lincRNA NOVEL OTTHUMG00000166055.1 10735 281 2 ENSG00000183161.4 FANCF chr11 22622519 22626787 - protein_coding KNOWN OTTHUMG00000166070.2 4269 4269 1 ENSG00000148935.9 GAS2 chr11 22625642 22813055 + protein_coding KNOWN OTTHUMG00000166071.3 187414 3529 56 ENSG00000222427.1 RNA5SP338 chr11 22688351 22688435 + rRNA KNOWN NA 85 85 1 ENSG00000198168.7 SVIP chr11 22813799 22830299 - protein_coding KNOWN OTTHUMG00000166072.3 16501 5263 19 ENSG00000246225.5 RP11-17A1.3 chr11 22829380 22945393 + antisense NOVEL OTTHUMG00000166073.2 116014 2421 13 ENSG00000255359.2 CCDC179 chr11 22846931 22860426 - protein_coding KNOWN OTTHUMG00000166074.2 13496 917 6 ENSG00000244057.3 LCE3C chr1 152511535 152601086 + protein_coding KNOWN OTTHUMG00000014403.2 89552 469 3 ENSG00000255418.4 RP11-266A24.1 chr11 23164900 23203161 + lincRNA NOVEL OTTHUMG00000166075.1 38262 930 11 ENSG00000271491.1 RP11-787P24.4 chr11 23370116 23377644 - processed_pseudogene KNOWN OTTHUMG00000184834.1 7529 693 2 ENSG00000255293.1 RP11-787P24.1 chr11 23403805 23406103 + processed_pseudogene KNOWN OTTHUMG00000166083.2 2299 2299 1 ENSG00000275868.1 MIR8054 chr11 23419105 23419190 - miRNA KNOWN NA 86 86 1 ENSG00000254564.1 RP11-787P24.2 chr11 23431677 23431799 + processed_pseudogene KNOWN OTTHUMG00000166084.1 123 123 1 ENSG00000264478.1 AC100767.1 chr11 23471644 23471713 - miRNA NOVEL NA 70 70 1 ENSG00000254465.1 PRKRIRP4 chr11 23478068 23480430 + processed_pseudogene KNOWN OTTHUMG00000166085.1 2363 2266 2 ENSG00000240881.1 RP11-713P14.1 chr11 23520322 23521202 + processed_pseudogene KNOWN OTTHUMG00000158317.1 881 881 1 ENSG00000255193.1 RP11-945A11.1 chr11 23730588 23796970 + lincRNA NOVEL OTTHUMG00000166086.1 66383 683 4 ENSG00000254861.1 RP11-945A11.2 chr11 23761330 23804598 - lincRNA NOVEL OTTHUMG00000166087.1 43269 506 3 ENSG00000279850.1 AL135842.1 chr1 152511791 152512783 - protein_coding KNOWN NA 993 93 2 ENSG00000252519.1 RNU6-783P chr11 23849778 23849882 + snRNA KNOWN NA 105 105 1 ENSG00000277803.1 RP11-747E23.1 chr11 23886135 23893557 + processed_pseudogene KNOWN OTTHUMG00000187732.1 7423 596 2 ENSG00000254594.4 RP11-2F20.1 chr11 24235477 24262218 - lincRNA NOVEL OTTHUMG00000166108.1 26742 604 9 ENSG00000207252.1 Y_RNA chr11 24455911 24456010 + misc_RNA NOVEL NA 100 100 1 ENSG00000187398.10 LUZP2 chr11 24496970 25082631 + protein_coding KNOWN OTTHUMG00000166109.2 585662 8851 62 ENSG00000255489.1 CTC-830E23.1 chr11 24701275 24701575 + processed_pseudogene KNOWN OTTHUMG00000166116.1 301 301 1 ENSG00000255368.1 RP11-54J7.2 chr11 25140533 25141023 - processed_pseudogene KNOWN OTTHUMG00000166118.1 491 491 1 ENSG00000265837.1 AC015820.1 chr11 25537278 25537371 + miRNA NOVEL NA 94 94 1 ENSG00000240298.3 RPL36AP40 chr11 25588475 25588795 - processed_pseudogene KNOWN OTTHUMG00000158318.1 321 321 1 ENSG00000255454.1 RP11-46P12.1 chr11 25630720 25631041 + processed_pseudogene KNOWN OTTHUMG00000166088.1 322 322 1 ENSG00000169509.5 CRCT1 chr1 152514502 152516010 + protein_coding KNOWN OTTHUMG00000012391.1 1509 700 2 ENSG00000254456.4 RP11-405K6.1 chr11 25734770 25781758 + lincRNA NOVEL OTTHUMG00000166089.1 46989 984 15 ENSG00000254754.1 RP11-20J1.1 chr11 25924188 25926808 + lincRNA NOVEL OTTHUMG00000166090.1 2621 348 2 ENSG00000255086.1 RP11-336F14.1 chr11 26045987 26047598 + processed_pseudogene KNOWN OTTHUMG00000166094.1 1612 1552 2 ENSG00000255243.1 CTD-2507G9.1 chr11 26189123 26208347 + lincRNA NOVEL OTTHUMG00000166095.1 19225 510 2 ENSG00000254819.1 RP11-430L3.1 chr11 26285711 26288007 - lincRNA NOVEL OTTHUMG00000166110.1 2297 716 3 ENSG00000134343.11 ANO3 chr11 26309599 26663288 + protein_coding KNOWN OTTHUMG00000166096.5 353690 7700 88 ENSG00000255505.1 RP11-485O14.1 chr11 26427051 26427412 + processed_pseudogene KNOWN OTTHUMG00000166111.1 362 362 1 ENSG00000169550.11 MUC15 chr11 26559033 26572233 - protein_coding KNOWN OTTHUMG00000166112.1 13201 3356 20 ENSG00000148942.13 SLC5A12 chr11 26667019 26723427 - protein_coding KNOWN OTTHUMG00000150706.3 56409 7544 52 ENSG00000176971.3 FIBIN chr11 26994184 26996121 + protein_coding KNOWN OTTHUMG00000166120.1 1938 1938 1 ENSG00000185966.3 LCE3E chr1 152565654 152566772 - protein_coding KNOWN OTTHUMG00000012393.1 1119 611 2 ENSG00000129151.7 BBOX1 chr11 27040725 27127809 + protein_coding KNOWN OTTHUMG00000166121.2 87085 2464 44 ENSG00000254560.4 BBOX1-AS1 chr11 27047186 27220113 - antisense NOVEL OTTHUMG00000166122.1 172928 1312 16 ENSG00000109881.15 CCDC34 chr11 27330827 27363868 - protein_coding KNOWN OTTHUMG00000166211.2 33042 3733 15 ENSG00000205213.12 LGR4 chr11 27365961 27472775 - protein_coding KNOWN OTTHUMG00000133508.3 106815 6340 44 ENSG00000254862.4 RP11-159H22.2 chr11 27471729 27482433 + antisense NOVEL OTTHUMG00000166124.1 10705 1576 9 ENSG00000242527.1 RP11-159H22.1 chr11 27483850 27484128 + processed_pseudogene KNOWN OTTHUMG00000158332.1 279 279 1 ENSG00000148943.10 LIN7C chr11 27494576 27506773 - protein_coding KNOWN OTTHUMG00000166193.2 12198 4688 9 ENSG00000245573.6 BDNF-AS chr11 27506838 27698174 + antisense KNOWN OTTHUMG00000166125.5 191337 3726 53 ENSG00000278483.1 MIR8087 chr11 27514970 27515047 - miRNA KNOWN NA 78 78 1 ENSG00000212289.1 RNA5SP339 chr11 27521605 27521726 - rRNA KNOWN NA 122 122 1 ENSG00000231181.1 RP13-15M17.1 chr1 9576427 9576985 + processed_pseudogene KNOWN OTTHUMG00000001323.1 559 559 1 ENSG00000163202.4 LCE3D chr1 152579381 152580504 - protein_coding KNOWN OTTHUMG00000012384.1 1124 613 2 ENSG00000240036.4 RP11-587D21.1 chr11 27581680 27582055 + processed_pseudogene KNOWN OTTHUMG00000166149.1 376 376 1 ENSG00000254934.4 LINC00678 chr11 27617626 27634627 - lincRNA NOVEL OTTHUMG00000166194.1 17002 1165 7 ENSG00000176697.17 BDNF chr11 27654893 27722058 - protein_coding KNOWN OTTHUMG00000178797.2 67166 7740 43 ENSG00000255496.1 RP11-587D21.4 chr11 27696312 27877648 - sense_overlapping NOVEL OTTHUMG00000166166.1 181337 358 2 ENSG00000177447.6 CBX3P1 chr11 27806443 27806996 + processed_pseudogene KNOWN OTTHUMG00000150411.1 554 554 1 ENSG00000224411.3 HSP90AA2P chr11 27888838 27891033 - processed_pseudogene KNOWN OTTHUMG00000166183.1 2196 2196 1 ENSG00000255094.1 RP11-406D1.2 chr11 27978669 28019575 - lincRNA NOVEL OTTHUMG00000166206.1 40907 806 4 ENSG00000121621.6 KIF18A chr11 28020620 28108308 - protein_coding KNOWN OTTHUMG00000166195.3 87689 4668 31 ENSG00000207874.1 MIR610 chr11 28056815 28056910 + miRNA KNOWN NA 96 96 1 ENSG00000169519.18 METTL15 chr11 28108248 28333507 + protein_coding KNOWN OTTHUMG00000150448.2 225260 5499 42 ENSG00000187238.5 LCE3B chr1 152613811 152614098 + protein_coding KNOWN OTTHUMG00000012395.2 288 288 1 ENSG00000271332.1 RP11-797J4.1 chr11 28144907 28145204 - processed_pseudogene KNOWN OTTHUMG00000184831.1 298 298 1 ENSG00000222385.1 RN7SKP158 chr11 28261194 28261519 - misc_RNA KNOWN NA 326 326 1 ENSG00000238149.1 AC104978.1 chr11 28287235 28287625 - processed_pseudogene KNOWN OTTHUMG00000150447.1 391 391 1 ENSG00000255322.1 RP11-22P4.1 chr11 28352107 28527041 + lincRNA NOVEL OTTHUMG00000166207.1 174935 687 5 ENSG00000273912.1 MIR8068 chr11 28477481 28477548 - miRNA KNOWN NA 68 68 1 ENSG00000254606.1 RP11-22P4.2 chr11 28516832 28519341 + lincRNA NOVEL OTTHUMG00000166208.1 2510 747 2 ENSG00000248990.1 RP11-960D24.1 chr11 28679183 28683469 + lincRNA NOVEL OTTHUMG00000163392.1 4287 520 3 ENSG00000249867.4 RP11-115J23.1 chr11 28702615 29063821 + lincRNA NOVEL OTTHUMG00000163393.1 361207 1512 8 ENSG00000272882.1 OR2BH1P chr11 28986635 28987498 + unprocessed_pseudogene KNOWN OTTHUMG00000186077.1 864 864 1 ENSG00000254526.1 RP11-466I1.1 chr11 29159956 29266734 + lincRNA NOVEL OTTHUMG00000166127.1 106779 492 5 ENSG00000185962.1 LCE3A chr1 152622834 152623103 - protein_coding KNOWN OTTHUMG00000012397.2 270 270 1 ENSG00000255450.1 CTD-2063L20.1 chr11 29275655 29276565 + processed_pseudogene KNOWN OTTHUMG00000166128.1 911 911 1 ENSG00000211499.1 AC110056.1 chr11 29276689 29276805 + miRNA NOVEL NA 117 117 1 ENSG00000254530.1 RP11-460B17.3 chr11 29335878 29594295 - lincRNA NOVEL OTTHUMG00000166129.1 258418 568 6 ENSG00000255281.1 RP11-460B17.1 chr11 29391525 29393844 + processed_pseudogene KNOWN OTTHUMG00000166130.4 2320 1673 3 ENSG00000255227.1 RP11-460B17.2 chr11 29445487 29457393 + lincRNA NOVEL OTTHUMG00000166131.1 11907 563 6 ENSG00000255029.1 CTD-3012A18.1 chr11 29519076 29552639 + lincRNA NOVEL OTTHUMG00000166132.1 33564 563 2 ENSG00000255117.4 RP5-1027O15.1 chr11 29594918 29630664 + lincRNA NOVEL OTTHUMG00000166133.1 35747 896 6 ENSG00000255047.1 HNRNPRP2 chr11 29668886 29669628 - processed_pseudogene KNOWN OTTHUMG00000166153.1 743 743 1 ENSG00000254734.1 CTD-3138F19.1 chr11 29713909 29881714 + lincRNA NOVEL OTTHUMG00000166216.1 167806 576 3 ENSG00000243505.3 RN7SL240P chr11 29721399 29721684 - misc_RNA KNOWN NA 286 286 1 ENSG00000226947.1 RP1-52J10.9 chr1 152644393 152644717 - unprocessed_pseudogene KNOWN OTTHUMG00000012398.1 325 325 1 ENSG00000240554.1 RPL7AP58 chr11 29725764 29726565 + processed_pseudogene KNOWN OTTHUMG00000158337.1 802 802 1 ENSG00000261340.1 RP11-215H22.1 chr11 29980113 29982392 - lincRNA NOVEL OTTHUMG00000173210.1 2280 2280 1 ENSG00000182255.6 KCNA4 chr11 30009741 30017023 - protein_coding KNOWN OTTHUMG00000166144.2 7283 4195 4 ENSG00000254532.1 RP11-624D11.2 chr11 30044058 30084343 - lincRNA NOVEL OTTHUMG00000166145.1 40286 429 2 ENSG00000255288.1 RP4-562D20.2 chr11 30167163 30167306 + processed_pseudogene KNOWN OTTHUMG00000166158.1 144 144 1 ENSG00000131808.9 FSHB chr11 30231016 30235261 + protein_coding KNOWN OTTHUMG00000166146.3 4246 1944 8 ENSG00000152219.4 ARL14EP chr11 30323051 30338227 + protein_coding KNOWN OTTHUMG00000166154.2 15177 5465 10 ENSG00000242353.1 RP4-710M3.1 chr11 30368148 30368646 + processed_pseudogene KNOWN OTTHUMG00000158338.1 499 499 1 ENSG00000066382.15 MPPED2 chr11 30384493 30586872 - protein_coding KNOWN OTTHUMG00000166159.4 202380 8197 37 ENSG00000255480.1 RP4-710M3.2 chr11 30425552 30429268 + antisense NOVEL OTTHUMG00000166155.1 3717 365 2 ENSG00000176075.7 LINC00302 chr1 152655477 152656804 + lincRNA KNOWN OTTHUMG00000012386.2 1328 302 3 ENSG00000254489.1 RP5-1024C24.1 chr11 30584130 30630508 + antisense NOVEL OTTHUMG00000166160.1 46379 909 7 ENSG00000170959.13 DCDC1 chr11 30830369 31369810 - protein_coding KNOWN OTTHUMG00000150144.4 539442 13160 160 ENSG00000221629.1 AL162614.1 chr11 31205759 31205894 + miRNA NOVEL NA 136 136 1 ENSG00000255370.1 CYCSP25 chr11 31280672 31280987 - processed_pseudogene KNOWN OTTHUMG00000166209.1 316 316 1 ENSG00000255525.1 RP1-296L11.1 chr11 31305685 31314548 + antisense NOVEL OTTHUMG00000166210.1 8864 576 4 ENSG00000170946.13 DNAJC24 chr11 31369840 31431849 + protein_coding KNOWN OTTHUMG00000133712.3 62010 7592 42 ENSG00000148950.8 IMMP1L chr11 31432401 31509645 - protein_coding KNOWN OTTHUMG00000166226.1 77245 2854 63 ENSG00000221338.2 AC108456.1 chr11 31435470 31435562 - miRNA NOVEL NA 93 93 1 ENSG00000109911.16 ELP4 chr11 31509750 31783998 + protein_coding KNOWN OTTHUMG00000142919.2 274249 2219 42 ENSG00000281686.1 AC108456.2 chr11 31571991 31572124 - miRNA NOVEL NA 134 134 1 ENSG00000187223.3 LCE2D chr1 152663396 152664659 + protein_coding KNOWN OTTHUMG00000014400.1 1264 609 2 ENSG00000228061.4 Z83001.1 chr11 31637328 31767953 - antisense NOVEL OTTHUMG00000142920.1 130626 943 10 ENSG00000007372.19 PAX6 chr11 31784792 31817961 - protein_coding KNOWN OTTHUMG00000041447.11 33170 14782 241 ENSG00000049449.7 RCN1 chr11 31812391 32105755 + protein_coding KNOWN OTTHUMG00000166227.2 293365 7225 41 ENSG00000281880.1 PAUPAR chr11 31826347 31829311 + lincRNA KNOWN OTTHUMG00000189576.1 2965 2965 1 ENSG00000254584.1 RP1-17K7.2 chr11 32035981 32041318 - antisense NOVEL OTTHUMG00000166232.1 5338 1092 5 ENSG00000254836.1 RP1-17K7.3 chr11 32052843 32053260 - antisense NOVEL OTTHUMG00000166256.1 418 241 2 ENSG00000254627.1 RP1-17K7.1 chr11 32064912 32072173 + sense_intronic NOVEL OTTHUMG00000166233.1 7262 326 3 ENSG00000212551.2 U3 chr11 32081764 32081973 + snoRNA NOVEL NA 210 210 1 ENSG00000255490.1 EIF4A2P5 chr11 32085111 32085712 + processed_pseudogene KNOWN OTTHUMG00000166234.1 602 499 2 ENSG00000255252.3 RP1-65P5.3 chr11 32097143 32105091 - antisense NOVEL OTTHUMG00000166228.1 7949 150 2 ENSG00000187180.3 LCE2C chr1 152675295 152676574 + protein_coding KNOWN OTTHUMG00000012389.1 1280 614 2 ENSG00000227160.2 THEM7P chr11 32112049 32343409 - unitary_pseudogene KNOWN OTTHUMG00000154120.2 231361 1190 5 ENSG00000255375.1 RP1-65P5.5 chr11 32132699 32143579 + lincRNA NOVEL OTTHUMG00000166257.1 10881 646 3 ENSG00000184937.11 WT1 chr11 32387775 32435630 - protein_coding KNOWN OTTHUMG00000039556.4 47856 4113 74 ENSG00000183242.10 WT1-AS chr11 32435518 32458769 + antisense KNOWN OTTHUMG00000039557.3 23252 5561 18 ENSG00000278822.1 WT1-AS_1 chr11 32435738 32435846 + misc_RNA NOVEL NA 109 109 1 ENSG00000273677.1 WT1-AS_2 chr11 32436311 32436447 + misc_RNA NOVEL NA 137 137 1 ENSG00000278045.1 WT1-AS_3 chr11 32436797 32437030 + misc_RNA NOVEL NA 234 234 1 ENSG00000276530.1 WT1-AS_6 chr11 32439086 32439206 + misc_RNA NOVEL NA 121 121 1 ENSG00000273908.1 WT1-AS_7 chr11 32439716 32440009 + misc_RNA NOVEL NA 294 294 1 ENSG00000277119.1 WT1-AS_8 chr11 32440109 32440383 + misc_RNA NOVEL NA 275 275 1 ENSG00000159455.8 LCE2B chr1 152686123 152687401 + protein_coding KNOWN OTTHUMG00000012404.1 1279 612 2 ENSG00000274141.1 AC087653.1 chr11 32497587 32497666 - miRNA NOVEL NA 80 80 1 ENSG00000149100.11 EIF3M chr11 32583798 32606262 + protein_coding KNOWN OTTHUMG00000166258.3 22465 7428 81 ENSG00000270903.1 HNRNPA3P9 chr11 32591793 32592771 - processed_pseudogene KNOWN OTTHUMG00000184829.1 979 979 1 ENSG00000186714.11 CCDC73 chr11 32602246 32794658 - protein_coding KNOWN OTTHUMG00000166279.3 192413 7875 42 ENSG00000244535.1 RP1-181J22.1 chr11 32758268 32758614 + processed_pseudogene KNOWN OTTHUMG00000158339.1 347 347 1 ENSG00000135378.3 PRRG4 chr11 32829943 32858123 + protein_coding KNOWN OTTHUMG00000166219.2 28181 5530 6 ENSG00000060749.13 QSER1 chr11 32893178 32993316 + protein_coding KNOWN OTTHUMG00000166220.4 100139 10537 46 ENSG00000200615.1 Y_RNA chr11 33004250 33004345 - misc_RNA NOVEL NA 96 96 1 ENSG00000121690.8 DEPDC7 chr11 33015864 33033582 + protein_coding KNOWN OTTHUMG00000166242.1 17719 3326 33 ENSG00000176148.14 TCP11L1 chr11 33039417 33105943 + protein_coding KNOWN OTTHUMG00000165303.6 66527 5370 74 ENSG00000187173.3 LCE2A chr1 152698364 152699442 + protein_coding KNOWN OTTHUMG00000012392.1 1079 592 2 ENSG00000280550.1 AC131263.1 chr11 33073925 33074214 - protein_coding NOVEL NA 290 171 2 ENSG00000213713.3 PIGCP1 chr11 33075566 33076460 - processed_pseudogene KNOWN OTTHUMG00000166267.1 895 895 1 ENSG00000280798.1 LINC00294 chr11 33076149 33079454 + lincRNA KNOWN OTTHUMG00000189548.1 3306 3306 1 ENSG00000176102.10 CSTF3 chr11 33077188 33162371 - protein_coding KNOWN OTTHUMG00000166268.1 85184 4517 51 ENSG00000247151.5 CSTF3-AS1 chr11 33161657 33191598 + antisense NOVEL OTTHUMG00000166243.1 29942 2062 7 ENSG00000206808.1 Y_RNA chr11 33171381 33171490 - misc_RNA NOVEL NA 110 110 1 ENSG00000241950.1 RPL29P23 chr11 33190062 33190503 - processed_pseudogene KNOWN OTTHUMG00000158340.1 442 442 1 ENSG00000200485.1 Y_RNA chr11 33196547 33196637 - misc_RNA NOVEL NA 91 91 1 ENSG00000241255.1 RP1-89D4.1 chr11 33237008 33237409 + processed_pseudogene KNOWN OTTHUMG00000158342.1 402 402 1 ENSG00000110422.10 HIPK3 chr11 33256672 33357023 + protein_coding KNOWN OTTHUMG00000132269.2 100352 7958 71 ENSG00000187170.4 LCE4A chr1 152708160 152709491 + protein_coding KNOWN OTTHUMG00000014394.2 1332 680 3 ENSG00000223134.1 AL122015.1 chr11 33354465 33354545 + miRNA NOVEL NA 81 81 1 ENSG00000254537.1 RP1-130L23.1 chr11 33403216 33403605 + processed_pseudogene KNOWN OTTHUMG00000166277.1 390 390 1 ENSG00000255207.1 RP1-305G21.1 chr11 33450646 33450943 + processed_pseudogene KNOWN OTTHUMG00000166278.1 298 298 1 ENSG00000110427.13 KIAA1549L chr11 33542072 33674102 + protein_coding KNOWN OTTHUMG00000150410.5 132031 12318 45 ENSG00000255202.1 RP4-541C22.5 chr11 33665220 33696701 - antisense NOVEL OTTHUMG00000166269.1 31482 648 4 ENSG00000205177.6 C11orf91 chr11 33698261 33700801 - protein_coding KNOWN OTTHUMG00000166320.1 2541 891 5 ENSG00000085063.13 CD59 chr11 33698261 33736445 - protein_coding KNOWN OTTHUMG00000166270.3 38185 4942 57 ENSG00000110429.12 FBXO3 chr11 33740939 33774543 - protein_coding KNOWN OTTHUMG00000166244.3 33605 12446 103 ENSG00000254508.4 FBXO3-AS1 chr11 33774699 33775670 + antisense NOVEL OTTHUMG00000166272.1 972 386 6 ENSG00000255272.1 RP11-646J21.6 chr11 33776188 33779495 + antisense NOVEL OTTHUMG00000166273.1 3308 486 2 ENSG00000188807.11 TMEM201 chr1 9588922 9614873 + protein_coding KNOWN OTTHUMG00000057457.2 25952 6966 33 ENSG00000198854.5 C1orf68 chr1 152719522 152720470 + protein_coding KNOWN OTTHUMG00000012401.2 949 949 1 ENSG00000255161.1 RP11-646J21.7 chr11 33787054 33787795 - processed_pseudogene KNOWN OTTHUMG00000166274.1 742 742 1 ENSG00000255169.1 RP11-646J21.3 chr11 33804768 33805641 + lincRNA NOVEL OTTHUMG00000166245.1 874 547 3 ENSG00000254619.1 RP11-646J21.4 chr11 33810145 33811178 + lincRNA NOVEL OTTHUMG00000166246.1 1034 321 2 ENSG00000255133.1 RP11-646J21.2 chr11 33814877 33822095 - lincRNA NOVEL OTTHUMG00000166247.1 7219 308 3 ENSG00000135363.10 LMO2 chr11 33858576 33892289 - protein_coding KNOWN OTTHUMG00000157176.1 33714 3109 20 ENSG00000281628.1 AC113192.1 chr11 33860672 33860769 + miRNA NOVEL NA 98 98 1 ENSG00000184566.3 RP13-786C16.1 chr11 33880643 33881800 + antisense NOVEL OTTHUMG00000187450.1 1158 1158 2 ENSG00000135387.18 CAPRIN1 chr11 34051683 34101156 + protein_coding KNOWN OTTHUMG00000166248.3 49474 7689 162 ENSG00000135372.7 NAT10 chr11 34105602 34147670 + protein_coding KNOWN OTTHUMG00000166249.2 42069 5242 109 ENSG00000166016.5 ABTB2 chr11 34150988 34358008 - protein_coding KNOWN OTTHUMG00000044382.4 207021 4973 21 ENSG00000196734.7 LCE1B chr1 152737518 152813109 + protein_coding KNOWN OTTHUMG00000014402.1 75592 1183 3 ENSG00000201867.1 Y_RNA chr11 34189174 34189275 + misc_RNA NOVEL NA 102 102 1 ENSG00000254708.1 RP1-145M24.1 chr11 34335118 34336003 - processed_pseudogene KNOWN OTTHUMG00000166450.1 886 886 1 ENSG00000220204.1 RP1-53C18.3 chr11 34404663 34404949 - processed_pseudogene KNOWN OTTHUMG00000044384.1 287 287 1 ENSG00000216708.1 CIR1P3 chr11 34430880 34431649 + processed_pseudogene KNOWN OTTHUMG00000044383.1 770 479 2 ENSG00000121691.4 CAT chr11 34438925 34472062 + protein_coding KNOWN OTTHUMG00000044353.2 33138 3347 22 ENSG00000135374.8 ELF5 chr11 34478793 34513805 - protein_coding KNOWN OTTHUMG00000166451.1 35013 4494 32 ENSG00000264667.1 AL137224.1 chr11 34484436 34484538 - miRNA NOVEL NA 103 103 1 ENSG00000255271.1 RP4-594L9.2 chr11 34533014 34557924 - lincRNA NOVEL OTTHUMG00000166452.1 24911 389 3 ENSG00000255427.1 RP11-350D17.2 chr11 34570876 34573982 + lincRNA NOVEL OTTHUMG00000166453.1 3107 564 2 ENSG00000135373.11 EHF chr11 34621093 34661057 + protein_coding KNOWN OTTHUMG00000166454.1 39965 4386 73 ENSG00000229713.1 RP1-43O17.1 chr1 152737518 152737868 + unprocessed_pseudogene KNOWN OTTHUMG00000012399.1 351 351 1 ENSG00000271369.1 RP11-350D17.3 chr11 34709600 34710161 + processed_pseudogene KNOWN OTTHUMG00000184779.1 562 562 1 ENSG00000270491.1 RP4-743O11.1 chr11 34742906 34743199 + processed_pseudogene KNOWN OTTHUMG00000184768.1 294 294 1 ENSG00000149089.11 APIP chr11 34853094 34916499 - protein_coding KNOWN OTTHUMG00000166455.2 63406 5337 21 ENSG00000110435.10 PDHX chr11 34915829 35020591 + protein_coding KNOWN OTTHUMG00000166491.2 104763 3760 47 ENSG00000251862.2 MIR1343 chr11 34941837 34941920 + miRNA KNOWN NA 84 84 1 ENSG00000280915.1 AL138810.1 chr11 34945112 34945187 + miRNA NOVEL NA 76 76 1 ENSG00000255521.1 RP4-607I7.1 chr11 35132655 35138032 - antisense NOVEL OTTHUMG00000166326.1 5378 1214 5 ENSG00000026508.15 CD44 chr11 35138870 35232402 + protein_coding KNOWN OTTHUMG00000044388.7 93533 10057 226 ENSG00000255443.1 RP1-68D18.4 chr11 35210343 35214985 - antisense NOVEL OTTHUMG00000166327.1 4643 587 2 ENSG00000251194.2 RP1-68D18.2 chr11 35212550 35214007 + sense_intronic NOVEL OTTHUMG00000166288.1 1458 704 2 ENSG00000233819.1 RP1-43O17.2 chr1 152744299 152744606 + unprocessed_pseudogene KNOWN OTTHUMG00000012400.1 308 308 1 ENSG00000110436.10 SLC1A2 chr11 35251206 35420063 - protein_coding KNOWN OTTHUMG00000044391.4 168858 12331 61 ENSG00000255004.1 RP1-68D18.3 chr11 35281813 35286009 + antisense NOVEL OTTHUMG00000166308.1 4197 776 2 ENSG00000215380.2 AC090625.1 chr11 35374265 35374474 + processed_pseudogene KNOWN OTTHUMG00000133753.1 210 210 1 ENSG00000255542.1 RP4-683L5.1 chr11 35419057 35421002 + antisense NOVEL OTTHUMG00000166309.1 1946 518 2 ENSG00000149090.10 PAMR1 chr11 35431823 35530300 - protein_coding KNOWN OTTHUMG00000166328.3 98478 3863 84 ENSG00000254669.1 RP5-945I17.2 chr11 35579430 35585310 - lincRNA NOVEL OTTHUMG00000166329.1 5881 537 4 ENSG00000179431.6 FJX1 chr11 35618419 35620868 + protein_coding KNOWN OTTHUMG00000166310.1 2450 2450 3 ENSG00000254686.2 RP1-276E15.1 chr11 35656694 35661339 + lincRNA NOVEL OTTHUMG00000166311.2 4646 471 3 ENSG00000166326.6 TRIM44 chr11 35662805 35818007 + protein_coding KNOWN OTTHUMG00000166312.2 155203 13077 9 ENSG00000186082.9 KRT18P14 chr11 35860249 35861498 - processed_pseudogene KNOWN OTTHUMG00000166330.1 1250 1250 1 ENSG00000203786.6 KPRP chr1 152759561 152762052 + protein_coding KNOWN OTTHUMG00000012402.2 2492 2492 1 ENSG00000266590.1 AC090692.1 chr11 35860654 35860744 - miRNA NOVEL NA 91 91 1 ENSG00000254919.1 RP11-698N11.2 chr11 35915051 35918739 - antisense NOVEL OTTHUMG00000166331.2 3689 906 5 ENSG00000179241.11 LDLRAD3 chr11 35943981 36232136 + protein_coding KNOWN OTTHUMG00000166313.1 288156 4575 27 ENSG00000254672.1 RP5-916O11.3 chr11 35967010 35968676 - processed_pseudogene KNOWN OTTHUMG00000166449.1 1667 1667 1 ENSG00000255256.1 RP5-916O11.2 chr11 35972428 35989007 + sense_intronic NOVEL OTTHUMG00000166314.1 16580 494 2 ENSG00000241228.1 RP5-916O11.1 chr11 35997226 35997675 - processed_pseudogene KNOWN OTTHUMG00000158347.1 450 450 1 ENSG00000263389.1 MIR3973 chr11 36010098 36010204 + miRNA KNOWN NA 107 107 1 ENSG00000280321.1 RP11-1110F20.1 chr11 36196248 36197901 + TEC KNOWN OTTHUMG00000166315.1 1654 1654 1 ENSG00000110442.10 COMMD9 chr11 36269284 36289449 - protein_coding KNOWN OTTHUMG00000166333.2 20166 6592 30 ENSG00000135362.12 PRR5L chr11 36296288 36465204 + protein_coding KNOWN OTTHUMG00000166334.2 168917 6616 83 ENSG00000240386.3 LCE1F chr1 152776372 152776728 + protein_coding KNOWN OTTHUMG00000012403.2 357 357 1 ENSG00000254566.1 RP11-514F3.4 chr11 36321158 36323440 - lincRNA NOVEL OTTHUMG00000166335.1 2283 535 2 ENSG00000255186.1 RP11-514F3.5 chr11 36386521 36388250 + sense_intronic NOVEL OTTHUMG00000166389.1 1730 151 2 ENSG00000255060.1 RP11-219O3.2 chr11 36425447 36426122 - antisense NOVEL OTTHUMG00000166390.1 676 478 2 ENSG00000175104.13 TRAF6 chr11 36487027 36510272 - protein_coding KNOWN OTTHUMG00000166391.1 23246 4871 19 ENSG00000280331.1 RP11-545D22.1 chr11 36510361 36510537 + TEC KNOWN OTTHUMG00000173198.1 177 177 1 ENSG00000166349.8 RAG1 chr11 36510709 36593156 + protein_coding KNOWN OTTHUMG00000166392.2 82448 7815 15 ENSG00000175097.6 RAG2 chr11 36575574 36598279 - protein_coding KNOWN OTTHUMG00000166393.2 22706 3502 21 ENSG00000166352.14 C11orf74 chr11 36594493 36659290 + protein_coding KNOWN OTTHUMG00000166397.2 64798 1474 53 ENSG00000254498.1 CTD-2119L1.1 chr11 36696317 36697867 + processed_pseudogene KNOWN OTTHUMG00000166332.1 1551 883 2 ENSG00000275364.1 AC087174.1 chr11 37278322 37278417 + miRNA NOVEL NA 96 96 1 ENSG00000186226.8 LCE1E chr1 152786214 152788426 + protein_coding KNOWN OTTHUMG00000012405.2 2213 1299 6 ENSG00000251838.1 SNORA31 chr11 37702125 37702220 - snoRNA NOVEL NA 96 96 1 ENSG00000242834.1 RPL7AP56 chr11 37725666 37726456 + processed_pseudogene KNOWN OTTHUMG00000158348.1 791 791 1 ENSG00000254516.1 RP11-159D8.1 chr11 37938601 37954663 + lincRNA NOVEL OTTHUMG00000166370.1 16063 376 3 ENSG00000279004.1 RP11-159D8.2 chr11 38013510 38014141 - TEC KNOWN OTTHUMG00000173212.1 632 632 1 ENSG00000254784.1 LRRC6P1 chr11 38211389 38212799 + processed_pseudogene KNOWN OTTHUMG00000166456.1 1411 885 2 ENSG00000255477.1 RP11-63D14.1 chr11 38498995 38500186 + lincRNA NOVEL OTTHUMG00000166457.1 1192 510 2 ENSG00000255175.4 RP11-277K23.1 chr11 38618264 38646356 - lincRNA NOVEL OTTHUMG00000166466.1 28093 526 10 ENSG00000254562.4 LINC01493 chr11 38646476 38674241 + lincRNA NOVEL OTTHUMG00000166467.1 27766 1428 10 ENSG00000240975.1 RP11-313M3.1 chr11 39161453 39161967 + processed_pseudogene KNOWN OTTHUMG00000158349.1 515 515 1 ENSG00000201591.1 RNU6-99P chr11 39261107 39261213 + snRNA KNOWN NA 107 107 1 ENSG00000172155.9 LCE1D chr1 152796751 152798181 + protein_coding KNOWN OTTHUMG00000012444.2 1431 430 2 ENSG00000281643.1 AC027806.1 chr11 39730812 39730908 - miRNA NOVEL NA 97 97 1 ENSG00000221804.1 AC021749.1 chr11 39861506 39861594 - miRNA NOVEL NA 89 89 1 ENSG00000270588.1 RP11-810F22.1 chr11 39873782 39874388 + processed_pseudogene KNOWN OTTHUMG00000184766.1 607 607 1 ENSG00000255347.1 RP11-40H19.1 chr11 40083710 40084517 - processed_pseudogene KNOWN OTTHUMG00000166382.1 808 808 1 ENSG00000279675.1 RP11-454H19.2 chr11 40107244 40112599 - TEC KNOWN OTTHUMG00000173211.1 5356 5356 1 ENSG00000148948.6 LRRC4C chr11 40114203 41459773 - protein_coding KNOWN OTTHUMG00000166383.2 1345571 5356 27 ENSG00000206806.1 Y_RNA chr11 40351564 40351672 + misc_RNA NOVEL NA 109 109 1 ENSG00000254579.1 RP11-407P18.1 chr11 40445304 40447141 - processed_pseudogene KNOWN OTTHUMG00000166374.1 1838 1838 1 ENSG00000221357.1 AC104387.1 chr11 40759522 40759605 + miRNA NOVEL NA 84 84 1 ENSG00000252922.1 RNU6-365P chr11 41122907 41123012 - snRNA KNOWN NA 106 106 1 ENSG00000197084.5 LCE1C chr1 152804835 152806628 - protein_coding KNOWN OTTHUMG00000012445.2 1794 692 4 ENSG00000255132.1 RP11-63C8.1 chr11 41394595 41426504 + lincRNA NOVEL OTTHUMG00000166372.1 31910 578 3 ENSG00000255388.4 RP11-124G5.3 chr11 41518895 41714448 - lincRNA NOVEL OTTHUMG00000166488.1 195554 1026 10 ENSG00000242729.1 RP11-124G5.1 chr11 41538434 41538986 + processed_pseudogene KNOWN OTTHUMG00000158368.2 553 553 1 ENSG00000255563.1 RP11-124G5.2 chr11 41660030 41660221 + processed_pseudogene KNOWN OTTHUMG00000166375.1 192 192 1 ENSG00000255171.4 LINC01499 chr11 41714568 41836442 + lincRNA NOVEL OTTHUMG00000166376.1 121875 1310 14 ENSG00000254668.1 RP11-375D13.1 chr11 41797543 41797964 + processed_pseudogene KNOWN OTTHUMG00000166377.1 422 422 1 ENSG00000255279.1 RP11-375D13.4 chr11 41855920 41875997 + lincRNA NOVEL OTTHUMG00000166378.1 20078 1160 8 ENSG00000254822.1 RP11-375D13.3 chr11 41876634 41877078 + lincRNA NOVEL OTTHUMG00000166379.1 445 270 2 ENSG00000255300.4 RP11-148I19.1 chr11 41993385 42163851 - lincRNA NOVEL OTTHUMG00000166487.1 170467 977 9 ENSG00000274470.1 AC079917.1 chr11 42121101 42121168 - miRNA NOVEL NA 68 68 1 ENSG00000186844.5 LCE1A chr1 152827473 152827894 + protein_coding KNOWN OTTHUMG00000012447.2 422 422 1 ENSG00000255109.4 CTD-2572N17.1 chr11 42183292 42253712 - lincRNA NOVEL OTTHUMG00000166380.1 70421 1091 14 ENSG00000254914.1 CTD-2537L20.1 chr11 42939775 42939998 + processed_pseudogene KNOWN OTTHUMG00000166547.1 224 224 1 ENSG00000271028.1 RP11-111A24.2 chr11 43063637 43065932 - processed_pseudogene KNOWN OTTHUMG00000184826.1 2296 1448 2 ENSG00000254725.1 RP11-111A24.1 chr11 43065686 43066076 - processed_pseudogene KNOWN OTTHUMG00000166548.1 391 391 1 ENSG00000251557.2 HNRNPKP3 chr11 43120762 43269393 - transcribed_processed_pseudogene KNOWN OTTHUMG00000166550.1 148632 2513 6 ENSG00000166181.11 API5 chr11 43311963 43344529 + protein_coding KNOWN OTTHUMG00000166395.5 32567 4651 92 ENSG00000254907.1 RP11-484D2.2 chr11 43328748 43359296 - antisense NOVEL OTTHUMG00000166396.1 30549 787 4 ENSG00000252652.1 Y_RNA chr11 43331261 43331356 + misc_RNA NOVEL NA 96 96 1 ENSG00000052841.13 TTC17 chr11 43358932 43494933 + protein_coding KNOWN OTTHUMG00000166398.4 136002 11284 101 ENSG00000255340.1 RP11-484D2.5 chr11 43378882 43385671 - antisense NOVEL OTTHUMG00000166551.1 6790 444 2 ENSG00000171608.14 PIK3CD chr1 9651732 9729114 + protein_coding KNOWN OTTHUMG00000001450.2 77383 6332 128 ENSG00000235942.2 LCE6A chr1 152842868 152843983 + protein_coding KNOWN OTTHUMG00000012448.2 1116 628 2 ENSG00000254577.1 RP11-484D2.4 chr11 43390283 43395495 + sense_overlapping NOVEL OTTHUMG00000166399.1 5213 183 2 ENSG00000252355.1 RN7SKP287 chr11 43435132 43435397 - misc_RNA KNOWN NA 266 266 1 ENSG00000254463.1 RP11-484D2.3 chr11 43466392 43466871 + processed_pseudogene KNOWN OTTHUMG00000166400.1 480 480 1 ENSG00000213697.3 CTBP2P6 chr11 43522036 43523264 + processed_pseudogene KNOWN OTTHUMG00000166401.1 1229 1229 1 ENSG00000149084.10 HSD17B12 chr11 43556436 43856617 + protein_coding KNOWN OTTHUMG00000166403.2 300182 8600 82 ENSG00000235661.2 MIR670HG chr11 43556758 43570395 + unitary_pseudogene KNOWN OTTHUMG00000154881.2 13638 1108 4 ENSG00000211568.1 MIR670 chr11 43559656 43559753 + miRNA KNOWN NA 98 98 1 ENSG00000199077.2 MIR129-2 chr11 43581380 43581487 + miRNA KNOWN NA 108 108 1 ENSG00000243721.1 RP11-472I20.1 chr11 43718676 43719146 + processed_pseudogene KNOWN OTTHUMG00000158373.1 471 471 1 ENSG00000254512.1 RP11-472I20.2 chr11 43733759 43734564 + processed_pseudogene KNOWN OTTHUMG00000166404.1 806 806 1 ENSG00000163206.5 SMCP chr1 152878317 152885047 + protein_coding KNOWN OTTHUMG00000012452.1 6731 775 2 ENSG00000246250.2 RP11-613D13.5 chr11 43829709 43880726 - antisense NOVEL OTTHUMG00000166552.1 51018 3296 10 ENSG00000166199.11 ALKBH3 chr11 43880811 43920266 + protein_coding KNOWN OTTHUMG00000166417.2 39456 2372 73 ENSG00000213693.4 SEC14L1P1 chr11 43897456 43899636 + processed_pseudogene KNOWN OTTHUMG00000166418.1 2181 2181 1 ENSG00000244926.5 ALKBH3-AS1 chr11 43909292 43920944 - antisense NOVEL OTTHUMG00000166553.1 11653 2334 16 ENSG00000254409.1 RP11-613D13.4 chr11 43921059 44001157 + sense_overlapping NOVEL OTTHUMG00000166493.1 80099 1143 11 ENSG00000187479.5 C11orf96 chr11 43925342 43944338 + protein_coding KNOWN OTTHUMG00000166555.5 18997 2373 6 ENSG00000244953.1 RP11-613D13.8 chr11 43943787 43947206 - lincRNA NOVEL OTTHUMG00000166556.1 3420 2045 2 ENSG00000205126.2 ACCSL chr11 44047981 44059977 + protein_coding KNOWN OTTHUMG00000166426.2 11997 1867 28 ENSG00000110455.12 ACCS chr11 44065925 44084222 + protein_coding KNOWN OTTHUMG00000166427.3 18298 5826 72 ENSG00000255165.1 CTD-2609K8.3 chr11 44071462 44072403 + sense_intronic NOVEL OTTHUMG00000166430.1 942 464 2 ENSG00000163207.6 IVL chr1 152908545 152911886 + protein_coding KNOWN OTTHUMG00000012451.1 3342 2153 2 ENSG00000151348.12 EXT2 chr11 44095549 44245429 + protein_coding KNOWN OTTHUMG00000166498.1 149881 5286 84 ENSG00000052850.5 ALX4 chr11 44260444 44310166 - protein_coding KNOWN OTTHUMG00000166557.1 49723 5750 4 ENSG00000255451.1 RP11-58K22.1 chr11 44468464 44470429 + lincRNA NOVEL OTTHUMG00000166470.1 1966 520 3 ENSG00000255106.1 RP11-58K22.2 chr11 44539778 44540693 - processed_pseudogene KNOWN OTTHUMG00000166471.1 916 792 2 ENSG00000085117.10 CD82 chr11 44564427 44620363 + protein_coding KNOWN OTTHUMG00000166472.1 55937 4054 87 ENSG00000254693.1 RP11-58K22.5 chr11 44604508 44605337 - antisense NOVEL OTTHUMG00000166473.1 830 543 2 ENSG00000255092.1 RP11-58K22.4 chr11 44606170 44608101 - antisense NOVEL OTTHUMG00000166474.1 1932 567 4 ENSG00000244267.1 RPL34P22 chr11 44629357 44629674 + processed_pseudogene KNOWN OTTHUMG00000158375.2 318 318 1 ENSG00000275725.1 RP11-244C20.2 chr11 44656771 44656920 + processed_pseudogene KNOWN OTTHUMG00000187733.1 150 150 1 ENSG00000255079.1 RP11-45A12.1 chr11 44694863 44696301 - lincRNA NOVEL OTTHUMG00000166475.1 1439 789 2 ENSG00000224308.1 LINC01527 chr1 152930040 152949210 - antisense NOVEL OTTHUMG00000012449.1 19171 1997 2 ENSG00000255032.1 RP11-45A12.2 chr11 44719392 44736692 - lincRNA NOVEL OTTHUMG00000166476.1 17301 628 3 ENSG00000157570.10 TSPAN18 chr11 44726465 44932421 + protein_coding KNOWN OTTHUMG00000163883.3 205957 5871 76 ENSG00000175274.17 TP53I11 chr11 44885903 44951306 - protein_coding KNOWN OTTHUMG00000165714.3 65404 7345 134 ENSG00000254654.1 AC068858.1 chr11 44973902 44978028 + lincRNA NOVEL OTTHUMG00000166477.1 4127 1239 4 ENSG00000019485.11 PRDM11 chr11 45095806 45235124 + protein_coding KNOWN OTTHUMG00000166478.4 139319 13954 37 ENSG00000254664.1 CTD-2560E9.3 chr11 45215815 45235292 - antisense NOVEL OTTHUMG00000166503.1 19478 567 2 ENSG00000019505.6 SYT13 chr11 45240301 45286319 - protein_coding KNOWN OTTHUMG00000166504.1 46019 5424 18 ENSG00000254497.1 CTD-2560E9.5 chr11 45253884 45254649 + antisense NOVEL OTTHUMG00000166505.1 766 570 5 ENSG00000254427.1 RP11-430H10.1 chr11 45355371 45366121 + lincRNA NOVEL OTTHUMG00000166506.1 10751 1380 6 ENSG00000255267.3 RP11-430H10.2 chr11 45371397 45388508 + lincRNA NOVEL OTTHUMG00000166507.1 17112 2597 5 ENSG00000184148.3 SPRR4 chr1 152970666 152972574 + protein_coding KNOWN OTTHUMG00000012450.1 1909 733 2 ENSG00000255041.1 RP11-430H10.4 chr11 45387215 45513802 - lincRNA NOVEL OTTHUMG00000166508.1 126588 606 3 ENSG00000254651.1 RP11-430H10.3 chr11 45399448 45400528 + lincRNA NOVEL OTTHUMG00000166509.1 1081 561 2 ENSG00000254746.4 RP11-958J22.1 chr11 45489689 45542474 - processed_transcript NOVEL OTTHUMG00000166510.1 52786 1121 19 ENSG00000255519.1 RP11-958J22.2 chr11 45514187 45514451 + processed_pseudogene KNOWN OTTHUMG00000166511.1 265 265 1 ENSG00000254514.1 RP11-958J22.3 chr11 45582525 45583474 + lincRNA NOVEL OTTHUMG00000166512.1 950 564 2 ENSG00000175264.6 CHST1 chr11 45648877 45665622 - protein_coding KNOWN OTTHUMG00000166513.1 16746 3478 9 ENSG00000255091.1 RP11-495O11.1 chr11 45651529 45652691 + antisense NOVEL OTTHUMG00000166514.1 1163 249 2 ENSG00000276639.1 MIR7154 chr11 45691704 45691776 - miRNA KNOWN NA 73 73 1 ENSG00000254519.2 CTD-2210P24.1 chr11 45722308 45744250 + lincRNA NOVEL OTTHUMG00000166515.2 21943 1418 10 ENSG00000255426.1 CTD-2210P24.2 chr11 45733994 45735766 - lincRNA NOVEL OTTHUMG00000166516.1 1773 860 2 ENSG00000169474.4 SPRR1A chr1 152985231 152985500 + protein_coding KNOWN OTTHUMG00000014404.1 270 270 1 ENSG00000255226.1 CTD-2210P24.3 chr11 45750823 45751871 - antisense NOVEL OTTHUMG00000166517.1 1049 597 4 ENSG00000205106.4 DKFZp779M0652 chr11 45771432 45772358 + lincRNA NOVEL OTTHUMG00000166518.1 927 649 2 ENSG00000181830.8 SLC35C1 chr11 45804072 45813015 + protein_coding KNOWN OTTHUMG00000166519.2 8944 4505 9 ENSG00000255447.1 CTD-2210P24.6 chr11 45813219 45825258 + lincRNA NOVEL OTTHUMG00000167002.1 12040 469 3 ENSG00000121671.10 CRY2 chr11 45847118 45883248 + protein_coding KNOWN OTTHUMG00000153225.4 36131 6200 72 ENSG00000121653.10 MAPK8IP1 chr11 45885651 45906465 + protein_coding KNOWN OTTHUMG00000134324.2 20815 3498 26 ENSG00000255498.1 RP11-618K13.2 chr11 45905941 45906461 - antisense NOVEL OTTHUMG00000167003.1 521 409 2 ENSG00000234776.3 C11orf94 chr11 45906534 45907282 - protein_coding KNOWN OTTHUMG00000167004.2 749 369 3 ENSG00000121680.14 PEX16 chr11 45909669 45918812 - protein_coding KNOWN OTTHUMG00000167005.1 9144 3013 75 ENSG00000165905.15 GYLTL1B chr11 45921621 45929096 + protein_coding KNOWN OTTHUMG00000167037.1 7476 3115 95 ENSG00000163209.13 SPRR3 chr1 153001747 153003856 + protein_coding KNOWN OTTHUMG00000013872.1 2110 1441 10 ENSG00000135365.14 PHF21A chr11 45929323 46121178 - protein_coding KNOWN OTTHUMG00000167038.2 191856 11190 139 ENSG00000263539.1 AC024475.1 chr11 46113122 46113218 - miRNA NOVEL NA 97 97 1 ENSG00000254653.1 RP11-702F3.1 chr11 46116578 46117318 + lincRNA NOVEL OTTHUMG00000167041.1 741 605 2 ENSG00000254871.1 RP11-702F3.2 chr11 46142716 46143594 + processed_pseudogene KNOWN OTTHUMG00000167042.1 879 879 1 ENSG00000255314.1 RP11-702F3.3 chr11 46171947 46177105 + lincRNA NOVEL OTTHUMG00000167043.1 5159 941 3 ENSG00000255269.1 RP11-702F3.4 chr11 46213821 46215858 - lincRNA NOVEL OTTHUMG00000167044.1 2038 536 2 ENSG00000254639.1 CTD-2589M5.5 chr11 46238382 46239267 + lincRNA NOVEL OTTHUMG00000166909.1 886 653 2 ENSG00000281554.1 Y_RNA chr11 46244159 46244273 + misc_RNA NOVEL NA 115 115 1 ENSG00000255007.1 CTD-2589M5.4 chr11 46256355 46274547 - antisense NOVEL OTTHUMG00000166910.1 18193 354 2 ENSG00000157613.9 CREB3L1 chr11 46277661 46321422 + protein_coding KNOWN OTTHUMG00000166423.6 43762 4037 30 ENSG00000252920.1 SNORA31 chr1 153012482 153012614 - snoRNA NOVEL NA 133 133 1 ENSG00000149091.14 DGKZ chr11 46332905 46380554 + protein_coding KNOWN OTTHUMG00000166437.7 47650 10787 381 ENSG00000264102.1 MIR4688 chr11 46376402 46376484 + miRNA KNOWN NA 83 83 1 ENSG00000110492.14 MDK chr11 46380756 46383837 + protein_coding KNOWN OTTHUMG00000150315.5 3082 2196 55 ENSG00000180720.7 CHRM4 chr11 46385098 46386608 - protein_coding KNOWN OTTHUMG00000154371.1 1511 1511 1 ENSG00000110497.13 AMBRA1 chr11 46396414 46594125 - protein_coding KNOWN OTTHUMG00000166500.3 197712 7673 112 ENSG00000244313.3 RP11-425L10.1 chr11 46428653 46429150 - processed_pseudogene KNOWN OTTHUMG00000158376.1 498 498 1 ENSG00000265014.1 MIR3160-1 chr11 46451805 46451889 - miRNA KNOWN NA 85 85 1 ENSG00000180423.4 HARBI1 chr11 46602861 46617909 - protein_coding KNOWN OTTHUMG00000166537.1 15049 2662 7 ENSG00000175224.15 ATG13 chr11 46617527 46674818 + protein_coding KNOWN OTTHUMG00000166538.3 57292 7001 220 ENSG00000175220.10 ARHGAP1 chr11 46677080 46700615 - protein_coding KNOWN OTTHUMG00000166567.1 23536 6138 50 ENSG00000234262.1 RP1-20N18.4 chr1 153023962 153024260 + unprocessed_pseudogene KNOWN OTTHUMG00000013866.1 299 299 1 ENSG00000175213.2 ZNF408 chr11 46700818 46705912 + protein_coding KNOWN OTTHUMG00000166568.2 5095 3078 14 ENSG00000180210.13 F2 chr11 46719180 46739506 + protein_coding KNOWN OTTHUMG00000150344.3 20327 2550 40 ENSG00000175216.13 CKAP5 chr11 46743048 46846308 - protein_coding KNOWN OTTHUMG00000166599.3 103261 8538 183 ENSG00000263540.1 MIR5582 chr11 46753125 46753192 - miRNA KNOWN NA 68 68 1 ENSG00000252427.1 SNORD67 chr11 46758766 46758873 - snoRNA NOVEL NA 108 108 1 ENSG00000212135.1 SNORD67 chr11 46762389 46762499 - snoRNA KNOWN NA 111 111 1 ENSG00000247675.5 LRP4-AS1 chr11 46846412 46874396 + antisense NOVEL OTTHUMG00000166699.1 27985 1614 7 ENSG00000134569.8 LRP4 chr11 46856868 46918642 - protein_coding KNOWN OTTHUMG00000166700.2 61775 8597 51 ENSG00000149179.12 C11orf49 chr11 46936689 47164385 + protein_coding KNOWN OTTHUMG00000166725.3 227697 6693 133 ENSG00000271350.1 CTD-2384B9.1 chr11 47041027 47041945 - processed_pseudogene KNOWN OTTHUMG00000184824.1 919 919 1 ENSG00000169469.8 SPRR1B chr1 153031202 153032900 + protein_coding KNOWN OTTHUMG00000013869.1 1699 620 2 ENSG00000255520.1 RP11-390K5.3 chr11 47123104 47130801 - antisense NOVEL OTTHUMG00000166772.1 7698 332 2 ENSG00000149182.13 ARFGAP2 chr11 47164299 47177125 - protein_coding KNOWN OTTHUMG00000166773.4 12827 5918 214 ENSG00000270060.1 RP11-390K5.6 chr11 47168281 47169563 - sense_intronic NOVEL OTTHUMG00000183948.1 1283 574 2 ENSG00000165912.14 PACSIN3 chr11 47177525 47186443 - protein_coding KNOWN OTTHUMG00000166870.3 8919 2752 78 ENSG00000275208.1 MIR6745 chr11 47179611 47179737 - miRNA KNOWN NA 127 127 1 ENSG00000243802.2 RP11-390K5.1 chr11 47191181 47191542 - processed_pseudogene KNOWN OTTHUMG00000158381.2 362 362 1 ENSG00000134574.10 DDB2 chr11 47214465 47239240 + protein_coding KNOWN OTTHUMG00000187453.5 24776 4897 96 ENSG00000256897.1 RP11-17G12.2 chr11 47220218 47221751 - antisense NOVEL OTTHUMG00000167883.1 1534 610 2 ENSG00000134575.8 ACP2 chr11 47239302 47248906 - protein_coding KNOWN OTTHUMG00000166949.5 9605 3484 101 ENSG00000025434.17 NR1H3 chr11 47248300 47269032 + protein_coding KNOWN OTTHUMG00000150628.9 20733 4533 191 ENSG00000179840.5 PIK3CD-AS1 chr1 9652610 9654586 - antisense KNOWN OTTHUMG00000001452.1 1977 1823 2 ENSG00000163216.6 SPRR2D chr1 153039725 153041931 - protein_coding KNOWN OTTHUMG00000014396.1 2207 1057 9 ENSG00000110514.17 MADD chr11 47269161 47330031 + protein_coding KNOWN OTTHUMG00000150350.5 60871 8353 356 ENSG00000256746.4 RP11-17G12.3 chr11 47270657 47272110 - antisense NOVEL OTTHUMG00000167884.1 1454 536 6 ENSG00000134571.9 MYBPC3 chr11 47331397 47352702 - protein_coding KNOWN OTTHUMG00000166986.6 21306 4280 129 ENSG00000066336.10 SPI1 chr11 47354860 47378576 - protein_coding KNOWN OTTHUMG00000150150.4 23717 2069 16 ENSG00000255197.4 RP11-750H9.5 chr11 47383148 47409190 - antisense NOVEL OTTHUMG00000167691.1 26043 1113 9 ENSG00000264583.1 MIR4487 chr11 47400970 47401042 + miRNA KNOWN NA 73 73 1 ENSG00000165915.12 SLC39A13 chr11 47407132 47416501 + protein_coding KNOWN OTTHUMG00000166890.3 9370 4584 70 ENSG00000165916.7 PSMC3 chr11 47418769 47426473 - protein_coding KNOWN OTTHUMG00000167692.3 7705 2276 104 ENSG00000165917.8 RAPSN chr11 47437757 47449178 - protein_coding KNOWN OTTHUMG00000166891.2 11422 1918 28 ENSG00000149187.16 CELF1 chr11 47465944 47565569 - protein_coding KNOWN OTTHUMG00000166526.4 99626 10441 153 ENSG00000241794.1 SPRR2A chr1 153056113 153057537 - protein_coding KNOWN OTTHUMG00000014395.1 1425 709 2 ENSG00000265467.1 AC090559.1 chr11 47485822 47485913 - miRNA NOVEL NA 92 92 1 ENSG00000270072.1 RP11-750H9.7 chr11 47513605 47514889 - sense_intronic NOVEL OTTHUMG00000183949.1 1285 430 2 ENSG00000265559.2 RN7SL652P chr11 47557534 47557833 - misc_RNA KNOWN NA 300 300 1 ENSG00000213619.8 NDUFS3 chr11 47565336 47584562 + protein_coding KNOWN OTTHUMG00000166893.3 19227 3670 49 ENSG00000110536.12 PTPMT1 chr11 47565430 47573461 + protein_coding KNOWN OTTHUMG00000166892.3 8032 2740 15 ENSG00000123444.12 KBTBD4 chr11 47572197 47579015 - protein_coding KNOWN OTTHUMG00000166894.2 6819 3302 29 ENSG00000200376.1 RNU5E-10P chr11 47576471 47576588 - snRNA KNOWN NA 118 118 1 ENSG00000231880.2 RP11-76I23.7 chr11 47577725 47578277 + antisense NOVEL OTTHUMG00000187459.2 553 553 1 ENSG00000196666.4 FAM180B chr11 47586693 47589194 + protein_coding KNOWN OTTHUMG00000167871.1 2502 1388 3 ENSG00000172247.3 C1QTNF4 chr11 47589664 47594659 - protein_coding KNOWN OTTHUMG00000166895.1 4996 1664 4 ENSG00000196805.7 SPRR2B chr1 153070224 153070840 - protein_coding KNOWN OTTHUMG00000013863.3 617 617 1 ENSG00000280615.1 Y_RNA chr11 47614898 47614994 - misc_RNA NOVEL NA 97 97 1 ENSG00000109919.8 MTCH2 chr11 47617315 47642623 - protein_coding KNOWN OTTHUMG00000166926.3 25309 2897 50 ENSG00000165923.14 AGBL2 chr11 47659591 47715389 - protein_coding KNOWN OTTHUMG00000165368.6 55799 5483 113 ENSG00000109920.11 FNBP4 chr11 47716517 47767443 - protein_coding KNOWN OTTHUMG00000166533.7 50927 7596 71 ENSG00000200090.1 Y_RNA chr11 47726894 47726992 - misc_RNA NOVEL NA 99 99 1 ENSG00000030066.12 NUP160 chr11 47778087 47848555 - protein_coding KNOWN OTTHUMG00000166534.4 70469 8576 132 ENSG00000271543.1 RP11-692M12.5 chr11 47796169 47796379 + processed_pseudogene KNOWN OTTHUMG00000184764.1 211 211 1 ENSG00000252941.1 RNA5SP340 chr11 47804296 47804402 - rRNA KNOWN NA 107 107 1 ENSG00000252874.2 Y_RNA chr11 47820200 47820289 - misc_RNA NOVEL NA 90 90 1 ENSG00000271557.1 YPEL5P2 chr11 47841324 47841682 + processed_pseudogene KNOWN OTTHUMG00000184763.1 359 359 1 ENSG00000203785.7 SPRR2E chr1 153093135 153106184 - protein_coding KNOWN OTTHUMG00000014397.1 13050 734 4 ENSG00000254780.1 RP11-793I11.1 chr11 47905323 47905607 - processed_pseudogene KNOWN OTTHUMG00000166927.1 285 285 1 ENSG00000149177.11 PTPRJ chr11 47980558 48170841 + protein_coding KNOWN OTTHUMG00000166573.2 190284 9620 100 ENSG00000254879.1 PTPRJ-AS1 chr11 48014406 48015855 - antisense NOVEL OTTHUMG00000166634.1 1450 301 2 ENSG00000263693.1 MIR3161 chr11 48096782 48096858 + miRNA KNOWN NA 77 77 1 ENSG00000175619.2 OR4B1 chr11 48216792 48217762 + protein_coding KNOWN OTTHUMG00000166576.1 971 971 1 ENSG00000255514.1 OR4B2P chr11 48227429 48228310 + unprocessed_pseudogene KNOWN OTTHUMG00000166577.1 882 882 1 ENSG00000172208.5 OR4X2 chr11 48245056 48246080 + polymorphic_pseudogene KNOWN OTTHUMG00000165302.2 1025 1025 2 ENSG00000279556.1 OR4X2 chr11 48245104 48246015 + protein_coding KNOWN NA 912 912 1 ENSG00000176567.1 OR4X1 chr11 48263861 48264778 + protein_coding KNOWN NA 918 918 1 ENSG00000279260.1 OR4X1 chr11 48263861 48264778 + polymorphic_pseudogene KNOWN OTTHUMG00000165301.1 918 918 2 ENSG00000244094.1 SPRR2F chr1 153112114 153113515 - protein_coding KNOWN OTTHUMG00000014398.1 1402 681 2 ENSG00000176555.1 OR4S1 chr11 48306223 48307152 + protein_coding KNOWN OTTHUMG00000166578.1 930 930 1 ENSG00000176547.8 OR4C3 chr11 48324920 48328471 + protein_coding KNOWN OTTHUMG00000166579.2 3552 1058 4 ENSG00000197161.7 OR4C4P chr11 48345351 48352447 - unprocessed_pseudogene KNOWN OTTHUMG00000169508.1 7097 931 2 ENSG00000176540.3 OR4C5 chr11 48365485 48366465 - protein_coding KNOWN OTTHUMG00000169462.2 981 981 1 ENSG00000182565.8 OR4C2P chr11 48420210 48421273 + unprocessed_pseudogene KNOWN OTTHUMG00000166580.1 1064 1064 1 ENSG00000184789.6 OR4C10P chr11 48432217 48433147 - unprocessed_pseudogene KNOWN OTTHUMG00000154239.1 931 931 1 ENSG00000254925.1 OR4C9P chr11 48464053 48464977 - unprocessed_pseudogene KNOWN OTTHUMG00000166635.1 925 925 1 ENSG00000255215.1 OR4R1P chr11 48486363 48486825 - unprocessed_pseudogene KNOWN OTTHUMG00000166636.1 463 463 1 ENSG00000237388.2 OR4A47 chr11 48488717 48489780 + protein_coding KNOWN OTTHUMG00000166581.1 1064 1064 1 ENSG00000255113.1 OR4A48P chr11 48492026 48492416 + unprocessed_pseudogene KNOWN OTTHUMG00000166582.1 391 391 1 ENSG00000229035.2 SPRR2C chr1 153140491 153140709 - unprocessed_pseudogene KNOWN OTTHUMG00000013864.2 219 219 1 ENSG00000255304.1 OR4A46P chr11 48496348 48497280 + unprocessed_pseudogene KNOWN OTTHUMG00000166583.1 933 933 1 ENSG00000254832.1 OR4A40P chr11 48512273 48513220 + unprocessed_pseudogene KNOWN OTTHUMG00000166584.1 948 948 1 ENSG00000255534.1 OR4A43P chr11 48526064 48526971 + unprocessed_pseudogene KNOWN OTTHUMG00000166585.1 908 908 1 ENSG00000213607.4 OR4A45P chr11 48579436 48580336 + unprocessed_pseudogene KNOWN OTTHUMG00000166604.1 901 901 1 ENSG00000255297.1 OR4A41P chr11 48589760 48590687 + unprocessed_pseudogene KNOWN OTTHUMG00000166605.1 928 928 1 ENSG00000254674.1 OR4A42P chr11 48610063 48611000 + unprocessed_pseudogene KNOWN OTTHUMG00000166606.1 938 938 1 ENSG00000255053.1 OR4A44P chr11 48627546 48628493 + unprocessed_pseudogene KNOWN OTTHUMG00000166607.1 948 948 1 ENSG00000255551.1 RP11-56P9.5 chr11 48880111 48885237 + unprocessed_pseudogene KNOWN OTTHUMG00000166608.1 5127 931 3 ENSG00000254728.1 RP11-56P9.10 chr11 48881723 48902181 - unprocessed_pseudogene KNOWN OTTHUMG00000166637.1 20459 3707 10 ENSG00000254920.1 RP11-56P9.6 chr11 48893256 48898703 + unprocessed_pseudogene KNOWN OTTHUMG00000166610.2 5448 816 4 ENSG00000159516.8 SPRR2G chr1 153149582 153150869 - protein_coding KNOWN OTTHUMG00000014399.1 1288 568 2 ENSG00000255527.1 RP11-56P9.4 chr11 48907103 48908946 + unprocessed_pseudogene KNOWN OTTHUMG00000166611.1 1844 755 2 ENSG00000249910.3 TRIM51CP chr11 48945694 48951895 + unprocessed_pseudogene KNOWN OTTHUMG00000160550.2 6202 1357 6 ENSG00000254517.1 RP11-56P9.8 chr11 48959928 48961810 + unprocessed_pseudogene KNOWN OTTHUMG00000166621.1 1883 440 4 ENSG00000220948.4 TRIM51GP chr11 48975501 48981695 - unprocessed_pseudogene KNOWN OTTHUMG00000165215.1 6195 1350 6 ENSG00000254764.1 TRIM53CP chr11 48985871 48991881 - unprocessed_pseudogene KNOWN OTTHUMG00000166638.1 6011 1354 5 ENSG00000205044.3 RP11-56P9.11 chr11 49013943 49015894 - unprocessed_pseudogene KNOWN OTTHUMG00000166698.1 1952 819 3 ENSG00000182053.11 TRIM49B chr11 49027501 49038451 + protein_coding KNOWN OTTHUMG00000186986.1 10951 2162 15 ENSG00000214891.7 TRIM64C chr11 49053714 49059112 - protein_coding KNOWN OTTHUMG00000166752.1 5399 1383 13 ENSG00000276637.1 CTD-2132H18.5 chr11 49067610 49069301 + unprocessed_pseudogene KNOWN OTTHUMG00000187735.1 1692 573 2 ENSG00000254801.1 CTD-2132H18.3 chr11 49070752 49071000 - processed_pseudogene KNOWN OTTHUMG00000166639.1 249 249 1 ENSG00000229699.1 RP1-140J1.1 chr1 153174518 153191676 + lincRNA NOVEL OTTHUMG00000013934.1 17159 2254 3 ENSG00000229361.5 UBTFL7 chr11 49081907 49083097 + processed_pseudogene KNOWN OTTHUMG00000165234.1 1191 1191 1 ENSG00000255452.1 RP11-107P7.1 chr11 49092404 49092767 + processed_pseudogene KNOWN OTTHUMG00000166623.1 364 364 1 ENSG00000254412.1 RP11-107P7.6 chr11 49098163 49101168 - processed_pseudogene KNOWN OTTHUMG00000166640.1 3006 3006 1 ENSG00000255338.1 RP11-107P7.2 chr11 49110756 49111220 + processed_pseudogene KNOWN OTTHUMG00000166624.1 465 465 1 ENSG00000254993.1 TRIM77BP chr11 49117019 49124570 - unprocessed_pseudogene KNOWN OTTHUMG00000166641.1 7552 1119 4 ENSG00000254567.2 UBTFL9 chr11 49133653 49134800 - processed_pseudogene KNOWN OTTHUMG00000166642.2 1148 1148 1 ENSG00000086205.15 FOLH1 chr11 49146635 49208670 - protein_coding KNOWN OTTHUMG00000166625.1 62036 3824 152 ENSG00000255532.1 CTD-2026G22.1 chr11 49305714 49379669 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000166626.2 73956 1286 12 ENSG00000123447.6 TYRL chr11 49405091 49415789 - unprocessed_pseudogene KNOWN OTTHUMG00000166674.3 10699 441 2 ENSG00000254496.1 CBX3P8 chr11 49406190 49406714 + processed_pseudogene KNOWN OTTHUMG00000166649.1 525 525 1 ENSG00000203784.2 LELP1 chr1 153203443 153205120 + protein_coding KNOWN OTTHUMG00000013935.1 1678 523 2 ENSG00000226268.3 RP11-61N20.3 chr11 49433480 49434438 - processed_pseudogene KNOWN OTTHUMG00000166675.3 959 959 1 ENSG00000205035.7 RP11-707M1.1 chr11 49558546 49810419 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000166650.5 251874 2366 21 ENSG00000254487.2 RP11-707M1.7 chr11 49817778 49825553 + unprocessed_pseudogene KNOWN OTTHUMG00000166761.2 7776 795 5 ENSG00000255268.2 RP11-707M1.9 chr11 49824839 49826724 - unprocessed_pseudogene KNOWN OTTHUMG00000166902.2 1886 604 3 ENSG00000219061.4 TRIM51FP chr11 49833140 49839320 - unprocessed_pseudogene KNOWN OTTHUMG00000166724.3 6181 1353 10 ENSG00000265973.1 RP11-163O19.16 chr11 49843488 49846533 - unprocessed_pseudogene KNOWN OTTHUMG00000179739.1 3046 1091 3 ENSG00000254714.1 RP11-163O19.1 chr11 49850629 49862528 + unprocessed_pseudogene KNOWN OTTHUMG00000166662.2 11900 1502 8 ENSG00000255550.1 RP11-163O19.11 chr11 49854080 49859402 - unprocessed_pseudogene KNOWN OTTHUMG00000166677.2 5323 739 4 ENSG00000255214.1 RP11-163O19.10 chr11 49871826 49874067 - unprocessed_pseudogene KNOWN OTTHUMG00000166678.1 2242 529 2 ENSG00000255190.2 TRIM51DP chr11 49874945 49876638 + processed_pseudogene KNOWN OTTHUMG00000166679.2 1694 596 2 ENSG00000203783.4 PRR9 chr1 153217584 153219317 + protein_coding KNOWN OTTHUMG00000013936.1 1734 1229 2 ENSG00000254800.2 RP11-163O19.3 chr11 49882999 49884093 + processed_pseudogene KNOWN OTTHUMG00000166680.2 1095 493 2 ENSG00000255111.1 RP11-163O19.8 chr11 49892262 49893777 - processed_pseudogene KNOWN OTTHUMG00000166681.2 1516 1516 1 ENSG00000254408.1 OR4A1P chr11 49898267 49899186 - unprocessed_pseudogene KNOWN OTTHUMG00000166682.1 920 920 1 ENSG00000254472.1 OR4A49P chr11 49915013 49915644 - unprocessed_pseudogene KNOWN OTTHUMG00000166755.1 632 632 1 ENSG00000254637.1 OR4A18P chr11 49917391 49918478 - unprocessed_pseudogene KNOWN OTTHUMG00000166756.1 1088 1088 1 ENSG00000254940.1 OR4A19P chr11 49920312 49921414 - unprocessed_pseudogene KNOWN OTTHUMG00000166757.1 1103 1103 1 ENSG00000254624.1 OR4R3P chr11 49923049 49923886 + unprocessed_pseudogene KNOWN OTTHUMG00000166685.2 838 838 1 ENSG00000258817.1 OR4C13 chr11 49952391 49953419 + protein_coding KNOWN OTTHUMG00000166686.1 1029 1029 1 ENSG00000221954.2 OR4C12 chr11 49981473 49982535 - protein_coding KNOWN OTTHUMG00000166687.1 1063 1063 1 ENSG00000260811.1 OR4C45 chr11 50032874 50033794 + unprocessed_pseudogene KNOWN OTTHUMG00000175623.1 921 921 1 ENSG00000233268.3 RP11-558F24.2 chr1 9660828 9662626 - processed_pseudogene KNOWN OTTHUMG00000001453.3 1799 421 2 ENSG00000230779.1 RP1-140J1.4 chr1 153225080 153226006 + processed_pseudogene KNOWN OTTHUMG00000013937.1 927 927 1 ENSG00000260595.1 OR4C49P chr11 50053410 50054309 - unprocessed_pseudogene KNOWN OTTHUMG00000175624.1 900 900 1 ENSG00000255199.2 RP11-227P3.1 chr11 50100892 50102898 - unprocessed_pseudogene KNOWN OTTHUMG00000166758.2 2007 420 3 ENSG00000255442.1 RP11-347H15.1 chr11 50170156 50190441 + unprocessed_pseudogene KNOWN OTTHUMG00000166688.1 20286 962 3 ENSG00000236919.3 RP11-347H15.6 chr11 50246554 50247761 - unprocessed_pseudogene KNOWN OTTHUMG00000166903.1 1208 490 4 ENSG00000255500.2 RP11-347H15.2 chr11 50268161 50269273 + processed_pseudogene KNOWN OTTHUMG00000166689.2 1113 1113 1 ENSG00000255042.1 RP11-347H15.5 chr11 50287661 50295334 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000166690.1 7674 360 3 ENSG00000255001.1 RP11-347H15.3 chr11 50290749 50290933 + processed_pseudogene KNOWN OTTHUMG00000166691.1 185 185 1 ENSG00000254518.1 RP11-347H15.4 chr11 50298579 50304656 + lincRNA NOVEL OTTHUMG00000166692.1 6078 724 5 ENSG00000254840.1 RP11-574M7.1 chr11 50307681 50361706 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000166693.1 54026 1562 13 ENSG00000214883.4 RP11-574M7.2 chr11 50409042 50422316 + unprocessed_pseudogene KNOWN OTTHUMG00000166694.3 13275 1042 8 ENSG00000203782.5 LOR chr1 153259700 153262122 + protein_coding KNOWN OTTHUMG00000013938.1 2423 1230 2 ENSG00000237610.1 OR4C50P chr11 54591480 54592409 + unprocessed_pseudogene KNOWN OTTHUMG00000154323.1 930 930 1 ENSG00000185926.1 OR4C46 chr11 54603069 54603998 - protein_coding KNOWN OTTHUMG00000166705.1 930 930 1 ENSG00000255312.1 OR4C7P chr11 54635037 54635955 - unprocessed_pseudogene KNOWN OTTHUMG00000166704.1 919 919 1 ENSG00000255560.1 OR4R2P chr11 54657120 54657716 - unprocessed_pseudogene KNOWN OTTHUMG00000166703.1 597 597 1 ENSG00000254769.3 OR4A4P chr11 54659666 54660595 + unprocessed_pseudogene KNOWN OTTHUMG00000166768.1 930 930 1 ENSG00000254464.1 OR4A3P chr11 54662580 54663450 + unprocessed_pseudogene KNOWN OTTHUMG00000166767.1 871 871 1 ENSG00000227547.3 OR4A2P chr11 54667298 54668210 + unprocessed_pseudogene KNOWN OTTHUMG00000166766.1 913 913 1 ENSG00000225997.1 OR4A8 chr11 54682877 54683821 + polymorphic_pseudogene KNOWN OTTHUMG00000154245.2 945 945 1 ENSG00000255349.1 OR4A7P chr11 54692450 54693359 + unprocessed_pseudogene KNOWN OTTHUMG00000166765.1 910 910 1 ENSG00000221840.3 OR4A5 chr11 54706885 54707832 + protein_coding KNOWN OTTHUMG00000166764.1 948 948 1 ENSG00000159527.3 PGLYRP3 chr1 153297862 153310718 - protein_coding KNOWN OTTHUMG00000014044.1 12857 1173 7 ENSG00000255078.1 OR4A6P chr11 54724847 54725816 + unprocessed_pseudogene KNOWN OTTHUMG00000166763.1 970 970 1 ENSG00000264637.1 AC110283.1 chr11 54855186 54855271 + miRNA NOVEL NA 86 86 1 ENSG00000150244.11 TRIM48 chr11 55262182 55271119 + protein_coding KNOWN OTTHUMG00000157011.1 8938 1445 6 ENSG00000255543.1 RP11-72M10.2 chr11 55267408 55267636 + processed_pseudogene KNOWN OTTHUMG00000166706.1 229 229 1 ENSG00000255283.3 RP11-72M10.4 chr11 55279447 55284749 - unprocessed_pseudogene KNOWN OTTHUMG00000166769.3 5303 799 4 ENSG00000255110.1 RP11-72M10.8 chr11 55279949 55280289 + unprocessed_pseudogene KNOWN OTTHUMG00000167392.1 341 341 1 ENSG00000254696.1 RP11-72M10.7 chr11 55282502 55282977 + unprocessed_pseudogene KNOWN OTTHUMG00000166774.1 476 476 1 ENSG00000166007.11 TRIM51HP chr11 55291883 55298270 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000166775.3 6388 1878 8 ENSG00000254828.1 RP11-72M10.5 chr11 55302290 55305060 - unprocessed_pseudogene KNOWN OTTHUMG00000166776.2 2771 802 3 ENSG00000254663.1 OR4A11P chr11 55318560 55319465 + unprocessed_pseudogene KNOWN OTTHUMG00000166708.1 906 906 1 ENSG00000163218.13 PGLYRP4 chr1 153330120 153348840 - protein_coding KNOWN OTTHUMG00000037057.1 18721 2272 21 ENSG00000254723.1 OR4A12P chr11 55325756 55326673 + unprocessed_pseudogene KNOWN OTTHUMG00000166709.1 918 918 1 ENSG00000181961.3 OR4A16 chr11 55343201 55344187 + protein_coding KNOWN OTTHUMG00000166710.1 987 987 1 ENSG00000181958.3 OR4A15 chr11 55367884 55368918 + protein_coding KNOWN OTTHUMG00000166711.1 1035 1035 1 ENSG00000254891.1 OR4A9P chr11 55388529 55389472 + unprocessed_pseudogene KNOWN OTTHUMG00000166712.1 944 944 1 ENSG00000255077.1 OR4X7P chr11 55411526 55411717 + unprocessed_pseudogene KNOWN OTTHUMG00000166777.1 192 192 1 ENSG00000255493.1 RP11-131J4.12 chr11 55430487 55430994 + unprocessed_pseudogene KNOWN OTTHUMG00000166798.1 508 508 1 ENSG00000254886.1 OR4A10P chr11 55431957 55432367 + unprocessed_pseudogene KNOWN OTTHUMG00000166778.1 411 411 1 ENSG00000255196.1 OR4A17P chr11 55444435 55445338 + unprocessed_pseudogene KNOWN OTTHUMG00000166779.1 904 904 1 ENSG00000181950.3 OR4A13P chr11 55466771 55467712 + unprocessed_pseudogene KNOWN OTTHUMG00000166780.1 942 942 1 ENSG00000255294.1 OR4A50P chr11 55475943 55476428 + unprocessed_pseudogene KNOWN OTTHUMG00000166781.1 486 486 1 ENSG00000207321.1 RNU6-160P chr1 153331622 153331728 + snRNA KNOWN NA 107 107 1 ENSG00000254962.1 OR4A14P chr11 55477551 55478509 + unprocessed_pseudogene KNOWN OTTHUMG00000166782.1 959 959 1 ENSG00000181943.4 OR4A21P chr11 55491152 55492142 + unprocessed_pseudogene KNOWN OTTHUMG00000167393.1 991 991 1 ENSG00000254576.1 OR4C1P chr11 55509741 55510671 + unprocessed_pseudogene KNOWN OTTHUMG00000166713.2 931 931 1 ENSG00000233301.1 OR4C14P chr11 55537002 55537924 + unprocessed_pseudogene KNOWN OTTHUMG00000154243.1 923 923 1 ENSG00000181939.2 OR4C15 chr11 55554307 55555419 + protein_coding KNOWN OTTHUMG00000166714.2 1113 1113 1 ENSG00000181935.3 OR4C16 chr11 55572128 55573060 + protein_coding KNOWN NA 933 933 1 ENSG00000279514.1 OR4C16 chr11 55572128 55573060 + polymorphic_pseudogene KNOWN OTTHUMG00000165198.1 933 933 2 ENSG00000172188.4 OR4C11 chr11 55603354 55604398 - protein_coding KNOWN OTTHUMG00000165290.2 1045 1045 1 ENSG00000181927.2 OR4P4 chr11 55638358 55639296 + protein_coding KNOWN OTTHUMG00000165300.1 939 939 1 ENSG00000174982.2 OR4S2 chr11 55650904 55651839 + protein_coding KNOWN OTTHUMG00000166799.1 936 936 1 ENSG00000163220.10 S100A9 chr1 153357854 153361027 + protein_coding KNOWN OTTHUMG00000013125.1 3174 577 3 ENSG00000181903.4 OR4C6 chr11 55665167 55666096 + protein_coding KNOWN OTTHUMG00000166800.1 930 930 1 ENSG00000254841.1 OR4V1P chr11 55673536 55674675 + unprocessed_pseudogene KNOWN OTTHUMG00000166801.1 1140 1140 1 ENSG00000188439.3 OR4P1P chr11 55683239 55684374 + unprocessed_pseudogene KNOWN OTTHUMG00000166802.1 1136 1136 1 ENSG00000254804.1 RP11-674C21.9 chr11 55684141 55686160 - lincRNA NOVEL OTTHUMG00000166803.1 2020 345 2 ENSG00000254457.1 OR5D2P chr11 55714996 55715632 + unprocessed_pseudogene KNOWN OTTHUMG00000166804.1 637 637 1 ENSG00000186886.6 OR5D3P chr11 55726118 55727158 + unprocessed_pseudogene KNOWN OTTHUMG00000166805.2 1041 1041 1 ENSG00000181837.6 OR5D17P chr11 55754976 55755953 + unprocessed_pseudogene KNOWN OTTHUMG00000166806.1 978 978 1 ENSG00000198877.1 OR5D13 chr11 55773438 55774382 + protein_coding KNOWN NA 945 945 1 ENSG00000279761.1 OR5D13 chr11 55773438 55774382 + polymorphic_pseudogene KNOWN OTTHUMG00000166807.1 945 945 2 ENSG00000255019.1 OR5D15P chr11 55786964 55787905 + unprocessed_pseudogene KNOWN OTTHUMG00000166808.1 942 942 1 ENSG00000163221.8 S100A12 chr1 153373706 153375649 - protein_coding KNOWN OTTHUMG00000013127.2 1944 518 3 ENSG00000186113.1 OR5D14 chr11 55795556 55796500 + protein_coding KNOWN OTTHUMG00000166809.1 945 945 1 ENSG00000279395.1 OR5L1 chr11 55811367 55812476 + polymorphic_pseudogene KNOWN OTTHUMG00000166810.1 1110 1110 2 ENSG00000186117.3 OR5L1 chr11 55811467 55812402 + protein_coding KNOWN NA 936 936 1 ENSG00000186119.7 OR5D18 chr11 55819630 55820571 + protein_coding KNOWN OTTHUMG00000166811.1 942 942 1 ENSG00000205030.1 OR5L2 chr11 55827219 55828154 + protein_coding KNOWN OTTHUMG00000166812.1 936 936 1 ENSG00000205029.1 OR5D16 chr11 55838752 55839738 + protein_coding KNOWN OTTHUMG00000154233.1 987 987 1 ENSG00000186124.3 OR9M1P chr11 55855592 55856512 + unprocessed_pseudogene KNOWN OTTHUMG00000154234.1 921 921 1 ENSG00000255204.1 RP11-738O11.9 chr11 55863932 55881243 + unprocessed_pseudogene KNOWN OTTHUMG00000166813.2 17312 901 2 ENSG00000255499.1 RP11-738O11.12 chr11 55865709 55865820 + processed_pseudogene KNOWN OTTHUMG00000166814.1 112 112 1 ENSG00000254547.1 RP11-738O11.13 chr11 55867569 55874537 - unprocessed_pseudogene KNOWN OTTHUMG00000166816.2 6969 1582 4 ENSG00000237008.2 AL591704.5 chr1 153379821 153380799 - processed_pseudogene KNOWN OTTHUMG00000013126.2 979 690 2 ENSG00000124900.11 TRIM51 chr11 55883297 55891810 + protein_coding KNOWN OTTHUMG00000156437.3 8514 1832 12 ENSG00000227806.1 OR5W1P chr11 55903341 55904278 - unprocessed_pseudogene KNOWN OTTHUMG00000154235.1 938 938 1 ENSG00000187612.1 OR5W2 chr11 55913650 55914582 - protein_coding KNOWN OTTHUMG00000166818.1 933 933 1 ENSG00000167825.3 OR5I1 chr11 55935456 55936400 - protein_coding KNOWN OTTHUMG00000166821.1 945 945 1 ENSG00000255416.1 OR10AF1P chr11 55948120 55948924 - unprocessed_pseudogene KNOWN OTTHUMG00000166822.1 805 805 1 ENSG00000254807.1 OR10AK1P chr11 55957216 55957630 - unprocessed_pseudogene KNOWN OTTHUMG00000166823.1 415 415 1 ENSG00000174970.3 OR10AG1 chr11 55967558 55968463 - protein_coding KNOWN OTTHUMG00000166824.1 906 906 1 ENSG00000214880.3 OR7E5P chr11 55979398 55980103 - unprocessed_pseudogene KNOWN OTTHUMG00000166911.1 706 706 1 ENSG00000149133.1 OR5F1 chr11 55993681 55994625 - protein_coding KNOWN OTTHUMG00000166825.1 945 945 1 ENSG00000182365.4 OR5F2P chr11 56015017 56015957 - unprocessed_pseudogene KNOWN OTTHUMG00000166837.1 941 941 1 ENSG00000143546.8 S100A8 chr1 153390032 153391188 - protein_coding KNOWN OTTHUMG00000013124.2 1157 1006 8 ENSG00000181785.1 OR5AS1 chr11 56030419 56031393 + protein_coding KNOWN OTTHUMG00000166830.1 975 975 1 ENSG00000184741.5 OR5AQ1P chr11 56054364 56055299 + unprocessed_pseudogene KNOWN OTTHUMG00000166838.1 936 936 1 ENSG00000181780.4 OR5J1P chr11 56071111 56072049 + unprocessed_pseudogene KNOWN OTTHUMG00000154228.1 939 939 1 ENSG00000225538.1 OR5BE1P chr11 56082801 56083739 + unprocessed_pseudogene KNOWN OTTHUMG00000154221.1 939 939 1 ENSG00000172154.7 OR8I2 chr11 56093308 56094240 + protein_coding KNOWN OTTHUMG00000166831.2 933 933 2 ENSG00000254524.1 OR8I4P chr11 56097244 56097384 - unprocessed_pseudogene KNOWN OTTHUMG00000166839.1 141 141 1 ENSG00000181767.2 OR8H2 chr11 56105018 56106055 + protein_coding KNOWN OTTHUMG00000166832.1 1038 1038 2 ENSG00000255140.1 OR5BN2P chr11 56116639 56117256 - unprocessed_pseudogene KNOWN OTTHUMG00000166840.1 618 618 1 ENSG00000181761.5 OR8H3 chr11 56122373 56123311 + protein_coding KNOWN OTTHUMG00000166833.1 939 939 1 ENSG00000254848.1 OR5BN1P chr11 56132666 56133494 - unprocessed_pseudogene KNOWN OTTHUMG00000166841.1 829 829 1 ENSG00000224784.2 AL591704.7 chr1 153396591 153396771 - processed_pseudogene KNOWN OTTHUMG00000013128.2 181 181 1 ENSG00000167822.1 OR8J3 chr11 56136771 56137718 - protein_coding KNOWN OTTHUMG00000166834.1 948 948 1 ENSG00000254947.1 OR8K4P chr11 56142516 56143387 - unprocessed_pseudogene KNOWN OTTHUMG00000166842.1 872 872 1 ENSG00000181752.3 OR8K5 chr11 56159394 56160317 - protein_coding KNOWN OTTHUMG00000166820.2 924 924 1 ENSG00000255217.1 OR5J7P chr11 56165500 56165921 + unprocessed_pseudogene KNOWN OTTHUMG00000166843.1 422 422 1 ENSG00000174957.1 OR5J2 chr11 56176618 56177556 + protein_coding KNOWN OTTHUMG00000166835.1 939 939 1 ENSG00000230213.1 OR8V1P chr11 56188379 56189251 - unprocessed_pseudogene KNOWN OTTHUMG00000154220.1 873 873 1 ENSG00000213604.4 RP11-444K7.8 chr11 56205125 56205625 - processed_pseudogene KNOWN OTTHUMG00000166849.1 501 501 1 ENSG00000254658.2 OR8J2 chr11 56210873 56211820 - polymorphic_pseudogene KNOWN OTTHUMG00000166850.3 948 948 1 ENSG00000181718.5 OR5T2 chr11 56232106 56233185 - protein_coding KNOWN OTTHUMG00000166851.1 1080 1080 1 ENSG00000172489.5 OR5T3 chr11 56252200 56253222 + protein_coding KNOWN OTTHUMG00000166852.1 1023 1023 1 ENSG00000231789.2 PIK3CD-AS2 chr1 9672426 9687555 - antisense NOVEL OTTHUMG00000001449.2 15130 939 3 ENSG00000184330.10 S100A7A chr1 153416524 153423225 + protein_coding KNOWN OTTHUMG00000013122.2 6702 4457 8 ENSG00000181698.3 OR5T1 chr11 56275639 56276619 + protein_coding KNOWN OTTHUMG00000166853.1 981 981 1 ENSG00000181693.7 OR8H1 chr11 56290053 56291090 - protein_coding KNOWN OTTHUMG00000162671.1 1038 1038 3 ENSG00000255461.1 OR8I1P chr11 56296541 56297471 - unprocessed_pseudogene KNOWN OTTHUMG00000166854.1 931 931 1 ENSG00000181689.1 OR8K3 chr11 56318307 56319245 + protein_coding KNOWN NA 939 939 1 ENSG00000280314.1 OR8K3 chr11 56318307 56319245 + polymorphic_pseudogene KNOWN OTTHUMG00000166855.1 939 939 2 ENSG00000254722.1 FAM8A2P chr11 56331347 56332488 - unprocessed_pseudogene KNOWN OTTHUMG00000166856.1 1142 1142 1 ENSG00000255134.1 OR8K2P chr11 56335142 56336068 + unprocessed_pseudogene KNOWN OTTHUMG00000166857.1 927 927 1 ENSG00000150261.3 OR8K1 chr11 56346039 56346998 + protein_coding KNOWN OTTHUMG00000166858.1 960 960 1 ENSG00000242208.1 RPL5P29 chr11 56357328 56358221 + processed_pseudogene KNOWN OTTHUMG00000158391.1 894 894 1 ENSG00000172487.3 OR8J1 chr11 56360215 56361288 + protein_coding KNOWN OTTHUMG00000166859.2 1074 1074 1 ENSG00000203781.4 AL591704.9 chr1 153427020 153428401 - unprocessed_pseudogene KNOWN OTTHUMG00000013121.2 1382 275 2 ENSG00000172199.1 OR8U1 chr11 56375624 56376553 + protein_coding KNOWN OTTHUMG00000166860.1 930 930 1 ENSG00000254903.1 OR8L1P chr11 56381635 56382589 + unprocessed_pseudogene KNOWN OTTHUMG00000166871.1 955 955 1 ENSG00000255466.1 OR5AL2P chr11 56393729 56394648 + unprocessed_pseudogene KNOWN OTTHUMG00000166872.1 920 920 1 ENSG00000272987.1 OR5AL1 chr11 56412696 56413680 + polymorphic_pseudogene KNOWN OTTHUMG00000154218.2 985 985 1 ENSG00000181395.6 OR5AL1 chr11 56412744 56413668 + pseudogene KNOWN NA 925 924 2 ENSG00000174942.1 OR5R1 chr11 56417258 56418232 - protein_coding KNOWN NA 975 975 1 ENSG00000279961.1 OR5R1 chr11 56417258 56418232 - polymorphic_pseudogene KNOWN OTTHUMG00000154219.1 975 975 2 ENSG00000230416.3 OR5M4P chr11 56448668 56449592 + unprocessed_pseudogene KNOWN OTTHUMG00000166873.1 925 925 1 ENSG00000150269.1 OR5M9 chr11 56462469 56463401 - protein_coding KNOWN OTTHUMG00000166874.1 933 933 1 ENSG00000174937.3 OR5M3 chr11 56469574 56470497 - protein_coding KNOWN OTTHUMG00000166875.1 924 924 1 ENSG00000197364.6 S100A7L2 chr1 153437058 153439949 - protein_coding KNOWN OTTHUMG00000013129.2 2892 339 3 ENSG00000254752.1 OR5M2P chr11 56479492 56480427 - unprocessed_pseudogene KNOWN OTTHUMG00000166876.1 936 936 1 ENSG00000181371.3 OR5M8 chr11 56490435 56491370 - protein_coding KNOWN OTTHUMG00000166877.1 936 936 1 ENSG00000254411.1 CTD-3051L14.13 chr11 56495760 56496412 + processed_pseudogene KNOWN OTTHUMG00000166878.1 653 653 1 ENSG00000254490.1 OR5M7P chr11 56500300 56501271 - unprocessed_pseudogene KNOWN OTTHUMG00000166879.1 972 972 1 ENSG00000254660.1 CTD-3051L14.14 chr11 56509573 56510195 + processed_pseudogene KNOWN OTTHUMG00000166880.1 623 623 1 ENSG00000254603.1 OR5M6P chr11 56512235 56513171 - unprocessed_pseudogene KNOWN OTTHUMG00000166881.1 937 937 1 ENSG00000185701.7 OR5M5P chr11 56526568 56527503 - unprocessed_pseudogene KNOWN OTTHUMG00000166882.2 936 936 1 ENSG00000255223.3 OR5M11 chr11 56542340 56543257 - protein_coding KNOWN OTTHUMG00000166861.1 918 918 1 ENSG00000254834.3 OR5M10 chr11 56576774 56577721 - protein_coding KNOWN OTTHUMG00000166862.1 948 948 1 ENSG00000166693.7 OR5M13P chr11 56597426 56598362 - unprocessed_pseudogene KNOWN OTTHUMG00000154216.1 937 937 1 ENSG00000143556.7 S100A7 chr1 153457744 153460701 - protein_coding KNOWN OTTHUMG00000013123.1 2958 536 6 ENSG00000255012.1 OR5M1 chr11 56612555 56613502 - protein_coding KNOWN OTTHUMG00000166863.1 948 948 1 ENSG00000255172.2 OR5AM1P chr11 56619779 56620810 - unprocessed_pseudogene KNOWN OTTHUMG00000186005.1 1032 1032 1 ENSG00000197866.3 OR5M12P chr11 56628932 56629860 + unprocessed_pseudogene KNOWN OTTHUMG00000154214.2 929 929 1 ENSG00000254795.1 OR5AP1P chr11 56633164 56634103 - unprocessed_pseudogene KNOWN OTTHUMG00000166864.1 940 940 1 ENSG00000172464.2 OR5AP2 chr11 56641466 56642471 - protein_coding KNOWN OTTHUMG00000166865.1 1006 1006 2 ENSG00000172459.3 OR5AR1 chr11 56663662 56664687 + polymorphic_pseudogene KNOWN OTTHUMG00000154213.3 1026 1026 2 ENSG00000279911.1 OR5AR1 chr11 56663686 56664618 + protein_coding KNOWN NA 933 933 1 ENSG00000232511.3 OR2AH1P chr11 56669017 56669944 - unprocessed_pseudogene KNOWN OTTHUMG00000154208.1 928 928 1 ENSG00000238041.3 RP11-59K5.1 chr11 56690465 56690723 + processed_pseudogene KNOWN OTTHUMG00000167111.1 259 259 1 ENSG00000174914.1 OR9G1 chr11 56700388 56701305 + protein_coding KNOWN OTTHUMG00000167112.1 918 918 1 ENSG00000263841.2 RN7SL44P chr1 153500463 153500764 - misc_RNA KNOWN NA 302 302 1 ENSG00000254953.1 RP11-100N3.2 chr11 56736316 56736462 - processed_pseudogene KNOWN OTTHUMG00000166930.1 147 147 1 ENSG00000181325.7 OR9G3P chr11 56740179 56741096 + unprocessed_pseudogene KNOWN OTTHUMG00000166931.1 918 918 1 ENSG00000172457.5 OR9G4 chr11 56742827 56743811 - protein_coding KNOWN OTTHUMG00000166932.1 985 985 1 ENSG00000274770.1 MIR6128 chr11 56743873 56743981 + miRNA KNOWN NA 109 109 1 ENSG00000254825.1 OR9G2P chr11 56751023 56751902 - unprocessed_pseudogene KNOWN OTTHUMG00000166933.1 880 880 1 ENSG00000181296.3 OR5G1P chr11 56775261 56776206 - unprocessed_pseudogene KNOWN OTTHUMG00000167016.1 946 946 1 ENSG00000255485.1 OR5G4P chr11 56790206 56790965 - unprocessed_pseudogene KNOWN OTTHUMG00000167017.1 760 760 1 ENSG00000205025.7 OR5G5P chr11 56801856 56820422 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000154297.3 18567 1403 8 ENSG00000241356.1 OR5G3 chr11 56819576 56820504 - polymorphic_pseudogene KNOWN OTTHUMG00000154395.2 929 929 1 ENSG00000255433.4 AP000479.1 chr11 56848478 56878078 + lincRNA NOVEL OTTHUMG00000166934.3 29601 2901 7 ENSG00000238279.1 BX470102.3 chr1 153533603 153535115 + antisense NOVEL OTTHUMG00000013548.1 1513 531 2 ENSG00000274150.1 FADS2P1 chr11 56890613 56927885 + unprocessed_pseudogene KNOWN OTTHUMG00000187766.1 37273 1446 12 ENSG00000181282.4 OR5AK3P chr11 56970850 56972146 + unprocessed_pseudogene KNOWN OTTHUMG00000167018.1 1297 1297 1 ENSG00000181273.2 OR5AK2 chr11 56988872 56989867 + protein_coding KNOWN OTTHUMG00000167019.1 996 996 1 ENSG00000255083.1 OR5AK1P chr11 57018100 57018886 + unprocessed_pseudogene KNOWN OTTHUMG00000167020.1 787 787 1 ENSG00000273228.1 OR5BQ1P chr11 57029408 57029722 + unprocessed_pseudogene KNOWN OTTHUMG00000186006.1 315 315 1 ENSG00000224196.1 OR5AK4P chr11 57037437 57037534 + unprocessed_pseudogene KNOWN OTTHUMG00000154396.1 98 98 1 ENSG00000272676.1 OR5AO1P chr11 57045091 57045390 + unprocessed_pseudogene KNOWN OTTHUMG00000186007.1 300 300 1 ENSG00000273255.1 OR5BP1P chr11 57055587 57056132 + unprocessed_pseudogene KNOWN OTTHUMG00000186008.1 546 546 1 ENSG00000281575.1 AP001786.1 chr11 57137920 57138064 - miRNA NOVEL NA 145 145 1 ENSG00000183908.5 LRRC55 chr11 57181747 57191717 + protein_coding KNOWN OTTHUMG00000159309.2 9971 5410 2 ENSG00000197956.8 S100A6 chr1 153534599 153536244 - protein_coding KNOWN OTTHUMG00000013549.3 1646 971 15 ENSG00000134817.10 APLNR chr11 57233577 57237314 - protein_coding KNOWN OTTHUMG00000167021.2 3738 3738 5 ENSG00000149115.12 TNKS1BP1 chr11 57299638 57324952 - protein_coding KNOWN OTTHUMG00000167022.2 25315 7149 43 ENSG00000254662.1 RP11-872D17.4 chr11 57325603 57327958 + antisense NOVEL OTTHUMG00000167023.1 2356 311 2 ENSG00000149136.6 SSRP1 chr11 57325985 57335877 - protein_coding KNOWN OTTHUMG00000167024.1 9893 6323 39 ENSG00000109991.7 P2RX3 chr11 57338374 57370600 + protein_coding KNOWN OTTHUMG00000167025.1 32227 2614 32 ENSG00000266018.1 AP000781.1 chr11 57359722 57359821 + miRNA NOVEL NA 100 100 1 ENSG00000156575.2 PRG3 chr11 57376769 57381150 - protein_coding KNOWN OTTHUMG00000167026.1 4382 869 6 ENSG00000186652.8 PRG2 chr11 57386794 57390657 - protein_coding KNOWN OTTHUMG00000167027.2 3864 1838 23 ENSG00000254979.4 RP11-872D17.8 chr11 57387365 57424059 - protein_coding NOVEL OTTHUMG00000167079.4 36695 2242 20 ENSG00000134802.16 SLC43A3 chr11 57406954 57427580 - protein_coding KNOWN OTTHUMG00000167113.1 20627 4517 165 ENSG00000196420.6 S100A5 chr1 153537147 153541765 - protein_coding KNOWN OTTHUMG00000013547.2 4619 784 7 ENSG00000252070.1 RNA5SP341 chr11 57450183 57450299 + rRNA KNOWN NA 117 117 1 ENSG00000222998.1 RN7SKP259 chr11 57451690 57452022 + misc_RNA KNOWN NA 333 333 1 ENSG00000186907.6 RTN4RL2 chr11 57460549 57477534 + protein_coding KNOWN OTTHUMG00000167028.1 16986 2387 9 ENSG00000255301.1 RP11-624G17.3 chr11 57476493 57477534 - antisense NOVEL OTTHUMG00000167029.1 1042 684 2 ENSG00000149150.7 SLC43A1 chr11 57484534 57515786 - protein_coding KNOWN OTTHUMG00000167030.2 31253 3532 77 ENSG00000280581.1 Y_RNA chr11 57510559 57510644 + misc_RNA NOVEL NA 86 86 1 ENSG00000265566.2 RN7SL605P chr11 57528085 57528365 - misc_RNA KNOWN NA 281 281 1 ENSG00000134809.7 TIMM10 chr11 57528463 57530803 - protein_coding KNOWN OTTHUMG00000167039.1 2341 777 9 ENSG00000214872.7 SMTNL1 chr11 57542641 57550274 + protein_coding KNOWN OTTHUMG00000167046.2 7634 1649 15 ENSG00000156587.14 UBE2L6 chr11 57551656 57568284 - protein_coding KNOWN OTTHUMG00000167047.1 16629 2197 19 ENSG00000196154.10 S100A4 chr1 153543613 153550136 - protein_coding KNOWN OTTHUMG00000013546.3 6524 1025 18 ENSG00000240371.1 RPS4XP13 chr11 57576292 57577080 - processed_pseudogene KNOWN OTTHUMG00000158394.1 789 789 1 ENSG00000149131.14 SERPING1 chr11 57597387 57614853 + protein_coding KNOWN OTTHUMG00000150304.2 17467 3603 66 ENSG00000254602.1 AP000662.4 chr11 57638024 57652790 + sense_overlapping NOVEL OTTHUMG00000167137.1 14767 3223 10 ENSG00000208009.1 MIR130A chr11 57641198 57641286 + miRNA KNOWN NA 89 89 1 ENSG00000166793.9 YPEL4 chr11 57645087 57649944 - protein_coding KNOWN OTTHUMG00000167138.3 4858 4460 39 ENSG00000172409.5 CLP1 chr11 57648992 57661868 + protein_coding KNOWN OTTHUMG00000167146.3 12877 2793 16 ENSG00000156599.9 ZDHHC5 chr11 57667747 57701187 + protein_coding KNOWN OTTHUMG00000167198.1 33441 5429 53 ENSG00000156603.13 MED19 chr11 57703714 57712221 - protein_coding KNOWN OTTHUMG00000167199.1 8508 1775 14 ENSG00000213593.8 TMX2 chr11 57712600 57740973 + protein_coding KNOWN OTTHUMG00000167200.2 28374 2246 49 ENSG00000254462.1 TMX2-CTNND1 chr11 57712605 57791586 + protein_coding NOVEL OTTHUMG00000167384.1 78982 585 4 ENSG00000188015.8 S100A3 chr1 153547329 153549372 - protein_coding KNOWN OTTHUMG00000013550.2 2044 955 6 ENSG00000213592.4 AP000662.9 chr11 57718044 57718530 - processed_pseudogene KNOWN OTTHUMG00000167201.1 487 487 1 ENSG00000211450.8 C11orf31 chr11 57741250 57743554 + protein_coding KNOWN OTTHUMG00000167202.6 2305 2305 22 ENSG00000254732.1 RP11-691N7.6 chr11 57742163 57793243 + protein_coding NOVEL OTTHUMG00000167374.1 51081 580 4 ENSG00000233436.6 BTBD18 chr11 57743514 57751781 - protein_coding KNOWN OTTHUMG00000167203.2 8268 3188 8 ENSG00000198561.11 CTNND1 chr11 57753243 57819546 + protein_coding KNOWN OTTHUMG00000167272.3 66304 8833 583 ENSG00000255303.1 OR5BA1P chr11 57866298 57867279 - unprocessed_pseudogene KNOWN OTTHUMG00000167385.1 982 982 1 ENSG00000255266.1 RP11-734C14.2 chr11 57870322 57870571 - processed_pseudogene KNOWN OTTHUMG00000167386.1 250 250 1 ENSG00000180714.3 OR5AZ1P chr11 57917297 57918239 - unprocessed_pseudogene KNOWN OTTHUMG00000167564.1 943 943 1 ENSG00000254749.1 OR5BD1P chr11 57945598 57946414 - unprocessed_pseudogene KNOWN OTTHUMG00000167565.1 817 817 1 ENSG00000254601.1 CYCSP26 chr11 58005386 58005705 + processed_pseudogene KNOWN OTTHUMG00000167387.1 320 320 1 ENSG00000171603.15 CLSTN1 chr1 9729026 9824526 - protein_coding KNOWN OTTHUMG00000001451.1 95501 5559 57 ENSG00000196754.9 S100A2 chr1 153561108 153567890 - protein_coding KNOWN OTTHUMG00000035031.3 6783 1567 18 ENSG00000186509.4 OR9Q1 chr11 58023881 58181616 + protein_coding KNOWN OTTHUMG00000167413.2 157736 2488 4 ENSG00000200817.1 RNU6-899P chr11 58026706 58026812 - snRNA KNOWN NA 107 107 1 ENSG00000279051.2 OR6Q1 chr11 58030930 58031931 + polymorphic_pseudogene KNOWN OTTHUMG00000168831.1 1002 1002 2 ENSG00000172381.4 OR6Q1 chr11 58030953 58031906 + protein_coding KNOWN NA 954 954 1 ENSG00000236541.1 VN2R9P chr11 58040708 58041660 - unitary_pseudogene KNOWN OTTHUMG00000154508.1 953 953 1 ENSG00000255146.1 RP11-659P15.1 chr11 58044110 58060138 - lincRNA NOVEL OTTHUMG00000167391.1 16029 1890 4 ENSG00000254853.1 RP11-659P15.2 chr11 58072378 58075438 - processed_pseudogene KNOWN OTTHUMG00000167402.1 3061 1289 2 ENSG00000255131.2 OR9L1P chr11 58077348 58078603 - unprocessed_pseudogene KNOWN OTTHUMG00000167403.2 1256 933 2 ENSG00000272685.1 OR9I3P chr11 58108720 58109661 - unprocessed_pseudogene KNOWN OTTHUMG00000186071.1 942 942 1 ENSG00000172377.1 OR9I1 chr11 58118500 58119444 - protein_coding KNOWN OTTHUMG00000167404.2 945 945 1 ENSG00000188643.9 S100A16 chr1 153606886 153613145 - protein_coding KNOWN OTTHUMG00000013545.4 6260 1701 15 ENSG00000186508.4 OR9I2P chr11 58144495 58145397 + unprocessed_pseudogene KNOWN OTTHUMG00000154293.1 903 903 1 ENSG00000272569.1 OR5BL1P chr11 58171098 58171721 + unprocessed_pseudogene KNOWN OTTHUMG00000186072.1 624 624 1 ENSG00000186513.2 OR9Q2 chr11 58190434 58191518 + protein_coding KNOWN OTTHUMG00000167414.1 1085 1085 1 ENSG00000197887.3 OR1S2 chr11 58203202 58204181 - protein_coding KNOWN OTTHUMG00000167541.1 980 980 1 ENSG00000172774.7 OR1S1 chr11 58214745 58215722 + protein_coding KNOWN NA 978 978 1 ENSG00000280204.1 OR1S1 chr11 58214745 58215723 + polymorphic_pseudogene KNOWN OTTHUMG00000167463.1 979 979 2 ENSG00000180475.4 OR10Q1 chr11 58227882 58228918 - protein_coding KNOWN OTTHUMG00000167542.1 1037 1037 1 ENSG00000254589.1 EIF4A2P3 chr11 58242043 58243097 - processed_pseudogene KNOWN OTTHUMG00000167464.1 1055 1055 1 ENSG00000172772.3 OR10W1 chr11 58266792 58268260 - protein_coding KNOWN OTTHUMG00000167462.1 1469 1469 1 ENSG00000272900.1 OR10Q2P chr11 58291826 58292765 - unprocessed_pseudogene KNOWN OTTHUMG00000186073.1 940 940 1 ENSG00000189334.7 S100A14 chr1 153614255 153616986 - protein_coding KNOWN OTTHUMG00000035030.3 2732 1277 24 ENSG00000255218.1 OR5BC1P chr11 58317637 58318375 - unprocessed_pseudogene KNOWN OTTHUMG00000167552.1 739 739 1 ENSG00000255431.1 OR5B19P chr11 58343737 58344664 - unprocessed_pseudogene KNOWN OTTHUMG00000167553.1 928 928 1 ENSG00000255096.2 OR5B10P chr11 58348989 58349630 - unprocessed_pseudogene KNOWN OTTHUMG00000167554.2 642 642 1 ENSG00000255333.1 AP000435.3 chr11 58354004 58354499 - processed_pseudogene KNOWN OTTHUMG00000167555.1 496 496 1 ENSG00000197786.3 OR5B17 chr11 58358124 58359069 - protein_coding KNOWN OTTHUMG00000167465.2 946 946 1 ENSG00000233499.1 OR5B1P chr11 58365836 58366763 - unprocessed_pseudogene KNOWN OTTHUMG00000154286.1 928 928 1 ENSG00000273408.1 OR5B15P chr11 58387583 58388486 - unprocessed_pseudogene KNOWN OTTHUMG00000186074.1 904 904 1 ENSG00000172769.2 OR5B3 chr11 58402464 58403409 - protein_coding KNOWN OTTHUMG00000167516.1 946 946 1 ENSG00000172365.2 OR5B2 chr11 58422265 58423313 - protein_coding KNOWN OTTHUMG00000167517.2 1049 1049 1 ENSG00000172362.2 OR5B12 chr11 58439120 58440173 - protein_coding KNOWN OTTHUMG00000167543.1 1054 1054 1 ENSG00000189171.12 S100A13 chr1 153618787 153634092 - protein_coding KNOWN OTTHUMG00000036641.4 15306 2558 27 ENSG00000255299.4 RP11-655C2.3 chr11 58497888 58505758 - lincRNA NOVEL OTTHUMG00000167518.1 7871 1002 10 ENSG00000198283.2 OR5B21 chr11 58507175 58508105 - protein_coding KNOWN OTTHUMG00000167519.1 931 931 1 ENSG00000110031.11 LPXN chr11 58526871 58578220 - protein_coding KNOWN OTTHUMG00000167466.3 51350 2467 40 ENSG00000186660.14 ZFP91 chr11 58579111 58621042 + protein_coding KNOWN OTTHUMG00000137391.4 41932 5220 11 ENSG00000255073.7 ZFP91-CNTF chr11 58579172 58624639 + protein_coding NOVEL OTTHUMG00000166280.2 45468 2417 24 ENSG00000269570.2 CMB9-55A18.1 chr11 58611119 58612642 - antisense NOVEL OTTHUMG00000187460.1 1524 1524 1 ENSG00000242689.2 CNTF chr11 58622673 58625733 + protein_coding KNOWN OTTHUMG00000137476.2 3061 1894 2 ENSG00000280010.1 AP001350.4 chr11 58627435 58628528 + TEC KNOWN OTTHUMG00000173023.1 1094 1094 1 ENSG00000149124.9 GLYAT chr11 58640426 58731974 - protein_coding KNOWN OTTHUMG00000167429.2 91549 3114 27 ENSG00000265783.1 AP000445.3 chr11 58665801 58665893 + miRNA NOVEL NA 93 93 1 ENSG00000271853.4 RP1-178F15.5 chr1 153626332 153634340 - processed_transcript NOVEL OTTHUMG00000185744.1 8009 995 16 ENSG00000197254.4 AP000445.1 chr11 58685086 58691861 + processed_pseudogene KNOWN OTTHUMG00000167219.2 6776 741 4 ENSG00000254926.1 AP000445.2 chr11 58748999 58761053 - unprocessed_pseudogene KNOWN OTTHUMG00000167430.2 12055 783 4 ENSG00000255265.1 TMA16P1 chr11 58796237 58796854 - processed_pseudogene KNOWN OTTHUMG00000167431.1 618 618 1 ENSG00000156689.5 GLYATL2 chr11 58834065 58904215 - protein_coding KNOWN OTTHUMG00000167432.2 70151 1838 18 ENSG00000254717.2 GLYATL1P2 chr11 58878302 58893460 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000167220.2 15159 1161 8 ENSG00000166840.12 GLYATL1 chr11 58905398 59043527 + protein_coding KNOWN OTTHUMG00000167221.4 138130 5440 93 ENSG00000255523.1 RP11-780O24.2 chr11 58917015 58928689 - antisense NOVEL OTTHUMG00000167433.1 11675 643 2 ENSG00000255240.4 RP11-142C4.6 chr11 58933643 59058659 - antisense NOVEL OTTHUMG00000167434.2 125017 3698 14 ENSG00000254877.1 RP11-142C4.4 chr11 58967596 58968291 - processed_pseudogene KNOWN OTTHUMG00000167274.1 696 696 1 ENSG00000255189.1 GLYATL1P1 chr11 58978787 58994120 + unprocessed_pseudogene KNOWN OTTHUMG00000167275.2 15334 1607 4 ENSG00000160678.10 S100A1 chr1 153627926 153632039 + protein_coding KNOWN OTTHUMG00000037041.2 4114 3030 15 ENSG00000254786.1 RP11-142C4.5 chr11 58995439 58999689 - unprocessed_pseudogene KNOWN OTTHUMG00000167276.2 4251 1122 4 ENSG00000254399.2 GLYATL1P4 chr11 59042737 59050971 + unprocessed_pseudogene KNOWN OTTHUMG00000167277.3 8235 906 5 ENSG00000255151.2 GLYATL1P3 chr11 59086307 59094786 + unprocessed_pseudogene KNOWN OTTHUMG00000167278.3 8480 909 5 ENSG00000189057.9 FAM111B chr11 59107185 59127410 + protein_coding KNOWN OTTHUMG00000167279.2 20226 3863 16 ENSG00000245571.5 AP001258.4 chr11 59130133 59143015 - lincRNA NOVEL OTTHUMG00000167435.1 12883 2645 13 ENSG00000255381.1 AP001258.5 chr11 59142121 59142610 - processed_pseudogene KNOWN OTTHUMG00000167436.1 490 490 1 ENSG00000166801.14 FAM111A chr11 59142748 59155039 + protein_coding KNOWN OTTHUMG00000167280.5 12292 7221 38 ENSG00000110042.6 DTX4 chr11 59171430 59208587 + protein_coding KNOWN OTTHUMG00000167336.1 37158 6072 26 ENSG00000197629.5 MPEG1 chr11 59208510 59212951 - protein_coding KNOWN OTTHUMG00000162676.1 4442 4442 1 ENSG00000263999.2 RN7SL42P chr11 59214406 59214699 - misc_RNA KNOWN NA 294 294 1 ENSG00000272030.1 RP1-178F15.4 chr1 153631438 153634397 - antisense NOVEL OTTHUMG00000185745.1 2960 1054 7 ENSG00000225802.3 WARSP1 chr11 59255360 59259486 + unprocessed_pseudogene KNOWN OTTHUMG00000167476.1 4127 454 3 ENSG00000254799.1 SLC25A47P1 chr11 59263389 59263802 - processed_pseudogene KNOWN OTTHUMG00000167415.1 414 414 1 ENSG00000214797.3 RP11-1036E20.9 chr11 59268876 59284033 - lincRNA NOVEL OTTHUMG00000167437.1 15158 2805 2 ENSG00000254704.3 RP11-1036E20.7 chr11 59287339 59289486 - processed_pseudogene KNOWN OTTHUMG00000167416.4 2148 2148 1 ENSG00000263944.2 RN7SL435P chr11 59291052 59291333 - misc_RNA KNOWN NA 282 282 1 ENSG00000235678.3 OR5AN2P chr11 59309681 59310576 - unprocessed_pseudogene KNOWN OTTHUMG00000167417.1 896 896 1 ENSG00000255386.1 OR5BR1P chr11 59332757 59334086 - unprocessed_pseudogene KNOWN OTTHUMG00000167418.1 1330 1330 1 ENSG00000176495.2 OR5AN1 chr11 59364412 59365448 + protein_coding KNOWN OTTHUMG00000167337.1 1037 1037 1 ENSG00000198261.3 OR5BB1P chr11 59391354 59392292 - unprocessed_pseudogene KNOWN OTTHUMG00000167338.1 939 939 1 ENSG00000172324.4 OR5A2 chr11 59421943 59422976 - protein_coding KNOWN OTTHUMG00000167419.1 1034 1034 1 ENSG00000160679.11 CHTOP chr1 153633982 153646306 + protein_coding KNOWN OTTHUMG00000037052.1 12325 5625 30 ENSG00000172320.2 OR5A1 chr11 59443144 59444194 + protein_coding KNOWN OTTHUMG00000167339.1 1051 1051 1 ENSG00000166884.2 OR4D6 chr11 59456938 59457991 + protein_coding KNOWN OTTHUMG00000167340.1 1054 1054 1 ENSG00000254640.1 RP11-384C21.9 chr11 59468244 59468657 + processed_pseudogene KNOWN OTTHUMG00000167420.1 414 414 1 ENSG00000254466.1 OR4D10 chr11 59477373 59478396 + protein_coding KNOWN OTTHUMG00000167341.1 1024 1024 1 ENSG00000204989.3 OR4D8P chr11 59491652 59492581 + unprocessed_pseudogene KNOWN OTTHUMG00000154282.1 930 930 1 ENSG00000176200.1 OR4D11 chr11 59503576 59504511 + protein_coding KNOWN OTTHUMG00000167342.1 936 936 1 ENSG00000172742.4 OR4D9 chr11 59514913 59515857 + protein_coding KNOWN OTTHUMG00000167343.1 945 945 1 ENSG00000254770.1 OR4D7P chr11 59531754 59532695 + unprocessed_pseudogene KNOWN OTTHUMG00000167344.1 942 942 1 ENSG00000255008.2 AP000442.4 chr11 59561146 59566074 - lincRNA NOVEL OTTHUMG00000167421.2 4929 769 6 ENSG00000110048.10 OSBP chr11 59574398 59616144 - protein_coding KNOWN OTTHUMG00000167422.2 41747 5492 23 ENSG00000143553.9 SNAPIN chr1 153658654 153661830 + protein_coding KNOWN OTTHUMG00000037086.1 3177 1544 12 ENSG00000264559.1 MIR3162 chr11 59595077 59595158 - miRNA KNOWN NA 82 82 1 ENSG00000255139.1 AP000442.1 chr11 59616429 59639861 + antisense NOVEL OTTHUMG00000167345.1 23433 760 6 ENSG00000166889.13 PATL1 chr11 59636716 59668980 - protein_coding KNOWN OTTHUMG00000167423.2 32265 4278 21 ENSG00000255355.1 AP000640.2 chr11 59669312 59676041 + processed_transcript NOVEL OTTHUMG00000167349.1 6730 914 4 ENSG00000223223.1 RN7SKP192 chr11 59706057 59706383 - misc_RNA KNOWN NA 327 327 1 ENSG00000172289.2 OR10V1 chr11 59712823 59713864 - protein_coding KNOWN OTTHUMG00000167406.1 1042 1042 1 ENSG00000166900.13 STX3 chr11 59713456 59802706 + protein_coding KNOWN OTTHUMG00000167353.2 89251 4449 57 ENSG00000254403.1 OR10Y1P chr11 59728519 59729492 + unprocessed_pseudogene KNOWN OTTHUMG00000167350.1 974 974 1 ENSG00000254743.1 OR10V3P chr11 59741325 59742049 + unprocessed_pseudogene KNOWN OTTHUMG00000167351.1 725 725 1 ENSG00000255538.1 OR10V2P chr11 59748811 59749574 + unprocessed_pseudogene KNOWN OTTHUMG00000167352.1 764 764 1 ENSG00000143621.15 ILF2 chr1 153661788 153671048 - protein_coding KNOWN OTTHUMG00000037087.1 9261 2281 45 ENSG00000254477.1 AP000640.10 chr11 59753015 59754975 - antisense NOVEL OTTHUMG00000167407.1 1961 879 2 ENSG00000234964.4 FABP5P7 chr11 59781318 59781722 - processed_pseudogene KNOWN OTTHUMG00000167408.2 405 405 1 ENSG00000166902.4 MRPL16 chr11 59806135 59810872 - protein_coding KNOWN OTTHUMG00000167410.2 4738 2271 13 ENSG00000134812.6 GIF chr11 59829268 59845501 - protein_coding KNOWN OTTHUMG00000167399.1 16234 2409 26 ENSG00000134827.6 TCN1 chr11 59852800 59866575 - protein_coding KNOWN OTTHUMG00000167400.1 13776 1586 25 ENSG00000270929.1 SRD5A3P1 chr11 59898185 59899133 + processed_pseudogene KNOWN OTTHUMG00000184761.1 949 949 1 ENSG00000214788.2 OOSP1 chr11 59938455 59995845 + unitary_pseudogene KNOWN OTTHUMG00000187492.1 57391 1270 10 ENSG00000255393.1 RP11-736I10.1 chr11 60024908 60031077 + lincRNA NOVEL OTTHUMG00000167378.1 6170 522 3 ENSG00000149507.5 OOSP2 chr11 60040275 60048044 + protein_coding KNOWN OTTHUMG00000167379.2 7770 1897 10 ENSG00000149516.12 MS4A3 chr11 60056587 60071128 + protein_coding KNOWN OTTHUMG00000167380.1 14542 2095 37 ENSG00000271264.1 MZT1P1 chr1 9780822 9781240 + processed_pseudogene KNOWN OTTHUMG00000184268.1 419 246 2 ENSG00000169418.9 NPR1 chr1 153678637 153693992 + protein_coding KNOWN OTTHUMG00000037085.3 15356 5003 30 ENSG00000255331.1 RP11-736I10.2 chr11 60077350 60078401 + processed_pseudogene KNOWN OTTHUMG00000167381.1 1052 737 2 ENSG00000149534.7 MS4A2 chr11 60088261 60098466 + protein_coding KNOWN OTTHUMG00000167239.1 10206 4453 21 ENSG00000254952.1 AP001257.1 chr11 60159687 60160822 - lincRNA NOVEL OTTHUMG00000167240.1 1136 385 3 ENSG00000110077.13 MS4A6A chr11 60172014 60184666 - protein_coding KNOWN OTTHUMG00000167241.2 12653 5791 94 ENSG00000214787.7 MS4A4E chr11 60201253 60243088 - protein_coding KNOWN OTTHUMG00000167354.2 41836 1558 33 ENSG00000275344.1 MIR6503 chr11 60209071 60209156 - miRNA KNOWN NA 86 86 1 ENSG00000110079.15 MS4A4A chr11 60280541 60308972 + protein_coding KNOWN OTTHUMG00000154949.2 28432 2508 36 ENSG00000166926.7 MS4A6E chr11 60334831 60396596 + protein_coding KNOWN OTTHUMG00000167355.1 61766 1057 13 ENSG00000166927.11 MS4A7 chr11 60378482 60395951 + protein_coding KNOWN OTTHUMG00000167356.3 17470 4348 50 ENSG00000166928.9 MS4A14 chr11 60378530 60417756 + protein_coding KNOWN OTTHUMG00000167357.3 39227 4006 51 ENSG00000274940.1 MIR8083 chr1 153689705 153689793 - miRNA KNOWN NA 89 89 1 ENSG00000166930.5 MS4A5 chr11 60429589 60455214 + protein_coding KNOWN OTTHUMG00000167613.1 25626 897 27 ENSG00000156738.16 MS4A1 chr11 60455752 60470760 + protein_coding KNOWN OTTHUMG00000167614.1 15009 4872 60 ENSG00000071203.8 MS4A12 chr11 60492778 60507430 + protein_coding KNOWN OTTHUMG00000165364.1 14653 1839 24 ENSG00000204979.6 MS4A13 chr11 60515413 60542721 + protein_coding KNOWN OTTHUMG00000167615.1 27309 1289 21 ENSG00000181995.10 LINC00301 chr11 60615736 60687149 + lincRNA NOVEL OTTHUMG00000141269.2 71414 1289 21 ENSG00000166959.6 MS4A8 chr11 60699574 60715811 + protein_coding KNOWN OTTHUMG00000167686.1 16238 2583 45 ENSG00000214782.6 MS4A18 chr11 60729304 60744212 + protein_coding KNOWN OTTHUMG00000167687.2 14909 1433 12 ENSG00000166961.13 MS4A15 chr11 60756953 60776732 + protein_coding KNOWN OTTHUMG00000167688.1 19780 2195 27 ENSG00000172689.1 MS4A10 chr11 60785348 60801305 + protein_coding KNOWN OTTHUMG00000167689.1 15958 2296 8 ENSG00000255845.1 RP11-804A23.1 chr11 60813932 60821739 - antisense NOVEL OTTHUMG00000167703.1 7808 355 3 ENSG00000242565.3 RN7SL372P chr1 153704088 153704385 + misc_RNA KNOWN NA 298 298 1 ENSG00000255959.1 RP11-804A23.2 chr11 60835996 60842965 - antisense NOVEL OTTHUMG00000167704.1 6970 501 2 ENSG00000256813.1 RP11-804A23.4 chr11 60841806 60851081 - antisense NOVEL OTTHUMG00000167705.1 9276 491 2 ENSG00000110104.10 CCDC86 chr11 60842071 60851081 + protein_coding KNOWN OTTHUMG00000167706.2 9011 2044 13 ENSG00000183134.4 PTGDR2 chr11 60850940 60855971 - protein_coding KNOWN OTTHUMG00000167796.1 5032 2895 2 ENSG00000149506.9 ZP1 chr11 60867562 60875693 + protein_coding KNOWN OTTHUMG00000167797.2 8132 2436 39 ENSG00000110107.7 PRPF19 chr11 60890730 60906588 - protein_coding KNOWN OTTHUMG00000167798.1 15859 2739 49 ENSG00000257052.1 RP11-881M11.2 chr11 60906789 60909742 + antisense NOVEL OTTHUMG00000167799.1 2954 810 2 ENSG00000256944.1 RP11-881M11.1 chr11 60913166 60914052 - antisense NOVEL OTTHUMG00000167800.1 887 405 2 ENSG00000110108.8 TMEM109 chr11 60913874 60923443 + protein_coding KNOWN OTTHUMG00000167801.1 9570 2421 9 ENSG00000256196.1 RP11-881M11.4 chr11 60918469 60925397 - antisense NOVEL OTTHUMG00000167802.1 6929 864 2 ENSG00000235015.1 GEMIN2P1 chr1 153717303 153718347 - processed_pseudogene KNOWN OTTHUMG00000037088.1 1045 752 2 ENSG00000006118.13 TMEM132A chr11 60924463 60937159 + protein_coding KNOWN OTTHUMG00000167803.1 12697 7271 61 ENSG00000110446.8 SLC15A3 chr11 60937083 60952530 - protein_coding KNOWN OTTHUMG00000167804.3 15448 6119 55 ENSG00000013725.13 CD6 chr11 60971680 61020377 + protein_coding KNOWN OTTHUMG00000167823.1 48698 5958 87 ENSG00000207153.1 RNU6-933P chr11 60985061 60985167 - snRNA KNOWN NA 107 107 1 ENSG00000256733.1 RP11-881M11.8 chr11 61055737 61067535 + lincRNA NOVEL OTTHUMG00000167824.1 11799 452 4 ENSG00000110448.9 CD5 chr11 61102395 61127852 + protein_coding KNOWN OTTHUMG00000167825.2 25458 3221 16 ENSG00000167987.9 VPS37C chr11 61130256 61161617 - protein_coding KNOWN OTTHUMG00000167826.1 31362 3960 16 ENSG00000279549.1 AP000437.3 chr11 61143380 61145464 - TEC KNOWN OTTHUMG00000168262.1 2085 2085 1 ENSG00000229859.7 PGA3 chr11 61203307 61213098 + protein_coding KNOWN OTTHUMG00000168071.2 9792 5039 39 ENSG00000229183.7 PGA4 chr11 61222216 61231927 + protein_coding KNOWN OTTHUMG00000168073.2 9712 5148 31 ENSG00000199565.1 Y_RNA chr1 153726252 153726353 - misc_RNA NOVEL NA 102 102 1 ENSG00000256220.1 CTD-2331C18.5 chr11 61227168 61248533 + processed_transcript PUTATIVE OTTHUMG00000168074.1 21366 267 2 ENSG00000256713.6 PGA5 chr11 61241042 61251448 + protein_coding KNOWN OTTHUMG00000168075.3 10407 2913 24 ENSG00000167992.11 VWCE chr11 61258286 61295424 - protein_coding KNOWN OTTHUMG00000168208.3 37139 4874 90 ENSG00000167986.12 DDB1 chr11 61299451 61342596 - protein_coding KNOWN OTTHUMG00000168209.2 43146 13950 179 ENSG00000149476.13 DAK chr11 61333210 61353295 + protein_coding KNOWN OTTHUMG00000168076.4 20086 8215 120 ENSG00000162144.8 CYB561A3 chr11 61348745 61362299 - protein_coding KNOWN OTTHUMG00000157187.6 13555 10597 95 ENSG00000279246.1 RP11-286N22.14 chr11 61352244 61354477 + TEC KNOWN OTTHUMG00000168278.1 2234 2234 1 ENSG00000149483.10 TMEM138 chr11 61362001 61369509 + protein_coding KNOWN OTTHUMG00000168145.3 7509 6348 42 ENSG00000187049.8 TMEM216 chr11 61391687 61398863 + protein_coding KNOWN OTTHUMG00000168146.5 7177 2364 22 ENSG00000149532.14 CPSF7 chr11 61402641 61430031 - protein_coding KNOWN OTTHUMG00000168198.4 27391 6036 151 ENSG00000143624.12 INTS3 chr1 153728067 153774808 + protein_coding KNOWN OTTHUMG00000037089.5 46742 10450 186 ENSG00000279632.1 RP11-286N22.6 chr11 61426448 61427325 - TEC KNOWN OTTHUMG00000168147.1 878 878 1 ENSG00000256591.4 RP11-286N22.8 chr11 61429220 61485822 + protein_coding NOVEL OTTHUMG00000168148.4 56603 7522 38 ENSG00000167985.5 SDHAF2 chr11 61430042 61447529 + protein_coding KNOWN OTTHUMG00000168279.2 17488 2492 31 ENSG00000240823.3 RN7SL23P chr11 61444149 61444423 + misc_RNA KNOWN NA 275 275 1 ENSG00000162148.9 PPP1R32 chr11 61481120 61490931 + protein_coding KNOWN OTTHUMG00000168176.2 9812 2400 47 ENSG00000255931.1 RP11-286N22.10 chr11 61496440 61500076 + lincRNA NOVEL OTTHUMG00000168177.1 3637 554 2 ENSG00000266006.1 MIR4488 chr11 61508596 61508657 + miRNA KNOWN NA 62 62 1 ENSG00000204950.3 LRRC10B chr11 61508800 61511018 + protein_coding KNOWN OTTHUMG00000168178.1 2219 2219 1 ENSG00000011347.8 SYT7 chr11 61515313 61581148 - protein_coding KNOWN OTTHUMG00000168199.1 65836 5953 102 ENSG00000279878.1 RP11-286N22.16 chr11 61525708 61526602 - TEC KNOWN OTTHUMG00000168281.1 895 895 1 ENSG00000243613.1 RP11-216N14.8 chr1 153746851 153751227 - antisense NOVEL OTTHUMG00000041238.1 4377 235 2 ENSG00000256443.1 RP11-794G24.1 chr11 61539516 61542259 - lincRNA NOVEL OTTHUMG00000168200.1 2744 1831 2 ENSG00000250230.2 RP11-855O10.2 chr11 61588494 61607550 + lincRNA NOVEL OTTHUMG00000168159.1 19057 2349 4 ENSG00000243742.4 RPLP0P2 chr11 61615036 61639449 + transcribed_processed_pseudogene KNOWN OTTHUMG00000158396.1 24414 3909 18 ENSG00000255947.1 RP11-855O10.3 chr11 61654665 61655702 - lincRNA NOVEL OTTHUMG00000168169.1 1038 462 2 ENSG00000134780.8 DAGLA chr11 61680433 61747001 + protein_coding KNOWN OTTHUMG00000168160.1 66569 5757 40 ENSG00000124915.9 DKFZP434K028 chr11 61746493 61757655 - lincRNA NOVEL OTTHUMG00000168170.1 11163 2889 13 ENSG00000124920.12 MYRF chr11 61752642 61788518 + protein_coding KNOWN OTTHUMG00000168161.2 35877 10680 89 ENSG00000134825.12 TMEM258 chr11 61768501 61792802 - protein_coding KNOWN OTTHUMG00000168172.1 24302 3068 30 ENSG00000207601.1 MIR611 chr11 61792495 61792561 - miRNA KNOWN NA 67 67 1 ENSG00000168496.3 FEN1 chr11 61792637 61797244 + protein_coding KNOWN OTTHUMG00000168162.2 4608 2478 6 ENSG00000233222.2 RP11-216N14.9 chr1 153750983 153752176 - antisense NOVEL OTTHUMG00000041239.1 1194 316 2 ENSG00000134824.12 FADS2 chr11 61792980 61867354 + protein_coding KNOWN OTTHUMG00000163794.3 74375 11026 92 ENSG00000149485.15 FADS1 chr11 61799625 61829318 - protein_coding KNOWN OTTHUMG00000157155.5 29694 10230 115 ENSG00000222326.1 MIR1908 chr11 61815161 61815240 - miRNA KNOWN NA 80 80 1 ENSG00000221968.7 FADS3 chr11 61873519 61892051 - protein_coding KNOWN OTTHUMG00000167500.3 18533 6283 99 ENSG00000277892.1 MIR6746 chr11 61878216 61878278 - miRNA KNOWN NA 63 63 1 ENSG00000167994.10 RAB3IL1 chr11 61897301 61920269 - protein_coding KNOWN OTTHUMG00000167524.1 22969 3006 31 ENSG00000200898.1 RNU6-1243P chr11 61937894 61938000 + snRNA KNOWN NA 107 107 1 ENSG00000167995.14 BEST1 chr11 61949821 61965515 + protein_coding KNOWN OTTHUMG00000167469.3 15695 8930 62 ENSG00000167996.14 FTH1 chr11 61959718 61967660 - protein_coding KNOWN OTTHUMG00000166217.4 7943 2030 42 ENSG00000279491.1 RP11-810P12.7 chr11 61967794 61969490 + TEC KNOWN OTTHUMG00000187461.1 1697 1697 1 ENSG00000279767.1 AL513523.2 chr1 153772371 153774079 - protein_coding KNOWN NA 1709 1186 4 ENSG00000280642.1 Metazoa_SRP chr11 61974378 61974632 + misc_RNA NOVEL NA 255 255 1 ENSG00000244176.1 RP11-810P12.1 chr11 62011751 62012602 - processed_pseudogene KNOWN OTTHUMG00000158398.1 852 852 1 ENSG00000254424.1 RP11-810P12.6 chr11 62072882 62073052 - processed_pseudogene KNOWN OTTHUMG00000167501.1 171 171 1 ENSG00000255553.1 RP11-810P12.5 chr11 62077277 62082184 - lincRNA NOVEL OTTHUMG00000167502.1 4908 788 2 ENSG00000149503.11 INCENP chr11 62123973 62153163 + protein_coding KNOWN OTTHUMG00000167470.3 29191 4473 56 ENSG00000236607.3 EEF1DP8 chr11 62169293 62169828 + processed_pseudogene KNOWN OTTHUMG00000167503.1 536 536 1 ENSG00000168515.3 SCGB1D1 chr11 62190216 62193539 + protein_coding KNOWN OTTHUMG00000167505.1 3324 453 3 ENSG00000124939.5 SCGB2A1 chr11 62208668 62213939 + protein_coding KNOWN OTTHUMG00000167506.2 5272 521 3 ENSG00000254404.1 RP11-703H8.9 chr11 62213427 62260549 - antisense NOVEL OTTHUMG00000167507.1 47123 353 3 ENSG00000124935.3 SCGB1D2 chr11 62242210 62244808 + protein_coding KNOWN OTTHUMG00000167508.1 2599 480 3 ENSG00000143554.12 SLC27A3 chr1 153774354 153780157 + protein_coding KNOWN OTTHUMG00000037155.4 5804 5470 80 ENSG00000110484.6 SCGB2A2 chr11 62270155 62273156 + protein_coding KNOWN OTTHUMG00000167509.1 3002 1508 5 ENSG00000197745.2 SCGB1D4 chr11 62296277 62299064 - protein_coding KNOWN OTTHUMG00000167510.2 2788 439 3 ENSG00000255213.1 NPM1P35 chr11 62330946 62331813 + processed_pseudogene KNOWN OTTHUMG00000167511.1 868 868 1 ENSG00000255118.1 RP11-703H8.7 chr11 62336911 62338090 - antisense NOVEL OTTHUMG00000167512.1 1180 485 2 ENSG00000162174.11 ASRGL1 chr11 62337448 62393412 + protein_coding KNOWN OTTHUMG00000167513.3 55965 4586 44 ENSG00000254454.2 RCC2P6 chr11 62371146 62373168 + processed_pseudogene KNOWN OTTHUMG00000167514.2 2023 1557 3 ENSG00000265696.1 AP003064.2 chr11 62372656 62372719 + miRNA NOVEL NA 64 64 1 ENSG00000255126.1 CTD-2531D15.5 chr11 62391516 62393372 - antisense NOVEL OTTHUMG00000167525.1 1857 590 2 ENSG00000149021.5 SCGB1A1 chr11 62405103 62423195 + protein_coding KNOWN OTTHUMG00000167526.2 18093 582 7 ENSG00000255446.1 CTD-2531D15.4 chr11 62421845 62426724 - antisense NOVEL OTTHUMG00000167527.1 4880 510 2 ENSG00000250575.1 RP4-669L17.8 chr1 491225 493241 - unprocessed_pseudogene KNOWN OTTHUMG00000002861.2 2017 1239 2 ENSG00000280113.1 AL357140.1 chr1 9827610 9828258 - protein_coding KNOWN NA 649 649 1 ENSG00000207039.1 Y_RNA chr1 153785720 153785821 - misc_RNA NOVEL NA 102 102 1 ENSG00000124942.12 AHNAK chr11 62433542 62556235 - protein_coding KNOWN OTTHUMG00000167558.5 122694 19465 37 ENSG00000238861.1 AP003064.1 chr11 62463635 62463724 + miRNA NOVEL NA 90 90 1 ENSG00000250659.2 RP11-864I4.3 chr11 62537312 62542018 + antisense NOVEL OTTHUMG00000167718.1 4707 264 2 ENSG00000257058.1 RP11-864I4.4 chr11 62545999 62547699 + antisense NOVEL OTTHUMG00000167749.1 1701 391 2 ENSG00000254772.8 EEF1G chr11 62559601 62574086 - protein_coding KNOWN OTTHUMG00000167567.1 14486 2716 29 ENSG00000255508.6 RP11-864I4.1 chr11 62559603 62591531 - protein_coding NOVEL OTTHUMG00000167559.2 31929 5197 33 ENSG00000276102.1 MIR6747 chr11 62567011 62567071 - miRNA KNOWN NA 61 61 1 ENSG00000149016.14 TUT1 chr11 62575045 62592177 - protein_coding KNOWN OTTHUMG00000158564.3 17133 4082 34 ENSG00000149480.5 MTA2 chr11 62593214 62601840 - protein_coding KNOWN OTTHUMG00000167684.1 8627 4236 65 ENSG00000149499.10 EML3 chr11 62602218 62612765 - protein_coding KNOWN OTTHUMG00000149817.8 10548 5490 193 ENSG00000231827.2 RP11-216N14.5 chr1 153795173 153802091 + unprocessed_pseudogene KNOWN OTTHUMG00000037161.1 6919 2040 11 ENSG00000254964.1 RP11-831H9.3 chr11 62606161 62606405 + antisense NOVEL OTTHUMG00000167544.1 245 92 2 ENSG00000149489.7 ROM1 chr11 62611722 62615120 + protein_coding KNOWN OTTHUMG00000167528.2 3399 2495 13 ENSG00000149541.8 B3GAT3 chr11 62615296 62622175 - protein_coding KNOWN OTTHUMG00000167685.1 6880 2428 27 ENSG00000089597.15 GANAB chr11 62624826 62646726 - protein_coding KNOWN OTTHUMG00000167696.3 21901 5027 166 ENSG00000185085.2 INTS5 chr11 62646848 62653302 - protein_coding KNOWN OTTHUMG00000167605.1 6455 3285 2 ENSG00000255432.1 RP11-831H9.11 chr11 62649694 62665178 - protein_coding PUTATIVE OTTHUMG00000167606.1 15485 577 4 ENSG00000278615.3 C11orf98 chr11 62662816 62665217 - protein_coding KNOWN OTTHUMG00000167588.6 2402 887 10 ENSG00000162194.11 LBHD1 chr11 62662817 62672255 - protein_coding KNOWN OTTHUMG00000187541.3 9439 3362 42 ENSG00000214756.6 METTL12 chr11 62665309 62668496 + protein_coding KNOWN OTTHUMG00000167545.2 3188 3185 9 ENSG00000206597.1 SNORA57 chr11 62665422 62665570 + snoRNA KNOWN NA 149 149 1 ENSG00000143614.7 GATAD2B chr1 153804725 153922975 - protein_coding KNOWN OTTHUMG00000037162.1 118251 7478 11 ENSG00000204922.4 UQCC3 chr11 62670273 62673687 + protein_coding KNOWN OTTHUMG00000167546.2 3415 2398 5 ENSG00000162191.12 UBXN1 chr11 62676498 62679117 - protein_coding KNOWN OTTHUMG00000167580.1 2620 2532 111 ENSG00000177363.4 LRRN4CL chr11 62686402 62689899 - protein_coding KNOWN OTTHUMG00000167581.1 3498 2585 2 ENSG00000234857.2 HNRNPUL2-BSCL2 chr11 62690275 62727384 - protein_coding NOVEL OTTHUMG00000167772.1 37110 4001 24 ENSG00000168000.13 BSCL2 chr11 62690275 62709845 - protein_coding KNOWN OTTHUMG00000150624.5 19571 3965 153 ENSG00000162188.5 GNG3 chr11 62707658 62709201 + protein_coding KNOWN OTTHUMG00000167560.1 1544 882 3 ENSG00000214753.2 HNRNPUL2 chr11 62712630 62727349 - protein_coding KNOWN OTTHUMG00000167773.2 14720 5293 16 ENSG00000162222.12 TTC9C chr11 62728069 62740293 + protein_coding KNOWN OTTHUMG00000167607.2 12225 2657 18 ENSG00000185670.7 ZBTB3 chr11 62748319 62754188 - protein_coding KNOWN OTTHUMG00000167608.2 5870 3348 6 ENSG00000168002.10 POLR2G chr11 62761544 62766710 + protein_coding KNOWN OTTHUMG00000167609.1 5167 1923 55 ENSG00000223599.1 RP11-216N14.7 chr1 153852106 153853414 - processed_pseudogene KNOWN OTTHUMG00000037163.1 1309 1309 1 ENSG00000267811.1 RP11-727F15.11 chr11 62771120 62771606 - antisense NOVEL OTTHUMG00000183001.1 487 487 1 ENSG00000162227.6 TAF6L chr11 62771303 62787342 + protein_coding KNOWN OTTHUMG00000167610.1 16040 3149 42 ENSG00000168569.7 TMEM223 chr11 62771629 62792021 - protein_coding KNOWN OTTHUMG00000167693.1 20393 2280 11 ENSG00000269176.2 RP11-727F15.12 chr11 62786023 62786785 - antisense NOVEL OTTHUMG00000183002.2 763 763 1 ENSG00000185475.7 TMEM179B chr11 62787415 62790405 + protein_coding KNOWN OTTHUMG00000167611.3 2991 1496 18 ENSG00000274856.1 MIR6748 chr11 62789815 62789885 + miRNA KNOWN NA 71 71 1 ENSG00000162231.12 NXF1 chr11 62792123 62806302 - protein_coding KNOWN OTTHUMG00000167612.6 14180 6194 147 ENSG00000274066.1 MIR6514 chr11 62792702 62792771 - miRNA KNOWN NA 70 70 1 ENSG00000162236.10 STX5 chr11 62806897 62832088 - protein_coding KNOWN OTTHUMG00000143864.2 25192 2257 70 ENSG00000269463.1 RP11-727F15.13 chr11 62807682 62808063 - sense_intronic NOVEL OTTHUMG00000183003.1 382 382 1 ENSG00000236327.2 RP11-759F5.1 chr1 153890595 153890865 + processed_pseudogene KNOWN OTTHUMG00000037154.2 271 271 1 ENSG00000252361.1 RNU6-118P chr11 62815966 62816067 - snRNA KNOWN NA 102 102 1 ENSG00000256690.1 RP11-727F15.9 chr11 62832234 62834043 + antisense NOVEL OTTHUMG00000167742.1 1810 765 4 ENSG00000133316.14 WDR74 chr11 62832342 62841809 - protein_coding KNOWN OTTHUMG00000167695.3 9468 4247 110 ENSG00000222328.1 RNU2-2P chr11 62841619 62841809 - snRNA KNOWN NA 191 191 1 ENSG00000255717.5 SNHG1 chr11 62851988 62855914 - processed_transcript KNOWN OTTHUMG00000167743.1 3927 3756 166 ENSG00000277194.1 SNORD22 chr11 62852910 62853035 - snoRNA KNOWN NA 126 126 1 ENSG00000277846.1 SNORD30 chr11 62853663 62853732 - snoRNA KNOWN NA 70 70 1 ENSG00000278527.1 SNORD22 chr11 62854161 62854285 - snoRNA NOVEL NA 125 125 1 ENSG00000274544.1 SNORD28 chr11 62854621 62854695 - snoRNA KNOWN NA 75 75 1 ENSG00000275996.1 SNORD27 chr11 62855012 62855083 - snoRNA KNOWN NA 72 72 1 ENSG00000198837.8 DENND4B chr1 153929501 153946696 - protein_coding KNOWN OTTHUMG00000037157.3 17196 7584 82 ENSG00000276788.1 SNORD26 chr11 62855292 62855366 - snoRNA KNOWN NA 75 75 1 ENSG00000275043.1 SNORD25 chr11 62855564 62855632 - snoRNA KNOWN NA 69 69 1 ENSG00000168003.15 SLC3A2 chr11 62856102 62888875 + protein_coding KNOWN OTTHUMG00000074091.6 32774 5178 141 ENSG00000168539.3 CHRM1 chr11 62908679 62921807 - protein_coding KNOWN OTTHUMG00000167765.1 13129 3250 7 ENSG00000257002.1 AP000438.2 chr11 62909546 62918361 + antisense NOVEL OTTHUMG00000167766.1 8816 749 3 ENSG00000241082.3 RN7SL259P chr11 62935982 62936234 - misc_RNA KNOWN NA 253 253 1 ENSG00000197901.10 SLC22A6 chr11 62936385 62984983 - protein_coding KNOWN OTTHUMG00000167767.1 48599 2407 56 ENSG00000149452.14 SLC22A8 chr11 62989154 63015839 - protein_coding KNOWN OTTHUMG00000167768.1 26686 8531 67 ENSG00000256041.1 RP11-959F10.4 chr11 63032503 63033103 - processed_pseudogene KNOWN OTTHUMG00000167769.1 601 601 1 ENSG00000253547.2 RP11-959F10.5 chr11 63046785 63048126 + processed_pseudogene KNOWN OTTHUMG00000167770.1 1342 1342 1 ENSG00000160741.15 CRTC2 chr1 153947669 153958625 - protein_coding KNOWN OTTHUMG00000037156.4 10957 3612 71 ENSG00000197658.8 SLC22A24 chr11 63079940 63144221 - protein_coding KNOWN OTTHUMG00000165372.2 64282 2492 24 ENSG00000239924.1 RPL29P22 chr11 63115880 63116338 - processed_pseudogene KNOWN OTTHUMG00000158399.2 459 459 1 ENSG00000184999.10 SLC22A10 chr11 63137867 63369718 + protein_coding KNOWN OTTHUMG00000165197.3 231852 3200 46 ENSG00000196600.11 SLC22A25 chr11 63163776 63229652 - protein_coding KNOWN OTTHUMG00000165340.5 65877 3752 37 ENSG00000256863.1 RP11-959F10.6 chr11 63237957 63239114 - unprocessed_pseudogene KNOWN OTTHUMG00000167777.1 1158 448 2 ENSG00000256847.1 CCND2P1 chr11 63243085 63244004 + processed_pseudogene KNOWN OTTHUMG00000167849.1 920 799 2 ENSG00000256181.1 AP000438.4 chr11 63265836 63266256 - unprocessed_pseudogene KNOWN OTTHUMG00000167778.1 421 421 1 ENSG00000149742.8 SLC22A9 chr11 63369789 63410294 + protein_coding KNOWN OTTHUMG00000167805.1 40506 2362 17 ENSG00000168004.8 HRASLS5 chr11 63461404 63491194 - protein_coding KNOWN OTTHUMG00000167806.1 29791 3268 30 ENSG00000275598.1 CMB9-14B22.1 chr11 63469376 63470944 + processed_pseudogene KNOWN OTTHUMG00000187767.1 1569 1252 2 ENSG00000143570.16 SLC39A1 chr1 153959099 153968184 - protein_coding KNOWN OTTHUMG00000037158.2 9086 3388 44 ENSG00000133317.13 LGALS12 chr11 63506084 63516774 + protein_coding KNOWN OTTHUMG00000167807.2 10691 2270 41 ENSG00000133321.9 RARRES3 chr11 63536809 63546462 + protein_coding KNOWN OTTHUMG00000167850.2 9654 1299 17 ENSG00000133328.3 HRASLS2 chr11 63552770 63563383 - protein_coding KNOWN OTTHUMG00000167851.1 10614 742 4 ENSG00000176485.9 PLA2G16 chr11 63573195 63616883 - protein_coding KNOWN OTTHUMG00000167852.1 43689 3104 18 ENSG00000203520.3 RP11-697H9.3 chr11 63616308 63621671 + antisense NOVEL OTTHUMG00000167853.1 5364 573 2 ENSG00000184743.11 ATL3 chr11 63624087 63671921 - protein_coding KNOWN OTTHUMG00000167854.1 47835 7600 33 ENSG00000270269.1 IMMP1LP1 chr11 63632233 63632720 + processed_pseudogene KNOWN OTTHUMG00000184758.1 488 488 1 ENSG00000256789.1 RP11-697H9.2 chr11 63637677 63658962 + antisense NOVEL OTTHUMG00000167855.1 21286 423 3 ENSG00000133318.12 RTN3 chr11 63681446 63759891 + protein_coding KNOWN OTTHUMG00000168056.2 78446 5792 71 ENSG00000271100.1 RP11-697H9.5 chr11 63698596 63698764 - processed_pseudogene KNOWN OTTHUMG00000184819.1 169 169 1 ENSG00000276584.1 MIR6737 chr1 153962351 153962420 - miRNA KNOWN NA 70 70 1 ENSG00000188070.9 C11orf95 chr11 63759892 63768775 - protein_coding KNOWN OTTHUMG00000167840.3 8884 5948 13 ENSG00000264519.2 RN7SL596P chr11 63797784 63798071 - misc_RNA KNOWN NA 288 288 1 ENSG00000168005.7 C11orf84 chr11 63813388 63827718 + protein_coding KNOWN OTTHUMG00000167746.1 14331 2807 12 ENSG00000256280.1 RP11-466C23.5 chr11 63834667 63834943 - processed_pseudogene KNOWN OTTHUMG00000167842.1 277 277 1 ENSG00000072518.19 MARK2 chr11 63838928 63911019 + protein_coding KNOWN OTTHUMG00000160504.6 72092 6154 196 ENSG00000202089.1 RNU6-1306P chr11 63882587 63882685 - snRNA KNOWN NA 99 99 1 ENSG00000167771.5 RCOR2 chr11 63911221 63916844 - protein_coding KNOWN OTTHUMG00000150472.2 5624 2738 17 ENSG00000110583.11 NAA40 chr11 63938959 63957328 + protein_coding KNOWN OTTHUMG00000167784.3 18370 5321 54 ENSG00000207200.1 RNU6-45P chr11 63970470 63970576 + snRNA KNOWN NA 107 107 1 ENSG00000176340.3 COX8A chr11 63974607 63976543 + protein_coding KNOWN OTTHUMG00000167785.1 1937 507 2 ENSG00000273026.1 RP11-422P24.10 chr1 153966516 153966930 + antisense NOVEL OTTHUMG00000186417.1 415 415 1 ENSG00000256100.1 AP000721.4 chr11 63974620 63988346 + protein_coding PUTATIVE OTTHUMG00000167909.2 13727 559 3 ENSG00000278375.1 AP000721.1 chr11 63978006 63978080 + miRNA NOVEL NA 75 75 1 ENSG00000167770.10 OTUB1 chr11 63985853 64001811 + protein_coding KNOWN OTTHUMG00000167786.2 15959 5336 70 ENSG00000133315.9 MACROD1 chr11 63998558 64166106 - protein_coding KNOWN OTTHUMG00000167843.2 167549 2089 40 ENSG00000256824.1 RP11-21A7A.2 chr11 64035970 64103653 + antisense NOVEL OTTHUMG00000167787.1 67684 883 4 ENSG00000256481.1 RP11-21A7A.4 chr11 64081690 64087175 + antisense NOVEL OTTHUMG00000167917.1 5486 732 3 ENSG00000126500.3 FLRT1 chr11 64103188 64119173 + protein_coding KNOWN OTTHUMG00000167788.2 15986 3949 2 ENSG00000256341.1 RP11-21A7A.3 chr11 64118272 64119210 - antisense NOVEL OTTHUMG00000167910.1 939 575 2 ENSG00000168439.15 STIP1 chr11 64185272 64204543 + protein_coding KNOWN OTTHUMG00000167789.6 19272 4657 79 ENSG00000149781.11 FERMT3 chr11 64206678 64223886 + protein_coding KNOWN OTTHUMG00000167790.7 17209 3066 61 ENSG00000178585.13 CTNNBIP1 chr1 9848276 9910336 - protein_coding KNOWN OTTHUMG00000001796.1 62061 3339 21 ENSG00000143578.14 CREB3L4 chr1 153967534 153974363 + protein_coding KNOWN OTTHUMG00000037159.2 6830 2904 80 ENSG00000149743.12 TRPT1 chr11 64223799 64226254 - protein_coding KNOWN OTTHUMG00000167844.5 2456 2210 82 ENSG00000149761.7 NUDT22 chr11 64225941 64230686 + protein_coding KNOWN OTTHUMG00000167791.5 4746 3721 40 ENSG00000256116.1 RP11-783K16.14 chr11 64229214 64234352 - antisense NOVEL OTTHUMG00000167845.2 5139 1051 4 ENSG00000110011.12 DNAJC4 chr11 64230278 64234286 + protein_coding KNOWN OTTHUMG00000167792.5 4009 2807 45 ENSG00000173511.8 VEGFB chr11 64234538 64238793 + protein_coding KNOWN OTTHUMG00000167813.3 4256 1545 19 ENSG00000173486.11 FKBP2 chr11 64241003 64244132 + protein_coding KNOWN OTTHUMG00000167814.3 3130 1608 31 ENSG00000173457.9 PPP1R14B chr11 64244480 64246941 - protein_coding KNOWN OTTHUMG00000167846.3 2462 1655 11 ENSG00000256940.1 RP11-783K16.5 chr11 64245964 64248217 + antisense NOVEL OTTHUMG00000167815.1 2254 597 4 ENSG00000257086.1 RP11-783K16.13 chr11 64246939 64249494 - lincRNA NOVEL OTTHUMG00000167847.2 2556 853 4 ENSG00000149782.10 PLCB3 chr11 64251523 64269150 + protein_coding KNOWN OTTHUMG00000167816.1 17628 4964 96 ENSG00000143543.13 JTB chr1 153974269 153977688 - protein_coding KNOWN OTTHUMG00000036590.2 3420 1496 26 ENSG00000002330.12 BAD chr11 64269830 64284704 - protein_coding KNOWN OTTHUMG00000134302.3 14875 1708 22 ENSG00000173264.12 GPR137 chr11 64270062 64289500 + protein_coding KNOWN OTTHUMG00000167817.6 19439 4031 91 ENSG00000182450.11 KCNK4 chr11 64291302 64300031 + protein_coding KNOWN OTTHUMG00000168006.2 8730 2632 50 ENSG00000257069.4 RP11-783K16.10 chr11 64291722 64304769 + processed_transcript NOVEL OTTHUMG00000167818.4 13048 2733 16 ENSG00000207024.1 Y_RNA chr11 64296037 64296138 + misc_RNA NOVEL NA 102 102 1 ENSG00000219435.4 TEX40 chr11 64300446 64304770 + protein_coding KNOWN OTTHUMG00000167820.5 4325 1035 6 ENSG00000173153.12 ESRRA chr11 64305572 64316743 + protein_coding KNOWN OTTHUMG00000150641.5 11172 3030 34 ENSG00000278148.1 AP001453.1 chr11 64313860 64313950 + miRNA NOVEL NA 91 91 1 ENSG00000173113.5 TRMT112 chr11 64316460 64318084 - protein_coding KNOWN OTTHUMG00000167848.4 1625 1625 18 ENSG00000126432.12 PRDX5 chr11 64318088 64321811 + protein_coding KNOWN OTTHUMG00000168805.1 3724 893 15 ENSG00000272654.1 RP11-422P24.11 chr1 153977743 153979160 + lincRNA NOVEL OTTHUMG00000186418.1 1418 1418 1 ENSG00000236935.1 AP003774.1 chr11 64325050 64329504 - antisense NOVEL OTTHUMG00000045125.1 4455 672 3 ENSG00000168071.20 CCDC88B chr11 64340223 64357534 + protein_coding KNOWN OTTHUMG00000045419.5 17312 8331 115 ENSG00000278359.1 MIR7155 chr11 64341849 64341904 - miRNA KNOWN NA 56 56 1 ENSG00000162302.11 RPS6KA4 chr11 64359148 64372215 + protein_coding KNOWN OTTHUMG00000046094.2 13068 3807 85 ENSG00000221273.1 MIR1237 chr11 64368602 64368703 + miRNA KNOWN NA 102 102 1 ENSG00000231680.1 AP003774.6 chr11 64394342 64395831 - lincRNA NOVEL OTTHUMG00000150041.1 1490 985 2 ENSG00000231492.2 AP003774.5 chr11 64420391 64432670 + lincRNA NOVEL OTTHUMG00000066368.2 12280 872 6 ENSG00000181908.5 AP003774.4 chr11 64449074 64451657 + lincRNA NOVEL OTTHUMG00000046124.3 2584 2340 2 ENSG00000232500.1 AP005273.1 chr11 64500853 64505386 + lincRNA NOVEL OTTHUMG00000066367.1 4534 522 3 ENSG00000237363.1 AP006288.1 chr11 64531044 64532970 + unprocessed_pseudogene KNOWN OTTHUMG00000132185.1 1927 395 3 ENSG00000143545.7 RAB13 chr1 153981617 153986358 - protein_coding KNOWN OTTHUMG00000036589.1 4742 2751 32 ENSG00000168065.14 SLC22A11 chr11 64555626 64572875 + protein_coding KNOWN OTTHUMG00000045142.6 17250 5222 47 ENSG00000197891.10 SLC22A12 chr11 64590641 64602353 + protein_coding KNOWN OTTHUMG00000045213.4 11713 3380 47 ENSG00000110076.17 NRXN2 chr11 64606174 64723188 - protein_coding KNOWN OTTHUMG00000045214.17 117015 10580 141 ENSG00000237410.1 AP001092.4 chr11 64646399 64659681 + antisense NOVEL OTTHUMG00000133666.1 13283 469 2 ENSG00000068831.17 RASGRP2 chr11 64726911 64745456 - protein_coding KNOWN OTTHUMG00000045420.35 18546 6084 176 ENSG00000068976.12 PYGM chr11 64746389 64760297 - protein_coding KNOWN OTTHUMG00000066835.2 13909 4981 47 ENSG00000168066.19 SF1 chr11 64764606 64778786 - protein_coding KNOWN OTTHUMG00000066833.12 14181 5972 140 ENSG00000269038.1 AP001462.6 chr11 64778954 64779405 + lincRNA NOVEL OTTHUMG00000066836.2 452 452 1 ENSG00000168067.10 MAP4K2 chr11 64784914 64803241 - protein_coding KNOWN OTTHUMG00000045328.37 18328 7649 218 ENSG00000133895.13 MEN1 chr11 64803510 64811294 - protein_coding KNOWN OTTHUMG00000045366.37 7785 4246 115 ENSG00000177954.10 RPS27 chr1 153990759 153992150 + protein_coding KNOWN OTTHUMG00000036591.1 1392 946 15 ENSG00000171219.8 CDC42BPG chr11 64823387 64844569 - protein_coding KNOWN OTTHUMG00000045365.4 21183 6112 46 ENSG00000110047.16 EHD1 chr11 64851642 64888296 - protein_coding KNOWN OTTHUMG00000066832.16 36655 7101 48 ENSG00000230835.1 AP001187.11 chr11 64881535 64881945 + processed_pseudogene KNOWN OTTHUMG00000066830.2 411 411 1 ENSG00000229719.3 AP001187.9 chr11 64889560 64893449 - lincRNA NOVEL OTTHUMG00000066834.2 3890 3647 2 ENSG00000207648.2 MIR192 chr11 64891132 64891243 - miRNA KNOWN NA 112 112 1 ENSG00000277225.1 MIR194-2 chr11 64891355 64891439 - miRNA KNOWN NA 85 85 1 ENSG00000110046.11 ATG2A chr11 64894546 64917248 - protein_coding KNOWN OTTHUMG00000066831.2 22703 7870 92 ENSG00000274986.1 MIR6750 chr11 64898363 64898437 - miRNA KNOWN NA 75 75 1 ENSG00000274314.1 MIR6749 chr11 64902387 64902455 - miRNA KNOWN NA 69 69 1 ENSG00000068971.12 PPP2R5B chr11 64917553 64934473 + protein_coding KNOWN OTTHUMG00000150043.3 16921 3376 32 ENSG00000143552.8 NUP210L chr1 153992685 154155116 - protein_coding KNOWN OTTHUMG00000035852.3 162432 5889 94 ENSG00000281443.1 AP001187.1 chr11 64926418 64926519 + miRNA NOVEL NA 102 102 1 ENSG00000149735.5 GPHA2 chr11 64934471 64935888 - protein_coding KNOWN OTTHUMG00000165631.1 1418 926 10 ENSG00000168070.10 C11orf85 chr11 64937517 64972085 - protein_coding KNOWN OTTHUMG00000165632.1 34569 2301 47 ENSG00000168062.8 BATF2 chr11 64987943 64997045 - protein_coding KNOWN OTTHUMG00000165633.2 9103 2844 11 ENSG00000213465.6 ARL2 chr11 65014113 65022184 + protein_coding KNOWN OTTHUMG00000165728.1 8072 2084 21 ENSG00000273003.1 ARL2-SNX15 chr11 65014182 65040570 + protein_coding NOVEL OTTHUMG00000185851.1 26389 2392 11 ENSG00000278851.1 MIR6879 chr11 65018505 65018570 + miRNA KNOWN NA 66 66 1 ENSG00000270775.1 AP000436.4 chr11 65025390 65026515 - processed_pseudogene KNOWN OTTHUMG00000184817.1 1126 800 2 ENSG00000110025.11 SNX15 chr11 65027408 65040572 + protein_coding KNOWN OTTHUMG00000037387.5 13165 4915 42 ENSG00000168061.12 SAC3D1 chr11 65040901 65044828 + protein_coding KNOWN OTTHUMG00000165594.1 3928 1772 18 ENSG00000231416.1 RP11-422P24.9 chr1 153995632 153995960 + processed_pseudogene KNOWN OTTHUMG00000157000.1 329 329 1 ENSG00000168060.13 NAALADL1 chr11 65044818 65058549 - protein_coding KNOWN OTTHUMG00000165595.1 13732 4044 196 ENSG00000146670.8 CDCA5 chr11 65066300 65084164 - protein_coding KNOWN OTTHUMG00000150420.1 17865 3925 51 ENSG00000162300.10 ZFPL1 chr11 65084223 65088400 + protein_coding KNOWN OTTHUMG00000165597.2 4178 2784 57 ENSG00000187066.7 TMEM262 chr11 65084979 65089375 - protein_coding KNOWN OTTHUMG00000165598.3 4397 4194 15 ENSG00000149823.6 VPS51 chr11 65089324 65111860 + protein_coding KNOWN OTTHUMG00000165600.1 22537 4878 74 ENSG00000254501.1 AP003068.9 chr11 65110714 65111695 - antisense NOVEL OTTHUMG00000165602.1 982 544 2 ENSG00000149809.13 TM7SF2 chr11 65111845 65116384 + protein_coding KNOWN OTTHUMG00000165603.1 4540 3408 153 ENSG00000174276.6 ZNHIT2 chr11 65116403 65117708 - protein_coding KNOWN OTTHUMG00000165604.1 1306 1306 3 ENSG00000255173.1 AP003068.12 chr11 65117157 65117458 + antisense NOVEL OTTHUMG00000165605.1 302 175 2 ENSG00000278952.1 RP11-399J13.2 chr11 65118310 65119111 + TEC KNOWN OTTHUMG00000173022.1 802 802 1 ENSG00000200220.1 RNU6-179P chr1 154039916 154040022 - snRNA KNOWN NA 107 107 1 ENSG00000149806.9 FAU chr11 65120628 65122473 - protein_coding KNOWN OTTHUMG00000165606.1 1846 1846 33 ENSG00000162298.15 SYVN1 chr11 65121780 65134533 - protein_coding KNOWN OTTHUMG00000165607.1 12754 5496 129 ENSG00000149792.7 MRPL49 chr11 65122183 65127371 + protein_coding KNOWN OTTHUMG00000165608.1 5189 3080 30 ENSG00000277547.1 MIR6751 chr11 65129916 65129978 - miRNA KNOWN NA 63 63 1 ENSG00000254455.1 HIGD1AP10 chr11 65145691 65145972 - processed_pseudogene KNOWN OTTHUMG00000165609.1 282 282 1 ENSG00000222477.1 RNU2-23P chr11 65147584 65147778 + snRNA KNOWN NA 195 195 1 ENSG00000255058.1 PDCL2P2 chr11 65160194 65160382 - processed_pseudogene KNOWN OTTHUMG00000165610.1 189 189 1 ENSG00000204710.2 SPDYC chr11 65170154 65173244 + protein_coding KNOWN OTTHUMG00000165611.1 3091 991 7 ENSG00000255200.1 AP003068.18 chr11 65174117 65176470 - transcribed_processed_pseudogene KNOWN OTTHUMG00000165612.1 2354 2354 2 ENSG00000249251.1 PGAM1P8 chr11 65175035 65175502 - processed_pseudogene KNOWN OTTHUMG00000160126.1 468 468 1 ENSG00000231837.2 RPS7P2 chr1 154078866 154079963 + processed_pseudogene KNOWN OTTHUMG00000036513.2 1098 607 2 ENSG00000254614.2 AP003068.23 chr11 65177606 65181834 - antisense NOVEL OTTHUMG00000165613.2 4229 1791 4 ENSG00000014216.14 CAPN1 chr11 65180566 65212006 + protein_coding KNOWN OTTHUMG00000165614.1 31441 7553 209 ENSG00000197847.11 SLC22A20 chr11 65213840 65242757 + unitary_pseudogene KNOWN OTTHUMG00000165615.1 28918 3983 40 ENSG00000014138.7 POLA2 chr11 65261762 65305589 + protein_coding KNOWN OTTHUMG00000165951.3 43828 5726 76 ENSG00000274509.1 AP000944.1 chr11 65286440 65286509 + miRNA NOVEL NA 70 70 1 ENSG00000149798.4 CDC42EP2 chr11 65314818 65322429 + protein_coding KNOWN OTTHUMG00000165958.1 7612 2224 4 ENSG00000133884.8 DPF2 chr11 65333754 65353249 + protein_coding KNOWN OTTHUMG00000165985.3 19496 7715 75 ENSG00000173825.6 TIGD3 chr11 65354767 65357613 + protein_coding KNOWN OTTHUMG00000165986.1 2847 2012 2 ENSG00000255478.1 RP11-867O8.5 chr11 65367438 65375299 + antisense NOVEL OTTHUMG00000165997.1 7862 564 3 ENSG00000162241.11 SLC25A45 chr11 65375192 65383701 - protein_coding KNOWN OTTHUMG00000166255.3 8510 7855 82 ENSG00000263987.1 MIR5698 chr1 154104521 154104592 - miRNA KNOWN NA 72 72 1 ENSG00000126391.12 FRMD8 chr11 65386599 65413525 + protein_coding KNOWN OTTHUMG00000166275.2 26927 4091 55 ENSG00000245532.5 NEAT1 chr11 65422774 65445540 + lincRNA KNOWN OTTHUMG00000166321.6 22767 22767 10 ENSG00000278144.1 NEAT1_1 chr11 65423273 65423392 + misc_RNA NOVEL NA 120 120 1 ENSG00000278050.1 NEAT1_2 chr11 65423638 65423742 + misc_RNA NOVEL NA 105 105 1 ENSG00000277599.1 NEAT1_3 chr11 65423960 65424118 + misc_RNA NOVEL NA 159 159 1 ENSG00000273834.1 MIR612 chr11 65444458 65444557 + miRNA KNOWN NA 100 100 1 ENSG00000275948.1 mascRNA-menRNA chr11 65445541 65445598 + sRNA NOVEL NA 58 58 1 ENSG00000173727.10 CMB9-22P13.1 chr11 65455258 65466720 + lincRNA NOVEL OTTHUMG00000186654.1 11463 1480 6 ENSG00000279243.1 CMB9-22P13.2 chr11 65487241 65488136 - lincRNA NOVEL OTTHUMG00000189231.1 896 536 3 ENSG00000251562.6 MALAT1 chr11 65497762 65506516 + lincRNA KNOWN OTTHUMG00000166322.2 8755 8755 39 ENSG00000223989.1 RP11-84A14.5 chr1 9848318 9850154 + antisense NOVEL OTTHUMG00000037769.1 1837 424 3 ENSG00000143549.18 TPM3 chr1 154155304 154194648 - protein_coding KNOWN OTTHUMG00000035853.5 39345 8389 146 ENSG00000270117.1 AP000769.7 chr11 65498010 65498405 - lincRNA NOVEL OTTHUMG00000184021.1 396 396 1 ENSG00000279576.1 MALAT1 chr11 65502034 65503622 - protein_coding KNOWN NA 1589 1589 1 ENSG00000278217.1 MALAT1 chr11 65502914 65503008 + misc_RNA NOVEL NA 95 95 1 ENSG00000274072.1 mascRNA-menRNA chr11 65506117 65506173 + sRNA NOVEL NA 57 57 1 ENSG00000270526.1 SNRPGP19 chr11 65514403 65514923 - processed_pseudogene KNOWN OTTHUMG00000184809.1 521 189 2 ENSG00000142186.15 SCYL1 chr11 65525077 65538704 + protein_coding KNOWN OTTHUMG00000166325.5 13628 4282 152 ENSG00000168056.13 LTBP3 chr11 65538560 65558930 - protein_coding KNOWN OTTHUMG00000166575.5 20371 10543 260 ENSG00000279093.1 RP11-856B14.10 chr11 65561484 65561607 + TEC KNOWN OTTHUMG00000172937.1 124 124 1 ENSG00000260233.3 SSSCA1-AS1 chr11 65568482 65570423 - processed_transcript NOVEL OTTHUMG00000166387.2 1942 1942 2 ENSG00000173465.6 SSSCA1 chr11 65570430 65573942 + protein_coding KNOWN OTTHUMG00000166388.2 3513 2008 23 ENSG00000264384.2 RN7SL431P chr1 154166245 154166549 - misc_RNA KNOWN NA 305 305 1 ENSG00000176973.7 FAM89B chr11 65572349 65574198 + protein_coding KNOWN OTTHUMG00000166499.1 1850 1458 6 ENSG00000173442.10 EHBP1L1 chr11 65576038 65592650 + protein_coding KNOWN OTTHUMG00000166520.2 16613 6705 55 ENSG00000213445.7 SIPA1 chr11 65585395 65650930 + protein_coding KNOWN OTTHUMG00000166541.1 65536 4692 105 ENSG00000173338.11 KCNK7 chr11 65592855 65595996 - protein_coding KNOWN OTTHUMG00000166528.1 3142 1563 17 ENSG00000173327.6 MAP3K11 chr11 65597755 65615382 - protein_coding KNOWN OTTHUMG00000166529.3 17628 10564 59 ENSG00000197136.4 PCNXL3 chr11 65615773 65637439 + protein_coding KNOWN OTTHUMG00000166539.2 21667 7972 59 ENSG00000266041.1 MIR4690 chr11 65636310 65636369 + miRNA KNOWN NA 60 60 1 ENSG00000265874.1 MIR4489 chr11 65649192 65649253 + miRNA KNOWN NA 62 62 1 ENSG00000173039.17 RELA chr11 65653596 65663094 - protein_coding KNOWN OTTHUMG00000166566.5 9499 5464 179 ENSG00000239356.3 RN7SL309P chr11 65695552 65695837 + misc_RNA KNOWN NA 286 286 1 ENSG00000215938.2 MIR190B chr1 154193642 154193753 - miRNA KNOWN NA 112 112 1 ENSG00000172977.11 KAT5 chr11 65711996 65719604 + protein_coding KNOWN OTTHUMG00000166617.2 7609 3732 122 ENSG00000172922.7 RNASEH2C chr11 65714896 65720947 - protein_coding KNOWN OTTHUMG00000166601.2 6052 3697 25 ENSG00000214659.4 KRT8P26 chr11 65726939 65728214 + processed_pseudogene KNOWN OTTHUMG00000166591.1 1276 1276 1 ENSG00000255557.1 RP11-770G2.2 chr11 65745729 65771585 + lincRNA NOVEL OTTHUMG00000166592.1 25857 464 2 ENSG00000254470.2 AP5B1 chr11 65775893 65780802 - protein_coding KNOWN OTTHUMG00000166593.2 4910 4811 2 ENSG00000172818.8 OVOL1 chr11 65787022 65797219 + protein_coding KNOWN OTTHUMG00000166600.1 10198 3849 10 ENSG00000255120.4 OVOL1-AS1 chr11 65789051 65790868 - antisense NOVEL OTTHUMG00000166597.1 1818 685 6 ENSG00000255404.1 RP11-770G2.5 chr11 65795946 65797219 - antisense NOVEL OTTHUMG00000166598.1 1274 1044 2 ENSG00000172757.11 CFL1 chr11 65823022 65862026 - protein_coding KNOWN OTTHUMG00000166602.3 39005 5863 51 ENSG00000172803.16 SNX32 chr11 65833641 65856896 + protein_coding KNOWN OTTHUMG00000128491.3 23256 3966 51 ENSG00000163263.6 C1orf189 chr1 154199372 154206333 - protein_coding KNOWN OTTHUMG00000035982.1 6962 387 4 ENSG00000172732.10 MUS81 chr11 65857126 65867653 + protein_coding KNOWN OTTHUMG00000166633.3 10528 5476 123 ENSG00000172638.11 EFEMP2 chr11 65866441 65873592 - protein_coding KNOWN OTTHUMG00000166664.6 7152 5397 103 ENSG00000172543.6 CTSW chr11 65879809 65883741 + protein_coding KNOWN OTTHUMG00000166663.1 3933 1719 27 ENSG00000172500.11 FIBP chr11 65883741 65888539 - protein_coding KNOWN OTTHUMG00000166846.2 4799 3353 79 ENSG00000175602.3 CCDC85B chr11 65890112 65891635 + protein_coding KNOWN OTTHUMG00000166722.1 1524 1524 1 ENSG00000175592.7 FOSL1 chr11 65892049 65900573 - protein_coding KNOWN OTTHUMG00000166715.2 8525 1887 16 ENSG00000175573.6 C11orf68 chr11 65916808 65919117 - protein_coding KNOWN OTTHUMG00000157153.2 2310 1761 5 ENSG00000175550.6 DRAP1 chr11 65919257 65921561 + protein_coding KNOWN OTTHUMG00000166723.3 2305 1737 46 ENSG00000175513.8 TSGA10IP chr11 65945445 65959963 + protein_coding KNOWN OTTHUMG00000166753.5 14519 2062 26 ENSG00000175467.13 SART1 chr11 65961689 65979828 + protein_coding KNOWN OTTHUMG00000166771.2 18140 4323 50 ENSG00000143612.17 C1orf43 chr1 154206706 154220628 - protein_coding KNOWN OTTHUMG00000035981.2 13923 2582 44 ENSG00000254867.1 RP11-1167A19.6 chr11 65983679 65984331 - processed_pseudogene KNOWN OTTHUMG00000166672.1 653 653 1 ENSG00000175376.7 EIF1AD chr11 65996545 66002176 - protein_coding KNOWN OTTHUMG00000166671.3 5632 3327 56 ENSG00000175334.6 BANF1 chr11 66002079 66004149 + protein_coding KNOWN OTTHUMG00000166749.1 2071 1645 21 ENSG00000175315.2 CST6 chr11 66011841 66013505 + protein_coding KNOWN OTTHUMG00000166750.1 1665 759 3 ENSG00000175294.5 CATSPER1 chr11 66016752 66026517 - protein_coding KNOWN OTTHUMG00000166668.1 9766 2687 18 ENSG00000175229.6 GAL3ST3 chr11 66041952 66049180 - protein_coding KNOWN OTTHUMG00000166667.1 7229 2481 7 ENSG00000087365.13 SF3B2 chr11 66050729 66069308 + protein_coding KNOWN OTTHUMG00000166751.3 18580 9795 134 ENSG00000255038.1 RP11-1167A19.2 chr11 66067277 66069619 - antisense NOVEL OTTHUMG00000166666.1 2343 502 2 ENSG00000175115.10 PACS1 chr11 66070363 66244747 + protein_coding KNOWN OTTHUMG00000166889.3 174385 9037 88 ENSG00000281025.1 Metazoa_SRP chr11 66164490 66164747 - misc_RNA NOVEL NA 258 258 1 ENSG00000143569.17 UBAP2L chr1 154220179 154271510 + protein_coding KNOWN OTTHUMG00000035983.3 51332 7503 230 ENSG00000255320.1 RP11-755F10.1 chr11 66244840 66246239 - antisense NOVEL OTTHUMG00000166866.1 1400 397 2 ENSG00000174996.10 KLC2 chr11 66257294 66267860 + protein_coding KNOWN OTTHUMG00000133757.4 10567 5479 119 ENSG00000254461.1 RP11-755F10.3 chr11 66259567 66261834 - antisense NOVEL OTTHUMG00000166904.1 2268 539 3 ENSG00000280605.1 AP001107.1 chr11 66260055 66260173 + miRNA NOVEL NA 119 119 1 ENSG00000254855.1 RP11-867G23.1 chr11 66264777 66265666 - antisense NOVEL OTTHUMG00000166905.1 890 479 3 ENSG00000254762.1 RP11-867G23.2 chr11 66267635 66268129 - antisense NOVEL OTTHUMG00000166906.1 495 272 2 ENSG00000174903.13 RAB1B chr11 66268533 66277492 + protein_coding KNOWN OTTHUMG00000166916.2 8960 2007 18 ENSG00000245156.1 RP11-867G23.3 chr11 66269832 66278525 - lincRNA NOVEL OTTHUMG00000166907.1 8694 2792 2 ENSG00000254452.1 RP11-867G23.4 chr11 66276779 66277492 - antisense NOVEL OTTHUMG00000166908.1 714 589 4 ENSG00000174871.9 CNIH2 chr11 66278190 66285301 + protein_coding KNOWN OTTHUMG00000166919.1 7112 2069 31 ENSG00000252817.2 AL590431.1 chr1 154254444 154254522 + miRNA NOVEL NA 79 79 1 ENSG00000174851.13 YIF1A chr11 66284580 66289170 - protein_coding KNOWN OTTHUMG00000102079.5 4591 2375 63 ENSG00000179292.4 TMEM151A chr11 66291870 66296664 + protein_coding KNOWN OTTHUMG00000166920.1 4795 2562 2 ENSG00000254458.1 RP11-867G23.13 chr11 66312853 66319237 + antisense NOVEL OTTHUMG00000167072.1 6385 544 2 ENSG00000174807.3 CD248 chr11 66314487 66317044 - protein_coding KNOWN OTTHUMG00000167073.2 2558 2558 1 ENSG00000174791.9 RIN1 chr11 66330242 66336840 - protein_coding KNOWN OTTHUMG00000167085.2 6599 5469 49 ENSG00000254756.1 RP11-867G23.12 chr11 66334494 66339875 + antisense NOVEL OTTHUMG00000167074.1 5382 516 3 ENSG00000174744.12 BRMS1 chr11 66337333 66345125 - protein_coding KNOWN OTTHUMG00000167081.2 7793 2514 66 ENSG00000174684.6 B4GAT1 chr11 66345372 66347692 - protein_coding KNOWN OTTHUMG00000167082.1 2321 2072 2 ENSG00000255468.5 RP11-867G23.8 chr11 66347950 66364804 + antisense NOVEL OTTHUMG00000166921.3 16855 1540 9 ENSG00000174669.10 SLC29A2 chr11 66362521 66372214 - protein_coding KNOWN OTTHUMG00000169056.1 9694 2720 85 ENSG00000201129.1 SNORA58 chr1 154259727 154259862 + snoRNA NOVEL NA 136 136 1 ENSG00000276918.1 Metazoa_SRP chr11 66374138 66374435 - misc_RNA NOVEL NA 298 298 1 ENSG00000254736.1 BRD9P1 chr11 66389609 66390168 + processed_pseudogene KNOWN OTTHUMG00000166923.1 560 560 1 ENSG00000202317.1 RNU1-84P chr11 66393449 66393612 + snRNA KNOWN NA 164 164 1 ENSG00000254510.1 RP11-867G23.10 chr11 66409158 66417137 + processed_transcript NOVEL OTTHUMG00000166924.1 7980 1330 8 ENSG00000174576.7 NPAS4 chr11 66421004 66426707 + protein_coding KNOWN OTTHUMG00000167045.1 5704 3424 17 ENSG00000201733.1 SNORA43 chr11 66432763 66432902 + snoRNA NOVEL NA 140 140 1 ENSG00000174547.12 MRPL11 chr11 66435075 66466738 - protein_coding KNOWN OTTHUMG00000167097.2 31664 2539 29 ENSG00000254596.1 CTD-3074O7.7 chr11 66454234 66454581 + processed_pseudogene KNOWN OTTHUMG00000167108.1 348 348 1 ENSG00000174516.13 PELI3 chr11 66466327 66477337 + protein_coding KNOWN OTTHUMG00000167109.1 11011 3926 51 ENSG00000255517.5 CTD-3074O7.5 chr11 66473490 66480233 - antisense NOVEL OTTHUMG00000167095.2 6744 2057 12 ENSG00000143575.13 HAX1 chr1 154272511 154275875 + protein_coding KNOWN OTTHUMG00000035978.4 3365 2155 62 ENSG00000254986.6 DPP3 chr11 66480013 66509657 + protein_coding KNOWN OTTHUMG00000167143.5 29645 3977 129 ENSG00000256349.1 CTD-3074O7.11 chr11 66509079 66533613 + protein_coding NOVEL OTTHUMG00000167719.2 24535 3547 17 ENSG00000174483.18 BBS1 chr11 66510606 66533627 + protein_coding KNOWN OTTHUMG00000167110.5 23022 6145 207 ENSG00000174165.6 ZDHHC24 chr11 66520637 66546238 - protein_coding KNOWN OTTHUMG00000167096.3 25602 6266 16 ENSG00000248746.4 ACTN3 chr11 66546395 66563329 + protein_coding KNOWN OTTHUMG00000160815.3 16935 3517 47 ENSG00000250105.1 CTD-3074O7.2 chr11 66558866 66560384 - lincRNA NOVEL OTTHUMG00000160821.1 1519 580 2 ENSG00000174080.9 CTSF chr11 66563463 66568841 - protein_coding KNOWN OTTHUMG00000167090.2 5379 2896 56 ENSG00000182791.4 CCDC87 chr11 66590176 66593083 - protein_coding KNOWN OTTHUMG00000167237.1 2908 2908 1 ENSG00000173992.7 CCS chr11 66592821 66606019 + protein_coding KNOWN OTTHUMG00000167238.1 13199 2474 49 ENSG00000199325.1 RNU4-39P chr11 66614964 66615090 - snRNA KNOWN NA 127 127 1 ENSG00000252682.1 SNORD59 chr1 154288460 154288527 + snoRNA NOVEL NA 68 68 1 ENSG00000239306.4 RBM14 chr11 66616582 66627347 + protein_coding KNOWN OTTHUMG00000140380.5 10766 3937 23 ENSG00000248643.5 RBM14-RBM4 chr11 66616626 66646469 + protein_coding KNOWN OTTHUMG00000160813.4 29844 2577 10 ENSG00000173933.18 RBM4 chr11 66638617 66666682 + protein_coding KNOWN OTTHUMG00000154171.5 28066 4897 40 ENSG00000173914.10 RBM4B chr11 66664998 66677921 - protein_coding KNOWN OTTHUMG00000167243.3 12924 4325 23 ENSG00000258297.1 RP11-658F2.8 chr11 66666036 66668374 + antisense NOVEL OTTHUMG00000170428.1 2339 2339 2 ENSG00000173898.10 SPTBN2 chr11 66685248 66729226 - protein_coding KNOWN OTTHUMG00000167262.2 43979 9137 175 ENSG00000239553.3 RN7SL12P chr11 66712720 66713009 - misc_RNA KNOWN NA 290 290 1 ENSG00000173715.14 C11orf80 chr11 66744451 66843328 + protein_coding KNOWN OTTHUMG00000167164.8 98878 3765 157 ENSG00000213409.4 RP11-658F2.3 chr11 66761575 66762399 - processed_pseudogene KNOWN OTTHUMG00000167165.1 825 825 1 ENSG00000254984.1 FTLP6 chr11 66771246 66771667 - processed_pseudogene KNOWN OTTHUMG00000167166.1 422 422 1 ENSG00000162441.10 LZIC chr1 9922113 9943407 - protein_coding KNOWN OTTHUMG00000001804.3 21295 2794 30 ENSG00000212292.1 RNU6-239P chr1 154295503 154295601 + snRNA KNOWN NA 99 99 1 ENSG00000173653.6 RCE1 chr11 66842835 66846546 + protein_coding KNOWN OTTHUMG00000167098.1 3712 2995 48 ENSG00000173599.12 PC chr11 66848233 66958376 - protein_coding KNOWN OTTHUMG00000167099.1 110144 5927 123 ENSG00000173621.8 LRFN4 chr11 66856647 66860475 + protein_coding KNOWN OTTHUMG00000167100.2 3829 2828 7 ENSG00000274255.1 AP003176.1 chr11 66882812 66882870 - miRNA NOVEL NA 59 59 1 ENSG00000239099.1 RNU7-23P chr11 66919762 66919823 + snRNA KNOWN NA 62 62 1 ENSG00000266423.1 MIR3163 chr11 66934434 66934506 - miRNA KNOWN NA 73 73 1 ENSG00000173237.4 C11orf86 chr11 66975277 66977004 + protein_coding KNOWN OTTHUMG00000153671.2 1728 1187 2 ENSG00000173227.12 SYT12 chr11 67006778 67050863 + protein_coding KNOWN OTTHUMG00000167101.1 44086 10830 40 ENSG00000173156.5 RHOD chr11 67056818 67072013 + protein_coding KNOWN OTTHUMG00000167102.4 15196 1265 12 ENSG00000173120.13 KDM2A chr11 67119269 67258087 + protein_coding KNOWN OTTHUMG00000167103.2 138819 10380 131 ENSG00000222457.1 RNU6-121P chr1 154297650 154297748 + snRNA KNOWN NA 99 99 1 ENSG00000179038.8 RP11-157K17.5 chr11 67195569 67197167 - transcribed_processed_pseudogene KNOWN OTTHUMG00000187455.1 1599 1599 2 ENSG00000173020.9 ADRBK1 chr11 67266410 67286556 + protein_coding KNOWN OTTHUMG00000167104.1 20147 6665 106 ENSG00000172932.13 ANKRD13D chr11 67288547 67302485 + protein_coding KNOWN OTTHUMG00000162929.3 13939 6643 122 ENSG00000172830.11 SSH3 chr11 67303448 67312607 + protein_coding KNOWN OTTHUMG00000167105.2 9160 3641 81 ENSG00000275200.1 AP001885.1 chr11 67310006 67310065 + miRNA NOVEL NA 60 60 1 ENSG00000172613.6 RAD9A chr11 67317871 67398410 + protein_coding KNOWN OTTHUMG00000167670.5 80540 4169 69 ENSG00000175482.7 POLD4 chr11 67350777 67356972 - protein_coding KNOWN OTTHUMG00000167135.4 6196 3049 36 ENSG00000256514.1 AP003419.11 chr11 67351572 67373584 - protein_coding PUTATIVE OTTHUMG00000167774.2 22013 711 4 ENSG00000274251.1 CTC-1337H24.3 chr11 67353629 67354348 + lincRNA NOVEL OTTHUMG00000188152.1 720 527 2 ENSG00000201684.1 RN7SKP239 chr11 67362414 67362708 + misc_RNA KNOWN NA 295 295 1 ENSG00000278694.1 RP11-137P24.5 chr1 154312462 154313084 + unprocessed_pseudogene KNOWN OTTHUMG00000187536.1 623 234 2 ENSG00000175505.10 CLCF1 chr11 67364168 67374177 - protein_coding KNOWN OTTHUMG00000167669.1 10010 1975 6 ENSG00000275484.1 CTC-1337H24.4 chr11 67374416 67374932 + lincRNA NOVEL OTTHUMG00000188153.1 517 517 1 ENSG00000253024.1 RNU6-1238P chr11 67395210 67395311 - snRNA KNOWN NA 102 102 1 ENSG00000172531.13 PPP1CA chr11 67398183 67421183 - protein_coding KNOWN OTTHUMG00000167671.3 23001 2711 56 ENSG00000175463.10 TBC1D10C chr11 67403915 67410089 + protein_coding KNOWN OTTHUMG00000167139.3 6175 4993 55 ENSG00000172508.9 CARNS1 chr11 67414968 67425607 + protein_coding KNOWN OTTHUMG00000167672.1 10640 5670 48 ENSG00000175634.13 RPS6KB2 chr11 67428460 67435408 + protein_coding KNOWN OTTHUMG00000167673.7 6949 5822 93 ENSG00000255949.1 AP003419.16 chr11 67431367 67435399 - antisense NOVEL OTTHUMG00000168038.1 4033 470 2 ENSG00000213402.2 PTPRCAP chr11 67435510 67438067 - protein_coding KNOWN OTTHUMG00000150325.1 2558 1292 2 ENSG00000172725.12 CORO1B chr11 67435510 67443821 - protein_coding KNOWN OTTHUMG00000167775.2 8312 5327 74 ENSG00000143595.11 AQP10 chr1 154321090 154325325 + protein_coding KNOWN OTTHUMG00000035980.1 4236 2292 15 ENSG00000175514.2 GPR152 chr11 67451301 67452729 - protein_coding KNOWN OTTHUMG00000168032.1 1429 1429 1 ENSG00000175544.12 CABP4 chr11 67452406 67460313 + protein_coding KNOWN OTTHUMG00000168033.4 7908 3786 25 ENSG00000172663.7 TMEM134 chr11 67461710 67469272 - protein_coding KNOWN OTTHUMG00000168034.4 7563 5892 74 ENSG00000110711.8 AIP chr11 67483041 67491103 + protein_coding KNOWN OTTHUMG00000167674.3 8063 1640 17 ENSG00000276769.1 MIR6752 chr11 67490245 67490315 + miRNA KNOWN NA 71 71 1 ENSG00000110697.11 PITPNM1 chr11 67491768 67506263 - protein_coding KNOWN OTTHUMG00000167675.2 14496 6449 123 ENSG00000167797.6 CDK2AP2 chr11 67506497 67508649 - protein_coding KNOWN OTTHUMG00000167676.1 2153 2019 16 ENSG00000167791.10 CABP2 chr11 67518912 67523428 - protein_coding KNOWN OTTHUMG00000168014.3 4517 996 20 ENSG00000084207.14 GSTP1 chr11 67583595 67586660 + protein_coding KNOWN OTTHUMG00000137430.2 3066 1915 29 ENSG00000184224.3 C11orf72 chr11 67602880 67606706 - lincRNA KNOWN OTTHUMG00000156309.2 3827 2434 5 ENSG00000143515.15 ATP8B2 chr1 154325553 154351307 + protein_coding KNOWN OTTHUMG00000035979.5 25755 7572 62 ENSG00000255119.1 RP11-655M14.12 chr11 67605521 67606642 + antisense NOVEL OTTHUMG00000167300.1 1122 555 2 ENSG00000167792.10 NDUFV1 chr11 67606852 67612535 + protein_coding KNOWN OTTHUMG00000166215.4 5684 4154 137 ENSG00000231793.4 DOC2GP chr11 67612653 67616257 - unitary_pseudogene KNOWN OTTHUMG00000154229.1 3605 1579 12 ENSG00000255318.1 RP11-655M14.13 chr11 67618279 67627304 - lincRNA NOVEL OTTHUMG00000167549.1 9026 831 2 ENSG00000167799.8 NUDT8 chr11 67627938 67629930 - protein_coding KNOWN OTTHUMG00000167292.1 1993 1475 9 ENSG00000167800.9 TBX10 chr11 67631303 67639560 - protein_coding KNOWN OTTHUMG00000167291.1 8258 1548 8 ENSG00000132744.6 ACY3 chr11 67642555 67650659 - protein_coding KNOWN OTTHUMG00000167283.1 8105 1300 15 ENSG00000227834.1 AP003385.2 chr11 67651576 67653404 - unitary_pseudogene KNOWN OTTHUMG00000154687.1 1829 893 3 ENSG00000132746.13 ALDH3B2 chr11 67662162 67681200 - protein_coding KNOWN OTTHUMG00000167284.1 19039 3235 52 ENSG00000239559.2 RPL37P2 chr11 67682772 67683058 - processed_pseudogene KNOWN OTTHUMG00000158400.2 287 287 1 ENSG00000237920.2 RP11-350G8.4 chr1 154376966 154379273 - unprocessed_pseudogene KNOWN OTTHUMG00000036075.2 2308 317 3 ENSG00000184795.9 UNC93B5 chr11 67711702 67716005 - unprocessed_pseudogene KNOWN OTTHUMG00000167244.1 4304 699 3 ENSG00000235855.3 OR7E145P chr11 67722483 67723455 - unprocessed_pseudogene KNOWN OTTHUMG00000167245.1 973 973 1 ENSG00000266451.1 AP003385.1 chr11 67734521 67734608 - miRNA NOVEL NA 88 88 1 ENSG00000254447.1 OR7E11P chr11 67735608 67736559 - unprocessed_pseudogene KNOWN OTTHUMG00000167246.1 952 952 1 ENSG00000254883.1 RP11-655M14.14 chr11 67744322 67744645 + processed_pseudogene KNOWN OTTHUMG00000167550.1 324 324 1 ENSG00000255147.1 RP11-655M14.4 chr11 67749043 67756968 - unprocessed_pseudogene KNOWN OTTHUMG00000167247.2 7926 374 3 ENSG00000227620.4 ALG1L8P chr11 67785273 67792335 + unprocessed_pseudogene KNOWN OTTHUMG00000167242.1 7063 760 8 ENSG00000160172.9 FAM86C2P chr11 67791648 67805336 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000167222.2 13689 3402 21 ENSG00000273819.1 ENPP7P7 chr11 67812557 67873367 - unprocessed_pseudogene KNOWN OTTHUMG00000187771.1 60811 1102 4 ENSG00000254792.1 RP11-119D9.4 chr11 67840942 67841049 + processed_pseudogene KNOWN OTTHUMG00000167556.1 108 108 1 ENSG00000226855.1 RP11-350G8.3 chr1 154378207 154379089 - processed_pseudogene KNOWN OTTHUMG00000036074.1 883 883 1 ENSG00000251637.5 RP11-119D9.1 chr11 67886477 67906350 + lincRNA NOVEL OTTHUMG00000167223.3 19874 3962 8 ENSG00000206587.1 RNU6-46P chr11 67895631 67895737 + snRNA KNOWN NA 107 107 1 ENSG00000243672.1 RPS3AP40 chr11 67925651 67926431 - processed_pseudogene KNOWN OTTHUMG00000158401.2 781 781 1 ENSG00000221553.1 AC004924.1 chr11 67933214 67933362 + miRNA NOVEL NA 149 149 1 ENSG00000254610.1 RP5-903G2.2 chr11 67934563 67939774 - lincRNA NOVEL OTTHUMG00000167303.2 5212 455 3 ENSG00000254850.2 RP5-901A4.4 chr11 67935558 67935926 + processed_pseudogene KNOWN OTTHUMG00000167557.2 369 369 1 ENSG00000255230.1 RP5-901A4.5 chr11 67965873 67966227 - processed_pseudogene KNOWN OTTHUMG00000167561.1 355 355 1 ENSG00000255554.1 OR7E1P chr11 67974286 67975243 - unprocessed_pseudogene KNOWN OTTHUMG00000167471.1 958 958 1 ENSG00000110057.6 UNC93B1 chr11 67991104 68004982 - protein_coding KNOWN OTTHUMG00000167472.3 13879 3548 52 ENSG00000006534.14 ALDH3B1 chr11 68008578 68029282 + protein_coding KNOWN OTTHUMG00000154910.6 20705 6626 78 ENSG00000228013.1 RP11-350G8.5 chr1 154402328 154406564 - antisense NOVEL OTTHUMG00000036070.1 4237 1756 2 ENSG00000255306.1 RP5-901A4.1 chr11 68024809 68030461 - antisense NOVEL OTTHUMG00000167301.1 5653 739 4 ENSG00000110717.9 NDUFS8 chr11 68030617 68036644 + protein_coding KNOWN OTTHUMG00000167331.2 6028 4523 67 ENSG00000277703.1 MIR7113 chr11 68032864 68032922 + miRNA KNOWN NA 59 59 1 ENSG00000266737.1 MIR4691 chr11 68033897 68033981 + miRNA KNOWN NA 85 85 1 ENSG00000110719.8 TCIRG1 chr11 68039016 68050895 + protein_coding KNOWN OTTHUMG00000167358.4 11880 4384 120 ENSG00000275022.1 MIR6753 chr11 68044794 68044957 + miRNA KNOWN NA 164 164 1 ENSG00000255031.4 RP11-802E16.3 chr11 68050740 68053762 + antisense NOVEL OTTHUMG00000167383.2 3023 1209 8 ENSG00000110721.10 CHKA chr11 68052859 68121444 - protein_coding KNOWN OTTHUMG00000167424.3 68586 3877 55 ENSG00000255236.2 CTD-2655K5.1 chr11 68122053 68130518 + antisense NOVEL OTTHUMG00000167388.2 8466 776 4 ENSG00000110066.13 SUV420H1 chr11 68154863 68213828 - protein_coding KNOWN OTTHUMG00000150484.6 58966 8632 113 ENSG00000160712.11 IL6R chr1 154405193 154469450 + protein_coding KNOWN OTTHUMG00000036073.2 64258 6453 51 ENSG00000171067.9 C11orf24 chr11 68261335 68272001 - protein_coding KNOWN OTTHUMG00000167478.1 10667 3406 29 ENSG00000162337.10 LRP5 chr11 68312609 68449275 + protein_coding KNOWN OTTHUMG00000167570.1 136667 6164 59 ENSG00000110075.13 PPP6R3 chr11 68460731 68615334 + protein_coding KNOWN OTTHUMG00000167596.4 154604 8305 296 ENSG00000254856.1 NDUFA3P2 chr11 68488609 68488840 - processed_pseudogene KNOWN OTTHUMG00000167668.1 232 232 1 ENSG00000222339.1 AP000807.2 chr11 68505572 68505651 - miRNA NOVEL NA 80 80 1 ENSG00000212093.1 AP000807.1 chr11 68506083 68506166 - miRNA NOVEL NA 84 84 1 ENSG00000260808.1 CTD-2007L18.5 chr11 68612899 68616711 - lincRNA NOVEL OTTHUMG00000173013.1 3813 1094 8 ENSG00000266854.1 AP003096.1 chr11 68619499 68619595 + miRNA NOVEL NA 97 97 1 ENSG00000069482.6 GAL chr11 68683779 68691175 + protein_coding KNOWN OTTHUMG00000167890.2 7397 1300 8 ENSG00000132749.9 MTL5 chr11 68707440 68751564 - protein_coding KNOWN OTTHUMG00000167891.2 44125 5833 40 ENSG00000228264.1 PSMD8P1 chr1 154414369 154415137 - processed_pseudogene KNOWN OTTHUMG00000036071.1 769 769 1 ENSG00000110090.11 CPT1A chr11 68754620 68844410 - protein_coding KNOWN OTTHUMG00000167892.4 89791 6565 93 ENSG00000250508.1 RP11-757G1.6 chr11 68870664 68874542 + lincRNA NOVEL OTTHUMG00000173014.1 3879 3252 2 ENSG00000197345.11 MRPL21 chr11 68891276 68903835 - protein_coding KNOWN OTTHUMG00000167893.3 12560 2825 47 ENSG00000132740.7 IGHMBP2 chr11 68903842 68940602 + protein_coding KNOWN OTTHUMG00000167894.2 36761 6465 55 ENSG00000255741.1 RP11-757G1.5 chr11 68941503 68942852 - antisense NOVEL OTTHUMG00000167895.1 1350 569 2 ENSG00000172938.3 MRGPRD chr11 68980021 68980986 - protein_coding KNOWN OTTHUMG00000167896.1 966 966 1 ENSG00000261625.1 RP11-554A11.4 chr11 69000765 69002048 - sense_overlapping NOVEL OTTHUMG00000172938.1 1284 1284 1 ENSG00000261276.1 RP11-554A11.5 chr11 69004394 69005100 + antisense NOVEL OTTHUMG00000172939.1 707 366 2 ENSG00000172935.8 MRGPRF chr11 69004395 69013409 - protein_coding KNOWN OTTHUMG00000167897.1 9015 2746 8 ENSG00000256508.2 MRGPRF-AS1 chr11 69012283 69018447 + antisense NOVEL OTTHUMG00000172940.1 6165 2137 10 ENSG00000228150.1 RP11-84A14.4 chr1 9942923 9949974 + sense_intronic NOVEL OTTHUMG00000001805.1 7052 440 2 ENSG00000169291.8 SHE chr1 154469772 154502113 - protein_coding KNOWN OTTHUMG00000036072.3 32342 8441 11 ENSG00000162341.14 TPCN2 chr11 69048897 69090604 + protein_coding KNOWN OTTHUMG00000167898.3 41708 6130 77 ENSG00000265539.1 MIR3164 chr11 69083176 69083258 + miRNA KNOWN NA 83 83 1 ENSG00000260895.1 RP11-554A11.7 chr11 69103493 69109094 + lincRNA NOVEL OTTHUMG00000172941.1 5602 622 2 ENSG00000261070.1 RP11-554A11.8 chr11 69147228 69171564 - lincRNA NOVEL OTTHUMG00000172973.1 24337 990 3 ENSG00000259799.1 RP11-554A11.9 chr11 69155910 69159752 + antisense NOVEL OTTHUMG00000172974.1 3843 778 4 ENSG00000172927.6 MYEOV chr11 69294138 69367726 + protein_coding KNOWN OTTHUMG00000167836.4 73589 3760 33 ENSG00000213275.2 IFITM9P chr11 69303412 69303807 - processed_pseudogene KNOWN OTTHUMG00000167860.1 396 396 1 ENSG00000260877.1 RP11-211G23.2 chr11 69371463 69372511 + lincRNA NOVEL OTTHUMG00000175507.1 1049 371 2 ENSG00000259854.1 RP11-211G23.1 chr11 69414307 69416832 + lincRNA NOVEL OTTHUMG00000175508.1 2526 2424 2 ENSG00000255980.1 AP000439.1 chr11 69425690 69429621 + lincRNA NOVEL OTTHUMG00000168000.1 3932 2376 2 ENSG00000273110.1 RP11-350G8.9 chr1 154480012 154481501 + antisense NOVEL OTTHUMG00000186422.1 1490 681 2 ENSG00000255606.1 AP000439.2 chr11 69438365 69444743 - lincRNA NOVEL OTTHUMG00000168001.1 6379 581 2 ENSG00000261347.1 AP000439.5 chr11 69467598 69469705 + lincRNA NOVEL OTTHUMG00000175569.1 2108 664 2 ENSG00000255774.1 AP000439.3 chr11 69477133 69479940 - lincRNA NOVEL OTTHUMG00000168002.1 2808 726 2 ENSG00000110092.3 CCND1 chr11 69641087 69654474 + protein_coding KNOWN OTTHUMG00000167877.3 13388 4830 16 ENSG00000149716.11 ORAOV1 chr11 69653076 69675416 - protein_coding KNOWN OTTHUMG00000167885.6 22341 7872 70 ENSG00000281781.1 AP001888.1 chr11 69671952 69672075 + protein_coding NOVEL NA 124 42 2 ENSG00000162344.3 FGF19 chr11 69698232 69704642 - protein_coding KNOWN OTTHUMG00000167886.1 6411 2447 3 ENSG00000256441.1 RP11-300I6.5 chr11 69737298 69738017 - processed_pseudogene KNOWN OTTHUMG00000168003.1 720 720 1 ENSG00000075388.3 FGF4 chr11 69771016 69775403 - protein_coding KNOWN OTTHUMG00000167887.3 4388 3233 5 ENSG00000186895.2 FGF3 chr11 69810224 69819024 - protein_coding KNOWN OTTHUMG00000167888.1 8801 892 3 ENSG00000163239.11 TDRD10 chr1 154502219 154548147 + protein_coding KNOWN OTTHUMG00000037264.3 45929 2706 43 ENSG00000260348.1 RP11-643C9.1 chr11 69909184 69910994 - lincRNA NOVEL OTTHUMG00000175910.1 1811 385 2 ENSG00000260679.1 RP11-643C9.2 chr11 69921638 69926813 - lincRNA NOVEL OTTHUMG00000175911.1 5176 299 2 ENSG00000255191.1 RP11-626H12.1 chr11 69985876 70015815 + lincRNA NOVEL OTTHUMG00000167159.1 29940 432 2 ENSG00000254605.1 RP11-626H12.2 chr11 70014858 70021059 - lincRNA NOVEL OTTHUMG00000167160.1 6202 679 5 ENSG00000248844.5 RP11-626H12.3 chr11 70056230 70065371 - lincRNA NOVEL OTTHUMG00000167161.1 9142 1995 4 ENSG00000254417.1 ANO1-AS2 chr11 70072434 70075433 - antisense NOVEL OTTHUMG00000167162.1 3000 1004 5 ENSG00000202070.1 RNU6-1175P chr11 70075363 70075469 + snRNA KNOWN NA 107 107 1 ENSG00000131620.16 ANO1 chr11 70078302 70189528 + protein_coding KNOWN OTTHUMG00000167204.1 111227 6021 126 ENSG00000255143.1 RP11-805J14.3 chr11 70129297 70149623 + sense_overlapping NOVEL OTTHUMG00000167197.2 20327 497 2 ENSG00000254902.1 ANO1-AS1 chr11 70187788 70188509 - antisense NOVEL OTTHUMG00000167205.1 722 646 2 ENSG00000160714.8 UBE2Q1 chr1 154548577 154559028 - protein_coding KNOWN OTTHUMG00000037265.2 10452 4161 39 ENSG00000168040.4 FADD chr11 70203163 70207390 + protein_coding KNOWN OTTHUMG00000167264.1 4228 1841 2 ENSG00000254721.1 RP11-805J14.5 chr11 70206291 70207390 - antisense NOVEL OTTHUMG00000167265.1 1100 1011 4 ENSG00000131626.14 PPFIA1 chr11 70270700 70384403 + protein_coding KNOWN OTTHUMG00000167266.2 113704 10467 205 ENSG00000255329.1 H2AFZP4 chr11 70278921 70279297 - processed_pseudogene KNOWN OTTHUMG00000167302.1 377 377 1 ENSG00000254604.1 AP000487.6 chr11 70282367 70363368 - antisense NOVEL OTTHUMG00000167273.1 81002 539 2 ENSG00000221333.1 MIR548K chr11 70283955 70284070 + miRNA KNOWN NA 116 116 1 ENSG00000254484.1 CTA-797E19.1 chr11 70319928 70321415 + sense_intronic NOVEL OTTHUMG00000167267.1 1488 422 2 ENSG00000255539.1 CTA-797E19.2 chr11 70324871 70327209 - antisense NOVEL OTTHUMG00000167268.1 2339 367 2 ENSG00000254495.1 AP000487.4 chr11 70358198 70358677 - antisense NOVEL OTTHUMG00000167269.1 480 394 2 ENSG00000246889.2 AP000487.5 chr11 70372246 70398488 - antisense NOVEL OTTHUMG00000167270.2 26243 3078 6 ENSG00000229780.1 UBE2Q1-AS1 chr1 154553609 154555017 + antisense NOVEL OTTHUMG00000037263.1 1409 432 2 ENSG00000085733.14 CTTN chr11 70398404 70436584 + protein_coding KNOWN OTTHUMG00000134307.3 38181 6949 109 ENSG00000162105.15 SHANK2 chr11 70467856 71252577 - protein_coding KNOWN OTTHUMG00000154615.6 784722 18604 169 ENSG00000227726.1 AP001271.3 chr11 70477277 70477592 - sense_intronic NOVEL OTTHUMG00000152739.1 316 206 2 ENSG00000279459.1 RP11-826F13.1 chr11 70603304 70604859 + TEC KNOWN OTTHUMG00000188669.1 1556 1556 1 ENSG00000226627.1 SHANK2-AS1 chr11 70631094 70635490 + antisense NOVEL OTTHUMG00000154610.1 4397 2252 3 ENSG00000236262.1 SHANK2-AS2 chr11 70646165 70647562 + antisense NOVEL OTTHUMG00000152738.1 1398 356 2 ENSG00000207196.1 Y_RNA chr11 70705167 70705269 - misc_RNA NOVEL NA 103 103 1 ENSG00000280089.1 CMB9-52H4.1 chr11 70705605 70706068 - TEC KNOWN OTTHUMG00000188670.1 464 464 1 ENSG00000171671.6 SHANK2-AS3 chr11 70862790 70865115 + antisense KNOWN OTTHUMG00000150217.1 2326 1683 3 ENSG00000263744.1 MIR3664 chr11 70872270 70872368 - miRNA KNOWN NA 99 99 1 ENSG00000160716.4 CHRNB2 chr1 154567781 154580026 + protein_coding KNOWN OTTHUMG00000037262.2 12246 5867 6 ENSG00000172900.10 FLJ42102 chr11 71382601 71423423 - unitary_pseudogene KNOWN OTTHUMG00000155911.1 40823 3496 14 ENSG00000172893.14 DHCR7 chr11 71428193 71452868 - protein_coding KNOWN OTTHUMG00000167346.2 24676 4160 59 ENSG00000254682.1 RP11-660L16.2 chr11 71448674 71452157 + antisense NOVEL OTTHUMG00000167347.1 3484 680 2 ENSG00000172890.10 NADSYN1 chr11 71453109 71524107 + protein_coding KNOWN OTTHUMG00000167375.2 70999 16263 147 ENSG00000278349.1 MIR6754 chr11 71473503 71473568 + miRNA KNOWN NA 66 66 1 ENSG00000254924.2 RP11-684B2.3 chr11 71506061 71506380 - processed_pseudogene KNOWN OTTHUMG00000167389.2 320 320 1 ENSG00000204572.7 KRTAP5-10 chr11 71527263 71568934 + protein_coding KNOWN OTTHUMG00000057585.2 41672 1993 13 ENSG00000244411.3 KRTAP5-7 chr11 71527267 71528674 + protein_coding KNOWN OTTHUMG00000057570.1 1408 1408 1 ENSG00000241233.2 KRTAP5-8 chr11 71527301 71549167 + protein_coding KNOWN OTTHUMG00000057571.1 21867 1566 7 ENSG00000254997.3 KRTAP5-9 chr11 71548418 71549553 + protein_coding KNOWN OTTHUMG00000167263.2 1136 1136 1 ENSG00000233875.1 RP11-61L14.6 chr1 154579065 154579663 - antisense NOVEL OTTHUMG00000041315.1 599 321 2 ENSG00000248903.1 AP000867.14 chr11 71568680 71568934 + processed_pseudogene KNOWN OTTHUMG00000057587.2 255 255 1 ENSG00000204571.5 KRTAP5-11 chr11 71579714 71603353 - protein_coding KNOWN OTTHUMG00000057586.2 23640 1523 9 ENSG00000249387.1 KRTAP5-14P chr11 71579728 71579848 - processed_pseudogene KNOWN OTTHUMG00000057584.1 121 121 1 ENSG00000184055.4 OR7E87P chr11 71593454 71594382 + unprocessed_pseudogene KNOWN OTTHUMG00000057593.2 929 929 1 ENSG00000255562.2 UNC93B6 chr11 71603260 71608040 + transcribed_processed_pseudogene KNOWN OTTHUMG00000167455.2 4781 1144 6 ENSG00000255261.1 OR7E4P chr11 71620020 71621032 + unprocessed_pseudogene KNOWN OTTHUMG00000167456.1 1013 1013 1 ENSG00000255415.1 RP11-684B2.5 chr11 71629045 71629421 + processed_pseudogene KNOWN OTTHUMG00000167457.1 377 377 1 ENSG00000221458.1 AP003498.1 chr11 71662547 71662695 - miRNA NOVEL NA 149 149 1 ENSG00000239481.1 RPS3AP41 chr11 71669520 71670297 + processed_pseudogene KNOWN OTTHUMG00000158403.1 778 778 1 ENSG00000254805.1 SNRPCP14 chr11 71690453 71690657 - processed_pseudogene KNOWN OTTHUMG00000167459.1 205 205 1 ENSG00000160710.14 ADAR chr1 154582062 154627999 - protein_coding KNOWN OTTHUMG00000037261.3 45938 8356 61 ENSG00000254972.1 RP11-167J8.3 chr11 71701268 71705404 - lincRNA NOVEL OTTHUMG00000167460.1 4137 347 3 ENSG00000255319.4 ENPP7P8 chr11 71711740 71781183 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000167461.1 69444 1607 10 ENSG00000158483.14 FAM86C1 chr11 71787510 71801236 + protein_coding KNOWN OTTHUMG00000160552.5 13727 2972 28 ENSG00000248671.6 ALG1L9P chr11 71794363 71818238 - processed_transcript NOVEL OTTHUMG00000167480.2 23876 3675 13 ENSG00000254978.2 ALG1L9P chr11 71800541 71804640 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000167481.1 4100 549 4 ENSG00000264091.1 AP002495.1 chr11 71802585 71802649 - miRNA NOVEL NA 65 65 1 ENSG00000214534.4 ZNF705E chr11 71814045 71821548 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000167482.1 7504 3463 9 ENSG00000184276.2 DEFB108B chr11 71833200 71837710 + protein_coding KNOWN OTTHUMG00000167533.1 4511 666 5 ENSG00000252902.1 RNA5SP342 chr11 71845196 71845245 - rRNA KNOWN NA 50 50 1 ENSG00000255157.1 CTD-2313N18.8 chr11 71856277 71863658 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000167534.1 7382 240 4 ENSG00000278405.1 AL606500.1 chr1 154610493 154610586 - miRNA NOVEL NA 94 94 1 ENSG00000254469.6 RP11-849H4.2 chr11 71865509 71928654 - protein_coding NOVEL OTTHUMG00000167535.4 63146 3651 36 ENSG00000225805.4 CTD-2313N18.7 chr11 71878453 71884561 + protein_coding KNOWN OTTHUMG00000167536.2 6109 213 2 ENSG00000228915.3 OR7E128P chr11 71893410 71894433 + unprocessed_pseudogene KNOWN OTTHUMG00000167537.1 1024 1024 1 ENSG00000254593.1 OR7E126P chr11 71903194 71904081 + unprocessed_pseudogene KNOWN OTTHUMG00000167538.1 888 888 1 ENSG00000266859.1 AP000719.1 chr11 71905107 71905194 + miRNA NOVEL NA 88 88 1 ENSG00000137522.16 RNF121 chr11 71928701 71997597 + protein_coding KNOWN OTTHUMG00000157023.3 68897 3567 86 ENSG00000255296.1 RP11-757C15.4 chr11 71938671 71939544 - processed_pseudogene KNOWN OTTHUMG00000167539.1 874 560 2 ENSG00000137496.16 IL18BP chr11 71998541 72005715 + protein_coding KNOWN OTTHUMG00000133713.5 7175 4323 70 ENSG00000137497.16 NUMA1 chr11 72002864 72080693 - protein_coding KNOWN OTTHUMG00000167697.3 77830 15224 367 ENSG00000251143.1 RP11-849H4.4 chr11 72014291 72020910 + antisense NOVEL OTTHUMG00000167782.1 6620 4233 4 ENSG00000143603.17 KCNN3 chr1 154697455 154870280 - protein_coding KNOWN OTTHUMG00000037260.3 172826 13598 36 ENSG00000263742.1 MIR3165 chr11 72072228 72072302 - miRNA KNOWN NA 75 75 1 ENSG00000212089.1 AP002490.1 chr11 72078330 72078420 - miRNA NOVEL NA 91 91 1 ENSG00000184154.11 LRTOMT chr11 72080331 72110782 + protein_coding KNOWN OTTHUMG00000154887.6 30452 6144 114 ENSG00000149357.8 LAMTOR1 chr11 72085895 72103387 - protein_coding KNOWN OTTHUMG00000167869.1 17493 2778 34 ENSG00000110200.7 ANAPC15 chr11 72106378 72112780 - protein_coding KNOWN OTTHUMG00000167865.1 6403 2883 88 ENSG00000110203.7 FOLR3 chr11 72114869 72139892 + protein_coding KNOWN OTTHUMG00000167870.4 25024 1396 25 ENSG00000257075.1 RPEP6 chr11 72131282 72131907 + processed_pseudogene KNOWN OTTHUMG00000167872.1 626 626 1 ENSG00000256518.2 RP11-807H22.5 chr11 72158822 72159861 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000167873.2 1040 741 6 ENSG00000204971.3 RP11-807H22.7 chr11 72163322 72209241 - antisense NOVEL OTTHUMG00000167874.1 45920 477 3 ENSG00000255860.2 RP11-807H22.6 chr11 72172439 72178042 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000167875.1 5604 829 8 ENSG00000173614.12 NMNAT1 chr1 9943428 9985501 + protein_coding KNOWN OTTHUMG00000001799.6 42074 4610 20 ENSG00000163344.5 PMVK chr1 154924734 154936991 - protein_coding KNOWN OTTHUMG00000037415.1 12258 1280 5 ENSG00000110195.10 FOLR1 chr11 72189558 72196301 + protein_coding KNOWN OTTHUMG00000167876.1 6744 1577 20 ENSG00000165457.12 FOLR2 chr11 72216601 72221950 + protein_coding KNOWN OTTHUMG00000150394.2 5350 1416 50 ENSG00000165458.12 INPPL1 chr11 72223701 72239105 + protein_coding KNOWN OTTHUMG00000167879.2 15405 6519 135 ENSG00000165462.5 PHOX2A chr11 72239077 72245664 - protein_coding KNOWN OTTHUMG00000167899.1 6588 1784 8 ENSG00000228286.3 AP000593.5 chr11 72249856 72251288 - processed_pseudogene KNOWN OTTHUMG00000167900.1 1433 1433 1 ENSG00000213365.3 AP000593.6 chr11 72280151 72281178 + processed_pseudogene KNOWN OTTHUMG00000167901.1 1028 712 2 ENSG00000162129.11 CLPB chr11 72292425 72434680 - protein_coding KNOWN OTTHUMG00000167902.4 142256 4264 159 ENSG00000255843.1 AP000593.7 chr11 72302139 72302965 + antisense NOVEL OTTHUMG00000167903.1 827 578 2 ENSG00000256739.1 RP11-45F15.1 chr11 72351347 72353210 + antisense NOVEL OTTHUMG00000167904.1 1864 560 2 ENSG00000255672.1 RP11-45F15.2 chr11 72354516 72363555 + antisense NOVEL OTTHUMG00000167905.1 9040 550 3 ENSG00000270361.1 RP11-307C12.13 chr1 154937370 154938059 + lincRNA NOVEL OTTHUMG00000185167.1 690 690 1 ENSG00000256403.1 RP11-7N14.1 chr11 72410716 72412079 + antisense NOVEL OTTHUMG00000167906.1 1364 492 2 ENSG00000237408.1 ART2BP chr11 72478221 72479237 + unitary_pseudogene KNOWN OTTHUMG00000154241.1 1017 499 2 ENSG00000238048.1 ART2P chr11 72519986 72521733 + unprocessed_pseudogene KNOWN OTTHUMG00000154242.1 1748 822 2 ENSG00000276109.1 RP11-169D4.3 chr11 72551049 72551919 - processed_pseudogene KNOWN OTTHUMG00000187773.1 871 560 2 ENSG00000274664.1 RP11-169D4.4 chr11 72562044 72562554 + processed_pseudogene KNOWN OTTHUMG00000187775.1 511 511 1 ENSG00000227467.3 LINC01537 chr11 72570660 72573229 + lincRNA NOVEL OTTHUMG00000167927.1 2570 2450 2 ENSG00000186642.14 PDE2A chr11 72576141 72674591 - protein_coding KNOWN OTTHUMG00000102045.4 98451 7182 314 ENSG00000256633.1 RP11-169D4.2 chr11 72584572 72587979 + antisense NOVEL OTTHUMG00000167928.1 3408 664 2 ENSG00000272036.1 MIR139 chr11 72615063 72615130 - miRNA KNOWN NA 68 68 1 ENSG00000251919.1 RNU7-105P chr11 72621766 72621827 + snRNA KNOWN NA 62 62 1 ENSG00000163346.15 PBXIP1 chr1 154944076 154956123 - protein_coding KNOWN OTTHUMG00000037369.5 12048 3851 48 ENSG00000255808.1 RP11-31L22.3 chr11 72643237 72659407 + antisense NOVEL OTTHUMG00000167929.1 16171 562 4 ENSG00000186635.13 ARAP1 chr11 72685069 72793599 - protein_coding KNOWN OTTHUMG00000157102.3 108531 9056 324 ENSG00000256007.1 ARAP1-AS1 chr11 72685075 72693808 + antisense NOVEL OTTHUMG00000167950.1 8734 388 2 ENSG00000245148.2 ARAP1-AS2 chr11 72700474 72705607 + antisense NOVEL OTTHUMG00000167951.1 5134 1824 2 ENSG00000244134.1 RPS12P20 chr11 72708186 72708565 + processed_pseudogene KNOWN OTTHUMG00000158404.1 380 380 1 ENSG00000214530.6 STARD10 chr11 72754729 72794168 - protein_coding KNOWN OTTHUMG00000167954.1 39440 4197 105 ENSG00000202522.1 Y_RNA chr11 72766004 72766116 + misc_RNA NOVEL NA 113 113 1 ENSG00000265064.1 MIR4692 chr11 72783530 72783592 + miRNA KNOWN NA 63 63 1 ENSG00000168010.9 ATG16L2 chr11 72814308 72843674 + protein_coding KNOWN OTTHUMG00000167961.1 29367 8617 174 ENSG00000137478.13 FCHSD2 chr11 72836745 73142261 - protein_coding KNOWN OTTHUMG00000153082.5 305517 5188 116 ENSG00000268154.2 Metazoa_SRP chr1 154950210 154950492 - misc_RNA NOVEL NA 283 283 1 ENSG00000206638.1 RNU6-672P chr11 72869544 72869650 - snRNA KNOWN NA 107 107 1 ENSG00000234751.1 AP002381.2 chr11 72940498 72941112 + processed_pseudogene KNOWN OTTHUMG00000153085.1 615 615 1 ENSG00000256568.1 RP11-800A3.3 chr11 73176694 73181696 + lincRNA NOVEL OTTHUMG00000167964.1 5003 618 2 ENSG00000215841.3 RP11-800A3.2 chr11 73214998 73215913 - antisense NOVEL OTTHUMG00000167965.1 916 262 2 ENSG00000175591.10 P2RY2 chr11 73218298 73236352 + protein_coding KNOWN OTTHUMG00000167966.1 18055 2861 9 ENSG00000260401.1 RP11-800A3.4 chr11 73238975 73242335 + sense_overlapping NOVEL OTTHUMG00000167967.1 3361 3361 1 ENSG00000256347.1 OR8R1P chr11 73248779 73249867 + unprocessed_pseudogene KNOWN OTTHUMG00000167968.1 1089 764 2 ENSG00000171631.13 P2RY6 chr11 73264505 73298617 + protein_coding KNOWN OTTHUMG00000167969.2 34113 3976 37 ENSG00000257038.1 RP11-800A3.7 chr11 73307235 73309361 - antisense NOVEL OTTHUMG00000167970.2 2127 1695 3 ENSG00000110237.3 ARHGEF17 chr11 73308289 73369091 + protein_coding KNOWN OTTHUMG00000167971.1 60803 9539 33 ENSG00000163348.3 PYGO2 chr1 154957026 154963853 - protein_coding KNOWN OTTHUMG00000037370.1 6828 3630 9 ENSG00000054967.11 RELT chr11 73376264 73397474 + protein_coding KNOWN OTTHUMG00000167973.2 21211 6322 46 ENSG00000256928.1 RP11-809N8.2 chr11 73395559 73396436 - antisense NOVEL OTTHUMG00000167992.1 878 752 2 ENSG00000054965.9 FAM168A chr11 73400487 73598189 - protein_coding KNOWN OTTHUMG00000167995.1 197703 7823 25 ENSG00000256448.4 RP11-809N8.4 chr11 73405297 73410682 + antisense NOVEL OTTHUMG00000167996.1 5386 344 5 ENSG00000255786.1 RP11-809N8.6 chr11 73452020 73452344 + processed_pseudogene KNOWN OTTHUMG00000167997.1 325 325 1 ENSG00000256148.1 RP11-809N8.5 chr11 73510658 73510820 + processed_pseudogene KNOWN OTTHUMG00000167998.1 163 163 1 ENSG00000231726.2 HMGN2P38 chr11 73580253 73580517 + processed_pseudogene KNOWN OTTHUMG00000167999.1 265 265 1 ENSG00000270323.1 AP000860.2 chr11 73640479 73641037 + processed_pseudogene KNOWN OTTHUMG00000184756.1 559 559 1 ENSG00000021300.12 PLEKHB1 chr11 73646178 73662819 + protein_coding KNOWN OTTHUMG00000168030.2 16642 4933 122 ENSG00000175582.18 RAB6A chr11 73675638 73761137 - protein_coding KNOWN OTTHUMG00000134308.5 85500 4896 61 ENSG00000271380.1 RP11-307C12.12 chr1 154961825 154962623 + antisense NOVEL OTTHUMG00000185142.1 799 799 1 ENSG00000255928.1 RP11-456I15.2 chr11 73722349 73722694 + antisense NOVEL OTTHUMG00000168035.1 346 210 2 ENSG00000256034.1 RP11-707G14.1 chr11 73760563 73761070 + antisense NOVEL OTTHUMG00000168031.1 508 428 2 ENSG00000175581.12 MRPL48 chr11 73787316 73865133 + protein_coding KNOWN OTTHUMG00000168048.2 77818 4386 91 ENSG00000199975.1 RN7SKP243 chr11 73832382 73832690 - misc_RNA KNOWN NA 309 309 1 ENSG00000256681.1 CCDC58P5 chr11 73850469 73851211 - processed_pseudogene KNOWN OTTHUMG00000168060.1 743 432 2 ENSG00000181924.6 COA4 chr11 73872667 73876988 - protein_coding KNOWN OTTHUMG00000168061.1 4322 2246 13 ENSG00000175575.11 PAAF1 chr11 73876699 73931124 + protein_coding KNOWN OTTHUMG00000168062.3 54426 7937 132 ENSG00000256898.1 RP11-707G14.8 chr11 73921665 73922196 - processed_pseudogene KNOWN OTTHUMG00000168066.1 532 532 1 ENSG00000187726.7 DNAJB13 chr11 73950319 73970366 + protein_coding KNOWN OTTHUMG00000168093.1 20048 3475 27 ENSG00000255847.4 RP11-167N4.2 chr11 73963657 73970287 - antisense NOVEL OTTHUMG00000168094.1 6631 1412 10 ENSG00000160691.17 SHC1 chr1 154962298 154974395 - protein_coding KNOWN OTTHUMG00000037295.5 12098 4342 93 ENSG00000175567.7 UCP2 chr11 73974667 73983307 - protein_coding KNOWN OTTHUMG00000168095.3 8641 3237 39 ENSG00000256189.1 RP11-167N4.5 chr11 73991283 73992180 - processed_pseudogene KNOWN OTTHUMG00000168107.1 898 898 1 ENSG00000256723.1 RP11-167N4.4 chr11 73994972 73996151 - processed_pseudogene KNOWN OTTHUMG00000168108.1 1180 1180 1 ENSG00000175564.11 UCP3 chr11 74000281 74009435 - protein_coding KNOWN OTTHUMG00000168109.1 9155 3684 17 ENSG00000168014.15 C2CD3 chr11 74012714 74171210 - protein_coding KNOWN OTTHUMG00000168110.1 158497 12571 155 ENSG00000256098.1 RP11-691F15.1 chr11 74142151 74142358 + processed_pseudogene KNOWN OTTHUMG00000168114.1 208 208 1 ENSG00000214517.7 PPME1 chr11 74171099 74254703 + protein_coding KNOWN OTTHUMG00000168115.4 83605 7917 72 ENSG00000200649.1 RNA5SP343 chr11 74198748 74198854 - rRNA KNOWN NA 107 107 1 ENSG00000280269.1 AP000577.2 chr11 74204869 74205746 + TEC KNOWN OTTHUMG00000168116.1 878 878 1 ENSG00000149380.10 P4HA3 chr11 74235801 74311657 - protein_coding KNOWN OTTHUMG00000165254.4 75857 4009 63 ENSG00000173207.11 CKS1B chr1 154974653 154979249 + protein_coding KNOWN OTTHUMG00000037413.3 4597 2338 19 ENSG00000206913.1 SNORA7 chr11 74252414 74252552 - snoRNA NOVEL NA 139 139 1 ENSG00000246211.2 RP11-632K5.3 chr11 74311362 74324705 + lincRNA NOVEL OTTHUMG00000168131.1 13344 2157 7 ENSG00000165434.7 PGM2L1 chr11 74330318 74398473 - protein_coding KNOWN OTTHUMG00000168132.1 68156 8820 15 ENSG00000212961.4 HNRNPA1P40 chr11 74354443 74355720 + processed_pseudogene KNOWN OTTHUMG00000168133.1 1278 1278 1 ENSG00000254631.4 RP11-702H23.4 chr11 74397549 74485742 + antisense NOVEL OTTHUMG00000165644.3 88194 681 7 ENSG00000264402.1 MIR548AL chr11 74399237 74399333 + miRNA KNOWN NA 97 97 1 ENSG00000255440.1 RP11-632K5.2 chr11 74409060 74416379 + sense_intronic NOVEL OTTHUMG00000165649.1 7320 639 2 ENSG00000175538.9 KCNE3 chr11 74454841 74467729 - protein_coding KNOWN OTTHUMG00000165641.1 12889 3677 21 ENSG00000254928.1 RP11-702H23.6 chr11 74455348 74456825 + antisense NOVEL OTTHUMG00000165642.1 1478 609 2 ENSG00000255444.1 CYCSP27 chr11 74482250 74482542 + processed_pseudogene KNOWN OTTHUMG00000165643.1 293 293 1 ENSG00000264349.1 MIR4258 chr1 154975693 154975783 + miRNA KNOWN NA 91 91 1 ENSG00000254974.1 RP11-702H23.2 chr11 74485580 74486051 - processed_pseudogene KNOWN OTTHUMG00000165645.1 472 472 1 ENSG00000175536.6 LIPT2 chr11 74491712 74493733 - protein_coding KNOWN OTTHUMG00000165646.1 2022 1187 6 ENSG00000254837.2 AP001372.2 chr11 74493366 74498533 + lincRNA NOVEL OTTHUMG00000150368.2 5168 2493 3 ENSG00000077514.7 POLD3 chr11 74493851 74669117 + protein_coding KNOWN OTTHUMG00000165621.2 175267 5508 65 ENSG00000254500.1 RANP3 chr11 74652636 74652911 + processed_pseudogene KNOWN OTTHUMG00000165622.1 276 276 1 ENSG00000223202.1 RN7SKP297 chr11 74685224 74685505 + misc_RNA KNOWN NA 282 282 1 ENSG00000054938.14 CHRDL2 chr11 74696429 74731385 - protein_coding KNOWN OTTHUMG00000165623.1 34957 3135 79 ENSG00000279353.1 RP11-864N7.4 chr11 74698231 74699658 - TEC KNOWN OTTHUMG00000165624.1 1428 1428 1 ENSG00000265902.1 MIR4696 chr11 74720268 74720337 - miRNA KNOWN NA 70 70 1 ENSG00000241097.2 RP11-864N7.1 chr11 74738478 74738796 - processed_pseudogene KNOWN OTTHUMG00000158405.2 319 319 1 ENSG00000160688.17 FLAD1 chr1 154983338 154993111 + protein_coding KNOWN OTTHUMG00000037416.1 9774 4019 53 ENSG00000227615.1 RP11-864N7.2 chr11 74745716 74746114 - processed_pseudogene KNOWN OTTHUMG00000158412.1 399 399 1 ENSG00000166439.5 RNF169 chr11 74748868 74842413 + protein_coding KNOWN OTTHUMG00000165516.2 93546 7823 8 ENSG00000264095.1 AP000560.1 chr11 74753474 74753584 - miRNA NOVEL NA 111 111 1 ENSG00000166435.14 XRRA1 chr11 74807739 74949200 - protein_coding KNOWN OTTHUMG00000165515.2 141462 9086 153 ENSG00000278879.1 AP000560.3 chr11 74830574 74832510 - TEC KNOWN OTTHUMG00000165536.1 1937 1937 1 ENSG00000242999.3 RN7SL239P chr11 74845910 74846209 + misc_RNA KNOWN NA 300 300 1 ENSG00000241170.2 RP11-147I3.1 chr11 74876286 74920022 + transcribed_processed_pseudogene KNOWN OTTHUMG00000158413.2 43737 1532 12 ENSG00000265344.1 AP001992.1 chr11 74945981 74946078 - miRNA NOVEL NA 98 98 1 ENSG00000118363.10 SPCS2 chr11 74949247 74979031 + protein_coding KNOWN OTTHUMG00000165517.1 29785 2982 34 ENSG00000200152.1 RNU6-216P chr11 74968189 74968292 - snRNA KNOWN NA 104 104 1 ENSG00000202415.1 RN7SKP269 chr1 9947318 9947636 + misc_RNA KNOWN NA 319 319 1 ENSG00000163352.5 LENEP chr1 154993586 154994315 + protein_coding KNOWN OTTHUMG00000037417.3 730 730 3 ENSG00000162139.8 NEU3 chr11 74988134 75018893 + protein_coding KNOWN OTTHUMG00000165518.2 30760 7556 21 ENSG00000234611.1 OR2AT2P chr11 75071148 75072052 - unitary_pseudogene KNOWN OTTHUMG00000154334.1 905 905 1 ENSG00000213333.3 NPM1P50 chr11 75079265 75080131 - processed_pseudogene KNOWN OTTHUMG00000165369.1 867 867 1 ENSG00000171561.3 OR2AT4 chr11 75088713 75089754 - protein_coding KNOWN OTTHUMG00000165370.1 1042 1042 1 ENSG00000255395.1 CTD-2562J17.2 chr11 75099172 75140148 - antisense NOVEL OTTHUMG00000165419.1 40977 560 4 ENSG00000137491.13 SLCO2B1 chr11 75100563 75206549 + protein_coding KNOWN OTTHUMG00000165420.3 105987 10351 107 ENSG00000254475.1 OR2AT1P chr11 75131138 75131880 - unprocessed_pseudogene KNOWN OTTHUMG00000165421.1 743 743 1 ENSG00000255136.2 CTD-2562J17.4 chr11 75208054 75241173 - lincRNA NOVEL OTTHUMG00000165439.2 33120 862 10 ENSG00000255460.1 ZDHHC20P3 chr11 75228322 75228657 - processed_pseudogene KNOWN OTTHUMG00000165440.1 336 336 1 ENSG00000261594.3 TPBGL chr11 75240905 75243697 + protein_coding KNOWN OTTHUMG00000165441.2 2793 2793 1 ENSG00000160685.12 ZBTB7B chr1 155002630 155018522 + protein_coding KNOWN OTTHUMG00000037414.1 15893 4303 23 ENSG00000254429.1 CTD-2562J17.7 chr11 75260127 75261025 + antisense NOVEL OTTHUMG00000165442.1 899 506 2 ENSG00000279117.1 CTD-2562J17.6 chr11 75260129 75262466 - TEC KNOWN OTTHUMG00000165443.1 2338 2338 1 ENSG00000137486.15 ARRB1 chr11 75264182 75351705 - protein_coding KNOWN OTTHUMG00000165444.3 87524 5828 89 ENSG00000254963.1 CTD-2562J17.9 chr11 75264289 75265170 + antisense NOVEL OTTHUMG00000165447.1 882 216 2 ENSG00000199090.1 MIR326 chr11 75335092 75335186 - miRNA KNOWN NA 95 95 1 ENSG00000149273.13 RPS3 chr11 75399486 75422280 + protein_coding KNOWN OTTHUMG00000165448.2 22795 5894 109 ENSG00000206941.1 SNORD15A chr11 75400391 75400538 + snoRNA KNOWN NA 148 148 1 ENSG00000207445.1 SNORD15B chr11 75404421 75404566 + snoRNA KNOWN NA 146 146 1 ENSG00000149243.14 KLHL35 chr11 75422394 75430629 - protein_coding KNOWN OTTHUMG00000133573.3 8236 5041 20 ENSG00000158555.13 GDPD5 chr11 75434640 75525903 - protein_coding KNOWN OTTHUMG00000165484.1 91264 9867 150 ENSG00000163354.13 DCST2 chr1 155018520 155033781 - protein_coding KNOWN OTTHUMG00000037371.8 15262 3071 50 ENSG00000281259.1 AP002815.1 chr11 75491459 75491563 + miRNA NOVEL NA 105 105 1 ENSG00000254460.1 RP11-939C17.4 chr11 75506937 75508391 - sense_intronic NOVEL OTTHUMG00000165485.1 1455 386 2 ENSG00000149257.12 SERPINH1 chr11 75562056 75572783 + protein_coding KNOWN OTTHUMG00000165362.4 10728 4914 56 ENSG00000255326.1 CTD-2530H12.4 chr11 75583196 75594665 + antisense NOVEL OTTHUMG00000165342.1 11470 651 2 ENSG00000171533.10 MAP6 chr11 75586918 75669120 - protein_coding KNOWN OTTHUMG00000165343.2 82203 6433 13 ENSG00000255434.1 CTD-2530H12.8 chr11 75596144 75597270 - sense_intronic NOVEL OTTHUMG00000165348.1 1127 546 2 ENSG00000254630.1 CTD-2530H12.7 chr11 75635883 75638587 - sense_intronic NOVEL OTTHUMG00000165349.1 2705 390 2 ENSG00000255280.1 CTD-2530H12.5 chr11 75642600 75642889 + processed_pseudogene KNOWN OTTHUMG00000165344.2 290 290 1 ENSG00000166391.13 MOGAT2 chr11 75717819 75732958 + protein_coding KNOWN OTTHUMG00000165341.1 15140 4139 17 ENSG00000263993.2 RN7SL786P chr11 75742129 75742426 + misc_RNA KNOWN NA 298 298 1 ENSG00000163357.9 DCST1 chr1 155033824 155050930 + protein_coding KNOWN OTTHUMG00000041314.2 17107 3193 67 ENSG00000281528.1 AP001922.1 chr11 75742270 75742331 + miRNA NOVEL NA 62 62 1 ENSG00000247867.2 CTD-2530H12.1 chr11 75758455 75768647 - antisense NOVEL OTTHUMG00000165337.1 10193 1504 4 ENSG00000062282.13 DGAT2 chr11 75759512 75801535 + protein_coding KNOWN OTTHUMG00000165338.2 42024 7905 47 ENSG00000254826.1 CTD-2530H12.2 chr11 75775904 75776929 + sense_intronic NOVEL OTTHUMG00000165339.1 1026 842 2 ENSG00000254814.1 RP11-535A19.1 chr11 75800877 75803415 - antisense NOVEL OTTHUMG00000165317.1 2539 758 3 ENSG00000255507.4 RP11-535A19.2 chr11 75803431 75815406 - antisense NOVEL OTTHUMG00000165318.1 11976 1526 18 ENSG00000198382.7 UVRAG chr11 75815167 76143195 + protein_coding KNOWN OTTHUMG00000165319.2 328029 6352 71 ENSG00000200256.1 Y_RNA chr11 75835215 75835323 - misc_RNA NOVEL NA 109 109 1 ENSG00000199362.1 Y_RNA chr11 75837544 75837645 - misc_RNA NOVEL NA 102 102 1 ENSG00000255255.1 PPP1R1AP1 chr11 75911204 75911628 - processed_pseudogene KNOWN OTTHUMG00000165320.1 425 425 1 ENSG00000232093.1 RP11-307C12.11 chr1 155045191 155046118 - antisense NOVEL OTTHUMG00000041316.1 928 822 2 ENSG00000255081.1 RP11-263C24.1 chr11 75914201 75915213 + sense_intronic NOVEL OTTHUMG00000165321.1 1013 471 2 ENSG00000223013.1 RNA5SP344 chr11 75934936 75935039 + rRNA KNOWN NA 104 104 1 ENSG00000254915.1 RP11-263C24.3 chr11 75942129 75942435 - processed_pseudogene KNOWN OTTHUMG00000165350.1 307 307 1 ENSG00000255421.1 CTD-2011F17.2 chr11 76137315 76137731 - antisense NOVEL OTTHUMG00000165322.1 417 285 2 ENSG00000085741.11 WNT11 chr11 76186325 76210736 - protein_coding KNOWN OTTHUMG00000165264.2 24412 2401 16 ENSG00000254933.1 RP11-619A14.2 chr11 76190725 76195071 + antisense NOVEL OTTHUMG00000165265.1 4347 613 2 ENSG00000255362.1 RP11-619A14.3 chr11 76210956 76216025 - lincRNA NOVEL OTTHUMG00000165266.1 5070 388 3 ENSG00000137492.6 PRKRIR chr11 76349956 76380971 - protein_coding KNOWN OTTHUMG00000165280.1 31016 7727 22 ENSG00000179240.7 RP11-111M22.2 chr11 76381313 76414619 + protein_coding NOVEL OTTHUMG00000165281.1 33307 10972 16 ENSG00000272301.1 RP11-111M22.4 chr11 76389648 76390128 + lincRNA NOVEL OTTHUMG00000185367.1 481 481 1 ENSG00000143537.12 ADAM15 chr1 155050566 155062775 + protein_coding KNOWN OTTHUMG00000013898.5 12210 6584 404 ENSG00000271757.1 RP11-111M22.5 chr11 76392196 76392905 + lincRNA NOVEL OTTHUMG00000185368.1 710 710 1 ENSG00000201756.1 Y_RNA chr11 76404140 76404252 - misc_RNA NOVEL NA 113 113 1 ENSG00000255135.3 RP11-111M22.3 chr11 76441338 76444656 - lincRNA NOVEL OTTHUMG00000165292.2 3319 754 4 ENSG00000158636.15 C11orf30 chr11 76444923 76553025 + protein_coding KNOWN OTTHUMG00000165282.4 108103 11783 187 ENSG00000254755.1 RP11-672A2.7 chr11 76591023 76591211 + processed_pseudogene KNOWN OTTHUMG00000165257.1 189 189 1 ENSG00000255479.1 RP11-672A2.6 chr11 76625462 76626834 - lincRNA NOVEL OTTHUMG00000165258.1 1373 831 2 ENSG00000255363.1 RP11-672A2.5 chr11 76628096 76630363 - lincRNA NOVEL OTTHUMG00000165259.1 2268 559 2 ENSG00000254810.1 RP11-672A2.4 chr11 76654169 76656712 - lincRNA NOVEL OTTHUMG00000165260.1 2544 651 2 ENSG00000236304.1 AP001189.4 chr11 76657056 76663866 + antisense NOVEL OTTHUMG00000150349.1 6811 1426 3 ENSG00000137507.10 LRRC32 chr11 76657524 76670747 - protein_coding KNOWN OTTHUMG00000133687.3 13224 4459 15 ENSG00000243364.6 EFNA4 chr1 155063731 155069553 + protein_coding KNOWN OTTHUMG00000035309.3 5823 1263 12 ENSG00000254975.1 RP11-672A2.3 chr11 76675079 76703195 + lincRNA NOVEL OTTHUMG00000165261.2 28117 452 3 ENSG00000204529.3 GUCY2EP chr11 76694043 76707641 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000165247.2 13599 1049 8 ENSG00000254761.1 RP11-672A2.1 chr11 76712396 76719608 - lincRNA NOVEL OTTHUMG00000165236.1 7213 832 2 ENSG00000254632.1 RP11-21L23.4 chr11 76759916 76768223 - antisense NOVEL OTTHUMG00000165237.1 8308 538 2 ENSG00000182704.7 TSKU chr11 76782251 76798154 + protein_coding KNOWN OTTHUMG00000165238.1 15904 4131 10 ENSG00000255100.1 RP11-21L23.3 chr11 76782581 76783062 - antisense NOVEL OTTHUMG00000165239.1 482 354 6 ENSG00000261578.1 RP11-21L23.2 chr11 76800364 76804555 + sense_overlapping NOVEL OTTHUMG00000165240.1 4192 4192 1 ENSG00000078124.10 ACER3 chr11 76860867 77026797 + protein_coding KNOWN OTTHUMG00000165225.2 165931 8442 130 ENSG00000212030.1 AP002498.1 chr11 76878232 76878318 + miRNA NOVEL NA 87 87 1 ENSG00000254988.1 CTD-2547H18.1 chr11 76955417 76978619 - antisense NOVEL OTTHUMG00000165241.1 23203 568 3 ENSG00000251246.1 RP11-540D14.8 chr1 155063748 155086807 + protein_coding PUTATIVE OTTHUMG00000161134.1 23060 1042 5 ENSG00000198488.9 B3GNT6 chr11 77034398 77041973 + protein_coding KNOWN OTTHUMG00000181633.3 7576 2626 5 ENSG00000149260.13 CAPN5 chr11 77066932 77126155 + protein_coding KNOWN OTTHUMG00000165192.4 59224 6166 70 ENSG00000254550.1 OMP chr11 77102840 77103331 + protein_coding KNOWN OTTHUMG00000165193.1 492 492 1 ENSG00000137474.18 MYO7A chr11 77128264 77215239 + protein_coding KNOWN OTTHUMG00000152822.3 86976 10145 283 ENSG00000178795.8 GDPD4 chr11 77216558 77301687 - protein_coding KNOWN OTTHUMG00000165136.1 85130 3188 46 ENSG00000224829.3 TOMM20P1 chr11 77313606 77314032 + processed_pseudogene KNOWN OTTHUMG00000165137.1 427 427 1 ENSG00000149269.8 PAK1 chr11 77321707 77474635 - protein_coding KNOWN OTTHUMG00000165138.2 152929 6299 136 ENSG00000268635.2 RP11-739B23.1 chr11 77473371 77477030 + antisense NOVEL OTTHUMG00000165139.1 3660 3660 1 ENSG00000074201.7 CLNS1A chr11 77514936 77637805 - protein_coding KNOWN OTTHUMG00000165143.4 122870 4592 54 ENSG00000238880.1 RNU7-59P chr11 77566934 77566994 - snRNA KNOWN NA 61 61 1 ENSG00000143590.12 EFNA3 chr1 155078872 155087538 + protein_coding KNOWN OTTHUMG00000035313.1 8667 1909 12 ENSG00000178301.3 AQP11 chr11 77589391 77610355 + protein_coding KNOWN OTTHUMG00000165194.1 20965 2396 7 ENSG00000048649.12 RSF1 chr11 77659996 77821017 - protein_coding KNOWN OTTHUMG00000150433.2 161022 15740 69 ENSG00000206816.1 Y_RNA chr11 77691650 77691751 + misc_RNA NOVEL NA 102 102 1 ENSG00000254985.1 RSF1-IT2 chr11 77717712 77718411 - sense_intronic NOVEL OTTHUMG00000166669.1 700 566 2 ENSG00000227376.1 FTH1P16 chr11 77734475 77735026 - processed_pseudogene KNOWN OTTHUMG00000150432.1 552 552 1 ENSG00000255409.1 RSF1-IT1 chr11 77738680 77739568 - sense_intronic NOVEL OTTHUMG00000166670.1 889 632 2 ENSG00000219529.2 AP000580.1 chr11 77813319 77813676 - processed_pseudogene KNOWN OTTHUMG00000150434.1 358 358 1 ENSG00000087884.13 AAMDC chr11 77821109 77918432 + protein_coding KNOWN OTTHUMG00000166651.2 97324 1943 55 ENSG00000254459.1 RP11-91P24.7 chr11 77829654 77872262 - antisense NOVEL OTTHUMG00000166654.1 42609 585 2 ENSG00000254691.1 RP11-91P24.5 chr11 77850604 77851511 + antisense NOVEL OTTHUMG00000166652.2 908 551 2 ENSG00000202027.1 Y_RNA chr1 155120490 155120598 + misc_RNA NOVEL NA 109 109 1 ENSG00000255449.1 RP11-91P24.6 chr11 77866412 77870091 - antisense NOVEL OTTHUMG00000166655.1 3680 712 2 ENSG00000241782.1 RP11-91P24.1 chr11 77868722 77869195 - processed_pseudogene KNOWN OTTHUMG00000158426.1 474 474 1 ENSG00000149262.15 INTS4 chr11 77878720 77994678 - protein_coding KNOWN OTTHUMG00000166629.2 115959 6074 95 ENSG00000255115.2 RP11-91P24.3 chr11 77914990 77915275 - processed_pseudogene KNOWN OTTHUMG00000166653.2 286 286 1 ENSG00000151364.14 KCTD14 chr11 78015715 78080219 - protein_coding KNOWN OTTHUMG00000150224.2 64505 2702 12 ENSG00000254829.1 RP11-7I15.3 chr11 78015715 78016495 + antisense NOVEL OTTHUMG00000166630.1 781 686 2 ENSG00000259112.1 NDUFC2-KCTD14 chr11 78016971 78079865 - protein_coding KNOWN OTTHUMG00000171802.1 62895 731 5 ENSG00000254675.1 RP11-7I15.4 chr11 78022933 78023721 + antisense NOVEL OTTHUMG00000166631.1 789 277 2 ENSG00000151365.2 THRSP chr11 78063861 78068351 + protein_coding KNOWN OTTHUMG00000166632.1 4491 1174 2 ENSG00000151366.11 NDUFC2 chr11 78068304 78080219 - protein_coding KNOWN OTTHUMG00000166614.1 11916 2652 13 ENSG00000265521.1 MIR5697 chr1 9967381 9967458 + miRNA KNOWN NA 78 78 1 ENSG00000169242.10 EFNA1 chr1 155127460 155134857 + protein_coding KNOWN OTTHUMG00000035312.2 7398 2539 22 ENSG00000159063.11 ALG8 chr11 78100936 78139660 - protein_coding KNOWN OTTHUMG00000166594.5 38725 3448 149 ENSG00000252494.1 RNU6-126P chr11 78133420 78133522 - snRNA KNOWN NA 103 103 1 ENSG00000246174.6 KCTD21-AS1 chr11 78139771 78175323 + antisense NOVEL OTTHUMG00000166595.1 35553 4095 16 ENSG00000188997.6 KCTD21 chr11 78171249 78188822 - protein_coding KNOWN OTTHUMG00000166497.1 17574 4164 17 ENSG00000118369.11 USP35 chr11 78188812 78214711 + protein_coding KNOWN OTTHUMG00000166492.1 25900 5233 49 ENSG00000033327.11 GAB2 chr11 78215297 78418348 - protein_coding KNOWN OTTHUMG00000166673.1 203052 6771 35 ENSG00000254420.1 RP11-452H21.1 chr11 78324758 78444049 + antisense NOVEL OTTHUMG00000166695.1 119292 437 2 ENSG00000254649.1 RP11-452H21.2 chr11 78388061 78392405 + antisense NOVEL OTTHUMG00000166696.1 4345 365 2 ENSG00000251323.2 RP11-452H21.4 chr11 78423982 78429836 - lincRNA NOVEL OTTHUMG00000166701.1 5855 1642 4 ENSG00000137513.8 NARS2 chr11 78435961 78574874 - protein_coding KNOWN OTTHUMG00000166702.2 138914 3153 54 ENSG00000169241.16 SLC50A1 chr1 155135344 155138857 + protein_coding KNOWN OTTHUMG00000035333.2 3514 2340 64 ENSG00000255084.1 RP11-843A23.1 chr11 78533176 78558565 + antisense NOVEL OTTHUMG00000166697.1 25390 717 4 ENSG00000252033.1 RNU6-311P chr11 78579255 78579356 - snRNA KNOWN NA 102 102 1 ENSG00000254697.1 COPS8P3 chr11 78581675 78582156 + processed_pseudogene KNOWN OTTHUMG00000166759.1 482 482 1 ENSG00000149256.13 TENM4 chr11 78652831 79440948 - protein_coding KNOWN OTTHUMG00000166770.4 788118 16332 105 ENSG00000254563.1 RP11-673F18.1 chr11 78749250 78756480 + antisense NOVEL OTTHUMG00000166783.1 7231 320 2 ENSG00000266550.1 AP002958.1 chr11 78973721 78973809 - miRNA NOVEL NA 89 89 1 ENSG00000255345.1 CTD-2337I7.1 chr11 79092848 79098003 + lincRNA NOVEL OTTHUMG00000166784.1 5156 2399 8 ENSG00000254885.1 RP11-802F5.1 chr11 79191558 79193160 + lincRNA NOVEL OTTHUMG00000166785.1 1603 374 2 ENSG00000211997.1 MIR708 chr11 79402022 79402109 - miRNA KNOWN NA 88 88 1 ENSG00000266570.1 MIR5579 chr11 79422169 79422226 - miRNA KNOWN NA 58 58 1 ENSG00000179085.7 DPM3 chr1 155139891 155140595 - protein_coding KNOWN OTTHUMG00000035335.1 705 622 5 ENSG00000255209.1 RP11-258O13.1 chr11 79604967 79612300 - lincRNA NOVEL OTTHUMG00000166787.1 7334 834 2 ENSG00000221551.1 AP000478.1 chr11 79692379 79692529 + miRNA NOVEL NA 151 151 1 ENSG00000279295.1 RP11-683O4.1 chr11 79966805 79968708 + TEC KNOWN OTTHUMG00000166788.1 1904 1904 1 ENSG00000254471.1 RP11-885L14.1 chr11 79987513 79989630 + processed_pseudogene KNOWN OTTHUMG00000166789.1 2118 2118 1 ENSG00000254434.1 CTD-2555I5.1 chr11 80321620 80327911 - lincRNA NOVEL OTTHUMG00000166791.1 6292 585 2 ENSG00000200146.1 RNU6-544P chr11 80527960 80528066 + snRNA KNOWN NA 107 107 1 ENSG00000255014.1 ARL6IP1P3 chr11 80653429 80653988 - processed_pseudogene KNOWN OTTHUMG00000166792.1 560 560 1 ENSG00000255178.1 RP11-686G23.2 chr11 80751200 80762826 - lincRNA NOVEL OTTHUMG00000166793.1 11627 1571 3 ENSG00000254437.1 RP11-170L9.1 chr11 80957317 80957634 + processed_pseudogene KNOWN OTTHUMG00000166797.1 318 318 1 ENSG00000277854.1 AP003464.1 chr11 81122519 81122586 - miRNA NOVEL NA 68 68 1 ENSG00000223452.3 HMGN2P18 chr1 155148544 155148813 + processed_pseudogene KNOWN OTTHUMG00000013903.1 270 270 1 ENSG00000254747.1 RP11-664H7.1 chr11 81552226 81552516 + processed_pseudogene KNOWN OTTHUMG00000166827.1 291 291 1 ENSG00000255316.1 RP11-664H7.2 chr11 81555910 81556425 - unprocessed_pseudogene KNOWN OTTHUMG00000166828.1 516 516 1 ENSG00000275554.1 AP002802.1 chr11 81806571 81806635 - miRNA NOVEL NA 65 65 1 ENSG00000270701.1 RP11-876F14.2 chr11 81842435 81842669 - processed_pseudogene KNOWN OTTHUMG00000184805.1 235 235 1 ENSG00000245832.5 RP11-179A16.1 chr11 81879851 82718082 - lincRNA NOVEL OTTHUMG00000166867.1 838232 1840 16 ENSG00000264110.1 MIR4300 chr11 81890741 81890836 - miRNA KNOWN NA 96 96 1 ENSG00000254511.1 RP11-876F14.1 chr11 81970994 81987813 + lincRNA NOVEL OTTHUMG00000166868.1 16820 342 2 ENSG00000255246.1 RP11-179A16.2 chr11 82603743 82643419 - lincRNA NOVEL OTTHUMG00000166836.2 39677 740 4 ENSG00000227097.5 RPS28P7 chr11 82689559 82689768 + processed_pseudogene KNOWN OTTHUMG00000158427.1 210 210 1 ENSG00000182103.4 FAM181B chr11 82729941 82733864 - protein_coding KNOWN OTTHUMG00000166869.1 3924 3924 1 ENSG00000163463.10 KRTCAP2 chr1 155169408 155173475 - protein_coding KNOWN OTTHUMG00000013904.1 4068 3826 44 ENSG00000255382.1 RP11-718B12.2 chr11 82791662 82817146 + lincRNA NOVEL OTTHUMG00000166896.1 25485 446 2 ENSG00000255063.1 RP11-718B12.1 chr11 82805354 82806509 + processed_pseudogene KNOWN OTTHUMG00000166897.1 1156 1156 1 ENSG00000137509.9 PRCP chr11 82823502 82970584 - protein_coding KNOWN OTTHUMG00000166899.2 147083 12798 90 ENSG00000254441.1 RP11-718B12.5 chr11 82835509 82837222 + processed_pseudogene KNOWN OTTHUMG00000166928.1 1714 915 4 ENSG00000165490.11 DDIAS chr11 82899975 82958277 + protein_coding KNOWN OTTHUMG00000166929.1 58303 5339 61 ENSG00000242279.1 RP11-659G9.1 chr11 82957423 82958216 + processed_pseudogene KNOWN OTTHUMG00000158432.1 794 794 1 ENSG00000254698.1 RP11-659G9.3 chr11 82963681 83039115 - sense_overlapping NOVEL OTTHUMG00000166972.1 75435 433 2 ENSG00000137502.8 RAB30 chr11 82973133 83071923 - protein_coding KNOWN OTTHUMG00000166973.2 98791 11832 69 ENSG00000254522.1 RP11-113K21.1 chr11 83040806 83041403 - processed_pseudogene KNOWN OTTHUMG00000167009.1 598 286 2 ENSG00000207221.1 SNORA70E chr11 83041464 83041598 - snoRNA KNOWN NA 135 135 1 ENSG00000273088.1 RP11-201K10.3 chr1 155169409 155187272 - protein_coding NOVEL OTTHUMG00000185855.2 17864 753 5 ENSG00000246067.6 RAB30-AS1 chr11 83072066 83106719 + lincRNA NOVEL OTTHUMG00000167010.2 34654 2429 20 ENSG00000255503.1 RP11-113K21.4 chr11 83072402 83097196 - lincRNA NOVEL OTTHUMG00000167011.1 24795 436 3 ENSG00000279900.1 RP11-113K21.6 chr11 83083687 83084138 + TEC KNOWN OTTHUMG00000167012.1 452 452 1 ENSG00000255010.1 RP11-113K21.3 chr11 83106580 83106961 - processed_pseudogene KNOWN OTTHUMG00000167013.1 382 382 1 ENSG00000254965.1 RP11-113K21.2 chr11 83111060 83111442 - processed_pseudogene KNOWN OTTHUMG00000167014.1 383 383 1 ENSG00000255051.1 BCAS2P1 chr11 83132056 83134737 + processed_pseudogene KNOWN OTTHUMG00000167015.1 2682 632 4 ENSG00000165494.9 PCF11 chr11 83156988 83187451 + protein_coding KNOWN OTTHUMG00000167031.2 30464 9951 54 ENSG00000254676.1 RP11-727A23.4 chr11 83180144 83184520 + sense_overlapping NOVEL OTTHUMG00000167032.1 4377 905 2 ENSG00000247137.7 RP11-727A23.5 chr11 83184491 83193794 - processed_transcript NOVEL OTTHUMG00000167033.2 9304 2986 27 ENSG00000269939.1 RP11-727A23.11 chr11 83185521 83187036 - lincRNA NOVEL OTTHUMG00000183952.1 1516 1516 1 ENSG00000163462.16 TRIM46 chr1 155173787 155184971 + protein_coding KNOWN OTTHUMG00000035680.2 11185 4533 105 ENSG00000137494.12 ANKRD42 chr11 83193739 83260694 + protein_coding KNOWN OTTHUMG00000167075.1 66956 6724 70 ENSG00000255541.1 RP11-727A23.8 chr11 83209399 83209634 + processed_pseudogene KNOWN OTTHUMG00000167076.1 236 236 1 ENSG00000254551.1 RP11-727A23.7 chr11 83209431 83213379 - antisense NOVEL OTTHUMG00000167077.1 3949 766 2 ENSG00000241020.1 RP11-727A23.1 chr11 83213005 83213404 + processed_pseudogene KNOWN OTTHUMG00000158433.1 400 400 1 ENSG00000137500.8 CCDC90B chr11 83259097 83286407 - protein_coding KNOWN OTTHUMG00000167078.2 27311 6561 133 ENSG00000255234.4 RP11-727A23.10 chr11 83286128 83423516 + antisense NOVEL OTTHUMG00000167091.1 137389 2845 8 ENSG00000255003.1 CYCSP28 chr11 83328926 83329246 + processed_pseudogene KNOWN OTTHUMG00000167092.1 321 321 1 ENSG00000274004.1 H19_3 chr11 83386988 83387102 + misc_RNA NOVEL NA 115 115 1 ENSG00000150672.15 DLG2 chr11 83455012 85627922 - protein_coding KNOWN OTTHUMG00000134309.6 2172911 16089 310 ENSG00000255311.4 RP11-160H12.2 chr11 83643602 83725390 + antisense NOVEL OTTHUMG00000167144.1 81789 2112 19 ENSG00000185499.15 MUC1 chr1 155185824 155192916 - protein_coding KNOWN OTTHUMG00000035681.4 7093 4717 191 ENSG00000254629.1 RP11-160H12.3 chr11 83789977 83791578 - processed_pseudogene KNOWN OTTHUMG00000167147.1 1602 1602 1 ENSG00000250257.1 LDHAL6DP chr11 83814571 83815263 - unprocessed_pseudogene KNOWN OTTHUMG00000160113.1 693 693 1 ENSG00000264838.1 AP003305.1 chr11 84229560 84229649 + miRNA NOVEL NA 90 90 1 ENSG00000254713.2 HNRNPA1P72 chr11 84545131 84546846 - processed_pseudogene KNOWN OTTHUMG00000167148.3 1716 967 2 ENSG00000240174.1 RP11-851M3.1 chr11 84639993 84640565 + processed_pseudogene KNOWN OTTHUMG00000158434.1 573 573 1 ENSG00000254787.1 CTD-2537O9.1 chr11 84720826 84800701 + antisense NOVEL OTTHUMG00000167145.1 79876 351 4 ENSG00000274006.1 DLG2-AS1_1 chr11 84887207 84887419 + misc_RNA NOVEL NA 213 213 1 ENSG00000276179.1 DLG2-AS1_2 chr11 84890744 84890961 + misc_RNA NOVEL NA 218 218 1 ENSG00000255555.1 AP000857.3 chr11 84936689 84955705 + antisense NOVEL OTTHUMG00000167150.1 19017 419 2 ENSG00000255396.2 AP000857.2 chr11 84997226 84997768 - processed_pseudogene KNOWN OTTHUMG00000167151.2 543 543 1 ENSG00000279986.1 AC234582.2 chr1 155188587 155189452 + protein_coding KNOWN NA 866 303 2 ENSG00000213305.3 HNRNPCP6 chr11 85020785 85021655 - processed_pseudogene KNOWN OTTHUMG00000167152.1 871 871 1 ENSG00000254684.1 RP11-882I15.1 chr11 85336075 85336572 - processed_pseudogene KNOWN OTTHUMG00000167153.1 498 498 1 ENSG00000254897.1 RP11-482L11.1 chr11 85452282 85453698 - processed_pseudogene KNOWN OTTHUMG00000167154.1 1417 1417 1 ENSG00000206583.1 RNU6-1292P chr11 85509938 85510044 + snRNA KNOWN NA 107 107 1 ENSG00000171204.11 TMEM126B chr11 85628573 85636539 + protein_coding KNOWN OTTHUMG00000166974.1 7967 2416 54 ENSG00000171202.5 TMEM126A chr11 85647967 85656547 + protein_coding KNOWN OTTHUMG00000166975.1 8581 971 26 ENSG00000137504.12 CREBZF chr11 85659708 85682908 - protein_coding KNOWN OTTHUMG00000133648.5 23201 5587 30 ENSG00000179071.4 CCDC89 chr11 85684866 85686277 - protein_coding KNOWN OTTHUMG00000166976.1 1412 1412 1 ENSG00000137501.15 SYTL2 chr11 85694224 85811159 - protein_coding KNOWN OTTHUMG00000166977.2 116936 11266 277 ENSG00000279742.1 RP11-700A24.1 chr11 85852557 85854943 - TEC KNOWN OTTHUMG00000187437.1 2387 2387 1 ENSG00000279487.1 AC234582.1 chr1 155190050 155191339 + protein_coding KNOWN NA 1290 303 2 ENSG00000150676.11 CCDC83 chr11 85855101 85920021 + protein_coding KNOWN OTTHUMG00000166978.2 64921 2359 36 ENSG00000255005.1 RP11-90K17.2 chr11 85916502 85923682 - antisense NOVEL OTTHUMG00000166979.1 7181 448 4 ENSG00000254479.1 SLC25A1P1 chr11 85934737 85935663 + processed_pseudogene KNOWN OTTHUMG00000166980.2 927 927 1 ENSG00000073921.16 PICALM chr11 85957684 86069882 - protein_coding KNOWN OTTHUMG00000166981.3 112199 5833 229 ENSG00000200877.1 RNU6-560P chr11 86153227 86153334 + snRNA KNOWN NA 108 108 1 ENSG00000254699.1 RP11-12D16.2 chr11 86192787 86193482 - lincRNA NOVEL OTTHUMG00000167207.1 696 178 2 ENSG00000254502.1 FNTAL1 chr11 86195132 86196266 + processed_pseudogene KNOWN OTTHUMG00000167208.1 1135 1135 1 ENSG00000276669.1 Metazoa_SRP chr11 86216596 86216878 + misc_RNA NOVEL NA 283 283 1 ENSG00000074266.16 EED chr11 86244544 86278813 + protein_coding KNOWN OTTHUMG00000167209.6 34270 7016 77 ENSG00000273630.1 MIR6755 chr11 86278333 86278398 + miRNA KNOWN NA 66 66 1 ENSG00000241326.1 RP11-807G9.2 chr1 9983141 9984568 + sense_intronic NOVEL OTTHUMG00000001801.1 1428 436 2 ENSG00000271748.2 MIR92B chr1 155195167 155195275 + miRNA KNOWN NA 109 109 1 ENSG00000254783.1 RP11-320L11.2 chr11 86283927 86284668 + processed_pseudogene KNOWN OTTHUMG00000167210.1 742 742 1 ENSG00000255222.1 SETP17 chr11 86294760 86295576 + processed_pseudogene KNOWN OTTHUMG00000167211.1 817 817 1 ENSG00000149196.14 C11orf73 chr11 86302211 86345931 + protein_coding KNOWN OTTHUMG00000167212.2 43721 3421 35 ENSG00000239856.3 RN7SL225P chr11 86324012 86324309 - misc_RNA KNOWN NA 298 298 1 ENSG00000149201.8 CCDC81 chr11 86374736 86423109 + protein_coding KNOWN OTTHUMG00000167213.1 48374 4544 64 ENSG00000254733.1 RP11-317J19.1 chr11 86431590 86622867 + antisense NOVEL OTTHUMG00000167214.1 191278 411 3 ENSG00000254727.1 PTP4A1P6 chr11 86432098 86432575 + transcribed_processed_pseudogene KNOWN OTTHUMG00000167215.1 478 478 1 ENSG00000278989.1 RP11-762L8.6 chr11 86434924 86437282 - TEC KNOWN OTTHUMG00000167216.1 2359 2359 1 ENSG00000151376.15 ME3 chr11 86441108 86672636 - protein_coding KNOWN OTTHUMG00000167217.2 231529 3838 92 ENSG00000254731.1 CTD-2005H7.1 chr11 86703099 86714092 + lincRNA NOVEL OTTHUMG00000167224.1 10994 432 2 ENSG00000169231.12 THBS3 chr1 155195588 155209051 - protein_coding KNOWN OTTHUMG00000035710.4 13464 4623 137 ENSG00000255250.1 CTD-2005H7.2 chr11 86727355 86765265 + lincRNA NOVEL OTTHUMG00000167225.1 37911 503 5 ENSG00000150687.10 PRSS23 chr11 86791059 86952910 + protein_coding KNOWN OTTHUMG00000167226.2 161852 11725 26 ENSG00000271318.1 AP000654.5 chr11 86821143 86821728 - processed_pseudogene KNOWN OTTHUMG00000184803.1 586 586 1 ENSG00000197882.3 OR7E13P chr11 86832540 86833449 - unprocessed_pseudogene KNOWN OTTHUMG00000167227.1 910 910 1 ENSG00000269895.1 AP000654.4 chr11 86833068 86837615 + lincRNA NOVEL OTTHUMG00000184076.1 4548 1192 2 ENSG00000255203.1 OR7E2P chr11 86857059 86857947 - unprocessed_pseudogene KNOWN OTTHUMG00000167228.1 889 889 1 ENSG00000255471.1 RP11-736K20.5 chr11 86892214 86925037 - antisense NOVEL OTTHUMG00000167229.1 32824 1218 5 ENSG00000280339.1 RP11-736K20.4 chr11 86908990 86912238 - TEC KNOWN OTTHUMG00000167230.1 3249 3249 1 ENSG00000174804.3 FZD4 chr11 86945679 86955391 - protein_coding KNOWN OTTHUMG00000167231.2 9713 7383 2 ENSG00000246523.6 RP11-736K20.6 chr11 86955619 87000959 + lincRNA NOVEL OTTHUMG00000167232.2 45341 1393 6 ENSG00000231064.4 RP11-263K19.4 chr1 155196868 155205495 + antisense NOVEL OTTHUMG00000035709.1 8628 2084 21 ENSG00000254748.1 HNRNPCP8 chr11 87024583 87025777 + unprocessed_pseudogene KNOWN OTTHUMG00000167234.1 1195 888 2 ENSG00000166575.15 TMEM135 chr11 87037844 87323758 + protein_coding KNOWN OTTHUMG00000167248.2 285915 5030 63 ENSG00000277121.1 AP002967.1 chr11 87089014 87089120 + miRNA NOVEL NA 107 107 1 ENSG00000254843.1 RP11-648O15.1 chr11 87094734 87096585 - processed_pseudogene KNOWN OTTHUMG00000167235.1 1852 1852 1 ENSG00000279836.1 RP11-648O15.2 chr11 87121058 87121596 + TEC KNOWN OTTHUMG00000167249.1 539 539 1 ENSG00000213287.3 RP11-680L20.1 chr11 87258851 87259259 - processed_pseudogene KNOWN OTTHUMG00000167236.1 409 409 1 ENSG00000270510.1 RP11-777F6.3 chr11 87323709 87324359 - processed_pseudogene KNOWN OTTHUMG00000184802.1 651 651 1 ENSG00000254582.1 PSMA2P1 chr11 87329407 87330052 - processed_pseudogene KNOWN OTTHUMG00000167250.1 646 646 1 ENSG00000255391.1 CTD-2028E8.1 chr11 87480736 87481297 - processed_pseudogene KNOWN OTTHUMG00000167251.1 562 562 1 ENSG00000279701.1 CTD-2028E8.2 chr11 87490144 87491110 + TEC KNOWN OTTHUMG00000167252.1 967 967 1 ENSG00000173171.13 MTX1 chr1 155208699 155213824 + protein_coding KNOWN OTTHUMG00000035708.3 5126 3278 48 ENSG00000278929.1 RP11-137O10.1 chr11 87565994 87566421 + TEC KNOWN OTTHUMG00000167253.1 428 428 1 ENSG00000223015.1 RNU6-1135P chr11 87606783 87606885 + snRNA KNOWN NA 103 103 1 ENSG00000255183.1 RP11-720D4.3 chr11 87718354 87719411 - lincRNA NOVEL OTTHUMG00000167254.1 1058 679 2 ENSG00000279341.1 RP11-720D4.2 chr11 87718667 87721233 - TEC KNOWN OTTHUMG00000167255.1 2567 2567 1 ENSG00000254650.1 RP11-665E10.5 chr11 87815035 87816157 - processed_pseudogene KNOWN OTTHUMG00000167257.1 1123 1123 1 ENSG00000255022.1 RP11-665E10.1 chr11 87816224 87816524 + processed_pseudogene KNOWN OTTHUMG00000167258.1 301 301 1 ENSG00000279793.1 RP11-665E10.2 chr11 87816999 87817567 + TEC KNOWN OTTHUMG00000167259.1 569 569 1 ENSG00000280307.1 RP11-665E10.4 chr11 87879473 87880095 - TEC KNOWN OTTHUMG00000167260.1 623 623 1 ENSG00000254794.1 RP11-665E10.3 chr11 87917948 87917999 - processed_pseudogene KNOWN OTTHUMG00000167261.1 52 52 1 ENSG00000255516.1 RP11-164N3.1 chr11 88050106 88062110 + lincRNA NOVEL OTTHUMG00000167285.1 12005 572 3 ENSG00000236263.1 RP11-263K19.6 chr1 155211151 155213819 - antisense NOVEL OTTHUMG00000035711.1 2669 568 2 ENSG00000255102.1 RP11-164N3.2 chr11 88061774 88098147 - lincRNA NOVEL OTTHUMG00000167286.1 36374 488 2 ENSG00000255241.1 RP11-164N3.3 chr11 88098591 88115835 + antisense NOVEL OTTHUMG00000167287.1 17245 252 3 ENSG00000206690.1 Y_RNA chr11 88099995 88100105 + misc_RNA NOVEL NA 111 111 1 ENSG00000123892.10 RAB38 chr11 88113242 88175467 - protein_coding KNOWN OTTHUMG00000167288.3 62226 1465 8 ENSG00000277712.1 5S_rRNA chr11 88131569 88131657 + rRNA NOVEL NA 89 89 1 ENSG00000279733.1 RP11-685B24.1 chr11 88165575 88167691 - TEC KNOWN OTTHUMG00000167289.1 2117 2117 1 ENSG00000266581.1 MIR3166 chr11 88176502 88176593 + miRNA KNOWN NA 92 92 1 ENSG00000109861.14 CTSC chr11 88293592 88337787 - protein_coding KNOWN OTTHUMG00000167290.2 44196 11421 36 ENSG00000249489.1 GAPDHP70 chr11 88408179 88409223 - processed_pseudogene KNOWN OTTHUMG00000159997.1 1045 1045 1 ENSG00000168959.13 GRM5 chr11 88504576 89065945 - protein_coding KNOWN OTTHUMG00000134306.3 561370 8657 34 ENSG00000160766.13 GBAP1 chr1 155213821 155227422 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000176393.4 13602 3656 70 ENSG00000255082.1 GRM5-AS1 chr11 88504576 88524054 + antisense NOVEL OTTHUMG00000167293.1 19479 4837 8 ENSG00000207113.1 RNU6-16P chr11 88612805 88612911 - snRNA KNOWN NA 107 107 1 ENSG00000221130.1 AP001482.1 chr11 89112710 89112824 + miRNA NOVEL NA 115 115 1 ENSG00000077498.8 TYR chr11 89177452 89295759 + protein_coding KNOWN OTTHUMG00000167294.2 118308 3016 11 ENSG00000197692.5 CBX3P7 chr11 89293745 89294246 - processed_pseudogene KNOWN OTTHUMG00000167295.1 502 502 1 ENSG00000279297.1 RP11-796A5.3 chr11 89297717 89298199 + TEC KNOWN OTTHUMG00000167296.1 483 483 1 ENSG00000279603.1 RP11-796A5.4 chr11 89300709 89301477 - TEC KNOWN OTTHUMG00000167297.1 769 769 1 ENSG00000086991.11 NOX4 chr11 89324356 89498187 - protein_coding KNOWN OTTHUMG00000167298.1 173832 6096 192 ENSG00000255295.1 RP11-745I13.1 chr11 89498748 89499198 - processed_pseudogene KNOWN OTTHUMG00000167299.1 451 451 1 ENSG00000279248.1 RP11-643G5.1 chr11 89533645 89534043 - TEC KNOWN OTTHUMG00000167616.1 399 399 1 ENSG00000236675.1 MTX1P1 chr1 155230975 155234325 + unprocessed_pseudogene KNOWN OTTHUMG00000035843.1 3351 838 7 ENSG00000279697.1 RP11-643G5.2 chr11 89545128 89545744 + TEC KNOWN OTTHUMG00000167617.1 617 617 1 ENSG00000255429.1 RP11-643G5.6 chr11 89546637 89589611 - lincRNA NOVEL OTTHUMG00000167618.1 42975 231 2 ENSG00000279045.1 RP11-643G5.7 chr11 89548130 89548795 - TEC KNOWN OTTHUMG00000167619.1 666 666 1 ENSG00000279056.1 RP11-643G5.4 chr11 89556860 89557205 + TEC KNOWN OTTHUMG00000167620.1 346 346 1 ENSG00000280201.1 RP11-643G5.5 chr11 89576913 89577652 + TEC KNOWN OTTHUMG00000167621.1 740 740 1 ENSG00000134612.10 FOLH1B chr11 89639227 89698718 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000167376.3 59492 2505 32 ENSG00000255385.1 UBTFL10 chr11 89700764 89701325 + processed_pseudogene KNOWN OTTHUMG00000167622.1 562 562 1 ENSG00000279163.1 RP11-313I2.3 chr11 89704164 89704658 + TEC KNOWN OTTHUMG00000167623.1 495 495 1 ENSG00000214414.8 TRIM77 chr11 89710299 89717872 + protein_coding KNOWN OTTHUMG00000167624.3 7574 1353 16 ENSG00000255486.1 RP11-313I2.13 chr11 89723482 89727253 - unprocessed_pseudogene KNOWN OTTHUMG00000167625.1 3772 758 2 ENSG00000177628.14 GBA chr1 155234452 155244699 - protein_coding KNOWN OTTHUMG00000035841.2 10248 3648 91 ENSG00000255540.1 RP11-313I2.5 chr11 89731017 89734782 + processed_pseudogene KNOWN OTTHUMG00000167626.1 3766 3766 1 ENSG00000234376.4 UBTFL2 chr11 89752785 89753975 - processed_pseudogene KNOWN OTTHUMG00000167627.1 1191 1191 1 ENSG00000254971.1 RP11-313I2.11 chr11 89753982 89754953 - lincRNA NOVEL OTTHUMG00000167628.1 972 486 2 ENSG00000255170.2 RP11-313I2.6 chr11 89764884 89765138 + processed_pseudogene KNOWN OTTHUMG00000167629.2 255 255 1 ENSG00000204456.4 RP11-313I2.10 chr11 89766440 89768836 - unprocessed_pseudogene KNOWN OTTHUMG00000167630.1 2397 755 3 ENSG00000254751.2 TRIM64DP chr11 89776981 89782377 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000167631.1 5397 1342 5 ENSG00000255162.1 RP11-358N4.3 chr11 89785945 89787838 + unprocessed_pseudogene KNOWN OTTHUMG00000167632.1 1894 1454 2 ENSG00000255285.1 RP11-358N4.5 chr11 89789412 89789733 - processed_pseudogene KNOWN OTTHUMG00000167633.1 322 322 1 ENSG00000168930.12 TRIM49 chr11 89797655 89808575 - protein_coding KNOWN OTTHUMG00000167634.2 10921 2163 14 ENSG00000250946.2 RP11-358N4.6 chr11 89820082 89826922 + unprocessed_pseudogene KNOWN OTTHUMG00000167635.1 6841 1238 6 ENSG00000216109.1 AL713999.1 chr1 155236749 155236837 - miRNA NOVEL NA 89 89 1 ENSG00000166013.11 TRIM53BP chr11 89841997 89850970 + unprocessed_pseudogene KNOWN OTTHUMG00000160564.2 8974 1720 5 ENSG00000204455.7 TRIM51BP chr11 89854953 89862893 + unprocessed_pseudogene KNOWN OTTHUMG00000167636.2 7941 1359 6 ENSG00000254558.1 RP11-81M19.3 chr11 89863848 89865550 - unprocessed_pseudogene KNOWN OTTHUMG00000167637.1 1703 1178 2 ENSG00000189253.7 TRIM64B chr11 89869282 89876017 - protein_coding KNOWN OTTHUMG00000167638.1 6736 2689 6 ENSG00000255235.1 RP11-313I2.8 chr11 89883927 89886213 - unprocessed_pseudogene KNOWN OTTHUMG00000167639.1 2287 284 2 ENSG00000254617.1 AP000648.3 chr11 89887366 89889991 + unprocessed_pseudogene KNOWN OTTHUMG00000167640.1 2626 590 4 ENSG00000254785.1 RP11-81M19.1 chr11 89895799 89900449 - unprocessed_pseudogene KNOWN OTTHUMG00000167641.1 4651 3198 2 ENSG00000255055.1 MTND1P35 chr11 89908540 89909047 + processed_pseudogene KNOWN OTTHUMG00000167642.1 508 508 1 ENSG00000223417.7 TRIM49D1 chr11 89911111 89921767 - protein_coding KNOWN OTTHUMG00000167643.2 10657 2164 21 ENSG00000233802.7 TRIM49D2 chr11 89924064 89933063 + protein_coding NOVEL OTTHUMG00000167644.3 9000 1651 13 ENSG00000160767.19 FAM189B chr1 155247205 155255483 - protein_coding KNOWN OTTHUMG00000035844.2 8279 4468 71 ENSG00000254818.1 RP11-529A4.4 chr11 89944035 89949402 + unprocessed_pseudogene KNOWN OTTHUMG00000167645.1 5368 3915 2 ENSG00000278837.1 RP11-529A4.16 chr11 89954593 89954908 - processed_pseudogene KNOWN OTTHUMG00000187776.1 316 316 1 ENSG00000255360.1 RP11-529A4.15 chr11 89955146 89957165 - unprocessed_pseudogene KNOWN OTTHUMG00000167646.1 2020 323 3 ENSG00000254655.1 RP11-529A4.5 chr11 89960422 89960624 + processed_pseudogene KNOWN OTTHUMG00000167647.1 203 203 1 ENSG00000204450.7 TRIM64 chr11 89968502 89975228 + protein_coding KNOWN OTTHUMG00000167648.2 6727 2691 6 ENSG00000255305.1 RP11-529A4.7 chr11 89978540 89980661 + unprocessed_pseudogene KNOWN OTTHUMG00000167649.1 2122 1677 2 ENSG00000237706.4 TRIM51EP chr11 89981441 89989559 - unprocessed_pseudogene KNOWN OTTHUMG00000167650.1 8119 1516 6 ENSG00000225581.3 TRIM53AP chr11 89993536 89999741 - unprocessed_pseudogene KNOWN OTTHUMG00000167651.1 6206 1544 6 ENSG00000255184.1 RP11-313I2.7 chr11 90017611 90024511 - unprocessed_pseudogene KNOWN OTTHUMG00000167652.1 6901 1202 5 ENSG00000204449.3 TRIM49C chr11 90031106 90042025 + protein_coding KNOWN OTTHUMG00000167653.1 10920 2163 8 ENSG00000162444.11 RBP7 chr1 9997206 10016020 + protein_coding KNOWN OTTHUMG00000001798.2 18815 861 9 ENSG00000116521.9 SCAMP3 chr1 155255979 155262430 - protein_coding KNOWN OTTHUMG00000035874.2 6452 2442 51 ENSG00000254803.1 RP11-529A4.9 chr11 90049945 90050266 + processed_pseudogene KNOWN OTTHUMG00000167654.1 322 322 1 ENSG00000254916.1 RP11-529A4.12 chr11 90051837 90053736 - unprocessed_pseudogene KNOWN OTTHUMG00000167655.1 1900 1459 2 ENSG00000223709.5 TRIM64EP chr11 90057605 90062999 - unprocessed_pseudogene KNOWN OTTHUMG00000167656.2 5395 1307 5 ENSG00000255011.1 RP11-529A4.10 chr11 90071136 90073055 + unprocessed_pseudogene KNOWN OTTHUMG00000167657.1 1920 217 3 ENSG00000254888.2 RP11-716D19.1 chr11 90074839 90075096 - processed_pseudogene KNOWN OTTHUMG00000167658.2 258 258 1 ENSG00000255009.4 UBTFL1 chr11 90085950 90087131 + protein_coding KNOWN OTTHUMG00000155291.4 1182 1182 1 ENSG00000254436.1 AP000648.6 chr11 90098421 90098817 - processed_pseudogene KNOWN OTTHUMG00000167659.1 397 397 1 ENSG00000207299.1 SNORD56 chr11 90118391 90118461 + snoRNA NOVEL NA 71 71 1 ENSG00000279299.1 AP000648.4 chr11 90125658 90126061 + TEC KNOWN OTTHUMG00000167660.1 404 404 1 ENSG00000077616.9 NAALAD2 chr11 90131515 90192894 + protein_coding KNOWN OTTHUMG00000166368.4 61380 7254 91 ENSG00000176444.17 CLK2 chr1 155262868 155278491 - protein_coding KNOWN OTTHUMG00000035873.2 15624 3670 66 ENSG00000280385.1 AP000648.5 chr11 90193614 90198120 + TEC KNOWN OTTHUMG00000167661.2 4507 4507 1 ENSG00000110172.10 CHORDC1 chr11 90201160 90223364 - protein_coding KNOWN OTTHUMG00000167305.2 22205 10655 74 ENSG00000280367.1 RP11-121L10.2 chr11 90223153 90226538 + TEC KNOWN OTTHUMG00000167306.1 3386 3386 1 ENSG00000261645.4 DISC1FP1 chr11 90251232 90915052 + processed_transcript NOVEL OTTHUMG00000167309.3 663821 2926 27 ENSG00000214391.3 TUBAP2 chr11 90282560 90284172 + processed_pseudogene KNOWN OTTHUMG00000167307.1 1613 1613 1 ENSG00000223101.1 AP002364.1 chr11 90324776 90324884 + miRNA NOVEL NA 109 109 1 ENSG00000266703.1 MIR4490 chr11 90555774 90555857 - miRNA KNOWN NA 84 84 1 ENSG00000280430.1 RP11-660M18.1 chr11 90731110 90731723 + TEC KNOWN OTTHUMG00000167308.1 614 614 1 ENSG00000221586.1 MIR1261 chr11 90869121 90869202 - miRNA KNOWN NA 82 82 1 ENSG00000280085.1 RP11-678K21.1 chr11 90972316 90972521 - TEC KNOWN OTTHUMG00000167310.1 206 206 1 ENSG00000143630.8 HCN3 chr1 155277583 155289848 + protein_coding KNOWN OTTHUMG00000035872.2 12266 4121 23 ENSG00000279209.1 RP11-678K21.2 chr11 91013787 91015299 + TEC KNOWN OTTHUMG00000167311.1 1513 1513 1 ENSG00000279438.1 RP11-678K21.3 chr11 91093875 91094260 - TEC KNOWN OTTHUMG00000167312.1 386 386 1 ENSG00000254677.1 OSBPL9P2 chr11 91114724 91115951 - processed_pseudogene KNOWN OTTHUMG00000167313.1 1228 1228 1 ENSG00000255070.1 OSBPL9P3 chr11 91115961 91116555 + processed_pseudogene KNOWN OTTHUMG00000167314.1 595 595 1 ENSG00000255187.1 RP11-699F16.2 chr11 91158083 91167294 + lincRNA NOVEL OTTHUMG00000167315.1 9212 504 3 ENSG00000280124.1 RP11-739P6.1 chr11 91184934 91185543 - TEC KNOWN OTTHUMG00000167316.1 610 610 1 ENSG00000278980.1 RP11-739P6.2 chr11 91208838 91209590 - TEC KNOWN OTTHUMG00000167317.1 753 753 1 ENSG00000280093.1 RP11-843F11.1 chr11 91382909 91383289 + TEC KNOWN OTTHUMG00000167329.1 381 381 1 ENSG00000255332.6 RP11-201M22.1 chr11 91794362 91812294 + lincRNA NOVEL OTTHUMG00000167330.3 17933 1542 9 ENSG00000254961.1 TUBB4BP4 chr11 91949731 91950034 - processed_pseudogene KNOWN OTTHUMG00000167333.1 304 304 1 ENSG00000143627.16 PKLR chr1 155289839 155301434 - protein_coding KNOWN OTTHUMG00000035875.2 11596 2618 27 ENSG00000278859.1 RP11-806N19.2 chr11 91992833 91993255 + TEC KNOWN OTTHUMG00000167334.1 423 423 1 ENSG00000242248.2 RPL7AP57 chr11 92161106 92161889 + processed_pseudogene KNOWN OTTHUMG00000158435.2 784 784 1 ENSG00000235547.3 NDUFB11P1 chr11 92336032 92336496 - processed_pseudogene KNOWN OTTHUMG00000154744.3 465 465 1 ENSG00000165323.14 FAT3 chr11 92352096 92896470 + protein_coding KNOWN OTTHUMG00000154468.4 544375 19280 69 ENSG00000249255.1 PGAM1P9 chr11 92366496 92367250 - processed_pseudogene KNOWN OTTHUMG00000160131.1 755 755 1 ENSG00000254705.1 RP11-675M1.2 chr11 92400191 92408176 - antisense NOVEL OTTHUMG00000167359.1 7986 775 5 ENSG00000244244.2 RPS3AP42 chr11 92498152 92498935 - processed_pseudogene KNOWN OTTHUMG00000158439.2 784 784 1 ENSG00000255506.1 RP11-203F8.1 chr11 92748732 92766867 - antisense NOVEL OTTHUMG00000167360.1 18136 583 2 ENSG00000255127.1 RP11-676F20.2 chr11 92914602 92916591 + unprocessed_pseudogene KNOWN OTTHUMG00000167361.1 1990 963 5 ENSG00000255287.1 SNRPGP16 chr11 92937441 92937666 + processed_pseudogene KNOWN OTTHUMG00000167362.1 226 226 1 ENSG00000160752.13 FDPS chr1 155308748 155320666 + protein_coding KNOWN OTTHUMG00000013909.2 11919 3718 138 ENSG00000254874.1 RP11-676F20.1 chr11 92965797 92966603 + lincRNA NOVEL OTTHUMG00000167363.1 807 266 2 ENSG00000134640.2 MTNR1B chr11 92969720 92985066 + protein_coding KNOWN OTTHUMG00000167364.1 15347 1956 7 ENSG00000242807.1 RPL26P31 chr11 93052395 93052827 - processed_pseudogene KNOWN OTTHUMG00000158440.1 433 433 1 ENSG00000278892.1 RP11-183A22.3 chr11 93071529 93072031 + TEC KNOWN OTTHUMG00000167365.1 503 503 1 ENSG00000279304.1 RP11-573M3.6 chr11 93133855 93134164 + TEC KNOWN OTTHUMG00000167366.1 310 310 1 ENSG00000180773.13 SLC36A4 chr11 93144171 93197964 - protein_coding KNOWN OTTHUMG00000167368.3 53794 9685 43 ENSG00000255445.1 RP11-573M3.3 chr11 93152075 93152750 + processed_pseudogene KNOWN OTTHUMG00000167369.1 676 676 1 ENSG00000280379.1 RP11-573M3.2 chr11 93171134 93171906 + TEC KNOWN OTTHUMG00000167370.1 773 773 1 ENSG00000279269.1 RP11-573M3.5 chr11 93206990 93207583 - TEC KNOWN OTTHUMG00000167371.1 594 594 1 ENSG00000233737.3 RP11-573M3.4 chr11 93221486 93221630 - processed_pseudogene KNOWN OTTHUMG00000167372.1 145 145 1 ENSG00000225855.5 RUSC1-AS1 chr1 155316863 155324176 - antisense KNOWN OTTHUMG00000013912.2 7314 3516 14 ENSG00000255233.1 RP11-755E23.3 chr11 93240133 93241168 + lincRNA NOVEL OTTHUMG00000167521.1 1036 400 2 ENSG00000279684.1 RP11-755E23.2 chr11 93286629 93288903 - TEC KNOWN OTTHUMG00000167522.1 2275 2275 1 ENSG00000165325.12 CCDC67 chr11 93329971 93438487 + protein_coding KNOWN OTTHUMG00000167441.4 108517 4227 107 ENSG00000221565.1 AP004242.1 chr11 93407825 93407913 - miRNA NOVEL NA 89 89 1 ENSG00000166002.5 SMCO4 chr11 93478472 93543508 - protein_coding KNOWN OTTHUMG00000167442.1 65037 1223 15 ENSG00000234106.3 RP11-288E14.2 chr11 93535468 93535816 + processed_pseudogene KNOWN OTTHUMG00000167443.1 349 349 1 ENSG00000240202.3 RN7SL223P chr11 93556913 93557206 + misc_RNA KNOWN NA 294 294 1 ENSG00000279454.1 RP11-178H8.1 chr11 93587703 93588559 + TEC KNOWN OTTHUMG00000167445.1 857 857 1 ENSG00000278953.1 RP11-178H8.2 chr11 93592187 93592669 + TEC KNOWN OTTHUMG00000167447.1 483 483 1 ENSG00000255515.1 RP11-178H8.3 chr11 93609760 93610333 - processed_pseudogene KNOWN OTTHUMG00000167448.1 574 574 1 ENSG00000160753.14 RUSC1 chr1 155320896 155331114 + protein_coding KNOWN OTTHUMG00000013910.4 10219 5427 115 ENSG00000166004.13 CEP295 chr11 93661639 93730358 + protein_coding KNOWN OTTHUMG00000167449.3 68720 9495 71 ENSG00000199875.1 Y_RNA chr11 93719603 93719715 + misc_RNA NOVEL NA 113 113 1 ENSG00000254911.3 SCARNA9 chr11 93721513 93721865 + antisense KNOWN OTTHUMG00000167450.2 353 353 1 ENSG00000275146.1 snoU2_19 chr11 93721542 93721621 + snoRNA NOVEL NA 80 80 1 ENSG00000273885.1 snoU2-30 chr11 93721797 93721866 + snoRNA NOVEL NA 70 70 1 ENSG00000279696.1 RP11-178H8.7 chr11 93726654 93729805 - TEC KNOWN OTTHUMG00000167487.1 3152 3152 1 ENSG00000166012.13 TAF1D chr11 93729948 93784391 - protein_coding KNOWN OTTHUMG00000167451.3 54444 8420 129 ENSG00000207112.1 SNORA25 chr11 93730513 93730646 - snoRNA KNOWN NA 134 134 1 ENSG00000206799.1 SNORA32 chr11 93730979 93731099 - snoRNA KNOWN NA 121 121 1 ENSG00000202314.1 SNORD6 chr11 93731502 93731574 - snoRNA KNOWN NA 73 73 1 ENSG00000116539.9 ASH1L chr1 155335268 155562807 - protein_coding KNOWN OTTHUMG00000014011.3 227540 13296 76 ENSG00000206834.1 SNORA1 chr11 93732004 93732133 - snoRNA KNOWN NA 130 130 1 ENSG00000207304.1 SNORA8 chr11 93732361 93732499 - snoRNA KNOWN NA 139 139 1 ENSG00000281293.1 AP001273.1 chr11 93732435 93732501 - miRNA NOVEL NA 67 67 1 ENSG00000239195.1 SNORD5 chr11 93733228 93733300 - snoRNA KNOWN NA 73 73 1 ENSG00000207145.1 SNORA18 chr11 93733466 93733597 - snoRNA KNOWN NA 132 132 1 ENSG00000221170.1 MIR1304 chr11 93733674 93733764 - miRNA KNOWN NA 91 91 1 ENSG00000210825.1 SNORA40 chr11 93735111 93735236 - snoRNA KNOWN NA 126 126 1 ENSG00000182919.13 C11orf54 chr11 93741591 93764749 + protein_coding KNOWN OTTHUMG00000167452.3 23159 6269 100 ENSG00000042429.9 MED17 chr11 93784227 93814695 + protein_coding KNOWN OTTHUMG00000167497.2 30469 10773 59 ENSG00000214376.5 VSTM5 chr11 93818232 93850531 - protein_coding KNOWN OTTHUMG00000154159.2 32300 3849 9 ENSG00000207720.1 MIR555 chr1 155346350 155346445 - miRNA KNOWN NA 96 96 1 ENSG00000206911.1 Y_RNA chr11 93827622 93827734 + misc_RNA NOVEL NA 113 113 1 ENSG00000255995.1 HPRTP4 chr11 93991346 93991429 - processed_pseudogene KNOWN OTTHUMG00000167750.1 84 84 1 ENSG00000256752.1 HPRTP3 chr11 93998643 93999218 - processed_pseudogene KNOWN OTTHUMG00000167744.2 576 576 1 ENSG00000181333.11 HEPHL1 chr11 94021361 94113751 + protein_coding KNOWN OTTHUMG00000167751.2 92391 5345 20 ENSG00000227593.2 RP11-715G18.3 chr11 94055023 94055972 - processed_pseudogene KNOWN OTTHUMG00000167752.1 950 950 1 ENSG00000110218.7 PANX1 chr11 94128928 94181972 + protein_coding KNOWN OTTHUMG00000167757.1 53045 2769 10 ENSG00000256745.1 RP11-680H20.1 chr11 94188449 94188997 - processed_pseudogene KNOWN OTTHUMG00000167753.1 549 549 1 ENSG00000250519.5 RP11-680H20.2 chr11 94238150 94279206 + lincRNA NOVEL OTTHUMG00000167754.2 41057 723 5 ENSG00000183560.7 IZUMO1R chr11 94305593 94307721 + protein_coding KNOWN OTTHUMG00000167776.2 2129 826 8 ENSG00000123901.7 GPR83 chr11 94377311 94401419 - protein_coding KNOWN OTTHUMG00000167779.2 24109 4282 7 ENSG00000207134.1 RNU6-106P chr1 155358712 155358818 - snRNA KNOWN NA 107 107 1 ENSG00000020922.11 MRE11A chr11 94415578 94493908 - protein_coding KNOWN OTTHUMG00000167780.5 78331 7689 109 ENSG00000221230.1 MIR548L chr11 94466495 94466580 - miRNA KNOWN NA 86 86 1 ENSG00000255893.1 RP11-685N10.1 chr11 94472908 94473570 - antisense NOVEL OTTHUMG00000167781.1 663 581 2 ENSG00000168876.7 ANKRD49 chr11 94493629 94499583 + protein_coding KNOWN OTTHUMG00000167793.2 5955 3526 29 ENSG00000257057.1 C11orf97 chr11 94512581 94532123 + lincRNA NOVEL OTTHUMG00000167794.1 19543 552 4 ENSG00000134627.10 PIWIL4 chr11 94543840 94621421 + protein_coding KNOWN OTTHUMG00000167811.1 77582 4558 62 ENSG00000196371.3 FUT4 chr11 94543840 94549898 + protein_coding KNOWN OTTHUMG00000167795.2 6059 6059 1 ENSG00000255929.4 RP11-867G2.8 chr11 94545330 94740355 - antisense NOVEL OTTHUMG00000167821.1 195026 1175 9 ENSG00000280167.1 RP11-867G2.4 chr11 94559018 94559374 + TEC KNOWN OTTHUMG00000167808.1 357 357 1 ENSG00000233536.2 RP11-867G2.5 chr11 94638038 94640833 + lincRNA NOVEL OTTHUMG00000167809.1 2796 712 6 ENSG00000278757.1 U6 chr1 516376 516479 - snRNA NOVEL NA 104 104 1 ENSG00000130939.17 UBE4B chr1 10032832 10181239 + protein_coding KNOWN OTTHUMG00000001797.2 148408 9128 95 ENSG00000227773.1 ASH1L-IT1 chr1 155396010 155396978 - sense_intronic NOVEL OTTHUMG00000014015.1 969 448 2 ENSG00000255666.4 RP11-867G2.6 chr11 94641907 94651631 + lincRNA NOVEL OTTHUMG00000167810.1 9725 908 19 ENSG00000166025.16 AMOTL1 chr11 94706431 94876753 + protein_coding KNOWN OTTHUMG00000167828.3 170323 10035 35 ENSG00000256469.1 RP11-856F16.2 chr11 94874052 94925521 - antisense NOVEL OTTHUMG00000167864.1 51470 593 2 ENSG00000213368.3 ST13P11 chr11 94913047 94913766 + processed_pseudogene KNOWN OTTHUMG00000167837.1 720 720 1 ENSG00000150316.10 CWC15 chr11 94962622 94973612 - protein_coding KNOWN OTTHUMG00000181616.2 10991 2758 27 ENSG00000186280.6 KDM4D chr11 94973681 94999518 + protein_coding KNOWN OTTHUMG00000167838.4 25838 2978 6 ENSG00000255653.1 RP11-60C6.3 chr11 95011858 95012532 + unprocessed_pseudogene KNOWN OTTHUMG00000167857.1 675 675 1 ENSG00000235268.2 KDM4E chr11 95025258 95027596 + protein_coding KNOWN OTTHUMG00000167858.1 2339 2339 1 ENSG00000274486.1 RP11-60C6.8 chr11 95030549 95031245 + unprocessed_pseudogene KNOWN OTTHUMG00000187777.1 697 697 1 ENSG00000256779.1 RP11-60C6.5 chr11 95037482 95038456 + processed_pseudogene KNOWN OTTHUMG00000167859.1 975 975 1 ENSG00000207144.1 RNU6-1297P chr1 155419397 155419500 + snRNA KNOWN NA 104 104 1 ENSG00000257012.1 RP11-60C6.6 chr11 95040411 95041571 + unprocessed_pseudogene KNOWN OTTHUMG00000167861.1 1161 1161 1 ENSG00000255855.1 RP11-735A19.2 chr11 95049422 95050945 + unprocessed_pseudogene KNOWN OTTHUMG00000167862.1 1524 1524 1 ENSG00000277984.1 RP11-735A19.3 chr11 95057282 95057984 + unprocessed_pseudogene KNOWN OTTHUMG00000187778.1 703 703 1 ENSG00000263465.3 SRSF8 chr11 95067197 95071224 + protein_coding KNOWN OTTHUMG00000188534.2 4028 4028 1 ENSG00000149218.4 ENDOD1 chr11 95089810 95132645 + protein_coding KNOWN OTTHUMG00000167835.1 42836 4687 2 ENSG00000270689.1 RP11-712B9.4 chr11 95143637 95145125 + processed_pseudogene KNOWN OTTHUMG00000184754.1 1489 1489 1 ENSG00000270578.1 RP11-712B9.5 chr11 95145437 95146004 + processed_pseudogene KNOWN OTTHUMG00000184755.1 568 568 1 ENSG00000245552.5 RP11-712B9.2 chr11 95150539 95234104 + antisense NOVEL OTTHUMG00000167830.2 83566 5320 27 ENSG00000149212.9 SESN3 chr11 95165540 95232541 - protein_coding KNOWN OTTHUMG00000167829.3 67002 10353 33 ENSG00000276602.2 AP000787.1 chr11 95254503 95254621 + miRNA NOVEL NA 119 119 1 ENSG00000237872.4 POU5F1P4 chr1 155433178 155434262 + processed_pseudogene KNOWN OTTHUMG00000014016.2 1085 1085 1 ENSG00000201204.1 Y_RNA chr11 95473272 95473374 - misc_RNA NOVEL NA 103 103 1 ENSG00000250390.2 RP11-338H14.1 chr11 95482406 95497553 + lincRNA NOVEL OTTHUMG00000167737.1 15148 570 3 ENSG00000255605.1 RP11-644L4.1 chr11 95698086 95700623 + lincRNA NOVEL OTTHUMG00000167738.1 2538 506 3 ENSG00000273600.1 CTD-2564P9.3 chr11 95756959 95757442 - processed_pseudogene KNOWN OTTHUMG00000187779.1 484 484 1 ENSG00000077458.11 FAM76B chr11 95768942 95790409 - protein_coding KNOWN OTTHUMG00000167739.1 21468 6042 79 ENSG00000166037.9 CEP57 chr11 95789965 95832693 + protein_coding KNOWN OTTHUMG00000167740.1 42729 7101 109 ENSG00000087053.17 MTMR2 chr11 95832882 95925315 - protein_coding KNOWN OTTHUMG00000153837.2 92434 6119 134 ENSG00000222578.1 RNA5SP345 chr11 95840017 95840124 - rRNA KNOWN NA 108 108 1 ENSG00000242993.1 RP11-697H10.1 chr11 95963219 95963624 + processed_pseudogene KNOWN OTTHUMG00000158441.2 406 406 1 ENSG00000184384.12 MAML2 chr11 95976598 96343180 - protein_coding KNOWN OTTHUMG00000167677.1 366583 7109 9 ENSG00000235919.4 ASH1L-AS1 chr1 155562042 155563944 + antisense NOVEL OTTHUMG00000014012.3 1903 1209 4 ENSG00000216073.3 AP000870.1 chr11 95990932 95991017 - miRNA NOVEL NA 86 86 1 ENSG00000266192.2 MIR1260B chr11 96341427 96341534 + miRNA KNOWN NA 108 108 1 ENSG00000149231.10 CCDC82 chr11 96352769 96389923 - protein_coding KNOWN OTTHUMG00000167678.2 37155 6850 30 ENSG00000183340.6 JRKL chr11 96389989 96507574 + protein_coding KNOWN OTTHUMG00000154950.2 117586 3511 5 ENSG00000255679.1 JRKL-AS1 chr11 96447132 96506826 - lincRNA NOVEL OTTHUMG00000167708.1 59695 426 4 ENSG00000200411.1 RNA5SP346 chr11 96474572 96474692 - rRNA KNOWN NA 121 121 1 ENSG00000256684.1 RP11-49K4.2 chr11 96508425 96514748 + lincRNA NOVEL OTTHUMG00000167709.1 6324 404 4 ENSG00000254587.1 RP11-360K13.1 chr11 96590317 96713822 + lincRNA NOVEL OTTHUMG00000167665.1 123506 1647 4 ENSG00000255376.1 RP11-360K13.2 chr11 96642671 96643225 - processed_pseudogene KNOWN OTTHUMG00000167666.1 555 555 1 ENSG00000255205.1 MED28P5 chr11 97000274 97000711 - processed_pseudogene KNOWN OTTHUMG00000167667.1 438 438 1 ENSG00000271267.1 RP11-29H23.7 chr1 155566050 155566306 - processed_pseudogene KNOWN OTTHUMG00000184416.1 257 257 1 ENSG00000270753.1 RP11-693I21.1 chr11 97086160 97086682 - processed_pseudogene KNOWN OTTHUMG00000184799.1 523 523 1 ENSG00000255039.1 RP11-882G5.1 chr11 97222644 97259987 - lincRNA NOVEL OTTHUMG00000167664.1 37344 734 3 ENSG00000199315.1 RNA5SP347 chr11 97657464 97657582 + rRNA KNOWN NA 119 119 1 ENSG00000255502.4 RP11-379J13.2 chr11 97878781 97942762 - lincRNA NOVEL OTTHUMG00000167597.1 63982 1100 7 ENSG00000254555.1 RP11-379J13.1 chr11 97908253 97908537 - processed_pseudogene KNOWN OTTHUMG00000167598.1 285 285 1 ENSG00000255380.1 RP11-684B20.1 chr11 98130239 98131198 - processed_pseudogene KNOWN OTTHUMG00000167599.1 960 960 1 ENSG00000254939.1 CTD-2342I9.1 chr11 98565074 98566827 - processed_pseudogene KNOWN OTTHUMG00000167600.1 1754 1754 1 ENSG00000254599.1 RP11-115E19.1 chr11 98676391 98683735 + lincRNA NOVEL OTTHUMG00000167601.1 7345 435 3 ENSG00000254830.1 RP11-99C10.1 chr11 98938912 98945079 - lincRNA NOVEL OTTHUMG00000167602.1 6168 380 2 ENSG00000149972.9 CNTN5 chr11 99020953 100358885 + protein_coding KNOWN OTTHUMG00000167579.2 1337933 9103 173 ENSG00000225082.2 DAP3P1 chr1 155586644 155602197 + unprocessed_pseudogene KNOWN OTTHUMG00000014013.2 15554 278 3 ENSG00000223269.1 RN7SKP53 chr11 99120176 99120490 + misc_RNA KNOWN NA 315 315 1 ENSG00000266616.1 AP003558.1 chr11 99424938 99425005 - miRNA NOVEL NA 68 68 1 ENSG00000255547.1 RPA2P3 chr11 100336856 100337625 + processed_pseudogene KNOWN OTTHUMG00000167592.1 770 770 1 ENSG00000242165.3 RN7SL222P chr11 100641975 100642273 - misc_RNA KNOWN NA 299 299 1 ENSG00000255059.1 AP000620.1 chr11 100666459 100666962 + processed_pseudogene KNOWN OTTHUMG00000167575.1 504 504 1 ENSG00000248027.1 CTD-2383M3.1 chr11 100684162 100687955 - antisense NOVEL OTTHUMG00000167576.1 3794 1865 2 ENSG00000165895.16 ARHGAP42 chr11 100687653 100991937 + protein_coding KNOWN OTTHUMG00000167530.3 304285 6944 85 ENSG00000265208.2 AC015600.1 chr11 100794450 100794535 + miRNA NOVEL NA 86 86 1 ENSG00000200047.1 RN7SKP115 chr11 100839630 100839946 + misc_RNA KNOWN NA 317 317 1 ENSG00000170647.3 TMEM133 chr11 100991989 100993941 + protein_coding KNOWN OTTHUMG00000167577.1 1953 1953 1 ENSG00000223503.1 RP11-29H23.6 chr1 155590601 155591262 - processed_pseudogene KNOWN OTTHUMG00000057605.1 662 662 1 ENSG00000082175.13 PGR chr11 101029624 101130524 - protein_coding KNOWN OTTHUMG00000167531.1 100901 15306 63 ENSG00000255504.1 RP11-788M5.3 chr11 101148150 101209591 + transcribed_processed_pseudogene KNOWN OTTHUMG00000167532.1 61442 867 4 ENSG00000137672.11 TRPC6 chr11 101451564 101872562 - protein_coding KNOWN OTTHUMG00000167483.2 420999 5537 54 ENSG00000263885.1 MIR3920 chr11 101519820 101519905 - miRNA KNOWN NA 86 86 1 ENSG00000254506.1 RP11-748H22.1 chr11 101584295 101595156 + transcribed_processed_pseudogene KNOWN OTTHUMG00000167485.1 10862 2371 4 ENSG00000254534.1 RP11-748H22.2 chr11 101765935 101769961 - unprocessed_pseudogene KNOWN OTTHUMG00000167499.1 4027 1663 2 ENSG00000187151.6 ANGPTL5 chr11 101890674 101916522 - protein_coding KNOWN OTTHUMG00000167318.1 25849 2368 14 ENSG00000110318.12 KIAA1377 chr11 101915015 102001058 + protein_coding KNOWN OTTHUMG00000167319.2 86044 8191 25 ENSG00000137691.11 C11orf70 chr11 102047443 102084560 + protein_coding KNOWN OTTHUMG00000167320.1 37118 2647 25 ENSG00000274097.1 5S_rRNA chr11 102057854 102057960 + rRNA NOVEL NA 107 107 1 ENSG00000232519.2 RP11-29H23.4 chr1 155609776 155610380 - antisense NOVEL OTTHUMG00000014027.2 605 220 2 ENSG00000260008.1 RP11-732A21.2 chr11 102107886 102109842 + lincRNA NOVEL OTTHUMG00000167321.1 1957 1957 1 ENSG00000277459.1 RP11-732A21.3 chr11 102109827 102110457 - lincRNA NOVEL OTTHUMG00000188237.1 631 631 1 ENSG00000137693.12 YAP1 chr11 102110461 102233423 + protein_coding KNOWN OTTHUMG00000167322.2 122963 6296 76 ENSG00000254422.1 RP11-864G5.3 chr11 102229851 102230922 - antisense NOVEL OTTHUMG00000167323.1 1072 628 2 ENSG00000243777.1 RP11-864G5.1 chr11 102295060 102295806 + processed_pseudogene KNOWN OTTHUMG00000158444.1 747 747 1 ENSG00000270868.1 RP11-864G5.7 chr11 102306112 102306271 + processed_pseudogene KNOWN OTTHUMG00000184750.1 160 160 1 ENSG00000271600.1 RP11-864G5.8 chr11 102308557 102308797 - processed_pseudogene KNOWN OTTHUMG00000184796.1 241 241 1 ENSG00000212466.1 RNU6-952P chr11 102313722 102313829 + snRNA KNOWN NA 108 108 1 ENSG00000023445.12 BIRC3 chr11 102317450 102339403 + protein_coding KNOWN OTTHUMG00000167324.3 21954 7518 44 ENSG00000110330.7 BIRC2 chr11 102347211 102378670 + protein_coding KNOWN OTTHUMG00000167325.1 31460 4532 81 ENSG00000125459.13 MSTO1 chr1 155610205 155614967 + protein_coding KNOWN OTTHUMG00000014014.6 4763 4208 139 ENSG00000152558.13 TMEM123 chr11 102396332 102470384 - protein_coding KNOWN OTTHUMG00000167326.1 74053 4647 32 ENSG00000255337.1 RP11-315O6.1 chr11 102452919 102462008 + antisense NOVEL OTTHUMG00000167327.1 9090 692 2 ENSG00000255482.1 RP11-315O6.2 chr11 102467255 102498801 + antisense NOVEL OTTHUMG00000167328.1 31547 494 3 ENSG00000137673.7 MMP7 chr11 102520508 102530753 - protein_coding KNOWN OTTHUMG00000048193.2 10246 2323 13 ENSG00000137674.3 MMP20 chr11 102576835 102625332 - protein_coding NOVEL OTTHUMG00000168081.2 48498 2551 18 ENSG00000256916.1 RP11-817J15.2 chr11 102606916 102628070 + antisense NOVEL OTTHUMG00000168097.1 21155 1400 7 ENSG00000281655.1 RP11-817J15.3 chr11 102681310 102683913 + lincRNA NOVEL OTTHUMG00000168098.2 2604 721 3 ENSG00000137675.4 MMP27 chr11 102691487 102705806 - protein_coding KNOWN OTTHUMG00000168099.1 14320 1913 10 ENSG00000118113.10 MMP8 chr11 102711795 102727050 - protein_coding KNOWN OTTHUMG00000167587.3 15256 3438 45 ENSG00000255282.5 WTAPP1 chr11 102746968 102836766 + transcribed_processed_pseudogene KNOWN OTTHUMG00000165847.4 89799 3331 20 ENSG00000246203.2 RP11-29H23.5 chr1 155614726 155660245 - unprocessed_pseudogene KNOWN OTTHUMG00000014028.1 45520 2505 9 ENSG00000225678.2 AP000619.5 chr11 102751070 102754943 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000168082.3 3874 1000 9 ENSG00000256254.1 AP000647.3 chr11 102766801 102767927 - processed_pseudogene KNOWN OTTHUMG00000168129.1 1127 1127 1 ENSG00000166670.8 MMP10 chr11 102770503 102780628 - protein_coding KNOWN OTTHUMG00000168083.1 10126 1758 14 ENSG00000196611.4 MMP1 chr11 102789920 102798160 - protein_coding KNOWN OTTHUMG00000048192.1 8241 1970 10 ENSG00000256035.1 AP000619.6 chr11 102806948 102807916 - processed_pseudogene KNOWN OTTHUMG00000168130.1 969 969 1 ENSG00000149968.10 MMP3 chr11 102835801 102843803 - protein_coding KNOWN OTTHUMG00000048254.2 8003 2048 17 ENSG00000262406.2 MMP12 chr11 102862736 102875034 - protein_coding KNOWN OTTHUMG00000165848.3 12299 1874 10 ENSG00000255469.1 BOLA3P1 chr11 102880492 102880846 + processed_pseudogene KNOWN OTTHUMG00000165849.1 355 355 1 ENSG00000238562.1 RNU7-159P chr11 102903892 102903953 - snRNA KNOWN NA 62 62 1 ENSG00000137745.10 MMP13 chr11 102942995 102955734 - protein_coding KNOWN OTTHUMG00000165850.1 12740 2834 30 ENSG00000224340.1 RP11-496H15.2 chr1 10054445 10054781 - processed_pseudogene KNOWN OTTHUMG00000001800.1 337 337 1 ENSG00000163374.18 YY1AP1 chr1 155659443 155689000 - protein_coding KNOWN OTTHUMG00000035437.7 29558 5001 219 ENSG00000276521.1 RP11-690D19.4 chr11 102963460 102966628 - unprocessed_pseudogene KNOWN OTTHUMG00000187782.1 3169 372 3 ENSG00000239861.1 RP11-690D19.1 chr11 103045237 103045712 + processed_pseudogene KNOWN OTTHUMG00000158445.1 476 476 1 ENSG00000260966.1 RP11-690D19.3 chr11 103050687 103055799 - sense_overlapping NOVEL OTTHUMG00000173208.1 5113 5113 1 ENSG00000137692.10 DCUN1D5 chr11 103062076 103092215 - protein_coding KNOWN OTTHUMG00000165822.3 30140 1700 63 ENSG00000187240.12 DYNC2H1 chr11 103109431 103479863 + protein_coding KNOWN OTTHUMG00000165941.1 370433 14284 236 ENSG00000254895.2 RP11-37O16.7 chr11 103402013 103402586 - processed_pseudogene KNOWN OTTHUMG00000165942.2 574 574 1 ENSG00000254931.2 RP11-37O16.6 chr11 103402588 103403422 - processed_pseudogene KNOWN OTTHUMG00000165943.2 835 835 1 ENSG00000255417.1 RP11-37O16.4 chr11 103403512 103404167 - processed_pseudogene KNOWN OTTHUMG00000165945.1 656 656 1 ENSG00000255350.1 RP11-37O16.3 chr11 103404309 103405834 - processed_pseudogene KNOWN OTTHUMG00000165946.1 1526 1526 1 ENSG00000254565.1 MTND2P26 chr11 103406213 103407241 - processed_pseudogene KNOWN OTTHUMG00000165947.1 1029 1029 1 ENSG00000132676.14 DAP3 chr1 155687960 155739010 + protein_coding KNOWN OTTHUMG00000035439.4 51051 4588 168 ENSG00000253245.2 MTND1P36 chr11 103407441 103408376 - processed_pseudogene KNOWN OTTHUMG00000165948.1 936 936 1 ENSG00000254824.1 RP11-37O16.8 chr11 103409580 103409657 - processed_pseudogene KNOWN OTTHUMG00000165949.1 78 78 1 ENSG00000254987.1 RP11-563P16.1 chr11 103675994 103895271 - lincRNA NOVEL OTTHUMG00000165952.1 219278 562 5 ENSG00000264200.1 MIR4693 chr11 103849906 103849980 + miRNA KNOWN NA 75 75 1 ENSG00000170962.11 PDGFD chr11 103907186 104164379 - protein_coding KNOWN OTTHUMG00000165953.2 257194 4266 18 ENSG00000255548.1 RP11-617B3.2 chr11 103945548 103946546 + antisense NOVEL OTTHUMG00000165989.1 999 547 2 ENSG00000170967.4 DDI1 chr11 104036580 104039188 + protein_coding KNOWN OTTHUMG00000165990.1 2609 2609 1 ENSG00000256422.4 RP11-886D15.1 chr11 104445868 104609321 - lincRNA NOVEL OTTHUMG00000165998.1 163454 1289 13 ENSG00000270449.1 RP11-681H10.1 chr11 104682383 104682581 - processed_pseudogene KNOWN OTTHUMG00000184795.1 199 199 1 ENSG00000254569.1 RP11-693N9.1 chr11 104873264 104873417 + unprocessed_pseudogene KNOWN OTTHUMG00000165999.1 154 154 1 ENSG00000227673.1 RP11-243J18.2 chr1 155710098 155710563 - antisense NOVEL OTTHUMG00000035438.1 466 157 2 ENSG00000204403.8 CASP12 chr11 104885718 104898670 - polymorphic_pseudogene KNOWN OTTHUMG00000154965.4 12953 1786 77 ENSG00000235505.6 RP11-693N9.2 chr11 104901549 104919073 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000166076.2 17525 4307 41 ENSG00000196954.11 CASP4 chr11 104942866 104969436 - protein_coding KNOWN OTTHUMG00000166078.2 26571 7256 71 ENSG00000137757.9 CASP5 chr11 104994235 105023168 - protein_coding KNOWN OTTHUMG00000048073.5 28934 1592 69 ENSG00000137752.21 CASP1 chr11 105025443 105035250 - protein_coding KNOWN OTTHUMG00000048072.3 9808 3698 100 ENSG00000204397.6 CARD16 chr11 105041326 105101431 - protein_coding KNOWN OTTHUMG00000166157.1 60106 1688 16 ENSG00000254750.1 CASP1P2 chr11 105063345 105071541 - unprocessed_pseudogene KNOWN OTTHUMG00000166162.1 8197 1258 9 ENSG00000255221.2 CARD17 chr11 105092469 105101431 - protein_coding KNOWN OTTHUMG00000166163.1 8963 466 4 ENSG00000255430.1 CASP1P1 chr11 105122661 105123339 - unprocessed_pseudogene KNOWN OTTHUMG00000166164.1 679 212 2 ENSG00000255501.1 CARD18 chr11 105137721 105139726 - protein_coding KNOWN OTTHUMG00000166165.2 2006 940 8 ENSG00000203761.5 MSTO2P chr1 155745829 155750137 + unprocessed_pseudogene KNOWN OTTHUMG00000035441.2 4309 1709 14 ENSG00000254998.1 RP11-94P11.4 chr11 105157927 105531697 - lincRNA NOVEL OTTHUMG00000166221.2 373771 445 5 ENSG00000254767.1 OR2AL1P chr11 105194440 105194946 - unprocessed_pseudogene KNOWN OTTHUMG00000166222.1 507 507 1 ENSG00000255336.1 RP11-94P11.3 chr11 105246880 105247060 - unprocessed_pseudogene KNOWN OTTHUMG00000166223.1 181 181 1 ENSG00000278640.1 Metazoa_SRP chr11 105352670 105352956 - misc_RNA NOVEL NA 287 287 1 ENSG00000152578.11 GRIA4 chr11 105609994 105982092 + protein_coding KNOWN OTTHUMG00000166236.2 372099 10083 121 ENSG00000255403.1 AP000641.1 chr11 105706299 105707937 + processed_pseudogene KNOWN OTTHUMG00000166237.1 1639 1639 1 ENSG00000222663.1 RNU4-55P chr11 105824634 105824770 + snRNA KNOWN NA 137 137 1 ENSG00000263371.2 AP000673.1 chr11 105933951 105934034 + miRNA NOVEL NA 84 84 1 ENSG00000252081.1 RNU6-277P chr11 105974826 105974931 - snRNA KNOWN NA 106 106 1 ENSG00000170903.9 MSANTD4 chr11 105995623 106022403 - protein_coding KNOWN OTTHUMG00000166240.1 26781 5105 17 ENSG00000116580.17 GON4L chr1 155749662 155859400 - protein_coding KNOWN OTTHUMG00000014106.4 109739 11967 267 ENSG00000182359.13 KBTBD3 chr11 106051098 106077765 - protein_coding KNOWN OTTHUMG00000166251.3 26668 5516 17 ENSG00000149313.9 AASDHPPT chr11 106075501 106098710 + protein_coding KNOWN OTTHUMG00000166253.1 23210 6183 22 ENSG00000254433.1 RP11-677I18.3 chr11 106085990 106101975 - antisense NOVEL OTTHUMG00000166254.1 15986 1247 7 ENSG00000254580.1 RP11-677I18.4 chr11 106112459 106132116 - lincRNA NOVEL OTTHUMG00000166293.1 19658 409 3 ENSG00000281713.1 AP001001.1 chr11 106139000 106139077 - miRNA NOVEL NA 78 78 1 ENSG00000254811.4 RP11-680E19.1 chr11 106250019 106264905 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000166294.1 14887 3268 12 ENSG00000255065.1 RP11-680E19.2 chr11 106310045 106311791 + processed_pseudogene KNOWN OTTHUMG00000166295.1 1747 1469 2 ENSG00000152402.9 GUCY1A2 chr11 106674012 107018524 - protein_coding KNOWN OTTHUMG00000166296.2 344513 16361 26 ENSG00000264542.1 AP001282.1 chr11 106801349 106801492 - miRNA NOVEL NA 144 144 1 ENSG00000274584.1 RP11-819M15.2 chr11 106824025 106824954 + unprocessed_pseudogene KNOWN OTTHUMG00000187783.1 930 309 2 ENSG00000234937.1 RP11-101O6.2 chr1 155845367 155846624 + processed_pseudogene KNOWN OTTHUMG00000014102.1 1258 941 2 ENSG00000213252.3 RP11-819M15.1 chr11 106826392 106827890 - processed_pseudogene KNOWN OTTHUMG00000166298.1 1499 1499 1 ENSG00000255353.1 RP11-382M14.1 chr11 107176286 107177530 + processed_pseudogene KNOWN OTTHUMG00000166299.1 1245 1245 1 ENSG00000261098.1 RP11-819C21.1 chr11 107312132 107316271 - lincRNA NOVEL OTTHUMG00000172986.1 4140 4140 1 ENSG00000152404.14 CWF19L2 chr11 107326345 107457844 - protein_coding KNOWN OTTHUMG00000152975.2 131500 3581 51 ENSG00000225215.1 SMARCE1P1 chr11 107403404 107404589 - processed_pseudogene KNOWN OTTHUMG00000152976.1 1186 1186 1 ENSG00000137760.13 ALKBH8 chr11 107502726 107565746 - protein_coding KNOWN OTTHUMG00000157008.2 63021 4506 67 ENSG00000270969.1 CTD-2355J17.2 chr11 107585901 107586903 - processed_pseudogene KNOWN OTTHUMG00000184788.1 1003 1003 1 ENSG00000110675.11 ELMOD1 chr11 107591091 107666779 + protein_coding KNOWN OTTHUMG00000166361.1 75689 5856 47 ENSG00000255483.1 AP000889.2 chr11 107600379 107600868 - processed_pseudogene KNOWN OTTHUMG00000166362.1 490 490 1 ENSG00000273930.1 AP000889.3 chr11 107614347 107614456 - miRNA NOVEL NA 110 110 1 ENSG00000132718.8 SYT11 chr1 155859509 155885199 + protein_coding KNOWN OTTHUMG00000014105.1 25691 5240 4 ENSG00000254758.1 AP000889.1 chr11 107642887 107643871 - unprocessed_pseudogene KNOWN OTTHUMG00000166363.1 985 660 2 ENSG00000170290.3 SLN chr11 107707378 107719693 - protein_coding KNOWN OTTHUMG00000166364.1 12316 906 7 ENSG00000254702.1 CTD-2651C21.3 chr11 107736009 107738718 - processed_pseudogene KNOWN OTTHUMG00000166365.1 2710 1599 2 ENSG00000110660.13 SLC35F2 chr11 107790991 107928293 - protein_coding KNOWN OTTHUMG00000166366.2 137303 3717 46 ENSG00000240652.1 RP11-832N8.1 chr11 107908420 107908764 + processed_pseudogene KNOWN OTTHUMG00000158451.1 345 345 1 ENSG00000179331.2 RAB39A chr11 107928503 107963482 + protein_coding KNOWN OTTHUMG00000166367.1 34980 1830 2 ENSG00000276237.1 AP003307.1 chr11 107957902 107958009 - miRNA NOVEL NA 108 108 1 ENSG00000166266.12 CUL5 chr11 108008733 108107776 + protein_coding KNOWN OTTHUMG00000166369.2 99044 6742 53 ENSG00000200855.1 Y_RNA chr11 108084913 108085014 + misc_RNA NOVEL NA 102 102 1 ENSG00000255467.1 RP11-144G7.2 chr11 108105074 108121684 - antisense NOVEL OTTHUMG00000166384.1 16611 964 4 ENSG00000143622.9 RIT1 chr1 155897808 155911404 - protein_coding KNOWN OTTHUMG00000014104.2 13597 3919 31 ENSG00000075239.12 ACAT1 chr11 108121516 108147776 + protein_coding KNOWN OTTHUMG00000166381.1 26261 5584 61 ENSG00000149308.15 NPAT chr11 108157215 108222642 - protein_coding KNOWN OTTHUMG00000166385.2 65428 7534 46 ENSG00000149311.16 ATM chr11 108222484 108369102 + protein_coding KNOWN OTTHUMG00000166480.5 146619 22317 289 ENSG00000206967.1 Y_RNA chr11 108229503 108229604 - misc_RNA NOVEL NA 102 102 1 ENSG00000166323.11 C11orf65 chr11 108308519 108467531 - protein_coding KNOWN OTTHUMG00000166489.4 159013 3524 61 ENSG00000221607.1 AP005718.1 chr11 108469455 108469552 - miRNA NOVEL NA 98 98 1 ENSG00000178202.11 KDELC2 chr11 108472105 108498432 - protein_coding KNOWN OTTHUMG00000166535.1 26328 4993 33 ENSG00000110723.10 EXPH5 chr11 108505431 108593738 - protein_coding KNOWN OTTHUMG00000166536.4 88308 10843 30 ENSG00000178105.8 DDX10 chr11 108665025 108940930 + protein_coding KNOWN OTTHUMG00000166540.1 275906 8461 51 ENSG00000240698.1 RPS2P39 chr11 108690289 108690956 - processed_pseudogene KNOWN OTTHUMG00000158452.1 668 668 1 ENSG00000132680.9 KIAA0907 chr1 155913043 155934400 - protein_coding KNOWN OTTHUMG00000014103.1 21358 5635 71 ENSG00000254730.1 RP11-801G16.2 chr11 108727741 108730104 - processed_pseudogene KNOWN OTTHUMG00000166542.1 2364 320 2 ENSG00000255379.1 CYCSP29 chr11 108822333 108822650 - processed_pseudogene KNOWN OTTHUMG00000166543.1 318 318 1 ENSG00000203334.4 RP11-25I9.3 chr11 108957718 108959797 + lincRNA NOVEL OTTHUMG00000186821.1 2080 2080 4 ENSG00000255528.1 RP11-25I9.2 chr11 109002465 109037967 - lincRNA NOVEL OTTHUMG00000166544.1 35503 333 2 ENSG00000201243.1 RNU6-654P chr11 109005517 109005623 + snRNA KNOWN NA 107 107 1 ENSG00000200613.1 RNA5SP349 chr11 109120878 109120986 - rRNA KNOWN NA 109 109 1 ENSG00000264997.1 SNORD39 chr11 109263494 109263564 - snoRNA NOVEL NA 71 71 1 ENSG00000255028.4 RP11-708B6.2 chr11 109355085 109583907 - antisense NOVEL OTTHUMG00000166558.1 228823 1091 9 ENSG00000185742.6 C11orf87 chr11 109422120 109429114 + protein_coding KNOWN OTTHUMG00000166559.1 6995 5884 2 ENSG00000254890.1 RP11-10A7.1 chr11 109486968 109487424 - processed_pseudogene KNOWN OTTHUMG00000166560.1 457 457 1 ENSG00000207475.1 SNORA80E chr1 155919909 155920045 - snoRNA KNOWN NA 137 137 1 ENSG00000254482.1 RP11-386B1.1 chr11 109637468 109638128 - processed_pseudogene KNOWN OTTHUMG00000166561.1 661 661 1 ENSG00000254659.2 RP11-262A12.1 chr11 109751442 109823847 - lincRNA NOVEL OTTHUMG00000166562.3 72406 620 5 ENSG00000254798.1 TFAMP2 chr11 109907004 109907741 - processed_pseudogene KNOWN OTTHUMG00000166570.1 738 738 1 ENSG00000224776.3 RP11-361A21.1 chr11 109982192 109983043 + processed_pseudogene KNOWN OTTHUMG00000158453.1 852 852 1 ENSG00000270423.1 RP11-361A21.3 chr11 109985243 109985660 - processed_pseudogene KNOWN OTTHUMG00000184787.1 418 418 1 ENSG00000255210.1 RP11-344L21.1 chr11 110049528 110050160 + processed_pseudogene KNOWN OTTHUMG00000166571.1 633 633 1 ENSG00000149289.9 ZC3H12C chr11 110093361 110171841 + protein_coding KNOWN OTTHUMG00000166572.1 78481 9719 17 ENSG00000137710.13 RDX chr11 110174880 110296722 - protein_coding KNOWN OTTHUMG00000166574.2 121843 6592 148 ENSG00000254416.4 RP11-347E10.1 chr11 110355130 110406400 + lincRNA NOVEL OTTHUMG00000166588.1 51271 781 6 ENSG00000137714.2 FDX1 chr11 110429883 110464881 + protein_coding KNOWN OTTHUMG00000166589.1 34999 3206 4 ENSG00000233623.2 PGAM1P11 chr1 10058671 10059648 + processed_pseudogene KNOWN OTTHUMG00000001802.2 978 680 2 ENSG00000281394.1 SCARNA4 chr1 155925958 155926086 - scaRNA KNOWN NA 129 129 1 ENSG00000137727.11 ARHGAP20 chr11 110577042 110713189 - protein_coding KNOWN OTTHUMG00000166590.2 136148 7125 83 ENSG00000233497.4 HNRNPA1P60 chr11 110788026 110788976 - processed_pseudogene KNOWN OTTHUMG00000166646.1 951 951 1 ENSG00000255149.1 RP11-97I14.1 chr11 110876994 110877177 - processed_pseudogene KNOWN OTTHUMG00000166647.1 184 184 1 ENSG00000200168.1 RNA5SP350 chr11 111040098 111040208 - rRNA KNOWN NA 111 111 1 ENSG00000271390.1 RP11-89C3.3 chr11 111089870 111090368 - lincRNA NOVEL OTTHUMG00000185165.1 499 499 1 ENSG00000271584.1 RP11-89C3.4 chr11 111091932 111097357 - lincRNA NOVEL OTTHUMG00000185166.1 5426 508 2 ENSG00000239354.1 RPS17P15 chr11 111105547 111105895 - processed_pseudogene KNOWN OTTHUMG00000158454.1 349 349 1 ENSG00000270202.1 RP11-89C3.2 chr11 111107060 111107750 - processed_pseudogene KNOWN OTTHUMG00000184786.1 691 691 1 ENSG00000150750.6 C11orf53 chr11 111255982 111286401 + protein_coding KNOWN OTTHUMG00000166656.1 30420 1205 4 ENSG00000196167.8 COLCA1 chr11 111290787 111305045 - antisense KNOWN OTTHUMG00000166658.2 14259 8733 10 ENSG00000280466.1 SCARNA15 chr1 155925958 155926085 - scaRNA NOVEL NA 128 128 1 ENSG00000214290.6 COLCA2 chr11 111298546 111308735 + protein_coding KNOWN OTTHUMG00000166657.1 10190 2068 25 ENSG00000264032.1 MIR4491 chr11 111347757 111347824 + miRNA KNOWN NA 68 68 1 ENSG00000110777.10 POU2AF1 chr11 111352252 111455630 - protein_coding KNOWN OTTHUMG00000166659.2 103379 7416 41 ENSG00000253099.1 RNU2-60P chr11 111383092 111383219 + snRNA KNOWN NA 128 128 1 ENSG00000255428.1 RP11-794P6.1 chr11 111414242 111418186 - sense_intronic NOVEL OTTHUMG00000166660.1 3945 2587 4 ENSG00000255208.1 RP11-794P6.3 chr11 111449868 111451311 + antisense NOVEL OTTHUMG00000166716.1 1444 521 5 ENSG00000255093.1 RP11-794P6.2 chr11 111451339 111458151 + antisense NOVEL OTTHUMG00000166717.1 6813 1172 9 ENSG00000137707.12 BTG4 chr11 111467526 111512354 - protein_coding KNOWN OTTHUMG00000166718.1 44829 1801 15 ENSG00000207811.2 MIR34B chr11 111512931 111513040 + miRNA KNOWN NA 110 110 1 ENSG00000207562.2 MIR34C chr11 111513431 111513538 + miRNA KNOWN NA 108 108 1 ENSG00000173080.5 RXFP4 chr1 155941710 155942949 + protein_coding KNOWN OTTHUMG00000017463.1 1240 1240 1 ENSG00000254980.1 RP11-794P6.6 chr11 111514043 111526755 - antisense NOVEL OTTHUMG00000166719.1 12713 1155 2 ENSG00000183644.12 C11orf88 chr11 111514785 111537031 + protein_coding KNOWN OTTHUMG00000166720.1 22247 3280 24 ENSG00000204381.10 LAYN chr11 111540280 111561745 + protein_coding KNOWN OTTHUMG00000166721.2 21466 3144 62 ENSG00000170145.4 SIK2 chr11 111602391 111730853 + protein_coding KNOWN OTTHUMG00000150644.3 128463 9796 18 ENSG00000235286.1 AP000925.2 chr11 111670956 111672404 - processed_pseudogene KNOWN OTTHUMG00000150647.1 1449 1449 1 ENSG00000223324.1 RN7SKP273 chr11 111683111 111683424 + misc_RNA KNOWN NA 314 314 1 ENSG00000137713.14 PPP2R1B chr11 111726908 111766427 - protein_coding KNOWN OTTHUMG00000166741.2 39520 6720 109 ENSG00000254990.4 RP11-108O10.2 chr11 111768668 111778350 - lincRNA NOVEL OTTHUMG00000166794.1 9683 885 8 ENSG00000086848.13 ALG9 chr11 111782195 111871581 - protein_coding KNOWN OTTHUMG00000166819.6 89387 8013 138 ENSG00000258529.4 RP11-108O10.8 chr11 111786286 111879425 - protein_coding NOVEL OTTHUMG00000171433.4 93140 3346 28 ENSG00000116584.16 ARHGEF2 chr1 155946851 156007070 - protein_coding KNOWN OTTHUMG00000017464.6 60220 9135 168 ENSG00000254450.1 ALG9-IT1 chr11 111817214 111829212 - sense_intronic NOVEL OTTHUMG00000166796.1 11999 684 2 ENSG00000254949.1 GNG5P3 chr11 111864254 111864460 + processed_pseudogene KNOWN OTTHUMG00000166883.1 207 207 1 ENSG00000255561.5 FDXACB1 chr11 111874056 111881243 - protein_coding KNOWN OTTHUMG00000166795.1 7188 3551 13 ENSG00000137720.6 C11orf1 chr11 111878935 111885975 + protein_coding KNOWN OTTHUMG00000166884.1 7041 3831 20 ENSG00000176343.5 RPL37AP8 chr11 111889199 111889474 - processed_pseudogene KNOWN OTTHUMG00000158458.1 276 276 1 ENSG00000109846.6 CRYAB chr11 111908565 111923722 - protein_coding KNOWN OTTHUMG00000166885.2 15158 3034 53 ENSG00000170276.5 HSPB2 chr11 111912242 111914093 + protein_coding KNOWN OTTHUMG00000166886.1 1852 1335 2 ENSG00000254445.1 HSPB2-C11orf52 chr11 111912736 111926871 + protein_coding KNOWN OTTHUMG00000166887.1 14136 2058 8 ENSG00000149300.8 C11orf52 chr11 111918032 111926872 + protein_coding KNOWN OTTHUMG00000166888.1 8841 1800 15 ENSG00000150764.12 DIXDC1 chr11 111927144 112022584 + protein_coding KNOWN OTTHUMG00000166912.3 95441 8509 83 ENSG00000277817.1 MIR6738 chr1 155951273 155951336 - miRNA KNOWN NA 64 64 1 ENSG00000238965.1 RNA5SP351 chr11 111928400 111928508 + rRNA KNOWN NA 109 109 1 ENSG00000255286.2 RP11-708L7.7 chr11 111945639 111946892 - processed_pseudogene KNOWN OTTHUMG00000166922.2 1254 353 2 ENSG00000255334.1 RP11-708L7.6 chr11 112015307 112016124 + sense_intronic NOVEL OTTHUMG00000166913.1 818 322 2 ENSG00000150768.14 DLAT chr11 112024814 112064390 + protein_coding KNOWN OTTHUMG00000133751.2 39577 4831 54 ENSG00000230911.1 PPIHP1 chr11 112029858 112030367 - processed_pseudogene KNOWN OTTHUMG00000133754.1 510 510 1 ENSG00000238444.1 RNU6-893P chr11 112032499 112032598 - snRNA KNOWN NA 100 100 1 ENSG00000271025.1 RP11-708L7.9 chr11 112036627 112036863 - processed_pseudogene KNOWN OTTHUMG00000184785.1 237 237 1 ENSG00000150773.9 PIH1D2 chr11 112064010 112074274 - protein_coding KNOWN OTTHUMG00000166925.3 10265 2474 40 ENSG00000150776.16 C11orf57 chr11 112074086 112085150 + protein_coding KNOWN OTTHUMG00000150213.4 11065 5755 51 ENSG00000150779.10 TIMM8B chr11 112084800 112086798 - protein_coding KNOWN OTTHUMG00000162261.2 1999 1166 10 ENSG00000273002.1 RP11-336K24.12 chr1 155978799 155982986 + antisense NOVEL OTTHUMG00000186425.1 4188 2157 2 ENSG00000204370.7 SDHD chr11 112086773 112120013 + protein_coding KNOWN OTTHUMG00000166997.2 33241 2509 35 ENSG00000255292.5 AP002884.2 chr11 112086903 112193805 + protein_coding KNOWN OTTHUMG00000186325.1 106903 1190 22 ENSG00000150782.10 IL18 chr11 112143251 112164117 - protein_coding KNOWN OTTHUMG00000167006.1 20867 2628 29 ENSG00000254638.1 RP11-356J5.4 chr11 112165197 112172606 - antisense NOVEL OTTHUMG00000167007.1 7410 594 4 ENSG00000150783.8 TEX12 chr11 112167372 112172559 + protein_coding KNOWN OTTHUMG00000167008.1 5188 1155 10 ENSG00000197580.10 BCO2 chr11 112175467 112224699 + protein_coding KNOWN OTTHUMG00000167155.3 49233 6789 127 ENSG00000214264.4 KCTD9P4 chr11 112180773 112183191 + processed_pseudogene KNOWN OTTHUMG00000167156.1 2419 1166 3 ENSG00000255231.1 MRPS36P4 chr11 112208601 112208898 + processed_pseudogene KNOWN OTTHUMG00000167157.2 298 298 1 ENSG00000243930.1 RPS12P21 chr11 112218326 112218720 + processed_pseudogene KNOWN OTTHUMG00000167158.1 395 395 1 ENSG00000150787.6 PTS chr11 112226365 112269955 + protein_coding KNOWN OTTHUMG00000167167.1 43591 3130 39 ENSG00000224276.1 RP11-336K24.5 chr1 155991390 156001787 + antisense NOVEL OTTHUMG00000017459.1 10398 401 2 ENSG00000243250.1 RPS6P16 chr11 112235371 112236025 - processed_pseudogene KNOWN OTTHUMG00000158460.1 655 655 1 ENSG00000215954.2 AP002884.1 chr11 112247844 112247932 + miRNA NOVEL NA 89 89 1 ENSG00000188771.4 PLET1 chr11 112248479 112260860 - protein_coding KNOWN OTTHUMG00000167189.2 12382 1215 4 ENSG00000268472.2 RP11-356J5.13 chr11 112260265 112261396 + antisense NOVEL OTTHUMG00000187435.1 1132 1132 1 ENSG00000213234.4 ST13P10 chr11 112267290 112268371 - processed_pseudogene KNOWN OTTHUMG00000167190.1 1082 1082 1 ENSG00000250303.3 RP11-356J5.12 chr11 112270749 112362534 + lincRNA NOVEL OTTHUMG00000167191.2 91786 5018 12 ENSG00000206772.1 RNU6-44P chr11 112352556 112352662 - snRNA KNOWN NA 107 107 1 ENSG00000254968.5 RP11-65M17.3 chr11 112393118 112621729 + lincRNA NOVEL OTTHUMG00000167195.1 228612 1583 10 ENSG00000213233.5 RPL23AP62 chr11 112461468 112461920 - processed_pseudogene KNOWN OTTHUMG00000158461.2 453 453 1 ENSG00000255484.2 RP11-65M17.1 chr11 112534220 112555802 - lincRNA NOVEL OTTHUMG00000167193.2 21583 2067 4 ENSG00000163479.12 SSR2 chr1 156009048 156020959 - protein_coding KNOWN OTTHUMG00000017456.3 11912 6651 87 ENSG00000212397.1 snosnR66 chr11 112602354 112602452 - snoRNA NOVEL NA 99 99 1 ENSG00000254626.1 RP11-27G22.1 chr11 112787304 112795854 + lincRNA NOVEL OTTHUMG00000167194.1 8551 832 2 ENSG00000247416.2 RP11-629G13.1 chr11 112959279 112963460 - antisense NOVEL OTTHUMG00000167662.1 4182 1975 5 ENSG00000149294.15 NCAM1 chr11 112961247 113278436 + protein_coding KNOWN OTTHUMG00000167196.7 317190 12737 312 ENSG00000238998.1 RNU7-187P chr11 112977353 112977420 + snRNA KNOWN NA 68 68 1 ENSG00000227487.3 NCAM1-AS1 chr11 113269532 113273901 - antisense NOVEL OTTHUMG00000167663.1 4370 1198 5 ENSG00000255129.4 RP11-839D17.3 chr11 113278437 113314437 - antisense NOVEL OTTHUMG00000167679.1 36001 958 11 ENSG00000149292.15 TTC12 chr11 113314529 113383544 + protein_coding KNOWN OTTHUMG00000142832.6 69016 5302 224 ENSG00000270179.1 RP11-159N11.4 chr11 113368478 113369117 + sense_intronic NOVEL OTTHUMG00000184126.1 640 640 1 ENSG00000170209.4 ANKK1 chr11 113387791 113400418 + protein_coding KNOWN OTTHUMG00000167715.1 12628 2598 13 ENSG00000160803.7 UBQLN4 chr1 156035301 156053794 - protein_coding KNOWN OTTHUMG00000017461.2 18494 3878 18 ENSG00000256757.1 RP11-159N11.3 chr11 113405321 113412117 + antisense NOVEL OTTHUMG00000167716.1 6797 524 4 ENSG00000149295.12 DRD2 chr11 113409615 113475691 - protein_coding KNOWN OTTHUMG00000167717.1 66077 4098 57 ENSG00000265140.1 MIR4301 chr11 113450023 113450088 - miRNA KNOWN NA 66 66 1 ENSG00000166682.9 TMPRSS5 chr11 113687550 113706373 - protein_coding KNOWN OTTHUMG00000168186.1 18824 2662 103 ENSG00000256091.1 MTRF1LP1 chr11 113711720 113712398 + processed_pseudogene KNOWN OTTHUMG00000168189.1 679 679 1 ENSG00000086827.7 ZW10 chr11 113733187 113773811 - protein_coding KNOWN OTTHUMG00000168190.1 40625 2992 38 ENSG00000243353.1 RP11-667M19.1 chr11 113751116 113751286 - processed_pseudogene KNOWN OTTHUMG00000158462.1 171 171 1 ENSG00000257070.1 RP11-667M19.4 chr11 113769660 113769994 + processed_pseudogene KNOWN OTTHUMG00000168191.1 335 335 1 ENSG00000256603.1 RP11-667M19.2 chr11 113770393 113771691 - antisense NOVEL OTTHUMG00000168192.1 1299 586 2 ENSG00000228607.2 CLDN25 chr11 113779747 113780500 + protein_coding KNOWN OTTHUMG00000168193.1 754 754 1 ENSG00000116586.10 LAMTOR2 chr1 156054752 156058510 + protein_coding KNOWN OTTHUMG00000017462.1 3759 1438 19 ENSG00000256167.1 ATF4P4 chr11 113789231 113791366 + transcribed_processed_pseudogene KNOWN OTTHUMG00000168194.1 2136 2136 2 ENSG00000255870.1 RP11-667M19.5 chr11 113789242 113790027 + processed_pseudogene KNOWN OTTHUMG00000168195.1 786 786 1 ENSG00000257101.1 LRRC37A13P chr11 113791466 113791752 + processed_pseudogene KNOWN OTTHUMG00000168196.1 287 287 1 ENSG00000048028.10 USP28 chr11 113797874 113875570 - protein_coding KNOWN OTTHUMG00000168205.2 77697 5719 158 ENSG00000256452.1 RP11-667M19.10 chr11 113818077 113822458 + antisense NOVEL OTTHUMG00000168206.1 4382 158 3 ENSG00000255710.2 RP11-667M19.9 chr11 113820856 113821885 - processed_pseudogene KNOWN OTTHUMG00000168207.2 1030 1030 1 ENSG00000201687.1 RNU6-1107P chr11 113859346 113859449 + snRNA KNOWN NA 104 104 1 ENSG00000149305.5 HTR3B chr11 113904677 113946565 + protein_coding KNOWN OTTHUMG00000168210.1 41889 2314 22 ENSG00000166736.10 HTR3A chr11 113974881 113990313 + protein_coding KNOWN OTTHUMG00000160494.2 15433 2772 56 ENSG00000109906.12 ZBTB16 chr11 114059593 114250676 + protein_coding KNOWN OTTHUMG00000168243.1 191084 6372 39 ENSG00000201746.1 RNU6-828P chr1 10163268 10163374 + snRNA KNOWN NA 107 107 1 ENSG00000132698.12 RAB25 chr1 156061160 156070514 + protein_coding KNOWN OTTHUMG00000017457.2 9355 1699 25 ENSG00000221112.1 AP000908.1 chr11 114086811 114086929 - miRNA NOVEL NA 119 119 1 ENSG00000256947.1 RP11-64D24.2 chr11 114210616 114356571 - antisense NOVEL OTTHUMG00000168244.1 145956 393 3 ENSG00000166741.6 NNMT chr11 114257787 114313285 + protein_coding KNOWN OTTHUMG00000168245.1 55499 2919 23 ENSG00000280653.1 AP002518.1 chr11 114312063 114312207 + miRNA NOVEL NA 145 145 1 ENSG00000256195.2 RP11-64D24.4 chr11 114360635 114380045 - antisense NOVEL OTTHUMG00000168246.2 19411 3837 3 ENSG00000180425.9 C11orf71 chr11 114391443 114400511 - protein_coding KNOWN OTTHUMG00000168247.2 9069 2203 3 ENSG00000076053.9 RBM7 chr11 114400030 114414203 + protein_coding KNOWN OTTHUMG00000168270.1 14174 7885 37 ENSG00000255663.1 RP11-212D19.4 chr11 114400682 114443932 + protein_coding NOVEL OTTHUMG00000168263.2 43251 729 7 ENSG00000076043.8 REXO2 chr11 114439386 114450279 + protein_coding KNOWN OTTHUMG00000168271.2 10894 3699 88 ENSG00000256533.1 RP11-212D19.5 chr11 114453064 114454123 + processed_pseudogene KNOWN OTTHUMG00000168272.1 1060 1060 1 ENSG00000254726.2 MEX3A chr1 156072013 156081998 - protein_coding KNOWN OTTHUMG00000017465.3 9986 6124 5 ENSG00000255982.1 NXPE2P1 chr11 114512706 114513431 - processed_pseudogene KNOWN OTTHUMG00000168290.1 726 726 1 ENSG00000270204.1 RP11-172C16.5 chr11 114517864 114518371 + processed_pseudogene KNOWN OTTHUMG00000184748.1 508 508 1 ENSG00000095110.6 NXPE1 chr11 114521715 114559895 - protein_coding KNOWN OTTHUMG00000168284.1 38181 4317 35 ENSG00000238724.1 snoU13 chr11 114527129 114527232 + snoRNA NOVEL NA 104 104 1 ENSG00000137634.8 NXPE4 chr11 114570591 114595762 - protein_coding KNOWN OTTHUMG00000168291.1 25172 2163 12 ENSG00000256674.1 RP11-172C16.4 chr11 114583253 114584692 + processed_pseudogene KNOWN OTTHUMG00000168292.1 1440 1440 1 ENSG00000204361.8 NXPE2 chr11 114678386 114706933 + protein_coding KNOWN OTTHUMG00000168293.4 28548 1873 6 ENSG00000252870.1 ACA59 chr11 115128218 115128373 - snoRNA NOVEL NA 156 156 1 ENSG00000182985.15 CADM1 chr11 115169218 115504957 - protein_coding KNOWN OTTHUMG00000168202.6 335740 11017 171 ENSG00000256972.1 AP000462.3 chr11 115333577 115340262 + lincRNA NOVEL OTTHUMG00000168234.1 6686 330 2 ENSG00000222611.1 AL355388.1 chr1 156077373 156077454 + miRNA NOVEL NA 82 82 1 ENSG00000255580.1 AP000462.2 chr11 115363629 115377931 + lincRNA NOVEL OTTHUMG00000168235.1 14303 818 2 ENSG00000256315.1 AP000462.1 chr11 115396756 115397658 + processed_transcript NOVEL OTTHUMG00000168236.1 903 903 6 ENSG00000256281.1 RP11-136I14.2 chr11 115532322 115532953 - lincRNA NOVEL OTTHUMG00000168237.1 632 294 2 ENSG00000257087.1 RP11-136I14.3 chr11 115538869 115539384 - processed_pseudogene KNOWN OTTHUMG00000168238.1 516 516 1 ENSG00000255903.2 RP11-136I14.4 chr11 115578049 115578243 + processed_pseudogene KNOWN OTTHUMG00000168239.2 195 195 1 ENSG00000255689.1 RP11-136I14.5 chr11 115582297 115600339 + lincRNA NOVEL OTTHUMG00000168240.1 18043 376 3 ENSG00000239153.1 snoU13 chr11 115627082 115627185 - snoRNA NOVEL NA 104 104 1 ENSG00000255599.1 AP000997.1 chr11 115628065 115629743 + lincRNA NOVEL OTTHUMG00000168211.1 1679 479 3 ENSG00000260254.1 AP000997.2 chr11 115638563 115646962 + lincRNA NOVEL OTTHUMG00000168212.2 8400 8400 1 ENSG00000279771.1 AP000997.3 chr11 115659168 115661417 + TEC KNOWN OTTHUMG00000168213.2 2250 2250 1 ENSG00000160789.18 LMNA chr1 156082573 156140089 + protein_coding KNOWN OTTHUMG00000013961.4 57517 6985 158 ENSG00000256717.1 AP000797.3 chr11 115659658 115843146 + lincRNA NOVEL OTTHUMG00000168214.1 183489 574 3 ENSG00000279818.1 CTC-774J1.1 chr11 115731942 115734742 - TEC KNOWN OTTHUMG00000168215.1 2801 2801 1 ENSG00000246100.3 LINC00900 chr11 115754248 115760627 - lincRNA NOVEL OTTHUMG00000168216.2 6380 4766 13 ENSG00000257067.4 AP000797.4 chr11 115932774 115942995 + lincRNA NOVEL OTTHUMG00000168217.1 10222 641 7 ENSG00000281717.1 AP000797.5 chr11 115938736 115938824 - miRNA NOVEL NA 89 89 1 ENSG00000244259.1 AP000797.1 chr11 115950196 115950801 - processed_pseudogene KNOWN OTTHUMG00000158463.1 606 606 1 ENSG00000239600.1 AP000797.2 chr11 115951105 115951491 - processed_pseudogene KNOWN OTTHUMG00000158464.1 387 387 1 ENSG00000236437.1 AP001891.1 chr11 116496899 116500630 - lincRNA NOVEL OTTHUMG00000045137.1 3732 921 2 ENSG00000278945.1 AP000770.2 chr11 116609995 116610094 - TEC KNOWN OTTHUMG00000173229.1 100 100 1 ENSG00000237937.4 AP000770.1 chr11 116639422 116658252 + lincRNA NOVEL OTTHUMG00000045138.1 18831 738 6 ENSG00000196189.11 SEMA4A chr1 156147366 156177752 + protein_coding KNOWN OTTHUMG00000014042.3 30387 6676 128 ENSG00000137656.10 BUD13 chr11 116748170 116772988 - protein_coding KNOWN OTTHUMG00000045136.5 24819 2196 24 ENSG00000226645.1 AP006216.10 chr11 116773389 116774205 + antisense NOVEL OTTHUMG00000150017.1 817 419 2 ENSG00000109917.9 ZPR1 chr11 116773799 116788050 - protein_coding KNOWN OTTHUMG00000046114.9 14252 7069 64 ENSG00000110243.10 APOA5 chr11 116789367 116792420 - protein_coding KNOWN OTTHUMG00000046116.3 3054 1938 11 ENSG00000236267.1 AP006216.5 chr11 116813204 116814003 - antisense NOVEL OTTHUMG00000046113.2 800 333 2 ENSG00000110244.6 APOA4 chr11 116820700 116823306 - protein_coding KNOWN OTTHUMG00000046110.3 2607 1473 3 ENSG00000110245.10 APOC3 chr11 116829706 116833072 + protein_coding KNOWN OTTHUMG00000046115.6 3367 866 18 ENSG00000118137.8 APOA1 chr11 116835751 116837950 - protein_coding KNOWN OTTHUMG00000046112.5 2200 1424 17 ENSG00000235910.1 APOA1-AS chr11 116836117 116855729 + antisense NOVEL OTTHUMG00000150649.1 19613 563 2 ENSG00000160584.14 SIK3 chr11 116843402 117098437 - protein_coding KNOWN OTTHUMG00000066628.11 255036 10920 155 ENSG00000252236.1 SNORA26 chr1 156192063 156192203 - snoRNA NOVEL NA 141 141 1 ENSG00000231865.1 SIK3-IT1 chr11 116886046 116890721 - sense_intronic NOVEL OTTHUMG00000066638.1 4676 2472 3 ENSG00000264344.1 AP000936.2 chr11 117015430 117015529 - miRNA NOVEL NA 100 100 1 ENSG00000200537.1 RNY4P6 chr11 117015897 117015992 + misc_RNA KNOWN NA 96 96 1 ENSG00000234268.1 AP000936.1 chr11 117035797 117036051 - processed_pseudogene KNOWN OTTHUMG00000045135.1 255 255 1 ENSG00000224077.1 AP000936.4 chr11 117098987 117108170 + antisense NOVEL OTTHUMG00000066694.1 9184 483 3 ENSG00000225236.1 AP000936.5 chr11 117117794 117119181 - processed_pseudogene KNOWN OTTHUMG00000066693.1 1388 681 3 ENSG00000254851.1 RP11-109L13.1 chr11 117135528 117138582 + unprocessed_pseudogene KNOWN OTTHUMG00000165639.3 3055 822 5 ENSG00000254678.1 RP11-109L13.5 chr11 117143891 117144191 - processed_pseudogene KNOWN OTTHUMG00000167083.1 301 301 1 ENSG00000168092.12 PAFAH1B2 chr11 117144267 117176894 + protein_coding KNOWN OTTHUMG00000167064.3 32628 7104 37 ENSG00000149577.14 SIDT2 chr11 117178733 117197445 + protein_coding KNOWN OTTHUMG00000167065.2 18713 9061 209 ENSG00000160785.12 SLC25A44 chr1 156193932 156212796 + protein_coding KNOWN OTTHUMG00000014816.2 18865 7293 15 ENSG00000149591.15 TAGLN chr11 117199321 117204782 + protein_coding KNOWN OTTHUMG00000167067.1 5462 3917 34 ENSG00000160613.11 PCSK7 chr11 117204337 117232525 - protein_coding KNOWN OTTHUMG00000165640.4 28189 22303 86 ENSG00000280143.1 AP000892.6 chr11 117204967 117210292 + TEC KNOWN OTTHUMG00000167068.1 5326 5326 1 ENSG00000167257.9 RNF214 chr11 117232625 117286445 + protein_coding KNOWN OTTHUMG00000167069.2 53821 4398 78 ENSG00000252992.1 SCARNA11 chr11 117263799 117263952 + scaRNA NOVEL NA 154 154 1 ENSG00000186318.15 BACE1 chr11 117285207 117316259 - protein_coding KNOWN OTTHUMG00000160636.10 31053 7190 82 ENSG00000278768.1 BACE1-AS chr11 117290874 117293571 + antisense KNOWN OTTHUMG00000188154.1 2698 1022 5 ENSG00000276505.1 CMB9-94B1.2 chr11 117297005 117297328 - sense_intronic NOVEL OTTHUMG00000188155.1 324 324 1 ENSG00000110274.13 CEP164 chr11 117314557 117413268 + protein_coding KNOWN OTTHUMG00000167070.3 98712 11851 140 ENSG00000250699.1 AP000892.4 chr11 117316362 117328038 - antisense NOVEL OTTHUMG00000160666.4 11677 488 3 ENSG00000260238.4 PMF1-BGLAP chr1 156212982 156243332 + protein_coding KNOWN OTTHUMG00000014817.5 30351 1007 25 ENSG00000271412.1 PRR13P3 chr11 117336256 117336631 - processed_pseudogene KNOWN OTTHUMG00000184783.1 376 376 1 ENSG00000177103.12 DSCAML1 chr11 117427773 117817525 - protein_coding KNOWN OTTHUMG00000167071.2 389753 7035 67 ENSG00000279586.1 AP000711.1 chr11 117611101 117612017 - TEC KNOWN OTTHUMG00000167080.1 917 917 1 ENSG00000270403.1 RP11-35P15.1 chr11 117668483 117668858 + lincRNA NOVEL OTTHUMG00000185192.1 376 376 1 ENSG00000137731.12 FXYD2 chr11 117800844 117828698 - protein_coding KNOWN OTTHUMG00000166990.2 27855 5595 40 ENSG00000254844.4 RP11-728F11.3 chr11 117818443 117821992 + antisense NOVEL OTTHUMG00000166521.2 3550 557 3 ENSG00000137726.14 FXYD6 chr11 117820075 117877486 - protein_coding KNOWN OTTHUMG00000166991.3 57412 5617 132 ENSG00000255245.3 FXYD6-FXYD2 chr11 117820163 117876667 - protein_coding KNOWN OTTHUMG00000166496.3 56505 670 10 ENSG00000254528.6 RP11-728F11.4 chr11 117833719 117838942 + antisense NOVEL OTTHUMG00000166522.4 5224 1464 9 ENSG00000137747.13 TMPRSS13 chr11 117900643 117929459 - protein_coding KNOWN OTTHUMG00000166992.2 28817 5367 82 ENSG00000160783.18 PMF1 chr1 156212993 156240042 + protein_coding KNOWN OTTHUMG00000177123.3 27050 2520 31 ENSG00000110324.8 IL10RA chr11 117986348 118001483 + protein_coding KNOWN OTTHUMG00000166523.2 15136 6548 55 ENSG00000280008.1 RP11-652L8.4 chr11 118002348 118003037 + TEC KNOWN OTTHUMG00000184131.1 690 690 1 ENSG00000255274.7 TMPRSS4-AS1 chr11 118015772 118086793 - antisense NOVEL OTTHUMG00000166993.2 71022 453 11 ENSG00000279906.1 DKFZp313A047 chr11 118025369 118029863 - protein_coding KNOWN NA 4495 942 3 ENSG00000272075.2 Metazoa_SRP chr11 118067237 118067539 + misc_RNA NOVEL NA 303 303 1 ENSG00000137648.15 TMPRSS4 chr11 118077012 118121890 + protein_coding KNOWN OTTHUMG00000164122.2 44879 9948 169 ENSG00000177098.7 SCN4B chr11 118133377 118152888 - protein_coding KNOWN OTTHUMG00000166994.1 19512 5649 20 ENSG00000149575.5 SCN2B chr11 118161951 118176673 - protein_coding KNOWN OTTHUMG00000048248.2 14723 5826 4 ENSG00000160593.16 AMICA1 chr11 118193740 118225094 - protein_coding KNOWN OTTHUMG00000166965.3 31355 8587 84 ENSG00000255163.1 HSPE1P18 chr11 118208932 118209211 - processed_pseudogene KNOWN OTTHUMG00000166995.1 280 280 1 ENSG00000242252.1 BGLAP chr1 156241962 156243321 + protein_coding KNOWN OTTHUMG00000014819.2 1360 1190 6 ENSG00000160588.8 MPZL3 chr11 118226690 118252350 - protein_coding KNOWN OTTHUMG00000166966.2 25661 3968 20 ENSG00000149573.7 MPZL2 chr11 118253403 118264536 - protein_coding KNOWN OTTHUMG00000166967.3 11134 4753 27 ENSG00000280032.1 RP11-832A4.7 chr11 118264593 118266817 + TEC KNOWN OTTHUMG00000173216.1 2225 2225 1 ENSG00000198851.8 CD3E chr11 118304545 118316175 + protein_coding KNOWN OTTHUMG00000166968.1 11631 2844 39 ENSG00000254992.1 RP11-215H18.5 chr11 118322789 118323083 - processed_pseudogene KNOWN OTTHUMG00000166969.1 295 295 1 ENSG00000167286.8 CD3D chr11 118338954 118342744 - protein_coding KNOWN OTTHUMG00000166970.1 3791 929 20 ENSG00000160654.8 CD3G chr11 118344344 118355161 + protein_coding KNOWN OTTHUMG00000166971.1 10818 3836 38 ENSG00000110344.8 UBE4A chr11 118359585 118399211 + protein_coding KNOWN OTTHUMG00000168100.1 39627 6576 51 ENSG00000254873.1 RP11-770J1.5 chr11 118397095 118401895 - antisense NOVEL OTTHUMG00000166405.1 4801 2395 4 ENSG00000167283.6 ATP5L chr11 118401154 118431496 + protein_coding KNOWN OTTHUMG00000166336.3 30343 3382 25 ENSG00000054523.15 KIF1B chr1 10210805 10381603 + protein_coding KNOWN OTTHUMG00000001817.1 170799 17693 301 ENSG00000160781.14 PAQR6 chr1 156243321 156248117 - protein_coding KNOWN OTTHUMG00000017490.5 4797 2439 95 ENSG00000269944.1 RP11-770J1.7 chr11 118415977 118416521 + sense_intronic NOVEL OTTHUMG00000184103.1 545 545 1 ENSG00000255384.1 RP11-770J1.4 chr11 118433121 118435206 - lincRNA NOVEL OTTHUMG00000166406.1 2086 2086 1 ENSG00000118058.19 KMT2A chr11 118436490 118526832 + protein_coding KNOWN OTTHUMG00000166337.6 90343 21961 120 ENSG00000255435.5 RP11-770J1.3 chr11 118511911 118531094 - antisense NOVEL OTTHUMG00000166407.2 19184 1054 16 ENSG00000172425.9 TTC36 chr11 118527472 118531197 + protein_coding KNOWN OTTHUMG00000166338.2 3726 1009 11 ENSG00000149582.14 TMEM25 chr11 118531041 118547280 + protein_coding KNOWN OTTHUMG00000166339.2 16240 5529 153 ENSG00000118096.6 IFT46 chr11 118544528 118572970 - protein_coding KNOWN OTTHUMG00000166408.1 28443 3814 91 ENSG00000243431.1 RPL5P30 chr11 118560690 118561580 + processed_pseudogene KNOWN OTTHUMG00000158472.1 891 891 1 ENSG00000095139.12 ARCN1 chr11 118572390 118603033 + protein_coding KNOWN OTTHUMG00000166340.2 30644 4177 38 ENSG00000207185.1 RNU6-1157P chr11 118593988 118594093 + snRNA KNOWN NA 106 106 1 ENSG00000198952.8 SMG5 chr1 156249224 156282825 - protein_coding KNOWN OTTHUMG00000017491.4 33602 5304 31 ENSG00000019144.15 PHLDB1 chr11 118606440 118658038 + protein_coding KNOWN OTTHUMG00000166341.6 51599 21722 269 ENSG00000255176.1 AP002954.3 chr11 118636620 118638097 + antisense NOVEL OTTHUMG00000166342.1 1478 1388 2 ENSG00000275466.1 MIR6716 chr11 118644000 118644079 + miRNA KNOWN NA 80 80 1 ENSG00000118094.10 TREH chr11 118657316 118679690 - protein_coding KNOWN OTTHUMG00000166409.3 22375 3182 55 ENSG00000255239.1 AP002954.6 chr11 118688039 118690600 - unprocessed_pseudogene KNOWN OTTHUMG00000166410.1 2562 465 4 ENSG00000207462.1 RNU6-376P chr11 118702342 118702447 + snRNA KNOWN NA 106 106 1 ENSG00000255422.1 AP002954.4 chr11 118704607 118750263 + antisense NOVEL OTTHUMG00000166343.1 45657 425 3 ENSG00000110367.10 DDX6 chr11 118747766 118791149 - protein_coding KNOWN OTTHUMG00000166411.4 43384 11444 61 ENSG00000278376.1 RP11-158I9.8 chr11 118791254 118793137 + lincRNA NOVEL OTTHUMG00000188156.1 1884 1884 1 ENSG00000254478.1 RP11-158I9.1 chr11 118821895 118822084 + processed_pseudogene KNOWN OTTHUMG00000166344.1 190 190 1 ENSG00000163472.17 TMEM79 chr1 156282935 156293185 + protein_coding KNOWN OTTHUMG00000019788.1 10251 3067 27 ENSG00000254621.1 SETP16 chr11 118833846 118834556 - processed_pseudogene KNOWN OTTHUMG00000166412.1 711 711 1 ENSG00000201535.2 Y_RNA chr11 118836010 118836111 + misc_RNA NOVEL NA 102 102 1 ENSG00000160683.4 CXCR5 chr11 118883766 118897799 + protein_coding KNOWN OTTHUMG00000166345.1 14034 4431 2 ENSG00000245869.2 RP11-158I9.5 chr11 118885841 118887742 - antisense NOVEL OTTHUMG00000166413.1 1902 1646 2 ENSG00000186174.11 BCL9L chr11 118893875 118925608 - protein_coding KNOWN OTTHUMG00000166414.6 31734 10470 27 ENSG00000264211.1 MIR4492 chr11 118910708 118910787 + miRNA KNOWN NA 80 80 1 ENSG00000110375.2 UPK2 chr11 118925164 118958559 + protein_coding KNOWN OTTHUMG00000166346.1 33396 1106 11 ENSG00000239726.3 RN7SL688P chr11 118931216 118931490 + misc_RNA KNOWN NA 275 275 1 ENSG00000222529.1 Y_RNA chr11 118970498 118970595 + misc_RNA NOVEL NA 98 98 1 ENSG00000176302.11 FOXR1 chr11 118971707 118981291 + protein_coding KNOWN OTTHUMG00000166347.1 9585 1237 16 ENSG00000198715.10 GLMP chr1 156290089 156295689 - protein_coding KNOWN OTTHUMG00000019789.5 5601 3471 56 ENSG00000280502.1 Metazoa_SRP chr11 118994334 118994630 + misc_RNA NOVEL NA 297 297 1 ENSG00000255121.2 RP11-110I1.12 chr11 118994824 118998004 - lincRNA KNOWN OTTHUMG00000166415.2 3181 1506 4 ENSG00000186166.7 CCDC84 chr11 118998142 119015791 + protein_coding KNOWN OTTHUMG00000166348.3 17650 5105 63 ENSG00000240970.1 RPL23AP64 chr11 119003012 119003446 - processed_pseudogene KNOWN OTTHUMG00000158473.1 435 435 1 ENSG00000254428.1 RP11-110I1.11 chr11 119003742 119004893 - antisense KNOWN OTTHUMG00000166416.1 1152 523 2 ENSG00000254909.1 RP11-110I1.5 chr11 119005727 119005934 - processed_pseudogene KNOWN OTTHUMG00000166349.1 208 208 1 ENSG00000118181.9 RPS25 chr11 119015712 119018691 - protein_coding KNOWN OTTHUMG00000166350.1 2980 1477 22 ENSG00000196655.8 TRAPPC4 chr11 119018432 119025454 + protein_coding KNOWN OTTHUMG00000166351.1 7023 5140 53 ENSG00000266398.1 MIR3656 chr11 119018944 119019012 + miRNA KNOWN NA 69 69 1 ENSG00000137700.15 SLC37A4 chr11 119024114 119030906 - protein_coding KNOWN OTTHUMG00000166352.3 6793 6186 125 ENSG00000189030.9 VHLL chr1 156298624 156299299 - protein_coding KNOWN OTTHUMG00000024058.3 676 676 1 ENSG00000255114.1 RP11-110I1.6 chr11 119044188 119045493 + antisense KNOWN OTTHUMG00000166353.1 1306 667 2 ENSG00000149428.17 HYOU1 chr11 119044189 119057202 - protein_coding KNOWN OTTHUMG00000166354.8 13014 7694 226 ENSG00000271751.1 RP11-110I1.14 chr11 119065263 119065677 - lincRNA KNOWN OTTHUMG00000185714.1 415 415 1 ENSG00000272186.1 RP11-110I1.13 chr11 119067374 119067698 - antisense KNOWN OTTHUMG00000185715.1 325 325 1 ENSG00000160695.13 VPS11 chr11 119067692 119081978 + protein_coding KNOWN OTTHUMG00000166355.6 14287 5907 73 ENSG00000256269.5 HMBS chr11 119084866 119093549 + protein_coding KNOWN OTTHUMG00000168295.3 8684 4247 235 ENSG00000188486.3 H2AFX chr11 119093854 119095467 - protein_coding KNOWN OTTHUMG00000166196.4 1614 1614 3 ENSG00000281272.1 AP003391.1 chr11 119095051 119095191 + miRNA NOVEL NA 141 141 1 ENSG00000172269.15 DPAGT1 chr11 119096503 119108331 - protein_coding KNOWN OTTHUMG00000153533.2 11829 5280 72 ENSG00000172375.11 C2CD2L chr11 119102198 119118544 + protein_coding KNOWN OTTHUMG00000166167.3 16347 9216 52 ENSG00000163468.13 CCT3 chr1 156308968 156367873 - protein_coding KNOWN OTTHUMG00000024061.6 58906 4018 134 ENSG00000172273.11 HINFP chr11 119121587 119136044 + protein_coding KNOWN OTTHUMG00000166168.3 14458 9836 65 ENSG00000172350.8 ABCG4 chr11 119149012 119162653 + protein_coding KNOWN OTTHUMG00000166169.5 13642 6271 61 ENSG00000160703.14 NLRX1 chr11 119166568 119184016 + protein_coding KNOWN OTTHUMG00000154476.4 17449 5320 87 ENSG00000172367.14 PDZD3 chr11 119185457 119190223 + protein_coding KNOWN OTTHUMG00000166224.1 4767 3827 96 ENSG00000248712.6 CCDC153 chr11 119189638 119196769 - protein_coding KNOWN OTTHUMG00000156903.3 7132 2556 23 ENSG00000110395.4 CBL chr11 119206042 119308149 + protein_coding KNOWN OTTHUMG00000166170.4 102108 11465 16 ENSG00000222249.1 RNU6-262P chr11 119289562 119289677 - snRNA KNOWN NA 116 116 1 ENSG00000076706.13 MCAM chr11 119308529 119321521 - protein_coding KNOWN OTTHUMG00000166197.6 12993 7422 105 ENSG00000277325.1 MIR6756 chr11 119312950 119313012 - miRNA KNOWN NA 63 63 1 ENSG00000252119.1 ACA64 chr11 119323293 119323409 - snoRNA NOVEL NA 117 117 1 ENSG00000163467.10 TSACC chr1 156337314 156346995 + protein_coding KNOWN OTTHUMG00000024060.2 9682 1115 32 ENSG00000173456.4 RNF26 chr11 119334527 119337313 + protein_coding KNOWN OTTHUMG00000166171.1 2787 2787 1 ENSG00000245385.2 RP11-334E6.10 chr11 119336249 119337309 - antisense NOVEL OTTHUMG00000166225.1 1061 507 2 ENSG00000259159.4 MFRP chr11 119338934 119346673 - protein_coding NOVEL OTTHUMG00000171803.1 7740 3925 30 ENSG00000223953.4 C1QTNF5 chr11 119338942 119340883 - protein_coding KNOWN OTTHUMG00000166198.1 1942 1353 5 ENSG00000235718.6 MFRP chr11 119341168 119346673 - protein_coding KNOWN OTTHUMG00000166199.2 5506 2392 31 ENSG00000036672.14 USP2 chr11 119355215 119381726 - protein_coding KNOWN OTTHUMG00000166200.2 26512 4538 53 ENSG00000254740.2 RP11-334E6.3 chr11 119372706 119381613 + antisense NOVEL OTTHUMG00000166172.2 8908 894 4 ENSG00000245248.6 USP2-AS1 chr11 119381778 119526664 + antisense NOVEL OTTHUMG00000166173.3 144887 4762 24 ENSG00000254590.1 RP11-334E6.2 chr11 119402792 119404088 + processed_pseudogene KNOWN OTTHUMG00000166174.1 1297 1297 1 ENSG00000254892.1 RP11-334E6.4 chr11 119403963 119404227 - processed_pseudogene KNOWN OTTHUMG00000166201.1 265 265 1 ENSG00000132677.11 RHBG chr1 156369212 156385219 + protein_coding KNOWN OTTHUMG00000024057.9 16008 3383 69 ENSG00000154096.12 THY1 chr11 119417378 119424985 - protein_coding KNOWN OTTHUMG00000166202.4 7608 5925 34 ENSG00000263873.1 RP11-334E6.12 chr11 119417951 119419114 + sense_intronic NOVEL OTTHUMG00000179599.1 1164 632 2 ENSG00000255377.1 DUXAP5 chr11 119444991 119445519 - processed_pseudogene KNOWN OTTHUMG00000166203.1 529 529 1 ENSG00000230716.3 KRT8P7 chr11 119602875 119604306 - processed_pseudogene KNOWN OTTHUMG00000166175.1 1432 1432 1 ENSG00000254561.3 RP11-196E1.3 chr11 119608423 119659284 + antisense NOVEL OTTHUMG00000166176.2 50862 4476 7 ENSG00000110400.9 PVRL1 chr11 119623408 119729084 - protein_coding KNOWN OTTHUMG00000166177.2 105677 7701 31 ENSG00000199217.1 RNU6-1123P chr11 119656311 119656416 + snRNA KNOWN NA 106 106 1 ENSG00000255247.1 CTD-2523D13.1 chr11 119709920 119713925 + lincRNA NOVEL OTTHUMG00000166178.1 4006 559 3 ENSG00000254854.1 CTD-2523D13.2 chr11 119729583 119739623 + antisense NOVEL OTTHUMG00000166179.1 10041 523 4 ENSG00000254406.1 RP11-215D10.1 chr11 119821304 119822129 - processed_pseudogene KNOWN OTTHUMG00000166135.1 826 826 1 ENSG00000237390.1 RP11-139I14.2 chr1 156388226 156395609 + lincRNA NOVEL OTTHUMG00000031021.1 7384 5586 2 ENSG00000276827.1 AP001994.1 chr11 119821829 119821927 - miRNA NOVEL NA 99 99 1 ENSG00000254863.1 RP11-831A10.2 chr11 119987954 119995037 - lincRNA NOVEL OTTHUMG00000166136.1 7084 1250 8 ENSG00000255216.1 RP11-831A10.1 chr11 120008604 120012158 - lincRNA NOVEL OTTHUMG00000166137.1 3555 562 2 ENSG00000137699.15 TRIM29 chr11 120111275 120185529 - protein_coding KNOWN OTTHUMG00000140377.5 74255 10218 95 ENSG00000176984.5 AP000679.2 chr11 120168977 120171679 + antisense NOVEL OTTHUMG00000166138.3 2703 2081 4 ENSG00000184232.7 OAF chr11 120210767 120230332 + protein_coding KNOWN OTTHUMG00000166139.2 19566 3176 10 ENSG00000137709.8 POU2F3 chr11 120236640 120319944 + protein_coding KNOWN OTTHUMG00000166140.4 83305 6645 53 ENSG00000259541.4 RP11-778O17.4 chr11 120249759 120265932 - antisense NOVEL OTTHUMG00000171955.1 16174 2600 11 ENSG00000181264.7 TMEM136 chr11 120325129 120333682 + protein_coding KNOWN OTTHUMG00000166142.1 8554 4468 14 ENSG00000196914.7 ARHGEF12 chr11 120336914 120489936 + protein_coding KNOWN OTTHUMG00000166143.3 153023 24404 199 ENSG00000125462.15 C1orf61 chr1 156404250 156430701 - protein_coding KNOWN OTTHUMG00000031022.3 26452 12314 102 ENSG00000274303.1 7SK chr11 120365666 120365963 + misc_RNA NOVEL NA 298 298 1 ENSG00000149403.10 GRIK4 chr11 120511759 120988904 + protein_coding KNOWN OTTHUMG00000048255.7 477146 7459 73 ENSG00000255006.1 TCEB1P22 chr11 120619934 120620267 - processed_pseudogene KNOWN OTTHUMG00000166091.1 334 334 1 ENSG00000250493.2 RP11-640N11.2 chr11 120867933 120894797 - antisense NOVEL OTTHUMG00000166092.1 26865 6314 2 ENSG00000254735.1 HMGB1P42 chr11 120936102 120936654 - processed_pseudogene KNOWN OTTHUMG00000166093.1 553 553 1 ENSG00000281726.1 GRIK4_3p_UTR chr11 120986258 120986353 + misc_RNA NOVEL NA 96 96 1 ENSG00000154114.11 TBCEL chr11 121024072 121090775 + protein_coding KNOWN OTTHUMG00000166061.3 66704 7020 63 ENSG00000281492.1 AP000646.1 chr11 121055207 121055275 - miRNA NOVEL NA 69 69 1 ENSG00000109927.8 TECTA chr11 121101173 121191493 + protein_coding KNOWN OTTHUMG00000149908.1 90321 7696 49 ENSG00000254515.1 RP11-775A1.2 chr11 121238304 121238688 + processed_pseudogene KNOWN OTTHUMG00000166067.1 385 385 1 ENSG00000264881.1 MIR1273D chr1 10227718 10227803 + miRNA KNOWN NA 86 86 1 ENSG00000207933.2 MIR9-1 chr1 156420331 156420438 + miRNA KNOWN NA 108 108 1 ENSG00000244400.2 RPS4XP12 chr11 121250270 121250978 - processed_pseudogene KNOWN OTTHUMG00000158474.2 709 709 1 ENSG00000109929.8 SC5D chr11 121292453 121308694 + protein_coding KNOWN OTTHUMG00000166068.1 16242 5566 35 ENSG00000232460.4 BMPR1APS2 chr11 121361854 121362865 - processed_pseudogene KNOWN OTTHUMG00000166069.1 1012 1012 1 ENSG00000271022.1 RP11-142I2.1 chr11 121426645 121427416 - processed_pseudogene KNOWN OTTHUMG00000184782.1 772 772 1 ENSG00000246790.2 RP11-730K11.1 chr11 121447331 121453013 - antisense NOVEL OTTHUMG00000166056.1 5683 2908 4 ENSG00000137642.11 SORL1 chr11 121452203 121633693 + protein_coding KNOWN OTTHUMG00000166057.3 181491 19449 185 ENSG00000252556.1 RNU6-256P chr11 122004355 122004451 + snRNA KNOWN NA 97 97 1 ENSG00000255248.5 RP11-166D19.1 chr11 122028355 122116323 - sense_overlapping NOVEL OTTHUMG00000166058.2 87969 7117 32 ENSG00000207971.1 MIR125B1 chr11 122099757 122099844 - miRNA KNOWN NA 88 88 1 ENSG00000259571.1 BLID chr11 122115354 122116215 - protein_coding KNOWN OTTHUMG00000166060.1 862 862 1 ENSG00000236947.4 RP11-98G7.1 chr1 156446412 156456577 - lincRNA NOVEL OTTHUMG00000033094.1 10166 990 7 ENSG00000198975.1 MIRLET7A2 chr11 122146521 122146593 - miRNA KNOWN NA 73 73 1 ENSG00000207994.1 MIR100 chr11 122152229 122152308 - miRNA KNOWN NA 80 80 1 ENSG00000255090.4 MIR100HG chr11 122155422 122422871 - lincRNA KNOWN OTTHUMG00000166035.3 267450 2066 23 ENSG00000255015.1 RP11-716H6.1 chr11 122294938 122301763 - lincRNA NOVEL OTTHUMG00000166037.1 6826 507 2 ENSG00000255219.1 RP11-716H6.2 chr11 122295190 122308019 + antisense NOVEL OTTHUMG00000166038.1 12830 571 3 ENSG00000252776.1 RNU4ATAC10P chr11 122449210 122449331 + snRNA KNOWN NA 122 122 1 ENSG00000253035.1 RNU4ATAC5P chr11 122451474 122451599 + snRNA KNOWN NA 126 126 1 ENSG00000223265.1 RNU6-592P chr11 122579205 122579307 - snRNA KNOWN NA 103 103 1 ENSG00000254572.2 GLULP3 chr11 122613444 122614486 - processed_pseudogene KNOWN OTTHUMG00000166039.2 1043 1043 1 ENSG00000254935.1 RP11-266E8.2 chr11 122618851 122619274 + processed_pseudogene KNOWN OTTHUMG00000166040.1 424 424 1 ENSG00000116604.16 MEF2D chr1 156463727 156500828 - protein_coding KNOWN OTTHUMG00000033095.6 37102 6400 58 ENSG00000154127.8 UBASH3B chr11 122655675 122814473 + protein_coding KNOWN OTTHUMG00000166025.1 158799 9011 38 ENSG00000239079.1 snoU13 chr11 122726208 122726311 - snoRNA NOVEL NA 104 104 1 ENSG00000109943.7 CRTAM chr11 122838500 122872639 + protein_coding KNOWN OTTHUMG00000166026.1 34140 2675 19 ENSG00000109944.9 C11orf63 chr11 122882528 122959798 + protein_coding KNOWN OTTHUMG00000166027.2 77271 4680 23 ENSG00000199709.1 RNU4-23P chr11 122927034 122927173 + snRNA KNOWN NA 140 140 1 ENSG00000254944.1 ATP5F1P5 chr11 122960327 122961086 + processed_pseudogene KNOWN OTTHUMG00000166028.1 760 760 1 ENSG00000188909.4 BSX chr11 122977570 122981720 - protein_coding KNOWN OTTHUMG00000150247.1 4151 830 3 ENSG00000213184.3 RP11-335F8.2 chr11 123017638 123018661 + processed_pseudogene KNOWN OTTHUMG00000166029.1 1024 1024 1 ENSG00000243669.2 RPL34P23 chr11 123035867 123036224 + processed_pseudogene KNOWN OTTHUMG00000158475.2 358 358 1 ENSG00000244641.2 RPS26P43 chr11 123049787 123050353 - processed_pseudogene KNOWN OTTHUMG00000158478.2 567 299 2 ENSG00000206651.1 Y_RNA chr1 156484098 156484210 - misc_RNA NOVEL NA 113 113 1 ENSG00000233541.4 RPL31P47 chr11 123051161 123051401 + processed_pseudogene KNOWN OTTHUMG00000158479.2 241 241 1 ENSG00000109971.12 HSPA8 chr11 123057489 123063230 - protein_coding KNOWN OTTHUMG00000166030.1 5742 4849 121 ENSG00000200879.1 SNORD14E chr11 123058077 123058161 - snoRNA KNOWN NA 85 85 1 ENSG00000207118.1 SNORD14D chr11 123058909 123058995 - snoRNA KNOWN NA 87 87 1 ENSG00000202252.1 SNORD14C chr11 123059335 123059422 - snoRNA KNOWN NA 88 88 1 ENSG00000166250.10 CLMP chr11 123069865 123195281 - protein_coding KNOWN OTTHUMG00000166031.2 125417 5097 20 ENSG00000255342.1 RP11-762B21.5 chr11 123135923 123136376 - processed_pseudogene KNOWN OTTHUMG00000166032.1 454 454 1 ENSG00000254710.1 CTD-2216M2.1 chr11 123188802 123228277 + antisense NOVEL OTTHUMG00000166033.1 39476 701 5 ENSG00000200496.1 U8 chr11 123301390 123301523 + snoRNA NOVEL NA 134 134 1 ENSG00000254823.1 RP11-109E10.1 chr11 123313674 123314770 - lincRNA NOVEL OTTHUMG00000166000.1 1097 477 5 ENSG00000260460.1 RP11-284F21.8 chr1 156509854 156511681 + lincRNA NOVEL OTTHUMG00000176105.1 1828 1828 1 ENSG00000254407.1 RP11-109E10.2 chr11 123340174 123340714 - processed_pseudogene KNOWN OTTHUMG00000166001.1 541 541 1 ENSG00000265357.1 MIR4493 chr11 123381440 123381512 - miRNA KNOWN NA 73 73 1 ENSG00000254667.2 AP000783.1 chr11 123430737 123435710 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000166002.3 4974 707 3 ENSG00000255414.1 LINC01059 chr11 123454398 123460410 + lincRNA NOVEL OTTHUMG00000166003.1 6013 2471 2 ENSG00000023171.13 GRAMD1B chr11 123525636 123627774 + protein_coding KNOWN OTTHUMG00000166004.2 102139 9770 125 ENSG00000254449.1 SF3A3P2 chr11 123597946 123599452 - processed_pseudogene KNOWN OTTHUMG00000166005.1 1507 1507 1 ENSG00000166257.7 SCN3B chr11 123629187 123655244 - protein_coding KNOWN OTTHUMG00000166006.1 26058 9464 30 ENSG00000254467.1 RP11-634B22.4 chr11 123668499 123671637 + lincRNA NOVEL OTTHUMG00000166007.1 3139 666 2 ENSG00000266814.1 AP000868.1 chr11 123708673 123708770 - miRNA NOVEL NA 98 98 1 ENSG00000166261.9 ZNF202 chr11 123724177 123741675 - protein_coding KNOWN OTTHUMG00000166008.1 17499 4808 48 ENSG00000183856.9 IQGAP3 chr1 156525405 156572604 - protein_coding KNOWN OTTHUMG00000033114.3 47200 6742 80 ENSG00000221931.2 OR6X1 chr11 123753488 123754545 - protein_coding KNOWN OTTHUMG00000166011.1 1058 1058 1 ENSG00000200197.1 RNU1-21P chr11 123763927 123764089 + snRNA KNOWN NA 163 163 1 ENSG00000196099.4 OR6M1 chr11 123805335 123806387 - protein_coding KNOWN OTTHUMG00000166012.1 1053 1053 1 ENSG00000254613.1 OR6M2P chr11 123841006 123841876 - unprocessed_pseudogene KNOWN OTTHUMG00000166013.1 871 871 1 ENSG00000254430.1 OR6M3P chr11 123861822 123862521 - unprocessed_pseudogene KNOWN OTTHUMG00000166014.1 700 700 1 ENSG00000204300.5 TMEM225 chr11 123882926 123885642 - protein_coding KNOWN OTTHUMG00000165959.2 2717 1107 8 ENSG00000181518.3 OR8D4 chr11 123906146 123907476 + protein_coding KNOWN OTTHUMG00000165960.1 1331 1331 1 ENSG00000171014.2 OR4D5 chr11 123939543 123940637 + protein_coding KNOWN OTTHUMG00000165961.1 1095 1095 1 ENSG00000181499.2 OR6T1 chr11 123942785 123943873 - protein_coding KNOWN OTTHUMG00000165962.1 1089 1089 1 ENSG00000196248.4 OR10S1 chr11 123976661 123977781 - protein_coding KNOWN OTTHUMG00000165963.2 1121 1121 1 ENSG00000187862.10 TTC24 chr1 156579727 156586770 + protein_coding KNOWN OTTHUMG00000033202.4 7044 2829 37 ENSG00000198674.3 OR10G6 chr11 123994163 123995161 - protein_coding KNOWN OTTHUMG00000165964.2 999 999 1 ENSG00000226461.3 OR10G5P chr11 124009655 124010012 + unprocessed_pseudogene KNOWN OTTHUMG00000165965.1 358 358 1 ENSG00000254737.1 OR10G4 chr11 124015575 124016510 + protein_coding KNOWN OTTHUMG00000165966.1 936 936 1 ENSG00000236981.1 OR10G9 chr11 124023013 124023948 + protein_coding KNOWN OTTHUMG00000165967.1 936 936 1 ENSG00000234560.3 OR10G8 chr11 124029590 124030634 + protein_coding KNOWN OTTHUMG00000165968.1 1045 1045 1 ENSG00000182634.7 OR10G7 chr11 124038066 124039010 - protein_coding KNOWN OTTHUMG00000165969.1 945 945 1 ENSG00000213182.3 OR10D5P chr11 124054870 124055707 + unprocessed_pseudogene KNOWN OTTHUMG00000154389.2 838 838 1 ENSG00000186268.3 OR10D4P chr11 124093582 124094532 - unprocessed_pseudogene KNOWN OTTHUMG00000165970.1 951 951 1 ENSG00000213181.2 OR10N1P chr11 124105100 124105968 - unprocessed_pseudogene KNOWN OTTHUMG00000154290.1 869 869 1 ENSG00000110002.14 VWA5A chr11 124115362 124147721 + protein_coding KNOWN OTTHUMG00000165971.2 32360 6403 70 ENSG00000265960.1 AL365181.1 chr1 156587856 156587955 - miRNA NOVEL NA 100 100 1 ENSG00000196403.4 OR10D1P chr11 124158421 124159356 + unprocessed_pseudogene KNOWN OTTHUMG00000154292.1 936 936 1 ENSG00000197309.2 OR10D3 chr11 124185216 124186245 + protein_coding KNOWN OTTHUMG00000165166.2 1030 1030 1 ENSG00000239426.4 OR8F1P chr11 124207183 124208112 + unprocessed_pseudogene KNOWN OTTHUMG00000154391.1 930 930 1 ENSG00000255425.4 OR8G3P chr11 124214767 124215687 + unprocessed_pseudogene KNOWN OTTHUMG00000165972.2 921 921 1 ENSG00000181214.7 OR8G2P chr11 124224732 124225639 + unprocessed_pseudogene KNOWN OTTHUMG00000154394.2 908 908 1 ENSG00000276316.1 OR8G7P chr11 124238420 124239486 + unprocessed_pseudogene KNOWN OTTHUMG00000165974.2 1067 848 2 ENSG00000197849.5 OR8G1 chr11 124249676 124250611 + protein_coding KNOWN OTTHUMG00000189223.1 936 936 1 ENSG00000255298.2 OR8G5 chr11 124264827 124265867 + protein_coding KNOWN OTTHUMG00000186059.1 1041 1041 1 ENSG00000255116.2 SLC5A4P1 chr11 124273970 124274581 + processed_pseudogene KNOWN OTTHUMG00000165976.2 612 612 1 ENSG00000196341.2 OR8D1 chr11 124309812 124310837 - protein_coding KNOWN OTTHUMG00000165977.1 1026 1026 1 ENSG00000163382.10 APOA1BP chr1 156591762 156594299 + protein_coding KNOWN OTTHUMG00000033206.1 2538 1933 23 ENSG00000279116.1 OR8D2 chr11 124319238 124320288 - polymorphic_pseudogene KNOWN OTTHUMG00000165978.1 1051 1051 2 ENSG00000197263.3 OR8D2 chr11 124319262 124320197 - protein_coding KNOWN NA 936 936 1 ENSG00000254976.1 OR8B7P chr11 124324871 124325789 - unprocessed_pseudogene KNOWN OTTHUMG00000165979.1 919 919 1 ENSG00000255225.1 OR8B6P chr11 124338783 124339662 - unprocessed_pseudogene KNOWN OTTHUMG00000165980.1 880 880 1 ENSG00000255030.1 OR8B5P chr11 124357560 124358469 - unprocessed_pseudogene KNOWN OTTHUMG00000165981.1 910 910 1 ENSG00000227737.2 OR8B1P chr11 124365634 124366551 - unprocessed_pseudogene KNOWN OTTHUMG00000154392.1 918 918 1 ENSG00000229254.1 OR8C1P chr11 124376877 124377801 - unprocessed_pseudogene KNOWN OTTHUMG00000154390.1 925 925 1 ENSG00000204293.2 OR8B2 chr11 124382395 124383362 - protein_coding KNOWN OTTHUMG00000165982.1 968 968 1 ENSG00000196661.3 OR8B3 chr11 124396382 124397368 - protein_coding KNOWN OTTHUMG00000165983.1 987 987 1 ENSG00000255048.1 OR8X1P chr11 124404234 124405102 - unprocessed_pseudogene KNOWN OTTHUMG00000165984.1 869 869 1 ENSG00000160818.15 GPATCH4 chr1 156594487 156601496 - protein_coding KNOWN OTTHUMG00000033203.3 7010 4437 85 ENSG00000280090.1 OR8B4 chr11 124423904 124424893 - polymorphic_pseudogene KNOWN OTTHUMG00000165916.1 990 990 2 ENSG00000198657.5 OR8B4 chr11 124423942 124424871 - protein_coding KNOWN NA 930 930 1 ENSG00000197125.2 OR8B8 chr11 124440126 124441158 - protein_coding KNOWN OTTHUMG00000165917.1 1033 1033 1 ENSG00000255510.1 OR8A2P chr11 124460534 124461485 + unprocessed_pseudogene KNOWN OTTHUMG00000165918.1 952 952 1 ENSG00000229386.2 OR8B9P chr11 124480999 124481923 - unprocessed_pseudogene KNOWN OTTHUMG00000154393.2 925 925 1 ENSG00000254646.1 OR8B10P chr11 124516311 124517242 - unprocessed_pseudogene KNOWN OTTHUMG00000165919.1 932 932 1 ENSG00000255315.1 OR8A3P chr11 124531625 124531910 + unprocessed_pseudogene KNOWN OTTHUMG00000165920.1 286 286 1 ENSG00000254937.1 RP11-728D14.6 chr11 124538500 124539334 - unprocessed_pseudogene KNOWN OTTHUMG00000165921.1 835 835 1 ENSG00000170953.2 OR8B12 chr11 124542682 124543679 - protein_coding KNOWN OTTHUMG00000165922.1 998 998 1 ENSG00000196119.6 OR8A1 chr11 124569997 124571142 + protein_coding KNOWN OTTHUMG00000165923.1 1146 1146 1 ENSG00000199562.1 RNU6-37P chr1 10298966 10299072 + snRNA KNOWN NA 107 107 1 ENSG00000280316.1 AL365181.2 chr1 156597173 156599410 + protein_coding KNOWN NA 2238 2094 2 ENSG00000255341.1 OR8Q1P chr11 124601584 124602238 + unprocessed_pseudogene KNOWN OTTHUMG00000165924.1 655 655 1 ENSG00000154143.2 PANX3 chr11 124611490 124620356 + protein_coding KNOWN OTTHUMG00000165925.1 8867 1667 4 ENSG00000154144.11 TBRG1 chr11 124622836 124635398 + protein_coding KNOWN OTTHUMG00000153024.3 12563 6627 59 ENSG00000110013.11 SIAE chr11 124633113 124695707 - protein_coding KNOWN OTTHUMG00000165926.2 62595 8139 43 ENSG00000200278.1 RNA5SP352 chr11 124636459 124636592 + rRNA KNOWN NA 134 134 1 ENSG00000280773.1 AP001524.1 chr11 124636491 124636552 + miRNA NOVEL NA 62 62 1 ENSG00000064199.5 SPA17 chr11 124673798 124697518 + protein_coding KNOWN OTTHUMG00000165927.1 23721 5205 17 ENSG00000154146.11 NRGN chr11 124739846 124747210 + protein_coding KNOWN OTTHUMG00000165928.3 7365 1309 8 ENSG00000255045.1 RP11-677M14.2 chr11 124744634 124746337 - antisense NOVEL OTTHUMG00000165929.1 1704 445 3 ENSG00000019102.10 VSIG2 chr11 124747472 124752238 - protein_coding KNOWN OTTHUMG00000150357.1 4767 1432 13 ENSG00000272971.1 RP11-284F21.11 chr1 156614742 156615288 - lincRNA NOVEL OTTHUMG00000186427.1 547 547 1 ENSG00000149564.10 ESAM chr11 124752583 124762290 - protein_coding KNOWN OTTHUMG00000151986.1 9708 2920 31 ENSG00000250073.2 RP11-677M14.3 chr11 124759129 124765936 + antisense NOVEL OTTHUMG00000165930.1 6808 1538 4 ENSG00000120458.8 MSANTD2 chr11 124766498 124800673 - protein_coding KNOWN OTTHUMG00000165931.1 34176 4245 20 ENSG00000279342.1 AP000866.1 chr11 124789244 124790069 - protein_coding KNOWN NA 826 826 1 ENSG00000254509.1 RP11-677M14.6 chr11 124791228 124791660 + processed_pseudogene KNOWN OTTHUMG00000165932.1 433 433 1 ENSG00000245498.5 RP11-677M14.7 chr11 124800450 124834487 + antisense NOVEL OTTHUMG00000166205.1 34038 4854 8 ENSG00000254941.1 RP11-677M14.5 chr11 124807822 124808269 - processed_pseudogene KNOWN OTTHUMG00000165933.1 448 448 1 ENSG00000154134.13 ROBO3 chr11 124865386 124881470 + protein_coding KNOWN OTTHUMG00000165934.2 16085 7026 169 ENSG00000154133.13 ROBO4 chr11 124883691 124898500 - protein_coding KNOWN OTTHUMG00000165936.2 14810 7033 73 ENSG00000254568.1 RP11-664I21.5 chr11 124883691 124887789 + antisense NOVEL OTTHUMG00000165935.1 4099 744 2 ENSG00000132702.11 HAPLN2 chr1 156619294 156625725 + protein_coding KNOWN OTTHUMG00000033205.4 6432 2241 21 ENSG00000254943.1 RP11-664I21.6 chr11 124891304 124892126 + antisense NOVEL OTTHUMG00000165937.1 823 477 2 ENSG00000165478.6 HEPACAM chr11 124919193 124936412 - protein_coding KNOWN OTTHUMG00000165938.1 17220 3829 11 ENSG00000221932.6 HEPN1 chr11 124919244 124920677 + protein_coding KNOWN OTTHUMG00000165939.1 1434 1434 1 ENSG00000149548.13 CCDC15 chr11 124954121 125041489 + protein_coding KNOWN OTTHUMG00000165940.1 87369 4823 38 ENSG00000134955.10 SLC37A2 chr11 125063067 125090312 + protein_coding KNOWN OTTHUMG00000165879.3 27246 6371 75 ENSG00000150433.8 TMEM218 chr11 125096545 125111763 - protein_coding KNOWN OTTHUMG00000165880.1 15219 5424 80 ENSG00000187686.4 KRT18P59 chr11 125113161 125126781 + transcribed_processed_pseudogene KNOWN OTTHUMG00000165881.1 13621 3338 3 ENSG00000255475.1 RP11-687M24.4 chr11 125132847 125139587 - lincRNA NOVEL OTTHUMG00000165882.1 6741 593 2 ENSG00000254880.1 PKNOX2-AS1 chr11 125158461 125164609 - lincRNA NOVEL OTTHUMG00000165883.1 6149 586 3 ENSG00000165495.14 PKNOX2 chr11 125164687 125433389 + protein_coding KNOWN OTTHUMG00000165884.3 268703 6538 96 ENSG00000272068.1 RP11-284F21.9 chr1 156637783 156641004 - lincRNA NOVEL OTTHUMG00000185553.1 3222 3222 1 ENSG00000259290.1 RP11-687M24.7 chr11 125188115 125191404 + sense_intronic NOVEL OTTHUMG00000172318.1 3290 455 5 ENSG00000254932.2 RP11-687M24.8 chr11 125258626 125266798 - antisense NOVEL OTTHUMG00000172319.1 8173 645 2 ENSG00000222844.1 RNU6-321P chr11 125277552 125277657 + snRNA KNOWN NA 106 106 1 ENSG00000149557.11 FEZ1 chr11 125445745 125496317 - protein_coding KNOWN OTTHUMG00000165886.3 50573 5937 58 ENSG00000255537.1 AP000708.1 chr11 125495214 125499528 + antisense NOVEL OTTHUMG00000133523.3 4315 3423 2 ENSG00000149547.13 EI24 chr11 125569216 125584687 + protein_coding KNOWN OTTHUMG00000165851.6 15472 3558 113 ENSG00000254671.2 STT3A-AS1 chr11 125570284 125592568 - antisense NOVEL OTTHUMG00000165869.1 22285 429 3 ENSG00000222297.1 RNU6-1156P chr11 125574719 125574818 + snRNA KNOWN NA 100 100 1 ENSG00000134910.11 STT3A chr11 125591712 125625215 + protein_coding KNOWN OTTHUMG00000165852.3 33504 7345 113 ENSG00000149554.11 CHEK1 chr11 125625136 125676255 + protein_coding KNOWN OTTHUMG00000165853.5 51120 6558 150 ENSG00000132692.17 BCAN chr1 156641390 156659532 + protein_coding KNOWN OTTHUMG00000033322.2 18143 4931 53 ENSG00000252255.1 RNU2-35P chr11 125649746 125649887 + snRNA KNOWN NA 142 142 1 ENSG00000134940.12 ACRV1 chr11 125671522 125681123 - protein_coding KNOWN OTTHUMG00000165854.1 9602 2212 18 ENSG00000171053.8 PATE1 chr11 125746293 125749867 + protein_coding KNOWN OTTHUMG00000165855.2 3575 2348 11 ENSG00000196844.7 PATE2 chr11 125776113 125778819 - protein_coding KNOWN OTTHUMG00000165856.1 2707 1657 7 ENSG00000236027.2 PATE3 chr11 125788111 125791600 + protein_coding KNOWN OTTHUMG00000165857.1 3490 1336 3 ENSG00000237353.5 PATE4 chr11 125833316 125840069 + protein_coding KNOWN OTTHUMG00000165235.2 6754 2882 7 ENSG00000260209.1 RP11-680F20.10 chr11 125873031 125874528 - lincRNA NOVEL OTTHUMG00000173206.1 1498 1498 3 ENSG00000198331.9 HYLS1 chr11 125883614 125900648 + protein_coding KNOWN OTTHUMG00000165858.1 17035 2999 10 ENSG00000110060.7 PUS3 chr11 125893485 125903221 - protein_coding KNOWN OTTHUMG00000165870.2 9737 2010 16 ENSG00000255027.2 RP11-680F20.9 chr11 125903247 125938916 - antisense NOVEL OTTHUMG00000165871.2 35670 987 6 ENSG00000272405.1 RP11-284F21.10 chr1 156641666 156644887 - antisense NOVEL OTTHUMG00000185554.1 3222 3222 1 ENSG00000109832.11 DDX25 chr11 125903376 125928829 + protein_coding KNOWN OTTHUMG00000165859.6 25454 9232 58 ENSG00000255124.1 RP11-680F20.5 chr11 125939212 125943702 + lincRNA NOVEL OTTHUMG00000165860.1 4491 496 5 ENSG00000254790.1 RP11-680F20.4 chr11 125940496 125941193 - lincRNA NOVEL OTTHUMG00000165872.1 698 698 1 ENSG00000254967.5 RP11-680F20.6 chr11 125950116 125956319 + antisense NOVEL OTTHUMG00000165861.2 6204 1519 11 ENSG00000064309.13 CDON chr11 125955796 126063335 - protein_coding KNOWN OTTHUMG00000165862.2 107540 10600 83 ENSG00000264299.1 RP11-680F20.12 chr11 125957900 125958652 + antisense NOVEL OTTHUMG00000179594.1 753 753 1 ENSG00000254759.1 NAP1L1P1 chr11 126067539 126068601 + processed_pseudogene KNOWN OTTHUMG00000165873.1 1063 1063 1 ENSG00000261257.1 RP11-673E11.2 chr11 126100505 126102413 - lincRNA NOVEL OTTHUMG00000173018.1 1909 1909 1 ENSG00000254833.1 RP11-50B3.2 chr11 126160714 126176035 + lincRNA NOVEL OTTHUMG00000165813.1 15322 569 2 ENSG00000254771.1 RP11-50B3.1 chr11 126179497 126179698 - processed_pseudogene KNOWN OTTHUMG00000165814.1 202 202 1 ENSG00000229953.1 RP11-284F21.7 chr1 156646507 156661424 - antisense NOVEL OTTHUMG00000033321.1 14918 758 2 ENSG00000165526.7 RPUSD4 chr11 126202094 126211692 - protein_coding KNOWN OTTHUMG00000165815.3 9599 4083 43 ENSG00000254694.1 RP11-50B3.4 chr11 126208611 126209027 - antisense NOVEL OTTHUMG00000165816.1 417 362 2 ENSG00000197798.7 FAM118B chr11 126211414 126262986 + protein_coding KNOWN OTTHUMG00000165817.2 51573 3846 61 ENSG00000222067.1 RNU4-86P chr11 126214260 126214478 - snRNA KNOWN NA 219 219 1 ENSG00000240098.3 RN7SL351P chr11 126245035 126245282 + misc_RNA KNOWN NA 248 248 1 ENSG00000182934.10 SRPR chr11 126262919 126269144 - protein_coding KNOWN OTTHUMG00000165826.2 6226 4167 43 ENSG00000110074.9 FOXRED1 chr11 126269055 126278131 + protein_coding KNOWN OTTHUMG00000165827.1 9077 5657 110 ENSG00000243607.3 RPL35AP26 chr11 126278257 126278577 - processed_pseudogene KNOWN OTTHUMG00000158480.3 321 321 1 ENSG00000150455.12 TIRAP chr11 126283065 126298845 + protein_coding KNOWN OTTHUMG00000140373.4 15781 3591 34 ENSG00000254905.1 RP11-712L6.7 chr11 126292922 126294254 - antisense NOVEL OTTHUMG00000166619.1 1333 492 2 ENSG00000132688.10 NES chr1 156668763 156677397 - protein_coding KNOWN OTTHUMG00000034299.2 8635 5558 4 ENSG00000255062.1 RP11-712L6.5 chr11 126294298 126304318 - antisense NOVEL OTTHUMG00000165828.1 10021 629 4 ENSG00000110063.7 DCPS chr11 126303752 126345749 + protein_coding KNOWN OTTHUMG00000165829.1 41998 3352 12 ENSG00000280832.1 ST3GAL4-AS1 chr11 126340889 126355587 - antisense KNOWN OTTHUMG00000189590.1 14699 3723 5 ENSG00000110080.17 ST3GAL4 chr11 126355640 126440344 + protein_coding KNOWN OTTHUMG00000165830.3 84705 4465 173 ENSG00000278215.1 RP11-712L6.8 chr11 126376773 126376893 - processed_pseudogene KNOWN OTTHUMG00000187785.1 121 121 1 ENSG00000149571.9 KIRREL3 chr11 126423359 127003460 - protein_coding KNOWN OTTHUMG00000165831.2 580102 6599 85 ENSG00000257271.1 KIRREL3-AS1 chr11 126543947 126610948 + antisense NOVEL OTTHUMG00000169624.1 67002 586 2 ENSG00000254607.2 RP11-115C10.1 chr11 126652852 126682104 + antisense NOVEL OTTHUMG00000165802.2 29253 486 4 ENSG00000254938.1 RP11-688I9.4 chr11 126920188 126940659 - lincRNA NOVEL OTTHUMG00000165809.1 20472 566 2 ENSG00000279358.1 RP11-688I9.5 chr11 126934886 126937150 - TEC KNOWN OTTHUMG00000186081.1 2265 2265 1 ENSG00000237588.2 RP11-66D17.3 chr1 156687695 156691997 - lincRNA NOVEL OTTHUMG00000041297.2 4303 4122 2 ENSG00000254960.2 KIRREL3-AS2 chr11 126940746 126945090 + antisense KNOWN OTTHUMG00000165803.2 4345 494 6 ENSG00000266215.1 MIR3167 chr11 126988458 126988542 - miRNA KNOWN NA 85 85 1 ENSG00000255317.1 RP11-688I9.2 chr11 126992452 126995458 + antisense NOVEL OTTHUMG00000165804.1 3007 462 2 ENSG00000218109.5 KIRREL3-AS3 chr11 127002910 127006058 + antisense KNOWN OTTHUMG00000165805.2 3149 1768 5 ENSG00000255546.1 RP11-168K9.1 chr11 127021754 127053553 + lincRNA NOVEL OTTHUMG00000165810.1 31800 572 3 ENSG00000255087.2 RP11-168K9.2 chr11 127067002 127101320 + lincRNA NOVEL OTTHUMG00000165811.2 34319 2337 3 ENSG00000272981.1 CTD-2234N14.2 chr11 127119326 127139735 + lincRNA NOVEL OTTHUMG00000186082.1 20410 561 3 ENSG00000272642.1 CTD-2234N14.1 chr11 127190769 127223449 + lincRNA NOVEL OTTHUMG00000186083.1 32681 414 5 ENSG00000273409.1 RP11-480C22.1 chr11 127271062 127337033 + lincRNA NOVEL OTTHUMG00000186084.1 65972 503 3 ENSG00000222774.1 RN7SKP121 chr11 127406028 127406332 - misc_RNA KNOWN NA 305 305 1 ENSG00000143320.7 CRABP2 chr1 156699606 156705816 - protein_coding KNOWN OTTHUMG00000041300.2 6211 1100 17 ENSG00000223315.1 RN7SKP279 chr11 127407851 127408148 + misc_RNA KNOWN NA 298 298 1 ENSG00000254591.1 RP11-822P1.1 chr11 127657568 127657877 + processed_pseudogene KNOWN OTTHUMG00000165801.1 310 310 1 ENSG00000254612.2 RP11-676M6.1 chr11 127940913 127941654 - processed_pseudogene KNOWN OTTHUMG00000165798.2 742 742 1 ENSG00000273415.1 RP11-702B10.2 chr11 128180427 128183554 + lincRNA NOVEL OTTHUMG00000186085.1 3128 951 2 ENSG00000272575.4 RP11-702B10.1 chr11 128208829 128241441 + lincRNA NOVEL OTTHUMG00000186086.2 32613 676 7 ENSG00000134954.13 ETS1 chr11 128458761 128587558 - protein_coding KNOWN OTTHUMG00000165799.3 128798 7149 48 ENSG00000276176.1 MIR6090 chr11 128522390 128522449 + miRNA KNOWN NA 60 60 1 ENSG00000254588.1 RP11-1007G5.2 chr11 128526142 128530389 + antisense NOVEL OTTHUMG00000165800.1 4248 1387 4 ENSG00000270160.1 RP11-264E20.2 chr11 128614340 128615236 - lincRNA NOVEL OTTHUMG00000184135.1 897 897 1 ENSG00000255465.3 RP11-264E20.1 chr11 128615867 128621806 - lincRNA NOVEL OTTHUMG00000165790.3 5940 1157 3 ENSG00000264501.2 RN7SL731P chr1 10306465 10306757 + misc_RNA KNOWN NA 293 293 1 ENSG00000223356.1 RP11-66D17.5 chr1 156712212 156713174 - antisense NOVEL OTTHUMG00000041299.1 963 433 2 ENSG00000245008.3 RP11-744N12.3 chr11 128629653 128686922 - antisense NOVEL OTTHUMG00000165791.2 57270 2255 6 ENSG00000151702.15 FLI1 chr11 128686535 128813267 + protein_coding KNOWN OTTHUMG00000165792.3 126733 8172 62 ENSG00000254703.2 SENCR chr11 128691672 128696023 - antisense NOVEL OTTHUMG00000165793.2 4352 1298 3 ENSG00000151704.14 KCNJ1 chr11 128836315 128867373 - protein_coding KNOWN OTTHUMG00000048247.2 31059 4637 20 ENSG00000255369.1 RP11-740D6.3 chr11 128880325 128880668 - processed_pseudogene KNOWN OTTHUMG00000165794.1 344 344 1 ENSG00000120457.10 KCNJ5 chr11 128891356 128921035 + protein_coding KNOWN OTTHUMG00000165795.1 29680 6109 9 ENSG00000174370.8 C11orf45 chr11 128899565 128906035 - protein_coding KNOWN OTTHUMG00000165796.1 6471 3750 11 ENSG00000120471.13 TP53AIP1 chr11 128934731 128943399 - protein_coding KNOWN OTTHUMG00000165797.2 8669 3445 22 ENSG00000134909.17 ARHGAP32 chr11 128965060 129279324 - protein_coding KNOWN OTTHUMG00000165774.3 314265 12841 95 ENSG00000212597.1 RNU6-876P chr11 128993237 128993340 - snRNA KNOWN NA 104 104 1 ENSG00000143319.15 ISG20L2 chr1 156721891 156728799 - protein_coding KNOWN OTTHUMG00000041301.3 6909 5262 16 ENSG00000206847.1 Y_RNA chr11 129030459 129030572 + misc_RNA NOVEL NA 114 114 1 ENSG00000199260.1 RNU6-874P chr11 129202966 129203070 + snRNA KNOWN NA 105 105 1 ENSG00000255259.2 ZNF123P chr11 129295286 129296481 - processed_pseudogene KNOWN OTTHUMG00000165775.2 1196 1196 1 ENSG00000043039.6 BARX2 chr11 129375940 129452279 + protein_coding KNOWN OTTHUMG00000165776.4 76340 3660 5 ENSG00000240121.1 RPS27P20 chr11 129537869 129538114 + processed_pseudogene KNOWN OTTHUMG00000158482.1 246 246 1 ENSG00000281386.1 RP11-237N19.3 chr11 129591493 129612110 + lincRNA NOVEL OTTHUMG00000189542.1 20618 527 2 ENSG00000281097.1 LINC01395 chr11 129612116 129617269 - lincRNA KNOWN OTTHUMG00000189543.1 5154 982 4 ENSG00000255188.1 RP11-507F16.1 chr11 129788064 129788190 - processed_pseudogene KNOWN OTTHUMG00000165759.1 127 127 1 ENSG00000151715.6 TMEM45B chr11 129815819 129860003 + protein_coding KNOWN OTTHUMG00000165760.2 44185 3027 23 ENSG00000170322.13 NFRKB chr11 129863636 129895590 - protein_coding KNOWN OTTHUMG00000165761.2 31955 6335 136 ENSG00000143303.10 RRNAD1 chr1 156728442 156736960 + protein_coding KNOWN OTTHUMG00000041302.8 8519 3169 46 ENSG00000170325.13 PRDM10 chr11 129899706 130002835 - protein_coding KNOWN OTTHUMG00000165762.1 103130 6626 140 ENSG00000233220.3 LINC00167 chr11 130002938 130004356 + lincRNA KNOWN OTTHUMG00000165763.1 1419 1419 1 ENSG00000255057.1 RP11-567M21.3 chr11 130008586 130009765 + processed_pseudogene KNOWN OTTHUMG00000165764.1 1180 1180 1 ENSG00000255262.3 TCEB2P2 chr11 130032866 130033220 - processed_pseudogene KNOWN OTTHUMG00000165765.1 355 355 1 ENSG00000255535.2 RP11-679I18.4 chr11 130040365 130041071 + processed_pseudogene KNOWN OTTHUMG00000165766.2 707 707 1 ENSG00000084234.15 APLP2 chr11 130069837 130144811 + protein_coding KNOWN OTTHUMG00000165767.2 74975 7451 167 ENSG00000244451.1 RPL34P21 chr11 130082495 130082781 - processed_pseudogene KNOWN OTTHUMG00000158483.1 287 287 1 ENSG00000274197.1 U4 chr11 130114251 130114335 - snRNA NOVEL NA 85 85 1 ENSG00000277300.1 AP003041.1 chr11 130121672 130121780 - miRNA NOVEL NA 109 109 1 ENSG00000149418.9 ST14 chr11 130159562 130210376 + protein_coding KNOWN OTTHUMG00000165768.1 50815 4350 36 ENSG00000143314.11 MRPL24 chr1 156737303 156741590 - protein_coding KNOWN OTTHUMG00000041296.2 4288 1695 28 ENSG00000196323.10 ZBTB44 chr11 130226677 130314686 - protein_coding KNOWN OTTHUMG00000165769.3 88010 10803 64 ENSG00000255358.1 RP11-567O18.1 chr11 130285023 130285833 - processed_pseudogene KNOWN OTTHUMG00000165770.1 811 510 2 ENSG00000255220.1 DDX18P5 chr11 130295641 130296946 + processed_pseudogene KNOWN OTTHUMG00000165771.1 1306 1306 1 ENSG00000272412.2 Metazoa_SRP chr11 130310180 130310476 + misc_RNA NOVEL NA 297 297 1 ENSG00000175773.11 RP11-121M22.1 chr11 130314993 130403657 + lincRNA NOVEL OTTHUMG00000165655.4 88665 2628 17 ENSG00000134917.9 ADAMTS8 chr11 130404925 130428993 - protein_coding KNOWN OTTHUMG00000165656.2 24069 4523 13 ENSG00000166106.3 ADAMTS15 chr11 130448974 130476641 + protein_coding KNOWN OTTHUMG00000165657.2 27668 5673 8 ENSG00000255155.1 RP11-535N6.2 chr11 130544643 130544856 - processed_pseudogene KNOWN OTTHUMG00000165658.1 214 214 1 ENSG00000236616.3 BAK1P2 chr11 130546799 130547429 - processed_pseudogene KNOWN OTTHUMG00000165659.1 631 631 1 ENSG00000274490.1 AP004371.1 chr11 130569460 130569527 + miRNA NOVEL NA 68 68 1 ENSG00000143321.17 HDGF chr1 156742107 156766925 - protein_coding KNOWN OTTHUMG00000041295.1 24819 3745 57 ENSG00000274999.1 MIR8052 chr11 130666735 130666803 + miRNA KNOWN NA 69 69 1 ENSG00000175728.3 C11orf44 chr11 130672956 130717352 + protein_coding KNOWN OTTHUMG00000150705.1 44397 3547 6 ENSG00000255352.1 PPP1R10P1 chr11 130789231 130791025 - processed_pseudogene KNOWN OTTHUMG00000165660.1 1795 1795 1 ENSG00000254842.5 RP11-890B15.2 chr11 130844191 130865561 - lincRNA NOVEL OTTHUMG00000165661.2 21371 2255 11 ENSG00000255455.2 RP11-890B15.3 chr11 130866254 130870247 - lincRNA NOVEL OTTHUMG00000165662.2 3994 3994 1 ENSG00000120451.9 SNX19 chr11 130875436 130916509 - protein_coding KNOWN OTTHUMG00000165663.1 41074 8152 86 ENSG00000242673.3 RN7SL167P chr11 131004128 131004429 - misc_RNA KNOWN NA 302 302 1 ENSG00000221516.1 AP002806.1 chr11 131111935 131112015 - miRNA NOVEL NA 81 81 1 ENSG00000236129.1 AP002856.4 chr11 131187022 131189753 + lincRNA NOVEL OTTHUMG00000066362.2 2732 635 2 ENSG00000227125.1 AP002856.6 chr11 131204999 131215163 + lincRNA NOVEL OTTHUMG00000150049.1 10165 562 2 ENSG00000143294.13 PRCC chr1 156750610 156800817 + protein_coding KNOWN OTTHUMG00000041294.4 50208 4108 28 ENSG00000237612.1 AP002856.7 chr11 131234538 131251816 + lincRNA NOVEL OTTHUMG00000150045.1 17279 569 2 ENSG00000231698.2 AP002856.5 chr11 131253422 131350917 + lincRNA NOVEL OTTHUMG00000066363.2 97496 1193 4 ENSG00000182667.13 NTM chr11 131370478 132336822 + protein_coding KNOWN OTTHUMG00000066364.15 966345 6956 106 ENSG00000252351.1 RNU6ATAC12P chr11 131385249 131385363 + snRNA KNOWN NA 115 115 1 ENSG00000237654.4 AP003025.2 chr11 131502759 131540867 - antisense NOVEL OTTHUMG00000066440.1 38109 4715 14 ENSG00000236082.2 RP11-217L21.1 chr11 131546662 131573600 - antisense NOVEL OTTHUMG00000184004.1 26939 149 2 ENSG00000224795.1 C11orf39 chr11 131662131 131663583 - lincRNA NOVEL OTTHUMG00000066439.2 1453 703 2 ENSG00000271624.1 RP11-651K21.1 chr11 131770795 131771638 - processed_pseudogene KNOWN OTTHUMG00000184781.1 844 844 1 ENSG00000238117.1 AP004372.1 chr11 131877680 131897108 - antisense NOVEL OTTHUMG00000150050.1 19429 509 2 ENSG00000224700.2 RP11-697E14.2 chr11 131981096 131984661 - antisense NOVEL OTTHUMG00000184005.1 3566 577 2 ENSG00000027869.10 SH2D2A chr1 156806243 156816862 - protein_coding KNOWN OTTHUMG00000041305.2 10620 2512 37 ENSG00000238262.1 NTM-IT chr11 132284302 132285081 + sense_intronic NOVEL OTTHUMG00000150047.1 780 373 2 ENSG00000279090.1 RP11-684N3.1 chr11 132403360 132404060 - TEC KNOWN OTTHUMG00000163670.3 701 701 1 ENSG00000183715.12 OPCML chr11 132414977 133532519 - protein_coding KNOWN OTTHUMG00000163658.4 1117543 7583 51 ENSG00000279497.1 RP11-654C20.1 chr11 132771623 132773371 - TEC KNOWN OTTHUMG00000167115.1 1749 1749 1 ENSG00000255371.1 OPCML-IT2 chr11 132859245 132860077 - sense_intronic NOVEL OTTHUMG00000167116.1 833 398 2 ENSG00000279711.1 AP004782.1 chr11 133064697 133068129 + TEC KNOWN OTTHUMG00000167084.1 3433 3433 1 ENSG00000280900.1 AP003972.1 chr11 133257701 133257804 - miRNA NOVEL NA 104 104 1 ENSG00000279189.1 RP11-861E23.2 chr11 133297189 133302634 - TEC KNOWN OTTHUMG00000167117.1 5446 5446 1 ENSG00000254896.1 OPCML-IT1 chr11 133360029 133366080 - sense_intronic NOVEL OTTHUMG00000167118.1 6052 2936 2 ENSG00000238504.1 AP005638.1 chr11 133502877 133502956 + miRNA NOVEL NA 80 80 1 ENSG00000198400.10 NTRK1 chr1 156815640 156881850 + protein_coding KNOWN OTTHUMG00000041304.2 66211 4356 112 ENSG00000255258.2 RP11-448P19.1 chr11 133783671 133810376 - lincRNA NOVEL OTTHUMG00000167119.3 26706 975 3 ENSG00000166118.6 SPATA19 chr11 133840631 133845538 - protein_coding KNOWN OTTHUMG00000167120.1 4908 898 14 ENSG00000213153.3 RP11-259P6.3 chr11 133864877 133865627 - processed_pseudogene KNOWN OTTHUMG00000167121.1 751 751 1 ENSG00000280237.1 MIR4697HG chr11 133896438 133901601 - TEC KNOWN OTTHUMG00000167122.1 5164 5164 1 ENSG00000264919.1 MIR4697 chr11 133898504 133898581 - miRNA KNOWN NA 78 78 1 ENSG00000080854.13 IGSF9B chr11 133908564 133956985 - protein_coding KNOWN OTTHUMG00000167124.2 48422 5753 64 ENSG00000255406.1 RP11-713P17.5 chr11 134026987 134028118 + lincRNA NOVEL OTTHUMG00000167171.1 1132 516 2 ENSG00000204241.6 RP11-713P17.3 chr11 134032272 134046849 + lincRNA NOVEL OTTHUMG00000167125.1 14578 4032 17 ENSG00000254648.1 RP11-713P17.4 chr11 134035832 134037107 - lincRNA NOVEL OTTHUMG00000167126.1 1276 1130 2 ENSG00000166086.11 JAM3 chr11 134068925 134152001 + protein_coding KNOWN OTTHUMG00000167130.5 83077 5451 44 ENSG00000027644.4 INSRR chr1 156840063 156859018 - protein_coding KNOWN OTTHUMG00000041291.1 18956 5101 22 ENSG00000254481.1 PTP4A2P2 chr11 134123828 134124329 - processed_pseudogene KNOWN OTTHUMG00000167127.1 502 502 1 ENSG00000151503.11 NCAPD3 chr11 134150119 134225454 - protein_coding KNOWN OTTHUMG00000167172.5 75336 9114 141 ENSG00000254616.1 RP11-700F16.2 chr11 134173095 134173680 + processed_pseudogene KNOWN OTTHUMG00000167173.1 586 586 1 ENSG00000255348.1 RP11-700F16.3 chr11 134178824 134186166 + antisense NOVEL OTTHUMG00000167174.1 7343 334 2 ENSG00000151502.9 VPS26B chr11 134224645 134247792 + protein_coding KNOWN OTTHUMG00000167175.4 23148 6483 27 ENSG00000151500.13 THYN1 chr11 134248279 134253370 - protein_coding KNOWN OTTHUMG00000167176.1 5092 2119 48 ENSG00000151498.10 ACAD8 chr11 134253495 134265855 + protein_coding KNOWN OTTHUMG00000167177.1 12361 7174 102 ENSG00000166105.14 GLB1L3 chr11 134274245 134319564 + protein_coding KNOWN OTTHUMG00000133524.3 45320 8945 75 ENSG00000254442.1 AP000859.4 chr11 134316782 134317088 - processed_pseudogene KNOWN OTTHUMG00000167178.1 307 307 1 ENSG00000149328.13 GLB1L2 chr11 134331874 134378341 + protein_coding KNOWN OTTHUMG00000167179.2 46468 7280 72 ENSG00000187800.12 PEAR1 chr1 156893698 156916434 + protein_coding KNOWN OTTHUMG00000041293.3 22737 5530 83 ENSG00000109956.11 B3GAT1 chr11 134378504 134411918 - protein_coding KNOWN OTTHUMG00000167180.1 33415 11425 26 ENSG00000255545.6 RP11-627G23.1 chr11 134436473 134505661 + processed_transcript NOVEL OTTHUMG00000167181.3 69189 8255 16 ENSG00000254573.1 AP004550.1 chr11 134563396 134573056 + lincRNA NOVEL OTTHUMG00000165125.1 9661 514 3 ENSG00000254989.1 RP11-469N6.3 chr11 134671426 134672024 - lincRNA NOVEL OTTHUMG00000167182.1 599 389 2 ENSG00000255344.1 RP11-469N6.2 chr11 134714542 134715922 + lincRNA NOVEL OTTHUMG00000167183.1 1381 455 2 ENSG00000251226.1 RP11-469N6.1 chr11 134735596 134763810 + lincRNA NOVEL OTTHUMG00000165126.2 28215 3684 2 ENSG00000255327.1 RP11-555G19.1 chr11 134950708 134951568 + lincRNA NOVEL OTTHUMG00000167185.1 861 762 2 ENSG00000279046.1 RP11-555G19.2 chr11 134985683 134986799 + TEC KNOWN OTTHUMG00000167187.1 1117 1117 1 ENSG00000255512.1 AP005135.2 chr11 135061781 135075899 - lincRNA NOVEL OTTHUMG00000167188.1 14119 714 3 ENSG00000256263.1 DDX11L8 chr12 12310 13501 + unprocessed_pseudogene KNOWN OTTHUMG00000168013.1 1192 366 4 ENSG00000142657.19 PGD chr1 10398592 10420144 + protein_coding KNOWN OTTHUMG00000001905.3 21553 2966 54 ENSG00000160838.12 LRRC71 chr1 156920650 156933094 + protein_coding KNOWN OTTHUMG00000041298.1 12445 2631 38 ENSG00000226210.3 WASH7P chr12 14522 32015 - unprocessed_pseudogene KNOWN OTTHUMG00000167919.5 17494 1817 11 ENSG00000273823.1 AC215219.2 chr12 17484 17551 - miRNA NOVEL NA 68 68 1 ENSG00000238823.1 AC215219.1 chr12 32418 32555 + miRNA NOVEL NA 138 138 1 ENSG00000249054.2 FAM138D chr12 36602 38133 - lincRNA NOVEL OTTHUMG00000167962.2 1532 1289 5 ENSG00000120645.10 IQSEC3 chr12 66765 178460 + protein_coding KNOWN OTTHUMG00000167975.4 111696 7686 36 ENSG00000256948.1 RP11-598F7.3 chr12 106524 111850 - antisense NOVEL OTTHUMG00000167976.1 5327 586 2 ENSG00000249695.5 RP11-598F7.4 chr12 137411 149169 - antisense NOVEL OTTHUMG00000167977.2 11759 5439 17 ENSG00000256694.1 RP11-598F7.5 chr12 164664 166321 - antisense NOVEL OTTHUMG00000167978.1 1658 1101 2 ENSG00000256540.1 RP11-598F7.6 chr12 166856 182399 - lincRNA NOVEL OTTHUMG00000167979.1 15544 1184 5 ENSG00000111181.11 SLC6A12 chr12 190077 214570 - protein_coding KNOWN OTTHUMG00000090309.6 24494 5280 116 ENSG00000132694.17 ARHGEF11 chr1 156934840 157045370 - protein_coding KNOWN OTTHUMG00000041292.1 110531 8950 114 ENSG00000255671.1 RP11-283I3.1 chr12 193036 194130 + antisense NOVEL OTTHUMG00000168004.1 1095 315 2 ENSG00000256577.2 RP11-283I3.2 chr12 203642 205094 + antisense NOVEL OTTHUMG00000168005.2 1453 765 3 ENSG00000010379.14 SLC6A13 chr12 220621 262873 - protein_coding KNOWN OTTHUMG00000168053.2 42253 4243 67 ENSG00000255746.1 RP11-283I3.4 chr12 253442 257299 - sense_intronic NOVEL OTTHUMG00000168054.1 3858 503 3 ENSG00000261799.1 RP11-283I3.6 chr12 273954 277123 - sense_overlapping NOVEL OTTHUMG00000172900.1 3170 3170 1 ENSG00000073614.10 KDM5A chr12 280129 389454 - protein_coding KNOWN OTTHUMG00000168055.1 109326 12106 95 ENSG00000120647.8 CCDC77 chr12 389273 442645 + protein_coding KNOWN OTTHUMG00000129214.2 53373 3614 86 ENSG00000139044.9 B4GALNT3 chr12 460364 563509 + protein_coding KNOWN OTTHUMG00000129283.4 103146 6357 59 ENSG00000171840.10 NINJ2 chr12 564296 663779 - protein_coding KNOWN OTTHUMG00000090311.4 99484 2048 16 ENSG00000256020.1 RP5-1154L15.2 chr12 585865 586486 - sense_intronic NOVEL OTTHUMG00000168057.1 622 373 2 ENSG00000211581.1 MIR765 chr1 156936131 156936244 - miRNA KNOWN NA 114 114 1 ENSG00000238370.1 RNU7-103P chr12 589530 589589 - snRNA KNOWN NA 60 60 1 ENSG00000255825.1 RP5-1154L15.1 chr12 590633 591269 + antisense NOVEL OTTHUMG00000168058.1 637 389 2 ENSG00000177406.4 RP11-218M22.1 chr12 630891 663706 + antisense NOVEL OTTHUMG00000168059.1 32816 3530 10 ENSG00000256672.1 RP11-218M22.2 chr12 674801 684127 - lincRNA NOVEL OTTHUMG00000168085.1 9327 496 3 ENSG00000060237.15 WNK1 chr12 752593 911452 + protein_coding KNOWN OTTHUMG00000090321.4 158860 14370 194 ENSG00000221439.1 RNU4ATAC16P chr12 781133 781258 + snRNA KNOWN NA 126 126 1 ENSG00000002016.15 RAD52 chr12 912077 990053 - protein_coding KNOWN OTTHUMG00000090361.4 77977 4190 171 ENSG00000250132.5 RP11-359B12.2 chr12 974133 991190 - antisense NOVEL OTTHUMG00000185787.1 17058 3669 10 ENSG00000082805.18 ERC1 chr12 990509 1495933 + protein_coding KNOWN OTTHUMG00000130138.11 505425 13484 274 ENSG00000275811.1 HTR1DP1 chr12 1151810 1153059 - processed_pseudogene KNOWN OTTHUMG00000187789.1 1250 888 2 ENSG00000266160.2 RN7SL612P chr1 156985755 156986049 - misc_RNA KNOWN NA 295 295 1 ENSG00000249028.2 RP5-951N9.1 chr12 1380060 1391502 - antisense NOVEL OTTHUMG00000168150.1 11443 2088 2 ENSG00000267285.1 RP5-951N9.2 chr12 1385833 1386987 + sense_intronic NOVEL OTTHUMG00000181960.1 1155 574 2 ENSG00000249628.2 LINC00942 chr12 1500525 1507318 - lincRNA NOVEL OTTHUMG00000168151.1 6794 2417 3 ENSG00000111186.11 WNT5B chr12 1529891 1647243 + protein_coding KNOWN OTTHUMG00000090375.2 117353 4305 37 ENSG00000171823.6 FBXL14 chr12 1565993 1594165 - protein_coding KNOWN OTTHUMG00000090369.3 28173 2287 4 ENSG00000266043.1 MIR3649 chr12 1660315 1660380 - miRNA KNOWN NA 66 66 1 ENSG00000006831.9 ADIPOR2 chr12 1688574 1788678 + protein_coding KNOWN OTTHUMG00000130139.2 100105 5878 24 ENSG00000271500.1 RP11-288K12.1 chr12 1695830 1698044 - processed_pseudogene KNOWN OTTHUMG00000184716.1 2215 1979 2 ENSG00000243663.1 RPS4XP14 chr12 1757231 1758011 - processed_pseudogene KNOWN OTTHUMG00000157376.1 781 781 1 ENSG00000151062.13 CACNA2D4 chr12 1791957 1918836 - protein_coding KNOWN OTTHUMG00000168111.4 126880 7639 408 ENSG00000237842.2 RP11-110J1.2 chr1 157059232 157060762 - processed_pseudogene KNOWN OTTHUMG00000041328.2 1531 1531 1 ENSG00000166159.9 LRTM2 chr12 1820267 1836752 + protein_coding KNOWN OTTHUMG00000168088.2 16486 4277 42 ENSG00000256706.1 RP5-1096D14.3 chr12 1917951 1922867 + antisense NOVEL OTTHUMG00000168135.1 4917 315 2 ENSG00000235049.1 LINC00940 chr12 1929202 1936574 - lincRNA NOVEL OTTHUMG00000168112.1 7373 2350 2 ENSG00000151065.12 DCP1B chr12 1946054 2004535 - protein_coding KNOWN OTTHUMG00000168113.3 58482 4609 41 ENSG00000151067.19 CACNA1C chr12 1970786 2697950 + protein_coding KNOWN OTTHUMG00000150243.10 727165 19103 1342 ENSG00000203593.3 RP5-1096D14.6 chr12 2004666 2011392 + antisense NOVEL OTTHUMG00000168336.1 6727 629 2 ENSG00000256837.1 CACNA1C-IT1 chr12 2018213 2020532 + sense_intronic NOVEL OTTHUMG00000168337.1 2320 687 2 ENSG00000256257.1 CACNA1C-IT2 chr12 2048352 2049463 + sense_intronic NOVEL OTTHUMG00000168338.1 1112 589 2 ENSG00000278255.1 RP1-53O8.2 chr12 2217462 2217920 - antisense NOVEL OTTHUMG00000188146.1 459 459 1 ENSG00000256025.1 CACNA1C-AS4 chr12 2220537 2223479 - antisense NOVEL OTTHUMG00000168136.1 2943 735 4 ENSG00000224520.2 KRT8P45 chr1 157073257 157074703 + processed_pseudogene KNOWN OTTHUMG00000041329.2 1447 1447 1 ENSG00000256721.1 CACNA1C-IT3 chr12 2269776 2288937 + sense_intronic NOVEL OTTHUMG00000168201.1 19162 622 3 ENSG00000256769.1 CACNA1C-AS3 chr12 2603350 2607440 - antisense NOVEL OTTHUMG00000168137.1 4091 444 2 ENSG00000203648.3 AC007618.3 chr12 2659937 2660969 + processed_pseudogene KNOWN OTTHUMG00000150244.2 1033 732 2 ENSG00000256271.1 CACNA1C-AS2 chr12 2668500 2672220 - antisense NOVEL OTTHUMG00000168138.1 3721 609 2 ENSG00000246627.5 CACNA1C-AS1 chr12 2676001 2691200 - antisense NOVEL OTTHUMG00000168139.1 15200 2639 9 ENSG00000274659.1 RP11-986G18.2 chr12 2740093 2742855 + lincRNA NOVEL OTTHUMG00000187093.1 2763 567 3 ENSG00000256150.1 RP11-885B4.1 chr12 2742626 2771908 - lincRNA NOVEL OTTHUMG00000168140.1 29283 220 2 ENSG00000256902.1 IQSEC3P1 chr12 2752597 2753132 - processed_pseudogene KNOWN OTTHUMG00000168141.1 536 536 1 ENSG00000255669.1 RP11-885B4.2 chr12 2761200 2770455 - lincRNA NOVEL OTTHUMG00000168142.2 9256 550 4 ENSG00000224438.3 RP4-816N1.1 chr12 2781904 2782371 + processed_pseudogene KNOWN OTTHUMG00000157381.1 468 468 1 ENSG00000253831.1 ETV3L chr1 157092044 157099808 - protein_coding KNOWN OTTHUMG00000041325.2 7765 1976 5 ENSG00000256030.1 CBX3P4 chr12 2786931 2794295 - transcribed_processed_pseudogene KNOWN OTTHUMG00000168104.1 7365 653 4 ENSG00000004478.7 FKBP4 chr12 2794953 2805423 + protein_coding KNOWN OTTHUMG00000090429.3 10471 5180 28 ENSG00000258325.2 RP4-816N1.6 chr12 2796877 2812902 - antisense NOVEL OTTHUMG00000169389.2 16026 761 6 ENSG00000258092.1 RP4-816N1.7 chr12 2797136 2803938 - antisense NOVEL OTTHUMG00000169390.1 6803 287 2 ENSG00000111203.10 ITFG2 chr12 2812622 2859791 + protein_coding KNOWN OTTHUMG00000130617.3 47170 6250 68 ENSG00000053702.13 NRIP2 chr12 2825348 2835544 - protein_coding KNOWN OTTHUMG00000130616.4 10197 2803 15 ENSG00000111206.11 FOXM1 chr12 2857681 2877155 - protein_coding KNOWN OTTHUMG00000168118.1 19475 4899 59 ENSG00000171792.9 RHNO1 chr12 2876258 2889523 + protein_coding KNOWN OTTHUMG00000158557.2 13266 2643 28 ENSG00000078246.14 TULP3 chr12 2877223 2941140 + protein_coding KNOWN OTTHUMG00000168152.1 63918 3181 79 ENSG00000278356.1 RP11-372B4.3 chr12 2885819 2886329 + sense_intronic NOVEL OTTHUMG00000187094.1 511 456 2 ENSG00000117036.10 ETV3 chr1 157121191 157138474 - protein_coding KNOWN OTTHUMG00000034298.2 17284 6707 12 ENSG00000252996.1 RNU6-1315P chr12 2954240 2954338 - snRNA KNOWN NA 99 99 1 ENSG00000197905.7 TEAD4 chr12 2959330 3040673 + protein_coding KNOWN OTTHUMG00000168153.1 81344 2272 62 ENSG00000250899.3 RP11-253E3.3 chr12 3041437 3044950 + lincRNA NOVEL OTTHUMG00000168179.2 3514 3514 1 ENSG00000234589.4 RP11-253E3.1 chr12 3071532 3072145 - processed_pseudogene KNOWN OTTHUMG00000157386.1 614 614 1 ENSG00000011105.10 TSPAN9 chr12 3077355 3286564 + protein_coding KNOWN OTTHUMG00000150333.3 209210 5714 40 ENSG00000278469.1 Metazoa_SRP chr12 3124777 3125063 + misc_RNA NOVEL NA 287 287 1 ENSG00000256197.1 TSPAN9-IT1 chr12 3149797 3151476 + sense_intronic NOVEL OTTHUMG00000168180.1 1680 562 2 ENSG00000275850.1 RP11-543P15.3 chr12 3171657 3174056 + sense_intronic NOVEL OTTHUMG00000187095.1 2400 2400 1 ENSG00000227081.5 RP11-543P15.1 chr12 3211663 3211917 - processed_pseudogene KNOWN OTTHUMG00000157388.2 255 255 1 ENSG00000250770.2 RP5-1063M23.1 chr12 3296202 3300224 - lincRNA NOVEL OTTHUMG00000168181.1 4023 2303 2 ENSG00000235700.1 CYCSP52 chr1 157128362 157128671 + processed_pseudogene KNOWN OTTHUMG00000041326.1 310 310 1 ENSG00000236908.2 RP5-1063M23.2 chr12 3318718 3325343 + lincRNA NOVEL OTTHUMG00000168182.1 6626 3004 5 ENSG00000257048.1 RP11-476M19.2 chr12 3367833 3371346 + lincRNA NOVEL OTTHUMG00000168183.1 3514 515 3 ENSG00000111218.10 PRMT8 chr12 3381349 3593973 + protein_coding KNOWN OTTHUMG00000128493.4 212625 6644 41 ENSG00000256691.1 RP11-476M19.3 chr12 3462718 3463586 - antisense NOVEL OTTHUMG00000168184.1 869 530 2 ENSG00000243507.1 RP11-476M19.1 chr12 3468950 3469296 + processed_pseudogene KNOWN OTTHUMG00000157395.1 347 347 1 ENSG00000130038.8 CRACR2A chr12 3606633 3764819 - protein_coding KNOWN OTTHUMG00000168185.2 158187 12466 55 ENSG00000280202.1 RP5-1180D12.1 chr12 3610307 3612003 - TEC KNOWN OTTHUMG00000165347.2 1697 1697 1 ENSG00000222338.1 RNU6-174P chr12 3726222 3726327 - snRNA KNOWN NA 106 106 1 ENSG00000111224.12 PARP11 chr12 3791047 3873448 - protein_coding KNOWN OTTHUMG00000156442.4 82402 6200 56 ENSG00000118976.5 OTUD4P1 chr12 3839459 3842525 + processed_pseudogene KNOWN OTTHUMG00000168119.1 3067 3067 1 ENSG00000229961.1 RP11-71G12.1 chr1 157185388 157187405 + lincRNA NOVEL OTTHUMG00000041327.1 2018 471 2 ENSG00000256862.1 RP11-664D1.1 chr12 3871734 3910338 + antisense NOVEL OTTHUMG00000168120.1 38605 975 6 ENSG00000256969.1 RP11-320N7.2 chr12 4020977 4026658 + lincRNA NOVEL OTTHUMG00000168121.1 5682 588 4 ENSG00000256356.1 HSPA8P5 chr12 4097451 4099519 + processed_pseudogene KNOWN OTTHUMG00000168122.1 2069 2069 1 ENSG00000242444.3 RP11-320N7.1 chr12 4109661 4118132 - transcribed_processed_pseudogene KNOWN OTTHUMG00000157406.3 8472 865 3 ENSG00000256164.1 CCND2-AS1 chr12 4248765 4276184 - antisense NOVEL OTTHUMG00000168157.1 27420 555 2 ENSG00000255920.1 CCND2-AS2 chr12 4252735 4275065 - antisense NOVEL OTTHUMG00000168320.1 22331 495 2 ENSG00000118971.6 CCND2 chr12 4273772 4305350 + protein_coding KNOWN OTTHUMG00000168123.3 31579 7157 12 ENSG00000078237.5 C12orf5 chr12 4321205 4354593 + protein_coding KNOWN OTTHUMG00000168124.2 33389 3023 13 ENSG00000213970.3 RP11-264F23.1 chr12 4324372 4324811 - processed_pseudogene KNOWN OTTHUMG00000157415.1 440 440 1 ENSG00000118972.1 FGF23 chr12 4368227 4379728 - protein_coding KNOWN OTTHUMG00000168241.1 11502 3018 3 ENSG00000271989.1 RP4-736L20.3 chr1 10429881 10430677 - antisense NOVEL OTTHUMG00000185648.1 797 797 1 ENSG00000228239.1 RP11-85G21.1 chr1 157232231 157237136 - lincRNA NOVEL OTTHUMG00000017482.1 4906 399 2 ENSG00000111241.2 FGF6 chr12 4428155 4445614 - protein_coding KNOWN OTTHUMG00000168242.1 17460 1209 7 ENSG00000047621.10 C12orf4 chr12 4487728 4538508 - protein_coding KNOWN OTTHUMG00000168258.4 50781 4939 63 ENSG00000111247.13 RAD51AP1 chr12 4538798 4560048 + protein_coding KNOWN OTTHUMG00000168125.4 21251 2558 101 ENSG00000010219.12 DYRK4 chr12 4562204 4615302 + protein_coding KNOWN OTTHUMG00000168204.5 53099 7054 95 ENSG00000256748.1 RP11-234B24.5 chr12 4601991 4603420 - processed_pseudogene KNOWN OTTHUMG00000168321.1 1430 1430 1 ENSG00000272921.1 RP11-500M8.7 chr12 4604944 4662643 + protein_coding NOVEL OTTHUMG00000186348.1 57700 818 7 ENSG00000111254.6 AKAP3 chr12 4615508 4649047 - protein_coding KNOWN OTTHUMG00000168226.2 33540 3668 24 ENSG00000256799.1 RP11-500M8.6 chr12 4635349 4636140 - processed_pseudogene KNOWN OTTHUMG00000168227.1 792 631 2 ENSG00000256381.1 RP11-500M8.4 chr12 4645496 4648027 + sense_intronic NOVEL OTTHUMG00000168223.1 2532 572 2 ENSG00000139180.9 NDUFA9 chr12 4649095 4694317 + protein_coding KNOWN OTTHUMG00000168224.4 45223 10391 46 ENSG00000271736.1 RP11-85G21.3 chr1 157280716 157283068 + lincRNA NOVEL OTTHUMG00000185718.1 2353 629 2 ENSG00000255639.2 RP11-234B24.6 chr12 4657634 4744581 + protein_coding NOVEL OTTHUMG00000168352.3 86948 1186 12 ENSG00000255474.1 RP11-234B24.2 chr12 4700417 4720102 - lincRNA NOVEL OTTHUMG00000166187.1 19686 1249 4 ENSG00000130035.5 GALNT8 chr12 4720341 4851927 + protein_coding KNOWN OTTHUMG00000166188.4 131587 9208 22 ENSG00000256988.1 RP11-234B24.4 chr12 4806542 4808641 - lincRNA NOVEL OTTHUMG00000168228.1 2100 449 2 ENSG00000151079.7 KCNA6 chr12 4809176 4813412 + protein_coding KNOWN OTTHUMG00000168225.1 4237 4237 1 ENSG00000255608.1 RP3-377H17.2 chr12 4838955 4842675 + sense_intronic NOVEL OTTHUMG00000168229.1 3721 560 2 ENSG00000111262.4 KCNA1 chr12 4909905 4931361 + protein_coding KNOWN OTTHUMG00000044398.2 21457 8361 7 ENSG00000256790.1 RP11-429A20.3 chr12 5018465 5021713 + lincRNA NOVEL OTTHUMG00000168297.1 3249 604 2 ENSG00000256654.2 RP11-429A20.4 chr12 5023682 5025594 + lincRNA NOVEL OTTHUMG00000168298.2 1913 725 2 ENSG00000255996.1 RP11-429A20.2 chr12 5032388 5032941 - processed_pseudogene KNOWN OTTHUMG00000168231.1 554 554 1 ENSG00000237189.1 RP11-85G21.2 chr1 157287703 157288053 - lincRNA NOVEL OTTHUMG00000017483.1 351 156 2 ENSG00000130037.4 KCNA5 chr12 5043989 5046788 + protein_coding KNOWN OTTHUMG00000168232.2 2800 2800 1 ENSG00000256115.4 RP11-319E16.1 chr12 5233997 5243151 - lincRNA NOVEL OTTHUMG00000168644.1 9155 1393 14 ENSG00000256417.1 RP11-1038A11.3 chr12 5290480 5383653 + lincRNA NOVEL OTTHUMG00000168645.1 93174 1604 7 ENSG00000256146.1 RP11-319E16.2 chr12 5315961 5319347 + lincRNA NOVEL OTTHUMG00000168646.1 3387 3387 1 ENSG00000256218.1 RP11-1038A11.2 chr12 5366048 5367774 - lincRNA NOVEL OTTHUMG00000168647.1 1727 1727 1 ENSG00000255983.1 RP11-1038A11.1 chr12 5388589 5406651 + lincRNA NOVEL OTTHUMG00000168648.1 18063 1405 5 ENSG00000185652.10 NTF3 chr12 5432112 5521536 + protein_coding KNOWN OTTHUMG00000168649.2 89425 2919 16 ENSG00000047617.13 ANO2 chr12 5531869 5946232 - protein_coding KNOWN OTTHUMG00000168264.5 414364 6255 116 ENSG00000255973.1 RP11-592H6.3 chr12 5583797 5584085 + processed_pseudogene KNOWN OTTHUMG00000168650.1 289 289 1 ENSG00000110799.12 VWF chr12 5948874 6124770 - protein_coding KNOWN OTTHUMG00000168265.4 175897 10391 84 ENSG00000143297.17 FCRL5 chr1 157513377 157552520 - protein_coding KNOWN OTTHUMG00000017481.1 39144 12419 62 ENSG00000240533.3 RN7SL69P chr12 6095699 6095970 - misc_RNA KNOWN NA 272 272 1 ENSG00000255775.1 RP3-454B23.1 chr12 6155035 6160719 - lincRNA NOVEL OTTHUMG00000168657.1 5685 653 3 ENSG00000010278.10 CD9 chr12 6199715 6238271 + protein_coding KNOWN OTTHUMG00000044400.3 38557 3299 83 ENSG00000202318.1 Y_RNA chr12 6234345 6234455 - misc_RNA NOVEL NA 111 111 1 ENSG00000256103.2 RP1-96H9.5 chr12 6270168 6270425 - processed_pseudogene KNOWN OTTHUMG00000168354.1 258 258 1 ENSG00000008323.14 PLEKHG6 chr12 6310436 6328506 + protein_coding KNOWN OTTHUMG00000168266.1 18071 4260 73 ENSG00000067182.6 TNFRSF1A chr12 6328757 6342114 - protein_coding KNOWN OTTHUMG00000168267.2 13358 4005 91 ENSG00000265388.2 RN7SL391P chr12 6344554 6344837 + misc_RNA KNOWN NA 284 284 1 ENSG00000111319.11 SCNN1A chr12 6346843 6377730 - protein_coding KNOWN OTTHUMG00000168268.1 30888 5876 125 ENSG00000111321.9 LTBR chr12 6375045 6391571 + protein_coding KNOWN OTTHUMG00000168356.2 16527 6280 73 ENSG00000163518.9 FCRL4 chr1 157573749 157598080 - protein_coding KNOWN OTTHUMG00000035488.2 24332 3875 26 ENSG00000256433.2 RP1-102E24.8 chr12 6393905 6396148 + lincRNA NOVEL OTTHUMG00000168357.2 2244 1803 3 ENSG00000213942.3 RP1-102E24.1 chr12 6409637 6410013 - processed_pseudogene KNOWN OTTHUMG00000157418.1 377 377 1 ENSG00000224906.3 RP1-102E24.9 chr12 6438498 6438852 + processed_pseudogene KNOWN OTTHUMG00000169121.1 355 355 1 ENSG00000215039.5 CD27-AS1 chr12 6439001 6451567 - processed_transcript KNOWN OTTHUMG00000168315.2 12567 3411 39 ENSG00000139193.3 CD27 chr12 6444867 6451718 + protein_coding KNOWN OTTHUMG00000168316.1 6852 1410 11 ENSG00000139192.10 TAPBPL chr12 6451690 6466517 + protein_coding KNOWN OTTHUMG00000168317.1 14828 3188 43 ENSG00000139190.15 VAMP1 chr12 6462237 6470987 - protein_coding KNOWN OTTHUMG00000168269.2 8751 3580 33 ENSG00000276718.1 RP1-102E24.10 chr12 6466537 6467135 + antisense NOVEL OTTHUMG00000187110.1 599 599 1 ENSG00000256913.1 RP1-102E24.6 chr12 6477714 6480207 + processed_pseudogene KNOWN OTTHUMG00000168358.1 2494 2494 1 ENSG00000111639.6 MRPL51 chr12 6491886 6493841 - protein_coding KNOWN OTTHUMG00000168512.3 1956 1551 19 ENSG00000236731.1 RP4-801G22.2 chr1 157629939 157630728 - unprocessed_pseudogene KNOWN OTTHUMG00000035489.2 790 505 2 ENSG00000010292.11 NCAPD2 chr12 6493356 6531955 + protein_coding KNOWN OTTHUMG00000168513.1 38600 6487 123 ENSG00000239002.3 SCARNA10 chr12 6510222 6510551 + snoRNA KNOWN NA 330 330 1 ENSG00000276232.1 SCARNA10 chr12 6510275 6510522 + sense_intronic KNOWN OTTHUMG00000169160.1 248 248 1 ENSG00000255966.1 RP5-940J5.3 chr12 6532290 6533498 - antisense NOVEL OTTHUMG00000169161.1 1209 477 2 ENSG00000111640.13 GAPDH chr12 6533927 6538374 + protein_coding KNOWN OTTHUMG00000137379.1 4448 2981 79 ENSG00000269968.1 RP5-940J5.9 chr12 6537794 6538370 - antisense NOVEL OTTHUMG00000183895.1 577 422 2 ENSG00000010295.18 IFFO1 chr12 6538375 6556083 - protein_coding KNOWN OTTHUMG00000141264.3 17709 5203 108 ENSG00000245667.2 RP5-940J5.8 chr12 6543504 6544931 + antisense NOVEL OTTHUMG00000169162.1 1428 560 2 ENSG00000111641.9 NOP2 chr12 6556863 6568691 - protein_coding KNOWN OTTHUMG00000169163.1 11829 4687 215 ENSG00000111642.13 CHD4 chr12 6570083 6607476 - protein_coding KNOWN OTTHUMG00000169164.1 37394 7474 160 ENSG00000233712.1 RP4-801G22.3 chr1 157636300 157640301 - unprocessed_pseudogene KNOWN OTTHUMG00000035486.2 4002 552 2 ENSG00000247853.2 RP5-940J5.6 chr12 6578622 6584739 + antisense NOVEL OTTHUMG00000169165.1 6118 2196 2 ENSG00000251898.1 SCARNA11 chr12 6581474 6581609 - scaRNA KNOWN NA 136 136 1 ENSG00000184574.8 LPAR5 chr12 6618835 6636447 - protein_coding KNOWN OTTHUMG00000168713.1 17613 3258 7 ENSG00000111644.6 ACRBP chr12 6638075 6647460 - protein_coding KNOWN OTTHUMG00000168715.1 9386 2843 47 ENSG00000111653.18 ING4 chr12 6650280 6663148 - protein_coding KNOWN OTTHUMG00000141274.5 12869 2736 120 ENSG00000219410.5 RP4-761J14.8 chr12 6663260 6672069 + antisense NOVEL OTTHUMG00000169194.2 8810 2399 6 ENSG00000126746.16 ZNF384 chr12 6666477 6689572 - protein_coding KNOWN OTTHUMG00000168716.4 23096 5181 93 ENSG00000139200.12 PIANP chr12 6693792 6700800 - protein_coding KNOWN OTTHUMG00000168664.2 7009 3266 25 ENSG00000252186.1 RNU6-781P chr12 6709452 6709552 + snRNA KNOWN NA 101 101 1 ENSG00000280974.1 Metazoa_SRP chr12 6722041 6722287 + misc_RNA NOVEL NA 247 247 1 ENSG00000160856.19 FCRL3 chr1 157674321 157700857 - protein_coding KNOWN OTTHUMG00000019400.7 26537 6538 133 ENSG00000270068.1 RP4-761J14.9 chr12 6723233 6723687 + antisense NOVEL OTTHUMG00000183940.1 455 455 1 ENSG00000111652.8 COPS7A chr12 6723741 6731875 + protein_coding KNOWN OTTHUMG00000169182.2 8135 3113 130 ENSG00000269892.1 RP4-761J14.10 chr12 6742985 6743641 + lincRNA NOVEL OTTHUMG00000183941.1 657 657 1 ENSG00000089693.9 MLF2 chr12 6747996 6767475 - protein_coding KNOWN OTTHUMG00000168717.4 19480 3781 65 ENSG00000159335.14 PTMS chr12 6765516 6770952 + protein_coding KNOWN OTTHUMG00000169196.3 5437 1475 33 ENSG00000089692.7 LAG3 chr12 6772512 6778455 + protein_coding KNOWN OTTHUMG00000169197.1 5944 3056 21 ENSG00000244532.1 RN7SL380P chr12 6783854 6784161 - misc_RNA KNOWN NA 308 308 1 ENSG00000010610.8 CD4 chr12 6786858 6820808 + protein_coding KNOWN OTTHUMG00000168514.1 33951 4583 58 ENSG00000250510.6 GPR162 chr12 6821545 6829972 + protein_coding KNOWN OTTHUMG00000168368.3 8428 3295 25 ENSG00000110811.18 P3H3 chr12 6828410 6839851 + protein_coding KNOWN OTTHUMG00000168516.5 11442 4601 87 ENSG00000227217.1 RP11-367J7.3 chr1 157691762 157696459 + antisense NOVEL OTTHUMG00000019395.1 4698 758 2 ENSG00000111664.9 GNB3 chr12 6839954 6847393 + protein_coding KNOWN OTTHUMG00000168517.3 7440 3437 65 ENSG00000111665.10 CDCA3 chr12 6844793 6852066 - protein_coding KNOWN OTTHUMG00000169014.2 7274 5653 49 ENSG00000111667.12 USP5 chr12 6852128 6866632 + protein_coding KNOWN OTTHUMG00000169233.1 14505 3738 73 ENSG00000111669.13 TPI1 chr12 6867119 6870948 + protein_coding KNOWN OTTHUMG00000133767.2 3830 2700 53 ENSG00000111671.8 SPSB2 chr12 6870935 6889358 - protein_coding KNOWN OTTHUMG00000156665.2 18424 2452 16 ENSG00000240370.5 U47924.6 chr12 6873389 6884741 + transcribed_processed_pseudogene KNOWN OTTHUMG00000156667.2 11353 1783 13 ENSG00000010626.13 LRRC23 chr12 6873569 6914243 + protein_coding KNOWN OTTHUMG00000156668.3 40675 3054 79 ENSG00000248593.3 DSTNP2 chr12 6884682 6885786 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156666.3 1105 1105 3 ENSG00000275703.1 U47924.32 chr12 6899752 6900212 + lincRNA NOVEL OTTHUMG00000187114.1 461 461 1 ENSG00000111674.7 ENO2 chr12 6913745 6923698 + protein_coding KNOWN OTTHUMG00000168967.2 9954 4281 91 ENSG00000231700.3 RP11-367J7.4 chr1 157709086 157709643 + processed_pseudogene KNOWN OTTHUMG00000019396.2 558 558 1 ENSG00000111676.13 ATN1 chr12 6924463 6942321 + protein_coding KNOWN OTTHUMG00000169015.2 17859 4762 25 ENSG00000111678.9 C12orf57 chr12 6942978 6946003 + protein_coding KNOWN OTTHUMG00000169017.2 3026 1806 21 ENSG00000272173.1 U47924.31 chr12 6943508 6944604 - antisense NOVEL OTTHUMG00000185702.1 1097 1097 1 ENSG00000238923.1 RNU7-1 chr12 6943816 6943878 + snRNA KNOWN NA 63 63 1 ENSG00000111679.15 PTPN6 chr12 6946468 6961316 + protein_coding KNOWN OTTHUMG00000168518.2 14849 5009 148 ENSG00000257084.1 U47924.27 chr12 6963246 6964447 + lincRNA NOVEL OTTHUMG00000169234.1 1202 350 2 ENSG00000207713.2 MIR200C chr12 6963672 6963780 + miRNA KNOWN NA 109 109 1 ENSG00000207708.1 MIR141 chr12 6964097 6964191 + miRNA KNOWN NA 95 95 1 ENSG00000271969.1 U47924.29 chr12 6964949 6965382 + antisense NOVEL OTTHUMG00000185704.1 434 434 1 ENSG00000215021.7 PHB2 chr12 6965327 6970825 - protein_coding KNOWN OTTHUMG00000168519.3 5499 2499 82 ENSG00000231709.1 RP5-857K21.1 chr1 585989 588453 - lincRNA NOVEL OTTHUMG00000002261.1 2465 842 3 ENSG00000251503.6 APITD1-CORT chr1 10430102 10452153 + protein_coding KNOWN OTTHUMG00000162436.2 22052 2301 26 ENSG00000232366.1 VDAC1P9 chr1 157724180 157725020 - processed_pseudogene KNOWN OTTHUMG00000019397.1 841 841 1 ENSG00000238795.1 SCARNA12 chr12 6967337 6967606 - snoRNA KNOWN NA 270 270 1 ENSG00000126749.13 EMG1 chr12 6970893 6979941 + protein_coding KNOWN OTTHUMG00000188247.2 9049 5600 17 ENSG00000268439.4 RP3-461F17.3 chr12 6970921 6997428 + protein_coding KNOWN OTTHUMG00000168968.4 26508 1292 16 ENSG00000111684.9 LPCAT3 chr12 6976186 7018510 - protein_coding KNOWN OTTHUMG00000168970.2 42325 4725 76 ENSG00000182326.13 C1S chr12 6988259 7071032 + protein_coding KNOWN OTTHUMG00000150305.3 82774 6462 128 ENSG00000239701.1 RP3-461F17.1 chr12 7032108 7032398 + processed_pseudogene KNOWN OTTHUMG00000157428.1 291 291 1 ENSG00000257078.1 RP3-461F17.2 chr12 7041156 7041641 - processed_pseudogene KNOWN OTTHUMG00000169235.1 486 486 1 ENSG00000159403.14 C1R chr12 7080209 7092607 - protein_coding KNOWN OTTHUMG00000168149.5 12399 5672 78 ENSG00000139178.9 C1RL chr12 7089587 7109273 - protein_coding KNOWN OTTHUMG00000168144.2 19687 5014 49 ENSG00000205885.6 C1RL-AS1 chr12 7108052 7122501 + antisense NOVEL OTTHUMG00000168164.1 14450 6094 27 ENSG00000132704.14 FCRL2 chr1 157745733 157777132 - protein_coding KNOWN OTTHUMG00000019399.2 31400 5058 33 ENSG00000276144.1 ABC12-49244600F4.4 chr12 7115736 7116486 - lincRNA NOVEL OTTHUMG00000187115.1 751 751 1 ENSG00000200345.2 RNU6-485P chr12 7118785 7118891 + snRNA KNOWN NA 107 107 1 ENSG00000139194.6 RBP5 chr12 7123684 7128942 - protein_coding KNOWN OTTHUMG00000168165.1 5259 1369 13 ENSG00000256967.1 RP11-273B20.1 chr12 7129079 7131198 - antisense NOVEL OTTHUMG00000168166.1 2120 1179 5 ENSG00000139182.12 CLSTN3 chr12 7129698 7158945 + protein_coding KNOWN OTTHUMG00000168167.2 29248 6865 88 ENSG00000255572.1 RP11-273B20.3 chr12 7166674 7189069 - antisense NOVEL OTTHUMG00000168174.1 22396 651 5 ENSG00000139197.9 PEX5 chr12 7188685 7218574 + protein_coding KNOWN OTTHUMG00000168175.4 29890 5488 174 ENSG00000256480.1 RP11-185H22.1 chr12 7237432 7240986 + processed_pseudogene KNOWN OTTHUMG00000168324.1 3555 238 2 ENSG00000215009.5 ACSM4 chr12 7304284 7328724 + protein_coding KNOWN OTTHUMG00000154975.3 24441 2477 16 ENSG00000177675.7 CD163L1 chr12 7346685 7479897 - protein_coding KNOWN OTTHUMG00000168325.2 133213 5690 68 ENSG00000163534.13 FCRL1 chr1 157794403 157820105 - protein_coding KNOWN OTTHUMG00000019398.3 25703 3935 62 ENSG00000255836.1 RP11-157G21.2 chr12 7438780 7439990 - processed_pseudogene KNOWN OTTHUMG00000168326.1 1211 1211 1 ENSG00000177575.11 CD163 chr12 7470813 7503893 - protein_coding KNOWN OTTHUMG00000168353.2 33081 5813 100 ENSG00000235868.3 GAPDHP31 chr12 7566369 7567382 + processed_pseudogene KNOWN OTTHUMG00000160000.1 1014 1014 1 ENSG00000256331.1 NIFKP3 chr12 7604350 7605214 - processed_pseudogene KNOWN OTTHUMG00000168431.1 865 865 1 ENSG00000255977.1 RP11-444J21.2 chr12 7606834 7607331 + processed_pseudogene KNOWN OTTHUMG00000168432.1 498 498 1 ENSG00000111701.6 APOBEC1 chr12 7649400 7665903 - protein_coding KNOWN OTTHUMG00000141288.3 16504 889 9 ENSG00000184344.3 GDF3 chr12 7689782 7695776 - protein_coding KNOWN OTTHUMG00000168433.1 5995 1239 2 ENSG00000187569.2 DPPA3 chr12 7711454 7717559 + protein_coding KNOWN OTTHUMG00000168434.1 6106 1079 4 ENSG00000198178.9 CLEC4C chr12 7729415 7751605 - protein_coding KNOWN OTTHUMG00000168441.1 22191 1551 33 ENSG00000205857.1 NANOGNB chr12 7765216 7774121 + protein_coding KNOWN OTTHUMG00000165107.1 8906 907 4 ENSG00000073754.5 CD5L chr1 157830914 157898256 - protein_coding KNOWN OTTHUMG00000022440.1 67343 2456 10 ENSG00000201549.1 Y_RNA chr12 7784403 7784511 - misc_RNA NOVEL NA 109 109 1 ENSG00000111704.9 NANOG chr12 7787794 7799141 + protein_coding KNOWN OTTHUMG00000166019.3 11348 5393 16 ENSG00000199912.1 Y_RNA chr12 7800361 7800467 - misc_RNA NOVEL NA 107 107 1 ENSG00000173262.10 SLC2A14 chr12 7812512 7891148 - protein_coding KNOWN OTTHUMG00000168463.3 78637 5575 153 ENSG00000201663.1 Y_RNA chr12 7850717 7850818 - misc_RNA NOVEL NA 102 102 1 ENSG00000278459.1 Metazoa_SRP chr12 7856169 7856471 + misc_RNA NOVEL NA 303 303 1 ENSG00000241828.2 RP11-277J24.1 chr12 7860437 7860764 + processed_pseudogene KNOWN OTTHUMG00000157430.2 328 328 1 ENSG00000255885.1 RP11-815D16.1 chr12 7870852 7871370 + processed_pseudogene KNOWN OTTHUMG00000168460.1 519 519 1 ENSG00000176654.11 NANOGP1 chr12 7892576 7900140 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000187943.1 7565 1982 8 ENSG00000255356.2 RP11-277E18.2 chr12 7896608 7896956 - processed_pseudogene KNOWN OTTHUMG00000166020.3 349 349 1 ENSG00000227425.1 MRPS21P2 chr1 157861197 157861460 + processed_pseudogene KNOWN OTTHUMG00000022446.1 264 264 1 ENSG00000059804.14 SLC2A3 chr12 7919230 7936275 - protein_coding KNOWN OTTHUMG00000133685.2 17046 6159 48 ENSG00000206636.1 Y_RNA chr12 7976259 7976360 + misc_RNA NOVEL NA 102 102 1 ENSG00000240739.1 RP11-69M1.1 chr12 7994770 7995084 - unprocessed_pseudogene KNOWN OTTHUMG00000157435.1 315 315 1 ENSG00000255964.1 RP11-69M1.3 chr12 8015024 8016406 + processed_pseudogene KNOWN OTTHUMG00000168524.1 1383 1069 2 ENSG00000255581.1 RP11-69M1.4 chr12 8017201 8017860 - processed_pseudogene KNOWN OTTHUMG00000168525.1 660 660 1 ENSG00000065970.7 FOXJ2 chr12 8032703 8055503 + protein_coding KNOWN OTTHUMG00000168526.1 22801 6296 25 ENSG00000171860.4 C3AR1 chr12 8058302 8066471 - protein_coding KNOWN OTTHUMG00000168569.1 8170 2145 4 ENSG00000279865.1 RP11-69M1.6 chr12 8080381 8082163 - TEC KNOWN OTTHUMG00000168570.1 1783 1783 1 ENSG00000089818.15 NECAP1 chr12 8082211 8097771 + protein_coding KNOWN OTTHUMG00000168568.1 15561 4155 43 ENSG00000111729.11 CLEC4A chr12 8123632 8138607 + protein_coding KNOWN OTTHUMG00000168571.2 14976 1281 24 ENSG00000236957.6 RP11-451O13.1 chr1 157925065 157949071 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000022437.2 24007 2140 9 ENSG00000235602.5 POU5F1P3 chr12 8133772 8134849 - processed_pseudogene KNOWN OTTHUMG00000168634.3 1078 1078 1 ENSG00000196946.8 ZNF705A chr12 8138137 8188537 + protein_coding KNOWN OTTHUMG00000168635.2 50401 3765 25 ENSG00000256171.1 GCSHP4 chr12 8141168 8142697 - processed_pseudogene KNOWN OTTHUMG00000168636.1 1530 439 2 ENSG00000226711.5 FAM66C chr12 8180209 8216151 + antisense KNOWN OTTHUMG00000168638.1 35943 4661 45 ENSG00000244050.2 RP11-266K4.1 chr12 8199599 8218911 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000158674.3 19313 615 5 ENSG00000276417.1 RP11-266K4.13 chr12 8205984 8207397 + lincRNA NOVEL OTTHUMG00000187118.1 1414 1414 1 ENSG00000275367.1 RP11-266K4.14 chr12 8217758 8221115 + lincRNA NOVEL OTTHUMG00000187119.1 3358 3358 1 ENSG00000171847.9 FAM90A1 chr12 8221260 8227618 - protein_coding KNOWN OTTHUMG00000168641.1 6359 2538 17 ENSG00000254016.2 ALG1L10P chr12 8227734 8231764 + unprocessed_pseudogene KNOWN OTTHUMG00000168660.1 4031 424 4 ENSG00000164845.15 FAM86FP chr12 8232512 8242948 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000168639.1 10437 994 15 ENSG00000183853.16 KIRREL chr1 157993273 158100262 + protein_coding KNOWN OTTHUMG00000022438.5 106990 7872 52 ENSG00000215241.3 RP11-266K4.9 chr12 8235415 8242564 + lincRNA NOVEL OTTHUMG00000168640.1 7150 1397 7 ENSG00000256589.1 ENPP7P5 chr12 8254527 8308849 - unprocessed_pseudogene KNOWN OTTHUMG00000168662.1 54323 1013 3 ENSG00000226091.6 LINC00937 chr12 8295986 8396803 - lincRNA NOVEL OTTHUMG00000168663.1 100818 5663 25 ENSG00000256552.2 RP11-113C12.4 chr12 8320381 8369555 + transcribed_processed_pseudogene KNOWN OTTHUMG00000168667.2 49175 620 3 ENSG00000256101.4 RP11-90D4.3 chr12 8321876 8329614 + lincRNA NOVEL OTTHUMG00000168666.1 7739 851 6 ENSG00000277952.1 RP11-90D4.4 chr12 8340182 8340397 + processed_pseudogene KNOWN OTTHUMG00000187120.1 216 216 1 ENSG00000242661.1 RPS3AP43 chr12 8359054 8359834 - processed_pseudogene KNOWN OTTHUMG00000157447.1 781 781 1 ENSG00000221104.1 AC092865.1 chr12 8366686 8366831 + miRNA NOVEL NA 146 146 1 ENSG00000256136.1 RP11-113C12.8 chr12 8406833 8407195 - processed_pseudogene KNOWN OTTHUMG00000168668.1 363 363 1 ENSG00000238152.2 OR7E140P chr12 8414780 8415805 - unprocessed_pseudogene KNOWN OTTHUMG00000168669.1 1026 1026 1 ENSG00000226520.1 KIRREL-IT1 chr1 158025550 158031166 + sense_intronic NOVEL OTTHUMG00000035615.1 5617 587 2 ENSG00000266218.1 AC092865.2 chr12 8426600 8426687 - miRNA NOVEL NA 88 88 1 ENSG00000214487.3 OR7E148P chr12 8427640 8428610 - unprocessed_pseudogene KNOWN OTTHUMG00000168670.1 971 971 1 ENSG00000177586.6 OR7E149P chr12 8437403 8438425 - unprocessed_pseudogene KNOWN OTTHUMG00000168671.1 1023 1023 1 ENSG00000205846.3 CLEC6A chr12 8455926 8478330 + protein_coding KNOWN OTTHUMG00000168672.1 22405 1682 6 ENSG00000243830.2 RP11-113C12.2 chr12 8460618 8461232 + processed_pseudogene KNOWN OTTHUMG00000157451.2 615 615 1 ENSG00000201780.1 RNU6-275P chr12 8484746 8484852 + snRNA KNOWN NA 107 107 1 ENSG00000166527.6 CLEC4D chr12 8509475 8522366 + protein_coding KNOWN OTTHUMG00000168674.1 12892 2013 12 ENSG00000246115.3 RP11-561P12.2 chr12 8512374 8512726 - processed_pseudogene KNOWN OTTHUMG00000168673.1 353 353 1 ENSG00000166523.6 CLEC4E chr12 8533305 8540963 - protein_coding KNOWN OTTHUMG00000168675.1 7659 2422 26 ENSG00000255801.1 RP11-561P12.5 chr12 8548361 8567613 - lincRNA NOVEL OTTHUMG00000168702.1 19253 562 3 ENSG00000231666.4 RP11-404O13.1 chr1 158132044 158140639 - lincRNA NOVEL OTTHUMG00000022441.1 8596 834 7 ENSG00000238943.1 Y_RNA chr12 8592476 8592585 + misc_RNA NOVEL NA 110 110 1 ENSG00000252727.1 SCARNA11 chr12 8597509 8597640 + scaRNA NOVEL NA 132 132 1 ENSG00000111732.9 AICDA chr12 8602166 8612871 - protein_coding KNOWN OTTHUMG00000168676.1 10706 3115 23 ENSG00000280345.1 RP11-438L7.1 chr12 8631545 8632259 - TEC KNOWN OTTHUMG00000168677.1 715 715 1 ENSG00000255967.1 RP11-438L7.3 chr12 8634367 8637608 + processed_pseudogene KNOWN OTTHUMG00000168721.1 3242 2285 2 ENSG00000197614.9 MFAP5 chr12 8637346 8662888 - protein_coding KNOWN OTTHUMG00000168703.2 25543 3876 122 ENSG00000255829.1 RP11-20D14.3 chr12 8664011 8669011 + antisense NOVEL OTTHUMG00000168218.1 5001 488 4 ENSG00000256004.1 RP11-20D14.4 chr12 8678773 8679670 + processed_pseudogene KNOWN OTTHUMG00000168219.1 898 572 2 ENSG00000166532.14 RIMKLB chr12 8681600 8783095 + protein_coding KNOWN OTTHUMG00000168197.2 101496 8619 66 ENSG00000244131.2 RPSAP51 chr12 8742428 8743072 + processed_pseudogene KNOWN OTTHUMG00000157454.2 645 645 1 ENSG00000227295.2 ELL2P1 chr1 158175850 158177755 - processed_pseudogene KNOWN OTTHUMG00000022442.1 1906 1906 1 ENSG00000256661.1 A2ML1-AS1 chr12 8776219 8830947 - antisense NOVEL OTTHUMG00000168273.1 54729 452 2 ENSG00000249790.2 RP11-20D14.6 chr12 8788257 8795789 + lincRNA NOVEL OTTHUMG00000168221.2 7533 2279 7 ENSG00000256904.1 A2ML1-AS2 chr12 8819816 8820713 - antisense NOVEL OTTHUMG00000168274.1 898 386 2 ENSG00000166535.18 A2ML1 chr12 8822472 8887001 + protein_coding KNOWN OTTHUMG00000128499.7 64530 7303 112 ENSG00000111752.9 PHC1 chr12 8913896 8941467 + protein_coding KNOWN OTTHUMG00000168275.1 27572 6090 114 ENSG00000003056.6 M6PR chr12 8940363 8949955 - protein_coding KNOWN OTTHUMG00000168276.1 9593 3777 50 ENSG00000139187.8 KLRG1 chr12 8950044 9010760 + protein_coding KNOWN OTTHUMG00000168277.1 60717 2598 31 ENSG00000257105.1 RP11-259O18.4 chr12 8987175 8996566 - antisense NOVEL OTTHUMG00000168285.1 9392 496 3 ENSG00000213049.3 HNRNPA1P34 chr12 9027532 9029089 - processed_pseudogene KNOWN OTTHUMG00000168286.1 1558 950 2 ENSG00000255776.1 RP11-436I9.3 chr12 9036344 9037244 + processed_pseudogene KNOWN OTTHUMG00000168287.1 901 901 1 ENSG00000175279.20 APITD1 chr1 10430443 10442809 + protein_coding KNOWN OTTHUMG00000059085.8 12367 1739 17 ENSG00000158473.6 CD1D chr1 158179947 158184896 + protein_coding KNOWN OTTHUMG00000022436.1 4950 2253 7 ENSG00000214851.4 LINC00612 chr12 9055586 9065070 - processed_transcript KNOWN OTTHUMG00000168288.1 9485 2213 3 ENSG00000245105.2 A2M-AS1 chr12 9065177 9068060 + antisense NOVEL OTTHUMG00000168289.2 2884 2192 3 ENSG00000175899.13 A2M chr12 9067664 9116229 - protein_coding KNOWN OTTHUMG00000150267.7 48566 6384 87 ENSG00000256937.1 KRT17P8 chr12 9127783 9128645 + processed_pseudogene KNOWN OTTHUMG00000168327.1 863 863 1 ENSG00000211542.1 AC007436.1 chr12 9127871 9127985 + miRNA NOVEL NA 115 115 1 ENSG00000256720.1 RP11-436I9.6 chr12 9135084 9135591 + processed_pseudogene KNOWN OTTHUMG00000168328.1 508 508 1 ENSG00000126838.8 PZP chr12 9148840 9208370 - protein_coding KNOWN OTTHUMG00000154915.2 59531 6227 96 ENSG00000256817.1 TPT1P12 chr12 9155881 9156372 - processed_pseudogene KNOWN OTTHUMG00000168329.1 492 492 1 ENSG00000256069.6 A2MP1 chr12 9228533 9275817 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000168334.3 47285 4657 52 ENSG00000231503.4 PTMAP4 chr12 9239986 9240331 - processed_pseudogene KNOWN OTTHUMG00000168331.1 346 346 1 ENSG00000229914.1 RP11-404O13.4 chr1 158195633 158196131 - processed_pseudogene KNOWN OTTHUMG00000022443.1 499 499 1 ENSG00000237248.4 LINC00987 chr12 9240003 9243052 + lincRNA NOVEL OTTHUMG00000168332.2 3050 2472 2 ENSG00000256427.1 RP11-118B22.4 chr12 9246497 9257960 + lincRNA NOVEL OTTHUMG00000168333.1 11464 224 3 ENSG00000111788.10 RP11-22B23.1 chr12 9277235 9313241 + unprocessed_pseudogene KNOWN OTTHUMG00000168367.4 36007 3158 29 ENSG00000212440.1 SNORA75 chr12 9286673 9286822 - snoRNA NOVEL NA 150 150 1 ENSG00000255753.1 RP11-22B23.2 chr12 9314402 9316173 - processed_pseudogene KNOWN OTTHUMG00000168577.1 1772 586 5 ENSG00000260423.1 RP13-735L24.1 chr12 9367464 9397617 + lincRNA NOVEL OTTHUMG00000172909.2 30154 4388 4 ENSG00000256673.1 RP11-599J14.2 chr12 9398355 9414851 - unprocessed_pseudogene KNOWN OTTHUMG00000168578.2 16497 400 4 ENSG00000278635.1 CTD-2318O12.1 chr12 9415641 9416718 + unprocessed_pseudogene KNOWN OTTHUMG00000187882.2 1078 482 4 ENSG00000214826.5 DDX12P chr12 9418673 9448229 - unprocessed_pseudogene KNOWN OTTHUMG00000168579.2 29557 2947 27 ENSG00000212432.1 SNORA75 chr12 9445058 9445205 + snoRNA NOVEL NA 148 148 1 ENSG00000176320.2 RP11-404O13.5 chr1 158197922 158203877 - lincRNA NOVEL OTTHUMG00000022444.1 5956 1999 2 ENSG00000214776.8 RP11-726G1.1 chr12 9467552 9576275 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000164997.3 108724 10244 35 ENSG00000256975.1 RP11-525E9.1 chr12 9506347 9508440 - processed_pseudogene KNOWN OTTHUMG00000168580.1 2094 2042 2 ENSG00000111796.3 KLRB1 chr12 9594551 9607886 - protein_coding KNOWN OTTHUMG00000168581.1 13336 1448 6 ENSG00000212345.1 RNU6-700P chr12 9624122 9624228 - snRNA KNOWN NA 107 107 1 ENSG00000256594.6 RP11-705C15.2 chr12 9633419 9658412 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000186391.2 24994 3129 28 ENSG00000233719.3 GOT2P3 chr12 9641802 9643007 + transcribed_processed_pseudogene KNOWN OTTHUMG00000168361.1 1206 1206 1 ENSG00000272917.1 RP11-705C15.5 chr12 9642872 9657070 + processed_transcript NOVEL OTTHUMG00000168360.4 14199 615 4 ENSG00000256442.1 RP11-705C15.4 chr12 9647014 9648009 - antisense NOVEL OTTHUMG00000168457.1 996 532 2 ENSG00000257027.1 RP11-705C15.3 chr12 9658567 9662085 + sense_intronic NOVEL OTTHUMG00000168442.1 3519 2508 2 ENSG00000069493.13 CLEC2D chr12 9664969 9699555 + protein_coding KNOWN OTTHUMG00000168369.7 34587 6957 70 ENSG00000158477.6 CD1A chr1 158254137 158258269 + protein_coding KNOWN OTTHUMG00000017512.2 4133 2096 6 ENSG00000213443.2 RP11-75L1.2 chr12 9695384 9696227 + processed_pseudogene KNOWN OTTHUMG00000168370.1 844 844 1 ENSG00000256582.1 RP11-75L1.1 chr12 9704077 9709350 + lincRNA NOVEL OTTHUMG00000168371.1 5274 560 2 ENSG00000184293.6 CLECL1 chr12 9715860 9733299 - protein_coding KNOWN OTTHUMG00000168459.2 17440 1721 11 ENSG00000110848.7 CD69 chr12 9752486 9760901 - protein_coding KNOWN OTTHUMG00000168481.4 8416 2832 14 ENSG00000256912.1 RP11-75L1.6 chr12 9817350 9818025 - processed_pseudogene KNOWN OTTHUMG00000168482.1 676 395 2 ENSG00000150045.10 KLRF1 chr12 9827481 9845007 + protein_coding KNOWN OTTHUMG00000168391.5 17527 1260 35 ENSG00000110852.4 CLEC2B chr12 9852984 9870136 - protein_coding KNOWN OTTHUMG00000168483.1 17153 2638 12 ENSG00000255882.1 RP11-290C10.1 chr12 9867027 9869808 + antisense NOVEL OTTHUMG00000168395.1 2782 719 2 ENSG00000256797.1 KLRF2 chr12 9881489 9895833 + protein_coding KNOWN OTTHUMG00000187141.1 14345 731 6 ENSG00000188393.7 CLEC2A chr12 9898673 9932381 - protein_coding KNOWN OTTHUMG00000140393.2 33709 1220 10 ENSG00000230942.1 HMGN1P5 chr1 158266753 158267320 - processed_pseudogene KNOWN OTTHUMG00000017511.1 568 263 2 ENSG00000225231.1 AC091814.2 chr12 9936579 9943495 - lincRNA NOVEL OTTHUMG00000140394.1 6917 979 5 ENSG00000231560.1 AC091814.3 chr12 9948137 9953336 - lincRNA NOVEL OTTHUMG00000150192.1 5200 3956 3 ENSG00000172322.12 CLEC12A chr12 9951316 9995694 + protein_coding KNOWN OTTHUMG00000168396.5 44379 3250 39 ENSG00000165682.13 CLEC1B chr12 9985642 10013424 - protein_coding KNOWN OTTHUMG00000168502.1 27783 3670 22 ENSG00000256660.4 CLEC12B chr12 10010627 10018619 + protein_coding KNOWN OTTHUMG00000168397.3 7993 3667 24 ENSG00000256803.1 RP11-133L14.5 chr12 10015240 10030606 - antisense NOVEL OTTHUMG00000168503.1 15367 782 3 ENSG00000197992.5 CLEC9A chr12 10030677 10066027 + protein_coding KNOWN OTTHUMG00000168398.3 35351 2854 14 ENSG00000256626.1 RP11-133L14.2 chr12 10040848 10045711 + unprocessed_pseudogene KNOWN OTTHUMG00000168399.1 4864 609 4 ENSG00000150048.9 CLEC1A chr12 10069554 10111627 - protein_coding KNOWN OTTHUMG00000168504.2 42074 3169 22 ENSG00000223042.1 RN7SKP161 chr12 10084186 10084490 + misc_RNA KNOWN NA 305 305 1 ENSG00000158481.11 CD1C chr1 158289786 158293630 + protein_coding KNOWN OTTHUMG00000017514.3 3845 1435 10 ENSG00000255734.1 HNRNPABP1 chr12 10111738 10112471 + processed_pseudogene KNOWN OTTHUMG00000168406.1 734 734 1 ENSG00000172243.16 CLEC7A chr12 10116777 10130258 - protein_coding KNOWN OTTHUMG00000133597.4 13482 4190 65 ENSG00000173391.7 OLR1 chr12 10158301 10172138 - protein_coding KNOWN OTTHUMG00000168527.3 13838 3057 46 ENSG00000165685.7 TMEM52B chr12 10170542 10191801 + protein_coding KNOWN OTTHUMG00000168410.1 21260 3489 20 ENSG00000139112.9 GABARAPL1 chr12 10212458 10223130 + protein_coding KNOWN OTTHUMG00000168411.8 10673 4086 78 ENSG00000255958.1 RP11-656E20.5 chr12 10214161 10214761 - antisense NOVEL OTTHUMG00000168529.1 601 329 2 ENSG00000134539.15 KLRD1 chr12 10226058 10329600 + protein_coding KNOWN OTTHUMG00000168419.7 103543 17404 58 ENSG00000256288.1 RP11-277P12.10 chr12 10332861 10338292 - lincRNA NOVEL OTTHUMG00000168572.1 5432 649 3 ENSG00000256155.1 RP11-277P12.9 chr12 10358464 10361045 - lincRNA NOVEL OTTHUMG00000168573.1 2582 562 2 ENSG00000245648.1 RP11-277P12.20 chr12 10363769 10398506 + antisense NOVEL OTTHUMG00000168533.4 34738 2830 4 ENSG00000158485.9 CD1B chr1 158327951 158331531 - protein_coding KNOWN OTTHUMG00000017513.2 3581 1395 11 ENSG00000213809.7 KLRK1 chr12 10372353 10391874 - protein_coding KNOWN OTTHUMG00000168574.2 19522 3030 34 ENSG00000255819.5 KLRC4-KLRK1 chr12 10372353 10410146 - protein_coding KNOWN OTTHUMG00000168531.5 37794 2592 154 ENSG00000183542.5 KLRC4 chr12 10407382 10409757 - protein_coding KNOWN OTTHUMG00000168575.2 2376 930 4 ENSG00000255641.1 RP11-277P12.6 chr12 10412312 10436001 - protein_coding NOVEL OTTHUMG00000168576.1 23690 998 7 ENSG00000205810.7 KLRC3 chr12 10412312 10420595 - protein_coding KNOWN OTTHUMG00000167149.1 8284 1148 13 ENSG00000205809.8 KLRC2 chr12 10426854 10442300 - protein_coding KNOWN OTTHUMG00000168532.3 15447 1499 33 ENSG00000134545.12 KLRC1 chr12 10442264 10454685 - protein_coding KNOWN OTTHUMG00000168584.1 12422 2698 41 ENSG00000180574.3 EIF2S3L chr12 10505602 10523135 + protein_coding KNOWN OTTHUMG00000168585.3 17534 2423 3 ENSG00000257016.1 SLC25A39P2 chr12 10551266 10551535 - processed_pseudogene KNOWN OTTHUMG00000168534.1 270 270 1 ENSG00000256039.1 RP11-291B21.2 chr12 10553363 10558049 + lincRNA NOVEL OTTHUMG00000168797.1 4687 868 2 ENSG00000158488.14 CD1E chr1 158353696 158357553 + protein_coding KNOWN OTTHUMG00000017515.3 3858 2203 69 ENSG00000256667.5 KLRAP1 chr12 10588063 10599669 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000160127.3 11607 2457 18 ENSG00000111196.8 MAGOHB chr12 10604190 10613623 - protein_coding KNOWN OTTHUMG00000168407.2 9434 4856 49 ENSG00000060140.7 STYK1 chr12 10618939 10674318 - protein_coding KNOWN OTTHUMG00000168408.2 55380 3424 31 ENSG00000060138.11 YBX3 chr12 10699089 10723312 - protein_coding KNOWN OTTHUMG00000168409.4 24224 8610 93 ENSG00000256888.4 RP13-81N3.2 chr12 10750234 10777444 + lincRNA NOVEL OTTHUMG00000168488.1 27211 752 14 ENSG00000235930.3 HSPE1P12 chr12 10770305 10770605 + processed_pseudogene KNOWN OTTHUMG00000168489.2 301 301 1 ENSG00000121377.2 TAS2R7 chr12 10801532 10802627 - protein_coding KNOWN OTTHUMG00000168505.1 1096 1096 1 ENSG00000121314.2 TAS2R8 chr12 10806051 10807293 - protein_coding KNOWN OTTHUMG00000168506.1 1243 1243 1 ENSG00000121381.3 TAS2R9 chr12 10809137 10810168 - protein_coding KNOWN OTTHUMG00000168507.1 1032 1032 1 ENSG00000231887.5 PRH1 chr12 10824960 11171544 - protein_coding KNOWN OTTHUMG00000186774.3 346585 1792 23 ENSG00000186306.1 OR10T2 chr1 158398522 158399466 - protein_coding KNOWN OTTHUMG00000017521.1 945 945 1 ENSG00000121318.2 TAS2R10 chr12 10825317 10826358 - protein_coding KNOWN OTTHUMG00000168508.1 1042 1042 1 ENSG00000256651.1 RP11-144O23.8 chr12 10831074 10832016 - processed_pseudogene KNOWN OTTHUMG00000168509.1 943 943 1 ENSG00000275778.1 PRH1-PRR4 chr12 10845849 11171598 - protein_coding KNOWN OTTHUMG00000186775.1 325750 1618 10 ENSG00000111215.10 PRR4 chr12 10845849 11171613 - protein_coding KNOWN OTTHUMG00000168522.5 325765 3026 43 ENSG00000256682.2 TAS2R12 chr12 10894943 10896952 - transcribed_processed_pseudogene KNOWN OTTHUMG00000168554.2 2010 1075 3 ENSG00000212128.2 TAS2R13 chr12 10907926 10909562 - protein_coding KNOWN OTTHUMG00000168555.1 1637 1637 1 ENSG00000134551.11 PRH2 chr12 10929236 10932341 + protein_coding KNOWN OTTHUMG00000168556.1 3106 757 7 ENSG00000212127.5 TAS2R14 chr12 10937406 11171573 - protein_coding KNOWN OTTHUMG00000162720.4 234168 2350 6 ENSG00000212125.2 TAS2R15P chr12 10964425 10965352 - processed_pseudogene KNOWN OTTHUMG00000169063.1 928 928 1 ENSG00000212126.3 TAS2R50 chr12 10985913 10986912 - protein_coding KNOWN OTTHUMG00000162719.2 1000 1000 1 ENSG00000180708.4 OR10K2 chr1 158419928 158420866 - protein_coding KNOWN OTTHUMG00000019638.1 939 939 1 ENSG00000255837.1 TAS2R20 chr12 10996495 10997875 - protein_coding KNOWN OTTHUMG00000162695.2 1381 1381 1 ENSG00000212124.2 TAS2R19 chr12 11021619 11022620 - protein_coding KNOWN OTTHUMG00000162687.1 1002 1002 1 ENSG00000256436.1 TAS2R31 chr12 11030387 11031407 - protein_coding KNOWN OTTHUMG00000168558.1 1021 1021 1 ENSG00000256019.1 TAS2R63P chr12 11048332 11049256 - processed_pseudogene KNOWN OTTHUMG00000168559.1 925 925 1 ENSG00000226761.3 TAS2R46 chr12 11061365 11062294 - protein_coding KNOWN OTTHUMG00000165351.1 930 930 1 ENSG00000256274.1 TAS2R64P chr12 11076769 11079171 - transcribed_processed_pseudogene KNOWN OTTHUMG00000168560.1 2403 2403 2 ENSG00000256188.2 TAS2R30 chr12 11077313 11134644 - protein_coding KNOWN OTTHUMG00000168562.1 57332 1831 3 ENSG00000255374.2 TAS2R43 chr12 11091287 11134244 - protein_coding KNOWN OTTHUMG00000165352.1 42958 1114 3 ENSG00000256400.1 RP11-673D15.7 chr12 11097179 11097274 - processed_pseudogene KNOWN OTTHUMG00000168561.1 96 96 1 ENSG00000256981.1 TAS2R18 chr12 11158785 11159694 - processed_pseudogene KNOWN OTTHUMG00000168563.1 910 910 1 ENSG00000241563.3 CORT chr1 10449719 10451902 + protein_coding KNOWN OTTHUMG00000001906.4 2184 1130 2 ENSG00000203758.4 OR10T1P chr1 158445068 158446014 - unprocessed_pseudogene KNOWN OTTHUMG00000019631.1 947 947 1 ENSG00000256712.1 RP11-785H5.2 chr12 11166090 11171353 - sense_intronic NOVEL OTTHUMG00000168564.1 5264 385 2 ENSG00000256537.3 RP11-785H5.1 chr12 11171181 11176020 + lincRNA NOVEL OTTHUMG00000168565.2 4840 4840 2 ENSG00000186136.1 TAS2R42 chr12 11185993 11186937 - protein_coding KNOWN OTTHUMG00000168567.2 945 945 1 ENSG00000256657.1 RP11-144O23.22 chr12 11196075 11196996 - processed_pseudogene KNOWN OTTHUMG00000169064.2 922 922 1 ENSG00000275119.1 RP11-711K1.8 chr12 11212219 11251389 + lincRNA NOVEL OTTHUMG00000169115.2 39171 512 2 ENSG00000197870.11 PRB3 chr12 11265924 11269805 - protein_coding KNOWN OTTHUMG00000169065.8 3882 1386 11 ENSG00000230657.5 PRB4 chr12 11307083 11310435 - protein_coding KNOWN OTTHUMG00000169116.1 3353 916 16 ENSG00000251655.5 PRB1 chr12 11351823 11395566 - protein_coding KNOWN OTTHUMG00000157263.4 43744 1311 19 ENSG00000121335.11 PRB2 chr12 11391540 11501041 - protein_coding KNOWN OTTHUMG00000156975.5 109502 1793 8 ENSG00000255790.4 RP11-711K1.7 chr12 11399381 11486678 - sense_intronic NOVEL OTTHUMG00000169117.2 87298 1224 20 ENSG00000236257.1 EI24P2 chr1 158454198 158455273 + processed_pseudogene KNOWN OTTHUMG00000017519.1 1076 1076 1 ENSG00000281730.1 AC078950.1 chr12 11467499 11467566 + miRNA NOVEL NA 68 68 1 ENSG00000237303.2 HIGD1AP8 chr12 11481383 11481656 + processed_pseudogene KNOWN OTTHUMG00000169118.1 274 274 1 ENSG00000278654.1 RP11-434C1.4 chr12 11500499 11501022 + processed_pseudogene KNOWN OTTHUMG00000187883.1 524 524 1 ENSG00000277705.1 RP11-434C1.5 chr12 11507162 11507408 - processed_pseudogene KNOWN OTTHUMG00000187885.1 247 247 1 ENSG00000270863.1 DDX55P1 chr12 11512723 11514136 + processed_pseudogene KNOWN OTTHUMG00000184770.1 1414 1414 1 ENSG00000274551.1 RP11-434C1.6 chr12 11516425 11521686 - unprocessed_pseudogene KNOWN OTTHUMG00000187888.1 5262 290 2 ENSG00000256237.1 RP11-434C1.2 chr12 11541395 11555838 - lincRNA NOVEL OTTHUMG00000168536.1 14444 188 2 ENSG00000221128.1 AC007450.1 chr12 11541923 11542045 - miRNA NOVEL NA 123 123 1 ENSG00000251747.1 RNU7-60P chr12 11546479 11546540 + snRNA KNOWN NA 62 62 1 ENSG00000247157.5 LINC01252 chr12 11548030 11590369 + lincRNA NOVEL OTTHUMG00000168537.1 42340 3793 13 ENSG00000173285.3 OR10K1 chr1 158465562 158466503 + protein_coding KNOWN OTTHUMG00000017517.1 942 942 1 ENSG00000139083.9 ETV6 chr12 11649854 11895402 + protein_coding KNOWN OTTHUMG00000168538.2 245549 7075 20 ENSG00000121380.11 BCL2L14 chr12 12049844 12211084 + protein_coding KNOWN OTTHUMG00000159528.4 161241 5112 67 ENSG00000198134.3 RP11-267J23.4 chr12 12111163 12111489 + processed_pseudogene KNOWN OTTHUMG00000168539.1 327 327 1 ENSG00000070018.7 LRP6 chr12 12116025 12267012 - protein_coding KNOWN OTTHUMG00000168540.1 150988 10337 83 ENSG00000242405.2 RP11-267J23.1 chr12 12155262 12155772 + processed_pseudogene KNOWN OTTHUMG00000157455.2 511 511 1 ENSG00000199551.1 RNU6-545P chr12 12226674 12226777 + snRNA KNOWN NA 104 104 1 ENSG00000270857.1 RP11-757G14.3 chr12 12248991 12249427 + processed_pseudogene KNOWN OTTHUMG00000184767.1 437 437 1 ENSG00000207010.1 RNU6-318P chr12 12289227 12289329 - snRNA KNOWN NA 103 103 1 ENSG00000111261.12 MANSC1 chr12 12326056 12350541 - protein_coding KNOWN OTTHUMG00000168541.2 24486 6015 14 ENSG00000243141.2 RP11-757G14.1 chr12 12338776 12339254 + processed_pseudogene KNOWN OTTHUMG00000157461.2 479 479 1 ENSG00000236656.1 RP11-144L1.4 chr1 158474454 158494886 - antisense NOVEL OTTHUMG00000017520.2 20433 2597 6 ENSG00000205791.3 LOH12CR2 chr12 12355406 12357067 - lincRNA KNOWN OTTHUMG00000187482.1 1662 1540 2 ENSG00000165714.9 LOH12CR1 chr12 12357079 12469694 + protein_coding KNOWN OTTHUMG00000168542.2 112616 4980 14 ENSG00000271370.1 RP11-253I19.4 chr12 12452103 12452481 - processed_pseudogene KNOWN OTTHUMG00000184718.1 379 379 1 ENSG00000111266.7 DUSP16 chr12 12474210 12562383 - protein_coding KNOWN OTTHUMG00000168582.2 88174 5724 24 ENSG00000255670.1 RP11-253I19.3 chr12 12485353 12491581 + lincRNA KNOWN OTTHUMG00000168583.1 6229 412 2 ENSG00000240424.2 RP11-158N24.1 chr12 12568201 12568776 - processed_pseudogene KNOWN OTTHUMG00000157462.2 576 576 1 ENSG00000111269.2 CREBL2 chr12 12611827 12645108 + protein_coding KNOWN OTTHUMG00000168704.1 33282 3922 8 ENSG00000271215.1 RPL21P136 chr12 12614359 12615907 - processed_pseudogene KNOWN OTTHUMG00000184724.1 1549 396 4 ENSG00000275963.1 RP11-180M15.6 chr12 12648939 12649713 + lincRNA NOVEL OTTHUMG00000187147.1 775 775 1 ENSG00000183150.6 GPR19 chr12 12660891 12696207 - protein_coding KNOWN OTTHUMG00000168705.1 35317 2623 17 ENSG00000198965.3 OR10R2 chr1 158479878 158480885 + protein_coding KNOWN OTTHUMG00000019632.2 1008 1008 1 ENSG00000257004.1 RP11-180M15.3 chr12 12668982 12685075 + lincRNA NOVEL OTTHUMG00000168706.1 16094 241 2 ENSG00000111276.9 CDKN1B chr12 12715058 12722371 + protein_coding KNOWN OTTHUMG00000149914.2 7314 2811 12 ENSG00000275560.1 RP11-180M15.7 chr12 12718973 12719521 + sense_intronic NOVEL OTTHUMG00000187159.1 549 549 1 ENSG00000256658.1 RP11-180M15.4 chr12 12723297 12724011 - antisense NOVEL OTTHUMG00000168707.1 715 150 2 ENSG00000178878.11 APOLD1 chr12 12725917 12829975 + protein_coding KNOWN OTTHUMG00000153561.2 104059 7243 25 ENSG00000207983.1 MIR613 chr12 12764649 12764743 + miRNA KNOWN NA 95 95 1 ENSG00000270296.1 STX8P1 chr12 12771351 12771705 - processed_pseudogene KNOWN OTTHUMG00000184726.1 355 355 1 ENSG00000213782.6 DDX47 chr12 12813316 12829981 + protein_coding KNOWN OTTHUMG00000168709.1 16666 5040 79 ENSG00000242329.1 RP11-59H1.1 chr12 12840804 12841079 - processed_pseudogene KNOWN OTTHUMG00000157463.1 276 276 1 ENSG00000241352.3 RP11-392P7.1 chr12 12850982 12851740 + processed_pseudogene KNOWN OTTHUMG00000157466.2 759 759 1 ENSG00000198703.2 OR10R3P chr1 158491219 158492160 + unprocessed_pseudogene KNOWN OTTHUMG00000019630.1 942 942 1 ENSG00000234498.3 RPL13AP20 chr12 12875499 12876107 + processed_pseudogene KNOWN OTTHUMG00000157469.1 609 609 1 ENSG00000013588.5 GPRC5A chr12 12890782 12917937 + protein_coding KNOWN OTTHUMG00000168710.1 27156 8440 13 ENSG00000207817.1 MIR614 chr12 12915829 12915918 + miRNA KNOWN NA 90 90 1 ENSG00000247498.8 RP11-392P7.6 chr12 12927726 12984645 + antisense NOVEL OTTHUMG00000168719.4 56920 3416 28 ENSG00000111291.7 GPRC5D chr12 12940775 12952147 - protein_coding KNOWN OTTHUMG00000168711.2 11373 1124 7 ENSG00000256011.1 RP11-392P7.7 chr12 12962300 12963539 + antisense NOVEL OTTHUMG00000168720.1 1240 369 2 ENSG00000221611.1 SNORD88 chr12 12972053 12972143 + snoRNA NOVEL NA 91 91 1 ENSG00000013583.7 HEBP1 chr12 12974864 13000273 - protein_coding KNOWN OTTHUMG00000168771.1 25410 3442 13 ENSG00000183935.5 HTR7P1 chr12 13000420 13004830 + transcribed_processed_pseudogene KNOWN OTTHUMG00000167959.2 4411 4411 2 ENSG00000255621.1 RP11-377D9.3 chr12 13000451 13040679 + lincRNA NOVEL OTTHUMG00000168772.1 40229 2403 5 ENSG00000227445.1 OR10R1P chr1 158514785 158515925 + unprocessed_pseudogene KNOWN OTTHUMG00000019628.1 1141 1141 1 ENSG00000243129.2 RP11-377D9.1 chr12 13021260 13021606 - processed_pseudogene KNOWN OTTHUMG00000157486.2 347 347 1 ENSG00000084444.12 KIAA1467 chr12 13044284 13142521 + protein_coding KNOWN OTTHUMG00000168774.2 98238 6807 47 ENSG00000111305.17 GSG1 chr12 13083560 13103683 - protein_coding KNOWN OTTHUMG00000150148.3 20124 3005 50 ENSG00000134531.8 EMP1 chr12 13196716 13219939 + protein_coding KNOWN OTTHUMG00000168775.3 23224 7838 38 ENSG00000180861.8 LINC01559 chr12 13371089 13387167 - lincRNA KNOWN OTTHUMG00000167562.3 16079 3953 14 ENSG00000201476.1 RNA5SP353 chr12 13440884 13441001 - rRNA KNOWN NA 118 118 1 ENSG00000201909.1 RNU6-590P chr12 13459670 13459776 - snRNA KNOWN NA 107 107 1 ENSG00000256306.1 RP11-4N23.1 chr12 13526854 13547582 + processed_transcript NOVEL OTTHUMG00000168642.1 20729 578 4 ENSG00000273079.3 GRIN2B chr12 13537337 13981957 - protein_coding KNOWN OTTHUMG00000137373.8 444621 30672 26 ENSG00000277935.1 RP11-4N23.4 chr12 13540231 13544540 + lincRNA NOVEL OTTHUMG00000186750.1 4310 546 2 ENSG00000231434.1 RP11-144L1.8 chr1 158523672 158525838 + processed_pseudogene KNOWN OTTHUMG00000019634.1 2167 2167 1 ENSG00000252445.1 AC007535.1 chr12 13587880 13587984 - miRNA NOVEL NA 105 105 1 ENSG00000200475.1 RN7SKP162 chr12 13683542 13683886 + misc_RNA KNOWN NA 345 345 1 ENSG00000274302.1 AC092470.1 chr12 14126008 14126074 + miRNA NOVEL NA 67 67 1 ENSG00000256346.1 RP11-72J9.1 chr12 14169746 14169877 + processed_pseudogene KNOWN OTTHUMG00000168651.1 132 132 1 ENSG00000227760.2 RP11-298E10.1 chr12 14192002 14192284 + processed_pseudogene KNOWN OTTHUMG00000168652.2 283 283 1 ENSG00000256084.1 RP11-134N1.2 chr12 14216590 14221297 + lincRNA NOVEL OTTHUMG00000168653.1 4708 640 2 ENSG00000255763.1 MRPS18CP4 chr12 14237091 14237321 + processed_pseudogene KNOWN OTTHUMG00000168654.1 231 231 1 ENSG00000251908.1 RNU6-491P chr12 14250232 14250341 - snRNA KNOWN NA 110 110 1 ENSG00000255749.1 GNAI2P1 chr12 14254912 14255226 + processed_pseudogene KNOWN OTTHUMG00000168655.2 315 315 1 ENSG00000244573.3 RPL30P11 chr12 14356842 14365503 - transcribed_processed_pseudogene KNOWN OTTHUMG00000157491.5 8662 668 5 ENSG00000197532.1 OR6Y1 chr1 158547128 158548105 - protein_coding KNOWN OTTHUMG00000019629.1 978 978 1 ENSG00000171681.11 ATF7IP chr12 14365632 14502935 + protein_coding KNOWN OTTHUMG00000168656.13 137304 13189 141 ENSG00000121316.9 PLBD1 chr12 14503661 14568349 - protein_coding KNOWN OTTHUMG00000168821.3 64689 2841 25 ENSG00000255649.1 RP11-502N13.2 chr12 14530151 14533229 + antisense NOVEL OTTHUMG00000168822.1 3079 427 3 ENSG00000200830.1 RN7SKP134 chr12 14553702 14553970 - misc_RNA KNOWN NA 269 269 1 ENSG00000256751.4 PLBD1-AS1 chr12 14567750 14619755 + antisense NOVEL OTTHUMG00000168733.2 52006 596 10 ENSG00000070019.4 GUCY2C chr12 14612632 14696585 - protein_coding KNOWN OTTHUMG00000168732.2 83954 4177 35 ENSG00000214772.2 RP11-174G6.1 chr12 14665655 14757963 + antisense NOVEL OTTHUMG00000168734.1 92309 657 5 ENSG00000261324.2 RP11-174G6.5 chr12 14762504 14767931 - sense_overlapping NOVEL OTTHUMG00000172902.2 5428 5428 1 ENSG00000197837.3 HIST4H4 chr12 14767999 14771131 - protein_coding KNOWN OTTHUMG00000168735.1 3133 2578 11 ENSG00000246705.4 H2AFJ chr12 14774383 14778002 + protein_coding KNOWN OTTHUMG00000168736.2 3620 3356 5 ENSG00000186440.1 OR6P1 chr1 158562651 158563604 - protein_coding KNOWN OTTHUMG00000019633.1 954 954 1 ENSG00000281457.1 AC010168.1 chr12 14774716 14774860 - miRNA NOVEL NA 145 145 1 ENSG00000084463.6 WBP11 chr12 14784579 14803540 - protein_coding KNOWN OTTHUMG00000168737.3 18962 5315 30 ENSG00000182993.3 C12orf60 chr12 14803572 14906586 + protein_coding KNOWN OTTHUMG00000167473.2 103015 4570 10 ENSG00000179256.2 SMCO3 chr12 14804650 14814182 - protein_coding KNOWN OTTHUMG00000167474.1 9533 2104 2 ENSG00000111339.9 ART4 chr12 14825569 14843495 - protein_coding KNOWN OTTHUMG00000168738.1 17927 5214 10 ENSG00000256339.1 RP11-233G1.4 chr12 14841092 14844708 + antisense NOVEL OTTHUMG00000168739.1 3617 357 2 ENSG00000111341.8 MGP chr12 14881181 14885926 - protein_coding KNOWN OTTHUMG00000168740.1 4746 2639 13 ENSG00000139055.5 ERP27 chr12 14914035 14939082 - protein_coding KNOWN OTTHUMG00000168741.1 25048 2426 14 ENSG00000111348.7 ARHGDIB chr12 14942017 14961728 - protein_coding KNOWN OTTHUMG00000168742.2 19712 2102 45 ENSG00000139053.2 PDE6H chr12 14973022 14981865 + protein_coding KNOWN OTTHUMG00000168743.1 8844 747 4 ENSG00000160049.10 DFFA chr1 10456522 10472526 - protein_coding KNOWN OTTHUMG00000001909.3 16005 6622 16 ENSG00000186400.3 OR10X1 chr1 158578919 158579899 - protein_coding KNOWN NA 981 981 1 ENSG00000255727.1 LINC01489 chr12 15001833 15006683 + lincRNA NOVEL OTTHUMG00000168744.1 4851 605 4 ENSG00000134533.5 RERG chr12 15107783 15348675 - protein_coding KNOWN OTTHUMG00000168745.1 240893 4157 34 ENSG00000256650.1 RERG-IT1 chr12 15112363 15114698 - sense_intronic NOVEL OTTHUMG00000168746.1 2336 301 2 ENSG00000255660.1 RERG-AS1 chr12 15151923 15155283 + lincRNA NOVEL OTTHUMG00000168747.1 3361 337 3 ENSG00000256283.1 METTL8P1 chr12 15255213 15255823 - processed_pseudogene KNOWN OTTHUMG00000168748.1 611 611 1 ENSG00000151490.12 PTPRO chr12 15322397 15597399 + protein_coding KNOWN OTTHUMG00000168786.1 275003 7519 137 ENSG00000243916.1 RP11-6K23.1 chr12 15439527 15440401 + processed_pseudogene KNOWN OTTHUMG00000157493.1 875 875 1 ENSG00000151491.11 EPS8 chr12 15620158 15882329 - protein_coding KNOWN OTTHUMG00000168787.1 262172 6200 163 ENSG00000200105.1 RNU6-251P chr12 15671707 15671810 - snRNA KNOWN NA 104 104 1 ENSG00000255565.1 RP11-6B19.1 chr12 15780068 15782120 + lincRNA NOVEL OTTHUMG00000168788.1 2053 465 2 ENSG00000279111.1 OR10X1 chr1 158578919 158579899 - polymorphic_pseudogene KNOWN OTTHUMG00000019635.2 981 981 2 ENSG00000256627.1 RP11-6B19.3 chr12 15803164 15804158 + processed_pseudogene KNOWN OTTHUMG00000168789.1 995 660 2 ENSG00000256953.1 RP11-6B19.2 chr12 15813493 15828274 - lincRNA NOVEL OTTHUMG00000168790.1 14782 417 3 ENSG00000023734.9 STRAP chr12 15882391 15903478 + protein_coding KNOWN OTTHUMG00000168791.1 21088 2211 37 ENSG00000023697.11 DERA chr12 15911172 16037282 + protein_coding KNOWN OTTHUMG00000165537.2 126111 2844 70 ENSG00000256134.1 EGLN3P1 chr12 15971890 15972609 - processed_pseudogene KNOWN OTTHUMG00000168792.1 720 720 1 ENSG00000277216.1 AC022073.1 chr12 15988408 15988493 - miRNA NOVEL NA 86 86 1 ENSG00000188991.3 SLC15A5 chr12 16188485 16277685 - protein_coding KNOWN OTTHUMG00000168793.2 89201 2923 9 ENSG00000008394.11 MGST1 chr12 16347142 16609259 + protein_coding KNOWN OTTHUMG00000168816.3 262118 7440 65 ENSG00000274188.1 AC007528.2 chr12 16388101 16388192 + miRNA NOVEL NA 92 92 1 ENSG00000256238.1 RP11-473N11.2 chr12 16399274 16402406 - processed_pseudogene KNOWN OTTHUMG00000168818.2 3133 3133 1 ENSG00000198967.3 OR10Z1 chr1 158606439 158607380 + protein_coding KNOWN OTTHUMG00000019637.1 942 942 1 ENSG00000215923.1 AC007528.1 chr12 16409255 16409331 - miRNA NOVEL NA 77 77 1 ENSG00000256450.1 RP11-424M22.1 chr12 16513445 16514371 + processed_pseudogene KNOWN OTTHUMG00000168836.1 927 927 1 ENSG00000048540.13 LMO3 chr12 16548373 16610594 - protein_coding KNOWN OTTHUMG00000168837.2 62222 10268 145 ENSG00000256564.1 RP11-424M22.3 chr12 16567411 16573940 + antisense NOVEL OTTHUMG00000168838.1 6530 603 2 ENSG00000255871.2 RP11-69C13.1 chr12 16693800 16695977 + lincRNA NOVEL OTTHUMG00000168856.2 2178 2178 1 ENSG00000255740.2 RP11-239A17.1 chr12 16786762 16787845 + lincRNA NOVEL OTTHUMG00000168857.2 1084 260 2 ENSG00000256211.1 RP11-1018J11.1 chr12 16989126 16989936 + processed_pseudogene KNOWN OTTHUMG00000168858.1 811 499 2 ENSG00000213235.3 EEF1A1P16 chr12 16990670 16992083 + processed_pseudogene KNOWN OTTHUMG00000168859.1 1414 1414 1 ENSG00000212358.1 RNU6-837P chr12 17071398 17071505 - snRNA KNOWN NA 108 108 1 ENSG00000242991.2 RPL7P40 chr12 17121716 17122460 + processed_pseudogene KNOWN OTTHUMG00000157496.3 745 745 1 ENSG00000163554.10 SPTA1 chr1 158610706 158686698 - protein_coding KNOWN OTTHUMG00000019636.4 75993 10025 132 ENSG00000256896.1 PSMC1P8 chr12 17383352 17384647 - processed_pseudogene KNOWN OTTHUMG00000168806.1 1296 1296 1 ENSG00000256756.1 TIMM17BP1 chr12 17400399 17400914 + processed_pseudogene KNOWN OTTHUMG00000168807.1 516 516 1 ENSG00000256994.1 RP11-871F6.3 chr12 17509353 17589992 - lincRNA NOVEL OTTHUMG00000168808.2 80640 1003 8 ENSG00000256389.1 RP11-606D9.1 chr12 17589257 17615463 + lincRNA NOVEL OTTHUMG00000168815.1 26207 460 2 ENSG00000206662.1 Y_RNA chr12 17710934 17711046 + misc_RNA NOVEL NA 113 113 1 ENSG00000111404.5 RERGL chr12 18080869 18320107 - protein_coding KNOWN OTTHUMG00000168820.2 239239 1549 29 ENSG00000139144.8 PIK3C2G chr12 18247614 18648416 + protein_coding KNOWN OTTHUMG00000168841.4 400803 5925 148 ENSG00000255892.1 NDFIP1P1 chr12 18358443 18358967 - processed_pseudogene KNOWN OTTHUMG00000169000.1 525 525 1 ENSG00000255960.1 RP11-459D22.1 chr12 18424663 18425140 + processed_pseudogene KNOWN OTTHUMG00000168842.1 478 478 1 ENSG00000256138.1 ZKSCAN7P1 chr12 18493051 18493723 + processed_pseudogene KNOWN OTTHUMG00000168843.1 673 673 1 ENSG00000231237.1 OR6K1P chr1 158694539 158695509 - unprocessed_pseudogene KNOWN OTTHUMG00000022773.1 971 971 1 ENSG00000139151.13 PLCZ1 chr12 18683169 18738057 - protein_coding KNOWN OTTHUMG00000168937.9 54889 3388 137 ENSG00000255993.1 PSMC1P9 chr12 18692762 18694096 + processed_pseudogene KNOWN OTTHUMG00000168910.1 1335 1335 1 ENSG00000255648.1 RP11-361I14.2 chr12 18714795 18737878 + antisense NOVEL OTTHUMG00000168938.1 23084 572 3 ENSG00000177938.4 CAPZA3 chr12 18738101 18739187 + protein_coding KNOWN OTTHUMG00000169001.1 1087 1087 1 ENSG00000227525.4 RPL7P6 chr12 19089151 19089888 + processed_pseudogene KNOWN OTTHUMG00000157497.1 738 738 1 ENSG00000256844.1 MEF2BNBP1 chr12 19107854 19108183 - processed_pseudogene KNOWN OTTHUMG00000168903.1 330 330 1 ENSG00000052126.13 PLEKHA5 chr12 19129752 19376400 + protein_coding KNOWN OTTHUMG00000167921.2 246649 12558 213 ENSG00000253284.2 RP11-282K24.3 chr12 19147074 19154659 + sense_intronic NOVEL OTTHUMG00000168904.1 7586 5391 2 ENSG00000240993.3 RN7SL459P chr12 19176288 19176589 - misc_RNA KNOWN NA 302 302 1 ENSG00000243854.3 RN7SL67P chr12 19303480 19303775 + misc_RNA KNOWN NA 296 296 1 ENSG00000196171.3 OR6K2 chr1 158699678 158700652 - protein_coding KNOWN OTTHUMG00000022768.1 975 975 1 ENSG00000139154.13 AEBP2 chr12 19404045 19720801 + protein_coding KNOWN OTTHUMG00000168906.3 316757 6572 48 ENSG00000255909.1 PDCD5P1 chr12 19413153 19413461 + processed_pseudogene KNOWN OTTHUMG00000168907.1 309 309 1 ENSG00000271462.1 RP11-841C19.4 chr12 19418927 19419161 - processed_pseudogene KNOWN OTTHUMG00000168908.2 235 235 1 ENSG00000200247.1 RNU6-254P chr12 19445949 19446055 - snRNA KNOWN NA 107 107 1 ENSG00000245205.3 EEF1A1P4 chr12 19456244 19457648 - processed_pseudogene KNOWN OTTHUMG00000168909.1 1405 1405 1 ENSG00000240328.1 RP11-841C19.1 chr12 19508904 19509245 + processed_pseudogene KNOWN OTTHUMG00000157501.1 342 342 1 ENSG00000200885.1 RNU1-146P chr12 19724435 19724599 + snRNA KNOWN NA 165 165 1 ENSG00000255910.1 RP11-405A12.2 chr12 19775451 20009937 + lincRNA NOVEL OTTHUMG00000168939.1 234487 718 5 ENSG00000256849.1 RP11-405A12.1 chr12 19941521 19943018 + processed_pseudogene KNOWN OTTHUMG00000168940.1 1498 1498 1 ENSG00000221679.1 AC087237.1 chr12 19972865 19972981 + miRNA NOVEL NA 117 117 1 ENSG00000203757.1 OR6K3 chr1 158717168 158718163 - protein_coding KNOWN OTTHUMG00000022770.1 996 996 2 ENSG00000256287.1 RP11-664H17.1 chr12 20014780 20098868 + lincRNA NOVEL OTTHUMG00000168941.1 84089 431 3 ENSG00000256499.1 CTC-465D4.1 chr12 20120980 20129813 - lincRNA NOVEL OTTHUMG00000168914.1 8834 633 5 ENSG00000256879.1 RP11-284H19.1 chr12 20361732 20370262 - antisense NOVEL OTTHUMG00000168961.1 8531 525 2 ENSG00000172572.6 PDE3A chr12 20369245 20684381 + protein_coding KNOWN OTTHUMG00000168962.2 315137 8398 33 ENSG00000131982.5 UBE2L2 chr12 20449655 20450083 - processed_pseudogene KNOWN OTTHUMG00000168963.1 429 429 1 ENSG00000256663.1 RP11-424C20.2 chr12 20551590 20553012 + processed_pseudogene KNOWN OTTHUMG00000168964.1 1423 1423 1 ENSG00000139155.7 SLCO1C1 chr12 20695355 20753386 + protein_coding KNOWN OTTHUMG00000168966.2 58032 4860 84 ENSG00000111700.11 SLCO1B3 chr12 20810702 20916911 + protein_coding KNOWN OTTHUMG00000169011.4 106210 3542 52 ENSG00000257046.4 RP11-545J16.1 chr12 20815674 21090245 + protein_coding NOVEL OTTHUMG00000169018.1 274572 3774 30 ENSG00000256157.1 RP11-80N2.2 chr12 20845065 20845260 + processed_pseudogene KNOWN OTTHUMG00000169012.1 196 196 1 ENSG00000180437.5 OR6K4P chr1 158724113 158725067 - unprocessed_pseudogene KNOWN OTTHUMG00000022777.1 955 955 1 ENSG00000205754.9 SLCO1B7 chr12 21015696 21092745 + protein_coding KNOWN OTTHUMG00000169045.1 77050 2681 20 ENSG00000257062.5 RP11-125O5.2 chr12 21047179 21176895 + protein_coding NOVEL OTTHUMG00000169046.2 129717 855 30 ENSG00000134538.2 SLCO1B1 chr12 21131202 21239246 + protein_coding KNOWN OTTHUMG00000169047.1 108045 2229 15 ENSG00000084453.15 SLCO1A2 chr12 21264600 21419594 - protein_coding KNOWN OTTHUMG00000156259.8 154995 11520 129 ENSG00000121351.6 IAPP chr12 21354959 21379978 + protein_coding KNOWN OTTHUMG00000169128.1 25020 2167 16 ENSG00000121350.14 PYROXD1 chr12 21437615 21471252 + protein_coding KNOWN OTTHUMG00000169129.2 33638 5725 69 ENSG00000256021.1 TCEB1P31 chr12 21447545 21448314 - processed_pseudogene KNOWN OTTHUMG00000169130.1 770 467 2 ENSG00000004700.14 RECQL chr12 21468911 21501669 - protein_coding KNOWN OTTHUMG00000169131.1 32759 3778 63 ENSG00000111711.8 GOLT1B chr12 21501781 21518408 + protein_coding KNOWN OTTHUMG00000169133.2 16628 3789 46 ENSG00000134548.8 SPX chr12 21526307 21537377 + protein_coding KNOWN OTTHUMG00000169134.2 11071 3359 29 ENSG00000226949.1 OR6K5P chr1 158742146 158743415 - unprocessed_pseudogene KNOWN OTTHUMG00000022778.1 1270 945 2 ENSG00000111713.2 GYS2 chr12 21536189 21604847 - protein_coding KNOWN OTTHUMG00000169135.1 68659 3132 16 ENSG00000111716.11 LDHB chr12 21635342 21757857 - protein_coding KNOWN OTTHUMG00000133760.3 122516 2983 46 ENSG00000256615.1 RP11-59N23.3 chr12 21662313 21760032 + antisense NOVEL OTTHUMG00000169137.1 97720 578 2 ENSG00000255644.1 RP11-59N23.1 chr12 21759980 21766705 + antisense NOVEL OTTHUMG00000169092.1 6726 456 2 ENSG00000121361.3 KCNJ8 chr12 21764955 21775581 - protein_coding KNOWN OTTHUMG00000169093.1 10627 2484 5 ENSG00000069431.9 ABCC9 chr12 21797401 21941402 - protein_coding KNOWN OTTHUMG00000169094.2 144002 11421 124 ENSG00000257022.1 RP11-729I10.2 chr12 21827210 21887957 + antisense NOVEL OTTHUMG00000169095.1 60748 522 4 ENSG00000275567.1 RP11-729I10.3 chr12 21828360 21828564 - sense_intronic NOVEL OTTHUMG00000187104.1 205 205 1 ENSG00000255627.1 RP11-547L9.1 chr12 22008348 22008880 + processed_pseudogene KNOWN OTTHUMG00000169096.1 533 533 1 ENSG00000111726.11 CMAS chr12 22046174 22065674 + protein_coding KNOWN OTTHUMG00000169097.1 19501 2018 27 ENSG00000180433.4 OR6K6 chr1 158754720 158755891 + protein_coding KNOWN OTTHUMG00000022772.2 1172 1172 1 ENSG00000111728.9 ST8SIA1 chr12 22063773 22437041 - protein_coding KNOWN OTTHUMG00000169098.2 373269 14483 56 ENSG00000274624.1 RP11-49G2.3 chr12 22104491 22105320 - sense_intronic NOVEL OTTHUMG00000187113.1 830 830 1 ENSG00000212172.1 RNU1-149P chr12 22195469 22195629 - snRNA KNOWN NA 161 161 1 ENSG00000256714.1 RP11-73M14.1 chr12 22395088 22398075 - lincRNA NOVEL OTTHUMG00000169099.1 2988 389 2 ENSG00000111731.11 C2CD5 chr12 22448583 22544546 - protein_coding KNOWN OTTHUMG00000169100.2 95964 6759 230 ENSG00000256973.1 RP11-359J14.2 chr12 22460519 22463914 - lincRNA NOVEL OTTHUMG00000169101.1 3396 738 2 ENSG00000256371.1 LRRC34P1 chr12 22573425 22575105 + processed_pseudogene KNOWN OTTHUMG00000169102.1 1681 915 3 ENSG00000256774.1 RP11-268P4.2 chr12 22596228 22596551 + processed_pseudogene KNOWN OTTHUMG00000169007.1 324 324 1 ENSG00000250166.2 RP11-268P4.5 chr12 22601425 22618867 + lincRNA NOVEL OTTHUMG00000169038.1 17443 429 2 ENSG00000257023.1 RP11-268P4.4 chr12 22609228 22625015 - antisense NOVEL OTTHUMG00000169039.1 15788 862 2 ENSG00000203469.2 RP5-1113E3.3 chr1 10458555 10459338 + antisense NOVEL OTTHUMG00000001907.1 784 467 2 ENSG00000197403.3 OR6N1 chr1 158765744 158766682 - protein_coding KNOWN OTTHUMG00000022774.1 939 939 1 ENSG00000139163.14 ETNK1 chr12 22625075 22690665 + protein_coding KNOWN OTTHUMG00000169008.4 65591 8191 28 ENSG00000274885.1 RP11-268P4.6 chr12 22638464 22638943 + sense_intronic NOVEL OTTHUMG00000187116.1 480 480 1 ENSG00000256995.5 RP11-114G22.1 chr12 22699859 23174125 + lincRNA NOVEL OTTHUMG00000169009.6 474267 5441 51 ENSG00000241451.2 RPS27P22 chr12 22722229 22722469 + processed_pseudogene KNOWN OTTHUMG00000157506.2 241 241 1 ENSG00000256923.1 RP11-449P1.1 chr12 22742582 22743091 + lincRNA NOVEL OTTHUMG00000169010.1 510 424 2 ENSG00000256321.4 RP11-153K16.1 chr12 23099368 23191587 + lincRNA NOVEL OTTHUMG00000169025.2 92220 1743 11 ENSG00000256353.1 RP11-686N4.1 chr12 23108458 23108493 - processed_pseudogene KNOWN OTTHUMG00000169040.1 36 36 1 ENSG00000115934.11 RP11-153K16.2 chr12 23181334 23251499 - lincRNA NOVEL OTTHUMG00000169041.1 70166 1329 2 ENSG00000134532.14 SOX5 chr12 23529500 23951032 - protein_coding KNOWN OTTHUMG00000169026.4 421533 8885 138 ENSG00000256473.1 RP11-437F6.1 chr12 23637973 23638487 + antisense NOVEL OTTHUMG00000169027.1 515 401 2 ENSG00000188340.1 OR6N2 chr1 158776682 158777635 - protein_coding KNOWN OTTHUMG00000022775.1 954 954 1 ENSG00000216192.1 MIR920 chr12 24212421 24212495 + miRNA KNOWN NA 75 75 1 ENSG00000255864.4 RP11-444D3.1 chr12 24213256 24562590 - lincRNA NOVEL OTTHUMG00000169057.3 349335 1693 24 ENSG00000256120.1 RP11-778H2.1 chr12 24223271 24237965 + lincRNA NOVEL OTTHUMG00000169058.1 14695 710 7 ENSG00000197503.4 LINC00477 chr12 24566964 24584168 - lincRNA NOVEL OTTHUMG00000159485.1 17205 1710 4 ENSG00000256852.1 KNOP1P1 chr12 24583561 24584549 + processed_pseudogene KNOWN OTTHUMG00000169059.2 989 989 1 ENSG00000244662.1 RP11-615I16.1 chr12 24642687 24643166 + processed_pseudogene KNOWN OTTHUMG00000157509.1 480 480 1 ENSG00000255745.1 RP11-625L16.1 chr12 24704565 24774213 + lincRNA NOVEL OTTHUMG00000169029.1 69649 670 5 ENSG00000240481.3 RN7SL38P chr12 24706788 24707083 + misc_RNA KNOWN NA 296 296 1 ENSG00000060982.13 BCAT1 chr12 24810022 24949459 - protein_coding KNOWN OTTHUMG00000169053.3 139438 11775 75 ENSG00000256482.1 RP11-625L16.3 chr12 24830421 24836558 + antisense NOVEL OTTHUMG00000169054.1 6138 451 2 ENSG00000229724.1 OR2AQ1P chr1 158796014 158796213 + unprocessed_pseudogene KNOWN OTTHUMG00000022769.1 200 200 1 ENSG00000278969.1 RP11-662I13.3 chr12 24902309 24904681 + TEC KNOWN OTTHUMG00000187475.1 2373 2373 1 ENSG00000255921.1 RP11-662I13.2 chr12 24949163 24960158 + antisense NOVEL OTTHUMG00000169055.1 10996 728 4 ENSG00000213736.2 RP11-662I13.1 chr12 24967127 24967504 - processed_pseudogene KNOWN OTTHUMG00000169030.1 378 378 1 ENSG00000226397.6 C12orf77 chr12 24993424 24997519 - lincRNA KNOWN OTTHUMG00000170185.2 4096 2474 10 ENSG00000258879.1 RP11-713N11.5 chr12 25011415 25020893 + lincRNA NOVEL OTTHUMG00000170830.1 9479 559 5 ENSG00000118308.13 LRMP chr12 25021002 25108334 + protein_coding KNOWN OTTHUMG00000170192.14 87333 5159 219 ENSG00000258546.1 CENPUP2 chr12 25092715 25093900 - processed_pseudogene KNOWN OTTHUMG00000170823.1 1186 1186 1 ENSG00000258449.1 RP11-713N11.4 chr12 25096868 25100980 - antisense NOVEL OTTHUMG00000170824.1 4113 490 3 ENSG00000276842.1 RP11-713N11.6 chr12 25103124 25103869 - antisense NOVEL OTTHUMG00000187127.1 746 746 1 ENSG00000118307.17 CASC1 chr12 25108420 25195162 - protein_coding KNOWN OTTHUMG00000150195.6 86743 2952 141 ENSG00000180409.3 OR10AA1P chr1 158808399 158809335 - unprocessed_pseudogene KNOWN OTTHUMG00000022779.1 937 937 1 ENSG00000205707.9 LYRM5 chr12 25195216 25209645 + protein_coding KNOWN OTTHUMG00000171190.4 14430 2466 34 ENSG00000133703.10 KRAS chr12 25204789 25250936 - protein_coding KNOWN OTTHUMG00000171193.2 46148 7302 17 ENSG00000274987.1 RP11-295I5.3 chr12 25210652 25211233 + antisense NOVEL OTTHUMG00000187134.1 582 582 1 ENSG00000275197.1 RP11-295I5.4 chr12 25225103 25225665 + antisense NOVEL OTTHUMG00000187135.1 563 563 1 ENSG00000278743.1 RP11-707G18.1 chr12 25385670 25386241 - lincRNA NOVEL OTTHUMG00000187136.1 572 572 1 ENSG00000201439.1 RNU4-67P chr12 25404288 25404428 - snRNA KNOWN NA 141 141 1 ENSG00000241846.1 RP11-318G8.1 chr12 25409293 25409445 - processed_pseudogene KNOWN OTTHUMG00000157510.1 153 153 1 ENSG00000152936.9 LMNTD1 chr12 25409307 25648579 - protein_coding KNOWN OTTHUMG00000169052.2 239273 3083 72 ENSG00000279173.1 RP11-318G8.4 chr12 25423600 25424942 + TEC KNOWN OTTHUMG00000169110.1 1343 1343 1 ENSG00000256079.1 RP11-318G8.2 chr12 25435581 25436238 - processed_pseudogene KNOWN OTTHUMG00000169103.1 658 658 1 ENSG00000163563.7 MNDA chr1 158831317 158849506 + protein_coding KNOWN OTTHUMG00000022776.1 18190 2059 12 ENSG00000255988.1 TUBB4BP1 chr12 25440875 25441052 - processed_pseudogene KNOWN OTTHUMG00000169104.1 178 178 1 ENSG00000257009.1 RP11-685B13.2 chr12 25585994 25592928 - sense_intronic NOVEL OTTHUMG00000169105.1 6935 553 4 ENSG00000222950.1 RN7SKP262 chr12 25779287 25779569 - misc_RNA KNOWN NA 283 283 1 ENSG00000256686.1 RP11-443N24.2 chr12 25782706 25814171 - lincRNA NOVEL OTTHUMG00000169123.1 31466 772 3 ENSG00000255725.2 TDGP1 chr12 25803298 25804526 + processed_pseudogene KNOWN OTTHUMG00000169086.1 1229 1229 1 ENSG00000256440.1 RP11-443N24.3 chr12 25831416 25834182 - lincRNA NOVEL OTTHUMG00000169124.1 2767 373 2 ENSG00000256256.1 RP11-443N24.4 chr12 25882955 25885855 - lincRNA NOVEL OTTHUMG00000169125.1 2901 486 2 ENSG00000246695.6 RASSF8-AS1 chr12 25939329 25959765 - antisense NOVEL OTTHUMG00000169126.2 20437 3981 40 ENSG00000123094.14 RASSF8 chr12 25959029 26079892 + protein_coding KNOWN OTTHUMG00000169087.4 120864 7619 62 ENSG00000123095.5 BHLHE41 chr12 26120026 26125127 - protein_coding KNOWN OTTHUMG00000169174.1 5102 3948 10 ENSG00000229849.1 RP11-393K10.1 chr1 158878746 158883500 + unprocessed_pseudogene KNOWN OTTHUMG00000022771.2 4755 723 4 ENSG00000123096.10 SSPN chr12 26121991 26299290 + protein_coding KNOWN OTTHUMG00000169167.3 177300 6821 25 ENSG00000256894.1 RP11-283G6.3 chr12 26125155 26126617 - antisense NOVEL OTTHUMG00000169175.1 1463 826 6 ENSG00000256234.1 RP11-283G6.4 chr12 26211164 26335856 - antisense NOVEL OTTHUMG00000169176.1 124693 699 4 ENSG00000255750.4 RP11-283G6.5 chr12 26230819 26319720 - antisense NOVEL OTTHUMG00000169177.1 88902 1128 9 ENSG00000278095.1 RP11-283G6.6 chr12 26273329 26273900 - antisense NOVEL OTTHUMG00000187149.1 572 572 1 ENSG00000255858.1 RP11-612B6.1 chr12 26315715 26317813 + lincRNA NOVEL OTTHUMG00000169178.1 2099 475 2 ENSG00000255968.1 RP11-513G19.1 chr12 26318953 26421462 + antisense NOVEL OTTHUMG00000169179.1 102510 775 6 ENSG00000256185.1 RP11-612B6.2 chr12 26335864 26336950 - 3prime_overlapping_ncrna NOVEL OTTHUMG00000169180.1 1087 172 2 ENSG00000123104.10 ITPR2 chr12 26336515 26833198 - protein_coding KNOWN OTTHUMG00000169181.4 496684 12750 105 ENSG00000212549.1 RNA5SP354 chr12 26373598 26373733 - rRNA KNOWN NA 136 136 1 ENSG00000163564.13 PYHIN1 chr1 158930796 158977054 + protein_coding KNOWN OTTHUMG00000037109.1 46259 3479 47 ENSG00000234428.2 RP11-666F17.1 chr12 26623369 26649479 + antisense NOVEL OTTHUMG00000169229.1 26111 876 3 ENSG00000256640.1 RP11-666F17.2 chr12 26800843 26801302 + processed_pseudogene KNOWN OTTHUMG00000169230.1 460 460 1 ENSG00000064102.13 ASUN chr12 26905181 26938326 - protein_coding KNOWN OTTHUMG00000169193.4 33146 3345 55 ENSG00000111790.12 FGFR1OP2 chr12 26938383 26966650 + protein_coding KNOWN OTTHUMG00000169231.1 28268 5971 28 ENSG00000247903.1 RP11-421F16.3 chr12 26971586 26979582 + antisense NOVEL OTTHUMG00000169268.1 7997 2549 2 ENSG00000064115.9 TM7SF3 chr12 26973195 27014434 - protein_coding KNOWN OTTHUMG00000169243.7 41240 3888 91 ENSG00000280746.1 AC024896.1 chr12 26985934 26985985 - miRNA NOVEL NA 52 52 1 ENSG00000152944.7 MED21 chr12 27022546 27066343 + protein_coding KNOWN OTTHUMG00000169276.3 43798 3224 27 ENSG00000275764.1 RP11-582E3.6 chr12 27037100 27038960 + lincRNA NOVEL OTTHUMG00000187154.2 1861 1861 1 ENSG00000214700.5 C12orf71 chr12 27081058 27082514 - protein_coding KNOWN OTTHUMG00000169274.1 1457 957 2 ENSG00000163565.17 IFI16 chr1 158999968 159055155 + protein_coding KNOWN OTTHUMG00000037108.4 55188 5294 110 ENSG00000271418.1 RP11-582E3.5 chr12 27093923 27094223 - processed_pseudogene KNOWN OTTHUMG00000184732.1 301 301 1 ENSG00000256226.1 RP11-582E3.2 chr12 27105151 27161393 - lincRNA NOVEL OTTHUMG00000169275.1 56243 615 4 ENSG00000256625.1 RP11-582E3.4 chr12 27121910 27147664 + unprocessed_pseudogene KNOWN OTTHUMG00000169283.1 25755 983 8 ENSG00000211455.6 STK38L chr12 27243968 27325959 + protein_coding KNOWN OTTHUMG00000169284.1 81992 6921 76 ENSG00000029153.13 ARNTL2 chr12 27332854 27425289 + protein_coding KNOWN OTTHUMG00000169257.2 92436 6983 126 ENSG00000245311.2 ARNTL2-AS1 chr12 27389789 27446625 - antisense NOVEL OTTHUMG00000169258.1 56837 804 4 ENSG00000165935.8 SMCO2 chr12 27466810 27502185 + protein_coding KNOWN OTTHUMG00000169205.1 35376 1978 33 ENSG00000257037.1 RARSP1 chr12 27496937 27498589 + processed_pseudogene KNOWN OTTHUMG00000169206.1 1653 1418 2 ENSG00000110841.12 PPFIBP1 chr12 27523431 27695564 + protein_coding KNOWN OTTHUMG00000169207.2 172134 11690 197 ENSG00000248100.2 RP11-709A23.1 chr12 27547050 27552773 - lincRNA NOVEL OTTHUMG00000169208.1 5724 2639 2 ENSG00000265589.2 AL359753.1 chr1 159059237 159059326 + miRNA NOVEL NA 90 90 1 ENSG00000256056.1 RP11-709A23.2 chr12 27592461 27594039 - unprocessed_pseudogene KNOWN OTTHUMG00000169209.1 1579 928 2 ENSG00000256557.1 RP11-1060J15.3 chr12 27608733 27609046 - processed_pseudogene KNOWN OTTHUMG00000169210.1 314 314 1 ENSG00000256377.4 RP11-1060J15.4 chr12 27696388 27710770 - antisense NOVEL OTTHUMG00000169211.1 14383 1519 10 ENSG00000174236.3 REP15 chr12 27696519 27697596 + protein_coding KNOWN OTTHUMG00000169212.1 1078 1078 1 ENSG00000276261.1 RP11-1060J15.9 chr12 27700066 27700574 + antisense NOVEL OTTHUMG00000187164.1 509 509 1 ENSG00000230519.2 RP11-1060J15.5 chr12 27702338 27702906 + processed_pseudogene KNOWN OTTHUMG00000169213.1 569 569 1 ENSG00000256504.2 RP11-1060J15.7 chr12 27704568 27708365 + lincRNA NOVEL OTTHUMG00000169214.2 3798 429 2 ENSG00000061794.11 MRPS35 chr12 27710773 27756295 + protein_coding KNOWN OTTHUMG00000169215.1 45523 1979 30 ENSG00000252585.1 Y_RNA chr12 27752874 27752986 + misc_RNA NOVEL NA 113 113 1 ENSG00000205693.3 MANSC4 chr12 27762738 27771276 - protein_coding KNOWN OTTHUMG00000169216.2 8539 1023 3 ENSG00000163568.12 AIM2 chr1 159062484 159147096 - protein_coding KNOWN OTTHUMG00000037183.3 84613 2009 28 ENSG00000256747.1 RP11-860B13.1 chr12 27779821 27781067 - antisense NOVEL OTTHUMG00000169218.1 1247 679 2 ENSG00000087448.8 KLHL42 chr12 27780020 27803040 + protein_coding KNOWN OTTHUMG00000169217.1 23021 7622 11 ENSG00000256512.1 RP11-860B13.3 chr12 27798641 27800708 - antisense NOVEL OTTHUMG00000169219.1 2068 191 2 ENSG00000201612.1 RN7SKP15 chr12 27806082 27806390 - misc_RNA KNOWN NA 309 309 1 ENSG00000274075.1 uc_338 chr12 27824207 27824382 - misc_RNA NOVEL NA 176 176 1 ENSG00000256378.1 RP11-993B23.1 chr12 27935523 27935749 - unprocessed_pseudogene KNOWN OTTHUMG00000169220.1 227 227 1 ENSG00000087494.14 PTHLH chr12 27958084 27972705 - protein_coding KNOWN OTTHUMG00000169221.2 14622 3377 33 ENSG00000257042.1 RP11-993B23.3 chr12 27958517 27969813 + antisense NOVEL OTTHUMG00000169222.1 11297 792 2 ENSG00000123106.9 CCDC91 chr12 28133249 28581511 + protein_coding KNOWN OTTHUMG00000169141.2 448263 7535 163 ENSG00000247934.4 RP11-967K21.1 chr12 28163298 28190738 - antisense NOVEL OTTHUMG00000169142.2 27441 2728 5 ENSG00000142655.11 PEX14 chr1 10472288 10630758 + protein_coding KNOWN OTTHUMG00000001908.2 158471 2995 21 ENSG00000233473.2 RAD1P2 chr1 159081133 159081795 - processed_pseudogene KNOWN OTTHUMG00000037180.2 663 663 1 ENSG00000255951.1 RP11-967K21.2 chr12 28164958 28165662 + processed_pseudogene KNOWN OTTHUMG00000169143.1 705 554 2 ENSG00000278733.1 RP11-425D17.1 chr12 28185625 28186190 - antisense NOVEL OTTHUMG00000187167.1 566 566 1 ENSG00000273989.1 RP11-425D17.2 chr12 28236227 28236828 + sense_intronic NOVEL OTTHUMG00000187168.2 602 602 1 ENSG00000252237.1 RNU4-54P chr12 28319335 28319463 - snRNA KNOWN NA 129 129 1 ENSG00000202187.1 RNA5SP355 chr12 28505394 28505528 + rRNA KNOWN NA 135 135 1 ENSG00000244712.1 RP11-874G11.1 chr12 28564678 28565141 - processed_pseudogene KNOWN OTTHUMG00000157513.1 464 464 1 ENSG00000256513.1 RP11-977P2.1 chr12 28821975 28825831 - lincRNA NOVEL OTTHUMG00000169144.1 3857 433 2 ENSG00000278687.1 RP11-31A23.1 chr12 28978584 28978685 + processed_pseudogene KNOWN OTTHUMG00000187917.1 102 102 1 ENSG00000222481.1 AC012150.1 chr12 29120783 29120882 - miRNA NOVEL NA 100 100 1 ENSG00000257258.1 RP11-946L16.1 chr12 29143196 29148675 - lincRNA NOVEL OTTHUMG00000169319.1 5480 593 2 ENSG00000162706.11 CADM3 chr1 159171609 159203313 + protein_coding KNOWN OTTHUMG00000037177.1 31705 3847 26 ENSG00000064763.9 FAR2 chr12 29149103 29340980 + protein_coding KNOWN OTTHUMG00000169320.2 191878 5411 57 ENSG00000275278.1 RP11-946L16.2 chr12 29156448 29156991 - antisense NOVEL OTTHUMG00000187169.1 544 544 1 ENSG00000275476.1 RP11-996F15.4 chr12 29277397 29277882 - antisense NOVEL OTTHUMG00000187170.1 486 486 1 ENSG00000257176.2 RP11-996F15.2 chr12 29280418 29317848 - antisense NOVEL OTTHUMG00000169321.2 37431 2813 9 ENSG00000274315.1 RP11-996F15.5 chr12 29331434 29331936 - antisense NOVEL OTTHUMG00000187171.1 503 503 1 ENSG00000273680.1 RP11-996F15.6 chr12 29332733 29333383 - antisense NOVEL OTTHUMG00000187173.1 651 651 1 ENSG00000087502.16 ERGIC2 chr12 29337352 29381189 - protein_coding KNOWN OTTHUMG00000169322.1 43838 5826 90 ENSG00000257599.1 OVCH1-AS1 chr12 29389294 29487488 + antisense KNOWN OTTHUMG00000169323.1 98195 1841 7 ENSG00000187950.7 OVCH1 chr12 29412474 29497686 - protein_coding KNOWN OTTHUMG00000167741.2 85213 3958 36 ENSG00000133687.14 TMTC1 chr12 29500840 29784759 - protein_coding KNOWN OTTHUMG00000169324.1 283920 14636 117 ENSG00000222552.1 RNA5SP60 chr1 159178473 159178559 + rRNA KNOWN NA 87 87 1 ENSG00000257456.1 RP11-310I24.1 chr12 29519731 29529974 + antisense NOVEL OTTHUMG00000169325.1 10244 349 3 ENSG00000242986.2 RP11-1110J8.1 chr12 29658376 29658798 - processed_pseudogene KNOWN OTTHUMG00000157515.2 423 423 1 ENSG00000276431.1 RP11-776A13.4 chr12 30169881 30170091 - processed_pseudogene KNOWN OTTHUMG00000187916.1 211 211 1 ENSG00000257262.1 RP11-776A13.1 chr12 30200983 30217916 + lincRNA NOVEL OTTHUMG00000169331.1 16934 571 3 ENSG00000257756.4 RP11-776A13.3 chr12 30230779 30296707 - lincRNA NOVEL OTTHUMG00000169332.1 65929 1062 11 ENSG00000251781.1 RNA5SP356 chr12 30306431 30306524 - rRNA KNOWN NA 94 94 1 ENSG00000257932.1 RP11-155I9.1 chr12 30320834 30321617 + lincRNA NOVEL OTTHUMG00000169333.1 784 562 2 ENSG00000258202.1 RP11-776A13.2 chr12 30454919 30492302 + unprocessed_pseudogene KNOWN OTTHUMG00000169334.1 37384 419 3 ENSG00000133704.8 IPO8 chr12 30628988 30695986 - protein_coding KNOWN OTTHUMG00000169172.3 66999 6926 76 ENSG00000110888.16 CAPRIN2 chr12 30709552 30754951 - protein_coding KNOWN OTTHUMG00000169185.6 45400 8392 178 ENSG00000225670.4 CADM3-AS1 chr1 159194325 159207973 - antisense NOVEL OTTHUMG00000037178.4 13649 5208 6 ENSG00000246331.2 RP11-77I22.2 chr12 30755074 30780739 + lincRNA NOVEL OTTHUMG00000169308.1 25666 1552 2 ENSG00000235884.3 LINC00941 chr12 30795681 30802711 + lincRNA NOVEL OTTHUMG00000169309.1 7031 2218 9 ENSG00000258118.1 RP11-77I22.4 chr12 30861921 30862179 + processed_pseudogene KNOWN OTTHUMG00000169310.1 259 259 1 ENSG00000110900.13 TSPAN11 chr12 30926428 30996599 + protein_coding KNOWN OTTHUMG00000168484.1 70172 7113 25 ENSG00000226472.6 RP11-551L14.4 chr12 30978308 31006010 - antisense NOVEL OTTHUMG00000168485.4 27703 1975 20 ENSG00000256984.1 RP11-551L14.6 chr12 31012503 31015667 + lincRNA NOVEL OTTHUMG00000168486.1 3165 348 2 ENSG00000245614.3 DDX11-AS1 chr12 31020763 31073847 - antisense NOVEL OTTHUMG00000168487.3 53085 2581 7 ENSG00000013573.15 DDX11 chr12 31073845 31104791 + protein_coding KNOWN OTTHUMG00000168435.5 30947 8374 315 ENSG00000212533.1 SNORA75 chr12 31076867 31077016 - snoRNA NOVEL NA 150 150 1 ENSG00000270926.1 RP11-551L14.7 chr12 31105105 31106830 - unprocessed_pseudogene KNOWN OTTHUMG00000184735.1 1726 675 6 ENSG00000213088.8 ACKR1 chr1 159203307 159206500 + protein_coding KNOWN OTTHUMG00000037182.2 3194 2106 8 ENSG00000177359.16 RP11-551L14.1 chr12 31111652 31206154 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000165051.2 94503 5460 52 ENSG00000270766.1 RP11-627K11.5 chr12 31244440 31244685 + processed_pseudogene KNOWN OTTHUMG00000184765.1 246 246 1 ENSG00000243517.1 RP11-627K11.1 chr12 31251992 31252597 - processed_pseudogene KNOWN OTTHUMG00000157517.1 606 606 1 ENSG00000270395.1 MREGP1 chr12 31254361 31254445 - processed_pseudogene KNOWN OTTHUMG00000184737.1 85 85 1 ENSG00000275097.1 RP11-627K11.6 chr12 31280422 31280895 - 3prime_overlapping_ncrna NOVEL OTTHUMG00000187191.1 474 474 1 ENSG00000139146.12 FAM60A chr12 31280584 31327058 - protein_coding KNOWN OTTHUMG00000168586.1 46475 5748 43 ENSG00000256176.1 RP11-627K11.3 chr12 31311617 31312029 + processed_pseudogene KNOWN OTTHUMG00000168587.1 413 316 2 ENSG00000177340.5 FLJ13224 chr12 31324316 31325829 + antisense NOVEL OTTHUMG00000187470.1 1514 1514 1 ENSG00000256232.1 RP11-771K4.1 chr12 31363481 31369301 - lincRNA NOVEL OTTHUMG00000169033.1 5821 868 2 ENSG00000170456.13 DENND5B chr12 31382223 31591097 - protein_coding KNOWN OTTHUMG00000169034.1 208875 11310 88 ENSG00000215846.6 MPTX1 chr1 159276503 159277111 + processed_pseudogene KNOWN OTTHUMG00000037179.1 609 609 1 ENSG00000200388.1 RNU6-618P chr12 31396390 31396501 + snRNA KNOWN NA 112 112 1 ENSG00000275769.1 RP11-771K4.3 chr12 31443792 31444208 - sense_intronic NOVEL OTTHUMG00000187200.1 417 417 1 ENSG00000203437.3 RP11-820K3.3 chr12 31465062 31465842 + processed_pseudogene KNOWN OTTHUMG00000169035.1 781 781 1 ENSG00000256159.1 RP11-820K3.4 chr12 31477506 31477987 + processed_pseudogene KNOWN OTTHUMG00000169036.1 482 482 1 ENSG00000201228.1 Y_RNA chr12 31506303 31506404 - misc_RNA NOVEL NA 102 102 1 ENSG00000225349.2 RP11-820K3.2 chr12 31534715 31535247 - processed_pseudogene KNOWN OTTHUMG00000169037.1 533 533 1 ENSG00000255867.1 DENND5B-AS1 chr12 31589923 31615666 + antisense NOVEL OTTHUMG00000169083.1 25744 1308 6 ENSG00000252390.1 RNU5F-4P chr12 31594093 31594206 - snRNA KNOWN NA 114 114 1 ENSG00000231788.4 RPL31P50 chr12 31597114 31597409 - processed_pseudogene KNOWN OTTHUMG00000157525.2 296 296 1 ENSG00000233381.3 AK4P3 chr12 31615771 31616439 - processed_pseudogene KNOWN OTTHUMG00000169084.1 669 669 1 ENSG00000248642.1 OR10J2P chr1 159279041 159280001 - unprocessed_pseudogene KNOWN OTTHUMG00000037175.1 961 961 1 ENSG00000139160.12 METTL20 chr12 31647160 31673114 + protein_coding KNOWN OTTHUMG00000169085.1 25955 6868 21 ENSG00000151743.9 AMN1 chr12 31671137 31729174 - protein_coding KNOWN OTTHUMG00000169192.2 58038 3195 73 ENSG00000266482.1 AC023157.1 chr12 31713750 31713848 + miRNA NOVEL NA 99 99 1 ENSG00000276058.1 STMN1P1 chr12 31715342 31715781 - processed_pseudogene KNOWN OTTHUMG00000186659.1 440 440 1 ENSG00000276900.1 RP11-467L13.7 chr12 31729117 31731204 + antisense NOVEL OTTHUMG00000187205.1 2088 2088 1 ENSG00000256843.1 RP11-467L13.4 chr12 31748100 31748240 - processed_pseudogene KNOWN OTTHUMG00000169237.2 141 141 1 ENSG00000223722.3 RP11-467L13.5 chr12 31754720 31755121 + processed_pseudogene KNOWN OTTHUMG00000169238.1 402 402 1 ENSG00000188375.4 H3F3C chr12 31791185 31792241 - protein_coding KNOWN OTTHUMG00000157811.1 1057 1057 1 ENSG00000252421.1 RNU6-1069P chr12 31802958 31803090 - snRNA KNOWN NA 133 133 1 ENSG00000252204.1 SNORA25 chr12 31811088 31811190 + snoRNA NOVEL NA 103 103 1 ENSG00000179639.9 FCER1A chr1 159289714 159308224 + protein_coding KNOWN OTTHUMG00000037176.2 18511 1165 11 ENSG00000256372.1 RP11-428G5.4 chr12 31853021 31853407 - processed_pseudogene KNOWN OTTHUMG00000169239.1 387 387 1 ENSG00000255760.1 RP11-428G5.5 chr12 31877079 31887203 - lincRNA NOVEL OTTHUMG00000169240.1 10125 852 2 ENSG00000256465.1 RP11-428G5.6 chr12 31893370 31893702 + processed_pseudogene KNOWN OTTHUMG00000169241.1 333 333 1 ENSG00000244436.2 RP11-428G5.1 chr12 31897820 31898123 + processed_pseudogene KNOWN OTTHUMG00000157527.2 304 304 1 ENSG00000252584.1 AC023050.1 chr12 31915636 31915707 - miRNA NOVEL NA 72 72 1 ENSG00000242314.1 RP11-428G5.2 chr12 31948334 31948827 + processed_pseudogene KNOWN OTTHUMG00000157529.1 494 494 1 ENSG00000256987.1 RP11-428G5.7 chr12 31953889 31955268 + processed_pseudogene KNOWN OTTHUMG00000169242.1 1380 1380 1 ENSG00000174718.10 KIAA1551 chr12 31959370 31993107 + protein_coding KNOWN OTTHUMG00000128501.3 33738 6646 29 ENSG00000276136.1 RP11-50I19.2 chr12 32000375 32001222 + lincRNA NOVEL OTTHUMG00000187207.1 848 848 1 ENSG00000257094.1 RP11-50I19.1 chr12 32007127 32007435 + processed_pseudogene KNOWN OTTHUMG00000169292.1 309 309 1 ENSG00000196266.4 OR10J3 chr1 159313670 159314659 - protein_coding KNOWN OTTHUMG00000037233.1 990 990 1 ENSG00000257852.1 RP11-843B15.1 chr12 32072734 32072880 + processed_pseudogene KNOWN OTTHUMG00000169305.1 147 147 1 ENSG00000271357.1 RP11-843B15.3 chr12 32100485 32100735 - processed_pseudogene KNOWN OTTHUMG00000184740.1 251 251 1 ENSG00000257530.1 RP11-843B15.2 chr12 32104117 32107528 - antisense NOVEL OTTHUMG00000169306.1 3412 407 3 ENSG00000151746.12 BICD1 chr12 32106835 32383633 + protein_coding KNOWN OTTHUMG00000169307.5 276799 12868 42 ENSG00000277342.1 RP11-843B15.4 chr12 32109076 32109602 + sense_intronic NOVEL OTTHUMG00000187209.1 527 527 1 ENSG00000258134.1 RP11-956A19.1 chr12 32227410 32228154 - processed_pseudogene KNOWN OTTHUMG00000169405.1 745 745 1 ENSG00000274964.1 RP11-817I4.1 chr12 32339368 32340724 + sense_intronic NOVEL OTTHUMG00000187236.2 1357 1357 1 ENSG00000276115.1 RP11-817I4.2 chr12 32352349 32354144 + sense_intronic NOVEL OTTHUMG00000187242.2 1796 1796 1 ENSG00000207176.1 Y_RNA chr12 32396050 32396147 - misc_RNA NOVEL NA 98 98 1 ENSG00000139132.13 FGD4 chr12 32399529 32646050 + protein_coding KNOWN OTTHUMG00000137374.5 246522 10629 181 ENSG00000228560.1 RP11-550P17.5 chr1 159346166 159469068 - antisense NOVEL OTTHUMG00000037230.1 122903 1063 4 ENSG00000253063.1 RNU6-494P chr12 32477382 32477471 - snRNA KNOWN NA 90 90 1 ENSG00000087470.16 DNM1L chr12 32679200 32745650 + protein_coding KNOWN OTTHUMG00000169451.1 66451 7282 287 ENSG00000257643.1 RP11-278C7.2 chr12 32692504 32692848 - processed_pseudogene KNOWN OTTHUMG00000169452.1 345 345 1 ENSG00000201563.1 Y_RNA chr12 32705403 32705506 - misc_RNA NOVEL NA 104 104 1 ENSG00000276148.1 RP11-278C7.4 chr12 32725248 32725660 - antisense NOVEL OTTHUMG00000187261.1 413 413 1 ENSG00000257511.1 RP11-278C7.1 chr12 32726383 32727387 - processed_pseudogene KNOWN OTTHUMG00000169453.1 1005 1005 1 ENSG00000139131.11 YARS2 chr12 32727490 32755902 - protein_coding KNOWN OTTHUMG00000169454.2 28413 2152 13 ENSG00000274105.1 RP11-278C7.3 chr12 32728169 32729024 - sense_intronic NOVEL OTTHUMG00000187255.1 856 856 1 ENSG00000275854.1 RP11-278C7.5 chr12 32736930 32737660 - sense_intronic NOVEL OTTHUMG00000187264.1 731 731 1 ENSG00000057294.12 PKP2 chr12 32790745 32896840 - protein_coding KNOWN OTTHUMG00000169500.3 106096 7043 54 ENSG00000243267.3 RN7SL614P chr1 10616836 10617115 + misc_RNA KNOWN NA 280 280 1 ENSG00000248442.2 OR10J7P chr1 159351093 159352026 + unitary_pseudogene KNOWN OTTHUMG00000037231.2 934 934 1 ENSG00000274976.1 RP11-8P13.5 chr12 32820142 32820567 - sense_intronic NOVEL OTTHUMG00000187269.1 426 426 1 ENSG00000244743.1 RP11-8P13.1 chr12 32863118 32863433 + processed_pseudogene KNOWN OTTHUMG00000157531.1 316 316 1 ENSG00000257316.1 RP11-267D19.2 chr12 32985838 32987070 + processed_pseudogene KNOWN OTTHUMG00000169504.1 1233 1233 1 ENSG00000257435.1 RP11-267D19.1 chr12 32988763 32993754 + lincRNA NOVEL OTTHUMG00000169505.1 4992 320 2 ENSG00000238911.1 AC026357.1 chr12 33041725 33041821 - miRNA NOVEL NA 97 97 1 ENSG00000110975.7 SYT10 chr12 33374238 33439819 - protein_coding KNOWN OTTHUMG00000169269.2 65582 5082 18 ENSG00000259937.2 RP11-438D14.2 chr12 33404872 33405896 - sense_intronic NOVEL OTTHUMG00000176816.2 1025 1025 1 ENSG00000281105.1 AC023158.1 chr12 33412530 33412611 - miRNA NOVEL NA 82 82 1 ENSG00000273853.1 RP11-438D14.3 chr12 33432311 33432853 - sense_intronic NOVEL OTTHUMG00000187274.1 543 543 1 ENSG00000256070.1 RP11-56H16.1 chr12 33454345 33455452 + processed_pseudogene KNOWN OTTHUMG00000169270.1 1108 1108 1 ENSG00000251686.1 OR10J8P chr1 159366161 159367089 + unprocessed_pseudogene KNOWN OTTHUMG00000037229.1 929 929 1 ENSG00000212475.1 RNU6-400P chr12 33576095 33576200 + snRNA KNOWN NA 106 106 1 ENSG00000270807.1 RP13-359K18.1 chr12 33717853 33718217 + processed_pseudogene KNOWN OTTHUMG00000184762.1 365 365 1 ENSG00000207026.1 RNU6-472P chr12 33923374 33923480 - snRNA KNOWN NA 107 107 1 ENSG00000201624.1 Y_RNA chr12 33982465 33982566 - misc_RNA NOVEL NA 102 102 1 ENSG00000139133.5 ALG10 chr12 34022281 34029694 + protein_coding KNOWN OTTHUMG00000169285.2 7414 4389 11 ENSG00000245482.2 RP11-847H18.2 chr12 34022281 34046417 - antisense NOVEL OTTHUMG00000169286.1 24137 2179 2 ENSG00000264446.1 AC046130.1 chr12 34027268 34027362 - miRNA NOVEL NA 95 95 1 ENSG00000256538.1 RP11-847H18.3 chr12 34037438 34056740 + lincRNA NOVEL OTTHUMG00000169287.1 19303 794 3 ENSG00000255628.1 RP11-313F23.3 chr12 34149839 34162238 + lincRNA NOVEL OTTHUMG00000169288.1 12400 534 3 ENSG00000256986.1 RP11-313F23.2 chr12 34162462 34162968 + processed_pseudogene KNOWN OTTHUMG00000169289.1 507 507 1 ENSG00000249197.1 OR10J9P chr1 159405423 159406409 - unprocessed_pseudogene KNOWN OTTHUMG00000037232.1 987 987 1 ENSG00000250788.1 TUBB8P4 chr12 34164773 34166954 - unprocessed_pseudogene KNOWN OTTHUMG00000163440.1 2182 1324 4 ENSG00000255652.2 RP11-313F23.4 chr12 34191037 34218853 - lincRNA NOVEL OTTHUMG00000169290.2 27817 743 4 ENSG00000272435.1 5S_rRNA chr12 34205699 34205817 + rRNA NOVEL NA 119 119 1 ENSG00000258794.3 DUX4L27 chr12 34208415 34209675 - transcribed_processed_pseudogene KNOWN OTTHUMG00000170996.3 1261 1261 1 ENSG00000256614.1 RP13-7D7.1 chr12 34249481 34249958 + processed_pseudogene KNOWN OTTHUMG00000169291.1 478 478 1 ENSG00000257794.1 RP11-125N22.4 chr12 37542012 37542386 - processed_pseudogene KNOWN OTTHUMG00000169413.1 375 375 1 ENSG00000257899.1 RP11-125N22.3 chr12 37544285 37544584 - processed_pseudogene KNOWN OTTHUMG00000169414.1 300 300 1 ENSG00000257933.1 RP11-125N22.1 chr12 37544607 37544798 + processed_pseudogene KNOWN OTTHUMG00000169294.1 192 192 1 ENSG00000258368.1 RP11-125N22.2 chr12 37575449 37576384 + unprocessed_pseudogene KNOWN OTTHUMG00000169295.1 936 401 2 ENSG00000257173.1 RP11-297L6.2 chr12 38078529 38078999 - processed_pseudogene KNOWN OTTHUMG00000169296.1 471 471 1 ENSG00000249730.1 OR10J4 chr1 159432204 159433138 + polymorphic_pseudogene KNOWN OTTHUMG00000022740.2 935 935 1 ENSG00000258278.1 RP11-297L6.1 chr12 38082046 38084082 + unprocessed_pseudogene KNOWN OTTHUMG00000169297.1 2037 577 4 ENSG00000274293.1 pRNA chr12 38150050 38150138 + misc_RNA NOVEL NA 89 89 1 ENSG00000199843.1 RNA5SP358 chr12 38161466 38161582 - rRNA KNOWN NA 117 117 1 ENSG00000201708.1 RNA5SP359 chr12 38163403 38163515 - rRNA KNOWN NA 113 113 1 ENSG00000254381.3 TUBB8P5 chr12 38201566 38203792 + unprocessed_pseudogene KNOWN OTTHUMG00000169395.1 2227 1351 4 ENSG00000257292.1 RP11-266O15.4 chr12 38205386 38206012 - processed_pseudogene KNOWN OTTHUMG00000169415.1 627 627 1 ENSG00000258360.1 RP11-266O15.3 chr12 38206231 38207192 - unprocessed_pseudogene KNOWN OTTHUMG00000169416.1 962 583 2 ENSG00000253016.1 Y_RNA chr12 38274448 38274549 - misc_RNA NOVEL NA 102 102 1 ENSG00000175548.7 ALG10B chr12 38316578 38329728 + protein_coding KNOWN OTTHUMG00000169298.5 13151 11449 11 ENSG00000266333.1 AC117372.1 chr12 38321566 38321660 - miRNA NOVEL NA 95 95 1 ENSG00000196184.8 OR10J1 chr1 159439722 159440811 + protein_coding KNOWN OTTHUMG00000022737.2 1090 1090 1 ENSG00000281888.1 AC087897.1 chr12 38520233 38520301 + miRNA NOVEL NA 69 69 1 ENSG00000257645.1 RP11-804F13.2 chr12 38532895 38533050 - processed_pseudogene KNOWN OTTHUMG00000169417.1 156 156 1 ENSG00000258119.1 RP11-804F13.1 chr12 38544177 38589812 - lincRNA NOVEL OTTHUMG00000169418.1 45636 723 6 ENSG00000139117.12 CPNE8 chr12 38646822 38907430 - protein_coding KNOWN OTTHUMG00000169396.1 260609 5178 77 ENSG00000257718.1 RP11-396F22.1 chr12 38906451 38909592 + antisense NOVEL OTTHUMG00000169406.1 3142 526 2 ENSG00000252801.2 AC067735.1 chr12 38913240 38913326 - miRNA NOVEL NA 87 87 1 ENSG00000257586.1 RP11-554L12.3 chr12 38994803 38996882 - unprocessed_pseudogene KNOWN OTTHUMG00000169407.1 2080 305 2 ENSG00000257237.1 RP11-554L12.2 chr12 39058028 39059933 - unprocessed_pseudogene KNOWN OTTHUMG00000169408.1 1906 316 3 ENSG00000258144.1 RP11-554L12.1 chr12 39087713 39092874 - lincRNA NOVEL OTTHUMG00000169409.1 5162 546 3 ENSG00000270718.1 RP11-421H10.2 chr12 39170646 39170880 + processed_pseudogene KNOWN OTTHUMG00000184760.1 235 235 1 ENSG00000224943.1 RP11-180D21.3 chr1 159466321 159483376 + lincRNA NOVEL OTTHUMG00000022736.1 17056 853 3 ENSG00000139116.16 KIF21A chr12 39293228 39443390 - protein_coding KNOWN OTTHUMG00000169335.1 150163 10114 223 ENSG00000252974.1 AC121334.1 chr12 39443048 39443116 - miRNA NOVEL NA 69 69 1 ENSG00000255991.2 RP11-242C24.2 chr12 39466442 39467345 - processed_pseudogene KNOWN OTTHUMG00000169336.1 904 802 2 ENSG00000270273.1 RP11-242C24.3 chr12 39539581 39539851 - processed_pseudogene KNOWN OTTHUMG00000184742.1 271 271 1 ENSG00000173208.3 ABCD2 chr12 39550033 39619751 - protein_coding KNOWN OTTHUMG00000169337.1 69719 6238 10 ENSG00000180116.14 C12orf40 chr12 39626167 39908300 + protein_coding KNOWN OTTHUMG00000133567.4 282134 4454 43 ENSG00000151229.11 SLC2A13 chr12 39755021 40106089 - protein_coding KNOWN OTTHUMG00000059743.3 351069 10027 19 ENSG00000223082.1 AC121336.1 chr12 39807095 39807174 - miRNA NOVEL NA 80 80 1 ENSG00000199571.1 SNORA22 chr12 39819750 39819883 - snoRNA NOVEL NA 134 134 1 ENSG00000229014.3 RPL30P13 chr12 40068243 40068590 - processed_pseudogene KNOWN OTTHUMG00000059744.3 348 348 1 ENSG00000184155.8 OR10J5 chr1 159535078 159536007 - protein_coding KNOWN OTTHUMG00000022738.1 930 930 1 ENSG00000260943.1 RP11-476D10.1 chr12 40140926 40142876 - lincRNA NOVEL OTTHUMG00000172895.1 1951 1951 1 ENSG00000223914.1 AC079630.2 chr12 40156239 40167707 + lincRNA NOVEL OTTHUMG00000059745.2 11469 664 4 ENSG00000225342.2 AC079630.4 chr12 40186009 40224915 - antisense NOVEL OTTHUMG00000133699.2 38907 2280 5 ENSG00000188906.12 LRRK2 chr12 40196744 40369285 + protein_coding KNOWN OTTHUMG00000059742.8 172542 13465 155 ENSG00000229899.1 AC084290.2 chr12 40286289 40286662 + processed_pseudogene KNOWN OTTHUMG00000059907.1 374 374 1 ENSG00000205592.12 MUC19 chr12 40393395 40570832 + processed_transcript KNOWN OTTHUMG00000060732.34 177438 29490 269 ENSG00000258167.1 RP11-115F18.1 chr12 40395853 40443847 - antisense NOVEL OTTHUMG00000169361.1 47995 356 4 ENSG00000207492.1 RNU6-713P chr12 40554161 40554267 - snRNA KNOWN NA 107 107 1 ENSG00000018236.13 CNTN1 chr12 40692442 41072418 + protein_coding KNOWN OTTHUMG00000169362.2 379977 7492 131 ENSG00000257680.1 RP11-367O10.1 chr12 40728811 40729897 + processed_pseudogene KNOWN OTTHUMG00000169363.1 1087 1087 1 ENSG00000231100.1 RP11-740C1.2 chr1 159557368 159558200 + unprocessed_pseudogene KNOWN OTTHUMG00000022739.1 833 666 2 ENSG00000274682.1 RP11-385G16.1 chr12 40978744 40979244 + sense_intronic NOVEL OTTHUMG00000187308.1 501 501 1 ENSG00000165966.13 PDZRN4 chr12 41188448 41574590 + protein_coding KNOWN OTTHUMG00000169364.1 386143 4586 34 ENSG00000257228.4 RP11-413B19.2 chr12 41409467 41473510 - antisense NOVEL OTTHUMG00000169365.1 64044 1274 8 ENSG00000252364.1 RNA5SP360 chr12 41658676 41658793 + rRNA KNOWN NA 118 118 1 ENSG00000258239.1 MTND2P17 chr12 41698495 41699182 - unprocessed_pseudogene KNOWN OTTHUMG00000169366.1 688 688 1 ENSG00000257858.1 MTND1P24 chr12 41699391 41700251 - unprocessed_pseudogene KNOWN OTTHUMG00000169367.1 861 861 1 ENSG00000257784.1 RP11-630C16.1 chr12 41764189 41765581 + lincRNA NOVEL OTTHUMG00000169376.1 1393 408 5 ENSG00000257239.1 RP11-630C16.2 chr12 41829898 41932592 - lincRNA NOVEL OTTHUMG00000169377.1 102695 499 2 ENSG00000257128.1 RP11-2A1.1 chr12 41911256 41912212 + processed_pseudogene KNOWN OTTHUMG00000169378.1 957 465 2 ENSG00000271379.1 RP11-440G2.2 chr12 42069935 42070625 - processed_pseudogene KNOWN OTTHUMG00000184792.1 691 691 1 ENSG00000271890.1 OR10AE1P chr1 159581620 159582648 - unprocessed_pseudogene KNOWN OTTHUMG00000185685.1 1029 1029 1 ENSG00000222884.1 AC023513.1 chr12 42079761 42079882 + miRNA NOVEL NA 122 122 1 ENSG00000151233.9 GXYLT1 chr12 42081845 42144879 - protein_coding KNOWN OTTHUMG00000169379.1 63035 7497 15 ENSG00000015153.13 YAF2 chr12 42157104 42238349 - protein_coding KNOWN OTTHUMG00000169380.3 81246 10839 73 ENSG00000134283.16 PPHLN1 chr12 42238447 42459715 + protein_coding KNOWN OTTHUMG00000169440.2 221269 12155 202 ENSG00000257674.1 RP11-76E16.2 chr12 42286911 42288560 + processed_pseudogene KNOWN OTTHUMG00000169441.1 1650 1650 1 ENSG00000139168.6 ZCRB1 chr12 42312078 42326118 - protein_coding KNOWN OTTHUMG00000169382.1 14041 2446 26 ENSG00000278520.1 MIR7851 chr12 42323700 42323859 - miRNA KNOWN NA 160 160 1 ENSG00000252917.1 SNORA74 chr12 42347061 42347214 - snoRNA NOVEL NA 154 154 1 ENSG00000274943.1 RP11-351C21.2 chr12 42361267 42361703 + sense_intronic NOVEL OTTHUMG00000187314.2 437 437 1 ENSG00000199886.1 RNU6-249P chr12 42398550 42398651 + snRNA KNOWN NA 102 102 1 ENSG00000132703.3 APCS chr1 159587825 159588865 + protein_coding KNOWN OTTHUMG00000022741.2 1041 926 2 ENSG00000257376.1 RP11-328C8.2 chr12 42431665 42433357 - processed_pseudogene KNOWN OTTHUMG00000169442.1 1693 775 3 ENSG00000207142.1 Y_RNA chr12 42454720 42454821 + misc_RNA NOVEL NA 102 102 1 ENSG00000139174.9 PRICKLE1 chr12 42456754 42590355 - protein_coding KNOWN OTTHUMG00000169443.2 133602 6785 55 ENSG00000257225.1 RP11-328C8.4 chr12 42459366 42466128 + antisense NOVEL OTTHUMG00000169444.1 6763 2791 2 ENSG00000258068.1 RP11-328C8.5 chr12 42485353 42490019 - sense_intronic NOVEL OTTHUMG00000169456.1 4667 447 2 ENSG00000257510.1 RP11-609L23.1 chr12 42615503 42646498 - lincRNA NOVEL OTTHUMG00000169457.2 30996 1212 6 ENSG00000257687.1 RP11-609L23.3 chr12 42627008 42627137 - processed_pseudogene KNOWN OTTHUMG00000169458.1 130 130 1 ENSG00000257405.1 RP11-609L23.2 chr12 42636815 42637111 - processed_pseudogene KNOWN OTTHUMG00000169459.1 297 297 1 ENSG00000257164.4 RP11-25I15.2 chr12 42646583 42686701 + lincRNA NOVEL OTTHUMG00000169347.1 40119 811 10 ENSG00000240759.1 RP11-25I15.1 chr12 42678873 42679124 - processed_pseudogene KNOWN OTTHUMG00000157540.1 252 252 1 ENSG00000130940.13 CASZ1 chr1 10636604 10796650 - protein_coding KNOWN OTTHUMG00000002035.4 160047 11336 61 ENSG00000158731.2 OR10J6P chr1 159598298 159599227 + unprocessed_pseudogene KNOWN OTTHUMG00000035346.1 930 930 1 ENSG00000257114.2 RP11-25I15.3 chr12 42692216 42717119 + lincRNA NOVEL OTTHUMG00000169348.2 24904 1003 4 ENSG00000271272.1 RP11-510P12.1 chr12 42929848 42930579 - processed_pseudogene KNOWN OTTHUMG00000184794.1 732 732 1 ENSG00000257849.1 RP11-547C5.1 chr12 42966122 42967353 + lincRNA NOVEL OTTHUMG00000169349.1 1232 256 2 ENSG00000257373.1 RP11-547C5.2 chr12 42979254 42996486 - lincRNA NOVEL OTTHUMG00000169350.1 17233 552 3 ENSG00000257927.1 MRPS36P5 chr12 43054089 43054386 - processed_pseudogene KNOWN OTTHUMG00000169351.1 298 298 1 ENSG00000258331.1 RP11-118A3.1 chr12 43155315 43163110 + lincRNA NOVEL OTTHUMG00000169352.1 7796 836 4 ENSG00000215993.1 AC079603.1 chr12 43291495 43291580 - miRNA NOVEL NA 86 86 1 ENSG00000264437.2 AC107018.1 chr12 43318999 43319078 - miRNA NOVEL NA 80 80 1 ENSG00000173157.15 ADAMTS20 chr12 43353866 43551921 - protein_coding KNOWN OTTHUMG00000169353.1 198056 7242 108 ENSG00000265012.2 AC120104.1 chr12 43416635 43416686 - miRNA NOVEL NA 52 52 1 ENSG00000276632.1 RP11-419N10.6 chr1 159649151 159649620 + processed_pseudogene KNOWN OTTHUMG00000187537.1 470 470 1 ENSG00000241251.2 RP11-73B8.1 chr12 43560784 43561297 - processed_pseudogene KNOWN OTTHUMG00000157550.2 514 478 2 ENSG00000257813.2 RP11-73B8.2 chr12 43569769 43572038 - processed_pseudogene KNOWN OTTHUMG00000169354.2 2270 2270 1 ENSG00000271508.1 RP11-73B8.3 chr12 43633093 43633281 + processed_pseudogene KNOWN OTTHUMG00000184759.1 189 189 1 ENSG00000257907.2 EEF1A1P17 chr12 43659827 43661101 + processed_pseudogene KNOWN OTTHUMG00000169355.2 1275 1275 1 ENSG00000129317.13 PUS7L chr12 43718993 43758817 - protein_coding KNOWN OTTHUMG00000169423.2 39825 14037 54 ENSG00000257896.1 RP11-210N13.1 chr12 43736628 43741067 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000169424.1 4440 1170 9 ENSG00000198001.12 IRAK4 chr12 43758944 43789543 + protein_coding KNOWN OTTHUMG00000169425.2 30600 5629 131 ENSG00000151239.12 TWF1 chr12 43793723 43806375 - protein_coding KNOWN OTTHUMG00000169426.1 12653 3932 72 ENSG00000139173.8 TMEM117 chr12 43835967 44389762 + protein_coding KNOWN OTTHUMG00000169427.2 553796 3440 44 ENSG00000265029.2 AC076972.1 chr12 43983468 43983547 - miRNA NOVEL NA 80 80 1 ENSG00000223603.1 CRPP1 chr1 159704983 159705607 - unprocessed_pseudogene KNOWN OTTHUMG00000035345.1 625 625 1 ENSG00000258212.1 RP11-624G19.1 chr12 44008620 44010143 - processed_pseudogene KNOWN OTTHUMG00000169428.1 1524 1524 1 ENSG00000257947.1 RP11-46I1.1 chr12 44244394 44263982 - antisense NOVEL OTTHUMG00000169429.1 19589 567 2 ENSG00000257864.1 RP11-46I1.2 chr12 44248432 44249004 - processed_pseudogene KNOWN OTTHUMG00000169430.1 573 573 1 ENSG00000275286.1 RP11-499A10.3 chr12 44498616 44499158 - lincRNA NOVEL OTTHUMG00000187335.1 543 543 1 ENSG00000184613.9 NELL2 chr12 44508275 44921848 - protein_coding KNOWN OTTHUMG00000169464.1 413574 6424 208 ENSG00000201788.1 Y_RNA chr12 44880868 44880969 - misc_RNA NOVEL NA 102 102 1 ENSG00000185610.6 DBX2 chr12 45014672 45051099 - protein_coding KNOWN OTTHUMG00000169559.1 36428 2806 4 ENSG00000257319.1 RP11-478B9.1 chr12 45050901 45103107 + antisense NOVEL OTTHUMG00000169560.1 52207 499 2 ENSG00000257331.1 RP11-478B9.3 chr12 45063473 45065351 - processed_pseudogene KNOWN OTTHUMG00000169561.1 1879 1879 1 ENSG00000257572.1 RP11-478B9.2 chr12 45071769 45072843 + processed_pseudogene KNOWN OTTHUMG00000169562.1 1075 1075 1 ENSG00000132693.11 CRP chr1 159712289 159714589 - protein_coding KNOWN OTTHUMG00000035344.1 2301 2015 21 ENSG00000199556.1 RNA5SP361 chr12 45117771 45117888 + rRNA KNOWN NA 118 118 1 ENSG00000134297.6 PLEKHA8P1 chr12 45173064 45216041 - transcribed_processed_pseudogene KNOWN OTTHUMG00000168776.2 42978 2320 9 ENSG00000257738.2 RP11-139E19.2 chr12 45200817 45201551 + processed_pseudogene KNOWN OTTHUMG00000169563.2 735 735 1 ENSG00000177119.14 ANO6 chr12 45215987 45440404 + protein_coding KNOWN OTTHUMG00000169564.1 224418 8235 106 ENSG00000278351.1 RP11-139E19.3 chr12 45256473 45256726 + sense_intronic NOVEL OTTHUMG00000187338.1 254 254 1 ENSG00000257368.2 RP11-438E8.2 chr12 45444766 45445438 + processed_pseudogene KNOWN OTTHUMG00000169565.2 673 673 1 ENSG00000257657.2 RP11-352M15.1 chr12 45481871 45610620 - lincRNA NOVEL OTTHUMG00000169469.2 128750 1120 7 ENSG00000273015.2 RP11-352M15.2 chr12 45718046 45727775 - lincRNA NOVEL OTTHUMG00000185943.2 9730 9730 1 ENSG00000189079.14 ARID2 chr12 45729665 45908040 + protein_coding KNOWN OTTHUMG00000150487.4 178376 12127 91 ENSG00000278475.1 RP11-19E18.2 chr12 45789189 45789657 + sense_intronic NOVEL OTTHUMG00000187352.1 469 469 1 ENSG00000235226.1 RP11-419N10.5 chr1 159759170 159759589 + processed_pseudogene KNOWN OTTHUMG00000035347.1 420 420 1 ENSG00000265093.2 RN7SL246P chr12 45874035 45874330 + misc_RNA KNOWN NA 296 296 1 ENSG00000270429.1 KNOP1P2 chr12 45880950 45882266 - processed_pseudogene KNOWN OTTHUMG00000184793.1 1317 1317 1 ENSG00000139218.16 SCAF11 chr12 45919131 45992120 - protein_coding KNOWN OTTHUMG00000149930.7 72990 14035 79 ENSG00000239397.1 RP11-101K23.1 chr12 46004038 46004685 - processed_pseudogene KNOWN OTTHUMG00000157553.1 648 648 1 ENSG00000111371.14 SLC38A1 chr12 46183063 46270017 - protein_coding KNOWN OTTHUMG00000169470.2 86955 10015 126 ENSG00000274591.1 RP11-474P2.5 chr12 46239106 46239473 - sense_intronic NOVEL OTTHUMG00000187358.1 368 368 1 ENSG00000134294.12 SLC38A2 chr12 46358189 46372867 - protein_coding KNOWN OTTHUMG00000169471.1 14679 6602 96 ENSG00000258096.1 RP11-474P2.2 chr12 46371463 46373778 + antisense NOVEL OTTHUMG00000169472.1 2316 627 2 ENSG00000257261.4 RP11-96H19.1 chr12 46383679 46876159 + lincRNA NOVEL OTTHUMG00000169473.2 492481 2227 8 ENSG00000257496.1 RP11-474P2.4 chr12 46384233 46386991 - lincRNA NOVEL OTTHUMG00000169474.1 2759 562 2 ENSG00000158716.7 DUSP23 chr1 159780932 159782543 + protein_coding KNOWN OTTHUMG00000022795.2 1612 825 8 ENSG00000275481.1 RP11-474P2.6 chr12 46388856 46392126 + lincRNA NOVEL OTTHUMG00000187428.1 3271 3271 1 ENSG00000278896.1 RP11-474P2.7 chr12 46404644 46407166 + TEC KNOWN OTTHUMG00000187429.1 2523 2523 1 ENSG00000272369.1 RP11-446N19.1 chr12 46537502 46652550 + lincRNA NOVEL OTTHUMG00000185793.1 115049 448 3 ENSG00000272963.1 OR7A19P chr12 46592573 46593305 + unprocessed_pseudogene KNOWN OTTHUMG00000185953.1 733 733 1 ENSG00000271642.1 MARK3P1 chr12 46682071 46682713 - processed_pseudogene KNOWN OTTHUMG00000184790.1 643 643 1 ENSG00000139209.14 SLC38A4 chr12 46764761 46832408 - protein_coding KNOWN OTTHUMG00000169518.3 67648 4145 52 ENSG00000274723.1 RP11-618L22.1 chr12 46970504 46972155 + lincRNA NOVEL OTTHUMG00000187438.1 1652 815 2 ENSG00000139211.6 AMIGO2 chr12 47075707 47079951 - protein_coding KNOWN OTTHUMG00000169616.1 4245 3956 8 ENSG00000179715.11 PCED1B chr12 47079603 47236662 + protein_coding KNOWN OTTHUMG00000169617.1 157060 2618 17 ENSG00000258352.1 RP11-23J18.1 chr12 47135498 47138370 - transcribed_processed_pseudogene KNOWN OTTHUMG00000169618.2 2873 603 3 ENSG00000181036.12 FCRL6 chr1 159800511 159816251 + protein_coding KNOWN OTTHUMG00000035351.4 15741 2671 52 ENSG00000263838.1 MIR4698 chr12 47187812 47187891 + miRNA KNOWN NA 80 80 1 ENSG00000247774.5 PCED1B-AS1 chr12 47205898 47216456 - processed_transcript NOVEL OTTHUMG00000169619.1 10559 3092 44 ENSG00000257925.1 RP11-493L12.3 chr12 47237734 47279021 - antisense NOVEL OTTHUMG00000169660.1 41288 663 2 ENSG00000258181.1 RP11-493L12.4 chr12 47248124 47257539 + lincRNA NOVEL OTTHUMG00000169661.1 9416 510 5 ENSG00000276454.1 RP11-493L12.7 chr12 47265665 47266108 + lincRNA NOVEL OTTHUMG00000187371.1 444 444 1 ENSG00000258116.1 RP11-493L12.6 chr12 47341614 47342089 - processed_pseudogene KNOWN OTTHUMG00000169662.1 476 476 1 ENSG00000199566.1 SNORA64 chr12 47346166 47346297 - snoRNA NOVEL NA 132 132 1 ENSG00000257924.1 RP11-493L12.5 chr12 47353754 47369935 + lincRNA NOVEL OTTHUMG00000169663.1 16182 540 3 ENSG00000264906.1 MIR4494 chr12 47364186 47364269 - miRNA KNOWN NA 84 84 1 ENSG00000257906.1 RP1-90J4.1 chr12 47415008 47420179 + lincRNA NOVEL OTTHUMG00000169664.1 5172 483 2 ENSG00000158714.9 SLAMF8 chr1 159826750 159837249 + protein_coding KNOWN OTTHUMG00000035433.1 10500 2996 17 ENSG00000258369.1 RP1-90J4.2 chr12 47463087 47463621 + processed_pseudogene KNOWN OTTHUMG00000169665.1 535 470 2 ENSG00000257807.1 RP1-90J4.3 chr12 47484689 47485722 + processed_pseudogene KNOWN OTTHUMG00000169666.1 1034 1034 1 ENSG00000257905.1 RP3-432I18.1 chr12 47593208 47593440 + processed_pseudogene KNOWN OTTHUMG00000169667.1 233 233 1 ENSG00000005175.8 RPAP3 chr12 47661249 47706061 - protein_coding KNOWN OTTHUMG00000169668.2 44813 5381 59 ENSG00000276390.1 RP1-197B17.5 chr12 47699401 47699917 - sense_intronic NOVEL OTTHUMG00000187397.1 517 517 1 ENSG00000257433.4 RP1-197B17.3 chr12 47706085 47742294 + antisense NOVEL OTTHUMG00000169669.2 36210 4411 16 ENSG00000111405.7 ENDOU chr12 47709734 47725567 - protein_coding KNOWN OTTHUMG00000169670.2 15834 2679 30 ENSG00000280054.1 RP1-197B17.7 chr12 47728151 47730598 - TEC KNOWN OTTHUMG00000187439.1 2448 2448 1 ENSG00000274902.1 RP1-197B17.4 chr12 47731908 47732351 + lincRNA NOVEL OTTHUMG00000187373.2 444 444 1 ENSG00000079337.14 RAPGEF3 chr12 47734367 47771040 - protein_coding KNOWN OTTHUMG00000133667.6 36674 12078 299 ENSG00000188004.8 C1orf204 chr1 159834474 159855347 - protein_coding KNOWN OTTHUMG00000035430.2 20874 2501 14 ENSG00000211584.12 SLC48A1 chr12 47753916 47782753 + protein_coding KNOWN OTTHUMG00000156983.2 28838 4921 31 ENSG00000277173.1 CTD-2024F21.1 chr12 47768529 47769648 + sense_intronic NOVEL OTTHUMG00000187440.1 1120 1120 1 ENSG00000061273.16 HDAC7 chr12 47782722 47833132 - protein_coding KNOWN OTTHUMG00000152968.6 50411 9928 311 ENSG00000268069.2 RP5-1057I20.4 chr12 47784923 47786002 + antisense NOVEL OTTHUMG00000187385.2 1080 1080 1 ENSG00000276691.1 RP5-1057I20.5 chr12 47788426 47788971 + antisense NOVEL OTTHUMG00000187386.1 546 546 1 ENSG00000274737.1 RP5-1057I20.6 chr12 47817451 47817966 - sense_intronic NOVEL OTTHUMG00000187387.2 516 516 1 ENSG00000257488.4 RP5-1057I20.2 chr12 47826854 47837898 + lincRNA NOVEL OTTHUMG00000169889.1 11045 944 12 ENSG00000111424.9 VDR chr12 47841537 47943048 - protein_coding KNOWN OTTHUMG00000169890.2 101512 5674 67 ENSG00000205537.2 RP11-89H19.1 chr12 47882649 47901525 + antisense NOVEL OTTHUMG00000169891.1 18877 1287 4 ENSG00000278385.1 RP11-89H19.2 chr12 47905122 47906865 + lincRNA NOVEL OTTHUMG00000187441.1 1744 1744 1 ENSG00000212161.1 SNORD64 chr1 159851906 159851972 - snoRNA NOVEL NA 67 67 1 ENSG00000279840.1 RP1-228P16.9 chr12 47960497 47963469 - TEC KNOWN OTTHUMG00000187431.1 2973 2973 1 ENSG00000134291.10 TMEM106C chr12 47963569 47968878 + protein_coding KNOWN OTTHUMG00000169892.2 5310 3475 115 ENSG00000139219.16 COL2A1 chr12 47972965 48004486 - protein_coding KNOWN OTTHUMG00000149896.4 31522 6596 172 ENSG00000258203.4 RP1-228P16.3 chr12 48005277 48011227 - lincRNA NOVEL OTTHUMG00000169893.1 5951 1044 9 ENSG00000257985.1 RP1-228P16.4 chr12 48011304 48025469 + antisense NOVEL OTTHUMG00000169894.1 14166 3112 4 ENSG00000257955.1 RP1-228P16.5 chr12 48019771 48025382 - lincRNA NOVEL OTTHUMG00000169895.1 5612 962 2 ENSG00000276814.1 RP1-228P16.8 chr12 48039784 48040761 - lincRNA NOVEL OTTHUMG00000187396.2 978 978 1 ENSG00000079387.12 SENP1 chr12 48042898 48106308 - protein_coding KNOWN OTTHUMG00000169896.2 63411 6342 99 ENSG00000240399.1 RP1-228P16.1 chr12 48054813 48055591 - transcribed_processed_pseudogene KNOWN OTTHUMG00000157556.2 779 779 2 ENSG00000222635.1 RNU6-1203P chr12 48081319 48081428 + snRNA KNOWN NA 110 110 1 ENSG00000272078.1 RP4-734G22.3 chr1 10639241 10654333 + antisense NOVEL OTTHUMG00000185370.1 15093 7923 2 ENSG00000243284.1 VSIG8 chr1 159854316 159862657 - protein_coding KNOWN OTTHUMG00000168834.15 8342 1818 7 ENSG00000226138.4 RP1-228P16.7 chr12 48085062 48085421 + processed_pseudogene KNOWN OTTHUMG00000169897.1 360 360 1 ENSG00000152556.14 PFKM chr12 48105139 48146404 + protein_coding KNOWN OTTHUMG00000169898.2 41266 7284 296 ENSG00000275770.1 MIR6505 chr12 48132797 48132867 + miRNA KNOWN NA 71 71 1 ENSG00000177981.9 ASB8 chr12 48147788 48181213 - protein_coding KNOWN OTTHUMG00000167834.2 33426 4087 72 ENSG00000274124.1 RP11-474C8.8 chr12 48152817 48153128 + antisense NOVEL OTTHUMG00000187417.1 312 312 1 ENSG00000258051.1 RP11-474C8.3 chr12 48160245 48160878 - processed_pseudogene KNOWN OTTHUMG00000169899.1 634 634 1 ENSG00000257885.1 RP11-474C8.4 chr12 48168847 48169659 - processed_pseudogene KNOWN OTTHUMG00000169900.1 813 813 1 ENSG00000257848.1 RP11-474C8.5 chr12 48171590 48173353 + processed_pseudogene KNOWN OTTHUMG00000169901.1 1764 1044 3 ENSG00000177875.4 CCDC184 chr12 48183584 48185926 + protein_coding KNOWN OTTHUMG00000169902.1 2343 2343 1 ENSG00000279875.1 RP11-474C8.7 chr12 48189349 48191207 + TEC KNOWN OTTHUMG00000172903.1 1859 1859 1 ENSG00000256029.4 RP11-190A12.7 chr1 159857900 159873053 - protein_coding NOVEL OTTHUMG00000035431.16 15154 681 16 ENSG00000269514.1 RP11-370I10.12 chr12 48198387 48202031 + lincRNA NOVEL OTTHUMG00000187444.1 3645 3645 1 ENSG00000172640.3 OR10AD1 chr12 48202083 48203387 - protein_coding KNOWN OTTHUMG00000168027.2 1305 1305 1 ENSG00000258234.1 RP11-370I10.2 chr12 48231098 48284210 - lincRNA NOVEL OTTHUMG00000169903.1 53113 566 4 ENSG00000275228.1 RP11-370I10.10 chr12 48327942 48328472 - lincRNA NOVEL OTTHUMG00000187393.1 531 531 1 ENSG00000187166.1 H1FNT chr12 48328980 48330279 + protein_coding KNOWN OTTHUMG00000169904.1 1300 1300 1 ENSG00000258273.1 RP11-370I10.4 chr12 48333755 48333901 - unprocessed_pseudogene KNOWN OTTHUMG00000169905.1 147 147 1 ENSG00000167528.11 ZNF641 chr12 48337180 48351414 - protein_coding KNOWN OTTHUMG00000169906.3 14235 8474 43 ENSG00000257735.1 RP11-370I10.6 chr12 48350945 48442411 + antisense NOVEL OTTHUMG00000169907.2 91467 562 4 ENSG00000257763.1 OR5BK1P chr12 48355792 48356614 - unprocessed_pseudogene KNOWN OTTHUMG00000170016.1 823 823 1 ENSG00000273765.1 RP11-370I10.11 chr12 48360920 48361377 + lincRNA NOVEL OTTHUMG00000187391.1 458 458 1 ENSG00000272668.1 RP11-190A12.8 chr1 159866954 159867685 + antisense NOVEL OTTHUMG00000186428.1 732 732 1 ENSG00000258024.1 OR5BT1P chr12 48385417 48386265 - unprocessed_pseudogene KNOWN OTTHUMG00000170017.1 849 849 1 ENSG00000257792.1 OR5BJ1P chr12 48394510 48395392 - unprocessed_pseudogene KNOWN OTTHUMG00000170018.1 883 883 1 ENSG00000273434.1 OR8S21P chr12 48417150 48417337 - unprocessed_pseudogene KNOWN OTTHUMG00000185952.1 188 188 1 ENSG00000226413.2 OR8T1P chr12 48442030 48442947 - unprocessed_pseudogene KNOWN OTTHUMG00000154311.2 918 918 1 ENSG00000139223.2 ANP32D chr12 48472665 48473624 + protein_coding KNOWN OTTHUMG00000162681.2 960 960 1 ENSG00000177627.8 C12orf54 chr12 48482503 48496512 + protein_coding KNOWN OTTHUMG00000170019.2 14010 1857 36 ENSG00000258121.1 RP11-722P11.4 chr12 48483287 48500961 - antisense NOVEL OTTHUMG00000170020.1 17675 588 3 ENSG00000240443.1 RPS10P20 chr12 48487946 48488408 + transcribed_processed_pseudogene KNOWN OTTHUMG00000157558.1 463 463 1 ENSG00000197376.2 OR8S1 chr12 48507354 48529897 + protein_coding KNOWN OTTHUMG00000170021.2 22544 3097 4 ENSG00000198678.5 OR5BS1P chr12 48559882 48562956 + unprocessed_pseudogene KNOWN OTTHUMG00000170390.1 3075 936 2 ENSG00000213085.8 CFAP45 chr1 159872364 159900163 - protein_coding KNOWN OTTHUMG00000035432.3 27800 2625 48 ENSG00000167531.5 LALBA chr12 48567684 48570066 - protein_coding KNOWN OTTHUMG00000170391.1 2383 1247 7 ENSG00000224709.1 OR11M1P chr12 48627888 48628782 + unitary_pseudogene KNOWN OTTHUMG00000154301.1 895 895 1 ENSG00000139620.11 KANSL2 chr12 48653401 48682238 - protein_coding KNOWN OTTHUMG00000170392.1 28838 3386 88 ENSG00000221491.2 SNORA34 chr12 48654382 48654518 - snoRNA KNOWN NA 137 137 1 ENSG00000281842.1 AC079951.1 chr12 48654426 48654537 - miRNA NOVEL NA 112 112 1 ENSG00000206612.1 SNORA2A chr12 48656648 48656782 - snoRNA KNOWN NA 135 135 1 ENSG00000207313.1 SNORA2B chr12 48667457 48667593 - snoRNA KNOWN NA 137 137 1 ENSG00000129315.8 CCNT1 chr12 48688458 48716998 - protein_coding KNOWN OTTHUMG00000170393.1 28541 7371 29 ENSG00000257987.4 LINC00935 chr12 48727435 48765786 + lincRNA KNOWN OTTHUMG00000170394.1 38352 658 9 ENSG00000257653.1 RP11-579D7.2 chr12 48766194 48767323 + antisense NOVEL OTTHUMG00000170395.1 1130 713 2 ENSG00000266458.1 MIR4259 chr1 159899979 159900079 - miRNA KNOWN NA 101 101 1 ENSG00000174233.10 ADCY6 chr12 48766194 48789037 - protein_coding KNOWN OTTHUMG00000170396.1 22844 8410 95 ENSG00000264201.1 MIR4701 chr12 48771975 48772037 - miRNA KNOWN NA 63 63 1 ENSG00000257660.4 RP11-579D7.4 chr12 48789147 48790535 + lincRNA NOVEL OTTHUMG00000170397.1 1389 554 6 ENSG00000271547.1 RP11-579D7.8 chr12 48800576 48801086 - processed_pseudogene KNOWN OTTHUMG00000184789.1 511 511 1 ENSG00000207467.1 Y_RNA chr12 48809911 48810016 + misc_RNA NOVEL NA 106 106 1 ENSG00000167535.6 CACNB3 chr12 48813794 48828941 + protein_coding KNOWN OTTHUMG00000170398.1 15148 7153 176 ENSG00000174243.8 DDX23 chr12 48829764 48852842 - protein_coding KNOWN OTTHUMG00000170399.2 23079 5419 96 ENSG00000172602.8 RND1 chr12 48857145 48865898 - protein_coding KNOWN OTTHUMG00000170400.3 8754 3099 16 ENSG00000199394.1 RNU6-600P chr12 48892130 48892228 - snRNA KNOWN NA 99 99 1 ENSG00000239617.1 RP11-302B13.1 chr12 48903418 48903813 - processed_pseudogene KNOWN OTTHUMG00000157559.1 396 396 1 ENSG00000279430.1 RP11-190A12.9 chr1 159910094 159910554 - TEC KNOWN OTTHUMG00000187068.1 461 461 1 ENSG00000272822.1 RP11-302B13.5 chr12 48903503 48957365 - protein_coding PUTATIVE OTTHUMG00000186497.1 53863 939 5 ENSG00000139537.9 CCDC65 chr12 48904110 48931840 + protein_coding KNOWN OTTHUMG00000170401.1 27731 2373 34 ENSG00000134285.9 FKBP11 chr12 48921518 48926474 - protein_coding KNOWN OTTHUMG00000170402.2 4957 4957 55 ENSG00000255863.2 AC073610.5 chr12 48921963 48939663 - protein_coding KNOWN OTTHUMG00000133766.4 17701 406 3 ENSG00000281789.1 Y_RNA chr12 48927939 48928033 - misc_RNA NOVEL NA 95 95 1 ENSG00000134287.8 ARF3 chr12 48935723 48957551 - protein_coding KNOWN OTTHUMG00000168080.1 21829 5002 36 ENSG00000169884.12 WNT10B chr12 48965340 48971763 - protein_coding KNOWN OTTHUMG00000150734.2 6424 2629 26 ENSG00000200303.1 RNU6-940P chr12 48975543 48975646 + snRNA KNOWN NA 104 104 1 ENSG00000125084.10 WNT1 chr12 48978453 48981676 + protein_coding KNOWN OTTHUMG00000170403.1 3224 1347 9 ENSG00000181418.7 DDN chr12 48995149 48999309 - protein_coding KNOWN OTTHUMG00000156183.1 4161 3749 2 ENSG00000158710.13 TAGLN2 chr1 159918107 159925732 - protein_coding KNOWN OTTHUMG00000022793.2 7626 2487 24 ENSG00000258283.1 RP11-386G11.3 chr12 48995150 48996334 + antisense NOVEL OTTHUMG00000170404.1 1185 279 2 ENSG00000257913.2 RP11-386G11.5 chr12 48998367 49019235 + antisense NOVEL OTTHUMG00000170405.2 20869 2238 10 ENSG00000181929.10 PRKAG1 chr12 49002274 49019197 - protein_coding KNOWN OTTHUMG00000170406.1 16924 4556 161 ENSG00000167548.13 KMT2D chr12 49018975 49059774 - protein_coding KNOWN OTTHUMG00000166524.2 40800 20476 74 ENSG00000167550.9 RHEBL1 chr12 49064685 49070025 - protein_coding KNOWN OTTHUMG00000170407.1 5341 1290 28 ENSG00000277672.1 RP11-386G11.11 chr12 49075039 49075802 + processed_pseudogene KNOWN OTTHUMG00000187915.1 764 277 2 ENSG00000139549.2 DHH chr12 49089421 49094819 - protein_coding KNOWN OTTHUMG00000170408.1 5399 1936 3 ENSG00000257346.1 RP11-386G11.8 chr12 49090208 49093312 + antisense NOVEL OTTHUMG00000170409.1 3105 839 6 ENSG00000139636.14 LMBR1L chr12 49096551 49110900 - protein_coding KNOWN OTTHUMG00000150511.3 14350 6047 209 ENSG00000123416.14 TUBA1B chr12 49127782 49131397 - protein_coding KNOWN OTTHUMG00000170410.1 3616 3574 30 ENSG00000085552.15 IGSF9 chr1 159927039 159945604 - protein_coding KNOWN OTTHUMG00000022794.2 18566 6628 95 ENSG00000258017.1 RP11-386G11.10 chr12 49127782 49147869 + antisense NOVEL OTTHUMG00000170411.1 20088 1632 10 ENSG00000200309.1 Y_RNA chr12 49132853 49132947 - misc_RNA NOVEL NA 95 95 1 ENSG00000167552.12 TUBA1A chr12 49184796 49189324 - protein_coding KNOWN OTTHUMG00000169511.2 4529 3421 30 ENSG00000167553.13 TUBA1C chr12 49188736 49274603 + protein_coding KNOWN OTTHUMG00000169497.4 85868 4631 31 ENSG00000274017.1 Metazoa_SRP chr12 49196784 49197062 + misc_RNA NOVEL NA 279 279 1 ENSG00000258101.2 RP11-977B10.2 chr12 49232790 49264756 - antisense NOVEL OTTHUMG00000169512.2 31967 1453 2 ENSG00000258232.2 RP11-161H23.5 chr12 49265156 49273306 - antisense NOVEL OTTHUMG00000169513.2 8151 680 2 ENSG00000258334.1 RP11-161H23.9 chr12 49292631 49324576 - antisense NOVEL OTTHUMG00000169733.1 31946 4166 8 ENSG00000135406.12 PRPH chr12 49293252 49298686 + protein_coding KNOWN OTTHUMG00000167140.6 5435 4353 36 ENSG00000135451.11 TROAP chr12 49323236 49331731 + protein_coding KNOWN OTTHUMG00000169486.2 8496 3954 114 ENSG00000162723.8 SLAMF9 chr1 159951492 159954254 - protein_coding KNOWN OTTHUMG00000024074.1 2763 1156 13 ENSG00000186897.4 C1QL4 chr12 49332411 49337188 - protein_coding KNOWN OTTHUMG00000169515.2 4778 2071 2 ENSG00000178401.13 DNAJC22 chr12 49346917 49357546 + protein_coding KNOWN OTTHUMG00000169487.4 10630 5006 11 ENSG00000123352.16 SPATS2 chr12 49366584 49527424 + protein_coding KNOWN OTTHUMG00000169419.9 160841 6840 142 ENSG00000257954.1 RP11-161H23.10 chr12 49389516 49390162 + processed_pseudogene KNOWN OTTHUMG00000169734.1 647 647 1 ENSG00000257464.1 RP11-161H23.8 chr12 49442424 49442652 - processed_pseudogene KNOWN OTTHUMG00000169516.1 229 229 1 ENSG00000135519.6 KCNH3 chr12 49539157 49558308 + protein_coding KNOWN OTTHUMG00000169517.3 19152 4265 25 ENSG00000187778.12 MCRS1 chr12 49556544 49568153 - protein_coding KNOWN OTTHUMG00000169620.4 11610 3269 141 ENSG00000110844.12 PRPF40B chr12 49568218 49644666 + protein_coding KNOWN OTTHUMG00000169568.5 76449 9444 130 ENSG00000257964.1 RP11-133N21.10 chr12 49576840 49577505 - antisense NOVEL OTTHUMG00000169650.1 666 570 2 ENSG00000135436.7 FAM186B chr12 49582885 49605639 - protein_coding KNOWN OTTHUMG00000167427.3 22755 4756 28 ENSG00000224259.4 LINC01133 chr1 159961218 159979061 + lincRNA NOVEL OTTHUMG00000024077.1 17844 1266 6 ENSG00000199237.1 RNU6-834P chr12 49593104 49593213 + snRNA KNOWN NA 110 110 1 ENSG00000258284.1 POLR2KP1 chr12 49594091 49594258 + processed_pseudogene KNOWN OTTHUMG00000169587.1 168 168 1 ENSG00000257243.1 RP11-133N21.7 chr12 49595148 49595688 + processed_pseudogene KNOWN OTTHUMG00000169588.1 541 541 1 ENSG00000258104.1 HIGD1AP9 chr12 49619334 49619612 + processed_pseudogene KNOWN OTTHUMG00000169589.1 279 279 1 ENSG00000161791.12 FMNL3 chr12 49636499 49708165 - protein_coding KNOWN OTTHUMG00000169651.4 71667 13424 101 ENSG00000139644.11 TMBIM6 chr12 49707725 49764934 + protein_coding KNOWN OTTHUMG00000169652.6 57210 6186 167 ENSG00000257570.1 RP11-133N21.12 chr12 49709237 49709336 + processed_pseudogene KNOWN OTTHUMG00000169653.1 100 100 1 ENSG00000257730.1 LSM6P2 chr12 49770960 49771136 + processed_pseudogene KNOWN OTTHUMG00000169654.1 177 177 1 ENSG00000167566.15 NCKAP5L chr12 49791146 49828750 - protein_coding KNOWN OTTHUMG00000156969.3 37605 8090 25 ENSG00000258057.4 BCDIN3D-AS1 chr12 49828542 49841143 + antisense NOVEL OTTHUMG00000169706.2 12602 3586 10 ENSG00000225158.2 HSPE1P24 chr1 10895761 10895998 + processed_pseudogene KNOWN OTTHUMG00000002034.2 238 238 1 ENSG00000273933.1 RP11-48O20.5 chr1 159972548 159974064 - unprocessed_pseudogene KNOWN OTTHUMG00000187538.1 1517 845 3 ENSG00000186666.5 BCDIN3D chr12 49836039 49843129 - protein_coding KNOWN OTTHUMG00000169807.3 7091 3721 4 ENSG00000257253.2 RP11-70F11.7 chr12 49861207 49865802 + lincRNA NOVEL OTTHUMG00000169707.2 4596 722 4 ENSG00000242041.1 RP11-70F11.2 chr12 49863173 49863503 + processed_pseudogene KNOWN OTTHUMG00000157566.1 331 331 1 ENSG00000135472.7 FAIM2 chr12 49866896 49904217 - protein_coding KNOWN OTTHUMG00000169808.3 37322 6057 69 ENSG00000258135.4 RP11-70F11.11 chr12 49908882 49911863 - lincRNA NOVEL OTTHUMG00000169809.2 2982 2459 13 ENSG00000257771.4 RP11-70F11.8 chr12 49911953 49930320 + lincRNA NOVEL OTTHUMG00000169708.2 18368 4701 18 ENSG00000167580.6 AQP2 chr12 49950741 49958881 + protein_coding KNOWN OTTHUMG00000169709.2 8141 4305 13 ENSG00000257588.1 RP11-469H8.6 chr12 49951512 49962924 - antisense NOVEL OTTHUMG00000169810.1 11413 1574 8 ENSG00000257378.1 RP11-469H8.8 chr12 49954639 49956125 - antisense NOVEL OTTHUMG00000170041.1 1487 560 2 ENSG00000161798.6 AQP5 chr12 49961870 49965681 + protein_coding KNOWN OTTHUMG00000169710.2 3812 1885 6 ENSG00000237409.2 RP11-226L15.1 chr1 160020300 160020727 + processed_pseudogene KNOWN OTTHUMG00000024078.2 428 428 1 ENSG00000086159.11 AQP6 chr12 49967194 49977139 + protein_coding KNOWN OTTHUMG00000133548.3 9946 5129 24 ENSG00000161800.11 RACGAP1 chr12 49976923 50033136 - protein_coding KNOWN OTTHUMG00000169811.5 56214 4487 212 ENSG00000110881.10 ASIC1 chr12 50057548 50083611 + protein_coding KNOWN OTTHUMG00000169812.3 26064 5745 74 ENSG00000066117.13 SMARCD1 chr12 50084972 50100712 + protein_coding KNOWN OTTHUMG00000150194.3 15741 5136 75 ENSG00000167588.11 GPD1 chr12 50103819 50111319 + protein_coding KNOWN OTTHUMG00000169813.4 7501 3991 38 ENSG00000178449.7 COX14 chr12 50111979 50120457 + protein_coding KNOWN OTTHUMG00000185635.1 8479 1073 10 ENSG00000272368.2 RP4-605O3.4 chr12 50112197 50165618 + antisense NOVEL OTTHUMG00000170084.2 53422 1117 4 ENSG00000139624.11 CERS5 chr12 50129306 50167533 - protein_coding KNOWN OTTHUMG00000169819.8 38228 6749 146 ENSG00000050405.12 LIMA1 chr12 50175788 50283546 - protein_coding KNOWN OTTHUMG00000169852.5 107759 6317 97 ENSG00000257298.1 RP3-405J10.3 chr12 50185580 50191363 - sense_intronic NOVEL OTTHUMG00000169883.1 5784 4713 2 ENSG00000260766.1 RP11-226L15.5 chr1 160024953 160026794 - sense_overlapping NOVEL OTTHUMG00000176110.1 1842 1842 1 ENSG00000257531.2 RP3-405J10.2 chr12 50217662 50218343 - transcribed_processed_pseudogene KNOWN OTTHUMG00000169884.2 682 354 2 ENSG00000257256.1 RP3-405J10.4 chr12 50219604 50229984 + antisense NOVEL OTTHUMG00000170102.1 10381 325 2 ENSG00000221604.1 MIR1293 chr12 50234142 50234212 - miRNA KNOWN NA 71 71 1 ENSG00000212496.1 RNU6-1093P chr12 50256238 50256344 - snRNA KNOWN NA 107 107 1 ENSG00000278842.1 RP3-405J10.5 chr12 50286244 50289231 + processed_pseudogene KNOWN OTTHUMG00000187920.1 2988 1204 4 ENSG00000185958.8 FAM186A chr12 50326230 50396622 - protein_coding KNOWN OTTHUMG00000167889.1 70393 8296 24 ENSG00000244266.1 RP11-112N23.1 chr12 50365652 50366086 + processed_pseudogene KNOWN OTTHUMG00000157568.1 435 435 1 ENSG00000161813.19 LARP4 chr12 50392383 50480004 + protein_coding KNOWN OTTHUMG00000163724.11 87622 8112 199 ENSG00000066084.11 DIP2B chr12 50504985 50748667 + protein_coding KNOWN OTTHUMG00000169475.3 243683 10361 82 ENSG00000207136.1 RNU6-769P chr12 50633273 50633376 + snRNA KNOWN NA 104 104 1 ENSG00000143315.6 PIGM chr1 160027673 160031991 - protein_coding KNOWN OTTHUMG00000024081.2 4319 4319 1 ENSG00000200183.1 RNU6-238P chr12 50656973 50657078 + snRNA KNOWN NA 106 106 1 ENSG00000200428.1 Y_RNA chr12 50743568 50743684 + misc_RNA NOVEL NA 117 117 1 ENSG00000271018.1 RP11-60E8.2 chr12 50756892 50757433 + processed_pseudogene KNOWN OTTHUMG00000184757.1 542 193 2 ENSG00000123268.7 ATF1 chr12 50763710 50821122 + protein_coding KNOWN OTTHUMG00000169482.1 57413 2790 29 ENSG00000271490.1 RP11-60E8.4 chr12 50806335 50806437 - processed_pseudogene KNOWN OTTHUMG00000184780.1 103 103 1 ENSG00000243075.3 RN7SL519P chr12 50841498 50841785 - misc_RNA KNOWN NA 288 288 1 ENSG00000186452.9 TMPRSS12 chr12 50842920 50887884 + protein_coding KNOWN OTTHUMG00000169483.1 44965 3336 9 ENSG00000271621.1 RP11-60E8.3 chr12 50847925 50848312 - processed_pseudogene KNOWN OTTHUMG00000184777.1 388 388 1 ENSG00000185432.11 METTL7A chr12 50923472 50932517 + protein_coding KNOWN OTTHUMG00000169484.2 9046 4083 14 ENSG00000274156.1 RP11-407N8.6 chr12 50934942 50935464 - lincRNA NOVEL OTTHUMG00000187369.1 523 523 1 ENSG00000177807.6 KCNJ10 chr1 160037467 160070248 - protein_coding KNOWN OTTHUMG00000024073.2 32782 5293 4 ENSG00000199740.1 Y_RNA chr12 50939927 50940026 - misc_RNA NOVEL NA 100 100 1 ENSG00000271596.1 RP11-407N8.4 chr12 50949117 50949384 - processed_pseudogene KNOWN OTTHUMG00000184776.1 268 268 1 ENSG00000214511.3 HIGD1C chr12 50953922 50970506 + protein_coding KNOWN OTTHUMG00000169488.2 16585 371 3 ENSG00000274797.1 RP11-407N8.5 chr12 50953924 50954356 - antisense NOVEL OTTHUMG00000187367.1 433 433 1 ENSG00000110911.13 SLC11A2 chr12 50979401 51028566 - protein_coding KNOWN OTTHUMG00000169493.2 49166 9823 232 ENSG00000272028.1 U6 chr12 51014134 51014241 - snRNA NOVEL NA 108 108 1 ENSG00000199903.1 RNU6-1273P chr12 51037499 51037602 + snRNA KNOWN NA 104 104 1 ENSG00000050426.14 LETMD1 chr12 51047962 51060424 + protein_coding KNOWN OTTHUMG00000169538.3 12463 6032 181 ENSG00000277201.1 AC087884.1 chr12 51049921 51050025 + miRNA NOVEL NA 105 105 1 ENSG00000110925.5 CSRNP2 chr12 51061205 51083664 - protein_coding KNOWN OTTHUMG00000169578.5 22460 5230 29 ENSG00000225279.1 RP11-536C5.2 chr1 160062488 160079821 + antisense NOVEL OTTHUMG00000024076.1 17334 645 5 ENSG00000135457.8 TFCP2 chr12 51093663 51173134 - protein_coding KNOWN OTTHUMG00000169621.1 79472 3827 62 ENSG00000244540.2 RP11-416A17.1 chr12 51106817 51107144 + processed_pseudogene KNOWN OTTHUMG00000157569.2 328 328 1 ENSG00000257246.1 RP11-416A17.6 chr12 51124628 51125381 - processed_pseudogene KNOWN OTTHUMG00000169648.1 754 754 1 ENSG00000200953.1 Y_RNA chr12 51156868 51156977 - misc_RNA NOVEL NA 110 110 1 ENSG00000199824.1 RNU6-199P chr12 51162901 51163007 + snRNA KNOWN NA 107 107 1 ENSG00000184271.14 POU6F1 chr12 51186936 51217693 - protein_coding KNOWN OTTHUMG00000169622.3 30758 6021 43 ENSG00000278126.1 RP11-454E5.4 chr12 51201684 51202581 - sense_intronic NOVEL OTTHUMG00000187368.1 898 898 1 ENSG00000183283.14 DAZAP2 chr12 51238292 51271362 + protein_coding KNOWN OTTHUMG00000169649.6 33071 5731 55 ENSG00000170545.15 SMAGP chr12 51244558 51270890 - protein_coding KNOWN OTTHUMG00000185196.1 26333 3558 30 ENSG00000110934.9 BIN2 chr12 51281038 51324668 - protein_coding KNOWN OTTHUMG00000185197.2 43631 4010 89 ENSG00000162728.4 KCNJ9 chr1 160081570 160090563 + protein_coding KNOWN OTTHUMG00000024072.1 8994 4170 3 ENSG00000139610.1 CELA1 chr12 51328443 51346679 - protein_coding KNOWN OTTHUMG00000167523.1 18237 952 8 ENSG00000139629.14 GALNT6 chr12 51351247 51392867 - protein_coding KNOWN OTTHUMG00000185181.2 41621 7347 92 ENSG00000050438.15 SLC4A8 chr12 51391317 51515763 + protein_coding KNOWN OTTHUMG00000169489.5 124447 17980 191 ENSG00000271065.1 RP11-607P23.1 chr12 51421956 51424611 - antisense NOVEL OTTHUMG00000185219.1 2656 347 2 ENSG00000196876.12 SCN8A chr12 51590266 51812864 + protein_coding KNOWN OTTHUMG00000169490.5 222599 12481 163 ENSG00000257851.2 HNRNPA3P10 chr12 51712469 51713606 - processed_pseudogene KNOWN OTTHUMG00000169491.2 1138 1138 1 ENSG00000260122.1 RP11-923I11.3 chr12 51809705 51810600 - lincRNA NOVEL OTTHUMG00000172897.1 896 896 1 ENSG00000278451.1 RP11-923I11.8 chr12 51817889 51818358 - antisense NOVEL OTTHUMG00000187374.1 470 470 1 ENSG00000261586.2 RP11-923I11.6 chr12 51817899 51820150 + lincRNA NOVEL OTTHUMG00000175692.2 2252 2094 2 ENSG00000261308.1 FIGNL2 chr12 51820459 51822415 - processed_pseudogene KNOWN OTTHUMG00000175693.1 1957 1957 1 ENSG00000162729.12 IGSF8 chr1 160091340 160098943 - protein_coding KNOWN OTTHUMG00000024075.5 7604 2592 28 ENSG00000260473.1 RP11-923I11.4 chr12 51823503 51835496 + lincRNA NOVEL OTTHUMG00000172913.1 11994 1027 5 ENSG00000259887.1 RP11-923I11.5 chr12 51848223 51852729 + lincRNA NOVEL OTTHUMG00000172914.1 4507 427 3 ENSG00000167612.11 ANKRD33 chr12 51887960 51891664 + protein_coding KNOWN OTTHUMG00000169506.1 3705 3705 34 ENSG00000258021.1 RP11-1100L3.4 chr12 51900565 51901336 + processed_pseudogene KNOWN OTTHUMG00000169594.1 772 772 1 ENSG00000139567.11 ACVRL1 chr12 51906908 51923361 + protein_coding KNOWN OTTHUMG00000169507.3 16454 5040 39 ENSG00000135503.11 ACVR1B chr12 51951667 51997078 + protein_coding KNOWN OTTHUMG00000167920.3 45412 5690 50 ENSG00000206992.1 RNU6-574P chr12 51987657 51987763 + snRNA KNOWN NA 107 107 1 ENSG00000161835.9 GRASP chr12 52006940 52015889 + protein_coding KNOWN OTTHUMG00000169595.2 8950 2829 39 ENSG00000123358.18 NR4A1 chr12 52022832 52059507 + protein_coding KNOWN OTTHUMG00000150393.5 36676 7295 90 ENSG00000259884.1 RP11-1100L3.8 chr12 52058459 52059503 - lincRNA NOVEL OTTHUMG00000175694.1 1045 915 4 ENSG00000018625.13 ATP1A2 chr1 160115759 160143591 + protein_coding KNOWN OTTHUMG00000024080.3 27833 6298 94 ENSG00000123395.13 ATG101 chr12 52069246 52077494 + protein_coding KNOWN OTTHUMG00000169611.2 8249 3199 20 ENSG00000257663.1 RP11-1100L3.7 chr12 52076841 52082084 - antisense NOVEL OTTHUMG00000169612.1 5244 647 2 ENSG00000257542.4 OR7E47P chr12 52079696 52108261 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000169615.3 28566 1606 6 ENSG00000272724.1 OR7E47P chr12 52084744 52092285 + sense_intronic NOVEL OTTHUMG00000185956.1 7542 449 3 ENSG00000257989.1 RP1-288H2.2 chr12 52092485 52104297 - lincRNA NOVEL OTTHUMG00000169614.1 11813 512 3 ENSG00000265009.1 AC078864.1 chr12 52110634 52110704 - miRNA NOVEL NA 71 71 1 ENSG00000265804.1 AC078864.2 chr12 52113925 52114012 + miRNA NOVEL NA 88 88 1 ENSG00000167767.12 KRT80 chr12 52168996 52192000 - protein_coding KNOWN OTTHUMG00000150193.1 23005 4350 25 ENSG00000257137.4 C12orf80 chr12 52205584 52210855 - lincRNA NOVEL OTTHUMG00000169626.1 5272 1595 9 ENSG00000258279.2 LINC00592 chr12 52210930 52223804 + lincRNA KNOWN OTTHUMG00000169627.2 12875 1044 5 ENSG00000132681.15 ATP1A4 chr1 160151570 160186977 + protein_coding KNOWN OTTHUMG00000031609.2 35408 6284 79 ENSG00000257649.1 METTL7AP1 chr12 52229093 52229588 - processed_pseudogene KNOWN OTTHUMG00000169628.1 496 496 1 ENSG00000135480.13 KRT7 chr12 52232520 52252186 + protein_coding KNOWN OTTHUMG00000169580.1 19667 4093 45 ENSG00000281415.1 AC021066.1 chr12 52241481 52241613 - miRNA NOVEL NA 133 133 1 ENSG00000257671.1 RP3-416H24.1 chr12 52245048 52247448 - antisense NOVEL OTTHUMG00000169581.1 2401 1693 2 ENSG00000170442.10 KRT86 chr12 52249300 52309163 + protein_coding KNOWN OTTHUMG00000184153.3 59864 2394 23 ENSG00000135477.10 KRT87P chr12 52250466 52258867 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000165548.1 8402 1778 18 ENSG00000257830.1 RP11-845M18.7 chr12 52274647 52279156 - antisense NOVEL OTTHUMG00000169629.1 4510 647 2 ENSG00000205426.9 KRT81 chr12 52285913 52291534 - protein_coding KNOWN OTTHUMG00000167574.2 5622 1929 19 ENSG00000257829.1 RP11-845M18.6 chr12 52306616 52308371 - antisense NOVEL OTTHUMG00000169631.1 1756 624 2 ENSG00000170523.3 KRT83 chr12 52314301 52321398 - protein_coding KNOWN OTTHUMG00000169632.1 7098 1875 9 ENSG00000235146.2 RP5-857K21.2 chr1 587629 594768 + lincRNA NOVEL OTTHUMG00000002329.1 7140 635 4 ENSG00000175262.13 C1orf127 chr1 10946471 10982037 - protein_coding KNOWN OTTHUMG00000002032.5 35567 3573 37 ENSG00000143318.11 CASQ1 chr1 160190556 160201886 + protein_coding KNOWN OTTHUMG00000031607.4 11331 2176 24 ENSG00000274928.3 KRT89P chr12 52341197 52353154 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000187921.1 11958 1338 12 ENSG00000135443.7 KRT85 chr12 52360006 52367481 - protein_coding KNOWN OTTHUMG00000169633.1 7476 2713 20 ENSG00000161849.3 KRT84 chr12 52377812 52385652 - protein_coding KNOWN OTTHUMG00000169634.1 7841 2092 9 ENSG00000258253.1 RP3-416H24.4 chr12 52380460 52402407 + antisense NOVEL OTTHUMG00000169635.1 21948 562 2 ENSG00000161850.2 KRT82 chr12 52393931 52406355 - protein_coding KNOWN OTTHUMG00000169636.1 12425 2664 9 ENSG00000257500.1 RP11-1020M18.10 chr12 52407580 52428494 + antisense NOVEL OTTHUMG00000169769.1 20915 629 3 ENSG00000257844.1 KRT90P chr12 52413960 52421876 - unprocessed_pseudogene KNOWN OTTHUMG00000169770.1 7917 884 6 ENSG00000170454.5 KRT75 chr12 52424070 52434525 - protein_coding KNOWN OTTHUMG00000169592.1 10456 2324 9 ENSG00000185479.5 KRT6B chr12 52446651 52452126 - protein_coding KNOWN OTTHUMG00000169593.1 5476 2282 9 ENSG00000280966.1 AC055736.2 chr12 52449492 52449620 + miRNA NOVEL NA 129 129 1 ENSG00000227741.1 RP11-536C5.7 chr1 160202199 160208869 - antisense NOVEL OTTHUMG00000031606.1 6671 1578 5 ENSG00000170465.9 KRT6C chr12 52468516 52473785 - protein_coding KNOWN OTTHUMG00000169596.1 5270 2896 11 ENSG00000281474.1 AC055736.4 chr12 52471155 52471283 + miRNA NOVEL NA 129 129 1 ENSG00000205420.9 KRT6A chr12 52487174 52493257 - protein_coding KNOWN OTTHUMG00000169597.2 6084 2928 23 ENSG00000281194.1 AC055736.3 chr12 52490592 52490720 + miRNA NOVEL NA 129 129 1 ENSG00000186081.10 KRT5 chr12 52514575 52520687 - protein_coding KNOWN OTTHUMG00000169657.1 6113 4292 51 ENSG00000280827.1 AC055736.1 chr12 52517613 52517741 + miRNA NOVEL NA 129 129 1 ENSG00000139648.6 KRT71 chr12 52543909 52553147 - protein_coding KNOWN OTTHUMG00000167831.1 9239 2265 9 ENSG00000170484.8 KRT74 chr12 52565782 52573825 - protein_coding KNOWN OTTHUMG00000169658.1 8044 2988 22 ENSG00000170486.9 KRT72 chr12 52585589 52601538 - protein_coding KNOWN OTTHUMG00000169744.1 15950 2154 40 ENSG00000257495.4 KRT73-AS1 chr12 52601467 52615305 + antisense NOVEL OTTHUMG00000169745.1 13839 4094 10 ENSG00000162734.11 PEA15 chr1 160205337 160215376 + protein_coding KNOWN OTTHUMG00000031605.1 10040 2806 18 ENSG00000186049.7 KRT73 chr12 52607570 52618559 - protein_coding KNOWN OTTHUMG00000169746.1 10990 2652 23 ENSG00000258120.1 KRT128P chr12 52632866 52634456 - unprocessed_pseudogene KNOWN OTTHUMG00000169747.1 1591 663 3 ENSG00000172867.3 KRT2 chr12 52644558 52652164 - protein_coding KNOWN OTTHUMG00000169748.1 7607 2522 13 ENSG00000167768.4 KRT1 chr12 52674736 52680407 - protein_coding KNOWN OTTHUMG00000169749.1 5672 2488 13 ENSG00000189182.8 KRT77 chr12 52689626 52703463 - protein_coding KNOWN OTTHUMG00000169450.2 13838 3952 21 ENSG00000257700.1 RP11-641A6.3 chr12 52692605 52696788 + antisense NOVEL OTTHUMG00000169750.1 4184 761 3 ENSG00000257402.1 KRT126P chr12 52715567 52719040 - unprocessed_pseudogene KNOWN OTTHUMG00000169751.1 3474 690 5 ENSG00000257616.1 RP11-641A6.5 chr12 52730425 52732865 + processed_pseudogene KNOWN OTTHUMG00000169752.1 2441 2441 1 ENSG00000258036.1 KRT125P chr12 52735266 52736142 - unprocessed_pseudogene KNOWN OTTHUMG00000169753.1 877 734 2 ENSG00000257343.1 RP11-641A6.8 chr12 52746596 52748308 - unprocessed_pseudogene KNOWN OTTHUMG00000169766.1 1713 495 3 ENSG00000265381.1 AL121987.1 chr1 160205377 160205464 + miRNA NOVEL NA 88 88 1 ENSG00000257675.1 RP11-641A6.9 chr12 52748776 52750127 + processed_pseudogene KNOWN OTTHUMG00000169767.1 1352 1352 1 ENSG00000257125.1 KRT127P chr12 52751978 52753821 - unprocessed_pseudogene KNOWN OTTHUMG00000169768.1 1844 433 3 ENSG00000258071.1 ARL2BPP2 chr12 52763405 52763893 + processed_pseudogene KNOWN OTTHUMG00000169796.1 489 489 1 ENSG00000185069.2 KRT76 chr12 52768155 52777345 - protein_coding KNOWN OTTHUMG00000169797.1 9191 2529 9 ENSG00000257404.1 RP11-153F5.2 chr12 52782650 52782839 + processed_pseudogene KNOWN OTTHUMG00000169798.1 190 190 1 ENSG00000186442.7 KRT3 chr12 52789685 52796117 - protein_coding KNOWN OTTHUMG00000169799.1 6433 2319 9 ENSG00000170477.11 KRT4 chr12 52806549 52814551 - protein_coding KNOWN OTTHUMG00000169800.1 8003 3312 26 ENSG00000185640.5 KRT79 chr12 52821410 52834295 - protein_coding KNOWN OTTHUMG00000169878.1 12886 2542 18 ENSG00000281110.1 AC107016.2 chr12 52824221 52824358 + miRNA NOVEL NA 138 138 1 ENSG00000257389.1 RP11-153F5.3 chr12 52837403 52837739 + processed_pseudogene KNOWN OTTHUMG00000169879.1 337 337 1 ENSG00000132716.17 DCAF8 chr1 160215715 160262531 - protein_coding KNOWN OTTHUMG00000031604.5 46817 7587 110 ENSG00000170423.11 KRT78 chr12 52837804 52849092 - protein_coding KNOWN OTTHUMG00000169880.1 11289 3260 29 ENSG00000241146.1 RPL7P41 chr12 52885429 52886385 + processed_pseudogene KNOWN OTTHUMG00000157570.1 957 957 1 ENSG00000170421.10 KRT8 chr12 52897187 52949954 - protein_coding KNOWN OTTHUMG00000169881.5 52768 5011 94 ENSG00000278185.1 RP11-153F5.7 chr12 52946614 52947125 - sense_intronic NOVEL OTTHUMG00000188624.1 512 512 1 ENSG00000111057.9 KRT18 chr12 52948871 52952901 + protein_coding KNOWN OTTHUMG00000169882.1 4031 3218 34 ENSG00000265039.1 AC107016.1 chr12 52951708 52951795 + miRNA NOVEL NA 88 88 1 ENSG00000063046.16 EIF4B chr12 53006158 53042209 + protein_coding KNOWN OTTHUMG00000169570.6 36052 6146 112 ENSG00000257475.2 RP11-983P16.2 chr12 53012104 53013921 + sense_intronic NOVEL OTTHUMG00000169714.2 1818 536 2 ENSG00000257337.5 RP11-983P16.4 chr12 53014596 53054438 - antisense NOVEL OTTHUMG00000169806.5 39843 5622 24 ENSG00000111077.16 TNS2 chr12 53046969 53064372 + protein_coding KNOWN OTTHUMG00000169730.12 17404 8093 255 ENSG00000258465.5 RP11-574F21.3 chr1 160217464 160285130 - protein_coding PUTATIVE OTTHUMG00000171815.1 67667 2875 25 ENSG00000278108.1 MIR6757 chr12 53056944 53057012 + miRNA KNOWN NA 69 69 1 ENSG00000167778.7 SPRYD3 chr12 53064316 53079420 - protein_coding KNOWN OTTHUMG00000170101.3 15105 3479 44 ENSG00000167779.6 IGFBP6 chr12 53097436 53102345 + protein_coding KNOWN OTTHUMG00000169773.1 4910 1279 16 ENSG00000167780.10 SOAT2 chr12 53103518 53124538 + protein_coding KNOWN OTTHUMG00000169774.1 21021 2044 34 ENSG00000258074.1 VTI1BP3 chr12 53131350 53131985 + processed_pseudogene KNOWN OTTHUMG00000170022.1 636 636 1 ENSG00000238669.1 RNU6-333P chr12 53138545 53138651 - snRNA KNOWN NA 107 107 1 ENSG00000258016.1 HIGD1AP1 chr12 53142053 53142327 + processed_pseudogene KNOWN OTTHUMG00000170023.1 275 275 1 ENSG00000257790.1 EIF4A1P4 chr12 53153272 53154484 + processed_pseudogene KNOWN OTTHUMG00000170024.1 1213 1213 1 ENSG00000139631.17 CSAD chr12 53157663 53180909 - protein_coding KNOWN OTTHUMG00000048076.11 23247 4390 177 ENSG00000257808.1 RP11-1136G11.8 chr12 53159586 53161000 + lincRNA NOVEL OTTHUMG00000170026.1 1415 481 3 ENSG00000228606.1 RP11-574F21.2 chr1 160261744 160262778 + antisense NOVEL OTTHUMG00000033109.1 1035 557 2 ENSG00000139651.10 ZNF740 chr12 53180700 53195141 + protein_coding KNOWN OTTHUMG00000170027.3 14442 9063 17 ENSG00000139626.14 ITGB7 chr12 53191318 53207307 - protein_coding KNOWN OTTHUMG00000169775.4 15990 4481 91 ENSG00000172819.15 RARG chr12 53210567 53232980 - protein_coding KNOWN OTTHUMG00000048077.3 22414 5127 89 ENSG00000182544.8 MFSD5 chr12 53251251 53254405 + protein_coding KNOWN OTTHUMG00000170028.3 3155 2581 10 ENSG00000135476.10 ESPL1 chr12 53268299 53293643 + protein_coding KNOWN OTTHUMG00000169674.4 25345 8890 126 ENSG00000123349.12 PFDN5 chr12 53295291 53299450 + protein_coding KNOWN OTTHUMG00000169675.3 4160 3380 76 ENSG00000257605.2 RP11-680A11.5 chr12 53298655 53300314 - antisense NOVEL OTTHUMG00000170029.2 1660 647 2 ENSG00000139637.12 C12orf10 chr12 53299686 53307177 + protein_coding KNOWN OTTHUMG00000170030.2 7492 2509 41 ENSG00000094914.11 AAAS chr12 53307456 53324864 - protein_coding KNOWN OTTHUMG00000169729.3 17409 4138 158 ENSG00000170374.5 SP7 chr12 53326575 53345315 - protein_coding KNOWN OTTHUMG00000170031.3 18741 3414 9 ENSG00000224261.2 RP11-179G5.1 chr1 160266340 160267225 - processed_pseudogene KNOWN OTTHUMG00000031608.2 886 886 1 ENSG00000185591.8 SP1 chr12 53380176 53416446 + protein_coding KNOWN OTTHUMG00000170047.3 36271 8083 17 ENSG00000280756.1 Metazoa_SRP chr12 53408146 53408400 - misc_RNA NOVEL NA 255 255 1 ENSG00000135409.9 AMHR2 chr12 53423855 53431534 + protein_coding KNOWN OTTHUMG00000170048.2 7680 3518 47 ENSG00000205352.9 PRR13 chr12 53441605 53446645 + protein_coding KNOWN OTTHUMG00000170049.2 5041 2897 46 ENSG00000257379.1 RP11-793H13.8 chr12 53441741 53467528 + processed_transcript NOVEL OTTHUMG00000170050.1 25788 1571 13 ENSG00000197111.14 PCBP2 chr12 53452102 53481162 + protein_coding KNOWN OTTHUMG00000169439.6 29061 7926 239 ENSG00000281445.1 PCBP2-OT1 chr12 53464468 53465057 + non_coding KNOWN OTTHUMG00000189729.1 590 590 1 ENSG00000273658.1 uc_338 chr12 53464720 53464901 + misc_RNA NOVEL NA 182 182 1 ENSG00000139625.11 MAP3K12 chr12 53479669 53500063 - protein_coding KNOWN OTTHUMG00000169854.3 20395 7971 77 ENSG00000270175.1 RP11-793H13.11 chr12 53500162 53500936 - antisense NOVEL OTTHUMG00000183931.1 775 775 1 ENSG00000162735.17 PEX19 chr1 160276812 160286348 - protein_coding KNOWN OTTHUMG00000033112.3 9537 4461 66 ENSG00000139546.9 TARBP2 chr12 53500921 53506431 + protein_coding KNOWN OTTHUMG00000169855.4 5511 4090 124 ENSG00000267281.2 RP11-793H13.10 chr12 53506688 53625979 - protein_coding KNOWN OTTHUMG00000182349.1 119292 2690 15 ENSG00000139574.8 NPFF chr12 53506690 53507638 - protein_coding KNOWN OTTHUMG00000169856.1 949 592 3 ENSG00000170653.17 ATF7 chr12 53507856 53626410 - protein_coding KNOWN OTTHUMG00000169776.5 118555 7980 73 ENSG00000257550.1 RP11-793H13.3 chr12 53513984 53517608 + antisense NOVEL OTTHUMG00000169858.1 3625 2297 3 ENSG00000275488.1 RP11-793H13.12 chr12 53574632 53576103 + processed_pseudogene KNOWN OTTHUMG00000187924.1 1472 807 2 ENSG00000135390.16 ATP5G2 chr12 53632726 53677408 - protein_coding KNOWN OTTHUMG00000133442.4 44683 3991 39 ENSG00000213470.4 RP11-972K6.1 chr12 53632788 53633151 - processed_pseudogene KNOWN OTTHUMG00000157575.1 364 364 1 ENSG00000012822.14 CALCOCO1 chr12 53708517 53727745 - protein_coding KNOWN OTTHUMG00000170095.4 19229 8898 148 ENSG00000260492.2 CISTR chr12 53750447 53757034 - lincRNA KNOWN OTTHUMG00000173078.2 6588 918 5 ENSG00000122218.13 COPA chr1 160289273 160343400 - protein_coding KNOWN OTTHUMG00000033111.2 54128 6232 84 ENSG00000260030.1 RP11-686F15.2 chr12 53754358 53762104 + lincRNA NOVEL OTTHUMG00000173079.1 7747 429 2 ENSG00000253053.1 RN7SKP289 chr12 53816185 53816479 + misc_RNA KNOWN NA 295 295 1 ENSG00000249641.2 HOXC13-AS chr12 53935328 53939643 - antisense NOVEL OTTHUMG00000160009.2 4316 1408 3 ENSG00000123364.4 HOXC13 chr12 53938765 53946544 + protein_coding KNOWN OTTHUMG00000160008.3 7780 2423 2 ENSG00000123407.3 HOXC12 chr12 53954834 53958956 + protein_coding KNOWN OTTHUMG00000160010.2 4123 3335 2 ENSG00000228630.4 HOTAIR chr12 53962308 53974956 - antisense KNOWN OTTHUMG00000152934.1 12649 2602 26 ENSG00000275589.1 HOTAIR_2 chr12 53963629 53963697 + misc_RNA NOVEL NA 69 69 1 ENSG00000277994.1 HOTAIR_3 chr12 53965965 53966061 + misc_RNA NOVEL NA 97 97 1 ENSG00000274817.1 HOTAIR_4 chr12 53968002 53968178 + misc_RNA NOVEL NA 177 177 1 ENSG00000277129.1 HOTAIR_5 chr12 53968351 53968501 + misc_RNA NOVEL NA 151 151 1 ENSG00000215785.2 CFL1P6 chr1 10990978 10991797 - processed_pseudogene KNOWN OTTHUMG00000002033.1 820 494 2 ENSG00000235082.2 SUMO1P3 chr1 160317403 160317706 + processed_pseudogene KNOWN OTTHUMG00000033120.2 304 304 1 ENSG00000123388.4 HOXC11 chr12 53973126 53977643 + protein_coding KNOWN OTTHUMG00000160011.3 4518 3265 4 ENSG00000251151.2 HOXC-AS3 chr12 53981509 53985519 - processed_transcript NOVEL OTTHUMG00000160025.1 4011 3109 8 ENSG00000180818.4 HOXC10 chr12 53985065 53990279 + protein_coding KNOWN OTTHUMG00000160031.2 5215 2331 10 ENSG00000273049.1 RP11-834C11.12 chr12 53985845 54034888 + protein_coding KNOWN OTTHUMG00000186015.1 49044 777 2 ENSG00000197757.7 HOXC6 chr12 53990624 54030823 + protein_coding KNOWN OTTHUMG00000160027.2 40200 3540 10 ENSG00000207924.2 MIR196A2 chr12 53991732 53991852 + miRNA KNOWN NA 121 121 1 ENSG00000250133.2 HOXC-AS2 chr12 53993810 53996785 - processed_transcript NOVEL OTTHUMG00000160030.2 2976 2216 4 ENSG00000180806.4 HOXC9 chr12 53994895 54003337 + protein_coding KNOWN OTTHUMG00000160033.1 8443 1679 7 ENSG00000250451.4 HOXC-AS1 chr12 53999022 54000010 - antisense KNOWN OTTHUMG00000160024.1 989 592 4 ENSG00000037965.5 HOXC8 chr12 54009106 54012362 + protein_coding KNOWN OTTHUMG00000160032.3 3257 1889 2 ENSG00000202078.1 Y_RNA chr1 160326104 160326216 - misc_RNA NOVEL NA 113 113 1 ENSG00000198353.7 HOXC4 chr12 54016931 54056030 + protein_coding KNOWN OTTHUMG00000160036.1 39100 2725 9 ENSG00000273046.1 RP11-834C11.14 chr12 54017110 54035361 + processed_transcript NOVEL OTTHUMG00000186499.1 18252 1389 2 ENSG00000260597.1 AC012531.25 chr12 54019910 54022589 + lincRNA NOVEL OTTHUMG00000173080.1 2680 2680 1 ENSG00000172789.3 HOXC5 chr12 54032853 54035358 + protein_coding KNOWN OTTHUMG00000160028.1 2506 1805 2 ENSG00000207571.1 MIR615 chr12 54033950 54034045 + miRNA KNOWN NA 96 96 1 ENSG00000248265.1 FLJ12825 chr12 54058254 54122234 + lincRNA NOVEL OTTHUMG00000160034.1 63981 3942 2 ENSG00000250654.6 RP11-834C11.7 chr12 54076838 54081903 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000160023.3 5066 1390 10 ENSG00000249388.1 RP11-834C11.6 chr12 54082118 54102693 + lincRNA NOVEL OTTHUMG00000160029.1 20576 528 2 ENSG00000250432.4 RP11-834C11.5 chr12 54085132 54125992 - lincRNA NOVEL OTTHUMG00000160026.1 40861 1124 11 ENSG00000202146.1 Y_RNA chr12 54099191 54099302 - misc_RNA NOVEL NA 112 112 1 ENSG00000162736.14 NCSTN chr1 160343272 160358952 + protein_coding KNOWN OTTHUMG00000033110.2 15681 4175 105 ENSG00000250742.1 RP11-834C11.4 chr12 54126098 54132843 + lincRNA NOVEL OTTHUMG00000160035.1 6746 1369 2 ENSG00000260470.1 RP11-834C11.11 chr12 54145069 54147225 - lincRNA NOVEL OTTHUMG00000172878.1 2157 2157 1 ENSG00000257534.1 RP11-834C11.10 chr12 54162065 54164452 - lincRNA NOVEL OTTHUMG00000170269.1 2388 754 2 ENSG00000248576.1 RP11-834C11.8 chr12 54163139 54168595 + antisense NOVEL OTTHUMG00000160022.1 5457 403 3 ENSG00000123415.13 SMUG1 chr12 54164745 54188994 - protein_coding KNOWN OTTHUMG00000160068.4 24250 4981 78 ENSG00000094916.12 CBX5 chr12 54230940 54280133 - protein_coding KNOWN OTTHUMG00000169700.2 49194 15040 23 ENSG00000265371.1 MIR3198-2 chr12 54231397 54231476 - miRNA KNOWN NA 80 80 1 ENSG00000241785.3 RN7SL390P chr12 54255627 54255910 - misc_RNA KNOWN NA 284 284 1 ENSG00000257596.1 RP11-968A15.2 chr12 54262615 54279063 + antisense NOVEL OTTHUMG00000169701.1 16449 735 2 ENSG00000258344.1 RP11-968A15.8 chr12 54276631 54345083 + sense_overlapping NOVEL OTTHUMG00000169929.1 68453 567 2 ENSG00000171786.5 NHLH1 chr1 160367067 160372848 + protein_coding KNOWN OTTHUMG00000033121.1 5782 2563 2 ENSG00000135486.16 HNRNPA1 chr12 54280193 54287088 + protein_coding KNOWN OTTHUMG00000169702.4 6896 5093 88 ENSG00000123405.12 NFE2 chr12 54292111 54301121 - protein_coding KNOWN OTTHUMG00000169761.1 9011 2469 15 ENSG00000111481.8 COPZ1 chr12 54301202 54351849 + protein_coding KNOWN OTTHUMG00000169762.2 50648 3901 131 ENSG00000207381.1 RNU6-950P chr12 54317781 54317887 - snRNA KNOWN NA 107 107 1 ENSG00000199122.2 MIR148B chr12 54337208 54337316 + miRNA KNOWN NA 109 109 1 ENSG00000264028.2 RN7SL744P chr12 54344610 54344876 + misc_RNA KNOWN NA 267 267 1 ENSG00000258137.4 RP11-753H16.3 chr12 54353661 54497688 + antisense NOVEL OTTHUMG00000169930.1 144028 924 7 ENSG00000258086.1 RP11-753H16.5 chr12 54353792 54466985 + antisense NOVEL OTTHUMG00000169931.1 113194 546 4 ENSG00000139572.3 GPR84 chr12 54362445 54364487 - protein_coding KNOWN OTTHUMG00000169839.1 2043 2043 3 ENSG00000161642.16 ZNF385A chr12 54369133 54391298 - protein_coding KNOWN OTTHUMG00000169840.1 22166 3179 92 ENSG00000201608.1 RNU4-42P chr1 160392768 160392909 - snRNA KNOWN NA 142 142 1 ENSG00000161638.9 ITGA5 chr12 54395261 54419460 - protein_coding KNOWN OTTHUMG00000169841.2 24200 7577 96 ENSG00000257477.1 LINC01154 chr12 54428303 54429403 + lincRNA NOVEL OTTHUMG00000169932.1 1101 454 2 ENSG00000170627.8 GTSF1 chr12 54455950 54473602 - protein_coding KNOWN OTTHUMG00000169842.1 17653 2524 61 ENSG00000123338.11 NCKAP1L chr12 54497711 54548238 + protein_coding KNOWN OTTHUMG00000169843.2 50528 10596 111 ENSG00000257824.1 RP11-1049A21.2 chr12 54543111 54544105 - antisense NOVEL OTTHUMG00000169933.1 995 577 2 ENSG00000123360.10 PDE1B chr12 54549350 54579239 + protein_coding KNOWN OTTHUMG00000169844.3 29890 7618 109 ENSG00000135447.15 PPP1R1A chr12 54575387 54588659 - protein_coding KNOWN OTTHUMG00000169934.3 13273 3982 24 ENSG00000257780.4 GLYCAM1 chr12 54608187 54610462 - unitary_pseudogene KNOWN OTTHUMG00000169935.2 2276 816 17 ENSG00000135413.7 LACRT chr12 54630811 54634895 - protein_coding KNOWN OTTHUMG00000169936.1 4085 882 17 ENSG00000161634.10 DCD chr12 54644591 54648493 - protein_coding KNOWN OTTHUMG00000169937.1 3903 876 17 ENSG00000162738.5 VANGL2 chr1 160400586 160428678 + protein_coding KNOWN OTTHUMG00000033122.1 28093 5340 11 ENSG00000257634.1 RP11-850F7.7 chr12 54682973 54687434 + lincRNA NOVEL OTTHUMG00000169938.1 4462 700 3 ENSG00000270858.1 VDAC1P5 chr12 54802746 54803589 - processed_pseudogene KNOWN OTTHUMG00000169848.2 844 844 1 ENSG00000172551.9 MUCL1 chr12 54830519 54858393 + protein_coding KNOWN OTTHUMG00000169815.2 27875 1250 19 ENSG00000135426.13 TESPA1 chr12 54948018 54984746 - protein_coding KNOWN OTTHUMG00000165407.1 36729 5025 113 ENSG00000257870.1 RP11-616L12.1 chr12 55009746 55014247 + lincRNA NOVEL OTTHUMG00000169825.1 4502 592 3 ENSG00000123307.3 NEUROD4 chr12 55019945 55030014 + protein_coding KNOWN OTTHUMG00000169826.1 10070 3953 2 ENSG00000196534.4 OR9K1P chr12 55115533 55116473 + unitary_pseudogene KNOWN OTTHUMG00000154383.1 941 941 1 ENSG00000257350.1 RP11-616L12.4 chr12 55122668 55124120 - processed_pseudogene KNOWN OTTHUMG00000169849.1 1453 1453 1 ENSG00000170605.5 OR9K2 chr12 55129681 55130802 + protein_coding KNOWN OTTHUMG00000169827.1 1122 1122 1 ENSG00000224622.1 OR9R1P chr12 55158847 55159723 + unprocessed_pseudogene KNOWN OTTHUMG00000154376.1 877 877 1 ENSG00000162739.12 SLAMF6 chr1 160485030 160523262 - protein_coding KNOWN OTTHUMG00000022729.1 38233 2746 23 ENSG00000227423.2 OR10U1P chr12 55193882 55194786 - unprocessed_pseudogene KNOWN OTTHUMG00000154304.1 905 905 1 ENSG00000179919.3 OR10A7 chr12 55221025 55221975 + protein_coding KNOWN OTTHUMG00000169860.1 951 951 1 ENSG00000197706.3 OR6C74 chr12 55247198 55248302 + protein_coding KNOWN OTTHUMG00000165162.1 1105 1105 1 ENSG00000213451.2 OR6C69P chr12 55262539 55263431 + unprocessed_pseudogene KNOWN OTTHUMG00000154374.1 893 893 1 ENSG00000205331.5 OR6C72P chr12 55283750 55284641 + unprocessed_pseudogene KNOWN OTTHUMG00000154372.1 892 892 1 ENSG00000188324.3 OR6C6 chr12 55294288 55295232 - protein_coding KNOWN OTTHUMG00000168101.1 945 945 1 ENSG00000230307.1 OR6C5P chr12 55311835 55312757 + unprocessed_pseudogene KNOWN OTTHUMG00000154364.1 923 923 1 ENSG00000205330.3 OR6C1 chr12 55320561 55321624 + protein_coding KNOWN OTTHUMG00000168102.2 1064 1064 1 ENSG00000205329.1 OR6C3 chr12 55331701 55332636 + protein_coding KNOWN OTTHUMG00000169861.1 936 936 1 ENSG00000257757.1 OR6C7P chr12 55342841 55343774 + unprocessed_pseudogene KNOWN OTTHUMG00000169885.1 934 934 1 ENSG00000234425.1 RP11-528G1.2 chr1 160537073 160571458 + antisense NOVEL OTTHUMG00000022789.1 34386 635 2 ENSG00000187857.3 OR6C75 chr12 55365111 55366049 + protein_coding KNOWN OTTHUMG00000169886.1 939 939 1 ENSG00000203408.3 OR6C71P chr12 55376824 55377736 - unprocessed_pseudogene KNOWN OTTHUMG00000154366.1 913 913 1 ENSG00000233606.1 OR6C66P chr12 55388445 55389374 + unprocessed_pseudogene KNOWN OTTHUMG00000154365.1 930 930 1 ENSG00000257414.1 OR6C73P chr12 55396340 55396697 + unprocessed_pseudogene KNOWN OTTHUMG00000169954.1 358 358 1 ENSG00000205328.2 OR6C65 chr12 55400430 55401505 + protein_coding KNOWN OTTHUMG00000169955.1 1076 1076 1 ENSG00000179899.8 PHC1P1 chr12 55411727 55414787 - processed_pseudogene KNOWN OTTHUMG00000170978.1 3061 3061 1 ENSG00000185821.3 OR6C76 chr12 55426254 55427192 + protein_coding KNOWN OTTHUMG00000169956.1 939 939 1 ENSG00000258763.4 RP11-110A12.2 chr12 55434734 55585471 - antisense NOVEL OTTHUMG00000170899.2 150738 681 13 ENSG00000179695.1 OR6C2 chr12 55452214 55453152 + protein_coding KNOWN OTTHUMG00000169957.1 939 939 1 ENSG00000184954.4 OR6C70 chr12 55469200 55470138 - protein_coding KNOWN OTTHUMG00000171127.1 939 939 1 ENSG00000066294.13 CD84 chr1 160541095 160579516 - protein_coding KNOWN OTTHUMG00000022788.2 38422 9255 45 ENSG00000205327.3 OR6C68 chr12 55492378 55493316 + protein_coding KNOWN OTTHUMG00000169958.1 939 939 1 ENSG00000234670.1 OR6C64P chr12 55522593 55523417 + unprocessed_pseudogene KNOWN OTTHUMG00000154363.1 825 825 1 ENSG00000179626.3 OR6C4 chr12 55551199 55552244 + protein_coding KNOWN OTTHUMG00000169959.1 1046 1046 1 ENSG00000179615.1 OR2AP1 chr12 55574415 55575344 + protein_coding KNOWN OTTHUMG00000169960.1 930 930 1 ENSG00000272937.1 OR6U2P chr12 55611623 55612554 + unprocessed_pseudogene KNOWN OTTHUMG00000185940.1 932 932 1 ENSG00000175398.2 OR10P1 chr12 55636860 55637854 + protein_coding KNOWN OTTHUMG00000169961.1 995 995 1 ENSG00000258921.1 RP11-644F5.16 chr12 55638912 55659795 - antisense NOVEL OTTHUMG00000170892.1 20884 488 2 ENSG00000272837.1 OR10AE3P chr12 55646195 55646663 - unprocessed_pseudogene KNOWN OTTHUMG00000185941.1 469 469 1 ENSG00000258907.2 RP11-644F5.15 chr12 55654558 55655168 - processed_pseudogene KNOWN OTTHUMG00000170893.2 611 611 1 ENSG00000270458.1 RP11-644F5.17 chr12 55662337 55662501 - processed_pseudogene KNOWN OTTHUMG00000184775.1 165 165 1 ENSG00000117090.13 SLAMF1 chr1 160608100 160647295 - protein_coding KNOWN OTTHUMG00000024006.1 39196 4269 20 ENSG00000170439.6 METTL7B chr12 55681546 55684611 + protein_coding KNOWN OTTHUMG00000152665.1 3066 1506 5 ENSG00000135424.14 ITGA7 chr12 55684568 55716043 - protein_coding KNOWN OTTHUMG00000170699.14 31476 6373 193 ENSG00000258311.4 RP11-644F5.10 chr12 55716036 55724703 + protein_coding NOVEL OTTHUMG00000170130.2 8668 3510 15 ENSG00000135441.6 BLOC1S1 chr12 55716037 55720087 + protein_coding KNOWN OTTHUMG00000169962.3 4051 1656 20 ENSG00000135437.8 RDH5 chr12 55720367 55724705 + protein_coding KNOWN OTTHUMG00000170126.3 4339 2983 36 ENSG00000135404.10 CD63 chr12 55725323 55729707 - protein_coding KNOWN OTTHUMG00000170454.4 4385 2633 102 ENSG00000258056.2 RP11-644F5.11 chr12 55729104 55730852 + antisense NOVEL OTTHUMG00000170187.2 1749 1443 2 ENSG00000258045.2 Metazoa_SRP chr12 55731264 55731531 - misc_RNA NOVEL NA 268 268 1 ENSG00000257384.1 RP11-644F5.12 chr12 55732366 55732648 - processed_pseudogene KNOWN OTTHUMG00000170455.1 283 283 1 ENSG00000135414.8 GDF11 chr12 55743280 55757278 + protein_coding KNOWN OTTHUMG00000170188.4 13999 8657 7 ENSG00000264181.1 AL713997.1 chr1 10998176 10998263 - miRNA NOVEL NA 88 88 1 ENSG00000235101.1 SETP9 chr1 160670148 160670979 + transcribed_processed_pseudogene KNOWN OTTHUMG00000024004.1 832 832 1 ENSG00000205323.7 SARNP chr12 55752463 55817756 - protein_coding KNOWN OTTHUMG00000170441.3 65294 3396 53 ENSG00000257390.4 RP11-762I7.5 chr12 55757275 55827546 - protein_coding NOVEL OTTHUMG00000170449.1 70272 2534 37 ENSG00000257509.1 RP11-762I7.4 chr12 55761550 55762628 - sense_intronic NOVEL OTTHUMG00000170442.1 1079 529 2 ENSG00000123353.8 ORMDL2 chr12 55817919 55821879 + protein_coding KNOWN OTTHUMG00000170202.1 3961 2810 17 ENSG00000135392.14 DNAJC14 chr12 55820960 55830824 - protein_coding KNOWN OTTHUMG00000170427.2 9865 4190 26 ENSG00000182796.11 TMEM198B chr12 55829745 55836246 + unitary_pseudogene KNOWN OTTHUMG00000154568.2 6502 3564 23 ENSG00000123342.14 MMP19 chr12 55835433 55842966 - protein_coding KNOWN OTTHUMG00000170216.2 7534 4672 53 ENSG00000257966.1 OLA1P3 chr12 55870048 55872602 - processed_pseudogene KNOWN OTTHUMG00000170206.1 2555 2555 1 ENSG00000265119.2 RN7SL676P chr12 55870941 55871219 - misc_RNA KNOWN NA 279 279 1 ENSG00000207339.1 RNU1-69P chr12 55874678 55874841 + snRNA KNOWN NA 164 164 1 ENSG00000228863.7 RP11-404F10.2 chr1 160670778 160699761 + antisense NOVEL OTTHUMG00000024005.10 28984 4121 48 ENSG00000257569.1 GSTP1P1 chr12 55900300 55900618 + processed_pseudogene KNOWN OTTHUMG00000170203.1 319 319 1 ENSG00000170473.15 WIBG chr12 55901413 55932618 - protein_coding KNOWN OTTHUMG00000170220.5 31206 2425 21 ENSG00000065357.18 DGKA chr12 55927319 55954027 + protein_coding KNOWN OTTHUMG00000170109.12 26709 10215 405 ENSG00000273973.1 RP11-973D8.5 chr12 55929170 55929729 + sense_intronic NOVEL OTTHUMG00000188623.1 560 560 1 ENSG00000185664.13 PMEL chr12 55954105 55973317 - protein_coding KNOWN OTTHUMG00000170573.4 19213 3901 123 ENSG00000123374.9 CDK2 chr12 55966769 55972784 + protein_coding KNOWN OTTHUMG00000170575.1 6016 3894 63 ENSG00000258554.1 RP11-973D8.4 chr12 55966838 55967474 - antisense NOVEL OTTHUMG00000170576.1 637 565 2 ENSG00000111540.14 RAB5B chr12 55973913 55996683 + protein_coding KNOWN OTTHUMG00000169682.2 22771 6588 47 ENSG00000237493.3 RP11-603J24.7 chr12 55980432 55981035 - processed_pseudogene KNOWN OTTHUMG00000170137.2 604 604 1 ENSG00000139531.11 SUOX chr12 55997180 56006641 + protein_coding KNOWN OTTHUMG00000128503.4 9462 5008 73 ENSG00000117091.8 CD48 chr1 160678746 160711851 - protein_coding KNOWN OTTHUMG00000024009.2 33106 3274 9 ENSG00000123411.13 IKZF4 chr12 56007659 56038435 + protein_coding KNOWN OTTHUMG00000170132.2 30777 6808 78 ENSG00000273890.1 RP11-603J24.21 chr12 56010091 56010574 - antisense NOVEL OTTHUMG00000187395.1 484 484 1 ENSG00000257449.1 RP11-603J24.4 chr12 56029649 56041806 - antisense NOVEL OTTHUMG00000170138.1 12158 300 2 ENSG00000197728.8 RPS26 chr12 56041853 56044675 + protein_coding KNOWN OTTHUMG00000170139.2 2823 1943 12 ENSG00000065361.13 ERBB3 chr12 56079857 56103505 + protein_coding KNOWN OTTHUMG00000170140.6 23649 8658 175 ENSG00000257411.1 RP11-603J24.9 chr12 56101331 56109289 + protein_coding PUTATIVE OTTHUMG00000170152.3 7959 489 6 ENSG00000170515.12 PA2G4 chr12 56104319 56113907 + protein_coding KNOWN OTTHUMG00000170173.2 9589 3795 42 ENSG00000257553.1 RP11-603J24.17 chr12 56104614 56113905 - antisense NOVEL OTTHUMG00000170262.1 9292 434 2 ENSG00000229117.7 RPL41 chr12 56116586 56117943 + protein_coding KNOWN OTTHUMG00000170183.1 1358 1088 19 ENSG00000135482.5 ZC3H10 chr12 56118159 56127514 + protein_coding KNOWN OTTHUMG00000170184.4 9356 8464 13 ENSG00000026751.15 SLAMF7 chr1 160739057 160754821 + protein_coding KNOWN OTTHUMG00000024008.3 15765 4833 52 ENSG00000139641.11 ESYT1 chr12 56118250 56144671 + protein_coding KNOWN OTTHUMG00000170197.1 26422 5493 98 ENSG00000258345.1 RP11-603J24.6 chr12 56118968 56119939 - antisense NOVEL OTTHUMG00000170141.1 972 470 2 ENSG00000258317.1 RP11-603J24.5 chr12 56120033 56129619 - antisense NOVEL OTTHUMG00000170142.1 9587 1294 6 ENSG00000257809.1 RP11-603J24.14 chr12 56150796 56158220 - antisense NOVEL OTTHUMG00000170198.1 7425 540 3 ENSG00000196465.9 MYL6B chr12 56152256 56159647 + protein_coding KNOWN OTTHUMG00000170199.5 7392 3259 52 ENSG00000092841.17 MYL6 chr12 56158161 56163496 + protein_coding KNOWN OTTHUMG00000170200.7 5336 4609 108 ENSG00000258199.1 RP11-977G19.5 chr12 56162359 56190284 - sense_overlapping NOVEL OTTHUMG00000170287.1 27926 403 2 ENSG00000139613.10 SMARCC2 chr12 56162983 56189567 - protein_coding KNOWN OTTHUMG00000170288.4 26585 8555 199 ENSG00000181852.16 RNF41 chr12 56202175 56221933 - protein_coding KNOWN OTTHUMG00000170328.2 19759 6537 70 ENSG00000139579.11 NABP2 chr12 56222015 56229854 + protein_coding KNOWN OTTHUMG00000152527.4 7840 2218 38 ENSG00000275801.1 RP11-404F10.6 chr1 160775954 160776608 - unprocessed_pseudogene KNOWN OTTHUMG00000187539.1 655 523 2 ENSG00000139540.10 SLC39A5 chr12 56230049 56237846 + protein_coding KNOWN OTTHUMG00000156962.3 7798 2903 59 ENSG00000139645.9 ANKRD52 chr12 56237807 56258391 - protein_coding KNOWN OTTHUMG00000170329.2 20585 8820 41 ENSG00000135469.12 COQ10A chr12 56266858 56270966 + protein_coding KNOWN OTTHUMG00000170283.3 4109 3243 35 ENSG00000258260.1 RP11-977G19.14 chr12 56267793 56270104 - antisense NOVEL OTTHUMG00000170434.1 2312 542 2 ENSG00000062485.17 CS chr12 56271699 56300392 - protein_coding KNOWN OTTHUMG00000170344.7 28694 6402 191 ENSG00000144785.7 RP11-977G19.10 chr12 56285916 56316059 - protein_coding PUTATIVE OTTHUMG00000170347.1 30144 1053 18 ENSG00000257303.1 RP11-977G19.11 chr12 56300142 56314808 + antisense NOVEL OTTHUMG00000170366.1 14667 576 5 ENSG00000257740.1 RP11-977G19.12 chr12 56308868 56309449 + antisense NOVEL OTTHUMG00000170367.1 582 437 2 ENSG00000257727.4 CNPY2 chr12 56309842 56316336 - protein_coding KNOWN OTTHUMG00000170330.3 6495 2956 44 ENSG00000135473.13 PAN2 chr12 56316223 56334053 - protein_coding KNOWN OTTHUMG00000170412.4 17831 7288 219 ENSG00000274562.1 RP11-404F10.5 chr1 160776975 160780140 - unprocessed_pseudogene KNOWN OTTHUMG00000187540.1 3166 555 2 ENSG00000110944.7 IL23A chr12 56334174 56340410 + protein_coding KNOWN OTTHUMG00000187402.1 6237 1187 14 ENSG00000170581.12 STAT2 chr12 56341597 56360155 - protein_coding KNOWN OTTHUMG00000170760.3 18559 6109 114 ENSG00000252206.1 RNU7-40P chr12 56352387 56352450 - snRNA KNOWN NA 64 64 1 ENSG00000175336.9 APOF chr12 56360569 56362823 - protein_coding KNOWN OTTHUMG00000170715.1 2255 1715 2 ENSG00000274823.1 RP11-348M3.6 chr12 56376818 56377331 - processed_pseudogene KNOWN OTTHUMG00000188037.1 514 514 1 ENSG00000259099.2 RP11-348M3.2 chr12 56380361 56382711 - processed_pseudogene KNOWN OTTHUMG00000170716.2 2351 1653 4 ENSG00000276272.1 RP11-121C6.5 chr12 56411944 56413190 - lincRNA NOVEL OTTHUMG00000187926.1 1247 1247 1 ENSG00000274569.1 RP11-121C6.4 chr12 56413647 56414045 - processed_pseudogene KNOWN OTTHUMG00000187927.1 399 399 1 ENSG00000111602.10 TIMELESS chr12 56416373 56449403 - protein_coding KNOWN OTTHUMG00000170600.5 33031 5818 76 ENSG00000135517.6 MIP chr12 56449502 56469166 - protein_coding KNOWN OTTHUMG00000170571.3 19665 3348 7 ENSG00000122224.16 LY9 chr1 160796074 160828261 + protein_coding KNOWN OTTHUMG00000024007.6 32188 9118 56 ENSG00000176422.12 SPRYD4 chr12 56468567 56479707 + protein_coding KNOWN OTTHUMG00000187405.3 11141 10779 5 ENSG00000135423.11 GLS2 chr12 56470944 56488414 - protein_coding KNOWN OTTHUMG00000140379.2 17471 4141 171 ENSG00000257576.1 RP11-153M3.1 chr12 56511002 56512703 + processed_pseudogene KNOWN OTTHUMG00000170572.1 1702 1702 1 ENSG00000076067.10 RBMS2 chr12 56521929 56596196 + protein_coding KNOWN OTTHUMG00000170488.5 74268 8805 79 ENSG00000201579.1 RNU6-343P chr12 56588518 56588621 + snRNA KNOWN NA 104 104 1 ENSG00000076108.10 BAZ2A chr12 56595596 56636816 - protein_coding KNOWN OTTHUMG00000170332.4 41221 10918 148 ENSG00000110955.7 ATP5B chr12 56638175 56646068 - protein_coding KNOWN OTTHUMG00000170291.4 7894 2322 57 ENSG00000207031.1 SNORD59A chr12 56645027 56645101 - snoRNA KNOWN NA 75 75 1 ENSG00000110958.14 PTGES3 chr12 56663341 56688408 - protein_coding KNOWN OTTHUMG00000170217.2 25068 3399 53 ENSG00000241217.3 RN7SL809P chr12 56670450 56670746 - misc_RNA KNOWN NA 297 297 1 ENSG00000122223.11 CD244 chr1 160830160 160862855 - protein_coding KNOWN OTTHUMG00000028606.3 32696 2857 39 ENSG00000196531.9 NACA chr12 56712428 56731628 - protein_coding KNOWN OTTHUMG00000170033.5 19201 10008 125 ENSG00000198056.12 PRIM1 chr12 56731596 56752373 - protein_coding KNOWN OTTHUMG00000170034.4 20778 2437 56 ENSG00000025423.10 HSD17B6 chr12 56752161 56787790 + protein_coding KNOWN OTTHUMG00000170854.3 35630 2272 42 ENSG00000258679.1 RP11-74M13.4 chr12 56822985 56874268 + transcribed_processed_pseudogene KNOWN OTTHUMG00000170894.1 51284 3942 3 ENSG00000273536.1 RP11-74M13.6 chr12 56840973 56841273 - processed_pseudogene KNOWN OTTHUMG00000187903.1 301 301 1 ENSG00000258816.1 RP11-74M13.3 chr12 56855694 56855886 + unprocessed_pseudogene KNOWN OTTHUMG00000170882.1 193 193 1 ENSG00000212383.1 SNORA48 chr12 56861375 56861508 + snoRNA NOVEL NA 134 134 1 ENSG00000170426.1 SDR9C7 chr12 56923154 56934405 - protein_coding KNOWN OTTHUMG00000171004.1 11252 1765 4 ENSG00000278400.1 RP11-474N8.9 chr12 56941174 56941482 - processed_pseudogene KNOWN OTTHUMG00000187928.1 309 309 1 ENSG00000139547.7 RDH16 chr12 56951431 56959374 - protein_coding KNOWN OTTHUMG00000170895.2 7944 3464 7 ENSG00000226003.2 RP11-312J18.3 chr1 160848010 160848502 + processed_pseudogene KNOWN OTTHUMG00000028598.2 493 493 1 ENSG00000278399.1 RP11-74M13.5 chr12 56981211 56985960 - unprocessed_pseudogene KNOWN OTTHUMG00000187900.1 4750 926 4 ENSG00000166856.2 GPR182 chr12 56994446 56998441 + protein_coding KNOWN OTTHUMG00000171005.2 3996 3451 5 ENSG00000166860.2 ZBTB39 chr12 56998834 57006446 - protein_coding KNOWN OTTHUMG00000171007.1 7613 6170 2 ENSG00000166863.10 TAC3 chr12 57010000 57028883 - protein_coding KNOWN OTTHUMG00000156958.1 18884 1574 84 ENSG00000166866.11 MYO1A chr12 57028517 57051198 - protein_coding KNOWN OTTHUMG00000149899.3 22682 4438 104 ENSG00000166881.8 TMEM194A chr12 57055643 57088063 - protein_coding KNOWN OTTHUMG00000171021.1 32421 5708 28 ENSG00000166886.11 NAB2 chr12 57088894 57095476 + protein_coding KNOWN OTTHUMG00000171192.1 6583 3010 20 ENSG00000166888.9 STAT6 chr12 57095408 57132139 - protein_coding KNOWN OTTHUMG00000171194.5 36732 7298 235 ENSG00000123384.12 LRP1 chr12 57128493 57213351 + protein_coding KNOWN OTTHUMG00000044412.6 84859 20839 152 ENSG00000259125.1 RP11-545N8.3 chr12 57144620 57147619 - antisense NOVEL OTTHUMG00000171280.1 3000 879 4 ENSG00000179914.4 ITLN1 chr1 160876539 160885170 - protein_coding KNOWN OTTHUMG00000028604.2 8632 1483 13 ENSG00000221365.1 MIR1228 chr12 57194504 57194576 + miRNA KNOWN NA 73 73 1 ENSG00000182379.9 NXPH4 chr12 57216795 57226449 + protein_coding KNOWN OTTHUMG00000171241.1 9655 2150 7 ENSG00000182199.9 SHMT2 chr12 57229327 57234935 + protein_coding KNOWN OTTHUMG00000171246.13 5609 4838 238 ENSG00000276727.1 RP11-123K3.9 chr12 57229498 57230198 - antisense NOVEL OTTHUMG00000187451.1 701 701 1 ENSG00000185633.9 NDUFA4L2 chr12 57234903 57240715 - protein_coding KNOWN OTTHUMG00000171275.4 5813 2806 23 ENSG00000185482.6 STAC3 chr12 57243453 57251193 - protein_coding KNOWN OTTHUMG00000171271.3 7741 2096 52 ENSG00000258830.1 RP11-123K3.4 chr12 57249609 57296484 - protein_coding NOVEL OTTHUMG00000171276.2 46876 2107 15 ENSG00000179912.18 R3HDM2 chr12 57253762 57431005 - protein_coding KNOWN OTTHUMG00000171568.4 177244 6039 184 ENSG00000201198.1 RNU6-879P chr12 57415296 57415403 + snRNA KNOWN NA 108 108 1 ENSG00000258001.1 RP11-756H6.1 chr12 57431116 57433935 + lincRNA NOVEL OTTHUMG00000169993.1 2820 548 2 ENSG00000281322.1 Y_RNA chr1 10999862 10999945 - misc_RNA NOVEL NA 84 84 1 ENSG00000213080.3 RP11-312J18.5 chr1 160894980 160896076 + processed_pseudogene KNOWN OTTHUMG00000028599.1 1097 1097 1 ENSG00000175189.3 INHBC chr12 57434760 57450828 + protein_coding KNOWN OTTHUMG00000169994.1 16069 1992 2 ENSG00000139269.2 INHBE chr12 57452323 57459280 + protein_coding KNOWN OTTHUMG00000169995.1 6958 3015 10 ENSG00000111087.8 GLI1 chr12 57460135 57472262 + protein_coding KNOWN OTTHUMG00000167332.1 12128 4204 57 ENSG00000123329.16 ARHGAP9 chr12 57472255 57488814 - protein_coding KNOWN OTTHUMG00000150147.4 16560 5127 194 ENSG00000166986.11 MARS chr12 57475445 57517569 + protein_coding KNOWN OTTHUMG00000169996.4 42125 7028 210 ENSG00000275657.1 MIR6758 chr12 57512688 57512750 + miRNA KNOWN NA 63 63 1 ENSG00000175197.9 DDIT3 chr12 57516588 57520517 - protein_coding KNOWN OTTHUMG00000170046.2 3930 1266 27 ENSG00000208028.1 MIR616 chr12 57519163 57519259 - miRNA KNOWN NA 97 97 1 ENSG00000166987.13 MBD6 chr12 57520710 57530148 + protein_coding KNOWN OTTHUMG00000170099.2 9439 5646 69 ENSG00000175203.14 DCTN2 chr12 57530102 57547331 - protein_coding KNOWN OTTHUMG00000170124.4 17230 4217 164 ENSG00000232188.1 RP11-312J18.6 chr1 160931739 160934380 - lincRNA NOVEL OTTHUMG00000028600.1 2642 575 2 ENSG00000155980.10 KIF5A chr12 57549998 57586632 + protein_coding KNOWN OTTHUMG00000170143.1 36635 6261 57 ENSG00000166908.16 PIP4K2C chr12 57591174 57603418 + protein_coding KNOWN OTTHUMG00000170144.3 12245 3299 61 ENSG00000178498.14 DTX3 chr12 57604622 57609804 + protein_coding KNOWN OTTHUMG00000170189.1 5183 4087 41 ENSG00000240771.5 ARHGEF25 chr12 57610180 57619379 + protein_coding KNOWN OTTHUMG00000152516.3 9200 3503 71 ENSG00000224713.4 AC025165.8 chr12 57612118 57619638 - antisense NOVEL OTTHUMG00000152518.4 7521 2600 10 ENSG00000135502.15 SLC26A10 chr12 57619527 57626151 + protein_coding KNOWN OTTHUMG00000128505.3 6625 4276 77 ENSG00000135454.12 B4GALNT1 chr12 57623410 57633355 - protein_coding KNOWN OTTHUMG00000170190.4 9946 8003 98 ENSG00000242990.2 RPL13AP23 chr12 57674665 57675250 + processed_pseudogene KNOWN OTTHUMG00000157582.2 586 586 1 ENSG00000135506.14 OS9 chr12 57693955 57721557 + protein_coding KNOWN OTTHUMG00000170284.1 27603 5169 186 ENSG00000257342.1 RP11-571M6.7 chr12 57694132 57721510 - antisense NOVEL OTTHUMG00000170379.1 27379 699 2 ENSG00000198358.4 RP11-544M22.1 chr1 160932465 160949922 + antisense NOVEL OTTHUMG00000028603.1 17458 2136 6 ENSG00000135439.10 AGAP2 chr12 57723761 57742157 - protein_coding KNOWN OTTHUMG00000170285.4 18397 6728 60 ENSG00000255737.2 AGAP2-AS1 chr12 57726271 57728356 + antisense KNOWN OTTHUMG00000170286.1 2086 1500 2 ENSG00000135452.8 TSPAN31 chr12 57738013 57750211 + protein_coding KNOWN OTTHUMG00000170381.1 12199 5385 62 ENSG00000135446.15 CDK4 chr12 57747727 57756013 - protein_coding KNOWN OTTHUMG00000170382.4 8287 3168 77 ENSG00000139266.5 MARCH9 chr12 57755098 57760407 + protein_coding KNOWN OTTHUMG00000170456.1 5310 4005 8 ENSG00000111012.8 CYP27B1 chr12 57762334 57768986 - protein_coding KNOWN OTTHUMG00000170457.2 6653 3440 34 ENSG00000037897.15 METTL1 chr12 57768471 57772793 - protein_coding KNOWN OTTHUMG00000150143.4 4323 2621 32 ENSG00000123427.14 METTL21B chr12 57771492 57782798 + protein_coding KNOWN OTTHUMG00000170459.1 11307 3177 19 ENSG00000257921.4 RP11-571M6.15 chr12 57773028 57787046 + protein_coding NOVEL OTTHUMG00000170460.2 14019 679 13 ENSG00000123297.15 TSFM chr12 57782589 57808071 + protein_coding KNOWN OTTHUMG00000153042.9 25483 3094 60 ENSG00000233691.2 RP11-312J18.7 chr1 160935537 160936126 + processed_pseudogene KNOWN OTTHUMG00000028601.2 590 590 1 ENSG00000135407.9 AVIL chr12 57797376 57818704 - protein_coding KNOWN OTTHUMG00000170461.2 21329 5889 76 ENSG00000270039.1 RP11-571M6.17 chr12 57803838 57804415 + lincRNA NOVEL OTTHUMG00000183984.1 578 578 1 ENSG00000206749.1 RNU6-1083P chr12 57806154 57806260 - snRNA KNOWN NA 107 107 1 ENSG00000269903.1 RP11-571M6.18 chr12 57814494 57814926 + lincRNA NOVEL OTTHUMG00000183985.1 433 433 1 ENSG00000175215.8 CTDSP2 chr12 57819927 57846739 - protein_coding KNOWN OTTHUMG00000170483.1 26813 5442 52 ENSG00000207789.1 MIR26A2 chr12 57824609 57824692 - miRNA KNOWN NA 84 84 1 ENSG00000257953.1 RP11-620J15.1 chr12 57837092 57842745 + antisense NOVEL OTTHUMG00000170484.1 5654 610 2 ENSG00000245651.2 RP11-620J15.2 chr12 57869835 57896482 - lincRNA NOVEL OTTHUMG00000170485.2 26648 3843 6 ENSG00000273805.1 RP11-620J15.4 chr12 57894232 57896846 + antisense NOVEL OTTHUMG00000187457.1 2615 1315 2 ENSG00000257698.1 RP11-620J15.3 chr12 57931528 57936175 - lincRNA NOVEL OTTHUMG00000170492.1 4648 1312 9 ENSG00000158764.6 ITLN2 chr1 160945025 160954799 - protein_coding KNOWN OTTHUMG00000028605.1 9775 1636 14 ENSG00000166896.6 XRCC6BP1 chr12 57941541 57957269 + protein_coding KNOWN OTTHUMG00000170493.1 15729 1373 17 ENSG00000257159.1 RP11-58A17.3 chr12 57967058 57968399 + processed_pseudogene KNOWN OTTHUMG00000170494.1 1342 633 2 ENSG00000222210.1 RN7SKP65 chr12 57977965 57978277 - misc_RNA KNOWN NA 313 313 1 ENSG00000257668.1 RP11-58A17.2 chr12 57983795 57984761 - processed_pseudogene KNOWN OTTHUMG00000170495.1 967 967 1 ENSG00000257541.1 RP11-58A17.4 chr12 58087892 58093362 + lincRNA NOVEL OTTHUMG00000170496.2 5471 484 4 ENSG00000279134.1 RP11-489P6.1 chr12 58094914 58098013 - TEC KNOWN OTTHUMG00000172889.1 3100 3100 1 ENSG00000279411.1 RP11-489P6.2 chr12 58103907 58105935 + TEC KNOWN OTTHUMG00000172890.1 2029 2029 1 ENSG00000241423.2 RPL21P103 chr12 58244378 58244865 + processed_pseudogene KNOWN OTTHUMG00000157583.2 488 488 1 ENSG00000258133.1 RP11-340M11.1 chr12 58394596 58395138 + processed_pseudogene KNOWN OTTHUMG00000169939.2 543 543 1 ENSG00000258231.4 RP11-362K2.2 chr12 58544124 58813060 + lincRNA NOVEL OTTHUMG00000169963.2 268937 1729 24 ENSG00000158769.16 F11R chr1 160995211 161021348 - protein_coding KNOWN OTTHUMG00000028602.3 26138 5066 43 ENSG00000257259.1 RP11-767I20.1 chr12 58565960 58781747 - lincRNA NOVEL OTTHUMG00000169964.1 215788 2366 12 ENSG00000139263.10 LRIG3 chr12 58872149 58920522 - protein_coding KNOWN OTTHUMG00000169940.1 48374 5893 75 ENSG00000257443.1 RP11-150C16.1 chr12 58920639 59064238 + antisense NOVEL OTTHUMG00000169941.1 143600 555 4 ENSG00000244390.2 RPS6P22 chr12 59020169 59020894 + processed_pseudogene KNOWN OTTHUMG00000157585.2 726 726 1 ENSG00000257288.1 RP11-557F20.2 chr12 59052980 59054184 - processed_pseudogene KNOWN OTTHUMG00000169942.1 1205 1205 1 ENSG00000258214.1 RP11-272B17.1 chr12 59366218 59411171 - lincRNA NOVEL OTTHUMG00000169921.1 44954 348 4 ENSG00000212599.1 RNU6-279P chr12 59369051 59369151 - snRNA KNOWN NA 101 101 1 ENSG00000251931.1 RNU6-871P chr12 59450673 59450772 - snRNA KNOWN NA 100 100 1 ENSG00000257230.1 RP11-272B17.2 chr12 59523278 59524184 - lincRNA NOVEL OTTHUMG00000169922.1 907 583 3 ENSG00000266724.1 AC108721.2 chr12 59528059 59528141 - miRNA NOVEL NA 83 83 1 ENSG00000270149.4 RP11-544M22.13 chr1 160997957 161038962 - protein_coding NOVEL OTTHUMG00000183896.1 41006 2114 20 ENSG00000265430.1 AC108721.1 chr12 59528177 59528268 - miRNA NOVEL NA 92 92 1 ENSG00000202471.1 RNU4-20P chr12 59586793 59586943 - snRNA KNOWN NA 151 151 1 ENSG00000118596.10 SLC16A7 chr12 59596067 59789855 + protein_coding KNOWN OTTHUMG00000169923.4 193789 13665 80 ENSG00000257146.1 RP11-813P10.1 chr12 59719698 59719944 - processed_pseudogene KNOWN OTTHUMG00000169924.1 247 247 1 ENSG00000237176.4 RP11-813P10.2 chr12 59812102 59812576 + processed_pseudogene KNOWN OTTHUMG00000169925.1 475 475 1 ENSG00000280886.1 AC091517.1 chr12 60026771 60026857 - miRNA NOVEL NA 87 87 1 ENSG00000257294.2 RP11-316A16.1 chr12 60092864 60096071 + lincRNA NOVEL OTTHUMG00000169926.2 3208 989 2 ENSG00000258184.1 RP11-335M9.1 chr12 60215994 60216384 + processed_pseudogene KNOWN OTTHUMG00000169927.1 391 391 1 ENSG00000252607.1 Y_RNA chr12 60341824 60341941 - misc_RNA NOVEL NA 118 118 1 ENSG00000251822.1 SNORA19 chr12 60363822 60363935 + snoRNA NOVEL NA 114 114 1 ENSG00000232879.2 RP11-544M22.3 chr1 161034834 161035006 + processed_pseudogene KNOWN OTTHUMG00000031474.2 173 173 1 ENSG00000257865.1 RP11-154D9.1 chr12 60418983 60419293 + processed_pseudogene KNOWN OTTHUMG00000169928.1 311 311 1 ENSG00000257308.1 RP11-471N19.1 chr12 61231159 61232937 - processed_pseudogene KNOWN OTTHUMG00000169972.1 1779 1779 1 ENSG00000258336.1 RP11-410B16.1 chr12 61600450 61600843 - processed_pseudogene KNOWN OTTHUMG00000169973.1 394 394 1 ENSG00000198673.9 FAM19A2 chr12 61708259 62279150 - protein_coding KNOWN OTTHUMG00000170207.5 570892 9255 67 ENSG00000242922.2 RPL21P104 chr12 61775923 61776400 + processed_pseudogene KNOWN OTTHUMG00000157593.2 478 478 1 ENSG00000257528.1 KRT8P19 chr12 61879318 61880772 + processed_pseudogene KNOWN OTTHUMG00000170204.1 1455 1455 1 ENSG00000213363.4 RPS3P6 chr12 62021570 62022174 - processed_pseudogene KNOWN OTTHUMG00000157595.1 605 605 1 ENSG00000257880.1 RP11-769N19.2 chr12 62139999 62145643 - sense_intronic NOVEL OTTHUMG00000170224.1 5645 477 2 ENSG00000258316.1 KLF17P1 chr12 62234390 62235515 - processed_pseudogene KNOWN OTTHUMG00000170205.1 1126 1126 1 ENSG00000135655.12 USP15 chr12 62260338 62417431 + protein_coding KNOWN OTTHUMG00000170186.5 157094 19418 119 ENSG00000215845.9 TSTD1 chr1 161037631 161038990 - protein_coding KNOWN OTTHUMG00000031476.3 1360 1210 21 ENSG00000276811.1 MIR6125 chr12 62260359 62260454 + miRNA KNOWN NA 96 96 1 ENSG00000200814.1 RNU6-595P chr12 62334091 62334197 - snRNA KNOWN NA 107 107 1 ENSG00000275881.1 Metazoa_SRP chr12 62393607 62393880 - misc_RNA NOVEL NA 274 274 1 ENSG00000061987.13 MON2 chr12 62466817 62600479 + protein_coding KNOWN OTTHUMG00000169992.6 133663 16014 227 ENSG00000257568.1 RP11-863H1.1 chr12 62482349 62484932 - antisense NOVEL OTTHUMG00000170015.1 2584 848 2 ENSG00000202034.1 RNU6-399P chr12 62545582 62545679 - snRNA KNOWN NA 98 98 1 ENSG00000221949.5 LINC01465 chr12 62601751 62603690 - lincRNA KNOWN OTTHUMG00000169983.2 1940 1940 2 ENSG00000257354.2 RP11-631N16.2 chr12 62602752 62622213 + lincRNA NOVEL OTTHUMG00000169989.2 19462 8693 2 ENSG00000199179.2 MIRLET7I chr12 62603671 62603778 + miRNA KNOWN NA 108 108 1 ENSG00000275180.1 RP11-631N16.4 chr12 62603909 62604399 + lincRNA NOVEL OTTHUMG00000187150.1 491 491 1 ENSG00000158773.13 USF1 chr1 161039251 161045977 - protein_coding KNOWN OTTHUMG00000031472.2 6727 2336 87 ENSG00000111110.10 PPM1H chr12 62643982 62935037 - protein_coding KNOWN OTTHUMG00000169990.2 291056 7063 27 ENSG00000241941.2 RPL32P26 chr12 62658823 62659225 + processed_pseudogene KNOWN OTTHUMG00000157597.2 403 403 1 ENSG00000213352.3 GAPDHP44 chr12 62755227 62756233 + processed_pseudogene KNOWN OTTHUMG00000160001.1 1007 1007 1 ENSG00000200296.1 RNU1-83P chr12 62850738 62850901 - snRNA KNOWN NA 164 164 1 ENSG00000275729.1 AC078814.1 chr12 62934507 62934607 - miRNA NOVEL NA 101 101 1 ENSG00000252660.1 Y_RNA chr12 62935701 62935802 + misc_RNA NOVEL NA 102 102 1 ENSG00000139239.7 RPL14P1 chr12 62965325 62965969 + processed_pseudogene KNOWN OTTHUMG00000157598.1 645 645 1 ENSG00000257779.1 RP11-848D3.4 chr12 63002469 63002795 + processed_pseudogene KNOWN OTTHUMG00000169977.1 327 327 1 ENSG00000250517.2 LDHAL6CP chr12 63003553 63006902 + transcribed_processed_pseudogene KNOWN OTTHUMG00000160114.2 3350 3350 2 ENSG00000257235.1 RP11-848D3.5 chr12 63004338 63006541 - lincRNA NOVEL OTTHUMG00000169978.1 2204 535 3 ENSG00000120948.14 TARDBP chr1 11012344 11026420 + protein_coding KNOWN OTTHUMG00000002120.13 14077 6071 130 ENSG00000186517.12 ARHGAP30 chr1 161046946 161069970 - protein_coding KNOWN OTTHUMG00000031477.3 23025 5064 63 ENSG00000257664.1 RSL24D1P5 chr12 63055275 63055765 - processed_pseudogene KNOWN OTTHUMG00000169979.1 491 491 1 ENSG00000276315.1 AC135584.1 chr12 63120335 63120416 + miRNA NOVEL NA 82 82 1 ENSG00000166148.3 AVPR1A chr12 63142759 63150942 - protein_coding KNOWN OTTHUMG00000169980.2 8184 5963 5 ENSG00000279444.1 RP11-715H19.2 chr12 63151065 63154006 + TEC KNOWN OTTHUMG00000169981.1 2942 333 3 ENSG00000257332.1 HNRNPA1P69 chr12 63271404 63272336 + processed_pseudogene KNOWN OTTHUMG00000169982.1 933 933 1 ENSG00000258117.2 RP11-1022B3.1 chr12 63292625 63360037 - lincRNA NOVEL OTTHUMG00000169974.2 67413 474 2 ENSG00000177990.10 DPY19L2 chr12 63558913 63668939 - protein_coding KNOWN OTTHUMG00000168712.3 110027 5646 72 ENSG00000249753.2 RP11-415I12.3 chr12 63623788 63795718 - antisense NOVEL OTTHUMG00000168726.1 171931 275 2 ENSG00000257005.1 RP11-972L6.2 chr12 63651627 63651930 + processed_pseudogene KNOWN OTTHUMG00000168727.1 304 304 1 ENSG00000255583.2 RP11-415I12.2 chr12 63682523 63724935 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000168728.2 42413 2911 7 ENSG00000278883.1 AL591806.1 chr1 161065865 161066153 + protein_coding KNOWN NA 289 150 2 ENSG00000240027.2 RP11-415I12.1 chr12 63760358 63760612 - processed_pseudogene KNOWN OTTHUMG00000157600.2 255 255 1 ENSG00000118600.10 TMEM5 chr12 63779803 63809558 + protein_coding KNOWN OTTHUMG00000168730.1 29756 7804 32 ENSG00000255850.1 TMEM5-AS1 chr12 63808845 63822156 - antisense NOVEL OTTHUMG00000168731.1 13312 563 4 ENSG00000255642.1 PABPC1P4 chr12 63822021 63823895 + processed_pseudogene KNOWN OTTHUMG00000168749.1 1875 1875 1 ENSG00000275027.1 AC084357.1 chr12 63824238 63824294 + miRNA NOVEL NA 57 57 1 ENSG00000281594.1 AC084357.2 chr12 63830754 63830823 - miRNA NOVEL NA 70 70 1 ENSG00000196935.7 SRGAP1 chr12 63844293 64162221 + protein_coding KNOWN OTTHUMG00000168750.2 317929 26641 81 ENSG00000242087.2 RPL36AP41 chr12 63871739 63872044 - processed_pseudogene KNOWN OTTHUMG00000157601.2 306 306 1 ENSG00000256571.1 RP11-274J7.2 chr12 63878787 63879474 + sense_intronic NOVEL OTTHUMG00000168751.1 688 515 2 ENSG00000256399.1 RP11-274J7.3 chr12 63887379 63888598 - processed_pseudogene KNOWN OTTHUMG00000168752.1 1220 1220 1 ENSG00000143217.8 PVRL4 chr1 161070995 161089599 - protein_coding KNOWN OTTHUMG00000031475.1 18605 3502 12 ENSG00000255780.1 RP11-1029F8.1 chr12 64032412 64032665 + processed_pseudogene KNOWN OTTHUMG00000168753.1 254 254 1 ENSG00000255886.1 RP11-196H14.2 chr12 64038562 64097618 - antisense NOVEL OTTHUMG00000168754.1 59057 671 3 ENSG00000255817.1 RP11-196H14.4 chr12 64108763 64120489 - antisense NOVEL OTTHUMG00000168755.1 11727 390 2 ENSG00000255629.1 RP11-196H14.3 chr12 64146388 64147857 - antisense NOVEL OTTHUMG00000168756.1 1470 462 2 ENSG00000174206.11 C12orf66 chr12 64186316 64222296 - protein_coding KNOWN OTTHUMG00000168763.3 35981 5999 13 ENSG00000212298.1 RNU6-1009P chr12 64204793 64204899 + snRNA KNOWN NA 107 107 1 ENSG00000243024.5 RPS11P6 chr12 64222337 64397065 + transcribed_processed_pseudogene KNOWN OTTHUMG00000157605.2 174729 2138 13 ENSG00000251788.1 RNU5A-7P chr12 64228560 64228675 - snRNA KNOWN NA 116 116 1 ENSG00000185306.11 C12orf56 chr12 64264762 64391192 - protein_coding KNOWN OTTHUMG00000168782.3 126431 5504 51 ENSG00000256192.1 RP11-290I21.2 chr12 64266413 64266766 + processed_pseudogene KNOWN OTTHUMG00000168781.1 354 354 1 ENSG00000228917.1 RP11-544M22.8 chr1 161084465 161087571 + antisense NOVEL OTTHUMG00000031478.1 3107 1109 3 ENSG00000256293.2 RP11-114F3.2 chr12 64338178 64338797 - processed_pseudogene KNOWN OTTHUMG00000168783.2 620 620 1 ENSG00000238440.1 snoU13 chr12 64355762 64355865 - snoRNA NOVEL NA 104 104 1 ENSG00000184575.10 XPOT chr12 64404350 64451127 + protein_coding KNOWN OTTHUMG00000168794.2 46778 7364 53 ENSG00000255566.1 RP11-114F3.5 chr12 64442510 64443330 - processed_pseudogene KNOWN OTTHUMG00000168809.1 821 504 2 ENSG00000277895.1 RP11-114F3.4 chr12 64451591 64452901 - antisense NOVEL OTTHUMG00000168795.1 1311 1311 1 ENSG00000183735.8 TBK1 chr12 64451880 64502108 + protein_coding KNOWN OTTHUMG00000168796.1 50229 4762 43 ENSG00000256199.1 RP11-439H13.2 chr12 64507166 64533638 - lincRNA NOVEL OTTHUMG00000168810.1 26473 712 3 ENSG00000223294.1 SNORD83 chr12 64575665 64575741 + snoRNA NOVEL NA 77 77 1 ENSG00000256670.1 RP11-338E21.1 chr12 64599078 64609459 - antisense NOVEL OTTHUMG00000168811.1 10382 254 2 ENSG00000153179.10 RASSF3 chr12 64610513 64697567 + protein_coding KNOWN OTTHUMG00000168812.1 87055 3705 17 ENSG00000162755.12 KLHDC9 chr1 161098361 161100346 + protein_coding KNOWN OTTHUMG00000031479.2 1986 1720 28 ENSG00000207546.1 MIR548C chr12 64622509 64622605 + miRNA KNOWN NA 97 97 1 ENSG00000225195.2 RP11-338E21.2 chr12 64628344 64629976 + sense_intronic NOVEL OTTHUMG00000168813.1 1633 281 2 ENSG00000256314.1 RP11-338E21.3 chr12 64654060 64655019 - antisense NOVEL OTTHUMG00000168814.1 960 482 2 ENSG00000280320.1 RP11-629N8.5 chr12 64696191 64696550 - TEC KNOWN OTTHUMG00000187454.1 360 360 1 ENSG00000280181.1 RP11-629N8.4 chr12 64709458 64710513 + TEC KNOWN OTTHUMG00000172918.1 1056 1056 1 ENSG00000135677.9 GNS chr12 64713445 64759447 - protein_coding KNOWN OTTHUMG00000168819.3 46003 6284 88 ENSG00000215159.3 RP11-629N8.3 chr12 64759521 64779318 + antisense NOVEL OTTHUMG00000168823.1 19798 589 3 ENSG00000111490.11 TBC1D30 chr12 64781193 64881032 + protein_coding KNOWN OTTHUMG00000168824.1 99840 8648 45 ENSG00000243020.1 RPL7P39 chr12 64867956 64868699 - processed_pseudogene KNOWN OTTHUMG00000157607.1 744 744 1 ENSG00000255693.1 RP11-766N7.3 chr12 64883394 64977522 + lincRNA NOVEL OTTHUMG00000168829.1 94129 3970 8 ENSG00000143256.4 PFDN2 chr1 161100556 161118111 - protein_coding KNOWN OTTHUMG00000031481.1 17556 677 6 ENSG00000248995.2 RP11-766N7.4 chr12 64920845 64982524 - lincRNA NOVEL OTTHUMG00000168830.1 61680 447 3 ENSG00000221564.1 RNU6ATAC42P chr12 64939023 64939117 + snRNA KNOWN NA 95 95 1 ENSG00000198671.3 RP11-168J19.2 chr12 65017468 65054124 + antisense NOVEL OTTHUMG00000168839.2 36657 1058 3 ENSG00000156076.8 WIF1 chr12 65050626 65121566 - protein_coding KNOWN OTTHUMG00000168832.3 70941 2368 19 ENSG00000207099.1 RNU6-166P chr12 65095749 65095855 + snRNA KNOWN NA 107 107 1 ENSG00000255700.2 APOOP3 chr12 65134688 65135273 + processed_pseudogene KNOWN OTTHUMG00000168865.2 586 586 1 ENSG00000174106.2 LEMD3 chr12 65169571 65248327 + protein_coding KNOWN OTTHUMG00000168840.2 78757 5562 26 ENSG00000276853.1 RP11-305O6.4 chr12 65171262 65171917 + sense_intronic NOVEL OTTHUMG00000187155.1 656 656 1 ENSG00000174099.9 MSRB3 chr12 65278643 65488244 + protein_coding KNOWN OTTHUMG00000168866.1 209602 5791 69 ENSG00000250280.2 RP11-305O6.3 chr12 65281657 65286728 + sense_intronic NOVEL OTTHUMG00000168867.1 5072 3457 2 ENSG00000158793.12 NIT1 chr1 161118086 161125445 + protein_coding KNOWN OTTHUMG00000031473.2 7360 3793 76 ENSG00000215208.3 KRT18P60 chr12 65418731 65420027 - processed_pseudogene KNOWN OTTHUMG00000168871.1 1297 1297 1 ENSG00000250748.5 RP11-230G5.2 chr12 65466820 65642372 - lincRNA NOVEL OTTHUMG00000168872.1 175553 4293 38 ENSG00000255866.1 RP11-221N13.2 chr12 65559591 65560889 + lincRNA NOVEL OTTHUMG00000168876.1 1299 443 2 ENSG00000256268.1 RP11-221N13.3 chr12 65602869 65612997 + lincRNA NOVEL OTTHUMG00000168899.1 10129 895 5 ENSG00000256915.1 RP11-221N13.4 chr12 65644334 65663299 + lincRNA NOVEL OTTHUMG00000168900.1 18966 701 5 ENSG00000213344.2 PCNPP3 chr12 65645992 65646462 - processed_pseudogene KNOWN OTTHUMG00000168873.1 471 471 1 ENSG00000241749.4 RPSAP52 chr12 65758020 65826997 - transcribed_processed_pseudogene KNOWN OTTHUMG00000157608.3 68978 2035 4 ENSG00000149948.12 HMGA2 chr12 65824131 65966295 + protein_coding KNOWN OTTHUMG00000168936.2 142165 15403 47 ENSG00000277945.1 RP11-677M24.1 chr12 65830750 65831050 + sense_intronic NOVEL OTTHUMG00000187156.1 301 301 1 ENSG00000197301.6 RP11-366L20.2 chr12 65851340 65882167 - antisense NOVEL OTTHUMG00000168956.1 30828 6033 12 ENSG00000158796.15 DEDD chr1 161120974 161132688 - protein_coding KNOWN OTTHUMG00000033104.5 11715 2821 68 ENSG00000211577.1 AC090673.1 chr12 65858013 65858132 + miRNA NOVEL NA 120 120 1 ENSG00000256083.1 RP11-366L20.3 chr12 65934777 65948479 - antisense NOVEL OTTHUMG00000168957.1 13703 454 3 ENSG00000276878.1 MIR6074 chr12 66023620 66023726 - miRNA KNOWN NA 107 107 1 ENSG00000256259.1 RP11-366L20.4 chr12 66027725 66031066 - lincRNA NOVEL OTTHUMG00000168958.1 3342 376 3 ENSG00000213343.5 RPL21P18 chr12 66037235 66037714 + processed_pseudogene KNOWN OTTHUMG00000157609.2 480 480 1 ENSG00000251857.1 RNA5SP362 chr12 66066221 66066338 + rRNA KNOWN NA 118 118 1 ENSG00000221807.3 AC078927.1 chr12 66091174 66091257 - miRNA NOVEL NA 84 84 1 ENSG00000139233.5 LLPH chr12 66116555 66130768 - protein_coding KNOWN OTTHUMG00000168959.3 14214 7993 6 ENSG00000228144.2 RP11-745O10.4 chr12 66123917 66169985 - protein_coding NOVEL OTTHUMG00000168972.1 46069 984 8 ENSG00000239335.4 LLPH-AS1 chr12 66130751 66134449 + antisense NOVEL OTTHUMG00000168960.1 3699 623 2 ENSG00000238934.1 ACA64 chr1 161141208 161141336 - snoRNA NOVEL NA 129 129 1 ENSG00000155957.15 TMBIM4 chr12 66135846 66170072 - protein_coding KNOWN OTTHUMG00000168973.2 34227 4137 77 ENSG00000090376.7 IRAK3 chr12 66188879 66254622 + protein_coding KNOWN OTTHUMG00000169002.1 65744 10004 25 ENSG00000225422.4 RBMS1P1 chr12 66234079 66235234 - processed_pseudogene KNOWN OTTHUMG00000169003.2 1156 1156 1 ENSG00000266539.1 AC078889.1 chr12 66235556 66235622 - miRNA NOVEL NA 67 67 1 ENSG00000275058.1 MIR6502 chr12 66251082 66251157 + miRNA KNOWN NA 76 76 1 ENSG00000256072.1 RP11-335I12.2 chr12 66251745 66257434 - antisense NOVEL OTTHUMG00000169004.1 5690 523 4 ENSG00000256777.1 PDCL3P7 chr12 66275940 66276651 - processed_pseudogene KNOWN OTTHUMG00000169005.1 712 712 1 ENSG00000222744.1 RN7SKP166 chr12 66292683 66292987 + misc_RNA KNOWN NA 305 305 1 ENSG00000127311.8 HELB chr12 66302545 66347645 + protein_coding KNOWN OTTHUMG00000169006.2 45101 13796 58 ENSG00000155974.10 GRIP1 chr12 66347431 66804186 - protein_coding KNOWN OTTHUMG00000169019.4 456756 6378 186 ENSG00000143222.10 UFC1 chr1 161152776 161158856 + protein_coding KNOWN OTTHUMG00000033155.1 6081 2274 27 ENSG00000256285.1 OSBPL9P5 chr12 66563524 66563694 + processed_pseudogene KNOWN OTTHUMG00000169031.1 171 171 1 ENSG00000256420.1 OSBPL9P4 chr12 66563967 66569194 - processed_pseudogene KNOWN OTTHUMG00000169032.1 5228 1800 2 ENSG00000256248.1 RP11-123O10.4 chr12 66891876 67069162 - lincRNA NOVEL OTTHUMG00000169048.1 177287 192 2 ENSG00000257083.4 RP11-123O10.3 chr12 67035508 67096406 - lincRNA NOVEL OTTHUMG00000169070.1 60899 1093 13 ENSG00000279310.1 RP11-123O10.1 chr12 67065018 67065278 - TEC KNOWN OTTHUMG00000169049.1 261 261 1 ENSG00000255976.1 RAB11AP2 chr12 67131567 67132205 - processed_pseudogene KNOWN OTTHUMG00000169050.1 639 639 1 ENSG00000237766.2 GGTA2P chr12 67265842 67266966 - processed_pseudogene KNOWN OTTHUMG00000169051.1 1125 1125 1 ENSG00000111530.11 CAND1 chr12 67269281 67319951 + protein_coding KNOWN OTTHUMG00000169060.1 50671 13655 47 ENSG00000256037.1 MRPL40P1 chr12 67351436 67352039 + processed_pseudogene KNOWN OTTHUMG00000169066.1 604 604 1 ENSG00000256355.1 NTAN1P3 chr12 67424272 67424986 - processed_pseudogene KNOWN OTTHUMG00000169067.1 715 715 1 ENSG00000277726.3 TARDBP chr1 11012662 11030528 + protein_coding NOVEL OTTHUMG00000186566.4 17867 2205 24 ENSG00000224985.1 RP11-297K8.2 chr1 161153760 161159349 - antisense NOVEL OTTHUMG00000033156.1 5590 379 2 ENSG00000256172.1 RP11-473M14.3 chr12 67440998 67442559 - lincRNA NOVEL OTTHUMG00000169068.1 1562 741 2 ENSG00000203585.3 RP11-542B15.1 chr12 67519829 67567126 + lincRNA NOVEL OTTHUMG00000169069.1 47298 2284 6 ENSG00000256077.4 RP11-335O4.1 chr12 67571197 67589987 - lincRNA NOVEL OTTHUMG00000169088.2 18791 574 5 ENSG00000127334.10 DYRK2 chr12 67648338 67665406 + protein_coding KNOWN OTTHUMG00000169089.1 17069 9494 14 ENSG00000235872.2 RP11-335O4.3 chr12 67658991 67670919 - antisense NOVEL OTTHUMG00000169090.1 11929 777 3 ENSG00000255970.1 RP11-43N5.1 chr12 67709047 67729475 - lincRNA NOVEL OTTHUMG00000169091.1 20429 3135 5 ENSG00000279505.1 RP11-43N5.2 chr12 67753701 67753817 + TEC KNOWN OTTHUMG00000172893.1 117 117 1 ENSG00000255772.4 LINC01479 chr12 67929235 67970017 + lincRNA NOVEL OTTHUMG00000169106.1 40783 715 6 ENSG00000256835.1 GS1-410F4.5 chr12 67978107 67978387 - processed_pseudogene KNOWN OTTHUMG00000169107.1 281 281 1 ENSG00000255733.4 IFNG-AS1 chr12 67989445 68234686 + antisense NOVEL OTTHUMG00000169108.1 245242 2125 15 ENSG00000143258.14 USP21 chr1 161159450 161165723 + protein_coding KNOWN OTTHUMG00000033154.2 6274 3764 80 ENSG00000244432.2 RPL39P28 chr12 68001394 68001548 - processed_pseudogene KNOWN OTTHUMG00000157610.2 155 155 1 ENSG00000236946.2 HNRNPA1P70 chr12 68035767 68036853 + processed_pseudogene KNOWN OTTHUMG00000169109.1 1087 1087 1 ENSG00000256708.1 RP11-444B24.2 chr12 68143318 68143690 + processed_pseudogene KNOWN OTTHUMG00000169112.1 373 373 1 ENSG00000111537.4 IFNG chr12 68154768 68159747 - protein_coding KNOWN OTTHUMG00000169113.1 4980 1218 4 ENSG00000111536.4 IL26 chr12 68201351 68225821 - protein_coding KNOWN OTTHUMG00000169114.1 24471 1075 5 ENSG00000127318.9 IL22 chr12 68248242 68253607 - protein_coding KNOWN OTTHUMG00000169119.1 5366 1178 11 ENSG00000111554.13 MDM1 chr12 68272443 68332381 - protein_coding KNOWN OTTHUMG00000169136.2 59939 6549 82 ENSG00000251301.5 RP11-81H14.2 chr12 68332888 68451663 - lincRNA NOVEL OTTHUMG00000169139.2 118776 2695 20 ENSG00000256273.1 RP11-71J4.2 chr12 68344664 68349959 + lincRNA NOVEL OTTHUMG00000169138.1 5296 476 2 ENSG00000273824.1 RP11-81H14.1 chr12 68426331 68427737 - lincRNA NOVEL OTTHUMG00000169140.1 1407 1407 1 ENSG00000143224.16 PPOX chr1 161166410 161178013 + protein_coding KNOWN OTTHUMG00000034342.2 11604 4607 110 ENSG00000256075.1 RP11-81H14.3 chr12 68473741 68474902 + processed_pseudogene KNOWN OTTHUMG00000169188.1 1162 1162 1 ENSG00000256917.1 RP11-81H14.4 chr12 68487687 68487863 + processed_pseudogene KNOWN OTTHUMG00000169189.1 177 177 1 ENSG00000240087.3 RP11-254B13.1 chr12 68552995 68553882 - processed_pseudogene KNOWN OTTHUMG00000157612.2 888 888 1 ENSG00000274459.1 Metazoa_SRP chr12 68575858 68576136 - misc_RNA NOVEL NA 279 279 1 ENSG00000127314.16 RAP1B chr12 68610839 68671901 + protein_coding KNOWN OTTHUMG00000133660.5 61063 16942 187 ENSG00000234040.3 RP11-254B13.4 chr12 68626870 68627187 - processed_pseudogene KNOWN OTTHUMG00000169262.2 318 318 1 ENSG00000206650.1 SNORA70G chr12 68627234 68627375 - snoRNA KNOWN NA 142 142 1 ENSG00000234925.2 ATP5HP4 chr12 68642519 68642993 - processed_pseudogene KNOWN OTTHUMG00000169263.1 475 475 1 ENSG00000247363.2 RP11-637A17.2 chr12 68674371 68687755 - lincRNA NOVEL OTTHUMG00000169264.1 13385 2845 8 ENSG00000241825.2 RPL7P42 chr12 68684595 68686308 + processed_pseudogene KNOWN OTTHUMG00000157614.2 1714 679 3 ENSG00000158850.13 B4GALT3 chr1 161171310 161177968 - protein_coding KNOWN OTTHUMG00000034348.1 6659 3890 64 ENSG00000111581.8 NUP107 chr12 68686734 68745809 + protein_coding KNOWN OTTHUMG00000169265.2 59076 8320 150 ENSG00000233560.2 KRT8P39 chr12 68705634 68707066 + processed_pseudogene KNOWN OTTHUMG00000169266.1 1433 1433 1 ENSG00000175782.9 SLC35E3 chr12 68746106 68793964 + protein_coding KNOWN OTTHUMG00000169282.2 47859 19501 14 ENSG00000256678.1 RP11-611O2.2 chr12 68805011 68805479 - processed_pseudogene KNOWN OTTHUMG00000169170.2 469 469 1 ENSG00000135679.20 MDM2 chr12 68808172 68850686 + protein_coding KNOWN OTTHUMG00000142827.9 42515 13273 209 ENSG00000256325.1 RP11-611O2.1 chr12 68828118 68828553 + antisense NOVEL OTTHUMG00000169168.1 436 374 2 ENSG00000257181.1 RP11-611O2.5 chr12 68841288 68843237 - antisense NOVEL OTTHUMG00000169299.1 1950 785 2 ENSG00000256664.1 RP11-611O2.3 chr12 68841946 68842384 + processed_pseudogene KNOWN OTTHUMG00000169171.1 439 439 1 ENSG00000135678.10 CPM chr12 68842197 68971570 - protein_coding KNOWN OTTHUMG00000169300.1 129374 7535 66 ENSG00000252770.1 RNU7-4P chr12 68911921 68911982 + snRNA KNOWN NA 62 62 1 ENSG00000158859.9 ADAMTS4 chr1 161184308 161199056 - protein_coding KNOWN OTTHUMG00000034349.2 14749 10334 13 ENSG00000257289.1 RP11-611O2.6 chr12 68913804 68914022 + processed_pseudogene KNOWN OTTHUMG00000169301.1 219 219 1 ENSG00000280493.1 AC133749.1 chr12 68956406 68956486 - miRNA NOVEL NA 81 81 1 ENSG00000257336.1 PRELID2P1 chr12 68957377 68957677 - processed_pseudogene KNOWN OTTHUMG00000169302.1 301 301 1 ENSG00000258140.1 RP11-324P9.1 chr12 69212123 69224242 + lincRNA NOVEL OTTHUMG00000169339.1 12120 851 4 ENSG00000111605.15 CPSF6 chr12 69239537 69274358 + protein_coding KNOWN OTTHUMG00000169340.1 34822 7190 47 ENSG00000257818.1 RP11-1143G9.2 chr12 69284397 69285485 + processed_pseudogene KNOWN OTTHUMG00000169341.1 1089 1089 1 ENSG00000274979.1 RP11-1143G9.5 chr12 69326574 69331882 - lincRNA NOVEL OTTHUMG00000187272.1 5309 5309 1 ENSG00000090382.5 LYZ chr12 69348341 69354234 + protein_coding KNOWN OTTHUMG00000169342.2 5894 1764 9 ENSG00000257764.2 RP11-1143G9.4 chr12 69353493 69354225 - antisense NOVEL OTTHUMG00000169357.1 733 599 2 ENSG00000127337.5 YEATS4 chr12 69359703 69390796 + protein_coding KNOWN OTTHUMG00000169358.1 31094 1714 28 ENSG00000158864.11 NDUFS2 chr1 161197104 161214395 + protein_coding KNOWN OTTHUMG00000034344.1 17292 3658 101 ENSG00000266185.2 RN7SL804P chr12 69400903 69401200 + misc_RNA KNOWN NA 298 298 1 ENSG00000241765.2 RP11-159A18.1 chr12 69422656 69422995 + processed_pseudogene KNOWN OTTHUMG00000157615.2 340 340 1 ENSG00000257507.1 RP11-956E11.1 chr12 69449470 69460724 + lincRNA NOVEL OTTHUMG00000169359.1 11255 423 3 ENSG00000166225.7 FRS2 chr12 69470349 69579789 + protein_coding KNOWN OTTHUMG00000169373.1 109441 7242 76 ENSG00000264405.1 MIR3913-2 chr12 69584722 69584823 - miRNA KNOWN NA 102 102 1 ENSG00000166226.11 CCT2 chr12 69585334 69601570 + protein_coding KNOWN OTTHUMG00000169383.1 16237 4322 102 ENSG00000198812.4 LRRC10 chr12 69608564 69611162 - protein_coding KNOWN OTTHUMG00000169384.1 2599 2599 1 ENSG00000127325.17 BEST3 chr12 69643360 69699476 - protein_coding KNOWN OTTHUMG00000149919.5 56117 6863 71 ENSG00000279551.1 RP11-588G21.1 chr12 69660034 69661429 - TEC KNOWN OTTHUMG00000169397.1 1396 1396 1 ENSG00000247131.4 RP11-588G21.2 chr12 69713633 69738568 - antisense NOVEL OTTHUMG00000169398.1 24936 2788 7 ENSG00000158869.9 FCER1G chr1 161215234 161220699 + protein_coding KNOWN OTTHUMG00000034343.1 5466 964 14 ENSG00000127328.20 RAB3IP chr12 69738681 69823204 + protein_coding KNOWN OTTHUMG00000169437.1 84524 12612 127 ENSG00000258052.1 AC025263.3 chr12 69801669 69855363 + protein_coding NOVEL OTTHUMG00000141317.3 53695 548 5 ENSG00000166268.9 MYRFL chr12 69825304 69959097 + protein_coding KNOWN OTTHUMG00000169438.2 133794 3524 80 ENSG00000257815.4 RP11-611E13.2 chr12 69904033 70243360 - antisense NOVEL OTTHUMG00000169445.1 339328 1490 12 ENSG00000257241.1 RP11-611E13.3 chr12 69946543 69947081 - antisense NOVEL OTTHUMG00000169446.1 539 434 2 ENSG00000257139.1 RP11-320P7.2 chr12 70180338 70202004 + lincRNA NOVEL OTTHUMG00000169447.1 21667 578 3 ENSG00000257613.1 LINC01481 chr12 70219132 70221862 - lincRNA NOVEL OTTHUMG00000169448.1 2731 629 2 ENSG00000111596.10 CNOT2 chr12 70242994 70354993 + protein_coding KNOWN OTTHUMG00000169481.4 112000 13993 269 ENSG00000279530.1 AC092881.1 chr12 70321677 70324274 - protein_coding KNOWN NA 2598 2598 1 ENSG00000135643.4 KCNMB4 chr12 70366276 70434292 + protein_coding KNOWN OTTHUMG00000167586.1 68017 4874 6 ENSG00000158874.10 APOA2 chr1 161222292 161223631 - protein_coding KNOWN OTTHUMG00000034346.2 1340 945 34 ENSG00000222405.1 RNU4-65P chr12 70443784 70443923 - snRNA KNOWN NA 140 140 1 ENSG00000268721.1 RP11-588H23.5 chr12 70446460 70447585 - processed_pseudogene KNOWN OTTHUMG00000182565.1 1126 1126 1 ENSG00000258168.4 RP11-588H23.3 chr12 70468080 70543040 + antisense NOVEL OTTHUMG00000169498.2 74961 6368 43 ENSG00000127329.13 PTPRB chr12 70515866 70637440 - protein_coding KNOWN OTTHUMG00000169499.2 121575 14542 252 ENSG00000277247.1 RP11-785D18.3 chr12 70570969 70571440 + antisense NOVEL OTTHUMG00000187275.1 472 472 1 ENSG00000153233.11 PTPRR chr12 70638073 70920843 - protein_coding KNOWN OTTHUMG00000169502.1 282771 5142 101 ENSG00000257302.1 FAHD2P1 chr12 70671918 70672856 + processed_pseudogene KNOWN OTTHUMG00000169503.1 939 939 1 ENSG00000207387.1 Y_RNA chr12 70906917 70907018 + misc_RNA NOVEL NA 102 102 1 ENSG00000257265.1 CTD-2021H9.1 chr12 71007773 71032083 - lincRNA NOVEL OTTHUMG00000169539.1 24311 541 4 ENSG00000257454.1 CTD-2021H9.2 chr12 71034122 71104526 - lincRNA NOVEL OTTHUMG00000169540.1 70405 544 5 ENSG00000158882.11 TOMM40L chr1 161225939 161230744 + protein_coding KNOWN OTTHUMG00000034345.1 4806 3289 62 ENSG00000258053.1 CTD-2021H9.3 chr12 71047402 71118247 - lincRNA NOVEL OTTHUMG00000169541.1 70846 565 3 ENSG00000127324.7 TSPAN8 chr12 71125085 71441898 - protein_coding KNOWN OTTHUMG00000169542.2 316814 2519 46 ENSG00000139292.11 LGR5 chr12 71439770 71586310 + protein_coding KNOWN OTTHUMG00000169543.1 146541 5251 79 ENSG00000277223.1 RP11-578B16.1 chr12 71448405 71448850 + sense_intronic NOVEL OTTHUMG00000187279.1 446 446 1 ENSG00000257761.1 RP11-186F10.2 chr12 71582293 71583852 - antisense NOVEL OTTHUMG00000169544.1 1560 527 3 ENSG00000133858.14 ZFC3H1 chr12 71609472 71667725 - protein_coding KNOWN OTTHUMG00000169545.1 58254 9670 96 ENSG00000212461.1 SNORA17 chr12 71639355 71639483 + snoRNA NOVEL NA 129 129 1 ENSG00000173451.5 THAP2 chr12 71663009 71680639 + protein_coding KNOWN OTTHUMG00000169556.1 17631 6527 11 ENSG00000258064.1 RP11-293I14.2 chr12 71674204 71698968 + protein_coding NOVEL OTTHUMG00000169557.2 24765 771 5 ENSG00000139291.12 TMEM19 chr12 71686087 71705046 + protein_coding KNOWN OTTHUMG00000169558.2 18960 6488 29 ENSG00000263548.1 MIR5187 chr1 161227186 161227261 + miRNA KNOWN NA 76 76 1 ENSG00000257515.1 RP11-498M15.1 chr12 71709171 71710374 - lincRNA NOVEL OTTHUMG00000169571.1 1204 577 2 ENSG00000080371.5 RAB21 chr12 71754874 71800285 + protein_coding KNOWN OTTHUMG00000169572.2 45412 16036 16 ENSG00000257410.1 RP11-2H8.2 chr12 71793855 71799627 - lincRNA NOVEL OTTHUMG00000169573.1 5773 1431 2 ENSG00000257991.1 RP11-2H8.3 chr12 71835034 71835396 - processed_pseudogene KNOWN OTTHUMG00000169574.1 363 363 1 ENSG00000121749.14 TBC1D15 chr12 71839707 71927248 + protein_coding KNOWN OTTHUMG00000158553.4 87542 8227 149 ENSG00000257802.1 RP11-2H8.4 chr12 71849228 71850428 - processed_pseudogene KNOWN OTTHUMG00000169641.1 1201 1201 1 ENSG00000139287.11 TPH2 chr12 71938846 72186618 + protein_coding KNOWN OTTHUMG00000169677.2 247773 6929 38 ENSG00000258115.1 RP11-89M22.3 chr12 72046149 72057377 - antisense NOVEL OTTHUMG00000169678.1 11229 819 5 ENSG00000072657.7 TRHDE chr12 72087266 72670757 + protein_coding KNOWN OTTHUMG00000169642.3 583492 11950 51 ENSG00000236333.3 TRHDE-AS1 chr12 72253508 72274907 - processed_transcript NOVEL OTTHUMG00000150370.3 21400 8781 10 ENSG00000009724.15 MASP2 chr1 11026523 11047233 - protein_coding KNOWN OTTHUMG00000002121.1 20711 4251 21 ENSG00000143257.10 NR1I3 chr1 161229666 161238302 - protein_coding KNOWN OTTHUMG00000034347.2 8637 3305 235 ENSG00000257287.1 RP11-98E6.1 chr12 72431722 72432075 - processed_pseudogene KNOWN OTTHUMG00000169679.1 354 354 1 ENSG00000257723.1 CHCHD3P2 chr12 72610678 72611316 + processed_pseudogene KNOWN OTTHUMG00000169680.1 639 639 1 ENSG00000258235.1 RP11-12K6.2 chr12 72727923 72728844 - lincRNA NOVEL OTTHUMG00000169681.1 922 381 2 ENSG00000216084.1 AC131213.1 chr12 72790451 72790645 - miRNA NOVEL NA 195 195 1 ENSG00000258294.4 RP11-314D7.1 chr12 73115957 73143858 - processed_transcript NOVEL OTTHUMG00000169671.1 27902 1091 12 ENSG00000258123.1 RP11-314D7.2 chr12 73159190 73208317 + lincRNA NOVEL OTTHUMG00000169672.1 49128 1256 4 ENSG00000257682.1 RP11-314D7.3 chr12 73203815 73206835 - lincRNA NOVEL OTTHUMG00000169673.1 3021 729 2 ENSG00000243164.1 RP11-166B14.1 chr12 73648666 73649039 + processed_pseudogene KNOWN OTTHUMG00000157618.1 374 374 1 ENSG00000252415.1 RNU6-1012P chr12 73679188 73679296 - snRNA KNOWN NA 109 109 1 ENSG00000257750.1 RP11-295G12.1 chr12 73760689 73798727 + lincRNA NOVEL OTTHUMG00000169687.1 38039 459 5 ENSG00000248485.1 PCP4L1 chr1 161258727 161285450 + protein_coding KNOWN OTTHUMG00000034340.2 26724 1424 3 ENSG00000201809.1 U8 chr12 73764279 73764413 - snoRNA NOVEL NA 135 135 1 ENSG00000276652.1 AC136188.1 chr12 73881987 73882073 + miRNA NOVEL NA 87 87 1 ENSG00000257587.1 RP11-711C17.1 chr12 73906940 73919337 + lincRNA NOVEL OTTHUMG00000169688.1 12398 342 3 ENSG00000264155.1 AC090015.1 chr12 74017775 74017856 - miRNA NOVEL NA 82 82 1 ENSG00000258332.1 RP11-711C17.2 chr12 74039086 74045828 + lincRNA NOVEL OTTHUMG00000169689.1 6743 543 2 ENSG00000251138.5 RP11-81H3.2 chr12 74133166 74402535 - lincRNA NOVEL OTTHUMG00000169693.2 269370 2342 20 ENSG00000258320.1 RP11-274M17.1 chr12 74170445 74171830 + processed_pseudogene KNOWN OTTHUMG00000169690.1 1386 1386 1 ENSG00000257183.1 RP11-274M17.3 chr12 74248637 74283669 - lincRNA NOVEL OTTHUMG00000169794.1 35033 529 4 ENSG00000257113.1 RP11-274M17.2 chr12 74274952 74275231 + processed_pseudogene KNOWN OTTHUMG00000169691.1 280 280 1 ENSG00000257364.1 VENTXP3 chr12 74292324 74293096 + processed_pseudogene KNOWN OTTHUMG00000169694.1 773 773 1 ENSG00000158887.14 MPZ chr1 161304735 161309972 - protein_coding KNOWN OTTHUMG00000034341.3 5238 2154 26 ENSG00000253719.3 ATXN7L3B chr12 74537827 74545430 + protein_coding KNOWN OTTHUMG00000163936.2 7604 7604 1 ENSG00000257386.1 RP11-56G10.2 chr12 74538145 74538633 - antisense NOVEL OTTHUMG00000169696.1 489 375 2 ENSG00000257323.1 RP11-361A23.1 chr12 74656561 74656860 + processed_pseudogene KNOWN OTTHUMG00000169697.1 300 300 1 ENSG00000188646.6 RP11-361A23.2 chr12 74663774 74664141 - processed_pseudogene KNOWN OTTHUMG00000169698.1 368 368 1 ENSG00000257998.1 RP11-361A23.3 chr12 74728038 74728851 - processed_pseudogene KNOWN OTTHUMG00000169699.1 814 814 1 ENSG00000257434.1 RP11-81K13.1 chr12 75020969 75044793 + antisense NOVEL OTTHUMG00000169704.1 23825 3188 8 ENSG00000166006.11 KCNC2 chr12 75040077 75209868 - protein_coding KNOWN OTTHUMG00000169717.2 169792 6368 40 ENSG00000254451.2 RP11-560G2.1 chr12 75234740 75298508 + antisense NOVEL OTTHUMG00000165409.2 63769 2356 9 ENSG00000258112.1 CCNG2P1 chr12 75257635 75258634 - processed_pseudogene KNOWN OTTHUMG00000169731.1 1000 1000 1 ENSG00000180881.18 CAPS2 chr12 75275979 75390928 - protein_coding KNOWN OTTHUMG00000152787.6 114950 6689 126 ENSG00000143252.13 SDHC chr1 161314257 161375340 + protein_coding KNOWN OTTHUMG00000034468.4 61084 14160 42 ENSG00000257823.1 RP11-560G2.2 chr12 75305452 75306357 + processed_pseudogene KNOWN OTTHUMG00000169754.1 906 906 1 ENSG00000273987.1 RP11-585P4.6 chr12 75333798 75334486 - sense_intronic NOVEL OTTHUMG00000187280.1 689 689 1 ENSG00000173401.8 GLIPR1L1 chr12 75334639 75370560 + protein_coding KNOWN OTTHUMG00000169755.2 35922 1384 16 ENSG00000180481.9 GLIPR1L2 chr12 75391070 75432688 + protein_coding KNOWN OTTHUMG00000169756.1 41619 3790 20 ENSG00000139278.8 GLIPR1 chr12 75480680 75503853 + protein_coding KNOWN OTTHUMG00000169757.1 23174 6273 20 ENSG00000257497.2 RP11-585P4.5 chr12 75483454 75489820 - antisense NOVEL OTTHUMG00000169758.2 6367 1482 2 ENSG00000111615.11 KRR1 chr12 75490861 75511636 - protein_coding KNOWN OTTHUMG00000169759.2 20776 10749 41 ENSG00000258077.2 RP11-114H23.1 chr12 75563202 75984015 - lincRNA NOVEL OTTHUMG00000169765.4 420814 1385 8 ENSG00000257777.1 RP11-25J3.2 chr12 75600047 75601551 + processed_pseudogene KNOWN OTTHUMG00000169777.1 1505 1505 1 ENSG00000258245.1 RP11-114H23.3 chr12 75688794 75689096 - processed_pseudogene KNOWN OTTHUMG00000169778.1 303 303 1 ENSG00000188931.3 CFAP126 chr1 161364731 161367874 - protein_coding KNOWN OTTHUMG00000034462.1 3144 774 5 ENSG00000251893.2 SNORA70 chr12 75689152 75689304 - snoRNA NOVEL NA 153 153 1 ENSG00000258088.1 RP11-114H23.2 chr12 75694010 75698816 - lincRNA NOVEL OTTHUMG00000169779.1 4807 742 4 ENSG00000264062.1 AC131012.1 chr12 75724453 75724541 - miRNA NOVEL NA 89 89 1 ENSG00000258091.1 RP11-290L1.6 chr12 75926213 75926467 + processed_pseudogene KNOWN OTTHUMG00000169780.1 255 255 1 ENSG00000243420.3 RN7SL734P chr12 75957833 75958130 - misc_RNA KNOWN NA 298 298 1 ENSG00000257329.1 RP11-290L1.5 chr12 75964440 75967062 + lincRNA NOVEL OTTHUMG00000169781.1 2623 358 3 ENSG00000198923.4 RP11-290L1.7 chr12 75964799 75964995 + processed_pseudogene KNOWN OTTHUMG00000169782.1 197 197 1 ENSG00000139289.12 PHLDA1 chr12 76025447 76033932 - protein_coding KNOWN OTTHUMG00000169783.2 8486 8069 6 ENSG00000257453.1 RP11-290L1.3 chr12 76030494 76031378 + antisense NOVEL OTTHUMG00000169784.1 885 569 2 ENSG00000257839.1 RP11-290L1.2 chr12 76032658 76033897 + antisense NOVEL OTTHUMG00000169785.1 1240 779 2 ENSG00000236484.2 RRM2P2 chr1 161378707 161379358 - processed_pseudogene KNOWN OTTHUMG00000034464.1 652 652 1 ENSG00000187109.12 NAP1L1 chr12 76036587 76085033 - protein_coding KNOWN OTTHUMG00000169786.5 48447 17355 262 ENSG00000257941.1 RP11-290L1.4 chr12 76057538 76058115 + processed_pseudogene KNOWN OTTHUMG00000169787.1 578 578 1 ENSG00000258304.1 RP11-453D16.1 chr12 76115711 76116100 + processed_pseudogene KNOWN OTTHUMG00000169873.1 390 390 1 ENSG00000257872.1 RP11-453D16.2 chr12 76137425 76138610 + processed_pseudogene KNOWN OTTHUMG00000169874.1 1186 1186 1 ENSG00000252858.1 RNU6-1271P chr12 76139567 76139671 + snRNA KNOWN NA 105 105 1 ENSG00000257219.4 RP11-54A9.1 chr12 76259839 76305131 + lincRNA NOVEL OTTHUMG00000169875.1 45293 1201 8 ENSG00000223273.1 RN7SKP172 chr12 76315751 76316048 + misc_RNA KNOWN NA 298 298 1 ENSG00000179941.6 BBS10 chr12 76344474 76348442 - protein_coding KNOWN OTTHUMG00000147352.2 3969 3595 2 ENSG00000091039.15 OSBPL8 chr12 76351797 76559809 - protein_coding KNOWN OTTHUMG00000169876.1 208013 9198 187 ENSG00000257526.2 RP11-20E24.1 chr12 76562294 76615567 + lincRNA NOVEL OTTHUMG00000169877.2 53274 386 3 ENSG00000206921.1 RNU6-481P chr1 161401289 161401395 + snRNA KNOWN NA 107 107 1 ENSG00000213272.5 RP11-613M5.1 chr12 76599671 76600470 + processed_pseudogene KNOWN OTTHUMG00000157621.2 800 800 1 ENSG00000271142.1 YWHAQP7 chr12 76619386 76620043 + processed_pseudogene KNOWN OTTHUMG00000184752.1 658 658 1 ENSG00000243071.1 RP11-613M5.2 chr12 76660405 76660884 + processed_pseudogene KNOWN OTTHUMG00000157622.1 480 480 1 ENSG00000241045.1 RPL7P43 chr12 76721534 76722286 + processed_pseudogene KNOWN OTTHUMG00000157625.1 753 753 1 ENSG00000258090.1 RP11-734E19.1 chr12 76757191 76757914 + processed_pseudogene KNOWN OTTHUMG00000169916.1 724 724 1 ENSG00000186908.13 ZDHHC17 chr12 76763588 76853696 + protein_coding KNOWN OTTHUMG00000169917.1 90109 8800 99 ENSG00000175183.8 CSRP2 chr12 76858715 76879060 - protein_coding KNOWN OTTHUMG00000169919.1 20346 5873 31 ENSG00000257910.1 RP11-461F16.3 chr12 76878193 76880352 + antisense NOVEL OTTHUMG00000169920.1 2160 571 2 ENSG00000257199.2 RP11-669B18.1 chr12 76984079 76984669 - processed_pseudogene KNOWN OTTHUMG00000169968.2 591 591 1 ENSG00000165891.14 E2F7 chr12 77021247 77065580 - protein_coding KNOWN OTTHUMG00000169969.1 44334 6303 53 ENSG00000215840.3 RP11-122G18.7 chr1 161406068 161407082 + processed_pseudogene KNOWN OTTHUMG00000034465.1 1015 884 2 ENSG00000257677.1 RP1-81P11.1 chr12 77219603 77228693 - lincRNA NOVEL OTTHUMG00000169970.1 9091 368 2 ENSG00000278578.1 AC068797.1 chr12 77282752 77282850 - miRNA NOVEL NA 99 99 1 ENSG00000231121.3 RP1-34H18.1 chr12 77324641 77572275 + lincRNA NOVEL OTTHUMG00000169971.2 247635 991 2 ENSG00000257835.1 RP1-97G4.1 chr12 77379820 77390864 + lincRNA NOVEL OTTHUMG00000169975.1 11045 597 3 ENSG00000258066.1 RP11-781A6.1 chr12 77775783 77783576 + lincRNA NOVEL OTTHUMG00000169976.1 7794 376 2 ENSG00000067798.12 NAV3 chr12 77830905 78213008 + protein_coding KNOWN OTTHUMG00000170001.1 382104 11153 163 ENSG00000258225.1 RP11-136F16.1 chr12 78052181 78091737 - antisense NOVEL OTTHUMG00000170002.1 39557 475 4 ENSG00000257220.1 RP11-136F16.2 chr12 78130337 78131004 - processed_pseudogene KNOWN OTTHUMG00000170003.1 668 668 1 ENSG00000258220.1 RP11-38F22.1 chr12 78326680 78359746 - lincRNA NOVEL OTTHUMG00000170004.1 33067 1264 2 ENSG00000258084.4 RP11-754N21.1 chr12 78352519 78483019 + lincRNA NOVEL OTTHUMG00000170009.1 130501 1065 9 ENSG00000277882.1 RP11-122G18.9 chr1 161411597 161411802 - processed_pseudogene KNOWN OTTHUMG00000187542.1 206 206 1 ENSG00000257879.1 RP11-90C1.1 chr12 78426826 78442952 - lincRNA NOVEL OTTHUMG00000170010.1 16127 1010 3 ENSG00000257165.4 RP11-171L9.1 chr12 78448995 78540675 - lincRNA NOVEL OTTHUMG00000170011.1 91681 718 5 ENSG00000257564.1 RP11-123M21.2 chr12 78793526 78794114 - processed_pseudogene KNOWN OTTHUMG00000170012.1 589 589 1 ENSG00000257948.1 RP11-123M21.1 chr12 78804348 78808499 + lincRNA NOVEL OTTHUMG00000170013.1 4152 395 3 ENSG00000067715.12 SYT1 chr12 78863993 79452008 + protein_coding KNOWN OTTHUMG00000134326.3 588016 6494 86 ENSG00000257191.1 RP11-390N6.1 chr12 78960258 79045644 - antisense NOVEL OTTHUMG00000170062.1 85387 716 4 ENSG00000257894.2 RP1-78O14.1 chr12 79341205 79503396 - lincRNA NOVEL OTTHUMG00000170063.2 162192 2253 6 ENSG00000238890.1 AC078917.1 chr12 79348319 79348391 + miRNA NOVEL NA 73 73 1 ENSG00000221788.1 MIR1252 chr12 79419257 79419321 + miRNA KNOWN NA 65 65 1 ENSG00000266390.1 AC027288.2 chr12 79462464 79462550 - miRNA NOVEL NA 87 87 1 ENSG00000143226.12 FCGR2A chr1 161505430 161524013 + protein_coding KNOWN OTTHUMG00000034469.7 18584 5314 57 ENSG00000263757.1 AC027288.1 chr12 79481048 79481140 - miRNA NOVEL NA 93 93 1 ENSG00000257604.1 RP11-359M6.2 chr12 79500119 79500687 - processed_pseudogene KNOWN OTTHUMG00000170064.1 569 243 2 ENSG00000257474.4 RP11-359M6.1 chr12 79540203 79550535 + lincRNA NOVEL OTTHUMG00000170065.1 10333 1394 9 ENSG00000257956.1 NOP56P3 chr12 79558782 79559166 + processed_pseudogene KNOWN OTTHUMG00000170066.1 385 385 1 ENSG00000177425.9 PAWR chr12 79574979 79691097 - protein_coding KNOWN OTTHUMG00000170080.1 116119 11668 36 ENSG00000258048.1 RP11-530C5.1 chr12 79690144 79778451 + lincRNA NOVEL OTTHUMG00000170081.1 88308 354 2 ENSG00000058272.14 PPP1R12A chr12 79773563 79935460 - protein_coding KNOWN OTTHUMG00000170100.2 161898 12490 229 ENSG00000277130.1 RP11-530C5.4 chr12 79818784 79819465 - sense_intronic NOVEL OTTHUMG00000187281.1 682 682 1 ENSG00000258044.1 RP11-530C5.2 chr12 79823778 79825496 + antisense NOVEL OTTHUMG00000170082.1 1719 667 2 ENSG00000201942.1 RNA5SP363 chr12 79878305 79878419 - rRNA KNOWN NA 115 115 1 ENSG00000271895.2 RP4-635E18.8 chr1 11029659 11030528 + antisense NOVEL OTTHUMG00000185649.2 870 870 3 ENSG00000273112.1 RP11-25K21.6 chr1 161513176 161605099 + processed_transcript NOVEL OTTHUMG00000185955.1 91924 553 5 ENSG00000257557.2 RP11-84G21.1 chr12 79934901 79942712 + antisense NOVEL OTTHUMG00000170083.2 7812 3234 3 ENSG00000271496.1 SNRPGP20 chr12 79989014 79989218 - processed_pseudogene KNOWN OTTHUMG00000184774.1 205 205 1 ENSG00000239473.1 RPL7P38 chr12 80028893 80029631 + processed_pseudogene KNOWN OTTHUMG00000157627.1 739 739 1 ENSG00000238842.1 RNU7-106P chr12 80068691 80068757 - snRNA KNOWN NA 67 67 1 ENSG00000230291.5 RP11-244J10.1 chr12 80102899 80103333 - processed_pseudogene KNOWN OTTHUMG00000157628.1 435 435 1 ENSG00000165899.9 OTOGL chr12 80209453 80379090 + protein_coding KNOWN OTTHUMG00000150509.4 169638 8380 167 ENSG00000222880.1 RN7SKP261 chr12 80343515 80343792 - misc_RNA KNOWN NA 278 278 1 ENSG00000139304.11 PTPRQ chr12 80402178 80680234 + protein_coding KNOWN OTTHUMG00000170171.4 278057 12440 147 ENSG00000257786.1 AKIRIN1P1 chr12 80561017 80561560 - processed_pseudogene KNOWN OTTHUMG00000170163.1 544 544 1 ENSG00000257429.1 RP11-272K23.3 chr12 80583683 80593701 - antisense NOVEL OTTHUMG00000170164.1 10019 734 3 ENSG00000173110.7 HSPA6 chr1 161524540 161526910 + protein_coding KNOWN OTTHUMG00000034461.1 2371 2371 1 ENSG00000111046.3 MYF6 chr12 80707498 80709474 + protein_coding KNOWN OTTHUMG00000170165.1 1977 1465 3 ENSG00000111049.3 MYF5 chr12 80716912 80719673 + protein_coding KNOWN OTTHUMG00000170166.1 2762 1542 3 ENSG00000257741.4 LINC01490 chr12 80763154 80770717 + lincRNA NOVEL OTTHUMG00000170167.1 7564 1478 8 ENSG00000111052.6 LIN7A chr12 80792520 80937925 - protein_coding KNOWN OTTHUMG00000170168.1 145406 6795 21 ENSG00000207763.1 MIR617 chr12 80832533 80832629 - miRNA KNOWN NA 97 97 1 ENSG00000258215.1 RP11-299A16.1 chr12 80860955 80861508 - processed_pseudogene KNOWN OTTHUMG00000170169.1 554 554 1 ENSG00000208022.1 MIR618 chr12 80935736 80935833 - miRNA KNOWN NA 98 98 1 ENSG00000111058.6 ACSS3 chr12 80936414 81261205 + protein_coding KNOWN OTTHUMG00000170179.3 324792 14301 58 ENSG00000258026.1 RP11-543H12.1 chr12 81094375 81125845 - antisense NOVEL OTTHUMG00000170180.2 31471 882 5 ENSG00000265227.1 MIR4699 chr12 81158388 81158461 + miRNA KNOWN NA 74 74 1 ENSG00000224203.2 RPS23P10 chr1 161536571 161538158 - unprocessed_pseudogene KNOWN OTTHUMG00000034471.2 1588 486 3 ENSG00000139220.15 PPFIA2 chr12 81257975 81759553 - protein_coding KNOWN OTTHUMG00000170181.4 501579 8573 417 ENSG00000257467.4 RP11-121G22.3 chr12 81270675 81312422 + lincRNA NOVEL OTTHUMG00000170246.1 41748 2024 51 ENSG00000258162.2 RP11-315E17.1 chr12 81378042 81472954 + antisense NOVEL OTTHUMG00000170247.2 94913 2310 7 ENSG00000258375.2 RP11-617J18.1 chr12 81545326 81546450 - processed_pseudogene KNOWN OTTHUMG00000170261.2 1125 1125 1 ENSG00000257609.1 RP11-275O18.1 chr12 81868368 81869046 + processed_pseudogene KNOWN OTTHUMG00000170248.1 679 679 1 ENSG00000257747.1 RP11-362A1.1 chr12 81953719 81993133 + lincRNA NOVEL OTTHUMG00000170249.1 39415 1372 3 ENSG00000258193.1 RP11-362A1.2 chr12 81998632 81998962 + processed_pseudogene KNOWN OTTHUMG00000170250.1 331 331 1 ENSG00000133773.10 CCDC59 chr12 82223681 82358805 - protein_coding KNOWN OTTHUMG00000170251.1 135125 3784 20 ENSG00000221260.2 AC083810.1 chr12 82264943 82265044 + miRNA NOVEL NA 102 102 1 ENSG00000221121.1 AC083811.1 chr12 82342596 82342710 - miRNA NOVEL NA 115 115 1 ENSG00000203747.8 FCGR3A chr1 161541759 161550737 - protein_coding KNOWN OTTHUMG00000034466.6 8979 2883 35 ENSG00000127720.6 METTL25 chr12 82358497 82479236 + protein_coding KNOWN OTTHUMG00000170252.1 120740 3672 57 ENSG00000257875.1 RP11-263K4.1 chr12 82468456 82468948 + processed_pseudogene KNOWN OTTHUMG00000169735.1 493 493 1 ENSG00000258170.1 RP11-263K4.5 chr12 82481118 82497560 - lincRNA NOVEL OTTHUMG00000170253.1 16443 459 3 ENSG00000257837.1 RP11-263K4.4 chr12 82505211 82506188 - lincRNA NOVEL OTTHUMG00000170254.1 978 277 2 ENSG00000257431.1 RP11-263K4.3 chr12 82512677 82515817 + lincRNA NOVEL OTTHUMG00000170255.1 3141 3141 1 ENSG00000179104.7 TMTC2 chr12 82686880 83134870 + protein_coding KNOWN OTTHUMG00000169736.3 447991 8323 50 ENSG00000252220.1 RNU6-977P chr12 83021890 83021992 + snRNA KNOWN NA 103 103 1 ENSG00000213270.5 RPL6P25 chr12 83151331 83152190 + processed_pseudogene KNOWN OTTHUMG00000157640.2 860 860 1 ENSG00000258338.1 RP11-87P13.2 chr12 83171590 83172740 + lincRNA NOVEL OTTHUMG00000169737.1 1151 742 2 ENSG00000257124.2 RP11-384P14.1 chr12 83661009 83661719 - lincRNA NOVEL OTTHUMG00000169738.2 711 569 2 ENSG00000224515.1 RP11-5K23.5 chr1 161556290 161557078 - antisense NOVEL OTTHUMG00000043773.1 789 462 2 ENSG00000221148.1 SNORA3 chr12 84183324 84183448 - snoRNA NOVEL NA 125 125 1 ENSG00000257729.1 RP11-788H18.1 chr12 84271340 84294562 + lincRNA NOVEL OTTHUMG00000169739.1 23223 638 5 ENSG00000258358.2 RP11-228G3.1 chr12 84448625 84449878 - processed_pseudogene KNOWN OTTHUMG00000169740.2 1254 1254 1 ENSG00000257296.1 RP11-701B6.1 chr12 84671598 84672026 + processed_pseudogene KNOWN OTTHUMG00000169741.1 429 429 1 ENSG00000072041.15 SLC6A15 chr12 84859488 84913615 - protein_coding KNOWN OTTHUMG00000169742.5 54128 8781 56 ENSG00000258073.1 RP11-1079J22.1 chr12 84939524 84939668 - processed_pseudogene KNOWN OTTHUMG00000169743.1 145 145 1 ENSG00000231738.9 TSPAN19 chr12 85014311 85036277 - protein_coding KNOWN OTTHUMG00000166181.5 21967 4085 45 ENSG00000133640.17 LRRIQ1 chr12 85036314 85263224 + protein_coding KNOWN OTTHUMG00000166185.4 226911 7560 70 ENSG00000269916.1 RP11-193M21.1 chr12 85263544 85264457 + lincRNA NOVEL OTTHUMG00000184141.1 914 914 1 ENSG00000180318.3 ALX1 chr12 85280107 85301784 + protein_coding KNOWN OTTHUMG00000169820.1 21678 1445 4 ENSG00000072694.17 FCGR2B chr1 161581311 161678654 + protein_coding KNOWN OTTHUMG00000034470.6 97344 6911 55 ENSG00000258815.1 RP11-408B11.2 chr12 85318060 85342912 + lincRNA NOVEL OTTHUMG00000170606.1 24853 519 3 ENSG00000257855.1 RP11-629O19.1 chr12 85567878 85568239 + processed_pseudogene KNOWN OTTHUMG00000169829.3 362 362 1 ENSG00000263449.1 AC021887.1 chr12 85647253 85647320 - miRNA NOVEL NA 68 68 1 ENSG00000258206.1 RP13-619I2.2 chr12 85781892 85782444 - processed_pseudogene KNOWN OTTHUMG00000169830.1 553 553 1 ENSG00000198774.4 RASSF9 chr12 85800697 85836570 - protein_coding KNOWN OTTHUMG00000169831.2 35874 5682 2 ENSG00000133636.9 NTS chr12 85874295 85882992 + protein_coding KNOWN OTTHUMG00000169832.2 8698 1555 9 ENSG00000266016.2 AC016993.1 chr12 85879928 85880014 - miRNA NOVEL NA 87 87 1 ENSG00000182050.12 MGAT4C chr12 85955666 86838904 - protein_coding KNOWN OTTHUMG00000169846.7 883239 27763 63 ENSG00000258178.1 RP11-18J9.3 chr12 85958686 85960946 + lincRNA NOVEL OTTHUMG00000169845.1 2261 1258 2 ENSG00000257897.1 RP11-812D23.1 chr12 86015697 86016441 + processed_pseudogene KNOWN OTTHUMG00000169847.1 745 745 1 ENSG00000244682.6 FCGR2C chr1 161581339 161605662 + polymorphic_pseudogene KNOWN OTTHUMG00000074101.4 24324 3580 63 ENSG00000258185.2 RP11-202H2.1 chr12 86599578 86838998 - lincRNA NOVEL OTTHUMG00000169850.1 239421 450 3 ENSG00000264077.2 AC010196.1 chr12 86745078 86745136 - miRNA NOVEL NA 59 59 1 ENSG00000280049.1 RP11-324H9.1 chr12 87041916 87042423 + TEC KNOWN OTTHUMG00000169851.1 508 508 1 ENSG00000242850.3 RPL23AP68 chr12 87169985 87170429 - processed_pseudogene KNOWN OTTHUMG00000157656.3 445 445 1 ENSG00000258205.1 RP11-248E9.1 chr12 87746567 87746683 + processed_pseudogene KNOWN OTTHUMG00000169862.1 117 117 1 ENSG00000257648.1 CYCSP30 chr12 87750142 87750313 + processed_pseudogene KNOWN OTTHUMG00000169863.1 172 172 1 ENSG00000258173.1 RP11-248E9.4 chr12 87753414 87753447 - processed_pseudogene KNOWN OTTHUMG00000169864.1 34 34 1 ENSG00000258128.2 MKRN9P chr12 87782163 87784568 - transcribed_processed_pseudogene KNOWN OTTHUMG00000169865.2 2406 2406 2 ENSG00000257912.1 RP11-248E9.5 chr12 87795733 87802028 + lincRNA NOVEL OTTHUMG00000169866.1 6296 777 2 ENSG00000257940.1 RP11-248E9.6 chr12 87816486 87817831 + lincRNA NOVEL OTTHUMG00000169867.1 1346 554 3 ENSG00000225217.1 HSPA7 chr1 161606291 161608217 + unprocessed_pseudogene KNOWN OTTHUMG00000074098.2 1927 1927 1 ENSG00000258179.1 RP11-248E9.7 chr12 87820654 87820918 - processed_pseudogene KNOWN OTTHUMG00000169868.1 265 265 1 ENSG00000240721.2 RPS4XP15 chr12 87944885 87950819 + processed_pseudogene KNOWN OTTHUMG00000157662.3 5935 795 2 ENSG00000165805.8 C12orf50 chr12 87980035 88034037 - protein_coding KNOWN OTTHUMG00000169869.3 54003 5609 42 ENSG00000278142.1 AC090060.1 chr12 87981412 87981516 + miRNA NOVEL NA 105 105 1 ENSG00000133641.16 C12orf29 chr12 88033846 88050160 + protein_coding KNOWN OTTHUMG00000169870.3 16315 6454 55 ENSG00000198707.13 CEP290 chr12 88049014 88142216 - protein_coding KNOWN OTTHUMG00000169871.3 93203 10388 210 ENSG00000252747.1 RNA5SP364 chr12 88051701 88051778 + rRNA KNOWN NA 78 78 1 ENSG00000257752.1 RP11-474L23.3 chr12 88057876 88058578 - processed_pseudogene KNOWN OTTHUMG00000169872.1 703 703 1 ENSG00000139324.10 TMTC3 chr12 88142296 88199887 + protein_coding KNOWN OTTHUMG00000169887.2 57592 7327 35 ENSG00000199245.1 Y_RNA chr12 88430442 88430550 + misc_RNA NOVEL NA 109 109 1 ENSG00000231586.2 RPS23P9 chr1 161617992 161619585 - unprocessed_pseudogene KNOWN OTTHUMG00000074097.2 1594 438 3 ENSG00000049130.12 KITLG chr12 88492793 88580851 - protein_coding KNOWN OTTHUMG00000169888.3 88059 6040 41 ENSG00000281333.1 RP11-900F13.3 chr12 88580531 88598218 + antisense NOVEL OTTHUMG00000189589.1 17688 493 3 ENSG00000252850.1 RNU1-117P chr12 88581639 88581796 + snRNA KNOWN NA 158 158 1 ENSG00000278011.1 RP11-900F13.2 chr12 88601862 88602195 + lincRNA NOVEL OTTHUMG00000187165.1 334 334 1 ENSG00000246363.2 RP11-13A1.1 chr12 89010681 89019679 - lincRNA NOVEL OTTHUMG00000169908.2 8999 2941 3 ENSG00000257629.1 RP11-13A1.2 chr12 89027757 89028522 + processed_pseudogene KNOWN OTTHUMG00000169909.1 766 219 2 ENSG00000257156.1 RP11-13A1.3 chr12 89048187 89309553 - lincRNA NOVEL OTTHUMG00000169910.1 261367 599 4 ENSG00000238302.1 RNU7-120P chr12 89282223 89282285 - snRNA KNOWN NA 63 63 1 ENSG00000257820.1 MRPS6P4 chr12 89319364 89319649 + processed_pseudogene KNOWN OTTHUMG00000169911.1 286 286 1 ENSG00000139318.7 DUSP6 chr12 89347232 89353271 - protein_coding KNOWN OTTHUMG00000169912.3 6040 4632 12 ENSG00000162747.8 FCGR3B chr1 161623196 161631963 - protein_coding KNOWN OTTHUMG00000074099.2 8768 3073 38 ENSG00000274021.1 RP11-823E8.3 chr12 89351015 89353271 + lincRNA NOVEL OTTHUMG00000169953.2 2257 2257 1 ENSG00000271327.1 RP11-1109F11.3 chr12 89367807 89369301 + lincRNA NOVEL OTTHUMG00000169943.2 1495 1495 1 ENSG00000271259.1 RP11-1109F11.5 chr12 89371820 89372359 + lincRNA NOVEL OTTHUMG00000184635.1 540 540 1 ENSG00000139323.12 POC1B chr12 89419718 89526024 - protein_coding KNOWN OTTHUMG00000169944.1 106307 8746 94 ENSG00000226982.4 CENPCP1 chr12 89500093 89502670 + processed_pseudogene KNOWN OTTHUMG00000165431.2 2578 2578 1 ENSG00000257594.3 GALNT4 chr12 89519408 89524806 - protein_coding KNOWN OTTHUMG00000166292.3 5399 5399 1 ENSG00000259075.5 POC1B-GALNT4 chr12 89519408 89526262 - protein_coding KNOWN OTTHUMG00000171333.2 6855 5500 6 ENSG00000270344.2 RP11-734K2.4 chr12 89525654 89548005 + antisense NOVEL OTTHUMG00000184636.2 22352 8041 2 ENSG00000279939.1 RP11-734K2.3 chr12 89544203 89544488 - TEC KNOWN OTTHUMG00000172892.1 286 286 1 ENSG00000258302.2 RP11-981P6.1 chr12 89561129 89594878 + antisense NOVEL OTTHUMG00000169945.2 33750 1711 2 ENSG00000116649.8 SRM chr1 11054584 11060024 - protein_coding KNOWN OTTHUMG00000002119.2 5441 1898 23 ENSG00000234211.2 RP11-25K21.1 chr1 161671978 161674824 - antisense NOVEL OTTHUMG00000074100.2 2847 1015 5 ENSG00000070961.13 ATP2B1 chr12 89588049 89709300 - protein_coding KNOWN OTTHUMG00000169946.2 121252 9493 95 ENSG00000266347.2 AC068641.1 chr12 89592833 89592927 + miRNA NOVEL NA 95 95 1 ENSG00000271614.1 LINC00936 chr12 89708959 89712590 + lincRNA NOVEL OTTHUMG00000169947.1 3632 3632 1 ENSG00000252207.1 RNA5SP365 chr12 89726936 89727042 + rRNA KNOWN NA 107 107 1 ENSG00000257480.1 MRPL2P1 chr12 89752913 89753831 + processed_pseudogene KNOWN OTTHUMG00000169948.1 919 919 1 ENSG00000252823.1 RNU6-148P chr12 89754059 89754152 + snRNA KNOWN NA 94 94 1 ENSG00000258216.4 RP11-654D12.2 chr12 89882665 89989289 + lincRNA NOVEL OTTHUMG00000169950.1 106625 682 7 ENSG00000258290.1 RP11-654D12.1 chr12 89919437 89919776 - processed_pseudogene KNOWN OTTHUMG00000169951.1 340 340 1 ENSG00000257725.1 RP11-654D12.3 chr12 89947693 89949726 + lincRNA NOVEL OTTHUMG00000169952.1 2034 400 3 ENSG00000257194.2 RP11-567C2.1 chr12 90107739 90112779 + lincRNA NOVEL OTTHUMG00000170042.3 5041 926 2 ENSG00000213075.7 RPL31P11 chr1 161683695 161685252 - transcribed_processed_pseudogene KNOWN OTTHUMG00000034536.4 1558 1558 2 ENSG00000258183.4 RP11-753N8.1 chr12 90280894 90300340 + lincRNA NOVEL OTTHUMG00000170044.1 19447 1122 10 ENSG00000257995.1 RP11-632B21.1 chr12 90617759 90622822 - lincRNA NOVEL OTTHUMG00000169997.1 5064 310 2 ENSG00000257787.1 RP11-20L19.1 chr12 90809276 90810680 + lincRNA NOVEL OTTHUMG00000170069.2 1405 901 2 ENSG00000197651.4 CCER1 chr12 90905622 90955176 - protein_coding KNOWN OTTHUMG00000170070.2 49555 3244 7 ENSG00000196243.5 LINC00615 chr12 90918023 90948669 + lincRNA NOVEL OTTHUMG00000170071.2 30647 1406 5 ENSG00000083782.6 EPYC chr12 90963679 91005026 - protein_coding KNOWN OTTHUMG00000170072.2 41348 1805 15 ENSG00000139330.5 KERA chr12 91050491 91057983 - protein_coding KNOWN OTTHUMG00000170073.2 7493 2162 3 ENSG00000139329.4 LUM chr12 91102629 91111831 - protein_coding KNOWN OTTHUMG00000170074.2 9203 3008 9 ENSG00000011465.15 DCN chr12 91140484 91183123 - protein_coding KNOWN OTTHUMG00000169998.5 42640 12847 83 ENSG00000258148.2 AC007115.3 chr12 91193709 91193942 + processed_pseudogene KNOWN OTTHUMG00000170075.2 234 234 1 ENSG00000199595.1 Y_RNA chr1 161699506 161699607 + misc_RNA NOVEL NA 102 102 1 ENSG00000258100.1 RP11-121E16.1 chr12 91362196 91368606 + lincRNA NOVEL OTTHUMG00000170076.1 6411 894 2 ENSG00000274647.1 DLEU2_6 chr12 91632912 91633023 - misc_RNA NOVEL NA 112 112 1 ENSG00000277738.1 RP11-693J15.6 chr12 91634887 91635644 + lincRNA NOVEL OTTHUMG00000187288.1 758 758 1 ENSG00000258125.1 RP11-1041F24.1 chr12 91680131 91680873 + lincRNA NOVEL OTTHUMG00000170068.1 743 247 2 ENSG00000258224.1 RP11-587P21.1 chr12 91871122 91871230 - processed_pseudogene KNOWN OTTHUMG00000170088.1 109 109 1 ENSG00000257893.2 RP11-587P21.2 chr12 91877391 91880655 + lincRNA NOVEL OTTHUMG00000170089.2 3265 1188 2 ENSG00000257863.1 RP11-587P21.3 chr12 91901458 91906187 + lincRNA NOVEL OTTHUMG00000170090.1 4730 1011 3 ENSG00000257242.5 C12orf79 chr12 91984976 92142914 - protein_coding KNOWN OTTHUMG00000170091.4 157939 3642 48 ENSG00000279037.1 C12orf79 chr12 91986626 91993403 - protein_coding KNOWN NA 6778 291 4 ENSG00000280112.1 C12orf79 chr12 91986682 91993403 - protein_coding KNOWN NA 6722 258 4 ENSG00000132185.15 FCRLA chr1 161706972 161714352 + protein_coding KNOWN OTTHUMG00000034537.1 7381 3275 55 ENSG00000133639.4 BTG1 chr12 92140278 92145897 - protein_coding KNOWN OTTHUMG00000170092.2 5620 4854 4 ENSG00000245904.3 RP11-796E2.4 chr12 92145573 92189660 + antisense NOVEL OTTHUMG00000170094.2 44088 7589 7 ENSG00000239201.1 RPL21P106 chr12 92168400 92168877 + processed_pseudogene KNOWN OTTHUMG00000157668.1 478 478 1 ENSG00000199895.1 Y_RNA chr12 92170353 92170453 - misc_RNA NOVEL NA 101 101 1 ENSG00000277851.1 RP11-756G20.1 chr12 92247756 92363832 - lincRNA NOVEL OTTHUMG00000187289.1 116077 800 5 ENSG00000205057.4 CLLU1OS chr12 92420094 92428148 - protein_coding KNOWN OTTHUMG00000161990.1 8055 686 4 ENSG00000257127.5 CLLU1 chr12 92421531 92431002 + protein_coding KNOWN OTTHUMG00000170103.2 9472 6810 9 ENSG00000266923.1 RP11-693J15.4 chr12 92421531 92483680 + antisense NOVEL OTTHUMG00000159784.3 62150 1968 2 ENSG00000205056.8 RP11-693J15.5 chr12 92466451 92492091 + lincRNA NOVEL OTTHUMG00000181842.2 25641 10626 2 ENSG00000258262.1 RP11-693J15.3 chr12 92530460 92531324 + processed_pseudogene KNOWN OTTHUMG00000170104.3 865 865 1 ENSG00000162746.13 FCRLB chr1 161721563 161728143 + protein_coding KNOWN OTTHUMG00000133629.1 6581 2592 32 ENSG00000214215.3 C12orf74 chr12 92702843 92708549 + protein_coding KNOWN OTTHUMG00000170105.1 5707 2369 5 ENSG00000187510.6 PLEKHG7 chr12 92721505 92772455 + protein_coding KNOWN OTTHUMG00000170106.2 50951 3998 21 ENSG00000102189.15 EEA1 chr12 92770637 92929331 - protein_coding KNOWN OTTHUMG00000170110.1 158695 10150 60 ENSG00000258012.1 RP11-603K19.1 chr12 92858079 92859273 + processed_pseudogene KNOWN OTTHUMG00000170107.1 1195 1195 1 ENSG00000257195.1 HNRNPA1P50 chr12 92883773 92884700 + processed_pseudogene KNOWN OTTHUMG00000170108.1 928 928 1 ENSG00000202534.1 RNU6-1329P chr12 92952639 92952745 + snRNA KNOWN NA 107 107 1 ENSG00000257345.2 RP11-511B23.1 chr12 92999218 93019820 + lincRNA NOVEL OTTHUMG00000170111.2 20603 1251 6 ENSG00000257322.4 RP11-511B23.2 chr12 93003415 93215679 - antisense NOVEL OTTHUMG00000170112.1 212265 1914 13 ENSG00000207365.1 Y_RNA chr12 93021606 93021712 + misc_RNA NOVEL NA 107 107 1 ENSG00000270506.1 RP11-511B23.4 chr12 93035261 93035744 + processed_pseudogene KNOWN OTTHUMG00000184751.1 484 484 1 ENSG00000241347.3 RN7SL466P chr1 161735808 161736102 + misc_RNA KNOWN NA 295 295 1 ENSG00000256393.1 RPL41P5 chr12 93083598 93083675 - processed_pseudogene KNOWN OTTHUMG00000186889.1 78 78 1 ENSG00000257746.1 RP11-202G11.2 chr12 93090522 93107600 + lincRNA NOVEL OTTHUMG00000170113.1 17079 791 6 ENSG00000221617.1 AC138123.1 chr12 93097251 93097344 + miRNA NOVEL NA 94 94 1 ENSG00000257210.1 NACAP3 chr12 93124063 93124543 - processed_pseudogene KNOWN OTTHUMG00000170114.1 481 481 1 ENSG00000258171.1 RP11-511B23.3 chr12 93174366 93181832 + lincRNA NOVEL OTTHUMG00000170115.1 7467 1269 3 ENSG00000201502.1 SNORD74 chr12 93266017 93266096 + snoRNA NOVEL NA 80 80 1 ENSG00000257512.1 RP11-486A14.1 chr12 93314809 93315941 + transcribed_processed_pseudogene KNOWN OTTHUMG00000170153.1 1133 1133 2 ENSG00000257252.4 RP11-486A14.2 chr12 93317135 93377736 - antisense NOVEL OTTHUMG00000170154.1 60602 865 8 ENSG00000173598.12 NUDT4 chr12 93377883 93408146 + protein_coding KNOWN OTTHUMG00000170155.2 30264 10078 37 ENSG00000177889.8 UBE2N chr12 93405673 93442262 - protein_coding KNOWN OTTHUMG00000170156.3 36590 6269 20 ENSG00000081721.10 DUSP12 chr1 161749758 161757238 + protein_coding KNOWN OTTHUMG00000034540.2 7481 1762 21 ENSG00000200011.1 Y_RNA chr12 93460725 93460826 - misc_RNA NOVEL NA 102 102 1 ENSG00000198015.11 MRPL42 chr12 93467488 93516213 + protein_coding KNOWN OTTHUMG00000170157.3 48726 16393 55 ENSG00000243015.2 RN7SL737P chr12 93509487 93509768 + misc_RNA KNOWN NA 282 282 1 ENSG00000258271.1 RP11-356O22.4 chr12 93529560 93529989 - processed_pseudogene KNOWN OTTHUMG00000170158.1 430 430 1 ENSG00000246985.6 SOCS2-AS1 chr12 93542463 93571768 - processed_transcript NOVEL OTTHUMG00000170159.1 29306 3816 16 ENSG00000120833.12 SOCS2 chr12 93569814 93583487 + protein_coding KNOWN OTTHUMG00000170160.3 13674 6776 31 ENSG00000186076.5 RP11-887P2.3 chr12 93640822 93641586 - processed_pseudogene KNOWN OTTHUMG00000170321.2 765 765 1 ENSG00000169372.11 CRADD chr12 93677375 93894840 + protein_coding KNOWN OTTHUMG00000170322.2 217466 4276 34 ENSG00000258274.1 RP11-887P2.5 chr12 93707791 93737823 - antisense NOVEL OTTHUMG00000170323.1 30033 1949 5 ENSG00000264978.2 RN7SL630P chr12 93831076 93831372 + misc_RNA KNOWN NA 297 297 1 ENSG00000226889.3 RP11-474I16.8 chr1 161765325 161766227 - antisense NOVEL OTTHUMG00000034539.2 903 575 2 ENSG00000258303.1 RP11-887P2.6 chr12 93836167 93838038 + sense_intronic NOVEL OTTHUMG00000170325.1 1872 779 2 ENSG00000257283.1 RP11-1060G2.1 chr12 93894965 93943603 - antisense NOVEL OTTHUMG00000170326.1 48639 540 3 ENSG00000271382.1 RP11-1060G2.2 chr12 93945041 93947813 + lincRNA NOVEL OTTHUMG00000170327.2 2773 2773 1 ENSG00000223126.1 RN7SKP263 chr12 94008739 94009047 - misc_RNA KNOWN NA 309 309 1 ENSG00000257360.1 RP11-74K11.1 chr12 94140077 94141337 + processed_pseudogene KNOWN OTTHUMG00000170234.1 1261 1261 1 ENSG00000136040.7 PLXNC1 chr12 94148723 94307675 + protein_coding KNOWN OTTHUMG00000170235.6 158953 9887 98 ENSG00000258035.1 RP11-74K11.2 chr12 94168006 94186044 - antisense NOVEL OTTHUMG00000170237.1 18039 473 4 ENSG00000258172.1 RP11-1105G2.4 chr12 94272150 94277195 - antisense NOVEL OTTHUMG00000170238.1 5046 493 2 ENSG00000258365.1 RP11-1105G2.3 chr12 94277758 94282844 - antisense NOVEL OTTHUMG00000170239.1 5087 1116 5 ENSG00000173588.13 CEP83 chr12 94306449 94459988 - protein_coding KNOWN OTTHUMG00000170242.4 153540 6925 106 ENSG00000118217.5 ATF6 chr1 161766294 161964070 + protein_coding KNOWN OTTHUMG00000023961.2 197777 7890 21 ENSG00000244391.3 RN7SL330P chr12 94361220 94361526 + misc_RNA KNOWN NA 307 307 1 ENSG00000213250.5 RBMS2P1 chr12 94423744 94424969 - processed_pseudogene KNOWN OTTHUMG00000165432.2 1226 1226 1 ENSG00000278916.1 CEP83-AS1 chr12 94460003 94462484 + TEC KNOWN OTTHUMG00000170256.1 2482 2482 1 ENSG00000257400.1 RP11-778J16.3 chr12 94491546 94496442 - lincRNA NOVEL OTTHUMG00000170227.1 4897 420 2 ENSG00000244091.1 RN7SL483P chr12 94515476 94515760 + misc_RNA KNOWN NA 285 285 1 ENSG00000258357.1 RP11-778J16.2 chr12 94521090 94521869 - processed_pseudogene KNOWN OTTHUMG00000170228.1 780 780 1 ENSG00000236349.1 SUCLG2P2 chr12 94548241 94549536 + processed_pseudogene KNOWN OTTHUMG00000170229.1 1296 1296 1 ENSG00000266099.1 MIR5700 chr12 94561789 94561859 + miRNA KNOWN NA 71 71 1 ENSG00000057704.9 TMCC3 chr12 94567124 94650562 - protein_coding KNOWN OTTHUMG00000170225.1 83439 6515 13 ENSG00000277302.1 MIR7844 chr12 94571231 94571352 - miRNA KNOWN NA 122 122 1 ENSG00000229808.1 RP11-456P18.2 chr1 161890833 161892196 + transcribed_processed_pseudogene KNOWN OTTHUMG00000024019.3 1364 1364 2 ENSG00000257847.1 LSM3P2 chr12 94590821 94591093 + processed_pseudogene KNOWN OTTHUMG00000170226.1 273 273 1 ENSG00000216306.3 KRT19P2 chr12 94834147 94835158 + transcribed_processed_pseudogene KNOWN OTTHUMG00000170700.1 1012 1012 2 ENSG00000208038.1 MIR492 chr12 94834398 94834513 + miRNA KNOWN NA 116 116 1 ENSG00000184752.11 NDUFA12 chr12 94897055 95003770 - protein_coding KNOWN OTTHUMG00000170098.4 106716 1815 33 ENSG00000120798.15 NR2C1 chr12 95020229 95073703 - protein_coding KNOWN OTTHUMG00000170131.2 53475 6529 118 ENSG00000180263.12 FGD6 chr12 95076749 95217482 - protein_coding KNOWN OTTHUMG00000170133.1 140734 10044 93 ENSG00000257121.1 RP11-129B9.2 chr12 95100531 95101045 + processed_pseudogene KNOWN OTTHUMG00000170134.1 515 515 1 ENSG00000237774.3 RP11-129B9.1 chr12 95125760 95126389 + processed_pseudogene KNOWN OTTHUMG00000157672.1 630 630 1 ENSG00000028203.16 VEZT chr12 95217746 95302790 + protein_coding KNOWN OTTHUMG00000170182.2 85045 8757 289 ENSG00000202470.1 Y_RNA chr12 95275770 95275872 + misc_RNA NOVEL NA 103 103 1 ENSG00000171824.12 EXOSC10 chr1 11066618 11099881 - protein_coding KNOWN OTTHUMG00000002123.3 33264 6003 89 ENSG00000162745.9 OLFML2B chr1 161983192 162023854 - protein_coding KNOWN OTTHUMG00000024047.2 40663 3415 22 ENSG00000257666.1 CBX3P5 chr12 95286318 95286838 - processed_pseudogene KNOWN OTTHUMG00000170215.1 521 521 1 ENSG00000212535.1 RNU6-808P chr12 95290692 95290799 + snRNA KNOWN NA 108 108 1 ENSG00000199172.2 MIR331 chr12 95308410 95308520 + miRNA KNOWN NA 111 111 1 ENSG00000265917.1 MIR3685 chr12 95309923 95309984 + miRNA KNOWN NA 62 62 1 ENSG00000258247.1 RP11-167N24.6 chr12 95377208 95380896 - lincRNA NOVEL OTTHUMG00000170257.1 3689 201 2 ENSG00000258313.1 RP11-167N24.5 chr12 95387890 95388558 - lincRNA NOVEL OTTHUMG00000170258.1 669 369 2 ENSG00000257583.1 RP11-167N24.4 chr12 95388599 95405504 - lincRNA NOVEL OTTHUMG00000170259.1 16906 340 2 ENSG00000257943.1 RP11-167N24.3 chr12 95407935 95436828 - processed_transcript NOVEL OTTHUMG00000170260.1 28894 630 7 ENSG00000222544.1 RNU6-735P chr12 95438737 95438843 - snRNA KNOWN NA 107 107 1 ENSG00000241556.1 RP11-490G8.1 chr12 95467397 95467861 - processed_pseudogene KNOWN OTTHUMG00000157673.1 465 465 1 ENSG00000227818.1 RP11-227F8.2 chr1 162039016 162039567 + lincRNA NOVEL OTTHUMG00000024048.1 552 453 2 ENSG00000111142.12 METAP2 chr12 95473520 95515839 + protein_coding KNOWN OTTHUMG00000170280.1 42320 4491 82 ENSG00000136014.10 USP44 chr12 95516560 95551490 - protein_coding KNOWN OTTHUMG00000170281.1 34931 5386 30 ENSG00000257150.2 PGAM1P5 chr12 95551582 95673999 + transcribed_processed_pseudogene KNOWN OTTHUMG00000170282.2 122418 2367 8 ENSG00000212448.1 Y_RNA chr12 95617689 95617786 + misc_RNA NOVEL NA 98 98 1 ENSG00000074527.10 NTN4 chr12 95657807 95791152 - protein_coding KNOWN OTTHUMG00000170290.1 133346 4166 48 ENSG00000199506.1 RNU6-247P chr12 95792529 95792635 - snRNA KNOWN NA 107 107 1 ENSG00000258343.1 RP11-536G4.2 chr12 95795345 95858839 - antisense NOVEL OTTHUMG00000170349.1 63495 924 6 ENSG00000258292.1 RP11-536G4.1 chr12 95803097 95823307 + lincRNA NOVEL OTTHUMG00000170350.1 20211 393 2 ENSG00000139343.9 SNRPF chr12 95858928 95903828 + protein_coding KNOWN OTTHUMG00000170351.1 44901 3043 16 ENSG00000165972.11 CCDC38 chr12 95867048 95942974 - protein_coding KNOWN OTTHUMG00000170352.1 75927 5296 41 ENSG00000198929.11 NOS1AP chr1 162069774 162370475 + protein_coding KNOWN OTTHUMG00000024049.5 300702 7771 38 ENSG00000139344.6 AMDHD1 chr12 95943293 95968716 + protein_coding KNOWN OTTHUMG00000170353.2 25424 2686 23 ENSG00000084110.9 HAL chr12 95972662 95996365 - protein_coding KNOWN OTTHUMG00000170354.1 23704 5146 130 ENSG00000257878.1 RP11-256L6.3 chr12 95996521 96011489 + antisense NOVEL OTTHUMG00000170361.1 14969 862 4 ENSG00000111144.8 LTA4H chr12 96000828 96043520 - protein_coding KNOWN OTTHUMG00000170355.1 42693 7350 117 ENSG00000257715.1 RP11-256L6.2 chr12 96025323 96027971 + antisense NOVEL OTTHUMG00000170356.1 2649 656 2 ENSG00000258251.1 YPEL5P3 chr12 96060024 96060375 - processed_pseudogene KNOWN OTTHUMG00000170362.1 352 352 1 ENSG00000277062.1 Metazoa_SRP chr12 96101951 96102249 - misc_RNA NOVEL NA 299 299 1 ENSG00000111145.6 ELK3 chr12 96194382 96269835 + protein_coding KNOWN OTTHUMG00000170364.1 75454 4648 24 ENSG00000258177.1 RP11-394J1.2 chr12 96222797 96223973 - antisense NOVEL OTTHUMG00000170365.1 1177 525 2 ENSG00000059758.6 CDK17 chr12 96278261 96400560 - protein_coding KNOWN OTTHUMG00000170375.1 122300 6547 85 ENSG00000266144.1 MIR4654 chr1 162157107 162157182 + miRNA KNOWN NA 76 76 1 ENSG00000201435.1 RNU4-24P chr12 96303375 96303513 - snRNA KNOWN NA 139 139 1 ENSG00000257169.1 RP11-117N2.2 chr12 96386818 96387194 - processed_pseudogene KNOWN OTTHUMG00000170376.1 377 377 1 ENSG00000258272.1 RP11-510I5.4 chr12 96422326 96485442 - lincRNA NOVEL OTTHUMG00000170377.1 63117 379 4 ENSG00000252827.1 RN7SKP11 chr12 96427200 96427486 - misc_RNA KNOWN NA 287 287 1 ENSG00000280856.1 AC021052.1 chr12 96443480 96443549 + miRNA NOVEL NA 70 70 1 ENSG00000188596.8 CFAP54 chr12 96489571 96875555 + protein_coding KNOWN OTTHUMG00000167566.6 385985 12719 145 ENSG00000258846.1 EEF1A1P33 chr12 96900697 96902698 - processed_pseudogene KNOWN OTTHUMG00000170603.1 2002 1362 3 ENSG00000139350.10 NEDD1 chr12 96907223 96953777 + protein_coding KNOWN OTTHUMG00000170604.2 46555 4463 118 ENSG00000202368.1 Y_RNA chr12 96979528 96979629 - misc_RNA NOVEL NA 102 102 1 ENSG00000258131.1 RP11-541G9.1 chr12 96985656 97185609 + lincRNA NOVEL OTTHUMG00000170121.1 199954 573 2 ENSG00000227094.1 RP11-565P22.2 chr1 162316852 162317794 - antisense NOVEL OTTHUMG00000031374.1 943 517 2 ENSG00000257470.1 RP11-397H6.1 chr12 97024021 97051129 + lincRNA NOVEL OTTHUMG00000170122.1 27109 271 3 ENSG00000279190.1 RP11-534P6.1 chr12 97150081 97154627 - TEC KNOWN OTTHUMG00000185836.1 4547 4547 1 ENSG00000257920.1 RP11-541G9.2 chr12 97272692 97276209 - lincRNA NOVEL OTTHUMG00000170123.1 3518 576 3 ENSG00000255794.5 RMST chr12 97431653 97565035 + processed_transcript KNOWN OTTHUMG00000170148.1 133383 5166 36 ENSG00000221479.2 MIR1251 chr12 97491900 97491983 + miRNA KNOWN NA 84 84 1 ENSG00000273942.1 RMST_2 chr12 97492462 97492597 + misc_RNA NOVEL NA 136 136 1 ENSG00000274230.1 RMST_3 chr12 97493178 97493286 + misc_RNA NOVEL NA 109 109 1 ENSG00000275231.1 RMST_4 chr12 97493897 97494003 + misc_RNA NOVEL NA 107 107 1 ENSG00000273570.1 RMST_5 chr12 97495932 97496057 + misc_RNA NOVEL NA 126 126 1 ENSG00000275971.1 RMST_6 chr12 97530656 97530858 + misc_RNA NOVEL NA 203 203 1 ENSG00000252262.1 RNA5SP61 chr1 162338643 162338742 + rRNA KNOWN NA 100 100 1 ENSG00000274819.1 RMST_7 chr12 97532691 97532958 + misc_RNA NOVEL NA 268 268 1 ENSG00000251844.1 snoMe28S-Am2634 chr12 97552137 97552228 - snoRNA NOVEL NA 92 92 1 ENSG00000278802.1 RMST_8 chr12 97560557 97560721 + misc_RNA NOVEL NA 165 165 1 ENSG00000276398.1 RMST_9 chr12 97560856 97561048 + misc_RNA NOVEL NA 193 193 1 ENSG00000279798.1 RP11-528M18.2 chr12 97563257 97563971 - TEC KNOWN OTTHUMG00000170149.1 715 715 1 ENSG00000207586.1 MIR135A2 chr12 97563812 97563911 + miRNA KNOWN NA 100 100 1 ENSG00000277081.1 RMST_10 chr12 97564174 97564327 + misc_RNA NOVEL NA 154 154 1 ENSG00000257157.1 RP11-528M18.3 chr12 97679879 97680047 - processed_pseudogene KNOWN OTTHUMG00000170150.1 169 169 1 ENSG00000257501.5 RP11-1016B18.1 chr12 97713412 97761859 - transcribed_processed_pseudogene KNOWN OTTHUMG00000170151.3 48448 5252 16 ENSG00000206899.1 RNU6-36P chr12 97721716 97721822 + snRNA KNOWN NA 107 107 1 ENSG00000207729.2 MIR556 chr1 162342530 162342638 + miRNA KNOWN NA 109 109 1 ENSG00000265861.1 MIR4495 chr12 97939056 97939121 - miRNA KNOWN NA 66 66 1 ENSG00000263890.1 MIR4303 chr12 97995383 97995448 - miRNA KNOWN NA 66 66 1 ENSG00000258312.1 RP11-690J15.1 chr12 98113014 98292445 - lincRNA NOVEL OTTHUMG00000170161.1 179432 521 5 ENSG00000257580.1 RP11-718L23.1 chr12 98317741 98318349 + processed_pseudogene KNOWN OTTHUMG00000170162.2 609 609 1 ENSG00000201296.1 RNU4-41P chr12 98417896 98418038 - snRNA KNOWN NA 143 143 1 ENSG00000227825.4 SLC9A7P1 chr12 98453835 98457145 - transcribed_processed_pseudogene KNOWN OTTHUMG00000170629.1 3311 3311 2 ENSG00000245017.2 RP11-181C3.1 chr12 98485544 98503855 - lincRNA NOVEL OTTHUMG00000170208.2 18312 1918 6 ENSG00000257167.2 TMPO-AS1 chr12 98512973 98516422 - antisense NOVEL OTTHUMG00000170209.3 3450 3357 5 ENSG00000120802.12 TMPO chr12 98515512 98550379 + protein_coding KNOWN OTTHUMG00000170210.3 34868 8593 61 ENSG00000225185.3 RP11-481K9.4 chr12 98590723 98591214 - processed_pseudogene KNOWN OTTHUMG00000170630.1 492 492 1 ENSG00000254706.2 RP11-565P22.6 chr1 162365407 162383531 + protein_coding NOVEL OTTHUMG00000165223.2 18125 1146 6 ENSG00000075415.11 SLC25A3 chr12 98593591 98606379 + protein_coding KNOWN OTTHUMG00000170212.2 12789 8896 90 ENSG00000212443.1 SNORA53 chr12 98599635 98599883 + snoRNA KNOWN NA 249 249 1 ENSG00000166130.13 IKBIP chr12 98613405 98645113 - protein_coding KNOWN OTTHUMG00000170213.2 31709 4163 8 ENSG00000120868.12 APAF1 chr12 98645141 98735433 + protein_coding KNOWN OTTHUMG00000170214.3 90293 7908 187 ENSG00000185046.17 ANKS1B chr12 98726457 99984654 - protein_coding KNOWN OTTHUMG00000170308.6 1258198 11053 258 ENSG00000258204.1 RP11-90E9.1 chr12 98794485 98794964 + processed_pseudogene KNOWN OTTHUMG00000170241.1 480 480 1 ENSG00000257458.1 RP11-473C19.1 chr12 98931682 98976656 + antisense NOVEL OTTHUMG00000170309.1 44975 512 4 ENSG00000202324.1 RNA5SP366 chr12 99083783 99083905 - rRNA KNOWN NA 123 123 1 ENSG00000258039.2 RP11-406H4.1 chr12 99093359 99105011 + antisense NOVEL OTTHUMG00000170310.2 11653 1038 5 ENSG00000180219.1 FAM71C chr12 99647753 99650046 + protein_coding KNOWN OTTHUMG00000170311.1 2294 1796 2 ENSG00000239887.4 C1orf226 chr1 162366908 162386818 + protein_coding KNOWN OTTHUMG00000031376.3 19911 4495 9 ENSG00000277393.1 AC078916.1 chr12 99884046 99884146 + miRNA NOVEL NA 101 101 1 ENSG00000214203.4 RPS4XP1 chr12 100009052 100009838 - processed_pseudogene KNOWN OTTHUMG00000157676.1 787 787 1 ENSG00000279148.1 RP11-135F9.4 chr12 100026248 100027540 - TEC KNOWN OTTHUMG00000170194.1 1293 1293 1 ENSG00000111647.11 UHRF1BP1L chr12 100028455 100142848 - protein_coding KNOWN OTTHUMG00000170195.2 114394 6616 79 ENSG00000280088.1 RP11-135F9.3 chr12 100032325 100034074 - TEC KNOWN OTTHUMG00000170196.1 1750 1750 1 ENSG00000257696.1 RP11-175P13.2 chr12 100143058 100144671 + antisense NOVEL OTTHUMG00000170243.1 1614 418 2 ENSG00000238105.6 GOLGA2P5 chr12 100156357 100173659 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000167822.2 17303 10957 56 ENSG00000221770.1 AC010203.1 chr12 100157256 100157338 - miRNA NOVEL NA 83 83 1 ENSG00000266610.2 RN7SL176P chr12 100158502 100158765 - misc_RNA KNOWN NA 264 264 1 ENSG00000257489.5 RP11-175P13.3 chr12 100173196 100199783 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000170244.2 26588 1405 16 ENSG00000171722.10 C1orf111 chr1 162373203 162376870 - protein_coding KNOWN OTTHUMG00000031375.2 3668 1864 9 ENSG00000075089.8 ACTR6 chr12 100199122 100241865 + protein_coding KNOWN OTTHUMG00000170245.2 42744 3813 99 ENSG00000166153.15 DEPDC4 chr12 100203669 100267079 - protein_coding KNOWN OTTHUMG00000170318.1 63411 3118 52 ENSG00000206790.1 Y_RNA chr12 100257688 100257790 - misc_RNA NOVEL NA 103 103 1 ENSG00000136021.16 SCYL2 chr12 100267140 100341724 + protein_coding KNOWN OTTHUMG00000170319.3 74585 7470 65 ENSG00000179520.9 SLC17A8 chr12 100357079 100422059 + protein_coding KNOWN OTTHUMG00000170358.2 64981 4272 29 ENSG00000012504.12 NR1H4 chr12 100473708 100564413 + protein_coding KNOWN OTTHUMG00000170359.4 90706 3460 70 ENSG00000271177.1 RP11-575G13.3 chr12 100525186 100525420 - processed_pseudogene KNOWN OTTHUMG00000184773.1 235 235 1 ENSG00000139354.9 GAS2L3 chr12 100573683 100628286 + protein_coding KNOWN OTTHUMG00000170439.2 54604 6799 52 ENSG00000257803.2 RP11-575G13.2 chr12 100578744 100580197 + processed_pseudogene KNOWN OTTHUMG00000170440.2 1454 1454 1 ENSG00000239036.1 AC010209.1 chr12 100655722 100655804 - miRNA NOVEL NA 83 83 1 ENSG00000239664.2 RP5-857K21.3 chr1 594453 597498 - lincRNA NOVEL OTTHUMG00000002330.2 3046 639 4 ENSG00000226849.1 RP4-635E18.7 chr1 11068471 11073097 + antisense NOVEL OTTHUMG00000034707.1 4627 2682 2 ENSG00000198574.5 SH2D1B chr1 162395266 162412138 - protein_coding KNOWN OTTHUMG00000031377.1 16873 2797 6 ENSG00000151572.15 ANO4 chr12 100717526 101128641 + protein_coding KNOWN OTTHUMG00000170465.4 411116 4997 98 ENSG00000257325.1 RP11-263E1.1 chr12 100852331 100859262 - antisense NOVEL OTTHUMG00000170497.1 6932 386 2 ENSG00000258007.1 RP11-350G24.1 chr12 101038420 101039094 - antisense NOVEL OTTHUMG00000170473.1 675 557 2 ENSG00000258033.1 RP11-350G24.2 chr12 101066734 101069232 + unprocessed_pseudogene KNOWN OTTHUMG00000170498.1 2499 1256 2 ENSG00000256870.2 SLC5A8 chr12 101155493 101210407 - protein_coding KNOWN OTTHUMG00000170499.1 54915 4178 15 ENSG00000207414.1 RNU6-768P chr12 101199271 101199377 - snRNA KNOWN NA 107 107 1 ENSG00000241744.1 RP11-399D15.1 chr12 101228141 101228876 - processed_pseudogene KNOWN OTTHUMG00000157681.1 736 736 1 ENSG00000120800.4 UTP20 chr12 101280109 101386616 + protein_coding KNOWN OTTHUMG00000170270.1 106508 10024 74 ENSG00000120805.12 ARL1 chr12 101393120 101407820 - protein_coding KNOWN OTTHUMG00000170271.1 14701 4979 51 ENSG00000257543.1 RP11-321F8.4 chr12 101408372 101409060 - lincRNA NOVEL OTTHUMG00000170272.1 689 379 2 ENSG00000227243.3 SLAMF6P1 chr1 162445549 162446566 + unprocessed_pseudogene KNOWN OTTHUMG00000031372.2 1018 602 2 ENSG00000222890.1 RNU6-1068P chr12 101411357 101411459 + snRNA KNOWN NA 103 103 1 ENSG00000239413.1 RPS27P23 chr12 101424441 101424691 + processed_pseudogene KNOWN OTTHUMG00000157689.1 251 251 1 ENSG00000206929.1 Y_RNA chr12 101446825 101446932 + misc_RNA NOVEL NA 108 108 1 ENSG00000202249.1 RNU5E-5P chr12 101466705 101466820 + snRNA KNOWN NA 116 116 1 ENSG00000252366.1 RNA5SP367 chr12 101472339 101472456 + rRNA KNOWN NA 118 118 1 ENSG00000166211.7 SPIC chr12 101475421 101486997 + protein_coding KNOWN OTTHUMG00000170273.1 11577 1132 6 ENSG00000196091.11 MYBPC1 chr12 101568353 101686018 + protein_coding KNOWN OTTHUMG00000170274.3 117666 7385 470 ENSG00000257514.4 RP11-755O11.2 chr12 101646720 101659970 - antisense NOVEL OTTHUMG00000170387.1 13251 699 4 ENSG00000274560.1 RP11-285E23.2 chr12 101696002 101696450 - lincRNA NOVEL OTTHUMG00000187215.1 449 449 1 ENSG00000111666.9 CHPT1 chr12 101696947 101744140 + protein_coding KNOWN OTTHUMG00000170443.2 47194 6004 64 ENSG00000152332.14 UHMK1 chr1 162497251 162529629 + protein_coding KNOWN OTTHUMG00000031373.1 32379 9246 30 ENSG00000199933.1 RNY1P16 chr12 101719808 101719918 + misc_RNA KNOWN NA 111 111 1 ENSG00000139351.13 SYCP3 chr12 101728648 101739472 - protein_coding KNOWN OTTHUMG00000150132.2 10825 3829 35 ENSG00000111670.13 GNPTAB chr12 101745497 101830938 - protein_coding KNOWN OTTHUMG00000170444.1 85442 9620 57 ENSG00000222255.1 RNU6-101P chr12 101765406 101765509 - snRNA KNOWN NA 104 104 1 ENSG00000258230.2 RP11-511H9.3 chr12 101773114 101773755 - transcribed_processed_pseudogene KNOWN OTTHUMG00000170445.2 642 642 2 ENSG00000201168.1 RNA5SP368 chr12 101779814 101779929 + rRNA KNOWN NA 116 116 1 ENSG00000222932.1 RNU6-172P chr12 101796410 101796502 - snRNA KNOWN NA 93 93 1 ENSG00000223046.1 RNA5SP369 chr12 101836820 101836927 + rRNA KNOWN NA 108 108 1 ENSG00000252863.1 RNU6-1183P chr12 101871742 101871801 - snRNA KNOWN NA 60 60 1 ENSG00000258153.1 HSPE1P4 chr12 101873316 101873623 - processed_pseudogene KNOWN OTTHUMG00000170446.1 308 308 1 ENSG00000227941.1 UQCRBP2 chr1 162541332 162541628 - processed_pseudogene KNOWN OTTHUMG00000034418.1 297 297 1 ENSG00000136048.12 DRAM1 chr12 101877351 102012130 + protein_coding KNOWN OTTHUMG00000170447.2 134780 4180 29 ENSG00000257202.1 RP11-512N21.3 chr12 101923410 101924719 - antisense NOVEL OTTHUMG00000170448.1 1310 564 3 ENSG00000241917.1 RP11-512N21.1 chr12 101936216 101936674 + processed_pseudogene KNOWN OTTHUMG00000157691.1 459 459 1 ENSG00000258308.4 RP11-554E23.2 chr12 101954998 101962390 - lincRNA NOVEL OTTHUMG00000170475.1 7393 1316 5 ENSG00000258288.1 NENFP2 chr12 101963901 101964340 + processed_pseudogene KNOWN OTTHUMG00000170476.1 440 440 1 ENSG00000120860.9 CCDC53 chr12 102012927 102062149 - protein_coding KNOWN OTTHUMG00000168187.1 49223 2593 80 ENSG00000257222.1 RP11-554E23.4 chr12 102063355 102074820 + antisense NOVEL OTTHUMG00000170477.1 11466 374 3 ENSG00000075188.7 NUP37 chr12 102073103 102120124 - protein_coding KNOWN OTTHUMG00000170478.3 47022 3492 56 ENSG00000281370.1 AC079907.1 chr12 102075068 102075229 + protein_coding NOVEL NA 162 63 2 ENSG00000185480.10 PARPBP chr12 102120185 102197520 + protein_coding KNOWN OTTHUMG00000167923.3 77336 4745 78 ENSG00000259788.1 RP11-359K18.3 chr1 162560227 162561308 - antisense NOVEL OTTHUMG00000176119.1 1082 1082 1 ENSG00000183395.4 PMCH chr12 102196459 102197845 - protein_coding KNOWN OTTHUMG00000170479.1 1387 766 3 ENSG00000281344.1 HELLPAR chr12 102197585 102402596 + macro_lncRNA KNOWN OTTHUMG00000189570.1 205012 205012 1 ENSG00000264554.2 RN7SL793P chr12 102217318 102217613 - misc_RNA KNOWN NA 296 296 1 ENSG00000258142.2 RP11-18O15.1 chr12 102230027 102230533 - processed_pseudogene KNOWN OTTHUMG00000170480.2 507 507 1 ENSG00000017427.14 IGF1 chr12 102395867 102480645 - protein_coding KNOWN OTTHUMG00000149910.1 84779 8087 30 ENSG00000257254.1 RP11-210L7.1 chr12 102513251 102513655 - processed_pseudogene KNOWN OTTHUMG00000170481.1 405 405 1 ENSG00000258169.1 LINC00485 chr12 102809280 102824399 - lincRNA NOVEL OTTHUMG00000169965.1 15120 3722 5 ENSG00000171759.7 PAH chr12 102836885 102958410 - protein_coding KNOWN OTTHUMG00000169966.1 121526 7173 82 ENSG00000139352.3 ASCL1 chr12 102957686 102960516 + protein_coding KNOWN OTTHUMG00000169967.1 2831 2472 2 ENSG00000257703.4 RP11-328J6.1 chr12 103080950 103178675 - lincRNA NOVEL OTTHUMG00000170036.1 97726 825 6 ENSG00000117143.12 UAP1 chr1 162561506 162599842 + protein_coding KNOWN OTTHUMG00000034419.4 38337 3437 47 ENSG00000257860.4 RP11-552I14.1 chr12 103151842 103168309 + lincRNA NOVEL OTTHUMG00000170037.2 16468 1253 18 ENSG00000179088.13 C12orf42 chr12 103237591 103496010 - protein_coding KNOWN OTTHUMG00000169988.3 258420 4898 96 ENSG00000238909.1 AC068643.1 chr12 103238398 103238475 - miRNA NOVEL NA 78 78 1 ENSG00000257415.1 RP11-626I20.1 chr12 103503381 103504936 + processed_pseudogene KNOWN OTTHUMG00000170053.1 1556 1556 1 ENSG00000257994.1 RP11-626I20.2 chr12 103505411 103506174 - unprocessed_pseudogene KNOWN OTTHUMG00000170054.1 764 395 2 ENSG00000257762.4 RP11-626I20.3 chr12 103547794 103559815 + lincRNA NOVEL OTTHUMG00000170055.1 12022 3149 9 ENSG00000136011.13 STAB2 chr12 103587273 103766727 + protein_coding KNOWN OTTHUMG00000170056.1 179455 9288 83 ENSG00000212594.1 U8 chr12 103592112 103592243 + snoRNA NOVEL NA 132 132 1 ENSG00000257737.1 RP11-341G23.2 chr12 103654780 103657995 - antisense NOVEL OTTHUMG00000170057.1 3216 478 2 ENSG00000257766.1 RP11-341G23.3 chr12 103668575 103669406 - antisense NOVEL OTTHUMG00000170058.1 832 468 2 ENSG00000272574.1 RP11-359K18.4 chr1 162593103 162593754 + sense_intronic NOVEL OTTHUMG00000185962.1 652 505 2 ENSG00000257681.1 RP11-341G23.4 chr12 103746315 103768858 - antisense NOVEL OTTHUMG00000170059.1 22544 1063 5 ENSG00000111696.10 NT5DC3 chr12 103770453 103841197 - protein_coding KNOWN OTTHUMG00000157017.2 70745 8722 32 ENSG00000257754.1 RP11-650K20.2 chr12 103819610 103822085 + antisense NOVEL OTTHUMG00000170060.1 2476 413 3 ENSG00000257327.1 RP11-650K20.3 chr12 103841451 103844664 + lincRNA NOVEL OTTHUMG00000170096.1 3214 674 2 ENSG00000214198.6 RP11-642P15.1 chr12 103843749 103930211 - unitary_pseudogene KNOWN OTTHUMG00000170097.1 86463 6339 37 ENSG00000166598.11 HSP90B1 chr12 103930107 103953645 + protein_coding KNOWN OTTHUMG00000170118.1 23539 4688 71 ENSG00000265072.1 MIR3652 chr12 103930425 103930555 + miRNA KNOWN NA 131 131 1 ENSG00000204954.8 C12orf73 chr12 103950202 103965708 - protein_coding KNOWN OTTHUMG00000170119.1 15507 3096 36 ENSG00000139372.13 TDG chr12 103965804 103988874 + protein_coding KNOWN OTTHUMG00000168418.2 23071 4903 63 ENSG00000215976.1 AC078819.1 chr12 103985111 103985204 + miRNA NOVEL NA 94 94 1 ENSG00000162733.15 DDR2 chr1 162631373 162787400 + protein_coding KNOWN OTTHUMG00000034423.4 156028 10730 53 ENSG00000120820.11 GLT8D2 chr12 103988984 104064183 - protein_coding KNOWN OTTHUMG00000170120.1 75200 3271 49 ENSG00000216285.5 RP11-490H24.5 chr12 104030779 104031543 + processed_pseudogene KNOWN OTTHUMG00000170174.1 765 765 1 ENSG00000111727.10 HCFC2 chr12 104064457 104106524 + protein_coding KNOWN OTTHUMG00000170175.2 42068 6773 47 ENSG00000120837.6 NFYB chr12 104117077 104138289 - protein_coding KNOWN OTTHUMG00000170176.1 21213 4956 29 ENSG00000199415.1 RNA5SP370 chr12 104125236 104125356 + rRNA KNOWN NA 121 121 1 ENSG00000280646.1 AC089983.1 chr12 104125268 104125329 + miRNA NOVEL NA 62 62 1 ENSG00000257193.1 RP11-818F20.4 chr12 104170395 104177659 + lincRNA NOVEL OTTHUMG00000170177.1 7265 428 3 ENSG00000198431.14 TXNRD1 chr12 104215779 104350305 + protein_coding KNOWN OTTHUMG00000166481.3 134527 6708 242 ENSG00000257732.1 RP11-818F20.5 chr12 104262314 104280722 - antisense NOVEL OTTHUMG00000170178.1 18409 701 2 ENSG00000213442.5 RPL18AP3 chr12 104265309 104265836 + processed_pseudogene KNOWN OTTHUMG00000157701.1 528 528 1 ENSG00000243173.3 RN7SL861P chr1 162777730 162778014 + misc_RNA KNOWN NA 285 285 1 ENSG00000255150.1 EID3 chr12 104303739 104305202 + protein_coding KNOWN OTTHUMG00000165912.1 1464 1464 1 ENSG00000171310.9 CHST11 chr12 104455295 104762014 + protein_coding KNOWN OTTHUMG00000169803.2 306720 6492 15 ENSG00000258111.1 RP11-43D4.2 chr12 104514029 104514439 + processed_pseudogene KNOWN OTTHUMG00000169817.2 411 411 1 ENSG00000279176.1 RP11-43D4.3 chr12 104552073 104553447 + TEC KNOWN OTTHUMG00000169818.1 1375 1375 1 ENSG00000264295.1 MIR3922 chr12 104591633 104591716 + miRNA KNOWN NA 84 84 1 ENSG00000136052.8 SLC41A2 chr12 104802553 104958744 - protein_coding KNOWN OTTHUMG00000156965.3 156192 5151 32 ENSG00000222579.1 Y_RNA chr12 104851824 104851918 + misc_RNA NOVEL NA 95 95 1 ENSG00000265054.1 AC090051.1 chr12 104951760 104951846 + miRNA NOVEL NA 87 87 1 ENSG00000257758.1 KRT18P20 chr12 104976749 104978027 - processed_pseudogene KNOWN OTTHUMG00000169821.1 1279 1279 1 ENSG00000151131.8 C12orf45 chr12 104986310 105049737 + protein_coding KNOWN OTTHUMG00000169822.2 63428 1424 15 ENSG00000132196.12 HSD17B7 chr1 162790702 162812817 + protein_coding KNOWN OTTHUMG00000034420.6 22116 4124 49 ENSG00000136010.12 ALDH1L2 chr12 105019784 105084577 - protein_coding KNOWN OTTHUMG00000169823.2 64794 8507 70 ENSG00000257886.1 RP11-61E11.1 chr12 105072486 105074021 + antisense NOVEL OTTHUMG00000169824.1 1536 289 2 ENSG00000257999.1 RP11-61E11.2 chr12 105102472 105107179 - antisense NOVEL OTTHUMG00000169828.1 4708 641 2 ENSG00000136051.12 KIAA1033 chr12 105107324 105169134 + protein_coding NOVEL OTTHUMG00000169838.10 61811 7698 167 ENSG00000136044.10 APPL2 chr12 105173296 105236238 - protein_coding KNOWN OTTHUMG00000169853.3 62943 5124 154 ENSG00000235162.7 C12orf75 chr12 105235290 105396097 + protein_coding KNOWN OTTHUMG00000150129.7 160808 2693 39 ENSG00000257642.1 RP11-474B16.1 chr12 105304867 105327017 - antisense NOVEL OTTHUMG00000169859.1 22151 549 3 ENSG00000264749.1 AC011313.1 chr12 105327906 105327992 - miRNA NOVEL NA 87 87 1 ENSG00000257859.1 CASC18 chr12 105704203 105744062 + lincRNA NOVEL OTTHUMG00000169725.1 39860 2586 5 ENSG00000257773.1 ST13P3 chr12 106015897 106017006 + processed_pseudogene KNOWN OTTHUMG00000169726.1 1110 1110 1 ENSG00000281350.1 Metazoa_SRP chr1 11070091 11070353 + misc_RNA NOVEL NA 263 263 1 ENSG00000185860.12 C1orf110 chr1 162824458 162868815 - protein_coding KNOWN OTTHUMG00000034421.3 44358 4316 16 ENSG00000257890.1 RP11-114F10.2 chr12 106050961 106058254 - lincRNA NOVEL OTTHUMG00000169728.1 7294 632 4 ENSG00000074590.12 NUAK1 chr12 106063340 106140033 - protein_coding KNOWN OTTHUMG00000169763.2 76694 7008 18 ENSG00000257438.1 RP11-114F10.3 chr12 106103163 106106165 + antisense NOVEL OTTHUMG00000169764.1 3003 753 3 ENSG00000257611.1 RP11-185N2.1 chr12 106170004 106172437 + processed_pseudogene KNOWN OTTHUMG00000169727.1 2434 2434 1 ENSG00000136026.12 CKAP4 chr12 106237877 106304279 - protein_coding KNOWN OTTHUMG00000170085.1 66403 3638 9 ENSG00000258355.1 RP11-651L5.2 chr12 106245613 106246956 - sense_intronic NOVEL OTTHUMG00000170086.1 1344 312 2 ENSG00000277715.1 RP11-651L5.3 chr12 106250759 106252786 + antisense NOVEL OTTHUMG00000187254.1 2028 2028 1 ENSG00000238609.1 RNU7-94P chr12 106282927 106282989 - snRNA KNOWN NA 63 63 1 ENSG00000166046.9 TCP11L2 chr12 106301929 106347015 + protein_coding KNOWN OTTHUMG00000170087.1 45087 6558 49 ENSG00000013503.8 POLR3B chr12 106357658 106510198 + protein_coding KNOWN OTTHUMG00000170077.1 152541 4858 64 ENSG00000230739.1 RP11-331H2.4 chr1 162824795 162849467 + unprocessed_pseudogene KNOWN OTTHUMG00000128965.1 24673 679 7 ENSG00000257545.3 RP11-144F15.1 chr12 106495958 106774918 - antisense NOVEL OTTHUMG00000170078.1 278961 890 7 ENSG00000111783.11 RFX4 chr12 106582907 106762803 + protein_coding KNOWN OTTHUMG00000169173.4 179897 6783 115 ENSG00000257711.1 RP11-482D24.2 chr12 106680758 106684700 - antisense NOVEL OTTHUMG00000170061.1 3943 863 4 ENSG00000257918.1 RP11-482D24.3 chr12 106714924 106733066 - antisense NOVEL OTTHUMG00000170079.1 18143 809 2 ENSG00000111785.17 RIC8B chr12 106774595 106889316 + protein_coding KNOWN OTTHUMG00000144188.8 114722 7795 86 ENSG00000257119.1 EEF1B2P4 chr12 106901283 106901984 - processed_pseudogene KNOWN OTTHUMG00000170035.1 702 348 2 ENSG00000240631.1 RPL30P12 chr12 106910757 106911109 + processed_pseudogene KNOWN OTTHUMG00000157716.1 353 353 1 ENSG00000260329.1 RP11-412D9.4 chr12 106954029 106955497 - antisense NOVEL OTTHUMG00000172911.2 1469 1469 1 ENSG00000151135.8 TMEM263 chr12 106955719 106978778 + protein_coding KNOWN OTTHUMG00000170014.2 23060 4768 33 ENSG00000120832.8 MTERF2 chr12 106977291 106987166 - protein_coding KNOWN OTTHUMG00000170007.1 9876 3626 18 ENSG00000227667.1 RP11-331H2.3 chr1 162979551 162979793 - processed_pseudogene KNOWN OTTHUMG00000034422.1 243 243 1 ENSG00000008405.10 CRY1 chr12 106991364 107093829 - protein_coding KNOWN OTTHUMG00000170005.1 102466 5062 35 ENSG00000257548.1 RP11-797M17.1 chr12 107093298 107123314 + antisense NOVEL OTTHUMG00000170006.1 30017 502 4 ENSG00000257444.1 SETP7 chr12 107271394 107271846 + processed_pseudogene KNOWN OTTHUMG00000169999.1 453 453 1 ENSG00000151136.13 BTBD11 chr12 107318413 107659642 + protein_coding KNOWN OTTHUMG00000150413.2 341230 7924 78 ENSG00000200897.1 SNORD74 chr12 107374747 107374827 + snoRNA NOVEL NA 81 81 1 ENSG00000222302.1 RNA5SP371 chr12 107486511 107486635 - rRNA KNOWN NA 125 125 1 ENSG00000257579.1 RP11-128P10.1 chr12 107610034 107617721 - antisense NOVEL OTTHUMG00000170000.1 7688 507 2 ENSG00000222160.1 Y_RNA chr12 107650789 107650892 + misc_RNA NOVEL NA 104 104 1 ENSG00000136045.10 PWP1 chr12 107685732 107713167 + protein_coding KNOWN OTTHUMG00000169913.1 27436 2876 46 ENSG00000240441.1 RP11-864J10.2 chr12 107719599 107720133 + processed_pseudogene KNOWN OTTHUMG00000157727.1 535 535 1 ENSG00000117152.12 RGS4 chr1 163068775 163076802 + protein_coding KNOWN OTTHUMG00000034417.4 8028 4836 48 ENSG00000110851.10 PRDM4 chr12 107732866 107761272 - protein_coding KNOWN OTTHUMG00000169914.1 28407 4777 39 ENSG00000258136.1 RP11-864J10.4 chr12 107736555 107759968 + antisense NOVEL OTTHUMG00000169915.1 23414 1714 7 ENSG00000187855.5 ASCL4 chr12 107774385 107776644 + protein_coding KNOWN OTTHUMG00000156964.1 2260 2260 1 ENSG00000263632.1 AC126177.1 chr12 107799635 107799720 - miRNA NOVEL NA 86 86 1 ENSG00000257141.1 RP11-554D14.7 chr12 107832858 107835030 - lincRNA NOVEL OTTHUMG00000169719.1 2173 452 2 ENSG00000274395.1 RP11-554D14.8 chr12 107835541 107836555 - lincRNA NOVEL OTTHUMG00000187381.1 1015 1015 1 ENSG00000257398.5 RP11-554D14.6 chr12 107839291 107864562 - lincRNA NOVEL OTTHUMG00000169720.2 25272 865 9 ENSG00000257951.1 RP11-554D14.4 chr12 107881242 107883382 + unprocessed_pseudogene KNOWN OTTHUMG00000169721.1 2141 949 2 ENSG00000257392.1 RP11-554D14.5 chr12 107887730 107889886 + unprocessed_pseudogene KNOWN OTTHUMG00000169722.1 2157 688 2 ENSG00000257426.1 RP11-554D14.3 chr12 107899638 107899815 + unprocessed_pseudogene KNOWN OTTHUMG00000169723.1 178 178 1 ENSG00000143248.11 RGS5 chr1 163111121 163321791 - protein_coding KNOWN OTTHUMG00000034441.4 210671 6821 58 ENSG00000258072.1 RP11-554D14.2 chr12 107903270 107903948 - processed_pseudogene KNOWN OTTHUMG00000169724.1 679 679 1 ENSG00000257129.1 RP11-554D14.1 chr12 107910403 107912620 - transcribed_processed_pseudogene KNOWN OTTHUMG00000169712.1 2218 2218 2 ENSG00000075035.8 WSCD2 chr12 108129471 108250537 + protein_coding KNOWN OTTHUMG00000169579.2 121067 6557 58 ENSG00000276750.1 AC009729.1 chr12 108133601 108133679 + miRNA NOVEL NA 79 79 1 ENSG00000257281.1 RP11-1K3.1 chr12 108281103 108282235 - processed_pseudogene KNOWN OTTHUMG00000169575.1 1133 1133 1 ENSG00000174600.12 CMKLR1 chr12 108288044 108339341 - protein_coding KNOWN OTTHUMG00000169576.1 51298 5690 19 ENSG00000280860.1 AC063957.1 chr12 108301525 108301596 - miRNA NOVEL NA 72 72 1 ENSG00000247213.5 LINC01498 chr12 108434130 108492585 - antisense NOVEL OTTHUMG00000169577.1 58456 3143 22 ENSG00000198855.5 FICD chr12 108515185 108525837 + protein_coding KNOWN OTTHUMG00000169569.1 10653 4267 12 ENSG00000075856.10 SART3 chr12 108522580 108561400 - protein_coding KNOWN OTTHUMG00000169449.3 38821 7271 125 ENSG00000232892.1 RP11-267N12.1 chr1 163161675 163213023 + antisense NOVEL OTTHUMG00000033126.1 51349 2633 4 ENSG00000136003.14 ISCU chr12 108562582 108569384 + protein_coding KNOWN OTTHUMG00000168420.4 6803 4439 58 ENSG00000183160.8 TMEM119 chr12 108589846 108598320 - protein_coding KNOWN OTTHUMG00000169410.1 8475 3189 11 ENSG00000110876.9 SELPLG chr12 108622277 108633959 - protein_coding KNOWN OTTHUMG00000169411.1 11683 2494 6 ENSG00000257221.1 RP11-689B22.2 chr12 108628687 108641318 + antisense NOVEL OTTHUMG00000169412.1 12632 859 6 ENSG00000110880.9 CORO1C chr12 108645109 108731596 - protein_coding KNOWN OTTHUMG00000169381.2 86488 6532 119 ENSG00000238457.1 RNU7-169P chr12 108668448 108668508 + snRNA KNOWN NA 61 61 1 ENSG00000200060.1 Y_RNA chr12 108738484 108738604 + misc_RNA NOVEL NA 121 121 1 ENSG00000273499.1 SNORA40 chr12 108778144 108778271 - snoRNA NOVEL NA 128 128 1 ENSG00000084112.13 SSH1 chr12 108778192 108857590 - protein_coding KNOWN OTTHUMG00000169371.2 79399 14537 72 ENSG00000280110.1 RP11-423G4.8 chr12 108778912 108779166 + TEC KNOWN OTTHUMG00000178772.1 255 255 1 ENSG00000225755.2 RP11-267N12.2 chr1 163237214 163239197 + processed_pseudogene KNOWN OTTHUMG00000033128.2 1984 1133 4 ENSG00000274598.1 RP11-423G4.10 chr12 108833721 108834384 - sense_intronic NOVEL OTTHUMG00000187432.1 664 664 1 ENSG00000207622.1 MIR619 chr12 108836908 108837006 - miRNA KNOWN NA 99 99 1 ENSG00000110887.6 DAO chr12 108858932 108901043 + protein_coding KNOWN OTTHUMG00000169360.1 42112 3883 60 ENSG00000166111.8 SVOP chr12 108907741 109021240 - protein_coding KNOWN OTTHUMG00000169432.3 113500 7270 32 ENSG00000201324.1 RNU6-361P chr12 108926435 108926541 - snRNA KNOWN NA 107 107 1 ENSG00000238424.1 AC190387.2 chr12 108987555 108987645 - miRNA NOVEL NA 91 91 1 ENSG00000279630.1 AC190387.1 chr12 109020833 109021240 - TEC KNOWN OTTHUMG00000169244.1 408 408 1 ENSG00000135093.11 USP30 chr12 109023089 109088026 + protein_coding KNOWN OTTHUMG00000133613.4 64938 5135 69 ENSG00000256262.1 USP30-AS1 chr12 109052350 109053952 - antisense NOVEL OTTHUMG00000169245.1 1603 656 2 ENSG00000212138.1 RNA5SP372 chr12 109059986 109060100 + rRNA KNOWN NA 115 115 1 ENSG00000232995.6 RGS5 chr1 163244505 163321894 - antisense NOVEL OTTHUMG00000033150.2 77390 3626 34 ENSG00000189046.9 ALKBH2 chr12 109088188 109093631 - protein_coding KNOWN OTTHUMG00000169246.3 5444 2290 22 ENSG00000076248.9 UNG chr12 109097574 109110992 + protein_coding KNOWN OTTHUMG00000169247.1 13419 2567 28 ENSG00000256139.2 RP11-968O1.5 chr12 109111218 109125594 + sense_overlapping NOVEL OTTHUMG00000185814.1 14377 910 3 ENSG00000076555.14 ACACB chr12 109116595 109268226 + protein_coding KNOWN OTTHUMG00000169250.3 151632 14505 211 ENSG00000139445.16 FOXN4 chr12 109277979 109309220 - protein_coding KNOWN OTTHUMG00000152868.3 31242 3471 26 ENSG00000174527.8 MYO1H chr12 109347903 109455523 + protein_coding KNOWN OTTHUMG00000169252.3 107621 4792 87 ENSG00000256560.1 LINC01486 chr12 109354083 109359488 - lincRNA NOVEL OTTHUMG00000169251.1 5406 716 3 ENSG00000255655.1 RP11-256L11.3 chr12 109445410 109447497 - antisense NOVEL OTTHUMG00000133568.2 2088 603 2 ENSG00000110906.11 KCTD10 chr12 109448656 109477544 - protein_coding KNOWN OTTHUMG00000169253.3 28889 9865 77 ENSG00000151148.12 UBE3B chr12 109477402 109536705 + protein_coding KNOWN OTTHUMG00000169254.3 59304 12453 172 ENSG00000237756.1 RP11-77M5.1 chr1 163259850 163260659 + lincRNA NOVEL OTTHUMG00000033149.1 810 469 2 ENSG00000139428.10 MMAB chr12 109553737 109573874 - protein_coding KNOWN OTTHUMG00000169255.4 20138 6290 68 ENSG00000200274.1 RNU4-32P chr12 109567975 109568115 - snRNA KNOWN NA 141 141 1 ENSG00000110921.10 MVK chr12 109573255 109598117 + protein_coding KNOWN OTTHUMG00000169256.3 24863 6473 100 ENSG00000200794.1 RN7SKP250 chr12 109662863 109663183 - misc_RNA KNOWN NA 321 321 1 ENSG00000139438.5 FAM222A chr12 109714228 109770507 + protein_coding KNOWN OTTHUMG00000169260.1 56280 3722 8 ENSG00000255650.4 FAM222A-AS1 chr12 109734166 109773508 - antisense KNOWN OTTHUMG00000169261.1 39343 1068 9 ENSG00000111199.9 TRPV4 chr12 109783085 109833401 - protein_coding KNOWN OTTHUMG00000169277.1 50317 3759 106 ENSG00000263510.1 MIR4497 chr12 109833348 109833436 + miRNA KNOWN NA 89 89 1 ENSG00000139433.8 GLTP chr12 109850943 109880488 - protein_coding KNOWN OTTHUMG00000169278.2 29546 2696 32 ENSG00000256351.1 RP1-7G5.5 chr12 109859767 109860420 - processed_pseudogene KNOWN OTTHUMG00000169279.1 654 343 2 ENSG00000143228.11 NUF2 chr1 163266576 163355764 + protein_coding KNOWN OTTHUMG00000034275.2 89189 3362 98 ENSG00000241413.3 RN7SL441P chr12 109866214 109866509 - misc_RNA KNOWN NA 296 296 1 ENSG00000249094.2 RP1-7G5.6 chr12 109880676 109888467 + lincRNA NOVEL OTTHUMG00000169280.1 7792 728 2 ENSG00000139437.16 TCHP chr12 109900264 109983841 + protein_coding KNOWN OTTHUMG00000169281.3 83578 9054 65 ENSG00000139436.19 GIT2 chr12 109929792 109996389 - protein_coding KNOWN OTTHUMG00000169313.4 66598 13542 216 ENSG00000277299.1 RP11-837J7.4 chr12 109948389 109949029 + antisense NOVEL OTTHUMG00000187452.1 641 641 1 ENSG00000280426.1 RP11-837J7.3 chr12 109997419 109999127 - TEC KNOWN OTTHUMG00000172928.1 1709 1709 1 ENSG00000076513.15 ANKRD13A chr12 109999186 110039763 + protein_coding KNOWN OTTHUMG00000169314.4 40578 7350 68 ENSG00000174456.12 C12orf76 chr12 110027028 110073686 - protein_coding KNOWN OTTHUMG00000169315.6 46659 7052 24 ENSG00000277595.1 RP11-946P6.6 chr12 110032245 110032803 + sense_intronic NOVEL OTTHUMG00000187458.1 559 559 1 ENSG00000279360.1 RP11-946P6.4 chr12 110056916 110057275 - TEC KNOWN OTTHUMG00000169316.1 360 360 1 ENSG00000230337.1 RP4-635E18.6 chr1 11099675 11102100 + antisense NOVEL OTTHUMG00000002122.1 2426 536 4 ENSG00000225122.1 RP11-408E1.1 chr1 163422405 163423164 - unprocessed_pseudogene KNOWN OTTHUMG00000034281.1 760 664 2 ENSG00000122970.14 IFT81 chr12 110124335 110218797 + protein_coding KNOWN OTTHUMG00000169326.2 94463 7005 98 ENSG00000174437.15 ATP2A2 chr12 110280756 110351093 + protein_coding KNOWN OTTHUMG00000169327.4 70338 13745 100 ENSG00000276956.1 Metazoa_SRP chr12 110360452 110360746 - misc_RNA NOVEL NA 295 295 1 ENSG00000281030.1 AC006088.1 chr12 110360456 110360538 - miRNA NOVEL NA 83 83 1 ENSG00000196510.11 ANAPC7 chr12 110372900 110403730 - protein_coding KNOWN OTTHUMG00000157009.5 30831 6009 57 ENSG00000258210.1 RP11-478C19.2 chr12 110387463 110445548 - processed_transcript NOVEL OTTHUMG00000169522.1 58086 946 5 ENSG00000258011.2 HMGA1P3 chr12 110429959 110430282 - processed_pseudogene KNOWN OTTHUMG00000169523.2 324 324 1 ENSG00000111229.14 ARPC3 chr12 110434825 110450422 - protein_coding KNOWN OTTHUMG00000134333.3 15598 3025 33 ENSG00000111231.7 GPN3 chr12 110452484 110469268 - protein_coding KNOWN OTTHUMG00000169524.4 16785 2595 48 ENSG00000241680.1 RPL31P49 chr12 110460988 110461362 + processed_pseudogene KNOWN OTTHUMG00000157730.1 375 375 1 ENSG00000200327.1 RNA5SP62 chr1 163468496 163468605 - rRNA KNOWN NA 110 110 1 ENSG00000204856.10 FAM216A chr12 110468364 110490385 + protein_coding KNOWN OTTHUMG00000169526.2 22022 2753 27 ENSG00000111237.17 VPS29 chr12 110491097 110502117 - protein_coding KNOWN OTTHUMG00000169527.4 11021 3211 49 ENSG00000202335.1 SNORD50 chr12 110496352 110496421 - snoRNA NOVEL NA 70 70 1 ENSG00000278993.1 RP3-424M6.4 chr12 110501614 110503441 + TEC KNOWN OTTHUMG00000169528.1 1828 1828 1 ENSG00000151164.17 RAD9B chr12 110501655 110532086 + protein_coding KNOWN OTTHUMG00000152952.3 30432 3178 82 ENSG00000196850.5 PPTC7 chr12 110533245 110583320 - protein_coding KNOWN OTTHUMG00000169529.2 50076 5687 10 ENSG00000204852.14 TCTN1 chr12 110614027 110649430 + protein_coding KNOWN OTTHUMG00000150051.7 35404 9605 220 ENSG00000263537.2 RN7SL387P chr12 110625645 110625917 - misc_RNA KNOWN NA 273 273 1 ENSG00000122986.12 HVCN1 chr12 110627841 110704950 - protein_coding KNOWN OTTHUMG00000169530.2 77110 3688 54 ENSG00000221246.1 AC144522.1 chr12 110632604 110632693 + miRNA NOVEL NA 90 90 1 ENSG00000212527.1 RNA5SP63 chr1 163509484 163509595 + rRNA KNOWN NA 112 112 1 ENSG00000186298.10 PPP1CC chr12 110719680 110742939 - protein_coding KNOWN OTTHUMG00000169531.3 23260 6906 52 ENSG00000279925.1 RP11-481J8.3 chr12 110744549 110746206 + TEC KNOWN OTTHUMG00000169532.1 1658 1658 1 ENSG00000257268.1 RP1-74B13.2 chr12 110831779 110845963 + lincRNA NOVEL OTTHUMG00000169533.1 14185 581 2 ENSG00000241286.2 RPL29P25 chr12 110841538 110842387 - processed_pseudogene KNOWN OTTHUMG00000157733.2 850 850 1 ENSG00000173093.11 CCDC63 chr12 110846769 110907535 + protein_coding KNOWN OTTHUMG00000169534.2 60767 2184 37 ENSG00000111245.13 MYL2 chr12 110910819 110920722 - protein_coding KNOWN OTTHUMG00000169535.2 9904 1362 17 ENSG00000185847.6 LINC01405 chr12 110936585 110958208 + lincRNA NOVEL OTTHUMG00000169536.1 21624 1522 11 ENSG00000258240.4 RP1-46F2.3 chr12 110951683 110957812 - lincRNA NOVEL OTTHUMG00000169537.1 6130 594 8 ENSG00000111249.12 CUX2 chr12 111034024 111350554 + protein_coding KNOWN OTTHUMG00000169546.2 316531 7648 34 ENSG00000221259.1 AC002978.1 chr12 111073968 111074089 + miRNA NOVEL NA 122 122 1 ENSG00000228289.1 RP4-640E24.1 chr1 163769339 163769691 - processed_pseudogene KNOWN OTTHUMG00000033216.1 353 353 1 ENSG00000221386.1 AC002979.1 chr12 111302800 111302899 + miRNA NOVEL NA 100 100 1 ENSG00000273700.1 MIR6760 chr12 111304142 111304209 + miRNA KNOWN NA 68 68 1 ENSG00000253080.1 RNA5SP373 chr12 111339527 111339621 + rRNA KNOWN NA 95 95 1 ENSG00000198324.13 FAM109A chr12 111360651 111369121 - protein_coding KNOWN OTTHUMG00000169547.2 8471 3361 13 ENSG00000257595.2 RP3-473L9.4 chr12 111369282 111403310 + lincRNA NOVEL OTTHUMG00000169548.1 34029 353 5 ENSG00000257539.2 HSPA8P14 chr12 111381867 111385638 + processed_pseudogene KNOWN OTTHUMG00000169549.2 3772 1805 5 ENSG00000111252.9 SH2B3 chr12 111405948 111451623 + protein_coding KNOWN OTTHUMG00000169550.4 45676 5682 17 ENSG00000204842.13 ATXN2 chr12 111452214 111599676 - protein_coding KNOWN OTTHUMG00000133475.7 147463 13933 282 ENSG00000266269.1 AC002395.1 chr12 111487478 111487578 - miRNA NOVEL NA 101 101 1 ENSG00000272215.1 U7 chr12 111564821 111564883 - snRNA NOVEL NA 63 63 1 ENSG00000212538.2 U3 chr1 163923670 163923873 + snoRNA NOVEL NA 204 204 1 ENSG00000238168.5 RP11-686G8.1 chr12 111581379 111581773 + processed_pseudogene KNOWN OTTHUMG00000169598.2 395 395 1 ENSG00000281280.1 AC137055.1 chr12 111598951 111599031 - miRNA NOVEL NA 81 81 1 ENSG00000258099.1 RP11-686G8.2 chr12 111599498 111600256 + antisense NOVEL OTTHUMG00000169599.1 759 485 2 ENSG00000089234.14 BRAP chr12 111642146 111685986 - protein_coding KNOWN OTTHUMG00000169600.4 43841 4686 32 ENSG00000273903.1 RP11-686G8.5 chr12 111649573 111649938 + antisense NOVEL OTTHUMG00000187442.1 366 366 1 ENSG00000258359.1 PCNPP1 chr12 111669852 111670362 - processed_pseudogene KNOWN OTTHUMG00000169601.1 511 511 1 ENSG00000111271.13 ACAD10 chr12 111686056 111757107 + protein_coding KNOWN OTTHUMG00000169602.3 71052 8931 168 ENSG00000257767.2 RP11-162P23.2 chr12 111753890 111791418 + protein_coding KNOWN OTTHUMG00000162267.4 37529 784 8 ENSG00000111275.11 ALDH2 chr12 111766887 111817529 + protein_coding KNOWN OTTHUMG00000169603.4 50643 9720 45 ENSG00000274697.1 MIR6761 chr12 111799834 111799905 + miRNA KNOWN NA 72 72 1 ENSG00000225719.2 NMNAT1P2 chr1 164343005 164343864 + processed_pseudogene KNOWN OTTHUMG00000034278.2 860 860 1 ENSG00000234608.6 MAPKAPK5-AS1 chr12 111839764 111842902 - lincRNA NOVEL OTTHUMG00000141273.4 3139 2290 19 ENSG00000089022.12 MAPKAPK5 chr12 111841978 111902238 + protein_coding KNOWN OTTHUMG00000169605.5 60261 14006 65 ENSG00000244060.2 RPS2P41 chr12 111879338 111880249 - processed_pseudogene KNOWN OTTHUMG00000157736.2 912 603 2 ENSG00000229186.4 ADAM1A chr12 111899263 111901391 + unitary_pseudogene KNOWN OTTHUMG00000154247.2 2129 2129 1 ENSG00000226469.1 ADAM1B chr12 111927018 111929017 + unitary_pseudogene KNOWN OTTHUMG00000154246.1 2000 2000 1 ENSG00000198270.11 TMEM116 chr12 111931282 112013185 - protein_coding KNOWN OTTHUMG00000169606.6 81904 7989 129 ENSG00000258373.1 SLC25A3P2 chr12 111992996 111993875 + processed_pseudogene KNOWN OTTHUMG00000169607.1 880 880 1 ENSG00000257624.1 RP1-128M12.3 chr12 112000739 112000985 - processed_pseudogene KNOWN OTTHUMG00000169608.1 247 247 1 ENSG00000089248.6 ERP29 chr12 112013316 112023451 + protein_coding KNOWN OTTHUMG00000169637.2 10136 3083 12 ENSG00000274227.1 RP1-267L14.6 chr12 112018804 112019430 - antisense NOVEL OTTHUMG00000187449.1 627 627 1 ENSG00000199849.1 RNU5F-6P chr1 164351273 164351388 + snRNA KNOWN NA 116 116 1 ENSG00000111300.8 NAA25 chr12 112026689 112109022 - protein_coding KNOWN OTTHUMG00000169638.2 82334 10128 106 ENSG00000266370.1 MIR3657 chr12 112037599 112037715 - miRNA KNOWN NA 117 117 1 ENSG00000258323.1 RP1-267L14.3 chr12 112063909 112065755 + antisense NOVEL OTTHUMG00000169639.1 1847 596 2 ENSG00000200688.1 Y_RNA chr12 112069104 112069209 + misc_RNA NOVEL NA 106 106 1 ENSG00000135148.10 TRAFD1 chr12 112125501 112153609 + protein_coding KNOWN OTTHUMG00000169640.3 28109 3940 66 ENSG00000200135.1 Y_RNA chr12 112149360 112149472 + misc_RNA NOVEL NA 113 113 1 ENSG00000173064.9 HECTD4 chr12 112160188 112382439 - protein_coding KNOWN OTTHUMG00000150719.7 222252 21572 215 ENSG00000273826.1 MIR6861 chr12 112163258 112163321 - miRNA KNOWN NA 64 64 1 ENSG00000257494.1 RP3-521E19.2 chr12 112256800 112259091 + antisense NOVEL OTTHUMG00000169683.1 2292 751 2 ENSG00000201428.1 RN7SKP71 chr12 112267077 112267394 + misc_RNA KNOWN NA 318 318 1 ENSG00000213070.3 HMGB3P6 chr1 164356767 164357364 + processed_pseudogene KNOWN OTTHUMG00000034279.1 598 598 1 ENSG00000213152.5 RPL7AP60 chr12 112301870 112302663 - processed_pseudogene KNOWN OTTHUMG00000157739.2 794 794 1 ENSG00000257658.1 RP3-521E19.3 chr12 112321759 112323089 + processed_pseudogene KNOWN OTTHUMG00000169684.1 1331 878 3 ENSG00000089009.14 RPL6 chr12 112405190 112418838 - protein_coding KNOWN OTTHUMG00000169685.3 13649 4447 54 ENSG00000179295.14 PTPN11 chr12 112418351 112509913 + protein_coding KNOWN OTTHUMG00000134334.2 91563 6996 33 ENSG00000089169.13 RPH3A chr12 112570380 112898881 + protein_coding KNOWN OTTHUMG00000169713.12 328502 10369 250 ENSG00000089127.11 OAS1 chr12 112906777 112933222 + protein_coding KNOWN OTTHUMG00000169792.5 26446 4947 42 ENSG00000257452.1 RP1-71H24.1 chr12 112907628 113017751 - antisense NOVEL OTTHUMG00000169793.1 110124 575 3 ENSG00000111331.11 OAS3 chr12 112938352 112973249 + protein_coding KNOWN OTTHUMG00000169795.1 34898 8251 32 ENSG00000111335.11 OAS2 chr12 112978395 113011723 + protein_coding KNOWN OTTHUMG00000169802.2 33329 6264 48 ENSG00000258159.1 IMMP1LP2 chr12 113015607 113016098 + processed_pseudogene KNOWN OTTHUMG00000169801.1 492 492 1 ENSG00000185630.17 PBX1 chr1 164555584 164899296 + protein_coding KNOWN OTTHUMG00000034307.12 343713 21249 119 ENSG00000242461.1 RPS15AP32 chr12 113054062 113054435 + processed_pseudogene KNOWN OTTHUMG00000157740.1 374 374 1 ENSG00000135144.6 DTX1 chr12 113056709 113098028 + protein_coding KNOWN OTTHUMG00000169610.2 41320 4387 24 ENSG00000111344.10 RASAL1 chr12 113098819 113136239 - protein_coding KNOWN OTTHUMG00000169705.2 37421 4813 164 ENSG00000186710.10 CCDC42B chr12 113149858 113159276 + protein_coding KNOWN OTTHUMG00000169655.1 9419 1726 16 ENSG00000199899.2 Y_RNA chr12 113156763 113156861 - misc_RNA NOVEL NA 99 99 1 ENSG00000123064.11 DDX54 chr12 113157174 113185479 - protein_coding KNOWN OTTHUMG00000169676.2 28306 5064 76 ENSG00000276908.1 MIR7106 chr12 113159113 113159177 - miRNA KNOWN NA 65 65 1 ENSG00000201208.1 Y_RNA chr12 113178423 113178519 - misc_RNA NOVEL NA 97 97 1 ENSG00000139405.14 RITA1 chr12 113185526 113192368 + protein_coding KNOWN OTTHUMG00000169643.3 6843 2309 12 ENSG00000257286.1 RP11-545P7.4 chr12 113185624 113192161 - antisense NOVEL OTTHUMG00000169656.1 6538 248 2 ENSG00000274155.2 AL391001.1 chr1 164589480 164589615 + miRNA NOVEL NA 136 136 1 ENSG00000166578.8 IQCD chr12 113195441 113221094 - protein_coding KNOWN OTTHUMG00000169659.1 25654 2460 11 ENSG00000186815.11 TPCN1 chr12 113221050 113298585 + protein_coding KNOWN OTTHUMG00000169625.5 77536 8728 248 ENSG00000277566.1 RP11-545P7.9 chr12 113249466 113250042 + sense_intronic NOVEL OTTHUMG00000187464.1 577 577 1 ENSG00000274822.1 MIR6762 chr12 113291523 113291608 + miRNA KNOWN NA 86 86 1 ENSG00000089060.10 SLC8B1 chr12 113298759 113359493 - protein_coding KNOWN OTTHUMG00000169566.4 60735 6768 130 ENSG00000151176.6 PLBD2 chr12 113358566 113391625 + protein_coding KNOWN OTTHUMG00000169567.2 33060 5260 29 ENSG00000135094.9 SDS chr12 113392445 113426301 - protein_coding KNOWN OTTHUMG00000169554.1 33857 3006 28 ENSG00000139410.13 SDSL chr12 113422237 113438276 + protein_coding KNOWN OTTHUMG00000169551.1 16040 2216 32 ENSG00000089116.3 LHX5 chr12 113462034 113472280 - protein_coding KNOWN OTTHUMG00000169552.3 10247 3125 7 ENSG00000257935.2 LHX5-AS1 chr12 113472003 113480624 + antisense NOVEL OTTHUMG00000169553.2 8622 522 2 ENSG00000198793.11 MTOR chr1 11106535 11262507 - protein_coding KNOWN OTTHUMG00000002001.2 155973 12119 106 ENSG00000207082.1 RNU6-171P chr1 164639565 164639671 + snRNA KNOWN NA 107 107 1 ENSG00000249550.5 LINC01234 chr12 113679459 113773683 - lincRNA NOVEL OTTHUMG00000169644.1 94225 4484 15 ENSG00000257231.1 DYNLL1P4 chr12 113789542 113789807 - processed_pseudogene KNOWN OTTHUMG00000169645.1 266 266 1 ENSG00000122965.9 RBM19 chr12 113816738 113966371 - protein_coding KNOWN OTTHUMG00000169646.2 149634 5912 90 ENSG00000257359.1 RP11-780K2.1 chr12 113932569 113937255 + antisense NOVEL OTTHUMG00000169647.1 4687 570 2 ENSG00000257603.1 RP11-100F15.1 chr12 114077133 114079902 + lincRNA NOVEL OTTHUMG00000169476.1 2770 559 2 ENSG00000257997.4 RP11-100F15.2 chr12 114080381 114113489 + lincRNA NOVEL OTTHUMG00000169477.1 33109 390 6 ENSG00000257300.1 HAUS8P1 chr12 114097682 114098223 + processed_pseudogene KNOWN OTTHUMG00000169478.1 542 542 1 ENSG00000257915.1 GLULP5 chr12 114104542 114105931 + processed_pseudogene KNOWN OTTHUMG00000169479.1 1390 1390 1 ENSG00000257476.1 RP11-139B1.1 chr12 114238970 114241770 - lincRNA NOVEL OTTHUMG00000169468.1 2801 474 2 ENSG00000280861.1 AC009260.1 chr12 114340790 114340908 + miRNA NOVEL NA 119 119 1 ENSG00000277116.1 AL391001.2 chr1 164675324 164675424 + miRNA NOVEL NA 101 101 1 ENSG00000089225.18 TBX5 chr12 114353931 114408442 - protein_coding KNOWN OTTHUMG00000166191.2 54512 4363 38 ENSG00000255399.3 TBX5-AS1 chr12 114408191 114412831 + antisense NOVEL OTTHUMG00000166190.2 4641 4183 10 ENSG00000222982.1 RN7SKP216 chr12 114504876 114505187 - misc_RNA KNOWN NA 312 312 1 ENSG00000255830.2 RP11-385N17.3 chr12 114548854 114549852 + processed_pseudogene KNOWN OTTHUMG00000169590.2 999 375 2 ENSG00000265632.1 AC069240.1 chr12 114550762 114550849 - miRNA NOVEL NA 88 88 1 ENSG00000258244.1 OSTF1P1 chr12 114588194 114588802 + processed_pseudogene KNOWN OTTHUMG00000169591.1 609 609 1 ENSG00000258254.1 RP11-162N7.1 chr12 114621761 114622922 + lincRNA NOVEL OTTHUMG00000169480.1 1162 366 2 ENSG00000199220.1 Y_RNA chr12 114657949 114658062 - misc_RNA NOVEL NA 114 114 1 ENSG00000135111.13 TBX3 chr12 114670254 114684164 - protein_coding KNOWN OTTHUMG00000169586.2 13911 5950 29 ENSG00000257817.1 RP4-601P9.2 chr12 114713811 114767957 + lincRNA NOVEL OTTHUMG00000169584.1 54147 1330 5 ENSG00000269887.1 RP11-477H21.2 chr1 164680085 164680799 + sense_intronic NOVEL OTTHUMG00000184145.1 715 715 1 ENSG00000252459.1 SNORA27 chr12 114737704 114737798 + snoRNA NOVEL NA 95 95 1 ENSG00000257517.1 RP4-601P9.1 chr12 114768674 114771851 + lincRNA NOVEL OTTHUMG00000169585.1 3178 435 2 ENSG00000274879.1 RP11-411G2.1 chr12 114929757 114929935 - processed_pseudogene KNOWN OTTHUMG00000187899.1 179 179 1 ENSG00000257958.1 RP11-25E2.1 chr12 115077325 115080153 + lincRNA NOVEL OTTHUMG00000169467.1 2829 1538 2 ENSG00000257519.1 RP11-116D17.2 chr12 115263170 115270596 + lincRNA NOVEL OTTHUMG00000169466.1 7427 553 2 ENSG00000271579.1 RP11-116D17.3 chr12 115299588 115300708 - lincRNA NOVEL OTTHUMG00000185160.1 1121 1121 1 ENSG00000276308.1 RP11-116D17.4 chr12 115318657 115320405 - lincRNA NOVEL OTTHUMG00000187123.1 1749 1749 1 ENSG00000276972.1 RP11-116D17.5 chr12 115332146 115332566 - lincRNA NOVEL OTTHUMG00000187124.1 421 421 1 ENSG00000257726.1 RP11-116D17.1 chr12 115363012 115364745 + lincRNA NOVEL OTTHUMG00000169465.1 1734 843 2 ENSG00000258108.1 RP11-1028N23.3 chr12 115569664 115581739 + lincRNA NOVEL OTTHUMG00000169399.1 12076 665 6 ENSG00000276359.1 Metazoa_SRP chr1 164703026 164703309 - misc_RNA NOVEL NA 284 284 1 ENSG00000258280.1 RP11-1028N23.2 chr12 115576676 115577615 + lincRNA NOVEL OTTHUMG00000169400.1 940 540 2 ENSG00000257407.1 RP11-1028N23.4 chr12 115582061 115639734 - lincRNA NOVEL OTTHUMG00000169401.1 57674 785 8 ENSG00000241656.1 UBA52P7 chr12 115592604 115592983 - processed_pseudogene KNOWN OTTHUMG00000158498.1 380 380 1 ENSG00000240205.3 RN7SL865P chr12 115717725 115718013 + misc_RNA KNOWN NA 289 289 1 ENSG00000257781.1 RP11-110L15.1 chr12 115755262 115799936 + lincRNA NOVEL OTTHUMG00000169402.1 44675 441 3 ENSG00000257683.1 RP11-110L15.2 chr12 115810359 115886137 - lincRNA NOVEL OTTHUMG00000169403.1 75779 497 3 ENSG00000200112.1 SNORD56 chr12 115852648 115852718 - snoRNA NOVEL NA 71 71 1 ENSG00000123066.6 MED13L chr12 115953872 116277338 - protein_coding KNOWN OTTHUMG00000169404.4 323467 17290 53 ENSG00000258034.1 RP11-493P1.2 chr12 115961187 115962733 + antisense NOVEL OTTHUMG00000169460.1 1547 501 2 ENSG00000200665.1 RNU6-1188P chr12 116082570 116082676 + snRNA KNOWN NA 107 107 1 ENSG00000233693.1 RP11-506O24.1 chr1 164769116 164774641 - antisense NOVEL OTTHUMG00000034481.1 5526 1963 4 ENSG00000207967.1 MIR620 chr12 116148560 116148654 - miRNA KNOWN NA 95 95 1 ENSG00000257979.1 SNRPGP18 chr12 116169045 116169258 + processed_pseudogene KNOWN OTTHUMG00000169455.1 214 214 1 ENSG00000258337.1 RP11-115H15.2 chr12 116174502 116181295 - sense_intronic NOVEL OTTHUMG00000169461.1 6794 493 2 ENSG00000263768.1 AC060226.1 chr12 116255883 116255988 - miRNA NOVEL NA 106 106 1 ENSG00000258346.1 RP11-148B3.2 chr12 116368764 116389471 + lincRNA NOVEL OTTHUMG00000169463.1 20708 600 5 ENSG00000264037.1 MIR4472-2 chr12 116428252 116428318 - miRNA KNOWN NA 67 67 1 ENSG00000258018.1 RP11-148B3.1 chr12 116517858 116518820 + lincRNA NOVEL OTTHUMG00000169394.1 963 596 2 ENSG00000196668.3 LINC00173 chr12 116533422 116536518 + processed_transcript NOVEL OTTHUMG00000157726.1 3097 2065 9 ENSG00000258102.2 MAP1LC3B2 chr12 116548105 116576448 + protein_coding KNOWN OTTHUMG00000171525.2 28344 1767 13 ENSG00000275898.1 RP11-497G19.7 chr12 116580974 116583672 + lincRNA NOVEL OTTHUMG00000172915.1 2699 2699 1 ENSG00000271917.1 RP11-506O24.2 chr1 164828436 164829952 + sense_intronic NOVEL OTTHUMG00000185515.1 1517 1517 1 ENSG00000258249.1 RP11-497G19.3 chr12 116599270 116603585 + lincRNA NOVEL OTTHUMG00000169388.1 4316 486 2 ENSG00000257883.1 RP11-497G19.1 chr12 116661582 116698065 + lincRNA NOVEL OTTHUMG00000169385.1 36484 876 2 ENSG00000257654.1 RP11-497G19.2 chr12 116698336 116703130 + lincRNA NOVEL OTTHUMG00000169386.1 4795 366 2 ENSG00000111412.5 C12orf49 chr12 116710185 116738070 - protein_coding KNOWN OTTHUMG00000169392.2 27886 8664 13 ENSG00000135119.13 RNFT2 chr12 116738178 116853631 + protein_coding KNOWN OTTHUMG00000150882.4 115454 6487 67 ENSG00000239374.1 RP11-407P2.1 chr12 116755395 116755874 - processed_pseudogene KNOWN OTTHUMG00000157742.1 480 480 1 ENSG00000201382.1 RNU6-558P chr12 116782105 116782208 + snRNA KNOWN NA 104 104 1 ENSG00000275467.1 RP11-240G22.4 chr12 116801023 116801477 + lincRNA NOVEL OTTHUMG00000187132.1 455 455 1 ENSG00000135116.8 HRK chr12 116856144 116881441 - protein_coding KNOWN OTTHUMG00000169328.3 25298 6853 12 ENSG00000240100.1 RP11-240G22.1 chr12 116908312 116908627 + processed_pseudogene KNOWN OTTHUMG00000157748.1 316 316 1 ENSG00000201987.1 Y_RNA chr1 164854231 164854332 + misc_RNA NOVEL NA 102 102 1 ENSG00000174989.11 FBXW8 chr12 116910956 117031148 + protein_coding KNOWN OTTHUMG00000169329.1 120193 5169 24 ENSG00000274554.1 RP11-240G22.5 chr12 116948738 116951422 - antisense NOVEL OTTHUMG00000187137.1 2685 2685 1 ENSG00000257279.1 RP11-231I16.1 chr12 116977442 116987337 - antisense NOVEL OTTHUMG00000169330.1 9896 4196 4 ENSG00000277840.1 RP11-103B5.4 chr12 117002463 117003152 + sense_intronic NOVEL OTTHUMG00000187138.1 690 690 1 ENSG00000088992.16 TESC chr12 117038923 117099479 - protein_coding KNOWN OTTHUMG00000144168.4 60557 1926 44 ENSG00000258285.1 TESC-AS1 chr12 117099481 117142091 + lincRNA NOVEL OTTHUMG00000169494.1 42611 1053 3 ENSG00000135108.13 FBXO21 chr12 117141988 117190531 - protein_coding KNOWN OTTHUMG00000169495.2 48544 6949 66 ENSG00000089250.17 NOS1 chr12 117208142 117452170 - protein_coding KNOWN OTTHUMG00000137376.3 244029 13113 123 ENSG00000257465.2 TCEB1P32 chr12 117245551 117246164 - processed_pseudogene KNOWN OTTHUMG00000169496.2 614 324 2 ENSG00000281291.1 AC068799.1 chr12 117278268 117278361 - miRNA NOVEL NA 94 94 1 ENSG00000225487.2 RP11-403P14.1 chr1 164921318 164921629 - processed_pseudogene KNOWN OTTHUMG00000034480.2 312 312 1 ENSG00000255686.1 RP11-227B21.2 chr12 117453012 117456986 + lincRNA NOVEL OTTHUMG00000169111.1 3975 562 2 ENSG00000171435.12 KSR2 chr12 117453012 117968983 - protein_coding KNOWN OTTHUMG00000169020.3 515972 18294 55 ENSG00000281843.1 AC079127.1 chr12 117557441 117557571 + miRNA NOVEL NA 131 131 1 ENSG00000256071.1 RP11-465L8.1 chr12 117889454 117891008 + antisense NOVEL OTTHUMG00000169021.1 1555 548 2 ENSG00000111445.12 RFC5 chr12 118013588 118033130 + protein_coding KNOWN OTTHUMG00000156438.3 19543 3249 62 ENSG00000277873.1 RP11-33N14.3 chr12 118024817 118025518 - antisense NOVEL OTTHUMG00000187211.1 702 702 1 ENSG00000176871.7 WSB2 chr12 118032694 118062430 - protein_coding KNOWN OTTHUMG00000168885.4 29737 4616 72 ENSG00000276292.1 RP11-33N14.5 chr12 118037869 118038081 + antisense NOVEL OTTHUMG00000187214.1 213 213 1 ENSG00000176834.12 VSIG10 chr12 118063593 118136026 - protein_coding KNOWN OTTHUMG00000168835.7 72434 8350 42 ENSG00000274859.1 RP11-136L23.2 chr12 118066398 118066725 + antisense NOVEL OTTHUMG00000187217.1 328 328 1 ENSG00000201270.1 RNU6-755P chr1 164980035 164980137 - snRNA KNOWN NA 103 103 1 ENSG00000089220.4 PEBP1 chr12 118135858 118145584 + protein_coding KNOWN OTTHUMG00000168860.1 9727 1780 7 ENSG00000135090.12 TAOK3 chr12 118149801 118372945 - protein_coding KNOWN OTTHUMG00000168875.8 223145 10570 127 ENSG00000221280.2 AC026366.1 chr12 118166799 118166875 + miRNA NOVEL NA 77 77 1 ENSG00000240342.3 RPS2P5 chr12 118246084 118246962 + processed_pseudogene KNOWN OTTHUMG00000157753.1 879 879 1 ENSG00000278227.1 AC026367.1 chr12 118368464 118368558 + miRNA NOVEL NA 95 95 1 ENSG00000270482.1 RP11-131L12.2 chr12 118375350 118376275 - lincRNA NOVEL OTTHUMG00000185168.1 926 611 2 ENSG00000111707.10 SUDS3 chr12 118376380 118418031 + protein_coding KNOWN OTTHUMG00000168884.1 41652 5731 23 ENSG00000275759.1 RP11-131L12.3 chr12 118428281 118428870 + lincRNA NOVEL OTTHUMG00000187234.1 590 590 1 ENSG00000275409.1 RP11-131L12.4 chr12 118430147 118430699 + lincRNA NOVEL OTTHUMG00000187235.1 553 553 1 ENSG00000255714.1 RP11-121J20.1 chr12 118645315 118648724 - lincRNA NOVEL OTTHUMG00000168901.1 3410 536 3 ENSG00000212086.1 AL390119.1 chr1 164983902 164983992 - miRNA NOVEL NA 91 91 1 ENSG00000241590.1 RPL17P37 chr12 118737964 118738511 - processed_pseudogene KNOWN OTTHUMG00000157755.1 548 548 1 ENSG00000256750.1 RP11-3L23.2 chr12 118758754 118761679 - lincRNA NOVEL OTTHUMG00000168902.1 2926 460 5 ENSG00000255618.1 RP11-357K6.1 chr12 118773032 118775137 - lincRNA NOVEL OTTHUMG00000168911.1 2106 680 4 ENSG00000255814.1 RP11-357K6.2 chr12 118818804 118833536 - lincRNA NOVEL OTTHUMG00000168912.1 14733 450 3 ENSG00000199809.1 RNA5SP374 chr12 118829681 118829805 + rRNA KNOWN NA 125 125 1 ENSG00000256149.1 RP11-357K6.3 chr12 118849354 118908930 - lincRNA NOVEL OTTHUMG00000168913.1 59577 570 5 ENSG00000201042.1 SNORA38 chr12 118888434 118888564 - snoRNA NOVEL NA 131 131 1 ENSG00000139767.7 SRRM4 chr12 118981495 119163051 + protein_coding KNOWN OTTHUMG00000168928.2 181557 8835 25 ENSG00000244112.3 RN7SL508P chr12 118993857 118994159 + misc_RNA KNOWN NA 303 303 1 ENSG00000256031.1 RP11-364C11.3 chr12 119000776 119001842 + sense_intronic NOVEL OTTHUMG00000168930.1 1067 455 3 ENSG00000225602.4 MTOR-AS1 chr1 11143898 11149537 + antisense NOVEL OTTHUMG00000002003.1 5640 763 8 ENSG00000162761.13 LMX1A chr1 165201867 165356715 - protein_coding KNOWN OTTHUMG00000034575.3 154849 4185 33 ENSG00000257095.1 RP11-364C11.2 chr12 119031039 119116961 - antisense NOVEL OTTHUMG00000168929.1 85923 607 4 ENSG00000256884.1 RP11-64B16.3 chr12 119174065 119176484 - antisense NOVEL OTTHUMG00000168931.1 2420 577 2 ENSG00000152137.5 HSPB8 chr12 119178642 119221131 + protein_coding KNOWN OTTHUMG00000168932.2 42490 2860 9 ENSG00000256609.1 RP11-64B16.4 chr12 119182048 119183259 - antisense NOVEL OTTHUMG00000168934.1 1212 541 2 ENSG00000213144.2 RP11-64B16.2 chr12 119194850 119195394 + processed_pseudogene KNOWN OTTHUMG00000168933.1 545 545 1 ENSG00000256311.1 RP11-64B16.5 chr12 119225834 119259017 - antisense NOVEL OTTHUMG00000168935.1 33184 501 5 ENSG00000281196.1 LINC00934 chr12 119283825 119303380 - lincRNA KNOWN OTTHUMG00000189518.1 19556 2381 5 ENSG00000183273.5 CCDC60 chr12 119334712 119541047 + protein_coding KNOWN OTTHUMG00000168943.1 206336 3440 28 ENSG00000248636.5 RP11-768F21.1 chr12 119387987 119668079 - lincRNA NOVEL OTTHUMG00000168955.1 280093 1013 10 ENSG00000222647.1 AC002070.1 chr12 119580792 119580895 + miRNA NOVEL NA 104 104 1 ENSG00000224702.1 RP11-38C18.2 chr1 165210627 165213090 + antisense NOVEL OTTHUMG00000040114.1 2464 692 3 ENSG00000224982.3 TMEM233 chr12 119593459 119643066 + protein_coding KNOWN OTTHUMG00000168944.3 49608 3146 7 ENSG00000252886.1 RN7SKP197 chr12 119631090 119631386 - misc_RNA KNOWN NA 297 297 1 ENSG00000111725.9 PRKAB1 chr12 119667753 119681630 + protein_coding KNOWN OTTHUMG00000168954.3 13878 6246 41 ENSG00000122966.12 CIT chr12 119685790 119877291 - protein_coding KNOWN OTTHUMG00000134325.7 191502 13230 264 ENSG00000255692.1 RP1-127H14.3 chr12 119699768 119701011 + antisense NOVEL OTTHUMG00000168976.1 1244 451 2 ENSG00000221323.1 MIR1178 chr12 119713634 119713724 - miRNA KNOWN NA 91 91 1 ENSG00000279777.1 AC004813.1 chr12 119918001 119918375 + protein_coding KNOWN NA 375 375 1 ENSG00000226729.3 RPL35AP30 chr12 119959424 119959754 + processed_pseudogene KNOWN OTTHUMG00000157759.1 331 331 1 ENSG00000135127.10 CCDC64 chr12 119989869 120094494 + protein_coding KNOWN OTTHUMG00000169311.5 104626 5484 45 ENSG00000278250.1 Metazoa_SRP chr12 120018900 120019261 + misc_RNA NOVEL NA 362 362 1 ENSG00000238022.1 RP11-38C18.3 chr1 165215980 165219104 + antisense NOVEL OTTHUMG00000040115.1 3125 756 4 ENSG00000255575.1 RP1-267D11.1 chr12 120057035 120057180 + processed_pseudogene KNOWN OTTHUMG00000169158.2 146 146 1 ENSG00000111737.10 RAB35 chr12 120095095 120117502 - protein_coding KNOWN OTTHUMG00000169159.3 22408 4022 32 ENSG00000277283.1 RP1-267D11.6 chr12 120116907 120119000 + antisense NOVEL OTTHUMG00000187237.1 2094 2094 1 ENSG00000089154.9 GCN1L1 chr12 120127203 120194710 - protein_coding KNOWN OTTHUMG00000169338.2 67508 9654 84 ENSG00000266704.1 MIR4498 chr12 120155434 120155499 - miRNA KNOWN NA 66 66 1 ENSG00000263913.1 AC004812.1 chr12 120172039 120172126 - miRNA NOVEL NA 88 88 1 ENSG00000089157.14 RPLP0 chr12 120196686 120201235 - protein_coding KNOWN OTTHUMG00000169317.8 4550 4001 142 ENSG00000255857.4 PXN-AS1 chr12 120201291 120213138 + antisense NOVEL OTTHUMG00000169166.1 11848 2380 21 ENSG00000089159.14 PXN chr12 120210439 120265771 - protein_coding KNOWN OTTHUMG00000169169.7 55333 7376 130 ENSG00000275936.1 RP1-278C19.8 chr12 120224744 120225421 + antisense NOVEL OTTHUMG00000187240.1 678 678 1 ENSG00000143171.11 RXRG chr1 165400917 165445355 - protein_coding KNOWN OTTHUMG00000034626.4 44439 2696 28 ENSG00000240925.1 RPS20P31 chr12 120247460 120247791 + processed_pseudogene KNOWN OTTHUMG00000157789.1 332 332 1 ENSG00000123009.4 NME2P1 chr12 120282303 120282716 + processed_pseudogene KNOWN OTTHUMG00000168971.1 414 414 1 ENSG00000202538.1 RNU4-2 chr12 120291763 120291903 - snRNA KNOWN NA 141 141 1 ENSG00000200795.1 RNU4-1 chr12 120293097 120293237 - snRNA KNOWN NA 141 141 1 ENSG00000089163.4 SIRT4 chr12 120302316 120313249 + protein_coding KNOWN OTTHUMG00000169028.2 10934 1222 9 ENSG00000252659.1 RNU6-1088P chr12 120313238 120313341 - snRNA KNOWN NA 104 104 1 ENSG00000170890.12 PLA2G1B chr12 120322111 120327789 - protein_coding KNOWN OTTHUMG00000169343.1 5679 638 10 ENSG00000135097.5 MSI1 chr12 120341330 120369180 - protein_coding KNOWN OTTHUMG00000169344.1 27851 3090 29 ENSG00000239881.1 RPS27P25 chr12 120369440 120371688 + transcribed_processed_pseudogene KNOWN OTTHUMG00000157795.2 2249 498 4 ENSG00000256695.1 RP1-166H1.2 chr12 120389546 120395994 + lincRNA NOVEL OTTHUMG00000169024.1 6449 365 4 ENSG00000237463.4 RP11-280O1.2 chr1 165476841 165582155 - antisense NOVEL OTTHUMG00000034624.2 105315 4036 35 ENSG00000111775.2 COX6A1 chr12 120438090 120440742 + protein_coding KNOWN OTTHUMG00000047791.3 2653 1344 6 ENSG00000111780.8 AL021546.6 chr12 120438198 120460006 + protein_coding PUTATIVE OTTHUMG00000169346.1 21809 552 5 ENSG00000170855.3 TRIAP1 chr12 120443961 120446412 - protein_coding KNOWN OTTHUMG00000047787.3 2452 1442 4 ENSG00000257218.4 GATC chr12 120446438 120463749 + protein_coding KNOWN OTTHUMG00000047788.4 17312 4422 12 ENSG00000219355.2 RPL31P52 chr12 120450437 120450803 - processed_pseudogene KNOWN OTTHUMG00000047789.2 367 367 1 ENSG00000111786.7 SRSF9 chr12 120461668 120469793 - protein_coding KNOWN OTTHUMG00000047790.3 8126 3744 17 ENSG00000088986.9 DYNLL1 chr12 120469850 120498493 + protein_coding KNOWN OTTHUMG00000169368.2 28644 2957 31 ENSG00000248008.2 DYNLL1-AS1 chr12 120490328 120495940 - antisense NOVEL OTTHUMG00000169374.1 5613 1901 2 ENSG00000278344.1 RP11-18C24.8 chr12 120500735 120501090 - lincRNA NOVEL OTTHUMG00000187243.1 356 356 1 ENSG00000110871.13 COQ5 chr12 120503274 120534434 - protein_coding KNOWN OTTHUMG00000169375.4 31161 2523 35 ENSG00000230748.1 RP11-541H12.1 chr1 165497724 165498348 + processed_pseudogene KNOWN OTTHUMG00000034623.2 625 625 1 ENSG00000222601.1 Y_RNA chr12 120504571 120504659 - misc_RNA NOVEL NA 89 89 1 ENSG00000241030.1 RPL29P24 chr12 120522664 120523443 - processed_pseudogene KNOWN OTTHUMG00000157799.1 780 453 2 ENSG00000022840.14 RNF10 chr12 120533480 120577594 + protein_coding KNOWN OTTHUMG00000168999.15 44115 5911 134 ENSG00000167272.9 POP5 chr12 120578764 120581398 - protein_coding KNOWN OTTHUMG00000169023.2 2635 2173 29 ENSG00000242137.1 RPL11P5 chr12 120594015 120594548 - processed_pseudogene KNOWN OTTHUMG00000157800.1 534 534 1 ENSG00000256008.2 RP11-728G15.1 chr12 120629611 120641591 - antisense NOVEL OTTHUMG00000169186.2 11981 1119 4 ENSG00000157782.8 CABP1 chr12 120640552 120667324 + protein_coding KNOWN OTTHUMG00000156794.2 26773 5858 27 ENSG00000110917.6 MLEC chr12 120686869 120701864 + protein_coding KNOWN OTTHUMG00000169187.3 14996 6723 17 ENSG00000256364.1 RP11-173P15.3 chr12 120697124 120699541 - antisense NOVEL OTTHUMG00000169200.1 2418 907 4 ENSG00000277423.1 RP11-173P15.9 chr12 120703867 120704282 + lincRNA NOVEL OTTHUMG00000187244.1 416 416 1 ENSG00000162763.3 LRRC52 chr1 165544007 165563961 + protein_coding KNOWN OTTHUMG00000034625.1 19955 1369 2 ENSG00000276188.1 RP11-173P15.10 chr12 120709112 120709523 + lincRNA NOVEL OTTHUMG00000187246.1 412 412 1 ENSG00000175970.8 UNC119B chr12 120710435 120723640 + protein_coding KNOWN OTTHUMG00000169201.2 13206 5195 10 ENSG00000256569.1 RP11-173P15.5 chr12 120721507 120723639 - antisense NOVEL OTTHUMG00000169202.1 2133 569 2 ENSG00000265455.1 MIR4700 chr12 120723193 120723266 + miRNA KNOWN NA 74 74 1 ENSG00000122971.7 ACADS chr12 120725735 120740008 + protein_coding KNOWN OTTHUMG00000169203.1 14274 2648 23 ENSG00000255946.1 RP11-173P15.7 chr12 120740470 120761592 - antisense NOVEL OTTHUMG00000169204.1 21123 583 3 ENSG00000157837.14 SPPL3 chr12 120762510 120904371 - protein_coding KNOWN OTTHUMG00000169232.5 141862 6672 54 ENSG00000213137.3 ARF1P2 chr12 120845110 120845647 - processed_pseudogene KNOWN OTTHUMG00000169223.1 538 538 1 ENSG00000231313.2 CLIC1P1 chr12 120914400 120915123 + processed_pseudogene KNOWN OTTHUMG00000169145.1 724 724 1 ENSG00000244585.1 RPL12P33 chr12 120916745 120917236 + processed_pseudogene KNOWN OTTHUMG00000169146.1 492 492 1 ENSG00000237783.2 RP11-306I1.1 chr1 165581613 165582476 + processed_pseudogene KNOWN OTTHUMG00000034565.2 864 864 1 ENSG00000241388.4 HNF1A-AS1 chr12 120941728 120980965 - processed_transcript KNOWN OTTHUMG00000185474.2 39238 3859 11 ENSG00000135100.16 HNF1A chr12 120978543 121002512 + protein_coding KNOWN OTTHUMG00000151015.8 23970 5028 104 ENSG00000157895.10 C12orf43 chr12 121000486 121016502 - protein_coding KNOWN OTTHUMG00000169150.5 16017 6140 49 ENSG00000135114.11 OASL chr12 121019111 121039242 - protein_coding KNOWN OTTHUMG00000154981.4 20132 3517 18 ENSG00000256963.1 RP11-216P16.4 chr12 121079842 121080124 + processed_pseudogene KNOWN OTTHUMG00000169151.1 283 283 1 ENSG00000279001.1 RP11-216P16.5 chr12 121096027 121096429 - TEC KNOWN OTTHUMG00000169152.1 403 403 1 ENSG00000201945.1 SNORA70 chr12 121107043 121107174 + snoRNA NOVEL NA 132 132 1 ENSG00000223538.2 RP11-216P16.6 chr12 121107220 121107490 + processed_pseudogene KNOWN OTTHUMG00000157802.2 271 271 1 ENSG00000089041.15 P2RX7 chr12 121132819 121188032 + protein_coding KNOWN OTTHUMG00000169153.5 55214 5546 139 ENSG00000257053.1 Z98941.1 chr12 121149010 121149109 + processed_pseudogene KNOWN OTTHUMG00000169154.1 100 100 1 ENSG00000236206.1 RP11-306I1.2 chr1 165598463 165623331 + lincRNA NOVEL OTTHUMG00000034564.1 24869 492 4 ENSG00000274029.1 RP11-340F14.6 chr12 121190868 121191518 + lincRNA NOVEL OTTHUMG00000187263.1 651 651 1 ENSG00000135124.13 P2RX4 chr12 121209857 121234106 + protein_coding KNOWN OTTHUMG00000169155.1 24250 8159 123 ENSG00000110931.17 CAMKK2 chr12 121237691 121298308 - protein_coding KNOWN OTTHUMG00000169156.3 60618 6931 192 ENSG00000089053.11 ANAPC5 chr12 121308245 121399896 - protein_coding KNOWN OTTHUMG00000169157.2 91652 12304 168 ENSG00000258435.1 RP11-711D18.2 chr12 121391962 121399859 + lincRNA NOVEL OTTHUMG00000171523.1 7898 552 2 ENSG00000170633.15 RNF34 chr12 121400041 121430623 + protein_coding KNOWN OTTHUMG00000171524.2 30583 4719 46 ENSG00000089094.15 KDM2B chr12 121429097 121581015 - protein_coding KNOWN OTTHUMG00000169071.3 151919 13623 187 ENSG00000277819.1 MIR7107 chr12 121444273 121444352 - miRNA KNOWN NA 80 80 1 ENSG00000256742.1 RP13-941N14.1 chr12 121580792 121593504 + lincRNA NOVEL OTTHUMG00000169072.1 12713 544 2 ENSG00000252393.1 RNU6-1004P chr12 121604902 121605012 + snRNA KNOWN NA 111 111 1 ENSG00000143198.11 MGST3 chr1 165630861 165661796 + protein_coding KNOWN OTTHUMG00000034627.6 30936 8401 61 ENSG00000276045.1 ORAI1 chr12 121626550 121642677 + protein_coding KNOWN OTTHUMG00000169073.3 16128 2262 7 ENSG00000139714.11 MORN3 chr12 121648742 121672631 - protein_coding KNOWN OTTHUMG00000169075.2 23890 3856 17 ENSG00000188735.11 TMEM120B chr12 121712752 121783001 + protein_coding KNOWN OTTHUMG00000169076.1 70250 8449 52 ENSG00000139725.6 RHOF chr12 121777754 121803403 - protein_coding KNOWN OTTHUMG00000169077.4 25650 6181 32 ENSG00000212694.7 LINC01089 chr12 121795267 121803906 - lincRNA NOVEL OTTHUMG00000128905.2 8640 4132 49 ENSG00000272849.1 RP11-347I19.8 chr12 121797511 121801972 + lincRNA NOVEL OTTHUMG00000185860.1 4462 572 2 ENSG00000274292.1 RP11-347I19.7 chr12 121800797 121803403 + lincRNA NOVEL OTTHUMG00000169079.2 2607 2607 1 ENSG00000139718.9 SETD1B chr12 121804180 121832584 + protein_coding KNOWN OTTHUMG00000169080.2 28405 8314 68 ENSG00000158104.10 HPD chr12 121839527 121863596 - protein_coding KNOWN OTTHUMG00000169081.2 24070 2232 44 ENSG00000256811.1 RP11-7M8.2 chr12 121856259 121857059 + antisense NOVEL OTTHUMG00000169082.1 801 434 3 ENSG00000253086.1 RNU6-537P chr1 11152350 11152452 + snRNA KNOWN NA 103 103 1 ENSG00000143149.11 ALDH9A1 chr1 165662216 165698863 - protein_coding KNOWN OTTHUMG00000034677.2 36648 3308 25 ENSG00000278084.1 RP11-87C12.6 chr12 121874193 121874337 + lincRNA NOVEL OTTHUMG00000187268.1 145 145 1 ENSG00000110801.12 PSMD9 chr12 121888731 121918297 + protein_coding KNOWN OTTHUMG00000168945.3 29567 8774 51 ENSG00000256950.2 RP11-87C12.2 chr12 121888809 121921470 + protein_coding NOVEL OTTHUMG00000168946.2 32662 1831 6 ENSG00000239082.1 RNU7-170P chr12 121908103 121908163 + snRNA KNOWN NA 61 61 1 ENSG00000158023.8 WDR66 chr12 121917862 122003927 + protein_coding KNOWN OTTHUMG00000168948.1 86066 16115 65 ENSG00000255856.2 RP11-87C12.5 chr12 122007434 122020063 - lincRNA NOVEL OTTHUMG00000168950.2 12630 1143 3 ENSG00000110987.7 BCL7A chr12 122019422 122062044 + protein_coding KNOWN OTTHUMG00000168951.2 42623 6565 16 ENSG00000256546.1 AC156455.1 chr12 122063306 122068616 + processed_transcript KNOWN OTTHUMG00000168952.1 5311 1831 11 ENSG00000175727.12 MLXIP chr12 122078722 122147347 + protein_coding KNOWN OTTHUMG00000168953.3 68626 13905 61 ENSG00000158113.11 LRRC43 chr12 122167738 122203471 + protein_coding KNOWN OTTHUMG00000168915.1 35734 2775 33 ENSG00000206990.1 Y_RNA chr1 165662585 165662687 - misc_RNA NOVEL NA 103 103 1 ENSG00000204671.1 IL31 chr12 122172030 122174199 - protein_coding KNOWN OTTHUMG00000168916.1 2170 904 3 ENSG00000176383.8 B3GNT4 chr12 122203543 122208952 + protein_coding KNOWN OTTHUMG00000168917.1 5410 4690 14 ENSG00000184047.14 DIABLO chr12 122207662 122227534 - protein_coding KNOWN OTTHUMG00000157014.3 19873 5967 75 ENSG00000256861.1 RP11-512M8.5 chr12 122207779 122266423 - protein_coding KNOWN OTTHUMG00000168918.1 58645 2748 16 ENSG00000139719.8 VPS33A chr12 122229564 122266521 - protein_coding KNOWN OTTHUMG00000168920.2 36958 7542 56 ENSG00000280389.1 RP11-512M8.11 chr12 122255119 122260274 - TEC KNOWN OTTHUMG00000184192.1 5156 684 2 ENSG00000130779.18 CLIP1 chr12 122271432 122422632 - protein_coding KNOWN OTTHUMG00000168922.2 151201 16293 227 ENSG00000256304.1 CCDC150P1 chr12 122322122 122324336 - processed_pseudogene KNOWN OTTHUMG00000168923.1 2215 2215 1 ENSG00000214760.2 RPL21P1 chr12 122364780 122365629 + processed_pseudogene KNOWN OTTHUMG00000168926.1 850 507 2 ENSG00000257097.1 CLIP1-AS1 chr12 122395542 122400857 + lincRNA NOVEL OTTHUMG00000168927.1 5316 1809 5 ENSG00000230175.1 RP11-466F5.3 chr1 165671256 165671725 + processed_pseudogene KNOWN OTTHUMG00000034673.1 470 470 1 ENSG00000033030.12 ZCCHC8 chr12 122471600 122500595 - protein_coding KNOWN OTTHUMG00000168878.2 28996 8690 60 ENSG00000252192.1 SNORA9 chr12 122492113 122492241 - snoRNA NOVEL NA 129 129 1 ENSG00000275265.1 RP11-15J22.8 chr12 122501187 122501641 + lincRNA NOVEL OTTHUMG00000187270.1 455 455 1 ENSG00000111011.16 RSRC2 chr12 122503458 122527000 - protein_coding KNOWN OTTHUMG00000167572.5 23543 8741 121 ENSG00000184445.10 KNTC1 chr12 122527246 122626396 + protein_coding KNOWN OTTHUMG00000168861.5 99151 11325 174 ENSG00000255972.1 RP11-324E6.8 chr12 122563735 122563762 - processed_pseudogene KNOWN OTTHUMG00000168883.1 28 28 1 ENSG00000274191.1 RP11-324E6.10 chr12 122634130 122634673 + lincRNA NOVEL OTTHUMG00000187273.2 544 544 1 ENSG00000256249.1 RP11-324E6.6 chr12 122687125 122715979 + lincRNA NOVEL OTTHUMG00000168862.1 28855 2090 5 ENSG00000182782.7 HCAR2 chr12 122701293 122703343 - protein_coding KNOWN OTTHUMG00000162722.1 2051 2051 1 ENSG00000255398.2 HCAR3 chr12 122714756 122716892 - protein_coding KNOWN OTTHUMG00000166034.2 2137 2137 1 ENSG00000225272.2 RP11-466F5.4 chr1 165676310 165676781 + processed_pseudogene KNOWN OTTHUMG00000034674.2 472 472 1 ENSG00000196917.5 HCAR1 chr12 122726076 122730843 - protein_coding KNOWN OTTHUMG00000168863.2 4768 4768 1 ENSG00000256044.1 RP11-324E6.4 chr12 122749481 122749586 - processed_pseudogene KNOWN OTTHUMG00000168864.1 106 106 1 ENSG00000139726.9 DENR chr12 122752774 122771064 + protein_coding KNOWN OTTHUMG00000168844.1 18291 3576 22 ENSG00000206914.1 Y_RNA chr12 122768099 122768200 + misc_RNA NOVEL NA 102 102 1 ENSG00000130783.12 CCDC62 chr12 122774327 122827528 + protein_coding KNOWN OTTHUMG00000168764.3 53202 4479 58 ENSG00000130787.12 HIP1R chr12 122834453 122862960 + protein_coding KNOWN OTTHUMG00000168765.1 28508 7102 107 ENSG00000139722.5 VPS37B chr12 122865328 122896444 - protein_coding KNOWN OTTHUMG00000168767.3 31117 5953 14 ENSG00000256152.2 RP11-463O12.3 chr12 122865335 122867021 + lincRNA NOVEL OTTHUMG00000168766.2 1687 484 2 ENSG00000280138.1 RP11-463O12.5 chr12 122870059 122888720 - TEC KNOWN OTTHUMG00000168768.1 18662 18662 1 ENSG00000150967.16 ABCB9 chr12 122920951 122981649 - protein_coding KNOWN OTTHUMG00000168769.4 60699 13291 159 ENSG00000215838.4 RP11-466F5.6 chr1 165698750 165709968 + transcribed_processed_pseudogene KNOWN OTTHUMG00000034676.2 11219 1854 6 ENSG00000111325.15 OGFOD2 chr12 122974580 122980043 + protein_coding KNOWN OTTHUMG00000168778.1 5464 4608 145 ENSG00000256028.2 RP11-197N18.2 chr12 122975320 122982907 + processed_transcript NOVEL OTTHUMG00000168770.1 7588 5618 7 ENSG00000182196.12 ARL6IP4 chr12 122980060 122982913 + protein_coding KNOWN OTTHUMG00000168779.3 2854 2781 98 ENSG00000090975.11 PITPNM2 chr12 122983480 123150015 - protein_coding KNOWN OTTHUMG00000168845.2 166536 9161 107 ENSG00000265526.1 MIR4304 chr12 123010667 123010728 - miRNA KNOWN NA 62 62 1 ENSG00000251497.2 RP11-197N18.7 chr12 123081384 123084744 + lincRNA NOVEL OTTHUMG00000168847.1 3361 2289 5 ENSG00000280381.1 RP11-197N18.8 chr12 123087256 123092821 - TEC KNOWN OTTHUMG00000168848.1 5566 5566 1 ENSG00000051825.13 MPHOSPH9 chr12 123152320 123244014 - protein_coding KNOWN OTTHUMG00000168849.7 91695 10304 178 ENSG00000280120.1 RP11-546D6.3 chr12 123152324 123153377 - TEC KNOWN OTTHUMG00000168850.1 1054 1054 1 ENSG00000130921.6 C12orf65 chr12 123232916 123257959 + protein_coding KNOWN OTTHUMG00000168852.1 25044 7090 22 ENSG00000273365.1 RP11-466F5.10 chr1 165706556 165707284 - lincRNA NOVEL OTTHUMG00000186434.1 729 729 1 ENSG00000235423.7 RP11-282O18.3 chr12 123252030 123261483 - antisense NOVEL OTTHUMG00000168853.3 9454 1756 14 ENSG00000111328.5 CDK2AP1 chr12 123260971 123272334 - protein_coding KNOWN OTTHUMG00000168854.1 11364 3117 26 ENSG00000269980.1 RP11-282O18.7 chr12 123262060 123262402 + antisense NOVEL OTTHUMG00000183986.1 343 343 1 ENSG00000199845.1 RNA5SP375 chr12 123282916 123283034 - rRNA KNOWN NA 119 119 1 ENSG00000139697.10 SBNO1 chr12 123289109 123364843 - protein_coding KNOWN OTTHUMG00000183988.2 75735 11124 95 ENSG00000207189.1 Y_RNA chr12 123348999 123349100 - misc_RNA NOVEL NA 102 102 1 ENSG00000256092.2 RP13-942N8.1 chr12 123363868 123366113 + lincRNA NOVEL OTTHUMG00000168679.2 2246 2246 3 ENSG00000277700.1 MIR8072 chr12 123364764 123364843 - miRNA KNOWN NA 80 80 1 ENSG00000183955.11 SETD8 chr12 123383773 123409358 + protein_coding KNOWN OTTHUMG00000150477.2 25586 4579 50 ENSG00000150977.10 RILPL2 chr12 123410683 123436717 - protein_coding KNOWN OTTHUMG00000187294.1 26035 6141 4 ENSG00000143183.15 TMCO1 chr1 165724293 165827755 - protein_coding KNOWN OTTHUMG00000034672.3 103463 5584 60 ENSG00000270445.1 RP11-972P1.8 chr12 123441517 123441852 - processed_pseudogene KNOWN OTTHUMG00000184772.1 336 336 1 ENSG00000184209.14 SNRNP35 chr12 123457641 123473154 + protein_coding KNOWN OTTHUMG00000167584.3 15514 5140 12 ENSG00000188026.10 RILPL1 chr12 123470054 123533718 - protein_coding KNOWN OTTHUMG00000168686.2 63665 5259 17 ENSG00000280328.1 RP11-972P1.7 chr12 123472200 123476093 - TEC KNOWN OTTHUMG00000168687.1 3894 3894 1 ENSG00000274427.1 RP11-972P1.10 chr12 123515275 123515513 - sense_intronic NOVEL OTTHUMG00000187295.1 239 239 1 ENSG00000278112.1 RP11-972P1.11 chr12 123519390 123519856 - sense_intronic NOVEL OTTHUMG00000187296.1 467 467 1 ENSG00000266655.1 MIR3908 chr12 123536409 123536534 + miRNA KNOWN NA 126 126 1 ENSG00000247373.3 RP11-486O12.2 chr12 123575891 123585115 - lincRNA NOVEL OTTHUMG00000168693.2 9225 8279 3 ENSG00000086598.9 TMED2 chr12 123584531 123598577 + protein_coding KNOWN OTTHUMG00000168694.2 14047 3830 17 ENSG00000111364.14 DDX55 chr12 123602077 123620941 + protein_coding KNOWN OTTHUMG00000168695.2 18865 5714 95 ENSG00000224358.1 RP11-466F5.8 chr1 165768929 165775176 + antisense NOVEL OTTHUMG00000034703.1 6248 2150 2 ENSG00000206897.1 SNORA9 chr12 123616708 123616840 + snoRNA NOVEL NA 133 133 1 ENSG00000111361.11 EIF2B1 chr12 123620406 123633766 - protein_coding KNOWN OTTHUMG00000168696.1 13361 3627 35 ENSG00000111358.12 GTF2H3 chr12 123633739 123662606 + protein_coding KNOWN OTTHUMG00000168697.2 28868 3996 124 ENSG00000279953.1 RP11-338K17.5 chr12 123649068 123650485 + TEC KNOWN OTTHUMG00000168698.1 1418 1418 1 ENSG00000278861.1 RP11-338K17.6 chr12 123655528 123656128 + TEC KNOWN OTTHUMG00000168699.1 601 601 1 ENSG00000168778.10 TCTN2 chr12 123671113 123708403 + protein_coding KNOWN OTTHUMG00000168700.3 37291 5106 46 ENSG00000255839.1 RP11-338K17.8 chr12 123707602 123708386 - lincRNA NOVEL OTTHUMG00000168722.1 785 321 2 ENSG00000185344.12 ATP6V0A2 chr12 123712318 123761755 + protein_coding KNOWN OTTHUMG00000168723.2 49438 13729 71 ENSG00000239215.1 RPL27P12 chr12 123721246 123721639 - processed_pseudogene KNOWN OTTHUMG00000157804.1 394 394 1 ENSG00000280300.1 RP11-338K17.10 chr12 123754246 123754794 - TEC KNOWN OTTHUMG00000168724.1 549 549 1 ENSG00000230659.3 RP11-466F5.9 chr1 165819353 165819787 + processed_pseudogene KNOWN OTTHUMG00000034704.1 435 435 1 ENSG00000197653.13 DNAH10 chr12 123762188 123936206 + protein_coding KNOWN OTTHUMG00000154477.5 174019 16720 171 ENSG00000119242.7 CCDC92 chr12 123918660 123972831 - protein_coding KNOWN OTTHUMG00000168725.5 54172 8223 40 ENSG00000270028.1 RP11-380L11.4 chr12 123925461 123926083 - antisense NOVEL OTTHUMG00000184056.1 623 623 1 ENSG00000250091.2 DNAH10OS chr12 123926424 123934984 - protein_coding KNOWN OTTHUMG00000162010.4 8561 5040 2 ENSG00000270130.1 RP11-214K3.23 chr12 123960717 123961244 - sense_intronic NOVEL OTTHUMG00000184034.1 528 528 1 ENSG00000270048.1 RP11-214K3.22 chr12 123962555 123962817 - sense_intronic NOVEL OTTHUMG00000184035.1 263 263 1 ENSG00000269997.1 RP11-214K3.21 chr12 123966077 123966629 - sense_intronic NOVEL OTTHUMG00000184036.1 553 553 1 ENSG00000269938.1 RP11-214K3.20 chr12 123968023 123968579 - sense_intronic NOVEL OTTHUMG00000184037.1 557 557 1 ENSG00000270061.1 RP11-214K3.19 chr12 123969990 123970344 - sense_intronic NOVEL OTTHUMG00000184038.1 355 355 1 ENSG00000270095.1 RP11-214K3.18 chr12 123971457 123971714 - sense_intronic NOVEL OTTHUMG00000184039.1 258 258 1 ENSG00000143179.11 UCK2 chr1 165827531 165911618 + protein_coding KNOWN OTTHUMG00000040117.2 84088 6756 36 ENSG00000179195.14 ZNF664 chr12 123971845 124015439 + protein_coding KNOWN OTTHUMG00000168596.2 43595 6340 57 ENSG00000178882.12 FAM101A chr12 123973215 124316024 + protein_coding KNOWN OTTHUMG00000168609.2 342810 2902 22 ENSG00000274874.1 RP11-214K3.25 chr12 123973944 124088594 + protein_coding NOVEL OTTHUMG00000188242.1 114651 504 3 ENSG00000256827.1 RP11-214K3.5 chr12 124005871 124006225 - processed_pseudogene KNOWN OTTHUMG00000168599.1 355 355 1 ENSG00000275389.1 RP11-214K3.24 chr12 124085761 124088598 + lincRNA NOVEL OTTHUMG00000188243.1 2838 2838 1 ENSG00000256596.1 RP11-522N14.2 chr12 124206228 124209018 + lincRNA NOVEL OTTHUMG00000168607.1 2791 2256 2 ENSG00000196498.12 NCOR2 chr12 124324415 124567589 - protein_coding KNOWN OTTHUMG00000150455.2 243175 13975 323 ENSG00000275967.1 MIR6880 chr12 124337181 124337242 - miRNA KNOWN NA 62 62 1 ENSG00000255965.1 RP11-408I18.9 chr12 124383381 124383510 + processed_pseudogene KNOWN OTTHUMG00000168614.1 130 130 1 ENSG00000214650.2 RP11-83B20.1 chr12 124513222 124514813 + lincRNA NOVEL OTTHUMG00000168623.1 1592 1282 2 ENSG00000171819.4 ANGPTL7 chr1 11189341 11195981 + protein_coding KNOWN OTTHUMG00000002002.3 6641 2238 8 ENSG00000236364.3 RP11-525G13.2 chr1 165890795 165900683 - antisense NOVEL OTTHUMG00000040116.3 9889 1570 5 ENSG00000279527.1 RP11-83B20.2 chr12 124529722 124530228 - TEC KNOWN OTTHUMG00000168624.1 507 507 1 ENSG00000279071.1 RP11-83B20.3 chr12 124537844 124539677 + TEC KNOWN OTTHUMG00000168625.1 1834 1834 1 ENSG00000280354.1 RP11-83B20.4 chr12 124542503 124542873 + TEC KNOWN OTTHUMG00000168626.1 371 371 1 ENSG00000279121.1 RP11-83B20.5 chr12 124555905 124556432 + TEC KNOWN OTTHUMG00000168627.1 528 528 1 ENSG00000279334.1 RP11-83B20.6 chr12 124561869 124562283 + TEC KNOWN OTTHUMG00000168628.1 415 415 1 ENSG00000280097.1 RP11-83B20.7 chr12 124593181 124593691 - TEC KNOWN OTTHUMG00000168629.1 511 511 1 ENSG00000278973.1 RP11-83B20.9 chr12 124622290 124623069 - TEC KNOWN OTTHUMG00000168630.1 780 780 1 ENSG00000280444.1 RP11-83B20.8 chr12 124623391 124623987 + TEC KNOWN OTTHUMG00000168631.1 597 597 1 ENSG00000279087.1 RP11-83B20.10 chr12 124637999 124638444 - TEC KNOWN OTTHUMG00000168632.1 446 446 1 ENSG00000279931.1 RP11-13J12.2 chr12 124725524 124725934 + TEC KNOWN OTTHUMG00000168543.1 411 411 1 ENSG00000271527.1 RP11-7G12.2 chr1 165941235 165941769 - processed_pseudogene KNOWN OTTHUMG00000184426.1 535 535 1 ENSG00000073060.14 SCARB1 chr12 124776856 124882668 - protein_coding KNOWN OTTHUMG00000168544.2 105813 7741 97 ENSG00000252008.1 RNU6-927P chr12 124901512 124901611 + snRNA KNOWN NA 100 100 1 ENSG00000150991.13 UBC chr12 124911604 124917368 - protein_coding KNOWN OTTHUMG00000044421.3 5765 3898 32 ENSG00000265345.1 MIR5188 chr12 124915547 124915659 + miRNA KNOWN NA 113 113 1 ENSG00000241129.3 RPL22P19 chr12 124935455 124935895 - transcribed_processed_pseudogene KNOWN OTTHUMG00000157813.4 441 441 2 ENSG00000150990.6 DHX37 chr12 124946825 124989122 - protein_coding KNOWN OTTHUMG00000168547.1 42298 6618 89 ENSG00000184992.10 BRI3BP chr12 124993700 125031231 + protein_coding KNOWN OTTHUMG00000168548.2 37532 6648 3 ENSG00000280634.1 THRIL chr12 125025434 125027410 - antisense KNOWN OTTHUMG00000189748.1 1977 1977 1 ENSG00000256093.1 RP11-158L12.2 chr12 125056359 125056581 - processed_pseudogene KNOWN OTTHUMG00000168549.1 223 223 1 ENSG00000081760.15 AACS chr12 125065379 125143333 + protein_coding KNOWN OTTHUMG00000168550.3 77955 16094 84 ENSG00000226292.1 RP11-7G12.1 chr1 166022215 166023027 + processed_pseudogene KNOWN OTTHUMG00000034701.1 813 813 1 ENSG00000279233.1 RP11-158L12.4 chr12 125138245 125141711 + TEC KNOWN OTTHUMG00000168551.1 3467 3467 1 ENSG00000256814.1 RP11-158L12.5 chr12 125150058 125151394 + lincRNA NOVEL OTTHUMG00000168552.1 1337 585 2 ENSG00000280117.1 RP11-158L12.6 chr12 125160525 125164918 + TEC KNOWN OTTHUMG00000168553.1 4394 4394 1 ENSG00000139364.9 TMEM132B chr12 125186836 125662377 + protein_coding KNOWN OTTHUMG00000168520.2 475542 15703 28 ENSG00000279462.1 RP11-604N13.1 chr12 125300936 125301917 + TEC KNOWN OTTHUMG00000168521.1 982 982 1 ENSG00000280125.1 RP4-800O15.1 chr12 125808668 125809808 + TEC KNOWN OTTHUMG00000168490.1 1141 1141 1 ENSG00000280415.1 RP4-800O15.2 chr12 125858862 125861119 + TEC KNOWN OTTHUMG00000168491.1 2258 2258 1 ENSG00000271184.1 RP4-800O15.3 chr12 125900421 125901483 - processed_pseudogene KNOWN OTTHUMG00000184771.1 1063 1063 1 ENSG00000249267.5 LINC00939 chr12 125958688 125983374 - lincRNA NOVEL OTTHUMG00000168492.1 24687 6471 18 ENSG00000256276.1 RP5-916L7.2 chr12 125983702 125986234 + lincRNA NOVEL OTTHUMG00000168493.1 2533 570 3 ENSG00000207341.1 RNA5SP64 chr1 166042244 166042350 + rRNA KNOWN NA 107 107 1 ENSG00000275212.1 RP3-446N13.5 chr12 126032995 126043485 + lincRNA NOVEL OTTHUMG00000187300.1 10491 677 3 ENSG00000256342.1 RP3-446N13.1 chr12 126095992 126103935 + lincRNA NOVEL OTTHUMG00000168496.1 7944 643 5 ENSG00000280364.1 RP3-446N13.2 chr12 126106459 126107047 - TEC KNOWN OTTHUMG00000168497.1 589 589 1 ENSG00000280398.1 RP3-446N13.3 chr12 126130166 126130865 - TEC KNOWN OTTHUMG00000168498.1 700 700 1 ENSG00000280272.1 RP3-446N13.4 chr12 126141952 126142377 + TEC KNOWN OTTHUMG00000168499.1 426 426 1 ENSG00000256763.1 RP1-116K23.1 chr12 126168235 126171666 + lincRNA NOVEL OTTHUMG00000168500.1 3432 637 4 ENSG00000255778.1 RP4-765H13.1 chr12 126191378 126225314 + lincRNA NOVEL OTTHUMG00000168501.1 33937 280 2 ENSG00000257061.1 RP4-809F18.2 chr12 126358034 126358896 + lincRNA NOVEL OTTHUMG00000168465.1 863 775 2 ENSG00000255595.1 RP4-809F18.1 chr12 126359302 126361065 + lincRNA NOVEL OTTHUMG00000168466.1 1764 1310 2 ENSG00000256494.1 RP5-944M2.1 chr12 126400792 126405528 - lincRNA NOVEL OTTHUMG00000168467.1 4737 974 2 ENSG00000188859.6 FAM78B chr1 166057426 166166969 - protein_coding KNOWN OTTHUMG00000034705.4 109544 5343 14 ENSG00000256927.1 RP5-944M2.2 chr12 126425990 126434008 + lincRNA NOVEL OTTHUMG00000168468.1 8019 480 3 ENSG00000214043.6 RP5-944M2.3 chr12 126442481 126472790 + lincRNA NOVEL OTTHUMG00000168469.1 30310 2835 46 ENSG00000256125.1 RP5-944M2.4 chr12 126458462 126458792 - processed_pseudogene KNOWN OTTHUMG00000168470.1 331 331 1 ENSG00000255853.1 RP11-407A16.1 chr12 126510910 126511711 - processed_pseudogene KNOWN OTTHUMG00000168471.1 802 802 1 ENSG00000256310.1 NDUFA5P6 chr12 126524248 126524626 + processed_pseudogene KNOWN OTTHUMG00000168472.1 379 379 1 ENSG00000256732.1 RP11-407A16.3 chr12 126610034 126690318 - lincRNA NOVEL OTTHUMG00000168473.1 80285 1192 9 ENSG00000255900.1 RP11-407A16.8 chr12 126616344 126616554 - processed_pseudogene KNOWN OTTHUMG00000168474.1 211 211 1 ENSG00000255944.1 RP11-407A16.4 chr12 126628172 126690322 - lincRNA NOVEL OTTHUMG00000168475.1 62151 419 3 ENSG00000278866.1 RP11-407A16.6 chr12 126675895 126676243 - TEC KNOWN OTTHUMG00000168476.1 349 349 1 ENSG00000279171.1 RP11-407A16.5 chr12 126677262 126677806 + TEC KNOWN OTTHUMG00000168477.1 545 545 1 ENSG00000203307.2 RP11-375H19.2 chr1 166081183 166087483 + antisense NOVEL OTTHUMG00000156135.1 6301 594 3 ENSG00000255998.1 RP11-407A16.7 chr12 126690479 126695832 + lincRNA NOVEL OTTHUMG00000168478.1 5354 655 5 ENSG00000189238.5 LINC00943 chr12 126726270 126746252 + lincRNA NOVEL OTTHUMG00000168479.1 19983 3893 21 ENSG00000256128.4 LINC00944 chr12 126729787 126772411 - lincRNA NOVEL OTTHUMG00000168480.1 42625 1853 19 ENSG00000255923.1 RP11-983C2.1 chr12 126864465 126865422 + processed_pseudogene KNOWN OTTHUMG00000168452.1 958 958 1 ENSG00000249873.5 RP11-983C2.2 chr12 126869490 126874690 - lincRNA NOVEL OTTHUMG00000168453.1 5201 1486 9 ENSG00000256286.1 RP11-983C2.3 chr12 126874821 126876232 + lincRNA NOVEL OTTHUMG00000168454.1 1412 286 2 ENSG00000257021.1 HSPE1P20 chr12 126912034 126912322 + processed_pseudogene KNOWN OTTHUMG00000168455.1 289 289 1 ENSG00000249345.5 RP11-575F12.1 chr12 126915203 127060401 - lincRNA NOVEL OTTHUMG00000168456.3 145199 1465 14 ENSG00000256001.1 RP11-575F12.2 chr12 127145072 127146532 - lincRNA NOVEL OTTHUMG00000168461.1 1461 616 5 ENSG00000278266.1 RP11-575F12.3 chr12 127147149 127150081 + lincRNA NOVEL OTTHUMG00000168462.2 2933 2933 1 ENSG00000230898.1 RP11-9L18.3 chr1 166147782 166165095 - sense_intronic NOVEL OTTHUMG00000156136.1 17314 484 2 ENSG00000239776.2 AC079949.1 chr12 127166071 127166127 - miRNA NOVEL NA 57 57 1 ENSG00000256292.1 RP11-955H22.1 chr12 127274467 127284283 - lincRNA NOVEL OTTHUMG00000168443.1 9817 724 4 ENSG00000256496.1 RP11-955H22.4 chr12 127317709 127319986 - unprocessed_pseudogene KNOWN OTTHUMG00000168444.1 2278 912 4 ENSG00000253089.1 RNU1-104P chr12 127321355 127321529 + snRNA KNOWN NA 175 175 1 ENSG00000256362.1 RP11-955H22.3 chr12 127324155 127340072 - lincRNA NOVEL OTTHUMG00000168445.1 15918 852 3 ENSG00000256502.1 RP11-955H22.2 chr12 127344258 127344402 - processed_pseudogene KNOWN OTTHUMG00000168446.1 145 145 1 ENSG00000280024.1 RP11-367G12.1 chr12 127372243 127372669 + TEC KNOWN OTTHUMG00000168447.1 427 427 1 ENSG00000279952.1 RP11-483I24.1 chr12 127462507 127463197 + TEC KNOWN OTTHUMG00000168448.1 691 691 1 ENSG00000255945.1 RP11-351O2.1 chr12 127598168 127599715 + lincRNA NOVEL OTTHUMG00000168449.1 1548 556 2 ENSG00000199584.1 Y_RNA chr12 127619336 127619447 - misc_RNA NOVEL NA 112 112 1 ENSG00000215952.1 MIR921 chr1 166154743 166154798 - miRNA KNOWN NA 56 56 1 ENSG00000257035.1 RP11-351O2.2 chr12 127624153 127626267 + unprocessed_pseudogene KNOWN OTTHUMG00000168450.1 2115 502 3 ENSG00000256022.4 RP11-526P6.1 chr12 127631248 127636467 - lincRNA NOVEL OTTHUMG00000168451.1 5220 1418 10 ENSG00000256922.1 RP11-749H20.1 chr12 127793527 127821183 - lincRNA NOVEL OTTHUMG00000168421.1 27657 462 3 ENSG00000279475.1 RP11-749H20.2 chr12 127825938 127826286 - TEC KNOWN OTTHUMG00000168422.1 349 349 1 ENSG00000255757.1 RP11-749H20.3 chr12 127876999 127877516 - processed_pseudogene KNOWN OTTHUMG00000168423.1 518 518 1 ENSG00000256597.2 FLJ37505 chr12 127881617 127898639 + lincRNA NOVEL OTTHUMG00000168424.2 17023 2311 6 ENSG00000256193.4 LINC00507 chr12 127915372 127951552 + lincRNA NOVEL OTTHUMG00000168425.1 36181 2167 11 ENSG00000256971.1 LINC00508 chr12 127940595 127950160 - lincRNA NOVEL OTTHUMG00000168426.1 9566 194 2 ENSG00000256643.1 RP11-349K16.1 chr12 128023788 128027166 - lincRNA NOVEL OTTHUMG00000168427.1 3379 552 3 ENSG00000256551.1 RP13-653N12.1 chr12 128086985 128118132 - lincRNA NOVEL OTTHUMG00000168428.1 31148 996 7 ENSG00000215835.2 RP11-9L18.2 chr1 166275629 166277597 - processed_pseudogene KNOWN OTTHUMG00000034702.1 1969 1969 1 ENSG00000256659.1 RP13-653N12.2 chr12 128118217 128121952 + lincRNA NOVEL OTTHUMG00000168429.1 3736 1656 3 ENSG00000276487.1 RP11-417O18.2 chr12 128187934 128191389 - lincRNA NOVEL OTTHUMG00000187327.1 3456 622 4 ENSG00000265061.1 MIR4419B chr12 128244506 128244573 + miRNA KNOWN NA 68 68 1 ENSG00000181234.9 TMEM132C chr12 128267403 128707915 + protein_coding KNOWN OTTHUMG00000163736.4 440513 4947 9 ENSG00000279180.1 RP11-417O18.1 chr12 128288159 128289056 + TEC KNOWN OTTHUMG00000168412.1 898 898 1 ENSG00000265635.1 MIR3612 chr12 128294092 128294178 + miRNA KNOWN NA 87 87 1 ENSG00000257025.1 RP11-553N19.1 chr12 128399978 128404814 + sense_intronic NOVEL OTTHUMG00000168414.1 4837 564 2 ENSG00000256630.1 RP11-428I12.1 chr12 128437778 128439206 - unprocessed_pseudogene KNOWN OTTHUMG00000168436.1 1429 736 2 ENSG00000221749.1 AC107020.1 chr12 128669880 128669974 - miRNA NOVEL NA 95 95 1 ENSG00000139370.9 SLC15A4 chr12 128793191 128823983 - protein_coding KNOWN OTTHUMG00000168415.3 30793 5496 45 ENSG00000229588.1 RP11-479J7.2 chr1 166334884 166335762 + lincRNA NOVEL OTTHUMG00000034556.2 879 423 3 ENSG00000279500.1 RP11-21K12.2 chr12 128813186 128814750 - TEC KNOWN OTTHUMG00000168417.1 1565 1565 1 ENSG00000274695.1 RP11-21K12.3 chr12 128826836 128827579 + lincRNA NOVEL OTTHUMG00000187328.1 744 744 1 ENSG00000151948.10 GLT1D1 chr12 128853427 128984968 + protein_coding KNOWN OTTHUMG00000168437.2 131542 3478 62 ENSG00000255838.1 RP11-753B7.2 chr12 128944274 128945203 - unprocessed_pseudogene KNOWN OTTHUMG00000168438.1 930 672 2 ENSG00000256581.1 NLRP9P chr12 129013336 129016663 + unprocessed_pseudogene KNOWN OTTHUMG00000168439.1 3328 2655 2 ENSG00000151952.13 TMEM132D chr12 129071725 129903666 - protein_coding KNOWN OTTHUMG00000168400.1 831942 7094 22 ENSG00000249196.5 RP11-669N7.2 chr12 129109629 129113294 + antisense NOVEL OTTHUMG00000168401.1 3666 2271 20 ENSG00000277217.1 uc_338 chr12 129170092 129170238 - misc_RNA NOVEL NA 147 147 1 ENSG00000256699.1 RP11-669N7.3 chr12 129208601 129212662 + lincRNA NOVEL OTTHUMG00000168402.1 4062 1568 5 ENSG00000280051.1 RP11-206B11.1 chr12 129262345 129262824 + TEC KNOWN OTTHUMG00000168403.1 480 480 1 ENSG00000207451.1 RNU6-291P chr1 11226254 11226360 + snRNA KNOWN NA 107 107 1 ENSG00000225325.1 RP11-479J7.1 chr1 166387727 166452632 - lincRNA NOVEL OTTHUMG00000033265.1 64906 810 3 ENSG00000256085.1 RP11-337L12.1 chr12 129521303 129522763 - lincRNA NOVEL OTTHUMG00000168404.1 1461 739 2 ENSG00000256137.1 RP11-174M13.2 chr12 129681427 129698227 - lincRNA NOVEL OTTHUMG00000168405.1 16801 392 3 ENSG00000237578.2 RP11-174M13.1 chr12 129747388 129747892 + processed_pseudogene KNOWN OTTHUMG00000168392.1 505 505 1 ENSG00000280196.1 RP11-572C21.2 chr12 129839928 129840522 - TEC KNOWN OTTHUMG00000168393.1 595 595 1 ENSG00000251536.2 RP11-572C21.1 chr12 129852208 129854944 - lincRNA NOVEL OTTHUMG00000168394.1 2737 1986 2 ENSG00000261650.1 RP11-474D1.4 chr12 130024493 130044956 - lincRNA NOVEL OTTHUMG00000168372.2 20464 577 3 ENSG00000214039.7 RP11-474D1.3 chr12 130033454 130045057 - lincRNA NOVEL OTTHUMG00000168373.2 11604 4708 6 ENSG00000256298.1 RP11-474D1.1 chr12 130047132 130048376 + lincRNA NOVEL OTTHUMG00000168374.1 1245 353 2 ENSG00000256906.1 RP11-474D1.2 chr12 130070325 130072685 + lincRNA NOVEL OTTHUMG00000168375.1 2361 1713 2 ENSG00000279193.1 RP11-143E21.2 chr12 130121925 130122974 - TEC KNOWN OTTHUMG00000168376.1 1050 1050 1 ENSG00000230231.1 FMO7P chr1 166474745 166481565 + unprocessed_pseudogene KNOWN OTTHUMG00000033266.1 6821 768 4 ENSG00000276122.1 RP11-143E21.3 chr12 130138693 130140768 + lincRNA NOVEL OTTHUMG00000168377.1 2076 2076 1 ENSG00000250208.5 FZD10-AS1 chr12 130144315 130162256 - processed_transcript NOVEL OTTHUMG00000168379.2 17942 11498 13 ENSG00000280405.1 RP11-143E21.4 chr12 130144954 130145691 + TEC KNOWN OTTHUMG00000168378.1 738 738 1 ENSG00000111432.4 FZD10 chr12 130162459 130165740 + protein_coding KNOWN OTTHUMG00000168380.1 3282 3282 2 ENSG00000242963.1 RP11-143E21.1 chr12 130216807 130217157 - processed_pseudogene KNOWN OTTHUMG00000157836.1 351 351 1 ENSG00000259862.1 RP11-143E21.6 chr12 130249679 130266725 + lincRNA NOVEL OTTHUMG00000168381.2 17047 763 2 ENSG00000125207.6 PIWIL1 chr12 130337887 130372637 + protein_coding KNOWN OTTHUMG00000168382.2 34751 5280 53 ENSG00000279343.1 RP11-200K12.3 chr12 130350996 130351707 - TEC KNOWN OTTHUMG00000168383.1 712 712 1 ENSG00000279478.1 RP11-200K12.2 chr12 130383364 130383890 + TEC KNOWN OTTHUMG00000168384.1 527 527 1 ENSG00000060709.12 RIMBP2 chr12 130396137 130716281 - protein_coding KNOWN OTTHUMG00000168385.1 320145 8731 61 ENSG00000234142.1 RP11-276E17.2 chr1 166475772 166490039 - lincRNA NOVEL OTTHUMG00000033267.1 14268 701 3 ENSG00000256064.1 RP11-117L5.4 chr12 130419535 130421019 - lincRNA NOVEL OTTHUMG00000168386.1 1485 415 2 ENSG00000279905.1 RP11-117L5.1 chr12 130425004 130430661 + TEC KNOWN OTTHUMG00000168387.1 5658 5658 1 ENSG00000279146.1 RP11-117L5.3 chr12 130465008 130466315 - TEC KNOWN OTTHUMG00000168388.1 1308 1308 1 ENSG00000256725.1 RP11-662M24.2 chr12 130628316 130716281 - lincRNA NOVEL OTTHUMG00000168362.1 87966 258 4 ENSG00000256343.6 RP11-662M24.1 chr12 130651371 130669233 + lincRNA NOVEL OTTHUMG00000168322.4 17863 2660 17 ENSG00000279650.1 RP11-989F5.4 chr12 130775694 130776546 - TEC KNOWN OTTHUMG00000168364.1 853 853 1 ENSG00000111450.12 STX2 chr12 130789600 130839266 - protein_coding KNOWN OTTHUMG00000168365.2 49667 3723 32 ENSG00000256250.1 RP11-989F5.1 chr12 130810606 130812438 + lincRNA NOVEL OTTHUMG00000168323.1 1833 587 2 ENSG00000256299.1 RP11-989F5.3 chr12 130810821 130812622 - lincRNA NOVEL OTTHUMG00000168366.1 1802 317 2 ENSG00000222438.1 RNU6-1077P chr12 130869736 130869837 - snRNA KNOWN NA 102 102 1 ENSG00000238087.3 FMO8P chr1 166566178 166580705 + unprocessed_pseudogene KNOWN OTTHUMG00000033268.1 14528 1600 8 ENSG00000132341.10 RAN chr12 130871879 130877678 + protein_coding KNOWN OTTHUMG00000134328.7 5800 4825 62 ENSG00000206850.1 Y_RNA chr12 130906838 130906949 + misc_RNA NOVEL NA 112 112 1 ENSG00000111452.11 GPR133 chr12 130953907 131141469 + protein_coding KNOWN OTTHUMG00000168339.3 187563 14718 150 ENSG00000279940.1 RP11-243M5.5 chr12 130956384 130958031 - TEC KNOWN OTTHUMG00000168340.1 1648 1648 1 ENSG00000279976.1 RP11-243M5.4 chr12 130962175 130963028 + TEC KNOWN OTTHUMG00000168341.1 854 854 1 ENSG00000280200.1 RP11-243M5.2 chr12 130976786 130978812 + TEC KNOWN OTTHUMG00000168342.1 2027 2027 1 ENSG00000256204.1 RP11-243M5.1 chr12 130977562 130978768 + lincRNA NOVEL OTTHUMG00000168343.1 1207 409 2 ENSG00000279581.1 RP11-243M5.3 chr12 130980667 130981367 - TEC KNOWN OTTHUMG00000168344.1 701 701 1 ENSG00000280002.1 RP11-76C10.6 chr12 130988312 130990028 - TEC KNOWN OTTHUMG00000168345.1 1717 1717 1 ENSG00000256151.1 RP11-76C10.5 chr12 130990138 130993976 - lincRNA NOVEL OTTHUMG00000168346.1 3839 1277 5 ENSG00000215834.7 FMO9P chr1 166603675 166631400 + unitary_pseudogene KNOWN OTTHUMG00000078309.2 27726 2511 15 ENSG00000279128.1 RP11-76C10.4 chr12 131022769 131024741 - TEC KNOWN OTTHUMG00000168347.1 1973 1973 1 ENSG00000279993.1 RP11-76C10.3 chr12 131025561 131028060 - TEC KNOWN OTTHUMG00000168348.1 2500 2500 1 ENSG00000256810.1 RP11-76C10.2 chr12 131030570 131035487 - lincRNA NOVEL OTTHUMG00000168349.1 4918 568 2 ENSG00000204603.5 LINC01257 chr12 131165011 131212931 + lincRNA NOVEL OTTHUMG00000168350.1 47921 2562 8 ENSG00000280217.1 RP11-638F5.2 chr12 131235511 131237523 + TEC KNOWN OTTHUMG00000168351.1 2013 2013 1 ENSG00000226356.2 RPS6P20 chr12 131292068 131293176 - unprocessed_pseudogene KNOWN OTTHUMG00000157842.1 1109 1109 1 ENSG00000279746.1 RP11-495K9.2 chr12 131295522 131298218 + TEC KNOWN OTTHUMG00000168299.1 2697 2697 1 ENSG00000248703.2 RP11-495K9.3 chr12 131296110 131297972 - lincRNA NOVEL OTTHUMG00000168300.1 1863 1315 2 ENSG00000212251.1 RNA5SP376 chr12 131299640 131299751 - rRNA KNOWN NA 112 112 1 ENSG00000230294.4 RP13-507P19.2 chr12 131347470 131367555 + lincRNA NOVEL OTTHUMG00000168301.2 20086 2009 3 ENSG00000234984.1 FMO10P chr1 166665885 166682196 + unitary_pseudogene KNOWN OTTHUMG00000034323.1 16312 1493 8 ENSG00000256484.1 RP13-507P19.1 chr12 131366660 131371059 + lincRNA NOVEL OTTHUMG00000168302.1 4400 532 2 ENSG00000280319.1 RP11-897M7.3 chr12 131436447 131436960 + TEC KNOWN OTTHUMG00000168303.1 514 514 1 ENSG00000275232.1 RP11-897M7.4 chr12 131447337 131455436 - lincRNA NOVEL OTTHUMG00000187334.1 8100 464 5 ENSG00000256209.1 RP11-897M7.1 chr12 131469311 131492951 - lincRNA NOVEL OTTHUMG00000168304.1 23641 493 3 ENSG00000279388.1 RP11-897M7.2 chr12 131478844 131483034 - TEC KNOWN OTTHUMG00000168305.1 4191 4191 1 ENSG00000280698.1 AC073578.1 chr12 131500849 131500961 - miRNA NOVEL NA 113 113 1 ENSG00000255704.1 RP11-292I17.1 chr12 131596857 131597115 - processed_pseudogene KNOWN OTTHUMG00000168306.1 259 259 1 ENSG00000279455.1 RP11-495K9.10 chr12 131620178 131620765 - TEC KNOWN OTTHUMG00000168307.1 588 588 1 ENSG00000256258.1 RP11-495K9.9 chr12 131621891 131623203 - lincRNA NOVEL OTTHUMG00000168308.1 1313 617 2 ENSG00000279153.1 RP11-495K9.8 chr12 131645918 131646444 + TEC KNOWN OTTHUMG00000168309.1 527 527 1 ENSG00000232341.2 RPL4P2 chr1 166747379 166748660 + processed_pseudogene KNOWN OTTHUMG00000034324.2 1282 1282 1 ENSG00000256424.1 RP11-495K9.7 chr12 131647113 131648121 - lincRNA NOVEL OTTHUMG00000168310.1 1009 494 2 ENSG00000212154.1 RNA5SP377 chr12 131661063 131661174 + rRNA KNOWN NA 112 112 1 ENSG00000249926.2 RP11-495K9.6 chr12 131662596 131664704 + lincRNA NOVEL OTTHUMG00000168311.1 2109 1561 2 ENSG00000243499.1 RPS6P21 chr12 131667492 131668246 + processed_pseudogene KNOWN OTTHUMG00000168312.1 755 755 1 ENSG00000061936.8 SFSWAP chr12 131711081 131799737 + protein_coding KNOWN OTTHUMG00000168319.2 88657 10157 90 ENSG00000255933.1 RP11-495K9.5 chr12 131756966 131758047 - lincRNA NOVEL OTTHUMG00000168313.1 1082 666 2 ENSG00000200516.1 RNA5SP378 chr12 131801315 131801434 - rRNA KNOWN NA 120 120 1 ENSG00000200483.1 RNU6-1017P chr12 131815263 131815368 - snRNA KNOWN NA 106 106 1 ENSG00000198598.5 MMP17 chr12 131828393 131851783 + protein_coding KNOWN OTTHUMG00000168050.2 23391 4003 53 ENSG00000256955.2 RP11-417L19.2 chr12 131857420 131864538 + lincRNA NOVEL OTTHUMG00000168051.2 7119 770 3 ENSG00000232148.1 FMO11P chr1 166763334 166792767 + unitary_pseudogene KNOWN OTTHUMG00000034317.2 29434 1370 10 ENSG00000177169.8 ULK1 chr12 131894651 131923167 + protein_coding KNOWN OTTHUMG00000168052.5 28517 7608 54 ENSG00000279283.1 RP11-417L19.5 chr12 131896500 131898239 + TEC KNOWN OTTHUMG00000168248.1 1740 1740 1 ENSG00000255992.1 RP11-417L19.4 chr12 131924736 131929351 - lincRNA NOVEL OTTHUMG00000168249.1 4616 426 3 ENSG00000177192.12 PUS1 chr12 131929200 131945896 + protein_coding KNOWN OTTHUMG00000128507.6 16697 5732 48 ENSG00000273568.1 RP11-417L19.6 chr12 131934642 131934928 + sense_intronic NOVEL OTTHUMG00000187337.1 287 287 1 ENSG00000183495.12 EP400 chr12 131949920 132081102 + protein_coding KNOWN OTTHUMG00000187346.2 131183 18705 156 ENSG00000271905.1 AC137590.1 chr12 132001690 132001775 - miRNA NOVEL NA 86 86 1 ENSG00000208892.1 SNORA49 chr12 132031224 132031359 + snoRNA KNOWN NA 136 136 1 ENSG00000257000.1 RP13-820C6.2 chr12 132077803 132080460 - antisense NOVEL OTTHUMG00000168250.1 2658 495 2 ENSG00000274670.1 RP13-820C6.4 chr12 132083540 132083779 - lincRNA NOVEL OTTHUMG00000187347.1 240 240 1 ENSG00000232223.1 CNN2P10 chr1 166796266 166797183 + processed_pseudogene KNOWN OTTHUMG00000034318.1 918 918 1 ENSG00000185684.11 EP400NL chr12 132084283 132131639 + protein_coding KNOWN OTTHUMG00000168251.3 47357 12647 70 ENSG00000279640.1 RP13-977J11.6 chr12 132100013 132100820 - TEC KNOWN OTTHUMG00000168252.1 808 808 1 ENSG00000256804.1 RP13-977J11.5 chr12 132126461 132126764 - processed_pseudogene KNOWN OTTHUMG00000168253.1 304 304 1 ENSG00000185163.8 DDX51 chr12 132136594 132144335 - protein_coding KNOWN OTTHUMG00000168254.1 7742 6365 45 ENSG00000184967.5 NOC4L chr12 132144448 132152473 + protein_coding KNOWN OTTHUMG00000168260.3 8026 2029 37 ENSG00000276693.1 RP13-977J11.9 chr12 132169823 132170043 + lincRNA NOVEL OTTHUMG00000187351.1 221 221 1 ENSG00000256576.2 RP13-977J11.2 chr12 132186735 132189695 - lincRNA NOVEL OTTHUMG00000168255.2 2961 1484 2 ENSG00000256312.1 RP13-977J11.8 chr12 132190213 132190997 + lincRNA NOVEL OTTHUMG00000168261.1 785 391 2 ENSG00000182870.11 GALNT9 chr12 132196372 132329349 - protein_coding KNOWN OTTHUMG00000168256.4 132978 6969 52 ENSG00000279480.1 RP13-977J11.3 chr12 132200436 132201287 + TEC KNOWN OTTHUMG00000168257.1 852 852 1 ENSG00000143157.10 POGK chr1 166839447 166856344 + protein_coding KNOWN OTTHUMG00000034325.1 16898 8448 16 ENSG00000256943.1 RP13-895J2.2 chr12 132275391 132278329 + antisense NOVEL OTTHUMG00000167981.1 2939 1819 5 ENSG00000256542.2 RP13-895J2.3 chr12 132277349 132280900 + antisense NOVEL OTTHUMG00000167958.3 3552 3039 2 ENSG00000278872.1 RP13-895J2.4 chr12 132279256 132280900 - TEC KNOWN OTTHUMG00000167982.1 1645 1645 1 ENSG00000277011.1 RP13-895J2.6 chr12 132282814 132284606 + lincRNA NOVEL OTTHUMG00000167983.1 1793 1793 1 ENSG00000255916.1 RP13-895J2.7 chr12 132329850 132331575 + antisense NOVEL OTTHUMG00000167984.1 1726 476 2 ENSG00000279113.1 RP13-895J2.8 chr12 132332005 132332432 + TEC KNOWN OTTHUMG00000167985.1 428 428 1 ENSG00000279704.1 RP13-895J2.9 chr12 132351855 132352322 + TEC KNOWN OTTHUMG00000167986.1 468 468 1 ENSG00000279023.1 RP13-895J2.10 chr12 132360734 132361198 + TEC KNOWN OTTHUMG00000167987.1 465 465 1 ENSG00000280150.1 RP13-895J2.11 chr12 132362810 132363348 + TEC KNOWN OTTHUMG00000167988.1 539 539 1 ENSG00000274373.1 RP13-714J12.1 chr12 132424504 132425208 - lincRNA NOVEL OTTHUMG00000187078.1 705 705 1 ENSG00000238173.1 RPL39P6 chr1 11232963 11233112 + processed_pseudogene KNOWN OTTHUMG00000002000.1 150 150 1 ENSG00000152382.5 TADA1 chr1 166856510 166876327 - protein_coding KNOWN OTTHUMG00000034321.1 19818 2963 12 ENSG00000256783.1 RP11-503G7.1 chr12 132457160 132460024 + lincRNA NOVEL OTTHUMG00000167989.1 2865 1035 2 ENSG00000256875.2 RP11-503G7.2 chr12 132462242 132462856 + lincRNA NOVEL OTTHUMG00000167990.2 615 615 1 ENSG00000112787.11 FBRSL1 chr12 132489551 132585188 + protein_coding KNOWN OTTHUMG00000167991.3 95638 9311 46 ENSG00000280287.1 RP13-554M15.7 chr12 132550729 132554947 + TEC KNOWN OTTHUMG00000168042.1 4219 4219 1 ENSG00000279700.1 RP13-554M15.2 chr12 132565071 132566425 + TEC KNOWN OTTHUMG00000168017.1 1355 1355 1 ENSG00000277052.1 MIR6763 chr12 132581997 132582061 + miRNA KNOWN NA 65 65 1 ENSG00000277186.1 RP13-554M15.8 chr12 132593031 132593698 - lincRNA NOVEL OTTHUMG00000187079.1 668 668 1 ENSG00000204583.8 LRCOL1 chr12 132603150 132610543 - protein_coding KNOWN OTTHUMG00000168043.4 7394 1817 27 ENSG00000187848.11 P2RX2 chr12 132618780 132622386 + protein_coding KNOWN OTTHUMG00000168018.2 3607 1969 82 ENSG00000280311.1 RP13-554M15.5 chr12 132621999 132622973 - TEC KNOWN OTTHUMG00000168044.1 975 975 1 ENSG00000225171.2 DUTP6 chr1 166868748 166869209 + processed_pseudogene KNOWN OTTHUMG00000034322.2 462 462 1 ENSG00000177084.15 POLE chr12 132623753 132687365 - protein_coding KNOWN OTTHUMG00000168045.5 63613 16609 213 ENSG00000176894.8 PXMP2 chr12 132687606 132704991 + protein_coding KNOWN OTTHUMG00000168019.2 17386 1408 18 ENSG00000256632.3 RP13-672B3.2 chr12 132688049 132714912 + protein_coding KNOWN OTTHUMG00000168020.1 26864 567 5 ENSG00000247077.5 PGAM5 chr12 132710819 132722734 + protein_coding KNOWN OTTHUMG00000168021.2 11916 3952 23 ENSG00000201469.1 RNA5SP379 chr12 132723945 132724057 - rRNA KNOWN NA 113 113 1 ENSG00000176915.13 ANKLE2 chr12 132725503 132761888 - protein_coding KNOWN OTTHUMG00000168046.2 36386 17517 70 ENSG00000256108.1 RP13-672B3.5 chr12 132745156 132745729 + processed_pseudogene KNOWN OTTHUMG00000157850.4 574 574 1 ENSG00000090615.11 GOLGA3 chr12 132768909 132828858 - protein_coding KNOWN OTTHUMG00000168023.5 59950 10550 110 ENSG00000072609.16 CHFR chr12 132822187 132956304 - protein_coding KNOWN OTTHUMG00000167930.20 134118 17127 181 ENSG00000232888.4 RPS11P5 chr12 132825701 132826184 + processed_pseudogene KNOWN OTTHUMG00000168024.1 484 484 1 ENSG00000143195.11 ILDR2 chr1 166895711 166975482 - protein_coding KNOWN OTTHUMG00000034320.6 79772 13884 61 ENSG00000252079.1 RNU6-327P chr12 132835374 132835500 - snRNA KNOWN NA 127 127 1 ENSG00000278949.1 RP11-46H11.11 chr12 132865855 132867958 - TEC KNOWN OTTHUMG00000168025.1 2104 2104 1 ENSG00000236617.2 RP11-46H11.12 chr12 132887842 132888583 + antisense NOVEL OTTHUMG00000168026.1 742 555 2 ENSG00000255703.1 RP11-46H11.2 chr12 132899984 132900368 + processed_pseudogene KNOWN OTTHUMG00000167932.1 385 385 1 ENSG00000250790.4 RP11-46H11.3 chr12 132911470 132914732 + lincRNA NOVEL OTTHUMG00000167933.2 3263 3263 1 ENSG00000196458.9 ZNF605 chr12 132918308 132956306 - protein_coding KNOWN OTTHUMG00000167934.3 37999 10824 22 ENSG00000256563.2 NANOGNBP2 chr12 132972338 132972890 - processed_pseudogene KNOWN OTTHUMG00000167935.2 553 553 1 ENSG00000198393.6 ZNF26 chr12 132986365 133032952 + protein_coding KNOWN OTTHUMG00000167936.4 46588 20863 22 ENSG00000252269.1 RNU4ATAC12P chr12 132995190 132995302 - snRNA KNOWN NA 113 113 1 ENSG00000246394.6 RP11-386I8.6 chr12 133030389 133037222 - lincRNA NOVEL OTTHUMG00000167937.3 6834 1301 7 ENSG00000143194.11 MAEL chr1 166975582 167022214 + protein_coding KNOWN OTTHUMG00000034432.2 46633 3148 59 ENSG00000255807.1 PTP4A1P2 chr12 133033503 133033956 + processed_pseudogene KNOWN OTTHUMG00000167938.1 454 454 1 ENSG00000198040.9 ZNF84 chr12 133037292 133063304 + protein_coding KNOWN OTTHUMG00000167939.4 26013 9520 61 ENSG00000279466.1 RP11-386I8.5 chr12 133073516 133073983 - TEC KNOWN OTTHUMG00000167940.1 468 468 1 ENSG00000279817.1 RP11-386I8.4 chr12 133077762 133078392 - TEC KNOWN OTTHUMG00000167941.1 631 631 1 ENSG00000196387.8 ZNF140 chr12 133079838 133107544 + protein_coding KNOWN OTTHUMG00000167942.2 27707 5374 50 ENSG00000281302.1 Y_RNA chr12 133087513 133087615 - misc_RNA NOVEL NA 103 103 1 ENSG00000214029.4 ZNF891 chr12 133106817 133130473 - protein_coding KNOWN OTTHUMG00000167943.2 23657 15455 2 ENSG00000271963.1 CTD-2140B24.6 chr12 133115692 133122340 + antisense NOVEL OTTHUMG00000185828.1 6649 392 2 ENSG00000240991.3 RPL23AP67 chr12 133125479 133125952 + processed_pseudogene KNOWN OTTHUMG00000157851.3 474 474 1 ENSG00000256223.4 ZNF10 chr12 133130575 133159465 + protein_coding KNOWN OTTHUMG00000167944.2 28891 5541 42 ENSG00000200036.1 RNA5SP65 chr1 167005959 167006077 + rRNA KNOWN NA 119 119 1 ENSG00000256825.4 CTD-2140B24.4 chr12 133130984 133202369 + protein_coding PUTATIVE OTTHUMG00000167945.2 71386 1374 11 ENSG00000090612.19 ZNF268 chr12 133181409 133214831 + protein_coding KNOWN OTTHUMG00000167946.6 33423 14095 91 ENSG00000255919.1 AC226150.3 chr12 133217210 133217675 - processed_pseudogene KNOWN OTTHUMG00000167948.2 466 466 1 ENSG00000227059.5 ANHX chr12 133218312 133236095 - protein_coding KNOWN OTTHUMG00000167949.1 17784 3452 17 ENSG00000239190.1 RNU6-717P chr12 133238335 133238438 - snRNA KNOWN NA 104 104 1 ENSG00000238443.1 Y_RNA chr12 133238455 133238549 + misc_RNA NOVEL NA 95 95 1 ENSG00000279924.1 RP11-341D18.2 chr13 18174010 18178465 - unprocessed_pseudogene KNOWN OTTHUMG00000189380.1 4456 1229 4 ENSG00000279516.1 FAM230C chr13 18195297 18232024 + processed_transcript KNOWN OTTHUMG00000189381.1 36728 1970 8 ENSG00000279081.1 AL356585.2 chr13 18206570 18207469 - protein_coding NOVEL NA 900 900 1 ENSG00000280208.1 RP11-341D18.4 chr13 18253526 18270822 - unprocessed_pseudogene KNOWN OTTHUMG00000189382.1 17297 1708 12 ENSG00000227907.1 RP11-102C16.3 chr1 167052551 167058542 + antisense NOVEL OTTHUMG00000034433.1 5992 452 2 ENSG00000279124.1 RP11-341D18.5 chr13 18279320 18309934 - unprocessed_pseudogene KNOWN OTTHUMG00000189383.1 30615 2396 6 ENSG00000216097.3 AL356585.1 chr13 18282729 18282822 - miRNA NOVEL NA 94 94 1 ENSG00000279730.1 AL356585.3 chr13 18297404 18298976 + pseudogene KNOWN NA 1573 1566 3 ENSG00000279231.1 RP11-341D18.6 chr13 18331933 18348596 + unprocessed_pseudogene KNOWN OTTHUMG00000189384.1 16664 1017 8 ENSG00000268486.4 ABC7-42418200C9.1 chr13 18408806 18431605 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000189311.2 22800 3447 16 ENSG00000276183.1 U6 chr13 18418526 18418632 + snRNA NOVEL NA 107 107 1 ENSG00000215604.3 ZNF962P chr13 18467172 18485448 - unprocessed_pseudogene KNOWN OTTHUMG00000016450.1 18277 3140 5 ENSG00000270496.1 BNIP3P7 chr13 18491904 18492419 + processed_pseudogene KNOWN OTTHUMG00000184738.1 516 516 1 ENSG00000231238.1 LINC00349 chr13 18540497 18550697 + lincRNA NOVEL OTTHUMG00000016451.1 10201 841 2 ENSG00000233905.1 LONRF2P2 chr13 18609132 18609702 + processed_pseudogene KNOWN OTTHUMG00000016457.1 571 571 1 ENSG00000143167.10 GPA33 chr1 167052836 167090631 - protein_coding KNOWN OTTHUMG00000034435.3 37796 3003 19 ENSG00000229788.1 LINC00388 chr13 18610298 18611675 - lincRNA NOVEL OTTHUMG00000016452.1 1378 663 2 ENSG00000277682.1 AL359737.1 chr13 18629193 18629278 + miRNA NOVEL NA 86 86 1 ENSG00000235876.2 FEM1AP4 chr13 18665235 18667221 + processed_pseudogene KNOWN OTTHUMG00000016453.1 1987 1987 1 ENSG00000231914.1 LINC00387 chr13 18672827 18676163 + lincRNA NOVEL OTTHUMG00000016454.1 3337 458 2 ENSG00000226361.5 TERF1P5 chr13 18680494 18681700 + processed_pseudogene KNOWN OTTHUMG00000016455.1 1207 1207 1 ENSG00000228797.2 FAM207BP chr13 18697003 18697507 + processed_pseudogene KNOWN OTTHUMG00000016463.1 505 505 1 ENSG00000236169.1 LINC00418 chr13 18718767 18719729 - lincRNA NOVEL OTTHUMG00000016461.1 963 430 2 ENSG00000230931.2 GXYLT1P1 chr13 18724415 18724904 - processed_pseudogene KNOWN OTTHUMG00000016459.2 490 490 1 ENSG00000204718.3 CNN2P12 chr13 18726706 18727414 + processed_pseudogene KNOWN OTTHUMG00000016462.1 709 709 1 ENSG00000227784.1 ZNF965P chr13 18734080 18734896 + processed_pseudogene KNOWN OTTHUMG00000016464.1 817 817 1 ENSG00000198842.8 DUSP27 chr1 167094045 167129165 + protein_coding KNOWN OTTHUMG00000034434.2 35121 4304 19 ENSG00000244155.1 CYP4F34P chr13 18741730 18742718 - unprocessed_pseudogene KNOWN OTTHUMG00000016466.1 989 481 3 ENSG00000227568.1 SNX18P26 chr13 18807279 18808018 - processed_pseudogene KNOWN OTTHUMG00000016467.1 740 740 1 ENSG00000225016.1 LINC00328-2P chr13 18809830 18810048 + processed_pseudogene KNOWN OTTHUMG00000016468.1 219 219 1 ENSG00000206192.7 ANKRD20A9P chr13 18816718 18871967 - unprocessed_pseudogene KNOWN OTTHUMG00000016458.1 55250 2978 19 ENSG00000242756.2 RHOT1P3 chr13 18837768 18838098 - processed_pseudogene KNOWN OTTHUMG00000086705.1 331 331 1 ENSG00000227332.1 RP11-38M15.11 chr13 18859827 18860742 + lincRNA NOVEL OTTHUMG00000016460.2 916 489 2 ENSG00000223024.1 RNU6-55P chr13 18869185 18869291 - snRNA KNOWN NA 107 107 1 ENSG00000206787.1 RNU6-76P chr13 18880054 18880157 + snRNA KNOWN NA 104 104 1 ENSG00000235500.2 SNX19P2 chr13 18892260 18895230 - processed_pseudogene KNOWN OTTHUMG00000016471.1 2971 2971 1 ENSG00000226250.1 LINC00408 chr13 18905439 18907810 + lincRNA NOVEL OTTHUMG00000016469.1 2372 560 4 ENSG00000213068.3 RP11-277B15.1 chr1 167162423 167162837 - processed_pseudogene KNOWN OTTHUMG00000034437.1 415 415 1 ENSG00000231358.2 RP11-442J17.3 chr13 18921889 18923765 - lincRNA NOVEL OTTHUMG00000016470.2 1877 746 2 ENSG00000226057.5 PHF2P2 chr13 18946755 19062718 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000016472.2 115964 2865 23 ENSG00000232685.4 LINC00442 chr13 19008259 19012559 + antisense NOVEL OTTHUMG00000016475.3 4301 2178 7 ENSG00000229375.1 USP24P1 chr13 19015487 19019336 - unprocessed_pseudogene KNOWN OTTHUMG00000016474.1 3850 779 5 ENSG00000187721.8 GTF2IP3 chr13 19026001 19032626 - unprocessed_pseudogene KNOWN OTTHUMG00000016473.1 6626 494 4 ENSG00000226619.1 RP11-301J16.7 chr13 19027837 19028701 + antisense NOVEL OTTHUMG00000016476.1 865 199 2 ENSG00000252287.1 RNA5SP24 chr13 19088487 19088581 + rRNA KNOWN NA 95 95 1 ENSG00000224778.1 CENPIP1 chr13 19126399 19139611 + unprocessed_pseudogene KNOWN OTTHUMG00000016482.1 13213 902 7 ENSG00000234894.1 RP11-408E5.6 chr13 19151554 19152307 - unprocessed_pseudogene KNOWN OTTHUMG00000016479.1 754 379 4 ENSG00000229147.1 SMPD4P2 chr13 19152567 19171194 - unprocessed_pseudogene KNOWN OTTHUMG00000016483.1 18628 1634 14 ENSG00000231605.4 LINC01363 chr1 167175917 167195792 - antisense NOVEL OTTHUMG00000034431.1 19876 1375 16 ENSG00000278337.1 RP11-408E5.8 chr13 19172773 19172925 + unprocessed_pseudogene KNOWN OTTHUMG00000187786.1 153 153 1 ENSG00000198033.10 TUBA3C chr13 19173770 19181852 - protein_coding KNOWN OTTHUMG00000016481.2 8083 1551 11 ENSG00000121388.5 RP11-408E5.4 chr13 19185225 19187349 + unprocessed_pseudogene KNOWN OTTHUMG00000016477.3 2125 348 2 ENSG00000227879.2 PSPC1P1 chr13 19201637 19227432 - unprocessed_pseudogene KNOWN OTTHUMG00000016480.1 25796 665 5 ENSG00000232243.1 RP11-408E5.5 chr13 19262797 19263873 - lincRNA NOVEL OTTHUMG00000016478.1 1077 514 4 ENSG00000237636.2 ANKRD26P3 chr13 19290593 19344825 - unprocessed_pseudogene KNOWN OTTHUMG00000016484.2 54233 2748 15 ENSG00000215349.2 MRPL3P1 chr13 19304593 19305625 - processed_pseudogene KNOWN OTTHUMG00000016485.1 1033 1033 1 ENSG00000236834.1 LINC00421 chr13 19345049 19346749 + lincRNA NOVEL OTTHUMG00000016488.1 1701 1054 2 ENSG00000224976.2 PARP4P2 chr13 19349137 19407962 + unprocessed_pseudogene KNOWN OTTHUMG00000016486.2 58826 3326 21 ENSG00000231184.3 FAM58DP chr13 19382454 19383072 + processed_pseudogene KNOWN OTTHUMG00000016487.1 619 619 1 ENSG00000120942.12 UBIAD1 chr1 11273206 11296049 + protein_coding KNOWN OTTHUMG00000002075.2 22844 5082 12 ENSG00000272205.1 RP11-277B15.3 chr1 167219831 167220512 - lincRNA NOVEL OTTHUMG00000185307.1 682 682 1 ENSG00000229791.1 RP11-385E5.5 chr13 19408042 19409529 - lincRNA NOVEL OTTHUMG00000016489.1 1488 1059 2 ENSG00000237164.1 SLC25A15P2 chr13 19411231 19416188 + unprocessed_pseudogene KNOWN OTTHUMG00000016490.1 4958 338 3 ENSG00000132958.16 TPTE2 chr13 19422877 19536762 - protein_coding KNOWN OTTHUMG00000016493.3 113886 2287 108 ENSG00000223625.1 CYCSP32 chr13 19458398 19458718 - processed_pseudogene KNOWN OTTHUMG00000016492.1 321 321 1 ENSG00000232894.1 MRPS31P2 chr13 19552571 19570288 - unprocessed_pseudogene KNOWN OTTHUMG00000016494.1 17718 518 4 ENSG00000215572.2 ESRRAP1 chr13 19560013 19561269 - processed_pseudogene KNOWN OTTHUMG00000016495.1 1257 1257 1 ENSG00000238132.2 CASC4P1 chr13 19563589 19564900 - processed_pseudogene KNOWN OTTHUMG00000016496.2 1312 1312 1 ENSG00000225316.1 LINC00350 chr13 19587118 19588350 + lincRNA NOVEL OTTHUMG00000016497.1 1233 422 2 ENSG00000196199.12 MPHOSPH8 chr13 19633681 19673459 + protein_coding KNOWN OTTHUMG00000016498.3 39779 4905 28 ENSG00000226352.2 RP11-523H24.3 chr13 19674624 19675884 + antisense NOVEL OTTHUMG00000016499.2 1261 376 2 ENSG00000143190.20 POU2F1 chr1 167220829 167427345 + protein_coding KNOWN OTTHUMG00000034436.9 206517 15753 176 ENSG00000121390.16 PSPC1 chr13 19674752 19783019 - protein_coding KNOWN OTTHUMG00000016502.4 108268 3223 41 ENSG00000275014.1 Metazoa_SRP chr13 19736975 19737254 - misc_RNA NOVEL NA 280 280 1 ENSG00000233469.1 ST6GALNAC4P1 chr13 19818121 19818619 - processed_pseudogene KNOWN OTTHUMG00000016501.1 499 499 1 ENSG00000132950.17 ZMYM5 chr13 19823482 19863636 - protein_coding KNOWN OTTHUMG00000016504.5 40155 3713 45 ENSG00000223576.2 RP11-61K9.2 chr13 19841827 19843672 + antisense NOVEL OTTHUMG00000016503.2 1846 444 2 ENSG00000275964.1 RP11-61K9.3 chr13 19863858 19865048 + lincRNA NOVEL OTTHUMG00000187050.1 1191 1191 1 ENSG00000266230.1 AL591925.1 chr13 19930804 19930891 - miRNA NOVEL NA 88 88 1 ENSG00000121741.15 ZMYM2 chr13 19958670 20091829 + protein_coding KNOWN OTTHUMG00000016507.8 133160 13618 143 ENSG00000237672.1 KRR1P1 chr13 20070250 20072136 - processed_pseudogene KNOWN OTTHUMG00000016505.1 1887 803 3 ENSG00000279951.1 RP11-264J4.8 chr13 20092632 20094144 + TEC KNOWN OTTHUMG00000175960.1 1513 1513 1 ENSG00000272033.1 RP11-52A20.2 chr1 167379108 167381000 + sense_intronic NOVEL OTTHUMG00000185366.1 1893 1893 1 ENSG00000236076.1 LINC01072 chr13 20102701 20103230 + lincRNA NOVEL OTTHUMG00000016506.1 530 431 2 ENSG00000121743.3 GJA3 chr13 20138255 20161049 - protein_coding KNOWN OTTHUMG00000016510.3 22795 5211 2 ENSG00000226633.2 PPIAP28 chr13 20178978 20179462 - processed_pseudogene KNOWN OTTHUMG00000016508.1 485 485 1 ENSG00000260131.1 LINC00556 chr13 20181531 20181942 + antisense NOVEL OTTHUMG00000175961.1 412 412 1 ENSG00000165474.5 GJB2 chr13 20187470 20192898 - protein_coding KNOWN OTTHUMG00000016513.1 5429 2427 3 ENSG00000279065.1 RP11-264J4.10 chr13 20194412 20196005 + TEC KNOWN OTTHUMG00000175962.1 1594 1594 1 ENSG00000121742.14 GJB6 chr13 20221971 20232395 - protein_coding KNOWN OTTHUMG00000016515.3 10425 2244 15 ENSG00000165475.12 CRYL1 chr13 20403667 20525857 - protein_coding KNOWN OTTHUMG00000016516.2 122191 2196 21 ENSG00000263978.1 MIR4499 chr13 20433778 20433846 - miRNA KNOWN NA 69 69 1 ENSG00000277020.3 RP11-476H16.1 chr13 20564708 20567045 - antisense NOVEL OTTHUMG00000187052.1 2338 787 7 ENSG00000198821.9 CD247 chr1 167430640 167518610 - protein_coding KNOWN OTTHUMG00000034593.2 87971 4034 41 ENSG00000032742.16 IFT88 chr13 20567069 20691437 + protein_coding KNOWN OTTHUMG00000016517.4 124369 6111 86 ENSG00000276024.1 AL590096.1 chr13 20575758 20575835 - miRNA NOVEL NA 78 78 1 ENSG00000238286.1 SLC35E1P1 chr13 20607268 20608131 + processed_pseudogene KNOWN OTTHUMG00000016518.1 864 864 1 ENSG00000222726.1 RNU2-7P chr13 20612161 20612338 + snRNA KNOWN NA 178 178 1 ENSG00000278291.1 RP11-172H24.4 chr13 20699307 20703718 - antisense NOVEL OTTHUMG00000187101.2 4412 4412 1 ENSG00000172458.4 IL17D chr13 20702127 20723098 + protein_coding KNOWN OTTHUMG00000016521.2 20972 3327 8 ENSG00000279135.1 RP11-261P13.5 chr13 20712431 20714146 + TEC KNOWN OTTHUMG00000186834.1 1716 1716 1 ENSG00000150456.9 N6AMT2 chr13 20728731 20773958 - protein_coding KNOWN OTTHUMG00000016519.1 45228 1339 12 ENSG00000233524.1 RANP8 chr13 20747035 20748057 - processed_pseudogene KNOWN OTTHUMG00000016520.1 1023 713 2 ENSG00000275485.1 RP11-261P13.6 chr13 20768876 20769375 - sense_intronic NOVEL OTTHUMG00000187102.1 500 500 1 ENSG00000233411.1 RP11-104L21.2 chr1 167457383 167458661 - sense_intronic NOVEL OTTHUMG00000040633.1 1279 303 2 ENSG00000132953.15 XPO4 chr13 20777329 20903048 - protein_coding KNOWN OTTHUMG00000016528.2 125720 10500 53 ENSG00000236704.1 CNOT4P1 chr13 20921664 20923233 - processed_pseudogene KNOWN OTTHUMG00000016522.1 1570 1199 2 ENSG00000233780.3 HNRNPA1P30 chr13 20938564 20949599 - transcribed_processed_pseudogene KNOWN OTTHUMG00000016523.2 11036 1624 8 ENSG00000234363.1 PPIAP27 chr13 20956179 20956443 - processed_pseudogene KNOWN OTTHUMG00000016524.1 265 265 1 ENSG00000213621.3 RPSAP54 chr13 20961310 20962195 + processed_pseudogene KNOWN OTTHUMG00000016525.1 886 886 1 ENSG00000150457.8 LATS2 chr13 20973032 21061547 - protein_coding KNOWN OTTHUMG00000016531.1 88516 5578 11 ENSG00000280785.1 U6 chr13 20999367 20999467 - snRNA NOVEL NA 101 101 1 ENSG00000233851.1 LATS2-AS1 chr13 21005157 21018122 + antisense NOVEL OTTHUMG00000016527.1 12966 632 2 ENSG00000201821.1 RNU4-9P chr13 21038529 21038667 - snRNA KNOWN NA 139 139 1 ENSG00000180172.6 RPS12P23 chr13 21094318 21094714 - processed_pseudogene KNOWN OTTHUMG00000016529.1 397 397 1 ENSG00000273160.1 RP11-104L21.3 chr1 167457742 167459891 - lincRNA NOVEL OTTHUMG00000185991.1 2150 303 2 ENSG00000225585.1 IPPKP1 chr13 21103003 21104371 - processed_pseudogene KNOWN OTTHUMG00000016530.1 1369 768 3 ENSG00000275689.1 FAS-AS1 chr13 21126271 21126396 - misc_RNA NOVEL NA 126 126 1 ENSG00000252128.1 SNORD27 chr13 21139886 21139957 - snoRNA NOVEL NA 72 72 1 ENSG00000150459.11 SAP18 chr13 21140514 21149084 + protein_coding KNOWN OTTHUMG00000016535.4 8571 3396 25 ENSG00000165480.14 SKA3 chr13 21153595 21176602 - protein_coding KNOWN OTTHUMG00000016539.4 23008 3048 39 ENSG00000173141.4 MRPL57 chr13 21176645 21179084 + protein_coding KNOWN OTTHUMG00000016532.2 2440 2246 2 ENSG00000271250.1 RP11-101P17.14 chr13 21216555 21216660 + processed_pseudogene KNOWN OTTHUMG00000184855.1 106 106 1 ENSG00000233405.1 LINC01046 chr13 21234568 21235204 + lincRNA NOVEL OTTHUMG00000016533.1 637 405 2 ENSG00000235438.6 ESRRAP2 chr13 21260015 21295003 + transcribed_processed_pseudogene KNOWN OTTHUMG00000016534.3 34989 3051 16 ENSG00000277077.1 RP11-101P17.15 chr13 21287634 21287828 - unprocessed_pseudogene KNOWN OTTHUMG00000187790.1 195 195 1 ENSG00000227776.1 AKR1D1P1 chr1 167519536 167520586 + processed_pseudogene KNOWN OTTHUMG00000034681.1 1051 936 2 ENSG00000233325.3 MIPEPP3 chr13 21298139 21306373 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000016538.2 8235 617 7 ENSG00000224429.6 LINC00539 chr13 21303515 21348721 - lincRNA KNOWN OTTHUMG00000016541.3 45207 1859 22 ENSG00000215571.5 GRK6P1 chr13 21319156 21320866 + processed_pseudogene KNOWN OTTHUMG00000016540.1 1711 1711 1 ENSG00000235076.2 GAPDHP52 chr13 21358373 21359314 + processed_pseudogene KNOWN OTTHUMG00000016542.2 942 942 1 ENSG00000222747.1 RNA5SP25 chr13 21369790 21369899 - rRNA KNOWN NA 110 110 1 ENSG00000180776.14 ZDHHC20 chr13 21372573 21459370 - protein_coding KNOWN OTTHUMG00000017410.2 86798 5574 87 ENSG00000236953.1 ZDHHC20-IT1 chr13 21376977 21377874 - sense_intronic NOVEL OTTHUMG00000046192.1 898 440 2 ENSG00000226908.1 HIST1H2BPS3 chr13 21483834 21484174 - processed_pseudogene KNOWN OTTHUMG00000016544.1 341 341 1 ENSG00000165487.12 MICU2 chr13 21492691 21604214 - protein_coding KNOWN OTTHUMG00000067414.7 111524 3645 52 ENSG00000230022.1 FNTAP2 chr13 21530690 21531323 + processed_pseudogene KNOWN OTTHUMG00000016545.1 634 634 1 ENSG00000143162.7 CREG1 chr1 167529677 167553767 - protein_coding KNOWN OTTHUMG00000034682.1 24091 2688 7 ENSG00000207518.1 RNU6-59P chr13 21551304 21551410 - snRNA KNOWN NA 107 107 1 ENSG00000226525.5 RPS7P10 chr13 21628413 21629015 - processed_pseudogene KNOWN OTTHUMG00000016546.1 603 603 1 ENSG00000102678.6 FGF9 chr13 21671383 21704498 + protein_coding KNOWN OTTHUMG00000017412.2 33116 4539 8 ENSG00000244197.3 RN7SL766P chr13 21790537 21790845 + misc_RNA KNOWN NA 309 309 1 ENSG00000226722.3 LINC00424 chr13 21872770 21878160 - lincRNA NOVEL OTTHUMG00000016547.3 5391 680 4 ENSG00000276476.2 LINC00540 chr13 22040975 22276524 + lincRNA KNOWN OTTHUMG00000187111.3 235550 2721 6 ENSG00000237175.1 NME1P1 chr13 22099163 22099544 - processed_pseudogene KNOWN OTTHUMG00000016549.1 382 382 1 ENSG00000226118.1 MTND3P1 chr13 22113119 22113338 - processed_pseudogene KNOWN OTTHUMG00000016548.1 220 220 1 ENSG00000279282.1 AL354828.1 chr13 22663953 22679652 + protein_coding KNOWN NA 15700 1212 15 ENSG00000280175.1 AL354828.2 chr13 22664217 22675253 - protein_coding KNOWN NA 11037 681 15 ENSG00000231029.2 RP3-455J7.3 chr1 167591392 167591846 + processed_pseudogene KNOWN OTTHUMG00000034683.3 455 455 1 ENSG00000232187.1 FTH1P7 chr13 22696023 22696574 - processed_pseudogene KNOWN OTTHUMG00000016551.1 552 552 1 ENSG00000225777.1 DDX39AP1 chr13 22704739 22706206 - processed_pseudogene KNOWN OTTHUMG00000016550.1 1468 1181 2 ENSG00000253094.1 SNORD36 chr13 22803145 22803224 + snoRNA NOVEL NA 80 80 1 ENSG00000237952.1 RPL7AP73 chr13 22803296 22803648 + processed_pseudogene KNOWN OTTHUMG00000016552.1 353 353 1 ENSG00000226507.1 IPMKP1 chr13 22837026 22837880 - processed_pseudogene KNOWN OTTHUMG00000016553.1 855 855 1 ENSG00000231650.1 RFESDP1 chr13 22850101 22850561 + processed_pseudogene KNOWN OTTHUMG00000016554.1 461 461 1 ENSG00000229556.2 RP11-363G2.4 chr13 22851773 22854138 + lincRNA NOVEL OTTHUMG00000016555.2 2366 2042 2 ENSG00000240341.2 AL162853.1 chr13 22879125 22879199 - miRNA NOVEL NA 75 75 1 ENSG00000262619.1 LINC00621 chr13 22894656 22916369 - lincRNA NOVEL OTTHUMG00000177835.1 21714 1177 3 ENSG00000230535.1 BASP1P1 chr13 22897341 22898005 - processed_pseudogene KNOWN OTTHUMG00000016557.1 665 665 1 ENSG00000241666.2 RP3-455J7.4 chr1 167627385 167630674 - antisense NOVEL OTTHUMG00000035319.2 3290 2523 2 ENSG00000234685.1 NUS1P2 chr13 22915651 22916523 + processed_pseudogene KNOWN OTTHUMG00000016556.3 873 873 1 ENSG00000262198.1 RP11-124N19.3 chr13 22918591 22924602 + lincRNA NOVEL OTTHUMG00000177836.1 6012 585 2 ENSG00000223116.1 AL157931.1 chr13 22977855 22977997 - miRNA NOVEL NA 143 143 1 ENSG00000233440.2 HMGA1P6 chr13 23134174 23134564 + processed_pseudogene KNOWN OTTHUMG00000016558.2 391 391 1 ENSG00000207157.1 RNY3P4 chr13 23152586 23152686 - misc_RNA KNOWN NA 101 101 1 ENSG00000229483.2 LINC00362 chr13 23169835 23170597 - lincRNA NOVEL OTTHUMG00000016559.2 763 264 2 ENSG00000102683.7 SGCG chr13 23180952 23325165 + protein_coding KNOWN OTTHUMG00000016563.1 144214 1624 8 ENSG00000252952.1 RNU6-58P chr13 23217432 23217534 - snRNA KNOWN NA 103 103 1 ENSG00000235205.1 TATDN2P3 chr13 23243520 23247184 + processed_pseudogene KNOWN OTTHUMG00000016560.1 3665 3665 1 ENSG00000236803.1 SDAD1P4 chr13 23267506 23269150 + processed_pseudogene KNOWN OTTHUMG00000016561.1 1645 1645 1 ENSG00000230021.6 RP5-857K21.4 chr1 601436 724707 - lincRNA NOVEL OTTHUMG00000002331.4 123272 1854 17 ENSG00000238199.1 UBE2V2P3 chr1 11278616 11279351 - processed_pseudogene KNOWN OTTHUMG00000002077.1 736 437 2 ENSG00000198771.9 RCSD1 chr1 167630093 167706249 + protein_coding KNOWN OTTHUMG00000035318.1 76157 5718 29 ENSG00000151835.12 SACS chr13 23328823 23433728 - protein_coding KNOWN OTTHUMG00000016562.3 104906 15909 39 ENSG00000232163.2 RPLP1P13 chr13 23373423 23374061 + processed_pseudogene KNOWN OTTHUMG00000016564.2 639 299 2 ENSG00000229558.2 SACS-AS1 chr13 23418971 23428869 + lincRNA NOVEL OTTHUMG00000016565.2 9899 2234 2 ENSG00000232977.5 LINC00327 chr13 23466571 23487464 + lincRNA KNOWN OTTHUMG00000016566.2 20894 3266 7 ENSG00000227893.1 LINC00352 chr13 23498796 23502874 + lincRNA NOVEL OTTHUMG00000016567.1 4079 552 2 ENSG00000127863.14 TNFRSF19 chr13 23570370 23676104 + protein_coding KNOWN OTTHUMG00000016568.3 105735 5113 42 ENSG00000281906.1 AL161422.1 chr13 23698747 23698815 - miRNA NOVEL NA 69 69 1 ENSG00000027001.8 MIPEP chr13 23730189 23889419 - protein_coding KNOWN OTTHUMG00000016573.2 159231 3407 34 ENSG00000232102.1 MTCO3P2 chr13 23765934 23766104 - processed_pseudogene KNOWN OTTHUMG00000016569.1 171 171 1 ENSG00000205861.10 C1QTNF9B-AS1 chr13 23888889 23897263 + antisense NOVEL OTTHUMG00000016571.1 8375 1200 8 ENSG00000197965.10 MPZL1 chr1 167721192 167791919 + protein_coding KNOWN OTTHUMG00000034571.3 70728 7069 42 ENSG00000205863.8 C1QTNF9B chr13 23891099 23902655 - protein_coding KNOWN OTTHUMG00000016570.3 11557 1629 19 ENSG00000196593.8 ANKRD20A19P chr13 23939557 23946782 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000016572.3 7226 2796 11 ENSG00000273167.1 RP11-307N16.6 chr13 23979700 24321031 + protein_coding NOVEL OTTHUMG00000186016.1 341332 4157 16 ENSG00000182957.14 SPATA13 chr13 23979805 24307074 + protein_coding KNOWN OTTHUMG00000016578.10 327270 9948 91 ENSG00000228741.2 SPATA13 chr13 23979810 24035027 + lincRNA NOVEL OTTHUMG00000016574.2 55218 1721 5 ENSG00000225674.1 IPO7P2 chr13 24122065 24123814 - processed_pseudogene KNOWN OTTHUMG00000016575.1 1750 1750 1 ENSG00000252695.1 MIR2276 chr13 24162416 24162504 + miRNA KNOWN NA 89 89 1 ENSG00000227213.1 SPATA13-AS1 chr13 24252749 24254439 - antisense NOVEL OTTHUMG00000016580.1 1691 433 3 ENSG00000240654.5 C1QTNF9 chr13 24307166 24322535 + protein_coding KNOWN OTTHUMG00000016576.2 15370 1893 8 ENSG00000240868.1 C1QTNF9-AS1 chr13 24315725 24321598 - antisense KNOWN OTTHUMG00000016579.1 5874 470 2 ENSG00000143199.16 ADCY10 chr1 167809388 167914215 - protein_coding KNOWN OTTHUMG00000034573.4 104828 6139 113 ENSG00000281899.1 C1QTNF9B-AS1 chr13 24321126 24321428 - protein_coding KNOWN NA 303 303 1 ENSG00000277040.1 RP11-307N16.7 chr13 24323021 24323457 + processed_pseudogene KNOWN OTTHUMG00000187793.1 437 437 1 ENSG00000234627.3 NUS1P3 chr13 24328211 24329072 + processed_pseudogene KNOWN OTTHUMG00000016577.1 862 862 1 ENSG00000261498.1 LINC00566 chr13 24331450 24337121 + lincRNA NOVEL OTTHUMG00000175964.1 5672 570 2 ENSG00000233545.1 CYCSP33 chr13 24400703 24401029 + processed_pseudogene KNOWN OTTHUMG00000016581.3 327 327 1 ENSG00000205822.9 TPTE2P6 chr13 24408157 24597676 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000016586.1 189520 1816 19 ENSG00000102699.5 PARP4 chr13 24420926 24512810 - protein_coding KNOWN OTTHUMG00000016582.2 91885 6080 40 ENSG00000266216.1 AL359538.2 chr13 24555228 24555313 - miRNA NOVEL NA 86 86 1 ENSG00000244615.1 PSPC1P2 chr13 24566843 24570728 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000016585.1 3886 225 2 ENSG00000243008.2 RP11-556N21.1 chr13 24566873 24597676 + processed_transcript NOVEL OTTHUMG00000186395.1 30804 1710 13 ENSG00000250762.1 RP1-313L4.4 chr1 167819898 167820248 - unprocessed_pseudogene KNOWN OTTHUMG00000057607.1 351 266 2 ENSG00000211508.1 AL359538.1 chr13 24609079 24609175 + miRNA NOVEL NA 97 97 1 ENSG00000075673.10 ATP12A chr13 24680411 24712493 + protein_coding KNOWN OTTHUMG00000016588.2 32083 4442 46 ENSG00000207474.1 RNY1P7 chr13 24703556 24703665 - misc_RNA KNOWN NA 110 110 1 ENSG00000225404.2 RPL26P34 chr13 24704338 24704788 - processed_pseudogene KNOWN OTTHUMG00000016587.2 451 451 1 ENSG00000231417.2 IRX1P1 chr13 24742677 24746184 + unprocessed_pseudogene KNOWN OTTHUMG00000016590.2 3508 1838 5 ENSG00000226695.1 ANKRD20A10P chr13 24750657 24752171 - processed_pseudogene KNOWN OTTHUMG00000016591.1 1515 1515 1 ENSG00000132972.17 RNF17 chr13 24764152 24879921 + protein_coding KNOWN OTTHUMG00000016589.4 115770 5634 99 ENSG00000151849.13 CENPJ chr13 24882284 24922889 - protein_coding KNOWN OTTHUMG00000016595.1 40606 5812 62 ENSG00000253771.4 TPTE2P1 chr13 24924677 24968487 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000016596.2 43811 1709 20 ENSG00000273628.1 RP11-756A22.7 chr13 24933006 24936796 + unprocessed_pseudogene KNOWN OTTHUMG00000187794.1 3791 329 2 ENSG00000232194.1 RP1-313L4.3 chr1 167820406 167821224 + antisense NOVEL OTTHUMG00000040771.1 819 718 2 ENSG00000251299.1 SLC25A15P3 chr13 24943575 24944498 + unprocessed_pseudogene KNOWN OTTHUMG00000016593.1 924 290 2 ENSG00000232858.1 RPL34P27 chr13 24988577 24988925 - processed_pseudogene KNOWN OTTHUMG00000016594.1 349 349 1 ENSG00000269099.2 RP11-458I4.1 chr13 25017404 25017536 + processed_pseudogene KNOWN OTTHUMG00000186973.1 133 133 1 ENSG00000276958.1 RP11-458I4.2 chr13 25017766 25017903 - unprocessed_pseudogene KNOWN OTTHUMG00000187795.1 138 138 1 ENSG00000151846.8 PABPC3 chr13 25095868 25099254 + protein_coding KNOWN OTTHUMG00000016601.5 3387 3387 1 ENSG00000279695.1 RP11-165I9.10 chr13 25141536 25141809 + TEC KNOWN OTTHUMG00000186835.1 274 274 1 ENSG00000165566.12 AMER2 chr13 25161684 25172288 - protein_coding KNOWN OTTHUMG00000016602.3 10605 10605 4 ENSG00000234056.1 LINC00463 chr13 25172828 25180079 - lincRNA NOVEL OTTHUMG00000016604.1 7252 1147 4 ENSG00000238169.1 LINC01053 chr13 25181441 25189760 + antisense NOVEL OTTHUMG00000016605.1 8320 771 3 ENSG00000279550.1 RP11-165I9.9 chr13 25190063 25190317 - TEC KNOWN OTTHUMG00000175967.1 255 255 1 ENSG00000143158.9 MPC2 chr1 167916729 167937040 - protein_coding KNOWN OTTHUMG00000034570.2 20312 2552 16 ENSG00000225105.2 LINC01076 chr13 25193107 25210295 - lincRNA NOVEL OTTHUMG00000016599.2 17189 302 2 ENSG00000235315.2 RPL23AP69 chr13 25206049 25206506 + processed_pseudogene KNOWN OTTHUMG00000016600.2 458 458 1 ENSG00000139505.11 MTMR6 chr13 25246201 25288009 - protein_coding KNOWN OTTHUMG00000016606.1 41809 5779 17 ENSG00000221324.1 AL590787.1 chr13 25246531 25246615 + miRNA NOVEL NA 85 85 1 ENSG00000260509.2 RP11-271M24.2 chr13 25300124 25301438 - lincRNA NOVEL OTTHUMG00000175969.2 1315 1315 1 ENSG00000139496.14 NUPL1 chr13 25301524 25349800 + protein_coding KNOWN OTTHUMG00000016608.4 48277 10422 117 ENSG00000234152.1 TCEB2P1 chr13 25365799 25366155 - processed_pseudogene KNOWN OTTHUMG00000016607.1 357 357 1 ENSG00000132932.15 ATP8A2 chr13 25372071 26025851 + protein_coding KNOWN OTTHUMG00000016611.5 653781 10415 131 ENSG00000199767.1 RNU6-78P chr13 25517119 25517225 + snRNA KNOWN NA 107 107 1 ENSG00000180803.3 RP11-467D10.2 chr13 25863250 25863667 - processed_pseudogene KNOWN OTTHUMG00000016609.1 418 418 1 ENSG00000143164.14 DCAF6 chr1 167935783 168075843 + protein_coding KNOWN OTTHUMG00000034572.6 140061 6306 129 ENSG00000242381.3 RN7SL741P chr13 25944478 25944766 + misc_RNA KNOWN NA 289 289 1 ENSG00000281497.1 AL138815.1 chr13 25944606 25944673 + miRNA NOVEL NA 68 68 1 ENSG00000223158.1 RNY1P3 chr13 25950704 25950821 - misc_RNA KNOWN NA 118 118 1 ENSG00000180730.4 SHISA2 chr13 26044597 26051031 - protein_coding KNOWN OTTHUMG00000016612.2 6435 2860 2 ENSG00000231983.1 LINC00415 chr13 26052276 26053385 - lincRNA NOVEL OTTHUMG00000016610.1 1110 435 2 ENSG00000233963.1 ATP8A2P3 chr13 26114409 26154175 - unprocessed_pseudogene KNOWN OTTHUMG00000016613.1 39767 1433 16 ENSG00000234706.1 PRUNEP1 chr13 26117548 26118964 - processed_pseudogene KNOWN OTTHUMG00000016615.1 1417 705 3 ENSG00000127870.15 RNF6 chr13 26132115 26222493 - protein_coding KNOWN OTTHUMG00000016614.4 90379 4621 31 ENSG00000277368.1 RP11-380N8.7 chr13 26222191 26222654 + antisense NOVEL OTTHUMG00000188838.1 464 464 1 ENSG00000271559.1 RP11-380N8.6 chr13 26229332 26229644 - processed_pseudogene KNOWN OTTHUMG00000184713.1 313 313 1 ENSG00000221545.1 MIR1255B2 chr1 167998660 167998726 + miRNA KNOWN NA 67 67 1 ENSG00000227882.1 PRKRIRP6 chr13 26234213 26237129 + processed_pseudogene KNOWN OTTHUMG00000016616.1 2917 2310 3 ENSG00000132964.10 CDK8 chr13 26254104 26405238 + protein_coding KNOWN OTTHUMG00000016617.3 151135 3538 46 ENSG00000278413.1 uc_338 chr13 26359529 26359702 - misc_RNA NOVEL NA 174 174 1 ENSG00000132970.11 WASF3 chr13 26557703 26688948 + protein_coding KNOWN OTTHUMG00000016621.1 131246 5162 26 ENSG00000234031.1 RPS3AP44 chr13 26576886 26577675 + processed_pseudogene KNOWN OTTHUMG00000016618.1 790 790 1 ENSG00000237001.5 WASF3-AS1 chr13 26606544 26641364 - antisense NOVEL OTTHUMG00000016619.3 34821 3040 22 ENSG00000132975.7 GPR12 chr13 26755200 26760785 - protein_coding KNOWN OTTHUMG00000016620.3 5586 5298 3 ENSG00000230256.1 FGFR1OP2P1 chr13 26905362 26905861 + processed_pseudogene KNOWN OTTHUMG00000016622.1 500 500 1 ENSG00000223782.1 RPS21P8 chr13 26977543 26977789 + processed_pseudogene KNOWN OTTHUMG00000016623.1 247 247 1 ENSG00000218198.3 RPS20P32 chr13 27017554 27017909 - processed_pseudogene KNOWN OTTHUMG00000016624.1 356 356 1 ENSG00000224837.1 GCSHP5 chr1 168055901 168056422 - processed_pseudogene KNOWN OTTHUMG00000034577.1 522 522 1 ENSG00000152484.12 USP12 chr13 27066142 27171896 - protein_coding KNOWN OTTHUMG00000016626.4 105755 5195 14 ENSG00000278496.1 RP11-144H23.2 chr13 27077218 27077962 + unprocessed_pseudogene KNOWN OTTHUMG00000187796.1 745 745 1 ENSG00000232162.1 USP12-AS1 chr13 27162855 27169135 + antisense NOVEL OTTHUMG00000016625.1 6281 268 2 ENSG00000230641.1 USP12-AS2 chr13 27172259 27182998 + antisense NOVEL OTTHUMG00000016628.1 10740 279 2 ENSG00000275294.3 RP11-428O18.6 chr13 27178263 27251288 - lincRNA NOVEL OTTHUMG00000187177.1 73026 1098 10 ENSG00000234772.1 LINC00412 chr13 27236282 27236811 - antisense NOVEL OTTHUMG00000016629.1 530 420 2 ENSG00000122026.9 RPL21 chr13 27251309 27256691 + protein_coding KNOWN OTTHUMG00000016630.5 5383 2249 47 ENSG00000207500.1 SNORD102 chr13 27255064 27255135 + snoRNA KNOWN NA 72 72 1 ENSG00000207051.1 SNORA27 chr13 27255401 27255526 + snoRNA KNOWN NA 126 126 1 ENSG00000122035.6 RASL11A chr13 27270327 27273690 + protein_coding KNOWN OTTHUMG00000016627.2 3364 1624 10 ENSG00000143147.13 GPR161 chr1 168079543 168137667 - protein_coding KNOWN OTTHUMG00000034651.4 58125 11224 52 ENSG00000221756.1 AL159977.1 chr13 27320013 27320159 + miRNA NOVEL NA 147 147 1 ENSG00000252247.2 RNU6-70P chr13 27343687 27343746 - snRNA KNOWN NA 60 60 1 ENSG00000229609.1 LINC01079 chr13 27373348 27374366 + lincRNA NOVEL OTTHUMG00000016631.1 1019 580 2 ENSG00000201242.1 RNY1P1 chr13 27402476 27402587 - misc_RNA KNOWN NA 112 112 1 ENSG00000122034.11 GTF3A chr13 27424544 27435823 + protein_coding KNOWN OTTHUMG00000016632.3 11280 3001 64 ENSG00000122033.13 MTIF3 chr13 27435643 27450591 - protein_coding KNOWN OTTHUMG00000016633.2 14949 1603 51 ENSG00000252499.1 RNU6-63P chr13 27488138 27488232 + snRNA KNOWN NA 95 95 1 ENSG00000139517.7 LNX2 chr13 27545911 27620404 - protein_coding KNOWN OTTHUMG00000016634.3 74494 4627 10 ENSG00000186184.14 POLR1D chr13 27620742 27667415 + protein_coding KNOWN OTTHUMG00000016635.5 46674 6425 30 ENSG00000273552.1 RP11-87C7.3 chr13 27667540 27680566 - lincRNA NOVEL OTTHUMG00000187184.1 13027 862 3 ENSG00000224338.2 RP11-149P14.1 chr1 11425257 11425821 - processed_pseudogene KNOWN OTTHUMG00000002073.2 565 565 1 ENSG00000143155.11 TIPRL chr1 168178933 168202114 + protein_coding KNOWN OTTHUMG00000034646.2 23182 3220 12 ENSG00000226703.1 NPM1P4 chr13 27696393 27697204 - processed_pseudogene KNOWN OTTHUMG00000016636.1 812 812 1 ENSG00000169840.4 GSX1 chr13 27792643 27794768 + protein_coding KNOWN OTTHUMG00000016637.2 2126 1663 2 ENSG00000207330.1 RNU6-73P chr13 27828763 27828869 + snRNA KNOWN NA 107 107 1 ENSG00000247381.2 PDX1-AS1 chr13 27833444 27921404 - antisense NOVEL OTTHUMG00000170578.1 87961 1477 3 ENSG00000139515.5 PDX1 chr13 27920020 27926231 + protein_coding KNOWN OTTHUMG00000016638.2 6212 2501 2 ENSG00000180389.6 ATP5EP2 chr13 27945206 27945590 + protein_coding KNOWN OTTHUMG00000016642.1 385 385 1 ENSG00000260704.1 LINC00543 chr13 27953526 27955370 + lincRNA KNOWN OTTHUMG00000170880.1 1845 1845 1 ENSG00000165556.9 CDX2 chr13 27962137 27971139 - protein_coding KNOWN OTTHUMG00000016640.5 9003 4122 6 ENSG00000183463.5 URAD chr13 27977714 27988654 - protein_coding KNOWN OTTHUMG00000186217.1 10941 931 2 ENSG00000242360.3 RN7SL272P chr13 27989296 27989584 - misc_RNA KNOWN NA 289 289 1 ENSG00000237049.1 RPL34P1 chr1 168210616 168210969 + processed_pseudogene KNOWN OTTHUMG00000034647.1 354 354 1 ENSG00000122025.13 FLT3 chr13 28003274 28100592 - protein_coding KNOWN OTTHUMG00000016646.3 97319 4159 52 ENSG00000271026.1 KATNBL1P1 chr13 28067587 28068334 + processed_pseudogene KNOWN OTTHUMG00000184858.1 748 748 1 ENSG00000235115.3 CHCHD2P8 chr13 28107431 28107877 + processed_pseudogene KNOWN OTTHUMG00000016643.1 447 447 1 ENSG00000261485.1 PAN3-AS1 chr13 28136843 28138193 - antisense NOVEL OTTHUMG00000175971.1 1351 1351 1 ENSG00000152520.12 PAN3 chr13 28138506 28295335 + protein_coding KNOWN OTTHUMG00000016645.5 156830 6352 53 ENSG00000232587.1 EEF1A1P3 chr13 28214513 28215897 + processed_pseudogene KNOWN OTTHUMG00000016644.1 1385 1385 1 ENSG00000200840.1 RNU6-82P chr13 28232501 28232607 + snRNA KNOWN NA 107 107 1 ENSG00000102755.9 FLT1 chr13 28300344 28495128 - protein_coding KNOWN OTTHUMG00000016648.4 194785 12550 112 ENSG00000279393.1 RP11-95G6.1 chr13 28495633 28497267 + TEC KNOWN OTTHUMG00000175973.1 1635 1635 1 ENSG00000235472.1 EIF4A1P7 chr13 28598833 28600052 + processed_pseudogene KNOWN OTTHUMG00000016649.1 1220 1220 1 ENSG00000237131.1 RP1-69E11.3 chr1 168215405 168215652 + processed_pseudogene KNOWN OTTHUMG00000034649.1 248 248 1 ENSG00000273964.1 Y_RNA chr13 28629794 28629883 + misc_RNA NOVEL NA 90 90 1 ENSG00000132963.7 POMP chr13 28659104 28678925 + protein_coding KNOWN OTTHUMG00000016652.1 19822 1428 13 ENSG00000139508.13 SLC46A3 chr13 28700064 28718970 - protein_coding KNOWN OTTHUMG00000016650.3 18907 3776 15 ENSG00000202237.1 RNU6-53P chr13 28703702 28703807 - snRNA KNOWN NA 106 106 1 ENSG00000233588.1 CYP51A1P2 chr13 28722386 28724021 - processed_pseudogene KNOWN OTTHUMG00000016651.1 1636 1499 2 ENSG00000277227.1 RP11-161P17.2 chr13 28778224 28778448 - unprocessed_pseudogene KNOWN OTTHUMG00000187797.1 225 225 1 ENSG00000236339.1 POM121L13P chr13 28778558 28778937 + processed_pseudogene KNOWN OTTHUMG00000016653.1 380 380 1 ENSG00000132938.17 MTUS2 chr13 28820348 29505947 + protein_coding KNOWN OTTHUMG00000016657.5 685600 8445 57 ENSG00000221670.1 AL596092.1 chr13 29222562 29222641 + miRNA NOVEL NA 80 80 1 ENSG00000236758.4 MTUS2-AS2 chr13 29239379 29250554 - antisense NOVEL OTTHUMG00000016655.1 11176 1059 8 ENSG00000213064.8 SFT2D2 chr1 168225938 168253025 + protein_coding KNOWN OTTHUMG00000034650.3 27088 11221 28 ENSG00000223460.1 GAPDHP69 chr13 29306778 29307785 + processed_pseudogene KNOWN OTTHUMG00000016654.2 1008 1008 1 ENSG00000270680.1 RP11-351N4.4 chr13 29339566 29339869 - processed_pseudogene KNOWN OTTHUMG00000184714.1 304 304 1 ENSG00000179141.8 MTUS2-AS1 chr13 29476515 29490105 - antisense NOVEL OTTHUMG00000016656.4 13591 2567 10 ENSG00000139514.11 SLC7A1 chr13 29509410 29595688 - protein_coding KNOWN OTTHUMG00000016658.3 86279 7692 19 ENSG00000122042.9 UBL3 chr13 29764371 29850684 - protein_coding KNOWN OTTHUMG00000016661.1 86314 4384 5 ENSG00000277180.1 AL139188.1 chr13 29864111 29864187 - miRNA NOVEL NA 77 77 1 ENSG00000278172.1 Metazoa_SRP chr13 29864372 29864629 - misc_RNA NOVEL NA 258 258 1 ENSG00000236258.1 TIMM8BP1 chr13 29865959 29866169 - processed_pseudogene KNOWN OTTHUMG00000016660.1 211 211 1 ENSG00000224329.2 LINC00297 chr13 29872613 29888405 - lincRNA NOVEL OTTHUMG00000147351.2 15793 913 2 ENSG00000224405.1 LINC00572 chr13 29918647 29926651 - antisense NOVEL OTTHUMG00000016662.1 8005 575 2 ENSG00000214262.4 ANKRD36BP1 chr1 168245565 168247343 - transcribed_processed_pseudogene KNOWN OTTHUMG00000040770.2 1779 1779 2 ENSG00000122043.9 LINC00544 chr13 29935905 29950488 + lincRNA KNOWN OTTHUMG00000016659.3 14584 1502 8 ENSG00000266505.1 RP11-629E24.2 chr13 30022021 30023800 - lincRNA NOVEL OTTHUMG00000055980.1 1780 1780 1 ENSG00000224511.1 LINC00365 chr13 30103178 30108875 - lincRNA NOVEL OTTHUMG00000016663.2 5698 2998 4 ENSG00000232117.1 LINC00384 chr13 30151886 30159621 - lincRNA NOVEL OTTHUMG00000055982.1 7736 6852 2 ENSG00000232643.1 LINC00385 chr13 30154066 30154586 + lincRNA NOVEL OTTHUMG00000016664.1 521 374 2 ENSG00000279499.1 RP11-490N5.3 chr13 30196443 30196881 - TEC KNOWN OTTHUMG00000055979.1 439 439 1 ENSG00000102781.12 KATNAL1 chr13 30202630 30307484 - protein_coding KNOWN OTTHUMG00000016665.3 104855 8105 32 ENSG00000266816.1 AL356750.1 chr13 30206616 30206699 - miRNA NOVEL NA 84 84 1 ENSG00000252928.1 RNU6-64P chr13 30281765 30281869 + snRNA KNOWN NA 105 105 1 ENSG00000215049.3 PRDX2P1 chr13 30296147 30296735 + processed_pseudogene KNOWN OTTHUMG00000016666.2 589 589 1 ENSG00000206880.1 RNU6-1310P chr1 168263375 168263481 - snRNA KNOWN NA 107 107 1 ENSG00000236463.1 LINC00427 chr13 30316360 30319903 - lincRNA NOVEL OTTHUMG00000016667.2 3544 430 2 ENSG00000238121.4 LINC00426 chr13 30340270 30377145 - lincRNA NOVEL OTTHUMG00000016668.4 36876 3972 39 ENSG00000279149.1 RP11-374F3.5 chr13 30344672 30347167 + TEC KNOWN OTTHUMG00000187210.1 2496 2496 1 ENSG00000225039.1 LINC01058 chr13 30419519 30422237 - lincRNA NOVEL OTTHUMG00000055981.1 2719 448 2 ENSG00000236444.3 UBE2L5P chr13 30427991 30428455 + processed_pseudogene KNOWN OTTHUMG00000016669.2 465 465 1 ENSG00000189403.13 HMGB1 chr13 30456704 30617597 - protein_coding KNOWN OTTHUMG00000016670.7 160894 7723 34 ENSG00000213411.2 RBM22P2 chr13 30539597 30543461 - processed_pseudogene KNOWN OTTHUMG00000016672.1 3865 1814 2 ENSG00000232489.1 MFAP1P1 chr13 30541643 30542897 - processed_pseudogene KNOWN OTTHUMG00000016673.1 1255 1255 1 ENSG00000224117.1 PTPN2P2 chr13 30553670 30554693 + processed_pseudogene KNOWN OTTHUMG00000016674.1 1024 1024 1 ENSG00000132952.10 USPL1 chr13 30617693 30660770 + protein_coding KNOWN OTTHUMG00000016675.3 43078 5125 19 ENSG00000143178.11 TBX19 chr1 168281040 168314426 + protein_coding KNOWN OTTHUMG00000034648.2 33387 3647 21 ENSG00000275788.1 Metazoa_SRP chr13 30684029 30684278 - misc_RNA NOVEL NA 250 250 1 ENSG00000132965.8 ALOX5AP chr13 30713478 30764426 + protein_coding KNOWN OTTHUMG00000016677.2 50949 1715 13 ENSG00000237879.1 LINC00398 chr13 30803206 30810645 + lincRNA NOVEL OTTHUMG00000016676.1 7440 906 2 ENSG00000224743.5 TEX26-AS1 chr13 30881933 30933846 - antisense NOVEL OTTHUMG00000016681.3 51914 6510 53 ENSG00000236094.1 LINC00545 chr13 30882551 30883395 + lincRNA NOVEL OTTHUMG00000016678.1 845 411 2 ENSG00000102802.8 MEDAG chr13 30906191 30925572 + protein_coding KNOWN OTTHUMG00000016679.1 19382 2374 9 ENSG00000175664.8 TEX26 chr13 30932703 30975502 + protein_coding KNOWN OTTHUMG00000016682.2 42800 1660 17 ENSG00000238185.1 RP11-252M21.6 chr13 30973289 30977623 - antisense NOVEL OTTHUMG00000016683.1 4335 337 3 ENSG00000230403.1 LINC01066 chr13 30995162 30996138 - lincRNA NOVEL OTTHUMG00000016684.1 977 399 2 ENSG00000231894.1 WDR95P chr13 31077254 31115699 + unitary_pseudogene KNOWN OTTHUMG00000016687.2 38446 1082 13 ENSG00000227722.1 RP5-1059H15.1 chr1 168369054 168369601 + processed_pseudogene KNOWN OTTHUMG00000034643.1 548 548 1 ENSG00000120694.18 HSPH1 chr13 31134974 31162388 - protein_coding KNOWN OTTHUMG00000016685.5 27415 8390 107 ENSG00000187676.7 B3GALTL chr13 31199936 31332276 + protein_coding KNOWN OTTHUMG00000016688.4 132341 4566 22 ENSG00000229427.1 ANKRD26P4 chr13 31311289 31312921 + processed_pseudogene KNOWN OTTHUMG00000016689.1 1633 950 2 ENSG00000278305.1 RP11-326L9.1 chr13 31419989 31437999 + lincRNA NOVEL OTTHUMG00000187248.1 18011 565 3 ENSG00000277319.1 RP11-326L9.2 chr13 31483414 31483699 - unprocessed_pseudogene KNOWN OTTHUMG00000187799.1 286 286 1 ENSG00000133105.6 RXFP2 chr13 31739542 31803388 + protein_coding KNOWN OTTHUMG00000016690.2 63847 3319 35 ENSG00000229715.4 EEF1DP3 chr13 31846841 31953472 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000016691.3 106632 3645 6 ENSG00000279314.1 RP1-257C22.2 chr13 31960325 31961946 - TEC KNOWN OTTHUMG00000175978.1 1622 1622 1 ENSG00000278732.1 Metazoa_SRP chr13 31975167 31975448 + misc_RNA NOVEL NA 282 282 1 ENSG00000235822.1 LINC01073 chr13 31985685 31990997 + lincRNA NOVEL OTTHUMG00000153574.1 5313 149 2 ENSG00000207974.1 MIR557 chr1 168375524 168375621 + miRNA KNOWN NA 98 98 1 ENSG00000237637.1 FRY-AS1 chr13 32025314 32031639 - antisense NOVEL OTTHUMG00000016692.1 6326 1115 4 ENSG00000073910.18 FRY chr13 32031300 32299122 + protein_coding KNOWN OTTHUMG00000016696.5 267823 18452 147 ENSG00000189167.10 ZAR1L chr13 32303700 32315344 - protein_coding KNOWN OTTHUMG00000016694.5 11645 1564 10 ENSG00000139618.13 BRCA2 chr13 32315474 32400266 + protein_coding KNOWN OTTHUMG00000017411.7 84793 12273 93 ENSG00000215515.2 IFIT1P1 chr13 32384660 32386108 + processed_pseudogene KNOWN OTTHUMG00000016693.1 1449 1449 1 ENSG00000139597.15 N4BP2L1 chr13 32400723 32428178 - protein_coding KNOWN OTTHUMG00000016697.6 27456 5639 49 ENSG00000212293.1 SNORA16 chr13 32420390 32420516 - snoRNA NOVEL NA 127 127 1 ENSG00000270008.1 RP11-298P3.4 chr13 32425358 32432954 - processed_transcript NOVEL OTTHUMG00000016701.2 7597 764 2 ENSG00000244754.7 N4BP2L2 chr13 32432417 32538885 - protein_coding KNOWN OTTHUMG00000016700.5 106469 16960 89 ENSG00000229800.1 ATP8A2P2 chr13 32477274 32478841 + processed_pseudogene KNOWN OTTHUMG00000016698.1 1568 1568 1 ENSG00000228697.1 RP5-968D22.1 chr1 168400829 168422656 - lincRNA NOVEL OTTHUMG00000034644.2 21828 1837 7 ENSG00000281026.1 N4BP2L2-IT2 chr13 32504506 32509395 - sense_intronic KNOWN OTTHUMG00000189577.1 4890 4890 1 ENSG00000083642.17 PDS5B chr13 32586427 32778019 + protein_coding KNOWN OTTHUMG00000016704.4 191593 13212 102 ENSG00000207325.1 RNY1P4 chr13 32763438 32763552 - misc_RNA KNOWN NA 115 115 1 ENSG00000277151.1 RP11-380B4.3 chr13 32782874 32788178 + lincRNA NOVEL OTTHUMG00000187329.1 5305 5305 1 ENSG00000226968.1 LINC00423 chr13 32877431 32911650 - lincRNA NOVEL OTTHUMG00000016703.1 34220 903 4 ENSG00000227604.3 TOMM22P3 chr13 32954057 32954401 - processed_pseudogene KNOWN OTTHUMG00000016705.2 345 345 1 ENSG00000133116.7 KL chr13 33016433 33066145 + protein_coding KNOWN OTTHUMG00000017408.1 49713 5056 10 ENSG00000221677.2 AL161898.1 chr13 33041352 33041443 + miRNA NOVEL NA 92 92 1 ENSG00000133121.19 STARD13 chr13 33103135 33350630 - protein_coding KNOWN OTTHUMG00000016708.6 247496 8388 63 ENSG00000230300.1 STARD13-IT1 chr13 33158587 33164409 - sense_intronic NOVEL OTTHUMG00000016706.1 5823 452 2 ENSG00000204624.7 PTCHD2 chr1 11479166 11537584 + protein_coding KNOWN OTTHUMG00000002074.2 58419 6142 28 ENSG00000215833.3 QRSL1P1 chr1 168449672 168451211 - processed_pseudogene KNOWN OTTHUMG00000034645.2 1540 1540 1 ENSG00000236581.7 STARD13-AS chr13 33180401 33281584 + processed_transcript NOVEL OTTHUMG00000016710.6 101184 4005 204 ENSG00000277160.1 AL139187.1 chr13 33203171 33203223 + miRNA NOVEL NA 53 53 1 ENSG00000227911.3 RP11-141M1.1 chr13 33333679 33335277 - lincRNA NOVEL OTTHUMG00000016711.3 1599 644 2 ENSG00000277386.1 RP11-141M1.4 chr13 33336216 33336716 - sense_intronic NOVEL OTTHUMG00000187330.1 501 501 1 ENSG00000264288.1 AL138999.1 chr13 33336883 33336972 - miRNA NOVEL NA 90 90 1 ENSG00000230490.2 RP11-141M1.3 chr13 33355206 33676768 - lincRNA NOVEL OTTHUMG00000016714.2 321563 1535 13 ENSG00000277992.1 AL139383.1 chr13 33378468 33378566 - miRNA NOVEL NA 99 99 1 ENSG00000234535.1 RP11-37L2.1 chr13 33610967 33611522 + lincRNA NOVEL OTTHUMG00000016713.1 556 385 2 ENSG00000232986.1 RP11-179A7.2 chr13 33657436 33659928 + lincRNA NOVEL OTTHUMG00000016716.1 2493 382 3 ENSG00000133119.11 RFC3 chr13 33818049 33966558 + protein_coding KNOWN OTTHUMG00000016715.3 148510 2874 22 ENSG00000237658.1 RP5-968D22.3 chr1 168464214 168495644 - lincRNA NOVEL OTTHUMG00000040769.1 31431 519 5 ENSG00000252397.1 RNU5A-4P chr13 33829539 33829649 - snRNA KNOWN NA 111 111 1 ENSG00000276672.1 RP11-142E9.1 chr13 33846190 33850825 + sense_intronic NOVEL OTTHUMG00000187333.1 4636 4636 1 ENSG00000263663.1 AL161891.1 chr13 33911992 33912081 + miRNA NOVEL NA 90 90 1 ENSG00000280431.1 RP11-218I21.2 chr13 34079411 34080134 + TEC KNOWN OTTHUMG00000175979.1 724 724 1 ENSG00000227254.1 VDAC1P12 chr13 34082429 34083310 - processed_pseudogene KNOWN OTTHUMG00000016717.1 882 882 1 ENSG00000199196.1 SNORA25 chr13 34100711 34100838 - snoRNA NOVEL NA 128 128 1 ENSG00000278477.1 RP11-282M24.1 chr13 34262863 34263090 + unprocessed_pseudogene KNOWN OTTHUMG00000187800.1 228 228 1 ENSG00000271850.1 RP11-16D22.2 chr13 34348043 34614170 + lincRNA NOVEL OTTHUMG00000185756.1 266128 573 4 ENSG00000225179.1 LINC00457 chr13 34435450 34640685 - lincRNA NOVEL OTTHUMG00000016718.1 205236 744 5 ENSG00000271901.1 RP11-266E6.3 chr13 34545929 34671182 - lincRNA NOVEL OTTHUMG00000185731.1 125254 273 2 ENSG00000143185.3 XCL2 chr1 168540765 168543997 - protein_coding KNOWN OTTHUMG00000034549.1 3233 565 3 ENSG00000231910.1 GAMTP2 chr13 34574204 34574666 - processed_pseudogene KNOWN OTTHUMG00000016719.1 463 463 1 ENSG00000273886.1 Metazoa_SRP chr13 34910545 34910815 - misc_RNA NOVEL NA 271 271 1 ENSG00000261728.1 RP11-307O13.1 chr13 34925834 34928076 - lincRNA NOVEL OTTHUMG00000175980.1 2243 2243 1 ENSG00000172915.17 NBEA chr13 34942287 35673022 + protein_coding KNOWN OTTHUMG00000016724.2 730736 11949 267 ENSG00000232795.1 SCAND3P1 chr13 35185294 35186679 + processed_pseudogene KNOWN OTTHUMG00000016721.1 1386 1060 2 ENSG00000234835.1 PHBP13 chr13 35251070 35251829 + processed_pseudogene KNOWN OTTHUMG00000016722.1 760 760 1 ENSG00000180660.7 MAB21L1 chr13 35474182 35477209 - protein_coding KNOWN OTTHUMG00000016723.3 3028 3028 1 ENSG00000221519.2 AL390071.1 chr13 35494428 35494519 + miRNA NOVEL NA 92 92 1 ENSG00000236036.1 LINC00445 chr13 35697524 35699256 + lincRNA NOVEL OTTHUMG00000016726.1 1733 756 4 ENSG00000133083.13 DCLK1 chr13 35768652 36131306 - protein_coding KNOWN OTTHUMG00000016729.3 362655 14375 76 ENSG00000227777.1 RP4-738P11.3 chr1 168542737 168543354 + processed_pseudogene KNOWN OTTHUMG00000034552.1 618 618 1 ENSG00000120669.14 SOHLH2 chr13 36168208 36214615 - protein_coding KNOWN OTTHUMG00000016728.3 46408 3399 18 ENSG00000250709.1 CCDC169-SOHLH2 chr13 36168794 36297842 - protein_coding KNOWN OTTHUMG00000162258.2 129049 2051 16 ENSG00000242715.6 CCDC169 chr13 36222008 36297840 - protein_coding KNOWN OTTHUMG00000016731.3 75833 8837 83 ENSG00000207203.1 RNU6-71P chr13 36267168 36267274 + snRNA KNOWN NA 107 107 1 ENSG00000133104.11 SPG20 chr13 36301638 36370180 - protein_coding KNOWN OTTHUMG00000016730.4 68543 6387 62 ENSG00000120664.9 SPG20-AS1 chr13 36346431 36369601 + antisense KNOWN OTTHUMG00000016732.3 23171 710 15 ENSG00000266047.1 AL139377.1 chr13 36355791 36355878 + miRNA NOVEL NA 88 88 1 ENSG00000133101.8 CCNA1 chr13 36431520 36442882 + protein_coding KNOWN OTTHUMG00000016733.3 11363 2400 36 ENSG00000223383.1 HIST1H2APS6 chr13 36490078 36490441 - processed_pseudogene KNOWN OTTHUMG00000016734.1 364 364 1 ENSG00000180440.3 SERTM1 chr13 36673912 36697839 + protein_coding KNOWN OTTHUMG00000016735.2 23928 3207 2 ENSG00000143184.4 XCL1 chr1 168576473 168582077 + protein_coding KNOWN OTTHUMG00000034548.1 5605 1367 3 ENSG00000222602.1 AL136160.1 chr13 36728602 36728692 - miRNA NOVEL NA 91 91 1 ENSG00000235306.2 GAPDHP34 chr13 36740041 36740863 + processed_pseudogene KNOWN OTTHUMG00000016736.2 823 823 1 ENSG00000223543.1 TCEAL4P1 chr13 36741878 36742465 - processed_pseudogene KNOWN OTTHUMG00000016737.1 588 588 1 ENSG00000215486.5 ARL2BPP3 chr13 36789332 36795050 + transcribed_processed_pseudogene KNOWN OTTHUMG00000016739.3 5719 751 5 ENSG00000271337.1 NDE1P2 chr13 36804198 36805302 - processed_pseudogene KNOWN OTTHUMG00000184715.1 1105 1105 1 ENSG00000133111.3 RFXAP chr13 36819224 36829104 + protein_coding KNOWN OTTHUMG00000016738.1 9881 2306 7 ENSG00000120693.12 SMAD9 chr13 36844831 36920765 - protein_coding KNOWN OTTHUMG00000016740.2 75935 5723 21 ENSG00000236711.2 SMAD9-IT1 chr13 36849366 36850046 - sense_intronic NOVEL OTTHUMG00000016743.2 681 504 2 ENSG00000228825.1 LAMTOR3P1 chr13 36922539 36922908 + processed_pseudogene KNOWN OTTHUMG00000016745.1 370 370 1 ENSG00000232378.1 RPL29P28 chr13 36926438 36927219 - processed_pseudogene KNOWN OTTHUMG00000016746.2 782 472 2 ENSG00000229757.2 RP4-738P11.4 chr1 168578653 168579439 - processed_pseudogene KNOWN OTTHUMG00000034553.3 787 787 1 ENSG00000226161.1 EIF4A1P5 chr13 36938400 36939494 - processed_pseudogene KNOWN OTTHUMG00000016744.1 1095 1095 1 ENSG00000120697.7 ALG5 chr13 36949775 37000261 - protein_coding KNOWN OTTHUMG00000016741.2 50487 2194 30 ENSG00000120699.11 EXOSC8 chr13 36998816 37009613 + protein_coding KNOWN OTTHUMG00000016742.4 10798 3630 82 ENSG00000102710.18 SUPT20H chr13 37009312 37059713 - protein_coding KNOWN OTTHUMG00000016747.5 50402 10933 311 ENSG00000279238.1 AL138706.2 chr13 37020528 37020772 + protein_coding KNOWN NA 245 57 2 ENSG00000221100.1 AL138706.1 chr13 37034677 37034792 - miRNA NOVEL NA 116 116 1 ENSG00000180138.7 CSNK1A1L chr13 37103259 37105664 - protein_coding KNOWN OTTHUMG00000016748.1 2406 2406 1 ENSG00000274549.1 RP11-676B18.2 chr13 37139176 37139585 - unprocessed_pseudogene KNOWN OTTHUMG00000187801.1 410 410 1 ENSG00000279511.1 RP11-676B18.1 chr13 37142967 37146718 - TEC KNOWN OTTHUMG00000175981.1 3752 3752 1 ENSG00000202395.1 RN7SKP1 chr13 37166352 37166658 - misc_RNA KNOWN NA 307 307 1 ENSG00000143196.4 DPT chr1 168695459 168729264 - protein_coding KNOWN OTTHUMG00000034554.1 33806 1786 4 ENSG00000230283.1 RPS12P24 chr13 37220860 37221246 - processed_pseudogene KNOWN OTTHUMG00000016749.1 387 387 1 ENSG00000230390.1 LINC01048 chr13 37481467 37484769 - lincRNA NOVEL OTTHUMG00000016750.1 3303 511 4 ENSG00000275226.1 LINC00547 chr13 37534940 37551536 + lincRNA KNOWN OTTHUMG00000187339.1 16597 3314 5 ENSG00000133110.13 POSTN chr13 37562583 37598844 - protein_coding KNOWN OTTHUMG00000016751.2 36262 5464 141 ENSG00000133107.13 TRPC4 chr13 37636636 37870425 - protein_coding KNOWN OTTHUMG00000016752.4 233790 4205 95 ENSG00000199276.1 RNA5SP26 chr13 37854852 37854970 - rRNA KNOWN NA 119 119 1 ENSG00000274317.1 RP11-93G5.1 chr13 37934565 38048169 + lincRNA NOVEL OTTHUMG00000187340.1 113605 4959 5 ENSG00000228036.1 HSPD1P9 chr13 37993085 37994720 - processed_pseudogene KNOWN OTTHUMG00000016753.1 1636 1636 1 ENSG00000223685.4 LINC00571 chr13 38050817 38143232 - lincRNA NOVEL OTTHUMG00000016755.1 92416 1183 11 ENSG00000120686.10 UFM1 chr13 38349849 38363619 + protein_coding KNOWN OTTHUMG00000017409.3 13771 4382 22 ENSG00000221578.1 AL049798.1 chr1 168747796 168747882 - miRNA NOVEL NA 87 87 1 ENSG00000279025.1 RP11-131P10.2 chr13 38372856 38373935 + TEC KNOWN OTTHUMG00000175983.1 1080 1080 1 ENSG00000236354.1 LINC00437 chr13 38533343 38545299 - lincRNA NOVEL OTTHUMG00000016756.1 11957 791 2 ENSG00000229437.1 LINC00366 chr13 38576640 38578994 + lincRNA NOVEL OTTHUMG00000016758.1 2355 435 3 ENSG00000234701.1 PRDX3P3 chr13 38617419 38617940 - processed_pseudogene KNOWN OTTHUMG00000016757.1 522 522 1 ENSG00000150893.10 FREM2 chr13 38687129 38887131 + protein_coding KNOWN OTTHUMG00000016759.4 200003 16223 28 ENSG00000252795.1 RNU6-56P chr13 38779424 38779516 + snRNA KNOWN NA 93 93 1 ENSG00000212049.1 AL590007.1 chr13 38790644 38790754 + miRNA NOVEL NA 111 111 1 ENSG00000225350.1 FREM2-AS1 chr13 38821798 38827570 - antisense NOVEL OTTHUMG00000016760.1 5773 465 2 ENSG00000225221.1 PLA2G12AP2 chr13 38902387 38902650 + processed_pseudogene KNOWN OTTHUMG00000016761.1 264 264 1 ENSG00000235550.1 ANKRD26P2 chr13 38922727 38936199 - unprocessed_pseudogene KNOWN OTTHUMG00000016762.1 13473 1710 7 ENSG00000235736.1 RP1-10C16.1 chr1 168763365 168774490 - lincRNA NOVEL OTTHUMG00000034550.1 11126 418 2 ENSG00000133115.10 STOML3 chr13 38965925 38991066 - protein_coding KNOWN OTTHUMG00000016763.2 25142 2205 15 ENSG00000120685.18 PROSER1 chr13 39009866 39038076 - protein_coding KNOWN OTTHUMG00000016764.8 28211 7315 55 ENSG00000188811.11 NHLRC3 chr13 39038306 39050109 + protein_coding KNOWN OTTHUMG00000016765.5 11804 6409 31 ENSG00000273507.3 RP11-50D16.4 chr13 39053072 39221927 + lincRNA NOVEL OTTHUMG00000187359.1 168856 1099 6 ENSG00000214823.3 NXT1P1 chr13 39169636 39169951 - processed_pseudogene KNOWN OTTHUMG00000016766.1 316 316 1 ENSG00000183722.7 LHFP chr13 39342892 39603528 - protein_coding KNOWN OTTHUMG00000016767.1 260637 2327 7 ENSG00000216014.1 AL512505.1 chr13 39652578 39652669 + miRNA NOVEL NA 92 92 1 ENSG00000133103.15 COG6 chr13 39655627 39791665 + protein_coding KNOWN OTTHUMG00000016768.5 136039 8051 93 ENSG00000264171.1 MIR4305 chr13 39664034 39664135 - miRNA KNOWN NA 102 102 1 ENSG00000200526.1 RNY4P14 chr13 39785415 39785510 - misc_RNA KNOWN NA 96 96 1 ENSG00000225826.1 LINC00626 chr1 168786939 168792886 + lincRNA NOVEL OTTHUMG00000034551.2 5948 955 3 ENSG00000224351.2 CDKN2AIPNLP3 chr13 39817741 39818049 - processed_pseudogene KNOWN OTTHUMG00000016769.2 309 309 1 ENSG00000270444.1 AZU1P1 chr13 39856710 39857094 - processed_pseudogene KNOWN OTTHUMG00000184719.1 385 385 1 ENSG00000212553.1 SNORD116 chr13 39857135 39857227 - snoRNA NOVEL NA 93 93 1 ENSG00000275149.1 RP11-427J23.1 chr13 40079106 40273509 - lincRNA NOVEL OTTHUMG00000187361.1 194404 3541 4 ENSG00000230710.1 LINC00332 chr13 40181809 40189028 + lincRNA NOVEL OTTHUMG00000016770.1 7220 834 4 ENSG00000278772.1 LINC00548 chr13 40194509 40220502 - lincRNA KNOWN OTTHUMG00000187362.1 25994 2551 6 ENSG00000280465.1 AL356217.1 chr13 40200007 40200122 - miRNA NOVEL NA 116 116 1 ENSG00000271429.1 RPL17P51 chr13 40224625 40224862 - processed_pseudogene KNOWN OTTHUMG00000184721.1 238 238 1 ENSG00000207458.1 RNY3P9 chr13 40226827 40226932 + misc_RNA KNOWN NA 106 106 1 ENSG00000230058.1 RP11-172E9.2 chr13 40343957 40350303 - lincRNA NOVEL OTTHUMG00000016771.1 6347 444 2 ENSG00000235643.1 RP1-69M21.2 chr1 11609531 11613355 + lincRNA NOVEL OTTHUMG00000002076.1 3825 1285 3 ENSG00000229612.1 SUMO1P2 chr1 168898136 168898439 + processed_pseudogene KNOWN OTTHUMG00000034587.1 304 304 1 ENSG00000252812.1 RN7SKP2 chr13 40407122 40407440 - misc_RNA KNOWN NA 319 319 1 ENSG00000215483.7 LINC00598 chr13 40450934 40535807 - lincRNA NOVEL OTTHUMG00000016772.3 84874 2489 23 ENSG00000150907.6 FOXO1 chr13 40555667 40666597 - protein_coding KNOWN OTTHUMG00000016775.3 110931 5811 5 ENSG00000229456.1 RLIMP1 chr13 40618738 40621348 + processed_pseudogene KNOWN OTTHUMG00000016774.1 2611 1680 3 ENSG00000211491.2 MIR320D1 chr13 40727828 40727875 - miRNA KNOWN NA 48 48 1 ENSG00000102738.7 MRPS31 chr13 40729135 40771173 - protein_coding KNOWN OTTHUMG00000016777.3 42039 2124 15 ENSG00000277794.1 Metazoa_SRP chr13 40730981 40731253 + misc_RNA NOVEL NA 273 273 1 ENSG00000102743.13 SLC25A15 chr13 40789412 40810111 + protein_coding KNOWN OTTHUMG00000016776.5 20700 1837 21 ENSG00000207652.1 MIR621 chr13 40810766 40810861 + miRNA KNOWN NA 96 96 1 ENSG00000168852.11 TPTE2P5 chr13 40822296 40921749 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000016779.1 99454 1280 17 ENSG00000203601.3 LINC00970 chr1 168903905 169087005 - antisense NOVEL OTTHUMG00000034588.1 183101 1129 5 ENSG00000176268.5 CYCSP34 chr13 40863599 40863902 - processed_pseudogene KNOWN OTTHUMG00000016778.1 304 304 1 ENSG00000239827.7 SUGT1P3 chr13 40908159 40921774 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000016780.4 13616 1331 9 ENSG00000120690.12 ELF1 chr13 40931920 41061440 - protein_coding KNOWN OTTHUMG00000016783.5 129521 4401 34 ENSG00000229473.2 RGS17P1 chr13 40992779 40993331 - processed_pseudogene KNOWN OTTHUMG00000016782.2 553 553 1 ENSG00000120688.8 WBP4 chr13 41061274 41084006 + protein_coding KNOWN OTTHUMG00000016784.3 22733 2623 10 ENSG00000264226.1 MIR3168 chr13 41101019 41101100 - miRNA KNOWN NA 82 82 1 ENSG00000244264.3 RN7SL597P chr13 41121876 41122171 + misc_RNA KNOWN NA 296 296 1 ENSG00000165572.7 KBTBD6 chr13 41127569 41132746 - protein_coding KNOWN OTTHUMG00000016786.1 5178 5178 1 ENSG00000278390.3 RP11-74J13.8 chr13 41132939 41236686 + antisense NOVEL OTTHUMG00000187364.1 103748 2731 16 ENSG00000215482.3 CALM2P3 chr13 41170700 41171148 - processed_pseudogene KNOWN OTTHUMG00000016785.2 449 449 1 ENSG00000213063.3 RPL29P7 chr1 168938467 168938923 + processed_pseudogene KNOWN OTTHUMG00000034589.1 457 457 1 ENSG00000120696.8 KBTBD7 chr13 41189833 41194566 - protein_coding KNOWN OTTHUMG00000016789.1 4734 4734 1 ENSG00000225133.1 MORF4L1P4 chr13 41199832 41200807 - processed_pseudogene KNOWN OTTHUMG00000016787.1 976 976 1 ENSG00000120662.14 MTRF1 chr13 41216369 41263577 - protein_coding KNOWN OTTHUMG00000016790.5 47209 3841 58 ENSG00000277662.1 RP11-74J13.9 chr13 41229180 41229676 - sense_intronic NOVEL OTTHUMG00000187365.1 497 497 1 ENSG00000231404.2 RAC1P3 chr13 41287741 41288320 - processed_pseudogene KNOWN OTTHUMG00000016788.2 580 580 1 ENSG00000172766.17 NAA16 chr13 41311205 41377030 + protein_coding KNOWN OTTHUMG00000016791.6 65826 5867 90 ENSG00000223280.1 RNU6-57P chr13 41354557 41354659 - snRNA KNOWN NA 103 103 1 ENSG00000214222.2 TUBBP2 chr13 41384773 41385183 - processed_pseudogene KNOWN OTTHUMG00000016794.1 411 411 1 ENSG00000205240.4 OR7E36P chr13 41431248 41432201 - unprocessed_pseudogene KNOWN OTTHUMG00000016793.3 954 954 1 ENSG00000234655.3 OR7E155P chr13 41439834 41440847 - unprocessed_pseudogene KNOWN OTTHUMG00000016792.2 1014 1014 1 ENSG00000252987.1 RNA5SP66 chr1 169067264 169067364 + rRNA KNOWN NA 101 101 1 ENSG00000215480.4 OR7E37P chr13 41442770 41443666 + unprocessed_pseudogene KNOWN OTTHUMG00000016795.2 897 897 1 ENSG00000263907.1 AL354833.1 chr13 41445291 41445367 + miRNA NOVEL NA 77 77 1 ENSG00000263928.1 AL354833.2 chr13 41446057 41446125 - miRNA NOVEL NA 69 69 1 ENSG00000264042.1 AL354833.3 chr13 41450012 41450099 + miRNA NOVEL NA 88 88 1 ENSG00000102760.12 RGCC chr13 41457559 41470882 + protein_coding KNOWN OTTHUMG00000016796.1 13324 1032 8 ENSG00000102763.14 VWA8 chr13 41566837 41961120 - protein_coding KNOWN OTTHUMG00000016799.5 394284 7633 80 ENSG00000264190.1 MIR5006 chr13 41568286 41568395 - miRNA KNOWN NA 110 110 1 ENSG00000241406.3 RN7SL515P chr13 41807677 41807973 + misc_RNA KNOWN NA 297 297 1 ENSG00000280988.1 AL442203.1 chr13 41863393 41863477 - miRNA NOVEL NA 85 85 1 ENSG00000206962.1 RNU6-74P chr13 41905118 41905224 + snRNA KNOWN NA 107 107 1 ENSG00000237707.1 RP5-1018K9.1 chr1 169104124 169104907 + antisense NOVEL OTTHUMG00000034591.1 784 568 2 ENSG00000229696.1 KARSP1 chr13 41925598 41927349 + processed_pseudogene KNOWN OTTHUMG00000016797.1 1752 1752 1 ENSG00000278338.3 VWA8-AS1 chr13 41955808 41981565 + antisense KNOWN OTTHUMG00000187366.1 25758 2150 8 ENSG00000226093.1 RPS28P8 chr13 42003430 42003637 + processed_pseudogene KNOWN OTTHUMG00000016798.1 208 208 1 ENSG00000102780.15 DGKH chr13 42040036 42256578 + protein_coding KNOWN OTTHUMG00000016804.6 216543 19637 235 ENSG00000231530.1 RP11-187A9.3 chr13 42043727 42044247 - antisense NOVEL OTTHUMG00000016801.1 521 363 2 ENSG00000237263.1 MAPK6PS3 chr13 42068932 42071093 - processed_pseudogene KNOWN OTTHUMG00000016800.1 2162 2162 1 ENSG00000265679.1 AL139328.1 chr13 42172990 42173087 - miRNA NOVEL NA 98 98 1 ENSG00000270809.1 CHCHD2P11 chr13 42181465 42181921 - processed_pseudogene KNOWN OTTHUMG00000184722.1 457 457 1 ENSG00000234213.1 FHP1 chr13 42255873 42256575 + processed_pseudogene KNOWN OTTHUMG00000016802.1 703 703 1 ENSG00000023516.8 AKAP11 chr13 42272153 42323267 + protein_coding KNOWN OTTHUMG00000016805.3 51115 9920 13 ENSG00000143153.11 ATP1B1 chr1 169105697 169132722 + protein_coding KNOWN OTTHUMG00000034590.2 27026 2962 17 ENSG00000233259.4 FABP3P2 chr13 42369259 42369657 - processed_pseudogene KNOWN OTTHUMG00000016806.2 399 399 1 ENSG00000120659.13 TNFSF11 chr13 42562736 42608013 + protein_coding KNOWN OTTHUMG00000016807.4 45278 2733 30 ENSG00000179813.5 FAM216B chr13 42781550 42791549 + protein_coding KNOWN OTTHUMG00000016809.3 10000 3308 8 ENSG00000271216.1 LINC01050 chr13 42810366 42812562 - lincRNA NOVEL OTTHUMG00000184191.1 2197 760 3 ENSG00000229546.1 LINC00428 chr13 42842414 42842887 - lincRNA NOVEL OTTHUMG00000016811.1 474 227 2 ENSG00000133106.13 EPSTI1 chr13 42886388 42992271 - protein_coding KNOWN OTTHUMG00000016814.3 105884 4924 84 ENSG00000238025.1 ZDHHC4P1 chr13 42933858 42934892 + processed_pseudogene KNOWN OTTHUMG00000016812.1 1035 1035 1 ENSG00000120675.5 DNAJC15 chr13 43023203 43114224 + protein_coding KNOWN OTTHUMG00000016813.3 91022 8042 10 ENSG00000229928.1 LINC00400 chr13 43158631 43159466 + lincRNA NOVEL OTTHUMG00000016815.1 836 547 2 ENSG00000276569.1 RP11-460G11.2 chr13 43179501 43181193 - processed_pseudogene KNOWN OTTHUMG00000187803.1 1693 1693 1 ENSG00000143156.12 NME7 chr1 169132531 169367967 - protein_coding KNOWN OTTHUMG00000034586.4 235437 5737 101 ENSG00000120658.11 ENOX1 chr13 43213518 43786908 - protein_coding KNOWN OTTHUMG00000016818.2 573391 3139 35 ENSG00000273697.1 AL607148.1 chr13 43250061 43250120 - miRNA NOVEL NA 60 60 1 ENSG00000232540.1 RPL36P19 chr13 43394525 43394825 + processed_pseudogene KNOWN OTTHUMG00000016816.1 301 301 1 ENSG00000238189.2 ENOX1-AS2 chr13 43458465 43459484 + antisense NOVEL OTTHUMG00000016817.2 1020 609 2 ENSG00000233821.1 ENOX1-AS1 chr13 43543918 43548056 + lincRNA NOVEL OTTHUMG00000016819.1 4139 3907 2 ENSG00000270522.1 RP11-168P13.1 chr13 43787591 43787852 + lincRNA NOVEL OTTHUMG00000185241.1 262 262 1 ENSG00000151773.11 CCDC122 chr13 43823909 43879727 - protein_coding KNOWN OTTHUMG00000017413.8 55819 5403 21 ENSG00000274001.1 RP11-5G9.5 chr13 43877715 43878163 - sense_intronic NOVEL OTTHUMG00000187382.1 449 449 1 ENSG00000276108.1 AL512506.1 chr13 43878214 43878307 - miRNA NOVEL NA 94 94 1 ENSG00000179630.9 LACC1 chr13 43879284 43893932 + protein_coding KNOWN OTTHUMG00000016826.3 14649 4550 16 ENSG00000235575.1 RP4-800F24.1 chr1 169310665 169322479 + antisense NOVEL OTTHUMG00000035451.1 11815 368 2 ENSG00000281883.1 RP11-65B7.2 chr13 43883800 44028526 + protein_coding NOVEL OTTHUMG00000189707.1 144727 1792 13 ENSG00000280060.1 RP11-5G9.6 chr13 43894725 43895182 - TEC KNOWN OTTHUMG00000187400.1 458 458 1 ENSG00000233725.6 LINC00284 chr13 43908669 44030461 + lincRNA NOVEL OTTHUMG00000016827.8 121793 5160 41 ENSG00000179611.3 DGKZP1 chr13 43968424 43971199 + processed_pseudogene KNOWN OTTHUMG00000016825.2 2776 2776 1 ENSG00000226519.1 LINC00390 chr13 44106378 44137236 - lincRNA NOVEL OTTHUMG00000016828.1 30859 340 3 ENSG00000227258.4 SMIM2-AS1 chr13 44110451 44240517 + antisense KNOWN OTTHUMG00000016829.3 130067 3009 15 ENSG00000139656.6 SMIM2 chr13 44143543 44161257 - protein_coding KNOWN OTTHUMG00000016831.2 17715 824 4 ENSG00000235285.1 SMIM2-IT1 chr13 44146470 44158222 - sense_intronic NOVEL OTTHUMG00000016830.1 11753 478 3 ENSG00000276854.1 RP11-478K15.7 chr13 44196006 44197298 + lincRNA NOVEL OTTHUMG00000187401.1 1293 555 2 ENSG00000276319.1 MIR8079 chr13 44196129 44196200 - miRNA KNOWN NA 72 72 1 ENSG00000117475.12 BLZF1 chr1 169367970 169396540 + protein_coding KNOWN OTTHUMG00000035453.1 28571 3820 26 ENSG00000230731.2 RP11-478K15.6 chr13 44234118 44243192 - lincRNA NOVEL OTTHUMG00000184168.1 9075 3336 3 ENSG00000277831.1 RP11-269C23.5 chr13 44369365 44369877 - lincRNA NOVEL OTTHUMG00000187407.1 513 513 1 ENSG00000151778.9 SERP2 chr13 44373665 44397714 + protein_coding KNOWN OTTHUMG00000016833.4 24050 1927 14 ENSG00000237361.2 TUSC8 chr13 44400250 44405984 - lincRNA NOVEL OTTHUMG00000016834.2 5735 1334 4 ENSG00000102804.13 TSC22D1 chr13 44432143 44577147 - protein_coding KNOWN OTTHUMG00000016838.5 145005 8586 34 ENSG00000280357.1 RP11-269C23.4 chr13 44432144 44432678 + TEC KNOWN OTTHUMG00000175985.1 535 535 1 ENSG00000225727.2 RP11-71C5.2 chr13 44437207 44452827 + transcribed_processed_pseudogene KNOWN OTTHUMG00000016835.2 15621 399 4 ENSG00000276862.1 AL139184.1 chr13 44442078 44442127 - miRNA NOVEL NA 50 50 1 ENSG00000278156.1 TSC22D1-AS1 chr13 44575893 44580432 + antisense KNOWN OTTHUMG00000187411.1 4540 3457 4 ENSG00000230793.1 SMARCE1P5 chr13 44594858 44596082 + processed_pseudogene KNOWN OTTHUMG00000016836.3 1225 1225 1 ENSG00000117477.11 CCDC181 chr1 169394870 169460669 - protein_coding KNOWN OTTHUMG00000035448.3 65800 3961 35 ENSG00000237585.1 LINC00407 chr13 44651812 44701016 + lincRNA NOVEL OTTHUMG00000016839.1 49205 295 3 ENSG00000276527.1 RP11-442J21.2 chr13 44684487 44715393 - lincRNA NOVEL OTTHUMG00000187412.1 30907 415 2 ENSG00000235097.1 LINC00330 chr13 44799503 44809630 - lincRNA NOVEL OTTHUMG00000016840.1 10128 2036 3 ENSG00000083635.7 NUFIP1 chr13 44939249 44989483 - protein_coding KNOWN OTTHUMG00000016842.2 50235 3492 10 ENSG00000223732.2 RP11-321C24.1 chr13 44982077 45083125 - lincRNA NOVEL OTTHUMG00000016843.2 101049 315 3 ENSG00000133114.16 GPALPP1 chr13 44989529 45037669 + protein_coding KNOWN OTTHUMG00000016841.6 48141 10842 39 ENSG00000265802.2 RN7SL49P chr13 45002150 45002447 + misc_RNA KNOWN NA 298 298 1 ENSG00000223341.1 RN7SKP3 chr13 45060729 45061086 + misc_RNA KNOWN NA 358 358 1 ENSG00000188342.10 GTF2F2 chr13 45120515 45284909 + protein_coding KNOWN OTTHUMG00000016849.4 164395 3619 15 ENSG00000271818.1 7SK chr13 45123093 45123414 + misc_RNA NOVEL NA 322 322 1 ENSG00000116661.9 FBXO2 chr1 11648367 11655785 - protein_coding KNOWN OTTHUMG00000002072.3 7419 2333 17 ENSG00000117479.11 SLC19A2 chr1 169463909 169486003 - protein_coding KNOWN OTTHUMG00000035452.2 22095 3671 11 ENSG00000277358.1 RP11-321C24.4 chr13 45124015 45124143 - unprocessed_pseudogene KNOWN OTTHUMG00000187804.1 129 129 1 ENSG00000180332.6 KCTD4 chr13 45192853 45194717 - protein_coding KNOWN OTTHUMG00000016844.1 1865 1865 1 ENSG00000270381.1 RP11-290D2.5 chr13 45263690 45263915 + processed_pseudogene KNOWN OTTHUMG00000184727.1 226 226 1 ENSG00000221163.1 AL138963.1 chr13 45300014 45300100 - miRNA NOVEL NA 87 87 1 ENSG00000133112.15 TPT1 chr13 45333471 45341370 - protein_coding KNOWN OTTHUMG00000016845.6 7900 7269 61 ENSG00000253051.1 SNORA31 chr13 45336314 45336447 - snoRNA NOVEL NA 134 134 1 ENSG00000199477.1 SNORA31 chr13 45337480 45337609 - snoRNA KNOWN NA 130 130 1 ENSG00000273149.1 RP11-290D2.6 chr13 45340039 45341183 + antisense NOVEL OTTHUMG00000186000.1 1145 588 2 ENSG00000170919.14 TPT1-AS1 chr13 45341345 45393413 + antisense KNOWN OTTHUMG00000016851.5 52069 10402 106 ENSG00000228886.1 RP11-290D2.3 chr13 45350323 45351350 + lincRNA NOVEL OTTHUMG00000016846.1 1028 310 2 ENSG00000234604.2 RP1-206D15.5 chr1 169474060 169474159 - processed_pseudogene KNOWN OTTHUMG00000035450.2 100 100 1 ENSG00000214455.4 RCN1P2 chr13 45390353 45391267 - processed_pseudogene KNOWN OTTHUMG00000016852.1 915 915 1 ENSG00000174032.15 SLC25A30 chr13 45393316 45418455 - protein_coding KNOWN OTTHUMG00000016853.5 25140 6794 53 ENSG00000251015.1 SLC25A30-AS1 chr13 45418162 45420371 + lincRNA NOVEL OTTHUMG00000163473.1 2210 701 2 ENSG00000229303.1 PPIAP25 chr13 45436121 45436660 + processed_pseudogene KNOWN OTTHUMG00000016854.1 540 540 1 ENSG00000136152.13 COG3 chr13 45464898 45536630 + protein_coding KNOWN OTTHUMG00000016855.5 71733 6016 53 ENSG00000165837.10 ERICH6B chr13 45534522 45615739 - protein_coding KNOWN OTTHUMG00000016856.3 81218 2940 31 ENSG00000200709.1 RNA5SP27 chr13 45551485 45551603 - rRNA KNOWN NA 119 119 1 ENSG00000232786.1 TIMM9P3 chr13 45552863 45553136 - processed_pseudogene KNOWN OTTHUMG00000016857.1 274 274 1 ENSG00000228869.1 COX4I1P2 chr13 45671845 45672391 + processed_pseudogene KNOWN OTTHUMG00000016858.1 547 547 1 ENSG00000235366.2 LINC01055 chr13 45680184 45701184 - lincRNA NOVEL OTTHUMG00000016859.2 21001 1721 4 ENSG00000213062.4 RP1-206D15.6 chr1 169486076 169486986 + lincRNA NOVEL OTTHUMG00000186558.1 911 911 1 ENSG00000237876.1 AKR1B1P4 chr13 45687548 45688469 - processed_pseudogene KNOWN OTTHUMG00000016860.1 922 922 1 ENSG00000174015.8 SPERT chr13 45702311 45714559 + protein_coding KNOWN OTTHUMG00000016861.3 12249 2125 10 ENSG00000274357.1 Metazoa_SRP chr13 45732082 45732356 - misc_RNA NOVEL NA 275 275 1 ENSG00000280848.1 AL139320.1 chr13 45732089 45732172 - miRNA NOVEL NA 84 84 1 ENSG00000215475.4 SIAH3 chr13 45777243 45851736 - protein_coding KNOWN OTTHUMG00000016862.4 74494 7057 2 ENSG00000281729.1 AL445232.1 chr13 45915083 45915153 + miRNA NOVEL NA 71 71 1 ENSG00000123200.15 ZC3H13 chr13 45954465 46052759 - protein_coding KNOWN OTTHUMG00000016863.4 98295 10265 48 ENSG00000235903.6 CPB2-AS1 chr13 46052806 46113332 + antisense NOVEL OTTHUMG00000016865.3 60527 3954 14 ENSG00000080618.12 CPB2 chr13 46053186 46105076 - protein_coding KNOWN OTTHUMG00000016867.3 51891 1767 21 ENSG00000278937.1 RP11-139H14.5 chr13 46117864 46122699 + TEC KNOWN OTTHUMG00000175989.2 4836 4836 1 ENSG00000198734.9 F5 chr1 169514166 169586588 - protein_coding KNOWN OTTHUMG00000034595.3 72423 7158 52 ENSG00000136167.12 LCP1 chr13 46125920 46211871 - protein_coding KNOWN OTTHUMG00000016864.3 85952 5061 61 ENSG00000240767.3 RN7SL288P chr13 46169458 46169748 - misc_RNA KNOWN NA 291 291 1 ENSG00000173988.11 LRRC63 chr13 46211943 46277366 + protein_coding KNOWN OTTHUMG00000016866.3 65424 2677 28 ENSG00000252854.1 RN7SKP5 chr13 46249942 46250213 + misc_RNA KNOWN NA 272 272 1 ENSG00000251106.1 FAM206BP chr13 46270077 46270617 + processed_pseudogene KNOWN OTTHUMG00000016869.1 541 541 1 ENSG00000261097.1 LINC00563 chr13 46296445 46297844 - lincRNA NOVEL OTTHUMG00000175991.1 1400 1400 1 ENSG00000102445.17 KIAA0226L chr13 46342000 46438190 - protein_coding KNOWN OTTHUMG00000016868.8 96191 6105 141 ENSG00000223336.1 RNU2-6P chr13 46374401 46374590 - snRNA KNOWN NA 190 190 1 ENSG00000252385.1 RNU6-68P chr13 46410454 46410557 + snRNA KNOWN NA 104 104 1 ENSG00000241353.3 PPP1R2P4 chr13 46437394 46437988 - processed_pseudogene KNOWN OTTHUMG00000016876.1 595 595 1 ENSG00000174175.15 SELP chr1 169588849 169630193 - protein_coding KNOWN OTTHUMG00000034685.9 41345 3490 87 ENSG00000231817.6 LINC01198 chr13 46455135 46486506 - lincRNA NOVEL OTTHUMG00000016875.3 31372 2617 27 ENSG00000227019.2 OR7E101P chr13 46460609 46461121 + unprocessed_pseudogene KNOWN OTTHUMG00000016871.1 513 513 1 ENSG00000277228.1 RP11-189B4.7 chr13 46474246 46493268 + lincRNA NOVEL OTTHUMG00000187372.1 19023 315 3 ENSG00000205105.6 COX17P1 chr13 46490930 46491121 + processed_pseudogene KNOWN OTTHUMG00000016872.2 192 192 1 ENSG00000230243.1 FKBP1AP3 chr13 46505118 46505436 + processed_pseudogene KNOWN OTTHUMG00000016873.1 319 319 1 ENSG00000136141.13 LRCH1 chr13 46553168 46753040 + protein_coding KNOWN OTTHUMG00000016877.6 199873 7307 82 ENSG00000278462.1 RP11-165D6.1 chr13 46717423 46717688 + sense_intronic NOVEL OTTHUMG00000187375.1 266 266 1 ENSG00000139684.12 ESD chr13 46771256 46797232 - protein_coding KNOWN OTTHUMG00000016878.2 25977 3401 38 ENSG00000102468.9 HTR2A chr13 46831550 46897076 - protein_coding KNOWN OTTHUMG00000016881.4 65527 5624 11 ENSG00000224517.5 HTR2A-AS1 chr13 46852143 46856299 + antisense NOVEL OTTHUMG00000016880.2 4157 603 7 ENSG00000000460.15 C1orf112 chr1 169662007 169854080 + protein_coding KNOWN OTTHUMG00000035821.7 192074 5967 151 ENSG00000234590.1 GNG5P5 chr13 47307082 47307301 + processed_pseudogene KNOWN OTTHUMG00000016882.1 220 220 1 ENSG00000244521.3 RN7SL700P chr13 47458941 47459234 - misc_RNA KNOWN NA 294 294 1 ENSG00000234145.1 NAP1L4P3 chr13 47763460 47764606 + processed_pseudogene KNOWN OTTHUMG00000016883.1 1147 1147 1 ENSG00000229423.2 RPL27AP8 chr13 47766640 47767085 - processed_pseudogene KNOWN OTTHUMG00000016884.2 446 446 1 ENSG00000228573.1 RP11-279N8.1 chr13 47825330 47835956 - lincRNA NOVEL OTTHUMG00000016885.1 10627 411 3 ENSG00000234689.1 LINC00444 chr13 47905329 47907357 - lincRNA NOVEL OTTHUMG00000016886.1 2029 215 3 ENSG00000260388.2 LINC00562 chr13 47930153 47932622 - lincRNA NOVEL OTTHUMG00000175994.2 2470 2470 1 ENSG00000136143.12 SUCLA2 chr13 47936487 48001326 - protein_coding KNOWN OTTHUMG00000016889.3 64840 3238 46 ENSG00000227848.1 SUCLA2-AS1 chr13 48001389 48002552 + antisense NOVEL OTTHUMG00000016887.1 1164 552 2 ENSG00000136159.3 NUDT15 chr13 48037567 48047222 + protein_coding KNOWN OTTHUMG00000016890.3 9656 2098 3 ENSG00000188404.7 SELL chr1 169690667 169711698 - protein_coding KNOWN OTTHUMG00000034809.3 21032 2725 30 ENSG00000276968.1 RP11-90M2.5 chr13 48041751 48042184 - antisense NOVEL OTTHUMG00000187376.1 434 434 1 ENSG00000136146.13 MED4 chr13 48053323 48095131 - protein_coding KNOWN OTTHUMG00000016891.2 41809 2358 25 ENSG00000229111.1 MED4-AS1 chr13 48077137 48079991 + antisense NOVEL OTTHUMG00000016893.1 2855 542 3 ENSG00000224510.2 POLR2KP2 chr13 48134358 48134534 - processed_pseudogene KNOWN OTTHUMG00000016892.2 177 177 1 ENSG00000136156.11 ITM2B chr13 48233158 48270357 + protein_coding KNOWN OTTHUMG00000016894.4 37200 10210 17 ENSG00000231473.2 LINC00441 chr13 48296513 48303661 - lincRNA NOVEL OTTHUMG00000016896.2 7149 1143 5 ENSG00000139687.12 RB1 chr13 48303751 48481986 + protein_coding KNOWN OTTHUMG00000016900.4 178236 6169 47 ENSG00000238086.5 PPP1R26P1 chr13 48316863 48320475 - processed_pseudogene KNOWN OTTHUMG00000016899.1 3613 3613 1 ENSG00000177197.7 PCNPP5 chr13 48328084 48328564 - processed_pseudogene KNOWN OTTHUMG00000016898.1 481 481 1 ENSG00000277684.1 RP11-305D15.8 chr13 48340797 48341330 - antisense NOVEL OTTHUMG00000187377.1 534 534 1 ENSG00000007908.14 SELE chr1 169722641 169764705 - protein_coding KNOWN OTTHUMG00000034851.6 42065 4585 64 ENSG00000139679.14 LPAR6 chr13 48389567 48444704 - protein_coding KNOWN OTTHUMG00000016895.6 55138 4348 37 ENSG00000277233.1 Metazoa_SRP chr13 48429269 48429554 + misc_RNA NOVEL NA 286 286 1 ENSG00000136161.11 RCBTB2 chr13 48488959 48533256 - protein_coding KNOWN OTTHUMG00000016902.3 44298 3545 65 ENSG00000274929.1 RP11-165D7.5 chr13 48532013 48532599 - sense_intronic NOVEL OTTHUMG00000187378.1 587 587 1 ENSG00000233456.1 LINC01077 chr13 48570639 48573317 - lincRNA NOVEL OTTHUMG00000016904.1 2679 413 2 ENSG00000233610.1 LINC00462 chr13 48576974 48578088 - lincRNA NOVEL OTTHUMG00000016905.1 1115 962 2 ENSG00000152207.6 CYSLTR2 chr13 48653711 48711226 + protein_coding KNOWN OTTHUMG00000016906.3 57516 5372 20 ENSG00000222391.1 AL137118.1 chr13 48752089 48752156 - miRNA NOVEL NA 68 68 1 ENSG00000225131.2 PSME2P2 chr13 48771128 48771827 + processed_pseudogene KNOWN OTTHUMG00000016907.1 700 700 1 ENSG00000275202.1 RP11-156K23.3 chr13 48974967 48976867 - antisense NOVEL OTTHUMG00000187380.1 1901 1101 2 ENSG00000230704.1 RP1-117P20.3 chr1 169762929 169764648 - lincRNA NOVEL OTTHUMG00000035812.1 1720 677 2 ENSG00000102531.15 FNDC3A chr13 48975912 49209779 + protein_coding KNOWN OTTHUMG00000016911.7 233868 7698 115 ENSG00000201662.1 RNU6-60P chr13 48987915 48988017 + snRNA KNOWN NA 103 103 1 ENSG00000223724.1 RAD17P2 chr13 49044079 49046794 - processed_pseudogene KNOWN OTTHUMG00000016908.1 2716 1977 3 ENSG00000199788.1 RNY3P2 chr13 49095391 49095492 + misc_RNA KNOWN NA 102 102 1 ENSG00000235957.1 COX7CP1 chr13 49187479 49187670 - processed_pseudogene KNOWN OTTHUMG00000016912.1 192 192 1 ENSG00000231665.1 OGFOD1P1 chr13 49210422 49212294 - processed_pseudogene KNOWN OTTHUMG00000016910.1 1873 1592 2 ENSG00000102539.5 MLNR chr13 49220338 49222377 + protein_coding KNOWN OTTHUMG00000016909.1 2040 1239 2 ENSG00000274351.1 RP11-203I16.7 chr13 49232874 49234399 + unprocessed_pseudogene KNOWN OTTHUMG00000187805.1 1526 1244 2 ENSG00000102543.13 CDADC1 chr13 49247925 49293485 + protein_coding KNOWN OTTHUMG00000016913.5 45561 3863 34 ENSG00000102547.17 CAB39L chr13 49308650 49444126 - protein_coding KNOWN OTTHUMG00000016914.4 135477 5006 89 ENSG00000171806.10 METTL18 chr1 169792529 169794966 - protein_coding KNOWN OTTHUMG00000035813.1 2438 1578 6 ENSG00000136169.15 SETDB2 chr13 49444374 49495003 + protein_coding KNOWN OTTHUMG00000016918.4 50630 6678 56 ENSG00000236577.1 SNRPGP14 chr13 49488970 49489364 + processed_pseudogene KNOWN OTTHUMG00000016917.1 395 219 2 ENSG00000136147.15 PHF11 chr13 49495610 49528987 + protein_coding KNOWN OTTHUMG00000016916.4 33378 4841 126 ENSG00000136144.10 RCBTB1 chr13 49531946 49585583 - protein_coding KNOWN OTTHUMG00000016915.4 53638 4534 29 ENSG00000176882.5 RP11-432M24.4 chr13 49620314 49620646 + processed_pseudogene KNOWN OTTHUMG00000016921.1 333 333 1 ENSG00000152213.3 ARL11 chr13 49628299 49633872 + protein_coding KNOWN OTTHUMG00000016919.2 5574 3826 5 ENSG00000123179.12 EBPL chr13 49660723 49691475 - protein_coding KNOWN OTTHUMG00000016920.4 30753 1500 25 ENSG00000102753.8 KPNA3 chr13 49699307 49792921 - protein_coding KNOWN OTTHUMG00000016922.3 93615 4474 21 ENSG00000276436.1 RP11-195L15.2 chr13 49792886 49793307 + antisense NOVEL OTTHUMG00000187350.1 422 422 1 ENSG00000222148.1 RNY4P30 chr13 49889634 49889728 - misc_RNA KNOWN NA 95 95 1 ENSG00000132879.12 FBXO44 chr1 11654375 11663327 + protein_coding KNOWN OTTHUMG00000002071.5 8953 3527 51 ENSG00000000457.12 SCYL3 chr1 169849631 169894267 - protein_coding KNOWN OTTHUMG00000035941.4 44637 6883 63 ENSG00000181358.3 CTAGE10P chr13 49890591 49892998 + processed_pseudogene KNOWN OTTHUMG00000016925.1 2408 2408 1 ENSG00000200064.1 RNY4P9 chr13 49908634 49908730 - misc_RNA KNOWN NA 97 97 1 ENSG00000123178.13 SPRYD7 chr13 49912706 49936490 - protein_coding KNOWN OTTHUMG00000016924.4 23785 3340 16 ENSG00000264526.1 AL136123.1 chr13 49952534 49952614 - miRNA NOVEL NA 81 81 1 ENSG00000231607.7 DLEU2 chr13 49982552 50125720 - antisense KNOWN OTTHUMG00000016927.5 143169 5103 50 ENSG00000204977.8 TRIM13 chr13 49995888 50020481 + protein_coding KNOWN OTTHUMG00000016926.4 24594 8080 25 ENSG00000264864.1 MIR3613 chr13 49996415 49996501 - miRNA KNOWN NA 87 87 1 ENSG00000198553.7 KCNRG chr13 50015254 50020922 + protein_coding KNOWN OTTHUMG00000140140.1 5669 1625 5 ENSG00000277913.1 DLEU2_1 chr13 50044649 50044768 + misc_RNA NOVEL NA 120 120 1 ENSG00000277066.1 DLEU2_2 chr13 50045143 50045232 + misc_RNA NOVEL NA 90 90 1 ENSG00000239494.2 RN7SL333P chr1 169859756 169860052 + misc_RNA KNOWN NA 297 297 1 ENSG00000208006.1 MIR16-1 chr13 50048973 50049061 - miRNA KNOWN NA 89 89 1 ENSG00000275952.2 MIR15A chr13 50049108 50049202 - miRNA KNOWN NA 95 95 1 ENSG00000274878.1 DLEU2_3 chr13 50049591 50049663 + misc_RNA NOVEL NA 73 73 1 ENSG00000273612.1 DLEU2_4 chr13 50068107 50068164 + misc_RNA NOVEL NA 58 58 1 ENSG00000277752.1 DLEU2_5 chr13 50075570 50075653 + misc_RNA NOVEL NA 84 84 1 ENSG00000275559.1 DLEU2_6 chr13 50081843 50081978 + misc_RNA NOVEL NA 136 136 1 ENSG00000176124.10 DLEU1 chr13 50082171 50723236 + protein_coding KNOWN OTTHUMG00000016934.4 641066 11847 156 ENSG00000276089.1 DLEU1_1 chr13 50082295 50082484 + misc_RNA NOVEL NA 190 190 1 ENSG00000214359.3 RPL18P10 chr13 50099331 50099868 + processed_pseudogene KNOWN OTTHUMG00000016928.1 538 538 1 ENSG00000273541.1 DLEU1_2 chr13 50104833 50105174 + misc_RNA NOVEL NA 342 342 1 ENSG00000075945.11 KIFAP3 chr1 169921326 170085208 - protein_coding KNOWN OTTHUMG00000035947.2 163883 4978 88 ENSG00000274270.1 RP11-34F20.7 chr13 50125816 50128463 + sense_intronic NOVEL OTTHUMG00000187356.1 2648 2648 1 ENSG00000232150.3 ST13P4 chr13 50172089 50173181 + processed_pseudogene KNOWN OTTHUMG00000016930.1 1093 1093 1 ENSG00000223676.1 RPL34P26 chr13 50361410 50361763 - processed_pseudogene KNOWN OTTHUMG00000016931.1 354 354 1 ENSG00000221198.2 AL138696.1 chr13 50363148 50363237 - miRNA NOVEL NA 90 90 1 ENSG00000229323.1 DLEU1-AS1 chr13 50520933 50527449 - lincRNA NOVEL OTTHUMG00000016932.2 6517 731 3 ENSG00000281190.1 AC007304.1 chr13 50643015 50643140 + miRNA NOVEL NA 126 126 1 ENSG00000186047.9 DLEU7 chr13 50711008 50843939 - protein_coding KNOWN OTTHUMG00000016936.2 132932 3656 6 ENSG00000237152.3 DLEU7-AS1 chr13 50807856 50849905 + antisense NOVEL OTTHUMG00000016935.3 42050 1806 5 ENSG00000200711.1 RNA5SP28 chr13 50812988 50813106 - rRNA KNOWN NA 119 119 1 ENSG00000233672.5 RNASEH2B-AS1 chr13 50862172 50910764 - antisense NOVEL OTTHUMG00000016938.5 48593 4642 35 ENSG00000243051.3 RN7SL269P chr1 169957942 169958246 - misc_RNA KNOWN NA 305 305 1 ENSG00000136104.17 RNASEH2B chr13 50909678 50973745 + protein_coding KNOWN OTTHUMG00000016937.8 64068 8519 62 ENSG00000123201.13 GUCY1B2 chr13 50994511 51080862 - unitary_pseudogene KNOWN OTTHUMG00000016940.5 86352 4060 60 ENSG00000222920.1 RNA5SP29 chr13 51027747 51027852 - rRNA KNOWN NA 106 106 1 ENSG00000226792.5 LINC00371 chr13 51082119 51172388 - lincRNA NOVEL OTTHUMG00000153575.3 90270 3144 13 ENSG00000214878.2 RPL5P31 chr13 51161723 51162357 - processed_pseudogene KNOWN OTTHUMG00000016941.1 635 635 1 ENSG00000274652.1 RP11-457D13.4 chr13 51180178 51180967 + lincRNA NOVEL OTTHUMG00000187363.1 790 790 1 ENSG00000271242.1 SLMO2P2 chr13 51195881 51196081 + processed_pseudogene KNOWN OTTHUMG00000184860.1 201 201 1 ENSG00000150510.14 FAM124A chr13 51222334 51284241 + protein_coding KNOWN OTTHUMG00000016942.5 61908 6702 19 ENSG00000253309.5 SERPINE3 chr13 51335773 51364735 + protein_coding KNOWN OTTHUMG00000016943.3 28963 2608 29 ENSG00000266072.1 MIR5693 chr13 51348567 51348639 - miRNA KNOWN NA 73 73 1 ENSG00000235378.2 MRPS10P1 chr1 169990067 169990196 + processed_pseudogene KNOWN OTTHUMG00000035958.2 130 130 1 ENSG00000102786.13 INTS6 chr13 51354077 51454264 - protein_coding KNOWN OTTHUMG00000016945.5 100188 25509 152 ENSG00000236778.6 INTS6-AS1 chr13 51452367 51552364 + antisense NOVEL OTTHUMG00000016944.7 99998 9866 114 ENSG00000224892.5 RPS4XP16 chr13 51454164 51461315 + transcribed_processed_pseudogene KNOWN OTTHUMG00000016946.3 7152 997 5 ENSG00000274190.1 AL354820.1 chr13 51456200 51456284 - miRNA NOVEL NA 85 85 1 ENSG00000243900.3 RN7SL320P chr13 51469753 51470047 + misc_RNA KNOWN NA 295 295 1 ENSG00000229906.1 SNRPGP11 chr13 51496020 51496251 - processed_pseudogene KNOWN OTTHUMG00000016947.1 232 232 1 ENSG00000266611.1 MIR4703 chr13 51552589 51552667 + miRNA KNOWN NA 79 79 1 ENSG00000252141.1 RNU6-65P chr13 51565412 51565509 + snRNA KNOWN NA 98 98 1 ENSG00000139668.8 WDFY2 chr13 51584455 51767707 + protein_coding KNOWN OTTHUMG00000017407.5 183253 16197 17 ENSG00000206920.1 RNY1P6 chr13 51586424 51586532 - misc_RNA KNOWN NA 109 109 1 ENSG00000232959.1 RP11-332H17.1 chr1 170024077 170024683 + antisense NOVEL OTTHUMG00000035956.1 607 341 2 ENSG00000242893.3 RN7SL413P chr13 51593919 51594215 - misc_RNA KNOWN NA 297 297 1 ENSG00000224451.2 ATP5F1P1 chr13 51598416 51599460 + processed_pseudogene KNOWN OTTHUMG00000016948.2 1045 569 2 ENSG00000102796.9 DHRS12 chr13 51767993 51804157 - protein_coding KNOWN OTTHUMG00000016952.4 36165 3525 55 ENSG00000231856.2 RP11-327P2.5 chr13 51803838 51813832 + antisense NOVEL OTTHUMG00000016953.3 9995 2469 3 ENSG00000281106.1 LINC00282 chr13 51813347 51845175 - lincRNA KNOWN OTTHUMG00000189519.1 31829 4151 12 ENSG00000123171.6 CCDC70 chr13 51861981 51866232 + protein_coding KNOWN OTTHUMG00000016950.3 4252 1150 2 ENSG00000232872.2 CTAGE3P chr13 51908218 51910621 - processed_pseudogene KNOWN OTTHUMG00000016951.1 2404 2404 1 ENSG00000279677.1 RP11-327P2.6 chr13 51921251 51921587 + TEC KNOWN OTTHUMG00000175998.1 337 337 1 ENSG00000123191.12 ATP7B chr13 51932673 52011494 - protein_coding KNOWN OTTHUMG00000017406.1 78822 6831 130 ENSG00000236044.1 FABP5P2 chr13 51966742 51967149 + processed_pseudogene KNOWN OTTHUMG00000016954.1 408 408 1 ENSG00000224896.2 SIGLEC30P chr1 170115636 170116576 + processed_pseudogene KNOWN OTTHUMG00000035957.2 941 941 1 ENSG00000253710.2 ALG11 chr13 52012398 52029664 + protein_coding KNOWN OTTHUMG00000016959.3 17267 7716 11 ENSG00000253797.2 UTP14C chr13 52024691 52033600 + protein_coding KNOWN OTTHUMG00000164353.2 8910 5529 2 ENSG00000197168.10 NEK5 chr13 52033611 52129078 - protein_coding KNOWN OTTHUMG00000016957.6 95468 6958 63 ENSG00000273523.1 RP11-248G5.9 chr13 52128891 52132723 + antisense NOVEL OTTHUMG00000187319.1 3833 3433 2 ENSG00000136098.15 NEK3 chr13 52132639 52159861 - protein_coding KNOWN OTTHUMG00000016958.8 27223 4272 106 ENSG00000217576.7 RP11-248G5.8 chr13 52167709 52291557 - processed_transcript NOVEL OTTHUMG00000185730.1 123849 3796 22 ENSG00000243406.5 MRPS31P5 chr13 52167709 52194465 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000016960.1 26757 3873 27 ENSG00000272281.5 TPTE2P2 chr13 52219344 52334277 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000016961.1 114934 6223 68 ENSG00000271564.1 RP13-444H2.1 chr13 52334295 52341896 + lincRNA NOVEL OTTHUMG00000184174.1 7602 852 3 ENSG00000136114.14 THSD1 chr13 52377167 52406494 - protein_coding KNOWN OTTHUMG00000016963.4 29328 3348 9 ENSG00000203740.3 METTL11B chr1 170146001 170167790 + protein_coding KNOWN OTTHUMG00000035959.2 21790 1204 9 ENSG00000199605.1 RNY4P24 chr13 52400004 52400099 + misc_RNA KNOWN NA 96 96 1 ENSG00000136100.11 VPS36 chr13 52412602 52450628 - protein_coding KNOWN OTTHUMG00000016964.3 38027 5614 45 ENSG00000278238.1 RP11-245D16.4 chr13 52454775 52455331 - lincRNA NOVEL OTTHUMG00000187321.1 557 557 1 ENSG00000136108.13 CKAP2 chr13 52455429 52476628 + protein_coding KNOWN OTTHUMG00000016967.6 21200 4547 42 ENSG00000235660.1 LINC00345 chr13 52484161 52484680 - lincRNA NOVEL OTTHUMG00000016974.1 520 285 2 ENSG00000244471.4 RP11-78J21.4 chr13 52488993 52499305 + lincRNA NOVEL OTTHUMG00000016975.1 10313 834 7 ENSG00000280296.1 RP11-78J21.6 chr13 52497097 52500195 - TEC KNOWN OTTHUMG00000187322.1 3099 3099 1 ENSG00000198384.8 TPTE2P3 chr13 52522632 52586906 + unprocessed_pseudogene KNOWN OTTHUMG00000016976.1 64275 1189 14 ENSG00000273784.3 RP11-78J21.7 chr13 52600042 52642542 + processed_transcript NOVEL OTTHUMG00000016973.2 42501 985 15 ENSG00000250299.4 MRPS31P4 chr13 52600119 52637446 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000187323.1 37328 1000 10 ENSG00000263390.1 MIR3119-2 chr1 170151378 170151462 + miRNA KNOWN NA 85 85 1 ENSG00000139675.11 HNRNPA1L2 chr13 52640786 52643796 + protein_coding KNOWN OTTHUMG00000016972.3 3011 3011 1 ENSG00000273723.1 RP11-93H24.3 chr13 52651305 52652279 - lincRNA NOVEL OTTHUMG00000187324.1 975 975 1 ENSG00000165416.13 SUGT1 chr13 52652709 52700909 + protein_coding KNOWN OTTHUMG00000016977.3 48201 15102 38 ENSG00000136110.11 LECT1 chr13 52703264 52739812 - protein_coding KNOWN OTTHUMG00000016980.4 36549 1628 18 ENSG00000211579.1 MIR759 chr13 52810044 52810139 + miRNA KNOWN NA 96 96 1 ENSG00000150276.8 PPIAP26 chr13 52820497 52821018 + processed_pseudogene KNOWN OTTHUMG00000016978.2 522 522 1 ENSG00000136099.12 PCDH8 chr13 52842889 52848641 - protein_coding KNOWN OTTHUMG00000016979.4 5753 5150 8 ENSG00000102837.6 OLFM4 chr13 53028759 53052057 + protein_coding KNOWN OTTHUMG00000016981.3 23299 2897 5 ENSG00000237092.1 LINC01065 chr13 53146539 53151808 - lincRNA NOVEL OTTHUMG00000016983.1 5270 577 3 ENSG00000279325.1 RP11-24H2.3 chr13 53193667 53198540 + lincRNA NOVEL OTTHUMG00000189146.1 4874 565 2 ENSG00000233985.1 RP11-297H3.3 chr1 170174403 170241287 + lincRNA NOVEL OTTHUMG00000035971.1 66885 760 4 ENSG00000225510.2 PCDH8P1 chr13 53199981 53202753 + transcribed_processed_pseudogene KNOWN OTTHUMG00000016982.2 2773 2773 2 ENSG00000241613.3 RN7SL618P chr13 53258077 53258372 + misc_RNA KNOWN NA 296 296 1 ENSG00000273919.1 RP11-384G23.1 chr13 53345211 53410880 + lincRNA NOVEL OTTHUMG00000187332.1 65670 1857 3 ENSG00000220990.1 AL450423.1 chr13 53367845 53367956 - miRNA NOVEL NA 112 112 1 ENSG00000274316.1 RP11-384G23.2 chr13 53408882 53409876 - unprocessed_pseudogene KNOWN OTTHUMG00000187806.1 995 995 1 ENSG00000261517.1 LINC00558 chr13 53815419 53876119 + lincRNA NOVEL OTTHUMG00000176029.1 60701 3163 6 ENSG00000234787.6 LINC00458 chr13 54115783 54132866 - lincRNA NOVEL OTTHUMG00000016984.4 17084 2444 21 ENSG00000271652.1 RP11-168P6.2 chr13 54116476 54116851 + processed_pseudogene KNOWN OTTHUMG00000184863.1 376 376 1 ENSG00000136149.6 RPL13AP25 chr13 54440704 54441315 - processed_pseudogene KNOWN OTTHUMG00000016985.2 612 612 1 ENSG00000266699.1 AL512655.1 chr13 54805867 54805957 - miRNA NOVEL NA 91 91 1 ENSG00000116663.9 FBXO6 chr1 11664124 11674354 + protein_coding KNOWN OTTHUMG00000002229.1 10231 1811 14 ENSG00000238051.1 ISCUP1 chr1 170211010 170211457 - processed_pseudogene KNOWN OTTHUMG00000035970.1 448 448 1 ENSG00000277047.3 RP11-108H9.1 chr13 54940843 54986719 + lincRNA NOVEL OTTHUMG00000187312.1 45877 918 11 ENSG00000278630.1 RP11-78L16.1 chr13 55062945 55161490 + lincRNA NOVEL OTTHUMG00000187313.1 98546 659 3 ENSG00000275071.1 uc_338 chr13 55128285 55128444 + misc_RNA NOVEL NA 160 160 1 ENSG00000264387.1 MIR5007 chr13 55174454 55174548 + miRNA KNOWN NA 95 95 1 ENSG00000274090.1 RP11-415G4.1 chr13 55535697 55583524 - lincRNA NOVEL OTTHUMG00000187316.1 47828 809 3 ENSG00000228611.2 HNF4GP1 chr13 55999200 56000448 - processed_pseudogene KNOWN OTTHUMG00000016986.2 1249 1249 1 ENSG00000228319.1 SPATA2P1 chr13 56214373 56216942 + processed_pseudogene KNOWN OTTHUMG00000016987.1 2570 2055 2 ENSG00000201665.1 RN7SKP6 chr13 56885284 56885602 - misc_RNA KNOWN NA 319 319 1 ENSG00000229665.7 PRR20C chr13 57140918 57157082 + protein_coding KNOWN OTTHUMG00000184244.1 16165 2061 6 ENSG00000204919.1 PRR20A chr13 57140918 57143939 + protein_coding KNOWN OTTHUMG00000160602.1 3022 1847 3 ENSG00000224286.4 LINC01142 chr1 170271603 170284208 - lincRNA NOVEL OTTHUMG00000035969.1 12606 1527 6 ENSG00000204918.3 PRR20B chr13 57147488 57150509 + protein_coding KNOWN OTTHUMG00000184243.1 3022 1847 3 ENSG00000227151.4 PRR20D chr13 57160632 57163653 + protein_coding KNOWN OTTHUMG00000184245.1 3022 1847 3 ENSG00000234278.3 PRR20E chr13 57167197 57170218 + protein_coding KNOWN OTTHUMG00000184246.1 3022 1847 3 ENSG00000271140.1 PRR20FP chr13 57173453 57173632 + unprocessed_pseudogene KNOWN OTTHUMG00000184247.1 180 180 1 ENSG00000230009.1 MTCO2P3 chr13 57204379 57204799 + processed_pseudogene KNOWN OTTHUMG00000016988.1 421 421 1 ENSG00000234421.2 SLC25A5P4 chr13 57314739 57315909 + processed_pseudogene KNOWN OTTHUMG00000016989.1 1171 869 2 ENSG00000225352.1 RPL31P53 chr13 57391171 57391518 - processed_pseudogene KNOWN OTTHUMG00000157160.1 348 348 1 ENSG00000118946.10 PCDH17 chr13 57631810 57729311 + protein_coding KNOWN OTTHUMG00000016992.5 97502 8326 17 ENSG00000278722.1 RP11-95F22.1 chr13 57632759 57633575 - antisense NOVEL OTTHUMG00000188188.1 817 654 2 ENSG00000202422.1 RNA5SP30 chr13 57991350 57991464 + rRNA KNOWN NA 115 115 1 ENSG00000226967.1 HAUS4P1 chr1 170369223 170370367 - processed_pseudogene KNOWN OTTHUMG00000034663.1 1145 1145 1 ENSG00000277448.1 RP11-538C21.2 chr13 58165827 58209483 + lincRNA NOVEL OTTHUMG00000187310.1 43657 2753 3 ENSG00000232954.2 LINC00374 chr13 58211697 58233117 - lincRNA NOVEL OTTHUMG00000016997.2 21421 800 7 ENSG00000276208.1 RP11-168J5.2 chr13 58377513 58377774 + unprocessed_pseudogene KNOWN OTTHUMG00000187808.1 262 262 1 ENSG00000222733.1 RNY4P29 chr13 58527655 58527751 - misc_RNA KNOWN NA 97 97 1 ENSG00000214335.3 CTAGE16P chr13 58528615 58531026 + processed_pseudogene KNOWN OTTHUMG00000016998.1 2412 2412 1 ENSG00000223717.1 DNAJA1P1 chr13 58751047 58752233 - processed_pseudogene KNOWN OTTHUMG00000016999.1 1187 1187 1 ENSG00000278150.1 AL359262.1 chr13 58937273 58937372 + miRNA NOVEL NA 100 100 1 ENSG00000214281.3 HMGN2P39 chr13 59010332 59010604 + processed_pseudogene KNOWN OTTHUMG00000017000.2 273 273 1 ENSG00000232647.1 POLR3KP1 chr13 59071462 59071803 - processed_pseudogene KNOWN OTTHUMG00000017001.1 342 342 1 ENSG00000271190.1 RPP40P2 chr13 59262680 59263391 + processed_pseudogene KNOWN OTTHUMG00000184864.1 712 712 1 ENSG00000263384.1 AL354732.1 chr1 170370213 170370295 - miRNA NOVEL NA 83 83 1 ENSG00000239003.1 RNU7-88P chr13 59480070 59480132 + snRNA KNOWN NA 63 63 1 ENSG00000139734.16 DIAPH3 chr13 59665583 60163987 - protein_coding KNOWN OTTHUMG00000017004.4 498405 7259 176 ENSG00000227528.4 DIAPH3-AS1 chr13 60012751 60044357 + antisense NOVEL OTTHUMG00000017002.1 31607 536 11 ENSG00000265745.2 RN7SL375P chr13 60034465 60034762 - misc_RNA KNOWN NA 298 298 1 ENSG00000223815.1 DIAPH3-AS2 chr13 60144698 60153505 + antisense NOVEL OTTHUMG00000017003.1 8808 367 3 ENSG00000202151.1 RNY4P28 chr13 60187738 60187830 - misc_RNA KNOWN NA 93 93 1 ENSG00000227336.1 LINC00434 chr13 60214352 60214946 - lincRNA NOVEL OTTHUMG00000017005.1 595 419 2 ENSG00000238213.1 TARDBPP2 chr13 60274776 60276006 + processed_pseudogene KNOWN OTTHUMG00000017006.1 1231 1231 1 ENSG00000277549.1 RP11-359P14.3 chr13 60322591 60322766 + unprocessed_pseudogene KNOWN OTTHUMG00000187809.1 176 176 1 ENSG00000083544.12 TDRD3 chr13 60396457 60573878 + protein_coding KNOWN OTTHUMG00000017007.6 177422 6814 92 ENSG00000231407.4 RP11-576I22.2 chr1 170460453 170532647 - antisense NOVEL OTTHUMG00000035227.1 72195 3185 11 ENSG00000212054.2 AL354764.1 chr13 60452704 60452785 - miRNA NOVEL NA 82 82 1 ENSG00000223076.1 RNA5SP31 chr13 60613608 60613734 + rRNA KNOWN NA 127 127 1 ENSG00000236608.1 EIF4A1P6 chr13 60636888 60638097 - processed_pseudogene KNOWN OTTHUMG00000017009.1 1210 1210 1 ENSG00000225249.4 LINC00378 chr13 60685199 60694528 + lincRNA NOVEL OTTHUMG00000017008.1 9330 481 6 ENSG00000279657.1 RP11-521H3.3 chr13 60730176 60733600 + TEC KNOWN OTTHUMG00000176033.1 3425 3425 1 ENSG00000206854.1 RNY3P5 chr13 60789560 60789661 + misc_RNA KNOWN NA 102 102 1 ENSG00000281390.1 Y_RNA chr13 60816701 60816786 - misc_RNA NOVEL NA 86 86 1 ENSG00000227510.3 LINC01442 chr13 60917001 60941768 + lincRNA NOVEL OTTHUMG00000017010.3 24768 2107 4 ENSG00000266663.1 MIR3169 chr13 61199798 61199880 - miRNA KNOWN NA 83 83 1 ENSG00000280165.1 PCDH20 chr13 61409685 61415522 - protein_coding KNOWN OTTHUMG00000017012.5 5838 4778 2 ENSG00000120370.11 GORAB chr1 170532129 170553446 + protein_coding KNOWN OTTHUMG00000035228.2 21318 3773 24 ENSG00000197991.11 PCDH20 chr13 61409858 61427849 - protein_coding NOVEL OTTHUMG00000189120.1 17992 6347 5 ENSG00000279797.1 RP11-432J3.4 chr13 61424689 61427946 - lincRNA NOVEL OTTHUMG00000189119.2 3258 752 2 ENSG00000212007.3 AL596329.1 chr13 61760284 61760376 + miRNA NOVEL NA 93 93 1 ENSG00000234033.1 RAC1P8 chr13 61805150 61805676 + processed_pseudogene KNOWN OTTHUMG00000017013.1 527 527 1 ENSG00000281714.1 AL353765.2 chr13 61890981 61891122 - miRNA NOVEL NA 142 142 1 ENSG00000270856.1 RP11-429G17.2 chr13 61927090 61927272 - processed_pseudogene KNOWN OTTHUMG00000184729.1 183 183 1 ENSG00000274645.1 AL353765.1 chr13 61952980 61953070 - miRNA NOVEL NA 91 91 1 ENSG00000229578.2 LINC00358 chr13 62003525 62029548 - lincRNA NOVEL OTTHUMG00000017014.2 26024 1276 2 ENSG00000230142.2 LINC01075 chr13 62212577 62249947 + lincRNA NOVEL OTTHUMG00000017017.2 37371 370 4 ENSG00000227611.1 LINC01074 chr13 62321305 62322398 + lincRNA NOVEL OTTHUMG00000017016.1 1094 555 2 ENSG00000225545.1 RP11-545I10.2 chr1 170587249 170588236 - lincRNA NOVEL OTTHUMG00000035229.1 988 130 2 ENSG00000229307.1 LINC00459 chr13 62323657 62328833 + lincRNA NOVEL OTTHUMG00000017015.1 5177 376 2 ENSG00000232105.1 RPL32P28 chr13 62327988 62328384 + processed_pseudogene KNOWN OTTHUMG00000017018.1 397 397 1 ENSG00000276586.1 RP11-490P13.2 chr13 62397645 62397916 + unprocessed_pseudogene KNOWN OTTHUMG00000187810.1 272 272 1 ENSG00000271465.1 SQSTM1P1 chr13 62406058 62406916 - processed_pseudogene KNOWN OTTHUMG00000184733.1 859 859 1 ENSG00000228669.1 LINC00448 chr13 62672285 62732359 - lincRNA NOVEL OTTHUMG00000017019.1 60075 748 6 ENSG00000276056.1 AL442643.1 chr13 62919471 62919556 - miRNA NOVEL NA 86 86 1 ENSG00000273550.1 RP11-527N12.2 chr13 63034992 63097797 + lincRNA NOVEL OTTHUMG00000187307.1 62806 635 3 ENSG00000227564.2 LINC00376 chr13 63183101 63328094 - lincRNA NOVEL OTTHUMG00000017020.2 144994 693 7 ENSG00000231061.1 LINC00395 chr13 63667681 63738018 - antisense NOVEL OTTHUMG00000017022.1 70338 669 8 ENSG00000274052.1 OR7E156P chr13 63742341 63742804 + unprocessed_pseudogene KNOWN OTTHUMG00000017021.2 464 464 1 ENSG00000235303.1 RP1-79C4.1 chr1 170598854 170647339 + lincRNA NOVEL OTTHUMG00000035230.1 48486 1923 3 ENSG00000237378.2 RP11-473M10.3 chr13 63746741 63751080 + lincRNA NOVEL OTTHUMG00000017023.2 4340 2034 4 ENSG00000202478.1 RNU6-81P chr13 63783801 63783904 + snRNA KNOWN NA 104 104 1 ENSG00000213232.2 PPP1R2P10 chr13 63811014 63811608 - processed_pseudogene KNOWN OTTHUMG00000017024.1 595 595 1 ENSG00000219926.9 RP11-394A14.2 chr13 63828840 63844125 - lincRNA NOVEL OTTHUMG00000017025.4 15286 3555 13 ENSG00000278380.1 OR7E104P chr13 63836994 63837456 - unprocessed_pseudogene KNOWN OTTHUMG00000017026.2 463 463 1 ENSG00000272299.1 RP11-394A14.4 chr13 63837295 63838031 - lincRNA NOVEL OTTHUMG00000185729.1 737 737 1 ENSG00000237849.1 NFYAP1 chr13 63975451 63976422 - processed_pseudogene KNOWN OTTHUMG00000017027.1 972 972 1 ENSG00000227674.1 LINC00355 chr13 63986371 64076011 - lincRNA NOVEL OTTHUMG00000017028.1 89641 1878 6 ENSG00000277097.1 AL356253.1 chr13 64712008 64712072 - miRNA NOVEL NA 65 65 1 ENSG00000214269.3 LGMNP1 chr13 64958097 64959396 - processed_pseudogene KNOWN OTTHUMG00000017029.1 1300 1300 1 ENSG00000116132.10 PRRX1 chr1 170662728 170739419 + protein_coding KNOWN OTTHUMG00000035231.6 76692 8246 26 ENSG00000214266.2 STARP1 chr13 65309855 65310953 - processed_pseudogene KNOWN OTTHUMG00000017030.1 1099 869 2 ENSG00000236565.3 HNRNPA3P5 chr13 65787932 65788764 - processed_pseudogene KNOWN OTTHUMG00000017031.2 833 833 1 ENSG00000221685.1 AL354775.1 chr13 65864173 65864266 + miRNA NOVEL NA 94 94 1 ENSG00000234767.1 LINC01052 chr13 65866174 65878219 + lincRNA NOVEL OTTHUMG00000017032.1 12046 496 3 ENSG00000263581.1 MIR548X2 chr13 65966330 65966429 - miRNA KNOWN NA 100 100 1 ENSG00000263561.1 MIR4704 chr13 66218250 66218324 + miRNA KNOWN NA 75 75 1 ENSG00000235737.1 TRIM60P19 chr13 66268997 66270458 + processed_pseudogene KNOWN OTTHUMG00000017033.1 1462 1462 1 ENSG00000184226.13 PCDH9 chr13 66302834 67230445 - protein_coding KNOWN OTTHUMG00000017040.5 927612 30944 22 ENSG00000234527.1 PCDH9-AS1 chr13 66303871 66323561 + antisense NOVEL OTTHUMG00000017034.1 19691 532 2 ENSG00000238500.1 RNU7-87P chr13 66630715 66630776 - snRNA KNOWN NA 62 62 1 ENSG00000271811.1 RP1-79C4.4 chr1 170667381 170669425 + lincRNA NOVEL OTTHUMG00000185301.1 2045 2045 1 ENSG00000228842.3 PCDH9-AS2 chr13 66825169 66915031 + antisense KNOWN OTTHUMG00000017037.3 89863 675 8 ENSG00000225263.1 PCDH9-AS3 chr13 66977432 66985776 + antisense NOVEL OTTHUMG00000017038.1 8345 479 3 ENSG00000233840.1 PCDH9-AS4 chr13 66990886 67002007 + antisense NOVEL OTTHUMG00000017036.1 11122 436 3 ENSG00000214263.2 RPSAP53 chr13 67266845 67267706 - processed_pseudogene KNOWN OTTHUMG00000017039.1 862 862 1 ENSG00000230040.1 LINC00364 chr13 67372387 67379976 + lincRNA KNOWN OTTHUMG00000017041.1 7590 611 3 ENSG00000271287.1 BCRP9 chr13 67790407 67790794 + processed_pseudogene KNOWN OTTHUMG00000184867.1 388 388 1 ENSG00000227969.1 NPM1P22 chr13 67831876 67832827 - processed_pseudogene KNOWN OTTHUMG00000017044.1 952 952 1 ENSG00000231667.2 OR7E111P chr13 67902208 67903221 + unprocessed_pseudogene KNOWN OTTHUMG00000017042.2 1014 1014 1 ENSG00000226537.2 OR7E33P chr13 67910986 67911951 + unprocessed_pseudogene KNOWN OTTHUMG00000017043.2 966 966 1 ENSG00000234765.1 ELL2P3 chr13 68289679 68291280 - processed_pseudogene KNOWN OTTHUMG00000017046.1 1602 1602 1 ENSG00000116670.13 MAD2L2 chr1 11674480 11691650 - protein_coding KNOWN OTTHUMG00000002231.3 17171 3324 69 ENSG00000117501.13 MROH9 chr1 170935471 171064765 + protein_coding KNOWN OTTHUMG00000041456.1 129295 3831 43 ENSG00000229910.1 HNRNPA1P18 chr13 68301605 68303302 - processed_pseudogene KNOWN OTTHUMG00000017045.1 1698 927 2 ENSG00000236433.1 RPL37P21 chr13 68331338 68331613 - processed_pseudogene KNOWN OTTHUMG00000017047.1 276 276 1 ENSG00000230405.1 RPS3AP52 chr13 68634190 68634486 + processed_pseudogene KNOWN OTTHUMG00000017048.1 297 297 1 ENSG00000229824.1 RPL12P34 chr13 68654572 68655050 + processed_pseudogene KNOWN OTTHUMG00000017049.1 479 479 1 ENSG00000243671.3 RN7SL761P chr13 68693804 68694081 - misc_RNA KNOWN NA 278 278 1 ENSG00000281778.1 LINC00550 chr13 68861284 68885325 - lincRNA KNOWN OTTHUMG00000189544.1 24042 3614 5 ENSG00000280580.1 RP11-411G9.2 chr13 68878380 68893573 + lincRNA NOVEL OTTHUMG00000189545.1 15194 461 6 ENSG00000232380.1 ZDHHC20P4 chr13 68985058 68986064 + processed_pseudogene KNOWN OTTHUMG00000017050.1 1007 1007 1 ENSG00000225501.1 SNRPFP3 chr13 69101832 69102056 - processed_pseudogene KNOWN OTTHUMG00000017051.1 225 225 1 ENSG00000237534.1 LINC00383 chr13 69222346 69292154 + lincRNA NOVEL OTTHUMG00000017052.1 69809 817 4 ENSG00000281281.1 BX284613.1 chr1 171041347 171041435 - miRNA NOVEL NA 89 89 1 ENSG00000235221.1 LINC00401 chr13 69311333 69322101 + lincRNA NOVEL OTTHUMG00000017053.1 10769 821 2 ENSG00000224640.1 SRSF1P1 chr13 69408216 69408735 - processed_pseudogene KNOWN OTTHUMG00000017054.1 520 520 1 ENSG00000150361.10 KLHL1 chr13 69700594 70108493 - protein_coding KNOWN OTTHUMG00000017056.3 407900 4149 21 ENSG00000207495.1 RNY3P10 chr13 69802940 69803041 + misc_RNA KNOWN NA 102 102 1 ENSG00000232314.1 PSMC1P13 chr13 69894101 69895085 - processed_pseudogene KNOWN OTTHUMG00000017055.1 985 985 1 ENSG00000230223.5 ATXN8OS chr13 70107213 70139429 + antisense KNOWN OTTHUMG00000017057.2 32217 1954 9 ENSG00000202433.1 RNU6-54P chr13 70459464 70459570 + snRNA KNOWN NA 107 107 1 ENSG00000276841.1 RP11-475F14.1 chr13 70564267 70564437 - unprocessed_pseudogene KNOWN OTTHUMG00000187811.1 171 171 1 ENSG00000275653.1 AL391123.1 chr13 70901151 70901241 - miRNA NOVEL NA 91 91 1 ENSG00000226554.1 MTCL1P1 chr13 70923664 70924455 + processed_pseudogene KNOWN OTTHUMG00000017058.1 792 792 1 ENSG00000226552.2 RP5-1092L12.2 chr1 171083565 171085205 + processed_pseudogene KNOWN OTTHUMG00000041457.1 1641 1641 1 ENSG00000226846.1 LINC00348 chr13 71015141 71168417 + lincRNA NOVEL OTTHUMG00000017059.1 153277 948 4 ENSG00000225801.1 RABEPKP1 chr13 71296210 71297235 + processed_pseudogene KNOWN OTTHUMG00000017060.1 1026 1026 1 ENSG00000276644.3 DACH1 chr13 71437966 71867192 - protein_coding KNOWN OTTHUMG00000017063.3 429227 5389 38 ENSG00000236534.1 H3F3BP1 chr13 71675067 71675469 + processed_pseudogene KNOWN OTTHUMG00000017061.1 403 403 1 ENSG00000237816.1 RPL21P109 chr13 71704181 71704655 + processed_pseudogene KNOWN OTTHUMG00000017062.2 475 475 1 ENSG00000233460.1 RPL35AP31 chr13 71845981 71846317 + processed_pseudogene KNOWN OTTHUMG00000017064.1 337 337 1 ENSG00000232881.2 RPS10P21 chr13 71913704 71914178 - processed_pseudogene KNOWN OTTHUMG00000017065.2 475 475 1 ENSG00000200037.1 RNA5SP32 chr13 71978088 71978206 + rRNA KNOWN NA 119 119 1 ENSG00000212377.1 SNORD37 chr13 72453902 72453967 - snoRNA NOVEL NA 66 66 1 ENSG00000227952.2 RPL18AP17 chr13 72460132 72460329 - processed_pseudogene KNOWN OTTHUMG00000017066.2 198 198 1 ENSG00000007933.11 FMO3 chr1 171090877 171117819 + protein_coding KNOWN OTTHUMG00000035505.3 26943 3463 29 ENSG00000251715.1 SNORA68 chr13 72460519 72460601 - snoRNA NOVEL NA 83 83 1 ENSG00000278113.1 uc_338 chr13 72567213 72567380 + misc_RNA NOVEL NA 168 168 1 ENSG00000199282.1 SNORA9 chr13 72586680 72586810 + snoRNA NOVEL NA 131 131 1 ENSG00000226617.1 RPL21P110 chr13 72703693 72704138 + processed_pseudogene KNOWN OTTHUMG00000017067.1 446 446 1 ENSG00000206922.1 RNU6-80P chr13 72706017 72706123 - snRNA KNOWN NA 107 107 1 ENSG00000204899.5 MZT1 chr13 72708357 72727687 - protein_coding KNOWN OTTHUMG00000017069.1 19331 2299 3 ENSG00000136122.14 BORA chr13 72727749 72756198 + protein_coding KNOWN OTTHUMG00000017068.4 28450 3189 60 ENSG00000083520.13 DIS3 chr13 72752169 72782096 - protein_coding KNOWN OTTHUMG00000017070.4 29928 10835 88 ENSG00000083535.14 PIBF1 chr13 72782059 73016461 + protein_coding KNOWN OTTHUMG00000017071.3 234403 4253 62 ENSG00000220981.1 AL391384.1 chr13 72851088 72851169 + miRNA NOVEL NA 82 82 1 ENSG00000221390.1 MIR1295A chr1 171101728 171101806 - miRNA KNOWN NA 79 79 1 ENSG00000199381.1 RNU6-79P chr13 72881108 72881214 - snRNA KNOWN NA 107 107 1 ENSG00000232041.1 PSMD10P3 chr13 73036401 73036848 + processed_pseudogene KNOWN OTTHUMG00000017072.1 448 448 1 ENSG00000102554.12 KLF5 chr13 73054976 73077542 + protein_coding KNOWN OTTHUMG00000017074.2 22567 3893 14 ENSG00000236972.2 FABP5P1 chr13 73100575 73100985 - processed_pseudogene KNOWN OTTHUMG00000017073.1 411 411 1 ENSG00000200267.1 RNU6-66P chr13 73112915 73113018 - snRNA KNOWN NA 104 104 1 ENSG00000265959.1 AL354720.1 chr13 73124712 73124810 - miRNA NOVEL NA 99 99 1 ENSG00000201253.1 RNU4-10P chr13 73191528 73191667 + snRNA KNOWN NA 140 140 1 ENSG00000206697.1 RNY1P8 chr13 73227147 73227260 + misc_RNA KNOWN NA 114 114 1 ENSG00000279754.1 RP11-309J13.1 chr13 73399031 73399205 + TEC KNOWN OTTHUMG00000176037.1 175 175 1 ENSG00000229708.1 MARK2P12 chr13 73407768 73408352 - processed_pseudogene KNOWN OTTHUMG00000017075.1 585 585 1 ENSG00000117507.4 FMO6P chr1 171137740 171161568 + protein_coding KNOWN OTTHUMG00000035503.5 23829 2534 15 ENSG00000224853.1 LINC00393 chr13 73413473 73648253 - lincRNA NOVEL OTTHUMG00000017077.1 234781 649 4 ENSG00000228295.1 LINC00392 chr13 73564244 73588070 + lincRNA NOVEL OTTHUMG00000017076.1 23827 557 3 ENSG00000118922.15 KLF12 chr13 73686089 74133905 - protein_coding KNOWN OTTHUMG00000017078.2 447817 11090 19 ENSG00000280348.1 RP11-552M6.1 chr13 73800074 73802203 + TEC KNOWN OTTHUMG00000189131.1 2130 2130 1 ENSG00000279463.1 RP11-157H4.1 chr13 73844683 73845130 - sense_intronic NOVEL OTTHUMG00000189132.1 448 448 1 ENSG00000235532.1 LINC00402 chr13 74231457 74259976 + lincRNA NOVEL OTTHUMG00000017079.1 28520 3340 2 ENSG00000206617.1 RNY1P5 chr13 74289100 74289214 - misc_RNA KNOWN NA 115 115 1 ENSG00000232701.1 RPL21P108 chr13 74377163 74377951 - processed_pseudogene KNOWN OTTHUMG00000017080.1 789 481 2 ENSG00000177596.1 RP11-512C24.3 chr13 74412957 74419115 - lincRNA NOVEL OTTHUMG00000187427.1 6159 2328 2 ENSG00000226240.1 LINC00381 chr13 74419173 74435159 + lincRNA NOVEL OTTHUMG00000017081.1 15987 727 5 ENSG00000094963.12 FMO2 chr1 171185208 171212683 + protein_coding KNOWN OTTHUMG00000035504.6 27476 6239 40 ENSG00000281167.1 RP11-285E18.2 chr13 74434538 74555515 + lincRNA NOVEL OTTHUMG00000189708.1 120978 880 7 ENSG00000236678.6 LINC00347 chr13 74552503 74565445 + lincRNA NOVEL OTTHUMG00000017082.4 12943 3957 19 ENSG00000225944.1 RIOK3P1 chr13 74828553 74830080 + processed_pseudogene KNOWN OTTHUMG00000017083.1 1528 1528 1 ENSG00000206812.1 RNU6-38P chr13 75109587 75109693 + snRNA KNOWN NA 107 107 1 ENSG00000226665.1 SSR1P2 chr13 75136154 75136940 + processed_pseudogene KNOWN OTTHUMG00000017084.1 787 787 1 ENSG00000214249.3 CTAGE11P chr13 75237944 75240296 - processed_pseudogene KNOWN OTTHUMG00000017085.1 2353 2353 1 ENSG00000223880.1 LINC01078 chr13 75250480 75252012 + lincRNA NOVEL OTTHUMG00000017086.1 1533 387 2 ENSG00000136111.11 TBC1D4 chr13 75284665 75482114 - protein_coding KNOWN OTTHUMG00000017088.1 197450 6658 78 ENSG00000225203.2 RP11-182M20.2 chr13 75375511 75377294 - antisense NOVEL OTTHUMG00000017087.2 1784 425 3 ENSG00000188243.11 COMMD6 chr13 75525219 75549439 - protein_coding KNOWN OTTHUMG00000017089.4 24221 2897 45 ENSG00000225243.4 RP1-127D3.4 chr1 171199244 171227788 - antisense NOVEL OTTHUMG00000035507.1 28545 796 8 ENSG00000118939.16 UCHL3 chr13 75549480 75606020 + protein_coding KNOWN OTTHUMG00000017090.4 56541 1905 37 ENSG00000261553.4 RP11-29G8.3 chr13 75549773 75807120 + processed_transcript NOVEL OTTHUMG00000172802.1 257348 4178 21 ENSG00000261105.4 LMO7-AS1 chr13 75604700 75635994 - antisense NOVEL OTTHUMG00000172803.1 31295 593 7 ENSG00000136153.18 LMO7 chr13 75620434 75859870 + protein_coding KNOWN OTTHUMG00000017093.15 239437 14367 301 ENSG00000228444.2 RP11-173B14.4 chr13 75631271 75632135 + sense_intronic NOVEL OTTHUMG00000017091.2 865 865 1 ENSG00000230902.1 FAM204CP chr13 75688556 75689197 - processed_pseudogene KNOWN OTTHUMG00000017092.1 642 642 1 ENSG00000178734.5 LMO7DN chr13 75871038 75883811 + protein_coding KNOWN OTTHUMG00000187426.1 12774 1167 4 ENSG00000223458.2 LMO7DN-IT1 chr13 75876886 75881127 + sense_intronic NOVEL OTTHUMG00000017094.2 4242 321 4 ENSG00000261206.1 LINC00561 chr13 75932395 75935132 - lincRNA NOVEL OTTHUMG00000176038.1 2738 2738 1 ENSG00000224933.2 LINC01034 chr13 76013023 76014501 - lincRNA NOVEL OTTHUMG00000017095.2 1479 277 2 ENSG00000231424.2 RP1-45C12.1 chr1 171247580 171251794 - antisense NOVEL OTTHUMG00000035508.2 4215 416 2 ENSG00000243274.3 RN7SL571P chr13 76134931 76135225 + misc_RNA KNOWN NA 295 295 1 ENSG00000178695.5 KCTD12 chr13 76880166 76886390 - protein_coding KNOWN OTTHUMG00000017096.3 6225 6225 1 ENSG00000264908.1 AC000403.1 chr13 76886321 76886400 - miRNA NOVEL NA 80 80 1 ENSG00000278727.1 AC000403.4 chr13 76887551 76891135 + lincRNA NOVEL OTTHUMG00000187228.1 3585 3585 1 ENSG00000118903.6 BTF3P11 chr13 76928066 76928836 + processed_pseudogene KNOWN OTTHUMG00000017097.2 771 477 2 ENSG00000102794.8 IRG1 chr13 76948497 76958642 + protein_coding KNOWN OTTHUMG00000017098.1 10146 2177 9 ENSG00000233873.1 RPL7P44 chr13 76981175 76981916 - processed_pseudogene KNOWN OTTHUMG00000017102.1 742 742 1 ENSG00000228002.2 DHX9P1 chr13 76984868 76987943 + processed_pseudogene KNOWN OTTHUMG00000017101.2 3076 3076 1 ENSG00000102805.12 CLN5 chr13 76990660 77002517 + protein_coding KNOWN OTTHUMG00000017100.4 11858 4226 11 ENSG00000005812.9 FBXL3 chr13 76992598 77027195 - protein_coding KNOWN OTTHUMG00000017099.4 34598 7082 19 ENSG00000010932.14 FMO1 chr1 171248471 171285978 + protein_coding KNOWN OTTHUMG00000035502.2 37508 3602 58 ENSG00000274898.1 AC001226.7 chr13 77027944 77028482 + lincRNA NOVEL OTTHUMG00000187232.1 539 539 1 ENSG00000005810.16 MYCBP2 chr13 77044655 77327050 - protein_coding KNOWN OTTHUMG00000017105.4 282396 15945 227 ENSG00000236051.5 MYCBP2-AS1 chr13 77075514 77129717 + antisense NOVEL OTTHUMG00000017104.3 54204 3382 24 ENSG00000229521.2 MYCBP2-AS2 chr13 77080511 77081190 - sense_intronic NOVEL OTTHUMG00000017103.2 680 428 2 ENSG00000136155.15 SCEL chr13 77535674 77645263 + protein_coding KNOWN OTTHUMG00000017107.3 109590 4205 125 ENSG00000224347.5 SCEL-AS1 chr13 77599755 77606551 - antisense NOVEL OTTHUMG00000017106.2 6797 570 7 ENSG00000206800.1 RNY3P7 chr13 77623372 77623472 + misc_RNA KNOWN NA 101 101 1 ENSG00000227922.1 SPTLC1P5 chr13 77659413 77659664 + processed_pseudogene KNOWN OTTHUMG00000017109.1 252 252 1 ENSG00000139737.20 SLAIN1 chr13 77697854 77764242 + protein_coding KNOWN OTTHUMG00000017110.8 66389 4133 84 ENSG00000266325.1 MIR3665 chr13 77698012 77698116 - miRNA KNOWN NA 105 105 1 ENSG00000162490.6 DRAXIN chr1 11691729 11725857 + protein_coding KNOWN OTTHUMG00000002227.1 34129 7346 7 ENSG00000206692.1 Y_RNA chr1 171253906 171254022 - misc_RNA NOVEL NA 117 117 1 ENSG00000225579.1 EDNRB-AS1 chr13 77828222 77833950 + lincRNA NOVEL OTTHUMG00000017113.1 5729 601 5 ENSG00000136160.13 EDNRB chr13 77895481 77919768 - protein_coding KNOWN OTTHUMG00000017111.4 24288 5014 24 ENSG00000234377.6 RNF219-AS1 chr13 77919689 78617328 + antisense KNOWN OTTHUMG00000185746.4 697640 8790 62 ENSG00000233379.1 RP11-318G21.4 chr13 77939162 77944874 - lincRNA NOVEL OTTHUMG00000017114.1 5713 902 2 ENSG00000243035.3 RN7SL810P chr13 77947497 77947772 - misc_RNA KNOWN NA 276 276 1 ENSG00000236133.1 LINC01069 chr13 77989372 77990646 - lincRNA NOVEL OTTHUMG00000017112.1 1275 546 2 ENSG00000229249.5 LINC00446 chr13 78012883 78053595 + lincRNA NOVEL OTTHUMG00000017115.2 40713 670 9 ENSG00000235625.1 RP11-203P2.2 chr13 78275720 78277514 - lincRNA NOVEL OTTHUMG00000017117.1 1795 342 2 ENSG00000271386.1 SRGNP1 chr13 78285838 78286288 + processed_pseudogene KNOWN OTTHUMG00000184868.1 451 451 1 ENSG00000200686.1 RNY3P3 chr13 78355227 78355328 - misc_RNA KNOWN NA 102 102 1 ENSG00000230547.1 HMGB1P11 chr1 171270954 171271590 - processed_pseudogene KNOWN OTTHUMG00000035509.1 637 637 1 ENSG00000229865.1 RPL31P54 chr13 78422823 78423192 + processed_pseudogene KNOWN OTTHUMG00000017118.1 370 370 1 ENSG00000224686.1 TCEB1P23 chr13 78488182 78488513 + processed_pseudogene KNOWN OTTHUMG00000017120.1 332 332 1 ENSG00000271776.1 RP11-52L5.6 chr13 78596129 78599619 + antisense NOVEL OTTHUMG00000185376.1 3491 3491 1 ENSG00000152192.7 POU4F1 chr13 78598362 78603560 - protein_coding KNOWN OTTHUMG00000017119.4 5199 4547 2 ENSG00000152193.7 RNF219 chr13 78614291 78659179 - protein_coding KNOWN OTTHUMG00000017122.1 44889 3529 6 ENSG00000263868.1 AL139319.1 chr13 78665838 78665930 + miRNA NOVEL NA 93 93 1 ENSG00000237109.1 RPL21P111 chr13 78761175 78761651 + processed_pseudogene KNOWN OTTHUMG00000017125.1 477 477 1 ENSG00000225427.1 LINC00331 chr13 78787319 78792307 - lincRNA NOVEL OTTHUMG00000017124.1 4989 376 3 ENSG00000215357.2 HSPD1P8 chr13 78849231 78851208 + processed_pseudogene KNOWN OTTHUMG00000017123.1 1978 1658 2 ENSG00000230584.1 CCT5P2 chr13 78908919 78910542 + processed_pseudogene KNOWN OTTHUMG00000017126.1 1624 1624 1 ENSG00000076258.8 FMO4 chr1 171314208 171342084 + protein_coding KNOWN OTTHUMG00000035506.1 27877 2517 26 ENSG00000236277.1 NIPA2P5 chr13 79090783 79094119 + processed_pseudogene KNOWN OTTHUMG00000017127.1 3337 464 2 ENSG00000226670.1 BCAS2P3 chr13 79166119 79166885 + processed_pseudogene KNOWN OTTHUMG00000017128.1 767 767 1 ENSG00000139746.14 RBM26 chr13 79311824 79406477 - protein_coding KNOWN OTTHUMG00000017133.8 94654 10122 96 ENSG00000252496.1 RNA5SP33 chr13 79389534 79389631 - rRNA KNOWN NA 98 98 1 ENSG00000227354.5 RBM26-AS1 chr13 79406309 79424328 + antisense NOVEL OTTHUMG00000017131.2 18020 3747 19 ENSG00000232132.1 NDFIP2-AS1 chr13 79477364 79481231 - antisense NOVEL OTTHUMG00000017134.1 3868 431 3 ENSG00000102471.12 NDFIP2 chr13 79481124 79556075 + protein_coding KNOWN OTTHUMG00000017136.7 74952 4831 41 ENSG00000227676.3 LINC01068 chr13 79566727 79571436 + lincRNA NOVEL OTTHUMG00000017135.3 4710 724 5 ENSG00000229011.1 LINC01038 chr13 79804418 79805685 + lincRNA NOVEL OTTHUMG00000017137.1 1268 428 2 ENSG00000229175.1 LINC00382 chr13 79872586 79917944 + lincRNA NOVEL OTTHUMG00000017139.1 45359 890 6 ENSG00000225704.2 RP4-798A17.5 chr1 171345089 171345320 + processed_pseudogene KNOWN OTTHUMG00000035500.2 232 232 1 ENSG00000281721.1 LINC01080 chr13 80011077 80028283 + lincRNA KNOWN OTTHUMG00000189563.1 17207 2242 2 ENSG00000136158.9 SPRY2 chr13 80335976 80340951 - protein_coding KNOWN OTTHUMG00000017140.2 4976 3038 7 ENSG00000202398.1 RNU6-61P chr13 80369426 80369534 - snRNA KNOWN NA 109 109 1 ENSG00000227862.1 HNRNPA1P31 chr13 80619098 80620067 - processed_pseudogene KNOWN OTTHUMG00000017141.1 970 970 1 ENSG00000226683.2 PWWP2AP1 chr13 80654755 80657027 + processed_pseudogene KNOWN OTTHUMG00000017142.2 2273 2273 1 ENSG00000231222.1 ARF4P4 chr13 80888348 80888867 + processed_pseudogene KNOWN OTTHUMG00000017143.1 520 520 1 ENSG00000229246.1 LINC00377 chr13 81043670 81044442 + lincRNA NOVEL OTTHUMG00000017144.1 773 657 2 ENSG00000270415.1 DPPA3P3 chr13 81114866 81115295 - processed_pseudogene KNOWN OTTHUMG00000184734.1 430 430 1 ENSG00000238980.2 AL354806.1 chr13 81204263 81204356 - miRNA NOVEL NA 94 94 1 ENSG00000260094.1 LINC00564 chr13 81225865 81226983 - lincRNA NOVEL OTTHUMG00000176051.1 1119 1119 1 ENSG00000268062.1 TOP1P1 chr1 171345105 171345307 - processed_pseudogene KNOWN OTTHUMG00000035501.2 203 203 1 ENSG00000229309.2 RP11-452B18.2 chr13 81250438 81302407 + lincRNA NOVEL OTTHUMG00000017146.2 51970 382 6 ENSG00000222486.1 RNU6-77P chr13 81265747 81265837 + snRNA KNOWN NA 91 91 1 ENSG00000237148.1 HIGD1AP2 chr13 81272891 81273170 + processed_pseudogene KNOWN OTTHUMG00000017145.1 280 280 1 ENSG00000214182.5 PTMAP5 chr13 81689911 81691072 + transcribed_processed_pseudogene KNOWN OTTHUMG00000017147.4 1162 1162 2 ENSG00000237099.1 GYG1P2 chr13 82823131 82824136 + processed_pseudogene KNOWN OTTHUMG00000017148.1 1006 1006 1 ENSG00000270400.1 RP11-464I4.1 chr13 83145540 83145903 + processed_pseudogene KNOWN OTTHUMG00000184873.1 364 364 1 ENSG00000222791.1 RNU6-67P chr13 83298071 83298167 - snRNA KNOWN NA 97 97 1 ENSG00000178235.7 SLITRK1 chr13 83877205 83882393 - protein_coding KNOWN OTTHUMG00000017149.1 5189 5189 1 ENSG00000215037.2 VENTXP2 chr13 83907301 83907781 - processed_pseudogene KNOWN OTTHUMG00000017150.1 481 481 1 ENSG00000224188.1 UBE2D3P4 chr13 84020327 84020762 + processed_pseudogene KNOWN OTTHUMG00000017151.1 436 436 1 ENSG00000239428.2 GM2AP2 chr1 171392229 171392790 + processed_pseudogene KNOWN OTTHUMG00000158542.2 562 562 1 ENSG00000228597.1 MTND4P1 chr13 84520103 84521568 + processed_pseudogene KNOWN OTTHUMG00000017153.1 1466 1466 1 ENSG00000232447.1 MTND5P3 chr13 84521725 84523915 + processed_pseudogene KNOWN OTTHUMG00000017152.1 2191 1800 2 ENSG00000233349.1 LINC00333 chr13 84562364 84563236 + lincRNA NOVEL OTTHUMG00000017154.1 873 613 3 ENSG00000226370.1 LINC00375 chr13 85065087 85078920 - lincRNA NOVEL OTTHUMG00000017155.1 13834 601 5 ENSG00000226317.2 LINC00351 chr13 85363601 85544570 + lincRNA NOVEL OTTHUMG00000017156.2 180970 911 4 ENSG00000207012.1 RNU6-72P chr13 85584748 85584853 - snRNA KNOWN NA 106 106 1 ENSG00000184564.8 SLITRK6 chr13 85792790 85799488 - protein_coding KNOWN OTTHUMG00000017157.3 6699 4318 2 ENSG00000278580.1 RP11-272M24.2 chr13 85837126 85837532 - unprocessed_pseudogene KNOWN OTTHUMG00000187812.1 407 407 1 ENSG00000228241.1 MOB1AP1 chr13 85968999 85969533 + processed_pseudogene KNOWN OTTHUMG00000017158.1 535 535 1 ENSG00000232252.1 RP11-30L8.1 chr13 86060813 86170890 + lincRNA NOVEL OTTHUMG00000017159.1 110078 194 3 ENSG00000202082.1 RNU6-290P chr1 171418644 171418750 - snRNA KNOWN NA 107 107 1 ENSG00000277914.1 DDX6P2 chr13 86275493 86277262 + processed_pseudogene KNOWN OTTHUMG00000017160.2 1770 1455 2 ENSG00000231879.1 TXNL1P1 chr13 86725500 86726053 + processed_pseudogene KNOWN OTTHUMG00000017161.1 554 554 1 ENSG00000233528.4 LINC00430 chr13 86909586 86937108 + lincRNA NOVEL OTTHUMG00000017162.5 27523 776 6 ENSG00000228074.1 UBBP5 chr13 87219004 87219269 + processed_pseudogene KNOWN OTTHUMG00000017163.1 266 266 1 ENSG00000228473.1 LIN28AP2 chr13 87379472 87380258 - processed_pseudogene KNOWN OTTHUMG00000017164.1 787 458 2 ENSG00000232636.2 RP11-342C20.2 chr13 87427200 87447235 - lincRNA NOVEL OTTHUMG00000017165.2 20036 666 4 ENSG00000228824.5 MIR4500HG chr13 87427214 87671259 - lincRNA NOVEL OTTHUMG00000017166.3 244046 3273 20 ENSG00000272515.1 RP11-29P20.1 chr13 87607907 87609234 - lincRNA NOVEL OTTHUMG00000185757.1 1328 1328 1 ENSG00000266052.1 MIR4500 chr13 87618665 87618740 - miRNA KNOWN NA 76 76 1 ENSG00000165300.7 SLITRK5 chr13 87672615 87696272 + protein_coding KNOWN OTTHUMG00000017167.4 23658 21103 2 ENSG00000234333.2 CYCSP53 chr1 171444699 171444963 - processed_pseudogene KNOWN OTTHUMG00000057643.2 265 265 1 ENSG00000277640.1 RP11-471M2.4 chr13 87765752 87765881 - processed_pseudogene KNOWN OTTHUMG00000187822.1 130 130 1 ENSG00000223404.3 LINC00397 chr13 87801036 87803808 - lincRNA NOVEL OTTHUMG00000017169.3 2773 634 5 ENSG00000272046.1 RP11-471M2.3 chr13 87807634 87811232 - lincRNA NOVEL OTTHUMG00000185728.1 3599 3599 1 ENSG00000232204.1 TET1P1 chr13 87890172 87892472 - processed_pseudogene KNOWN OTTHUMG00000017168.1 2301 2301 1 ENSG00000231019.1 RP11-545P6.2 chr13 88142867 88236082 + lincRNA NOVEL OTTHUMG00000155300.2 93216 561 5 ENSG00000223059.1 AL354896.1 chr13 88187859 88187920 - miRNA NOVEL NA 62 62 1 ENSG00000225289.1 RPL29P29 chr13 88236547 88236969 - processed_pseudogene KNOWN OTTHUMG00000017170.2 423 423 1 ENSG00000229443.1 LINC00433 chr13 88540864 88545509 + lincRNA NOVEL OTTHUMG00000017171.1 4646 1055 5 ENSG00000261666.1 LINC00560 chr13 88626853 88630397 + lincRNA NOVEL OTTHUMG00000176053.1 3545 1599 2 ENSG00000233211.2 GRPEL2P1 chr13 88978447 88978785 - processed_pseudogene KNOWN OTTHUMG00000017172.2 339 339 1 ENSG00000117523.14 PRRC2C chr1 171485551 171593511 + protein_coding KNOWN OTTHUMG00000034665.8 107961 13921 164 ENSG00000232225.5 LINC01047 chr13 89214847 89236890 - lincRNA NOVEL OTTHUMG00000017173.2 22044 946 9 ENSG00000227247.1 TRIM60P13 chr13 89248818 89250100 - processed_pseudogene KNOWN OTTHUMG00000017174.1 1283 1283 1 ENSG00000234660.1 LINC00440 chr13 89273203 89280240 + lincRNA NOVEL OTTHUMG00000017175.1 7038 734 2 ENSG00000225530.1 SP3P chr13 89361160 89363224 - processed_pseudogene KNOWN OTTHUMG00000017176.1 2065 2065 1 ENSG00000226037.1 LINC01040 chr13 89477608 89500509 - lincRNA NOVEL OTTHUMG00000017177.1 22902 666 2 ENSG00000236176.2 LINC00353 chr13 89548691 89553804 - lincRNA NOVEL OTTHUMG00000017179.1 5114 685 3 ENSG00000271395.1 RP11-75N6.3 chr13 89551233 89552389 + lincRNA NOVEL OTTHUMG00000184176.1 1157 330 2 ENSG00000275813.1 AL355821.1 chr13 89783883 89783968 - miRNA NOVEL NA 86 86 1 ENSG00000234227.1 RPL7L1P1 chr13 89833157 89833941 - processed_pseudogene KNOWN OTTHUMG00000017180.1 785 785 1 ENSG00000200733.1 SNORD38 chr13 89837170 89837237 + snoRNA NOVEL NA 68 68 1 ENSG00000239373.3 RN7SL425P chr1 171492411 171492704 + misc_RNA KNOWN NA 294 294 1 ENSG00000215418.2 PEX12P1 chr13 89991831 89992878 + processed_pseudogene KNOWN OTTHUMG00000017181.1 1048 1048 1 ENSG00000261446.2 LINC00559 chr13 90060247 90119719 - lincRNA NOVEL OTTHUMG00000176057.2 59473 3867 6 ENSG00000252696.1 RNA5SP34 chr13 90135712 90135841 - rRNA KNOWN NA 130 130 1 ENSG00000235879.1 FAR1P1 chr13 90170866 90171799 + processed_pseudogene KNOWN OTTHUMG00000017182.1 934 934 1 ENSG00000224419.1 KRT18P27 chr13 90230384 90231682 + processed_pseudogene KNOWN OTTHUMG00000017183.1 1299 1299 1 ENSG00000207858.1 MIR622 chr13 90231182 90231277 + miRNA KNOWN NA 96 96 1 ENSG00000234384.1 LINC01049 chr13 90493287 90535080 + lincRNA NOVEL OTTHUMG00000017184.1 41794 742 6 ENSG00000251753.1 RNU6-75P chr13 90781766 90781869 - snRNA KNOWN NA 104 104 1 ENSG00000231674.1 LINC00410 chr13 90890954 90926597 - lincRNA NOVEL OTTHUMG00000017185.1 35644 2018 6 ENSG00000227983.1 BRK1P2 chr13 91023732 91023954 - processed_pseudogene KNOWN OTTHUMG00000017186.1 223 223 1 ENSG00000177674.14 AGTRAP chr1 11736084 11754802 + protein_coding KNOWN OTTHUMG00000002230.5 18719 2435 68 ENSG00000201126.1 RNU6-773P chr1 171519816 171519913 - snRNA KNOWN NA 98 98 1 ENSG00000234625.1 LINC00380 chr13 91087254 91089593 - lincRNA NOVEL OTTHUMG00000017187.1 2340 353 2 ENSG00000229557.1 LINC00379 chr13 91127613 91131407 - lincRNA NOVEL OTTHUMG00000017188.1 3795 545 5 ENSG00000214178.3 PPIAP23 chr13 91272081 91272577 - processed_pseudogene KNOWN OTTHUMG00000017189.1 497 497 1 ENSG00000215417.9 MIR17HG chr13 91347820 91354579 + processed_transcript KNOWN OTTHUMG00000017195.3 6760 3492 9 ENSG00000275042.1 MIR17 chr13 91350605 91350688 + miRNA KNOWN NA 84 84 1 ENSG00000274160.1 AL162375.1 chr13 91350743 91350834 + miRNA NOVEL NA 92 92 1 ENSG00000277328.1 MIR19A chr13 91350891 91350972 + miRNA KNOWN NA 82 82 1 ENSG00000275534.1 MIR20A chr13 91351065 91351135 + miRNA KNOWN NA 71 71 1 ENSG00000275802.1 MIR19B1 chr13 91351192 91351278 + miRNA KNOWN NA 87 87 1 ENSG00000276018.1 MIR92A1 chr13 91351314 91351393 + miRNA KNOWN NA 80 80 1 ENSG00000276381.1 Z98750.1 chr1 171591083 171591145 + miRNA NOVEL NA 63 63 1 ENSG00000281253.1 AL138714.1 chr13 91379595 91379713 - miRNA NOVEL NA 119 119 1 ENSG00000179399.12 GPC5 chr13 91398675 92873682 + protein_coding KNOWN OTTHUMG00000017200.2 1475008 3476 16 ENSG00000280901.1 Y_RNA chr13 91585934 91586041 + misc_RNA NOVEL NA 108 108 1 ENSG00000252508.1 RNU4ATAC3P chr13 92059844 92059969 + snRNA KNOWN NA 126 126 1 ENSG00000229287.1 FABP5P4 chr13 92180715 92180885 - processed_pseudogene KNOWN OTTHUMG00000017196.2 171 171 1 ENSG00000232885.1 GPC5-AS2 chr13 92339794 92340603 - antisense NOVEL OTTHUMG00000017197.1 810 401 2 ENSG00000236240.1 GPC5-IT1 chr13 92484606 92510094 + sense_intronic NOVEL OTTHUMG00000017198.1 25489 658 2 ENSG00000263741.1 MIR548AS chr13 92490163 92490220 + miRNA KNOWN NA 58 58 1 ENSG00000235984.4 GPC5-AS1 chr13 92701389 92721614 - antisense NOVEL OTTHUMG00000017199.1 20226 461 8 ENSG00000232849.1 LINC00363 chr13 93056657 93057926 + lincRNA NOVEL OTTHUMG00000017201.1 1270 210 2 ENSG00000034971.13 MYOC chr1 171635417 171652683 - protein_coding KNOWN OTTHUMG00000034789.2 17267 2095 7 ENSG00000278177.1 RP11-632L2.2 chr13 93226612 93227317 - antisense NOVEL OTTHUMG00000187253.1 706 706 1 ENSG00000183098.9 GPC6 chr13 93226842 94407401 + protein_coding KNOWN OTTHUMG00000017205.4 1180560 6468 14 ENSG00000235784.2 HNRNPA1P29 chr13 93394977 93395855 - processed_pseudogene KNOWN OTTHUMG00000017202.2 879 879 1 ENSG00000224394.1 GPC6-AS2 chr13 93818424 93836144 - antisense NOVEL OTTHUMG00000017203.1 17721 587 3 ENSG00000212559.1 RNA5SP35 chr13 94025470 94025598 - rRNA KNOWN NA 129 129 1 ENSG00000236520.2 GPC6-AS1 chr13 94154193 94187991 - antisense NOVEL OTTHUMG00000017204.2 33799 698 4 ENSG00000080166.14 DCT chr13 94436808 94479682 - protein_coding KNOWN OTTHUMG00000017206.7 42875 7543 34 ENSG00000212057.1 AL139318.1 chr13 94465300 94465390 - miRNA NOVEL NA 91 91 1 ENSG00000088451.9 TGDS chr13 94574051 94596257 - protein_coding KNOWN OTTHUMG00000046308.3 22207 2589 22 ENSG00000152749.7 GPR180 chr13 94601903 94634645 + protein_coding KNOWN OTTHUMG00000017207.3 32743 8822 9 ENSG00000233328.3 PFN1P1 chr1 171670517 171670939 - processed_pseudogene KNOWN OTTHUMG00000034791.2 423 423 1 ENSG00000222129.1 RNA5SP36 chr13 94651397 94651529 - rRNA KNOWN NA 133 133 1 ENSG00000274168.1 Metazoa_SRP chr13 94699223 94699502 - misc_RNA NOVEL NA 280 280 1 ENSG00000238230.1 LINC00391 chr13 94699694 94702862 - lincRNA NOVEL OTTHUMG00000017212.1 3169 1844 3 ENSG00000125285.5 SOX21 chr13 94709622 94712399 - protein_coding KNOWN OTTHUMG00000017209.4 2778 2778 1 ENSG00000227640.2 SOX21-AS1 chr13 94712716 94716246 + lincRNA NOVEL OTTHUMG00000017213.2 3531 3287 2 ENSG00000235768.1 BRD7P5 chr13 94757451 94759272 - processed_pseudogene KNOWN OTTHUMG00000017211.1 1822 1822 1 ENSG00000237924.1 RPL21P112 chr13 94760553 94761015 - processed_pseudogene KNOWN OTTHUMG00000017210.1 463 463 1 ENSG00000260962.1 LINC00557 chr13 94960041 94961319 + lincRNA NOVEL OTTHUMG00000176061.1 1279 1279 1 ENSG00000252335.1 RNU6-62P chr13 95019235 95019336 + snRNA KNOWN NA 102 102 1 ENSG00000125257.12 ABCC4 chr13 95019829 95301446 - protein_coding KNOWN OTTHUMG00000017216.5 281618 7819 82 ENSG00000230364.1 RPL4P3 chr1 171683128 171684438 - processed_pseudogene KNOWN OTTHUMG00000034790.1 1311 1311 1 ENSG00000223298.1 RNY3P8 chr13 95310830 95310955 - misc_RNA KNOWN NA 126 126 1 ENSG00000200211.1 RNY4P27 chr13 95336106 95336201 - misc_RNA KNOWN NA 96 96 1 ENSG00000271492.1 MEMO1P5 chr13 95394049 95394454 + processed_pseudogene KNOWN OTTHUMG00000184874.1 406 406 1 ENSG00000134873.8 CLDN10 chr13 95433604 95579759 + protein_coding KNOWN OTTHUMG00000017217.3 146156 3380 12 ENSG00000223392.1 CLDN10-AS1 chr13 95479444 95533910 - antisense NOVEL OTTHUMG00000017220.1 54467 895 4 ENSG00000134874.16 DZIP1 chr13 95578202 95644703 - protein_coding KNOWN OTTHUMG00000017224.7 66502 8470 111 ENSG00000247400.3 DNAJC3-AS1 chr13 95648733 95676925 - lincRNA NOVEL OTTHUMG00000166152.2 28193 3010 4 ENSG00000102580.13 DNAJC3 chr13 95677139 95794989 + protein_coding KNOWN OTTHUMG00000017227.4 117851 5591 23 ENSG00000229622.1 MTND5P2 chr13 95692538 95693972 + processed_pseudogene KNOWN OTTHUMG00000017222.1 1435 1142 2 ENSG00000227714.1 MTND6P18 chr13 95693983 95694495 - processed_pseudogene KNOWN OTTHUMG00000017223.1 513 513 1 ENSG00000117533.13 VAMP4 chr1 171700160 171742247 - protein_coding KNOWN OTTHUMG00000034788.4 42088 5159 33 ENSG00000232373.2 MTCYBP3 chr13 95694569 95695705 + processed_pseudogene KNOWN OTTHUMG00000017221.2 1137 1137 1 ENSG00000276809.1 RP11-10E18.7 chr13 95744726 95745765 + sense_intronic NOVEL OTTHUMG00000188627.1 1040 1040 1 ENSG00000102595.17 UGGT2 chr13 95801580 96053482 - protein_coding KNOWN OTTHUMG00000017230.4 251903 8439 118 ENSG00000226977.1 HMGN1P24 chr13 95809310 95809607 - processed_pseudogene KNOWN OTTHUMG00000017228.1 298 298 1 ENSG00000185352.8 HS6ST3 chr13 96090839 96839562 + protein_coding KNOWN OTTHUMG00000017232.3 748724 7806 3 ENSG00000242614.3 RN7SL164P chr13 96169545 96169847 + misc_RNA KNOWN NA 303 303 1 ENSG00000233273.1 AMMECR1LP1 chr13 96573659 96574499 + processed_pseudogene KNOWN OTTHUMG00000017231.1 841 841 1 ENSG00000235137.2 HSP90AB6P chr13 96883842 96885821 - processed_pseudogene KNOWN OTTHUMG00000017233.1 1980 1980 1 ENSG00000243300.2 LINC00359 chr13 96941281 96984172 - lincRNA KNOWN OTTHUMG00000185759.1 42892 1004 5 ENSG00000234267.2 TULP3P1 chr13 96947637 96948927 - transcribed_processed_pseudogene KNOWN OTTHUMG00000017234.1 1291 1291 1 ENSG00000232261.1 RP4-560B9.5 chr1 171751543 171752025 - unprocessed_pseudogene KNOWN OTTHUMG00000057645.1 483 381 2 ENSG00000272329.1 RP11-65L19.4 chr13 96948018 96949584 + lincRNA NOVEL OTTHUMG00000185760.1 1567 1370 3 ENSG00000222472.1 RN7SKP7 chr13 96949249 96949533 - misc_RNA KNOWN NA 285 285 1 ENSG00000165621.7 OXGR1 chr13 96985719 96994730 - protein_coding KNOWN OTTHUMG00000017236.4 9012 2659 16 ENSG00000233124.1 LINC00456 chr13 97172469 97179622 - lincRNA NOVEL OTTHUMG00000017237.1 7154 692 2 ENSG00000139793.17 MBNL2 chr13 97221434 97394120 + protein_coding KNOWN OTTHUMG00000017239.4 172687 4908 46 ENSG00000202290.1 RNA5SP37 chr13 97362972 97363101 - rRNA KNOWN NA 130 130 1 ENSG00000281389.1 AL442067.1 chr13 97363007 97363069 - miRNA NOVEL NA 63 63 1 ENSG00000125249.6 RAP2A chr13 97434222 97469128 + protein_coding KNOWN OTTHUMG00000017240.6 34907 5570 5 ENSG00000276573.1 RP11-128N14.5 chr13 97435946 97436168 + sense_intronic NOVEL OTTHUMG00000189062.1 223 223 1 ENSG00000276704.1 RP11-128N14.4 chr13 97437268 97437630 + sense_intronic NOVEL OTTHUMG00000189063.1 363 363 1 ENSG00000271459.1 RP4-560B9.6 chr1 171755803 171756323 - processed_pseudogene KNOWN OTTHUMG00000184432.2 521 521 1 ENSG00000271625.1 PSMA6P4 chr13 97475742 97476459 + processed_pseudogene KNOWN OTTHUMG00000184875.1 718 718 1 ENSG00000226134.1 RP11-120E13.1 chr13 97675011 97677963 - lincRNA NOVEL OTTHUMG00000017241.1 2953 692 2 ENSG00000233291.1 RPL7AP61 chr13 97901653 97902288 + processed_pseudogene KNOWN OTTHUMG00000017243.1 636 636 1 ENSG00000270725.1 RP11-383H17.4 chr13 97939356 97953539 + lincRNA NOVEL OTTHUMG00000184177.1 14184 159 2 ENSG00000065150.17 IPO5 chr13 97953658 98024297 + protein_coding KNOWN OTTHUMG00000017244.5 70640 9671 239 ENSG00000232217.1 FTLP8 chr13 97986950 97987216 - processed_pseudogene KNOWN OTTHUMG00000017242.1 267 267 1 ENSG00000152767.14 FARP1 chr13 98142562 98455176 + protein_coding KNOWN OTTHUMG00000017248.5 312615 32419 225 ENSG00000139797.7 RNF113B chr13 98175785 98177265 - protein_coding KNOWN OTTHUMG00000017245.3 1481 1376 2 ENSG00000222969.1 RN7SKP8 chr13 98203835 98204192 - misc_RNA KNOWN NA 358 358 1 ENSG00000263399.1 MIR3170 chr13 98208524 98208600 + miRNA KNOWN NA 77 77 1 ENSG00000236741.4 RP4-560B9.4 chr1 171762074 171762524 + processed_pseudogene KNOWN OTTHUMG00000035055.2 451 451 1 ENSG00000269189.1 RP11-573N10.1 chr13 98233650 98234700 + sense_intronic NOVEL OTTHUMG00000182539.1 1051 1051 1 ENSG00000269599.1 RP11-261P24.2 chr13 98329655 98333236 - antisense NOVEL OTTHUMG00000017246.2 3582 508 2 ENSG00000231194.1 FARP1-AS1 chr13 98435405 98435840 - antisense NOVEL OTTHUMG00000017247.1 436 323 2 ENSG00000102572.13 STK24 chr13 98445185 98577940 - protein_coding KNOWN OTTHUMG00000017250.3 132756 12077 60 ENSG00000271437.1 RP11-295B17.6 chr13 98553243 98553780 + processed_pseudogene KNOWN OTTHUMG00000184876.1 538 538 1 ENSG00000224418.1 STK24-AS1 chr13 98577244 98578830 + antisense NOVEL OTTHUMG00000017249.1 1587 1278 2 ENSG00000217686.2 NUS1P4 chr13 98610292 98610876 - processed_pseudogene KNOWN OTTHUMG00000017251.1 585 585 1 ENSG00000233549.2 CYCSP35 chr13 98629686 98629989 - processed_pseudogene KNOWN OTTHUMG00000017252.2 304 304 1 ENSG00000233662.1 CALM2P4 chr13 98640814 98641239 - processed_pseudogene KNOWN OTTHUMG00000017253.1 426 426 1 ENSG00000243366.3 RN7SL60P chr13 98671980 98672278 + misc_RNA KNOWN NA 299 299 1 ENSG00000253060.1 SCARNA20 chr1 171768070 171768175 + scaRNA NOVEL NA 106 106 1 ENSG00000088386.14 SLC15A1 chr13 98683801 98752654 - protein_coding KNOWN OTTHUMG00000017255.4 68854 4192 60 ENSG00000088387.16 DOCK9 chr13 98793487 99086625 - protein_coding KNOWN OTTHUMG00000017260.4 293139 13945 413 ENSG00000229918.1 DOCK9-AS1 chr13 98832084 98834629 + antisense NOVEL OTTHUMG00000017256.1 2546 392 3 ENSG00000275919.1 RP11-155N3.4 chr13 98871742 98872005 + processed_pseudogene KNOWN OTTHUMG00000187815.1 264 264 1 ENSG00000231981.3 RPL7L1P12 chr13 98949719 98950447 - processed_pseudogene KNOWN OTTHUMG00000017257.2 729 729 1 ENSG00000207298.1 RNU6-83P chr13 99025234 99025345 + snRNA KNOWN NA 112 112 1 ENSG00000260992.1 DOCK9-AS2 chr13 99087819 99088625 + antisense NOVEL OTTHUMG00000176064.1 807 807 1 ENSG00000230871.1 RPS6P23 chr13 99173593 99174490 + processed_pseudogene KNOWN OTTHUMG00000017259.1 898 722 2 ENSG00000234005.3 GAPDHP22 chr13 99190579 99190991 - processed_pseudogene KNOWN OTTHUMG00000017258.1 413 413 1 ENSG00000228889.5 UBAC2-AS1 chr13 99196377 99200710 - lincRNA NOVEL OTTHUMG00000017261.2 4334 1771 4 ENSG00000223659.1 RP5-857K21.5 chr1 627377 629010 - lincRNA NOVEL OTTHUMG00000002332.1 1634 802 3 ENSG00000215910.6 C1orf167 chr1 11761787 11789585 + protein_coding KNOWN OTTHUMG00000002228.2 27799 6499 69 ENSG00000010165.18 METTL13 chr1 171781664 171814023 + protein_coding KNOWN OTTHUMG00000034912.6 32360 3827 36 ENSG00000134882.14 UBAC2 chr13 99200774 99386434 + protein_coding KNOWN OTTHUMG00000017267.3 185661 4603 65 ENSG00000201793.1 RN7SKP9 chr13 99205708 99206006 + misc_RNA KNOWN NA 299 299 1 ENSG00000218502.3 H2AFZP3 chr13 99215372 99215758 - processed_pseudogene KNOWN OTTHUMG00000017262.1 387 387 1 ENSG00000125245.11 GPR18 chr13 99254714 99261744 - protein_coding KNOWN OTTHUMG00000017266.1 7031 1908 11 ENSG00000169508.6 GPR183 chr13 99294530 99307405 - protein_coding KNOWN OTTHUMG00000017263.2 12876 1700 2 ENSG00000207719.1 MIR623 chr13 99356131 99356228 + miRNA KNOWN NA 98 98 1 ENSG00000228808.1 HMGB3P4 chr13 99372173 99372686 + processed_pseudogene KNOWN OTTHUMG00000017268.1 514 514 1 ENSG00000238241.1 CCR12P chr13 99407781 99409062 - processed_pseudogene KNOWN OTTHUMG00000017269.1 1282 998 2 ENSG00000266207.1 AL583784.1 chr13 99453396 99453469 - miRNA NOVEL NA 74 74 1 ENSG00000280734.1 LINC01232 chr13 99486962 99499306 - processed_transcript KNOWN OTTHUMG00000189525.1 12345 6199 15 ENSG00000213060.4 RP4-612B18.3 chr1 171803517 171803939 + processed_pseudogene KNOWN OTTHUMG00000035054.2 423 423 1 ENSG00000280710.1 RP11-214F16.8 chr13 99498524 99501315 + lincRNA NOVEL OTTHUMG00000189526.1 2792 707 6 ENSG00000203441.2 LINC00449 chr13 99499727 99501052 - antisense NOVEL OTTHUMG00000017270.1 1326 872 2 ENSG00000125304.8 TM9SF2 chr13 99501417 99564006 + protein_coding KNOWN OTTHUMG00000017272.3 62590 3885 26 ENSG00000234168.2 LINC01039 chr13 99577112 99580368 + lincRNA NOVEL OTTHUMG00000017273.2 3257 650 3 ENSG00000234239.1 CFL1P8 chr13 99582706 99583180 + processed_pseudogene KNOWN OTTHUMG00000017274.1 475 475 1 ENSG00000125246.14 CLYBL chr13 99606669 99897134 + protein_coding KNOWN OTTHUMG00000017278.3 290466 7227 36 ENSG00000263615.1 MIR4306 chr13 99643059 99643149 + miRNA KNOWN NA 91 91 1 ENSG00000227659.1 CLYBL-AS2 chr13 99690081 99690971 - antisense NOVEL OTTHUMG00000017275.1 891 695 2 ENSG00000234303.2 CLYBL-AS1 chr13 99726247 99727491 - antisense NOVEL OTTHUMG00000017276.2 1245 621 2 ENSG00000201245.1 SNORA25 chr13 99783857 99783983 - snoRNA NOVEL NA 127 127 1 ENSG00000224600.5 RP4-612B18.1 chr1 171824610 171824959 - processed_pseudogene KNOWN OTTHUMG00000034911.1 350 350 1 ENSG00000139800.8 ZIC5 chr13 99962964 99971909 - protein_coding KNOWN OTTHUMG00000017280.3 8946 4639 2 ENSG00000043355.9 ZIC2 chr13 99981772 99986773 + protein_coding KNOWN OTTHUMG00000017279.3 5002 3310 18 ENSG00000260738.1 LINC00554 chr13 99994899 99997909 - antisense NOVEL OTTHUMG00000176067.1 3011 3011 1 ENSG00000225999.1 NDUFA12P1 chr13 100027769 100028174 - processed_pseudogene KNOWN OTTHUMG00000017281.1 406 406 1 ENSG00000280533.1 Metazoa_SRP chr13 100037592 100037850 + misc_RNA NOVEL NA 259 259 1 ENSG00000236554.1 ASNSP3 chr13 100062296 100063601 - processed_pseudogene KNOWN OTTHUMG00000017282.1 1306 1306 1 ENSG00000274605.1 RP11-12G12.7 chr13 100086031 100088848 - lincRNA NOVEL OTTHUMG00000187284.1 2818 913 2 ENSG00000175198.13 PCCA chr13 100089015 100530435 + protein_coding KNOWN OTTHUMG00000017284.9 441421 6171 99 ENSG00000228501.2 RPL15P18 chr13 100150481 100151092 - processed_pseudogene KNOWN OTTHUMG00000017283.2 612 612 1 ENSG00000270632.1 RP11-340C20.3 chr13 100198187 100198469 - processed_pseudogene KNOWN OTTHUMG00000184736.1 283 283 1 ENSG00000197959.12 DNM3 chr1 171841498 172418466 + protein_coding KNOWN OTTHUMG00000034913.4 576969 11329 113 ENSG00000234650.4 PCCA-AS1 chr13 100464440 100481157 - antisense NOVEL OTTHUMG00000017286.1 16718 843 11 ENSG00000134864.9 GGACT chr13 100530164 100589528 - protein_coding KNOWN OTTHUMG00000017291.4 59365 3477 16 ENSG00000224356.4 RP11-151A6.4 chr13 100535741 100587146 - sense_intronic NOVEL OTTHUMG00000017288.4 51406 3635 9 ENSG00000280169.1 RP11-151A6.6 chr13 100537365 100539567 + antisense NOVEL OTTHUMG00000182528.1 2203 2203 1 ENSG00000234354.3 RPS26P47 chr13 100539901 100540248 - processed_pseudogene KNOWN OTTHUMG00000017285.2 348 348 1 ENSG00000125247.14 TMTC4 chr13 100603927 100675093 - protein_coding KNOWN OTTHUMG00000017289.5 71167 6272 90 ENSG00000237082.1 COX5BP6 chr13 100623875 100624429 - processed_pseudogene KNOWN OTTHUMG00000017290.1 555 211 2 ENSG00000233009.1 NALCN-AS1 chr13 100708325 101059286 + antisense KNOWN OTTHUMG00000017294.1 350962 2846 8 ENSG00000214051.3 ARF4P3 chr13 100756551 100757059 - processed_pseudogene KNOWN OTTHUMG00000017292.1 509 509 1 ENSG00000229599.1 LINC00411 chr13 100940862 100944364 - lincRNA KNOWN OTTHUMG00000017293.1 3503 461 2 ENSG00000233540.1 DNM3-IT1 chr1 171864187 171864687 + sense_intronic NOVEL OTTHUMG00000046154.1 501 396 2 ENSG00000102452.14 NALCN chr13 101053776 101416492 - protein_coding KNOWN OTTHUMG00000017295.4 362717 8951 86 ENSG00000198542.12 ITGBL1 chr13 101452593 101720856 + protein_coding KNOWN OTTHUMG00000017296.5 268264 6174 63 ENSG00000102466.14 FGF14 chr13 101710804 102402457 - protein_coding KNOWN OTTHUMG00000017303.8 691654 13759 14 ENSG00000276012.1 RP11-397O8.7 chr13 101717564 101723106 + antisense NOVEL OTTHUMG00000188138.1 5543 429 3 ENSG00000201155.1 RNU1-24P chr13 101778884 101779048 - snRNA KNOWN NA 165 165 1 ENSG00000215399.2 HMGB3P7 chr13 101801878 101802488 + processed_pseudogene KNOWN OTTHUMG00000017297.1 611 611 1 ENSG00000265164.1 MIR2681 chr13 101967642 101967746 - miRNA KNOWN NA 105 105 1 ENSG00000229975.1 LIPT1P1 chr13 102002125 102003310 + processed_pseudogene KNOWN OTTHUMG00000017299.1 1186 1186 1 ENSG00000201690.1 RNY1P2 chr13 102016953 102017069 - misc_RNA KNOWN NA 117 117 1 ENSG00000264482.1 MIR4705 chr13 102045934 102046004 - miRNA KNOWN NA 71 71 1 ENSG00000230630.2 DNM3OS chr1 172136531 172144794 - antisense KNOWN OTTHUMG00000040855.3 8264 4358 4 ENSG00000236860.1 RPL39P29 chr13 102263046 102263202 - processed_pseudogene KNOWN OTTHUMG00000017300.1 157 157 1 ENSG00000243319.6 FGF14-IT1 chr13 102292327 102394519 - sense_intronic NOVEL OTTHUMG00000017301.3 102193 2379 8 ENSG00000279702.1 RP11-347N5.3 chr13 102299790 102300272 - TEC KNOWN OTTHUMG00000185722.1 483 483 1 ENSG00000234445.1 FGF14-AS1 chr13 102367539 102373666 + antisense NOVEL OTTHUMG00000017302.1 6128 537 4 ENSG00000272143.1 FGF14-AS2 chr13 102394630 102395703 + lincRNA NOVEL OTTHUMG00000185723.1 1074 1074 1 ENSG00000261057.1 LINC00555 chr13 102589372 102589813 - antisense NOVEL OTTHUMG00000176068.1 442 442 1 ENSG00000276957.1 RP11-29B2.6 chr13 102593338 102593873 - lincRNA NOVEL OTTHUMG00000187286.1 536 536 1 ENSG00000134900.10 TPP2 chr13 102597003 102679958 + protein_coding KNOWN OTTHUMG00000017305.4 82956 6752 83 ENSG00000139780.7 METTL21C chr13 102685744 102694504 - protein_coding KNOWN OTTHUMG00000017304.2 8761 1088 4 ENSG00000175820.3 CCDC168 chr13 102729369 102759070 - protein_coding KNOWN OTTHUMG00000187287.1 29702 21466 4 ENSG00000207949.1 MIR214 chr1 172138798 172138907 - miRNA KNOWN NA 110 110 1 ENSG00000231633.1 LINC00283 chr13 102742990 102745224 + antisense NOVEL OTTHUMG00000017311.1 2235 1947 2 ENSG00000151287.15 TEX30 chr13 102765990 102773811 - protein_coding KNOWN OTTHUMG00000017306.5 7822 2154 33 ENSG00000134901.11 KDELC1 chr13 102784281 102799007 - protein_coding KNOWN OTTHUMG00000017307.3 14727 2367 26 ENSG00000134897.12 BIVM chr13 102799049 102841535 + protein_coding KNOWN OTTHUMG00000017309.3 42487 5461 34 ENSG00000270181.1 BIVM-ERCC5 chr13 102807354 102872398 + protein_coding KNOWN OTTHUMG00000184166.1 65045 4155 21 ENSG00000134899.16 ERCC5 chr13 102844844 102876001 + protein_coding KNOWN OTTHUMG00000017310.5 31158 6670 57 ENSG00000250878.3 METTL21EP chr13 102880099 102896033 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000017312.3 15935 2337 7 ENSG00000272542.1 RP11-255P5.2 chr13 102888858 102889834 + lincRNA NOVEL OTTHUMG00000185768.1 977 977 1 ENSG00000278445.1 RP11-255P5.3 chr13 102903339 102904000 + lincRNA NOVEL OTTHUMG00000187302.1 662 662 1 ENSG00000125255.6 SLC10A2 chr13 103043998 103066846 - protein_coding KNOWN OTTHUMG00000017313.2 22849 3779 6 ENSG00000208024.1 MIR199A2 chr1 172144535 172144644 - miRNA KNOWN NA 110 110 1 ENSG00000234551.1 LINC01309 chr13 103425200 103427685 + lincRNA NOVEL OTTHUMG00000017314.1 2486 492 2 ENSG00000230474.1 ATP6V1G1P7 chr13 103444620 103444968 - processed_pseudogene KNOWN OTTHUMG00000017315.1 349 349 1 ENSG00000225823.1 RPL7P45 chr13 104814327 104815069 + processed_pseudogene KNOWN OTTHUMG00000017316.1 743 743 1 ENSG00000232307.1 DAOA-AS1 chr13 105459055 105505681 - antisense NOVEL OTTHUMG00000041332.1 46627 2482 7 ENSG00000275968.1 DAOA-AS1_1 chr13 105459815 105460015 + misc_RNA NOVEL NA 201 201 1 ENSG00000275502.1 DAOA-AS1_2 chr13 105462302 105462505 + misc_RNA NOVEL NA 204 204 1 ENSG00000182346.16 DAOA chr13 105465867 105491034 + protein_coding KNOWN OTTHUMG00000041333.9 25168 2295 59 ENSG00000280455.1 RP11-252M24.1 chr13 105690429 105702689 + lincRNA NOVEL OTTHUMG00000189710.1 12261 760 6 ENSG00000226620.6 LINC00343 chr13 105704280 105764440 + processed_transcript NOVEL OTTHUMG00000017317.3 60161 4957 35 ENSG00000252550.1 SNORA25 chr13 105897523 105897643 - snoRNA NOVEL NA 121 121 1 ENSG00000206684.1 RNU6-157P chr1 172366540 172366646 + snRNA KNOWN NA 107 107 1 ENSG00000222643.1 AL603632.1 chr13 106128371 106128488 + miRNA NOVEL NA 118 118 1 ENSG00000222682.1 RNA5SP38 chr13 106155372 106155490 - rRNA KNOWN NA 119 119 1 ENSG00000233532.4 LINC00460 chr13 106376563 106378217 + lincRNA NOVEL OTTHUMG00000017319.1 1655 1152 8 ENSG00000174418.7 RPL35P9 chr13 106425773 106426122 + processed_pseudogene KNOWN OTTHUMG00000017320.1 350 350 1 ENSG00000125266.6 EFNB2 chr13 106489731 106535114 - protein_coding KNOWN OTTHUMG00000017324.5 45384 4461 5 ENSG00000274204.1 RP11-272L14.2 chr13 106506046 106506713 - sense_intronic NOVEL OTTHUMG00000187299.1 668 668 1 ENSG00000134884.12 ARGLU1 chr13 106541673 106568164 - protein_coding KNOWN OTTHUMG00000017321.1 26492 4074 15 ENSG00000278371.2 AL442127.1 chr13 106567662 106567799 + miRNA NOVEL NA 138 138 1 ENSG00000272274.1 LINC00551 chr13 106617810 106631359 + lincRNA NOVEL OTTHUMG00000185758.1 13550 1668 4 ENSG00000230156.2 LINC00443 chr13 106653916 106672163 + lincRNA KNOWN OTTHUMG00000017323.2 18248 1170 3 ENSG00000135845.8 PIGC chr1 172370189 172444086 - protein_coding KNOWN OTTHUMG00000034751.2 73898 5225 22 ENSG00000227590.2 ATP5G1P5 chr13 106663437 106663847 + processed_pseudogene KNOWN OTTHUMG00000017322.1 411 411 1 ENSG00000278698.1 RP11-282A11.3 chr13 106773623 106774279 - lincRNA NOVEL OTTHUMG00000187283.1 657 657 1 ENSG00000174408.8 PPIAP24 chr13 106863816 106864286 - processed_pseudogene KNOWN OTTHUMG00000017325.2 471 471 1 ENSG00000277863.1 RP11-282A11.4 chr13 106903150 106904099 - lincRNA NOVEL OTTHUMG00000187291.1 950 950 1 ENSG00000279157.1 RP11-282A11.2 chr13 106941950 106942561 - TEC KNOWN OTTHUMG00000186838.1 612 612 1 ENSG00000239050.1 AL354741.1 chr13 106974938 106975026 - miRNA NOVEL NA 89 89 1 ENSG00000221316.1 AL445204.1 chr13 107121033 107121123 + miRNA NOVEL NA 91 91 1 ENSG00000204442.3 FAM155A chr13 107163510 107866735 - protein_coding KNOWN OTTHUMG00000017326.3 703226 8503 3 ENSG00000201847.1 SNORD31 chr13 107320895 107320963 - snoRNA NOVEL NA 69 69 1 ENSG00000276740.1 RP11-381O6.1 chr13 107465984 107466674 - sense_intronic NOVEL OTTHUMG00000187292.1 691 691 1 ENSG00000177553.6 RP11-56N19.5 chr1 11777077 11779619 - antisense NOVEL OTTHUMG00000037775.1 2543 1868 3 ENSG00000180999.9 C1orf105 chr1 172420688 172468831 + protein_coding KNOWN OTTHUMG00000034750.4 48144 1725 26 ENSG00000221650.1 MIR1267 chr13 107531171 107531248 - miRNA KNOWN NA 78 78 1 ENSG00000221473.2 AL138710.1 chr13 107636031 107636116 + miRNA NOVEL NA 86 86 1 ENSG00000227248.1 FAM155A-IT1 chr13 107788342 107835451 - sense_intronic NOVEL OTTHUMG00000017327.1 47110 819 2 ENSG00000274718.1 RP11-346C4.3 chr13 107870383 107873372 + lincRNA NOVEL OTTHUMG00000187297.2 2990 2990 1 ENSG00000174405.12 LIG4 chr13 108207439 108218368 - protein_coding KNOWN OTTHUMG00000017328.5 10930 4387 13 ENSG00000139826.5 ABHD13 chr13 108218379 108234255 + protein_coding KNOWN OTTHUMG00000017330.1 15877 5338 2 ENSG00000102524.10 TNFSF13B chr13 108251240 108308484 + protein_coding KNOWN OTTHUMG00000017329.3 57245 3059 24 ENSG00000277246.1 RP11-153I24.4 chr13 108267320 108267734 + sense_intronic NOVEL OTTHUMG00000187298.1 415 415 1 ENSG00000223177.1 RNA5SP39 chr13 108301212 108301331 - rRNA KNOWN NA 120 120 1 ENSG00000232087.1 HCFC2P1 chr13 108480226 108481817 + processed_pseudogene KNOWN OTTHUMG00000017331.1 1592 1592 1 ENSG00000094975.12 SUCO chr1 172532349 172611833 + protein_coding KNOWN OTTHUMG00000034839.4 79485 7894 130 ENSG00000041515.14 MYO16 chr13 108596152 109208007 + protein_coding KNOWN OTTHUMG00000017333.4 611856 9209 157 ENSG00000229938.1 MYO16-AS2 chr13 109101261 109101919 - antisense NOVEL OTTHUMG00000017332.1 659 436 2 ENSG00000236242.1 MYO16-AS1 chr13 109163902 109201483 - antisense NOVEL OTTHUMG00000017335.1 37582 580 4 ENSG00000275216.1 RP11-54H7.4 chr13 109269634 109273838 + lincRNA NOVEL OTTHUMG00000187241.1 4205 4205 1 ENSG00000223617.1 LINC00370 chr13 109281973 109287733 + lincRNA NOVEL OTTHUMG00000017334.1 5761 698 2 ENSG00000236053.1 LINC01067 chr13 109310135 109311773 + lincRNA NOVEL OTTHUMG00000017336.1 1639 664 2 ENSG00000229792.1 LINC00399 chr13 109400696 109401641 + lincRNA NOVEL OTTHUMG00000017337.1 946 414 2 ENSG00000234854.1 LINC00676 chr13 109728282 109730007 + antisense NOVEL OTTHUMG00000017340.1 1726 474 3 ENSG00000185950.8 IRS2 chr13 109752698 109786568 - protein_coding KNOWN OTTHUMG00000017338.2 33871 8138 2 ENSG00000275741.1 RP11-40E6.1 chr13 109785831 109808252 + antisense NOVEL OTTHUMG00000187250.1 22422 518 3 ENSG00000251943.1 RNU6-693P chr1 172613428 172613534 - snRNA KNOWN NA 107 107 1 ENSG00000275248.1 RP11-40E6.2 chr13 109805317 109805868 + lincRNA NOVEL OTTHUMG00000187251.1 552 552 1 ENSG00000201161.1 RN7SKP10 chr13 109915096 109915420 + misc_RNA KNOWN NA 325 325 1 ENSG00000274331.1 RP11-403A3.1 chr13 109984858 109986565 - lincRNA NOVEL OTTHUMG00000187260.1 1708 1708 1 ENSG00000275830.1 RP11-403A3.3 chr13 109988097 110057331 - lincRNA NOVEL OTTHUMG00000187265.1 69235 1331 5 ENSG00000276269.1 RP11-403A3.2 chr13 110031101 110031567 - lincRNA NOVEL OTTHUMG00000187262.1 467 467 1 ENSG00000231428.2 LINC00396 chr13 110053285 110054952 + lincRNA NOVEL OTTHUMG00000017341.2 1668 439 4 ENSG00000265885.2 RN7SL783P chr13 110097851 110098151 - misc_RNA KNOWN NA 301 301 1 ENSG00000279965.1 RP11-472K17.3 chr13 110123208 110125234 + TEC KNOWN OTTHUMG00000176070.1 2027 2027 1 ENSG00000187498.13 COL4A1 chr13 110148963 110307149 - protein_coding KNOWN OTTHUMG00000017342.7 158187 8188 97 ENSG00000279237.1 RP11-212E4.1 chr13 110265251 110266113 - TEC KNOWN OTTHUMG00000188248.1 863 863 1 ENSG00000117560.7 FASLG chr1 172659018 172666874 + protein_coding KNOWN OTTHUMG00000034841.1 7857 1888 7 ENSG00000134871.16 COL4A2 chr13 110305812 110513027 + protein_coding KNOWN OTTHUMG00000017344.4 207216 8706 75 ENSG00000276765.1 MIR8073 chr13 110340958 110341029 + miRNA KNOWN NA 72 72 1 ENSG00000275611.1 RP11-291I6.2 chr13 110429026 110429342 + sense_intronic NOVEL OTTHUMG00000187267.1 317 317 1 ENSG00000224821.5 COL4A2-AS2 chr13 110456396 110463287 - antisense KNOWN OTTHUMG00000149650.2 6892 1522 5 ENSG00000232814.2 COL4A2-AS1 chr13 110502575 110508179 - antisense NOVEL OTTHUMG00000149649.2 5605 540 3 ENSG00000139832.4 RAB20 chr13 110523066 110561733 - protein_coding KNOWN OTTHUMG00000017343.3 38668 1518 2 ENSG00000275880.1 RP11-90L1.8 chr13 110613082 110616353 - antisense NOVEL OTTHUMG00000187271.1 3272 3272 1 ENSG00000213995.10 CARKD chr13 110615460 110639993 + protein_coding KNOWN OTTHUMG00000017345.3 24534 2847 26 ENSG00000134905.15 CARS2 chr13 110641412 110713603 - protein_coding KNOWN OTTHUMG00000017347.6 72192 10460 181 ENSG00000153487.12 ING1 chr13 110712736 110723339 + protein_coding KNOWN OTTHUMG00000017346.5 10604 6388 10 ENSG00000229785.1 SLC25A38P1 chr1 172748560 172749502 + processed_pseudogene KNOWN OTTHUMG00000034836.1 943 943 1 ENSG00000225239.1 RPL21P107 chr13 110762674 110763133 - processed_pseudogene KNOWN OTTHUMG00000017348.1 460 460 1 ENSG00000259831.1 LINC00567 chr13 110809676 110813084 - lincRNA KNOWN OTTHUMG00000176071.1 3409 3409 1 ENSG00000255874.2 LINC00346 chr13 110863987 110870251 - lincRNA KNOWN OTTHUMG00000187398.1 6265 6265 1 ENSG00000088448.13 ANKRD10 chr13 110878540 110915069 - protein_coding KNOWN OTTHUMG00000017349.6 36530 4563 43 ENSG00000229152.2 ANKRD10-IT1 chr13 110894639 110899172 - sense_intronic NOVEL OTTHUMG00000046190.2 4534 800 2 ENSG00000277767.1 RP11-365P13.5 chr13 110916004 110917827 + lincRNA NOVEL OTTHUMG00000187282.1 1824 1824 1 ENSG00000227105.1 PARP1P1 chr13 110936759 110939784 + processed_pseudogene KNOWN OTTHUMG00000017350.1 3026 3026 1 ENSG00000275989.1 RP11-365P13.6 chr13 110952722 110952811 - unprocessed_pseudogene KNOWN OTTHUMG00000187816.1 90 90 1 ENSG00000225760.1 LINC00431 chr13 110983307 110990564 + lincRNA NOVEL OTTHUMG00000017351.1 7258 684 2 ENSG00000225870.1 LINC00368 chr13 111095838 111103097 + lincRNA NOVEL OTTHUMG00000017352.1 7260 650 3 ENSG00000279061.1 RP3-332O11.2 chr1 172752586 172752924 + TEC KNOWN OTTHUMG00000176126.1 339 339 1 ENSG00000235875.3 ARHGEF7-AS2 chr13 111113812 111115678 - antisense NOVEL OTTHUMG00000017353.2 1867 1239 2 ENSG00000102606.16 ARHGEF7 chr13 111114559 111305737 + protein_coding KNOWN OTTHUMG00000017357.8 191179 11768 213 ENSG00000233644.1 ARHGEF7-IT1 chr13 111122652 111144264 + sense_intronic NOVEL OTTHUMG00000017354.1 21613 804 2 ENSG00000227352.1 ARHGEF7-AS1 chr13 111144305 111144733 - antisense NOVEL OTTHUMG00000017355.1 429 321 2 ENSG00000274614.1 RP11-17E4.1 chr13 111182111 111182692 - unprocessed_pseudogene KNOWN OTTHUMG00000187818.1 582 582 1 ENSG00000153495.9 TEX29 chr13 111316184 111344249 + protein_coding KNOWN OTTHUMG00000017358.3 28066 930 13 ENSG00000204398.5 RP11-65D24.2 chr13 111588201 111672608 + lincRNA NOVEL OTTHUMG00000017360.3 84408 2130 5 ENSG00000215881.3 RP11-65D24.1 chr13 111596009 111642079 + lincRNA NOVEL OTTHUMG00000017359.2 46071 374 2 ENSG00000226903.1 LINC00354 chr13 111899985 111901176 + lincRNA NOVEL OTTHUMG00000017361.1 1192 590 4 ENSG00000200072.1 SNORD44 chr13 112052078 112052138 + snoRNA NOVEL NA 61 61 1 ENSG00000224228.2 RP1-15D23.2 chr1 172775905 173064015 + lincRNA NOVEL OTTHUMG00000040853.2 288111 808 5 ENSG00000182968.4 SOX1 chr13 112067647 112070488 + protein_coding KNOWN OTTHUMG00000017362.3 2842 2842 1 ENSG00000260385.1 RP11-450H6.3 chr13 112083549 112085471 + lincRNA NOVEL OTTHUMG00000176075.1 1923 1923 1 ENSG00000229520.1 LINC00404 chr13 112106095 112106882 - lincRNA NOVEL OTTHUMG00000017364.1 788 428 2 ENSG00000224243.1 LINC00403 chr13 112107119 112108015 + lincRNA NOVEL OTTHUMG00000017363.1 897 545 2 ENSG00000260102.1 LINC01070 chr13 112197350 112201000 + lincRNA NOVEL OTTHUMG00000176078.1 3651 2829 2 ENSG00000260343.1 LINC01043 chr13 112313467 112321758 + lincRNA NOVEL OTTHUMG00000176083.1 8292 6897 2 ENSG00000223626.1 LINC01044 chr13 112322567 112331225 - lincRNA NOVEL OTTHUMG00000017366.1 8659 657 3 ENSG00000153498.10 SPACA7 chr13 112376319 112434689 + protein_coding KNOWN OTTHUMG00000017365.3 58371 1114 25 ENSG00000126216.11 TUBGCP3 chr13 112485005 112588167 - protein_coding KNOWN OTTHUMG00000017367.5 103163 7014 80 ENSG00000277159.1 RP11-88E10.4 chr13 112602828 112606417 - lincRNA NOVEL OTTHUMG00000187183.1 3590 3590 1 ENSG00000227177.1 AIMP1P2 chr1 172885947 172886258 - processed_pseudogene KNOWN OTTHUMG00000034833.1 312 312 1 ENSG00000197595.3 ATP11AUN chr13 112647044 112684497 + protein_coding KNOWN OTTHUMG00000056478.2 37454 2241 6 ENSG00000274922.1 RP11-88E10.5 chr13 112686769 112689815 - lincRNA NOVEL OTTHUMG00000187192.1 3047 3047 1 ENSG00000068650.17 ATP11A chr13 112690329 112887168 + protein_coding KNOWN OTTHUMG00000017371.10 196840 13733 175 ENSG00000264726.1 AL162711.1 chr13 112717845 112717914 - miRNA NOVEL NA 70 70 1 ENSG00000232684.1 ATP11A-AS1 chr13 112745449 112754693 - antisense NOVEL OTTHUMG00000017370.2 9245 2192 2 ENSG00000277545.1 RP11-73M11.3 chr13 112811566 112812158 + sense_intronic NOVEL OTTHUMG00000187196.1 593 593 1 ENSG00000126217.19 MCF2L chr13 112894378 113099739 + protein_coding KNOWN OTTHUMG00000017377.16 205362 23148 301 ENSG00000267868.1 RP11-120K24.3 chr13 112964835 112966131 - lincRNA NOVEL OTTHUMG00000182533.1 1297 1297 1 ENSG00000235280.2 MCF2L-AS1 chr13 112967484 112968824 - antisense NOVEL OTTHUMG00000057130.2 1341 712 2 ENSG00000269356.1 RP11-120K24.4 chr13 113008778 113009424 + sense_intronic NOVEL OTTHUMG00000182534.1 647 647 1 ENSG00000224000.1 RP3-471M13.2 chr1 172906900 172907684 + lincRNA NOVEL OTTHUMG00000034834.1 785 658 2 ENSG00000269376.1 RP11-120K24.5 chr13 113009671 113010319 + sense_intronic NOVEL OTTHUMG00000182535.1 649 649 1 ENSG00000057593.12 F7 chr13 113105788 113120681 + protein_coding KNOWN OTTHUMG00000017373.7 14894 3795 36 ENSG00000126218.10 F10 chr13 113122814 113149529 + protein_coding KNOWN OTTHUMG00000017374.7 26716 2356 43 ENSG00000231882.1 F10-AS1 chr13 113128155 113128880 - antisense NOVEL OTTHUMG00000133691.1 726 417 2 ENSG00000230371.1 KARSP2 chr13 113130416 113132054 + processed_pseudogene KNOWN OTTHUMG00000017375.2 1639 1639 1 ENSG00000126231.12 PROZ chr13 113158654 113172383 + protein_coding KNOWN OTTHUMG00000017376.2 13730 1666 22 ENSG00000269125.1 RP11-98F14.11 chr13 113165002 113165183 - antisense NOVEL OTTHUMG00000182536.1 182 182 1 ENSG00000126226.20 PCID2 chr13 113177539 113208715 - protein_coding KNOWN OTTHUMG00000017385.4 31177 6243 164 ENSG00000139842.13 CUL4A chr13 113208193 113267108 + protein_coding KNOWN OTTHUMG00000017384.4 58916 7869 136 ENSG00000278639.1 AL136221.3 chr13 113262834 113262913 + miRNA NOVEL NA 80 80 1 ENSG00000120337.8 TNFSF18 chr1 173039960 173050963 - protein_coding KNOWN OTTHUMG00000034835.2 11004 2008 3 ENSG00000277942.1 MIR8075 chr13 113262920 113262999 + miRNA KNOWN NA 80 80 1 ENSG00000275403.1 AL136221.2 chr13 113263006 113263085 + miRNA NOVEL NA 80 80 1 ENSG00000275261.1 AL136221.1 chr13 113263092 113263171 + miRNA NOVEL NA 80 80 1 ENSG00000232662.2 LDHBP1 chr13 113276616 113277734 + processed_pseudogene KNOWN OTTHUMG00000017383.2 1119 1119 1 ENSG00000185896.10 LAMP1 chr13 113297241 113323672 + protein_coding KNOWN OTTHUMG00000017380.2 26432 5739 17 ENSG00000139835.12 GRTP1 chr13 113324164 113364148 - protein_coding KNOWN OTTHUMG00000017381.5 39985 2916 29 ENSG00000276434.1 RP11-391H12.8 chr13 113339450 113339958 - sense_intronic NOVEL OTTHUMG00000187208.1 509 509 1 ENSG00000225083.1 GRTP1-AS1 chr13 113351673 113361868 + antisense NOVEL OTTHUMG00000017382.1 10196 1177 4 ENSG00000278309.1 RP11-102K13.5 chr13 113399610 113405572 - lincRNA NOVEL OTTHUMG00000187219.1 5963 5963 1 ENSG00000153531.11 ADPRHL1 chr13 113421940 113453524 - protein_coding KNOWN OTTHUMG00000017386.6 31585 2313 19 ENSG00000177000.9 MTHFR chr1 11785723 11806920 - protein_coding KNOWN OTTHUMG00000002277.1 21198 10214 60 ENSG00000230849.2 GOT2P2 chr1 173141100 173142350 - processed_pseudogene KNOWN OTTHUMG00000034837.1 1251 1251 1 ENSG00000150401.13 DCUN1D2 chr13 113455819 113490952 - protein_coding KNOWN OTTHUMG00000017390.4 35134 4346 46 ENSG00000233613.4 DCUN1D2-AS chr13 113468901 113476135 + antisense NOVEL OTTHUMG00000017391.1 7235 373 4 ENSG00000202347.1 RNU1-16P chr13 113478915 113479078 - snRNA KNOWN NA 164 164 1 ENSG00000150403.16 TMCO3 chr13 113490995 113554590 + protein_coding KNOWN OTTHUMG00000017389.9 63596 10407 57 ENSG00000276916.1 RP11-230F18.6 chr13 113511747 113514473 + sense_intronic NOVEL OTTHUMG00000187505.1 2727 418 2 ENSG00000276248.1 RP11-230F18.5 chr13 113527260 113530621 + sense_intronic NOVEL OTTHUMG00000187227.1 3362 3362 1 ENSG00000198176.11 TFDP1 chr13 113584721 113641470 + protein_coding KNOWN OTTHUMG00000017388.5 56750 3741 58 ENSG00000186009.4 ATP4B chr13 113648804 113658186 - protein_coding KNOWN OTTHUMG00000140234.3 9383 1488 7 ENSG00000185974.6 GRK1 chr13 113667155 113737735 + protein_coding KNOWN OTTHUMG00000185528.1 70581 4941 12 ENSG00000279770.1 LINC00552 chr13 113748511 113751089 - TEC KNOWN OTTHUMG00000186842.1 2579 2579 1 ENSG00000226375.1 RP3-395P12.2 chr1 173174300 173175503 - lincRNA NOVEL OTTHUMG00000034840.1 1204 690 2 ENSG00000184497.11 TMEM255B chr13 113759240 113816995 + protein_coding KNOWN OTTHUMG00000017398.6 57756 7287 30 ENSG00000233695.2 GAS6-AS1 chr13 113815630 113845744 + antisense KNOWN OTTHUMG00000017396.2 30115 7169 6 ENSG00000183087.13 GAS6 chr13 113820549 113864067 - protein_coding KNOWN OTTHUMG00000017395.4 43519 6006 36 ENSG00000272695.1 GAS6-AS2 chr13 113864168 113866833 + lincRNA KNOWN OTTHUMG00000186446.1 2666 1952 2 ENSG00000237699.1 RP11-199F6.4 chr13 113877608 113879376 + lincRNA NOVEL OTTHUMG00000017397.1 1769 344 2 ENSG00000226921.5 LINC00454 chr13 113878489 113883651 - lincRNA NOVEL OTTHUMG00000017392.3 5163 2234 21 ENSG00000274766.1 LINC00453 chr13 113883667 113885335 + lincRNA NOVEL OTTHUMG00000186657.1 1669 525 2 ENSG00000229373.7 LINC00452 chr13 113888306 113923512 + lincRNA NOVEL OTTHUMG00000017394.2 35207 3578 16 ENSG00000260910.1 LINC00565 chr13 113926514 113928844 - lincRNA NOVEL OTTHUMG00000176086.1 2331 2331 1 ENSG00000185989.10 RASA3 chr13 113977783 114132611 - protein_coding KNOWN OTTHUMG00000017399.3 154829 4763 30 ENSG00000117586.9 TNFSF4 chr1 173183734 173207313 - protein_coding KNOWN OTTHUMG00000034838.2 23580 3942 8 ENSG00000232487.1 RASA3-IT1 chr13 114107569 114108820 - sense_intronic KNOWN OTTHUMG00000017400.1 1252 380 2 ENSG00000130177.13 CDC16 chr13 114234887 114272723 + protein_coding KNOWN OTTHUMG00000017402.4 37837 3901 148 ENSG00000264539.1 MIR548AR chr13 114244505 114244561 + miRNA KNOWN NA 57 57 1 ENSG00000265450.1 MIR4502 chr13 114273828 114273908 + miRNA KNOWN NA 81 81 1 ENSG00000169062.13 UPF3A chr13 114281584 114305817 + protein_coding KNOWN OTTHUMG00000017403.5 24234 5772 67 ENSG00000226158.1 CLCP2 chr13 114306646 114307066 + processed_pseudogene KNOWN OTTHUMG00000017401.1 421 421 1 ENSG00000198824.5 CHAMP1 chr13 114314513 114327328 + protein_coding KNOWN OTTHUMG00000017404.5 12816 4171 7 ENSG00000229723.1 LINC01054 chr13 114329559 114333948 - antisense NOVEL OTTHUMG00000017405.1 4390 514 3 ENSG00000260615.1 WI2-1528O10.1 chr13 114346167 114346637 + processed_pseudogene KNOWN OTTHUMG00000175625.1 471 471 1 ENSG00000215398.10 RP11-754I20.1 chr14 18333726 18341859 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000163209.3 8134 734 8 ENSG00000232751.1 RP11-296O14.1 chr1 173351689 173352004 + processed_pseudogene KNOWN OTTHUMG00000034805.1 316 316 1 ENSG00000206906.1 RNU6-458P chr14 18343038 18343144 + snRNA KNOWN NA 107 107 1 ENSG00000257171.2 RP11-754I20.3 chr14 18395626 18412264 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000170292.2 16639 1525 3 ENSG00000257356.2 BNIP3P6 chr14 18418775 18419273 + processed_pseudogene KNOWN OTTHUMG00000170293.2 499 499 1 ENSG00000238442.1 CR383657.1 chr14 18477371 18477453 + miRNA NOVEL NA 83 83 1 ENSG00000257959.1 RP11-536C10.4 chr14 18555677 18596310 - antisense NOVEL OTTHUMG00000170294.1 40634 498 2 ENSG00000257721.1 RP11-536C10.2 chr14 18560047 18560191 + processed_pseudogene KNOWN OTTHUMG00000170295.1 145 145 1 ENSG00000258367.2 RP11-536C10.3 chr14 18562928 18568790 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000170296.1 5863 406 4 ENSG00000257825.1 RP11-536C10.5 chr14 18588274 18588315 - transcribed_processed_pseudogene KNOWN OTTHUMG00000170297.1 42 42 1 ENSG00000257115.1 OR11H12 chr14 18601045 18602129 + protein_coding KNOWN OTTHUMG00000170298.1 1085 1085 1 ENSG00000257672.2 RP11-536C10.17 chr14 18614388 18614561 + processed_pseudogene KNOWN OTTHUMG00000170333.2 174 174 1 ENSG00000231615.2 RP11-296O14.2 chr1 173362397 173363733 - processed_pseudogene KNOWN OTTHUMG00000034806.2 1337 1337 1 ENSG00000258233.1 ARHGAP42P5 chr14 18623852 18626787 - processed_pseudogene KNOWN OTTHUMG00000170299.1 2936 2936 1 ENSG00000257504.1 RP11-536C10.7 chr14 18630318 18633634 - lincRNA NOVEL OTTHUMG00000170300.1 3317 1493 3 ENSG00000257644.1 RP11-536C10.13 chr14 18631388 18650966 + unprocessed_pseudogene KNOWN OTTHUMG00000170301.1 19579 394 3 ENSG00000257175.2 RP11-536C10.12 chr14 18634955 18637208 - processed_pseudogene KNOWN OTTHUMG00000170302.2 2254 2254 1 ENSG00000258364.1 RP11-536C10.16 chr14 18636043 18637421 + lincRNA NOVEL OTTHUMG00000170334.1 1379 563 2 ENSG00000257731.2 RP11-536C10.11 chr14 18645044 18646221 - processed_pseudogene KNOWN OTTHUMG00000170304.2 1178 1178 1 ENSG00000258076.1 RP11-536C10.14 chr14 18645991 18646503 + processed_pseudogene KNOWN OTTHUMG00000170335.1 513 513 1 ENSG00000257558.2 RP11-536C10.15 chr14 18667249 18667370 + processed_pseudogene KNOWN OTTHUMG00000170336.2 122 122 1 ENSG00000239200.1 RP11-536C10.1 chr14 18692032 18692408 + processed_pseudogene KNOWN OTTHUMG00000157631.2 377 377 1 ENSG00000257635.2 RP11-536C10.10 chr14 18698639 18699978 - transcribed_processed_pseudogene KNOWN OTTHUMG00000170305.2 1340 1340 1 ENSG00000203739.3 RP11-296O14.3 chr1 173417793 173461362 - antisense NOVEL OTTHUMG00000034807.1 43570 2282 5 ENSG00000257224.1 RP11-536C10.9 chr14 18702281 18702463 - transcribed_processed_pseudogene KNOWN OTTHUMG00000170306.1 183 183 1 ENSG00000277529.1 RP11-536C10.25 chr14 18709478 18712643 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000188378.2 3166 751 9 ENSG00000277367.1 RP11-536C10.26 chr14 18889084 18890424 - processed_pseudogene KNOWN OTTHUMG00000188379.1 1341 1341 1 ENSG00000278143.1 NF1P4 chr14 18899942 18909673 - unprocessed_pseudogene KNOWN OTTHUMG00000170303.6 9732 1530 11 ENSG00000257853.2 MED15P1 chr14 18912805 18916642 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000170337.3 3838 1188 12 ENSG00000257891.1 CTD-2311B13.1 chr14 18920109 18934078 + lincRNA NOVEL OTTHUMG00000170338.2 13970 871 6 ENSG00000258265.1 CTD-2311B13.2 chr14 18944199 18945139 + lincRNA NOVEL OTTHUMG00000170339.1 941 381 2 ENSG00000222036.6 POTEG chr14 18967434 18999012 + protein_coding KNOWN OTTHUMG00000170340.4 31579 2231 35 ENSG00000275563.1 CTD-2311B13.5 chr14 18977180 18980742 - antisense NOVEL OTTHUMG00000170341.3 3563 2086 2 ENSG00000212612.1 RNU6-1239P chr14 18978847 18978953 + snRNA KNOWN NA 107 107 1 ENSG00000117592.8 PRDX6 chr1 173477266 173488807 + protein_coding KNOWN OTTHUMG00000034804.1 11542 2367 11 ENSG00000258314.3 CTD-2314B22.1 chr14 19024090 19055551 + lincRNA NOVEL OTTHUMG00000170342.4 31462 796 5 ENSG00000274369.1 RP11-146E13.8 chr14 19026521 19028189 - processed_pseudogene KNOWN OTTHUMG00000188535.1 1669 1115 2 ENSG00000225210.4 DUXAP10 chr14 19062316 19115270 + transcribed_processed_pseudogene KNOWN OTTHUMG00000188246.3 52955 4314 35 ENSG00000277128.1 RP11-146E13.4 chr14 19127736 19175530 - lincRNA NOVEL OTTHUMG00000170505.2 47795 586 2 ENSG00000278594.1 RP11-146E13.5 chr14 19131842 19132890 - processed_pseudogene KNOWN OTTHUMG00000188245.1 1049 1049 1 ENSG00000277710.1 CTD-2314B22.2 chr14 19154134 19155089 + processed_pseudogene KNOWN OTTHUMG00000170506.3 956 233 2 ENSG00000196143.4 OR11H13P chr14 19180291 19181269 + processed_pseudogene KNOWN OTTHUMG00000170504.2 979 979 1 ENSG00000271632.1 RP11-496I2.7 chr14 19199763 19200279 - processed_pseudogene KNOWN OTTHUMG00000185290.1 517 517 1 ENSG00000277252.1 RP11-496I2.8 chr14 19220796 19220912 - unprocessed_pseudogene KNOWN OTTHUMG00000187823.1 117 117 1 ENSG00000258781.2 RP11-496I2.4 chr14 19228924 19244931 - unprocessed_pseudogene KNOWN OTTHUMG00000170502.2 16008 602 2 ENSG00000162753.11 SLC9C2 chr1 173500464 173603094 - protein_coding KNOWN OTTHUMG00000034800.1 102631 4916 55 ENSG00000257310.1 RP11-496I2.2 chr14 19244962 19247673 + lincRNA NOVEL OTTHUMG00000170433.1 2712 2712 1 ENSG00000277156.1 RP11-496I2.5 chr14 19267115 19268164 + processed_pseudogene KNOWN OTTHUMG00000170503.3 1050 1050 1 ENSG00000244306.8 LINC01296 chr14 19284653 19337730 - transcribed_processed_pseudogene KNOWN OTTHUMG00000170430.11 53078 6465 36 ENSG00000279508.1 AL589743.1 chr14 19300177 19302924 - protein_coding KNOWN NA 2748 2748 1 ENSG00000228294.5 BMS1P17 chr14 19301704 19316914 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000150377.3 15211 1130 8 ENSG00000274827.3 LINC01297 chr14 19344578 19384587 - lincRNA NOVEL OTTHUMG00000170514.4 40010 4414 7 ENSG00000278301.1 CTD-2311B13.9 chr14 19371822 19373490 + processed_pseudogene KNOWN OTTHUMG00000188244.1 1669 1669 1 ENSG00000187537.12 POTEM chr14 19402486 19434341 - protein_coding KNOWN OTTHUMG00000170518.8 31856 2509 35 ENSG00000276888.1 RP11-244H18.1 chr14 19420975 19425017 + antisense NOVEL OTTHUMG00000170542.2 4043 2566 2 ENSG00000212516.1 RNU6-1268P chr14 19422815 19422921 - snRNA KNOWN NA 107 107 1 ENSG00000238272.1 RP3-436N22.3 chr1 173555251 173612772 + antisense NOVEL OTTHUMG00000034801.1 57522 677 3 ENSG00000257162.5 MED15P6 chr14 19485336 19489148 + transcribed_processed_pseudogene KNOWN OTTHUMG00000170543.4 3813 988 12 ENSG00000258027.2 NF1P7 chr14 19492281 19501740 + unprocessed_pseudogene KNOWN OTTHUMG00000170544.4 9460 1681 11 ENSG00000273639.3 RP11-597A11.11 chr14 19499737 19677923 + processed_transcript NOVEL OTTHUMG00000188373.2 178187 636 13 ENSG00000274649.1 CTD-2311B13.10 chr14 19511244 19511712 + processed_pseudogene KNOWN OTTHUMG00000188372.1 469 469 1 ENSG00000278184.1 RP11-597A11.10 chr14 19612191 19619490 + unprocessed_pseudogene KNOWN OTTHUMG00000188370.1 7300 1282 8 ENSG00000257432.1 RP11-244H18.4 chr14 19629006 19630340 + processed_pseudogene KNOWN OTTHUMG00000170545.2 1335 1335 1 ENSG00000273558.1 RP11-244H18.3 chr14 19637225 19641306 + lincRNA NOVEL OTTHUMG00000170546.2 4082 1837 3 ENSG00000258324.2 RP11-536C10.22 chr14 19653623 19653742 - processed_pseudogene KNOWN OTTHUMG00000170551.3 120 120 1 ENSG00000257493.1 RP11-536C10.20 chr14 19664098 19683677 - unprocessed_pseudogene KNOWN OTTHUMG00000170552.1 19580 411 3 ENSG00000257751.2 RP11-536C10.21 chr14 19668542 19669056 - processed_pseudogene KNOWN OTTHUMG00000170553.2 515 515 1 ENSG00000183831.6 ANKRD45 chr1 173609561 173669862 - protein_coding KNOWN OTTHUMG00000040546.2 60302 2911 8 ENSG00000257846.2 RP11-597A11.3 chr14 19668829 19670003 + processed_pseudogene KNOWN OTTHUMG00000170554.2 1175 1175 1 ENSG00000259069.1 RP11-597A11.6 chr14 19677644 19679016 - lincRNA NOVEL OTTHUMG00000170596.1 1373 563 2 ENSG00000257884.2 RP11-597A11.4 chr14 19677837 19680104 + transcribed_processed_pseudogene KNOWN OTTHUMG00000170555.2 2268 2268 1 ENSG00000257395.1 RP11-597A11.2 chr14 19681420 19684739 + lincRNA NOVEL OTTHUMG00000170556.1 3320 1493 3 ENSG00000258080.1 ARHGAP42P4 chr14 19688261 19691194 + processed_pseudogene KNOWN OTTHUMG00000170557.1 2934 2934 1 ENSG00000257142.1 RP11-536C10.19 chr14 19700479 19700650 - unprocessed_pseudogene KNOWN OTTHUMG00000170558.1 172 172 1 ENSG00000258453.2 OR11H2 chr14 19712936 19713920 - protein_coding KNOWN OTTHUMG00000170597.2 985 985 1 ENSG00000176294.4 OR4N2 chr14 19719015 19828372 + protein_coding KNOWN OTTHUMG00000170614.4 109358 1499 8 ENSG00000258438.3 OR11K2P chr14 19733355 19734302 - unprocessed_pseudogene KNOWN OTTHUMG00000170598.1 948 948 1 ENSG00000182652.1 OR4Q3 chr14 19747428 19748369 + protein_coding KNOWN OTTHUMG00000170612.2 942 942 1 ENSG00000011021.20 CLCN6 chr1 11806096 11843144 + protein_coding KNOWN OTTHUMG00000002299.4 37049 6938 111 ENSG00000232113.1 RP11-360D2.1 chr1 173635773 173637134 + antisense NOVEL OTTHUMG00000040547.1 1362 381 2 ENSG00000176312.4 OR4H12P chr14 19759868 19760774 + unprocessed_pseudogene KNOWN OTTHUMG00000170613.1 907 907 1 ENSG00000176299.4 OR4M1 chr14 19780242 19781357 + protein_coding KNOWN OTTHUMG00000170599.1 1116 1116 1 ENSG00000258564.1 OR4N1P chr14 19796345 19797260 + unprocessed_pseudogene KNOWN OTTHUMG00000154362.2 916 916 1 ENSG00000228304.1 OR4K6P chr14 19847367 19848263 + unprocessed_pseudogene KNOWN OTTHUMG00000170623.1 897 897 1 ENSG00000176290.7 OR4K3 chr14 19868242 19869143 - unprocessed_pseudogene KNOWN OTTHUMG00000154257.1 902 902 1 ENSG00000165762.2 OR4K2 chr14 19876232 19877309 + protein_coding KNOWN OTTHUMG00000170624.1 1078 1078 1 ENSG00000258541.1 OR4K4P chr14 19905917 19906600 + unprocessed_pseudogene KNOWN OTTHUMG00000170625.1 684 684 1 ENSG00000259016.1 CTD-2335L22.6 chr14 19908096 19908649 - processed_pseudogene KNOWN OTTHUMG00000170626.1 554 554 1 ENSG00000176281.4 OR4K5 chr14 19920582 19921659 + protein_coding KNOWN OTTHUMG00000170627.1 1078 1078 1 ENSG00000155249.4 OR4K1 chr14 19935608 19936683 + protein_coding KNOWN OTTHUMG00000170633.1 1076 1076 1 ENSG00000076321.9 KLHL20 chr1 173714941 173786702 + protein_coding KNOWN OTTHUMG00000040548.1 71762 4254 24 ENSG00000258822.1 OR4K16P chr14 19956600 19957568 + unprocessed_pseudogene KNOWN OTTHUMG00000170634.1 969 969 1 ENSG00000169488.5 OR4K15 chr14 19975444 19976659 + protein_coding KNOWN OTTHUMG00000170635.1 1216 1216 1 ENSG00000196383.5 OR4Q2 chr14 20002163 20003163 + polymorphic_pseudogene KNOWN OTTHUMG00000168643.1 1001 965 4 ENSG00000169484.2 OR4K14 chr14 20014260 20015193 - protein_coding KNOWN OTTHUMG00000170780.1 934 934 1 ENSG00000265199.1 AL359218.1 chr14 20033661 20033764 + miRNA NOVEL NA 104 104 1 ENSG00000176253.2 OR4K13 chr14 20033844 20034760 - protein_coding KNOWN OTTHUMG00000170781.1 917 917 1 ENSG00000258899.1 OR4U1P chr14 20043916 20044827 + unprocessed_pseudogene KNOWN OTTHUMG00000170636.1 912 912 1 ENSG00000176246.1 OR4L1 chr14 20060045 20060983 + protein_coding KNOWN OTTHUMG00000169492.1 939 939 1 ENSG00000252999.1 RNA5SP380 chr14 20090130 20090227 + rRNA KNOWN NA 98 98 1 ENSG00000258641.1 OR4T1P chr14 20093353 20094263 + unprocessed_pseudogene KNOWN OTTHUMG00000170782.1 911 911 1 ENSG00000225591.2 RP11-360D2.2 chr1 173741674 173741928 + processed_pseudogene KNOWN OTTHUMG00000040549.2 255 255 1 ENSG00000176230.4 OR4K17 chr14 20117407 20118438 + protein_coding KNOWN OTTHUMG00000170783.1 1032 1032 1 ENSG00000184394.1 OR4N5 chr14 20143736 20144662 + protein_coding KNOWN OTTHUMG00000170784.1 927 927 1 ENSG00000259074.1 PSMB7P1 chr14 20149232 20149745 + unitary_pseudogene KNOWN OTTHUMG00000170785.1 514 514 1 ENSG00000259095.1 RP11-98N22.6 chr14 20173632 20173813 - processed_pseudogene KNOWN OTTHUMG00000170786.1 182 182 1 ENSG00000258468.1 OR11G1P chr14 20179189 20180156 + unprocessed_pseudogene KNOWN OTTHUMG00000170848.1 968 968 1 ENSG00000196832.3 OR11G2 chr14 20197336 20198446 + protein_coding KNOWN OTTHUMG00000167700.2 1111 1111 1 ENSG00000258625.1 OR11H5P chr14 20209240 20210210 + unprocessed_pseudogene KNOWN OTTHUMG00000170849.1 971 971 1 ENSG00000266336.1 AL356019.1 chr14 20217154 20217239 - miRNA NOVEL NA 86 86 1 ENSG00000176219.2 OR11H6 chr14 20223632 20224805 + protein_coding KNOWN OTTHUMG00000170850.1 1174 1174 1 ENSG00000258806.1 OR11H7 chr14 20229402 20230341 + polymorphic_pseudogene KNOWN OTTHUMG00000170851.1 940 940 1 ENSG00000200674.1 RN7SKP160 chr1 173791548 173791887 + misc_RNA KNOWN NA 340 340 1 ENSG00000176198.2 OR11H4 chr14 20242739 20243820 + protein_coding KNOWN OTTHUMG00000170852.1 1082 1082 1 ENSG00000136319.10 TTC5 chr14 20256558 20305994 - protein_coding KNOWN OTTHUMG00000029506.5 49437 9705 42 ENSG00000258768.2 CTD-2292M16.8 chr14 20260480 20264308 - lincRNA NOVEL OTTHUMG00000178843.1 3829 3829 1 ENSG00000258459.1 CTD-2292M16.7 chr14 20305730 20306811 + antisense NOVEL OTTHUMG00000170853.1 1082 748 2 ENSG00000100814.16 CCNB1IP1 chr14 20311368 20333312 - protein_coding KNOWN OTTHUMG00000029509.4 21945 3680 88 ENSG00000222489.1 SNORA79 chr14 20323179 20323326 - snoRNA KNOWN NA 148 148 1 ENSG00000281684.1 AL355075.1 chr14 20323246 20323349 - miRNA NOVEL NA 104 104 1 ENSG00000238344.1 SNORD126 chr14 20326450 20326526 - snoRNA KNOWN NA 77 77 1 ENSG00000259001.3 RPPH1 chr14 20343048 20343685 - antisense NOVEL OTTHUMG00000170789.2 638 638 1 ENSG00000277209.1 RNaseP_nuc chr14 20343075 20343407 - ribozyme NOVEL NA 333 333 1 ENSG00000120334.14 CENPL chr1 173799550 173824720 - protein_coding KNOWN OTTHUMG00000034802.1 25171 4914 42 ENSG00000129484.12 PARP2 chr14 20343582 20357905 + protein_coding KNOWN OTTHUMG00000166106.3 14324 4096 78 ENSG00000254846.1 RP11-203M5.2 chr14 20344233 20346888 - antisense NOVEL OTTHUMG00000166107.1 2656 468 2 ENSG00000129566.11 TEP1 chr14 20365667 20413429 - protein_coding KNOWN OTTHUMG00000029515.4 47763 11328 260 ENSG00000200225.1 RNA5SP382 chr14 20414987 20415098 + rRNA KNOWN NA 112 112 1 ENSG00000185271.6 KLHL33 chr14 20428811 20435642 - protein_coding KNOWN OTTHUMG00000170982.1 6832 1863 4 ENSG00000259162.1 RP11-203M5.6 chr14 20437982 20441268 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000170983.1 3287 992 13 ENSG00000092094.9 OSGEP chr14 20446411 20455105 - protein_coding KNOWN OTTHUMG00000029543.4 8695 5037 62 ENSG00000258515.1 RP11-203M5.7 chr14 20451305 20451918 + antisense NOVEL OTTHUMG00000170984.1 614 478 2 ENSG00000100823.10 APEX1 chr14 20455191 20457772 + protein_coding KNOWN OTTHUMG00000029544.5 2582 1886 82 ENSG00000165782.9 TMEM55B chr14 20457719 20461612 - protein_coding KNOWN OTTHUMG00000029545.4 3894 3803 31 ENSG00000252357.1 Y_RNA chr1 173808489 173808622 + misc_RNA NOVEL NA 134 134 1 ENSG00000198805.10 PNP chr14 20468954 20477094 + protein_coding KNOWN OTTHUMG00000029546.3 8141 4139 31 ENSG00000258908.1 RP11-203M5.8 chr14 20474789 20477089 - lincRNA NOVEL OTTHUMG00000170985.1 2301 492 2 ENSG00000182545.6 RNASE10 chr14 20505537 20511169 + protein_coding KNOWN OTTHUMG00000170986.1 5633 1200 3 ENSG00000258456.2 PTCD2P1 chr14 20524287 20525422 - processed_pseudogene KNOWN OTTHUMG00000170987.2 1136 1136 1 ENSG00000258863.1 SETP1 chr14 20528115 20528959 - processed_pseudogene KNOWN OTTHUMG00000170988.1 845 845 1 ENSG00000188655.9 RNASE9 chr14 20556093 20560931 - protein_coding KNOWN OTTHUMG00000170989.1 4839 2710 39 ENSG00000259060.5 RNASE11 chr14 20582892 20609795 - protein_coding NOVEL OTTHUMG00000186017.1 26904 2467 9 ENSG00000173464.13 RNASE11 chr14 20583559 20609884 - protein_coding KNOWN OTTHUMG00000170990.1 26326 1851 32 ENSG00000258573.4 RP11-14J7.6 chr14 20587644 20607137 + antisense NOVEL OTTHUMG00000171009.1 19494 2685 17 ENSG00000258436.1 RNASE12 chr14 20590193 20590823 - protein_coding KNOWN OTTHUMG00000170991.1 631 631 1 ENSG00000117593.9 DARS2 chr1 173824503 173858546 + protein_coding KNOWN OTTHUMG00000034803.2 34044 3689 25 ENSG00000239327.1 RP11-14J7.1 chr14 20616644 20616991 - processed_pseudogene KNOWN OTTHUMG00000157646.1 348 348 1 ENSG00000181803.3 OR6S1 chr14 20640696 20641691 - protein_coding KNOWN OTTHUMG00000171010.1 996 996 1 ENSG00000199461.1 Y_RNA chr14 20679411 20679512 + misc_RNA NOVEL NA 102 102 1 ENSG00000258818.3 RNASE4 chr14 20684100 20701215 + protein_coding KNOWN OTTHUMG00000029575.4 17116 2613 6 ENSG00000214274.8 ANG chr14 20684177 20698971 + protein_coding KNOWN OTTHUMG00000029576.3 14795 1430 6 ENSG00000259171.1 RP11-903H12.5 chr14 20684587 20700576 + protein_coding PUTATIVE OTTHUMG00000187519.1 15990 1498 3 ENSG00000258451.1 RP11-903H12.3 chr14 20693480 20707120 - antisense NOVEL OTTHUMG00000171012.1 13641 915 4 ENSG00000259144.2 RANBP20P chr14 20720742 20723127 - processed_pseudogene KNOWN OTTHUMG00000171013.2 2386 2104 2 ENSG00000181562.3 EDDM3A chr14 20731699 20748380 + protein_coding KNOWN OTTHUMG00000029581.3 16682 1077 5 ENSG00000258963.1 EDDM3DP chr14 20734578 20735011 + unprocessed_pseudogene KNOWN OTTHUMG00000171014.1 434 434 1 ENSG00000270084.1 GAS5-AS1 chr1 173863248 173863941 + antisense KNOWN OTTHUMG00000184089.1 694 694 1 ENSG00000181552.3 EDDM3B chr14 20768427 20770948 + protein_coding KNOWN OTTHUMG00000029583.2 2522 896 2 ENSG00000169413.2 RNASE6 chr14 20781051 20782467 + protein_coding KNOWN OTTHUMG00000029585.2 1417 1061 2 ENSG00000258810.1 RP11-219E7.1 chr14 20783888 20784293 + antisense NOVEL OTTHUMG00000171036.1 406 294 2 ENSG00000129538.12 RNASE1 chr14 20801228 20803278 - protein_coding KNOWN OTTHUMG00000029603.3 2051 1506 12 ENSG00000259130.1 RP11-219E7.3 chr14 20870278 20873592 - lincRNA NOVEL OTTHUMG00000171037.1 3315 583 5 ENSG00000258642.1 RP11-219E7.2 chr14 20874305 20875768 - antisense NOVEL OTTHUMG00000171038.1 1464 764 2 ENSG00000169397.3 RNASE3 chr14 20891399 20892348 + protein_coding KNOWN OTTHUMG00000029604.2 950 720 2 ENSG00000258918.1 RP11-219E7.4 chr14 20897985 20936255 - lincRNA NOVEL OTTHUMG00000171039.1 38271 351 2 ENSG00000258772.1 RP11-84C10.3 chr14 20916766 20928580 - lincRNA NOVEL OTTHUMG00000171040.1 11815 449 2 ENSG00000136315.4 RP11-84C10.2 chr14 20919361 20920299 + lincRNA NOVEL OTTHUMG00000171041.1 939 337 2 ENSG00000234741.6 GAS5 chr1 173863900 173868882 - processed_transcript KNOWN OTTHUMG00000037216.4 4983 3631 228 ENSG00000169385.2 RNASE2 chr14 20955452 20956436 + protein_coding KNOWN OTTHUMG00000029607.2 985 755 2 ENSG00000243817.3 RN7SL189P chr14 20963579 20963867 + misc_RNA KNOWN NA 289 289 1 ENSG00000258599.2 RP11-84C10.1 chr14 20983155 20985066 - processed_pseudogene KNOWN OTTHUMG00000171042.2 1912 578 2 ENSG00000165792.16 METTL17 chr14 20989770 20997035 + protein_coding KNOWN OTTHUMG00000029610.6 7266 4449 162 ENSG00000258471.1 RP11-84C10.4 chr14 20995837 20999163 - antisense NOVEL OTTHUMG00000171043.1 3327 1398 4 ENSG00000165794.8 SLC39A2 chr14 20999255 21001871 + protein_coding KNOWN OTTHUMG00000029616.3 2617 1575 10 ENSG00000165795.19 NDRG2 chr14 21016763 21070872 - protein_coding KNOWN OTTHUMG00000029619.7 54110 7550 693 ENSG00000278629.1 MIR6717 chr14 21023314 21023386 - miRNA KNOWN NA 73 73 1 ENSG00000179636.13 TPPP2 chr14 21024109 21036276 + protein_coding KNOWN OTTHUMG00000171071.1 12168 2475 37 ENSG00000258604.1 AL161668.5 chr14 21024172 21029271 + lincRNA NOVEL OTTHUMG00000029642.5 5100 593 5 ENSG00000185278.13 ZBTB37 chr1 173868082 173903549 + protein_coding KNOWN OTTHUMG00000037274.5 35468 19464 22 ENSG00000255472.1 RP11-998D10.1 chr14 21032818 21033895 + antisense NOVEL OTTHUMG00000166117.1 1078 492 2 ENSG00000206150.3 RNASE13 chr14 21032820 21034785 - protein_coding KNOWN OTTHUMG00000171110.1 1966 1607 2 ENSG00000165799.4 RNASE7 chr14 21042226 21044234 + protein_coding KNOWN OTTHUMG00000171358.1 2009 1499 5 ENSG00000173431.2 RNASE8 chr14 21057822 21058455 + protein_coding KNOWN OTTHUMG00000029645.3 634 634 1 ENSG00000165801.8 ARHGEF40 chr14 21070270 21090240 + protein_coding KNOWN OTTHUMG00000171359.1 19971 8189 105 ENSG00000165804.14 ZNF219 chr14 21090046 21104722 - protein_coding KNOWN OTTHUMG00000029647.4 14677 6679 42 ENSG00000232070.7 TMEM253 chr14 21098937 21103724 + protein_coding KNOWN OTTHUMG00000171361.2 4788 1961 29 ENSG00000178107.2 RP11-998D10.4 chr14 21108043 21116703 + lincRNA NOVEL OTTHUMG00000171362.1 8661 358 2 ENSG00000258722.2 CKAP2P1 chr14 21110295 21113472 - processed_pseudogene KNOWN OTTHUMG00000171363.2 3178 2049 3 ENSG00000200102.1 RNU6-252P chr14 21113639 21113745 - snRNA KNOWN NA 107 107 1 ENSG00000242349.4 NPPA-AS1 chr1 11841017 11848079 + antisense KNOWN OTTHUMG00000002377.2 7063 1427 7 ENSG00000117601.12 SERPINC1 chr1 173903804 173917378 - protein_coding KNOWN OTTHUMG00000037276.1 13575 1768 20 ENSG00000169327.4 OR5AU1 chr14 21154865 21156063 - protein_coding KNOWN OTTHUMG00000170753.1 1199 1199 1 ENSG00000259102.2 SMARCE1P3 chr14 21162513 21163743 + processed_pseudogene KNOWN OTTHUMG00000170754.2 1231 1231 1 ENSG00000258906.2 CTD-2552B11.3 chr14 21184341 21184959 - processed_pseudogene KNOWN OTTHUMG00000170755.2 619 619 1 ENSG00000258441.1 LINC00641 chr14 21200079 21206900 - processed_transcript NOVEL OTTHUMG00000170756.1 6822 5715 3 ENSG00000092199.16 HNRNPC chr14 21209136 21269494 - protein_coding KNOWN OTTHUMG00000170757.1 60359 7309 230 ENSG00000092200.11 RPGRIP1 chr14 21287939 21351301 + protein_coding KNOWN OTTHUMG00000170758.1 63363 5470 150 ENSG00000092201.8 SUPT16H chr14 21351472 21384266 - protein_coding KNOWN OTTHUMG00000029685.3 32795 7151 57 ENSG00000260830.1 RP11-524O1.4 chr14 21384292 21384920 + antisense NOVEL OTTHUMG00000172910.1 629 629 1 ENSG00000100888.11 CHD8 chr14 21385194 21456126 - protein_coding KNOWN OTTHUMG00000170759.2 70933 9781 166 ENSG00000199436.1 SNORD9 chr14 21392150 21392253 - snoRNA KNOWN NA 104 104 1 ENSG00000252231.1 RNA5SP67 chr1 173921070 173921200 + rRNA KNOWN NA 131 131 1 ENSG00000200785.1 SNORD8 chr14 21397292 21397401 - snoRNA KNOWN NA 110 110 1 ENSG00000241035.2 RP11-689J19.1 chr14 21398925 21399282 + processed_pseudogene KNOWN OTTHUMG00000158015.2 358 358 1 ENSG00000258870.1 EIF4EBP1P1 chr14 21419620 21419960 + processed_pseudogene KNOWN OTTHUMG00000170805.1 341 341 1 ENSG00000274475.1 Metazoa_SRP chr14 21429508 21429806 - misc_RNA NOVEL NA 299 299 1 ENSG00000129472.11 RAB2B chr14 21459020 21476973 - protein_coding KNOWN OTTHUMG00000029693.6 17954 3610 35 ENSG00000092203.12 TOX4 chr14 21476597 21499175 + protein_coding KNOWN OTTHUMG00000150278.4 22579 7091 63 ENSG00000165819.10 METTL3 chr14 21498133 21511375 - protein_coding KNOWN OTTHUMG00000168825.3 13243 5894 82 ENSG00000165821.10 SALL2 chr14 21521081 21537216 - protein_coding KNOWN OTTHUMG00000168826.4 16136 5382 20 ENSG00000257096.1 AE000658.22 chr14 21521083 21522660 + antisense NOVEL OTTHUMG00000168827.1 1578 472 2 ENSG00000256737.1 RBBP4P5 chr14 21563819 21565084 + processed_pseudogene KNOWN OTTHUMG00000168828.1 1266 1266 1 ENSG00000135870.10 RC3H1 chr1 173931214 174022297 - protein_coding KNOWN OTTHUMG00000037275.4 91084 11508 64 ENSG00000169208.1 OR10G3 chr14 21569803 21570744 - protein_coding KNOWN OTTHUMG00000168886.1 942 942 1 ENSG00000256081.2 AE000658.25 chr14 21585290 21586280 - processed_pseudogene KNOWN OTTHUMG00000168887.3 991 991 1 ENSG00000273586.1 AE000658.26 chr14 21601899 21602825 - unprocessed_pseudogene KNOWN OTTHUMG00000188541.1 927 927 1 ENSG00000256385.1 UBE2NP1 chr14 21611924 21612381 - processed_pseudogene KNOWN OTTHUMG00000168889.2 458 458 1 ENSG00000255569.1 TRAV1-1 chr14 21621838 21622567 + TR_V_gene KNOWN OTTHUMG00000168977.1 730 392 2 ENSG00000255582.1 OR10G2 chr14 21633836 21634940 - protein_coding KNOWN OTTHUMG00000168890.2 1105 1105 1 ENSG00000256553.1 TRAV1-2 chr14 21642889 21643578 + TR_V_gene KNOWN OTTHUMG00000168978.2 690 402 2 ENSG00000255664.1 ARL6IP1P1 chr14 21649728 21650337 - processed_pseudogene KNOWN OTTHUMG00000168891.1 610 610 1 ENSG00000221977.1 OR4E2 chr14 21665083 21666024 + protein_coding KNOWN OTTHUMG00000168979.2 942 942 1 ENSG00000276240.1 CH17-451C3.1 chr14 21669990 21670935 - processed_pseudogene KNOWN OTTHUMG00000188249.1 946 946 1 ENSG00000200755.1 RNA5SP68 chr1 173969318 173969436 - rRNA KNOWN NA 119 119 1 ENSG00000256350.1 AE000658.30 chr14 21698954 21699151 - unprocessed_pseudogene KNOWN OTTHUMG00000168892.2 198 198 1 ENSG00000211776.2 TRAV2 chr14 21712321 21712843 + TR_V_gene KNOWN OTTHUMG00000168980.1 523 348 2 ENSG00000248358.2 AE000658.31 chr14 21714795 21716262 - lincRNA NOVEL OTTHUMG00000168893.1 1468 570 2 ENSG00000211777.2 TRAV3 chr14 21723713 21724321 + TR_V_gene KNOWN OTTHUMG00000168981.1 609 519 2 ENSG00000211778.2 TRAV4 chr14 21736152 21736982 + TR_V_gene KNOWN OTTHUMG00000168982.1 831 395 2 ENSG00000211779.3 TRAV5 chr14 21749178 21749705 + TR_V_gene KNOWN OTTHUMG00000168983.1 528 352 2 ENSG00000240954.1 RPL4P1 chr14 21750269 21751546 + processed_pseudogene KNOWN OTTHUMG00000157660.2 1278 1278 1 ENSG00000211780.3 TRAV6 chr14 21768489 21769080 + TR_V_gene KNOWN OTTHUMG00000168984.2 592 404 2 ENSG00000222776.1 AC243980.1 chr14 21780568 21780649 + miRNA NOVEL NA 82 82 1 ENSG00000211781.3 TRAV7 chr14 21782993 21783503 + TR_V_gene KNOWN OTTHUMG00000168985.1 511 337 2 ENSG00000236535.1 RC3H1-IT1 chr1 174009267 174016206 - sense_intronic NOVEL OTTHUMG00000034823.1 6940 448 2 ENSG00000211782.2 TRAV8-1 chr14 21797287 21797886 + TR_V_gene KNOWN OTTHUMG00000168986.1 600 473 2 ENSG00000211783.3 TRAV9-1 chr14 21811502 21811977 + TR_V_gene KNOWN OTTHUMG00000168987.1 476 338 2 ENSG00000211784.2 TRAV10 chr14 21825472 21826075 + TR_V_gene KNOWN OTTHUMG00000168988.2 604 379 2 ENSG00000256474.1 TRAV11 chr14 21829539 21830070 + TR_V_pseudogene KNOWN OTTHUMG00000168989.1 532 339 2 ENSG00000211785.1 TRAV12-1 chr14 21841240 21841774 + TR_V_gene KNOWN OTTHUMG00000168990.1 535 340 2 ENSG00000211786.3 TRAV8-2 chr14 21846537 21847221 + TR_V_gene KNOWN OTTHUMG00000168991.2 685 566 2 ENSG00000211787.1 TRAV8-3 chr14 21852558 21853006 + TR_V_gene KNOWN OTTHUMG00000168992.1 449 341 2 ENSG00000211788.2 TRAV13-1 chr14 21868839 21869365 + TR_V_gene KNOWN OTTHUMG00000168993.1 527 360 2 ENSG00000211789.2 TRAV12-2 chr14 21887857 21888502 + TR_V_gene KNOWN OTTHUMG00000168994.1 646 445 2 ENSG00000211790.2 TRAV8-4 chr14 21894433 21895030 + TR_V_gene KNOWN OTTHUMG00000168995.1 598 469 2 ENSG00000224977.1 RP11-160H22.3 chr1 174022509 174022985 + lincRNA NOVEL OTTHUMG00000034820.1 477 335 2 ENSG00000256379.1 TRAV8-5 chr14 21903077 21903598 + TR_V_pseudogene KNOWN OTTHUMG00000168996.1 522 414 2 ENSG00000211791.2 TRAV13-2 chr14 21918188 21918756 + TR_V_gene KNOWN OTTHUMG00000168997.1 569 410 2 ENSG00000211792.2 TRAV14DV4 chr14 21924063 21924651 + TR_V_gene KNOWN OTTHUMG00000168998.2 589 425 2 ENSG00000211793.2 TRAV9-2 chr14 21941128 21941657 + TR_V_gene KNOWN OTTHUMG00000170637.2 530 394 2 ENSG00000258482.1 TRAV15 chr14 21950406 21950654 + TR_V_pseudogene KNOWN OTTHUMG00000170638.1 249 249 1 ENSG00000258557.1 AE000659.41 chr14 21962819 21963042 - processed_pseudogene KNOWN OTTHUMG00000170639.1 224 224 1 ENSG00000211794.3 TRAV12-3 chr14 21965451 21966061 + TR_V_gene KNOWN OTTHUMG00000170640.1 611 399 2 ENSG00000211795.3 TRAV8-6 chr14 21978459 21979120 + TR_V_gene KNOWN OTTHUMG00000170641.2 662 561 2 ENSG00000211796.1 TRAV16 chr14 21990496 21990938 + TR_V_gene KNOWN OTTHUMG00000170642.1 443 329 2 ENSG00000211797.2 TRAV17 chr14 21997539 21998168 + TR_V_gene KNOWN OTTHUMG00000170643.1 630 484 2 ENSG00000225713.5 RPL30P1 chr1 174090136 174090474 - processed_pseudogene KNOWN OTTHUMG00000034821.2 339 339 1 ENSG00000211798.3 TRAV18 chr14 22003106 22003673 + TR_V_gene KNOWN OTTHUMG00000170644.1 568 440 2 ENSG00000211799.3 TRAV19 chr14 22007512 22008181 + TR_V_gene KNOWN OTTHUMG00000170645.1 670 467 2 ENSG00000258705.2 AE000660.4 chr14 22011910 22014964 + processed_pseudogene KNOWN OTTHUMG00000170646.3 3055 3055 1 ENSG00000211800.3 TRAV20 chr14 22040594 22041153 + TR_V_gene KNOWN OTTHUMG00000170647.2 560 406 2 ENSG00000211801.3 TRAV21 chr14 22052514 22053056 + TR_V_gene KNOWN OTTHUMG00000170648.1 543 343 2 ENSG00000276428.1 AE000660.21 chr14 22066016 22066373 + processed_pseudogene KNOWN OTTHUMG00000187833.1 358 358 1 ENSG00000211802.3 TRAV22 chr14 22070557 22071208 + TR_V_gene KNOWN OTTHUMG00000170649.1 652 464 2 ENSG00000211803.2 TRAV23DV6 chr14 22086407 22086961 + TR_V_gene KNOWN OTTHUMG00000170650.2 555 409 2 ENSG00000211804.3 TRDV1 chr14 22096032 22096619 + TR_V_gene KNOWN OTTHUMG00000170651.1 588 365 3 ENSG00000211805.1 TRAV24 chr14 22105343 22105846 + TR_V_gene KNOWN OTTHUMG00000170652.1 504 343 2 ENSG00000238365.2 RNU7-57P chr1 174095241 174095302 - snRNA KNOWN NA 62 62 1 ENSG00000211806.2 TRAV25 chr14 22112347 22113031 + TR_V_gene KNOWN OTTHUMG00000170653.1 685 403 2 ENSG00000211807.3 TRAV26-1 chr14 22123318 22124285 + TR_V_gene KNOWN OTTHUMG00000170654.2 968 537 2 ENSG00000211808.3 TRAV8-7 chr14 22132553 22133034 + TR_V_gene KNOWN OTTHUMG00000170655.2 482 341 2 ENSG00000238634.1 AC245470.1 chr14 22142926 22143003 + miRNA NOVEL NA 78 78 1 ENSG00000211809.2 TRAV27 chr14 22147995 22148633 + TR_V_gene KNOWN OTTHUMG00000170656.2 639 425 2 ENSG00000258835.1 TRAV28 chr14 22155079 22155638 + TR_V_pseudogene KNOWN OTTHUMG00000170657.2 560 323 2 ENSG00000211810.3 TRAV29DV5 chr14 22163238 22163870 + TR_V_gene KNOWN OTTHUMG00000170658.2 633 469 2 ENSG00000259092.1 TRAV30 chr14 22168429 22168988 + TR_V_gene KNOWN OTTHUMG00000170659.2 560 337 2 ENSG00000249048.2 TRAV31 chr14 22177273 22177864 + TR_V_pseudogene KNOWN OTTHUMG00000170660.2 592 342 2 ENSG00000258905.1 TRAV32 chr14 22185562 22186057 + TR_V_pseudogene KNOWN OTTHUMG00000170661.1 496 340 2 ENSG00000227373.4 RP11-160H22.5 chr1 174115300 174160004 - lincRNA NOVEL OTTHUMG00000034822.1 44705 1158 14 ENSG00000258812.1 TRAV33 chr14 22190158 22190713 + TR_V_pseudogene KNOWN OTTHUMG00000170662.1 556 338 2 ENSG00000211812.1 TRAV26-2 chr14 22202583 22203368 + TR_V_gene KNOWN OTTHUMG00000170663.1 786 327 2 ENSG00000211813.2 TRAV34 chr14 22207522 22208129 + TR_V_gene KNOWN OTTHUMG00000170664.1 608 349 2 ENSG00000211814.1 TRAV35 chr14 22221896 22222475 + TR_V_pseudogene KNOWN OTTHUMG00000170665.2 580 330 2 ENSG00000211815.3 TRAV36DV7 chr14 22226746 22227254 + TR_V_gene KNOWN OTTHUMG00000170666.2 509 356 2 ENSG00000259068.1 TRAV37 chr14 22265749 22266264 + TR_V_pseudogene KNOWN OTTHUMG00000170836.1 516 342 2 ENSG00000211816.2 TRAV38-1 chr14 22271968 22272563 + TR_V_gene KNOWN OTTHUMG00000170837.1 596 353 2 ENSG00000277734.3 TRAC chr14 22281105 22552155 + TR_C_gene KNOWN OTTHUMG00000028683.7 271051 1968 33 ENSG00000211817.2 TRAV38-2DV8 chr14 22281105 22281748 + TR_V_gene KNOWN OTTHUMG00000170838.1 644 395 2 ENSG00000211818.1 TRAV39 chr14 22304054 22304553 + TR_V_gene KNOWN OTTHUMG00000170839.1 500 331 2 ENSG00000152061.20 RABGAP1L chr1 174159410 174995308 + protein_coding KNOWN OTTHUMG00000034899.7 835899 13708 178 ENSG00000211819.3 TRAV40 chr14 22314490 22314919 + TR_V_gene KNOWN OTTHUMG00000170840.1 430 317 2 ENSG00000211820.1 TRAV41 chr14 22320188 22320691 + TR_V_gene KNOWN OTTHUMG00000170841.1 504 336 2 ENSG00000256221.1 AE000661.36 chr14 22332922 22334685 - processed_pseudogene KNOWN OTTHUMG00000168894.1 1764 851 2 ENSG00000251002.6 AE000661.37 chr14 22380680 22482959 - processed_transcript NOVEL OTTHUMG00000168895.3 102280 3284 26 ENSG00000259042.2 AE000661.50 chr14 22417836 22418657 + lincRNA NOVEL OTTHUMG00000170842.2 822 457 2 ENSG00000211821.2 TRDV2 chr14 22422371 22423042 + TR_V_gene KNOWN OTTHUMG00000170843.1 672 520 2 ENSG00000211829.5 TRDC chr14 22422546 22465787 + TR_C_gene KNOWN OTTHUMG00000170905.1 43242 1141 13 ENSG00000223997.1 TRDD1 chr14 22438547 22438554 + TR_D_gene KNOWN OTTHUMG00000170844.1 8 8 1 ENSG00000237235.2 TRDD2 chr14 22439007 22439015 + TR_D_gene KNOWN OTTHUMG00000170845.1 9 9 1 ENSG00000228985.1 TRDD3 chr14 22449113 22449125 + TR_D_gene KNOWN OTTHUMG00000170846.1 13 13 1 ENSG00000276470.1 NPPA-AS1_1 chr1 11843812 11843984 + misc_RNA NOVEL NA 173 173 1 ENSG00000266125.1 AL022400.1 chr1 174348265 174348355 + miRNA NOVEL NA 91 91 1 ENSG00000211825.1 TRDJ1 chr14 22450089 22450139 + TR_J_gene KNOWN OTTHUMG00000170847.1 51 51 1 ENSG00000211826.1 TRDJ4 chr14 22455249 22455296 + TR_J_gene KNOWN OTTHUMG00000170902.1 48 48 1 ENSG00000211827.1 TRDJ2 chr14 22456689 22456742 + TR_J_gene KNOWN OTTHUMG00000170903.1 54 54 1 ENSG00000211828.1 TRDJ3 chr14 22459098 22459156 + TR_J_gene KNOWN OTTHUMG00000170904.1 59 59 1 ENSG00000256590.2 TRDV3 chr14 22469041 22469698 - TR_V_gene KNOWN OTTHUMG00000168896.2 658 425 2 ENSG00000211831.2 TRAJ61 chr14 22475316 22475375 + TR_J_gene KNOWN OTTHUMG00000170906.1 60 60 1 ENSG00000249446.2 TRAJ60 chr14 22476306 22476362 + TR_J_pseudogene KNOWN OTTHUMG00000170907.1 57 57 1 ENSG00000211832.2 TRAJ59 chr14 22476553 22476606 + TR_J_gene KNOWN OTTHUMG00000170908.1 54 54 1 ENSG00000211833.1 TRAJ58 chr14 22477707 22477769 + TR_J_gene KNOWN OTTHUMG00000170909.1 63 63 1 ENSG00000211834.1 TRAJ57 chr14 22478872 22478934 + TR_J_gene KNOWN OTTHUMG00000170910.1 63 63 1 ENSG00000237317.2 RP4-809F4.1 chr1 174367105 174368039 - processed_pseudogene KNOWN OTTHUMG00000034900.2 935 935 1 ENSG00000211835.1 TRAJ56 chr14 22479521 22479582 + TR_J_gene KNOWN OTTHUMG00000170911.1 62 62 1 ENSG00000250688.1 TRAJ55 chr14 22481697 22481753 + TR_J_pseudogene KNOWN OTTHUMG00000170912.1 57 57 1 ENSG00000211836.1 TRAJ54 chr14 22482287 22482346 + TR_J_gene KNOWN OTTHUMG00000170913.1 60 60 1 ENSG00000211837.1 TRAJ53 chr14 22483004 22483069 + TR_J_gene KNOWN OTTHUMG00000170914.1 66 66 1 ENSG00000211838.1 TRAJ52 chr14 22486228 22486296 + TR_J_gene KNOWN OTTHUMG00000170915.1 69 69 1 ENSG00000248366.1 TRAJ51 chr14 22487183 22487245 + TR_J_pseudogene KNOWN OTTHUMG00000170916.1 63 63 1 ENSG00000211839.1 TRAJ50 chr14 22488593 22488652 + TR_J_gene KNOWN OTTHUMG00000170917.1 60 60 1 ENSG00000211840.1 TRAJ49 chr14 22489488 22489543 + TR_J_gene KNOWN OTTHUMG00000170918.1 56 56 1 ENSG00000211841.1 TRAJ48 chr14 22490491 22490553 + TR_J_gene KNOWN OTTHUMG00000170919.1 63 63 1 ENSG00000211842.1 TRAJ47 chr14 22492851 22492907 + TR_J_gene KNOWN OTTHUMG00000170920.1 57 57 1 ENSG00000203737.3 GPR52 chr1 174448111 174449198 + protein_coding KNOWN OTTHUMG00000034901.1 1088 1088 1 ENSG00000211843.1 TRAJ46 chr14 22493403 22493465 + TR_J_gene KNOWN OTTHUMG00000170921.1 63 63 1 ENSG00000211844.1 TRAJ45 chr14 22493925 22493990 + TR_J_gene KNOWN OTTHUMG00000170922.1 66 66 1 ENSG00000211845.1 TRAJ44 chr14 22494821 22494883 + TR_J_gene KNOWN OTTHUMG00000170923.1 63 63 1 ENSG00000211846.1 TRAJ43 chr14 22495913 22495966 + TR_J_gene KNOWN OTTHUMG00000170924.1 54 54 1 ENSG00000211847.1 TRAJ42 chr14 22496887 22496952 + TR_J_gene KNOWN OTTHUMG00000170925.1 66 66 1 ENSG00000211848.1 TRAJ41 chr14 22497657 22497718 + TR_J_gene KNOWN OTTHUMG00000170926.1 62 62 1 ENSG00000211849.1 TRAJ40 chr14 22499689 22499749 + TR_J_gene KNOWN OTTHUMG00000170927.1 61 61 1 ENSG00000211850.1 TRAJ39 chr14 22501601 22501663 + TR_J_gene KNOWN OTTHUMG00000170928.1 63 63 1 ENSG00000211851.1 TRAJ38 chr14 22502231 22502292 + TR_J_gene KNOWN OTTHUMG00000170929.1 62 62 1 ENSG00000278661.1 TRAJ37 chr14 22503750 22503814 + TR_J_gene NOVEL OTTHUMG00000188542.1 65 65 1 ENSG00000223828.1 BANF1P4 chr1 174756850 174757119 - processed_pseudogene KNOWN OTTHUMG00000034935.1 270 270 1 ENSG00000276699.1 TRAJ36 chr14 22505110 22505167 + TR_J_gene KNOWN OTTHUMG00000188544.1 58 58 1 ENSG00000211854.1 TRAJ35 chr14 22506644 22506702 + TR_J_gene KNOWN OTTHUMG00000170932.1 59 59 1 ENSG00000211855.1 TRAJ34 chr14 22507666 22507723 + TR_J_gene KNOWN OTTHUMG00000170933.1 58 58 1 ENSG00000211856.1 TRAJ33 chr14 22508602 22508658 + TR_J_gene KNOWN OTTHUMG00000170934.1 57 57 1 ENSG00000211857.1 TRAJ32 chr14 22509341 22509406 + TR_J_gene KNOWN OTTHUMG00000170935.2 66 66 1 ENSG00000211858.1 TRAJ31 chr14 22510968 22511024 + TR_J_gene KNOWN OTTHUMG00000170936.1 57 57 1 ENSG00000211859.1 TRAJ30 chr14 22512852 22512908 + TR_J_gene KNOWN OTTHUMG00000170937.1 57 57 1 ENSG00000211860.1 TRAJ29 chr14 22513939 22513998 + TR_J_gene KNOWN OTTHUMG00000170938.1 60 60 1 ENSG00000211861.1 TRAJ28 chr14 22515623 22515688 + TR_J_gene KNOWN OTTHUMG00000170939.1 66 66 1 ENSG00000211862.1 TRAJ27 chr14 22516273 22516331 + TR_J_gene KNOWN OTTHUMG00000170940.1 59 59 1 ENSG00000231378.1 NDUFAF4P4 chr1 174849667 174850168 - processed_pseudogene KNOWN OTTHUMG00000034937.1 502 502 1 ENSG00000211863.1 TRAJ26 chr14 22518446 22518505 + TR_J_gene KNOWN OTTHUMG00000170941.1 60 60 1 ENSG00000211864.2 TRAJ25 chr14 22518812 22518871 + TR_J_gene KNOWN OTTHUMG00000170942.1 60 60 1 ENSG00000211865.1 TRAJ24 chr14 22519969 22520031 + TR_J_gene KNOWN OTTHUMG00000170943.2 63 63 1 ENSG00000211866.1 TRAJ23 chr14 22520416 22520478 + TR_J_gene KNOWN OTTHUMG00000170944.1 63 63 1 ENSG00000211867.1 TRAJ22 chr14 22522040 22522102 + TR_J_gene KNOWN OTTHUMG00000170945.1 63 63 1 ENSG00000211868.1 TRAJ21 chr14 22523600 22523654 + TR_J_gene KNOWN OTTHUMG00000170946.1 55 55 1 ENSG00000211869.1 TRAJ20 chr14 22524325 22524381 + TR_J_gene KNOWN OTTHUMG00000170947.1 57 57 1 ENSG00000211870.1 TRAJ19 chr14 22525263 22525322 + TR_J_gene KNOWN OTTHUMG00000170948.1 60 60 1 ENSG00000211871.1 TRAJ18 chr14 22525650 22525715 + TR_J_gene KNOWN OTTHUMG00000170949.1 66 66 1 ENSG00000211872.1 TRAJ17 chr14 22526844 22526906 + TR_J_gene KNOWN OTTHUMG00000170950.1 63 63 1 ENSG00000237249.1 RP1-102G20.2 chr1 174892417 174893155 + processed_pseudogene KNOWN OTTHUMG00000034936.1 739 395 2 ENSG00000211873.1 TRAJ16 chr14 22528527 22528586 + TR_J_gene KNOWN OTTHUMG00000170951.2 60 60 1 ENSG00000211875.1 TRAJ14 chr14 22530327 22530378 + TR_J_gene KNOWN OTTHUMG00000170953.1 52 52 1 ENSG00000211876.1 TRAJ13 chr14 22531076 22531138 + TR_J_gene KNOWN OTTHUMG00000170954.2 63 63 1 ENSG00000211877.1 TRAJ12 chr14 22531939 22531998 + TR_J_gene KNOWN OTTHUMG00000170955.1 60 60 1 ENSG00000211878.1 TRAJ11 chr14 22532502 22532561 + TR_J_gene KNOWN OTTHUMG00000170956.1 60 60 1 ENSG00000211879.1 TRAJ10 chr14 22533497 22533560 + TR_J_gene KNOWN OTTHUMG00000170957.1 64 64 1 ENSG00000211880.1 TRAJ9 chr14 22535554 22535614 + TR_J_gene KNOWN OTTHUMG00000170958.1 61 61 1 ENSG00000211881.1 TRAJ8 chr14 22536145 22536204 + TR_J_pseudogene KNOWN OTTHUMG00000170959.2 60 60 1 ENSG00000211882.1 TRAJ7 chr14 22537622 22537680 + TR_J_gene KNOWN OTTHUMG00000170960.1 59 59 1 ENSG00000211883.1 TRAJ6 chr14 22539073 22539134 + TR_J_gene KNOWN OTTHUMG00000170961.1 62 62 1 ENSG00000223525.1 RABGAP1L-IT1 chr1 174896958 174897996 + sense_intronic NOVEL OTTHUMG00000034938.1 1039 737 2 ENSG00000211884.1 TRAJ5 chr14 22540247 22540306 + TR_J_gene KNOWN OTTHUMG00000170962.1 60 60 1 ENSG00000211885.1 TRAJ4 chr14 22542199 22542261 + TR_J_gene KNOWN OTTHUMG00000170963.1 63 63 1 ENSG00000211886.1 TRAJ3 chr14 22543179 22543240 + TR_J_gene KNOWN OTTHUMG00000170964.1 62 62 1 ENSG00000211887.2 TRAJ2 chr14 22544071 22544136 + TR_J_gene KNOWN OTTHUMG00000170965.1 66 66 1 ENSG00000211888.2 TRAJ1 chr14 22545037 22545098 + TR_J_gene KNOWN OTTHUMG00000170966.1 62 62 1 ENSG00000259054.1 AE000662.93 chr14 22556311 22557062 - lincRNA NOVEL OTTHUMG00000170967.2 752 386 3 ENSG00000259003.1 AE000662.92 chr14 22556640 22559037 + lincRNA NOVEL OTTHUMG00000170968.2 2398 781 4 ENSG00000129562.9 DAD1 chr14 22564905 22589269 - protein_coding KNOWN OTTHUMG00000028685.5 24365 808 14 ENSG00000275552.1 CH17-302M23.1 chr14 22595808 22598946 - antisense NOVEL OTTHUMG00000188279.1 3139 2671 2 ENSG00000100439.9 ABHD4 chr14 22598237 22613215 + protein_coding KNOWN OTTHUMG00000028686.6 14979 4070 47 ENSG00000235869.1 RP1-102G20.4 chr1 174922107 174922440 - processed_pseudogene KNOWN OTTHUMG00000034939.1 334 334 1 ENSG00000255804.1 OR6J1 chr14 22633768 22634811 - protein_coding KNOWN OTTHUMG00000168897.2 1044 1044 1 ENSG00000279510.1 AC243945.1 chr14 22638099 22638473 - protein_coding KNOWN NA 375 375 1 ENSG00000242061.1 CTD-2555K7.1 chr14 22694098 22694535 - processed_pseudogene KNOWN OTTHUMG00000157667.1 438 438 1 ENSG00000235213.1 OR6E1P chr14 22702143 22703065 + unprocessed_pseudogene KNOWN OTTHUMG00000154330.1 923 923 1 ENSG00000258458.4 CTD-2555K7.2 chr14 22702611 22766562 - processed_transcript NOVEL OTTHUMG00000170992.1 63952 1378 14 ENSG00000258823.1 CTD-2555K7.3 chr14 22723476 22726572 - unprocessed_pseudogene KNOWN OTTHUMG00000170993.1 3097 767 4 ENSG00000212302.1 SNORD41 chr14 22756761 22756829 - snoRNA NOVEL NA 69 69 1 ENSG00000155463.11 OXA1L chr14 22766522 22773041 + protein_coding KNOWN OTTHUMG00000028691.8 6520 4497 90 ENSG00000155465.17 SLC7A7 chr14 22773222 22829820 - protein_coding KNOWN OTTHUMG00000028692.11 56599 5131 126 ENSG00000172590.17 MRPL52 chr14 22829879 22835037 + protein_coding KNOWN OTTHUMG00000028703.10 5159 3213 68 ENSG00000229531.4 RP1-102G20.5 chr1 174934947 174954261 - antisense NOVEL OTTHUMG00000034940.1 19315 971 8 ENSG00000157227.11 MMP14 chr14 22836557 22849027 + protein_coding KNOWN OTTHUMG00000028704.3 12471 4464 30 ENSG00000212335.1 Y_RNA chr14 22852616 22852728 - misc_RNA NOVEL NA 113 113 1 ENSG00000199716.1 Y_RNA chr14 22867818 22867917 + misc_RNA NOVEL NA 100 100 1 ENSG00000197324.7 LRP10 chr14 22871613 22881580 + protein_coding KNOWN OTTHUMG00000028705.3 9968 7112 27 ENSG00000139890.8 REM2 chr14 22883165 22887686 + protein_coding KNOWN OTTHUMG00000170277.1 4522 2305 8 ENSG00000100461.16 RBM23 chr14 22893206 22919184 - protein_coding KNOWN OTTHUMG00000171467.8 25979 14022 204 ENSG00000237054.8 PRMT5-AS1 chr14 22918947 22926900 + antisense NOVEL OTTHUMG00000149898.8 7954 3194 20 ENSG00000100462.14 PRMT5 chr14 22920511 22929585 - protein_coding KNOWN OTTHUMG00000028709.9 9075 3467 199 ENSG00000257285.4 RP11-298I3.1 chr14 22929609 22955562 + antisense NOVEL OTTHUMG00000170278.1 25954 989 6 ENSG00000092036.15 HAUS4 chr14 22946228 22957161 - protein_coding KNOWN OTTHUMG00000028710.6 10934 2539 138 ENSG00000252552.1 RNU6-307P chr1 174996524 174996629 + snRNA KNOWN NA 106 106 1 ENSG00000259132.1 RP11-298I3.5 chr14 22946270 22982258 - protein_coding PUTATIVE OTTHUMG00000171458.2 35989 835 5 ENSG00000265037.1 MIR4707 chr14 22956950 22957029 - miRNA KNOWN NA 80 80 1 ENSG00000129474.14 AJUBA chr14 22971174 22982642 - protein_coding KNOWN OTTHUMG00000028711.4 11469 5979 45 ENSG00000258457.4 RP11-298I3.4 chr14 22982698 22999078 + antisense NOVEL OTTHUMG00000171451.1 16381 1462 11 ENSG00000100802.13 C14orf93 chr14 22985908 23010166 - protein_coding KNOWN OTTHUMG00000028712.10 24259 4243 94 ENSG00000280129.1 RP11-298I3.3 chr14 23005499 23007123 - TEC KNOWN OTTHUMG00000171425.1 1625 1625 1 ENSG00000100804.17 PSMB5 chr14 23016543 23035230 - protein_coding KNOWN OTTHUMG00000028713.5 18688 1765 18 ENSG00000279656.1 RP11-298I3.6 chr14 23023083 23024217 - TEC KNOWN OTTHUMG00000172912.1 1135 1135 1 ENSG00000207765.1 AL132780.1 chr14 23033530 23033638 - miRNA NOVEL NA 109 109 1 ENSG00000222028.3 PSMB11 chr14 23042167 23044276 + protein_coding KNOWN OTTHUMG00000170279.1 2110 2110 1 ENSG00000278852.1 NPPA-AS1_2 chr1 11845549 11845697 + misc_RNA NOVEL NA 149 149 1 ENSG00000116161.16 CACYBP chr1 174999163 175011715 + protein_coding KNOWN OTTHUMG00000034941.6 12553 4511 35 ENSG00000139880.18 CDH24 chr14 23047062 23057538 - protein_coding KNOWN OTTHUMG00000028715.7 10477 3748 61 ENSG00000100813.13 ACIN1 chr14 23058564 23095614 - protein_coding KNOWN OTTHUMG00000028716.7 37051 9110 189 ENSG00000179933.5 C14orf119 chr14 23094765 23100462 + protein_coding KNOWN OTTHUMG00000028717.4 5698 3676 4 ENSG00000092067.5 CEBPE chr14 23117304 23119616 - protein_coding KNOWN OTTHUMG00000028719.2 2313 1554 2 ENSG00000092068.17 SLC7A8 chr14 23125295 23183674 - protein_coding KNOWN OTTHUMG00000028720.4 58380 5991 113 ENSG00000202229.1 RNU6-1138P chr14 23156309 23156414 - snRNA KNOWN NA 106 106 1 ENSG00000215277.7 RNF212B chr14 23185316 23273477 + protein_coding KNOWN OTTHUMG00000149918.2 88162 2059 67 ENSG00000240131.1 RP11-124D2.1 chr14 23229961 23230116 - processed_pseudogene KNOWN OTTHUMG00000157670.1 156 156 1 ENSG00000252347.1 RNU6-1046P chr14 23259460 23259566 - snRNA KNOWN NA 107 107 1 ENSG00000215271.7 HOMEZ chr14 23272422 23299447 - protein_coding KNOWN OTTHUMG00000172122.5 27026 5534 10 ENSG00000120333.4 MRPS14 chr1 175010789 175023425 - protein_coding KNOWN OTTHUMG00000034878.4 12637 2594 9 ENSG00000270433.1 RP11-124D2.7 chr14 23293852 23295798 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000184412.1 1947 1947 3 ENSG00000235194.7 PPP1R3E chr14 23295643 23302848 - protein_coding KNOWN OTTHUMG00000172116.3 7206 5548 35 ENSG00000129473.8 BCL2L2 chr14 23298790 23311759 + protein_coding KNOWN OTTHUMG00000028738.3 12970 4189 20 ENSG00000258643.4 BCL2L2-PABPN1 chr14 23306835 23325369 + protein_coding KNOWN OTTHUMG00000171498.2 18535 1548 21 ENSG00000100836.9 PABPN1 chr14 23321289 23326185 + protein_coding KNOWN OTTHUMG00000028739.4 4897 3876 38 ENSG00000092096.13 SLC22A17 chr14 23346306 23352912 - protein_coding KNOWN OTTHUMG00000028740.4 6607 4278 61 ENSG00000100842.11 EFS chr14 23356402 23365752 - protein_coding KNOWN OTTHUMG00000028741.2 9351 3237 17 ENSG00000259018.1 RP11-124D2.3 chr14 23356406 23357003 + antisense NOVEL OTTHUMG00000171499.1 598 285 2 ENSG00000166090.8 IL25 chr14 23372809 23376403 + protein_coding KNOWN OTTHUMG00000028749.2 3595 1367 5 ENSG00000166091.18 CMTM5 chr14 23376808 23379772 + protein_coding KNOWN OTTHUMG00000028751.5 2965 2875 33 ENSG00000206659.1 Y_RNA chr1 175022479 175022580 - misc_RNA NOVEL NA 102 102 1 ENSG00000197616.10 MYH6 chr14 23381990 23408277 - protein_coding KNOWN OTTHUMG00000028753.4 26288 6493 90 ENSG00000199157.1 MIR208A chr14 23388590 23388672 - miRNA KNOWN NA 83 83 1 ENSG00000092054.12 MYH7 chr14 23412738 23435718 - protein_coding KNOWN OTTHUMG00000028755.4 22981 6087 40 ENSG00000258444.1 CTD-2201G16.1 chr14 23415339 23415686 + antisense NOVEL OTTHUMG00000171500.1 348 207 2 ENSG00000215991.1 MIR208B chr14 23417987 23418063 - miRNA KNOWN NA 77 77 1 ENSG00000129460.14 NGDN chr14 23469688 23509862 + protein_coding KNOWN OTTHUMG00000171501.4 40175 4654 71 ENSG00000157306.13 RP11-66N24.4 chr14 23511760 23560778 + processed_transcript NOVEL OTTHUMG00000187908.1 49019 5097 16 ENSG00000136367.13 ZFHX2 chr14 23520855 23556192 - protein_coding KNOWN OTTHUMG00000156894.5 35338 10128 22 ENSG00000273618.1 RP11-66N24.7 chr14 23530682 23532367 + antisense NOVEL OTTHUMG00000187059.1 1686 1686 1 ENSG00000259431.4 THTPA chr14 23555988 23560271 + protein_coding KNOWN OTTHUMG00000172558.1 4284 2894 19 ENSG00000181101.7 SDCCAG3P2 chr1 175044626 175045648 - processed_pseudogene KNOWN OTTHUMG00000034951.1 1023 1023 1 ENSG00000213983.10 AP1G2 chr14 23559565 23568070 - protein_coding KNOWN OTTHUMG00000028760.12 8506 6897 230 ENSG00000258727.1 RP11-66N24.3 chr14 23561097 23568073 + antisense NOVEL OTTHUMG00000171522.1 6977 3243 4 ENSG00000092051.15 JPH4 chr14 23568035 23578800 - protein_coding KNOWN OTTHUMG00000028769.3 10766 5307 26 ENSG00000274002.1 RP11-66N24.6 chr14 23619201 23620012 + lincRNA NOVEL OTTHUMG00000187061.1 812 812 1 ENSG00000100867.13 DHRS2 chr14 23630115 23645639 + protein_coding KNOWN OTTHUMG00000028771.4 15525 7556 68 ENSG00000258464.1 RP11-388E23.2 chr14 23729038 23729741 - processed_transcript NOVEL OTTHUMG00000170673.1 704 704 3 ENSG00000259043.1 BRD7P1 chr14 23749236 23751150 + processed_pseudogene KNOWN OTTHUMG00000170674.1 1915 1915 1 ENSG00000270618.1 RP11-388E23.4 chr14 23767662 23768998 + unprocessed_pseudogene KNOWN OTTHUMG00000184439.1 1337 1013 2 ENSG00000222931.1 RN7SKP205 chr14 23791930 23792236 + misc_RNA KNOWN NA 307 307 1 ENSG00000258887.2 RP11-388E23.3 chr14 23825636 23827396 - unprocessed_pseudogene KNOWN OTTHUMG00000171339.2 1761 329 3 ENSG00000120332.14 TNN chr1 175067858 175148066 + protein_coding KNOWN OTTHUMG00000034882.1 80209 5008 52 ENSG00000259334.1 LINC00596 chr14 23922247 23934568 - lincRNA KNOWN OTTHUMG00000171723.3 12322 937 3 ENSG00000215256.3 DHRS4-AS1 chr14 23938731 23988839 - antisense KNOWN OTTHUMG00000171901.1 50109 3593 13 ENSG00000157326.17 DHRS4 chr14 23953586 23969279 + protein_coding KNOWN OTTHUMG00000028777.5 15694 2305 44 ENSG00000187630.13 DHRS4L2 chr14 23969874 24006408 + protein_coding KNOWN OTTHUMG00000028778.5 36535 2516 77 ENSG00000225766.7 DHRS4L1 chr14 24036453 24051028 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000172193.2 14576 1373 26 ENSG00000186648.13 LRRC16B chr14 24052000 24069728 + protein_coding KNOWN OTTHUMG00000172023.1 17729 6665 78 ENSG00000100884.8 CPNE6 chr14 24070837 24078100 + protein_coding KNOWN OTTHUMG00000028781.6 7264 5996 137 ENSG00000129535.11 NRL chr14 24080107 24115014 - protein_coding KNOWN OTTHUMG00000028789.3 34908 3113 17 ENSG00000100889.10 PCK2 chr14 24094053 24110598 + protein_coding KNOWN OTTHUMG00000028791.8 16546 4189 100 ENSG00000100897.16 DCAF11 chr14 24114195 24125242 + protein_coding KNOWN OTTHUMG00000028793.7 11048 6350 240 ENSG00000235750.8 KIAA0040 chr1 175156987 175192999 - protein_coding KNOWN OTTHUMG00000034880.5 36013 4783 23 ENSG00000259371.2 RP11-468E2.6 chr14 24120956 24131829 + protein_coding PUTATIVE OTTHUMG00000172021.2 10874 850 4 ENSG00000139914.6 FITM1 chr14 24131275 24132849 + protein_coding KNOWN OTTHUMG00000133476.2 1575 1355 3 ENSG00000092010.13 PSME1 chr14 24136158 24138967 + protein_coding KNOWN OTTHUMG00000028795.3 2810 1781 82 ENSG00000100908.12 EMC9 chr14 24138959 24141588 - protein_coding KNOWN OTTHUMG00000028796.5 2630 1588 28 ENSG00000259321.1 RP11-468E2.5 chr14 24139445 24140444 + lincRNA NOVEL OTTHUMG00000171965.1 1000 747 2 ENSG00000100911.12 PSME2 chr14 24143362 24147570 - protein_coding KNOWN OTTHUMG00000028797.5 4209 3582 110 ENSG00000276511.1 MIR7703 chr14 24143489 24143565 - miRNA KNOWN NA 77 77 1 ENSG00000092098.15 RNF31 chr14 24146683 24160661 + protein_coding KNOWN OTTHUMG00000028798.5 13979 4982 188 ENSG00000259529.1 RP11-468E2.4 chr14 24151218 24167402 + protein_coding NOVEL OTTHUMG00000171951.1 16185 4798 21 ENSG00000199804.1 RNA5SP383 chr14 24158603 24158722 + rRNA KNOWN NA 120 120 1 ENSG00000230687.1 RP5-1114G22.2 chr1 175203228 175204849 - lincRNA NOVEL OTTHUMG00000034947.1 1622 775 2 ENSG00000213928.7 IRF9 chr14 24161053 24166565 + protein_coding KNOWN OTTHUMG00000028799.3 5513 3794 73 ENSG00000100918.11 REC8 chr14 24171853 24180257 + protein_coding KNOWN OTTHUMG00000171916.6 8405 3844 100 ENSG00000196497.14 IPO4 chr14 24180219 24188964 - protein_coding KNOWN OTTHUMG00000028801.6 8746 5007 295 ENSG00000259522.2 RP11-468E2.2 chr14 24180395 24190416 - protein_coding NOVEL OTTHUMG00000170680.2 10022 4351 36 ENSG00000100926.13 TM9SF1 chr14 24189143 24195687 - protein_coding KNOWN OTTHUMG00000029322.6 6545 3536 49 ENSG00000254692.1 RP11-468E2.1 chr14 24189157 24213473 - protein_coding PUTATIVE OTTHUMG00000167035.1 24317 2740 10 ENSG00000276698.1 RP11-468E2.10 chr14 24198433 24199090 + lincRNA NOVEL OTTHUMG00000187063.1 658 658 1 ENSG00000278784.1 RP11-468E2.11 chr14 24201612 24202811 - sense_intronic NOVEL OTTHUMG00000187065.1 1200 1200 1 ENSG00000139908.13 TSSK4 chr14 24205697 24208362 + protein_coding KNOWN OTTHUMG00000029323.5 2666 1924 22 ENSG00000254505.7 CHMP4A chr14 24209583 24213869 - protein_coding KNOWN OTTHUMG00000167036.10 4287 2413 56 ENSG00000233946.2 RP5-1114G22.1 chr1 175297080 175297240 + processed_pseudogene KNOWN OTTHUMG00000034881.2 161 161 1 ENSG00000260669.2 AL136419.6 chr14 24209646 24215987 - processed_transcript NOVEL OTTHUMG00000029324.4 6342 3045 14 ENSG00000213920.7 MDP1 chr14 24213937 24216070 - protein_coding KNOWN OTTHUMG00000133477.4 2134 1072 39 ENSG00000255526.5 NEDD8-MDP1 chr14 24213955 24232352 - protein_coding KNOWN OTTHUMG00000167107.2 18398 1051 30 ENSG00000129559.11 NEDD8 chr14 24216852 24232454 - protein_coding KNOWN OTTHUMG00000029325.5 15603 3879 28 ENSG00000100938.16 GMPR2 chr14 24232422 24239242 + protein_coding KNOWN OTTHUMG00000171912.7 6821 3640 199 ENSG00000092330.14 TINF2 chr14 24239643 24242674 - protein_coding KNOWN OTTHUMG00000171849.3 3032 2712 63 ENSG00000092295.10 TGM1 chr14 24249114 24264432 - protein_coding KNOWN OTTHUMG00000029329.6 15319 3735 47 ENSG00000100949.13 RABGGTA chr14 24265538 24271739 - protein_coding KNOWN OTTHUMG00000171838.7 6202 3545 184 ENSG00000157379.12 DHRS1 chr14 24290598 24299833 - protein_coding KNOWN OTTHUMG00000029333.4 9236 5002 55 ENSG00000196943.11 NOP9 chr14 24299862 24309124 + protein_coding KNOWN OTTHUMG00000029342.3 9263 6033 24 ENSG00000260990.1 RP3-518E13.2 chr1 175307218 175335459 + antisense NOVEL OTTHUMG00000034877.1 28242 847 5 ENSG00000136305.10 CIDEB chr14 24305096 24311430 - protein_coding KNOWN OTTHUMG00000171555.3 6335 3198 26 ENSG00000213906.8 LTB4R2 chr14 24305734 24312053 + protein_coding KNOWN OTTHUMG00000186500.1 6320 3233 10 ENSG00000213903.7 LTB4R chr14 24311450 24318036 + protein_coding KNOWN OTTHUMG00000029346.4 6587 4465 10 ENSG00000129467.12 ADCY4 chr14 24318349 24335093 - protein_coding KNOWN OTTHUMG00000029347.7 16745 8067 196 ENSG00000258973.1 RP11-934B9.3 chr14 24332310 24337382 - protein_coding PUTATIVE OTTHUMG00000171754.1 5073 930 4 ENSG00000129465.14 RIPK3 chr14 24336021 24340045 - protein_coding KNOWN OTTHUMG00000029349.4 4025 3256 32 ENSG00000100968.12 NFATC4 chr14 24365673 24379604 + protein_coding KNOWN OTTHUMG00000029351.11 13932 8437 256 ENSG00000205978.5 NYNRIN chr14 24398786 24419288 + protein_coding KNOWN OTTHUMG00000171314.2 20503 7955 13 ENSG00000139899.9 CBLN3 chr14 24426532 24430954 - protein_coding KNOWN OTTHUMG00000171315.1 4423 2562 6 ENSG00000100441.8 KHNYN chr14 24429286 24441834 + protein_coding KNOWN OTTHUMG00000171312.3 12549 8015 34 ENSG00000116147.15 TNR chr1 175315194 175743770 - protein_coding KNOWN OTTHUMG00000034876.5 428577 12960 51 ENSG00000100445.15 SDR39U1 chr14 24439766 24442905 - protein_coding KNOWN OTTHUMG00000171316.5 3140 3099 85 ENSG00000258744.1 RP11-80A15.1 chr14 24501594 24508688 + antisense NOVEL OTTHUMG00000171289.1 7095 698 2 ENSG00000092009.9 CMA1 chr14 24505353 24508265 - protein_coding KNOWN OTTHUMG00000140181.2 2913 937 9 ENSG00000100448.3 CTSG chr14 24573522 24576260 - protein_coding KNOWN OTTHUMG00000140182.2 2739 1374 9 ENSG00000258657.4 RP11-104E19.1 chr14 24595723 24657774 + antisense NOVEL OTTHUMG00000171335.1 62052 947 7 ENSG00000100450.11 GZMH chr14 24606480 24609699 - protein_coding KNOWN OTTHUMG00000140185.3 3220 951 12 ENSG00000100453.11 GZMB chr14 24630954 24634267 - protein_coding KNOWN OTTHUMG00000029369.5 3314 1411 38 ENSG00000168952.14 STXBP6 chr14 24809656 25050297 - protein_coding KNOWN OTTHUMG00000140186.3 240642 8067 42 ENSG00000281282.1 AL137164.1 chr14 24968813 24969619 + protein_coding NOVEL NA 807 69 2 ENSG00000258098.1 RP11-89K22.1 chr14 25124487 25126998 - lincRNA NOVEL OTTHUMG00000170437.1 2512 285 2 ENSG00000175206.9 NPPA chr1 11845709 11848345 - protein_coding KNOWN OTTHUMG00000002388.2 2637 1120 10 ENSG00000235628.1 TNR-IT1 chr1 175538775 175556818 - sense_intronic NOVEL OTTHUMG00000034946.1 18044 630 2 ENSG00000257179.1 HMGN2P6 chr14 25267064 25267336 - processed_pseudogene KNOWN OTTHUMG00000170312.1 273 273 1 ENSG00000258275.1 OR7K1P chr14 25357764 25358689 + processed_pseudogene KNOWN OTTHUMG00000170313.1 926 926 1 ENSG00000257976.1 RP11-388G3.1 chr14 25431193 25432234 - processed_pseudogene KNOWN OTTHUMG00000170317.1 1042 1042 1 ENSG00000212270.1 SNORD37 chr14 25806648 25806712 - snoRNA NOVEL NA 65 65 1 ENSG00000279521.1 RP11-314P15.1 chr14 25820366 25822741 + TEC KNOWN OTTHUMG00000170314.2 2376 2376 1 ENSG00000257986.1 RP11-314P15.2 chr14 25835858 26143305 - lincRNA NOVEL OTTHUMG00000170315.1 307448 529 5 ENSG00000212037.1 AL049831.1 chr14 26172166 26172258 - miRNA NOVEL NA 93 93 1 ENSG00000257503.1 CYB5AP5 chr14 26208036 26208424 + processed_pseudogene KNOWN OTTHUMG00000170316.1 389 389 1 ENSG00000139910.18 NOVA1 chr14 26443093 26597754 - protein_coding KNOWN OTTHUMG00000029385.7 154662 10046 54 ENSG00000262119.1 RP11-483C6.1 chr14 26592747 26594517 - sense_intronic NOVEL OTTHUMG00000170320.1 1771 1771 1 ENSG00000224718.1 RP11-222A5.1 chr1 175877343 175880468 + lincRNA NOVEL OTTHUMG00000034949.2 3126 1809 3 ENSG00000257842.4 NOVA1-AS1 chr14 26598412 26806467 + antisense NOVEL OTTHUMG00000170389.2 208056 1483 16 ENSG00000257845.1 RP11-626P14.1 chr14 26775495 26822107 - lincRNA NOVEL OTTHUMG00000170331.2 46613 497 4 ENSG00000257185.1 RP11-626P14.2 chr14 26809417 26836458 + lincRNA NOVEL OTTHUMG00000170416.1 27042 853 8 ENSG00000258081.3 RP11-384J4.2 chr14 26836728 27160420 + lincRNA NOVEL OTTHUMG00000170435.2 323693 919 9 ENSG00000257612.1 RP11-384J4.1 chr14 26873133 26914743 + lincRNA NOVEL OTTHUMG00000170436.1 41611 932 6 ENSG00000265165.1 MIR4307 chr14 26908642 26908725 + miRNA KNOWN NA 84 84 1 ENSG00000222899.1 AL110292.1 chr14 26927653 26927775 + miRNA NOVEL NA 123 123 1 ENSG00000258932.4 CTD-3006G17.2 chr14 27258717 27845286 - transcribed_processed_pseudogene KNOWN OTTHUMG00000170579.1 586570 1666 17 ENSG00000258548.4 LINC00645 chr14 27612588 27639636 + lincRNA NOVEL OTTHUMG00000170580.2 27049 3654 11 ENSG00000264657.1 MIR3171 chr14 27633205 27633278 - miRNA KNOWN NA 74 74 1 ENSG00000227740.1 RP11-318C24.2 chr1 175904762 175920513 - lincRNA NOVEL OTTHUMG00000034985.1 15752 657 3 ENSG00000223164.1 AL445384.1 chr14 27990005 27990115 + miRNA NOVEL NA 111 111 1 ENSG00000197358.9 BNIP3P1 chr14 28264390 28265974 + transcribed_processed_pseudogene KNOWN OTTHUMG00000170378.2 1585 1585 2 ENSG00000257869.1 CTD-2591A6.2 chr14 28318141 28418612 + lincRNA NOVEL OTTHUMG00000170385.1 100472 508 3 ENSG00000240179.1 RPL26P3 chr14 28489910 28490362 + processed_pseudogene KNOWN OTTHUMG00000157685.1 453 453 1 ENSG00000258175.1 RP11-412H8.2 chr14 28592223 28613623 - lincRNA NOVEL OTTHUMG00000170383.1 21401 665 3 ENSG00000257662.1 EIF4A1P12 chr14 28593779 28593919 + processed_pseudogene KNOWN OTTHUMG00000170384.1 141 141 1 ENSG00000258282.2 BTF3P2 chr14 28673241 28673727 - processed_pseudogene KNOWN OTTHUMG00000170386.2 487 487 1 ENSG00000257126.4 FOXG1-AS1 chr14 28729083 28765277 - antisense NOVEL OTTHUMG00000170343.1 36195 874 14 ENSG00000176165.9 FOXG1 chr14 28765388 28770277 + protein_coding KNOWN OTTHUMG00000140187.5 4890 4890 1 ENSG00000186960.9 LINC01551 chr14 28772704 28813453 + lincRNA KNOWN OTTHUMG00000029410.6 40750 2772 13 ENSG00000230777.1 RP11-318C24.1 chr1 175921975 175922145 + processed_pseudogene KNOWN OTTHUMG00000034948.1 171 171 1 ENSG00000257056.2 RP11-966I7.2 chr14 28783491 28785787 - lincRNA NOVEL OTTHUMG00000170346.1 2297 1655 2 ENSG00000257748.1 RP11-966I7.3 chr14 28800084 28830204 - lincRNA NOVEL OTTHUMG00000170360.1 30121 375 4 ENSG00000274762.1 RP11-966I7.4 chr14 28818741 28819258 + antisense NOVEL OTTHUMG00000186807.1 518 518 1 ENSG00000258038.4 CTD-2384A14.1 chr14 28830244 28968400 + lincRNA NOVEL OTTHUMG00000170368.1 138157 1986 25 ENSG00000258065.1 RP11-30H9.1 chr14 28857384 28858701 - processed_pseudogene KNOWN OTTHUMG00000170369.1 1318 1318 1 ENSG00000207164.1 Y_RNA chr14 28901236 28901347 - misc_RNA NOVEL NA 112 112 1 ENSG00000258028.1 RP11-148E17.1 chr14 28936889 29028763 + lincRNA NOVEL OTTHUMG00000170370.1 91875 741 6 ENSG00000257523.1 CTD-2384A14.2 chr14 28975836 28978924 - lincRNA NOVEL OTTHUMG00000170371.1 3089 540 3 ENSG00000252065.1 RNU6-864P chr14 28982303 28982410 - snRNA KNOWN NA 108 108 1 ENSG00000281812.1 AL135878.1 chr14 29059754 29059848 - miRNA NOVEL NA 95 95 1 ENSG00000143207.18 RFWD2 chr1 175944831 176207493 - protein_coding KNOWN OTTHUMG00000034986.3 262663 4299 120 ENSG00000257522.4 RP11-562L8.1 chr14 29264381 29381295 - processed_transcript NOVEL OTTHUMG00000170373.2 116915 1775 26 ENSG00000258107.1 RP11-260G13.1 chr14 29390346 29436412 + lincRNA NOVEL OTTHUMG00000170374.1 46067 647 4 ENSG00000212518.1 RNU11-5P chr14 29476784 29476912 + snRNA KNOWN NA 129 129 1 ENSG00000184304.13 PRKD1 chr14 29576479 30191898 - protein_coding KNOWN OTTHUMG00000140203.4 615420 5187 82 ENSG00000257120.1 CTD-2503I6.1 chr14 29652809 29657916 + antisense NOVEL OTTHUMG00000170489.1 5108 551 2 ENSG00000264797.1 AL356756.1 chr14 29705299 29705402 - miRNA NOVEL NA 104 104 1 ENSG00000252686.1 RNU6-1234P chr14 29811916 29812018 + snRNA KNOWN NA 103 103 1 ENSG00000257904.1 RP11-269C4.2 chr14 29940745 29980212 + antisense NOVEL OTTHUMG00000170490.1 39468 821 5 ENSG00000248975.2 CTD-2251F13.1 chr14 29952397 30297043 - lincRNA NOVEL OTTHUMG00000170491.1 344647 1774 9 ENSG00000240201.1 RP11-269C4.1 chr14 30055210 30055954 + processed_pseudogene KNOWN OTTHUMG00000157690.2 745 745 1 ENSG00000281096.1 AL590723.1 chr1 175968385 175968477 - miRNA NOVEL NA 93 93 1 ENSG00000279032.1 RP11-306B9.1 chr14 30370108 30373115 + TEC KNOWN OTTHUMG00000172920.1 3008 3008 1 ENSG00000257636.5 RP11-1103G16.1 chr14 30437992 30573629 - antisense NOVEL OTTHUMG00000170510.2 135638 1669 16 ENSG00000278587.1 uc_338 chr14 30519161 30519318 + misc_RNA NOVEL NA 158 158 1 ENSG00000258350.1 SYF2P1 chr14 30541776 30542188 - processed_pseudogene KNOWN OTTHUMG00000170511.1 413 413 1 ENSG00000092140.13 G2E3 chr14 30559123 30620063 + protein_coding KNOWN OTTHUMG00000140204.3 60941 9237 101 ENSG00000092108.19 SCFD1 chr14 30622112 30735812 + protein_coding KNOWN OTTHUMG00000029420.4 113701 6571 267 ENSG00000258648.1 UBE2CP1 chr14 30683045 30683598 - processed_pseudogene KNOWN OTTHUMG00000170581.1 554 554 1 ENSG00000258558.1 RP11-159L20.2 chr14 30734926 30822702 - antisense NOVEL OTTHUMG00000170582.1 87777 430 3 ENSG00000243855.1 RP11-114O13.1 chr14 30791098 30791489 + processed_pseudogene KNOWN OTTHUMG00000157709.2 392 392 1 ENSG00000240513.1 RP11-829H16.1 chr14 30819714 30819914 + processed_pseudogene KNOWN OTTHUMG00000158035.1 201 201 1 ENSG00000252906.1 SCARNA3 chr1 175968398 175968540 - scaRNA KNOWN NA 143 143 1 ENSG00000213867.4 RP11-829H16.2 chr14 30821419 30821843 + processed_pseudogene KNOWN OTTHUMG00000158034.1 425 425 1 ENSG00000100473.14 COCH chr14 30874514 30895065 + protein_coding KNOWN OTTHUMG00000029432.4 20552 3621 81 ENSG00000258525.1 RP11-829H16.3 chr14 30876179 30889808 - antisense NOVEL OTTHUMG00000170583.1 13630 2302 13 ENSG00000196792.10 STRN3 chr14 30893799 31026401 - protein_coding KNOWN OTTHUMG00000140201.3 132603 4965 68 ENSG00000258886.2 HIGD1AP17 chr14 30964347 30964622 + processed_pseudogene KNOWN OTTHUMG00000170584.2 276 276 1 ENSG00000207952.1 MIR624 chr14 31014646 31014742 - miRNA KNOWN NA 97 97 1 ENSG00000258968.2 RP11-829H16.5 chr14 31018446 31018796 + processed_pseudogene KNOWN OTTHUMG00000170585.2 351 351 1 ENSG00000100478.13 AP4S1 chr14 31025106 31096450 + protein_coding KNOWN OTTHUMG00000140202.3 71345 7223 63 ENSG00000092148.11 HECTD1 chr14 31100112 31207804 - protein_coding KNOWN OTTHUMG00000170670.3 107693 12557 241 ENSG00000258640.3 RPL21P5 chr14 31111569 31112239 - processed_pseudogene KNOWN OTTHUMG00000170671.3 671 472 2 ENSG00000228686.2 RP11-492I21.1 chr1 176017277 176018760 + antisense NOVEL OTTHUMG00000034984.2 1484 629 2 ENSG00000207440.1 RNU6-541P chr14 31142939 31143048 + snRNA KNOWN NA 110 110 1 ENSG00000202402.1 Y_RNA chr14 31244761 31244861 + misc_RNA NOVEL NA 101 101 1 ENSG00000257831.1 RP11-596D21.1 chr14 31248628 31302739 + antisense NOVEL OTTHUMG00000170516.1 54112 975 6 ENSG00000199291.1 Y_RNA chr14 31258608 31258709 - misc_RNA NOVEL NA 102 102 1 ENSG00000129493.13 HEATR5A chr14 31291791 31420582 - protein_coding KNOWN OTTHUMG00000169043.3 128792 10243 99 ENSG00000203546.6 RP11-176H8.1 chr14 31334312 31457441 - protein_coding NOVEL OTTHUMG00000169042.3 123130 4422 33 ENSG00000250365.5 CTD-2213F21.2 chr14 31420286 31452883 + antisense NOVEL OTTHUMG00000170517.1 32598 1791 10 ENSG00000129480.11 DTD2 chr14 31446036 31457510 - protein_coding KNOWN OTTHUMG00000140205.2 11475 2971 11 ENSG00000239323.1 CTD-2213F21.1 chr14 31462795 31463371 - processed_pseudogene KNOWN OTTHUMG00000157725.1 577 577 1 ENSG00000214943.3 GPR33 chr14 31482964 31487945 - protein_coding KNOWN OTTHUMG00000154921.3 4982 1057 2 ENSG00000236021.1 RP11-195C7.1 chr1 176207648 176229330 + antisense NOVEL OTTHUMG00000034988.1 21683 579 3 ENSG00000151413.15 NUBPL chr14 31489956 31861224 + protein_coding KNOWN OTTHUMG00000170521.2 371269 7590 83 ENSG00000258196.1 CTD-2213F21.4 chr14 31553358 31558498 - antisense NOVEL OTTHUMG00000170532.1 5141 430 3 ENSG00000257155.1 CTD-2213F21.3 chr14 31558507 31561334 - antisense NOVEL OTTHUMG00000170533.1 2828 288 2 ENSG00000223087.2 RNU6-602P chr14 31662039 31662143 - snRNA KNOWN NA 105 105 1 ENSG00000207412.1 RNU6-455P chr14 31686692 31686798 - snRNA KNOWN NA 107 107 1 ENSG00000257472.1 RP11-159D23.2 chr14 31925801 31930146 - lincRNA NOVEL OTTHUMG00000170534.1 4346 1236 2 ENSG00000258474.1 RP11-187E13.1 chr14 31944853 31950382 + lincRNA NOVEL OTTHUMG00000170586.1 5530 550 2 ENSG00000275002.1 RP11-187E13.3 chr14 31964550 31965095 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000187834.1 546 546 2 ENSG00000258386.1 RP11-187E13.2 chr14 32006902 32018685 + lincRNA NOVEL OTTHUMG00000170587.1 11784 276 2 ENSG00000258655.2 ARHGAP5-AS1 chr14 32074946 32076793 - antisense NOVEL OTTHUMG00000170588.2 1848 1848 1 ENSG00000273629.1 U7 chr1 176217541 176217602 + snRNA NOVEL NA 62 62 1 ENSG00000100852.11 ARHGAP5 chr14 32076114 32159728 + protein_coding KNOWN OTTHUMG00000170589.2 83615 10888 60 ENSG00000201654.1 RNU6-7 chr14 32202045 32202151 + snRNA KNOWN NA 107 107 1 ENSG00000202337.1 RNU6-8 chr14 32203163 32203269 - snRNA KNOWN NA 107 107 1 ENSG00000258619.2 RP11-134E15.1 chr14 32241524 32243093 - processed_pseudogene KNOWN OTTHUMG00000170590.2 1570 1570 1 ENSG00000259086.3 RP11-134E15.2 chr14 32271857 32272301 - processed_pseudogene KNOWN OTTHUMG00000170591.2 445 445 1 ENSG00000151320.9 AKAP6 chr14 32329273 32837681 + protein_coding KNOWN OTTHUMG00000140207.3 508409 19748 77 ENSG00000258580.1 RP11-320M16.2 chr14 32373337 32417974 - antisense NOVEL OTTHUMG00000170592.1 44638 928 6 ENSG00000278746.1 Metazoa_SRP chr14 32442341 32442639 + misc_RNA NOVEL NA 299 299 1 ENSG00000259045.1 RP11-320M16.1 chr14 32484098 32484800 - unprocessed_pseudogene KNOWN OTTHUMG00000170593.1 703 703 1 ENSG00000277394.1 AL132988.1 chr14 32484915 32484991 - miRNA NOVEL NA 77 77 1 ENSG00000275915.1 NPPA-AS1_3 chr1 11847442 11847549 + misc_RNA NOVEL NA 108 108 1 ENSG00000232463.1 RP11-195C7.2 chr1 176231200 176231830 - processed_pseudogene KNOWN OTTHUMG00000034990.1 631 631 1 ENSG00000280281.1 RP11-340L3.1 chr14 32879246 32882830 + TEC KNOWN OTTHUMG00000172921.1 3585 3585 1 ENSG00000151322.17 NPAS3 chr14 32934933 33804176 + protein_coding KNOWN OTTHUMG00000140215.3 869244 9241 98 ENSG00000276444.1 AL139296.1 chr14 33200164 33200260 - miRNA NOVEL NA 97 97 1 ENSG00000129521.12 EGLN3 chr14 33924231 34462774 - protein_coding KNOWN OTTHUMG00000029498.9 538544 7359 44 ENSG00000265244.1 AL358340.1 chr14 33977310 33977391 - miRNA NOVEL NA 82 82 1 ENSG00000258897.1 EGLN3-AS1 chr14 34040097 34059300 + antisense NOVEL OTTHUMG00000170577.1 19204 308 3 ENSG00000223593.1 AL356806.3 chr14 34416687 34417602 - processed_pseudogene KNOWN OTTHUMG00000154922.1 916 916 1 ENSG00000165389.6 SPTSSA chr14 34432789 34462356 - protein_coding KNOWN OTTHUMG00000140212.2 29568 2777 2 ENSG00000237450.5 RP11-671J11.1 chr14 34485979 34486447 + processed_pseudogene KNOWN OTTHUMG00000157728.2 469 469 1 ENSG00000129518.7 EAPP chr14 34515929 34539711 - protein_coding KNOWN OTTHUMG00000170621.2 23783 2030 27 ENSG00000253025.1 RNU2-12P chr1 176243862 176244029 - snRNA KNOWN NA 168 168 1 ENSG00000279423.1 RP11-671J11.5 chr14 34541044 34541714 + TEC KNOWN OTTHUMG00000171337.1 671 671 1 ENSG00000259002.2 RP11-671J11.7 chr14 34541740 34546329 - lincRNA NOVEL OTTHUMG00000171338.2 4590 1324 5 ENSG00000206596.1 RNU1-27P chr14 34546714 34546877 + snRNA KNOWN NA 164 164 1 ENSG00000206588.1 RNU1-28P chr14 34556226 34556389 - snRNA KNOWN NA 164 164 1 ENSG00000259135.1 RP11-671J11.4 chr14 34556774 34561298 + antisense NOVEL OTTHUMG00000170622.2 4525 1137 5 ENSG00000129515.17 SNX6 chr14 34561094 34630183 - protein_coding KNOWN OTTHUMG00000140213.4 69090 4105 90 ENSG00000240463.1 RPS19P3 chr14 34568689 34569129 - processed_pseudogene KNOWN OTTHUMG00000157732.1 441 441 1 ENSG00000275978.1 Metazoa_SRP chr14 34659564 34659878 - misc_RNA NOVEL NA 315 315 1 ENSG00000253003.1 RNU6-1261P chr14 34675891 34675994 + snRNA KNOWN NA 104 104 1 ENSG00000241582.1 RP11-434O22.2 chr14 34694170 34694644 + processed_pseudogene KNOWN OTTHUMG00000158037.1 475 475 1 ENSG00000227815.2 RP11-195C7.3 chr1 176272483 176273402 + unprocessed_pseudogene KNOWN OTTHUMG00000034991.2 920 795 3 ENSG00000165410.13 CFL2 chr14 34706769 34714823 - protein_coding KNOWN OTTHUMG00000029536.8 8055 7179 24 ENSG00000243824.1 RP11-434O22.1 chr14 34740336 34740833 - processed_pseudogene KNOWN OTTHUMG00000158031.1 498 498 1 ENSG00000198604.9 BAZ1A chr14 34752731 34875647 - protein_coding KNOWN OTTHUMG00000140216.5 122917 7698 107 ENSG00000263691.1 AL355885.1 chr14 34801531 34801585 - miRNA NOVEL NA 55 55 1 ENSG00000251726.1 RNU7-41P chr14 34845300 34845360 - snRNA KNOWN NA 61 61 1 ENSG00000258738.1 RP11-73E17.2 chr14 34874343 34876459 + antisense NOVEL OTTHUMG00000170792.1 2117 2117 1 ENSG00000258704.4 SRP54-AS1 chr14 34920858 34982532 - processed_transcript NOVEL OTTHUMG00000170821.3 61675 1409 18 ENSG00000258493.2 RP11-73E17.3 chr14 34920865 34921006 + processed_pseudogene KNOWN OTTHUMG00000170794.2 142 142 1 ENSG00000226677.3 IGBP1P1 chr14 34939324 34940332 + processed_pseudogene KNOWN OTTHUMG00000170820.1 1009 1009 1 ENSG00000100883.10 SRP54 chr14 34981957 35029567 + protein_coding KNOWN OTTHUMG00000140214.3 47611 3903 98 ENSG00000231020.1 RP11-357J22.1 chr1 176305672 176306095 - processed_pseudogene KNOWN OTTHUMG00000034987.1 424 424 1 ENSG00000151327.11 FAM177A1 chr14 35044907 35113130 + protein_coding KNOWN OTTHUMG00000140217.6 68224 8385 47 ENSG00000092020.9 PPP2R3C chr14 35085467 35122517 - protein_coding KNOWN OTTHUMG00000140224.5 37051 3863 137 ENSG00000279434.1 RP11-85K15.3 chr14 35086035 35088059 + TEC KNOWN OTTHUMG00000170879.1 2025 2025 1 ENSG00000100890.14 KIAA0391 chr14 35121846 35277614 + protein_coding KNOWN OTTHUMG00000170997.6 155769 6982 58 ENSG00000258790.1 KIAA0391 chr14 35122549 35317474 + protein_coding NOVEL OTTHUMG00000171025.1 194926 3857 15 ENSG00000241052.1 RP11-173D9.1 chr14 35144021 35144480 - processed_pseudogene KNOWN OTTHUMG00000157752.1 460 460 1 ENSG00000259090.1 RP11-173D9.5 chr14 35157904 35159099 - processed_pseudogene KNOWN OTTHUMG00000171026.1 1196 1196 1 ENSG00000256243.2 RPL7AP3 chr14 35235180 35235651 - processed_pseudogene KNOWN OTTHUMG00000171027.1 472 472 1 ENSG00000240392.1 RPL9P3 chr14 35262462 35263036 + processed_pseudogene KNOWN OTTHUMG00000157758.1 575 575 1 ENSG00000100902.9 PSMA6 chr14 35278633 35317493 + protein_coding KNOWN OTTHUMG00000140221.3 38861 6506 84 ENSG00000225904.1 MORF4L1P7 chr1 176367699 176368401 - processed_pseudogene KNOWN OTTHUMG00000034989.1 703 703 1 ENSG00000265530.1 AL121594.1 chr14 35291486 35291576 + miRNA NOVEL NA 91 91 1 ENSG00000258860.1 RP11-561B11.3 chr14 35362232 35363628 - lincRNA NOVEL OTTHUMG00000171062.1 1397 624 2 ENSG00000240023.1 RP11-561B11.1 chr14 35388121 35389069 - processed_pseudogene KNOWN OTTHUMG00000157762.1 949 949 1 ENSG00000100906.9 NFKBIA chr14 35401511 35404749 - protein_coding KNOWN OTTHUMG00000140220.3 3239 2373 40 ENSG00000259022.2 DNAJC8P1 chr14 35430260 35430631 + processed_pseudogene KNOWN OTTHUMG00000171063.2 372 372 1 ENSG00000259017.1 RP11-561B11.6 chr14 35447003 35447625 - lincRNA NOVEL OTTHUMG00000171064.1 623 504 2 ENSG00000259105.1 RPS3AP4 chr14 35468272 35469330 + processed_pseudogene KNOWN OTTHUMG00000171065.1 1059 764 2 ENSG00000258783.1 KRT18P6 chr14 35511825 35513089 - processed_pseudogene KNOWN OTTHUMG00000171008.1 1265 1265 1 ENSG00000168348.3 INSM2 chr14 35534042 35537054 + protein_coding KNOWN OTTHUMG00000140223.1 3013 3013 1 ENSG00000174373.14 RALGAPA1 chr14 35538352 35809304 - protein_coding KNOWN OTTHUMG00000170619.5 270953 13265 241 ENSG00000116183.9 PAPPA2 chr1 176463171 176845605 + protein_coding KNOWN OTTHUMG00000035025.4 382435 10930 36 ENSG00000280729.1 AL160231.1 chr14 35576760 35576859 - miRNA NOVEL NA 100 100 1 ENSG00000253059.1 SNORA31 chr14 35756327 35756463 + snoRNA NOVEL NA 137 137 1 ENSG00000257957.1 QRSL1P3 chr14 35765795 35767110 + processed_pseudogene KNOWN OTTHUMG00000170562.1 1316 1316 1 ENSG00000266264.1 AL162311.1 chr14 35809212 35809300 - miRNA NOVEL NA 89 89 1 ENSG00000258938.1 RP11-317N8.5 chr14 35819224 35826765 - antisense NOVEL OTTHUMG00000170615.1 7542 2867 2 ENSG00000258300.2 NUTF2P2 chr14 35819837 35820220 + processed_pseudogene KNOWN OTTHUMG00000170563.2 384 384 1 ENSG00000100916.12 BRMS1L chr14 35826318 35932325 + protein_coding KNOWN OTTHUMG00000170559.3 106008 3897 44 ENSG00000257272.1 RP11-317N8.3 chr14 35873857 35875303 + lincRNA NOVEL OTTHUMG00000170564.1 1447 601 2 ENSG00000257307.1 RP11-317N8.4 chr14 35881001 35881709 + processed_pseudogene KNOWN OTTHUMG00000170565.1 709 709 1 ENSG00000258342.1 RP11-116N8.1 chr14 35897982 36063743 + sense_overlapping NOVEL OTTHUMG00000170566.1 165762 477 4 ENSG00000237514.3 PTP4A1P7 chr1 176616273 176616786 - processed_pseudogene KNOWN OTTHUMG00000035043.1 514 514 1 ENSG00000257614.1 RP11-116N8.2 chr14 35947556 35950044 - lincRNA NOVEL OTTHUMG00000170567.1 2489 549 2 ENSG00000257720.1 ILF2P2 chr14 36054197 36055313 - processed_pseudogene KNOWN OTTHUMG00000170568.1 1117 1117 1 ENSG00000257826.1 RP11-116N8.4 chr14 36061026 36067190 - lincRNA NOVEL OTTHUMG00000170569.1 6165 886 3 ENSG00000257585.1 LINC00609 chr14 36070427 36165288 + lincRNA NOVEL OTTHUMG00000170616.1 94862 583 3 ENSG00000259104.2 PTCSC3 chr14 36136108 36176468 - lincRNA NOVEL OTTHUMG00000170617.2 40361 571 4 ENSG00000212071.1 AL162511.1 chr14 36196480 36196568 - miRNA NOVEL NA 89 89 1 ENSG00000258844.1 RP11-259K15.2 chr14 36214607 36235608 + lincRNA NOVEL OTTHUMG00000170618.1 21002 879 3 ENSG00000252312.1 RN7SKP21 chr14 36231555 36231774 - misc_RNA KNOWN NA 220 220 1 ENSG00000151332.17 MBIP chr14 36298558 36320676 - protein_coding KNOWN OTTHUMG00000140222.4 22119 3468 68 ENSG00000188831.4 DPPA3P2 chr14 36371165 36372383 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000170728.1 1219 1219 2 ENSG00000152092.14 ASTN1 chr1 176857302 177164973 - protein_coding KNOWN OTTHUMG00000035041.2 307672 9201 91 ENSG00000238540.1 RNU7-93P chr14 36405214 36405274 + snRNA KNOWN NA 61 61 1 ENSG00000257520.1 RP11-896J10.3 chr14 36473207 36519521 - processed_transcript NOVEL OTTHUMG00000163888.1 46315 1116 5 ENSG00000229415.8 SFTA3 chr14 36473288 36513829 - protein_coding KNOWN OTTHUMG00000170540.2 40542 3108 38 ENSG00000136352.16 NKX2-1 chr14 36516392 36521149 - protein_coding KNOWN OTTHUMG00000140225.7 4758 3165 15 ENSG00000253563.2 NKX2-1-AS1 chr14 36519278 36523016 + antisense KNOWN OTTHUMG00000163889.2 3739 1775 2 ENSG00000258467.1 PHKBP2 chr14 36533506 36534538 - unprocessed_pseudogene KNOWN OTTHUMG00000170729.1 1033 708 2 ENSG00000243730.2 RPL29P3 chr14 36577543 36578005 - processed_pseudogene KNOWN OTTHUMG00000157774.2 463 463 1 ENSG00000136327.6 NKX2-8 chr14 36580579 36582607 - protein_coding KNOWN OTTHUMG00000028772.6 2029 1261 2 ENSG00000201395.1 RN7SKP257 chr14 36593839 36594147 - misc_RNA KNOWN NA 309 309 1 ENSG00000258661.1 RP11-964E11.2 chr14 36647083 36658801 - antisense NOVEL OTTHUMG00000170732.1 11719 2613 2 ENSG00000202609.3 MIR488 chr1 177029343 177029452 - miRNA KNOWN NA 110 110 1 ENSG00000198807.11 PAX9 chr14 36657568 36679715 + protein_coding KNOWN OTTHUMG00000140251.3 22148 6035 21 ENSG00000183032.9 SLC25A21 chr14 36677921 37172866 - protein_coding KNOWN OTTHUMG00000140250.2 494946 5022 40 ENSG00000258690.1 RP11-81F13.1 chr14 36788644 36807163 + antisense NOVEL OTTHUMG00000170734.1 18520 526 2 ENSG00000258601.1 RP11-81F13.2 chr14 36808871 36828729 + antisense NOVEL OTTHUMG00000170735.1 19859 554 2 ENSG00000266327.1 MIR4503 chr14 36952309 36952391 - miRNA KNOWN NA 83 83 1 ENSG00000258827.2 RP11-537P22.2 chr14 37097062 37098563 - sense_intronic NOVEL OTTHUMG00000170736.2 1502 828 2 ENSG00000258708.1 SLC25A21-AS1 chr14 37171888 37173811 + antisense KNOWN OTTHUMG00000170737.1 1924 1924 1 ENSG00000252746.1 RNU6-273P chr14 37187219 37187314 + snRNA KNOWN NA 96 96 1 ENSG00000151338.17 MIPOL1 chr14 37197913 37552361 + protein_coding KNOWN OTTHUMG00000140252.2 354449 20250 133 ENSG00000207046.1 RNU6-886P chr14 37434469 37434573 - snRNA KNOWN NA 105 105 1 ENSG00000280731.1 AL021398.2 chr1 177111386 177111510 + miRNA NOVEL NA 125 125 1 ENSG00000259087.4 RP11-356O9.2 chr14 37556158 37567095 - lincRNA NOVEL OTTHUMG00000170994.1 10938 532 4 ENSG00000258414.1 RP11-356O9.1 chr14 37564047 37579125 + lincRNA NOVEL OTTHUMG00000170995.2 15079 738 2 ENSG00000129514.5 FOXA1 chr14 37589984 37596059 - protein_coding KNOWN OTTHUMG00000140253.2 6076 3982 11 ENSG00000139865.15 TTC6 chr14 37595847 38041442 + protein_coding KNOWN OTTHUMG00000157369.7 445596 8361 115 ENSG00000200385.1 SNORA42 chr14 37720425 37720561 + snoRNA NOVEL NA 137 137 1 ENSG00000201431.1 RNU6-1277P chr14 37827798 37827904 - snRNA KNOWN NA 107 107 1 ENSG00000259091.1 LINC00517 chr14 37896060 37902372 - antisense NOVEL OTTHUMG00000170594.2 6313 4125 4 ENSG00000258696.1 CTD-2058B24.3 chr14 38003113 38004847 - antisense NOVEL OTTHUMG00000170668.1 1735 364 2 ENSG00000259048.1 CTD-2058B24.2 chr14 38034287 38194281 - antisense NOVEL OTTHUMG00000170669.1 159995 1153 7 ENSG00000258649.1 CTD-2142D14.1 chr14 38190983 38202923 + lincRNA NOVEL OTTHUMG00000170667.1 11941 531 3 ENSG00000120937.8 NPPB chr1 11857464 11858931 - protein_coding KNOWN OTTHUMG00000002389.1 1468 694 3 ENSG00000198797.6 BRINP2 chr1 177171497 177282422 + protein_coding KNOWN OTTHUMG00000034953.2 110926 3953 15 ENSG00000139874.5 SSTR1 chr14 38207999 38213067 + protein_coding KNOWN OTTHUMG00000140249.3 5069 4295 3 ENSG00000176435.6 CLEC14A chr14 38254103 38256369 - protein_coding KNOWN OTTHUMG00000140248.1 2267 2267 1 ENSG00000259072.1 RP11-96D24.1 chr14 38290953 38311930 + lincRNA NOVEL OTTHUMG00000170693.1 20978 1044 4 ENSG00000271468.1 RP11-14N4.1 chr14 38605255 38606098 + processed_pseudogene KNOWN OTTHUMG00000184397.1 844 844 1 ENSG00000258948.2 KRT8P1 chr14 38727275 38728481 + processed_pseudogene KNOWN OTTHUMG00000170692.2 1207 1207 1 ENSG00000259070.4 LINC00639 chr14 38749339 38948273 - lincRNA NOVEL OTTHUMG00000170746.2 198935 4860 26 ENSG00000258680.2 RP11-506K19.1 chr14 38835389 38835788 + processed_pseudogene KNOWN OTTHUMG00000170747.2 400 400 1 ENSG00000270713.1 RP11-506K19.2 chr14 38973399 38974085 - processed_pseudogene KNOWN OTTHUMG00000184390.1 687 687 1 ENSG00000199285.1 Y_RNA chr14 38987281 38987383 + misc_RNA NOVEL NA 103 103 1 ENSG00000100934.13 SEC23A chr14 39031919 39109646 - protein_coding KNOWN OTTHUMG00000028812.4 77728 8945 93 ENSG00000222749.1 AL021398.1 chr1 177186360 177186452 - miRNA NOVEL NA 93 93 1 ENSG00000259121.2 RP11-545M17.2 chr14 39090901 39091101 + processed_pseudogene KNOWN OTTHUMG00000170748.2 201 201 1 ENSG00000258651.1 RP11-545M17.1 chr14 39103140 39103812 + lincRNA NOVEL OTTHUMG00000170749.1 673 500 2 ENSG00000258591.2 RP11-545M17.3 chr14 39108342 39108707 + processed_pseudogene KNOWN OTTHUMG00000170750.3 366 366 1 ENSG00000092208.15 GEMIN2 chr14 39114223 39136973 + protein_coding KNOWN OTTHUMG00000028816.6 22751 2532 83 ENSG00000182400.13 TRAPPC6B chr14 39147811 39170532 - protein_coding KNOWN OTTHUMG00000140259.3 22722 4533 34 ENSG00000241984.2 RPL7AP2 chr14 39156742 39157852 + processed_pseudogene KNOWN OTTHUMG00000158046.3 1111 740 2 ENSG00000259083.1 RP11-407N17.4 chr14 39174885 39175880 - antisense NOVEL OTTHUMG00000170768.1 996 530 2 ENSG00000100941.7 PNN chr14 39175183 39183218 + protein_coding KNOWN OTTHUMG00000028821.5 8036 4201 28 ENSG00000258671.2 RP11-407N17.2 chr14 39211781 39212255 + processed_pseudogene KNOWN OTTHUMG00000170751.2 475 475 1 ENSG00000270503.1 RP11-407N17.6 chr14 39215065 39216335 + processed_pseudogene KNOWN OTTHUMG00000184431.1 1271 1271 1 ENSG00000224968.1 RP1-35C21.1 chr1 177351586 177366272 + lincRNA NOVEL OTTHUMG00000040861.1 14687 491 4 ENSG00000150526.10 MIA2 chr14 39230231 39253655 + protein_coding KNOWN OTTHUMG00000028831.5 23425 2940 18 ENSG00000258941.3 RP11-407N17.3 chr14 39233902 39350423 + protein_coding NOVEL OTTHUMG00000170752.1 116522 4392 28 ENSG00000150527.15 CTAGE5 chr14 39265284 39388513 + protein_coding KNOWN OTTHUMG00000140258.6 123230 7669 237 ENSG00000258940.2 RP11-407N17.5 chr14 39265703 39267061 - antisense NOVEL OTTHUMG00000170769.2 1359 1359 3 ENSG00000271424.1 RP11-647O20.1 chr14 39370279 39370756 - processed_pseudogene KNOWN OTTHUMG00000184531.1 478 478 1 ENSG00000259100.1 RP11-1074O12.1 chr14 39385404 39387102 - processed_pseudogene KNOWN OTTHUMG00000170675.1 1699 1699 1 ENSG00000165355.7 FBXO33 chr14 39397669 39432500 - protein_coding KNOWN OTTHUMG00000140257.3 34832 3853 8 ENSG00000258526.4 RP11-111A21.1 chr14 39474840 39513780 + lincRNA NOVEL OTTHUMG00000170672.1 38941 1209 9 ENSG00000258418.1 RP11-662J14.1 chr14 40386252 40386794 + lincRNA NOVEL OTTHUMG00000170677.1 543 453 2 ENSG00000258480.1 RP11-662J14.2 chr14 40387558 40389140 + lincRNA NOVEL OTTHUMG00000170678.1 1583 547 2 ENSG00000227579.4 RP1-35C21.2 chr1 177393287 177597709 - lincRNA NOVEL OTTHUMG00000040862.1 204423 938 7 ENSG00000251363.2 RP11-129M6.1 chr14 40954898 40975877 + lincRNA NOVEL OTTHUMG00000170679.1 20980 696 4 ENSG00000258385.1 RP11-629F19.1 chr14 41296286 41298734 + processed_pseudogene KNOWN OTTHUMG00000170689.1 2449 2449 1 ENSG00000221695.1 AL390335.1 chr14 41349294 41349367 + miRNA NOVEL NA 74 74 1 ENSG00000279972.1 RP11-354G16.1 chr14 41514972 41515350 - TEC KNOWN OTTHUMG00000172922.1 379 379 1 ENSG00000258901.2 CTD-2298J14.1 chr14 41555662 41556055 - processed_pseudogene KNOWN OTTHUMG00000170690.2 394 394 1 ENSG00000258636.1 CTD-2298J14.2 chr14 41587861 41604856 - lincRNA NOVEL OTTHUMG00000170691.1 16996 530 2 ENSG00000251858.1 SNORA31 chr14 41594463 41594591 + snoRNA NOVEL NA 129 129 1 ENSG00000165379.12 LRFN5 chr14 41607570 41904549 + protein_coding KNOWN OTTHUMG00000140261.4 296980 6140 23 ENSG00000258536.1 RP11-1053O12.1 chr14 41742639 41742963 + processed_pseudogene KNOWN OTTHUMG00000170681.1 325 325 1 ENSG00000266500.1 AL138498.1 chr14 41952476 41952560 + miRNA NOVEL NA 85 85 1 ENSG00000266393.1 AL122019.1 chr1 177552870 177552960 + miRNA NOVEL NA 91 91 1 ENSG00000259149.1 RP11-313C4.1 chr14 42259731 42268586 - lincRNA NOVEL OTTHUMG00000170695.1 8856 318 2 ENSG00000222084.1 AL445074.1 chr14 42300751 42300862 + miRNA NOVEL NA 112 112 1 ENSG00000258394.1 CTD-2307P3.1 chr14 42362983 42703655 + sense_overlapping NOVEL OTTHUMG00000170702.2 340673 515 4 ENSG00000258850.1 RP11-214N1.1 chr14 42412573 42528888 + lincRNA NOVEL OTTHUMG00000170696.1 116316 854 2 ENSG00000258505.1 RP11-90P16.1 chr14 42608868 42609577 + transcribed_processed_pseudogene KNOWN OTTHUMG00000170697.2 710 710 1 ENSG00000258622.2 RP11-90P16.2 chr14 42657763 42657918 - processed_pseudogene KNOWN OTTHUMG00000170698.2 156 156 1 ENSG00000258934.1 RP11-97N10.1 chr14 42807378 42808112 - processed_pseudogene KNOWN OTTHUMG00000170703.1 735 735 1 ENSG00000259047.1 RP11-16O13.1 chr14 42989201 42989483 + processed_pseudogene KNOWN OTTHUMG00000170704.1 283 283 1 ENSG00000258406.1 RP11-88E18.1 chr14 43274824 43275697 + processed_pseudogene KNOWN OTTHUMG00000170705.1 874 874 1 ENSG00000259051.1 HNRNPUP1 chr14 43300263 43300595 + processed_pseudogene KNOWN OTTHUMG00000170706.1 333 333 1 ENSG00000236720.1 RP11-63B19.1 chr1 177700524 177710330 + lincRNA NOVEL OTTHUMG00000040863.1 9807 1666 4 ENSG00000258828.2 KRT8P2 chr14 43540883 43541826 - processed_pseudogene KNOWN OTTHUMG00000170707.2 944 944 1 ENSG00000258387.1 RP11-557C9.3 chr14 43592142 43592262 - processed_pseudogene KNOWN OTTHUMG00000170708.1 121 121 1 ENSG00000258894.1 RP11-557C9.1 chr14 43595136 43596683 + processed_pseudogene KNOWN OTTHUMG00000170709.1 1548 1548 1 ENSG00000258969.1 RP11-305B6.3 chr14 43995781 44384545 - lincRNA NOVEL OTTHUMG00000170682.1 388765 257 3 ENSG00000259019.1 EIF4BP1 chr14 44077534 44077884 - transcribed_processed_pseudogene KNOWN OTTHUMG00000170683.1 351 351 1 ENSG00000259137.1 RP11-305B6.1 chr14 44120210 44120761 - processed_pseudogene KNOWN OTTHUMG00000170684.1 552 552 1 ENSG00000259148.1 RP11-322L17.1 chr14 44290997 44291718 - processed_pseudogene KNOWN OTTHUMG00000170685.1 722 722 1 ENSG00000259126.1 RP11-99L13.2 chr14 44392531 44393716 - lincRNA NOVEL OTTHUMG00000170686.1 1186 268 4 ENSG00000277472.1 AL161752.1 chr14 44394175 44394265 - miRNA NOVEL NA 91 91 1 ENSG00000258487.1 RP11-99L13.1 chr14 44444747 44480618 - lincRNA NOVEL OTTHUMG00000170687.1 35872 675 7 ENSG00000120341.17 SEC16B chr1 177923956 177984303 - protein_coding KNOWN OTTHUMG00000167206.17 60348 7377 100 ENSG00000189139.5 FSCB chr14 44504342 44507279 - protein_coding KNOWN OTTHUMG00000140262.1 2938 2938 1 ENSG00000258747.1 RP11-163M18.1 chr14 44507407 44538513 + antisense NOVEL OTTHUMG00000170688.1 31107 801 8 ENSG00000258998.1 RP11-398E10.1 chr14 44763157 44782829 - lincRNA NOVEL OTTHUMG00000170717.1 19673 2904 4 ENSG00000259000.1 DOCK11P1 chr14 44860316 44866247 - processed_pseudogene KNOWN OTTHUMG00000170718.1 5932 5932 1 ENSG00000258633.1 RP11-857B24.1 chr14 44876874 44897077 - antisense NOVEL OTTHUMG00000170719.1 20204 693 2 ENSG00000258509.1 RP11-857B24.3 chr14 44887434 44887741 - processed_pseudogene KNOWN OTTHUMG00000170720.1 308 308 1 ENSG00000259046.1 RP11-857B24.2 chr14 44888556 44889041 - processed_pseudogene KNOWN OTTHUMG00000170721.1 486 486 1 ENSG00000179476.6 C14orf28 chr14 44897295 44907257 + protein_coding KNOWN OTTHUMG00000170722.1 9963 3864 16 ENSG00000258949.1 RP11-857B24.5 chr14 44898908 44911863 - antisense NOVEL OTTHUMG00000170723.1 12956 360 3 ENSG00000179454.12 KLHL28 chr14 44924319 45042322 - protein_coding KNOWN OTTHUMG00000140263.4 118004 8076 24 ENSG00000254154.7 RP4-798P15.3 chr1 177928788 178038007 - processed_transcript NOVEL OTTHUMG00000035027.22 109220 7841 82 ENSG00000198718.11 FAM179B chr14 44962208 45074431 + protein_coding KNOWN OTTHUMG00000140264.2 112224 10274 81 ENSG00000278147.1 CTD-3028N15.3 chr14 45079849 45080189 + lincRNA NOVEL OTTHUMG00000186825.1 341 341 1 ENSG00000249163.3 CTD-3028N15.1 chr14 45083045 45083977 - antisense NOVEL OTTHUMG00000170806.1 933 849 2 ENSG00000185246.16 PRPF39 chr14 45084099 45116282 + protein_coding KNOWN OTTHUMG00000140265.3 32184 4932 109 ENSG00000212615.1 SNORD58 chr14 45088243 45088308 + snoRNA NOVEL NA 66 66 1 ENSG00000239043.1 SNORD127 chr14 45110883 45110968 + snoRNA KNOWN NA 86 86 1 ENSG00000100442.9 FKBP3 chr14 45115600 45135319 - protein_coding KNOWN OTTHUMG00000140267.2 19720 2262 24 ENSG00000187790.9 FANCM chr14 45135940 45200890 + protein_coding KNOWN OTTHUMG00000170807.1 64951 8468 99 ENSG00000129534.12 MIS18BP1 chr14 45203190 45253540 - protein_coding KNOWN OTTHUMG00000140266.3 50351 6250 64 ENSG00000199739.1 RNU6-552P chr14 45274359 45274477 - snRNA KNOWN NA 119 119 1 ENSG00000242193.8 RP11-568K15.1 chr1 178006136 178037950 - unitary_pseudogene KNOWN OTTHUMG00000154878.2 31815 5564 27 ENSG00000258608.1 DNAJC19P9 chr14 45290036 45290386 + processed_pseudogene KNOWN OTTHUMG00000170808.1 351 351 1 ENSG00000260046.1 RP11-454K7.3 chr14 45369215 45370839 + lincRNA NOVEL OTTHUMG00000172925.1 1625 1625 1 ENSG00000257900.2 RP11-454K7.1 chr14 45377268 45389286 + lincRNA NOVEL OTTHUMG00000170809.1 12019 548 2 ENSG00000258746.2 RP11-454K7.2 chr14 45502742 45503140 - processed_pseudogene KNOWN OTTHUMG00000170810.2 399 399 1 ENSG00000258845.1 RP11-945F5.1 chr14 45567995 45569069 + lincRNA NOVEL OTTHUMG00000170730.1 1075 645 2 ENSG00000258616.4 RP11-369C8.1 chr14 45706250 45715952 - lincRNA NOVEL OTTHUMG00000170731.2 9703 1144 14 ENSG00000264420.1 AL158111.1 chr14 45816143 45816229 - miRNA NOVEL NA 87 87 1 ENSG00000258700.4 LINC00871 chr14 45940943 46501823 + lincRNA NOVEL OTTHUMG00000170871.3 560881 1349 17 ENSG00000165496.4 RPL10L chr14 46651010 46651821 - protein_coding KNOWN OTTHUMG00000157869.2 812 812 1 ENSG00000139915.17 MDGA2 chr14 46839629 47674954 - protein_coding KNOWN OTTHUMG00000029429.10 835326 8226 92 ENSG00000276563.1 RP11-568K15.2 chr1 178017127 178017343 + processed_pseudogene KNOWN OTTHUMG00000187543.1 217 217 1 ENSG00000251735.1 SNORA25 chr14 46960423 46960546 + snoRNA NOVEL NA 124 124 1 ENSG00000258392.1 RPA2P1 chr14 46996454 46997174 + processed_pseudogene KNOWN OTTHUMG00000170872.1 721 721 1 ENSG00000244053.1 RPL13AP2 chr14 47200575 47201104 - processed_pseudogene KNOWN OTTHUMG00000157872.1 530 530 1 ENSG00000214903.4 RPS15AP3 chr14 47444106 47444494 - processed_pseudogene KNOWN OTTHUMG00000157887.1 389 389 1 ENSG00000281262.1 AL079306.1 chr14 47540522 47540580 + miRNA NOVEL NA 59 59 1 ENSG00000263945.1 MIR548Y chr14 47760995 47761104 - miRNA KNOWN NA 110 110 1 ENSG00000259129.4 LINC00648 chr14 47764954 47795092 - lincRNA NOVEL OTTHUMG00000170822.3 30139 3043 12 ENSG00000259117.1 RP11-476J6.1 chr14 47801926 47802201 - processed_pseudogene KNOWN OTTHUMG00000170796.1 276 276 1 ENSG00000258639.1 RP11-10A2.1 chr14 48045481 48046216 + processed_pseudogene KNOWN OTTHUMG00000170797.1 736 614 2 ENSG00000270359.1 RP11-2G1.3 chr14 48319068 48319394 - processed_pseudogene KNOWN OTTHUMG00000184533.1 327 327 1 ENSG00000243485.3 RP11-34P13.3 chr1 29554 31109 + lincRNA NOVEL OTTHUMG00000000959.2 1556 1021 5 ENSG00000225972.1 MTND1P23 chr1 629062 629433 + unprocessed_pseudogene KNOWN OTTHUMG00000002338.1 372 372 1 ENSG00000224904.1 RP5-934G17.6 chr1 11877770 11880406 + processed_pseudogene KNOWN OTTHUMG00000002390.1 2637 2637 1 ENSG00000224687.1 RASAL2-AS1 chr1 178091508 178093984 - lincRNA NOVEL OTTHUMG00000040865.1 2477 2356 6 ENSG00000207366.1 RNU6-297P chr14 48341226 48341332 - snRNA KNOWN NA 107 107 1 ENSG00000258751.1 RP11-2G1.1 chr14 48396508 48491767 - lincRNA NOVEL OTTHUMG00000170798.1 95260 487 6 ENSG00000258750.2 RP11-2G1.2 chr14 48398310 48399375 + processed_pseudogene KNOWN OTTHUMG00000170799.2 1066 1066 1 ENSG00000242417.1 RP11-286B5.1 chr14 48489883 48490434 + processed_pseudogene KNOWN OTTHUMG00000157890.1 552 552 1 ENSG00000251731.1 AL512359.1 chr14 48493933 48494064 - miRNA NOVEL NA 132 132 1 ENSG00000258381.1 RP11-737F10.1 chr14 48819360 48819593 + processed_pseudogene KNOWN OTTHUMG00000170800.1 234 234 1 ENSG00000258868.1 RP11-816J8.1 chr14 49057713 49077505 - lincRNA NOVEL OTTHUMG00000170868.1 19793 522 4 ENSG00000258401.1 RP11-326E7.1 chr14 49373966 49374383 + processed_pseudogene KNOWN OTTHUMG00000170869.1 418 418 1 ENSG00000252424.1 RNA5SP384 chr14 49552633 49552748 + rRNA KNOWN NA 116 116 1 ENSG00000213741.7 RPS29 chr14 49570984 49599164 - protein_coding KNOWN OTTHUMG00000140272.5 28181 9783 22 ENSG00000075391.15 RASAL2 chr1 178094141 178484147 + protein_coding KNOWN OTTHUMG00000035022.4 390007 16044 51 ENSG00000244270.1 RPL32P29 chr14 49577392 49577794 - processed_pseudogene KNOWN OTTHUMG00000158047.1 403 403 1 ENSG00000258486.3 RN7SL1 chr14 49586579 49586878 + non_coding KNOWN OTTHUMG00000171559.1 300 300 1 ENSG00000276168.1 RN7SL1 chr14 49586580 49586878 + misc_RNA KNOWN NA 299 299 1 ENSG00000281893.1 AL139099.3 chr14 49586722 49586791 + miRNA NOVEL NA 70 70 1 ENSG00000281255.1 AL139099.2 chr14 49586803 49586882 + miRNA NOVEL NA 80 80 1 ENSG00000252919.1 Y_RNA chr14 49592236 49592337 - misc_RNA NOVEL NA 102 102 1 ENSG00000165501.15 LRR1 chr14 49598697 49614672 + protein_coding KNOWN OTTHUMG00000140273.3 15976 2359 20 ENSG00000258568.1 RHOQP1 chr14 49599994 49600572 + processed_pseudogene KNOWN OTTHUMG00000170812.1 579 579 1 ENSG00000278009.1 RP11-649E7.8 chr14 49601011 49601124 - unprocessed_pseudogene KNOWN OTTHUMG00000187836.1 114 114 1 ENSG00000165502.6 RPL36AL chr14 49618519 49620685 - protein_coding KNOWN OTTHUMG00000152330.2 2167 746 2 ENSG00000270575.1 RP11-21M7.2 chr1 178194342 178194709 - processed_pseudogene KNOWN OTTHUMG00000184436.1 368 311 2 ENSG00000168282.5 MGAT2 chr14 49620795 49623481 + protein_coding KNOWN OTTHUMG00000140271.1 2687 2687 1 ENSG00000258377.1 RP11-649E7.5 chr14 49620815 49623480 - antisense NOVEL OTTHUMG00000170874.1 2666 2469 2 ENSG00000165506.13 DNAAF2 chr14 49625174 49635230 - protein_coding KNOWN OTTHUMG00000152331.2 10057 2963 5 ENSG00000258450.1 RP11-649E7.7 chr14 49629291 49629890 - sense_intronic NOVEL OTTHUMG00000171560.1 600 401 2 ENSG00000275425.1 AL139099.1 chr14 49635000 49635077 + miRNA NOVEL NA 78 78 1 ENSG00000100479.11 POLE2 chr14 49643555 49688422 - protein_coding KNOWN OTTHUMG00000170813.2 44868 2955 97 ENSG00000259155.2 RP11-831F12.3 chr14 49677369 49677893 + processed_pseudogene KNOWN OTTHUMG00000170875.2 525 525 1 ENSG00000258462.2 RP11-831F12.4 chr14 49681302 49681886 + processed_pseudogene KNOWN OTTHUMG00000170876.2 585 173 2 ENSG00000221114.1 RNU6ATAC30P chr14 49684544 49684665 + snRNA KNOWN NA 122 122 1 ENSG00000197776.6 KLHDC1 chr14 49693105 49753152 + protein_coding KNOWN OTTHUMG00000140295.3 60048 3006 60 ENSG00000213058.3 RP4-765C7.2 chr1 178411616 178411972 + processed_pseudogene KNOWN OTTHUMG00000035020.1 357 357 1 ENSG00000258400.1 RP11-831F12.2 chr14 49707667 49708792 - antisense NOVEL OTTHUMG00000170814.2 1126 568 2 ENSG00000165516.9 KLHDC2 chr14 49767608 49786385 + protein_coding KNOWN OTTHUMG00000140288.4 18778 6841 85 ENSG00000165525.16 NEMF chr14 49782083 49853203 - protein_coding KNOWN OTTHUMG00000170857.4 71121 9426 161 ENSG00000277634.1 Y_RNA chr14 49839401 49839493 - misc_RNA NOVEL NA 93 93 1 ENSG00000252474.1 RNU6-539P chr14 49839725 49839827 + snRNA KNOWN NA 103 103 1 ENSG00000278771.1 Metazoa_SRP chr14 49853616 49853914 - misc_RNA NOVEL NA 299 299 1 ENSG00000279868.2 AL627171.1 chr14 49853703 49853772 - miRNA NOVEL NA 70 70 1 ENSG00000280102.2 AL627171.2 chr14 49862547 49862626 - miRNA NOVEL NA 80 80 1 ENSG00000274012.1 RN7SL2 chr14 49862550 49862849 - misc_RNA KNOWN NA 300 300 1 ENSG00000280602.1 AL627171.3 chr14 49862638 49862707 - miRNA NOVEL NA 70 70 1 ENSG00000279210.1 RP4-593C16.4 chr1 178479247 178482365 - antisense NOVEL OTTHUMG00000189368.1 3119 423 2 ENSG00000278002.1 RP11-596C23.2 chr14 49863072 49864379 + lincRNA NOVEL OTTHUMG00000186829.1 1308 1308 1 ENSG00000165527.6 ARF6 chr14 49893092 49897054 + protein_coding KNOWN OTTHUMG00000140296.2 3963 3865 2 ENSG00000251929.1 RNU6-189P chr14 49901850 49901950 - snRNA KNOWN NA 101 101 1 ENSG00000274704.1 Metazoa_SRP chr14 49913493 49913760 - misc_RNA NOVEL NA 268 268 1 ENSG00000258946.4 RP11-58E21.4 chr14 49927571 49961960 - lincRNA NOVEL OTTHUMG00000171143.1 34390 3148 11 ENSG00000278038.1 MIR6076 chr14 49966399 49966511 + miRNA KNOWN NA 113 113 1 ENSG00000214900.7 LINC01588 chr14 49981712 50007520 - lincRNA KNOWN OTTHUMG00000167699.1 25809 7061 21 ENSG00000258929.5 RP11-58E21.3 chr14 50007313 50041229 - lincRNA NOVEL OTTHUMG00000171567.3 33917 2963 17 ENSG00000273065.1 RP11-58E21.5 chr14 50039145 50089195 - lincRNA NOVEL OTTHUMG00000186405.1 50051 520 5 ENSG00000273307.1 RP11-58E21.7 chr14 50041643 50089175 - lincRNA NOVEL OTTHUMG00000170885.3 47533 534 5 ENSG00000264809.2 Metazoa_SRP chr1 178484408 178484682 + misc_RNA NOVEL NA 275 275 1 ENSG00000270788.1 PDLIM1P1 chr14 50050368 50051336 + processed_pseudogene KNOWN OTTHUMG00000184391.1 969 969 1 ENSG00000243038.1 RP11-58E21.1 chr14 50052857 50053569 + processed_pseudogene KNOWN OTTHUMG00000157899.1 713 713 1 ENSG00000201358.1 RN7SKP193 chr14 50068568 50068873 + misc_RNA KNOWN NA 306 306 1 ENSG00000168260.2 C14orf183 chr14 50083651 50092643 - protein_coding KNOWN OTTHUMG00000170858.1 8993 975 10 ENSG00000251792.1 Y_RNA chr14 50086982 50087083 + misc_RNA NOVEL NA 102 102 1 ENSG00000100483.12 VCPKMT chr14 50108632 50116600 - protein_coding KNOWN OTTHUMG00000029531.6 7969 2055 27 ENSG00000100485.10 SOS2 chr14 50117120 50231558 - protein_coding KNOWN OTTHUMG00000140292.4 114439 6938 64 ENSG00000087299.10 L2HGDH chr14 50237563 50312548 - protein_coding KNOWN OTTHUMG00000140289.3 74986 6879 52 ENSG00000264712.2 MIR4504 chr14 50299850 50299962 - miRNA KNOWN NA 113 113 1 ENSG00000125375.13 ATP5S chr14 50312326 50335558 + protein_coding KNOWN OTTHUMG00000170866.2 23233 11297 47 ENSG00000188585.6 LINC00083 chr1 178495896 178499634 - lincRNA KNOWN OTTHUMG00000035021.3 3739 1137 4 ENSG00000259071.1 RP11-247L20.4 chr14 50326526 50327909 - lincRNA NOVEL OTTHUMG00000170886.1 1384 446 2 ENSG00000100490.8 CDKL1 chr14 50329404 50416461 - protein_coding KNOWN OTTHUMG00000140290.5 87058 6149 64 ENSG00000258857.1 RP11-247L20.3 chr14 50397013 50398345 + lincRNA NOVEL OTTHUMG00000170887.1 1333 501 3 ENSG00000012983.10 MAP4K5 chr14 50418501 50561126 - protein_coding KNOWN OTTHUMG00000170888.2 142626 7620 97 ENSG00000259113.1 RP11-406H23.2 chr14 50448807 50456742 + lincRNA NOVEL OTTHUMG00000170889.1 7936 502 2 ENSG00000201573.1 Y_RNA chr14 50468397 50468498 - misc_RNA NOVEL NA 102 102 1 ENSG00000273675.1 RP11-406H23.5 chr14 50471769 50472592 + processed_pseudogene KNOWN OTTHUMG00000187837.2 824 824 1 ENSG00000198513.10 ATL1 chr14 50532509 50633068 + protein_coding KNOWN OTTHUMG00000140297.5 100560 4360 57 ENSG00000258577.1 SNRPGP1 chr14 50571919 50572140 - processed_pseudogene KNOWN OTTHUMG00000170979.1 222 222 1 ENSG00000151748.13 SAV1 chr14 50632058 50668331 - protein_coding KNOWN OTTHUMG00000140293.6 36274 5630 18 ENSG00000240021.8 TEX35 chr1 178513077 178548602 + protein_coding KNOWN OTTHUMG00000035023.5 35526 4038 57 ENSG00000243103.3 RN7SL452P chr14 50637691 50637981 - misc_RNA KNOWN NA 291 291 1 ENSG00000269906.1 RP11-248J18.2 chr14 50662511 50663178 - sense_intronic NOVEL OTTHUMG00000183927.1 668 668 1 ENSG00000258491.2 ZFP64P1 chr14 50704343 50705511 - processed_pseudogene KNOWN OTTHUMG00000170900.2 1169 1169 1 ENSG00000100503.22 NIN chr14 50719763 50831121 - protein_coding KNOWN OTTHUMG00000029569.15 111359 13683 284 ENSG00000270062.1 RP11-248J18.3 chr14 50723777 50724272 - sense_intronic NOVEL OTTHUMG00000183928.1 496 496 1 ENSG00000258843.1 RP11-286O18.1 chr14 50821880 50823501 + antisense NOVEL OTTHUMG00000170980.1 1622 392 2 ENSG00000252945.1 snoU83B chr14 50844625 50844712 + snoRNA NOVEL NA 88 88 1 ENSG00000258687.1 RP11-218E20.2 chr14 50848122 50865659 + antisense NOVEL OTTHUMG00000170981.1 17538 174 2 ENSG00000100504.15 PYGL chr14 50857891 50944736 - protein_coding KNOWN OTTHUMG00000166596.6 86846 4798 73 ENSG00000131969.13 ABHD12B chr14 50872160 50904970 + protein_coding KNOWN OTTHUMG00000140286.4 32811 4444 73 ENSG00000213057.5 C1orf220 chr1 178542752 178548889 + lincRNA KNOWN OTTHUMG00000035078.2 6138 2775 6 ENSG00000258745.1 RP11-218E20.5 chr14 50912226 50913358 + antisense NOVEL OTTHUMG00000171000.1 1133 535 2 ENSG00000258711.2 RP11-218E20.3 chr14 50956259 50962002 - lincRNA NOVEL OTTHUMG00000171001.2 5744 4714 2 ENSG00000100505.12 TRIM9 chr14 50975262 51096061 - protein_coding KNOWN OTTHUMG00000140291.2 120800 8945 38 ENSG00000259055.1 RP11-1140I5.1 chr14 51088957 51091288 + antisense NOVEL OTTHUMG00000171002.1 2332 1131 3 ENSG00000139921.11 TMX1 chr14 51240162 51257546 + protein_coding KNOWN OTTHUMG00000171003.3 17385 4499 19 ENSG00000201376.1 SNORA70 chr14 51244090 51244224 + snoRNA NOVEL NA 135 135 1 ENSG00000201820.1 Y_RNA chr14 51253933 51254023 - misc_RNA NOVEL NA 91 91 1 ENSG00000258955.1 LINC00519 chr14 51304416 51328386 - lincRNA NOVEL OTTHUMG00000171090.1 23971 682 2 ENSG00000258479.4 LINC00640 chr14 51333393 51365557 + lincRNA NOVEL OTTHUMG00000171072.1 32165 1568 14 ENSG00000258942.1 RP11-255G12.2 chr14 51344914 51385603 - lincRNA NOVEL OTTHUMG00000171073.1 40690 813 4 ENSG00000201347.1 RNA5SP69 chr1 178560913 178561029 + rRNA KNOWN NA 117 117 1 ENSG00000258808.1 RP11-255G12.3 chr14 51392128 51397135 - lincRNA NOVEL OTTHUMG00000171074.1 5008 572 4 ENSG00000258893.1 SETP2 chr14 51436038 51436963 + processed_pseudogene KNOWN OTTHUMG00000171075.1 926 926 1 ENSG00000258537.4 FRMD6-AS2 chr14 51454512 51599952 - lincRNA NOVEL OTTHUMG00000171076.1 145441 917 7 ENSG00000139926.14 FRMD6 chr14 51489100 51730727 + protein_coding KNOWN OTTHUMG00000140294.2 241628 9416 108 ENSG00000252400.1 RNU6-1291P chr14 51522864 51522967 + snRNA KNOWN NA 104 104 1 ENSG00000277050.1 RP11-102G14.1 chr14 51637348 51637947 - antisense NOVEL OTTHUMG00000186831.1 600 600 1 ENSG00000273888.1 FRMD6-AS1 chr14 51649516 51651744 - antisense KNOWN OTTHUMG00000186832.1 2229 2229 1 ENSG00000251756.1 RNA5SP385 chr14 51692752 51692861 + rRNA KNOWN NA 110 110 1 ENSG00000207004.1 RNU6-301P chr14 51724103 51724209 + snRNA KNOWN NA 107 107 1 ENSG00000259111.1 RP11-280K24.1 chr14 51750560 51763114 + lincRNA NOVEL OTTHUMG00000171077.1 12555 448 3 ENSG00000199347.1 RNU5E-1 chr1 11908152 11908271 + snRNA KNOWN NA 120 120 1 ENSG00000273384.1 RP5-1098D14.1 chr1 178651706 178652282 + lincRNA NOVEL OTTHUMG00000186472.1 577 577 1 ENSG00000258423.1 OR7E105P chr14 51756996 51757988 + unprocessed_pseudogene KNOWN OTTHUMG00000171078.1 993 993 1 ENSG00000258550.1 OR7E106P chr14 51763056 51764076 - unprocessed_pseudogene KNOWN OTTHUMG00000171079.1 1021 1021 1 ENSG00000258535.1 RP11-280K24.4 chr14 51765276 51825422 + sense_overlapping NOVEL OTTHUMG00000171080.1 60147 5982 10 ENSG00000258849.1 OR7E159P chr14 51771789 51772086 - unprocessed_pseudogene KNOWN OTTHUMG00000171081.1 298 298 1 ENSG00000259157.1 RP11-280K24.6 chr14 51787461 51787743 + unprocessed_pseudogene KNOWN OTTHUMG00000171082.1 283 283 1 ENSG00000186469.7 GNG2 chr14 51826195 51979342 + protein_coding KNOWN OTTHUMG00000171083.2 153148 6379 65 ENSG00000258928.1 RP11-463J10.2 chr14 51916145 51918571 - antisense NOVEL OTTHUMG00000171084.1 2427 529 3 ENSG00000259007.1 RP11-463J10.3 chr14 51967003 51969800 - antisense NOVEL OTTHUMG00000171085.1 2798 479 2 ENSG00000258854.1 RP11-463J10.4 chr14 51982520 51987219 - antisense NOVEL OTTHUMG00000171086.1 4700 467 2 ENSG00000087302.7 C14orf166 chr14 51989475 52010691 + protein_coding KNOWN OTTHUMG00000152332.3 21217 8323 32 ENSG00000266417.1 MIR4424 chr1 178677749 178677834 + miRNA KNOWN NA 86 86 1 ENSG00000087303.15 NID2 chr14 52004803 52069228 - protein_coding KNOWN OTTHUMG00000140298.2 64426 6392 98 ENSG00000258694.1 RP11-1033H12.1 chr14 52111122 52129625 - lincRNA NOVEL OTTHUMG00000171087.1 18504 349 3 ENSG00000258981.1 COX5AP2 chr14 52117602 52117995 + processed_pseudogene KNOWN OTTHUMG00000171088.1 394 394 1 ENSG00000258440.1 RP11-1033H12.3 chr14 52155740 52156179 + processed_pseudogene KNOWN OTTHUMG00000171089.1 440 440 1 ENSG00000168229.3 PTGDR chr14 52267713 52276724 + protein_coding KNOWN OTTHUMG00000140299.2 9012 3033 5 ENSG00000261208.1 RP11-452D12.1 chr14 52286797 52289268 + processed_pseudogene KNOWN OTTHUMG00000172934.1 2472 1949 3 ENSG00000125384.6 PTGER2 chr14 52314305 52328606 + protein_coding KNOWN OTTHUMG00000140300.2 14302 2473 5 ENSG00000087301.7 TXNDC16 chr14 52430590 52552522 - protein_coding KNOWN OTTHUMG00000171103.1 121933 4739 33 ENSG00000180998.10 GPR137C chr14 52553148 52637713 + protein_coding KNOWN OTTHUMG00000171104.1 84566 6193 25 ENSG00000197930.11 ERO1L chr14 52639916 52695900 - protein_coding KNOWN OTTHUMG00000140301.2 55985 7548 82 ENSG00000273062.1 RP11-428K3.1 chr1 178724306 178726285 - antisense NOVEL OTTHUMG00000186473.1 1980 1980 1 ENSG00000258757.1 RP11-841O20.2 chr14 52640839 52641566 + antisense NOVEL OTTHUMG00000171105.1 728 581 2 ENSG00000100519.10 PSMC6 chr14 52707172 52728587 + protein_coding KNOWN OTTHUMG00000152333.6 21416 7482 122 ENSG00000198252.10 STYX chr14 52730180 52774998 + protein_coding KNOWN OTTHUMG00000140306.2 44819 4978 25 ENSG00000100522.7 GNPNAT1 chr14 52775194 52791668 - protein_coding KNOWN OTTHUMG00000152334.2 16475 4009 22 ENSG00000259049.1 RP11-589M4.1 chr14 52775237 52777740 + antisense NOVEL OTTHUMG00000171149.1 2504 1426 4 ENSG00000258698.1 RP11-589M4.3 chr14 52792875 52820034 - lincRNA NOVEL OTTHUMG00000171150.1 27160 196 2 ENSG00000258802.1 RP11-589M4.2 chr14 52798904 52799061 - processed_pseudogene KNOWN OTTHUMG00000171151.1 158 158 1 ENSG00000073712.12 FERMT2 chr14 52857268 52952435 - protein_coding KNOWN OTTHUMG00000140309.2 95168 8510 123 ENSG00000271075.1 RP11-589M4.4 chr14 52871458 52872217 + processed_pseudogene KNOWN OTTHUMG00000184393.1 760 760 1 ENSG00000258503.1 RP11-368P15.1 chr14 53011971 53012267 + processed_pseudogene KNOWN OTTHUMG00000171152.1 297 297 1 ENSG00000116191.16 RALGPS2 chr1 178725147 178921841 + protein_coding KNOWN OTTHUMG00000035076.4 196695 9178 84 ENSG00000258993.1 RP11-368P15.2 chr14 53023055 53023597 + processed_pseudogene KNOWN OTTHUMG00000171153.1 543 247 2 ENSG00000100523.13 DDHD1 chr14 53036745 53153282 - protein_coding KNOWN OTTHUMG00000140305.3 116538 17944 74 ENSG00000258985.1 RP11-368P15.3 chr14 53036755 53038251 + antisense NOVEL OTTHUMG00000171154.1 1497 366 2 ENSG00000266552.1 AL356020.1 chr14 53153049 53153115 - miRNA NOVEL NA 67 67 1 ENSG00000258731.1 RP11-547D23.1 chr14 53153354 53157528 + antisense NOVEL OTTHUMG00000171155.1 4175 1076 3 ENSG00000237356.4 AL163953.3 chr14 53169054 53687258 + processed_transcript NOVEL OTTHUMG00000133700.3 518205 2149 15 ENSG00000225680.1 AL163953.2 chr14 53599832 53614026 - lincRNA NOVEL OTTHUMG00000133689.1 14195 726 2 ENSG00000226132.1 RPS3AP46 chr14 53612724 53613405 + processed_pseudogene KNOWN OTTHUMG00000060736.1 682 682 1 ENSG00000235269.1 AL162759.1 chr14 53768942 53850882 - lincRNA NOVEL OTTHUMG00000150105.1 81941 602 4 ENSG00000231922.1 AL138479.3 chr14 53917270 53917753 - processed_pseudogene KNOWN OTTHUMG00000060735.1 484 484 1 ENSG00000228196.1 PTPN2P1 chr1 178746683 178747754 - processed_pseudogene KNOWN OTTHUMG00000035074.1 1072 1072 1 ENSG00000266431.1 MIR5580 chr14 53948427 53948484 - miRNA KNOWN NA 58 58 1 ENSG00000125378.14 BMP4 chr14 53949736 53958761 - protein_coding KNOWN OTTHUMG00000140303.3 9026 3082 26 ENSG00000224004.2 ATP5C1P1 chr14 53991101 53991995 - processed_pseudogene KNOWN OTTHUMG00000029710.3 895 895 1 ENSG00000100526.18 CDKN3 chr14 54396849 54420218 + protein_coding KNOWN OTTHUMG00000140302.3 23370 1836 79 ENSG00000100528.10 CNIH1 chr14 54423560 54441431 - protein_coding KNOWN OTTHUMG00000152335.3 17872 5060 33 ENSG00000258753.1 RP11-794A8.1 chr14 54470709 54471218 + lincRNA NOVEL OTTHUMG00000170998.1 510 385 2 ENSG00000197045.11 GMFB chr14 54474484 54489196 - protein_coding KNOWN OTTHUMG00000140307.2 14713 7966 54 ENSG00000100532.10 CGRRF1 chr14 54509812 54539309 + protein_coding KNOWN OTTHUMG00000140308.4 29498 4564 40 ENSG00000020577.12 SAMD4A chr14 54567097 54793315 + protein_coding KNOWN OTTHUMG00000170999.3 226219 12170 85 ENSG00000274983.1 AL138994.1 chr14 54641608 54641705 - miRNA NOVEL NA 98 98 1 ENSG00000201791.1 SNORA63 chr1 178753654 178753772 - snoRNA NOVEL NA 119 119 1 ENSG00000131979.17 GCH1 chr14 54842008 54902852 - protein_coding KNOWN OTTHUMG00000029754.4 60845 2951 42 ENSG00000252019.1 RNU6ATAC9P chr14 54859215 54859330 + snRNA KNOWN NA 116 116 1 ENSG00000265432.1 MIR4308 chr14 54878113 54878193 - miRNA KNOWN NA 81 81 1 ENSG00000258872.2 FDPSP3 chr14 54884849 54886213 - transcribed_processed_pseudogene KNOWN OTTHUMG00000171028.2 1365 1013 2 ENSG00000198554.10 WDHD1 chr14 54938950 55027105 - protein_coding KNOWN OTTHUMG00000140304.8 88156 6385 72 ENSG00000233924.1 AL160471.6 chr14 55004813 55005687 - processed_pseudogene KNOWN OTTHUMG00000150485.1 875 875 1 ENSG00000180008.8 SOCS4 chr14 55027230 55049488 + protein_coding KNOWN OTTHUMG00000140311.2 22259 7043 9 ENSG00000168175.13 MAPK1IP1L chr14 55051631 55070192 + protein_coding KNOWN OTTHUMG00000171029.2 18562 6988 16 ENSG00000131981.14 LGALS3 chr14 55124110 55145413 + protein_coding KNOWN OTTHUMG00000171030.3 21304 2397 30 ENSG00000126787.11 DLGAP5 chr14 55148112 55191678 - protein_coding KNOWN OTTHUMG00000140310.2 43567 3667 52 ENSG00000116194.11 ANGPTL1 chr1 178849705 178871052 - protein_coding KNOWN OTTHUMG00000035075.2 21348 3403 13 ENSG00000258050.2 RP11-698F20.3 chr14 55196727 55199013 - lincRNA NOVEL OTTHUMG00000171031.1 2287 568 2 ENSG00000279392.1 AL158801.1 chr14 55229217 55229681 + protein_coding NOVEL NA 465 465 1 ENSG00000271180.1 RP11-665C16.8 chr14 55240622 55241080 - processed_pseudogene KNOWN OTTHUMG00000184534.1 459 459 1 ENSG00000258413.1 RP11-665C16.6 chr14 55262767 55272075 - lincRNA NOVEL OTTHUMG00000171032.1 9309 748 4 ENSG00000178974.8 FBXO34 chr14 55271303 55361918 + protein_coding KNOWN OTTHUMG00000171033.1 90616 4133 17 ENSG00000239686.1 RP11-665C16.1 chr14 55282296 55282643 - processed_pseudogene KNOWN OTTHUMG00000157907.1 348 348 1 ENSG00000278818.1 Metazoa_SRP chr14 55285227 55285558 + misc_RNA NOVEL NA 332 332 1 ENSG00000258469.1 CHMP4BP1 chr14 55298644 55299231 + processed_pseudogene KNOWN OTTHUMG00000171034.1 588 588 1 ENSG00000258455.1 RP11-665C16.5 chr14 55325834 55339501 - antisense NOVEL OTTHUMG00000171035.1 13668 363 3 ENSG00000126775.8 ATG14 chr14 55366392 55411858 - protein_coding KNOWN OTTHUMG00000172129.1 45467 5052 17 ENSG00000116199.10 FAM20B chr1 179025804 179076562 + protein_coding KNOWN OTTHUMG00000035073.2 50759 6039 11 ENSG00000259318.1 RP11-454L9.2 chr14 55394940 55395233 - processed_pseudogene KNOWN OTTHUMG00000172130.1 294 294 1 ENSG00000182521.5 TBPL2 chr14 55413541 55456726 - protein_coding KNOWN OTTHUMG00000140313.2 43186 2407 11 ENSG00000239199.1 RPL21P6 chr14 55413556 55414059 - processed_pseudogene KNOWN OTTHUMG00000157908.1 504 504 1 ENSG00000186615.9 KTN1-AS1 chr14 55499278 55580110 - antisense KNOWN OTTHUMG00000171057.1 80833 3595 13 ENSG00000213641.4 RPL7AP4 chr14 55543401 55544169 + processed_pseudogene KNOWN OTTHUMG00000157913.1 769 769 1 ENSG00000271484.1 RP11-132J14.3 chr14 55546674 55548123 + unprocessed_pseudogene KNOWN OTTHUMG00000184542.1 1450 1120 2 ENSG00000126777.16 KTN1 chr14 55559072 55701526 + protein_coding KNOWN OTTHUMG00000140312.4 142455 17575 432 ENSG00000200742.1 Y_RNA chr14 55651534 55651634 + misc_RNA NOVEL NA 101 101 1 ENSG00000258784.1 RP11-813I20.2 chr14 55748208 55773203 + lincRNA NOVEL OTTHUMG00000171058.1 24996 459 4 ENSG00000177350.6 RPL13AP3 chr14 55766177 55767717 + transcribed_processed_pseudogene KNOWN OTTHUMG00000158048.1 1541 1541 2 ENSG00000232750.2 RP11-177A2.5 chr1 179035309 179035652 - processed_pseudogene KNOWN OTTHUMG00000057647.2 344 344 1 ENSG00000258791.6 LINC00520 chr14 55781135 55796688 - lincRNA NOVEL OTTHUMG00000171059.4 15554 2462 19 ENSG00000259868.2 RP11-1012E15.2 chr14 55896547 55962970 + processed_transcript NOVEL OTTHUMG00000172943.2 66424 1516 8 ENSG00000221254.2 AL163952.1 chr14 56075480 56075566 + miRNA NOVEL NA 87 87 1 ENSG00000277763.1 CTD-2588E21.1 chr14 56117316 56117990 - lincRNA NOVEL OTTHUMG00000186850.1 675 675 1 ENSG00000139946.8 PELI2 chr14 56117814 56301526 + protein_coding KNOWN OTTHUMG00000152336.2 183713 6278 16 ENSG00000259483.1 RP11-930O11.2 chr14 56303490 56310761 - lincRNA NOVEL OTTHUMG00000172126.1 7272 517 4 ENSG00000275569.1 RP11-930O11.3 chr14 56305838 56306394 + antisense NOVEL OTTHUMG00000186851.2 557 557 1 ENSG00000259719.4 RP11-930O11.1 chr14 56310880 56345001 + lincRNA NOVEL OTTHUMG00000172127.1 34122 846 9 ENSG00000070269.12 TMEM260 chr14 56488354 56650606 + protein_coding KNOWN OTTHUMG00000152337.2 162253 8077 131 ENSG00000258803.1 RP11-624J12.1 chr14 56514331 56551309 + lincRNA NOVEL OTTHUMG00000171066.1 36979 2226 2 ENSG00000186283.12 TOR3A chr1 179081377 179098023 + protein_coding KNOWN OTTHUMG00000035077.4 16647 3917 29 ENSG00000258428.4 RP11-1085N6.2 chr14 56633244 56648658 - antisense NOVEL OTTHUMG00000171067.1 15415 461 6 ENSG00000259133.4 RP11-1085N6.3 chr14 56648965 56730535 - antisense NOVEL OTTHUMG00000171068.1 81571 734 6 ENSG00000242995.1 RP11-1085N6.1 chr14 56683421 56683741 - processed_pseudogene KNOWN OTTHUMG00000157919.1 321 321 1 ENSG00000258703.1 RP11-1085N6.4 chr14 56759379 56765757 + lincRNA NOVEL OTTHUMG00000171069.1 6379 807 2 ENSG00000276389.1 AL161757.1 chr14 56781728 56781837 + miRNA NOVEL NA 110 110 1 ENSG00000165588.15 OTX2 chr14 56799905 56810479 - protein_coding KNOWN OTTHUMG00000152338.7 10575 3272 27 ENSG00000248550.3 OTX2-AS1 chr14 56813183 57152177 + lincRNA NOVEL OTTHUMG00000171304.1 338995 3118 14 ENSG00000258776.1 RP11-1085N6.5 chr14 56817570 56893710 - lincRNA NOVEL OTTHUMG00000171305.1 76141 2251 10 ENSG00000243801.3 RN7SL461P chr14 56824375 56824656 - misc_RNA KNOWN NA 282 282 1 ENSG00000200818.1 RNU6-1204P chr14 56824986 56825092 + snRNA KNOWN NA 107 107 1 ENSG00000201801.1 RNU5E-4P chr1 11909808 11909927 - snRNA KNOWN NA 120 120 1 ENSG00000143322.18 ABL2 chr1 179099327 179229684 - protein_coding KNOWN OTTHUMG00000035199.5 130358 13257 112 ENSG00000243388.1 RPL3P3 chr14 56978409 56979621 + processed_pseudogene KNOWN OTTHUMG00000157922.1 1213 1213 1 ENSG00000258758.1 RP11-613G13.1 chr14 57040885 57042504 + processed_pseudogene KNOWN OTTHUMG00000171306.1 1620 1620 1 ENSG00000259136.1 RP11-108M12.2 chr14 57044646 57044960 - processed_pseudogene KNOWN OTTHUMG00000171307.1 315 315 1 ENSG00000258592.1 RP11-108M12.3 chr14 57066260 57112660 - lincRNA NOVEL OTTHUMG00000171308.1 46401 1577 5 ENSG00000070367.14 EXOC5 chr14 57200507 57269008 - protein_coding KNOWN OTTHUMG00000171309.2 68502 12575 106 ENSG00000053770.10 AP5M1 chr14 57268909 57298742 + protein_coding KNOWN OTTHUMG00000140318.4 29834 13034 38 ENSG00000259008.1 RP11-932A10.1 chr14 57355446 57359410 + lincRNA NOVEL OTTHUMG00000171310.1 3965 3965 1 ENSG00000139977.12 NAA30 chr14 57390544 57415917 + protein_coding KNOWN OTTHUMG00000171311.1 25374 7653 16 ENSG00000100557.8 C14orf105 chr14 57469301 57493867 - protein_coding KNOWN OTTHUMG00000140317.6 24567 4107 56 ENSG00000151812.13 SLC35F4 chr14 57563922 57982194 - protein_coding KNOWN OTTHUMG00000171317.2 418273 4240 46 ENSG00000234041.1 RP11-345I18.1 chr1 179137764 179137934 + processed_pseudogene KNOWN OTTHUMG00000041095.1 171 171 1 ENSG00000259039.1 RP11-409I10.2 chr14 57578632 57581320 + antisense NOVEL OTTHUMG00000171319.1 2689 708 2 ENSG00000258856.2 CTD-2325K12.1 chr14 57629841 57631162 + transcribed_processed_pseudogene KNOWN OTTHUMG00000171320.2 1322 1322 2 ENSG00000252837.1 RN7SKP99 chr14 57837354 57837660 - misc_RNA KNOWN NA 307 307 1 ENSG00000259969.1 RP11-999E24.3 chr14 57993545 57994525 - sense_overlapping NOVEL OTTHUMG00000172945.1 981 981 1 ENSG00000139971.14 C14orf37 chr14 57999735 58298139 - protein_coding KNOWN OTTHUMG00000171173.4 298405 7565 24 ENSG00000258836.2 RP11-349A22.2 chr14 58100985 58101574 + processed_pseudogene KNOWN OTTHUMG00000171023.2 590 590 1 ENSG00000243023.2 UBA52P3 chr14 58141279 58141660 + processed_pseudogene KNOWN OTTHUMG00000158053.2 382 382 1 ENSG00000243700.3 RN7SL598P chr14 58179771 58180064 + misc_RNA KNOWN NA 294 294 1 ENSG00000258519.1 RP11-349A22.3 chr14 58184576 58185507 + processed_pseudogene KNOWN OTTHUMG00000171024.3 932 305 2 ENSG00000131966.12 ACTR10 chr14 58200080 58235636 + protein_coding KNOWN OTTHUMG00000171049.8 35557 4039 113 ENSG00000231905.2 SETP10 chr1 179183734 179184547 + processed_pseudogene KNOWN OTTHUMG00000041096.1 814 814 1 ENSG00000100567.11 PSMA3 chr14 58244831 58272012 + protein_coding KNOWN OTTHUMG00000140319.7 27182 3119 84 ENSG00000258682.1 CTD-2002H8.2 chr14 58264662 58269681 + sense_overlapping NOVEL OTTHUMG00000171097.1 5020 576 2 ENSG00000257621.6 PSMA3-AS1 chr14 58265365 58298134 - antisense NOVEL OTTHUMG00000171179.3 32770 7409 49 ENSG00000180189.10 HMGB1P14 chr14 58284773 58285363 + processed_pseudogene KNOWN OTTHUMG00000171109.2 591 591 1 ENSG00000279636.2 LINC00216 chr14 58288033 58289158 + lincRNA KNOWN OTTHUMG00000187383.1 1126 1126 2 ENSG00000252782.1 RNU6-341P chr14 58292293 58292388 - snRNA KNOWN NA 96 96 1 ENSG00000032219.17 ARID4A chr14 58298385 58373887 + protein_coding KNOWN OTTHUMG00000140320.6 75503 7568 132 ENSG00000258658.1 RP11-517O13.3 chr14 58370023 58395641 - antisense NOVEL OTTHUMG00000171230.1 25619 399 2 ENSG00000196860.6 TOMM20L chr14 58395916 58408701 + protein_coding KNOWN OTTHUMG00000140323.2 12786 620 9 ENSG00000258378.1 RP11-517O13.1 chr14 58398557 58427125 + antisense NOVEL OTTHUMG00000171140.1 28569 436 2 ENSG00000212338.1 SNORA67 chr1 179196473 179196579 + snoRNA NOVEL NA 107 107 1 ENSG00000100575.12 TIMM9 chr14 58408494 58427614 - protein_coding KNOWN OTTHUMG00000140322.5 19121 1500 45 ENSG00000100578.13 KIAA0586 chr14 58427385 58551289 + protein_coding KNOWN OTTHUMG00000171141.5 123905 10184 257 ENSG00000252198.1 Y_RNA chr14 58441844 58441992 + misc_RNA NOVEL NA 149 149 1 ENSG00000258650.1 HSBP1P1 chr14 58463971 58464136 + processed_pseudogene KNOWN OTTHUMG00000171142.2 166 166 1 ENSG00000278479.1 AL139021.1 chr14 58506587 58506695 + miRNA NOVEL NA 109 109 1 ENSG00000258900.1 HNRNPCP1 chr14 58521223 58521988 + processed_pseudogene KNOWN OTTHUMG00000171161.1 766 766 1 ENSG00000239510.2 RPL9P5 chr14 58564146 58564616 + processed_pseudogene KNOWN OTTHUMG00000157933.2 471 471 1 ENSG00000165617.13 DACT1 chr14 58633967 58648321 + protein_coding KNOWN OTTHUMG00000140324.5 14355 4490 24 ENSG00000221427.1 AL121819.1 chr14 58771152 58771246 - miRNA NOVEL NA 95 95 1 ENSG00000213598.4 RP11-112J1.1 chr14 58794654 58795029 + processed_pseudogene KNOWN OTTHUMG00000157936.1 376 376 1 ENSG00000201619.1 SNORA67 chr1 179201487 179201627 + snoRNA NOVEL NA 141 141 1 ENSG00000258734.2 RP11-112J1.3 chr14 58827679 58828176 - processed_pseudogene KNOWN OTTHUMG00000171091.2 498 498 1 ENSG00000258583.4 LINC01500 chr14 58828234 59017328 + lincRNA NOVEL OTTHUMG00000171092.1 189095 1133 19 ENSG00000258685.2 CTD-2315A10.2 chr14 59135488 59136421 - processed_pseudogene KNOWN OTTHUMG00000171093.2 934 934 1 ENSG00000258996.2 CTD-2315A10.1 chr14 59181593 59181940 + processed_pseudogene KNOWN OTTHUMG00000171094.2 348 348 1 ENSG00000100592.14 DAAM1 chr14 59188646 59371405 + protein_coding KNOWN OTTHUMG00000140326.3 182760 10712 97 ENSG00000252869.1 AL159140.1 chr14 59400023 59400151 + miRNA NOVEL NA 129 129 1 ENSG00000181619.11 GPR135 chr14 59429022 59465342 - protein_coding KNOWN OTTHUMG00000140325.2 36321 4977 8 ENSG00000126790.10 L3HYPDH chr14 59460363 59484430 - protein_coding KNOWN OTTHUMG00000028941.10 24068 3504 30 ENSG00000258782.3 RP11-701B16.2 chr14 59479274 59525437 - processed_transcript NOVEL OTTHUMG00000171095.1 46164 671 6 ENSG00000050130.16 JKAMP chr14 59484443 59505410 + protein_coding KNOWN OTTHUMG00000171054.3 20968 4350 83 ENSG00000231564.1 EIF4A1P11 chr1 179201705 179201926 + processed_pseudogene KNOWN OTTHUMG00000041097.1 222 222 1 ENSG00000151838.10 CCDC175 chr14 59504539 59576831 - protein_coding KNOWN OTTHUMG00000171096.2 72293 3245 53 ENSG00000139970.15 RTN1 chr14 59595976 59870966 - protein_coding KNOWN OTTHUMG00000028947.4 274991 6209 59 ENSG00000263629.1 MIR5586 chr14 59646962 59647020 - miRNA KNOWN NA 59 59 1 ENSG00000261120.1 RP11-62H20.1 chr14 59919423 59920339 - antisense NOVEL OTTHUMG00000175993.1 917 507 2 ENSG00000131951.9 LRRC9 chr14 59919713 60063559 + protein_coding KNOWN OTTHUMG00000028948.3 143847 5316 85 ENSG00000258553.4 RP11-16B13.1 chr14 59969116 60091783 - antisense NOVEL OTTHUMG00000171123.1 122668 572 8 ENSG00000126773.11 PCNXL4 chr14 60091911 60169133 + protein_coding KNOWN OTTHUMG00000150361.4 77223 22042 67 ENSG00000100612.12 DHRS7 chr14 60144120 60169856 - protein_coding KNOWN OTTHUMG00000140331.4 25737 3248 59 ENSG00000258896.1 SCOCP1 chr14 60158976 60159324 + processed_pseudogene KNOWN OTTHUMG00000171125.1 349 349 1 ENSG00000258563.2 PSMA3P chr14 60179382 60180016 + processed_pseudogene KNOWN OTTHUMG00000171126.2 635 635 1 ENSG00000225711.1 RP11-345I18.4 chr1 179220938 179222125 + processed_pseudogene KNOWN OTTHUMG00000041098.1 1188 721 2 ENSG00000242135.2 RPL17P2 chr14 60212462 60212912 - processed_pseudogene KNOWN OTTHUMG00000157939.2 451 451 1 ENSG00000254718.5 CTD-2184C24.2 chr14 60240121 60248765 - antisense NOVEL OTTHUMG00000166150.2 8645 3154 11 ENSG00000100614.16 PPM1A chr14 60245752 60299087 + protein_coding KNOWN OTTHUMG00000140333.5 53336 11860 39 ENSG00000258556.1 CTD-2568P8.1 chr14 60323236 60323907 + lincRNA NOVEL OTTHUMG00000171137.1 672 338 2 ENSG00000179008.7 C14orf39 chr14 60396469 60515543 - protein_coding KNOWN OTTHUMG00000140332.3 119075 3464 47 ENSG00000258427.3 RBM8B chr14 60397757 60398281 + processed_pseudogene KNOWN OTTHUMG00000171184.2 525 525 1 ENSG00000259169.1 GNRHR2P1 chr14 60398934 60400013 - unprocessed_pseudogene KNOWN OTTHUMG00000171185.1 1080 631 2 ENSG00000258692.2 SALL4P7 chr14 60493766 60496885 - transcribed_processed_pseudogene KNOWN OTTHUMG00000171186.2 3120 3120 1 ENSG00000184302.6 SIX6 chr14 60508951 60512850 + protein_coding KNOWN OTTHUMG00000152339.2 3900 2787 2 ENSG00000258670.1 RP11-1042B17.3 chr14 60515119 60554916 + antisense NOVEL OTTHUMG00000171187.1 39798 868 2 ENSG00000223794.1 COX5BP8 chr1 179255733 179256081 + processed_pseudogene KNOWN OTTHUMG00000041099.1 349 349 1 ENSG00000258764.1 RP11-1042B17.4 chr14 60544400 60544654 + transcribed_processed_pseudogene KNOWN OTTHUMG00000171188.1 255 255 1 ENSG00000244756.1 RP11-1042B17.1 chr14 60572024 60572311 - processed_pseudogene KNOWN OTTHUMG00000157943.1 288 288 1 ENSG00000241354.2 RP11-1042B17.2 chr14 60602146 60602533 - processed_pseudogene KNOWN OTTHUMG00000157955.2 388 388 1 ENSG00000258952.2 SALRNA1 chr14 60639216 60642589 + lincRNA KNOWN OTTHUMG00000171189.2 3374 2086 2 ENSG00000126778.8 SIX1 chr14 60643415 60658259 - protein_coding KNOWN OTTHUMG00000140334.5 14845 5430 11 ENSG00000100625.8 SIX4 chr14 60709528 60724348 - protein_coding KNOWN OTTHUMG00000028996.8 14821 6658 10 ENSG00000020426.9 MNAT1 chr14 60734742 60969953 + protein_coding KNOWN OTTHUMG00000152340.4 235212 3865 41 ENSG00000258445.3 RP11-307P22.1 chr14 60779978 60780595 + processed_pseudogene KNOWN OTTHUMG00000171291.3 618 618 1 ENSG00000258892.1 RP11-193F5.1 chr14 60879714 60982585 + processed_transcript NOVEL OTTHUMG00000171292.1 102872 200 2 ENSG00000258485.2 SRMP2 chr14 60919240 60920155 - processed_pseudogene KNOWN OTTHUMG00000171293.2 916 916 1 ENSG00000228191.1 RP11-345I18.6 chr1 179271116 179271266 - processed_pseudogene KNOWN OTTHUMG00000057651.1 151 151 1 ENSG00000126814.6 TRMT5 chr14 60971451 60981358 - protein_coding KNOWN OTTHUMG00000171294.2 9908 5692 9 ENSG00000258656.1 RP11-193F5.4 chr14 60972272 60972466 - processed_pseudogene KNOWN OTTHUMG00000171295.1 195 195 1 ENSG00000206870.1 RNU6-398P chr14 60974327 60974435 + snRNA KNOWN NA 109 109 1 ENSG00000139974.14 SLC38A6 chr14 60981114 61083733 + protein_coding KNOWN OTTHUMG00000140335.6 102620 5147 195 ENSG00000027075.12 PRKCH chr14 61187559 61550976 + protein_coding KNOWN OTTHUMG00000152341.4 363418 8809 136 ENSG00000182107.6 TMEM30B chr14 61277370 61281840 - protein_coding KNOWN OTTHUMG00000171426.1 4471 4471 5 ENSG00000247287.2 RP11-902B17.1 chr14 61298164 61322818 - antisense NOVEL OTTHUMG00000171532.1 24655 4852 5 ENSG00000258989.1 RP11-47I22.4 chr14 61529128 61657964 + protein_coding PUTATIVE OTTHUMG00000171533.1 128837 779 4 ENSG00000258926.1 RP11-47I22.1 chr14 61537508 61545287 - antisense NOVEL OTTHUMG00000171437.1 7780 593 2 ENSG00000250548.5 RP11-47I22.2 chr14 61556313 61570653 - lincRNA NOVEL OTTHUMG00000171534.1 14341 5148 9 ENSG00000057252.11 SOAT1 chr1 179293714 179358680 + protein_coding KNOWN OTTHUMG00000035253.2 64967 7005 53 ENSG00000232774.6 FLJ22447 chr14 61570540 61658696 + lincRNA NOVEL OTTHUMG00000171535.1 88157 2653 11 ENSG00000258777.1 HIF1A-AS1 chr14 61681041 61695823 - lincRNA NOVEL OTTHUMG00000171134.1 14783 652 2 ENSG00000100644.15 HIF1A chr14 61695513 61748259 + protein_coding KNOWN OTTHUMG00000140344.2 52747 5151 96 ENSG00000258667.1 HIF1A-AS2 chr14 61715558 61751097 - lincRNA NOVEL OTTHUMG00000171135.1 35540 533 3 ENSG00000258964.1 RP11-618G20.1 chr14 61734138 61776260 + processed_transcript NOVEL OTTHUMG00000171115.1 42123 720 5 ENSG00000023608.4 SNAPC1 chr14 61762357 61796428 + protein_coding KNOWN OTTHUMG00000140343.2 34072 2656 10 ENSG00000279633.1 RP11-442G21.2 chr14 61801713 61803634 + TEC KNOWN OTTHUMG00000172946.1 1922 1922 1 ENSG00000258882.1 CTD-2277K2.1 chr14 61811974 61970319 + lincRNA NOVEL OTTHUMG00000171138.1 158346 1062 5 ENSG00000258956.2 COX4I1P1 chr14 61831861 61832369 - processed_pseudogene KNOWN OTTHUMG00000171139.2 509 509 1 ENSG00000139973.14 SYT16 chr14 61995823 62112550 + protein_coding KNOWN OTTHUMG00000171106.2 116728 14067 17 ENSG00000116685.14 KIAA2013 chr1 11919591 11926428 - protein_coding KNOWN OTTHUMG00000002391.1 6838 3281 9 ENSG00000162779.19 AXDND1 chr1 179365720 179554735 + protein_coding KNOWN OTTHUMG00000035266.6 189016 6089 181 ENSG00000258842.1 RP11-355I22.5 chr14 62069518 62081154 - lincRNA NOVEL OTTHUMG00000171116.2 11637 322 3 ENSG00000258903.1 RP11-355I22.2 chr14 62103378 62117175 - lincRNA NOVEL OTTHUMG00000171107.1 13798 737 4 ENSG00000186369.8 LINC00643 chr14 62114353 62130962 + lincRNA NOVEL OTTHUMG00000171566.3 16610 4637 20 ENSG00000259142.1 LINC00644 chr14 62134149 62139973 - lincRNA NOVEL OTTHUMG00000171117.1 5825 295 2 ENSG00000270852.1 RP11-355I22.8 chr14 62150656 62152258 - unprocessed_pseudogene KNOWN OTTHUMG00000184536.1 1603 1066 2 ENSG00000258638.2 RP11-395B20.2 chr14 62514872 62515123 - processed_pseudogene KNOWN OTTHUMG00000171111.2 252 252 1 ENSG00000258877.2 RP11-395B20.1 chr14 62604113 62605717 - processed_pseudogene KNOWN OTTHUMG00000171112.2 1605 1605 1 ENSG00000140015.18 KCNH5 chr14 62699454 63102037 - protein_coding KNOWN OTTHUMG00000029041.5 402584 12320 39 ENSG00000258995.1 RP11-1112J20.1 chr14 63123007 63123201 + processed_pseudogene KNOWN OTTHUMG00000171113.1 195 195 1 ENSG00000259093.1 RP11-1112J20.2 chr14 63123033 63128214 - lincRNA NOVEL OTTHUMG00000171114.1 5182 814 2 ENSG00000224620.2 MEF2AP1 chr1 179447578 179448440 - processed_pseudogene KNOWN OTTHUMG00000035267.2 863 863 1 ENSG00000126785.11 RHOJ chr14 63204114 63293219 + protein_coding KNOWN OTTHUMG00000140342.4 89106 3793 16 ENSG00000265711.1 AL049871.1 chr14 63232715 63232812 - miRNA NOVEL NA 98 98 1 ENSG00000258943.1 RP11-696D21.2 chr14 63298126 63299547 - lincRNA NOVEL OTTHUMG00000171195.1 1422 880 2 ENSG00000179600.3 GPHB5 chr14 63312835 63318879 - protein_coding KNOWN OTTHUMG00000168678.3 6045 543 5 ENSG00000154001.12 PPP2R5E chr14 63371357 63543374 - protein_coding KNOWN OTTHUMG00000140341.3 172018 9188 77 ENSG00000281544.1 U6 chr14 63477774 63477839 + snRNA NOVEL NA 66 66 1 ENSG00000252800.1 SCARNA20 chr14 63479272 63479413 + scaRNA NOVEL NA 142 142 1 ENSG00000261242.1 CTD-2302E22.4 chr14 63543569 63544664 + antisense NOVEL OTTHUMG00000172963.1 1096 1096 1 ENSG00000205767.4 CTD-2302E22.1 chr14 63567958 63568308 + processed_pseudogene KNOWN OTTHUMG00000157958.2 351 351 1 ENSG00000270878.1 CTD-2302E22.5 chr14 63594031 63595291 - processed_pseudogene KNOWN OTTHUMG00000184525.1 1261 1261 1 ENSG00000236539.3 HNRNPA1P54 chr1 179447602 179457315 - processed_pseudogene KNOWN OTTHUMG00000035268.2 9714 9714 1 ENSG00000140006.10 WDR89 chr14 63597039 63641861 - protein_coding KNOWN OTTHUMG00000140340.4 44823 3209 10 ENSG00000258800.1 CTD-2302E22.2 chr14 63598874 63599248 + lincRNA NOVEL OTTHUMG00000171130.1 375 283 2 ENSG00000258645.2 HSPE1P2 chr14 63601509 63601814 + processed_pseudogene KNOWN OTTHUMG00000171131.2 306 306 1 ENSG00000202490.1 RNU6-597P chr14 63618043 63618144 + snRNA KNOWN NA 102 102 1 ENSG00000206822.1 Y_RNA chr14 63621760 63621871 + misc_RNA NOVEL NA 112 112 1 ENSG00000207172.1 RNU6-1162P chr14 63630678 63630781 + snRNA KNOWN NA 104 104 1 ENSG00000274015.1 CTD-2302E22.6 chr14 63642143 63642696 + lincRNA NOVEL OTTHUMG00000186885.1 554 554 1 ENSG00000200693.2 U3 chr14 63651296 63651499 - snoRNA NOVEL NA 204 204 1 ENSG00000126821.7 SGPP1 chr14 63684214 63728039 - protein_coding KNOWN OTTHUMG00000029080.3 43826 3312 3 ENSG00000258778.2 RP11-804M7.1 chr14 63734697 63735923 + processed_pseudogene KNOWN OTTHUMG00000171132.2 1227 1227 1 ENSG00000261250.1 RP11-545A16.1 chr1 179543201 179548922 - antisense NOVEL OTTHUMG00000035254.1 5722 3294 2 ENSG00000252749.1 RNU7-116P chr14 63736444 63736505 + snRNA KNOWN NA 62 62 1 ENSG00000258411.2 RP11-804M7.2 chr14 63762013 63762149 + processed_pseudogene KNOWN OTTHUMG00000171133.2 137 137 1 ENSG00000270912.1 RPS28P1 chr14 63808546 63808732 + processed_pseudogene KNOWN OTTHUMG00000184599.1 187 187 1 ENSG00000202182.1 Y_RNA chr14 63848261 63848362 - misc_RNA NOVEL NA 102 102 1 ENSG00000054654.14 SYNE2 chr14 63852983 64226433 + protein_coding KNOWN OTTHUMG00000140349.3 373451 31374 790 ENSG00000140009.17 ESR2 chr14 64084232 64338112 - protein_coding KNOWN OTTHUMG00000141306.4 253881 9337 102 ENSG00000221537.1 MIR548H1 chr14 64095024 64095125 - miRNA KNOWN NA 102 102 1 ENSG00000214770.2 RP11-544I20.2 chr14 64329431 64338599 - antisense NOVEL OTTHUMG00000171182.1 9169 3311 6 ENSG00000234911.1 TEX21P chr14 64346171 64374666 - unitary_pseudogene KNOWN OTTHUMG00000154262.1 28496 1476 6 ENSG00000258809.1 CTD-2555O16.1 chr14 64358768 64379318 - lincRNA NOVEL OTTHUMG00000171183.1 20551 572 4 ENSG00000116218.11 NPHS2 chr1 179550539 179575952 - protein_coding KNOWN OTTHUMG00000035252.1 25414 1874 15 ENSG00000271511.1 RP11-712C19.1 chr14 64361392 64361637 + processed_pseudogene KNOWN OTTHUMG00000184590.1 246 246 1 ENSG00000100714.14 MTHFD1 chr14 64388031 64463457 + protein_coding KNOWN OTTHUMG00000141309.4 75427 9377 138 ENSG00000258824.2 CTD-2555O16.2 chr14 64422935 64448557 - antisense NOVEL OTTHUMG00000171216.1 25623 550 2 ENSG00000272909.1 CTD-2555O16.4 chr14 64440369 64442238 - antisense NOVEL OTTHUMG00000185881.1 1870 1870 1 ENSG00000089775.10 ZBTB25 chr14 64449106 64505213 - protein_coding KNOWN OTTHUMG00000141310.3 56108 12229 15 ENSG00000179841.8 AKAP5 chr14 64465499 64474503 + protein_coding KNOWN OTTHUMG00000029634.4 9005 7512 3 ENSG00000126804.12 ZBTB1 chr14 64503712 64533690 + protein_coding KNOWN OTTHUMG00000171147.1 29979 5283 17 ENSG00000259116.1 RP11-973N13.4 chr14 64514154 64540368 - antisense NOVEL OTTHUMG00000171561.1 26215 558 4 ENSG00000259160.1 RP11-973N13.5 chr14 64535702 64535879 - processed_pseudogene KNOWN OTTHUMG00000171562.1 178 178 1 ENSG00000126803.9 HSPA2 chr14 64535905 64546173 + protein_coding KNOWN OTTHUMG00000141311.4 10269 5777 5 ENSG00000251875.1 RNU5F-2P chr1 179576268 179576349 + snRNA KNOWN NA 82 82 1 ENSG00000165807.6 PPP1R36 chr14 64549902 64589380 + protein_coding KNOWN OTTHUMG00000141316.3 39479 3093 44 ENSG00000259076.1 RP11-973N13.3 chr14 64552694 64596536 - antisense NOVEL OTTHUMG00000171563.1 43843 432 5 ENSG00000259010.1 RP11-973N13.2 chr14 64600243 64601644 - processed_pseudogene KNOWN OTTHUMG00000171564.1 1402 1402 1 ENSG00000126822.14 PLEKHG3 chr14 64704102 64750247 + protein_coding KNOWN OTTHUMG00000029671.9 46146 11910 67 ENSG00000070182.16 SPTB chr14 64746283 64879883 - protein_coding KNOWN OTTHUMG00000171550.5 133601 14772 161 ENSG00000277239.1 MIR7855 chr14 64785626 64785686 - miRNA KNOWN NA 61 61 1 ENSG00000279654.1 AL135745.1 chr14 64894339 64894713 + protein_coding KNOWN NA 375 375 1 ENSG00000252497.1 RPPH1-2P chr14 64909488 64909780 - ribozyme KNOWN NA 293 293 1 ENSG00000258289.6 CHURC1 chr14 64914361 64944591 + protein_coding KNOWN OTTHUMG00000170218.5 30231 5404 32 ENSG00000125954.11 CHURC1-FNTB chr14 64914485 65061803 + protein_coding KNOWN OTTHUMG00000170219.3 147319 2076 36 ENSG00000227141.2 RP11-545A16.3 chr1 179586705 179589175 + processed_pseudogene KNOWN OTTHUMG00000035255.2 2471 2471 1 ENSG00000176153.11 GPX2 chr14 64939152 64942905 - protein_coding KNOWN OTTHUMG00000171677.1 3754 1499 13 ENSG00000139998.13 RAB15 chr14 64945814 64972776 - protein_coding KNOWN OTTHUMG00000142810.5 26963 4379 37 ENSG00000257365.6 FNTB chr14 64986720 65062652 + protein_coding KNOWN OTTHUMG00000142811.5 75933 3948 48 ENSG00000272158.1 RP11-840I19.5 chr14 65003325 65003767 - antisense NOVEL OTTHUMG00000185569.1 443 443 1 ENSG00000125952.17 MAX chr14 65006174 65102695 - protein_coding KNOWN OTTHUMG00000142809.9 96522 4430 80 ENSG00000264620.1 AL139022.1 chr14 65014715 65014814 + miRNA NOVEL NA 100 100 1 ENSG00000266531.1 MIR4706 chr14 65044688 65044769 + miRNA KNOWN NA 82 82 1 ENSG00000259118.4 RP11-840I19.3 chr14 65082034 65094212 + antisense NOVEL OTTHUMG00000171594.1 12179 1377 12 ENSG00000222985.1 RNU2-14P chr14 65124352 65124542 - snRNA KNOWN NA 191 191 1 ENSG00000255002.1 CTD-2509G16.2 chr14 65212893 65222347 - lincRNA NOVEL OTTHUMG00000166151.1 9455 1442 4 ENSG00000261060.1 RP11-545A16.4 chr1 179590372 179591305 + sense_overlapping NOVEL OTTHUMG00000176142.2 934 934 1 ENSG00000258878.1 CTD-2509G16.3 chr14 65234515 65235101 - processed_pseudogene KNOWN OTTHUMG00000171167.1 587 587 1 ENSG00000258760.1 CTD-2509G16.5 chr14 65236480 65318790 - lincRNA NOVEL OTTHUMG00000171168.1 82311 1118 7 ENSG00000258613.1 RPL21P7 chr14 65266638 65267690 - processed_pseudogene KNOWN OTTHUMG00000171169.1 1053 483 2 ENSG00000214759.3 CTD-2509G16.1 chr14 65268829 65269098 + processed_pseudogene KNOWN OTTHUMG00000157962.1 270 270 1 ENSG00000259078.2 PTBP1P chr14 65279267 65281166 + processed_pseudogene KNOWN OTTHUMG00000171170.2 1900 1601 2 ENSG00000266740.1 MIR4708 chr14 65335117 65335183 - miRNA KNOWN NA 67 67 1 ENSG00000033170.15 FUT8 chr14 65410592 65744121 + protein_coding KNOWN OTTHUMG00000142818.2 333530 6700 86 ENSG00000276116.2 FUT8-AS1 chr14 65411170 65412690 - antisense KNOWN OTTHUMG00000186893.2 1521 1521 1 ENSG00000180662.8 RPL21P8 chr14 65467807 65468341 - processed_pseudogene KNOWN OTTHUMG00000157964.1 535 535 1 ENSG00000207781.1 MIR625 chr14 65471102 65471186 + miRNA KNOWN NA 85 85 1 ENSG00000162782.14 TDRD5 chr1 179591613 179691272 + protein_coding KNOWN OTTHUMG00000035259.1 99660 4256 61 ENSG00000258980.1 EIF1AXP2 chr14 65528830 65529574 - processed_pseudogene KNOWN OTTHUMG00000171171.1 745 413 2 ENSG00000258629.1 CTD-2014B16.1 chr14 65879592 65881070 - processed_pseudogene KNOWN OTTHUMG00000171174.1 1479 1479 1 ENSG00000258960.1 CTD-2014B16.2 chr14 65900932 65901451 - processed_pseudogene KNOWN OTTHUMG00000171175.1 520 520 1 ENSG00000258847.1 CTD-2014B16.3 chr14 65957297 66004523 - lincRNA NOVEL OTTHUMG00000171176.2 47227 773 4 ENSG00000277651.1 CTD-2014B16.5 chr14 65986967 65987447 - sense_intronic NOVEL OTTHUMG00000188632.1 481 481 1 ENSG00000238876.1 AL391261.1 chr14 66011641 66011733 - miRNA NOVEL NA 93 93 1 ENSG00000224861.1 YBX1P1 chr14 66012830 66013789 - processed_pseudogene KNOWN OTTHUMG00000171177.1 960 960 1 ENSG00000258502.4 RP11-783L4.1 chr14 66111581 66125847 + lincRNA NOVEL OTTHUMG00000171178.1 14267 1214 18 ENSG00000200860.1 Y_RNA chr14 66177527 66177635 - misc_RNA NOVEL NA 109 109 1 ENSG00000258561.1 RP11-72M17.1 chr14 66212810 66509394 - lincRNA NOVEL OTTHUMG00000171191.1 296585 1797 11 ENSG00000221547.1 AL359853.1 chr1 179710250 179710346 - miRNA NOVEL NA 97 97 1 ENSG00000196553.12 LINC00238 chr14 66486354 66498553 + processed_transcript KNOWN OTTHUMG00000029779.7 12200 1417 48 ENSG00000171723.14 GPHN chr14 66507407 67181803 + protein_coding KNOWN OTTHUMG00000029785.5 674397 6007 161 ENSG00000281779.1 AL139295.1 chr14 66597716 66597794 - miRNA NOVEL NA 79 79 1 ENSG00000258796.1 CTD-2560C21.1 chr14 66760532 66761018 + processed_pseudogene KNOWN OTTHUMG00000171218.1 487 487 1 ENSG00000258490.1 RP11-862P13.1 chr14 66969038 66969816 - antisense NOVEL OTTHUMG00000171219.1 779 514 2 ENSG00000172717.14 FAM71D chr14 67189393 67228550 + protein_coding KNOWN OTTHUMG00000142819.6 39158 4399 63 ENSG00000258988.1 RP11-125H8.1 chr14 67199062 67200327 + processed_pseudogene KNOWN OTTHUMG00000171221.1 1266 1266 1 ENSG00000072415.7 MPP5 chr14 67241109 67335819 + protein_coding KNOWN OTTHUMG00000171243.1 94711 8743 44 ENSG00000100554.10 ATP6V1D chr14 67294371 67360265 - protein_coding KNOWN OTTHUMG00000171244.1 65895 4251 84 ENSG00000199755.1 Y_RNA chr14 67340068 67340176 + misc_RNA NOVEL NA 109 109 1 ENSG00000083444.15 PLOD1 chr1 11934205 11975538 + protein_coding KNOWN OTTHUMG00000002393.3 41334 5320 62 ENSG00000243062.4 RP11-12M5.1 chr1 179730217 179742697 + lincRNA NOVEL OTTHUMG00000035261.1 12481 629 4 ENSG00000134001.11 EIF2S1 chr14 67359997 67386516 + protein_coding KNOWN OTTHUMG00000029800.4 26520 5651 33 ENSG00000100558.7 PLEK2 chr14 67386983 67412200 - protein_coding KNOWN OTTHUMG00000171247.2 25218 1603 34 ENSG00000265993.1 MIR5694 chr14 67441855 67441930 - miRNA KNOWN NA 76 76 1 ENSG00000198133.7 TMEM229B chr14 67447084 67533739 - protein_coding KNOWN OTTHUMG00000171270.2 86656 6377 31 ENSG00000054690.12 PLEKHH1 chr14 67533301 67589612 + protein_coding KNOWN OTTHUMG00000171272.3 56312 10817 124 ENSG00000100564.7 PIGH chr14 67581955 67600287 - protein_coding KNOWN OTTHUMG00000171806.2 18333 2915 43 ENSG00000259502.1 RP11-643G16.3 chr14 67610986 67613864 + processed_pseudogene KNOWN OTTHUMG00000172131.1 2879 619 3 ENSG00000259648.1 RP11-643G16.4 chr14 67614929 67616626 + transcribed_processed_pseudogene KNOWN OTTHUMG00000172132.1 1698 1698 2 ENSG00000281228.1 AL132640.1 chr14 67616903 67617084 + pseudogene NOVEL NA 182 177 2 ENSG00000201529.1 Y_RNA chr14 67617302 67617415 - misc_RNA NOVEL NA 114 114 1 ENSG00000143340.6 FAM163A chr1 179743163 179816198 + protein_coding KNOWN OTTHUMG00000035262.1 73036 2909 5 ENSG00000081181.6 ARG2 chr14 67619798 67651720 + protein_coding KNOWN OTTHUMG00000171807.2 31923 2418 21 ENSG00000100568.9 VTI1B chr14 67647075 67674831 - protein_coding KNOWN OTTHUMG00000171251.3 27757 5789 25 ENSG00000258626.2 COX7A2P1 chr14 67652300 67652614 - processed_pseudogene KNOWN OTTHUMG00000171755.2 315 315 1 ENSG00000272253.1 5S_rRNA chr14 67657105 67657211 - rRNA NOVEL NA 107 107 1 ENSG00000258466.4 RP11-1012A1.4 chr14 67659820 67690367 - protein_coding NOVEL OTTHUMG00000171262.3 30548 804 16 ENSG00000072042.11 RDH11 chr14 67676801 67695814 - protein_coding KNOWN OTTHUMG00000171196.5 19014 5518 53 ENSG00000139988.8 RDH12 chr14 67701886 67734452 + protein_coding KNOWN OTTHUMG00000170032.1 32567 2356 21 ENSG00000241542.3 RN7SL369P chr14 67705954 67706252 + misc_RNA KNOWN NA 299 299 1 ENSG00000258618.2 RPL21P9 chr14 67714545 67715204 + processed_pseudogene KNOWN OTTHUMG00000171273.3 660 474 2 ENSG00000072121.14 ZFYVE26 chr14 67727374 67816590 - protein_coding KNOWN OTTHUMG00000171274.4 89217 15706 211 ENSG00000229407.4 RP11-12M5.3 chr1 179816184 179818191 - antisense NOVEL OTTHUMG00000035263.1 2008 601 4 ENSG00000271697.1 RP11-1012A1.10 chr14 67735195 67735350 + processed_pseudogene KNOWN OTTHUMG00000184587.1 156 156 1 ENSG00000239820.3 RN7SL213P chr14 67751228 67751544 - misc_RNA KNOWN NA 317 317 1 ENSG00000258759.1 RP11-1012A1.7 chr14 67799004 67799609 + processed_pseudogene KNOWN OTTHUMG00000171283.1 606 606 1 ENSG00000182185.17 RAD51B chr14 67819779 68730218 + protein_coding KNOWN OTTHUMG00000157530.5 910440 7477 141 ENSG00000274666.1 CTD-2566J3.2 chr14 68113706 68114144 - unprocessed_pseudogene KNOWN OTTHUMG00000187838.1 439 439 1 ENSG00000258837.1 CTD-2566J3.1 chr14 68125004 68130196 - antisense NOVEL OTTHUMG00000171756.1 5193 537 2 ENSG00000244677.3 RN7SL706P chr14 68149617 68149908 - misc_RNA KNOWN NA 292 292 1 ENSG00000243546.3 RN7SL108P chr14 68236243 68236539 - misc_RNA KNOWN NA 297 297 1 ENSG00000240210.3 RP11-204K16.1 chr14 68338728 68339528 - processed_pseudogene KNOWN OTTHUMG00000157967.1 801 801 1 ENSG00000258477.1 PPIAP6 chr14 68421698 68422196 - processed_pseudogene KNOWN OTTHUMG00000171757.1 499 499 1 ENSG00000231966.1 RP11-12M5.4 chr1 179829609 179836124 - lincRNA NOVEL OTTHUMG00000035264.1 6516 353 2 ENSG00000259038.1 CTD-2325P2.4 chr14 68627166 68628445 - antisense NOVEL OTTHUMG00000171758.1 1280 279 2 ENSG00000258623.1 CTD-2325P2.3 chr14 68683411 68685565 - antisense NOVEL OTTHUMG00000171759.1 2155 461 2 ENSG00000242941.1 CTD-2325P2.2 chr14 68693090 68693583 + processed_pseudogene KNOWN OTTHUMG00000157970.2 494 494 1 ENSG00000207089.1 RNU6-921P chr14 68735922 68736028 - snRNA KNOWN NA 107 107 1 ENSG00000185650.9 ZFP36L1 chr14 68787660 68796253 - protein_coding KNOWN OTTHUMG00000171385.1 8594 5160 14 ENSG00000270975.1 MAGOH3P chr14 68861762 68862525 + unprocessed_pseudogene KNOWN OTTHUMG00000184601.1 764 447 2 ENSG00000258565.1 BLZF2P chr14 68867857 68869951 - unprocessed_pseudogene KNOWN OTTHUMG00000171760.1 2095 1130 4 ENSG00000072110.12 ACTN1 chr14 68874143 68979440 - protein_coding KNOWN OTTHUMG00000171386.5 105298 10626 195 ENSG00000258967.1 HMGN1P3 chr14 68887785 68888084 - processed_pseudogene KNOWN OTTHUMG00000171667.1 300 300 1 ENSG00000258531.2 BANF1P1 chr14 68936602 68936864 + processed_pseudogene KNOWN OTTHUMG00000171668.2 263 263 1 ENSG00000169905.11 TOR1AIP2 chr1 179839967 179877803 - protein_coding KNOWN OTTHUMG00000035265.3 37837 18876 23 ENSG00000259062.2 ACTN1-AS1 chr14 68979682 68987463 + antisense KNOWN OTTHUMG00000171698.2 7782 936 6 ENSG00000242293.1 RP11-226F19.1 chr14 69023150 69023308 - processed_pseudogene KNOWN OTTHUMG00000157974.2 159 159 1 ENSG00000139990.16 DCAF5 chr14 69050881 69153150 - protein_coding KNOWN OTTHUMG00000171699.2 102270 8295 65 ENSG00000259165.1 DDX18P1 chr14 69083398 69085389 + processed_pseudogene KNOWN OTTHUMG00000171761.1 1992 1992 1 ENSG00000206768.1 Y_RNA chr14 69143852 69143953 - misc_RNA NOVEL NA 102 102 1 ENSG00000276063.1 RP11-817G13.3 chr14 69154311 69154804 + lincRNA NOVEL OTTHUMG00000186903.1 494 494 1 ENSG00000258957.1 RP11-363J20.1 chr14 69183020 69214092 - lincRNA NOVEL OTTHUMG00000171321.1 31073 2364 8 ENSG00000081177.17 EXD2 chr14 69191511 69244020 + protein_coding KNOWN OTTHUMG00000154496.3 52510 6263 89 ENSG00000258520.1 RP11-363J20.2 chr14 69239166 69260567 - lincRNA NOVEL OTTHUMG00000171322.1 21402 578 3 ENSG00000100626.15 GALNT16 chr14 69259277 69357033 + protein_coding KNOWN OTTHUMG00000171231.4 97757 10802 82 ENSG00000272906.1 RP11-533E19.7 chr1 179881607 179882595 - lincRNA NOVEL OTTHUMG00000186037.1 989 989 1 ENSG00000280073.1 CTD-2525P14.5 chr14 69357010 69359308 + TEC KNOWN OTTHUMG00000172967.1 2299 2299 1 ENSG00000100632.9 ERH chr14 69380123 69398627 - protein_coding KNOWN OTTHUMG00000171323.2 18505 1446 12 ENSG00000029364.10 SLC39A9 chr14 69398015 69462388 + protein_coding KNOWN OTTHUMG00000171232.4 64374 7136 68 ENSG00000175985.9 PLEKHD1 chr14 69484692 69531551 + protein_coding KNOWN OTTHUMG00000171233.3 46860 8097 15 ENSG00000244237.1 RP11-1046B16.1 chr14 69561019 69561470 - processed_pseudogene KNOWN OTTHUMG00000157979.2 452 452 1 ENSG00000267909.2 CCDC177 chr14 69569816 69574837 - protein_coding KNOWN OTTHUMG00000187379.1 5022 4131 2 ENSG00000100647.7 SUSD6 chr14 69611596 69715142 + protein_coding KNOWN OTTHUMG00000171234.2 103547 5830 10 ENSG00000273797.1 RP11-1046B16.3 chr14 69617122 69617648 + sense_intronic NOVEL OTTHUMG00000188631.1 527 527 1 ENSG00000100650.14 SRSF5 chr14 69726900 69772005 + protein_coding KNOWN OTTHUMG00000171235.5 45106 5357 106 ENSG00000100652.4 SLC10A1 chr14 69775417 69797289 - protein_coding KNOWN OTTHUMG00000171236.1 21873 2049 5 ENSG00000143337.17 TOR1AIP1 chr1 179882042 179925000 + protein_coding KNOWN OTTHUMG00000035257.9 42959 9615 101 ENSG00000221060.1 SNORA11 chr14 69804203 69804331 - snoRNA NOVEL NA 129 129 1 ENSG00000198732.9 SMOC1 chr14 69854131 70032366 + protein_coding KNOWN OTTHUMG00000171237.1 178236 4369 35 ENSG00000242071.3 RPL7AP6 chr14 69885340 69886140 - processed_pseudogene KNOWN OTTHUMG00000157981.1 801 801 1 ENSG00000100678.17 SLC8A3 chr14 70044217 70189070 - protein_coding KNOWN OTTHUMG00000152342.2 144854 8444 61 ENSG00000258422.4 RP11-486O13.2 chr14 70187123 70230187 + antisense NOVEL OTTHUMG00000171324.1 43065 1109 12 ENSG00000274330.1 RP11-486O13.5 chr14 70230224 70232426 + unprocessed_pseudogene KNOWN OTTHUMG00000188125.1 2203 2203 1 ENSG00000270610.1 RP11-486O13.3 chr14 70234495 70235095 + processed_pseudogene KNOWN OTTHUMG00000184428.1 601 601 1 ENSG00000235812.4 ADAM21P1 chr14 70245491 70247801 - transcribed_processed_pseudogene KNOWN OTTHUMG00000166565.3 2311 2311 2 ENSG00000259033.1 RP11-718G2.5 chr14 70275296 70291859 + lincRNA NOVEL OTTHUMG00000171325.1 16564 448 2 ENSG00000133983.13 COX16 chr14 70325081 70359731 - protein_coding KNOWN OTTHUMG00000171238.3 34651 1863 13 ENSG00000264916.2 RN7SL230P chr1 179900262 179900564 + misc_RNA KNOWN NA 303 303 1 ENSG00000258644.4 SYNJ2BP-COX16 chr14 70326064 70417074 - protein_coding KNOWN OTTHUMG00000171239.2 91011 1404 25 ENSG00000222640.1 RNU2-51P chr14 70360892 70361088 + snRNA KNOWN NA 197 197 1 ENSG00000213463.4 SYNJ2BP chr14 70366496 70417061 - protein_coding KNOWN OTTHUMG00000171240.2 50566 7031 7 ENSG00000257759.2 RP11-486O13.4 chr14 70425812 70547464 - lincRNA NOVEL OTTHUMG00000171327.1 121653 565 3 ENSG00000139985.6 ADAM21 chr14 70452157 70459899 + protein_coding KNOWN OTTHUMG00000171328.3 7743 2658 2 ENSG00000259158.2 ADAM20P1 chr14 70468881 70483756 - lincRNA NOVEL OTTHUMG00000171329.1 14876 3034 4 ENSG00000252263.1 RNU6-659P chr14 70496107 70496210 + snRNA KNOWN NA 104 104 1 ENSG00000134007.3 ADAM20 chr14 70522358 70535015 - protein_coding KNOWN OTTHUMG00000167548.2 12658 2795 2 ENSG00000274397.1 CTD-2540L5.9 chr14 70556206 70557478 + unprocessed_pseudogene KNOWN OTTHUMG00000187841.1 1273 1016 2 ENSG00000133997.10 MED6 chr14 70581257 70600690 - protein_coding KNOWN OTTHUMG00000171252.2 19434 4219 70 ENSG00000261831.2 RP11-533E19.2 chr1 179926641 179941796 - lincRNA NOVEL OTTHUMG00000035258.2 15156 447 3 ENSG00000259115.1 CTD-2540L5.5 chr14 70593314 70641204 - lincRNA NOVEL OTTHUMG00000171330.1 47891 611 5 ENSG00000258951.1 KRT18P7 chr14 70594552 70595770 + processed_pseudogene KNOWN OTTHUMG00000171331.1 1219 1219 1 ENSG00000245466.1 CTD-2540L5.6 chr14 70608798 70641298 - lincRNA NOVEL OTTHUMG00000171332.1 32501 2941 3 ENSG00000240837.3 RN7SL77P chr14 70610086 70610379 + misc_RNA KNOWN NA 294 294 1 ENSG00000133985.2 TTC9 chr14 70641787 70675360 + protein_coding KNOWN OTTHUMG00000172133.1 33574 5217 3 ENSG00000258689.1 LINC01269 chr14 70698698 70712153 + lincRNA NOVEL OTTHUMG00000171248.1 13456 602 4 ENSG00000006432.14 MAP3K9 chr14 70722526 70809534 - protein_coding KNOWN OTTHUMG00000171249.3 87009 12386 72 ENSG00000280875.1 AC004816.1 chr14 70769486 70769621 - miRNA NOVEL NA 136 136 1 ENSG00000259153.1 RP6-65G23.3 chr14 70810205 70815403 + lincRNA NOVEL OTTHUMG00000171250.1 5199 716 4 ENSG00000275630.1 RP6-65G23.5 chr14 70822004 70823984 + lincRNA NOVEL OTTHUMG00000186907.1 1981 284 2 ENSG00000260360.1 RP11-533E19.5 chr1 179953184 179954440 - lincRNA NOVEL OTTHUMG00000176152.1 1257 1257 1 ENSG00000258431.1 RP1-292L20.2 chr14 70858844 70859429 - processed_pseudogene KNOWN OTTHUMG00000171284.3 586 586 1 ENSG00000274818.1 RP1-292L20.3 chr14 70906657 70907111 - lincRNA NOVEL OTTHUMG00000186911.2 455 455 1 ENSG00000100731.14 PCNX chr14 70907405 71115382 + protein_coding KNOWN OTTHUMG00000171242.6 207978 16715 149 ENSG00000258930.1 RP5-1163L11.2 chr14 71031686 71031970 - transcribed_processed_pseudogene KNOWN OTTHUMG00000171286.1 285 285 1 ENSG00000258966.1 GTF3AP2 chr14 71044375 71044640 - transcribed_processed_pseudogene KNOWN OTTHUMG00000171287.2 266 266 1 ENSG00000258571.1 PTTG4P chr14 71085482 71085833 - processed_pseudogene KNOWN OTTHUMG00000171288.2 352 352 1 ENSG00000269927.1 RP6-91H8.3 chr14 71141125 71143253 - lincRNA NOVEL OTTHUMG00000172968.1 2129 2129 1 ENSG00000259907.1 RP6-91H8.2 chr14 71181456 71182106 + lincRNA NOVEL OTTHUMG00000172756.1 651 651 1 ENSG00000258517.1 RP6-91H8.1 chr14 71212633 71218216 + lincRNA NOVEL OTTHUMG00000171281.1 5584 721 2 ENSG00000269945.1 RP6-91H8.5 chr14 71219100 71222724 + lincRNA NOVEL OTTHUMG00000183951.1 3625 3625 1 ENSG00000116688.15 MFN2 chr1 11980181 12013514 + protein_coding KNOWN OTTHUMG00000002392.6 33334 4973 52 ENSG00000135837.14 CEP350 chr1 179954738 180114880 + protein_coding KNOWN OTTHUMG00000035269.3 160143 14301 95 ENSG00000259146.3 RP1-261D10.2 chr14 71292729 71321814 - antisense NOVEL OTTHUMG00000171342.2 29086 973 6 ENSG00000197555.8 SIPA1L1 chr14 71320449 71741229 + protein_coding KNOWN OTTHUMG00000171282.4 420781 12412 169 ENSG00000259079.1 RP1-261D10.1 chr14 71330342 71330738 - processed_pseudogene KNOWN OTTHUMG00000171343.1 397 397 1 ENSG00000207444.1 SNORD56B chr14 71398337 71398407 + snoRNA KNOWN NA 71 71 1 ENSG00000242330.3 RN7SL683P chr14 71448689 71448958 + misc_RNA KNOWN NA 270 270 1 ENSG00000266869.1 RP6-114E22.1 chr14 71848606 71908430 + lincRNA NOVEL OTTHUMG00000179238.1 59825 397 2 ENSG00000182732.15 RGS6 chr14 71932439 72566529 + protein_coding KNOWN OTTHUMG00000171340.3 634091 8937 261 ENSG00000280188.1 AC005477.1 chr14 71965306 71966899 + protein_coding KNOWN NA 1594 1594 1 ENSG00000200298.1 Y_RNA chr14 72022407 72022516 - misc_RNA NOVEL NA 110 110 1 ENSG00000275829.1 AC005227.1 chr14 72070845 72070915 + miRNA NOVEL NA 71 71 1 ENSG00000235145.2 RP11-533E19.3 chr1 179968686 179969506 + processed_pseudogene KNOWN OTTHUMG00000035260.2 821 821 1 ENSG00000273830.1 MIR7843 chr14 72516820 72516898 + miRNA KNOWN NA 79 79 1 ENSG00000258871.1 RP3-514A23.2 chr14 72552580 72595125 - lincRNA NOVEL OTTHUMG00000171341.1 42546 654 3 ENSG00000205683.10 DPF3 chr14 72619296 72894116 - protein_coding KNOWN OTTHUMG00000171364.2 274821 6889 103 ENSG00000206751.1 Y_RNA chr14 72853224 72853331 - misc_RNA NOVEL NA 108 108 1 ENSG00000119599.15 DCAF4 chr14 72926332 72959703 + protein_coding KNOWN OTTHUMG00000160542.3 33372 5581 119 ENSG00000176043.5 RP1-146I3.1 chr14 72929612 72929930 - processed_pseudogene KNOWN OTTHUMG00000157983.1 319 319 1 ENSG00000259015.1 RP11-109N23.6 chr14 72960595 72961993 + processed_pseudogene KNOWN OTTHUMG00000171422.2 1399 289 2 ENSG00000239544.1 RP11-109N23.1 chr14 72963645 72964008 - processed_pseudogene KNOWN OTTHUMG00000157987.1 364 364 1 ENSG00000165861.12 ZFYVE1 chr14 72969451 73027212 - protein_coding KNOWN OTTHUMG00000171365.1 57762 5306 68 ENSG00000241487.3 RN7SL586P chr14 73040619 73040914 - misc_RNA KNOWN NA 296 296 1 ENSG00000223450.1 RP11-52I18.1 chr1 180000438 180000808 - processed_pseudogene KNOWN OTTHUMG00000057653.1 371 371 1 ENSG00000258813.2 RP11-109N23.4 chr14 73057925 73059415 - antisense NOVEL OTTHUMG00000171423.2 1491 1000 2 ENSG00000119707.12 RBM25 chr14 73058436 73123898 + protein_coding KNOWN OTTHUMG00000167540.2 65463 11859 127 ENSG00000258448.1 RP11-109N23.5 chr14 73068108 73068618 - processed_pseudogene KNOWN OTTHUMG00000171424.1 511 511 1 ENSG00000080815.17 PSEN1 chr14 73136418 73223691 + protein_coding KNOWN OTTHUMG00000141279.16 87274 9947 161 ENSG00000259109.1 RP4-687K1.2 chr14 73189763 73190004 + processed_pseudogene KNOWN OTTHUMG00000171549.1 242 242 1 ENSG00000274991.1 AC004846.1 chr14 73208378 73208463 - miRNA NOVEL NA 86 86 1 ENSG00000100767.14 PAPLN chr14 73237497 73274640 + protein_coding KNOWN OTTHUMG00000171366.4 37144 7699 161 ENSG00000258376.2 RP4-647C14.2 chr14 73242651 73245979 - antisense NOVEL OTTHUMG00000171434.2 3329 3050 2 ENSG00000252839.1 RNU6-419P chr14 73246818 73246880 - snRNA KNOWN NA 63 63 1 ENSG00000258944.1 RP4-647C14.3 chr14 73272182 73274081 - antisense NOVEL OTTHUMG00000171435.1 1900 777 3 ENSG00000261817.1 RP11-502H18.2 chr1 180117140 180123890 - lincRNA NOVEL OTTHUMG00000035251.1 6751 506 3 ENSG00000133961.18 NUMB chr14 73275107 73463642 - protein_coding KNOWN OTTHUMG00000171436.13 188536 10760 221 ENSG00000251393.3 RP1-240K6.3 chr14 73462423 73477175 + processed_transcript NOVEL OTTHUMG00000171606.2 14753 680 5 ENSG00000187105.7 HEATR4 chr14 73478484 73558947 - protein_coding KNOWN OTTHUMG00000171602.4 80464 4209 48 ENSG00000170468.7 C14orf169 chr14 73490964 73493392 + protein_coding KNOWN OTTHUMG00000166530.5 2429 2429 1 ENSG00000258443.1 RP3-414A15.11 chr14 73517233 73520648 - sense_intronic NOVEL OTTHUMG00000171675.1 3416 937 2 ENSG00000258695.2 RP3-414A15.2 chr14 73522878 73530610 + antisense NOVEL OTTHUMG00000171603.2 7733 519 2 ENSG00000184227.6 ACOT1 chr14 73537114 73543794 + protein_coding KNOWN OTTHUMG00000171607.1 6681 1713 6 ENSG00000258408.1 NT5CP2 chr14 73539221 73539781 - processed_pseudogene KNOWN OTTHUMG00000171604.1 561 561 1 ENSG00000119673.13 ACOT2 chr14 73567620 73575658 + protein_coding KNOWN OTTHUMG00000171608.4 8039 2393 16 ENSG00000258524.1 NT5CP1 chr14 73571159 73571667 - processed_pseudogene KNOWN OTTHUMG00000171605.1 509 509 1 ENSG00000264286.2 AL390718.1 chr1 180139521 180139633 + miRNA NOVEL NA 113 113 1 ENSG00000279026.1 RP3-414A15.12 chr14 73580694 73582918 + TEC KNOWN OTTHUMG00000172970.1 2225 2225 1 ENSG00000177465.4 ACOT4 chr14 73591706 73596496 + protein_coding KNOWN OTTHUMG00000169485.2 4791 2362 3 ENSG00000205669.2 ACOT6 chr14 73610945 73619888 + protein_coding KNOWN OTTHUMG00000171609.1 8944 1183 6 ENSG00000258603.3 RP3-414A15.10 chr14 73616700 73633941 - antisense NOVEL OTTHUMG00000171669.3 17242 919 4 ENSG00000258972.1 NDUFB8P1 chr14 73631475 73632019 + processed_pseudogene KNOWN OTTHUMG00000171641.1 545 545 1 ENSG00000119661.13 DNAL1 chr14 73644875 73703732 + protein_coding KNOWN OTTHUMG00000171642.6 58858 8884 59 ENSG00000251907.1 RNU6-240P chr14 73659564 73659660 - snRNA KNOWN NA 97 97 1 ENSG00000258660.1 RP4-693M11.3 chr14 73698103 73700351 - antisense NOVEL OTTHUMG00000171670.1 2249 693 2 ENSG00000176903.4 PNMA1 chr14 73711783 73714372 - protein_coding KNOWN OTTHUMG00000169183.1 2590 2590 1 ENSG00000156030.11 ELMSAN1 chr14 73715122 73790285 - protein_coding KNOWN OTTHUMG00000150359.1 75164 13484 80 ENSG00000116260.15 QSOX1 chr1 180154834 180204030 + protein_coding KNOWN OTTHUMG00000035256.3 49197 9311 35 ENSG00000264741.1 MIR4505 chr14 73758747 73758819 + miRNA KNOWN NA 73 73 1 ENSG00000259065.1 RP5-1021I20.1 chr14 73787360 73803270 + antisense NOVEL OTTHUMG00000171253.1 15911 688 5 ENSG00000258586.1 RP5-1021I20.2 chr14 73822559 73830135 - lincRNA NOVEL OTTHUMG00000171254.1 7577 1174 2 ENSG00000270576.1 RP5-1021I20.7 chr14 73840520 73840609 - processed_pseudogene KNOWN OTTHUMG00000184539.1 90 90 1 ENSG00000140043.10 PTGR2 chr14 73851844 73886827 + protein_coding KNOWN OTTHUMG00000171255.3 34984 8072 54 ENSG00000258653.3 RP5-1021I20.4 chr14 73851971 73932278 + protein_coding KNOWN OTTHUMG00000171256.2 80308 3695 22 ENSG00000223300.1 Y_RNA chr14 73858061 73858165 - misc_RNA NOVEL NA 105 105 1 ENSG00000273711.1 RP5-1021I20.8 chr14 73885392 73885555 - antisense NOVEL OTTHUMG00000186965.1 164 164 1 ENSG00000119725.16 ZNF410 chr14 73886617 73932511 + protein_coding KNOWN OTTHUMG00000171257.3 45895 6461 172 ENSG00000258891.1 RP5-1021I20.5 chr14 73896164 73938114 - antisense NOVEL OTTHUMG00000171258.1 41951 3953 8 ENSG00000121454.5 LHX4 chr1 180230286 180278982 + protein_coding KNOWN OTTHUMG00000035115.3 48697 6061 12 ENSG00000270140.1 RP5-1021I20.6 chr14 73905267 73905636 + sense_intronic NOVEL OTTHUMG00000184057.1 370 370 1 ENSG00000199472.1 Y_RNA chr14 73906316 73906427 - misc_RNA NOVEL NA 112 112 1 ENSG00000156050.7 FAM161B chr14 73931501 73950414 - protein_coding KNOWN OTTHUMG00000171259.1 18914 5056 13 ENSG00000119723.14 COQ6 chr14 73949926 73963670 + protein_coding KNOWN OTTHUMG00000171260.2 13745 6686 140 ENSG00000187097.11 ENTPD5 chr14 73958010 74019399 - protein_coding KNOWN OTTHUMG00000171201.2 61390 10379 60 ENSG00000279461.1 AC005480.1 chr14 74003369 74003777 + protein_coding KNOWN NA 409 409 1 ENSG00000119636.14 CCDC176 chr14 74019353 74082863 + protein_coding KNOWN OTTHUMG00000171202.4 63511 4620 46 ENSG00000119711.11 ALDH6A1 chr14 74056850 74084493 - protein_coding KNOWN OTTHUMG00000171203.1 27644 6680 57 ENSG00000205659.9 LIN52 chr14 74084796 74201235 + protein_coding KNOWN OTTHUMG00000171204.3 116440 3692 26 ENSG00000239910.3 RN7SL530P chr14 74174456 74174753 + misc_RNA KNOWN NA 298 298 1 ENSG00000230124.5 LHX4-AS1 chr1 180269653 180502954 - protein_coding KNOWN OTTHUMG00000035117.3 233302 7512 31 ENSG00000258513.1 RP5-892G5.2 chr14 74192589 74192823 + transcribed_processed_pseudogene KNOWN OTTHUMG00000171205.1 235 235 1 ENSG00000119614.2 VSX2 chr14 74239472 74262738 + protein_coding KNOWN OTTHUMG00000171206.1 23267 2995 5 ENSG00000119688.19 ABCD4 chr14 74285423 74303056 - protein_coding KNOWN OTTHUMG00000171207.1 17634 8769 201 ENSG00000258559.2 AC005519.4 chr14 74289127 74294425 - sense_overlapping NOVEL OTTHUMG00000149960.4 5299 1367 2 ENSG00000133980.4 VRTN chr14 74303069 74360008 + protein_coding KNOWN OTTHUMG00000171208.1 56940 3736 5 ENSG00000258737.1 SUB1P2 chr14 74305425 74306063 + translated_processed_pseudogene KNOWN OTTHUMG00000171209.1 639 266 2 ENSG00000177776.8 RPS2P2 chr14 74377818 74378418 - processed_pseudogene KNOWN OTTHUMG00000157990.2 601 601 1 ENSG00000183379.7 SYNDIG1L chr14 74405893 74426102 - protein_coding KNOWN OTTHUMG00000171210.1 20210 2612 9 ENSG00000270000.1 RP3-449M8.9 chr14 74471930 74472360 - lincRNA NOVEL OTTHUMG00000184116.1 431 431 1 ENSG00000259005.1 RP3-449M8.6 chr14 74474007 74474864 - lincRNA NOVEL OTTHUMG00000171211.1 858 589 2 ENSG00000281572.1 U6 chr1 180349158 180349251 - snRNA NOVEL NA 94 94 1 ENSG00000119655.7 NPC2 chr14 74476192 74494177 - protein_coding KNOWN OTTHUMG00000171212.1 17986 2749 41 ENSG00000265649.1 MIR4709 chr14 74480133 74480204 - miRNA KNOWN NA 72 72 1 ENSG00000258769.1 RAP1AP chr14 74482985 74483435 + processed_pseudogene KNOWN OTTHUMG00000171213.1 451 451 1 ENSG00000165898.12 ISCA2 chr14 74493720 74497106 + protein_coding KNOWN OTTHUMG00000171214.1 3387 3061 14 ENSG00000119681.10 LTBP2 chr14 74498170 74612378 - protein_coding KNOWN OTTHUMG00000171476.2 114209 9091 119 ENSG00000258425.1 CTD-2207P18.1 chr14 74552181 74560048 + lincRNA NOVEL OTTHUMG00000171477.1 7868 518 2 ENSG00000258976.1 CTD-2207P18.2 chr14 74614693 74616647 - lincRNA NOVEL OTTHUMG00000171478.1 1955 717 4 ENSG00000119682.15 AREL1 chr14 74653437 74713115 - protein_coding KNOWN OTTHUMG00000154499.2 59679 7308 145 ENSG00000258439.1 RP11-173A8.2 chr14 74658049 74658590 + processed_pseudogene KNOWN OTTHUMG00000171479.1 542 542 1 ENSG00000222604.2 SNORA7 chr14 74711936 74712045 + snoRNA NOVEL NA 110 110 1 ENSG00000235060.1 VDAC1P4 chr1 180434800 180435936 + processed_pseudogene KNOWN OTTHUMG00000035114.1 1137 835 2 ENSG00000119616.10 FCF1 chr14 74713144 74738620 + protein_coding KNOWN OTTHUMG00000171480.2 25477 4747 52 ENSG00000119596.16 YLPM1 chr14 74763366 74859435 + protein_coding KNOWN OTTHUMG00000172503.4 96070 14876 83 ENSG00000119608.11 PROX2 chr14 74852871 74871940 - protein_coding KNOWN OTTHUMG00000171481.5 19070 4566 11 ENSG00000258587.1 RP11-316E14.2 chr14 74873684 74874254 + processed_pseudogene KNOWN OTTHUMG00000171482.1 571 571 1 ENSG00000119689.13 DLST chr14 74881891 74903745 + protein_coding KNOWN OTTHUMG00000171483.1 21855 4550 127 ENSG00000198208.10 RPS6KL1 chr14 74903954 74923396 - protein_coding KNOWN OTTHUMG00000171484.3 19443 7617 98 ENSG00000119630.12 PGF chr14 74941834 74955784 - protein_coding KNOWN OTTHUMG00000171496.2 13951 5962 41 ENSG00000119718.9 EIF2B2 chr14 75002911 75012366 + protein_coding KNOWN OTTHUMG00000171764.3 9456 5446 34 ENSG00000258646.1 RP11-950C14.3 chr14 75004719 75008481 - antisense NOVEL OTTHUMG00000171765.1 3763 489 2 ENSG00000279594.1 RP11-950C14.10 chr14 75011269 75012851 - TEC KNOWN OTTHUMG00000172971.1 1583 1583 1 ENSG00000270914.1 RP5-1077B9.5 chr1 12017216 12017308 - processed_pseudogene KNOWN OTTHUMG00000184269.1 93 93 1 ENSG00000265435.1 MIR3121 chr1 180438314 180438390 - miRNA KNOWN NA 77 77 1 ENSG00000119684.14 MLH3 chr14 75013764 75051532 - protein_coding KNOWN OTTHUMG00000171766.3 37769 8363 92 ENSG00000206924.1 RNU6-689P chr14 75020761 75020867 + snRNA KNOWN NA 107 107 1 ENSG00000119640.7 ACYP1 chr14 75053221 75069483 - protein_coding KNOWN OTTHUMG00000171767.1 16263 1841 19 ENSG00000119703.13 ZC2HC1C chr14 75064170 75079987 + protein_coding KNOWN OTTHUMG00000167439.5 15818 4812 22 ENSG00000119638.11 NEK9 chr14 75079353 75127344 - protein_coding KNOWN OTTHUMG00000171768.2 47992 10787 88 ENSG00000258978.1 HIF1AP1 chr14 75116426 75116600 - processed_pseudogene KNOWN OTTHUMG00000171769.1 175 175 1 ENSG00000259138.1 RP11-950C14.7 chr14 75127153 75136930 + antisense NOVEL OTTHUMG00000171770.1 9778 367 2 ENSG00000170348.7 TMED10 chr14 75131470 75176631 - protein_coding KNOWN OTTHUMG00000171771.2 45162 4974 25 ENSG00000273565.1 CTD-3075F15.1 chr14 75176929 75177418 + lincRNA NOVEL OTTHUMG00000186997.1 490 490 1 ENSG00000252013.1 RNU4ATAC14P chr14 75202081 75202169 - snRNA KNOWN NA 89 89 1 ENSG00000206905.1 Y_RNA chr1 180519016 180519119 - misc_RNA NOVEL NA 104 104 1 ENSG00000258740.1 RP11-293M10.1 chr14 75238616 75269283 - lincRNA NOVEL OTTHUMG00000171772.1 30668 678 2 ENSG00000258820.4 RP11-293M10.2 chr14 75259411 75271950 + antisense NOVEL OTTHUMG00000171773.1 12540 874 8 ENSG00000170345.8 FOS chr14 75278774 75282230 + protein_coding KNOWN OTTHUMG00000171774.2 3457 3238 26 ENSG00000119660.4 DPPA5P4 chr14 75292131 75292495 - processed_pseudogene KNOWN OTTHUMG00000171866.2 365 365 1 ENSG00000259687.1 LINC01220 chr14 75294404 75296638 + lincRNA NOVEL OTTHUMG00000171867.1 2235 718 5 ENSG00000259319.1 RP11-293M10.6 chr14 75423683 75427741 - antisense NOVEL OTTHUMG00000171868.1 4059 4059 3 ENSG00000140044.11 JDP2 chr14 75427716 75474111 + protein_coding KNOWN OTTHUMG00000171869.1 46396 6235 26 ENSG00000156127.6 BATF chr14 75522425 75547015 + protein_coding KNOWN OTTHUMG00000171486.1 24591 980 9 ENSG00000224721.1 AC007182.6 chr14 75574888 75579588 - antisense NOVEL OTTHUMG00000148657.1 4701 2159 3 ENSG00000119686.8 FLVCR2 chr14 75578617 75663214 + protein_coding KNOWN OTTHUMG00000171487.3 84598 4913 70 ENSG00000266683.1 AL358354.1 chr1 180545832 180545931 + miRNA NOVEL NA 100 100 1 ENSG00000242951.1 RP11-507E23.1 chr14 75595805 75596206 - processed_pseudogene KNOWN OTTHUMG00000157994.1 402 402 1 ENSG00000201096.1 RNA5SP387 chr14 75604173 75604278 + rRNA KNOWN NA 106 106 1 ENSG00000119685.18 TTLL5 chr14 75633625 75955078 + protein_coding KNOWN OTTHUMG00000171611.5 321454 12266 193 ENSG00000133935.6 C14orf1 chr14 75649791 75661189 - protein_coding KNOWN OTTHUMG00000171488.1 11399 2633 5 ENSG00000259103.1 RP11-270M14.4 chr14 75814502 75847698 - antisense NOVEL OTTHUMG00000171612.1 33197 609 6 ENSG00000242488.2 RP11-270M14.1 chr14 75838157 75839114 - transcribed_processed_pseudogene KNOWN OTTHUMG00000158055.2 958 958 1 ENSG00000119650.11 IFT43 chr14 75902136 76084585 + protein_coding NOVEL OTTHUMG00000171613.1 182450 4172 68 ENSG00000119699.6 TGFB3 chr14 75958099 75982991 - protein_coding KNOWN OTTHUMG00000171489.1 24893 4914 27 ENSG00000258876.1 RP11-270M14.5 chr14 75970924 75971587 + lincRNA NOVEL OTTHUMG00000171614.1 664 580 2 ENSG00000258578.2 RP11-98L12.2 chr14 76013679 76014143 + processed_pseudogene KNOWN OTTHUMG00000171615.2 465 465 1 ENSG00000236719.2 OVAAL chr1 180558976 180566518 + lincRNA NOVEL OTTHUMG00000035112.1 7543 1489 3 ENSG00000089916.16 GPATCH2L chr14 76151916 76254342 + protein_coding KNOWN OTTHUMG00000171490.3 102427 21987 82 ENSG00000258454.1 RP11-361H10.3 chr14 76235817 76263474 + sense_overlapping NOVEL OTTHUMG00000171492.1 27658 520 3 ENSG00000280078.1 RP11-361H10.5 chr14 76279173 76283103 + TEC KNOWN OTTHUMG00000172976.1 3931 3931 1 ENSG00000258402.1 RP11-516J2.1 chr14 76280943 76310066 - lincRNA NOVEL OTTHUMG00000171617.1 29124 520 3 ENSG00000119715.13 ESRRB chr14 76310614 76501841 + protein_coding KNOWN OTTHUMG00000160457.3 191228 5071 55 ENSG00000212061.2 AC016543.1 chr14 76348055 76348138 - miRNA NOVEL NA 84 84 1 ENSG00000259124.1 RP11-187O7.3 chr14 76495363 76726712 - lincRNA NOVEL OTTHUMG00000171618.1 231350 632 4 ENSG00000271423.1 CYCSP1 chr14 76633714 76634028 + processed_pseudogene KNOWN OTTHUMG00000184602.1 315 315 1 ENSG00000242952.1 RP11-187O7.1 chr14 76634775 76635661 - transcribed_processed_pseudogene KNOWN OTTHUMG00000158059.1 887 887 1 ENSG00000258566.2 RP11-99E15.3 chr14 76690139 76690742 - processed_pseudogene KNOWN OTTHUMG00000183857.1 604 604 1 ENSG00000143324.12 XPR1 chr1 180632004 180890251 + protein_coding KNOWN OTTHUMG00000035116.2 258248 8903 37 ENSG00000258569.1 RP11-99E15.2 chr14 76710658 76761388 - lincRNA NOVEL OTTHUMG00000171620.1 50731 540 3 ENSG00000071246.9 VASH1 chr14 76762189 76783015 + protein_coding KNOWN OTTHUMG00000171493.3 20827 6502 22 ENSG00000259081.1 RP11-488C13.6 chr14 76774284 76781518 - antisense NOVEL OTTHUMG00000171621.1 7235 954 4 ENSG00000258610.1 RP11-488C13.7 chr14 76778952 76782249 + lincRNA NOVEL OTTHUMG00000171622.1 3298 721 2 ENSG00000258301.3 RP11-488C13.5 chr14 76781733 76786724 - lincRNA NOVEL OTTHUMG00000171623.2 4992 1843 5 ENSG00000013523.8 ANGEL1 chr14 76786178 76826246 - protein_coding KNOWN OTTHUMG00000171494.5 40069 6414 29 ENSG00000100565.14 LRRC74A chr14 76826372 76870302 + protein_coding KNOWN OTTHUMG00000150153.2 43931 2305 54 ENSG00000241081.1 RP11-488C13.1 chr14 76886377 76886750 - processed_pseudogene KNOWN OTTHUMG00000158060.1 374 374 1 ENSG00000223174.1 RN7SKP17 chr14 76890263 76890613 + misc_RNA KNOWN NA 351 351 1 ENSG00000259058.1 RP11-488C13.4 chr14 76921840 76924649 - lincRNA NOVEL OTTHUMG00000171624.1 2810 756 4 ENSG00000266825.1 AL590085.1 chr1 180827895 180827992 - miRNA NOVEL NA 98 98 1 ENSG00000258602.1 RP11-7F17.7 chr14 76959638 76965802 + lincRNA NOVEL OTTHUMG00000171577.1 6165 581 3 ENSG00000266553.2 RN7SL356P chr14 76967518 76967765 - misc_RNA KNOWN NA 248 248 1 ENSG00000243225.2 RP11-7F17.1 chr14 76968683 76969145 + processed_pseudogene KNOWN OTTHUMG00000158062.2 463 463 1 ENSG00000119669.4 IRF2BPL chr14 77024543 77028699 - protein_coding KNOWN OTTHUMG00000171578.1 4157 4157 1 ENSG00000273729.1 RP11-7F17.8 chr14 77028086 77031572 + antisense NOVEL OTTHUMG00000187016.2 3487 3487 1 ENSG00000246548.3 RP11-7F17.5 chr14 77041064 77069503 + lincRNA NOVEL OTTHUMG00000171579.2 28440 2924 4 ENSG00000258473.1 RP11-7F17.4 chr14 77048172 77086446 - lincRNA NOVEL OTTHUMG00000171580.1 38275 469 3 ENSG00000258819.1 RP11-7F17.3 chr14 77069180 77076344 - lincRNA NOVEL OTTHUMG00000171581.1 7165 2793 7 ENSG00000198894.6 CIPC chr14 77098097 77117287 + protein_coding KNOWN OTTHUMG00000171573.1 19191 5300 31 ENSG00000259164.1 RP11-463C8.4 chr14 77098311 77225462 + protein_coding NOVEL OTTHUMG00000171574.1 127152 603 6 ENSG00000225857.4 RP11-46A10.2 chr1 180906651 180909166 + lincRNA NOVEL OTTHUMG00000035182.1 2516 748 8 ENSG00000165548.9 TMEM63C chr14 77116568 77259495 + protein_coding KNOWN OTTHUMG00000171557.3 142928 6363 56 ENSG00000177108.5 ZDHHC22 chr14 77131270 77142734 - protein_coding KNOWN OTTHUMG00000171575.1 11465 3862 8 ENSG00000269883.1 RP11-463C8.7 chr14 77140683 77142996 + antisense NOVEL OTTHUMG00000187021.1 2314 2314 1 ENSG00000258552.1 RP11-463C8.5 chr14 77173075 77173652 - processed_pseudogene KNOWN OTTHUMG00000171576.1 578 578 1 ENSG00000201384.1 SNORA32 chr14 77201026 77201140 - snoRNA NOVEL NA 115 115 1 ENSG00000276659.1 AC007375.1 chr14 77244287 77244348 + miRNA NOVEL NA 62 62 1 ENSG00000165553.4 NGB chr14 77265483 77271312 - protein_coding KNOWN OTTHUMG00000171558.1 5830 1884 4 ENSG00000221754.1 MIR1260A chr14 77266218 77266290 + miRNA KNOWN NA 73 73 1 ENSG00000009830.10 POMT2 chr14 77274956 77320884 - protein_coding KNOWN OTTHUMG00000171556.2 45929 10012 143 ENSG00000100577.17 GSTZ1 chr14 77320884 77331597 + protein_coding KNOWN OTTHUMG00000171551.1 10714 8477 120 ENSG00000135835.9 KIAA1614 chr1 180913154 180951614 + protein_coding KNOWN OTTHUMG00000035183.1 38461 10195 25 ENSG00000100580.7 TMED8 chr14 77335021 77377109 - protein_coding KNOWN OTTHUMG00000171552.1 42089 7784 6 ENSG00000258510.2 RP11-493G17.4 chr14 77359423 77359916 + processed_pseudogene KNOWN OTTHUMG00000171553.2 494 494 1 ENSG00000100583.4 SAMD15 chr14 77376689 77391497 + protein_coding KNOWN OTTHUMG00000167428.2 14809 2616 6 ENSG00000165555.8 NOXRED1 chr14 77394021 77423517 - protein_coding KNOWN OTTHUMG00000171554.1 29497 2492 16 ENSG00000280308.1 FKSG61 chr14 77416398 77416772 + protein_coding KNOWN NA 375 375 1 ENSG00000151445.14 VIPAS39 chr14 77426675 77457952 - protein_coding KNOWN OTTHUMG00000171538.2 31278 3695 147 ENSG00000277645.1 AF111168.1 chr14 77447966 77448072 - miRNA NOVEL NA 107 107 1 ENSG00000100591.6 AHSA1 chr14 77457870 77469474 + protein_coding KNOWN OTTHUMG00000171539.1 11605 2948 66 ENSG00000280888.1 AF111168.2 chr14 77458206 77458277 + miRNA NOVEL NA 72 72 1 ENSG00000212371.1 SNORA46 chr14 77466284 77466436 + snoRNA NOVEL NA 153 153 1 ENSG00000243155.1 RP11-46A10.5 chr1 180944042 180976482 - antisense NOVEL OTTHUMG00000035174.1 32441 2424 2 ENSG00000100593.16 ISM2 chr14 77474394 77498850 - protein_coding KNOWN OTTHUMG00000158563.4 24457 4131 38 ENSG00000100596.5 SPTLC2 chr14 77505997 77616773 - protein_coding KNOWN OTTHUMG00000171540.1 110777 9143 32 ENSG00000281458.1 AF111168.3 chr14 77547564 77547641 - miRNA NOVEL NA 78 78 1 ENSG00000240233.3 RN7SL587P chr14 77547566 77547846 - misc_RNA KNOWN NA 281 281 1 ENSG00000258668.1 COX6CP11 chr14 77652827 77653055 - processed_pseudogene KNOWN OTTHUMG00000171541.1 229 229 1 ENSG00000100601.8 ALKBH1 chr14 77672404 77708020 - protein_coding KNOWN OTTHUMG00000171542.1 35617 2844 19 ENSG00000239272.1 RPL21P10 chr14 77683202 77683989 - processed_pseudogene KNOWN OTTHUMG00000158069.1 788 490 2 ENSG00000258917.1 ZMYND19P1 chr14 77696591 77697377 + processed_pseudogene KNOWN OTTHUMG00000171543.1 787 787 1 ENSG00000119705.8 SLIRP chr14 77708071 77761104 + protein_coding KNOWN OTTHUMG00000171526.1 53034 2631 46 ENSG00000100603.12 SNW1 chr14 77717599 77761207 - protein_coding KNOWN OTTHUMG00000171527.1 43609 2432 68 ENSG00000232586.1 KIAA1614-AS1 chr1 180949699 180954887 - antisense NOVEL OTTHUMG00000035173.1 5189 1440 2 ENSG00000197734.7 C14orf178 chr14 77760830 77769742 + protein_coding KNOWN OTTHUMG00000171528.1 8913 704 10 ENSG00000063761.14 ADCK1 chr14 77800083 77935012 + protein_coding KNOWN OTTHUMG00000171520.1 134930 5317 55 ENSG00000199440.1 Y_RNA chr14 77821030 77821142 - misc_RNA NOVEL NA 113 113 1 ENSG00000258421.2 FRDAP chr14 78059942 78060278 - processed_pseudogene KNOWN OTTHUMG00000171521.2 337 337 1 ENSG00000199454.1 RNA5SP388 chr14 78177803 78177921 - rRNA KNOWN NA 119 119 1 ENSG00000239438.1 RP11-332E19.1 chr14 78231281 78231619 - processed_pseudogene KNOWN OTTHUMG00000158071.1 339 339 1 ENSG00000021645.16 NRXN3 chr14 78242391 79868290 + protein_coding KNOWN OTTHUMG00000171502.2 1625900 15206 115 ENSG00000258723.1 RP11-332E19.2 chr14 78279572 78283376 - antisense NOVEL OTTHUMG00000171512.1 3805 525 3 ENSG00000239163.1 AC007056.1 chr14 78397878 78397959 - miRNA NOVEL NA 82 82 1 ENSG00000221178.1 AC008045.1 chr14 78617866 78617975 + miRNA NOVEL NA 110 110 1 ENSG00000116691.9 MIIP chr1 12019466 12032045 + protein_coding KNOWN OTTHUMG00000002439.1 12580 2821 38 ENSG00000251520.1 RP11-46A10.6 chr1 180964511 180965909 + unprocessed_pseudogene KNOWN OTTHUMG00000035176.1 1399 537 2 ENSG00000258719.1 RP11-232C2.3 chr14 78695321 78698122 - antisense NOVEL OTTHUMG00000171513.1 2802 700 2 ENSG00000258874.1 RP11-232C2.2 chr14 78703615 78709934 - antisense NOVEL OTTHUMG00000171514.1 6320 354 2 ENSG00000258478.1 RP11-232C2.1 chr14 78744398 78753878 - antisense NOVEL OTTHUMG00000171515.1 9481 1079 2 ENSG00000258829.1 CTD-2243E23.1 chr14 79072132 79074767 - antisense NOVEL OTTHUMG00000171516.1 2636 592 4 ENSG00000258419.1 RP11-588P7.1 chr14 79199982 79201632 + sense_intronic NOVEL OTTHUMG00000171503.1 1651 656 2 ENSG00000258662.1 RP11-588P7.2 chr14 79246668 79249023 - antisense NOVEL OTTHUMG00000171517.1 2356 396 5 ENSG00000259106.1 RP11-242P2.2 chr14 79611418 79633311 - antisense NOVEL OTTHUMG00000171518.1 21894 551 3 ENSG00000258637.1 RP11-242P2.1 chr14 79661666 79791263 - antisense NOVEL OTTHUMG00000171519.1 129598 394 4 ENSG00000258416.1 RP11-526N18.1 chr14 79893080 79974169 - lincRNA NOVEL OTTHUMG00000171504.1 81090 446 3 ENSG00000211448.10 DIO2 chr14 80197527 80387757 - protein_coding KNOWN OTTHUMG00000171443.3 190231 7494 37 ENSG00000270711.1 RP11-46A10.8 chr1 180970837 180971247 + processed_pseudogene KNOWN OTTHUMG00000184453.1 411 411 1 ENSG00000258766.1 DIO2-AS1 chr14 80211419 80455469 + antisense NOVEL OTTHUMG00000171497.1 244051 1597 9 ENSG00000100629.15 CEP128 chr14 80476983 80959517 - protein_coding KNOWN OTTHUMG00000171442.2 482535 9400 135 ENSG00000258452.1 RP11-757H14.2 chr14 80822524 80822796 + processed_pseudogene KNOWN OTTHUMG00000171444.1 273 273 1 ENSG00000165409.14 TSHR chr14 80954989 81146302 + protein_coding KNOWN OTTHUMG00000171429.1 191314 5519 59 ENSG00000258915.1 BHLHB9P1 chr14 80981988 80983638 + processed_pseudogene KNOWN OTTHUMG00000171430.1 1651 1651 1 ENSG00000271705.1 RPL17P3 chr14 81001166 81001786 - unprocessed_pseudogene KNOWN OTTHUMG00000184421.1 621 525 2 ENSG00000271656.1 RP11-114N19.5 chr14 81003325 81003645 - processed_pseudogene KNOWN OTTHUMG00000184540.1 321 321 1 ENSG00000259167.2 NMNAT1P1 chr14 81032529 81033404 + processed_pseudogene KNOWN OTTHUMG00000171431.2 876 876 1 ENSG00000258999.1 RP11-114N19.3 chr14 81107033 81170414 - antisense NOVEL OTTHUMG00000171432.1 63382 601 3 ENSG00000165417.10 GTF2A1 chr14 81175452 81221377 - protein_coding KNOWN OTTHUMG00000171414.1 45926 6819 33 ENSG00000135823.12 STX6 chr1 180972712 181023121 - protein_coding KNOWN OTTHUMG00000035179.1 50410 6477 19 ENSG00000273941.1 AL136040.1 chr14 81195040 81195148 + miRNA NOVEL NA 109 109 1 ENSG00000221303.1 SNORA79 chr14 81202695 81202834 - snoRNA KNOWN NA 140 140 1 ENSG00000273783.1 CTD-2506P8.6 chr14 81221218 81222460 + antisense NOVEL OTTHUMG00000187045.1 1243 1130 2 ENSG00000205579.3 DYNLL1P1 chr14 81246295 81246563 - processed_pseudogene KNOWN OTTHUMG00000171415.2 269 269 1 ENSG00000270343.1 UNGP3 chr14 81259565 81260239 - processed_pseudogene KNOWN OTTHUMG00000184395.1 675 675 1 ENSG00000140022.8 STON2 chr14 81260656 81436465 - protein_coding KNOWN OTTHUMG00000171416.1 175810 6675 37 ENSG00000242163.1 RP11-299L17.1 chr14 81332961 81333361 - processed_pseudogene KNOWN OTTHUMG00000158077.1 401 401 1 ENSG00000258605.1 DYNLL1P2 chr14 81412970 81413239 + processed_pseudogene KNOWN OTTHUMG00000171417.1 270 270 1 ENSG00000258675.1 RP11-299L17.3 chr14 81441987 81450157 - lincRNA NOVEL OTTHUMG00000171418.1 8171 637 3 ENSG00000071537.12 SEL1L chr14 81471549 81533861 - protein_coding KNOWN OTTHUMG00000171419.1 62313 9559 44 ENSG00000153029.13 MR1 chr1 181033425 181061938 + protein_coding KNOWN OTTHUMG00000035175.2 28514 9348 46 ENSG00000258977.1 LINC01467 chr14 81605347 81623061 - lincRNA NOVEL OTTHUMG00000171398.1 17715 1187 3 ENSG00000258841.1 EEF1A1P2 chr14 81661428 81662874 + processed_pseudogene KNOWN OTTHUMG00000171399.1 1447 1447 1 ENSG00000258718.1 RP11-226P1.2 chr14 81727780 81743138 - lincRNA NOVEL OTTHUMG00000171400.1 15359 824 5 ENSG00000259035.1 RP11-666E17.1 chr14 81741002 82030349 + lincRNA NOVEL OTTHUMG00000171401.1 289348 559 4 ENSG00000241891.1 RP11-226P1.1 chr14 81777016 81777613 - processed_pseudogene KNOWN OTTHUMG00000158078.1 598 598 1 ENSG00000258501.1 EIF3LP1 chr14 81916231 81917888 + processed_pseudogene KNOWN OTTHUMG00000171402.1 1658 1658 1 ENSG00000275986.1 AL357095.1 chr14 82427420 82427508 - miRNA NOVEL NA 89 89 1 ENSG00000276782.1 Metazoa_SRP chr14 82429872 82430156 + misc_RNA NOVEL NA 285 285 1 ENSG00000258743.4 RP11-406A9.2 chr14 82642620 82706825 + lincRNA NOVEL OTTHUMG00000171387.1 64206 1754 14 ENSG00000259032.2 ENSAP2 chr14 82692704 82693055 - processed_pseudogene KNOWN OTTHUMG00000171388.2 352 352 1 ENSG00000162783.10 IER5 chr1 181088712 181092899 + protein_coding KNOWN OTTHUMG00000035178.2 4188 4188 1 ENSG00000258683.1 RP11-11K13.1 chr14 82788478 82796221 - lincRNA NOVEL OTTHUMG00000171389.1 7744 539 2 ENSG00000258600.1 RP11-452D21.2 chr14 83017106 83018144 - lincRNA NOVEL OTTHUMG00000171380.1 1039 744 2 ENSG00000258426.1 RP11-452D21.1 chr14 83018201 83039602 - lincRNA NOVEL OTTHUMG00000171381.1 21402 448 2 ENSG00000252369.1 RNU7-51P chr14 83048579 83048640 + snRNA KNOWN NA 62 62 1 ENSG00000238561.1 RNU6ATAC28P chr14 83750384 83750501 + snRNA KNOWN NA 118 118 1 ENSG00000258549.1 RP11-22K10.1 chr14 83805496 83805640 - processed_pseudogene KNOWN OTTHUMG00000171382.1 145 145 1 ENSG00000258532.1 RP11-353P15.1 chr14 83906872 83915050 - lincRNA NOVEL OTTHUMG00000171383.1 8179 476 3 ENSG00000258762.1 CTD-2320B12.3 chr14 84172841 84173606 + processed_pseudogene KNOWN OTTHUMG00000171375.1 766 766 1 ENSG00000258923.2 CTD-2320B12.1 chr14 84173791 84175510 + processed_pseudogene KNOWN OTTHUMG00000171376.2 1720 1720 1 ENSG00000259012.2 CTD-2320B12.2 chr14 84176419 84177088 + processed_pseudogene KNOWN OTTHUMG00000171377.2 670 670 1 ENSG00000237292.1 RP11-540K16.1 chr1 181174484 181182208 + lincRNA NOVEL OTTHUMG00000035180.1 7725 667 6 ENSG00000251895.1 RNU6-976P chr14 84739942 84740052 + snRNA KNOWN NA 111 111 1 ENSG00000258506.2 RP11-688D15.1 chr14 84951274 84951373 + processed_pseudogene KNOWN OTTHUMG00000171378.2 100 100 1 ENSG00000271712.1 RP11-688D15.2 chr14 84998278 84999296 - processed_pseudogene KNOWN OTTHUMG00000184527.1 1019 1019 1 ENSG00000259044.1 RP11-789A21.1 chr14 85202849 85239474 - lincRNA NOVEL OTTHUMG00000171379.1 36626 593 3 ENSG00000258902.1 CTD-2128A3.2 chr14 85362457 85516934 - lincRNA NOVEL OTTHUMG00000171367.1 154478 558 5 ENSG00000258814.1 CTD-2128A3.3 chr14 85387275 85388765 + lincRNA NOVEL OTTHUMG00000171368.1 1491 511 3 ENSG00000259107.1 LINC00911 chr14 85393879 85420074 + lincRNA NOVEL OTTHUMG00000171369.1 26196 558 5 ENSG00000205562.2 RP11-497E19.1 chr14 85524432 85529988 - lincRNA NOVEL OTTHUMG00000171370.2 5557 2448 2 ENSG00000258945.1 RP11-497E19.2 chr14 85528599 85529386 + lincRNA NOVEL OTTHUMG00000171371.1 788 643 2 ENSG00000185070.9 FLRT2 chr14 85530144 85654426 + protein_coding KNOWN OTTHUMG00000171372.2 124283 34899 19 ENSG00000225359.1 RP11-540K16.2 chr1 181190471 181191149 - lincRNA NOVEL OTTHUMG00000035181.1 679 532 2 ENSG00000258733.4 CTD-2341M24.1 chr14 85934710 86129778 + lincRNA NOVEL OTTHUMG00000171373.2 195069 1568 12 ENSG00000258912.1 RP11-1079H9.1 chr14 86014686 86062960 - lincRNA NOVEL OTTHUMG00000171374.1 48275 768 6 ENSG00000258994.1 RP11-26L16.1 chr14 86332376 86401285 + lincRNA NOVEL OTTHUMG00000171356.1 68910 207 3 ENSG00000258804.1 RP11-322L20.1 chr14 86905778 86922755 + lincRNA NOVEL OTTHUMG00000171357.1 16978 1763 5 ENSG00000259061.1 RP11-736P16.1 chr14 86936640 86989125 + lincRNA NOVEL OTTHUMG00000171351.2 52486 412 3 ENSG00000258496.1 RP11-1141N12.1 chr14 87251103 87251679 + lincRNA NOVEL OTTHUMG00000171352.1 577 332 2 ENSG00000258958.1 RP11-594C13.2 chr14 87323753 87332390 + lincRNA NOVEL OTTHUMG00000171353.1 8638 369 3 ENSG00000258859.1 RP11-594C13.1 chr14 87353070 87573022 - lincRNA NOVEL OTTHUMG00000171354.1 219953 544 7 ENSG00000259028.1 RP11-325D8.1 chr14 87568181 87569399 + lincRNA NOVEL OTTHUMG00000171355.1 1219 547 3 ENSG00000258770.1 CTD-2007A10.1 chr14 87634379 87655294 - lincRNA NOVEL OTTHUMG00000171350.1 20916 555 3 ENSG00000179452.2 GM140 chr1 181236388 181238604 + lincRNA NOVEL OTTHUMG00000035177.1 2217 259 3 ENSG00000258807.4 RP11-1152H15.1 chr14 87710419 87872291 - lincRNA NOVEL OTTHUMG00000170725.1 161873 1845 12 ENSG00000259077.1 RP11-804L24.2 chr14 87810982 87838339 + lincRNA NOVEL OTTHUMG00000170726.1 27358 790 3 ENSG00000054983.15 GALC chr14 87837820 87993665 - protein_coding KNOWN OTTHUMG00000028646.3 155846 6825 154 ENSG00000259096.1 FAM35CP chr14 87952527 87955203 + processed_pseudogene KNOWN OTTHUMG00000170727.1 2677 2470 2 ENSG00000252783.1 RNU6-835P chr14 87996345 87996448 - snRNA KNOWN NA 104 104 1 ENSG00000140030.5 GPR65 chr14 88005124 88014811 + protein_coding KNOWN OTTHUMG00000028648.5 9688 4522 2 ENSG00000258407.1 RP11-300J18.2 chr14 88010787 88015611 - antisense NOVEL OTTHUMG00000170738.2 4825 331 3 ENSG00000258826.4 RP11-300J18.1 chr14 88018605 88036319 - lincRNA NOVEL OTTHUMG00000170739.1 17715 558 8 ENSG00000258867.4 LINC01146 chr14 88024550 88097619 + lincRNA NOVEL OTTHUMG00000170740.2 73070 2807 26 ENSG00000258975.1 RP11-753D20.1 chr14 88136733 88159845 - lincRNA NOVEL OTTHUMG00000170741.1 23113 428 3 ENSG00000198216.9 CACNA1E chr1 181413102 181808084 + protein_coding KNOWN OTTHUMG00000037301.5 394983 17771 397 ENSG00000259998.1 RP11-753D20.4 chr14 88158240 88160591 - lincRNA NOVEL OTTHUMG00000172985.2 2352 2352 1 ENSG00000258538.4 RP11-753D20.3 chr14 88175391 88180198 + lincRNA NOVEL OTTHUMG00000170742.1 4808 608 6 ENSG00000100433.14 KCNK10 chr14 88180103 88326907 - protein_coding KNOWN OTTHUMG00000170743.2 146805 8258 24 ENSG00000042317.15 SPATA7 chr14 88384924 88470350 + protein_coding KNOWN OTTHUMG00000170744.2 85427 6872 149 ENSG00000070778.11 PTPN21 chr14 88465778 88554733 - protein_coding KNOWN OTTHUMG00000170766.1 88956 7396 99 ENSG00000258983.2 RP11-507K2.2 chr14 88499334 88515502 + antisense NOVEL OTTHUMG00000170801.2 16169 905 5 ENSG00000222990.1 RNU4-22P chr14 88513498 88513663 + snRNA KNOWN NA 166 166 1 ENSG00000258789.1 RP11-507K2.3 chr14 88551597 88552493 + antisense NOVEL OTTHUMG00000170802.1 897 718 2 ENSG00000100722.17 ZC3H14 chr14 88562909 88627596 + protein_coding KNOWN OTTHUMG00000170803.4 64688 20977 209 ENSG00000278576.1 RP11-507K2.6 chr14 88589231 88592408 + sense_intronic NOVEL OTTHUMG00000188630.1 3178 3178 1 ENSG00000273573.1 Metazoa_SRP chr1 181668749 181669028 + misc_RNA NOVEL NA 280 280 1 ENSG00000165521.14 EML5 chr14 88612431 88792752 - protein_coding KNOWN OTTHUMG00000170811.2 180322 11000 155 ENSG00000274492.1 RP11-976B16.1 chr14 88819608 88822151 - lincRNA NOVEL OTTHUMG00000187066.1 2544 2544 1 ENSG00000200653.1 RNU4-92P chr14 88820297 88820432 + snRNA KNOWN NA 136 136 1 ENSG00000165533.17 TTC8 chr14 88824153 88881078 + protein_coding KNOWN OTTHUMG00000170884.2 56926 6257 187 ENSG00000207342.1 Y_RNA chr14 88840165 88840263 + misc_RNA NOVEL NA 99 99 1 ENSG00000258990.2 MPPE1P1 chr14 89110148 89111223 - processed_pseudogene KNOWN OTTHUMG00000170891.3 1076 1076 1 ENSG00000053254.14 FOXN3 chr14 89124871 89619149 - protein_coding KNOWN OTTHUMG00000170898.2 494279 11033 79 ENSG00000277801.1 RP11-681H18.2 chr14 89156743 89157574 + lincRNA NOVEL OTTHUMG00000188137.1 832 832 1 ENSG00000259151.2 CAP2P1 chr14 89290205 89291594 - transcribed_processed_pseudogene KNOWN OTTHUMG00000170969.2 1390 1390 1 ENSG00000258752.1 RP11-356K23.1 chr14 89350285 89364699 + antisense NOVEL OTTHUMG00000170970.1 14415 907 4 ENSG00000202461.1 Y_RNA chr1 12024012 12024124 - misc_RNA NOVEL NA 113 113 1 ENSG00000252977.1 RNA5SP70 chr1 181771566 181771644 + rRNA KNOWN NA 79 79 1 ENSG00000258699.1 RP11-356K23.2 chr14 89355060 89356571 + antisense NOVEL OTTHUMG00000170971.1 1512 458 2 ENSG00000258380.1 RP11-33N16.2 chr14 89399995 89409469 + antisense NOVEL OTTHUMG00000170972.1 9475 341 2 ENSG00000259053.1 RP11-33N16.3 chr14 89412312 89954659 - processed_transcript NOVEL OTTHUMG00000170977.1 542348 452 4 ENSG00000258920.1 FOXN3-AS1 chr14 89417354 89419793 + antisense KNOWN OTTHUMG00000170973.1 2440 1077 2 ENSG00000259073.1 FOXN3-AS2 chr14 89576216 89577477 + antisense NOVEL OTTHUMG00000170974.1 1262 1262 1 ENSG00000281485.1 Y_RNA chr14 89585662 89585761 + misc_RNA NOVEL NA 100 100 1 ENSG00000201027.1 RN7SKP107 chr14 89621918 89622207 + misc_RNA KNOWN NA 290 290 1 ENSG00000258792.3 RP11-944C7.1 chr14 89628921 89642671 - lincRNA NOVEL OTTHUMG00000170975.1 13751 1122 7 ENSG00000252655.1 Y_RNA chr14 89650793 89650903 - misc_RNA NOVEL NA 111 111 1 ENSG00000200312.1 RN7SKP255 chr14 89712511 89712823 + misc_RNA KNOWN NA 313 313 1 ENSG00000272880.1 RP11-33M22.2 chr1 181812705 181813261 + lincRNA NOVEL OTTHUMG00000186477.1 557 557 1 ENSG00000259050.2 CHORDC2P chr14 89736965 89738391 - processed_pseudogene KNOWN OTTHUMG00000170976.2 1427 1090 2 ENSG00000140025.14 EFCAB11 chr14 89794669 89954777 - protein_coding KNOWN OTTHUMG00000148671.3 160109 8302 68 ENSG00000230997.5 RAB42P1 chr14 89892128 89892443 + processed_pseudogene KNOWN OTTHUMG00000171015.2 316 316 1 ENSG00000042088.12 TDP1 chr14 89954939 90044768 + protein_coding KNOWN OTTHUMG00000171016.2 89830 6227 160 ENSG00000152315.4 KCNK13 chr14 90061765 90185857 + protein_coding KNOWN OTTHUMG00000171017.1 124093 2522 2 ENSG00000258544.1 RP11-750I4.2 chr14 90107675 90107995 + processed_pseudogene KNOWN OTTHUMG00000171018.1 321 321 1 ENSG00000201351.1 Y_RNA chr14 90177222 90177330 + misc_RNA NOVEL NA 109 109 1 ENSG00000100764.12 PSMC1 chr14 90256495 90275429 + protein_coding KNOWN OTTHUMG00000171019.2 18935 6161 43 ENSG00000119720.16 NRDE2 chr14 90267856 90332137 - protein_coding KNOWN OTTHUMG00000171020.4 64282 17565 56 ENSG00000242571.1 RPL21P11 chr14 90366697 90367179 - processed_pseudogene KNOWN OTTHUMG00000158081.1 483 483 1 ENSG00000222397.1 RN7SKP229 chr1 181839473 181839774 - misc_RNA KNOWN NA 302 302 1 ENSG00000238758.1 AL512791.1 chr14 90381198 90381252 + miRNA NOVEL NA 55 55 1 ENSG00000275198.1 RP11-471B22.3 chr14 90383365 90387973 + lincRNA NOVEL OTTHUMG00000187067.1 4609 4609 1 ENSG00000198668.9 CALM1 chr14 90396502 90408261 + protein_coding KNOWN OTTHUMG00000171044.1 11760 7705 68 ENSG00000258424.1 RP11-471B22.2 chr14 90402523 90405235 - antisense NOVEL OTTHUMG00000171045.1 2713 300 2 ENSG00000258678.1 RP11-1078H9.1 chr14 90452063 90455117 - lincRNA NOVEL OTTHUMG00000171046.1 3055 426 3 ENSG00000233208.4 LINC00642 chr14 90455230 90458905 + lincRNA NOVEL OTTHUMG00000149923.1 3676 2068 10 ENSG00000259789.1 RP11-1078H9.6 chr14 90489012 90491637 - lincRNA NOVEL OTTHUMG00000172987.1 2626 2626 1 ENSG00000165914.13 TTC7B chr14 90524564 90816479 - protein_coding KNOWN OTTHUMG00000171047.3 291916 21268 99 ENSG00000252748.1 AL096869.1 chr14 90565141 90565225 + miRNA NOVEL NA 85 85 1 ENSG00000258935.1 RP11-1078H9.2 chr14 90567495 90569976 + lincRNA NOVEL OTTHUMG00000171048.1 2482 559 2 ENSG00000179930.5 ZNF648 chr1 182054570 182061712 - protein_coding KNOWN OTTHUMG00000037302.1 7143 3649 2 ENSG00000259163.1 RP11-1078H9.5 chr14 90642638 90648894 + antisense NOVEL OTTHUMG00000171050.1 6257 1376 7 ENSG00000258437.1 RP11-661G16.1 chr14 90675118 90676294 + antisense NOVEL OTTHUMG00000171051.1 1177 539 2 ENSG00000258716.1 RP11-661G16.2 chr14 90697333 90699374 + antisense NOVEL OTTHUMG00000171052.1 2042 1954 2 ENSG00000213315.5 CTD-3035D6.1 chr14 90766531 90766989 + processed_pseudogene KNOWN OTTHUMG00000158116.1 459 459 1 ENSG00000258884.1 CTD-3035D6.2 chr14 90822365 90828128 - lincRNA NOVEL OTTHUMG00000171053.1 5764 384 3 ENSG00000100784.8 RPS6KA5 chr14 90847862 91060636 - protein_coding KNOWN OTTHUMG00000171055.3 212775 27726 98 ENSG00000133943.19 C14orf159 chr14 91060333 91225632 + protein_coding KNOWN OTTHUMG00000164980.4 165300 7212 305 ENSG00000252644.1 RNU7-30P chr14 91091077 91091138 + snRNA KNOWN NA 62 62 1 ENSG00000221102.1 SNORA11B chr14 91126425 91126553 + snoRNA KNOWN NA 129 129 1 ENSG00000119714.9 GPR68 chr14 91232532 91253925 - protein_coding KNOWN OTTHUMG00000167590.2 21394 3278 9 ENSG00000224810.1 RP11-538D16.2 chr1 182062677 182069253 - lincRNA NOVEL OTTHUMG00000037303.1 6577 2463 3 ENSG00000258875.4 CTD-2547L24.3 chr14 91242759 91252211 + processed_transcript NOVEL OTTHUMG00000171098.2 9453 1916 7 ENSG00000260810.1 CTD-2547L24.4 chr14 91258299 91259003 + lincRNA NOVEL OTTHUMG00000172988.1 705 705 1 ENSG00000015133.17 CCDC88C chr14 91271323 91417844 - protein_coding KNOWN OTTHUMG00000171099.1 146522 12426 83 ENSG00000265856.1 AL133153.1 chr14 91333713 91333823 + miRNA NOVEL NA 111 111 1 ENSG00000258798.1 RP11-895M11.3 chr14 91418266 91421176 + lincRNA NOVEL OTTHUMG00000171100.1 2911 303 2 ENSG00000258446.1 RP11-895M11.2 chr14 91419449 91419751 + processed_pseudogene KNOWN OTTHUMG00000171101.1 303 303 1 ENSG00000100796.16 SMEK1 chr14 91457611 91510554 - protein_coding KNOWN OTTHUMG00000171102.1 52944 5912 102 ENSG00000278342.1 RP11-248B24.5 chr14 91554410 91554503 + unprocessed_pseudogene KNOWN OTTHUMG00000187842.1 94 94 1 ENSG00000279286.2 RP11-248B24.1 chr14 91572444 91575271 - TEC KNOWN OTTHUMG00000168701.1 2828 2828 2 ENSG00000133962.6 CATSPERB chr14 91580696 91780707 - protein_coding KNOWN OTTHUMG00000171118.1 200012 5635 65 ENSG00000225982.1 RP11-538D16.3 chr1 182086551 182090112 + lincRNA NOVEL OTTHUMG00000037300.1 3562 1145 3 ENSG00000268295.1 POLR3GP1 chr14 91603173 91603433 - transcribed_processed_pseudogene KNOWN OTTHUMG00000183872.1 261 261 1 ENSG00000258774.1 NANOGP7 chr14 91604402 91605319 - transcribed_processed_pseudogene KNOWN OTTHUMG00000171119.1 918 918 1 ENSG00000258962.2 RP11-747H7.1 chr14 91709111 91710617 + processed_pseudogene KNOWN OTTHUMG00000171120.2 1507 1185 2 ENSG00000275154.1 U3 chr14 91714915 91715130 - snoRNA NOVEL NA 216 216 1 ENSG00000260711.2 RP11-747H7.3 chr14 91752856 91759798 - sense_intronic NOVEL OTTHUMG00000172989.2 6943 6943 1 ENSG00000165929.11 TC2N chr14 91779751 91867536 - protein_coding KNOWN OTTHUMG00000171121.1 87786 6147 57 ENSG00000140092.13 FBLN5 chr14 91869412 91947987 - protein_coding KNOWN OTTHUMG00000171122.2 78576 4973 60 ENSG00000100815.11 TRIP11 chr14 91965991 92040896 - protein_coding KNOWN OTTHUMG00000171128.2 74906 10372 52 ENSG00000259020.3 RP11-529H20.3 chr14 92026566 92026887 + processed_pseudogene KNOWN OTTHUMG00000171129.1 322 322 1 ENSG00000066427.20 ATXN3 chr14 92038652 92106621 - protein_coding KNOWN OTTHUMG00000162212.9 67970 28202 426 ENSG00000232309.1 GS1-122H1.1 chr1 182127297 182128665 - lincRNA NOVEL OTTHUMG00000037400.1 1369 628 3 ENSG00000279963.1 AL049872.1 chr14 92070230 92071042 + protein_coding KNOWN NA 813 63 2 ENSG00000183648.8 NDUFB1 chr14 92116122 92121917 - protein_coding KNOWN OTTHUMG00000171180.2 5796 2263 20 ENSG00000165934.11 CPSF2 chr14 92121937 92172145 + protein_coding KNOWN OTTHUMG00000171181.2 50209 13595 31 ENSG00000258481.1 RP11-472N19.3 chr14 92253493 92263656 - lincRNA NOVEL OTTHUMG00000171197.1 10164 580 2 ENSG00000201097.1 RNU6-366P chr14 92265702 92265807 + snRNA KNOWN NA 106 106 1 ENSG00000140090.16 SLC24A4 chr14 92322581 92501483 + protein_coding KNOWN OTTHUMG00000167589.3 178903 14412 97 ENSG00000100599.14 RIN3 chr14 92513774 92688994 + protein_coding KNOWN OTTHUMG00000171198.1 175221 8683 62 ENSG00000100600.13 LGMN chr14 92703807 92748702 - protein_coding KNOWN OTTHUMG00000171199.2 44896 3899 128 ENSG00000066455.11 GOLGA5 chr14 92794231 92839963 + protein_coding KNOWN OTTHUMG00000171217.1 45733 3295 18 ENSG00000258742.4 RP11-862G15.1 chr14 92886352 92893506 + lincRNA NOVEL OTTHUMG00000171223.1 7155 2072 11 ENSG00000228918.3 LINC01344 chr1 182129310 182314061 - lincRNA NOVEL OTTHUMG00000037403.1 184752 3161 22 ENSG00000258499.1 RP11-862G15.2 chr14 92905697 92907482 - lincRNA NOVEL OTTHUMG00000171224.2 1786 1384 2 ENSG00000100604.11 CHGA chr14 92923080 92935293 + protein_coding KNOWN OTTHUMG00000171225.2 12214 3102 30 ENSG00000100605.15 ITPK1 chr14 92936914 93116320 - protein_coding KNOWN OTTHUMG00000171226.3 179407 6783 93 ENSG00000258730.1 ITPK1-AS1 chr14 93067452 93072152 + antisense KNOWN OTTHUMG00000171263.1 4701 4701 1 ENSG00000258595.2 RP11-371E8.2 chr14 93138066 93138465 + processed_pseudogene KNOWN OTTHUMG00000171264.2 400 400 1 ENSG00000165943.4 MOAP1 chr14 93182196 93184928 - protein_coding KNOWN OTTHUMG00000169184.2 2733 2537 5 ENSG00000153485.5 TMEM251 chr14 93184951 93187089 + protein_coding KNOWN OTTHUMG00000171265.1 2139 1365 4 ENSG00000259066.4 RP11-371E8.4 chr14 93184973 93218586 + protein_coding NOVEL OTTHUMG00000171266.1 33614 920 16 ENSG00000170270.4 C14orf142 chr14 93202894 93207094 - protein_coding KNOWN OTTHUMG00000171267.1 4201 1154 4 ENSG00000012963.12 UBR7 chr14 93207056 93229215 + protein_coding KNOWN OTTHUMG00000171268.1 22160 3694 59 ENSG00000232096.1 YPEL5P1 chr1 182182730 182183096 - processed_pseudogene KNOWN OTTHUMG00000037406.1 367 367 1 ENSG00000240096.1 RP11-85G20.1 chr14 93223598 93224139 - processed_pseudogene KNOWN OTTHUMG00000158117.1 542 542 1 ENSG00000011114.13 BTBD7 chr14 93237550 93333092 - protein_coding KNOWN OTTHUMG00000171269.1 95543 11333 49 ENSG00000241499.1 RP11-85G20.2 chr14 93244010 93244323 + processed_pseudogene KNOWN OTTHUMG00000158119.1 314 314 1 ENSG00000133958.12 UNC79 chr14 93333219 93707876 + protein_coding KNOWN OTTHUMG00000029783.4 374658 12513 251 ENSG00000278396.1 RP11-120E11.2 chr14 93334528 93335057 + sense_intronic NOVEL OTTHUMG00000188596.1 530 530 1 ENSG00000187581.2 COX8C chr14 93347191 93348356 + protein_coding KNOWN OTTHUMG00000171279.2 1166 533 2 ENSG00000202306.1 Y_RNA chr14 93397139 93397234 - misc_RNA NOVEL NA 96 96 1 ENSG00000252720.1 RNU6-1258P chr14 93437400 93437510 - snRNA KNOWN NA 111 111 1 ENSG00000277826.1 uc_338 chr14 93637179 93637338 + misc_RNA NOVEL NA 160 160 1 ENSG00000175785.11 PRIMA1 chr14 93718298 93788481 - protein_coding KNOWN OTTHUMG00000141313.2 70184 3892 20 ENSG00000206764.1 RNU6-152P chr1 182327068 182327174 + snRNA KNOWN NA 107 107 1 ENSG00000279593.1 RP11-131H24.5 chr14 93895762 93897759 + TEC KNOWN OTTHUMG00000173001.1 1998 1998 1 ENSG00000258584.1 FAM181A-AS1 chr14 93904730 93927066 - antisense KNOWN OTTHUMG00000171296.1 22337 2781 19 ENSG00000140067.6 FAM181A chr14 93918894 93929608 + protein_coding KNOWN OTTHUMG00000171297.2 10715 2202 11 ENSG00000100628.10 ASB2 chr14 93934153 93976791 - protein_coding KNOWN OTTHUMG00000171298.1 42639 5040 46 ENSG00000258987.1 RP11-131H24.4 chr14 93939555 93944129 + antisense NOVEL OTTHUMG00000171299.1 4575 553 5 ENSG00000265768.1 MIR4506 chr14 93948226 93948302 - miRNA KNOWN NA 77 77 1 ENSG00000175699.11 LINC00521 chr14 93997270 94008863 + lincRNA KNOWN OTTHUMG00000156974.1 11594 2468 24 ENSG00000089723.8 OTUB2 chr14 94026329 94048930 + protein_coding KNOWN OTTHUMG00000171300.1 22602 4252 9 ENSG00000089737.14 DDX24 chr14 94048291 94081245 - protein_coding KNOWN OTTHUMG00000171301.2 32955 8636 60 ENSG00000165948.9 IFI27L1 chr14 94081282 94103846 + protein_coding KNOWN OTTHUMG00000171302.1 22565 2380 59 ENSG00000276869.1 MIR6729 chr1 12029158 12029222 + miRNA KNOWN NA 65 65 1 ENSG00000228664.1 RP11-416K24.1 chr1 182328497 182329007 + processed_pseudogene KNOWN OTTHUMG00000037401.1 511 511 1 ENSG00000165949.11 IFI27 chr14 94104836 94116698 + protein_coding KNOWN OTTHUMG00000171303.4 11863 4147 61 ENSG00000119632.3 IFI27L2 chr14 94127779 94130253 - protein_coding KNOWN OTTHUMG00000171313.1 2475 1662 17 ENSG00000119698.10 PPP4R4 chr14 94146128 94279735 + protein_coding KNOWN OTTHUMG00000171344.1 133608 4974 51 ENSG00000140093.8 SERPINA10 chr14 94280455 94293271 - protein_coding KNOWN OTTHUMG00000171345.2 12817 5472 19 ENSG00000170099.5 SERPINA6 chr14 94304248 94323394 - protein_coding KNOWN OTTHUMG00000171346.1 19147 1852 12 ENSG00000258597.2 SERPINA2 chr14 94363714 94366698 - polymorphic_pseudogene KNOWN OTTHUMG00000171347.2 2985 990 3 ENSG00000197249.11 SERPINA1 chr14 94376747 94390693 - protein_coding KNOWN OTTHUMG00000150355.2 13947 4902 81 ENSG00000256357.1 RP11-349I1.2 chr14 94430633 94464730 + antisense NOVEL OTTHUMG00000167713.1 34098 568 3 ENSG00000186910.3 SERPINA11 chr14 94442464 94452790 - protein_coding KNOWN OTTHUMG00000171348.1 10327 1476 5 ENSG00000170054.13 SERPINA9 chr14 94462717 94479689 - protein_coding KNOWN OTTHUMG00000167710.3 16973 2561 37 ENSG00000231684.3 EIF1P3 chr1 182336001 182336334 + processed_pseudogene KNOWN OTTHUMG00000037404.1 334 334 1 ENSG00000165953.8 SERPINA12 chr14 94487274 94517844 - protein_coding KNOWN OTTHUMG00000171349.1 30571 2276 11 ENSG00000100665.10 SERPINA4 chr14 94561091 94569913 + protein_coding KNOWN OTTHUMG00000170859.1 8823 2338 15 ENSG00000188488.12 SERPINA5 chr14 94561442 94593120 + protein_coding KNOWN OTTHUMG00000170860.2 31679 3775 48 ENSG00000273259.2 SERPINA3 chr14 94592058 94624646 + protein_coding NOVEL OTTHUMG00000186018.1 32589 3067 13 ENSG00000196136.15 SERPINA3 chr14 94612384 94624055 + protein_coding KNOWN OTTHUMG00000029851.7 11672 5000 25 ENSG00000258805.1 ADIPOR1P2 chr14 94633705 94634524 + processed_pseudogene KNOWN OTTHUMG00000170861.1 820 820 1 ENSG00000187483.8 SERPINA13P chr14 94640725 94646994 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000150191.3 6270 1718 8 ENSG00000259140.2 RP11-986E7.2 chr14 94674877 94675829 - processed_pseudogene KNOWN OTTHUMG00000170862.2 953 657 2 ENSG00000239269.1 RPSAP4 chr14 94726288 94727175 + processed_pseudogene KNOWN OTTHUMG00000158121.1 888 888 1 ENSG00000133937.4 GSC chr14 94768216 94770230 - protein_coding KNOWN OTTHUMG00000170864.3 2015 1264 3 ENSG00000135821.15 GLUL chr1 182381704 182392206 - protein_coding KNOWN OTTHUMG00000037407.2 10503 9032 69 ENSG00000240914.1 RPL15P2 chr14 94800849 94801463 - processed_pseudogene KNOWN OTTHUMG00000158125.1 615 615 1 ENSG00000274379.1 RP11-179A9.3 chr14 94918253 94918734 - lincRNA NOVEL OTTHUMG00000170865.1 482 482 1 ENSG00000258933.1 RP11-991C1.1 chr14 94960277 94962976 - lincRNA NOVEL OTTHUMG00000171626.1 2700 737 5 ENSG00000258866.1 RP11-991C1.2 chr14 95048220 95050953 + lincRNA NOVEL OTTHUMG00000171627.1 2734 465 2 ENSG00000100697.13 DICER1 chr14 95086228 95158010 - protein_coding KNOWN OTTHUMG00000166134.4 71783 12294 184 ENSG00000264607.1 MIR3173 chr14 95137919 95137986 - miRNA KNOWN NA 68 68 1 ENSG00000235706.6 DICER1-AS1 chr14 95157645 95179933 + antisense NOVEL OTTHUMG00000150190.3 22289 3722 13 ENSG00000165959.10 CLMN chr14 95181940 95319906 - protein_coding KNOWN OTTHUMG00000171629.2 137967 15701 50 ENSG00000259143.1 CTD-2240H23.2 chr14 95185117 95185854 - sense_overlapping NOVEL OTTHUMG00000171628.1 738 594 2 ENSG00000258615.1 RP11-725G5.3 chr14 95199039 95199345 + unprocessed_pseudogene KNOWN OTTHUMG00000171630.1 307 181 2 ENSG00000203730.2 TEDDM1 chr1 182398117 182400616 - protein_coding KNOWN OTTHUMG00000037398.1 2500 2500 1 ENSG00000258630.1 RP11-725G5.2 chr14 95329584 95335504 + lincRNA NOVEL OTTHUMG00000171631.1 5921 1701 3 ENSG00000276090.1 AL117187.1 chr14 95335840 95335943 + miRNA NOVEL NA 104 104 1 ENSG00000176438.11 SYNE3 chr14 95407266 95475836 - protein_coding KNOWN OTTHUMG00000171632.4 68571 18164 67 ENSG00000258572.1 RP11-1070N10.3 chr14 95516136 95517911 + lincRNA NOVEL OTTHUMG00000171637.1 1776 993 2 ENSG00000247092.5 SNHG10 chr14 95532297 95534872 - antisense KNOWN OTTHUMG00000171635.1 2576 1945 8 ENSG00000252481.1 SCARNA13 chr14 95533355 95533629 - scaRNA KNOWN NA 275 275 1 ENSG00000182512.4 GLRX5 chr14 95533503 95544724 + protein_coding KNOWN OTTHUMG00000171636.1 11222 2845 6 ENSG00000258390.1 RP11-1070N10.4 chr14 95573562 95581956 + lincRNA NOVEL OTTHUMG00000171638.1 8395 1971 5 ENSG00000258927.1 RP11-1070N10.5 chr14 95620914 95643285 + lincRNA NOVEL OTTHUMG00000171639.1 22372 1714 4 ENSG00000270038.1 RP11-1070N10.7 chr14 95644508 95645232 + lincRNA NOVEL OTTHUMG00000184114.1 725 725 1 ENSG00000203729.7 LINC00272 chr1 182407621 182414815 + lincRNA KNOWN OTTHUMG00000037402.2 7195 740 7 ENSG00000187621.13 TCL6 chr14 95650498 95679833 + processed_transcript KNOWN OTTHUMG00000149979.2 29336 10566 62 ENSG00000275033.1 TCL6_2 chr14 95662480 95662598 + misc_RNA NOVEL NA 119 119 1 ENSG00000259084.5 RP11-1070N10.6 chr14 95663256 95692630 + sense_overlapping NOVEL OTTHUMG00000171640.3 29375 3672 30 ENSG00000277468.1 TCL6_3 chr14 95670441 95670577 + misc_RNA NOVEL NA 137 137 1 ENSG00000213231.11 TCL1B chr14 95686417 95692643 + protein_coding KNOWN OTTHUMG00000028912.5 6227 1882 10 ENSG00000100721.9 TCL1A chr14 95709967 95714196 - protein_coding KNOWN OTTHUMG00000171390.2 4230 2236 33 ENSG00000257275.5 RP11-164H13.1 chr14 95711747 95757656 + antisense NOVEL OTTHUMG00000171391.1 45910 3017 9 ENSG00000263357.1 AL133167.1 chr14 95851481 95851590 - miRNA NOVEL NA 110 110 1 ENSG00000258516.1 RP11-185P18.2 chr14 95855548 95866464 - lincRNA NOVEL OTTHUMG00000171394.1 10917 865 4 ENSG00000250366.2 TUNAR chr14 95876392 95925571 + lincRNA NOVEL OTTHUMG00000171392.1 49180 3478 7 ENSG00000270443.1 RP1-223H12.5 chr1 182433893 182434461 - processed_pseudogene KNOWN OTTHUMG00000184454.1 569 195 2 ENSG00000278166.1 AL133167.2 chr14 95973435 95973502 - miRNA NOVEL NA 68 68 1 ENSG00000271358.1 RP11-241N4.2 chr14 96019484 96019765 + processed_pseudogene KNOWN OTTHUMG00000184422.1 282 282 1 ENSG00000227051.5 C14orf132 chr14 96039324 96094080 + lincRNA KNOWN OTTHUMG00000171393.1 54757 7966 11 ENSG00000221236.2 AL137190.1 chr14 96136851 96136943 + miRNA NOVEL NA 93 93 1 ENSG00000168398.6 BDKRB2 chr14 96204679 96244166 + protein_coding KNOWN OTTHUMG00000171408.1 39488 6845 10 ENSG00000258691.1 RP11-404P21.8 chr14 96204844 96263929 + protein_coding NOVEL OTTHUMG00000171409.1 59086 855 7 ENSG00000258412.1 RP11-404P21.5 chr14 96210860 96214818 + sense_intronic NOVEL OTTHUMG00000171410.1 3959 460 2 ENSG00000258788.3 RP11-404P21.9 chr14 96223108 96223347 + processed_pseudogene KNOWN OTTHUMG00000171411.3 240 240 1 ENSG00000259036.1 RP11-404P21.1 chr14 96233431 96234101 - antisense NOVEL OTTHUMG00000171395.1 671 572 2 ENSG00000100739.9 BDKRB1 chr14 96255824 96268967 + protein_coding KNOWN OTTHUMG00000171412.1 13144 2758 11 ENSG00000233537.1 TEDDM2P chr1 182441577 182442362 + unitary_pseudogene KNOWN OTTHUMG00000037405.2 786 786 1 ENSG00000258793.1 RP11-404P21.3 chr14 96259411 96268624 - antisense NOVEL OTTHUMG00000171397.1 9214 738 2 ENSG00000258729.2 RP11-404P21.6 chr14 96275046 96276723 - lincRNA NOVEL OTTHUMG00000171413.1 1678 1678 2 ENSG00000066739.10 ATG2B chr14 96279202 96363870 - protein_coding KNOWN OTTHUMG00000149933.3 84669 14778 70 ENSG00000100744.13 GSKIP chr14 96363452 96387288 + protein_coding KNOWN OTTHUMG00000171420.1 23837 4567 24 ENSG00000222276.1 RNU2-33P chr14 96384624 96384815 + snRNA KNOWN NA 192 192 1 ENSG00000140057.7 AK7 chr14 96392111 96489427 + protein_coding KNOWN OTTHUMG00000171421.1 97317 5001 31 ENSG00000259059.1 PEBP1P1 chr14 96423700 96424209 - processed_pseudogene KNOWN OTTHUMG00000171438.1 510 510 1 ENSG00000240051.1 RPL23AP10 chr14 96456576 96457041 - processed_pseudogene KNOWN OTTHUMG00000158127.1 466 466 1 ENSG00000260806.1 RP11-872J21.3 chr14 96500810 96502321 - antisense NOVEL OTTHUMG00000171440.1 1512 1512 1 ENSG00000090060.16 PAPOLA chr14 96501433 96567111 + protein_coding KNOWN OTTHUMG00000171441.3 65679 12766 180 ENSG00000121446.16 RGSL1 chr1 182450121 182560599 + protein_coding KNOWN OTTHUMG00000035217.9 110479 8575 129 ENSG00000276182.1 RP11-872J21.5 chr14 96537170 96537904 + sense_intronic NOVEL OTTHUMG00000188628.1 735 735 1 ENSG00000258702.1 RP11-433J8.1 chr14 96592733 96595762 + lincRNA NOVEL OTTHUMG00000171454.1 3030 3030 4 ENSG00000223299.1 RN7SKP108 chr14 96638187 96638514 - misc_RNA KNOWN NA 328 328 1 ENSG00000258979.1 RP11-433J8.2 chr14 96741191 96790613 + lincRNA NOVEL OTTHUMG00000171455.2 49423 430 4 ENSG00000100749.6 VRK1 chr14 96797304 96931722 + protein_coding KNOWN OTTHUMG00000171459.1 134419 2744 39 ENSG00000258825.1 AL133168.3 chr14 96931367 96943580 + processed_transcript NOVEL OTTHUMG00000028956.3 12214 254 2 ENSG00000225163.3 LINC00618 chr14 96943579 96945394 + lincRNA NOVEL OTTHUMG00000171460.1 1816 448 5 ENSG00000280070.1 RP11-907D1.3 chr14 96992864 96996601 + TEC KNOWN OTTHUMG00000173003.1 3738 3738 1 ENSG00000259026.1 RP11-907D1.1 chr14 97110416 97119247 - lincRNA NOVEL OTTHUMG00000171462.1 8832 1274 6 ENSG00000258393.1 RP11-907D1.2 chr14 97116355 97121501 + lincRNA NOVEL OTTHUMG00000171463.1 5147 840 4 ENSG00000135828.10 RNASEL chr1 182573634 182589256 - protein_coding KNOWN OTTHUMG00000035213.1 15623 6125 13 ENSG00000259110.1 RP11-359N5.1 chr14 97154857 97158736 + lincRNA NOVEL OTTHUMG00000171464.1 3880 445 2 ENSG00000246084.2 CTD-2506J14.1 chr14 97458816 97581601 + lincRNA NOVEL OTTHUMG00000171465.1 122786 2014 12 ENSG00000281689.1 AL355098.1 chr14 97523095 97523230 + miRNA NOVEL NA 136 136 1 ENSG00000197176.6 RP11-76E12.1 chr14 97632647 97686658 - lincRNA NOVEL OTTHUMG00000171466.2 54012 1938 11 ENSG00000258869.1 RP11-204N11.1 chr14 97749264 97763989 - lincRNA NOVEL OTTHUMG00000171468.1 14726 3104 4 ENSG00000258379.1 RP11-204N11.2 chr14 97786565 97789256 - lincRNA NOVEL OTTHUMG00000171469.1 2692 539 2 ENSG00000246223.7 LINC01550 chr14 97925610 97978124 - lincRNA KNOWN OTTHUMG00000171470.2 52515 5850 19 ENSG00000259097.1 RP11-61O1.1 chr14 98068240 98205143 - lincRNA NOVEL OTTHUMG00000171471.1 136904 542 3 ENSG00000258511.1 RP11-61O1.2 chr14 98136074 98139242 + lincRNA NOVEL OTTHUMG00000171472.1 3169 374 2 ENSG00000222066.1 AL163760.1 chr14 98331632 98331750 - miRNA NOVEL NA 119 119 1 ENSG00000276839.1 Metazoa_SRP chr1 182576772 182577040 - misc_RNA NOVEL NA 269 269 1 ENSG00000241757.3 RN7SL714P chr14 98351367 98351664 - misc_RNA KNOWN NA 298 298 1 ENSG00000258795.1 RP11-1082A3.1 chr14 98497132 98514798 + lincRNA NOVEL OTTHUMG00000171473.1 17667 423 3 ENSG00000176605.6 C14orf177 chr14 98711613 98717761 + protein_coding KNOWN OTTHUMG00000167745.2 6149 1416 11 ENSG00000237342.1 AL132796.1 chr14 98844896 98845597 + lincRNA NOVEL OTTHUMG00000150113.1 702 479 3 ENSG00000278990.1 RP11-1127D7.2 chr14 98916902 98917801 - TEC KNOWN OTTHUMG00000173004.1 900 900 1 ENSG00000259119.1 RP11-1127D7.1 chr14 98925137 98927805 - lincRNA NOVEL OTTHUMG00000171474.1 2669 1851 2 ENSG00000232573.1 RPL3P4 chr14 98972879 98973301 - processed_pseudogene KNOWN OTTHUMG00000028964.2 423 423 1 ENSG00000234648.1 AL162151.3 chr14 98973314 98973471 + processed_pseudogene KNOWN OTTHUMG00000060744.1 158 158 1 ENSG00000229402.1 AL162151.4 chr14 99158416 99159669 + antisense NOVEL OTTHUMG00000150114.1 1254 561 2 ENSG00000127152.16 BCL11B chr14 99169287 99271524 - protein_coding KNOWN OTTHUMG00000028967.3 102238 7855 9 ENSG00000225630.1 MTND2P28 chr1 629640 630683 + unprocessed_pseudogene KNOWN OTTHUMG00000002336.1 1044 1044 1 ENSG00000243539.3 RN7SL649P chr1 12036740 12037014 - misc_RNA KNOWN NA 275 275 1 ENSG00000143333.6 RGS16 chr1 182598623 182604408 - protein_coding KNOWN OTTHUMG00000035212.1 5786 2427 5 ENSG00000235785.1 AL109767.1 chr14 99262948 99264735 + antisense NOVEL OTTHUMG00000150112.1 1788 564 3 ENSG00000258383.1 CTD-2200A16.1 chr14 99324799 99332015 - lincRNA NOVEL OTTHUMG00000171475.1 7217 208 2 ENSG00000183576.11 SETD3 chr14 99397746 99480889 - protein_coding KNOWN OTTHUMG00000028970.6 83144 5188 72 ENSG00000272439.1 U6 chr14 99444306 99444412 + snRNA NOVEL NA 107 107 1 ENSG00000090061.16 CCNK chr14 99481169 99535044 + protein_coding KNOWN OTTHUMG00000171495.1 53876 8220 55 ENSG00000205476.7 CCDC85C chr14 99500180 99604026 - protein_coding KNOWN OTTHUMG00000171506.2 103847 17449 37 ENSG00000258749.1 RP11-688G15.3 chr14 99512501 99513576 + antisense NOVEL OTTHUMG00000171507.1 1076 889 2 ENSG00000200506.1 Y_RNA chr14 99583017 99583118 + misc_RNA NOVEL NA 102 102 1 ENSG00000247970.2 RP11-543C4.1 chr14 99604556 99625740 + lincRNA NOVEL OTTHUMG00000171508.1 21185 1039 2 ENSG00000182218.8 HHIPL1 chr14 99645110 99680569 + protein_coding KNOWN OTTHUMG00000171509.1 35460 7836 17 ENSG00000261504.1 RP11-317P15.4 chr1 182615254 182616629 + lincRNA NOVEL OTTHUMG00000176155.1 1376 1376 1 ENSG00000036530.7 CYP46A1 chr14 99684304 99727301 + protein_coding KNOWN OTTHUMG00000171510.2 42998 9352 64 ENSG00000258672.1 RP11-543C4.3 chr14 99691445 99693648 - lincRNA NOVEL OTTHUMG00000171511.1 2204 493 3 ENSG00000066629.15 EML1 chr14 99737693 99942060 + protein_coding KNOWN OTTHUMG00000171529.1 204368 8899 156 ENSG00000199836.1 RNU1-47P chr14 99945315 99945477 + snRNA KNOWN NA 163 163 1 ENSG00000271198.1 VDAC3P1 chr14 99964529 99965378 + processed_pseudogene KNOWN OTTHUMG00000184603.1 850 850 1 ENSG00000196405.11 EVL chr14 99971449 100144236 + protein_coding KNOWN OTTHUMG00000171530.2 172788 10621 144 ENSG00000242888.1 RP11-436M15.1 chr14 99974336 99975149 - processed_pseudogene KNOWN OTTHUMG00000158132.1 814 814 1 ENSG00000258693.1 RP11-436M15.3 chr14 99977115 99978098 - lincRNA NOVEL OTTHUMG00000171531.1 984 386 2 ENSG00000258560.1 CTD-2376I20.1 chr14 100052803 100074878 - antisense NOVEL OTTHUMG00000171536.2 22076 548 2 ENSG00000265154.1 MIR151B chr14 100109419 100109514 - miRNA KNOWN NA 96 96 1 ENSG00000135824.11 RGS8 chr1 182641816 182684576 - protein_coding KNOWN OTTHUMG00000035219.5 42761 6685 42 ENSG00000199082.1 MIR342 chr14 100109655 100109753 + miRNA KNOWN NA 99 99 1 ENSG00000168350.7 DEGS2 chr14 100143957 100160163 - protein_coding KNOWN OTTHUMG00000171537.2 16207 4466 7 ENSG00000258982.1 RP11-638I2.4 chr14 100207407 100238555 - antisense NOVEL OTTHUMG00000171545.1 31149 331 2 ENSG00000100811.9 YY1 chr14 100238298 100282792 + protein_coding KNOWN OTTHUMG00000150479.2 44495 8720 17 ENSG00000258904.1 RP11-638I2.2 chr14 100263781 100265405 + sense_intronic NOVEL OTTHUMG00000171546.1 1625 533 2 ENSG00000259052.1 AL157871.2 chr14 100279959 100291456 - sense_overlapping NOVEL OTTHUMG00000029016.3 11498 206 2 ENSG00000197119.11 SLC25A29 chr14 100291111 100306547 - protein_coding KNOWN OTTHUMG00000171569.2 15437 7451 63 ENSG00000258504.2 RP11-638I2.6 chr14 100291117 100294656 + lincRNA NOVEL OTTHUMG00000171570.1 3540 693 4 ENSG00000198984.1 MIR345 chr14 100307859 100307956 + miRNA KNOWN NA 98 98 1 ENSG00000243976.2 RN7SL523P chr14 100319073 100319370 - misc_RNA KNOWN NA 298 298 1 ENSG00000227181.1 RP11-317P15.3 chr1 182712862 182714544 + lincRNA NOVEL OTTHUMG00000041043.1 1683 259 2 ENSG00000263519.1 AL157871.1 chr14 100322828 100322933 - miRNA NOVEL NA 106 106 1 ENSG00000140107.10 SLC25A47 chr14 100323337 100330378 + protein_coding KNOWN OTTHUMG00000171571.1 7042 1799 12 ENSG00000140105.16 WARS chr14 100333788 100376805 - protein_coding KNOWN OTTHUMG00000171572.2 43018 6358 238 ENSG00000258666.1 RP11-638I2.8 chr14 100333790 100354061 + antisense NOVEL OTTHUMG00000171582.1 20272 385 2 ENSG00000258521.1 RP11-638I2.9 chr14 100339832 100340554 + antisense NOVEL OTTHUMG00000171583.1 723 552 2 ENSG00000258581.2 RP11-638I2.10 chr14 100366628 100366920 + processed_pseudogene KNOWN OTTHUMG00000171584.2 293 293 1 ENSG00000176473.12 WDR25 chr14 100376418 100530303 + protein_coding KNOWN OTTHUMG00000171585.1 153886 4218 57 ENSG00000258620.1 RP11-362L22.1 chr14 100406599 100407613 + sense_intronic NOVEL OTTHUMG00000171586.1 1015 606 5 ENSG00000258500.2 CTD-2062F14.2 chr14 100480952 100481274 + transcribed_processed_pseudogene KNOWN OTTHUMG00000171588.2 323 323 1 ENSG00000253075.1 RN7SKP92 chr14 100487544 100487787 + misc_RNA KNOWN NA 244 244 1 ENSG00000271269.1 RP11-317P15.6 chr1 182733792 182734779 + processed_pseudogene KNOWN OTTHUMG00000184455.1 988 408 2 ENSG00000183092.14 BEGAIN chr14 100537149 100587413 - protein_coding KNOWN OTTHUMG00000171589.1 50265 7073 57 ENSG00000259031.1 CTD-2062F14.3 chr14 100538939 100540409 + lincRNA NOVEL OTTHUMG00000171590.1 1471 553 2 ENSG00000258576.1 CTD-2644I21.1 chr14 100587775 100589326 - sense_overlapping NOVEL OTTHUMG00000171591.1 1552 466 2 ENSG00000196273.6 LINC00523 chr14 100657250 100676069 + lincRNA NOVEL OTTHUMG00000171592.1 18820 3311 15 ENSG00000258717.1 RP11-566J3.2 chr14 100675930 100679884 - lincRNA NOVEL OTTHUMG00000171593.1 3955 722 2 ENSG00000185559.12 DLK1 chr14 100725705 100738224 + protein_coding KNOWN OTTHUMG00000171600.2 12520 5312 22 ENSG00000214548.13 MEG3 chr14 100779410 100861031 + lincRNA KNOWN OTTHUMG00000029052.8 81622 15769 141 ENSG00000266461.1 MIR2392 chr14 100814491 100814574 + miRNA KNOWN NA 84 84 1 ENSG00000275161.1 Mico1 chr14 100816041 100816244 + misc_RNA NOVEL NA 204 204 1 ENSG00000274884.1 MEG3_1 chr14 100826284 100826370 + misc_RNA NOVEL NA 87 87 1 ENSG00000135838.12 NPL chr1 182789293 182830384 + protein_coding KNOWN OTTHUMG00000035321.3 41092 4975 112 ENSG00000276919.1 MEG3_2 chr14 100829350 100829454 + misc_RNA NOVEL NA 105 105 1 ENSG00000258663.1 RP11-123M6.2 chr14 100834432 100861026 - antisense NOVEL OTTHUMG00000171671.1 26595 289 2 ENSG00000211574.1 MIR770 chr14 100852390 100852487 + miRNA KNOWN NA 98 98 1 ENSG00000207989.2 MIR493 chr14 100869055 100869164 + miRNA KNOWN NA 110 110 1 ENSG00000199151.2 MIR337 chr14 100874495 100874603 + miRNA KNOWN NA 109 109 1 ENSG00000254656.1 RTL1 chr14 100880655 100884847 - protein_coding KNOWN OTTHUMG00000167573.1 4193 4193 1 ENSG00000208001.1 MIR431 chr14 100881007 100881120 + miRNA KNOWN NA 114 114 1 ENSG00000207569.1 MIR433 chr14 100881883 100882006 + miRNA KNOWN NA 124 124 1 ENSG00000207608.2 MIR127 chr14 100882965 100883075 + miRNA KNOWN NA 111 111 1 ENSG00000272458.1 MIR432 chr14 100884483 100884576 + miRNA KNOWN NA 94 94 1 ENSG00000135829.15 DHX9 chr1 182839369 182887751 + protein_coding KNOWN OTTHUMG00000035337.5 48383 5645 64 ENSG00000207942.1 MIR136 chr14 100884697 100884788 + miRNA KNOWN NA 92 92 1 ENSG00000258399.5 MEG8 chr14 100894770 100935999 + lincRNA NOVEL OTTHUMG00000171625.1 41230 2217 25 ENSG00000276225.1 MEG8_1 chr14 100894817 100894913 + misc_RNA NOVEL NA 97 97 1 ENSG00000275662.1 SNORD112 chr14 100897920 100897996 + snoRNA KNOWN NA 77 77 1 ENSG00000275134.1 MEG8_2 chr14 100898958 100899079 + misc_RNA NOVEL NA 122 122 1 ENSG00000221077.1 AL117190.1 chr14 100903597 100903716 + miRNA NOVEL NA 120 120 1 ENSG00000199005.3 MIR370 chr14 100911166 100911275 + miRNA KNOWN NA 110 110 1 ENSG00000202191.1 SNORD113-1 chr14 100924824 100924892 + snoRNA KNOWN NA 69 69 1 ENSG00000212384.1 SNORD113-2 chr14 100927342 100927413 + snoRNA KNOWN NA 72 72 1 ENSG00000201700.3 SNORD113-3 chr14 100929919 100929990 + snoRNA KNOWN NA 72 72 1 ENSG00000157060.13 SHCBP1L chr1 182899865 182953525 - protein_coding KNOWN OTTHUMG00000035419.4 53661 2982 51 ENSG00000201672.1 SNORD113-4 chr14 100936491 100936565 + snoRNA KNOWN NA 75 75 1 ENSG00000225746.7 SNHG23 chr14 100937401 100960199 + lincRNA NOVEL OTTHUMG00000029060.3 22799 2986 48 ENSG00000272474.1 SNORD113-5 chr14 100938187 100938264 + snoRNA KNOWN NA 78 78 1 ENSG00000200215.3 SNORD113-6 chr14 100939556 100939630 + snoRNA KNOWN NA 75 75 1 ENSG00000200632.1 SNORD113-7 chr14 100941126 100941202 + snoRNA KNOWN NA 77 77 1 ENSG00000200367.1 SNORD113-8 chr14 100943451 100943524 + snoRNA KNOWN NA 74 74 1 ENSG00000201950.1 SNORD113-9 chr14 100945649 100945720 + snoRNA KNOWN NA 72 72 1 ENSG00000199575.1 SNORD114-1 chr14 100949833 100949904 + snoRNA KNOWN NA 72 72 1 ENSG00000200823.1 SNORD114-2 chr14 100951856 100951933 + snoRNA KNOWN NA 78 78 1 ENSG00000201839.1 SNORD114-3 chr14 100953349 100953423 + snoRNA KNOWN NA 75 75 1 ENSG00000224040.1 HMGN1P4 chr1 182942115 182942404 - processed_pseudogene KNOWN OTTHUMG00000041119.1 290 290 1 ENSG00000200832.1 SNORD114-4 chr14 100954374 100954448 + snoRNA KNOWN NA 75 75 1 ENSG00000199798.1 SNORD114-5 chr14 100955370 100955439 + snoRNA KNOWN NA 70 70 1 ENSG00000200150.1 SNORD113 chr14 100956240 100956312 + snoRNA NOVEL NA 73 73 1 ENSG00000201263.1 SNORD114-6 chr14 100957166 100957237 + snoRNA KNOWN NA 72 72 1 ENSG00000232018.4 AL132709.8 chr14 100960509 100967040 + lincRNA NOVEL OTTHUMG00000067435.4 6532 1342 6 ENSG00000199390.1 SNORD114-7 chr14 100963054 100963130 + snoRNA KNOWN NA 77 77 1 ENSG00000201240.1 SNORD114-9 chr14 100966029 100966100 + snoRNA KNOWN NA 72 72 1 ENSG00000200279.1 SNORD114-10 chr14 100967052 100967123 + snoRNA KNOWN NA 72 72 1 ENSG00000271417.2 SNHG24 chr14 100967652 100987280 + lincRNA NOVEL OTTHUMG00000184365.2 19629 1634 12 ENSG00000200608.1 SNORD114-11 chr14 100968111 100968185 + snoRNA KNOWN NA 75 75 1 ENSG00000199837.1 RNA5SP71 chr1 182944365 182944490 - rRNA KNOWN NA 126 126 1 ENSG00000202270.1 SNORD114-12 chr14 100968948 100969022 + snoRNA KNOWN NA 75 75 1 ENSG00000201247.1 SNORD114-13 chr14 100969879 100969952 + snoRNA KNOWN NA 74 74 1 ENSG00000199593.1 SNORD114-14 chr14 100972103 100972177 + snoRNA KNOWN NA 75 75 1 ENSG00000201557.1 SNORD114-15 chr14 100972670 100972741 + snoRNA KNOWN NA 72 72 1 ENSG00000199914.1 SNORD114-16 chr14 100973595 100973664 + snoRNA KNOWN NA 70 70 1 ENSG00000201569.1 SNORD114-17 chr14 100974806 100974880 + snoRNA KNOWN NA 75 75 1 ENSG00000202142.1 SNORD114-18 chr14 100975825 100975896 + snoRNA KNOWN NA 72 72 1 ENSG00000199942.1 SNORD114-19 chr14 100976477 100976551 + snoRNA KNOWN NA 75 75 1 ENSG00000201500.1 SNORD113 chr14 100977389 100977466 + snoRNA NOVEL NA 78 78 1 ENSG00000201036.1 SNORD113 chr14 100979002 100979090 + snoRNA NOVEL NA 89 89 1 ENSG00000120949.13 TNFRSF8 chr1 12063377 12144207 + protein_coding KNOWN OTTHUMG00000001827.4 80831 3738 52 ENSG00000281615.1 AL450304.2 chr1 182944402 182944454 - miRNA NOVEL NA 53 53 1 ENSG00000201710.1 SNORD113 chr14 100979992 100980066 + snoRNA NOVEL NA 75 75 1 ENSG00000202048.1 SNORD114-20 chr14 100981004 100981075 + snoRNA KNOWN NA 72 72 1 ENSG00000272344.1 SNORD114-21 chr14 100981975 100982046 + snoRNA KNOWN NA 72 72 1 ENSG00000202293.1 SNORD114-22 chr14 100982926 100982997 + snoRNA KNOWN NA 72 72 1 ENSG00000200406.1 SNORD114-23 chr14 100983876 100983947 + snoRNA KNOWN NA 72 72 1 ENSG00000201899.1 SNORD114-24 chr14 100984777 100984848 + snoRNA KNOWN NA 72 72 1 ENSG00000200612.1 SNORD114-25 chr14 100986057 100986128 + snoRNA KNOWN NA 72 72 1 ENSG00000200413.1 SNORD114-26 chr14 100987046 100987117 + snoRNA KNOWN NA 72 72 1 ENSG00000200636.1 SNORD114-27 chr14 100988161 100988230 + snoRNA KNOWN NA 70 70 1 ENSG00000200480.1 SNORD114-28 chr14 100989130 100989201 + snoRNA KNOWN NA 72 72 1 ENSG00000226570.2 RP11-505O17.1 chr1 182955390 182956148 - processed_pseudogene KNOWN OTTHUMG00000035416.2 759 759 1 ENSG00000201689.1 SNORD114-29 chr14 100990091 100990160 + snoRNA KNOWN NA 70 70 1 ENSG00000201318.1 SNORD114-30 chr14 100991919 100991990 + snoRNA KNOWN NA 72 72 1 ENSG00000200089.1 SNORD114-31 chr14 100993236 100993310 + snoRNA KNOWN NA 75 75 1 ENSG00000222095.1 SNORD113 chr14 100994257 100994330 + snoRNA NOVEL NA 74 74 1 ENSG00000222185.1 SNORD113 chr14 100998467 100998541 + snoRNA NOVEL NA 75 75 1 ENSG00000199088.4 MIR379 chr14 101022051 101022159 + miRNA KNOWN NA 109 109 1 ENSG00000199109.3 MIR411 chr14 101023319 101023429 + miRNA KNOWN NA 111 111 1 ENSG00000207749.3 MIR299 chr14 101023780 101023890 + miRNA KNOWN NA 111 111 1 ENSG00000198982.3 AL132709.2 chr14 101025000 101025110 + miRNA NOVEL NA 111 111 1 ENSG00000221745.2 MIR1197 chr14 101025550 101025659 + miRNA KNOWN NA 110 110 1 ENSG00000176855.11 KRT18P28 chr1 182959074 182960405 - processed_pseudogene KNOWN OTTHUMG00000035417.2 1332 1332 1 ENSG00000199069.2 MIR323A chr14 101025712 101025819 + miRNA KNOWN NA 108 108 1 ENSG00000211582.1 MIR758 chr14 101026020 101026107 + miRNA KNOWN NA 88 88 1 ENSG00000207761.2 MIR329-1 chr14 101026753 101026895 + miRNA KNOWN NA 143 143 1 ENSG00000207762.1 MIR329-2 chr14 101027100 101027183 + miRNA KNOWN NA 84 84 1 ENSG00000194717.3 MIR494 chr14 101029611 101029719 + miRNA KNOWN NA 109 109 1 ENSG00000221036.4 MIR1193 chr14 101030041 101030153 + miRNA KNOWN NA 113 113 1 ENSG00000212040.2 MIR543 chr14 101031963 101032070 + miRNA KNOWN NA 108 108 1 ENSG00000207743.2 MIR495 chr14 101033734 101033841 + miRNA KNOWN NA 108 108 1 ENSG00000265032.2 AL132709.3 chr14 101039338 101039437 + miRNA NOVEL NA 100 100 1 ENSG00000277933.1 AL132709.7 chr14 101039662 101039771 + miRNA NOVEL NA 110 110 1 ENSG00000264768.1 AL450304.1 chr1 182959485 182959575 - miRNA NOVEL NA 91 91 1 ENSG00000281098.1 AL132709.9 chr14 101040052 101040162 + miRNA NOVEL NA 111 111 1 ENSG00000207934.1 MIR654 chr14 101040219 101040299 + miRNA KNOWN NA 81 81 1 ENSG00000277780.1 MIR376B chr14 101040427 101040536 + miRNA KNOWN NA 110 110 1 ENSG00000277815.1 AL132709.6 chr14 101040755 101040864 + miRNA NOVEL NA 110 110 1 ENSG00000215957.1 MIR300 chr14 101041363 101041445 + miRNA KNOWN NA 83 83 1 ENSG00000221525.1 MIR1185-1 chr14 101042977 101043062 + miRNA KNOWN NA 86 86 1 ENSG00000221614.1 MIR1185-2 chr14 101044198 101044283 + miRNA KNOWN NA 86 86 1 ENSG00000258861.1 MIR381HG chr14 101045157 101051795 + lincRNA NOVEL OTTHUMG00000171633.1 6639 425 3 ENSG00000199020.2 MIR381 chr14 101045898 101046005 + miRNA KNOWN NA 108 108 1 ENSG00000207754.2 MIR487B chr14 101046435 101046544 + miRNA KNOWN NA 110 110 1 ENSG00000207472.1 RNU6-41P chr1 182982212 182982318 - snRNA KNOWN NA 107 107 1 ENSG00000202560.3 MIR539 chr14 101047313 101047416 + miRNA KNOWN NA 104 104 1 ENSG00000216099.2 MIR889 chr14 101047879 101047988 + miRNA KNOWN NA 110 110 1 ENSG00000207587.1 MIR544A chr14 101048658 101048748 + miRNA KNOWN NA 91 91 1 ENSG00000207646.1 MIR655 chr14 101049550 101049646 + miRNA KNOWN NA 97 97 1 ENSG00000265250.2 AL132709.4 chr14 101051993 101052104 + miRNA NOVEL NA 112 112 1 ENSG00000207558.2 MIR487A chr14 101052424 101052533 + miRNA KNOWN NA 110 110 1 ENSG00000207742.2 MIR382 chr14 101054301 101054386 - miRNA KNOWN NA 86 86 1 ENSG00000207993.3 MIR134 chr14 101054687 101054759 + miRNA KNOWN NA 73 73 1 ENSG00000276352.1 AL132709.5 chr14 101055229 101055339 + miRNA NOVEL NA 111 111 1 ENSG00000208027.3 MIR485 chr14 101055407 101055515 + miRNA KNOWN NA 109 109 1 ENSG00000135862.5 LAMC1 chr1 183023460 183145592 + protein_coding KNOWN OTTHUMG00000035418.4 122133 8406 50 ENSG00000208004.2 MIR323B chr14 101056219 101056300 + miRNA KNOWN NA 82 82 1 ENSG00000207978.1 MIR154 chr14 101059755 101059838 + miRNA KNOWN NA 84 84 1 ENSG00000207961.2 MIR496 chr14 101060558 101060667 + miRNA KNOWN NA 110 110 1 ENSG00000199015.3 MIR377 chr14 101062024 101062132 + miRNA KNOWN NA 109 109 1 ENSG00000216179.1 MIR541 chr14 101064495 101064578 + miRNA KNOWN NA 84 84 1 ENSG00000199107.2 MIR409 chr14 101065294 101065405 + miRNA KNOWN NA 112 112 1 ENSG00000199012.2 MIR412 chr14 101065447 101065537 + miRNA KNOWN NA 91 91 1 ENSG00000199025.4 MIR369 chr14 101065598 101065667 + miRNA KNOWN NA 70 70 1 ENSG00000199092.3 MIR410 chr14 101065891 101065998 + miRNA KNOWN NA 108 108 1 ENSG00000207959.1 MIR656 chr14 101066724 101066801 + miRNA KNOWN NA 78 78 1 ENSG00000224468.3 RP11-181K3.4 chr1 183138402 183141282 - antisense NOVEL OTTHUMG00000046152.3 2881 479 3 ENSG00000223403.3 MEG9 chr14 101069911 101072937 + lincRNA KNOWN OTTHUMG00000029067.3 3027 2641 6 ENSG00000230805.5 AL132709.1 chr14 101073869 101077910 - lincRNA NOVEL OTTHUMG00000045024.2 4042 1283 15 ENSG00000259004.1 RP11-8L8.2 chr14 101120856 101123542 + lincRNA NOVEL OTTHUMG00000171672.1 2687 943 2 ENSG00000277754.1 U3 chr14 101145480 101145695 - snoRNA NOVEL NA 216 216 1 ENSG00000258681.1 RP11-8L8.1 chr14 101217372 101218241 - processed_pseudogene KNOWN OTTHUMG00000171673.1 870 870 1 ENSG00000258497.1 CTD-2561F5.1 chr14 101257332 101278318 + lincRNA NOVEL OTTHUMG00000171674.1 20987 2490 2 ENSG00000258460.1 RP11-168L7.1 chr14 101332516 101334331 - lincRNA NOVEL OTTHUMG00000171678.1 1816 447 2 ENSG00000259023.2 LINC00524 chr14 101405987 101407922 - lincRNA NOVEL OTTHUMG00000171679.1 1936 418 2 ENSG00000259082.1 RP11-168L7.3 chr14 101442076 101444315 + lincRNA NOVEL OTTHUMG00000171680.1 2240 516 2 ENSG00000259166.1 RP11-1029J19.2 chr14 101447642 101457117 + lincRNA NOVEL OTTHUMG00000171681.1 9476 513 3 ENSG00000058085.13 LAMC2 chr1 183186238 183244900 + protein_coding KNOWN OTTHUMG00000035520.3 58663 6543 50 ENSG00000258498.5 DIO3OS chr14 101552221 101560431 - lincRNA KNOWN OTTHUMG00000171682.1 8211 5605 36 ENSG00000277601.1 MIR1247 chr14 101560287 101560422 - miRNA KNOWN NA 136 136 1 ENSG00000197406.7 DIO3 chr14 101561351 101563452 + protein_coding KNOWN OTTHUMG00000160681.4 2102 2102 1 ENSG00000258919.1 RP11-1029J19.4 chr14 101628984 101632530 - lincRNA NOVEL OTTHUMG00000171690.1 3547 539 2 ENSG00000258404.1 RP11-1029J19.5 chr14 101634454 101731108 - lincRNA NOVEL OTTHUMG00000171691.2 96655 454 3 ENSG00000241494.1 RP11-796G6.1 chr14 101677943 101678380 + processed_pseudogene KNOWN OTTHUMG00000158133.1 438 438 1 ENSG00000258512.1 LINC00239 chr14 101730437 101732522 + lincRNA KNOWN OTTHUMG00000171596.1 2086 639 4 ENSG00000078304.18 PPP2R5C chr14 101761798 101927989 + protein_coding KNOWN OTTHUMG00000171597.7 166192 14289 192 ENSG00000259088.1 CTD-2017C7.2 chr14 101796555 101810321 - antisense NOVEL OTTHUMG00000171598.1 13767 448 2 ENSG00000207208.1 RNU6-790P chr14 101803227 101803331 + snRNA KNOWN NA 105 105 1 ENSG00000157064.9 NMNAT2 chr1 183248237 183418602 - protein_coding KNOWN OTTHUMG00000035519.2 170366 7165 31 ENSG00000256705.3 CTD-2017C7.1 chr14 101833435 101839531 - antisense NOVEL OTTHUMG00000171599.1 6097 599 2 ENSG00000259161.2 CTD-2017C7.3 chr14 101843394 101844122 - processed_pseudogene KNOWN OTTHUMG00000171643.2 729 729 1 ENSG00000271780.1 RP11-1017G21.5 chr14 101948347 101949425 + lincRNA NOVEL OTTHUMG00000185362.1 1079 1079 1 ENSG00000272444.1 RP11-1017G21.6 chr14 101952416 101953063 + lincRNA NOVEL OTTHUMG00000185363.1 648 648 1 ENSG00000197102.9 DYNC1H1 chr14 101964528 102050792 + protein_coding KNOWN OTTHUMG00000171644.3 86265 15826 117 ENSG00000259013.2 RP11-1017G21.3 chr14 101969364 101969601 - processed_pseudogene KNOWN OTTHUMG00000171645.2 238 238 1 ENSG00000258959.1 RP11-1017G21.4 chr14 102036315 102066228 - antisense NOVEL OTTHUMG00000171646.2 29914 1240 7 ENSG00000240457.3 RN7SL472P chr14 102077180 102077472 - misc_RNA KNOWN NA 293 293 1 ENSG00000080824.17 HSP90AA1 chr14 102080738 102139699 - protein_coding KNOWN OTTHUMG00000171752.5 58962 5248 48 ENSG00000140153.16 WDR20 chr14 102139503 102224847 + protein_coding KNOWN OTTHUMG00000171753.4 85345 7328 65 ENSG00000233562.1 RP11-548N1.1 chr1 183266602 183267285 + processed_pseudogene KNOWN OTTHUMG00000035518.1 684 684 1 ENSG00000080823.20 MOK chr14 102224500 102305200 - protein_coding KNOWN OTTHUMG00000164896.7 80701 11009 237 ENSG00000022976.14 ZNF839 chr14 102317377 102342702 + protein_coding KNOWN OTTHUMG00000171864.3 25326 5590 72 ENSG00000280608.1 AL137229.1 chr14 102340969 102341069 + miRNA NOVEL NA 101 101 1 ENSG00000100865.13 CINP chr14 102341102 102362916 - protein_coding KNOWN OTTHUMG00000171775.3 21815 5344 40 ENSG00000196663.14 TECPR2 chr14 102362963 102502481 + protein_coding KNOWN OTTHUMG00000171776.2 139519 9384 57 ENSG00000212330.1 RNU6-244P chr14 102501676 102501779 + snRNA KNOWN NA 104 104 1 ENSG00000156381.7 ANKRD9 chr14 102501760 102509799 - protein_coding KNOWN OTTHUMG00000171777.3 8040 7215 15 ENSG00000266015.1 MIR4309 chr14 102539644 102539726 + miRNA KNOWN NA 83 83 1 ENSG00000259230.1 CTD-2555C10.3 chr14 102545254 102555826 + lincRNA NOVEL OTTHUMG00000171913.1 10573 1603 3 ENSG00000239224.3 RN7SL546P chr14 102582888 102583177 - misc_RNA KNOWN NA 290 290 1 ENSG00000281342.1 Metazoa_SRP chr1 12065002 12065246 - misc_RNA NOVEL NA 245 245 1 ENSG00000232860.6 SMG7-AS1 chr1 183460874 183472265 - processed_transcript NOVEL OTTHUMG00000035521.3 11392 3383 11 ENSG00000089902.9 RCOR1 chr14 102592661 102730576 + protein_coding KNOWN OTTHUMG00000171778.4 137916 6202 19 ENSG00000230988.3 RP11-661D19.1 chr14 102662240 102662708 - processed_pseudogene KNOWN OTTHUMG00000158134.1 469 469 1 ENSG00000202459.1 Y_RNA chr14 102695388 102695495 + misc_RNA NOVEL NA 108 108 1 ENSG00000259508.1 RP11-661D19.3 chr14 102770040 102774791 - lincRNA NOVEL OTTHUMG00000171914.1 4752 1006 4 ENSG00000131323.13 TRAF3 chr14 102777476 102911500 + protein_coding KNOWN OTTHUMG00000171902.1 134025 8263 74 ENSG00000206969.1 RNU6-1316P chr14 102865856 102865963 + snRNA KNOWN NA 108 108 1 ENSG00000211990.1 AL117209.1 chr14 102879621 102879738 + miRNA NOVEL NA 118 118 1 ENSG00000166126.9 AMN chr14 102922656 102933596 + protein_coding KNOWN OTTHUMG00000171897.1 10941 4646 44 ENSG00000198752.8 CDC42BPB chr14 102932379 103057462 - protein_coding KNOWN OTTHUMG00000171898.1 125084 7958 67 ENSG00000259515.1 RP11-365N19.2 chr14 102933574 102937177 + antisense NOVEL OTTHUMG00000171899.1 3604 828 2 ENSG00000116698.19 SMG7 chr1 183472216 183598246 + protein_coding KNOWN OTTHUMG00000035221.8 126031 8317 171 ENSG00000213176.4 RPL13P6 chr14 103041469 103042094 + processed_pseudogene KNOWN OTTHUMG00000158135.1 626 626 1 ENSG00000259444.1 RP11-736N17.8 chr14 103094723 103098885 + sense_overlapping NOVEL OTTHUMG00000171900.1 4163 386 2 ENSG00000205436.6 EXOC3L4 chr14 103100144 103110559 + protein_coding KNOWN OTTHUMG00000171888.1 10416 3480 39 ENSG00000259717.1 LINC00677 chr14 103120847 103123007 - lincRNA KNOWN OTTHUMG00000171889.1 2161 584 4 ENSG00000185215.7 TNFAIP2 chr14 103123442 103137439 + protein_coding KNOWN OTTHUMG00000171890.1 13998 5029 75 ENSG00000259374.2 RP11-736N17.4 chr14 103139675 103141959 + transcribed_processed_pseudogene KNOWN OTTHUMG00000171891.1 2285 2285 2 ENSG00000259535.1 RPL21P12 chr14 103148597 103149408 + processed_pseudogene KNOWN OTTHUMG00000171892.1 812 515 2 ENSG00000259525.1 GCSHP2 chr14 103184204 103185039 + processed_pseudogene KNOWN OTTHUMG00000171893.1 836 527 2 ENSG00000251533.2 LINC00605 chr14 103187221 103189028 - lincRNA NOVEL OTTHUMG00000171894.1 1808 1558 3 ENSG00000270705.1 RP11-736N17.9 chr14 103207748 103207789 + processed_pseudogene KNOWN OTTHUMG00000184597.1 42 42 1 ENSG00000265042.1 AL137800.1 chr1 183510675 183510764 - miRNA NOVEL NA 90 90 1 ENSG00000278071.1 RP11-736N17.10 chr14 103208100 103208876 + lincRNA NOVEL OTTHUMG00000187162.1 777 777 1 ENSG00000242837.1 RPL21P13 chr14 103241492 103241972 + processed_pseudogene KNOWN OTTHUMG00000158137.1 481 481 1 ENSG00000270938.1 RAP2CP1 chr14 103279223 103279955 + transcribed_processed_pseudogene KNOWN OTTHUMG00000184396.1 733 733 2 ENSG00000240624.1 RP11-45P15.2 chr14 103282933 103283468 + processed_pseudogene KNOWN OTTHUMG00000158139.1 536 536 1 ENSG00000259775.1 RP11-45P15.4 chr14 103331674 103332367 - antisense NOVEL OTTHUMG00000173006.1 694 694 1 ENSG00000100664.9 EIF5 chr14 103333544 103345025 + protein_coding KNOWN OTTHUMG00000171839.2 11482 8505 95 ENSG00000272533.1 SNORA28 chr14 103337849 103337974 + snoRNA KNOWN NA 126 126 1 ENSG00000259428.1 HMGB3P26 chr14 103364239 103364820 - processed_pseudogene KNOWN OTTHUMG00000171840.1 582 582 1 ENSG00000243904.1 RP11-600F24.1 chr14 103374033 103374916 - processed_pseudogene KNOWN OTTHUMG00000158144.1 884 884 1 ENSG00000075413.16 MARK3 chr14 103385392 103503831 + protein_coding KNOWN OTTHUMG00000171789.3 118440 8891 218 ENSG00000116701.13 NCF2 chr1 183555563 183590876 - protein_coding KNOWN OTTHUMG00000035329.3 35314 2928 73 ENSG00000244691.1 RPL10AP1 chr14 103412119 103412761 - processed_pseudogene KNOWN OTTHUMG00000158148.1 643 643 1 ENSG00000166165.11 CKB chr14 103519659 103523111 - protein_coding KNOWN OTTHUMG00000171786.1 3453 2669 64 ENSG00000260285.1 RP11-600F24.7 chr14 103525010 103529072 - antisense NOVEL OTTHUMG00000172764.2 4063 4063 1 ENSG00000166166.11 TRMT61A chr14 103529184 103537073 + protein_coding KNOWN OTTHUMG00000171762.1 7890 3229 7 ENSG00000252469.1 RNU7-160P chr14 103550345 103550406 + snRNA KNOWN NA 62 62 1 ENSG00000258851.1 RP11-894P9.2 chr14 103553421 103561877 + antisense NOVEL OTTHUMG00000171735.1 8457 553 2 ENSG00000166170.9 BAG5 chr14 103556544 103562831 - protein_coding KNOWN OTTHUMG00000171763.1 6288 5271 8 ENSG00000126214.19 KLC1 chr14 103561896 103714249 + protein_coding KNOWN OTTHUMG00000169227.4 152354 19251 263 ENSG00000256500.5 RP11-73M18.2 chr14 103562962 103685924 + protein_coding PUTATIVE OTTHUMG00000169226.3 122963 2505 18 ENSG00000256053.6 APOPT1 chr14 103562962 103607523 + protein_coding KNOWN OTTHUMG00000153929.2 44562 3932 66 ENSG00000162704.14 ARPC5 chr1 183620846 183635757 - protein_coding KNOWN OTTHUMG00000035326.4 14912 10624 16 ENSG00000201184.1 RNU4-68P chr14 103567405 103567545 + snRNA KNOWN NA 141 141 1 ENSG00000246451.2 RP11-894P9.1 chr14 103682362 103684015 - antisense NOVEL OTTHUMG00000171724.1 1654 1404 2 ENSG00000270108.1 RP11-73M18.6 chr14 103687576 103688127 + sense_intronic NOVEL OTTHUMG00000183943.1 552 552 1 ENSG00000269910.1 RP11-73M18.10 chr14 103694516 103695050 - antisense NOVEL OTTHUMG00000183944.1 535 535 1 ENSG00000269940.1 RP11-73M18.7 chr14 103694560 103695170 + sense_intronic NOVEL OTTHUMG00000183945.1 611 611 1 ENSG00000269958.1 RP11-73M18.8 chr14 103696353 103697163 + sense_intronic NOVEL OTTHUMG00000183946.1 811 811 1 ENSG00000126215.12 XRCC3 chr14 103697609 103715504 - protein_coding KNOWN OTTHUMG00000169228.4 17896 7507 99 ENSG00000100711.12 ZFYVE21 chr14 103715730 103733668 + protein_coding KNOWN OTTHUMG00000171651.2 17939 8390 48 ENSG00000253096.1 Y_RNA chr14 103725728 103725825 - misc_RNA NOVEL NA 98 98 1 ENSG00000088808.15 PPP1R13B chr14 103733752 103847590 - protein_coding KNOWN OTTHUMG00000171647.1 113839 9031 99 ENSG00000143344.14 RGL1 chr1 183636085 183928531 + protein_coding KNOWN OTTHUMG00000035328.3 292447 5305 37 ENSG00000270591.1 RP11-73M18.11 chr14 103762803 103763277 + transcribed_processed_pseudogene KNOWN OTTHUMG00000184608.1 475 475 2 ENSG00000202275.1 SNORD51 chr14 103797272 103797348 - snoRNA NOVEL NA 77 77 1 ENSG00000258735.1 LINC00637 chr14 103847721 103858049 + lincRNA KNOWN OTTHUMG00000171648.1 10329 2056 3 ENSG00000258534.1 CTD-2134A5.4 chr14 103854366 103880111 - lincRNA NOVEL OTTHUMG00000171649.1 25746 582 4 ENSG00000258914.1 CTD-2134A5.3 chr14 103875055 103877478 + lincRNA NOVEL OTTHUMG00000171650.1 2424 127 2 ENSG00000156411.8 C14orf2 chr14 103912288 103928269 - protein_coding KNOWN OTTHUMG00000171601.1 15982 3415 43 ENSG00000156414.17 TDRD9 chr14 103928462 104052667 + protein_coding KNOWN OTTHUMG00000152876.3 124206 5480 114 ENSG00000227729.3 RD3L chr14 103940426 103942308 - protein_coding KNOWN OTTHUMG00000152877.3 1883 1201 3 ENSG00000264439.1 AL136001.1 chr14 103980798 103980883 - miRNA NOVEL NA 86 86 1 ENSG00000242894.3 RN7SL634P chr14 104013642 104013933 + misc_RNA KNOWN NA 292 292 1 ENSG00000173627.7 APOBEC4 chr1 183646404 183653316 - protein_coding KNOWN OTTHUMG00000035459.2 6913 2653 4 ENSG00000166183.14 ASPG chr14 104085679 104115581 + protein_coding KNOWN OTTHUMG00000170045.3 29903 6125 62 ENSG00000207568.1 MIR203A chr14 104117405 104117514 + miRNA KNOWN NA 110 110 1 ENSG00000258748.1 CTD-2223O18.1 chr14 104137150 104137898 - antisense NOVEL OTTHUMG00000171595.1 749 462 2 ENSG00000066735.13 KIF26A chr14 104138723 104180894 + protein_coding KNOWN OTTHUMG00000154986.2 42172 6756 29 ENSG00000258913.1 RP11-260M19.2 chr14 104223584 104288069 + lincRNA NOVEL OTTHUMG00000170825.2 64486 1474 7 ENSG00000258598.1 RP11-260M19.1 chr14 104376530 104378951 - lincRNA NOVEL OTTHUMG00000170826.1 2422 518 3 ENSG00000222761.1 RNU6-684P chr14 104400943 104401048 - snRNA KNOWN NA 106 106 1 ENSG00000213159.4 CEND1P1 chr14 104450979 104451433 + processed_pseudogene KNOWN OTTHUMG00000029805.2 455 455 1 ENSG00000258986.5 TMEM179 chr14 104474678 104605647 - protein_coding KNOWN OTTHUMG00000170829.2 130970 4873 18 ENSG00000184601.9 C14orf180 chr14 104579684 104590515 + protein_coding KNOWN OTTHUMG00000029806.3 10832 3036 15 ENSG00000270994.1 RP11-293B7.1 chr1 183709305 183710240 - processed_pseudogene KNOWN OTTHUMG00000184456.1 936 936 1 ENSG00000259037.1 RP11-614O9.1 chr14 104589021 104589847 - antisense NOVEL OTTHUMG00000170828.1 827 543 2 ENSG00000258736.1 RP11-982M15.7 chr14 104653548 104655787 - lincRNA NOVEL OTTHUMG00000170815.1 2240 723 4 ENSG00000260792.1 RP11-982M15.8 chr14 104661120 104665558 - lincRNA NOVEL OTTHUMG00000173007.1 4439 3816 2 ENSG00000265291.1 MIR4710 chr14 104677694 104677749 - miRNA KNOWN NA 56 56 1 ENSG00000256050.2 RP11-982M15.6 chr14 104681146 104684932 + lincRNA NOVEL OTTHUMG00000170816.1 3787 1307 2 ENSG00000203485.11 INF2 chr14 104689606 104722535 + protein_coding KNOWN OTTHUMG00000029811.10 32930 9488 98 ENSG00000258858.1 RP11-982M15.5 chr14 104690091 104691284 - antisense NOVEL OTTHUMG00000170817.1 1194 716 2 ENSG00000185100.9 ADSSL1 chr14 104724186 104747325 + protein_coding KNOWN OTTHUMG00000170818.2 23140 5775 77 ENSG00000184990.11 SIVA1 chr14 104753100 104768494 + protein_coding KNOWN OTTHUMG00000170819.2 15395 4776 28 ENSG00000258430.1 RP11-982M15.2 chr14 104769349 104770271 + antisense NOVEL OTTHUMG00000170804.1 923 663 2 ENSG00000227554.1 RP11-444D13.1 chr1 183754418 183754937 - antisense NOVEL OTTHUMG00000041183.1 520 364 3 ENSG00000142208.14 AKT1 chr14 104769349 104795751 - protein_coding KNOWN OTTHUMG00000170795.3 26403 11162 146 ENSG00000179627.9 ZBTB42 chr14 104800596 104804712 + protein_coding KNOWN OTTHUMG00000170790.1 4117 3905 3 ENSG00000279140.1 RP11-477I4.4 chr14 104815449 104815753 - TEC KNOWN OTTHUMG00000184085.1 305 305 1 ENSG00000258701.1 LINC00638 chr14 104821201 104823718 + lincRNA NOVEL OTTHUMG00000170791.1 2518 2518 1 ENSG00000239365.2 RPS26P49 chr14 104830838 104831171 - processed_pseudogene KNOWN OTTHUMG00000158157.2 334 334 1 ENSG00000196183.5 RPS2P4 chr14 104835997 104836852 - processed_pseudogene KNOWN OTTHUMG00000158156.2 856 856 1 ENSG00000258811.1 CTD-3051D23.1 chr14 104842663 104845916 + lincRNA NOVEL OTTHUMG00000170761.1 3254 3254 1 ENSG00000258593.2 CTD-3051D23.4 chr14 104857792 104858836 - lincRNA NOVEL OTTHUMG00000170762.2 1045 1045 1 ENSG00000099814.14 CEP170B chr14 104865280 104896770 + protein_coding KNOWN OTTHUMG00000170763.2 31491 7199 59 ENSG00000259067.1 CTD-3051D23.3 chr14 104904342 104905204 + lincRNA NOVEL OTTHUMG00000170764.1 863 584 3 ENSG00000273774.1 AL590422.1 chr1 183783322 183783433 - miRNA NOVEL NA 112 112 1 ENSG00000166428.11 PLD4 chr14 104924816 104937790 + protein_coding KNOWN OTTHUMG00000144167.3 12975 6874 38 ENSG00000185567.6 AHNAK2 chr14 104937244 104978357 - protein_coding KNOWN OTTHUMG00000170765.1 41114 18771 18 ENSG00000140104.12 C14orf79 chr14 104985775 105010482 + protein_coding KNOWN OTTHUMG00000170474.1 24708 5225 39 ENSG00000170779.10 CDCA4 chr14 105009573 105021148 - protein_coding KNOWN OTTHUMG00000170767.1 11576 2513 5 ENSG00000183484.10 GPR132 chr14 105049389 105065445 - protein_coding KNOWN OTTHUMG00000140173.3 16057 4200 19 ENSG00000257556.1 RP11-44N21.1 chr14 105093609 105099004 + lincRNA NOVEL OTTHUMG00000170462.1 5396 1177 7 ENSG00000280244.1 RP11-44N21.3 chr14 105110347 105110807 - TEC KNOWN OTTHUMG00000170463.1 461 461 1 ENSG00000258154.1 RP11-44N21.2 chr14 105112690 105112864 - processed_pseudogene KNOWN OTTHUMG00000170464.1 175 175 1 ENSG00000184916.7 JAG2 chr14 105140981 105168824 - protein_coding KNOWN OTTHUMG00000140172.2 27844 6397 68 ENSG00000273778.1 MIR6765 chr14 105150778 105150864 - miRNA KNOWN NA 87 87 1 ENSG00000201135.1 RNU6-777P chr1 12077881 12077984 - snRNA KNOWN NA 104 104 1 ENSG00000198756.9 COLGALT2 chr1 183929854 184037729 - protein_coding KNOWN OTTHUMG00000035460.1 107876 7147 25 ENSG00000257622.1 RP11-44N21.4 chr14 105152194 105181194 - processed_transcript NOVEL OTTHUMG00000170466.1 29001 535 5 ENSG00000183828.13 NUDT14 chr14 105172938 105181323 - protein_coding KNOWN OTTHUMG00000170372.2 8386 1916 25 ENSG00000185024.14 BRF1 chr14 105209286 105315589 - protein_coding KNOWN OTTHUMG00000029884.6 106304 27210 189 ENSG00000184887.12 BTBD6 chr14 105248490 105251093 + protein_coding KNOWN OTTHUMG00000029887.5 2604 2392 24 ENSG00000179364.12 PACS2 chr14 105300563 105398147 + protein_coding KNOWN OTTHUMG00000170450.2 97585 12363 155 ENSG00000279495.1 RP11-521B24.4 chr14 105370418 105372918 + TEC KNOWN OTTHUMG00000170423.1 2501 2501 1 ENSG00000242085.1 RPS20P33 chr14 105374618 105374971 + processed_pseudogene KNOWN OTTHUMG00000158158.1 354 354 1 ENSG00000281275.1 AL928654.1 chr14 105384360 105384461 - miRNA NOVEL NA 102 102 1 ENSG00000226174.5 TEX22 chr14 105398579 105450106 + protein_coding KNOWN OTTHUMG00000156137.21 51528 2837 10 ENSG00000251602.5 RP11-521B24.3 chr14 105416884 105419739 - antisense NOVEL OTTHUMG00000170424.1 2856 2279 5 ENSG00000198860.10 TSEN15 chr1 184051677 184074212 + protein_coding KNOWN OTTHUMG00000035461.4 22536 2443 32 ENSG00000182979.16 MTA1 chr14 105419820 105470729 + protein_coding KNOWN OTTHUMG00000150362.22 50910 6966 194 ENSG00000257270.1 RP11-521B24.5 chr14 105467793 105470617 - antisense NOVEL OTTHUMG00000170425.1 2825 445 2 ENSG00000182809.9 CRIP2 chr14 105472962 105480170 + protein_coding KNOWN OTTHUMG00000029906.5 7209 4837 69 ENSG00000213145.8 CRIP1 chr14 105486317 105488947 + protein_coding KNOWN OTTHUMG00000029908.4 2631 2485 26 ENSG00000257341.4 CRIP1 chr14 105487199 105492267 + protein_coding KNOWN OTTHUMG00000029910.8 5069 1408 35 ENSG00000185347.16 C14orf80 chr14 105489855 105499575 + protein_coding KNOWN OTTHUMG00000170426.3 9721 6698 123 ENSG00000184986.9 TMEM121 chr14 105526603 105530202 + protein_coding KNOWN OTTHUMG00000029912.3 3600 1904 6 ENSG00000230157.1 ATP5G1P1 chr14 105536861 105537239 - processed_pseudogene KNOWN OTTHUMG00000152474.1 379 379 1 ENSG00000234402.1 ELK2BP chr14 105546610 105549694 - unprocessed_pseudogene KNOWN OTTHUMG00000152473.1 3085 1224 2 ENSG00000211890.3 IGHA2 chr14 105586889 105588395 - IG_C_gene KNOWN OTTHUMG00000152472.1 1507 1071 3 ENSG00000199840.1 Y_RNA chr1 184171714 184171823 - misc_RNA NOVEL NA 110 110 1 ENSG00000266597.1 AL928742.1 chr14 105591070 105591129 - miRNA NOVEL NA 60 60 1 ENSG00000227468.4 AL928742.12 chr14 105597691 105600209 - lincRNA NOVEL OTTHUMG00000029923.2 2519 634 9 ENSG00000211891.5 IGHE chr14 105599941 105601728 - IG_C_gene KNOWN OTTHUMG00000152483.1 1788 1412 4 ENSG00000254140.1 RP11-731F5.1 chr14 105601472 105605357 - lincRNA NOVEL OTTHUMG00000164789.1 3886 1003 4 ENSG00000274172.1 MIR8071-1 chr14 105621116 105621180 + miRNA KNOWN NA 65 65 1 ENSG00000211892.3 IGHG4 chr14 105624341 105626066 - IG_C_gene KNOWN OTTHUMG00000152481.2 1726 1119 4 ENSG00000277030.1 MIR8071-2 chr14 105640168 105640232 + miRNA KNOWN NA 65 65 1 ENSG00000211893.3 IGHG2 chr14 105643052 105644790 - IG_C_gene KNOWN OTTHUMG00000152482.1 1739 1132 4 ENSG00000253364.1 RP11-731F5.2 chr14 105644496 105649057 - lincRNA NOVEL OTTHUMG00000164792.1 4562 930 5 ENSG00000275301.1 AL928761.1 chr14 105663828 105663892 + miRNA NOVEL NA 65 65 1 ENSG00000207080.2 Y_RNA chr1 184315658 184315765 + misc_RNA NOVEL NA 108 108 1 ENSG00000253755.1 IGHGP chr14 105664633 105669843 - IG_C_pseudogene KNOWN OTTHUMG00000152493.1 5211 1178 6 ENSG00000211896.5 IGHG1 chr14 105668113 106538344 - IG_C_gene KNOWN OTTHUMG00000152495.2 870232 5138 67 ENSG00000213140.3 ELK2AP chr14 105672308 105673314 - processed_pseudogene KNOWN OTTHUMG00000152492.2 1007 1007 1 ENSG00000253701.2 AL928768.3 chr14 105703961 105704602 - lincRNA NOVEL OTTHUMG00000164793.2 642 362 2 ENSG00000211895.4 IGHA1 chr14 105707118 105708665 - IG_C_gene KNOWN OTTHUMG00000152494.2 1548 1112 3 ENSG00000264024.1 AL901608.1 chr14 105711923 105711992 - miRNA NOVEL NA 70 70 1 ENSG00000253692.3 IGHEP1 chr14 105721794 105722527 - IG_C_pseudogene KNOWN OTTHUMG00000029957.2 734 651 2 ENSG00000278556.1 AL122127.3 chr14 105736956 105737020 + miRNA NOVEL NA 65 65 1 ENSG00000277054.1 AL122127.2 chr14 105765117 105765180 + miRNA NOVEL NA 64 64 1 ENSG00000211897.6 IGHG3 chr14 105769102 106038345 - IG_C_gene KNOWN OTTHUMG00000152539.1 269244 2166 30 ENSG00000231791.1 RP11-382D12.1 chr1 184329071 184332826 + lincRNA NOVEL OTTHUMG00000035458.1 3756 333 2 ENSG00000270371.1 RP11-417P24.1 chr14 105785505 105785831 - processed_pseudogene KNOWN OTTHUMG00000184425.1 327 327 1 ENSG00000211898.6 IGHD chr14 105836765 105845678 - IG_C_gene KNOWN OTTHUMG00000152538.2 8914 1708 13 ENSG00000211899.6 IGHM chr14 105854220 106235572 - IG_C_gene KNOWN OTTHUMG00000152452.4 381353 2384 21 ENSG00000265612.1 MIR4539 chr14 105857513 105857572 - miRNA KNOWN NA 60 60 1 ENSG00000266706.1 AC246787.5 chr14 105857573 105857632 - miRNA NOVEL NA 60 60 1 ENSG00000265517.1 AC246787.3 chr14 105857743 105857802 - miRNA NOVEL NA 60 60 1 ENSG00000263413.2 hsa-mir-4538 chr14 105858165 105858242 - miRNA KNOWN NA 78 78 1 ENSG00000263751.1 AC246787.1 chr14 105858335 105858412 - miRNA NOVEL NA 78 78 1 ENSG00000264781.1 MIR4537 chr14 105859484 105859553 - miRNA KNOWN NA 70 70 1 ENSG00000265714.1 AC246787.4 chr14 105859738 105859804 - miRNA NOVEL NA 67 67 1 ENSG00000244568.3 RN7SL654P chr1 184335658 184335949 + misc_RNA KNOWN NA 292 292 1 ENSG00000211900.2 IGHJ6 chr14 105863198 105863258 - IG_J_gene KNOWN OTTHUMG00000152455.1 61 61 1 ENSG00000237111.1 IGHJ3P chr14 105863416 105863465 - IG_J_pseudogene KNOWN OTTHUMG00000152459.1 50 50 1 ENSG00000242472.1 IGHJ5 chr14 105863814 105863862 - IG_J_gene KNOWN OTTHUMG00000152461.1 49 49 1 ENSG00000240041.1 IGHJ4 chr14 105864215 105864260 - IG_J_gene KNOWN OTTHUMG00000152454.1 46 46 1 ENSG00000242887.1 IGHJ3 chr14 105864587 105864635 - IG_J_gene KNOWN OTTHUMG00000152453.1 49 49 1 ENSG00000237547.1 IGHJ2P chr14 105864793 105864852 - IG_J_pseudogene KNOWN OTTHUMG00000152456.1 60 60 1 ENSG00000211904.2 IGHJ2 chr14 105865199 105865250 - IG_J_gene KNOWN OTTHUMG00000152457.1 52 52 1 ENSG00000211905.1 IGHJ1 chr14 105865407 105865458 - IG_J_gene KNOWN OTTHUMG00000152460.1 52 52 1 ENSG00000236597.1 IGHD7-27 chr14 105865551 105865561 - IG_D_gene KNOWN OTTHUMG00000152435.1 11 11 1 ENSG00000227335.1 IGHJ1P chr14 105865624 105865678 - IG_J_pseudogene KNOWN OTTHUMG00000152458.1 55 55 1 ENSG00000271387.1 RP11-382D12.2 chr1 184385753 184386704 - lincRNA NOVEL OTTHUMG00000185159.1 952 952 1 ENSG00000211907.1 IGHD1-26 chr14 105881034 105881053 - IG_D_gene KNOWN OTTHUMG00000152429.1 20 20 1 ENSG00000225825.1 IGHD6-25 chr14 105881539 105881556 - IG_D_gene KNOWN OTTHUMG00000152436.1 18 18 1 ENSG00000211909.1 IGHD5-24 chr14 105883903 105883922 - IG_D_gene KNOWN OTTHUMG00000152427.1 20 20 1 ENSG00000227196.1 IGHD4-23 chr14 105884870 105884888 - IG_D_gene KNOWN OTTHUMG00000152438.1 19 19 1 ENSG00000211911.1 IGHD3-22 chr14 105886031 105886061 - IG_D_gene KNOWN OTTHUMG00000152434.1 31 31 1 ENSG00000211912.1 IGHD2-21 chr14 105888551 105888578 - IG_D_gene KNOWN OTTHUMG00000152428.1 28 28 1 ENSG00000244620.1 AL122127.25 chr14 105890084 105896577 + lincRNA NOVEL OTTHUMG00000152317.2 6494 485 6 ENSG00000237020.1 IGHD1-20 chr14 105891191 105891207 - IG_D_gene KNOWN OTTHUMG00000152432.1 17 17 1 ENSG00000211914.1 IGHD6-19 chr14 105891699 105891719 - IG_D_gene KNOWN OTTHUMG00000152431.1 21 21 1 ENSG00000211915.1 IGHD5-18 chr14 105893542 105893561 - IG_D_gene KNOWN OTTHUMG00000152433.1 20 20 1 ENSG00000116667.11 C1orf21 chr1 184387058 184629020 + protein_coding KNOWN OTTHUMG00000035386.4 241963 10971 18 ENSG00000227800.1 IGHD4-17 chr14 105894508 105894523 - IG_D_gene KNOWN OTTHUMG00000152437.1 16 16 1 ENSG00000211917.1 IGHD3-16 chr14 105895634 105895670 - IG_D_gene KNOWN OTTHUMG00000152439.1 37 37 1 ENSG00000211918.1 IGHD2-15 chr14 105897957 105897987 - IG_D_gene KNOWN OTTHUMG00000152430.1 31 31 1 ENSG00000227108.1 IGHD1-14 chr14 105900638 105900654 - IG_D_gene KNOWN OTTHUMG00000152369.1 17 17 1 ENSG00000211920.1 IGHD6-13 chr14 105901142 105901162 - IG_D_gene KNOWN OTTHUMG00000152370.1 21 21 1 ENSG00000211921.1 IGHD5-12 chr14 105902649 105902671 - IG_D_gene KNOWN OTTHUMG00000152367.1 23 23 1 ENSG00000232543.2 IGHD4-11 chr14 105903616 105903631 - IG_D_gene KNOWN OTTHUMG00000152368.1 16 16 1 ENSG00000211923.1 IGHD3-10 chr14 105904497 105904527 - IG_D_gene KNOWN OTTHUMG00000152354.3 31 31 1 ENSG00000211924.1 IGHD3-9 chr14 105904681 105904711 - IG_D_gene KNOWN OTTHUMG00000152352.2 31 31 1 ENSG00000211925.1 IGHD2-8 chr14 105907211 105907241 - IG_D_gene KNOWN OTTHUMG00000152361.1 31 31 1 ENSG00000230470.1 GS1-115G20.1 chr1 184408337 184412360 + sense_intronic NOVEL OTTHUMG00000035468.1 4024 423 2 ENSG00000237197.1 IGHD1-7 chr14 105909907 105909923 - IG_D_gene KNOWN OTTHUMG00000152357.1 17 17 1 ENSG00000228131.1 IGHD6-6 chr14 105910410 105910427 - IG_D_gene KNOWN OTTHUMG00000152353.1 18 18 1 ENSG00000211928.1 IGHD5-5 chr14 105912257 105912276 - IG_D_gene KNOWN OTTHUMG00000152360.1 20 20 1 ENSG00000233655.1 IGHD4-4 chr14 105913222 105913237 - IG_D_gene KNOWN OTTHUMG00000152355.1 16 16 1 ENSG00000211930.1 IGHD3-3 chr14 105914359 105914389 - IG_D_gene KNOWN OTTHUMG00000152358.1 31 31 1 ENSG00000211931.1 IGHD2-2 chr14 105916826 105916856 - IG_D_gene KNOWN OTTHUMG00000152356.1 31 31 1 ENSG00000226777.6 KIAA0125 chr14 105917979 105932642 + lincRNA KNOWN OTTHUMG00000152318.3 14664 9884 22 ENSG00000236170.1 IGHD1-1 chr14 105919502 105919518 - IG_D_gene KNOWN OTTHUMG00000152359.1 17 17 1 ENSG00000211933.2 IGHV6-1 chr14 105939756 105940253 - IG_V_gene KNOWN OTTHUMG00000152324.1 498 415 2 ENSG00000254279.1 IGHVII-1-1 chr14 105945210 105945389 - IG_V_pseudogene KNOWN OTTHUMG00000152325.1 180 180 1 ENSG00000232036.2 GS1-115G20.2 chr1 184566511 184567835 + processed_pseudogene KNOWN OTTHUMG00000035469.2 1325 1325 1 ENSG00000271968.2 ADAM6 chr14 105969729 105972269 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000152319.4 2541 2015 3 ENSG00000225200.2 AB019441.29 chr14 105978520 105979146 - processed_pseudogene KNOWN OTTHUMG00000152326.3 627 627 1 ENSG00000211934.3 IGHV1-2 chr14 105986582 105987083 - IG_V_gene KNOWN OTTHUMG00000152320.3 502 417 2 ENSG00000253780.1 IGHVIII-2-1 chr14 106001534 106001824 - IG_V_pseudogene KNOWN OTTHUMG00000152321.2 291 291 1 ENSG00000211935.3 IGHV1-3 chr14 106005095 106005574 - IG_V_gene KNOWN OTTHUMG00000152323.3 480 395 2 ENSG00000276775.1 IGHV4-4 chr14 106011922 106012420 - IG_V_gene KNOWN OTTHUMG00000152322.3 499 417 2 ENSG00000211937.3 IGHV2-5 chr14 106037902 106038365 - IG_V_gene KNOWN OTTHUMG00000152287.3 464 378 2 ENSG00000253387.1 IGHVIII-5-1 chr14 106039666 106039764 - IG_V_pseudogene KNOWN OTTHUMG00000152274.1 99 99 1 ENSG00000254053.1 IGHVIII-5-2 chr14 106045600 106045860 - IG_V_pseudogene KNOWN OTTHUMG00000152278.1 261 261 1 ENSG00000253763.1 IGHV3-6 chr14 106055549 106055998 - IG_V_pseudogene KNOWN OTTHUMG00000152283.2 450 347 2 ENSG00000227875.2 RP11-426M1.2 chr1 12080293 12080547 - processed_pseudogene KNOWN OTTHUMG00000001828.3 255 255 1 ENSG00000116406.17 EDEM3 chr1 184690231 184754913 - protein_coding KNOWN OTTHUMG00000035387.4 64683 7804 66 ENSG00000211938.2 IGHV3-7 chr14 106062151 106062683 - IG_V_gene KNOWN OTTHUMG00000152271.2 533 430 2 ENSG00000211941.3 IGHV3-11 chr14 106116635 106117204 - IG_V_gene KNOWN OTTHUMG00000152277.3 570 473 2 ENSG00000254215.1 IGHVIII-11-1 chr14 106120207 106120473 - IG_V_pseudogene KNOWN OTTHUMG00000152296.1 267 267 1 ENSG00000254174.1 IGHV1-12 chr14 106122420 106122709 - IG_V_pseudogene KNOWN OTTHUMG00000152281.1 290 205 2 ENSG00000211942.3 IGHV3-13 chr14 106129540 106130072 - IG_V_gene KNOWN OTTHUMG00000152295.3 533 430 2 ENSG00000253412.1 IGHVIII-13-1 chr14 106142287 106142577 - IG_V_pseudogene KNOWN OTTHUMG00000152272.2 291 291 1 ENSG00000253709.1 IGHV1-14 chr14 106145891 106146131 - IG_V_pseudogene KNOWN OTTHUMG00000152290.2 241 241 1 ENSG00000211943.2 IGHV3-15 chr14 106153624 106154163 - IG_V_gene KNOWN OTTHUMG00000152282.1 540 437 2 ENSG00000253458.1 IGHVII-15-1 chr14 106163583 106163802 - IG_V_pseudogene KNOWN OTTHUMG00000152275.1 220 220 1 ENSG00000211944.2 IGHV3-16 chr14 106165205 106165730 - IG_V_gene KNOWN OTTHUMG00000152273.1 526 425 2 ENSG00000135842.15 FAM129A chr1 184790724 184974550 - protein_coding KNOWN OTTHUMG00000035388.2 183827 8372 32 ENSG00000254046.1 IGHV1-17 chr14 106174342 106174760 - IG_V_pseudogene KNOWN OTTHUMG00000152288.1 419 334 2 ENSG00000273894.1 CH17-224D4.1 chr14 106179554 106180519 - processed_pseudogene KNOWN OTTHUMG00000188306.1 966 966 1 ENSG00000211945.2 IGHV1-18 chr14 106184901 106185394 - IG_V_gene KNOWN OTTHUMG00000152276.2 494 410 2 ENSG00000253883.1 IGHV3-19 chr14 106196700 106196990 - IG_V_pseudogene KNOWN OTTHUMG00000152280.1 291 291 1 ENSG00000271201.1 AB019440.50 chr14 106206603 106208571 + lincRNA NOVEL OTTHUMG00000185177.2 1969 389 2 ENSG00000211946.3 IGHV3-20 chr14 106210936 106211453 - IG_V_gene KNOWN OTTHUMG00000152285.3 518 415 2 ENSG00000211947.2 IGHV3-21 chr14 106235064 106235594 - IG_V_gene KNOWN OTTHUMG00000152279.1 531 430 2 ENSG00000253957.1 IGHV3-22 chr14 106257762 106258223 - IG_V_pseudogene KNOWN OTTHUMG00000152293.1 462 359 2 ENSG00000253345.1 IGHVII-22-1 chr14 106263362 106263626 - IG_V_pseudogene KNOWN OTTHUMG00000152102.1 265 265 1 ENSG00000254045.1 IGHVIII-22-2 chr14 106264688 106264715 - IG_V_pseudogene KNOWN OTTHUMG00000152060.1 28 28 1 ENSG00000252222.1 RNU7-13P chr1 184821428 184821489 - snRNA KNOWN NA 62 62 1 ENSG00000211949.3 IGHV3-23 chr14 106268606 106269140 - IG_V_gene KNOWN OTTHUMG00000152091.3 535 432 2 ENSG00000211950.2 IGHV1-24 chr14 106276548 106277043 - IG_V_gene KNOWN OTTHUMG00000152095.1 496 411 2 ENSG00000238275.2 HOMER2P2 chr14 106286811 106287657 - processed_pseudogene KNOWN OTTHUMG00000152092.2 847 847 1 ENSG00000276210.2 LINC00226 chr14 106287674 106288828 + lincRNA NOVEL OTTHUMG00000152078.5 1155 1078 4 ENSG00000253441.1 IGHV3-25 chr14 106289029 106289479 - IG_V_pseudogene KNOWN OTTHUMG00000152073.2 451 351 2 ENSG00000253367.1 IGHVIII-25-1 chr14 106293568 106293808 - IG_V_pseudogene KNOWN OTTHUMG00000152072.2 241 241 1 ENSG00000211951.2 IGHV2-26 chr14 106301396 106301862 - IG_V_gene KNOWN OTTHUMG00000152100.1 467 381 2 ENSG00000253462.1 IGHVIII-26-1 chr14 106309417 106309666 - IG_V_pseudogene KNOWN OTTHUMG00000152059.2 250 250 1 ENSG00000253482.1 IGHVII-26-2 chr14 106314651 106314975 - IG_V_pseudogene KNOWN OTTHUMG00000152066.1 325 325 1 ENSG00000254326.1 IGHV7-27 chr14 106317823 106318236 - IG_V_pseudogene KNOWN OTTHUMG00000152070.1 414 330 2 ENSG00000260976.1 GS1-120K12.4 chr1 185001527 185008683 + lincRNA NOVEL OTTHUMG00000176171.1 7157 1091 2 ENSG00000211952.3 IGHV4-28 chr14 106324254 106324760 - IG_V_gene KNOWN OTTHUMG00000152062.3 507 425 2 ENSG00000270474.1 CH17-60O17.1 chr14 106331116 106331552 - IG_V_pseudogene KNOWN OTTHUMG00000188328.1 437 334 2 ENSG00000270550.1 IGHV3-30 chr14 106335082 106335613 - IG_V_gene KNOWN OTTHUMG00000188332.1 532 431 2 ENSG00000253491.1 IGHVII-30-1 chr14 106342724 106342955 - IG_V_pseudogene KNOWN OTTHUMG00000152099.2 232 232 1 ENSG00000253587.1 IGHV3-30-2 chr14 106344395 106344833 - IG_V_pseudogene KNOWN OTTHUMG00000152082.1 439 345 2 ENSG00000231475.3 IGHV4-31 chr14 106349283 106349792 - IG_V_gene KNOWN OTTHUMG00000152097.3 510 428 2 ENSG00000253149.1 IGHVII-31-1 chr14 106354672 106354708 - IG_V_pseudogene KNOWN OTTHUMG00000152101.1 37 37 1 ENSG00000254289.1 IGHV3-32 chr14 106356165 106356591 - IG_V_pseudogene KNOWN OTTHUMG00000152063.1 427 326 2 ENSG00000211955.2 IGHV3-33 chr14 106359793 106360324 - IG_V_gene KNOWN OTTHUMG00000152077.1 532 431 2 ENSG00000254203.1 IGHVII-33-1 chr14 106367385 106367664 - IG_V_pseudogene KNOWN OTTHUMG00000152086.1 280 280 1 ENSG00000201312.1 RNA5SP72 chr1 185014951 185015067 - rRNA KNOWN NA 117 117 1 ENSG00000253440.1 IGHV3-33-2 chr14 106369107 106369546 - IG_V_pseudogene KNOWN OTTHUMG00000152096.1 440 346 2 ENSG00000211956.2 IGHV4-34 chr14 106373663 106374145 - IG_V_gene KNOWN OTTHUMG00000152074.1 483 400 2 ENSG00000253325.1 IGHV7-34-1 chr14 106377300 106377733 - IG_V_pseudogene KNOWN OTTHUMG00000152085.1 434 350 2 ENSG00000211957.2 IGHV3-35 chr14 106389392 106389858 - IG_V_gene KNOWN OTTHUMG00000152079.1 467 366 2 ENSG00000253240.1 IGHV3-36 chr14 106392774 106393231 - IG_V_pseudogene KNOWN OTTHUMG00000152068.1 458 401 2 ENSG00000253359.1 IGHV3-37 chr14 106396676 106397114 - IG_V_pseudogene KNOWN OTTHUMG00000152083.1 439 340 2 ENSG00000211958.2 IGHV3-38 chr14 106410493 106411021 - IG_V_gene KNOWN OTTHUMG00000152093.1 529 426 2 ENSG00000253989.1 IGHVIII-38-1 chr14 106418025 106418078 - IG_V_pseudogene KNOWN OTTHUMG00000152090.1 54 54 1 ENSG00000211959.2 IGHV4-39 chr14 106421711 106422218 - IG_V_gene KNOWN OTTHUMG00000152067.1 508 425 2 ENSG00000253467.1 IGHV7-40 chr14 106425365 106425563 - IG_V_pseudogene KNOWN OTTHUMG00000152088.2 199 199 1 ENSG00000121481.9 RNF2 chr1 185045364 185102608 + protein_coding KNOWN OTTHUMG00000035391.2 57245 4073 21 ENSG00000228757.1 AB019438.66 chr14 106436415 106436555 - unprocessed_pseudogene KNOWN OTTHUMG00000152076.2 141 141 1 ENSG00000253294.1 IGHVII-40-1 chr14 106440950 106441007 - IG_V_pseudogene KNOWN OTTHUMG00000152098.1 58 58 1 ENSG00000278473.1 IGHV3-41 chr14 106443133 106443583 - IG_V_pseudogene KNOWN OTTHUMG00000152089.2 451 348 2 ENSG00000228966.2 HOMER2P1 chr14 106460092 106461055 - processed_pseudogene KNOWN OTTHUMG00000152103.3 964 964 1 ENSG00000254228.1 IGHV3-42 chr14 106463258 106463558 - IG_V_pseudogene KNOWN OTTHUMG00000152081.1 301 301 1 ENSG00000232216.1 IGHV3-43 chr14 106470264 106470800 - IG_V_gene KNOWN OTTHUMG00000152094.1 537 434 2 ENSG00000253588.1 IGHVIII-44 chr14 106478220 106478393 - IG_V_pseudogene KNOWN OTTHUMG00000152065.1 174 93 2 ENSG00000270816.4 LINC00221 chr14 106482439 106521073 + lincRNA NOVEL OTTHUMG00000152084.2 38635 3086 10 ENSG00000253465.1 IGHVIV-44-1 chr14 106489345 106489756 - IG_V_pseudogene KNOWN OTTHUMG00000152064.2 412 338 2 ENSG00000253895.1 IGHVII-44-2 chr14 106494134 106494383 - IG_V_pseudogene KNOWN OTTHUMG00000152080.1 250 250 1 ENSG00000232792.2 FTH1P25 chr1 185071567 185072035 - processed_pseudogene KNOWN OTTHUMG00000035392.2 469 469 1 ENSG00000211961.3 IGHV1-45 chr14 106506996 106507491 - IG_V_gene KNOWN OTTHUMG00000152075.3 496 411 2 ENSG00000211962.2 IGHV1-46 chr14 106511117 106511856 - IG_V_gene KNOWN OTTHUMG00000151963.1 740 655 2 ENSG00000253808.1 IGHVII-46-1 chr14 106515818 106515854 - IG_V_pseudogene KNOWN OTTHUMG00000151952.1 37 37 1 ENSG00000229092.2 IGHV3-47 chr14 106518582 106519027 - IG_V_pseudogene KNOWN OTTHUMG00000151968.2 446 335 2 ENSG00000253862.1 IGHVIII-47-1 chr14 106531141 106531471 - IG_V_pseudogene KNOWN OTTHUMG00000151949.1 331 331 1 ENSG00000211964.3 IGHV3-48 chr14 106537810 106538344 - IG_V_gene KNOWN OTTHUMG00000151959.3 535 432 2 ENSG00000211965.3 IGHV3-49 chr14 106556920 106675432 - IG_V_gene KNOWN OTTHUMG00000151967.3 118513 468 4 ENSG00000253386.1 IGHVII-49-1 chr14 106564375 106564598 - IG_V_pseudogene KNOWN OTTHUMG00000151974.1 224 224 1 ENSG00000253241.1 IGHV3-50 chr14 106566117 106566555 - IG_V_pseudogene KNOWN OTTHUMG00000151964.1 439 317 2 ENSG00000211966.2 IGHV5-51 chr14 106578744 106579236 - IG_V_gene KNOWN OTTHUMG00000151960.1 493 410 2 ENSG00000121486.10 TRMT1L chr1 185118098 185157072 - protein_coding KNOWN OTTHUMG00000035389.2 38975 4945 27 ENSG00000254167.1 IGHVIII-51-1 chr14 106583506 106583807 - IG_V_pseudogene KNOWN OTTHUMG00000151957.2 302 302 1 ENSG00000253941.1 IGHVII-51-2 chr14 106584718 106584976 - IG_V_pseudogene KNOWN OTTHUMG00000151969.1 259 259 1 ENSG00000253545.1 IGHV3-52 chr14 106586376 106586826 - IG_V_pseudogene KNOWN OTTHUMG00000151958.1 451 353 2 ENSG00000211967.3 IGHV3-53 chr14 106592676 106593347 - IG_V_gene KNOWN OTTHUMG00000151966.3 672 571 2 ENSG00000253714.1 IGHVII-53-1 chr14 106599670 106599924 - IG_V_pseudogene KNOWN OTTHUMG00000151954.2 255 255 1 ENSG00000275475.1 IGHV3-54 chr14 106601346 106601792 - IG_V_pseudogene KNOWN OTTHUMG00000151962.3 447 353 2 ENSG00000254395.1 IGHV4-55 chr14 106606101 106606551 - IG_V_pseudogene KNOWN OTTHUMG00000151955.1 451 368 2 ENSG00000253131.1 IGHV7-56 chr14 106609762 106610196 - IG_V_pseudogene KNOWN OTTHUMG00000151975.1 435 351 2 ENSG00000253759.1 IGHV3-57 chr14 106618894 106619173 - IG_V_pseudogene KNOWN OTTHUMG00000151961.1 280 280 1 ENSG00000211968.3 IGHV1-58 chr14 106622357 106622855 - IG_V_gene KNOWN OTTHUMG00000151953.3 499 414 2 ENSG00000116668.11 SWT1 chr1 185157080 185291765 + protein_coding KNOWN OTTHUMG00000035390.1 134686 4054 43 ENSG00000224373.3 IGHV4-59 chr14 106627249 106627825 - IG_V_gene KNOWN OTTHUMG00000151973.2 577 495 2 ENSG00000253742.1 IGHV3-60 chr14 106631197 106631653 - IG_V_pseudogene KNOWN OTTHUMG00000151956.2 457 354 2 ENSG00000199480.1 RNA5SP389 chr14 106636672 106636786 + rRNA KNOWN NA 115 115 1 ENSG00000280494.1 AC245369.3 chr14 106636704 106636763 + miRNA NOVEL NA 60 60 1 ENSG00000254329.1 IGHVII-60-1 chr14 106637718 106637973 - IG_V_pseudogene KNOWN OTTHUMG00000151951.1 256 256 1 ENSG00000211970.3 IGHV4-61 chr14 106639119 106639657 - IG_V_gene KNOWN OTTHUMG00000151976.3 539 457 2 ENSG00000223648.3 IGHV3-64 chr14 106643132 106658258 - IG_V_gene KNOWN OTTHUMG00000151971.1 15127 530 4 ENSG00000253132.1 IGHV3-62 chr14 106643142 106643585 - IG_V_pseudogene KNOWN OTTHUMG00000151950.2 444 340 2 ENSG00000253747.1 IGHVII-62-1 chr14 106650551 106650785 - IG_V_pseudogene KNOWN OTTHUMG00000151965.2 235 235 1 ENSG00000253936.1 IGHV3-63 chr14 106652237 106652681 - IG_V_pseudogene KNOWN OTTHUMG00000151977.2 445 341 2 ENSG00000231084.2 CTA-253N17.1 chr1 185171335 185171710 - processed_pseudogene KNOWN OTTHUMG00000057655.2 376 376 1 ENSG00000253209.1 IGHV3-65 chr14 106666092 106666532 - IG_V_pseudogene KNOWN OTTHUMG00000151972.2 441 341 2 ENSG00000253169.1 IGHVII-65-1 chr14 106671797 106672044 - IG_V_pseudogene KNOWN OTTHUMG00000151970.1 248 248 1 ENSG00000211972.2 IGHV3-66 chr14 106675017 106675544 - IG_V_gene KNOWN OTTHUMG00000151880.1 528 427 2 ENSG00000253274.1 IGHV1-67 chr14 106680603 106681042 - IG_V_pseudogene KNOWN OTTHUMG00000151868.1 440 357 2 ENSG00000223506.2 SLC20A1P1 chr14 106683395 106684350 - processed_pseudogene KNOWN OTTHUMG00000151877.2 956 956 1 ENSG00000253820.1 IGHVII-67-1 chr14 106686517 106686562 - IG_V_pseudogene KNOWN OTTHUMG00000151864.1 46 46 1 ENSG00000254036.1 IGHVIII-67-2 chr14 106687113 106687200 - IG_V_pseudogene KNOWN OTTHUMG00000151861.1 88 88 1 ENSG00000253635.1 IGHVIII-67-3 chr14 106692657 106692888 - IG_V_pseudogene KNOWN OTTHUMG00000151879.1 232 232 1 ENSG00000254052.1 IGHVIII-67-4 chr14 106695102 106695397 - IG_V_pseudogene KNOWN OTTHUMG00000151874.1 296 296 1 ENSG00000253703.1 IGHV1-68 chr14 106703852 106704146 - IG_V_pseudogene KNOWN OTTHUMG00000151876.1 295 295 1 ENSG00000275459.1 MIR7846 chr1 12166943 12167038 + miRNA KNOWN NA 96 96 1 ENSG00000213051.3 RPL5P5 chr1 185226808 185227700 - processed_pseudogene KNOWN OTTHUMG00000035382.2 893 893 1 ENSG00000211973.2 IGHV1-69 chr14 106714684 106715181 - IG_V_gene KNOWN OTTHUMG00000151862.1 498 412 2 ENSG00000211974.3 IGHV2-70 chr14 106723574 106724093 - IG_V_gene KNOWN OTTHUMG00000151870.3 520 434 2 ENSG00000280411.1 IGHV1-69-2 chr14 106762092 106762588 - IG_V_gene KNOWN OTTHUMG00000189341.1 497 411 2 ENSG00000274576.2 IGHV2-70 chr14 106770577 106771020 - IG_V_gene KNOWN OTTHUMG00000189342.1 444 358 2 ENSG00000254056.1 IGHV3-71 chr14 106775157 106775618 - IG_V_pseudogene KNOWN OTTHUMG00000151881.1 462 359 2 ENSG00000225698.3 IGHV3-72 chr14 106790691 106791233 - IG_V_gene KNOWN OTTHUMG00000151865.1 543 440 3 ENSG00000211976.2 IGHV3-73 chr14 106802694 106803233 - IG_V_gene KNOWN OTTHUMG00000151867.1 540 437 2 ENSG00000224650.2 IGHV3-74 chr14 106810442 106811131 - IG_V_gene KNOWN OTTHUMG00000151860.1 690 587 2 ENSG00000254134.1 IGHVII-74-1 chr14 106821174 106821414 - IG_V_pseudogene KNOWN OTTHUMG00000151875.1 241 241 1 ENSG00000254176.1 IGHV3-75 chr14 106823687 106824147 - IG_V_pseudogene KNOWN OTTHUMG00000151866.1 461 358 2 ENSG00000201421.1 Y_RNA chr1 185251313 185251411 + misc_RNA NOVEL NA 99 99 1 ENSG00000253247.1 IGHV3-76 chr14 106827869 106828163 - IG_V_pseudogene KNOWN OTTHUMG00000151878.1 295 295 1 ENSG00000253310.1 IGHVIII-76-1 chr14 106831767 106832052 - IG_V_pseudogene KNOWN OTTHUMG00000151872.1 286 286 1 ENSG00000265929.1 MIR5195 chr14 106850885 106850999 - miRNA KNOWN NA 115 115 1 ENSG00000211978.2 IGHV5-78 chr14 106851123 106851417 - IG_V_pseudogene KNOWN OTTHUMG00000151873.1 295 295 1 ENSG00000253674.1 IGHVII-78-1 chr14 106865627 106865895 - IG_V_pseudogene KNOWN OTTHUMG00000151863.2 269 269 1 ENSG00000275747.1 IGHV3-79 chr14 106867660 106868092 - IG_V_pseudogene KNOWN OTTHUMG00000151871.2 433 341 2 ENSG00000211979.2 IGHV7-81 chr14 106874583 106875071 - IG_V_gene KNOWN OTTHUMG00000151731.2 489 405 2 ENSG00000253303.1 IGHVIII-82 chr14 106879563 106879812 - IG_V_pseudogene KNOWN OTTHUMG00000151732.1 250 250 1 ENSG00000215567.5 RP11-79C23.1 chr15 19878555 19887814 + unprocessed_pseudogene KNOWN OTTHUMG00000163698.1 9260 714 6 ENSG00000201241.1 RNU6-978P chr15 19883614 19883716 + snRNA KNOWN NA 103 103 1 ENSG00000206640.1 Y_RNA chr1 185257911 185258015 - misc_RNA NOVEL NA 105 105 1 ENSG00000258463.1 RP11-173D3.3 chr15 19899334 19899559 + processed_pseudogene KNOWN OTTHUMG00000171715.1 226 226 1 ENSG00000274347.1 RP11-1360M22.10 chr15 19955300 19955602 - unprocessed_pseudogene KNOWN OTTHUMG00000187843.1 303 303 1 ENSG00000188403.7 IGHV1OR15-9 chr15 19964666 19965101 - IG_V_gene KNOWN OTTHUMG00000171652.4 436 353 2 ENSG00000258706.1 SLC20A1P3 chr15 19967414 19968352 - processed_pseudogene KNOWN OTTHUMG00000171653.1 939 939 1 ENSG00000259337.4 IGHV1OR15-2 chr15 19972782 19973218 - IG_V_pseudogene KNOWN OTTHUMG00000176334.3 437 353 2 ENSG00000259490.2 IGHV3OR15-7 chr15 19987656 19988117 - IG_V_gene KNOWN OTTHUMG00000171835.2 462 359 2 ENSG00000270961.1 IGHD5OR15-5A chr15 20003840 20003862 - IG_D_gene KNOWN OTTHUMG00000184622.1 23 23 1 ENSG00000271317.1 IGHD4OR15-4A chr15 20004797 20004815 - IG_D_gene KNOWN OTTHUMG00000184621.1 19 19 1 ENSG00000270783.1 IGHD3OR15-3A chr15 20005905 20005935 - IG_D_gene KNOWN OTTHUMG00000184598.1 31 31 1 ENSG00000271197.1 IGHD2OR15-2A chr15 20008402 20008432 - IG_D_gene KNOWN OTTHUMG00000184594.1 31 31 1 ENSG00000233583.1 RP4-635A23.3 chr1 185262286 185264356 - processed_pseudogene KNOWN OTTHUMG00000035383.1 2071 1152 3 ENSG00000271336.1 IGHD1OR15-1A chr15 20011153 20011169 - IG_D_gene KNOWN OTTHUMG00000184580.1 17 17 1 ENSG00000277988.1 RP11-1360M22.11 chr15 20012741 20014208 + unprocessed_pseudogene KNOWN OTTHUMG00000187844.1 1468 397 3 ENSG00000259769.1 RP11-1360M22.2 chr15 20046296 20047994 - processed_pseudogene KNOWN OTTHUMG00000171975.1 1699 1699 1 ENSG00000258397.1 BCAR1P1 chr15 20073699 20074334 - processed_pseudogene KNOWN OTTHUMG00000171656.1 636 636 1 ENSG00000239471.3 RN7SL584P chr15 20095733 20096029 - misc_RNA KNOWN NA 297 297 1 ENSG00000258410.1 RP11-173D3.1 chr15 20128745 20147953 - lincRNA NOVEL OTTHUMG00000171657.1 19209 572 4 ENSG00000278935.1 RP11-173D3.4 chr15 20141794 20146430 + TEC KNOWN OTTHUMG00000175828.1 4637 4637 1 ENSG00000258780.1 BMS1P15 chr15 20153776 20160826 + unprocessed_pseudogene KNOWN OTTHUMG00000171658.1 7051 1141 9 ENSG00000258628.1 RP11-492D6.3 chr15 20228620 20277503 - unprocessed_pseudogene KNOWN OTTHUMG00000171659.1 48884 2512 13 ENSG00000259156.6 CHEK2P2 chr15 20282744 20291586 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000171660.4 8843 945 17 ENSG00000252612.1 Y_RNA chr1 185266535 185266627 + misc_RNA NOVEL NA 93 93 1 ENSG00000258654.1 RP11-509A17.3 chr15 20344736 20359166 + lincRNA NOVEL OTTHUMG00000171661.1 14431 1577 6 ENSG00000265002.1 AC026495.1 chr15 20358108 20358181 + miRNA NOVEL NA 74 74 1 ENSG00000180229.11 HERC2P3 chr15 20379495 20506180 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000157175.3 126686 9413 156 ENSG00000258488.2 RP11-467L19.8 chr15 20516252 20520627 + unprocessed_pseudogene KNOWN OTTHUMG00000171662.3 4376 735 4 ENSG00000277322.1 GOLGA6L6 chr15 20531856 20541800 - protein_coding KNOWN OTTHUMG00000171663.5 9945 4013 9 ENSG00000258797.2 RP11-467L19.6 chr15 20545576 20549444 - unprocessed_pseudogene KNOWN OTTHUMG00000171664.3 3869 670 4 ENSG00000181984.11 GOLGA8CP chr15 20562375 20575696 + unprocessed_pseudogene KNOWN OTTHUMG00000171665.4 13322 5237 18 ENSG00000278497.1 Metazoa_SRP chr15 20570886 20571175 + misc_RNA NOVEL NA 290 290 1 ENSG00000221354.1 AC023310.1 chr15 20572047 20572129 + miRNA NOVEL NA 83 83 1 ENSG00000258916.2 SPATA31E2P chr15 20593494 20599195 - unprocessed_pseudogene KNOWN OTTHUMG00000171666.3 5702 4965 3 ENSG00000238061.2 RP4-635A23.4 chr1 185280844 185281816 + processed_pseudogene KNOWN OTTHUMG00000035385.2 973 973 1 ENSG00000258707.2 RP11-467L19.11 chr15 20626819 20627365 - processed_pseudogene KNOWN OTTHUMG00000171716.2 547 547 1 ENSG00000270685.1 IGHV1OR15-6 chr15 20639464 20639890 - IG_V_pseudogene KNOWN OTTHUMG00000184707.2 427 343 2 ENSG00000278626.1 RP11-467L19.16 chr15 20642799 20643448 - lincRNA NOVEL OTTHUMG00000186723.2 650 650 1 ENSG00000258590.4 NBEAP1 chr15 20657638 20688408 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000171717.1 30771 3689 12 ENSG00000279628.1 RP11-467L19.14 chr15 20658900 20664970 + TEC KNOWN OTTHUMG00000175834.1 6071 6071 2 ENSG00000260409.1 RP11-403B2.7 chr15 20729747 20756183 - lincRNA NOVEL OTTHUMG00000172815.1 26437 1602 2 ENSG00000238478.1 RNU6-498P chr15 20738679 20738785 + snRNA KNOWN NA 107 107 1 ENSG00000273699.1 AC012414.1 chr15 20755375 20755460 - miRNA NOVEL NA 86 86 1 ENSG00000281535.1 RP11-116P24.2 chr15 20759307 20774794 - lincRNA NOVEL OTTHUMG00000190192.1 15488 752 2 ENSG00000259383.1 RP11-403B2.6 chr15 20759311 20774794 - lincRNA NOVEL OTTHUMG00000171841.1 15484 748 2 ENSG00000279838.1 RP4-635A23.6 chr1 185292384 185294372 - TEC KNOWN OTTHUMG00000176174.1 1989 1989 1 ENSG00000259443.1 RP11-403B2.5 chr15 20773084 20774871 + lincRNA NOVEL OTTHUMG00000171842.1 1788 1074 2 ENSG00000258420.1 RP11-403B2.3 chr15 20775464 20775998 - processed_pseudogene KNOWN OTTHUMG00000171704.1 535 535 1 ENSG00000274499.1 RP11-403B2.10 chr15 20803505 20826173 - transcribed_processed_pseudogene KNOWN OTTHUMG00000187846.1 22669 1507 4 ENSG00000259089.2 GRAMD4P5 chr15 20813299 20814958 + unprocessed_pseudogene KNOWN OTTHUMG00000171805.2 1660 761 3 ENSG00000259214.1 RP11-810K23.7 chr15 20826454 20826640 - processed_pseudogene KNOWN OTTHUMG00000171843.1 187 187 1 ENSG00000265322.1 MIR3118-4 chr15 20832795 20832869 + miRNA KNOWN NA 75 75 1 ENSG00000230031.9 POTEB2 chr15 20835372 20866314 - protein_coding NOVEL OTTHUMG00000185829.1 30943 1687 20 ENSG00000238489.1 RNU6-749P chr15 20855251 20855357 - snRNA KNOWN NA 107 107 1 ENSG00000261048.1 RP11-810K23.9 chr15 20890206 20890606 - processed_pseudogene KNOWN OTTHUMG00000172632.1 401 401 1 ENSG00000261554.1 RP11-810K23.10 chr15 20893383 20893980 - processed_pseudogene KNOWN OTTHUMG00000172633.1 598 598 1 ENSG00000116679.14 IVNS1ABP chr1 185296388 185317329 - protein_coding KNOWN OTTHUMG00000035384.1 20942 7929 62 ENSG00000258799.1 ZNF519P2 chr15 20901441 20901609 - processed_pseudogene KNOWN OTTHUMG00000171707.1 169 169 1 ENSG00000270831.1 NF1P1 chr15 20916686 20935658 - unprocessed_pseudogene KNOWN OTTHUMG00000184188.2 18973 2645 17 ENSG00000266545.1 MIR5701-1 chr15 20940252 20940333 + miRNA KNOWN NA 82 82 1 ENSG00000258710.6 LINC01193 chr15 20940438 20993303 + lincRNA NOVEL OTTHUMG00000171709.3 52866 4054 17 ENSG00000258855.1 OR11J2P chr15 20960675 20961581 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000171710.1 907 907 1 ENSG00000258494.1 OR11J5P chr15 20969282 20970215 - processed_pseudogene KNOWN OTTHUMG00000171711.1 934 934 1 ENSG00000270824.1 IGHD5OR15-5B chr15 21010494 21010516 - IG_D_gene KNOWN OTTHUMG00000184624.1 23 23 1 ENSG00000270451.1 IGHD4OR15-4B chr15 21011451 21011469 - IG_D_gene KNOWN OTTHUMG00000184611.1 19 19 1 ENSG00000271255.1 IGHD3OR15-3B chr15 21012559 21012589 - IG_D_gene KNOWN OTTHUMG00000184596.2 31 31 1 ENSG00000271305.1 IGHD2OR15-2B chr15 21015048 21015078 - IG_D_gene KNOWN OTTHUMG00000184595.1 31 31 1 ENSG00000273004.1 GS1-279B7.2 chr1 185317779 185318530 + lincRNA NOVEL OTTHUMG00000186480.1 752 752 1 ENSG00000270185.1 IGHD1OR15-1B chr15 21017800 21017816 - IG_D_gene KNOWN OTTHUMG00000184585.1 17 17 1 ENSG00000259698.1 KIAA0125P2 chr15 21019388 21020851 + unprocessed_pseudogene KNOWN OTTHUMG00000172241.1 1464 410 3 ENSG00000259025.1 RP11-810K23.6 chr15 21053004 21054702 - processed_pseudogene KNOWN OTTHUMG00000171712.1 1699 1699 1 ENSG00000258771.1 BCAR1P2 chr15 21080812 21081447 - processed_pseudogene KNOWN OTTHUMG00000171713.1 636 636 1 ENSG00000243059.3 RN7SL400P chr15 21102843 21103138 - misc_RNA KNOWN NA 296 296 1 ENSG00000260986.1 RP11-854K16.3 chr15 21127698 21130095 - lincRNA NOVEL OTTHUMG00000176131.1 2398 510 2 ENSG00000279595.1 RP11-854K16.4 chr15 21148334 21152970 + TEC KNOWN OTTHUMG00000186724.1 4637 4637 1 ENSG00000258684.2 BMS1P16 chr15 21160305 21167357 + unprocessed_pseudogene KNOWN OTTHUMG00000171714.2 7053 1147 8 ENSG00000258883.1 RP11-32B5.2 chr15 21250180 21260147 - unprocessed_pseudogene KNOWN OTTHUMG00000171725.1 9968 382 3 ENSG00000237161.4 RP11-32B5.1 chr15 21293653 21295201 - processed_pseudogene KNOWN OTTHUMG00000171726.2 1549 1549 1 ENSG00000261024.5 GS1-279B7.1 chr1 185321157 185335039 - lincRNA NOVEL OTTHUMG00000035393.2 13883 1088 12 ENSG00000247765.2 RP11-32B5.7 chr15 21298233 21325241 - lincRNA NOVEL OTTHUMG00000176136.2 27009 2165 2 ENSG00000207289.1 RNU6-1235P chr15 21307749 21307855 + snRNA KNOWN NA 107 107 1 ENSG00000276038.1 AC068446.1 chr15 21324433 21324518 - miRNA NOVEL NA 86 86 1 ENSG00000280881.1 RP11-275E15.2 chr15 21328380 21343881 - lincRNA NOVEL OTTHUMG00000190193.1 15502 752 2 ENSG00000280703.1 RP11-275E15.3 chr15 21342171 21343958 + lincRNA NOVEL OTTHUMG00000190194.1 1788 1074 2 ENSG00000258415.2 RP11-32B5.4 chr15 21344548 21345085 - processed_pseudogene KNOWN OTTHUMG00000171727.2 538 538 1 ENSG00000268531.3 RP11-32B5.8 chr15 21368459 21370621 + lincRNA NOVEL OTTHUMG00000187342.2 2163 2163 1 ENSG00000258712.2 CXADRP2 chr15 21372793 21373881 - processed_pseudogene KNOWN OTTHUMG00000171728.2 1089 1089 1 ENSG00000258767.1 RP11-32B5.5 chr15 21382383 21382842 + processed_pseudogene KNOWN OTTHUMG00000171732.1 460 460 1 ENSG00000258848.1 GRAMD4P6 chr15 21383821 21384064 + processed_pseudogene KNOWN OTTHUMG00000171733.1 244 244 1 ENSG00000028137.15 TNFRSF1B chr1 12167003 12209228 + protein_coding KNOWN OTTHUMG00000001829.1 42226 3766 27 ENSG00000252407.1 RNU7-183P chr1 185434244 185434305 + snRNA KNOWN NA 62 62 1 ENSG00000277243.1 MIR3118-3 chr15 21406385 21406459 + miRNA KNOWN NA 75 75 1 ENSG00000278522.3 POTEB3 chr15 21408243 21440451 - protein_coding KNOWN OTTHUMG00000189222.2 32209 3418 29 ENSG00000275174.1 U6 chr15 21428879 21428985 - snRNA NOVEL NA 107 107 1 ENSG00000281347.1 NF1P2 chr15 21490364 21509404 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000190195.1 19041 2500 20 ENSG00000277841.1 MIR5701-2 chr15 21513959 21514040 + miRNA KNOWN NA 82 82 1 ENSG00000280724.1 RP11-11H9.2 chr15 21514144 21567053 + lincRNA NOVEL OTTHUMG00000190196.1 52910 3398 5 ENSG00000280709.1 RP11-983G14.1 chr15 21552795 21653276 + lincRNA NOVEL OTTHUMG00000190197.1 100482 3050 18 ENSG00000279639.1 AC135068.1 chr15 21574225 21575207 - pseudogene NOVEL NA 983 978 3 ENSG00000182974.3 OR4M2 chr15 21637909 21638992 + protein_coding NOVEL OTTHUMG00000189317.1 1084 1084 1 ENSG00000279408.2 RP11-294C11.3 chr15 21651844 21653039 + protein_coding NOVEL OTTHUMG00000190198.1 1196 1196 3 ENSG00000270920.1 FAM195DP chr1 185435839 185436047 + processed_pseudogene KNOWN OTTHUMG00000184457.1 209 209 1 ENSG00000279445.2 OR4N3P chr15 21683038 21683962 + unprocessed_pseudogene KNOWN OTTHUMG00000190199.1 925 925 1 ENSG00000281113.1 RP11-294C11.6 chr15 21703428 21705627 - lincRNA NOVEL OTTHUMG00000190380.1 2200 568 2 ENSG00000281087.1 RP11-983G14.3 chr15 21709649 21710270 - processed_pseudogene KNOWN OTTHUMG00000190200.1 622 622 1 ENSG00000281179.1 RP11-294C11.4 chr15 21717808 21718245 - IG_V_gene KNOWN OTTHUMG00000190381.1 438 353 2 ENSG00000281550.1 RP11-294C11.5 chr15 21735506 21735945 - IG_V_gene KNOWN OTTHUMG00000190382.1 440 355 2 ENSG00000278263.2 RP11-294C11.2 chr15 21742364 21742799 - IG_V_gene NOVEL OTTHUMG00000189323.2 436 353 2 ENSG00000280655.1 RP11-361C13.1 chr15 21752278 21752710 - IG_V_gene KNOWN OTTHUMG00000190383.1 433 348 2 ENSG00000265793.1 MIR3118-2 chr15 21843750 21843824 + miRNA KNOWN NA 75 75 1 ENSG00000233917.7 POTEB chr15 21846329 21877703 - protein_coding KNOWN OTTHUMG00000171734.2 31375 2281 32 ENSG00000200790.1 RNU6-631P chr15 21866210 21866316 - snRNA KNOWN NA 107 107 1 ENSG00000279401.1 GS1-204I12.3 chr1 185518651 185520986 + TEC KNOWN OTTHUMG00000176175.1 2336 2336 1 ENSG00000258585.2 ZNF519P3 chr15 21911559 21912590 - processed_pseudogene KNOWN OTTHUMG00000171729.2 1032 1032 1 ENSG00000258997.1 NF1P2 chr15 21927657 21946641 - unprocessed_pseudogene KNOWN OTTHUMG00000171730.1 18985 2505 16 ENSG00000264902.1 MIR5701-3 chr15 21951242 21951323 + miRNA KNOWN NA 82 82 1 ENSG00000258786.1 RP11-928F19.3 chr15 21980321 21981209 - processed_pseudogene KNOWN OTTHUMG00000171731.1 889 889 1 ENSG00000259176.4 RP11-69H14.6 chr15 21990061 22125546 + sense_overlapping NOVEL OTTHUMG00000172277.2 135486 4905 68 ENSG00000258721.2 OR11H3P chr15 22009548 22010529 - processed_pseudogene KNOWN OTTHUMG00000171736.2 982 982 1 ENSG00000259324.1 OR11K1P chr15 22030931 22031834 - processed_pseudogene KNOWN OTTHUMG00000171933.1 904 904 1 ENSG00000258652.2 OR4Q1P chr15 22044864 22045399 + processed_pseudogene KNOWN OTTHUMG00000171737.2 536 536 1 ENSG00000261277.2 OR4H6P chr15 22056709 22057949 + transcribed_processed_pseudogene KNOWN OTTHUMG00000172787.2 1241 1241 2 ENSG00000274102.1 OR4M2 chr15 22080527 22081659 + protein_coding KNOWN OTTHUMG00000171738.1 1133 1133 1 ENSG00000228309.5 LINC01350 chr1 185558372 185628527 - lincRNA NOVEL OTTHUMG00000035577.2 70156 1265 15 ENSG00000183706.4 OR4N4 chr15 22094431 22095556 + protein_coding KNOWN OTTHUMG00000171739.1 1126 1126 1 ENSG00000259435.2 OR4N3P chr15 22125618 22126435 + processed_pseudogene KNOWN OTTHUMG00000172278.2 818 818 1 ENSG00000260739.1 RP11-2F9.4 chr15 22145939 22148226 - lincRNA NOVEL OTTHUMG00000172788.1 2288 545 2 ENSG00000223877.4 RP11-2F9.3 chr15 22152276 22152897 - processed_pseudogene KNOWN OTTHUMG00000172789.1 622 622 1 ENSG00000270505.1 IGHV1OR15-1 chr15 22160431 22160868 - IG_V_gene KNOWN OTTHUMG00000184670.1 438 353 2 ENSG00000271288.1 IGHV1OR15-3 chr15 22178107 22178542 - IG_V_pseudogene KNOWN OTTHUMG00000184673.1 436 351 2 ENSG00000259261.2 IGHV4OR15-8 chr15 22184967 22185402 - IG_V_gene KNOWN OTTHUMG00000171934.2 436 353 2 ENSG00000270356.1 IGHV1OR15-4 chr15 22194885 22195317 - IG_V_pseudogene KNOWN OTTHUMG00000176336.2 433 348 2 ENSG00000271507.1 RP11-603B24.6 chr15 22202392 22202734 - unprocessed_pseudogene KNOWN OTTHUMG00000184682.1 343 343 1 ENSG00000221641.1 MIR1268A chr15 22225278 22225329 - miRNA KNOWN NA 52 52 1 ENSG00000207108.1 Y_RNA chr1 185630428 185630528 - misc_RNA NOVEL NA 101 101 1 ENSG00000259098.1 RP11-603B24.2 chr15 22258138 22258848 + processed_pseudogene KNOWN OTTHUMG00000171790.1 711 711 1 ENSG00000258732.1 RP11-603B24.1 chr15 22278971 22282872 + unprocessed_pseudogene KNOWN OTTHUMG00000171791.2 3902 378 2 ENSG00000274835.1 RP11-566K19.11 chr15 22360639 22360918 + unprocessed_pseudogene KNOWN OTTHUMG00000188448.1 280 280 1 ENSG00000273679.1 RP11-566K19.8 chr15 22371736 22373570 + processed_pseudogene KNOWN OTTHUMG00000188433.1 1835 1835 1 ENSG00000274279.1 RP11-566K19.7 chr15 22401208 22406944 + unprocessed_pseudogene KNOWN OTTHUMG00000188383.1 5737 4214 4 ENSG00000185182.13 GOLGA8DP chr15 22427039 22437902 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000171882.2 10864 2837 36 ENSG00000221000.1 AC100757.1 chr15 22428246 22428328 - miRNA NOVEL NA 83 83 1 ENSG00000274568.1 Metazoa_SRP chr15 22429200 22429489 - misc_RNA NOVEL NA 290 290 1 ENSG00000275363.1 RP11-566K19.12 chr15 22451209 22455154 + unprocessed_pseudogene KNOWN OTTHUMG00000188589.1 3946 1406 3 ENSG00000277865.3 GOLGA6L22 chr15 22458903 22469230 + protein_coding PUTATIVE OTTHUMG00000171883.4 10328 4405 20 ENSG00000201596.1 Y_RNA chr1 185634073 185634182 - misc_RNA NOVEL NA 110 110 1 ENSG00000281909.1 RP11-439M15.1 chr15 22480439 22484840 - unprocessed_pseudogene KNOWN OTTHUMG00000190239.1 4402 759 4 ENSG00000276550.3 HERC2P2 chr15 22495570 22590815 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000188262.2 95246 6965 77 ENSG00000277561.3 GOLGA8IP chr15 22607540 22617854 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000188601.1 10315 2598 30 ENSG00000274728.1 AC091565.1 chr15 22608148 22608230 - miRNA NOVEL NA 83 83 1 ENSG00000277515.1 Metazoa_SRP chr15 22609141 22609377 - misc_RNA NOVEL NA 237 237 1 ENSG00000276141.3 WHAMML1 chr15 22664359 22686213 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000188382.1 21855 7269 25 ENSG00000277435.1 RP11-1180F24.1 chr15 22690454 22691158 - processed_pseudogene KNOWN OTTHUMG00000188377.1 705 705 1 ENSG00000277867.1 AC138649.1 chr15 22714939 22715225 + processed_pseudogene KNOWN OTTHUMG00000188376.1 287 287 1 ENSG00000275325.3 RP11-26F2.1 chr15 22727104 22744918 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000188375.1 17815 1283 10 ENSG00000277755.1 RP11-26F2.2 chr15 22756172 22756729 - processed_pseudogene KNOWN OTTHUMG00000188374.1 558 254 2 ENSG00000261729.1 GS1-204I12.4 chr1 185655002 185657168 + lincRNA NOVEL OTTHUMG00000176308.1 2167 901 2 ENSG00000274253.3 RP11-566K19.6 chr15 22757857 22778741 + sense_overlapping NOVEL OTTHUMG00000171917.4 20885 1640 11 ENSG00000259425.4 RP11-566K19.5 chr15 22770523 22776199 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000171918.3 5677 1623 20 ENSG00000170113.14 NIPA1 chr15 22773063 22829791 + protein_coding KNOWN OTTHUMG00000129099.4 56729 8700 36 ENSG00000140157.13 NIPA2 chr15 22838641 22868384 + protein_coding KNOWN OTTHUMG00000129101.2 29744 3505 49 ENSG00000273749.3 CYFIP1 chr15 22867052 22981063 - protein_coding KNOWN OTTHUMG00000129100.6 114012 10414 136 ENSG00000275835.3 TUBGCP5 chr15 22983192 23039673 - protein_coding KNOWN OTTHUMG00000188371.1 56482 6478 97 ENSG00000276172.1 ELMO2P1 chr15 23083094 23121324 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000188345.2 38231 1011 12 ENSG00000273976.1 GOLGA6L1 chr15 23128268 23136822 - protein_coding KNOWN OTTHUMG00000171928.3 8555 2620 9 ENSG00000277505.1 RP11-467N20.6 chr15 23140563 23144422 - unprocessed_pseudogene KNOWN OTTHUMG00000171929.4 3860 668 4 ENSG00000175676.14 GOLGA8EP chr15 23157366 23170711 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000167132.2 13346 5256 37 ENSG00000143341.10 HMCN1 chr1 185734551 186190949 + protein_coding KNOWN OTTHUMG00000059337.2 456399 18579 133 ENSG00000273981.1 Metazoa_SRP chr15 23165897 23166186 + misc_RNA NOVEL NA 290 290 1 ENSG00000238347.1 AC116165.1 chr15 23167058 23167140 + miRNA NOVEL NA 83 83 1 ENSG00000274099.1 ABCB10P1 chr15 23179869 23182049 + processed_pseudogene KNOWN OTTHUMG00000188344.1 2181 2181 1 ENSG00000278541.1 RP11-467N20.8 chr15 23193491 23193696 + processed_pseudogene KNOWN OTTHUMG00000188343.1 206 206 1 ENSG00000276941.1 MIR4509-2 chr15 23197827 23197920 + miRNA KNOWN NA 94 94 1 ENSG00000278552.1 RP11-467N20.7 chr15 23225876 23226391 - unprocessed_pseudogene KNOWN OTTHUMG00000188341.1 516 400 2 ENSG00000259414.1 HERC2P7 chr15 23289303 23293667 - unprocessed_pseudogene KNOWN OTTHUMG00000171927.2 4365 726 4 ENSG00000274471.1 HERC2P2 chr15 23309607 23313276 + unprocessed_pseudogene KNOWN OTTHUMG00000171926.4 3670 883 6 ENSG00000273756.3 RP11-566K19.9 chr15 23326256 23334127 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000176395.4 7872 1816 16 ENSG00000260399.1 RP11-529J17.5 chr15 23337985 23341848 - unprocessed_pseudogene KNOWN OTTHUMG00000176414.1 3864 682 4 ENSG00000224691.1 GS1-174L6.4 chr1 186176814 186177302 - antisense NOVEL OTTHUMG00000042129.1 489 353 2 ENSG00000261739.2 GOLGA8S chr15 23354748 23367231 + protein_coding KNOWN OTTHUMG00000176415.2 12484 4349 37 ENSG00000275876.1 AC100756.2 chr15 23361206 23361274 + miRNA NOVEL NA 69 69 1 ENSG00000278222.1 Metazoa_SRP chr15 23363272 23363561 + misc_RNA NOVEL NA 290 290 1 ENSG00000238737.1 AC100756.1 chr15 23364444 23364526 + miRNA NOVEL NA 83 83 1 ENSG00000261418.1 RP11-529J17.3 chr15 23430839 23435212 + unprocessed_pseudogene KNOWN OTTHUMG00000176416.1 4374 736 4 ENSG00000174450.10 GOLGA6L2 chr15 23439498 23447234 - protein_coding KNOWN OTTHUMG00000176417.1 7737 3030 32 ENSG00000265673.1 MIR4508 chr15 23562062 23562131 - miRNA KNOWN NA 70 70 1 ENSG00000179455.7 MKRN3 chr15 23565678 23630075 + protein_coding KNOWN OTTHUMG00000129160.3 64398 5731 12 ENSG00000281873.1 AC126407.1 chr15 23565857 23566366 - protein_coding NOVEL NA 510 96 2 ENSG00000260978.1 MKRN3-AS1 chr15 23567264 23569657 - antisense KNOWN OTTHUMG00000176418.1 2394 566 2 ENSG00000116690.10 PRG4 chr1 186296279 186314562 + protein_coding KNOWN OTTHUMG00000035574.3 18284 5044 45 ENSG00000254585.2 MAGEL2 chr15 23643544 23647841 - protein_coding KNOWN OTTHUMG00000167582.3 4298 4298 1 ENSG00000182636.5 NDN chr15 23685400 23687330 - protein_coding KNOWN OTTHUMG00000129161.2 1931 1931 1 ENSG00000206616.1 RNU6-741P chr15 23777437 23777543 - snRNA KNOWN NA 107 107 1 ENSG00000261622.1 RP11-484P15.1 chr15 23912409 23941716 + lincRNA NOVEL OTTHUMG00000172886.1 29308 591 6 ENSG00000260232.1 PWRN4 chr15 23975172 24003435 + lincRNA NOVEL OTTHUMG00000172887.1 28264 420 4 ENSG00000260551.1 RP11-350A1.1 chr15 24162754 24169948 - lincRNA NOVEL OTTHUMG00000173073.1 7195 4824 6 ENSG00000260780.1 RP11-580I1.1 chr15 24206784 24225854 + lincRNA NOVEL OTTHUMG00000176383.1 19071 556 3 ENSG00000261621.1 RP11-580I1.2 chr15 24235078 24276829 + lincRNA NOVEL OTTHUMG00000176384.1 41752 865 6 ENSG00000260959.1 RP11-350A1.2 chr15 24238145 24240192 - lincRNA NOVEL OTTHUMG00000176385.1 2048 472 2 ENSG00000261598.1 RP11-107D24.2 chr15 24299749 24300638 + lincRNA NOVEL OTTHUMG00000176386.1 890 415 2 ENSG00000263676.1 MIR4632 chr1 12191713 12191773 + miRNA KNOWN NA 61 61 1 ENSG00000047410.12 TPR chr1 186311652 186375693 - protein_coding KNOWN OTTHUMG00000035580.3 64042 12350 111 ENSG00000260760.1 PWRN3 chr15 24441127 24447967 + lincRNA NOVEL OTTHUMG00000176387.1 6841 849 4 ENSG00000259905.4 PWRN1 chr15 24493137 24652130 + lincRNA KNOWN OTTHUMG00000173077.4 158994 4833 53 ENSG00000185823.3 NPAP1 chr15 24675868 24683393 + protein_coding KNOWN OTTHUMG00000129179.1 7526 7526 1 ENSG00000128739.19 SNRPN chr15 24823647 24978723 + protein_coding KNOWN OTTHUMG00000129180.34 155077 2919 102 ENSG00000280118.1 RP11-385H1.1 chr15 24848357 24852253 + TEC KNOWN OTTHUMG00000176877.1 3897 3897 1 ENSG00000241061.3 RPL5P1 chr15 24908932 24909825 - processed_pseudogene KNOWN OTTHUMG00000157866.1 894 894 1 ENSG00000242088.1 AC090602.2 chr15 24910874 24911125 - processed_pseudogene KNOWN OTTHUMG00000157867.1 252 252 1 ENSG00000273173.4 SNURF chr15 24954986 24977850 + protein_coding KNOWN OTTHUMG00000186421.22 22865 1175 14 ENSG00000214265.10 SNURF chr15 24955034 25000276 + protein_coding KNOWN OTTHUMG00000129181.11 45243 1590 15 ENSG00000224078.11 SNHG14 chr15 24978583 25419462 + processed_transcript KNOWN OTTHUMG00000056661.10 440880 36573 245 ENSG00000202025.1 RNU6-1240P chr1 186311825 186311928 - snRNA KNOWN NA 104 104 1 ENSG00000276314.1 SNORD107 chr15 24981994 24982068 + snoRNA KNOWN NA 75 75 1 ENSG00000270704.3 RP11-701H24.5 chr15 24984864 24985173 + sense_intronic NOVEL OTTHUMG00000184193.1 310 310 1 ENSG00000279192.1 PWAR5 chr15 24985053 24988232 + TEC KNOWN OTTHUMG00000184194.1 3180 3180 1 ENSG00000276610.1 SNORD64 chr15 24985100 24985166 + snoRNA KNOWN NA 67 67 1 ENSG00000239014.1 SNORD108 chr15 24986925 24986995 + snoRNA KNOWN NA 71 71 1 ENSG00000271347.1 RP11-701H24.7 chr15 24991486 24991753 + sense_intronic NOVEL OTTHUMG00000184195.1 268 268 1 ENSG00000257647.1 RP11-701H24.3 chr15 25027736 25032047 - lincRNA NOVEL OTTHUMG00000170275.1 4312 427 2 ENSG00000257151.1 PWAR6 chr15 25031873 25036490 + lincRNA NOVEL OTTHUMG00000170276.1 4618 4618 1 ENSG00000270246.3 RP11-701H24.8 chr15 25041918 25042428 + sense_intronic NOVEL OTTHUMG00000184196.1 511 511 1 ENSG00000274640.1 SNORD109B chr15 25041974 25042040 + snoRNA KNOWN NA 67 67 1 ENSG00000157181.13 C1orf27 chr1 186375758 186421378 + protein_coding KNOWN OTTHUMG00000035579.4 45621 4153 58 ENSG00000207063.1 SNORD116-1 chr15 25051477 25051571 + snoRNA KNOWN NA 95 95 1 ENSG00000207001.1 SNORD116-2 chr15 25054210 25054304 + snoRNA KNOWN NA 95 95 1 ENSG00000207014.1 SNORD116-3 chr15 25056860 25056954 + snoRNA KNOWN NA 95 95 1 ENSG00000275529.1 SNORD116-4 chr15 25059538 25059633 + snoRNA KNOWN NA 96 96 1 ENSG00000207191.1 SNORD116-5 chr15 25062333 25062427 + snoRNA KNOWN NA 95 95 1 ENSG00000207442.1 SNORD116-6 chr15 25065026 25065121 + snoRNA KNOWN NA 96 96 1 ENSG00000207133.1 SNORD116-7 chr15 25067788 25067882 + snoRNA KNOWN NA 95 95 1 ENSG00000207093.1 SNORD116-8 chr15 25070432 25070526 + snoRNA KNOWN NA 95 95 1 ENSG00000206727.1 SNORD116-9 chr15 25073107 25073201 + snoRNA KNOWN NA 95 95 1 ENSG00000200661.1 SNORD116-10 chr15 25074114 25074215 + snoRNA KNOWN NA 102 102 1 ENSG00000279374.1 AL596220.1 chr1 186394991 186396776 - protein_coding KNOWN NA 1786 135 3 ENSG00000206609.1 SNORD116-11 chr15 25075929 25076020 + snoRNA KNOWN NA 92 92 1 ENSG00000207197.1 SNORD116-12 chr15 25077051 25077142 + snoRNA KNOWN NA 92 92 1 ENSG00000207137.1 SNORD116-13 chr15 25079058 25079149 + snoRNA KNOWN NA 92 92 1 ENSG00000206621.1 SNORD116-14 chr15 25080142 25080233 + snoRNA KNOWN NA 92 92 1 ENSG00000207174.1 SNORD116-15 chr15 25081287 25081378 + snoRNA KNOWN NA 92 92 1 ENSG00000207263.1 SNORD116-16 chr15 25082768 25082859 + snoRNA KNOWN NA 92 92 1 ENSG00000206656.1 SNORD116-17 chr15 25083588 25083679 + snoRNA KNOWN NA 92 92 1 ENSG00000206688.1 SNORD116-18 chr15 25085385 25085476 + snoRNA KNOWN NA 92 92 1 ENSG00000207460.1 SNORD116-19 chr15 25086527 25086618 + snoRNA KNOWN NA 92 92 1 ENSG00000261069.3 RP11-701H24.4 chr15 25087661 25088896 + lincRNA NOVEL OTTHUMG00000176878.1 1236 1236 1 ENSG00000262180.1 OCLM chr1 186400572 186401455 + protein_coding KNOWN OTTHUMG00000177601.1 884 884 1 ENSG00000278715.1 SNORD116-20 chr15 25087662 25087753 + snoRNA KNOWN NA 92 92 1 ENSG00000277785.1 SNORD116-21 chr15 25088804 25088895 + snoRNA KNOWN NA 92 92 1 ENSG00000275127.1 SNORD116-22 chr15 25089923 25090014 + snoRNA KNOWN NA 92 92 1 ENSG00000207375.1 SNORD116-23 chr15 25091786 25091877 + snoRNA KNOWN NA 92 92 1 ENSG00000279735.1 AC124312.1 chr15 25091960 25092377 - protein_coding NOVEL NA 418 418 1 ENSG00000207279.1 SNORD116-24 chr15 25094037 25094128 + snoRNA KNOWN NA 92 92 1 ENSG00000252326.1 SNORD116-25 chr15 25097663 25097754 + snoRNA KNOWN NA 92 92 1 ENSG00000251815.1 SNORD116-26 chr15 25099499 25099594 + snoRNA KNOWN NA 96 96 1 ENSG00000251896.1 SNORD116-27 chr15 25101575 25101666 + snoRNA KNOWN NA 92 92 1 ENSG00000278123.1 SNORD116-28 chr15 25104642 25104732 + snoRNA KNOWN NA 91 91 1 ENSG00000229739.2 RP11-295K2.3 chr1 186435161 186470291 + antisense NOVEL OTTHUMG00000035581.2 35131 760 7 ENSG00000207245.1 SNORD116-29 chr15 25106521 25106603 + snoRNA KNOWN NA 83 83 1 ENSG00000252277.1 SNORD116-30 chr15 25108268 25108352 + snoRNA KNOWN NA 85 85 1 ENSG00000270523.1 RP11-145P16.3 chr15 25130978 25131337 + sense_intronic NOVEL OTTHUMG00000184197.1 360 360 1 ENSG00000279050.1 PWAR1 chr15 25135642 25138055 + TEC KNOWN OTTHUMG00000176879.1 2414 2414 1 ENSG00000212428.1 SNORD115 chr15 25159221 25159279 + snoRNA NOVEL NA 59 59 1 ENSG00000270814.1 TMEM261P1 chr15 25169337 25169676 - processed_pseudogene KNOWN OTTHUMG00000184800.1 340 340 1 ENSG00000201831.1 SNORD115-1 chr15 25170723 25170804 + snoRNA KNOWN NA 82 82 1 ENSG00000199712.1 SNORD115-2 chr15 25172635 25172716 + snoRNA KNOWN NA 82 82 1 ENSG00000199970.1 SNORD115-3 chr15 25174927 25175008 + snoRNA KNOWN NA 82 82 1 ENSG00000200680.1 SNORD115-4 chr15 25176832 25176913 + snoRNA KNOWN NA 82 82 1 ENSG00000116703.13 PDC chr1 186443566 186461122 - protein_coding KNOWN OTTHUMG00000035575.3 17557 1339 7 ENSG00000200503.1 SNORD115-5 chr15 25178738 25178819 + snoRNA KNOWN NA 82 82 1 ENSG00000200812.1 SNORD115-6 chr15 25180497 25180578 + snoRNA KNOWN NA 82 82 1 ENSG00000278089.1 SNORD115-7 chr15 25182385 25182466 + snoRNA KNOWN NA 82 82 1 ENSG00000200726.1 SNORD115-8 chr15 25184306 25184387 + snoRNA KNOWN NA 82 82 1 ENSG00000199782.1 SNORD115-9 chr15 25185631 25185712 + snoRNA KNOWN NA 82 82 1 ENSG00000201943.1 SNORD115-10 chr15 25187536 25187616 + snoRNA KNOWN NA 81 81 1 ENSG00000200486.1 SNORD115-11 chr15 25189414 25189495 + snoRNA KNOWN NA 82 82 1 ENSG00000199453.1 SNORD115-12 chr15 25191416 25191497 + snoRNA KNOWN NA 82 82 1 ENSG00000273835.1 SNORD115-13 chr15 25193321 25193402 + snoRNA KNOWN NA 82 82 1 ENSG00000199960.1 SNORD115-14 chr15 25194921 25195001 + snoRNA KNOWN NA 81 81 1 ENSG00000273198.1 GS1-304P7.3 chr1 186521773 186522304 + lincRNA NOVEL OTTHUMG00000186483.1 532 532 1 ENSG00000201679.1 SNORD115-15 chr15 25197576 25197656 + snoRNA KNOWN NA 81 81 1 ENSG00000200757.1 SNORD115-16 chr15 25199448 25199529 + snoRNA KNOWN NA 82 82 1 ENSG00000201482.1 SNORD115-17 chr15 25201323 25201404 + snoRNA KNOWN NA 82 82 1 ENSG00000200163.1 SNORD115-18 chr15 25203227 25203308 + snoRNA KNOWN NA 82 82 1 ENSG00000199968.1 SNORD115-19 chr15 25204357 25204438 + snoRNA KNOWN NA 82 82 1 ENSG00000201969.1 SNORD115-20 chr15 25206262 25206343 + snoRNA KNOWN NA 82 82 1 ENSG00000199833.1 SNORD115-21 chr15 25208083 25208163 + snoRNA KNOWN NA 81 81 1 ENSG00000201326.1 SNORD115-22 chr15 25209918 25209999 + snoRNA KNOWN NA 82 82 1 ENSG00000201331.1 SNORD115-23 chr15 25211796 25211877 + snoRNA KNOWN NA 82 82 1 ENSG00000200398.1 SNORD115-24 chr15 25213648 25213729 + snoRNA KNOWN NA 82 82 1 ENSG00000228238.1 GS1-304P7.2 chr1 186578279 186579299 + processed_pseudogene KNOWN OTTHUMG00000035475.1 1021 1021 1 ENSG00000199489.1 SNORD115-25 chr15 25215541 25215622 + snoRNA KNOWN NA 82 82 1 ENSG00000275524.1 SNORD115-26 chr15 25218617 25218698 + snoRNA KNOWN NA 82 82 1 ENSG00000201300.1 SNORD115-27 chr15 25220497 25220578 + snoRNA KNOWN NA 82 82 1 ENSG00000200801.1 SNORD115-28 chr15 25222348 25222428 + snoRNA KNOWN NA 81 81 1 ENSG00000199704.1 SNORD115-29 chr15 25223246 25223327 + snoRNA KNOWN NA 82 82 1 ENSG00000200987.1 SNORD115-30 chr15 25225203 25225284 + snoRNA KNOWN NA 82 82 1 ENSG00000202188.1 SNORD115-31 chr15 25227109 25227190 + snoRNA KNOWN NA 82 82 1 ENSG00000200949.1 SNORD115-32 chr15 25228967 25229048 + snoRNA KNOWN NA 82 82 1 ENSG00000200593.1 SNORD115-33 chr15 25230838 25230919 + snoRNA KNOWN NA 82 82 1 ENSG00000199311.1 SNORD115-34 chr15 25232387 25232468 + snoRNA KNOWN NA 82 82 1 ENSG00000233196.2 GS1-304P7.1 chr1 186580515 186581191 - processed_pseudogene KNOWN OTTHUMG00000035474.2 677 677 1 ENSG00000201992.1 SNORD115-35 chr15 25234247 25234328 + snoRNA KNOWN NA 82 82 1 ENSG00000202499.1 SNORD115-36 chr15 25236085 25236166 + snoRNA KNOWN NA 82 82 1 ENSG00000200638.1 SNORD115-37 chr15 25237986 25238067 + snoRNA KNOWN NA 82 82 1 ENSG00000201907.1 SNORD115-38 chr15 25239838 25239919 + snoRNA KNOWN NA 82 82 1 ENSG00000200564.1 SNORD115-39 chr15 25241746 25241827 + snoRNA KNOWN NA 82 82 1 ENSG00000272460.1 SNORD115-40 chr15 25243614 25243695 + snoRNA KNOWN NA 82 82 1 ENSG00000200478.1 SNORD115-41 chr15 25245478 25245559 + snoRNA KNOWN NA 82 82 1 ENSG00000201143.1 SNORD115-42 chr15 25247345 25247426 + snoRNA KNOWN NA 82 82 1 ENSG00000202373.1 SNORD115-43 chr15 25249198 25249279 + snoRNA KNOWN NA 82 82 1 ENSG00000202261.1 SNORD115-44 chr15 25250859 25250940 + snoRNA KNOWN NA 82 82 1 ENSG00000225196.2 RP5-1118D24.2 chr1 12220794 12221109 - processed_pseudogene KNOWN OTTHUMG00000004233.3 316 316 1 ENSG00000275000.1 AL096803.1 chr1 186586187 186586269 + miRNA NOVEL NA 83 83 1 ENSG00000280234.1 RP11-145P16.2 chr15 25255579 25257027 + TEC KNOWN OTTHUMG00000176880.1 1449 1449 1 ENSG00000212380.1 SNORD115-45 chr15 25264510 25264590 + snoRNA KNOWN NA 81 81 1 ENSG00000276844.1 SNORD115-46 chr15 25266591 25266661 + snoRNA KNOWN NA 71 71 1 ENSG00000212528.1 SNORD115-47 chr15 25268466 25268551 + snoRNA KNOWN NA 86 86 1 ENSG00000201634.1 SNORD115-48 chr15 25269783 25269858 + snoRNA KNOWN NA 76 76 1 ENSG00000239169.1 SNORD109B chr15 25278343 25278409 + snoRNA KNOWN NA 67 67 1 ENSG00000114062.16 UBE3A chr15 25333728 25439056 - protein_coding KNOWN OTTHUMG00000171548.8 105329 11766 170 ENSG00000261529.1 RP13-487P22.1 chr15 25345633 25347235 - sense_intronic NOVEL OTTHUMG00000176881.1 1603 1603 1 ENSG00000235731.1 AC124997.1 chr15 25484831 25578791 - lincRNA NOVEL OTTHUMG00000056663.1 93961 2491 4 ENSG00000223628.2 AC023449.2 chr15 25580969 25581122 + processed_pseudogene KNOWN OTTHUMG00000056665.2 154 154 1 ENSG00000073756.10 PTGS2 chr1 186671791 186680427 - protein_coding KNOWN OTTHUMG00000035473.3 8637 5269 35 ENSG00000206190.10 ATP10A chr15 25677273 25865172 - protein_coding KNOWN OTTHUMG00000171703.1 187900 8409 62 ENSG00000274307.1 RP11-345J18.2 chr15 25708470 25710869 - sense_intronic NOVEL OTTHUMG00000186727.1 2400 2400 1 ENSG00000222123.1 RNA5SP390 chr15 25738508 25738620 + rRNA KNOWN NA 113 113 1 ENSG00000281355.1 Y_RNA chr15 25817983 25818070 + misc_RNA NOVEL NA 88 88 1 ENSG00000266517.1 MIR4715 chr15 25848747 25848825 - miRNA KNOWN NA 79 79 1 ENSG00000259011.1 RP11-2C7.1 chr15 25865295 25877211 + lincRNA NOVEL OTTHUMG00000171718.1 11917 729 2 ENSG00000206187.3 RP11-1084I9.1 chr15 25902360 26053120 + lincRNA NOVEL OTTHUMG00000171719.1 150761 2355 7 ENSG00000258965.2 RP11-446P9.1 chr15 25928146 25928575 - processed_pseudogene KNOWN OTTHUMG00000171720.2 430 430 1 ENSG00000212604.1 SNORA48 chr15 26008940 26009074 - snoRNA NOVEL NA 135 135 1 ENSG00000258931.1 RP11-1084I9.2 chr15 26050538 26052276 - lincRNA NOVEL OTTHUMG00000171721.1 1739 877 2 ENSG00000273129.1 PACERR chr1 186680622 186681446 + lincRNA NOVEL OTTHUMG00000186484.1 825 825 1 ENSG00000259150.4 LINC00929 chr15 26115813 26133037 + lincRNA NOVEL OTTHUMG00000171722.1 17225 1994 19 ENSG00000235160.1 AC009878.2 chr15 26395072 26446774 + lincRNA NOVEL OTTHUMG00000056666.1 51703 949 5 ENSG00000166206.12 GABRB3 chr15 26543546 26939539 - protein_coding KNOWN OTTHUMG00000129231.6 395994 12730 105 ENSG00000278840.1 RP11-345N11.1 chr15 26557598 26557937 - sense_intronic NOVEL OTTHUMG00000186728.1 340 340 1 ENSG00000235518.2 AC011196.3 chr15 26657030 26658763 - lincRNA NOVEL OTTHUMG00000056662.2 1734 595 2 ENSG00000242793.1 AC135999.2 chr15 26851132 26851610 - processed_pseudogene KNOWN OTTHUMG00000157870.1 479 479 1 ENSG00000186297.10 GABRA5 chr15 26866363 26949207 + protein_coding KNOWN OTTHUMG00000171824.3 82845 4154 69 ENSG00000259122.2 TVP23BP1 chr15 26964917 26970385 + unprocessed_pseudogene KNOWN OTTHUMG00000171825.2 5469 617 2 ENSG00000182256.11 GABRG3 chr15 26971282 27541991 + protein_coding KNOWN OTTHUMG00000044462.4 570710 12595 40 ENSG00000228740.2 GABRG3-AS1 chr15 27157615 27161319 - antisense NOVEL OTTHUMG00000056664.2 3705 970 3 ENSG00000116711.9 PLA2G4A chr1 186828953 186988981 + protein_coding KNOWN OTTHUMG00000035512.1 160029 2875 25 ENSG00000214254.3 AC136896.2 chr15 27208089 27208635 - processed_pseudogene KNOWN OTTHUMG00000056660.1 547 547 1 ENSG00000200326.1 RNA5SP391 chr15 27280318 27280436 - rRNA KNOWN NA 119 119 1 ENSG00000258624.1 SERPINE4P chr15 27340524 27340804 + processed_pseudogene KNOWN OTTHUMG00000171826.1 281 281 1 ENSG00000261426.1 AC144833.1 chr15 27362310 27366398 + sense_intronic NOVEL OTTHUMG00000171827.1 4089 4089 1 ENSG00000258970.1 RP11-100M12.1 chr15 27418796 27420735 - antisense NOVEL OTTHUMG00000171828.1 1940 380 2 ENSG00000259152.1 RP11-100M12.2 chr15 27422381 27428338 + sense_intronic NOVEL OTTHUMG00000171829.1 5958 318 2 ENSG00000275847.1 AC104002.1 chr15 27449182 27449242 + miRNA NOVEL NA 61 61 1 ENSG00000259168.1 RP11-100M12.3 chr15 27483035 27541991 - antisense NOVEL OTTHUMG00000171830.1 58957 1362 4 ENSG00000258594.1 RP11-30G8.2 chr15 27621534 27629289 + lincRNA NOVEL OTTHUMG00000171831.1 7756 336 3 ENSG00000258853.1 RP11-30G8.1 chr15 27684498 27685768 - lincRNA NOVEL OTTHUMG00000171832.1 1271 209 2 ENSG00000236030.1 LINC01036 chr1 187092842 187360323 + lincRNA NOVEL OTTHUMG00000035513.1 267482 858 4 ENSG00000104044.14 OCA2 chr15 27754875 28099358 - protein_coding KNOWN OTTHUMG00000128871.2 344484 3299 60 ENSG00000232394.1 AC090696.2 chr15 27775621 27776798 + antisense NOVEL OTTHUMG00000128937.1 1178 418 2 ENSG00000228992.2 RPL5P32 chr15 27895704 27896582 + processed_pseudogene KNOWN OTTHUMG00000128936.2 879 879 1 ENSG00000128731.14 HERC2 chr15 28111040 28322152 - protein_coding KNOWN OTTHUMG00000129251.3 211113 20027 154 ENSG00000256338.2 RPL41P2 chr15 28315651 28316059 + processed_pseudogene KNOWN OTTHUMG00000186844.3 409 409 1 ENSG00000261401.1 RP11-578F21.3 chr15 28332237 28336609 + unprocessed_pseudogene KNOWN OTTHUMG00000175870.1 4373 716 4 ENSG00000261561.1 RP11-536P16.2 chr15 28346490 28346647 + unprocessed_pseudogene KNOWN OTTHUMG00000175871.1 158 158 1 ENSG00000237850.6 RP11-483E23.2 chr15 28349051 28358080 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000175872.1 9030 3100 18 ENSG00000261497.1 RP11-483E23.3 chr15 28362796 28365731 - unprocessed_pseudogene KNOWN OTTHUMG00000175873.1 2936 620 3 ENSG00000153684.13 GOLGA8F chr15 28378621 28392018 + protein_coding KNOWN OTTHUMG00000167129.3 13398 5663 57 ENSG00000231599.1 LINC01037 chr1 187443606 187477222 + lincRNA NOVEL OTTHUMG00000035479.1 33617 493 5 ENSG00000276891.1 Metazoa_SRP chr15 28387196 28387485 + misc_RNA NOVEL NA 290 290 1 ENSG00000221050.1 AC091304.1 chr15 28388369 28388451 + miRNA NOVEL NA 83 83 1 ENSG00000261524.1 ABCB10P3 chr15 28402868 28405033 + processed_pseudogene KNOWN OTTHUMG00000175874.1 2166 2166 1 ENSG00000276928.1 RP11-483E23.9 chr15 28416449 28416674 + unprocessed_pseudogene KNOWN OTTHUMG00000187852.1 226 226 1 ENSG00000274532.1 RP11-483E23.10 chr15 28422172 28422373 + unprocessed_pseudogene KNOWN OTTHUMG00000187853.1 202 202 1 ENSG00000266039.1 MIR4509-1 chr15 28426491 28426584 + miRNA KNOWN NA 94 94 1 ENSG00000260159.1 RP11-483E23.4 chr15 28454660 28457783 - unprocessed_pseudogene KNOWN OTTHUMG00000175875.1 3124 760 3 ENSG00000261365.1 RP11-483E23.5 chr15 28473322 28473448 - unprocessed_pseudogene KNOWN OTTHUMG00000175876.1 127 127 1 ENSG00000263964.1 MIR4509-3 chr15 28490752 28490845 - miRNA KNOWN NA 94 94 1 ENSG00000274814.1 RP11-536P16.5 chr15 28494975 28495182 - unprocessed_pseudogene KNOWN OTTHUMG00000187855.1 208 208 1 ENSG00000272827.1 RP11-445P19.3 chr1 187480293 187480614 + lincRNA NOVEL OTTHUMG00000186488.1 322 322 1 ENSG00000260053.2 ABCB10P4 chr15 28506625 28508808 - processed_pseudogene KNOWN OTTHUMG00000175877.2 2184 2184 1 ENSG00000183629.12 GOLGA8G chr15 28519611 28533014 - protein_coding KNOWN OTTHUMG00000167134.2 13404 6529 100 ENSG00000238607.1 AC138749.1 chr15 28523185 28523267 - miRNA NOVEL NA 83 83 1 ENSG00000276955.1 Metazoa_SRP chr15 28524151 28524440 - misc_RNA NOVEL NA 290 290 1 ENSG00000261041.1 RP11-536P16.4 chr15 28545912 28549777 + unprocessed_pseudogene KNOWN OTTHUMG00000175878.1 3866 622 4 ENSG00000227717.4 RP11-578F21.4 chr15 28553638 28561379 + unprocessed_pseudogene KNOWN OTTHUMG00000175879.1 7742 2472 8 ENSG00000260444.1 RP11-483E23.7 chr15 28564986 28565152 - unprocessed_pseudogene KNOWN OTTHUMG00000175880.1 167 167 1 ENSG00000261581.1 HERC2P11 chr15 28575019 28579400 - unprocessed_pseudogene KNOWN OTTHUMG00000175881.1 4382 725 4 ENSG00000206149.9 HERC2P9 chr15 28589492 28685264 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000167114.3 95773 8310 90 ENSG00000254398.1 RP11-578F21.2 chr15 28679405 28682252 - unprocessed_pseudogene KNOWN OTTHUMG00000167128.1 2848 546 3 ENSG00000271558.1 RP11-445P19.2 chr1 187506838 187507119 - processed_pseudogene KNOWN OTTHUMG00000184459.1 282 260 2 ENSG00000188626.6 GOLGA8M chr15 28701954 28738384 - protein_coding KNOWN OTTHUMG00000176338.1 36431 2202 25 ENSG00000238340.1 AC055876.2 chr15 28702562 28702644 - miRNA NOVEL NA 83 83 1 ENSG00000274632.1 Metazoa_SRP chr15 28703554 28703790 - misc_RNA NOVEL NA 237 237 1 ENSG00000261480.1 RP11-578F21.6 chr15 28719377 28738431 - lincRNA NOVEL OTTHUMG00000176339.1 19055 557 2 ENSG00000248334.5 WHAMMP2 chr15 28737583 28759204 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000176340.2 21622 6657 22 ENSG00000260844.2 RP11-578F21.9 chr15 28763440 28764151 - processed_pseudogene KNOWN OTTHUMG00000176342.2 712 712 1 ENSG00000232431.3 RP11-578F21.10 chr15 28788243 28792002 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000176343.1 3760 965 4 ENSG00000256951.1 AC055876.1 chr15 28789199 28789486 + transcribed_processed_pseudogene KNOWN OTTHUMG00000147359.2 288 288 1 ENSG00000261377.4 PDCD6IPP2 chr15 28789664 28859007 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000176344.3 69344 5244 33 ENSG00000271616.1 RP11-578F21.13 chr15 28830619 28831182 - processed_pseudogene KNOWN OTTHUMG00000184806.1 564 259 2 ENSG00000228012.1 RP11-393M18.1 chr1 187536101 187536299 - processed_pseudogene KNOWN OTTHUMG00000035480.1 199 199 1 ENSG00000261649.4 GOLGA6L7P chr15 28842235 28848675 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000176345.1 6441 2645 14 ENSG00000270301.1 WI2-2334D6.1 chr15 28857882 28858398 - processed_pseudogene KNOWN OTTHUMG00000184810.1 517 517 1 ENSG00000034053.13 APBA2 chr15 28884483 29118315 + protein_coding KNOWN OTTHUMG00000129255.3 233833 6869 109 ENSG00000259277.1 RP13-126C7.1 chr15 28970196 28977464 - antisense NOVEL OTTHUMG00000172184.1 7269 751 2 ENSG00000104059.4 FAM189A1 chr15 29120254 29570723 - protein_coding KNOWN OTTHUMG00000172185.1 450470 5545 25 ENSG00000259299.1 RP11-37J13.1 chr15 29233673 29235137 - processed_pseudogene KNOWN OTTHUMG00000172186.1 1465 1465 1 ENSG00000252868.1 snoZ278 chr15 29233868 29233979 + snoRNA NOVEL NA 112 112 1 ENSG00000185115.4 NDNL2 chr15 29268149 29269829 - protein_coding KNOWN OTTHUMG00000129261.1 1681 1681 1 ENSG00000259690.1 CTD-3118D7.1 chr15 29373602 29376956 - sense_intronic NOVEL OTTHUMG00000172187.1 3355 3355 1 ENSG00000259814.1 RP11-300A12.2 chr15 29609676 29611212 - lincRNA NOVEL OTTHUMG00000173076.1 1537 1537 1 ENSG00000225462.1 FDPSP1 chr1 187563061 187564131 + processed_pseudogene KNOWN OTTHUMG00000035481.1 1071 1071 1 ENSG00000259300.2 TUBBP8 chr15 29612570 29614274 + processed_pseudogene KNOWN OTTHUMG00000172188.3 1705 1232 2 ENSG00000256802.2 RP11-680F8.1 chr15 29674990 29680957 + antisense NOVEL OTTHUMG00000172189.1 5968 2736 4 ENSG00000104067.15 TJP1 chr15 29699367 29968865 - protein_coding KNOWN OTTHUMG00000137397.6 269499 11265 165 ENSG00000259644.1 RP11-680F8.4 chr15 29728186 29729531 - sense_intronic NOVEL OTTHUMG00000172190.1 1346 1346 1 ENSG00000234664.1 HMGN2P5 chr15 29730713 29730985 + processed_pseudogene KNOWN OTTHUMG00000172191.1 273 273 1 ENSG00000259523.1 RP11-680F8.3 chr15 29822631 29824081 + antisense NOVEL OTTHUMG00000172192.1 1451 1451 1 ENSG00000259749.1 CTD-2022H16.2 chr15 30005205 30006430 + unprocessed_pseudogene KNOWN OTTHUMG00000172195.1 1226 754 2 ENSG00000259647.1 RP11-143J24.1 chr15 30005443 30045848 - lincRNA NOVEL OTTHUMG00000172196.1 40406 485 2 ENSG00000260174.1 CTD-2022H16.3 chr15 30044455 30045296 + processed_pseudogene KNOWN OTTHUMG00000175634.1 842 673 2 ENSG00000229389.1 CTD-2022H16.1 chr15 30052942 30073064 - lincRNA NOVEL OTTHUMG00000156285.1 20123 693 4 ENSG00000252969.1 SNORA70 chr1 12221148 12221271 - snoRNA NOVEL NA 124 124 1 ENSG00000274702.1 RP11-393M18.5 chr1 187632166 187632439 + processed_pseudogene KNOWN OTTHUMG00000187544.1 274 274 1 ENSG00000179938.12 GOLGA8J chr15 30083053 30093499 + protein_coding KNOWN OTTHUMG00000175635.1 10447 2718 27 ENSG00000273818.1 Metazoa_SRP chr15 30091662 30091898 + misc_RNA NOVEL NA 237 237 1 ENSG00000221250.1 AC120045.1 chr15 30092809 30092891 + miRNA NOVEL NA 83 83 1 ENSG00000261792.1 DNM1P28 chr15 30098826 30102093 - unprocessed_pseudogene KNOWN OTTHUMG00000175636.1 3268 474 3 ENSG00000178081.11 ULK4P3 chr15 30103720 30131757 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000175637.1 28038 1487 21 ENSG00000207432.1 U8 chr15 30112198 30112330 + snoRNA NOVEL NA 133 133 1 ENSG00000261247.1 GOLGA8T chr15 30135149 30145567 + protein_coding KNOWN OTTHUMG00000175638.1 10419 2062 26 ENSG00000277637.1 Metazoa_SRP chr15 30143733 30143969 + misc_RNA NOVEL NA 237 237 1 ENSG00000221785.1 AC120045.2 chr15 30144877 30144959 + miRNA NOVEL NA 83 83 1 ENSG00000260897.1 DNM1P30 chr15 30150872 30153409 - unprocessed_pseudogene KNOWN OTTHUMG00000175639.1 2538 452 3 ENSG00000230426.2 ERVMER61-1 chr1 187641226 187643860 + lincRNA KNOWN OTTHUMG00000035624.2 2635 2395 4 ENSG00000261747.3 RP11-932O9.3 chr15 30153933 30154110 - unprocessed_pseudogene KNOWN OTTHUMG00000175640.1 178 178 1 ENSG00000259906.1 RP11-932O9.4 chr15 30170563 30179943 - lincRNA NOVEL OTTHUMG00000175641.1 9381 1198 4 ENSG00000225930.3 DKFZP434L187 chr15 30196036 30214540 + lincRNA NOVEL OTTHUMG00000175642.2 18505 4269 4 ENSG00000259993.1 RP11-261B23.1 chr15 30223017 30225564 + processed_pseudogene KNOWN OTTHUMG00000175643.1 2548 2548 1 ENSG00000206972.1 RNU6-17P chr15 30254402 30254508 - snRNA KNOWN NA 107 107 1 ENSG00000270955.1 RP11-261B23.2 chr15 30282533 30288389 + processed_pseudogene KNOWN OTTHUMG00000184854.1 5857 2098 10 ENSG00000279417.1 RP11-382B18.1 chr15 30344307 30348236 - TEC KNOWN OTTHUMG00000175644.1 3930 3930 1 ENSG00000238783.1 Y_RNA chr15 30355436 30355540 + misc_RNA NOVEL NA 105 105 1 ENSG00000166664.12 CHRFAM7A chr15 30357766 30393849 - protein_coding KNOWN OTTHUMG00000175645.3 36084 6837 47 ENSG00000263070.1 RP11-382B18.3 chr15 30380353 30386987 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000177735.1 6635 389 4 ENSG00000236401.1 SLC4A1APP2 chr1 187706561 187708898 + unprocessed_pseudogene KNOWN OTTHUMG00000035625.1 2338 1259 3 ENSG00000238519.1 U8 chr15 30384959 30385091 - snoRNA NOVEL NA 133 133 1 ENSG00000274966.1 RP11-382B18.6 chr15 30395146 30396368 + unprocessed_pseudogene KNOWN OTTHUMG00000187857.1 1223 478 2 ENSG00000186399.10 GOLGA8R chr15 30403740 30414162 - protein_coding KNOWN OTTHUMG00000175646.1 10423 4433 20 ENSG00000221723.1 AC019322.1 chr15 30404349 30404431 - miRNA NOVEL NA 83 83 1 ENSG00000274424.1 Metazoa_SRP chr15 30405307 30405597 - misc_RNA NOVEL NA 291 291 1 ENSG00000271333.1 RP11-382B18.5 chr15 30420283 30420429 - unprocessed_pseudogene KNOWN OTTHUMG00000184821.1 147 147 1 ENSG00000215302.7 CTD-3092A11.1 chr15 30470779 30507623 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000175647.1 36845 2331 15 ENSG00000270055.1 CTD-3092A11.2 chr15 30487963 30490313 + sense_intronic NOVEL OTTHUMG00000183910.1 2351 2351 1 ENSG00000260784.1 AC026150.6 chr15 30516079 30517867 + unprocessed_pseudogene KNOWN OTTHUMG00000175648.1 1789 1156 3 ENSG00000260693.1 AC026150.8 chr15 30540093 30545969 + lincRNA NOVEL OTTHUMG00000175650.1 5877 701 3 ENSG00000223847.1 RP5-925F19.1 chr1 187714243 187714735 - processed_pseudogene KNOWN OTTHUMG00000035626.1 493 493 1 ENSG00000178115.11 GOLGA8Q chr15 30552078 30562501 + protein_coding KNOWN OTTHUMG00000175651.1 10424 2137 22 ENSG00000277031.1 Metazoa_SRP chr15 30560644 30560934 + misc_RNA NOVEL NA 291 291 1 ENSG00000221593.1 AC026150.2 chr15 30561810 30561892 + miRNA NOVEL NA 83 83 1 ENSG00000259890.1 DNM1P50 chr15 30567822 30571089 - unprocessed_pseudogene KNOWN OTTHUMG00000175652.1 3268 508 3 ENSG00000260128.5 ULK4P2 chr15 30572738 30600647 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000175653.1 27910 1563 22 ENSG00000207430.1 U8 chr15 30581184 30581316 + snoRNA NOVEL NA 133 133 1 ENSG00000261794.1 GOLGA8H chr15 30604126 30614561 + protein_coding KNOWN OTTHUMG00000175654.1 10436 1899 19 ENSG00000270016.1 RP11-932O9.8 chr15 30607695 30608193 - antisense NOVEL OTTHUMG00000183911.1 499 499 1 ENSG00000277467.1 Metazoa_SRP chr15 30612724 30612960 + misc_RNA NOVEL NA 237 237 1 ENSG00000221358.1 AC026150.1 chr15 30613871 30613953 + miRNA NOVEL NA 83 83 1 ENSG00000150732.8 RP11-134C1.1 chr1 188067298 188067525 - processed_pseudogene KNOWN OTTHUMG00000047813.2 228 228 1 ENSG00000269930.1 RP11-932O9.9 chr15 30616958 30617749 + lincRNA NOVEL OTTHUMG00000183912.1 792 792 1 ENSG00000247728.2 RP11-932O9.7 chr15 30616998 30625773 - antisense NOVEL OTTHUMG00000175655.1 8776 970 2 ENSG00000187951.9 ARHGAP11B chr15 30624494 30772993 + protein_coding KNOWN OTTHUMG00000175656.2 148500 9184 63 ENSG00000269974.1 RP11-932O9.10 chr15 30648797 30649529 + lincRNA NOVEL OTTHUMG00000183913.1 733 733 1 ENSG00000206846.1 Y_RNA chr15 30673750 30673843 + misc_RNA NOVEL NA 94 94 1 ENSG00000280998.1 AC091057.1 chr15 30700663 30700747 + miRNA NOVEL NA 85 85 1 ENSG00000103832.10 GOLGA8UP chr15 30791573 30801859 + unprocessed_pseudogene KNOWN OTTHUMG00000165688.2 10287 1755 19 ENSG00000278696.1 Metazoa_SRP chr15 30800160 30800396 + misc_RNA NOVEL NA 237 237 1 ENSG00000221379.1 AC004460.1 chr15 30801306 30801388 + miRNA NOVEL NA 83 83 1 ENSG00000259845.1 HERC2P10 chr15 30815271 30844153 + unprocessed_pseudogene KNOWN OTTHUMG00000175658.1 28883 2393 16 ENSG00000222240.1 RN7SKP156 chr1 188155839 188156180 - misc_RNA KNOWN NA 342 342 1 ENSG00000260382.1 RP11-540B6.2 chr15 30882267 30883231 - processed_pseudogene KNOWN OTTHUMG00000175659.1 965 965 1 ENSG00000261628.1 RP11-540B6.3 chr15 30899480 30900327 + unprocessed_pseudogene KNOWN OTTHUMG00000175660.1 848 330 2 ENSG00000198690.8 FAN1 chr15 30903852 30943108 + protein_coding KNOWN OTTHUMG00000175661.1 39257 6194 55 ENSG00000270015.1 RP11-540B6.6 chr15 30926514 30928407 + sense_intronic NOVEL OTTHUMG00000183915.1 1894 1894 1 ENSG00000166912.15 MTMR10 chr15 30938941 30991607 - protein_coding KNOWN OTTHUMG00000175662.1 52667 8817 106 ENSG00000212526.1 RNU6-466P chr15 30956248 30956350 - snRNA KNOWN NA 103 103 1 ENSG00000134160.12 TRPM1 chr15 31001061 31161273 - protein_coding KNOWN OTTHUMG00000129267.4 160213 7454 188 ENSG00000259720.1 RP11-348B17.1 chr15 31002013 31042302 + antisense NOVEL OTTHUMG00000172221.1 40290 658 7 ENSG00000207702.1 MIR211 chr15 31065032 31065141 - miRNA KNOWN NA 110 110 1 ENSG00000259448.2 RP11-16E12.1 chr15 31216020 31224445 + lincRNA NOVEL OTTHUMG00000172222.2 8426 1901 4 ENSG00000261182.1 RP11-201A3.1 chr1 188218400 188220676 + lincRNA NOVEL OTTHUMG00000176310.1 2277 2277 1 ENSG00000259772.5 RP11-16E12.2 chr15 31221999 31230838 - lincRNA NOVEL OTTHUMG00000172223.2 8840 1563 17 ENSG00000169926.8 KLF13 chr15 31326855 31435665 + protein_coding KNOWN OTTHUMG00000172224.2 108811 9409 19 ENSG00000259179.1 UBE2CP4 chr15 31420128 31420662 + processed_pseudogene KNOWN OTTHUMG00000129269.2 535 535 1 ENSG00000259696.2 RP11-126F18.2 chr15 31453201 31454139 - processed_pseudogene KNOWN OTTHUMG00000172225.2 939 939 1 ENSG00000169918.8 OTUD7A chr15 31475398 31870789 - protein_coding KNOWN OTTHUMG00000129275.3 395392 14331 31 ENSG00000280902.1 AC026951.1 chr15 31704945 31705029 - miRNA NOVEL NA 85 85 1 ENSG00000259358.1 RP11-456J20.1 chr15 31765743 31768201 - processed_pseudogene KNOWN OTTHUMG00000172235.1 2459 2459 1 ENSG00000277500.1 RP11-456J20.2 chr15 31787494 31787734 + unprocessed_pseudogene KNOWN OTTHUMG00000187858.1 241 241 1 ENSG00000206849.1 SNORA18 chr15 31928303 31928434 + snoRNA NOVEL NA 132 132 1 ENSG00000175344.15 CHRNA7 chr15 32030488 32172521 + protein_coding KNOWN OTTHUMG00000129285.2 142034 5766 28 ENSG00000224278.1 RP11-405P11.1 chr1 188242139 188242678 - processed_pseudogene KNOWN OTTHUMG00000035629.1 540 540 1 ENSG00000201084.1 Y_RNA chr15 32175247 32175351 - misc_RNA NOVEL NA 105 105 1 ENSG00000279912.1 RP11-624A21.1 chr15 32182551 32186475 + TEC KNOWN OTTHUMG00000176883.1 3925 3925 1 ENSG00000271078.1 RP13-395E19.4 chr15 32250302 32256125 - processed_pseudogene KNOWN OTTHUMG00000184825.1 5824 2059 10 ENSG00000207257.1 RNU6-18P chr15 32284152 32284258 + snRNA KNOWN NA 107 107 1 ENSG00000260211.2 RP13-395E19.2 chr15 32313126 32315654 - processed_pseudogene KNOWN OTTHUMG00000175392.2 2529 2529 1 ENSG00000260642.1 RP11-717I24.1 chr15 32359538 32367784 + lincRNA NOVEL OTTHUMG00000175393.1 8247 251 3 ENSG00000261491.1 DNM1P31 chr15 32384937 32387484 + unprocessed_pseudogene KNOWN OTTHUMG00000175394.1 2548 696 3 ENSG00000249931.4 GOLGA8K chr15 32392782 32403292 - protein_coding KNOWN OTTHUMG00000175395.3 10511 3231 20 ENSG00000221444.1 AC139426.1 chr15 32393390 32393472 - miRNA NOVEL NA 83 83 1 ENSG00000275776.1 Metazoa_SRP chr15 32394365 32394613 - misc_RNA NOVEL NA 249 249 1 ENSG00000225006.1 RP11-669M2.1 chr1 188508538 188536465 + lincRNA NOVEL OTTHUMG00000035627.1 27928 746 4 ENSG00000215304.3 RP13-395E19.3 chr15 32398956 32435233 - processed_transcript NOVEL OTTHUMG00000175396.1 36278 1097 13 ENSG00000261279.4 ULK4P1 chr15 32406597 32434992 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000162940.2 28396 1687 17 ENSG00000206987.1 U8 chr15 32426288 32426420 - snoRNA NOVEL NA 133 133 1 ENSG00000261708.1 DNM1P32 chr15 32436503 32439767 + unprocessed_pseudogene KNOWN OTTHUMG00000175397.1 3265 544 3 ENSG00000206127.9 GOLGA8O chr15 32445106 32455634 - protein_coding KNOWN OTTHUMG00000162878.3 10529 2166 26 ENSG00000221318.1 AC135983.1 chr15 32445715 32445797 - miRNA NOVEL NA 83 83 1 ENSG00000274076.1 Metazoa_SRP chr15 32446674 32446964 - misc_RNA NOVEL NA 291 291 1 ENSG00000270789.1 RP11-632K20.8 chr15 32461666 32461809 - processed_pseudogene KNOWN OTTHUMG00000184828.1 144 144 1 ENSG00000261375.1 RP11-632K20.6 chr15 32489267 32491586 - unprocessed_pseudogene KNOWN OTTHUMG00000175398.1 2320 1262 4 ENSG00000254912.2 RP11-632K20.2 chr15 32494003 32500346 - unprocessed_pseudogene KNOWN OTTHUMG00000166829.2 6344 1226 5 ENSG00000235083.1 RP11-669M2.2 chr1 188671353 188671759 + processed_pseudogene KNOWN OTTHUMG00000035628.1 407 407 1 ENSG00000223509.7 RP11-632K20.7 chr15 32519848 32536926 - transcribed_processed_pseudogene KNOWN OTTHUMG00000175399.3 17079 2846 20 ENSG00000261064.1 RP11-1000B6.3 chr15 32536047 32587613 + lincRNA NOVEL OTTHUMG00000175400.1 51567 909 5 ENSG00000276724.1 RP11-1000B6.7 chr15 32583612 32584312 + sense_intronic NOVEL OTTHUMG00000186803.1 701 701 1 ENSG00000262728.4 RP11-1000B6.8 chr15 32586105 32615158 - antisense NOVEL OTTHUMG00000186804.1 29054 1232 7 ENSG00000232653.7 GOLGA8N chr15 32593456 32607310 + protein_coding KNOWN OTTHUMG00000175401.3 13855 7602 54 ENSG00000277464.1 Metazoa_SRP chr15 32602121 32602411 + misc_RNA NOVEL NA 291 291 1 ENSG00000221405.1 AC123768.1 chr15 32603287 32603369 + miRNA NOVEL NA 83 83 1 ENSG00000244952.2 RP11-1000B6.5 chr15 32613733 32615111 + lincRNA NOVEL OTTHUMG00000175402.1 1379 732 3 ENSG00000198826.9 ARHGAP11A chr15 32615144 32639949 + protein_coding KNOWN OTTHUMG00000129289.2 24806 6428 71 ENSG00000166922.7 SCG5 chr15 32641676 32697098 + protein_coding KNOWN OTTHUMG00000159447.2 55423 2196 40 ENSG00000276171.1 AC114498.1 chr1 630896 630958 + miRNA NOVEL NA 63 63 1 ENSG00000048707.12 VPS13D chr1 12230067 12512047 + protein_coding KNOWN OTTHUMG00000013155.6 281981 20023 279 ENSG00000231022.1 RPS3AP9 chr1 188694320 188695111 + processed_pseudogene KNOWN OTTHUMG00000035541.1 792 792 1 ENSG00000241818.1 RP11-1000B6.2 chr15 32656084 32673065 - antisense NOVEL OTTHUMG00000159446.1 16982 750 7 ENSG00000259721.1 RP11-758N13.1 chr15 32717270 32719007 - lincRNA NOVEL OTTHUMG00000172200.1 1738 1738 3 ENSG00000166923.9 GREM1 chr15 32717974 32745107 + protein_coding KNOWN OTTHUMG00000129319.4 27134 14606 8 ENSG00000248905.7 FMN1 chr15 32765545 33194733 - protein_coding KNOWN OTTHUMG00000172201.3 429189 20084 100 ENSG00000259392.2 RP11-758N13.3 chr15 32836983 32837326 - transcribed_processed_pseudogene KNOWN OTTHUMG00000172232.2 344 344 1 ENSG00000212415.1 SNORD77 chr15 32970727 32970791 + snoRNA NOVEL NA 65 65 1 ENSG00000259686.1 HNRNPA1P71 chr15 33012119 33013068 + processed_pseudogene KNOWN OTTHUMG00000172233.1 950 950 1 ENSG00000279958.1 RP11-12O16.1 chr15 33105758 33106236 - TEC KNOWN OTTHUMG00000172916.1 479 479 1 ENSG00000215296.8 TMCO5B chr15 33235552 33247621 - unitary_pseudogene KNOWN OTTHUMG00000167569.1 12070 3036 29 ENSG00000259446.4 RP11-489D6.2 chr15 33303657 33310659 - antisense NOVEL OTTHUMG00000172252.1 7003 561 6 ENSG00000237283.1 RP11-316I3.1 chr1 188705623 188710880 - lincRNA PUTATIVE OTTHUMG00000035544.1 5258 733 2 ENSG00000198838.10 RYR3 chr15 33310962 33866102 + protein_coding KNOWN OTTHUMG00000172253.2 555141 16054 335 ENSG00000200008.1 Y_RNA chr15 33722492 33722596 + misc_RNA NOVEL NA 105 105 1 ENSG00000276702.1 RP11-3D4.4 chr15 33850538 33851178 - antisense NOVEL OTTHUMG00000186805.1 641 641 1 ENSG00000259408.2 RP11-3D4.3 chr15 33851785 33856809 - antisense NOVEL OTTHUMG00000172337.2 5025 964 3 ENSG00000259287.2 RP11-3D4.2 chr15 33858602 33864825 - antisense NOVEL OTTHUMG00000172338.2 6224 562 2 ENSG00000169857.6 AVEN chr15 33866227 34039176 - protein_coding KNOWN OTTHUMG00000129371.2 172950 1808 15 ENSG00000184984.9 CHRM5 chr15 33968720 34067457 + protein_coding KNOWN OTTHUMG00000129369.3 98738 5817 7 ENSG00000278472.1 RP11-74D7.3 chr15 33972059 33972515 - sense_intronic NOVEL OTTHUMG00000186806.1 457 457 1 ENSG00000259505.1 RP11-74D7.1 chr15 33990686 33992048 + processed_pseudogene KNOWN OTTHUMG00000172254.1 1363 1203 2 ENSG00000134153.8 EMC7 chr15 34084017 34101948 - protein_coding KNOWN OTTHUMG00000129367.3 17932 1538 16 ENSG00000238054.1 RP11-316I3.2 chr1 188869477 188887434 - lincRNA PUTATIVE OTTHUMG00000035545.1 17958 466 2 ENSG00000243094.1 RP11-1084A12.1 chr15 34085911 34086314 - processed_pseudogene KNOWN OTTHUMG00000157874.1 404 404 1 ENSG00000182405.5 PGBD4 chr15 34102073 34108684 + protein_coding KNOWN OTTHUMG00000129370.3 6612 6612 1 ENSG00000134152.9 KATNBL1 chr15 34140674 34210096 - protein_coding KNOWN OTTHUMG00000129368.2 69423 7311 83 ENSG00000128463.11 EMC4 chr15 34224999 34230156 + protein_coding KNOWN OTTHUMG00000129411.3 5158 4459 44 ENSG00000140199.10 SLC12A6 chr15 34229996 34338060 - protein_coding KNOWN OTTHUMG00000129441.3 108065 10056 333 ENSG00000259468.1 RP11-1084A12.2 chr15 34255286 34257832 + antisense NOVEL OTTHUMG00000172339.1 2547 387 2 ENSG00000207091.1 Y_RNA chr15 34314728 34314828 + misc_RNA NOVEL NA 101 101 1 ENSG00000182117.5 NOP10 chr15 34341713 34343177 - protein_coding KNOWN OTTHUMG00000129440.3 1465 554 4 ENSG00000184507.14 NUTM1 chr15 34343315 34357737 + protein_coding KNOWN OTTHUMG00000172348.1 14423 4196 30 ENSG00000176454.12 LPCAT4 chr15 34358618 34367278 - protein_coding KNOWN OTTHUMG00000172349.3 8661 4799 55 ENSG00000226486.1 LINC01035 chr1 188905688 189037262 + lincRNA NOVEL OTTHUMG00000035542.1 131575 784 2 ENSG00000259904.1 RP11-602M11.3 chr15 34373541 34374603 - processed_pseudogene KNOWN OTTHUMG00000173385.1 1063 1063 1 ENSG00000266205.1 AC025678.1 chr15 34373789 34373871 - miRNA NOVEL NA 83 83 1 ENSG00000175265.16 GOLGA8A chr15 34379068 34437466 - protein_coding KNOWN OTTHUMG00000129447.5 58399 6750 62 ENSG00000221649.1 MIR1233-1 chr15 34382069 34382150 - miRNA KNOWN NA 82 82 1 ENSG00000260639.1 RP11-602M11.4 chr15 34394594 34394931 + processed_pseudogene KNOWN OTTHUMG00000173386.1 338 338 1 ENSG00000261081.1 RP11-1H8.1 chr15 34409625 34410594 + unprocessed_pseudogene KNOWN OTTHUMG00000173387.1 970 970 1 ENSG00000279092.1 RP11-1H8.5 chr15 34415450 34420273 - TEC KNOWN OTTHUMG00000186808.1 4824 4824 1 ENSG00000259917.1 HNRNPLP2 chr15 34489002 34490571 - unprocessed_pseudogene KNOWN OTTHUMG00000173388.1 1570 1570 1 ENSG00000261559.1 FSCN1P1 chr15 34494420 34495900 + processed_pseudogene KNOWN OTTHUMG00000173389.1 1481 1481 1 ENSG00000278582.1 RP11-1H8.6 chr15 34520608 34521791 + unprocessed_pseudogene KNOWN OTTHUMG00000188120.1 1184 448 2 ENSG00000271036.1 CLPTM1LP1 chr1 189035961 189036444 - processed_pseudogene KNOWN OTTHUMG00000184460.1 484 484 1 ENSG00000215252.10 GOLGA8B chr15 34525207 34588503 - protein_coding KNOWN OTTHUMG00000129549.3 63297 7670 114 ENSG00000221065.1 MIR1233-2 chr15 34528290 34528371 - miRNA KNOWN NA 82 82 1 ENSG00000259892.1 RP11-1H8.4 chr15 34555870 34556820 + unprocessed_pseudogene KNOWN OTTHUMG00000173390.1 951 951 1 ENSG00000252425.1 SNORA18 chr15 34597458 34597558 - snoRNA NOVEL NA 101 101 1 ENSG00000261304.1 CTD-2125J1.1 chr15 34651135 34655764 - lincRNA NOVEL OTTHUMG00000173391.1 4630 487 4 ENSG00000159248.4 GJD2 chr15 34751032 34754965 - protein_coding KNOWN OTTHUMG00000129674.2 3934 2889 2 ENSG00000250007.5 RP11-814P5.1 chr15 34755084 34812923 + antisense NOVEL OTTHUMG00000172256.1 57840 3094 6 ENSG00000159251.6 ACTC1 chr15 34788096 34796139 - protein_coding KNOWN OTTHUMG00000129675.3 8044 4639 13 ENSG00000259751.1 RP11-83J16.3 chr15 34849137 34850395 - processed_pseudogene KNOWN OTTHUMG00000172289.1 1259 1259 1 ENSG00000021776.9 AQR chr15 34851782 34969839 - protein_coding KNOWN OTTHUMG00000172257.3 118058 13528 85 ENSG00000226196.1 GAPDHP75 chr1 189132350 189133292 - processed_pseudogene KNOWN OTTHUMG00000035543.1 943 943 1 ENSG00000231409.3 RP11-83J16.1 chr15 34943080 34943394 + processed_pseudogene KNOWN OTTHUMG00000157892.1 315 315 1 ENSG00000198146.4 ZNF770 chr15 34978341 34988287 - protein_coding KNOWN OTTHUMG00000129689.2 9947 5439 5 ENSG00000279364.1 RP11-463I20.1 chr15 34978351 34980084 + TEC KNOWN OTTHUMG00000172290.1 1734 1734 1 ENSG00000259181.1 RP11-463I20.3 chr15 34993646 35003221 + lincRNA NOVEL OTTHUMG00000172303.1 9576 473 2 ENSG00000280396.1 RP11-463I20.4 chr15 34999902 35000270 + TEC KNOWN OTTHUMG00000172743.1 369 369 1 ENSG00000259587.2 RP11-463I20.2 chr15 35008469 35011191 + lincRNA NOVEL OTTHUMG00000172304.2 2723 477 2 ENSG00000259665.1 RP11-323I15.3 chr15 35081144 35081513 + processed_pseudogene KNOWN OTTHUMG00000172305.1 370 370 1 ENSG00000255192.5 NANOGP8 chr15 35084193 35085110 - protein_coding PUTATIVE OTTHUMG00000166041.4 918 918 3 ENSG00000259397.3 RP11-323I15.2 chr15 35092481 35093210 + processed_pseudogene KNOWN OTTHUMG00000172291.2 730 730 1 ENSG00000281647.1 AC021231.1 chr15 35097680 35097814 - miRNA NOVEL NA 135 135 1 ENSG00000252553.1 RNA5SP73 chr1 189666149 189666256 - rRNA KNOWN NA 108 108 1 ENSG00000259336.1 RP11-323I15.5 chr15 35099022 35169698 - lincRNA NOVEL OTTHUMG00000172320.1 70677 1342 2 ENSG00000259592.1 PRELID1P4 chr15 35121573 35122084 - processed_pseudogene KNOWN OTTHUMG00000172306.1 512 512 1 ENSG00000259516.2 ANP32AP1 chr15 35181799 35238197 + transcribed_processed_pseudogene KNOWN OTTHUMG00000172321.2 56399 1074 3 ENSG00000134146.10 DPH6 chr15 35217345 35546193 - protein_coding KNOWN OTTHUMG00000129759.5 328849 9345 45 ENSG00000259710.1 NUTF2P6 chr15 35282596 35282980 + processed_pseudogene KNOWN OTTHUMG00000172343.1 385 385 1 ENSG00000259585.2 RBM17P4 chr15 35298249 35299440 - processed_pseudogene KNOWN OTTHUMG00000172344.2 1192 1192 1 ENSG00000265102.1 MIR3942 chr15 35372256 35372364 - miRNA KNOWN NA 109 109 1 ENSG00000259688.1 RP11-139F4.2 chr15 35396221 35396444 + processed_pseudogene KNOWN OTTHUMG00000172345.1 224 224 1 ENSG00000259411.1 HNRNPA1P45 chr15 35400691 35401768 + processed_pseudogene KNOWN OTTHUMG00000172346.1 1078 1078 1 ENSG00000248079.2 DPH6-AS1 chr15 35546195 35859001 + lincRNA NOVEL OTTHUMG00000172347.1 312807 1531 8 ENSG00000232212.1 RP11-398M15.1 chr1 189775465 189814918 + lincRNA NOVEL OTTHUMG00000035526.1 39454 451 4 ENSG00000259217.1 RP11-702M1.2 chr15 35774800 35774989 + processed_pseudogene KNOWN OTTHUMG00000172353.1 190 190 1 ENSG00000265098.2 AC100828.1 chr15 35926843 35926953 + miRNA NOVEL NA 111 111 1 ENSG00000259639.4 RP11-184D12.1 chr15 35939167 36252257 - lincRNA NOVEL OTTHUMG00000172355.1 313091 1294 8 ENSG00000259245.1 RP11-684B21.1 chr15 36046082 36049529 + lincRNA NOVEL OTTHUMG00000172356.1 3448 632 2 ENSG00000259395.1 RP11-475A13.2 chr15 36341739 36344166 + lincRNA NOVEL OTTHUMG00000172357.1 2428 2428 1 ENSG00000259737.5 RP11-475A13.1 chr15 36438972 36471016 - lincRNA NOVEL OTTHUMG00000172358.2 32045 3666 9 ENSG00000270500.1 COX6CP4 chr15 36571985 36572212 + processed_pseudogene KNOWN OTTHUMG00000184862.1 228 228 1 ENSG00000186073.10 C15orf41 chr15 36579611 36810248 + protein_coding KNOWN OTTHUMG00000172659.1 230638 9009 119 ENSG00000261635.2 RP11-618N24.1 chr15 36613474 36614198 + processed_pseudogene KNOWN OTTHUMG00000172660.2 725 725 1 ENSG00000261315.2 LARP4P chr15 36617089 36619265 + transcribed_processed_pseudogene KNOWN OTTHUMG00000172661.2 2177 2177 1 ENSG00000238270.1 RP11-445J9.1 chr1 189868001 189868528 - lincRNA NOVEL OTTHUMG00000035527.2 528 414 2 ENSG00000260582.1 TPST2P1 chr15 36626674 36627775 - processed_pseudogene KNOWN OTTHUMG00000172662.1 1102 1102 1 ENSG00000261191.1 RP11-16L14.2 chr15 36641186 36669097 - antisense NOVEL OTTHUMG00000172663.1 27912 565 3 ENSG00000223518.5 CSNK1A1P1 chr15 36798596 36818459 - transcribed_processed_pseudogene KNOWN OTTHUMG00000172664.3 19864 2629 7 ENSG00000212511.2 U3 chr15 36852640 36852859 + snoRNA NOVEL NA 220 220 1 ENSG00000259280.1 RP11-122D10.1 chr15 36876379 36887035 - processed_transcript NOVEL OTTHUMG00000172258.3 10657 1390 9 ENSG00000134138.18 MEIS2 chr15 36889204 37101299 - protein_coding KNOWN OTTHUMG00000129781.5 212096 10798 208 ENSG00000277202.1 MIR8063 chr15 36972821 36972901 - miRNA KNOWN NA 81 81 1 ENSG00000206676.1 Y_RNA chr15 37050828 37050930 - misc_RNA NOVEL NA 103 103 1 ENSG00000259460.1 RP11-128A17.1 chr15 37099339 37100173 + antisense NOVEL OTTHUMG00000172260.1 835 464 2 ENSG00000274444.1 RP11-128A17.2 chr15 37109587 37109984 + lincRNA NOVEL OTTHUMG00000186810.1 398 398 1 ENSG00000230987.2 RP11-113I24.1 chr1 189989570 189993097 - processed_pseudogene KNOWN OTTHUMG00000035525.2 3528 3528 1 ENSG00000274216.1 Metazoa_SRP chr15 37216617 37216898 + misc_RNA NOVEL NA 282 282 1 ENSG00000270304.1 RP11-597G23.1 chr15 37253879 37254952 + processed_pseudogene KNOWN OTTHUMG00000184866.1 1074 1074 1 ENSG00000259434.1 RP11-720L8.1 chr15 37365027 37490808 - lincRNA NOVEL OTTHUMG00000172363.1 125782 463 4 ENSG00000243122.1 RP11-25H11.1 chr15 37490691 37491103 + processed_pseudogene KNOWN OTTHUMG00000157896.1 413 413 1 ENSG00000166069.12 TMCO5A chr15 37921939 37967724 + protein_coding KNOWN OTTHUMG00000129787.2 45786 5313 68 ENSG00000259225.5 RP11-1008C21.1 chr15 37984766 38062340 + lincRNA NOVEL OTTHUMG00000172364.3 77575 2448 13 ENSG00000236914.3 RP11-1008C21.2 chr15 38069481 38072959 - lincRNA NOVEL OTTHUMG00000172374.1 3479 1793 6 ENSG00000259380.4 RP11-346D14.1 chr15 38139595 38226887 - lincRNA NOVEL OTTHUMG00000172384.1 87293 2982 7 ENSG00000166068.11 SPRED1 chr15 38252326 38357249 + protein_coding KNOWN OTTHUMG00000172377.2 104924 8260 18 ENSG00000171262.10 FAM98B chr15 38454127 38487710 + protein_coding KNOWN OTTHUMG00000129831.2 33584 6851 22 ENSG00000280999.1 AC243836.1 chr1 12481829 12481928 + miRNA NOVEL NA 100 100 1 ENSG00000162670.9 BRINP3 chr1 190097662 190477629 - protein_coding KNOWN OTTHUMG00000035533.3 379968 3406 12 ENSG00000259192.1 AC109631.1 chr15 38458760 38459540 - processed_pseudogene KNOWN OTTHUMG00000172378.1 781 781 1 ENSG00000172575.10 RASGRP1 chr15 38488103 38565575 - protein_coding KNOWN OTTHUMG00000172379.1 77473 6097 150 ENSG00000259326.1 RP11-102L12.2 chr15 38502853 38504981 + antisense NOVEL OTTHUMG00000172380.1 2129 2129 1 ENSG00000259598.1 RP11-275I4.1 chr15 38524070 38534655 + antisense NOVEL OTTHUMG00000172381.1 10586 553 3 ENSG00000281795.1 Y_RNA chr15 38542243 38542343 + misc_RNA NOVEL NA 101 101 1 ENSG00000259747.1 RP11-275I4.2 chr15 38671847 38689191 + lincRNA NOVEL OTTHUMG00000172382.1 17345 815 6 ENSG00000175779.1 C15orf53 chr15 38696598 38700038 + protein_coding KNOWN OTTHUMG00000129841.1 3441 2043 2 ENSG00000259731.2 RP11-326N17.1 chr15 38756552 38759413 - lincRNA NOVEL OTTHUMG00000172383.2 2862 823 4 ENSG00000274281.1 RP11-326N17.2 chr15 38851306 38853432 - lincRNA NOVEL OTTHUMG00000186811.1 2127 2127 1 ENSG00000259345.4 RP11-624L4.1 chr15 38865322 39427195 - lincRNA NOVEL OTTHUMG00000172466.2 561874 3242 25 ENSG00000225811.1 RP11-547I7.1 chr1 190264898 190362270 + antisense NOVEL OTTHUMG00000035534.1 97373 602 5 ENSG00000259278.1 RP11-62C7.2 chr15 39019233 39024918 + lincRNA NOVEL OTTHUMG00000172390.1 5686 574 3 ENSG00000259423.2 RP11-265N7.2 chr15 39167739 39180048 + lincRNA NOVEL OTTHUMG00000172478.2 12310 1226 10 ENSG00000259450.1 RP11-265N7.1 chr15 39188438 39194309 - lincRNA NOVEL OTTHUMG00000172465.1 5872 1961 2 ENSG00000175746.6 C15orf54 chr15 39250684 39254845 + lincRNA KNOWN OTTHUMG00000129843.2 4162 3078 4 ENSG00000259447.1 RP11-462P6.1 chr15 39300418 39310782 - lincRNA NOVEL OTTHUMG00000172479.1 10365 1112 5 ENSG00000259269.1 RP11-624L4.2 chr15 39472703 39481206 + lincRNA NOVEL OTTHUMG00000172480.1 8504 1334 6 ENSG00000259390.2 RP11-27M9.1 chr15 39512404 39519854 - lincRNA NOVEL OTTHUMG00000172455.3 7451 552 7 ENSG00000137801.10 THBS1 chr15 39581079 39599466 + protein_coding KNOWN OTTHUMG00000133665.2 18388 9158 41 ENSG00000276107.1 CTD-2033D15.2 chr15 39586561 39587293 + sense_intronic NOVEL OTTHUMG00000186812.1 733 733 1 ENSG00000278621.1 CTD-2033D15.3 chr15 39588357 39588882 - antisense NOVEL OTTHUMG00000186813.1 526 526 1 ENSG00000237457.5 LINC01351 chr1 190478551 190480735 + lincRNA NOVEL OTTHUMG00000035535.1 2185 607 4 ENSG00000259279.1 CTD-2033D15.1 chr15 39593580 39594231 - antisense NOVEL OTTHUMG00000172463.1 652 281 2 ENSG00000150667.6 FSIP1 chr15 39600031 39782830 - protein_coding KNOWN OTTHUMG00000172456.1 182800 2951 17 ENSG00000259580.1 RP11-37C7.1 chr15 39770559 39801333 - processed_transcript NOVEL OTTHUMG00000172457.1 30775 318 3 ENSG00000261136.1 RP11-37C7.3 chr15 39782571 39785617 + antisense NOVEL OTTHUMG00000173059.1 3047 3047 1 ENSG00000166073.7 GPR176 chr15 39799023 39920892 - protein_coding KNOWN OTTHUMG00000129873.3 121870 5128 19 ENSG00000259432.1 RP11-37C7.2 chr15 39813223 39815429 - sense_intronic NOVEL OTTHUMG00000172464.1 2207 567 3 ENSG00000246863.2 RP11-325N19.3 chr15 39921042 39925880 + lincRNA NOVEL OTTHUMG00000172417.1 4839 4839 3 ENSG00000200305.1 Y_RNA chr15 39922782 39922886 - misc_RNA NOVEL NA 105 105 1 ENSG00000128829.10 EIF2AK4 chr15 39934146 40035591 + protein_coding KNOWN OTTHUMG00000172403.2 101446 11957 140 ENSG00000259389.2 H3F3AP1 chr15 39951375 39951708 - processed_pseudogene KNOWN OTTHUMG00000172418.2 334 334 1 ENSG00000241505.1 RP11-161I10.1 chr1 190480379 190494297 + lincRNA NOVEL OTTHUMG00000040635.1 13919 506 2 ENSG00000140319.9 SRP14 chr15 40035739 40039188 - protein_coding KNOWN OTTHUMG00000172391.2 3450 2005 35 ENSG00000248508.5 SRP14-AS1 chr15 40039311 40067290 + lincRNA NOVEL OTTHUMG00000172392.2 27980 2992 9 ENSG00000259584.1 RP11-521C20.2 chr15 40075204 40078704 - lincRNA NOVEL OTTHUMG00000172393.1 3501 864 2 ENSG00000275636.1 RP11-521C20.5 chr15 40078892 40079347 + lincRNA NOVEL OTTHUMG00000186814.1 456 456 1 ENSG00000104081.12 BMF chr15 40087890 40108892 - protein_coding KNOWN OTTHUMG00000129875.2 21003 5447 36 ENSG00000259409.1 RP11-521C20.3 chr15 40088832 40089386 + antisense NOVEL OTTHUMG00000172394.1 555 461 2 ENSG00000259239.1 RP11-521C20.1 chr15 40133768 40135214 - processed_pseudogene KNOWN OTTHUMG00000172395.1 1447 1447 1 ENSG00000156970.11 BUB1B chr15 40161023 40221136 + protein_coding KNOWN OTTHUMG00000129877.4 60114 4476 84 ENSG00000259288.4 PAK6 chr15 40217428 40277486 + protein_coding NOVEL OTTHUMG00000172398.1 60059 4181 59 ENSG00000273786.1 RP11-133K1.11 chr15 40226386 40227069 + sense_intronic NOVEL OTTHUMG00000186815.1 684 684 1 ENSG00000231175.1 RP11-463J7.2 chr1 190624890 190801658 + lincRNA NOVEL OTTHUMG00000035556.1 176769 2216 5 ENSG00000260648.3 RP11-133K1.7 chr15 40232082 40236109 + sense_intronic NOVEL OTTHUMG00000176889.3 4028 4028 1 ENSG00000137843.10 PAK6 chr15 40238759 40277487 + protein_coding KNOWN OTTHUMG00000129921.2 38729 6457 89 ENSG00000279537.1 RP11-133K1.8 chr15 40244925 40247366 + TEC KNOWN OTTHUMG00000176890.1 2442 2442 1 ENSG00000176753.5 C15orf56 chr15 40250664 40252969 - antisense KNOWN OTTHUMG00000172399.2 2306 2306 3 ENSG00000279409.1 RP11-133K1.9 chr15 40258501 40260370 + TEC KNOWN OTTHUMG00000176891.1 1870 1870 1 ENSG00000137841.10 PLCB2 chr15 40278176 40307935 - protein_coding KNOWN OTTHUMG00000172412.3 29760 7350 170 ENSG00000230778.1 ANKRD63 chr15 40281444 40282586 - protein_coding KNOWN OTTHUMG00000176892.1 1143 1143 1 ENSG00000273855.1 RP11-133K1.12 chr15 40285468 40285909 - sense_intronic NOVEL OTTHUMG00000186816.1 442 442 1 ENSG00000259307.1 PLCB2-AS1 chr15 40300670 40301820 + antisense NOVEL OTTHUMG00000172413.1 1151 568 2 ENSG00000244705.1 RP11-133K1.1 chr15 40312352 40313289 - processed_pseudogene KNOWN OTTHUMG00000157898.1 938 938 1 ENSG00000236025.1 RP11-463J7.1 chr1 190781787 190781995 + processed_pseudogene KNOWN OTTHUMG00000035555.1 209 209 1 ENSG00000259198.1 RP11-133K1.6 chr15 40312615 40316634 + lincRNA NOVEL OTTHUMG00000172414.1 4020 4020 1 ENSG00000259330.1 INAFM2 chr15 40325216 40326715 + antisense NOVEL OTTHUMG00000172415.1 1500 594 2 ENSG00000188549.11 C15orf52 chr15 40331452 40340967 - protein_coding KNOWN OTTHUMG00000129981.3 9516 7510 44 ENSG00000252714.1 RNA5SP392 chr15 40331537 40331648 - rRNA KNOWN NA 112 112 1 ENSG00000233041.7 PHGR1 chr15 40351033 40356434 + protein_coding KNOWN OTTHUMG00000172416.1 5402 941 6 ENSG00000140323.5 DISP2 chr15 40358235 40378639 + protein_coding KNOWN OTTHUMG00000129983.3 20405 12754 14 ENSG00000259368.1 RP11-64K12.4 chr15 40368925 40369640 - antisense NOVEL OTTHUMG00000172452.1 716 482 2 ENSG00000128944.12 KNSTRN chr15 40382721 40394246 + protein_coding KNOWN OTTHUMG00000172454.3 11526 3654 105 ENSG00000128928.7 IVD chr15 40405795 40435947 + protein_coding KNOWN OTTHUMG00000129984.7 30153 6533 82 ENSG00000140320.10 BAHD1 chr15 40439721 40468242 + protein_coding KNOWN OTTHUMG00000129982.2 28522 5196 22 ENSG00000238108.1 RP11-463J7.3 chr1 190797524 190797956 + processed_pseudogene KNOWN OTTHUMG00000035557.1 433 433 1 ENSG00000259364.1 RP11-64K12.9 chr15 40453444 40454639 - antisense NOVEL OTTHUMG00000172486.1 1196 584 3 ENSG00000259211.1 RP11-64K12.8 chr15 40464193 40466726 - antisense NOVEL OTTHUMG00000172487.1 2534 729 3 ENSG00000169105.7 CHST14 chr15 40470998 40474571 + protein_coding KNOWN OTTHUMG00000129985.3 3574 3574 3 ENSG00000244251.1 RP11-64K12.1 chr15 40480752 40481315 - processed_pseudogene KNOWN OTTHUMG00000157902.1 564 564 1 ENSG00000259536.4 RP11-111A22.1 chr15 40488041 40558019 + antisense NOVEL OTTHUMG00000172488.2 69979 2321 7 ENSG00000128891.14 C15orf57 chr15 40528683 40565057 - protein_coding KNOWN OTTHUMG00000129993.4 36375 8648 57 ENSG00000223313.1 RNU6-516P chr15 40529570 40529673 + snRNA KNOWN NA 104 104 1 ENSG00000166133.16 RPUSD2 chr15 40569300 40574943 + protein_coding KNOWN OTTHUMG00000130031.5 5644 2482 7 ENSG00000203573.4 Metazoa_SRP chr15 40585454 40585751 - misc_RNA NOVEL NA 298 298 1 ENSG00000137812.18 CASC5 chr15 40594020 40664342 + protein_coding KNOWN OTTHUMG00000166532.5 70323 10250 132 ENSG00000228020.2 HNRNPA1P46 chr1 191146025 191146961 - processed_pseudogene KNOWN OTTHUMG00000035529.2 937 937 1 ENSG00000280903.1 Metazoa_SRP chr15 40601754 40602005 - misc_RNA NOVEL NA 252 252 1 ENSG00000265814.2 RN7SL376P chr15 40615665 40615928 - misc_RNA KNOWN NA 264 264 1 ENSG00000259254.1 CTD-2339L15.3 chr15 40642933 40646857 + sense_intronic NOVEL OTTHUMG00000172532.1 3925 516 2 ENSG00000279084.1 FKSG66 chr15 40683694 40684068 - protein_coding KNOWN NA 375 375 1 ENSG00000245849.5 RAD51-AS1 chr15 40686724 40695107 - processed_transcript NOVEL OTTHUMG00000166119.3 8384 1696 8 ENSG00000051180.15 RAD51 chr15 40694774 40732339 + protein_coding KNOWN OTTHUMG00000130067.8 37566 3046 76 ENSG00000137824.14 RMDN3 chr15 40735884 40755851 - protein_coding KNOWN OTTHUMG00000130066.2 19968 5114 82 ENSG00000271236.1 SUMO2P15 chr15 40760597 40760874 + processed_pseudogene KNOWN OTTHUMG00000184878.1 278 278 1 ENSG00000137880.5 GCHFR chr15 40764020 40767710 + protein_coding KNOWN OTTHUMG00000130069.4 3691 1531 15 ENSG00000104129.8 DNAJC17 chr15 40765155 40807478 - protein_coding KNOWN OTTHUMG00000130065.4 42324 5634 85 ENSG00000261642.1 RP11-309H21.3 chr1 191151510 191154634 + lincRNA NOVEL OTTHUMG00000176313.1 3125 3125 1 ENSG00000188277.9 C15orf62 chr15 40770080 40772449 + protein_coding KNOWN OTTHUMG00000172536.1 2370 2370 1 ENSG00000166140.16 ZFYVE19 chr15 40807086 40815084 + protein_coding KNOWN OTTHUMG00000172537.3 7999 4779 118 ENSG00000276198.1 AC012476.1 chr15 40810282 40810373 - miRNA NOVEL NA 92 92 1 ENSG00000166143.8 PPP1R14D chr15 40815445 40828709 - protein_coding KNOWN OTTHUMG00000130064.3 13265 873 9 ENSG00000261183.4 RP11-532F12.5 chr15 40835808 40844387 - antisense NOVEL OTTHUMG00000172899.1 8580 1239 13 ENSG00000166145.13 SPINT1 chr15 40844018 40858207 + protein_coding KNOWN OTTHUMG00000130068.3 14190 3542 72 ENSG00000104140.6 RHOV chr15 40872214 40874289 - protein_coding KNOWN OTTHUMG00000130134.2 2076 1705 3 ENSG00000274798.1 CTD-2129N1.1 chr15 40874433 40874595 + lincRNA NOVEL OTTHUMG00000186818.1 163 163 1 ENSG00000264256.1 AC025166.1 chr15 40875313 40875410 + miRNA NOVEL NA 98 98 1 ENSG00000104142.9 VPS18 chr15 40894430 40903975 + protein_coding KNOWN OTTHUMG00000130135.2 9546 4049 14 ENSG00000271187.1 RP11-309H21.4 chr1 191179521 191179739 - processed_pseudogene KNOWN OTTHUMG00000184461.1 219 219 1 ENSG00000251161.3 RP11-540O11.1 chr15 40906811 40910337 + lincRNA NOVEL OTTHUMG00000172510.2 3527 1584 2 ENSG00000128917.6 DLL4 chr15 40929340 40939072 + protein_coding KNOWN OTTHUMG00000172511.2 9733 4753 18 ENSG00000259405.1 ISCA1P4 chr15 40948736 40948869 - processed_pseudogene KNOWN OTTHUMG00000172512.1 134 134 1 ENSG00000128965.10 CHAC1 chr15 40952962 40956519 + protein_coding KNOWN OTTHUMG00000130208.8 3558 2058 15 ENSG00000128908.14 INO80 chr15 40978880 41116354 - protein_coding KNOWN OTTHUMG00000130209.3 137475 7014 172 ENSG00000259617.1 RP11-540O11.6 chr15 40999274 41004865 + antisense NOVEL OTTHUMG00000172518.1 5592 500 2 ENSG00000259463.1 RP11-540O11.7 chr15 41011597 41013300 + antisense NOVEL OTTHUMG00000172519.1 1704 414 2 ENSG00000259521.1 RP11-540O11.4 chr15 41016807 41027893 + antisense NOVEL OTTHUMG00000172515.2 11087 712 6 ENSG00000280036.1 RP11-540O11.8 chr15 41016990 41018843 - sense_intronic NOVEL OTTHUMG00000172520.1 1854 1854 1 ENSG00000259547.1 CYCSP2 chr15 41108878 41109178 + processed_pseudogene KNOWN OTTHUMG00000172522.1 301 301 1 ENSG00000239149.1 SNORA59A chr1 12507246 12507397 + snoRNA KNOWN NA 152 152 1 ENSG00000233882.2 RP11-309H21.2 chr1 191221159 191228467 - lincRNA NOVEL OTTHUMG00000041127.2 7309 299 2 ENSG00000157021.9 FAM92A1P1 chr15 41163162 41164374 + unprocessed_pseudogene KNOWN OTTHUMG00000167701.3 1213 890 2 ENSG00000178997.10 EXD1 chr15 41182725 41230743 - protein_coding KNOWN OTTHUMG00000130232.3 48019 3661 33 ENSG00000240847.3 RN7SL497P chr15 41191965 41192265 - misc_RNA KNOWN NA 301 301 1 ENSG00000187446.10 CHP1 chr15 41230839 41281890 + protein_coding KNOWN OTTHUMG00000130233.6 51052 3950 54 ENSG00000247556.5 OIP5-AS1 chr15 41283990 41309737 + processed_transcript NOVEL OTTHUMG00000172547.3 25748 12673 39 ENSG00000104147.7 OIP5 chr15 41309268 41332621 - protein_coding KNOWN OTTHUMG00000130251.3 23354 1236 9 ENSG00000137804.11 NUSAP1 chr15 41332694 41381050 + protein_coding KNOWN OTTHUMG00000172588.2 48357 2875 102 ENSG00000259396.1 RP11-16O9.2 chr15 41343080 41344225 + sense_intronic NOVEL OTTHUMG00000172608.1 1146 476 2 ENSG00000137806.7 NDUFAF1 chr15 41387349 41402519 - protein_coding KNOWN OTTHUMG00000130340.3 15171 1790 16 ENSG00000137815.13 RTF1 chr15 41408408 41483563 + protein_coding KNOWN OTTHUMG00000133744.3 75156 5770 42 ENSG00000223344.1 RP11-541F9.1 chr1 191858707 191890229 - lincRNA NOVEL OTTHUMG00000041126.1 31523 780 4 ENSG00000200407.1 RNU6-1169P chr15 41448742 41448844 - snRNA KNOWN NA 103 103 1 ENSG00000137825.9 ITPKA chr15 41493393 41503551 + protein_coding KNOWN OTTHUMG00000130343.4 10159 2092 22 ENSG00000062524.14 LTK chr15 41503638 41513887 - protein_coding KNOWN OTTHUMG00000130339.2 10250 3490 95 ENSG00000103932.10 RPAP1 chr15 41517176 41544269 - protein_coding KNOWN OTTHUMG00000130342.2 27094 7046 107 ENSG00000259838.1 TCEB1P2 chr15 41557027 41557435 + unprocessed_pseudogene KNOWN OTTHUMG00000172717.1 409 332 2 ENSG00000092445.10 TYRO3 chr15 41557675 41583586 + protein_coding KNOWN OTTHUMG00000130341.5 25912 10945 67 ENSG00000260926.2 RP11-380D11.2 chr15 41609466 41612727 - lincRNA NOVEL OTTHUMG00000172718.2 3262 709 4 ENSG00000174197.15 MGA chr15 41621224 41773081 + protein_coding KNOWN OTTHUMG00000172719.2 151858 17651 132 ENSG00000207766.1 MIR626 chr15 41691585 41691678 + miRNA KNOWN NA 94 94 1 ENSG00000270702.1 RP11-107F6.4 chr15 41718370 41718672 - processed_pseudogene KNOWN OTTHUMG00000184832.1 303 303 1 ENSG00000228215.2 RP11-541F9.2 chr1 191875495 192011260 + lincRNA NOVEL OTTHUMG00000041131.2 135766 2051 6 ENSG00000260814.2 RP11-107F6.3 chr15 41770756 41772732 - lincRNA NOVEL OTTHUMG00000172724.2 1977 510 4 ENSG00000137802.12 MAPKBP1 chr15 41774434 41827855 + protein_coding KNOWN OTTHUMG00000160227.1 53422 10357 222 ENSG00000279937.1 AC073657.1 chr15 41781148 41784031 - protein_coding KNOWN NA 2884 183 2 ENSG00000250379.1 RP11-23P13.4 chr15 41825099 41827936 - antisense NOVEL OTTHUMG00000160228.1 2838 979 5 ENSG00000243789.9 JMJD7 chr15 41828085 41837581 + protein_coding KNOWN OTTHUMG00000156810.11 9497 1971 31 ENSG00000168970.19 JMJD7-PLA2G4B chr15 41828095 41848155 + protein_coding KNOWN OTTHUMG00000044442.6 20061 7862 123 ENSG00000243708.7 PLA2G4B chr15 41837775 41848147 + protein_coding KNOWN OTTHUMG00000156809.3 10373 4446 68 ENSG00000137877.9 SPTBN5 chr15 41848144 41894077 - protein_coding KNOWN OTTHUMG00000172720.2 45934 12338 70 ENSG00000200293.1 RNA5SP393 chr15 41851913 41852029 - rRNA KNOWN NA 117 117 1 ENSG00000264850.1 MIR4310 chr15 41866495 41866551 - miRNA KNOWN NA 57 57 1 ENSG00000150681.8 RGS18 chr1 192158457 192185815 + protein_coding KNOWN OTTHUMG00000035592.1 27359 2806 19 ENSG00000174171.5 RP11-23P13.6 chr15 41892793 41898575 + antisense NOVEL OTTHUMG00000172721.3 5783 3653 10 ENSG00000103966.8 EHD4 chr15 41895939 41972578 - protein_coding KNOWN OTTHUMG00000130370.3 76640 7879 17 ENSG00000278493.1 CTD-2382E5.6 chr15 41908204 41908714 - sense_intronic NOVEL OTTHUMG00000186822.1 511 511 1 ENSG00000259883.1 EHD4-AS1 chr15 41921417 41928883 + antisense NOVEL OTTHUMG00000172723.1 7467 771 4 ENSG00000246740.2 PLA2G4E-AS1 chr15 41972763 41999094 + antisense NOVEL OTTHUMG00000169509.1 26332 2499 4 ENSG00000188089.12 PLA2G4E chr15 41981582 42051190 - protein_coding KNOWN OTTHUMG00000130371.3 69609 5823 34 ENSG00000257797.1 CTD-2382E5.2 chr15 42006132 42010117 + antisense NOVEL OTTHUMG00000169510.1 3986 467 3 ENSG00000159337.6 PLA2G4D chr15 42067009 42094554 - protein_coding KNOWN OTTHUMG00000172587.2 27546 5138 29 ENSG00000168907.12 PLA2G4F chr15 42139034 42156636 - protein_coding KNOWN OTTHUMG00000172782.3 17603 6103 76 ENSG00000166887.14 VPS39 chr15 42158701 42208316 - protein_coding KNOWN OTTHUMG00000130467.3 49616 8354 92 ENSG00000226723.2 RP11-142L4.3 chr1 192246708 192247487 - processed_pseudogene KNOWN OTTHUMG00000035599.2 780 780 1 ENSG00000207712.1 MIR627 chr15 42199570 42199666 - miRNA KNOWN NA 97 97 1 ENSG00000261002.4 RP11-546B15.1 chr15 42208413 42226990 + antisense NOVEL OTTHUMG00000172819.1 18578 988 8 ENSG00000103978.14 TMEM87A chr15 42210452 42273663 - protein_coding KNOWN OTTHUMG00000172783.3 63212 5668 123 ENSG00000214013.8 GANC chr15 42273233 42356935 + protein_coding KNOWN OTTHUMG00000130487.5 83703 10954 93 ENSG00000260571.1 BNIP3P5 chr15 42313687 42314386 + processed_pseudogene KNOWN OTTHUMG00000172874.1 700 498 2 ENSG00000258461.4 RP11-164J13.1 chr15 42348103 42412317 + processed_transcript NOVEL OTTHUMG00000171261.1 64215 4670 98 ENSG00000092529.21 CAPN3 chr15 42359500 42412318 + protein_coding KNOWN OTTHUMG00000130619.6 52819 4671 221 ENSG00000103994.15 ZNF106 chr15 42412823 42491123 - protein_coding KNOWN OTTHUMG00000173244.5 78301 12208 112 ENSG00000201077.1 RNU6-188P chr15 42427591 42427697 - snRNA KNOWN NA 107 107 1 ENSG00000092531.8 SNAP23 chr15 42491233 42545356 + protein_coding KNOWN OTTHUMG00000130625.5 54124 5900 121 ENSG00000236792.1 RP11-142L4.2 chr1 192247505 192247947 + processed_pseudogene KNOWN OTTHUMG00000035597.1 443 443 1 ENSG00000261684.1 RP11-265N6.1 chr15 42531867 42532840 - antisense NOVEL OTTHUMG00000173437.1 974 846 2 ENSG00000180979.8 LRRC57 chr15 42537820 42548802 - protein_coding KNOWN OTTHUMG00000130679.3 10983 8114 28 ENSG00000137814.8 HAUS2 chr15 42548810 42569994 + protein_coding KNOWN OTTHUMG00000130678.3 21185 4323 52 ENSG00000261822.1 RP11-265N6.2 chr15 42567031 42569994 - antisense NOVEL OTTHUMG00000175436.1 2964 710 4 ENSG00000260490.2 RP11-265N6.3 chr15 42571927 42572433 + processed_pseudogene KNOWN OTTHUMG00000175798.2 507 507 1 ENSG00000159433.10 STARD9 chr15 42575659 42720981 + protein_coding KNOWN OTTHUMG00000175799.1 145323 20706 85 ENSG00000260282.1 EIF4EBP2P2 chr15 42581156 42581488 - processed_pseudogene KNOWN OTTHUMG00000175800.1 333 333 1 ENSG00000140326.11 CDAN1 chr15 42723559 42737126 - protein_coding KNOWN OTTHUMG00000175801.1 13568 5428 48 ENSG00000278769.1 CTD-2036P10.5 chr15 42724102 42724922 + antisense NOVEL OTTHUMG00000186823.2 821 821 1 ENSG00000274403.1 CTD-2036P10.6 chr15 42726583 42727211 + antisense NOVEL OTTHUMG00000186824.1 629 629 1 ENSG00000253148.1 RGS21 chr1 192316992 192367285 + protein_coding KNOWN OTTHUMG00000035594.2 50294 1794 5 ENSG00000128881.15 TTBK2 chr15 42738734 42920809 - protein_coding KNOWN OTTHUMG00000175802.3 182076 12917 75 ENSG00000246283.2 CTD-2036P10.3 chr15 42739118 42743202 + lincRNA NOVEL OTTHUMG00000175803.1 4085 2135 5 ENSG00000260799.1 KRT8P50 chr15 42800968 42802405 - processed_pseudogene KNOWN OTTHUMG00000176056.1 1438 1438 1 ENSG00000254793.1 FDPSP4 chr15 42939310 42940358 - processed_pseudogene KNOWN OTTHUMG00000166826.1 1049 1049 1 ENSG00000159459.10 UBR1 chr15 42942897 43106113 - protein_coding KNOWN OTTHUMG00000130702.4 163217 9928 123 ENSG00000273690.1 AC090514.1 chr15 43008838 43008922 + miRNA NOVEL NA 85 85 1 ENSG00000166947.10 EPB42 chr15 43106225 43221283 - protein_coding KNOWN OTTHUMG00000130701.2 115059 5574 85 ENSG00000281269.1 AC068724.2 chr15 43109928 43110018 + pseudogene NOVEL NA 91 87 2 ENSG00000205871.5 RPS3AP47 chr15 43115702 43116493 - processed_pseudogene KNOWN OTTHUMG00000157905.1 792 792 1 ENSG00000137842.5 TMEM62 chr15 43123279 43185146 + protein_coding KNOWN OTTHUMG00000176485.1 61868 4810 78 ENSG00000232498.1 RP5-1011O1.2 chr1 192517639 192567217 - antisense NOVEL OTTHUMG00000041135.1 49579 396 2 ENSG00000260928.2 SPCS2P1 chr15 43131008 43131686 + processed_pseudogene KNOWN OTTHUMG00000176486.2 679 679 1 ENSG00000281124.1 AC068724.1 chr15 43134212 43134284 - miRNA NOVEL NA 73 73 1 ENSG00000261687.1 RP11-473C18.3 chr15 43184079 43185141 - antisense NOVEL OTTHUMG00000176487.1 1063 532 2 ENSG00000166946.12 CCNDBP1 chr15 43185118 43197176 + protein_coding KNOWN OTTHUMG00000130703.3 12059 6654 113 ENSG00000104055.13 TGM5 chr15 43232595 43266857 - protein_coding KNOWN OTTHUMG00000176488.2 34263 3607 71 ENSG00000202211.1 Y_RNA chr15 43247680 43247781 + misc_RNA NOVEL NA 102 102 1 ENSG00000261679.2 ATP5HP1 chr15 43267904 43268388 - processed_pseudogene KNOWN OTTHUMG00000176546.2 485 485 1 ENSG00000159495.7 TGM7 chr15 43276280 43302255 - protein_coding KNOWN OTTHUMG00000176547.1 25976 2325 15 ENSG00000260406.1 RP11-402F9.3 chr15 43302096 43302772 + antisense NOVEL OTTHUMG00000176548.1 677 465 2 ENSG00000168806.7 LCMT2 chr15 43323649 43330605 - protein_coding KNOWN OTTHUMG00000130705.3 6957 6957 3 ENSG00000236069.1 RP5-1011O1.3 chr1 192529579 192538102 + lincRNA NOVEL OTTHUMG00000041136.1 8524 684 3 ENSG00000168803.13 ADAL chr15 43330674 43354555 + protein_coding KNOWN OTTHUMG00000176646.1 23882 5718 60 ENSG00000140265.11 ZSCAN29 chr15 43358172 43371025 - protein_coding KNOWN OTTHUMG00000130767.2 12854 6634 32 ENSG00000137822.11 TUBGCP4 chr15 43369221 43409771 + protein_coding KNOWN OTTHUMG00000176647.3 40551 11171 92 ENSG00000243871.3 RN7SL487P chr15 43391384 43391727 - misc_RNA KNOWN NA 344 344 1 ENSG00000067369.12 TP53BP1 chr15 43403061 43510728 - protein_coding KNOWN OTTHUMG00000059757.14 107668 12991 204 ENSG00000166963.11 MAP1A chr15 43510958 43531620 + protein_coding KNOWN OTTHUMG00000059756.5 20663 10629 13 ENSG00000275702.1 AC019011.1 chr15 43519409 43519489 + miRNA NOVEL NA 81 81 1 ENSG00000168781.20 PPIP5K1 chr15 43533462 43590253 - protein_coding KNOWN OTTHUMG00000059758.17 56792 8075 332 ENSG00000237289.8 CKMT1B chr15 43593054 43604901 + protein_coding KNOWN OTTHUMG00000059900.6 11848 3470 71 ENSG00000242866.8 STRC chr15 43599398 43618800 - protein_coding KNOWN OTTHUMG00000059899.5 19403 8267 188 ENSG00000090104.10 RGS1 chr1 192575727 192580031 + protein_coding KNOWN OTTHUMG00000035598.3 4305 4117 19 ENSG00000222398.1 RNU6-554P chr15 43602543 43602648 + snRNA KNOWN NA 106 106 1 ENSG00000166762.15 CATSPER2 chr15 43628503 43668118 - protein_coding KNOWN OTTHUMG00000059902.10 39616 8403 87 ENSG00000206991.1 RNU6-610P chr15 43637632 43637738 - snRNA KNOWN NA 107 107 1 ENSG00000275601.1 AC011330.13 chr15 43642389 43643023 - sense_intronic NOVEL OTTHUMG00000150036.1 635 635 1 ENSG00000224677.1 PDIA3P2 chr15 43649123 43649280 + unprocessed_pseudogene KNOWN OTTHUMG00000059904.1 158 158 1 ENSG00000249839.1 AC011330.5 chr15 43663654 43684339 - unprocessed_pseudogene KNOWN OTTHUMG00000059903.2 20686 3235 26 ENSG00000223572.8 CKMT1A chr15 43692886 43699222 + protein_coding KNOWN OTTHUMG00000059898.15 6337 3109 43 ENSG00000166763.7 STRCP1 chr15 43699488 43718184 - unprocessed_pseudogene KNOWN OTTHUMG00000059934.1 18697 5328 29 ENSG00000201136.1 RNU6-353P chr15 43702363 43702470 + snRNA KNOWN NA 108 108 1 ENSG00000205771.5 CATSPER2P1 chr15 43726918 43747094 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000059938.2 20177 3925 25 ENSG00000229484.1 RP5-888M10.2 chr1 12527724 12528420 + lincRNA NOVEL OTTHUMG00000013154.1 697 438 2 ENSG00000127074.13 RGS13 chr1 192636138 192660306 + protein_coding KNOWN OTTHUMG00000035601.1 24169 5923 21 ENSG00000206589.1 RNU6-354P chr15 43734179 43734285 - snRNA KNOWN NA 107 107 1 ENSG00000167004.11 PDIA3 chr15 43746392 43773279 + protein_coding KNOWN OTTHUMG00000044444.8 26888 4240 42 ENSG00000128886.10 ELL3 chr15 43772600 43777543 - protein_coding KNOWN OTTHUMG00000059936.4 4944 2880 49 ENSG00000262560.1 RP11-296A16.1 chr15 43772617 43799133 - protein_coding NOVEL OTTHUMG00000177927.1 26517 2326 17 ENSG00000140264.18 SERF2 chr15 43777087 43802589 + protein_coding KNOWN OTTHUMG00000059935.12 25503 7347 58 ENSG00000279808.1 AC018512.1 chr15 43782843 43783033 - protein_coding KNOWN NA 191 48 2 ENSG00000221792.1 MIR1282 chr15 43793659 43793759 - miRNA KNOWN NA 101 101 1 ENSG00000184716.12 SERINC4 chr15 43794162 43800221 - protein_coding KNOWN OTTHUMG00000060144.5 6060 2977 52 ENSG00000242028.4 HYPK chr15 43796142 43803043 + protein_coding KNOWN OTTHUMG00000060146.7 6902 6393 22 ENSG00000140259.6 MFAP1 chr15 43804492 43824802 - protein_coding KNOWN OTTHUMG00000060145.3 20311 2373 12 ENSG00000231767.3 RP11-92K2.2 chr1 192716183 192716648 + processed_pseudogene KNOWN OTTHUMG00000035593.1 466 466 1 ENSG00000092470.10 WDR76 chr15 43826963 43868419 + protein_coding KNOWN OTTHUMG00000060143.11 41457 4078 37 ENSG00000200391.1 Y_RNA chr15 43863893 43864005 - misc_RNA NOVEL NA 113 113 1 ENSG00000171877.18 FRMD5 chr15 43870761 44195252 - protein_coding KNOWN OTTHUMG00000060475.6 324492 6325 130 ENSG00000227973.1 PIN4P1 chr15 43875849 43876244 - processed_pseudogene KNOWN OTTHUMG00000060476.1 396 396 1 ENSG00000185607.5 ACTBP7 chr15 43989061 43990184 - processed_pseudogene KNOWN OTTHUMG00000060473.1 1124 1124 1 ENSG00000224055.1 GAPDHP55 chr15 44063511 44064313 + processed_pseudogene KNOWN OTTHUMG00000060474.1 803 803 1 ENSG00000166734.17 CASC4 chr15 44288729 44415758 + protein_coding KNOWN OTTHUMG00000131133.2 127030 6948 52 ENSG00000250130.1 RP11-616K22.1 chr15 44354691 44355692 + processed_pseudogene KNOWN OTTHUMG00000160038.1 1002 1002 1 ENSG00000259499.1 RP11-616K22.2 chr15 44387320 44390451 - lincRNA NOVEL OTTHUMG00000171845.1 3132 655 2 ENSG00000259595.1 RP11-516C1.1 chr15 44402685 44427144 - antisense NOVEL OTTHUMG00000171846.1 24460 625 5 ENSG00000228687.1 RP3-419C19.3 chr1 192796533 192797205 + unprocessed_pseudogene KNOWN OTTHUMG00000035596.1 673 378 2 ENSG00000137770.12 CTDSPL2 chr15 44427234 44529038 + protein_coding KNOWN OTTHUMG00000131159.2 101805 9665 71 ENSG00000259335.1 HNRNPMP1 chr15 44447577 44449344 - processed_pseudogene KNOWN OTTHUMG00000171870.1 1768 1768 1 ENSG00000259563.1 CTD-2329K10.1 chr15 44516650 44517483 - antisense NOVEL OTTHUMG00000171871.1 834 498 2 ENSG00000179523.4 EIF3J-AS1 chr15 44527257 44536923 - lincRNA NOVEL OTTHUMG00000171875.1 9667 3330 12 ENSG00000104131.11 EIF3J chr15 44537057 44563029 + protein_coding KNOWN OTTHUMG00000131158.3 25973 3195 34 ENSG00000259659.1 RP11-151N17.1 chr15 44557829 44559188 + sense_intronic NOVEL OTTHUMG00000171876.1 1360 653 2 ENSG00000104133.13 SPG11 chr15 44562696 44663678 - protein_coding KNOWN OTTHUMG00000131199.3 100983 11853 235 ENSG00000229474.5 PATL2 chr15 44665732 44711316 - protein_coding KNOWN OTTHUMG00000171932.1 45585 4771 68 ENSG00000206957.2 Y_RNA chr15 44697333 44697430 - misc_RNA NOVEL NA 98 98 1 ENSG00000166710.16 B2M chr15 44711477 44718877 + protein_coding KNOWN OTTHUMG00000131247.2 7401 3728 44 ENSG00000226814.2 RP3-419C19.2 chr1 192800571 192801141 + processed_pseudogene KNOWN OTTHUMG00000035595.2 571 571 1 ENSG00000185880.11 TRIM69 chr15 44728988 44767829 + protein_coding KNOWN OTTHUMG00000131246.3 38842 9265 56 ENSG00000276121.1 CTD-2008A1.3 chr15 44778196 44778721 - lincRNA NOVEL OTTHUMG00000186845.1 526 526 1 ENSG00000259479.5 SORD2P chr15 44826371 44884694 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000171966.2 58324 2301 24 ENSG00000259187.1 CTD-2008A1.1 chr15 44826540 44827094 + lincRNA NOVEL OTTHUMG00000171967.1 555 424 2 ENSG00000238845.1 Y_RNA chr15 44843612 44843724 + misc_RNA NOVEL NA 113 113 1 ENSG00000212424.1 RNU1-119P chr15 44884616 44884780 + snRNA KNOWN NA 165 165 1 ENSG00000259742.1 CTD-2014N11.1 chr15 44914802 44930622 - unprocessed_pseudogene KNOWN OTTHUMG00000171968.1 15821 509 5 ENSG00000259231.2 CTD-2014N11.2 chr15 44919376 44920820 + processed_pseudogene KNOWN OTTHUMG00000171969.2 1445 1141 2 ENSG00000252117.1 RNU6-1108P chr15 44927600 44927703 - snRNA KNOWN NA 104 104 1 ENSG00000167014.9 C15orf43 chr15 44956702 44979229 + protein_coding KNOWN OTTHUMG00000131264.2 22528 1487 19 ENSG00000116741.7 RGS2 chr1 192809039 192812283 + protein_coding KNOWN OTTHUMG00000035600.2 3245 2096 15 ENSG00000252475.1 RNU6-1332P chr15 44962830 44962933 + snRNA KNOWN NA 104 104 1 ENSG00000259304.1 CTD-2014N11.3 chr15 44970035 44971178 - processed_pseudogene KNOWN OTTHUMG00000171970.1 1144 1144 1 ENSG00000252288.1 RNU6-966P chr15 44973558 44973661 + snRNA KNOWN NA 104 104 1 ENSG00000212550.1 RNU1-78P chr15 45002864 45003028 - snRNA KNOWN NA 165 165 1 ENSG00000140263.12 SORD chr15 45023104 45077185 + protein_coding KNOWN OTTHUMG00000131265.3 54082 6159 42 ENSG00000259418.1 RP11-109D20.1 chr15 45041716 45058707 - antisense NOVEL OTTHUMG00000171971.1 16992 542 4 ENSG00000252171.1 Y_RNA chr15 45047103 45047215 - misc_RNA NOVEL NA 113 113 1 ENSG00000259352.1 RP11-109D20.2 chr15 45073492 45074048 - antisense NOVEL OTTHUMG00000171972.1 557 426 2 ENSG00000140279.11 DUOX2 chr15 45092650 45114344 - protein_coding KNOWN OTTHUMG00000131355.3 21695 9834 89 ENSG00000140274.12 DUOXA2 chr15 45114321 45118421 + protein_coding KNOWN OTTHUMG00000131354.3 4101 2554 17 ENSG00000223075.1 RN7SKP126 chr1 192875686 192875985 - misc_RNA KNOWN NA 300 300 1 ENSG00000140254.11 DUOXA1 chr15 45117367 45129938 - protein_coding KNOWN OTTHUMG00000131352.2 12572 3721 102 ENSG00000137857.16 DUOX1 chr15 45129933 45165576 + protein_coding KNOWN OTTHUMG00000171987.3 35644 8784 156 ENSG00000259539.1 CTD-2651B20.1 chr15 45152664 45167526 - 3prime_overlapping_ncrna NOVEL OTTHUMG00000171988.1 14863 595 2 ENSG00000138606.18 SHF chr15 45167214 45201175 - protein_coding KNOWN OTTHUMG00000131353.4 33962 4894 52 ENSG00000259519.1 RP11-519G16.2 chr15 45170344 45199958 + antisense NOVEL OTTHUMG00000172000.1 29615 292 2 ENSG00000259932.1 CTD-2651B20.7 chr15 45198517 45199139 - sense_intronic NOVEL OTTHUMG00000172833.1 623 623 1 ENSG00000260035.1 CTD-2651B20.6 chr15 45200325 45200632 - sense_intronic NOVEL OTTHUMG00000172834.1 308 308 1 ENSG00000279014.1 CTD-2651B20.8 chr15 45214448 45215044 - TEC KNOWN OTTHUMG00000172835.1 597 597 1 ENSG00000261709.3 SNORA11 chr15 45214906 45215033 - snoRNA NOVEL NA 128 128 1 ENSG00000259338.1 CTD-2651B20.2 chr15 45215547 45215943 + processed_pseudogene KNOWN OTTHUMG00000172001.1 397 397 1 ENSG00000234871.1 LINC01032 chr1 192937300 192948257 - lincRNA NOVEL OTTHUMG00000041137.1 10958 276 2 ENSG00000259520.4 CTD-2651B20.3 chr15 45251580 45279251 - antisense NOVEL OTTHUMG00000172002.2 27672 1455 12 ENSG00000137860.10 SLC28A2 chr15 45252230 45277845 + protein_coding KNOWN OTTHUMG00000131426.3 25616 5192 33 ENSG00000235390.4 CTD-2651B20.5 chr15 45321077 45321692 - processed_pseudogene KNOWN OTTHUMG00000172003.2 616 616 1 ENSG00000259433.2 CTD-2651B20.4 chr15 45330209 45332634 - processed_pseudogene KNOWN OTTHUMG00000172004.2 2426 2426 1 ENSG00000238941.1 RNU6-953P chr15 45354779 45354885 - snRNA KNOWN NA 107 107 1 ENSG00000171766.14 GATM chr15 45361124 45402327 - protein_coding KNOWN OTTHUMG00000131427.3 41204 6644 60 ENSG00000275672.1 GATM-AS1 chr15 45378700 45380123 + antisense NOVEL OTTHUMG00000186847.1 1424 1424 1 ENSG00000171763.16 SPATA5L1 chr15 45402331 45421419 + protein_coding KNOWN OTTHUMG00000131425.4 19089 3406 34 ENSG00000166920.9 C15orf48 chr15 45430529 45448761 + protein_coding KNOWN OTTHUMG00000131424.2 18233 1405 16 ENSG00000259342.1 RP11-519G16.5 chr15 45430652 45441808 - antisense NOVEL OTTHUMG00000172024.1 11157 729 3 ENSG00000234473.1 ZNF101P2 chr1 192993449 192994677 - processed_pseudogene KNOWN OTTHUMG00000035560.1 1229 1229 1 ENSG00000211519.1 MIR147B chr15 45433050 45433129 + miRNA KNOWN NA 80 80 1 ENSG00000259354.4 RP11-519G16.3 chr15 45448427 45513767 + antisense NOVEL OTTHUMG00000172025.1 65341 3886 18 ENSG00000104154.6 SLC30A4 chr15 45479611 45522807 - protein_coding KNOWN OTTHUMG00000131439.3 43197 8073 11 ENSG00000179362.13 HMGN2P46 chr15 45511136 45586290 + transcribed_processed_pseudogene KNOWN OTTHUMG00000153087.4 75155 3091 30 ENSG00000207516.1 SNORA41 chr15 45537250 45537377 + snoRNA NOVEL NA 128 128 1 ENSG00000259681.1 RP11-96O20.2 chr15 45558598 45562877 + lincRNA NOVEL OTTHUMG00000172027.1 4280 431 2 ENSG00000259427.2 DPPA5P2 chr15 45566776 45567074 + transcribed_processed_pseudogene KNOWN OTTHUMG00000172028.2 299 299 1 ENSG00000275709.1 RP11-96O20.5 chr15 45585757 45586304 - lincRNA NOVEL OTTHUMG00000186848.1 548 548 1 ENSG00000104164.9 BLOC1S6 chr15 45587123 45615999 + protein_coding KNOWN OTTHUMG00000131477.3 28877 6812 82 ENSG00000260170.1 RP11-96O20.4 chr15 45587351 45676314 + protein_coding NOVEL OTTHUMG00000172725.2 88964 1060 6 ENSG00000116750.12 UCHL5 chr1 193012250 193060080 - protein_coding KNOWN OTTHUMG00000035561.4 47831 6661 109 ENSG00000200419.1 Y_RNA chr15 45591984 45592085 + misc_RNA NOVEL NA 102 102 1 ENSG00000137767.12 SQRDL chr15 45631148 45691294 + protein_coding KNOWN OTTHUMG00000131476.2 60147 3088 41 ENSG00000273972.1 CTD-2306A12.1 chr15 45702640 45703183 + lincRNA NOVEL OTTHUMG00000186849.1 544 544 1 ENSG00000259200.1 RP11-718O11.1 chr15 45705078 45931069 + lincRNA NOVEL OTTHUMG00000172029.1 225992 1270 10 ENSG00000259743.2 RP11-315O8.1 chr15 46099193 46100392 - processed_pseudogene KNOWN OTTHUMG00000172030.2 1200 800 2 ENSG00000259593.1 RP11-640I2.1 chr15 46341354 46341599 + processed_pseudogene KNOWN OTTHUMG00000172031.1 246 246 1 ENSG00000238819.1 SNORD11 chr15 46351662 46351746 - snoRNA NOVEL NA 85 85 1 ENSG00000238456.1 RNU6-1014P chr15 46660658 46660760 + snRNA KNOWN NA 103 103 1 ENSG00000259255.1 RP11-627D16.1 chr15 46693288 46804844 + lincRNA NOVEL OTTHUMG00000172048.1 111557 539 2 ENSG00000223308.1 RN7SKP101 chr15 46720193 46720512 - misc_RNA KNOWN NA 320 320 1 ENSG00000238754.1 snoU109 chr1 193057281 193057415 - snoRNA NOVEL NA 135 135 1 ENSG00000259509.2 RP11-627D16.2 chr15 46827526 46827958 + processed_pseudogene KNOWN OTTHUMG00000172049.2 433 433 1 ENSG00000252500.1 AC087433.1 chr15 46957533 46957617 - miRNA NOVEL NA 85 85 1 ENSG00000259752.2 FKSG62 chr15 47133652 47134026 - protein_coding KNOWN NA 375 375 1 ENSG00000137872.14 SEMA6D chr15 47184101 47774223 + protein_coding KNOWN OTTHUMG00000172110.1 590123 8560 215 ENSG00000222311.1 AC084882.1 chr15 47242204 47242279 + miRNA NOVEL NA 76 76 1 ENSG00000222343.1 RN7SKP139 chr15 47272597 47272889 + misc_RNA KNOWN NA 293 293 1 ENSG00000259554.1 RP11-408J6.1 chr15 47274183 47275164 + sense_intronic NOVEL OTTHUMG00000172111.1 982 555 2 ENSG00000259221.4 CTD-2050N2.1 chr15 47359430 47396732 - antisense NOVEL OTTHUMG00000172055.1 37303 1481 12 ENSG00000259360.1 RP11-142J21.1 chr15 47397501 47399554 - antisense NOVEL OTTHUMG00000172056.1 2054 581 2 ENSG00000259740.1 RP11-142J21.2 chr15 47525169 47527756 + sense_intronic NOVEL OTTHUMG00000172112.1 2588 396 2 ENSG00000162496.7 DHRS3 chr1 12567910 12617731 - protein_coding KNOWN OTTHUMG00000001885.4 49822 3036 16 ENSG00000116747.11 TROVE2 chr1 193059422 193091777 + protein_coding KNOWN OTTHUMG00000035675.3 32356 9102 83 ENSG00000259588.1 RP11-552E10.1 chr15 47603880 47606352 - antisense NOVEL OTTHUMG00000172057.1 2473 472 3 ENSG00000213862.4 CTD-2270N23.1 chr15 47730144 47730935 - processed_pseudogene KNOWN OTTHUMG00000157911.1 792 792 1 ENSG00000259572.4 LINC01491 chr15 47803384 47846236 - lincRNA NOVEL OTTHUMG00000172113.1 42853 966 13 ENSG00000259754.1 RP11-208K4.1 chr15 47884310 48049112 + lincRNA NOVEL OTTHUMG00000172114.1 164803 581 3 ENSG00000259730.1 CTD-2007H18.1 chr15 47944044 47949509 + lincRNA NOVEL OTTHUMG00000172115.1 5466 325 2 ENSG00000188467.9 SLC24A5 chr15 48120972 48142672 + protein_coding KNOWN OTTHUMG00000131494.4 21701 4778 24 ENSG00000104177.16 MYEF2 chr15 48134631 48178517 - protein_coding KNOWN OTTHUMG00000172120.4 43887 14067 123 ENSG00000266143.1 AC066612.1 chr15 48161805 48161903 + miRNA NOVEL NA 99 99 1 ENSG00000259235.1 RP11-605F22.2 chr15 48189037 48191691 - lincRNA NOVEL OTTHUMG00000172151.1 2655 831 9 ENSG00000233932.4 CTXN2 chr15 48191539 48203756 + protein_coding KNOWN OTTHUMG00000172152.1 12218 2828 2 ENSG00000272579.1 RP11-101E13.5 chr1 193090866 193091556 - antisense NOVEL OTTHUMG00000186491.1 691 691 1 ENSG00000074803.16 SLC12A1 chr15 48191664 48304078 + protein_coding KNOWN OTTHUMG00000131495.4 112415 12476 171 ENSG00000259385.1 RP11-605F22.1 chr15 48192191 48201684 - antisense NOVEL OTTHUMG00000172153.1 9494 695 2 ENSG00000259488.2 RP11-154J22.1 chr15 48312353 48331856 - antisense NOVEL OTTHUMG00000172154.3 19504 4710 7 ENSG00000202542.1 Y_RNA chr15 48325558 48325671 - misc_RNA NOVEL NA 114 114 1 ENSG00000128951.12 DUT chr15 48331011 48343373 + protein_coding KNOWN OTTHUMG00000172155.2 12363 3674 63 ENSG00000166147.12 FBN1 chr15 48408306 48645849 - protein_coding KNOWN OTTHUMG00000172218.2 237544 16057 142 ENSG00000274654.1 CTD-3247H4.2 chr15 48528980 48529728 - sense_intronic NOVEL OTTHUMG00000186855.1 749 749 1 ENSG00000259705.1 RP11-227D13.1 chr15 48645951 48652016 + lincRNA NOVEL OTTHUMG00000172157.1 6066 1943 2 ENSG00000273925.1 RP11-227D13.5 chr15 48662531 48663056 - lincRNA NOVEL OTTHUMG00000186856.2 526 526 1 ENSG00000103995.12 CEP152 chr15 48712928 48811146 - protein_coding KNOWN OTTHUMG00000172219.1 98219 8168 110 ENSG00000023572.7 GLRX2 chr1 193096468 193106114 - protein_coding KNOWN OTTHUMG00000035677.1 9647 1299 12 ENSG00000259216.2 RP11-227D13.2 chr15 48725338 48725827 + processed_pseudogene KNOWN OTTHUMG00000172158.2 490 490 1 ENSG00000259469.1 RP11-227D13.4 chr15 48729080 48729844 - lincRNA NOVEL OTTHUMG00000172220.1 765 540 2 ENSG00000259670.1 RP11-485O10.2 chr15 48783190 48784121 + antisense NOVEL OTTHUMG00000172159.1 932 406 2 ENSG00000259700.3 RP11-485O10.3 chr15 48810701 48811909 + processed_transcript NOVEL OTTHUMG00000172160.1 1209 1209 3 ENSG00000185634.10 SHC4 chr15 48823735 48963444 - protein_coding KNOWN OTTHUMG00000131513.2 139710 6063 45 ENSG00000255302.3 EID1 chr15 48877886 48880183 + protein_coding KNOWN OTTHUMG00000165911.2 2298 2298 5 ENSG00000259602.1 RP11-138E16.1 chr15 48938236 48948031 + antisense NOVEL OTTHUMG00000172161.1 9796 666 4 ENSG00000259500.1 KRT8P24 chr15 48971803 48973361 + processed_pseudogene KNOWN OTTHUMG00000172162.1 1559 1559 1 ENSG00000280771.1 AC091073.1 chr15 48972595 48972727 - miRNA NOVEL NA 133 133 1 ENSG00000138593.7 SECISBP2L chr15 48988476 49046563 - protein_coding KNOWN OTTHUMG00000172194.1 58088 8699 78 ENSG00000134371.9 CDC73 chr1 193122017 193253901 + protein_coding KNOWN OTTHUMG00000035676.2 131885 5352 27 ENSG00000207105.1 Y_RNA chr15 48995912 48996022 - misc_RNA NOVEL NA 111 111 1 ENSG00000265942.2 RN7SL577P chr15 49042341 49042643 - misc_RNA KNOWN NA 303 303 1 ENSG00000259656.1 RP11-325E5.1 chr15 49101791 49103264 + lincRNA NOVEL OTTHUMG00000172323.1 1474 743 2 ENSG00000166200.13 COPS2 chr15 49106068 49155661 - protein_coding KNOWN OTTHUMG00000172324.2 49594 7510 62 ENSG00000200120.1 Y_RNA chr15 49137762 49137863 - misc_RNA NOVEL NA 102 102 1 ENSG00000156958.13 GALK2 chr15 49155656 49367869 + protein_coding KNOWN OTTHUMG00000172325.2 212214 7531 151 ENSG00000259467.1 NDUFAF4P1 chr15 49156329 49156847 + processed_pseudogene KNOWN OTTHUMG00000172326.1 519 519 1 ENSG00000264210.1 MIR4716 chr15 49169070 49169153 - miRNA KNOWN NA 84 84 1 ENSG00000259545.2 RP11-325E5.4 chr15 49177610 49178741 - processed_pseudogene KNOWN OTTHUMG00000172327.2 1132 598 2 ENSG00000243338.3 RN7SL307P chr15 49198900 49199194 - misc_RNA KNOWN NA 295 295 1 ENSG00000221680.1 MIR1278 chr1 193136503 193136583 + miRNA KNOWN NA 81 81 1 ENSG00000166262.14 FAM227B chr15 49326962 49620931 - protein_coding KNOWN OTTHUMG00000172328.2 293970 6020 90 ENSG00000275580.1 RP11-295H24.4 chr15 49343608 49344254 + lincRNA NOVEL OTTHUMG00000186857.1 647 647 1 ENSG00000276593.1 RP11-295H24.5 chr15 49353485 49354034 + sense_intronic NOVEL OTTHUMG00000186858.1 550 550 1 ENSG00000259531.2 RP11-295H24.3 chr15 49365124 49366685 - processed_pseudogene KNOWN OTTHUMG00000172329.2 1562 1562 1 ENSG00000140285.8 FGF7 chr15 49423096 49488775 + protein_coding KNOWN OTTHUMG00000131517.3 65680 6657 21 ENSG00000104047.13 DTWD1 chr15 49620980 49656232 + protein_coding KNOWN OTTHUMG00000131567.3 35253 15053 49 ENSG00000259388.1 CTD-2647E9.1 chr15 49794246 49796097 + processed_pseudogene KNOWN OTTHUMG00000172366.1 1852 1852 1 ENSG00000104043.13 ATP8B4 chr15 49858238 50182817 - protein_coding KNOWN OTTHUMG00000172368.3 324580 10861 201 ENSG00000259188.4 CTD-2647E9.3 chr15 49879604 49883525 + antisense NOVEL OTTHUMG00000172369.1 3922 1341 6 ENSG00000201086.1 RNA5SP394 chr15 49982443 49982561 + rRNA KNOWN NA 119 119 1 ENSG00000162630.5 B3GALT2 chr1 193179045 193186654 - protein_coding KNOWN OTTHUMG00000035687.1 7610 3274 2 ENSG00000140284.9 SLC27A2 chr15 50182196 50236395 + protein_coding KNOWN OTTHUMG00000131643.2 54200 2802 33 ENSG00000200605.1 Y_RNA chr15 50221888 50221996 + misc_RNA NOVEL NA 109 109 1 ENSG00000140287.9 HDC chr15 50241947 50266026 - protein_coding KNOWN OTTHUMG00000131644.2 24080 3956 48 ENSG00000241175.3 RN7SL494P chr15 50244628 50244931 - misc_RNA KNOWN NA 304 304 1 ENSG00000104064.15 GABPB1 chr15 50275392 50355408 - protein_coding KNOWN OTTHUMG00000131642.3 80017 11726 76 ENSG00000271819.1 U6 chr15 50347423 50347529 - snRNA NOVEL NA 107 107 1 ENSG00000244879.4 GABPB1-AS1 chr15 50354959 50372202 + antisense KNOWN OTTHUMG00000172396.2 17244 17179 11 ENSG00000259715.1 CTD-3110H11.1 chr15 50359450 50360194 - lincRNA NOVEL OTTHUMG00000172397.1 745 612 2 ENSG00000264109.1 MIR4712 chr15 50360329 50360410 + miRNA KNOWN NA 82 82 1 ENSG00000259465.2 AHCYP7 chr15 50417385 50418692 + processed_pseudogene KNOWN OTTHUMG00000172446.2 1308 1308 1 ENSG00000276735.1 Metazoa_SRP chr1 193236794 193237107 - misc_RNA NOVEL NA 314 314 1 ENSG00000138592.12 USP8 chr15 50424380 50514419 + protein_coding KNOWN OTTHUMG00000131645.7 90040 20639 144 ENSG00000252376.1 RNA5SP395 chr15 50463381 50463498 + rRNA KNOWN NA 118 118 1 ENSG00000242737.1 RP11-562A8.1 chr15 50466738 50467096 + processed_pseudogene KNOWN OTTHUMG00000157916.1 359 359 1 ENSG00000259618.1 RP11-562A8.5 chr15 50494018 50497080 - lincRNA NOVEL OTTHUMG00000172447.1 3063 297 2 ENSG00000259298.1 RP11-562A8.4 chr15 50497195 50498744 - antisense NOVEL OTTHUMG00000172448.1 1550 667 3 ENSG00000170236.13 USP50 chr15 50500562 50546708 - protein_coding KNOWN OTTHUMG00000167591.3 46147 1907 28 ENSG00000092439.12 TRPM7 chr15 50552473 50686815 - protein_coding KNOWN OTTHUMG00000172449.2 134343 12333 124 ENSG00000259684.1 RP11-120K9.2 chr15 50557601 50560500 + antisense NOVEL OTTHUMG00000172450.1 2900 606 3 ENSG00000243027.3 RN7SL354P chr15 50688900 50689193 + misc_RNA KNOWN NA 294 294 1 ENSG00000138600.8 SPPL2A chr15 50702266 50765808 - protein_coding KNOWN OTTHUMG00000131647.4 63543 8144 47 ENSG00000232077.1 LINC01031 chr1 193304745 193365953 + lincRNA NOVEL OTTHUMG00000035686.1 61209 779 4 ENSG00000279665.1 RP11-507J18.5 chr15 50742702 50743276 - TEC KNOWN OTTHUMG00000176908.1 575 575 1 ENSG00000259773.1 RP11-507J18.2 chr15 50746709 50749829 + antisense NOVEL OTTHUMG00000172451.1 3121 304 2 ENSG00000241130.1 RP11-507J18.1 chr15 50798670 50798951 + processed_pseudogene KNOWN OTTHUMG00000157918.1 282 282 1 ENSG00000273674.3 CTD-2378E12.1 chr15 50839875 50908599 - lincRNA NOVEL OTTHUMG00000186859.1 68725 2669 14 ENSG00000081014.9 AP4E1 chr15 50908672 51005900 + protein_coding KNOWN OTTHUMG00000172458.1 97229 7359 101 ENSG00000259378.1 DCAF13P3 chr15 50944663 50945996 + processed_pseudogene KNOWN OTTHUMG00000172459.1 1334 1334 1 ENSG00000259240.1 RP11-108K3.1 chr15 51037488 51293912 + lincRNA NOVEL OTTHUMG00000172467.1 256425 561 3 ENSG00000183578.5 TNFAIP8L3 chr15 51056598 51105276 - protein_coding KNOWN OTTHUMG00000172460.1 48679 2262 3 ENSG00000259204.1 RP11-394B5.2 chr15 51064609 51069586 - sense_intronic NOVEL OTTHUMG00000172461.1 4978 308 2 ENSG00000137869.12 CYP19A1 chr15 51208057 51338610 - protein_coding KNOWN OTTHUMG00000131747.5 130554 8437 128 ENSG00000226640.2 RP11-21J7.1 chr1 193678894 193727035 + lincRNA NOVEL OTTHUMG00000035690.2 48142 401 3 ENSG00000266593.1 MIR4713 chr15 51242190 51242264 + miRNA KNOWN NA 75 75 1 ENSG00000259701.1 RP11-108K3.3 chr15 51278927 51280015 - sense_intronic NOVEL OTTHUMG00000172484.1 1089 363 2 ENSG00000278098.1 MIR7973-1 chr15 51314034 51314109 + miRNA KNOWN NA 76 76 1 ENSG00000259306.2 RP11-108K3.2 chr15 51315841 51321996 + lincRNA NOVEL OTTHUMG00000172468.1 6156 776 3 ENSG00000186417.12 GLDN chr15 51341629 51408013 + protein_coding KNOWN OTTHUMG00000131746.5 66385 7144 56 ENSG00000270378.1 RP11-108K3.5 chr15 51351100 51351192 - processed_pseudogene KNOWN OTTHUMG00000184833.1 93 93 1 ENSG00000259194.1 RP11-108K3.4 chr15 51367377 51369110 + sense_intronic NOVEL OTTHUMG00000172523.1 1734 174 2 ENSG00000259678.1 RP11-707P17.1 chr15 51414097 51498833 + antisense NOVEL OTTHUMG00000172524.1 84737 560 6 ENSG00000104093.12 DMXL2 chr15 51447711 51622833 - protein_coding KNOWN OTTHUMG00000131749.2 175123 13807 189 ENSG00000259668.4 RP11-707P17.2 chr15 51457286 51460582 + antisense NOVEL OTTHUMG00000172525.1 3297 1263 8 ENSG00000237011.1 RP11-98G13.1 chr1 193684246 193688429 - lincRNA NOVEL OTTHUMG00000035685.2 4184 850 3 ENSG00000104112.7 SCG3 chr15 51681353 51721031 + protein_coding KNOWN OTTHUMG00000131748.3 39679 3315 28 ENSG00000259241.1 RP11-313P18.2 chr15 51693216 51695765 - lincRNA NOVEL OTTHUMG00000172526.1 2550 855 2 ENSG00000259296.1 RP11-313P18.1 chr15 51707995 51715220 - antisense NOVEL OTTHUMG00000172527.1 7226 387 3 ENSG00000140280.12 LYSMD2 chr15 51723011 51751585 - protein_coding KNOWN OTTHUMG00000131804.2 28575 2074 12 ENSG00000128872.8 TMOD2 chr15 51751561 51816368 + protein_coding KNOWN OTTHUMG00000131805.2 64808 11636 40 ENSG00000259377.1 CTD-2308G16.1 chr15 51752485 51756475 + sense_intronic NOVEL OTTHUMG00000172571.1 3991 581 2 ENSG00000138594.11 TMOD3 chr15 51829628 51947295 + protein_coding KNOWN OTTHUMG00000131803.5 117668 10632 61 ENSG00000274954.1 RP11-56B16.6 chr15 51833134 51833426 + sense_intronic NOVEL OTTHUMG00000186860.1 293 293 1 ENSG00000277677.1 Metazoa_SRP chr15 51858070 51858352 - misc_RNA NOVEL NA 283 283 1 ENSG00000259632.2 RP11-56B16.1 chr15 51859185 51861293 - processed_pseudogene KNOWN OTTHUMG00000172528.2 2109 1800 2 ENSG00000221340.1 RNU6ATAC18P chr1 12569972 12570072 - snRNA KNOWN NA 101 101 1 ENSG00000237213.2 RPL23AP22 chr1 193756815 193757267 - processed_pseudogene KNOWN OTTHUMG00000035691.2 453 453 1 ENSG00000207484.1 Y_RNA chr15 51884556 51884653 + misc_RNA NOVEL NA 98 98 1 ENSG00000259201.1 RP11-56B16.5 chr15 51887560 51901123 - antisense NOVEL OTTHUMG00000172538.1 13564 510 4 ENSG00000272337.1 U6 chr15 51907200 51907305 + snRNA NOVEL NA 106 106 1 ENSG00000259185.1 RP11-56B16.4 chr15 51908902 51909642 - antisense NOVEL OTTHUMG00000172539.1 741 510 2 ENSG00000259556.2 RP11-56B16.2 chr15 51919073 51930627 - unprocessed_pseudogene KNOWN OTTHUMG00000172529.2 11555 1041 9 ENSG00000166477.11 LEO1 chr15 51938025 51971806 - protein_coding KNOWN OTTHUMG00000131843.2 33782 2679 24 ENSG00000069956.10 MAPK6 chr15 51952106 52067372 + protein_coding KNOWN OTTHUMG00000131891.3 115267 6388 24 ENSG00000259438.1 CTD-2650P22.1 chr15 52010999 52019095 - lincRNA NOVEL OTTHUMG00000172595.1 8097 865 2 ENSG00000274528.1 CTD-2650P22.2 chr15 52017167 52018032 - sense_intronic NOVEL OTTHUMG00000186862.1 866 866 1 ENSG00000259398.1 RP11-430B1.1 chr15 52033707 52035625 + sense_intronic NOVEL OTTHUMG00000172590.2 1919 381 2 ENSG00000275233.1 AL136456.1 chr1 194089422 194089520 - miRNA NOVEL NA 99 99 1 ENSG00000259712.1 CTD-2184D3.5 chr15 52056675 52100523 - antisense NOVEL OTTHUMG00000172596.1 43849 635 2 ENSG00000259178.1 CTD-2184D3.3 chr15 52082302 52086574 + lincRNA NOVEL OTTHUMG00000172597.1 4273 462 3 ENSG00000242327.1 CTD-2184D3.1 chr15 52095295 52095747 + processed_pseudogene KNOWN OTTHUMG00000157921.1 453 453 1 ENSG00000137875.4 BCL2L10 chr15 52109263 52112775 - protein_coding KNOWN OTTHUMG00000131893.2 3513 1319 4 ENSG00000069966.17 GNB5 chr15 52115105 52191369 - protein_coding KNOWN OTTHUMG00000131892.4 76265 13302 76 ENSG00000259327.1 CTD-2184D3.6 chr15 52116574 52122131 + lincRNA NOVEL OTTHUMG00000172599.1 5558 874 2 ENSG00000259709.1 CTD-2184D3.7 chr15 52124561 52140246 + antisense NOVEL OTTHUMG00000172600.1 15686 1538 6 ENSG00000206995.1 Y_RNA chr15 52162751 52162852 + misc_RNA NOVEL NA 102 102 1 ENSG00000259577.1 RP11-430B1.2 chr15 52180093 52205874 + lincRNA NOVEL OTTHUMG00000172601.1 25782 2096 5 ENSG00000128833.11 MYO5C chr15 52192322 52295798 - protein_coding KNOWN OTTHUMG00000172630.1 103477 10045 140 ENSG00000227240.1 RP11-563D10.1 chr1 194149473 194198694 + lincRNA NOVEL OTTHUMG00000035564.1 49222 832 3 ENSG00000221052.2 MIR1266 chr15 52277095 52277207 - miRNA KNOWN NA 113 113 1 ENSG00000197535.13 MYO5A chr15 52307283 52529050 - protein_coding KNOWN OTTHUMG00000137383.5 221768 12988 298 ENSG00000280817.1 AC018902.1 chr15 52430064 52430768 + protein_coding NOVEL NA 705 45 3 ENSG00000231169.4 EEF1B2P1 chr15 52505191 52505862 + processed_pseudogene KNOWN OTTHUMG00000172676.2 672 672 1 ENSG00000128989.9 ARPP19 chr15 52547045 52569883 - protein_coding KNOWN OTTHUMG00000172677.2 22839 6917 45 ENSG00000260618.1 RP11-23N2.4 chr15 52577842 52598709 + antisense NOVEL OTTHUMG00000172687.1 20868 1211 7 ENSG00000047346.11 FAM214A chr15 52581317 52709817 - protein_coding KNOWN OTTHUMG00000172688.2 128501 9832 105 ENSG00000259935.1 RP11-519C12.1 chr15 52648634 52649866 - sense_intronic NOVEL OTTHUMG00000172689.1 1233 540 2 ENSG00000169856.8 ONECUT1 chr15 52756989 52791078 - protein_coding KNOWN OTTHUMG00000131899.6 34090 3850 11 ENSG00000259203.1 RP11-209K10.2 chr15 52801614 52804942 - lincRNA NOVEL OTTHUMG00000172420.1 3329 572 3 ENSG00000233057.1 EEF1A1P14 chr1 194188967 194190342 + processed_pseudogene KNOWN OTTHUMG00000035565.1 1376 1376 1 ENSG00000214896.4 RPSAP55 chr15 52885595 52886470 + processed_pseudogene KNOWN OTTHUMG00000157924.1 876 876 1 ENSG00000259612.1 EEF1A1P22 chr15 52937139 52938518 - processed_pseudogene KNOWN OTTHUMG00000172482.1 1380 1380 1 ENSG00000259237.1 RP11-209E8.1 chr15 53116365 53129698 + lincRNA NOVEL OTTHUMG00000172483.1 13334 601 3 ENSG00000278568.1 AC066614.1 chr15 53431960 53432027 + miRNA NOVEL NA 68 68 1 ENSG00000166415.13 WDR72 chr15 53513741 53762878 - protein_coding KNOWN OTTHUMG00000131939.4 249138 8572 103 ENSG00000252066.1 RNU2-53P chr15 53651977 53652123 + snRNA KNOWN NA 147 147 1 ENSG00000206641.1 RNU6-449P chr15 53764204 53764310 + snRNA KNOWN NA 107 107 1 ENSG00000259301.2 RP11-643A5.1 chr15 53837271 53837560 - processed_pseudogene KNOWN OTTHUMG00000172516.2 290 290 1 ENSG00000280362.1 RP11-643A5.3 chr15 53910769 53914712 + TEC KNOWN OTTHUMG00000176909.1 3944 3944 1 ENSG00000259669.4 RP11-643A5.2 chr15 53947624 53976908 - lincRNA NOVEL OTTHUMG00000172517.2 29285 1295 16 ENSG00000231714.1 RP11-476H20.1 chr1 194350943 194352426 + lincRNA NOVEL OTTHUMG00000035603.1 1484 440 2 ENSG00000137766.15 UNC13C chr15 54012904 54633414 + protein_coding KNOWN OTTHUMG00000172542.4 620511 13457 58 ENSG00000259619.2 RP11-390M11.1 chr15 54048588 54050876 - processed_pseudogene KNOWN OTTHUMG00000172592.2 2289 2289 1 ENSG00000259550.2 HNRNPA1P74 chr15 54320731 54321565 - processed_pseudogene KNOWN OTTHUMG00000172593.2 835 835 1 ENSG00000260937.4 RP11-548M13.1 chr15 55056747 55092173 + lincRNA NOVEL OTTHUMG00000172651.1 35427 518 4 ENSG00000279145.1 RP11-547D13.1 chr15 55171972 55178175 - TEC KNOWN OTTHUMG00000172652.1 6204 5819 2 ENSG00000137876.8 RSL24D1 chr15 55180806 55197067 - protein_coding KNOWN OTTHUMG00000131957.2 16262 3009 26 ENSG00000069974.14 RAB27A chr15 55202966 55319113 - protein_coding KNOWN OTTHUMG00000131959.2 116148 5605 65 ENSG00000276533.1 RP11-139H15.5 chr15 55288849 55289346 - sense_intronic NOVEL OTTHUMG00000186896.1 498 498 1 ENSG00000225973.3 PIGBOS1 chr15 55317184 55319161 - protein_coding NOVEL OTTHUMG00000172653.3 1978 982 6 ENSG00000069943.8 PIGB chr15 55318960 55355648 + protein_coding KNOWN OTTHUMG00000172654.1 36689 4542 66 ENSG00000251813.1 RNU6-983P chr1 194488103 194488205 - snRNA KNOWN NA 103 103 1 ENSG00000260916.4 CCPG1 chr15 55340032 55408510 - protein_coding KNOWN OTTHUMG00000172678.2 68479 8790 73 ENSG00000274765.1 RP11-139H15.7 chr15 55343141 55343575 - sense_intronic NOVEL OTTHUMG00000186899.1 435 435 1 ENSG00000277548.1 RP11-139H15.6 chr15 55346347 55346752 - sense_intronic NOVEL OTTHUMG00000186898.1 406 406 1 ENSG00000261771.4 DYX1C1-CCPG1 chr15 55355248 55498360 - processed_transcript KNOWN OTTHUMG00000172694.1 143113 4589 26 ENSG00000207964.2 MIR628 chr15 55372921 55373032 - miRNA KNOWN NA 112 112 1 ENSG00000261652.2 C15orf65 chr15 55408548 55418764 + protein_coding KNOWN OTTHUMG00000172679.2 10217 843 4 ENSG00000256061.6 DYX1C1 chr15 55410525 55508234 - protein_coding KNOWN OTTHUMG00000132008.2 97710 2934 52 ENSG00000260036.1 RP11-178D12.2 chr15 55442635 55443357 - processed_pseudogene KNOWN OTTHUMG00000172695.1 723 723 1 ENSG00000171016.10 PYGO1 chr15 55538890 55588947 - protein_coding KNOWN OTTHUMG00000132009.3 50058 8594 6 ENSG00000166450.11 PRTG chr15 55611546 55743090 - protein_coding KNOWN OTTHUMG00000172591.2 131545 14566 32 ENSG00000228167.1 RP11-489C13.1 chr1 194718795 194719236 + processed_pseudogene KNOWN OTTHUMG00000035605.1 442 442 1 ENSG00000259180.1 RP11-420M1.2 chr15 55680385 55681463 + antisense NOVEL OTTHUMG00000172615.1 1079 364 2 ENSG00000259369.1 RP11-291H24.1 chr15 55746639 55746767 + processed_pseudogene KNOWN OTTHUMG00000172616.1 129 129 1 ENSG00000069869.14 NEDD4 chr15 55826922 55993746 - protein_coding KNOWN OTTHUMG00000132015.4 166825 9097 180 ENSG00000230183.4 CNOT6LP1 chr15 56005715 56007176 - processed_pseudogene KNOWN OTTHUMG00000172614.1 1462 1462 1 ENSG00000239703.3 RN7SL568P chr15 56029684 56029981 - misc_RNA KNOWN NA 298 298 1 ENSG00000261333.2 CD24P2 chr15 56071421 56071639 + processed_pseudogene KNOWN OTTHUMG00000176398.2 219 219 1 ENSG00000181827.13 RFX7 chr15 56087280 56243266 - protein_coding KNOWN OTTHUMG00000172508.6 155987 10588 25 ENSG00000261072.2 RP11-5N19.3 chr15 56192353 56193262 - processed_pseudogene KNOWN OTTHUMG00000176399.2 910 910 1 ENSG00000151575.13 TEX9 chr15 56244009 56445997 + protein_coding KNOWN OTTHUMG00000132035.5 201989 8290 59 ENSG00000275417.1 RP11-844G16.3 chr15 56248787 56249127 + sense_intronic NOVEL OTTHUMG00000186900.1 341 341 1 ENSG00000265108.1 AL357932.1 chr1 195126681 195126776 + miRNA NOVEL NA 96 96 1 ENSG00000199784.1 RNU6-1287P chr15 56274530 56274636 - snRNA KNOWN NA 107 107 1 ENSG00000261174.2 RP11-844G16.1 chr15 56323193 56323719 + processed_pseudogene KNOWN OTTHUMG00000172638.2 527 527 1 ENSG00000259941.1 RP11-48G14.2 chr15 56394321 56396785 - lincRNA NOVEL OTTHUMG00000176401.1 2465 2465 1 ENSG00000261823.1 RP11-48G14.1 chr15 56408483 56410186 - lincRNA NOVEL OTTHUMG00000176402.1 1704 839 2 ENSG00000138587.5 MNS1 chr15 56421544 56465137 - protein_coding KNOWN OTTHUMG00000132034.3 43594 2504 16 ENSG00000277245.1 RP11-48G14.3 chr15 56447120 56447697 + antisense NOVEL OTTHUMG00000186901.1 578 578 1 ENSG00000260392.4 RP11-1129I3.1 chr15 56542952 56629592 - sense_overlapping NOVEL OTTHUMG00000172797.2 86641 1510 15 ENSG00000137871.18 ZNF280D chr15 56630181 56918571 - protein_coding KNOWN OTTHUMG00000172509.7 288391 17907 155 ENSG00000276696.1 Y_RNA chr15 56634038 56634167 - misc_RNA NOVEL NA 130 130 1 ENSG00000274667.1 RP11-31H5.3 chr15 56729932 56730611 - sense_intronic NOVEL OTTHUMG00000186904.1 680 680 1 ENSG00000227421.1 RP11-476B1.1 chr1 196044996 196061073 - lincRNA NOVEL OTTHUMG00000035609.1 16078 621 2 ENSG00000279683.1 RP11-31H5.2 chr15 56795382 56795522 + TEC KNOWN OTTHUMG00000176403.1 141 141 1 ENSG00000225625.4 RP11-31H5.1 chr15 56846340 56846605 + processed_pseudogene KNOWN OTTHUMG00000172639.2 266 266 1 ENSG00000276524.1 RP11-323F24.3 chr15 56887107 56888219 + lincRNA NOVEL OTTHUMG00000186905.1 1113 596 2 ENSG00000275343.1 RP11-323F24.4 chr15 56908312 56908635 - sense_intronic NOVEL OTTHUMG00000186906.1 324 324 1 ENSG00000140262.16 TCF12 chr15 56918623 57299281 + protein_coding KNOWN OTTHUMG00000132047.12 380659 9446 244 ENSG00000222586.1 AC010999.1 chr15 56966325 56966397 - miRNA NOVEL NA 73 73 1 ENSG00000260689.2 HNRNPA3P11 chr15 57246960 57247893 - processed_pseudogene KNOWN OTTHUMG00000172640.2 934 934 1 ENSG00000239035.1 snoU13 chr15 57278570 57278673 - snoRNA NOVEL NA 104 104 1 ENSG00000247982.5 LINC00926 chr15 57300365 57307769 + lincRNA NOVEL OTTHUMG00000172641.2 7405 3669 9 ENSG00000260172.1 LINC01413 chr15 57319138 57323908 + lincRNA NOVEL OTTHUMG00000176406.1 4771 772 4 ENSG00000162687.15 KCNT2 chr1 196225779 196609225 - protein_coding KNOWN OTTHUMG00000035611.3 383447 7100 158 ENSG00000260870.1 RP11-358M11.4 chr15 57325472 57326447 - processed_pseudogene KNOWN OTTHUMG00000176412.1 976 521 2 ENSG00000128849.10 CGNL1 chr15 57375967 57550727 + protein_coding KNOWN OTTHUMG00000166485.3 174761 8663 30 ENSG00000252984.1 RNU6-844P chr15 57405074 57405175 - snRNA KNOWN NA 102 102 1 ENSG00000261489.1 CTD-2515H24.3 chr15 57477484 57478329 - lincRNA NOVEL OTTHUMG00000176407.1 846 255 2 ENSG00000261265.1 CTD-2515H24.4 chr15 57527187 57529009 - lincRNA NOVEL OTTHUMG00000176408.1 1823 800 2 ENSG00000276772.1 CTD-2515H24.2 chr15 57553955 57555680 + lincRNA NOVEL OTTHUMG00000173069.1 1726 1726 1 ENSG00000240874.1 CTD-2515H24.1 chr15 57555951 57556379 - processed_pseudogene KNOWN OTTHUMG00000157937.1 429 429 1 ENSG00000137878.15 GCOM1 chr15 57591908 57714745 + protein_coding KNOWN OTTHUMG00000176411.4 122838 6909 172 ENSG00000263155.4 MYZAP chr15 57591941 57685364 + protein_coding KNOWN OTTHUMG00000132453.6 93424 2561 36 ENSG00000255529.6 POLR2M chr15 57706629 57782762 + protein_coding KNOWN OTTHUMG00000166486.3 76134 6574 29 ENSG00000276830.1 MIR6730 chr1 12578957 12579023 - miRNA KNOWN NA 67 67 1 ENSG00000265986.1 MIR4735 chr1 196582413 196582481 - miRNA KNOWN NA 69 69 1 ENSG00000261219.1 RP11-344A16.2 chr15 57720295 57720928 + lincRNA NOVEL OTTHUMG00000176410.1 634 634 1 ENSG00000128918.13 ALDH1A2 chr15 57953424 58497866 - protein_coding KNOWN OTTHUMG00000132624.3 544443 8622 151 ENSG00000259477.1 RP11-86K22.1 chr15 57979716 57980646 - processed_pseudogene KNOWN OTTHUMG00000172005.1 931 931 1 ENSG00000274719.1 RP11-86K22.2 chr15 57990217 57990636 - sense_intronic NOVEL OTTHUMG00000186908.1 420 420 1 ENSG00000259285.1 CTD-2330J20.2 chr15 58065225 58071043 + antisense NOVEL OTTHUMG00000172006.1 5819 874 3 ENSG00000103569.8 AQP9 chr15 58138169 58185911 + protein_coding KNOWN OTTHUMG00000132631.2 47743 3235 21 ENSG00000259651.2 CTD-2330J20.1 chr15 58150275 58150563 + processed_pseudogene KNOWN OTTHUMG00000171994.2 289 289 1 ENSG00000259626.2 RP11-925D8.2 chr15 58150635 58150962 + processed_pseudogene KNOWN OTTHUMG00000171995.2 328 328 1 ENSG00000259600.2 RP11-925D8.3 chr15 58151033 58152513 + processed_pseudogene KNOWN OTTHUMG00000171996.2 1481 1481 1 ENSG00000259379.1 RP11-925D8.5 chr15 58152606 58154407 + processed_pseudogene KNOWN OTTHUMG00000171998.1 1802 1802 1 ENSG00000000971.14 CFH chr1 196651878 196747504 + protein_coding KNOWN OTTHUMG00000035607.5 95627 8145 62 ENSG00000259671.1 RP11-925D8.6 chr15 58154960 58156061 + processed_pseudogene KNOWN OTTHUMG00000171999.1 1102 1102 1 ENSG00000240934.2 RP11-925D8.1 chr15 58200606 58201018 + processed_pseudogene KNOWN OTTHUMG00000157940.2 413 413 1 ENSG00000166035.9 LIPC chr15 58410569 58569843 + protein_coding KNOWN OTTHUMG00000132632.3 159275 5184 52 ENSG00000259293.1 RP11-355N15.1 chr15 58434890 58498735 - antisense NOVEL OTTHUMG00000171977.1 63846 2231 3 ENSG00000277229.1 RP11-355N15.3 chr15 58454327 58454982 + sense_intronic NOVEL OTTHUMG00000186909.1 656 656 1 ENSG00000277790.1 RP11-355N15.2 chr15 58456188 58456348 + sense_intronic NOVEL OTTHUMG00000186910.1 161 161 1 ENSG00000259476.1 RP11-50C13.2 chr15 58521311 58523371 + sense_intronic NOVEL OTTHUMG00000171978.1 2061 1757 2 ENSG00000259250.1 RP11-50C13.1 chr15 58587507 58591676 + antisense NOVEL OTTHUMG00000171979.1 4170 542 2 ENSG00000137845.13 ADAM10 chr15 58588807 58749978 - protein_coding KNOWN OTTHUMG00000132633.9 161172 16168 85 ENSG00000270986.1 RP11-123C21.2 chr15 58672296 58672933 + processed_pseudogene KNOWN OTTHUMG00000184879.1 638 638 1 ENSG00000116785.12 CFHR3 chr1 196774795 196795406 + protein_coding KNOWN OTTHUMG00000035929.7 20612 3774 30 ENSG00000182625.3 RP11-123C21.1 chr15 58686411 58686617 + processed_pseudogene KNOWN OTTHUMG00000171980.1 207 207 1 ENSG00000199730.1 RN7SKP95 chr15 58703852 58704154 - misc_RNA KNOWN NA 303 303 1 ENSG00000278513.1 RP11-123C21.3 chr15 58732188 58733149 + unprocessed_pseudogene KNOWN OTTHUMG00000187862.1 962 665 2 ENSG00000259173.2 RP11-30K9.7 chr15 58755625 58756247 - processed_pseudogene KNOWN OTTHUMG00000171981.2 623 315 2 ENSG00000200318.2 U3 chr15 58760466 58760681 - snoRNA NOVEL NA 216 216 1 ENSG00000245975.2 RP11-30K9.6 chr15 58768072 58770974 - lincRNA NOVEL OTTHUMG00000171982.1 2903 1396 2 ENSG00000128923.9 FAM63B chr15 58771192 58861900 + protein_coding KNOWN OTTHUMG00000171983.2 90709 9454 40 ENSG00000259402.1 RP11-30K9.4 chr15 58815272 58817728 + sense_intronic NOVEL OTTHUMG00000171984.1 2457 526 2 ENSG00000259353.1 RP11-30K9.5 chr15 58856831 58865063 - antisense NOVEL OTTHUMG00000171985.1 8233 450 2 ENSG00000259738.1 ZNF444P1 chr15 58865006 58865303 + processed_pseudogene KNOWN OTTHUMG00000171986.1 298 298 1 ENSG00000276911.1 CFHR2 chr1 196819745 196959210 + protein_coding NOVEL OTTHUMG00000186748.1 139466 1043 5 ENSG00000157450.14 RNF111 chr15 58865175 59097419 + protein_coding KNOWN OTTHUMG00000132716.2 232245 7181 80 ENSG00000242747.1 RP11-30K9.1 chr15 58869659 58870134 + processed_pseudogene KNOWN OTTHUMG00000157941.1 476 476 1 ENSG00000137776.15 SLTM chr15 58879045 58933653 - protein_coding KNOWN OTTHUMG00000074033.3 54609 8157 179 ENSG00000225798.1 AC025918.2 chr15 58889967 58894082 + antisense NOVEL OTTHUMG00000074032.1 4116 383 2 ENSG00000278439.1 AC025918.1 chr15 58892507 58892590 + miRNA NOVEL NA 84 84 1 ENSG00000259393.2 RP11-313H3.1 chr15 58967046 58967808 - processed_pseudogene KNOWN OTTHUMG00000171952.2 763 763 1 ENSG00000241640.2 RP11-59H7.1 chr15 59049399 59050385 - processed_pseudogene KNOWN OTTHUMG00000157944.3 987 467 2 ENSG00000157456.6 CCNB2 chr15 59105078 59125045 + protein_coding KNOWN OTTHUMG00000132715.2 19968 2801 29 ENSG00000277144.1 RP11-59H7.4 chr15 59115547 59116089 - lincRNA NOVEL OTTHUMG00000186912.1 543 543 1 ENSG00000259732.1 RP11-59H7.3 chr15 59121034 59133250 + sense_overlapping NOVEL OTTHUMG00000171943.1 12217 633 2 ENSG00000244414.5 CFHR1 chr1 196819757 196832189 + protein_coding KNOWN OTTHUMG00000036276.4 12433 2197 18 ENSG00000157483.7 MYO1E chr15 59132434 59372900 - protein_coding KNOWN OTTHUMG00000171944.2 240467 9106 76 ENSG00000253030.1 MIR2116 chr15 59171183 59171262 - miRNA KNOWN NA 80 80 1 ENSG00000171989.5 LDHAL6B chr15 59206823 59208515 + protein_coding KNOWN OTTHUMG00000132714.1 1693 1693 1 ENSG00000200070.1 RNU4-80P chr15 59212648 59212788 - snRNA KNOWN NA 141 141 1 ENSG00000259771.1 RP11-429D19.1 chr15 59266720 59271162 - sense_intronic NOVEL OTTHUMG00000171945.1 4443 448 2 ENSG00000199512.1 RNU6-212P chr15 59341314 59341417 - snRNA KNOWN NA 104 104 1 ENSG00000259735.1 RP11-356M20.3 chr15 59348648 59359889 - sense_intronic NOVEL OTTHUMG00000171946.1 11242 497 2 ENSG00000157470.10 FAM81A chr15 59372693 59523549 + protein_coding KNOWN OTTHUMG00000171915.1 150857 5578 65 ENSG00000259750.1 RP11-356M20.2 chr15 59401221 59402004 - processed_pseudogene KNOWN OTTHUMG00000171922.1 784 784 1 ENSG00000259674.1 RP11-356M20.1 chr15 59406963 59408154 - processed_pseudogene KNOWN OTTHUMG00000171923.1 1192 802 2 ENSG00000134365.11 CFHR4 chr1 196850241 196918972 + protein_coding KNOWN OTTHUMG00000036647.2 68732 2912 29 ENSG00000200252.1 Y_RNA chr15 59408905 59409015 + misc_RNA NOVEL NA 111 111 1 ENSG00000243780.1 RP11-112N19.1 chr15 59525422 59525881 - processed_pseudogene KNOWN OTTHUMG00000157948.1 460 460 1 ENSG00000240238.1 RP11-112N19.2 chr15 59552615 59553093 - processed_pseudogene KNOWN OTTHUMG00000157949.1 479 479 1 ENSG00000201704.1 RNA5SP396 chr15 59574103 59574222 - rRNA KNOWN NA 120 120 1 ENSG00000140297.11 GCNT3 chr15 59594875 59640239 + protein_coding KNOWN OTTHUMG00000132726.3 45365 6475 36 ENSG00000140307.9 GTF2A2 chr15 59638062 59657541 - protein_coding KNOWN OTTHUMG00000132725.3 19480 3204 39 ENSG00000227161.1 AC092755.4 chr15 59644298 59672302 - sense_overlapping NOVEL OTTHUMG00000152880.1 28005 97 2 ENSG00000140299.10 BNIP2 chr15 59659146 59689534 - protein_coding KNOWN OTTHUMG00000132727.5 30389 7969 82 ENSG00000259657.1 PIGHP1 chr15 59676757 59677321 + processed_pseudogene KNOWN OTTHUMG00000171924.1 565 565 1 ENSG00000259238.1 RP11-361D15.2 chr15 59688517 59689418 + antisense NOVEL OTTHUMG00000171925.1 902 402 2 ENSG00000080910.10 CFHR2 chr1 196943772 196959226 + protein_coding KNOWN OTTHUMG00000036518.2 15455 1087 23 ENSG00000234797.5 RPS3AP6 chr15 59768352 59769146 + processed_pseudogene KNOWN OTTHUMG00000157954.1 795 795 1 ENSG00000259601.2 RP11-568G20.2 chr15 59871511 59873495 - processed_pseudogene KNOWN OTTHUMG00000172009.2 1985 1985 1 ENSG00000259573.1 NMNAT1P5 chr15 59964942 59966084 + processed_pseudogene KNOWN OTTHUMG00000172010.1 1143 841 2 ENSG00000171956.6 FOXB1 chr15 60004222 60061730 + protein_coding KNOWN OTTHUMG00000172011.2 57509 3615 8 ENSG00000259558.1 MESTP2 chr15 60053204 60054092 - processed_pseudogene KNOWN OTTHUMG00000172012.1 889 889 1 ENSG00000259223.2 RP11-82L7.4 chr15 60073554 60118320 - lincRNA NOVEL OTTHUMG00000172013.2 44767 757 3 ENSG00000182718.15 ANXA2 chr15 60347134 60402883 - protein_coding KNOWN OTTHUMG00000132763.3 55750 8824 287 ENSG00000240163.1 RP11-745A24.1 chr15 60390371 60390682 + processed_pseudogene KNOWN OTTHUMG00000157957.1 312 312 1 ENSG00000242667.1 RP11-745A24.2 chr15 60404463 60404960 + processed_pseudogene KNOWN OTTHUMG00000157960.1 498 498 1 ENSG00000273721.1 RP11-745A24.3 chr15 60409234 60409420 - unprocessed_pseudogene KNOWN OTTHUMG00000187863.1 187 187 1 ENSG00000273844.1 RP4-608O15.4 chr1 196970495 196970671 + unprocessed_pseudogene KNOWN OTTHUMG00000187545.1 177 177 1 ENSG00000128915.10 ICE2 chr15 60419609 60479160 - protein_coding KNOWN OTTHUMG00000132764.2 59552 16010 110 ENSG00000245534.5 RORA-AS1 chr15 60479178 60630637 + antisense NOVEL OTTHUMG00000172103.2 151460 2036 28 ENSG00000069667.14 RORA chr15 60488284 61229319 - protein_coding KNOWN OTTHUMG00000132769.6 741036 17040 78 ENSG00000259274.1 CTD-2501E16.2 chr15 60529973 60545159 + antisense NOVEL OTTHUMG00000172104.1 15187 434 2 ENSG00000259513.1 CYCSP38 chr15 60558080 60558401 + transcribed_processed_pseudogene KNOWN OTTHUMG00000172105.2 322 322 1 ENSG00000273958.1 RP11-219B17.3 chr15 60593027 60593460 + lincRNA NOVEL OTTHUMG00000186916.1 434 434 1 ENSG00000277413.1 uc_338 chr15 60677109 60677272 - misc_RNA NOVEL NA 164 164 1 ENSG00000259482.1 RORA-AS2 chr15 60681569 60686888 + antisense NOVEL OTTHUMG00000172106.1 5320 664 5 ENSG00000212625.1 RNA5SP397 chr15 60736769 60736886 + rRNA KNOWN NA 118 118 1 ENSG00000259591.1 RP11-554D20.1 chr15 60763906 60765625 + antisense NOVEL OTTHUMG00000172107.1 1720 982 4 ENSG00000134389.9 CFHR5 chr1 196977556 197009674 + protein_coding KNOWN OTTHUMG00000036517.2 32119 2810 10 ENSG00000273792.1 RP11-554D20.2 chr15 60847757 60849068 - sense_intronic NOVEL OTTHUMG00000186917.1 1312 1312 1 ENSG00000259481.1 RP11-39M21.1 chr15 61181249 61195938 + antisense NOVEL OTTHUMG00000172108.1 14690 476 4 ENSG00000259575.1 RP11-39M21.2 chr15 61211913 61214231 + antisense NOVEL OTTHUMG00000172109.1 2319 481 2 ENSG00000276473.1 CTD-2026J24.1 chr15 61239906 61240331 + lincRNA NOVEL OTTHUMG00000186918.1 426 426 1 ENSG00000259616.2 RP11-507B12.2 chr15 61298791 61635449 - lincRNA NOVEL OTTHUMG00000172469.2 336659 1985 5 ENSG00000259530.1 RP11-259A24.1 chr15 61598514 61605241 + lincRNA NOVEL OTTHUMG00000171938.1 6728 925 2 ENSG00000259675.1 RP11-507B12.1 chr15 61639349 61715171 - lincRNA NOVEL OTTHUMG00000171939.1 75823 434 4 ENSG00000271195.1 RP11-162I7.2 chr15 61674767 61675212 + processed_pseudogene KNOWN OTTHUMG00000184881.1 446 446 1 ENSG00000259284.1 RP11-162I7.1 chr15 61729850 61731389 + lincRNA NOVEL OTTHUMG00000171940.2 1540 963 2 ENSG00000266349.1 AC018618.1 chr15 61743941 61744019 + miRNA NOVEL NA 79 79 1 ENSG00000143278.3 F13B chr1 197039191 197067267 - protein_coding KNOWN OTTHUMG00000036519.2 28077 2450 15 ENSG00000259564.1 RP11-16B9.1 chr15 61834752 61852152 + antisense NOVEL OTTHUMG00000172485.1 17401 399 3 ENSG00000129003.14 VPS13C chr15 61852389 62060473 - protein_coding KNOWN OTTHUMG00000132801.3 208085 18992 359 ENSG00000273653.1 AC104590.1 chr15 62045225 62045319 - miRNA NOVEL NA 95 95 1 ENSG00000259251.2 RP11-643M14.1 chr15 62060503 62062434 + antisense NOVEL OTTHUMG00000171941.2 1932 1932 3 ENSG00000198535.5 C2CD4A chr15 62066977 62070917 + protein_coding KNOWN OTTHUMG00000171942.2 3941 3445 2 ENSG00000259466.1 NPM1P47 chr15 62082450 62083305 - processed_pseudogene KNOWN OTTHUMG00000171958.1 856 856 1 ENSG00000205502.3 C2CD4B chr15 62163535 62165283 - protein_coding KNOWN OTTHUMG00000171959.1 1749 1579 2 ENSG00000259697.1 RP11-299H22.1 chr15 62196145 62203318 - lincRNA NOVEL OTTHUMG00000171960.1 7174 2369 4 ENSG00000166104.13 RP11-299H22.3 chr15 62227896 62253235 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000173101.1 25340 3896 35 ENSG00000259878.1 RP11-1O10.1 chr15 62230384 62231895 - lincRNA NOVEL OTTHUMG00000173102.1 1512 564 4 ENSG00000272482.1 RP11-474O21.5 chr1 12618900 12619244 - lincRNA NOVEL OTTHUMG00000185309.1 345 345 1 ENSG00000066279.15 ASPM chr1 197084128 197146694 - protein_coding KNOWN OTTHUMG00000036277.1 62567 10938 90 ENSG00000221141.1 AC126323.1 chr15 62243366 62243448 - miRNA NOVEL NA 83 83 1 ENSG00000276713.1 Metazoa_SRP chr15 62244330 62244595 - misc_RNA NOVEL NA 266 266 1 ENSG00000277779.1 AC126323.2 chr15 62246284 62246349 - miRNA NOVEL NA 66 66 1 ENSG00000260062.3 GOLGA2P11 chr15 62253730 62270680 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000173103.1 16951 5272 21 ENSG00000260375.1 RP11-299H22.4 chr15 62255686 62256421 - unprocessed_pseudogene KNOWN OTTHUMG00000173104.1 736 234 3 ENSG00000261296.1 RP11-299H22.6 chr15 62274163 62278365 + lincRNA NOVEL OTTHUMG00000173105.1 4203 3624 4 ENSG00000260957.1 RP11-299H22.7 chr15 62284190 62285006 + lincRNA NOVEL OTTHUMG00000173106.1 817 592 2 ENSG00000277919.1 MIR8067 chr15 62304658 62304734 - miRNA KNOWN NA 77 77 1 ENSG00000275451.1 MIR6085 chr15 62343029 62343138 + miRNA KNOWN NA 110 110 1 ENSG00000259557.2 HMGN1P26 chr15 62362029 62362331 - processed_pseudogene KNOWN OTTHUMG00000171962.2 303 303 1 ENSG00000235748.1 RP11-32D17.4 chr1 197138748 197139307 - processed_pseudogene KNOWN OTTHUMG00000057657.1 560 560 1 ENSG00000274340.1 RP11-435J9.2 chr15 62387327 62388875 - lincRNA NOVEL OTTHUMG00000172312.1 1549 1549 1 ENSG00000171914.13 TLN2 chr15 62390526 62844631 + protein_coding KNOWN OTTHUMG00000133679.4 454106 16202 202 ENSG00000259458.1 MGC15885 chr15 62637172 62645291 - antisense NOVEL OTTHUMG00000172037.1 8120 2425 6 ENSG00000259756.1 RP11-625H11.2 chr15 62682916 62690448 - antisense NOVEL OTTHUMG00000172038.1 7533 577 4 ENSG00000265317.1 AC103740.1 chr15 62786807 62786894 + miRNA NOVEL NA 88 88 1 ENSG00000211137.1 MIR190A chr15 62823957 62824041 + miRNA KNOWN NA 85 85 1 ENSG00000259370.2 RP11-1069G10.1 chr15 62827675 62884034 - antisense NOVEL OTTHUMG00000172039.2 56360 8535 12 ENSG00000259727.1 RP11-1069G10.2 chr15 62895812 62899543 + lincRNA NOVEL OTTHUMG00000172040.1 3732 1225 2 ENSG00000259394.2 RP11-244F12.1 chr15 62953173 62954124 + processed_pseudogene KNOWN OTTHUMG00000172145.2 952 952 1 ENSG00000140416.18 TPM1 chr15 63042632 63071915 + protein_coding KNOWN OTTHUMG00000132803.7 29284 12492 210 ENSG00000177888.7 ZBTB41 chr1 197153680 197200542 - protein_coding KNOWN OTTHUMG00000036275.2 46863 8562 21 ENSG00000259498.1 RP11-244F12.3 chr15 63046034 63049387 - antisense NOVEL OTTHUMG00000172299.1 3354 3354 3 ENSG00000259627.1 RP11-244F12.2 chr15 63070025 63071911 - antisense NOVEL OTTHUMG00000172146.1 1887 691 2 ENSG00000259672.1 RP11-69G7.1 chr15 63098870 63110403 + lincRNA NOVEL OTTHUMG00000172300.1 11534 658 4 ENSG00000103642.10 LACTB chr15 63121800 63142061 + protein_coding KNOWN OTTHUMG00000132807.4 20262 3972 16 ENSG00000185088.11 RPS27L chr15 63125872 63158021 - protein_coding KNOWN OTTHUMG00000155301.5 32150 9127 22 ENSG00000166128.11 RAB8B chr15 63189469 63267782 + protein_coding KNOWN OTTHUMG00000132862.2 78314 5200 40 ENSG00000138613.12 APH1B chr15 63276018 63309126 + protein_coding KNOWN OTTHUMG00000132863.3 33109 5494 44 ENSG00000074410.12 CA12 chr15 63321378 63382161 - protein_coding KNOWN OTTHUMG00000132881.2 60784 7313 38 ENSG00000259459.4 RP11-321G12.1 chr15 63390136 63438320 + lincRNA NOVEL OTTHUMG00000172301.2 48185 2230 13 ENSG00000259268.1 AC007950.1 chr15 63456294 63469351 - lincRNA NOVEL OTTHUMG00000172302.1 13058 615 3 ENSG00000237861.1 RP11-332L8.1 chr1 197222222 197223255 + processed_pseudogene KNOWN OTTHUMG00000035660.1 1034 1034 1 ENSG00000276651.1 AC007950.2 chr15 63500737 63503083 - lincRNA NOVEL OTTHUMG00000173093.1 2347 2347 1 ENSG00000140455.15 USP3 chr15 63504511 63594640 + protein_coding KNOWN OTTHUMG00000172309.2 90130 7764 188 ENSG00000259248.4 USP3-AS1 chr15 63544247 63601589 - antisense NOVEL OTTHUMG00000172432.2 57343 3624 34 ENSG00000197361.6 FBXL22 chr15 63597353 63602428 + protein_coding KNOWN OTTHUMG00000132905.5 5076 3614 7 ENSG00000103657.12 HERC1 chr15 63608618 63833942 - protein_coding KNOWN OTTHUMG00000172433.3 225325 17053 136 ENSG00000259589.2 RP11-317G6.1 chr15 63675146 63713758 + antisense NOVEL OTTHUMG00000172434.2 38613 580 4 ENSG00000199156.1 MIR422A chr15 63870930 63871019 - miRNA KNOWN NA 90 90 1 ENSG00000275785.1 RP11-111E14.2 chr15 63890030 63890317 + unprocessed_pseudogene KNOWN OTTHUMG00000187864.1 288 288 1 ENSG00000035664.10 DAPK2 chr15 63907036 64072033 - protein_coding KNOWN OTTHUMG00000132947.4 164998 13612 89 ENSG00000259351.1 RP11-111E14.1 chr15 63928274 63935953 + antisense NOVEL OTTHUMG00000172435.1 7680 1072 4 ENSG00000134376.13 CRB1 chr1 197268204 197478455 + protein_coding KNOWN OTTHUMG00000035663.6 210252 12721 74 ENSG00000166797.9 FAM96A chr15 64072559 64094018 - protein_coding KNOWN OTTHUMG00000132961.2 21460 2427 24 ENSG00000028528.13 SNX1 chr15 64094123 64146090 + protein_coding KNOWN OTTHUMG00000172436.3 51968 9780 112 ENSG00000201071.1 Y_RNA chr15 64111458 64111569 - misc_RNA NOVEL NA 112 112 1 ENSG00000157734.12 SNX22 chr15 64151715 64157481 + protein_coding KNOWN OTTHUMG00000132965.4 5767 5767 36 ENSG00000166794.4 PPIB chr15 64155812 64163205 - protein_coding KNOWN OTTHUMG00000133018.2 7394 1911 11 ENSG00000169118.14 CSNK1G1 chr15 64165517 64356187 - protein_coding KNOWN OTTHUMG00000133019.2 190671 8358 38 ENSG00000259316.6 CTD-2116N17.1 chr15 64180348 64373781 - protein_coding KNOWN OTTHUMG00000172470.3 193434 2732 29 ENSG00000252774.1 SNORA48 chr15 64342539 64342698 + snoRNA NOVEL NA 160 160 1 ENSG00000166803.9 KIAA0101 chr15 64364311 64387687 - protein_coding KNOWN OTTHUMG00000133017.4 23377 3734 30 ENSG00000103671.8 TRIP4 chr15 64387748 64455303 + protein_coding KNOWN OTTHUMG00000133033.3 67556 3135 66 ENSG00000221879.3 MRPS21P3 chr1 197363817 197364078 + processed_pseudogene KNOWN OTTHUMG00000035662.2 262 262 1 ENSG00000206781.1 Y_RNA chr15 64445130 64445243 - misc_RNA NOVEL NA 114 114 1 ENSG00000180357.8 ZNF609 chr15 64460742 64686068 + protein_coding KNOWN OTTHUMG00000172370.6 225327 12112 18 ENSG00000259682.1 RP11-702L15.4 chr15 64470253 64471364 + sense_intronic NOVEL OTTHUMG00000172472.1 1112 391 2 ENSG00000248415.1 GAPDHP61 chr15 64528667 64529671 - processed_pseudogene KNOWN OTTHUMG00000160045.1 1005 1005 1 ENSG00000243403.1 RP11-330L19.1 chr15 64592979 64593326 + processed_pseudogene KNOWN OTTHUMG00000157969.1 348 348 1 ENSG00000239465.1 RP11-330L19.2 chr15 64631109 64631914 - processed_pseudogene KNOWN OTTHUMG00000157972.1 806 485 2 ENSG00000207223.1 Y_RNA chr15 64652888 64652989 + misc_RNA NOVEL NA 102 102 1 ENSG00000207162.1 RNU6-549P chr15 64671263 64671369 + snRNA KNOWN NA 107 107 1 ENSG00000180304.13 OAZ2 chr15 64687573 64703281 - protein_coding KNOWN OTTHUMG00000172473.3 15709 7671 37 ENSG00000265967.1 AC100830.4 chr15 64695041 64695594 + antisense NOVEL OTTHUMG00000178466.1 554 554 1 ENSG00000230260.1 RP11-75C23.1 chr1 197437976 197447469 - antisense NOVEL OTTHUMG00000141312.1 9494 548 4 ENSG00000264937.1 AC100830.5 chr15 64696622 64696861 + antisense NOVEL OTTHUMG00000178467.1 240 240 1 ENSG00000259635.1 AC100830.3 chr15 64701248 64719602 + antisense NOVEL OTTHUMG00000172475.1 18355 1609 2 ENSG00000166831.7 RBPMS2 chr15 64739892 64775587 - protein_coding KNOWN OTTHUMG00000172423.2 35696 2101 16 ENSG00000221033.1 MIR1272 chr15 64762387 64762515 - miRNA KNOWN NA 129 129 1 ENSG00000140451.11 PIF1 chr15 64815632 64825668 - protein_coding KNOWN OTTHUMG00000132974.3 10037 4656 57 ENSG00000249240.2 AC069368.3 chr15 64841883 64930920 + protein_coding NOVEL OTTHUMG00000161678.1 89038 1277 13 ENSG00000241839.8 PLEKHO2 chr15 64841883 64868007 + protein_coding KNOWN OTTHUMG00000133050.3 26125 3726 11 ENSG00000166839.15 ANKDD1A chr15 64911902 64958700 + protein_coding KNOWN OTTHUMG00000133051.8 46799 5042 86 ENSG00000275332.1 CTD-2017F17.1 chr15 64943240 64943672 - antisense NOVEL OTTHUMG00000188434.1 433 433 1 ENSG00000274383.1 CTD-2017F17.2 chr15 64950916 64951435 - antisense NOVEL OTTHUMG00000188435.1 520 520 1 ENSG00000213047.10 DENND1B chr1 197504748 197775696 - protein_coding KNOWN OTTHUMG00000035653.4 270949 13203 115 ENSG00000090487.9 SPG21 chr15 64963021 64990310 - protein_coding KNOWN OTTHUMG00000133098.5 27290 3984 78 ENSG00000103707.8 MTFMT chr15 65001512 65029639 - protein_coding KNOWN OTTHUMG00000172371.3 28128 3432 40 ENSG00000270218.1 RP11-325L12.5 chr15 65026088 65026676 + processed_pseudogene KNOWN OTTHUMG00000184884.1 589 589 1 ENSG00000186198.3 SLC51B chr15 65045370 65053396 + protein_coding KNOWN OTTHUMG00000133116.1 8027 940 4 ENSG00000277351.1 RP11-325L12.6 chr15 65049188 65049802 - antisense NOVEL OTTHUMG00000186924.1 615 615 1 ENSG00000103710.9 RASL12 chr15 65053337 65076690 - protein_coding KNOWN OTTHUMG00000133115.3 23354 2802 14 ENSG00000234438.3 KBTBD13 chr15 65076816 65078192 + protein_coding KNOWN OTTHUMG00000172424.2 1377 1377 1 ENSG00000281328.1 AC013553.1 chr15 65077894 65078008 - miRNA NOVEL NA 115 115 1 ENSG00000278737.1 RP11-325L12.7 chr15 65083042 65083663 - lincRNA NOVEL OTTHUMG00000186925.1 622 622 1 ENSG00000246922.7 UBAP1L chr15 65092770 65115197 - protein_coding KNOWN OTTHUMG00000172425.2 22428 8536 17 ENSG00000207139.1 Y_RNA chr1 197685640 197685740 - misc_RNA NOVEL NA 101 101 1 ENSG00000259258.1 RP11-325L12.3 chr15 65105534 65105800 + processed_pseudogene KNOWN OTTHUMG00000172426.1 267 267 1 ENSG00000090470.13 PDCD7 chr15 65117379 65133836 - protein_coding KNOWN OTTHUMG00000133117.3 16458 3263 10 ENSG00000166855.8 CLPX chr15 65148219 65185342 - protein_coding KNOWN OTTHUMG00000133139.3 37124 5461 45 ENSG00000138615.5 CILP chr15 65194758 65211488 - protein_coding KNOWN OTTHUMG00000133140.2 16731 5695 9 ENSG00000279268.1 RP11-628M2.1 chr15 65226472 65226697 - TEC KNOWN OTTHUMG00000173058.1 226 226 1 ENSG00000201709.1 RNU6-686P chr15 65229861 65229967 + snRNA KNOWN NA 107 107 1 ENSG00000138617.13 PARP16 chr15 65234460 65300618 - protein_coding KNOWN OTTHUMG00000133138.5 66159 3715 23 ENSG00000206903.1 SNORA24 chr15 65285461 65285591 - snoRNA NOVEL NA 131 131 1 ENSG00000199568.1 RNU5A-1 chr15 65296051 65296166 + snRNA KNOWN NA 116 116 1 ENSG00000259346.2 RP11-349G13.2 chr15 65301922 65302311 + processed_pseudogene KNOWN OTTHUMG00000172427.2 390 390 1 ENSG00000213046.4 EEF1A1P32 chr1 197688760 197690627 + unprocessed_pseudogene KNOWN OTTHUMG00000035652.2 1868 1347 3 ENSG00000200156.1 RNU5B-1 chr15 65304677 65304792 + snRNA KNOWN NA 116 116 1 ENSG00000174498.12 IGDCC3 chr15 65327127 65378040 - protein_coding KNOWN OTTHUMG00000133137.2 50914 5552 37 ENSG00000103742.10 IGDCC4 chr15 65381464 65423072 - protein_coding KNOWN OTTHUMG00000133136.4 41609 7764 43 ENSG00000074603.17 DPP8 chr15 65442463 65517704 - protein_coding KNOWN OTTHUMG00000133150.3 75242 10211 162 ENSG00000270690.1 RP11-349G13.3 chr15 65458574 65459534 + processed_pseudogene KNOWN OTTHUMG00000184887.1 961 485 2 ENSG00000259232.2 RP11-349G13.1 chr15 65475318 65475614 - processed_pseudogene KNOWN OTTHUMG00000172428.2 297 297 1 ENSG00000252217.1 Y_RNA chr15 65502741 65502836 + misc_RNA NOVEL NA 96 96 1 ENSG00000074696.11 PTPLAD1 chr15 65530418 65578352 + protein_coding KNOWN OTTHUMG00000172658.8 47935 7097 103 ENSG00000207449.1 RNU6-19P chr15 65553081 65553187 - snRNA KNOWN NA 107 107 1 ENSG00000138614.13 VWA9 chr15 65578753 65611289 - protein_coding KNOWN OTTHUMG00000133159.10 32537 4210 116 ENSG00000204518.2 AADACL4 chr1 12644547 12667086 + protein_coding KNOWN OTTHUMG00000001889.1 22540 1575 4 ENSG00000235582.2 RP11-448G4.2 chr1 197735636 197736107 + processed_pseudogene KNOWN OTTHUMG00000035651.2 472 472 1 ENSG00000074621.12 SLC24A1 chr15 65611366 65660995 + protein_coding KNOWN OTTHUMG00000167960.4 49630 9084 78 ENSG00000275638.1 RP11-16E23.5 chr15 65655620 65656085 - antisense NOVEL OTTHUMG00000186934.1 466 466 1 ENSG00000174485.13 DENND4A chr15 65658046 65792293 - protein_coding KNOWN OTTHUMG00000172635.4 134248 10593 112 ENSG00000238311.1 snoU13 chr15 65696833 65696936 - snoRNA NOVEL NA 104 104 1 ENSG00000264737.1 MIR4511 chr15 65719246 65719332 - miRNA KNOWN NA 87 87 1 ENSG00000103769.8 RAB11A chr15 65726054 65891991 + protein_coding KNOWN OTTHUMG00000133162.6 165938 5682 39 ENSG00000261544.1 RP11-16E23.3 chr15 65766460 65767398 - sense_intronic NOVEL OTTHUMG00000172636.1 939 428 2 ENSG00000259924.1 RP11-16E23.4 chr15 65771176 65772139 - processed_pseudogene KNOWN OTTHUMG00000172642.1 964 964 1 ENSG00000249271.2 HNRNPA1P44 chr15 65816302 65817481 - processed_pseudogene KNOWN OTTHUMG00000172813.2 1180 879 2 ENSG00000281318.1 AC084854.1 chr15 65877849 65877983 + miRNA NOVEL NA 135 135 1 ENSG00000233040.2 FAM204BP chr1 197746751 197747451 - processed_pseudogene KNOWN OTTHUMG00000035650.2 701 701 1 ENSG00000157890.16 MEGF11 chr15 65895079 66253747 - protein_coding KNOWN OTTHUMG00000133175.4 358669 9828 153 ENSG00000263512.1 MIR4311 chr15 66040233 66040332 + miRNA KNOWN NA 100 100 1 ENSG00000261318.1 RP11-653J6.1 chr15 66278498 66293357 - antisense NOVEL OTTHUMG00000172825.1 14860 578 2 ENSG00000166938.11 DIS3L chr15 66293217 66333898 + protein_coding KNOWN OTTHUMG00000133181.8 40682 5436 112 ENSG00000260773.1 RP11-352G18.2 chr15 66314914 66331703 - antisense NOVEL OTTHUMG00000172826.1 16790 500 2 ENSG00000075131.8 TIPIN chr15 66336206 66386746 - protein_coding KNOWN OTTHUMG00000133188.2 50541 2755 35 ENSG00000252712.1 SCARNA14 chr15 66347207 66347342 - scaRNA KNOWN NA 136 136 1 ENSG00000223271.1 Y_RNA chr15 66348276 66348375 + misc_RNA NOVEL NA 100 100 1 ENSG00000240821.1 RPL9P25 chr15 66379337 66379915 - processed_pseudogene KNOWN OTTHUMG00000157975.1 579 579 1 ENSG00000169032.8 MAP2K1 chr15 66386817 66492312 + protein_coding KNOWN OTTHUMG00000133196.5 105496 3759 23 ENSG00000224901.1 RP11-448G4.4 chr1 197757319 197761965 + antisense NOVEL OTTHUMG00000041185.1 4647 247 2 ENSG00000261102.2 ATP5J2P6 chr15 66414933 66415198 - processed_pseudogene KNOWN OTTHUMG00000172827.2 266 266 1 ENSG00000243404.2 RPL35AP32 chr15 66446455 66446777 - processed_pseudogene KNOWN OTTHUMG00000157977.2 323 323 1 ENSG00000261351.2 CTD-3185P2.1 chr15 66488658 66492109 - antisense NOVEL OTTHUMG00000172828.2 3452 2168 2 ENSG00000174446.11 SNAPC5 chr15 66490135 66497813 - protein_coding KNOWN OTTHUMG00000133195.4 7679 2509 25 ENSG00000266589.1 MIR4512 chr15 66496958 66497034 - miRNA KNOWN NA 77 77 1 ENSG00000174444.13 RPL4 chr15 66498015 66524532 - protein_coding KNOWN OTTHUMG00000133193.3 26518 5637 89 ENSG00000199574.1 SNORD18C chr15 66501250 66501318 - snoRNA KNOWN NA 69 69 1 ENSG00000280554.1 snoU18 chr15 66502019 66502089 - snoRNA NOVEL NA 71 71 1 ENSG00000202529.1 SNORD18B chr15 66502020 66502091 - snoRNA KNOWN NA 72 72 1 ENSG00000199673.1 SNORD16 chr15 66502812 66502910 - snoRNA KNOWN NA 99 99 1 ENSG00000203724.9 C1orf53 chr1 197902647 197907367 + protein_coding KNOWN OTTHUMG00000035659.1 4721 611 9 ENSG00000200623.1 SNORD18A chr15 66503243 66503314 - snoRNA KNOWN NA 72 72 1 ENSG00000174442.10 ZWILCH chr15 66504959 66550128 + protein_coding KNOWN OTTHUMG00000133194.6 45170 4849 130 ENSG00000188501.10 LCTL chr15 66547179 66565979 - protein_coding KNOWN OTTHUMG00000133207.3 18801 3518 41 ENSG00000259471.1 LINC01169 chr15 66582190 66685794 + lincRNA NOVEL OTTHUMG00000172242.1 103605 833 5 ENSG00000137834.13 SMAD6 chr15 66702228 66782848 + protein_coding KNOWN OTTHUMG00000133218.5 80621 8563 17 ENSG00000274995.1 RP11-321F6.2 chr15 66740445 66741151 + sense_intronic NOVEL OTTHUMG00000186938.1 707 707 1 ENSG00000270490.1 RP11-622C24.1 chr15 66808404 66810560 + processed_pseudogene KNOWN OTTHUMG00000184890.1 2157 2157 1 ENSG00000277152.1 RP11-622C24.2 chr15 66860303 66867023 + lincRNA NOVEL OTTHUMG00000186940.1 6721 6721 1 ENSG00000259437.1 RP11-798K3.4 chr15 66919811 66931755 + lincRNA NOVEL OTTHUMG00000172296.1 11945 423 2 ENSG00000259289.2 RP11-798K3.3 chr15 66931537 66956518 - lincRNA NOVEL OTTHUMG00000172297.2 24982 719 3 ENSG00000143355.14 LHX9 chr1 197911902 197935478 + protein_coding KNOWN OTTHUMG00000035656.6 23577 10442 34 ENSG00000259347.4 RP11-798K3.2 chr15 66986361 67059253 - lincRNA NOVEL OTTHUMG00000172243.1 72893 1015 9 ENSG00000259246.3 HMGN2P47 chr15 67000777 67001181 - processed_pseudogene KNOWN OTTHUMG00000172244.3 405 405 1 ENSG00000166949.14 SMAD3 chr15 67063763 67195195 + protein_coding KNOWN OTTHUMG00000133230.4 131433 9113 76 ENSG00000259202.1 RP11-342M21.2 chr15 67142734 67146939 - antisense NOVEL OTTHUMG00000172245.1 4206 472 3 ENSG00000103591.11 AAGAB chr15 67201033 67255195 - protein_coding KNOWN OTTHUMG00000172246.2 54163 3833 50 ENSG00000242634.1 RPS24P16 chr15 67232446 67232837 + processed_pseudogene KNOWN OTTHUMG00000157982.1 392 392 1 ENSG00000103599.18 IQCH chr15 67254800 67502260 + protein_coding KNOWN OTTHUMG00000133231.5 247461 7108 110 ENSG00000259673.4 IQCH-AS1 chr15 67403619 67521844 - lincRNA NOVEL OTTHUMG00000172247.1 118226 6732 22 ENSG00000189227.5 C15orf61 chr15 67521068 67530143 + protein_coding KNOWN OTTHUMG00000172248.4 9076 4811 8 ENSG00000270964.1 RP11-502I4.3 chr15 67541072 67542604 - lincRNA NOVEL OTTHUMG00000185153.1 1533 1533 1 ENSG00000151414.13 NEK7 chr1 198156963 198322420 + protein_coding KNOWN OTTHUMG00000035658.5 165458 5485 44 ENSG00000137764.18 MAP2K5 chr15 67542709 67807123 + protein_coding KNOWN OTTHUMG00000133264.6 264415 5031 143 ENSG00000259512.3 HNRNPA1P5 chr15 67627852 67629135 + processed_pseudogene KNOWN OTTHUMG00000172249.3 1284 966 2 ENSG00000188779.9 SKOR1 chr15 67819704 67834561 + protein_coding KNOWN OTTHUMG00000170878.1 14858 4479 42 ENSG00000259410.4 RP11-34F13.3 chr15 67832725 67873866 + processed_transcript NOVEL OTTHUMG00000172250.2 41142 401 5 ENSG00000245719.1 RP11-34F13.2 chr15 67834310 67838879 - lincRNA NOVEL OTTHUMG00000172251.1 4570 1986 3 ENSG00000206625.1 RNU6-1 chr15 67839939 67840045 - snRNA KNOWN NA 107 107 1 ENSG00000261702.2 RP11-282M16.1 chr15 67974391 67974625 - processed_pseudogene KNOWN OTTHUMG00000172683.2 235 235 1 ENSG00000260109.1 RP11-883G10.1 chr15 67985059 67986288 + unprocessed_pseudogene KNOWN OTTHUMG00000172680.1 1230 534 3 ENSG00000033800.12 PIAS1 chr15 68054179 68198603 + protein_coding KNOWN OTTHUMG00000172645.4 144425 10776 53 ENSG00000129007.13 CALML4 chr15 68190705 68206110 - protein_coding KNOWN OTTHUMG00000133287.7 15406 5038 26 ENSG00000232824.1 PRR13P1 chr1 198197779 198198186 - processed_pseudogene KNOWN OTTHUMG00000035654.1 408 408 1 ENSG00000260007.1 RP11-315D16.2 chr15 68193801 68229718 - protein_coding PUTATIVE OTTHUMG00000172656.1 35918 718 3 ENSG00000128973.10 CLN6 chr15 68206992 68257211 - protein_coding KNOWN OTTHUMG00000133286.3 50220 4225 45 ENSG00000264779.1 AC107871.1 chr15 68229672 68229789 + miRNA NOVEL NA 118 118 1 ENSG00000260602.2 HMGN2P40 chr15 68254549 68254939 + processed_pseudogene KNOWN OTTHUMG00000172681.2 391 391 1 ENSG00000260657.2 RP11-315D16.4 chr15 68267792 68277994 - lincRNA NOVEL OTTHUMG00000172682.2 10203 736 4 ENSG00000169018.5 FEM1B chr15 68277803 68295865 + protein_coding KNOWN OTTHUMG00000133285.3 18063 7569 8 ENSG00000137809.15 ITGA11 chr15 68296533 68432162 - protein_coding KNOWN OTTHUMG00000172657.3 135630 10864 81 ENSG00000103647.11 CORO2B chr15 68578969 68727806 + protein_coding KNOWN OTTHUMG00000133288.3 148838 3998 48 ENSG00000271232.1 CARSP1 chr15 68749501 68750691 + processed_pseudogene KNOWN OTTHUMG00000184898.1 1191 889 2 ENSG00000140350.14 ANP32A chr15 68778535 68820897 - protein_coding KNOWN OTTHUMG00000154502.2 42363 7544 48 ENSG00000252731.2 AC093419.1 chr1 198369297 198369385 + miRNA NOVEL NA 89 89 1 ENSG00000265195.1 MIR4312 chr15 68801850 68801925 - miRNA KNOWN NA 76 76 1 ENSG00000258484.3 SPESP1 chr15 68818221 68946811 + protein_coding KNOWN OTTHUMG00000133321.3 128591 1588 6 ENSG00000259286.3 RP11-696L21.2 chr15 68833830 68834749 + processed_pseudogene KNOWN OTTHUMG00000172052.3 920 920 1 ENSG00000137808.12 RP11-809H16.2 chr15 68930504 69028889 + processed_transcript NOVEL OTTHUMG00000171448.2 98386 1117 4 ENSG00000255346.8 NOX5 chr15 68930525 69062743 + protein_coding KNOWN OTTHUMG00000133320.4 132219 12511 118 ENSG00000273851.1 RP11-809H16.3 chr15 69022230 69024176 + transcribed_processed_pseudogene KNOWN OTTHUMG00000188449.1 1947 1947 1 ENSG00000259265.1 RP11-809H16.4 chr15 69037549 69043565 - antisense NOVEL OTTHUMG00000172081.1 6017 872 2 ENSG00000212766.8 EWSAT1 chr15 69072926 69095820 + lincRNA KNOWN OTTHUMG00000133319.4 22895 3576 29 ENSG00000259222.2 RP11-809H16.5 chr15 69080879 69099987 + lincRNA NOVEL OTTHUMG00000172082.2 19109 916 5 ENSG00000281169.1 AC027088.1 chr15 69103820 69103945 + miRNA NOVEL NA 126 126 1 ENSG00000151418.10 ATP6V1G3 chr1 198523222 198540945 - protein_coding KNOWN OTTHUMG00000035661.4 17724 728 16 ENSG00000138604.8 GLCE chr15 69160584 69272217 + protein_coding KNOWN OTTHUMG00000172084.4 111634 6630 13 ENSG00000266374.1 AC026512.1 chr15 69160651 69160724 + miRNA NOVEL NA 74 74 1 ENSG00000265047.3 AC026992.1 chr15 69247109 69247210 + miRNA NOVEL NA 102 102 1 ENSG00000241774.3 RN7SL438P chr15 69250525 69250795 - misc_RNA KNOWN NA 271 271 1 ENSG00000261634.3 RP11-352D13.6 chr15 69278328 69298763 - antisense NOVEL OTTHUMG00000173056.2 20436 4820 7 ENSG00000259504.2 RP11-352D13.5 chr15 69278675 69295322 + lincRNA NOVEL OTTHUMG00000172085.2 16648 883 6 ENSG00000137819.12 PAQR5 chr15 69298947 69407780 + protein_coding KNOWN OTTHUMG00000133322.4 108834 6224 37 ENSG00000221376.1 SNORA77 chr15 69325293 69325420 - snoRNA NOVEL NA 128 128 1 ENSG00000252972.1 RNA5SP398 chr15 69367585 69367681 + rRNA KNOWN NA 97 97 1 ENSG00000259645.1 RP11-253M7.6 chr15 69391192 69392149 + sense_intronic NOVEL OTTHUMG00000172086.1 958 694 2 ENSG00000223881.1 RP11-553K8.2 chr1 198597724 198598868 - lincRNA NOVEL OTTHUMG00000035655.1 1145 363 2 ENSG00000259426.4 RP11-253M7.1 chr15 69396904 69415029 - antisense NOVEL OTTHUMG00000172061.2 18126 2265 7 ENSG00000207395.1 Y_RNA chr15 69406441 69406552 + misc_RNA NOVEL NA 112 112 1 ENSG00000137807.12 KIF23 chr15 69414246 69448427 + protein_coding KNOWN OTTHUMG00000172062.4 34182 6377 173 ENSG00000259191.2 RP11-253M7.3 chr15 69434466 69435120 - processed_pseudogene KNOWN OTTHUMG00000133359.4 655 655 1 ENSG00000137818.10 RPLP1 chr15 69452784 69456194 + protein_coding KNOWN OTTHUMG00000172087.2 3411 3271 15 ENSG00000207119.2 U3 chr15 69457941 69458149 - snoRNA NOVEL NA 209 209 1 ENSG00000259215.1 RP11-253M7.4 chr15 69458522 69461806 - lincRNA NOVEL OTTHUMG00000172088.1 3285 391 2 ENSG00000245750.6 RP11-279F6.1 chr15 69463026 69571440 + lincRNA NOVEL OTTHUMG00000172098.13 108415 2819 39 ENSG00000259457.1 RP11-279F6.2 chr15 69564724 69565790 - lincRNA NOVEL OTTHUMG00000172094.14 1067 890 2 ENSG00000259641.4 PCAT29 chr15 69592129 69695750 + lincRNA NOVEL OTTHUMG00000172099.1 103622 2830 16 ENSG00000226166.2 RP11-474O21.2 chr1 12692909 12693020 + processed_pseudogene KNOWN OTTHUMG00000001886.2 112 112 1 ENSG00000081237.17 PTPRC chr1 198638671 198757283 + protein_coding KNOWN OTTHUMG00000035702.7 118613 8371 162 ENSG00000238870.1 AC009677.1 chr15 69730740 69730822 - miRNA NOVEL NA 83 83 1 ENSG00000259496.2 RP11-19J5.1 chr15 69803316 69804046 - processed_pseudogene KNOWN OTTHUMG00000172100.2 731 731 1 ENSG00000259309.1 RP11-19J5.2 chr15 69820756 69822856 - lincRNA NOVEL OTTHUMG00000172101.1 2101 547 3 ENSG00000259703.4 LINC00593 chr15 69835234 69843120 + lincRNA NOVEL OTTHUMG00000172102.1 7887 1828 9 ENSG00000140332.14 TLE3 chr15 70047790 70098176 - protein_coding KNOWN OTTHUMG00000172121.3 50387 12634 367 ENSG00000207965.1 MIR629 chr15 70079372 70079468 - miRNA KNOWN NA 97 97 1 ENSG00000200216.2 RNU6-745P chr15 70193236 70193341 + snRNA KNOWN NA 106 106 1 ENSG00000259252.1 AC011648.1 chr15 70195638 70198509 - lincRNA NOVEL OTTHUMG00000172123.1 2872 569 3 ENSG00000259503.1 RP11-543G18.1 chr15 70321576 70326742 + lincRNA NOVEL OTTHUMG00000172124.1 5167 527 2 ENSG00000259473.1 RP11-96C21.1 chr15 70503907 70505928 - lincRNA NOVEL OTTHUMG00000172125.1 2022 239 2 ENSG00000261573.1 RP11-553K8.5 chr1 198657553 198667061 - antisense NOVEL OTTHUMG00000035703.1 9509 416 3 ENSG00000280639.1 RP11-96C21.2 chr15 70570958 70586606 - lincRNA NOVEL OTTHUMG00000189720.1 15649 3206 2 ENSG00000259227.2 RP11-64K10.1 chr15 70602124 70602516 + processed_pseudogene KNOWN OTTHUMG00000172174.2 393 393 1 ENSG00000281264.1 SALRNA3 chr15 70615547 70616567 + lincRNA KNOWN OTTHUMG00000189721.2 1021 1021 1 ENSG00000280515.1 SALRNA2 chr15 70635249 70637314 + lincRNA KNOWN OTTHUMG00000189722.1 2066 2066 1 ENSG00000137831.13 UACA chr15 70654554 70763593 - protein_coding KNOWN OTTHUMG00000133363.3 109040 11031 135 ENSG00000259532.1 RP11-138H8.2 chr15 70748932 70754177 + lincRNA NOVEL OTTHUMG00000172175.1 5246 472 2 ENSG00000274297.1 RP11-138H8.8 chr15 70758269 70758856 - sense_intronic NOVEL OTTHUMG00000186947.1 588 588 1 ENSG00000259624.1 RP11-138H8.3 chr15 70768011 70778868 - antisense NOVEL OTTHUMG00000172176.1 10858 440 2 ENSG00000259452.2 RP11-138H8.4 chr15 70791013 70791486 + processed_pseudogene KNOWN OTTHUMG00000172177.2 474 474 1 ENSG00000235420.7 RPL29P30 chr15 70796597 70802688 - transcribed_processed_pseudogene KNOWN OTTHUMG00000157984.2 6092 946 8 ENSG00000236278.2 PEBP1P3 chr1 198679139 198680033 - processed_pseudogene KNOWN OTTHUMG00000035657.2 895 548 2 ENSG00000166173.10 LARP6 chr15 70829130 70854159 - protein_coding KNOWN OTTHUMG00000172179.3 25030 5554 12 ENSG00000259744.1 RP11-138H8.6 chr15 70848883 70849770 - sense_intronic NOVEL OTTHUMG00000172181.1 888 755 2 ENSG00000137821.10 LRRC49 chr15 70853239 71053657 + protein_coding KNOWN OTTHUMG00000172182.4 200419 9991 243 ENSG00000259470.2 KRT8P9 chr15 70858714 70860162 + processed_pseudogene KNOWN OTTHUMG00000172183.2 1449 1449 1 ENSG00000129028.7 THAP10 chr15 70881342 70892785 - protein_coding KNOWN OTTHUMG00000133388.2 11444 2399 6 ENSG00000242276.2 RPL5P3 chr15 71063101 71063989 - processed_pseudogene KNOWN OTTHUMG00000157991.2 889 889 1 ENSG00000187720.13 THSD4 chr15 71096952 71783383 + protein_coding KNOWN OTTHUMG00000133389.6 686432 15837 55 ENSG00000225362.7 CT62 chr15 71110244 71115494 - protein_coding KNOWN OTTHUMG00000172836.2 5251 2849 13 ENSG00000259964.5 THSD4-AS1 chr15 71147650 71189042 - antisense NOVEL OTTHUMG00000172838.2 41393 3015 15 ENSG00000259781.1 RP11-673C5.1 chr15 71164770 71165415 - processed_pseudogene KNOWN OTTHUMG00000172839.1 646 646 1 ENSG00000229989.3 MIR181A1HG chr1 198807493 198937429 - lincRNA KNOWN OTTHUMG00000035888.2 129937 3250 7 ENSG00000212664.5 RP11-592N21.1 chr15 71341158 71341712 - processed_pseudogene KNOWN OTTHUMG00000157993.1 555 555 1 ENSG00000260586.1 RP11-592N21.2 chr15 71342324 71348471 + sense_intronic NOVEL OTTHUMG00000172840.1 6148 698 3 ENSG00000278408.1 RP11-1123I8.1 chr15 71547280 71549832 - antisense NOVEL OTTHUMG00000186948.1 2553 585 3 ENSG00000274096.1 AC104938.1 chr15 71772610 71772689 + miRNA NOVEL NA 80 80 1 ENSG00000278570.3 NR2E3 chr15 71792638 71818259 + protein_coding KNOWN OTTHUMG00000172841.5 25622 3244 27 ENSG00000260037.4 CTD-2524L6.3 chr15 71818396 71823384 + antisense NOVEL OTTHUMG00000172843.1 4989 896 11 ENSG00000066933.14 MYO9A chr15 71822289 72118577 - protein_coding KNOWN OTTHUMG00000133440.4 296289 20253 273 ENSG00000200873.1 RNA5SP399 chr15 71858570 71858686 + rRNA KNOWN NA 117 117 1 ENSG00000261632.1 RP11-390D11.1 chr15 71972206 72040265 + antisense NOVEL OTTHUMG00000172844.1 68060 781 5 ENSG00000260576.1 EIF5A2P1 chr15 72041194 72041653 - processed_pseudogene KNOWN OTTHUMG00000172845.1 460 460 1 ENSG00000207975.1 MIR181B1 chr1 198858873 198858982 - miRNA KNOWN NA 110 110 1 ENSG00000222094.1 RNU2-65P chr15 72045183 72045367 + snRNA KNOWN NA 185 185 1 ENSG00000223253.1 AC022872.1 chr15 72051251 72051329 + miRNA NOVEL NA 79 79 1 ENSG00000166192.13 SENP8 chr15 72114258 72143688 + protein_coding KNOWN OTTHUMG00000133441.4 29431 5007 13 ENSG00000243568.2 RP11-2I17.1 chr15 72134641 72135436 + processed_pseudogene KNOWN OTTHUMG00000158016.2 796 796 1 ENSG00000260173.1 RP11-2I17.4 chr15 72140504 72155459 - antisense NOVEL OTTHUMG00000172861.1 14956 393 2 ENSG00000175318.10 GRAMD2 chr15 72159807 72197785 - protein_coding KNOWN OTTHUMG00000172708.2 37979 4987 71 ENSG00000067225.16 PKM chr15 72199029 72231822 - protein_coding KNOWN OTTHUMG00000172709.4 32794 8571 159 ENSG00000137817.15 PARP6 chr15 72241181 72272999 - protein_coding KNOWN OTTHUMG00000133443.3 31819 7696 293 ENSG00000273025.1 CELF6 chr15 72266746 72319946 - protein_coding KNOWN OTTHUMG00000133444.3 53201 1902 15 ENSG00000261460.1 RP11-106M3.3 chr15 72278867 72351794 + antisense NOVEL OTTHUMG00000177179.1 72928 3148 3 ENSG00000207759.1 MIR181A1 chr1 198859044 198859153 - miRNA KNOWN NA 110 110 1 ENSG00000260729.1 RP11-106M3.2 chr15 72284727 72375981 - protein_coding NOVEL OTTHUMG00000172710.3 91255 4374 16 ENSG00000140488.13 CELF6 chr15 72284727 72320129 - protein_coding KNOWN OTTHUMG00000186423.1 35403 3588 67 ENSG00000213614.8 HEXA chr15 72340919 72376476 - protein_coding KNOWN OTTHUMG00000133445.5 35558 12611 128 ENSG00000260339.1 HEXA-AS1 chr15 72376113 72378788 + antisense NOVEL OTTHUMG00000177184.1 2676 2676 1 ENSG00000243007.1 RP11-106M3.1 chr15 72379215 72379710 - processed_pseudogene KNOWN OTTHUMG00000158018.1 496 496 1 ENSG00000187806.6 TMEM202 chr15 72398273 72408029 + protein_coding KNOWN OTTHUMG00000172716.2 9757 1012 12 ENSG00000261423.1 RP11-1007O24.3 chr15 72407778 72475168 - lincRNA NOVEL OTTHUMG00000173055.1 67391 2713 5 ENSG00000271072.1 RP11-1007O24.4 chr15 72450657 72451474 + processed_pseudogene KNOWN OTTHUMG00000184900.1 818 818 1 ENSG00000261187.1 RP11-1007O24.2 chr15 72465128 72466262 - lincRNA NOVEL OTTHUMG00000173048.1 1135 1135 1 ENSG00000166233.11 ARIH1 chr15 72474326 72602985 + protein_coding KNOWN OTTHUMG00000133474.4 128660 22880 47 ENSG00000227747.2 RP11-16L9.1 chr1 198949016 198949805 + processed_pseudogene KNOWN OTTHUMG00000035889.1 790 790 1 ENSG00000207690.1 MIR630 chr15 72587217 72587313 + miRNA KNOWN NA 97 97 1 ENSG00000260534.1 RP11-1006G14.4 chr15 72589691 72591845 + sense_overlapping NOVEL OTTHUMG00000176421.1 2155 2155 1 ENSG00000278313.1 RP11-1006G14.5 chr15 72604399 72605008 - unprocessed_pseudogene KNOWN OTTHUMG00000187865.1 610 426 2 ENSG00000260144.1 RP11-361M10.3 chr15 72605183 72612326 + unprocessed_pseudogene KNOWN OTTHUMG00000173095.1 7144 1194 11 ENSG00000259783.4 RP11-1006G14.2 chr15 72608481 72636919 - lincRNA NOVEL OTTHUMG00000173096.2 28439 594 7 ENSG00000260672.1 RP11-1006G14.1 chr15 72615810 72618250 + lincRNA NOVEL OTTHUMG00000173097.1 2441 2441 1 ENSG00000259909.1 RP11-1006G14.3 chr15 72638821 72640125 + unprocessed_pseudogene KNOWN OTTHUMG00000173098.1 1305 382 5 ENSG00000215186.6 GOLGA6B chr15 72654738 72666394 + protein_coding KNOWN OTTHUMG00000133511.4 11657 2234 22 ENSG00000274350.1 Metazoa_SRP chr15 72664577 72664799 + misc_RNA NOVEL NA 223 223 1 ENSG00000175202.3 HIGD2B chr15 72675783 72686149 - protein_coding KNOWN OTTHUMG00000172776.2 10367 1116 3 ENSG00000225172.4 RP11-16L9.2 chr1 198983321 198985400 + lincRNA NOVEL OTTHUMG00000035890.1 2080 1079 6 ENSG00000261281.1 RP11-361M10.4 chr15 72682266 72682904 - transcribed_processed_pseudogene KNOWN OTTHUMG00000173099.1 639 316 2 ENSG00000140463.12 BBS4 chr15 72686179 72738476 + protein_coding KNOWN OTTHUMG00000133510.4 52298 4149 162 ENSG00000159322.16 ADPGK chr15 72751369 72785846 - protein_coding KNOWN OTTHUMG00000172777.2 34478 5931 56 ENSG00000260898.4 ADPGK-AS1 chr15 72782835 72798199 + antisense NOVEL OTTHUMG00000173100.1 15365 3138 6 ENSG00000259259.1 NPM1P42 chr15 72899399 72900260 - processed_pseudogene KNOWN OTTHUMG00000172550.1 862 862 1 ENSG00000067141.15 NEO1 chr15 73051710 73305206 + protein_coding KNOWN OTTHUMG00000133509.6 253497 8117 158 ENSG00000259691.2 FKBP1AP2 chr15 73143236 73143518 - processed_pseudogene KNOWN OTTHUMG00000172551.2 283 283 1 ENSG00000259440.2 NPM1P43 chr15 73161779 73162928 - processed_pseudogene KNOWN OTTHUMG00000172552.2 1150 786 2 ENSG00000259528.1 RP11-272D12.2 chr15 73255334 73256109 - antisense NOVEL OTTHUMG00000172553.1 776 531 2 ENSG00000138622.3 HCN4 chr15 73319859 73369264 - protein_coding KNOWN OTTHUMG00000137563.2 49406 7228 8 ENSG00000233410.1 LINC01222 chr1 199006040 199021037 - lincRNA NOVEL OTTHUMG00000035892.1 14998 1785 3 ENSG00000259650.1 RP11-272D12.1 chr15 73335260 73342387 + antisense NOVEL OTTHUMG00000172548.1 7128 371 7 ENSG00000183324.9 REC114 chr15 73443158 73560014 + protein_coding KNOWN OTTHUMG00000172549.1 116857 927 11 ENSG00000259186.1 MRPS15P1 chr15 73483196 73483943 - processed_pseudogene KNOWN OTTHUMG00000172554.1 748 748 1 ENSG00000156642.15 NPTN chr15 73560014 73634134 - protein_coding KNOWN OTTHUMG00000137586.5 74121 4032 59 ENSG00000281183.1 NPTN-IT1 chr15 73567012 73569294 - sense_intronic KNOWN OTTHUMG00000189514.1 2283 2283 1 ENSG00000103855.16 CD276 chr15 73683966 73714518 + protein_coding KNOWN OTTHUMG00000137585.7 30553 5542 103 ENSG00000276807.1 RP11-8P11.4 chr15 73730048 73731711 - lincRNA NOVEL OTTHUMG00000186950.1 1664 1664 1 ENSG00000205363.5 C15orf59 chr15 73735431 73752747 - protein_coding KNOWN OTTHUMG00000172556.3 17317 6573 10 ENSG00000260469.2 C15orf59-AS1 chr15 73752317 73770613 + lincRNA NOVEL OTTHUMG00000172684.2 18297 1575 5 ENSG00000260624.1 RP11-24D15.1 chr15 73870950 73873366 - antisense NOVEL OTTHUMG00000172726.1 2417 484 5 ENSG00000235492.1 LINC01221 chr1 199016133 199076735 + lincRNA NOVEL OTTHUMG00000035893.1 60603 662 3 ENSG00000167139.7 TBC1D21 chr15 73873608 73889214 + protein_coding KNOWN OTTHUMG00000137594.3 15607 1226 31 ENSG00000222064.1 AC108137.1 chr15 73891409 73891487 + miRNA NOVEL NA 79 79 1 ENSG00000261801.4 LOXL1-AS1 chr15 73908071 73928248 - antisense NOVEL OTTHUMG00000172711.4 20178 4221 44 ENSG00000129038.14 LOXL1 chr15 73925989 73952137 + protein_coding KNOWN OTTHUMG00000137595.4 26149 3637 25 ENSG00000067221.12 STOML1 chr15 73978923 73994622 - protein_coding KNOWN OTTHUMG00000137608.4 15700 10461 65 ENSG00000140464.18 PML chr15 73994673 74047812 + protein_coding KNOWN OTTHUMG00000137607.5 53140 12657 127 ENSG00000260096.1 DNM1P33 chr15 74062780 74063785 + unprocessed_pseudogene KNOWN OTTHUMG00000173034.1 1006 270 2 ENSG00000159289.6 GOLGA6A chr15 74069857 74082550 - protein_coding KNOWN OTTHUMG00000173035.1 12694 3505 27 ENSG00000278604.1 Metazoa_SRP chr15 74072454 74072676 - misc_RNA NOVEL NA 223 223 1 ENSG00000214702.6 RP11-247C2.1 chr15 74097106 74098414 - unprocessed_pseudogene KNOWN OTTHUMG00000173052.1 1309 386 5 ENSG00000237973.1 RP5-857K21.6 chr1 631074 632616 + unprocessed_pseudogene KNOWN OTTHUMG00000002333.2 1543 1543 1 ENSG00000188984.10 AADACL3 chr1 12716115 12728759 + protein_coding KNOWN OTTHUMG00000001887.5 12645 4049 11 ENSG00000231718.1 RP11-382E9.1 chr1 199148598 199393307 + lincRNA NOVEL OTTHUMG00000035891.1 244710 2296 4 ENSG00000167178.14 ISLR2 chr15 74100311 74138540 + protein_coding KNOWN OTTHUMG00000137624.2 38230 6101 40 ENSG00000274013.1 AC010931.1 chr15 74115396 74115469 - miRNA NOVEL NA 74 74 1 ENSG00000248540.2 RP11-247C2.2 chr15 74125915 74129278 - lincRNA NOVEL OTTHUMG00000173053.1 3364 3238 3 ENSG00000261543.1 RP11-665J16.1 chr15 74152800 74179226 - antisense NOVEL OTTHUMG00000173054.1 26427 554 3 ENSG00000278348.1 Metazoa_SRP chr15 74162340 74162620 - misc_RNA NOVEL NA 281 281 1 ENSG00000129009.11 ISLR chr15 74173671 74176872 + protein_coding KNOWN OTTHUMG00000137623.4 3202 2671 8 ENSG00000137868.17 STRA6 chr15 74179466 74212267 - protein_coding KNOWN OTTHUMG00000138998.3 32802 7690 262 ENSG00000259264.4 RP11-60L3.1 chr15 74202705 74221557 + antisense NOVEL OTTHUMG00000172612.2 18853 2292 15 ENSG00000140481.12 CCDC33 chr15 74236289 74336472 + protein_coding KNOWN OTTHUMG00000172621.4 100184 4627 71 ENSG00000280309.1 RP11-60L3.3 chr15 74299503 74304527 + TEC KNOWN OTTHUMG00000177186.1 5025 5025 1 ENSG00000228190.2 RP11-104D3.1 chr1 199371877 199372297 + processed_pseudogene KNOWN OTTHUMG00000035886.2 421 421 1 ENSG00000261384.1 RP11-60L3.2 chr15 74303005 74304343 + sense_intronic NOVEL OTTHUMG00000172634.1 1339 382 2 ENSG00000277749.1 RP11-60L3.6 chr15 74311516 74319688 - antisense NOVEL OTTHUMG00000186951.1 8173 612 2 ENSG00000140459.16 CYP11A1 chr15 74337759 74367740 - protein_coding KNOWN OTTHUMG00000150716.4 29982 3491 50 ENSG00000260266.1 CTD-2311M21.2 chr15 74350768 74364620 + transcribed_processed_pseudogene KNOWN OTTHUMG00000172648.1 13853 3702 7 ENSG00000261821.2 CTD-2311M21.3 chr15 74365435 74371211 + antisense NOVEL OTTHUMG00000172649.2 5777 4946 3 ENSG00000274937.1 CTD-2311M21.4 chr15 74374678 74375511 + lincRNA NOVEL OTTHUMG00000186953.1 834 834 1 ENSG00000277718.1 CTD-2311M21.5 chr15 74379083 74390535 + lincRNA NOVEL OTTHUMG00000186954.1 11453 199 3 ENSG00000138623.8 SEMA7A chr15 74409289 74434467 - protein_coding KNOWN OTTHUMG00000139000.3 25179 4309 50 ENSG00000277391.1 MIR6881 chr15 74411357 74411432 - miRNA KNOWN NA 76 76 1 ENSG00000138629.14 UBL7 chr15 74445977 74461182 - protein_coding KNOWN OTTHUMG00000139001.4 15206 1885 79 ENSG00000236468.1 RP11-104D3.2 chr1 199387141 199388475 + processed_pseudogene KNOWN OTTHUMG00000035887.1 1335 1335 1 ENSG00000247240.6 UBL7-AS1 chr15 74461265 74481302 + antisense NOVEL OTTHUMG00000172644.2 20038 1710 19 ENSG00000260103.2 RP11-10O17.1 chr15 74478070 74490286 - transcribed_processed_pseudogene KNOWN OTTHUMG00000172643.3 12217 3385 4 ENSG00000261775.1 RP11-10O17.3 chr15 74489602 74516959 + lincRNA NOVEL OTTHUMG00000172650.1 27358 361 4 ENSG00000212279.2 SNORD77 chr15 74490959 74491028 - snoRNA NOVEL NA 70 70 1 ENSG00000179361.16 ARID3B chr15 74541177 74598131 + protein_coding KNOWN OTTHUMG00000141321.2 56955 6212 29 ENSG00000179335.17 CLK3 chr15 74598500 74645414 + protein_coding KNOWN OTTHUMG00000141320.12 46915 20443 163 ENSG00000275527.1 CTD-3154N5.2 chr15 74598919 74599397 - lincRNA NOVEL OTTHUMG00000186955.1 479 479 1 ENSG00000260919.1 CTD-3154N5.1 chr15 74613194 74615596 - antisense NOVEL OTTHUMG00000172816.2 2403 498 2 ENSG00000179151.10 EDC3 chr15 74630558 74696292 - protein_coding KNOWN OTTHUMG00000142815.7 65735 5103 77 ENSG00000140465.12 CYP1A1 chr15 74719542 74725610 - protein_coding KNOWN OTTHUMG00000142812.3 6069 3435 69 ENSG00000263805.1 AL450244.1 chr1 199615188 199615280 - miRNA NOVEL NA 93 93 1 ENSG00000140505.6 CYP1A2 chr15 74748844 74756202 + protein_coding KNOWN OTTHUMG00000172901.3 7359 2728 7 ENSG00000103653.15 CSK chr15 74782057 74803198 + protein_coding KNOWN OTTHUMG00000142814.4 21142 4570 94 ENSG00000264386.1 MIR4513 chr15 74788672 74788757 - miRNA KNOWN NA 86 86 1 ENSG00000140506.15 LMAN1L chr15 74812716 74825758 + protein_coding KNOWN OTTHUMG00000142813.8 13043 4108 64 ENSG00000261606.4 RP11-414J4.2 chr15 74816223 74831795 + processed_transcript NOVEL OTTHUMG00000172966.2 15573 6793 20 ENSG00000213578.5 CPLX3 chr15 74826547 74831802 + protein_coding KNOWN OTTHUMG00000142816.3 5256 2082 3 ENSG00000140474.11 ULK3 chr15 74836116 74843346 - protein_coding KNOWN OTTHUMG00000173020.11 7231 3516 213 ENSG00000275411.1 MIR6882 chr15 74840642 74840707 - miRNA KNOWN NA 66 66 1 ENSG00000140497.15 SCAMP2 chr15 74843730 74873365 - protein_coding KNOWN OTTHUMG00000142817.4 29636 5000 74 ENSG00000178802.16 MPI chr15 74890005 74902219 + protein_coding KNOWN OTTHUMG00000142826.8 12215 9090 121 ENSG00000231984.1 RP11-2L13.1 chr1 199752491 199752890 + processed_pseudogene KNOWN OTTHUMG00000035917.1 400 400 1 ENSG00000178761.13 FAM219B chr15 74899987 74907121 - protein_coding KNOWN OTTHUMG00000172715.5 7135 5258 89 ENSG00000178741.10 COX5A chr15 74919791 74938168 - protein_coding KNOWN OTTHUMG00000142825.3 18378 1411 25 ENSG00000178718.6 RPP25 chr15 74954416 74957464 - protein_coding KNOWN OTTHUMG00000142822.2 3049 3049 1 ENSG00000198794.10 SCAMP5 chr15 74957219 75021496 + protein_coding KNOWN OTTHUMG00000172704.9 64278 4873 97 ENSG00000261813.2 RP11-151H2.3 chr15 74976240 74976573 - processed_pseudogene KNOWN OTTHUMG00000172712.2 334 334 1 ENSG00000199580.1 Y_RNA chr15 74983274 74983376 - misc_RNA NOVEL NA 103 103 1 ENSG00000273798.1 AC015720.1 chr15 75012418 75012484 + miRNA NOVEL NA 67 67 1 ENSG00000260483.2 RP11-151H2.1 chr15 75022980 75023256 + processed_pseudogene KNOWN OTTHUMG00000172697.2 277 277 1 ENSG00000138621.10 PPCDC chr15 75023555 75117462 + protein_coding KNOWN OTTHUMG00000142824.4 93908 3781 41 ENSG00000260152.2 RP11-69H7.4 chr15 75114261 75114868 + processed_pseudogene KNOWN OTTHUMG00000172818.2 608 608 1 ENSG00000228530.1 RP11-567B20.1 chr1 199876978 199877558 + processed_pseudogene KNOWN OTTHUMG00000035915.1 581 251 2 ENSG00000203411.3 Metazoa_SRP chr15 75120265 75120562 - misc_RNA NOVEL NA 298 298 1 ENSG00000252722.1 SCARNA20 chr15 75121536 75121666 - scaRNA NOVEL NA 131 131 1 ENSG00000240366.1 RPL36AP45 chr15 75186651 75186968 - processed_pseudogene KNOWN OTTHUMG00000158029.1 318 318 1 ENSG00000167173.17 C15orf39 chr15 75195643 75212169 + protein_coding KNOWN OTTHUMG00000142820.2 16527 5812 18 ENSG00000261779.1 RP11-69H7.3 chr15 75211301 75212167 - antisense NOVEL OTTHUMG00000172790.1 867 206 2 ENSG00000264950.1 AC113208.1 chr15 75225871 75225971 + miRNA NOVEL NA 101 101 1 ENSG00000260660.1 RP11-69H7.2 chr15 75226753 75233951 - lincRNA NOVEL OTTHUMG00000172668.1 7199 1306 8 ENSG00000260104.1 RP11-817O13.1 chr15 75249232 75249407 - unprocessed_pseudogene KNOWN OTTHUMG00000172669.1 176 176 1 ENSG00000261205.2 NIFKP4 chr15 75251743 75252934 - processed_pseudogene KNOWN OTTHUMG00000172670.2 1192 1192 1 ENSG00000140478.13 GOLGA6D chr15 75258558 75295530 + protein_coding KNOWN OTTHUMG00000172672.1 36973 3870 36 ENSG00000200139.1 RNU6-778P chr1 199888159 199888261 + snRNA KNOWN NA 103 103 1 ENSG00000167195.7 GOLGA6C chr15 75258599 75270199 + protein_coding KNOWN OTTHUMG00000172671.1 11601 2082 18 ENSG00000277295.1 Metazoa_SRP chr15 75268430 75268652 + misc_RNA NOVEL NA 223 223 1 ENSG00000275992.1 Metazoa_SRP chr15 75292706 75292928 + misc_RNA NOVEL NA 223 223 1 ENSG00000260357.1 DNM1P34 chr15 75299953 75302965 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000172673.1 3013 2305 4 ENSG00000259790.1 ANP32BP1 chr15 75321397 75322693 - transcribed_processed_pseudogene KNOWN OTTHUMG00000172674.1 1297 1297 2 ENSG00000140365.14 COMMD4 chr15 75335891 75343224 + protein_coding KNOWN OTTHUMG00000142823.4 7334 6779 119 ENSG00000275645.1 RP11-817O13.9 chr15 75346744 75347161 - antisense NOVEL OTTHUMG00000186960.1 418 418 1 ENSG00000140398.12 NEIL1 chr15 75346955 75357114 + protein_coding KNOWN OTTHUMG00000142821.3 10160 6938 103 ENSG00000207636.1 MIR631 chr15 75353611 75353685 - miRNA KNOWN NA 75 75 1 ENSG00000280564.1 MAN2C1 chr15 75355210 75355746 - processed_transcript KNOWN OTTHUMG00000172698.4 537 343 2 ENSG00000229747.1 RP11-567B20.2 chr1 199908921 199909648 + processed_pseudogene KNOWN OTTHUMG00000035916.1 728 728 1 ENSG00000140400.13 MAN2C1 chr15 75355792 75368630 - protein_coding KNOWN OTTHUMG00000172698.4 12839 8557 307 ENSG00000260274.1 RP11-817O13.8 chr15 75368155 75369584 + lincRNA NOVEL OTTHUMG00000173067.1 1430 1430 1 ENSG00000169375.14 SIN3A chr15 75369379 75455842 - protein_coding KNOWN OTTHUMG00000142834.2 86464 12453 104 ENSG00000241890.1 RPL13P4 chr15 75388267 75388828 + processed_pseudogene KNOWN OTTHUMG00000158030.1 562 562 1 ENSG00000261714.2 CTD-2562G15.2 chr15 75415249 75416020 + processed_pseudogene KNOWN OTTHUMG00000172733.2 772 466 2 ENSG00000276744.1 CTD-2562G15.3 chr15 75452964 75453947 - sense_intronic NOVEL OTTHUMG00000186962.1 984 984 1 ENSG00000169410.8 PTPN9 chr15 75463251 75579289 - protein_coding KNOWN OTTHUMG00000142838.3 116039 8632 40 ENSG00000260165.1 CTD-2323K18.3 chr15 75480661 75480836 + unprocessed_pseudogene KNOWN OTTHUMG00000172734.1 176 176 1 ENSG00000259931.2 CTD-2323K18.2 chr15 75512770 75513040 - processed_pseudogene KNOWN OTTHUMG00000172735.2 271 271 1 ENSG00000260269.4 CTD-2323K18.1 chr15 75527150 75601205 - processed_transcript NOVEL OTTHUMG00000172736.1 74056 1095 15 ENSG00000202491.1 RNU6-716P chr1 200008505 200008607 - snRNA KNOWN NA 103 103 1 ENSG00000281061.1 Metazoa_SRP chr15 75540933 75541205 + misc_RNA NOVEL NA 273 273 1 ENSG00000169371.12 SNUPN chr15 75598083 75626469 - protein_coding KNOWN OTTHUMG00000142833.3 28387 3516 68 ENSG00000260235.1 CTD-2026K11.3 chr15 75624793 75625690 + antisense NOVEL OTTHUMG00000172791.1 898 560 2 ENSG00000260206.1 CTD-2026K11.2 chr15 75636139 75639239 + antisense NOVEL OTTHUMG00000172792.1 3101 572 3 ENSG00000177971.8 IMP3 chr15 75639085 75648706 - protein_coding KNOWN OTTHUMG00000142840.3 9622 2565 6 ENSG00000275454.1 CTD-2026K11.4 chr15 75639760 75640976 + antisense NOVEL OTTHUMG00000186970.1 1217 1217 1 ENSG00000274515.1 CTD-2026K11.5 chr15 75645020 75645442 + antisense NOVEL OTTHUMG00000186971.1 423 423 1 ENSG00000173548.8 SNX33 chr15 75647906 75662301 + protein_coding KNOWN OTTHUMG00000142835.2 14396 8008 5 ENSG00000173546.7 CSPG4 chr15 75674322 75712848 - protein_coding KNOWN OTTHUMG00000142836.1 38527 8290 10 ENSG00000260892.1 CTD-2026K11.1 chr15 75676227 75677162 + antisense NOVEL OTTHUMG00000172779.1 936 563 2 ENSG00000202329.1 RNU6-609P chr1 200014689 200014795 - snRNA KNOWN NA 107 107 1 ENSG00000203392.3 CTD-2026K11.6 chr15 75678548 75680752 + antisense NOVEL OTTHUMG00000186972.1 2205 2205 1 ENSG00000182950.2 ODF3L1 chr15 75723977 75727688 + protein_coding KNOWN OTTHUMG00000142837.1 3712 1196 4 ENSG00000246877.1 DNM1P35 chr15 75727670 75738623 - antisense NOVEL OTTHUMG00000177189.1 10954 3188 3 ENSG00000260288.3 RP11-24M17.4 chr15 75737820 75763321 + processed_transcript NOVEL OTTHUMG00000172793.2 25502 2489 8 ENSG00000260815.3 RP11-24M17.3 chr15 75746769 75747263 + processed_pseudogene KNOWN OTTHUMG00000172794.3 495 495 1 ENSG00000261043.3 RP11-24M17.6 chr15 75759501 75762405 - lincRNA NOVEL OTTHUMG00000172896.1 2905 2905 1 ENSG00000274496.1 MIR4313 chr15 75762215 75762315 - miRNA KNOWN NA 101 101 1 ENSG00000187812.11 RP11-24M17.5 chr15 75775553 75786898 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000172795.1 11346 2112 28 ENSG00000241807.3 RN7SL319P chr15 75785134 75785354 + misc_RNA KNOWN NA 221 221 1 ENSG00000261820.1 DNM1P49 chr15 75791470 75792683 - unprocessed_pseudogene KNOWN OTTHUMG00000172796.1 1214 474 2 ENSG00000157330.8 C1orf158 chr1 12746215 12763699 + protein_coding KNOWN OTTHUMG00000001888.4 17485 4118 9 ENSG00000116833.12 NR5A2 chr1 200027602 200177424 + protein_coding KNOWN OTTHUMG00000035635.4 149823 7559 32 ENSG00000140367.10 UBE2Q2 chr15 75843285 75901078 + protein_coding KNOWN OTTHUMG00000142839.2 57794 3852 65 ENSG00000266308.2 RN7SL510P chr15 75895040 75895302 + misc_RNA KNOWN NA 263 263 1 ENSG00000167196.12 FBXO22 chr15 75903859 75942510 + protein_coding KNOWN OTTHUMG00000142841.4 38652 11837 47 ENSG00000169752.15 NRG4 chr15 75935969 76059795 - protein_coding KNOWN OTTHUMG00000142917.3 123827 5031 101 ENSG00000260685.1 RP11-326L17.1 chr15 75950464 75951144 - processed_pseudogene KNOWN OTTHUMG00000172846.1 681 681 1 ENSG00000169758.11 C15orf27 chr15 76059837 76229121 + protein_coding KNOWN OTTHUMG00000142918.6 169285 5265 40 ENSG00000259422.1 RP11-593F23.1 chr15 76174891 76181486 - antisense NOVEL OTTHUMG00000172584.1 6596 2354 3 ENSG00000140374.14 ETFA chr15 76215355 76311472 - protein_coding KNOWN OTTHUMG00000172586.5 96118 5031 155 ENSG00000196274.5 Metazoa_SRP chr15 76230048 76230390 - misc_RNA NOVEL NA 343 343 1 ENSG00000259581.3 TYRO3P chr15 76258986 76261690 - processed_pseudogene KNOWN OTTHUMG00000172619.3 2705 2705 1 ENSG00000252860.1 RNU6-570P chr1 200054061 200054165 + snRNA KNOWN NA 105 105 1 ENSG00000159556.8 ISL2 chr15 76336724 76342476 + protein_coding KNOWN OTTHUMG00000143723.3 5753 2221 13 ENSG00000259514.1 RP11-685G9.2 chr15 76339609 76342063 - antisense NOVEL OTTHUMG00000172620.1 2455 758 3 ENSG00000270036.1 RP11-685G9.4 chr15 76343642 76344365 + lincRNA NOVEL OTTHUMG00000184124.1 724 724 1 ENSG00000140386.11 SCAPER chr15 76347904 76905444 - protein_coding KNOWN OTTHUMG00000172655.3 557541 11610 252 ENSG00000261232.2 RP11-331H13.1 chr15 76472099 76472365 + processed_pseudogene KNOWN OTTHUMG00000172666.2 267 267 1 ENSG00000266449.1 MIR3713 chr15 76586647 76586691 + miRNA KNOWN NA 45 45 1 ENSG00000201510.1 RN7SKP217 chr15 76736641 76736980 + misc_RNA KNOWN NA 340 340 1 ENSG00000117906.12 RCN2 chr15 76931619 76954392 + protein_coding KNOWN OTTHUMG00000143730.3 22774 10019 31 ENSG00000243365.3 RN7SL278P chr15 76976915 76977210 - misc_RNA KNOWN NA 296 296 1 ENSG00000259565.2 KRT8P23 chr15 76979245 76980451 - processed_pseudogene KNOWN OTTHUMG00000172602.2 1207 1207 1 ENSG00000221403.1 AC096633.1 chr1 200144834 200144935 + miRNA NOVEL NA 102 102 1 ENSG00000140368.11 PSTPIP1 chr15 76993359 77037332 + protein_coding KNOWN OTTHUMG00000172594.4 43974 4468 169 ENSG00000140391.13 TSPAN3 chr15 77041404 77083984 - protein_coding KNOWN OTTHUMG00000143728.9 42581 8506 50 ENSG00000259652.1 RP11-797A18.3 chr15 77043680 77045160 + lincRNA NOVEL OTTHUMG00000172617.1 1481 264 2 ENSG00000280730.1 AC090181.1 chr15 77056895 77057021 + miRNA NOVEL NA 127 127 1 ENSG00000278991.1 RP11-797A18.5 chr15 77063397 77064910 - TEC KNOWN OTTHUMG00000177201.1 1514 1514 1 ENSG00000269951.1 RP11-797A18.6 chr15 77067654 77068325 - sense_intronic NOVEL OTTHUMG00000183983.1 672 672 1 ENSG00000173517.9 PEAK1 chr15 77100656 77420144 - protein_coding KNOWN OTTHUMG00000172618.9 319489 24184 51 ENSG00000259722.2 RP11-94P14.1 chr15 77204578 77205100 + processed_pseudogene KNOWN OTTHUMG00000172622.2 523 245 2 ENSG00000230459.3 RP11-741G21.1 chr15 77278465 77278774 + processed_pseudogene KNOWN OTTHUMG00000172624.2 310 310 1 ENSG00000140382.13 HMG20A chr15 77420412 77485607 + protein_coding KNOWN OTTHUMG00000143729.5 65196 6403 57 ENSG00000229220.1 RP11-47A17.2 chr1 200147531 200148279 - processed_pseudogene KNOWN OTTHUMG00000057659.1 749 749 1 ENSG00000279033.1 RP11-500C12.1 chr15 77484275 77485606 - TEC KNOWN OTTHUMG00000173008.1 1332 1332 1 ENSG00000259362.2 RP11-307C19.1 chr15 77525540 77534110 + lincRNA NOVEL OTTHUMG00000172610.2 8571 3814 2 ENSG00000259420.4 RP11-307C19.2 chr15 77568970 77608888 + lincRNA NOVEL OTTHUMG00000172611.3 39919 1224 7 ENSG00000169783.11 LINGO1 chr15 77613027 77820900 - protein_coding KNOWN OTTHUMG00000172629.6 207874 4902 60 ENSG00000259666.2 LINGO1-AS1 chr15 77641764 77652288 + antisense NOVEL OTTHUMG00000172626.2 10525 2720 8 ENSG00000259281.1 LINGO1-AS2 chr15 77660052 77668074 + antisense NOVEL OTTHUMG00000172627.1 8023 663 3 ENSG00000280359.1 CTD-2071N1.2 chr15 77784610 77785070 - TEC KNOWN OTTHUMG00000172977.1 461 461 1 ENSG00000259213.1 CTD-2071N1.1 chr15 77787193 77788674 + antisense NOVEL OTTHUMG00000172628.1 1482 841 4 ENSG00000260139.5 CSPG4P13 chr15 77894684 77904674 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000172978.1 9991 4818 11 ENSG00000260776.4 RP11-114H24.2 chr15 77914217 77926846 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000172979.1 12630 3175 37 ENSG00000281125.1 AL590126.1 chr1 200197913 200198016 + miRNA NOVEL NA 104 104 1 ENSG00000261244.1 RP11-114H24.7 chr15 77916522 77922019 + lincRNA NOVEL OTTHUMG00000172980.1 5498 353 2 ENSG00000242066.3 RN7SL214P chr15 77916718 77916982 - misc_RNA KNOWN NA 265 265 1 ENSG00000214646.7 RP11-114H24.4 chr15 77941442 77944582 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000172981.1 3141 876 8 ENSG00000261403.1 RP11-114H24.3 chr15 77954075 77963654 - lincRNA NOVEL OTTHUMG00000172982.1 9580 571 2 ENSG00000261143.1 ADAMTS7P3 chr15 77976042 77993057 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000172983.1 17016 3758 17 ENSG00000167202.10 TBC1D2B chr15 77984036 78077724 - protein_coding KNOWN OTTHUMG00000152885.3 93689 9763 52 ENSG00000259792.1 RP11-114H24.6 chr15 77993405 77995289 + antisense NOVEL OTTHUMG00000172984.1 1885 483 3 ENSG00000221476.1 MIR1827 chr15 78038531 78038595 + miRNA KNOWN NA 65 65 1 ENSG00000183476.11 SH2D7 chr15 78077808 78104909 + protein_coding KNOWN OTTHUMG00000154271.2 27102 2881 12 ENSG00000199633.1 SNORA63 chr15 78091172 78091297 - snoRNA NOVEL NA 126 126 1 ENSG00000233827.2 FAM58BP chr1 200213678 200214322 + processed_pseudogene KNOWN OTTHUMG00000035720.1 645 645 1 ENSG00000136425.11 CIB2 chr15 78104606 78131544 - protein_coding KNOWN OTTHUMG00000143731.3 26939 2146 43 ENSG00000166411.12 IDH3A chr15 78131498 78171949 + protein_coding KNOWN OTTHUMG00000143732.10 40452 6832 148 ENSG00000260988.1 RP11-285A1.1 chr15 78141243 78143173 + lincRNA NOVEL OTTHUMG00000173065.1 1931 1931 1 ENSG00000103740.8 ACSBG1 chr15 78167468 78245688 - protein_coding KNOWN OTTHUMG00000143734.4 78221 8230 86 ENSG00000259708.1 RP11-762H8.3 chr15 78250502 78264156 - antisense NOVEL OTTHUMG00000172583.1 13655 685 5 ENSG00000140403.11 DNAJA4 chr15 78264086 78282196 + protein_coding KNOWN OTTHUMG00000143733.8 18111 6591 67 ENSG00000140395.7 WDR61 chr15 78277835 78299794 - protein_coding KNOWN OTTHUMG00000143735.6 21960 7279 95 ENSG00000272418.1 RP11-762H8.4 chr15 78280950 78282190 - sense_intronic NOVEL OTTHUMG00000185819.1 1241 369 2 ENSG00000259562.2 RP11-762H8.2 chr15 78290527 78291221 - transcribed_processed_pseudogene KNOWN OTTHUMG00000172572.2 695 695 1 ENSG00000259322.1 RP11-762H8.1 chr15 78293286 78296049 + antisense NOVEL OTTHUMG00000172565.1 2764 449 2 ENSG00000273093.1 RP11-532L16.3 chr1 200315435 200315967 - lincRNA NOVEL OTTHUMG00000186492.1 533 533 1 ENSG00000277482.1 RP11-762H8.5 chr15 78299701 78299924 + antisense NOVEL OTTHUMG00000186975.1 224 224 1 ENSG00000281816.1 AC090607.1 chr15 78328352 78328461 + miRNA NOVEL NA 110 110 1 ENSG00000279694.1 RP11-5O23.2 chr15 78339208 78341757 - TEC KNOWN OTTHUMG00000177202.1 2550 2550 1 ENSG00000166426.7 CRABP1 chr15 78340324 78348230 + protein_coding KNOWN OTTHUMG00000143862.4 7907 993 9 ENSG00000259413.2 RP11-5O23.1 chr15 78382573 78383155 + processed_pseudogene KNOWN OTTHUMG00000172566.2 583 583 1 ENSG00000136381.11 IREB2 chr15 78437431 78501456 + protein_coding KNOWN OTTHUMG00000143861.6 64026 10806 80 ENSG00000259474.1 RP11-650L12.1 chr15 78480057 78481820 - antisense NOVEL OTTHUMG00000172564.1 1764 325 2 ENSG00000188266.12 HYKK chr15 78507564 78537372 + protein_coding KNOWN OTTHUMG00000177204.2 29809 5707 27 ENSG00000279373.1 RP11-650L12.4 chr15 78537681 78538946 + TEC KNOWN OTTHUMG00000187318.1 1266 1266 1 ENSG00000041357.14 PSMA4 chr15 78540405 78552419 + protein_coding KNOWN OTTHUMG00000143859.9 12015 6996 130 ENSG00000213045.3 RP11-532L16.1 chr1 200329161 200329677 + processed_pseudogene KNOWN OTTHUMG00000035721.1 517 517 1 ENSG00000169684.12 CHRNA5 chr15 78565520 78595269 + protein_coding KNOWN OTTHUMG00000143858.3 29750 3623 19 ENSG00000261762.1 RP11-650L12.2 chr15 78589123 78591276 - antisense NOVEL OTTHUMG00000177203.1 2154 2154 1 ENSG00000080644.14 CHRNA3 chr15 78593052 78621295 - protein_coding KNOWN OTTHUMG00000143863.4 28244 4765 31 ENSG00000279421.1 RP11-335K5.3 chr15 78599892 78600013 - TEC KNOWN OTTHUMG00000179503.1 122 122 1 ENSG00000117971.10 CHRNB4 chr15 78624119 78727754 - protein_coding KNOWN OTTHUMG00000143860.4 103636 4976 35 ENSG00000259555.1 RP11-335K5.2 chr15 78625895 78628193 + antisense NOVEL OTTHUMG00000172513.1 2299 1980 2 ENSG00000261303.4 RP11-160C18.2 chr15 78660644 78735495 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000172905.1 74852 2475 33 ENSG00000213307.4 RPL18P11 chr15 78661047 78661576 - processed_pseudogene KNOWN OTTHUMG00000158032.1 530 530 1 ENSG00000273512.1 RP11-160C18.5 chr15 78749833 78750107 - unprocessed_pseudogene KNOWN OTTHUMG00000187867.1 275 275 1 ENSG00000238166.2 RP11-160C18.4 chr15 78752107 78753373 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000172906.1 1267 392 3 ENSG00000203721.4 LINC00862 chr1 200342544 200374354 - lincRNA NOVEL OTTHUMG00000035722.2 31811 1757 9 ENSG00000136378.13 ADAMTS7 chr15 78759203 78811431 - protein_coding KNOWN OTTHUMG00000172907.1 52229 7730 63 ENSG00000185787.13 MORF4L1 chr15 78810487 78898133 + protein_coding KNOWN OTTHUMG00000143865.7 87647 6584 185 ENSG00000243711.1 RPL21P116 chr15 78863247 78863729 - processed_pseudogene KNOWN OTTHUMG00000158036.1 483 483 1 ENSG00000252061.1 RNU6-415P chr15 78898840 78898936 - snRNA KNOWN NA 97 97 1 ENSG00000279235.1 RP11-16K12.2 chr15 78906127 78906809 + TEC KNOWN OTTHUMG00000173036.1 683 683 1 ENSG00000103811.14 CTSH chr15 78921058 78949574 - protein_coding KNOWN OTTHUMG00000144171.3 28517 5892 125 ENSG00000058335.14 RASGRF1 chr15 78959947 79090773 - protein_coding KNOWN OTTHUMG00000144172.3 130827 9929 108 ENSG00000177699.4 RP11-16K12.1 chr15 78978889 78985926 + antisense NOVEL OTTHUMG00000172504.1 7038 1900 2 ENSG00000239022.1 AC069082.1 chr15 79114293 79114359 + miRNA NOVEL NA 67 67 1 ENSG00000259234.4 ANKRD34C-AS1 chr15 79191707 79283945 - lincRNA NOVEL OTTHUMG00000172071.2 92239 1543 25 ENSG00000162702.7 ZNF281 chr1 200404940 200410056 - protein_coding KNOWN OTTHUMG00000035724.2 5117 4895 7 ENSG00000207695.1 MIR184 chr15 79209788 79209871 + miRNA KNOWN NA 84 84 1 ENSG00000259419.2 HNRNPCP3 chr15 79236332 79237206 + processed_pseudogene KNOWN OTTHUMG00000172070.2 875 875 1 ENSG00000235711.4 ANKRD34C chr15 79293285 79298235 + protein_coding KNOWN OTTHUMG00000172072.3 4951 4951 1 ENSG00000166557.11 TMED3 chr15 79311062 79427432 + protein_coding KNOWN OTTHUMG00000144170.4 116371 19470 15 ENSG00000266543.1 AC027811.1 chr15 79338730 79338814 + miRNA NOVEL NA 85 85 1 ENSG00000169330.7 KIAA1024 chr15 79432516 79472290 + protein_coding KNOWN OTTHUMG00000172073.1 39775 6800 8 ENSG00000259493.2 RP11-621H8.2 chr15 79559256 79560304 - processed_pseudogene KNOWN OTTHUMG00000172476.2 1049 1049 1 ENSG00000259208.2 RP11-621H8.1 chr15 79668342 79668816 - processed_pseudogene KNOWN OTTHUMG00000172074.2 475 475 1 ENSG00000260674.2 RP11-591L14.2 chr15 79743311 79743468 + processed_pseudogene KNOWN OTTHUMG00000176723.2 158 158 1 ENSG00000213527.5 RP11-591L14.1 chr15 79751689 79752049 - processed_pseudogene KNOWN OTTHUMG00000158038.2 361 361 1 ENSG00000116726.4 PRAMEF12 chr1 12774841 12777906 + protein_coding KNOWN OTTHUMG00000001927.2 3066 1786 3 ENSG00000230623.2 RP11-469A15.2 chr1 200473920 200478293 + lincRNA NOVEL OTTHUMG00000035719.1 4374 507 2 ENSG00000259229.2 RP11-38G5.3 chr15 79758549 79758762 - processed_pseudogene KNOWN OTTHUMG00000172075.2 214 214 1 ENSG00000252995.1 RNU6-667P chr15 79817349 79817450 - snRNA KNOWN NA 102 102 1 ENSG00000259548.1 RP11-38G5.2 chr15 79832466 79833554 - lincRNA NOVEL OTTHUMG00000172076.1 1089 539 2 ENSG00000136371.8 MTHFS chr15 79833585 79897379 - protein_coding KNOWN OTTHUMG00000144174.3 63795 1633 11 ENSG00000261229.4 MTHFS chr15 79843547 79897285 - lincRNA NOVEL OTTHUMG00000176724.1 53739 2328 8 ENSG00000259332.2 ST20-MTHFS chr15 79845195 79923754 - protein_coding KNOWN OTTHUMG00000172077.3 78560 869 7 ENSG00000279394.1 RP11-81A1.4 chr15 79875920 79878179 - TEC KNOWN OTTHUMG00000176725.1 2260 2260 1 ENSG00000180953.10 ST20 chr15 79898840 79923702 - protein_coding KNOWN OTTHUMG00000172078.2 24863 1614 8 ENSG00000278600.1 RP11-81A1.6 chr15 79920195 79922455 - sense_intronic NOVEL OTTHUMG00000176726.2 2261 2261 1 ENSG00000259642.2 ST20-AS1 chr15 79922771 79926993 + antisense NOVEL OTTHUMG00000172079.2 4223 4223 2 ENSG00000118193.10 KIF14 chr1 200551497 200620734 - protein_coding KNOWN OTTHUMG00000035723.1 69238 7277 59 ENSG00000259770.2 RP11-81A1.3 chr15 79944498 79945578 + processed_pseudogene KNOWN OTTHUMG00000172477.2 1081 1081 1 ENSG00000140379.7 BCL2A1 chr15 79960889 79971446 - protein_coding KNOWN OTTHUMG00000144173.1 10558 1089 5 ENSG00000271364.1 RP11-81A1.8 chr15 79984151 79985724 + processed_pseudogene KNOWN OTTHUMG00000184917.1 1574 948 3 ENSG00000279719.1 RP11-81A1.7 chr15 79989905 79990606 + TEC KNOWN OTTHUMG00000176727.1 702 702 3 ENSG00000279705.1 RP11-758M2.1 chr15 80014157 80015707 + TEC KNOWN OTTHUMG00000176728.1 1551 1551 1 ENSG00000275460.1 Metazoa_SRP chr15 80057425 80057684 - misc_RNA NOVEL NA 260 260 1 ENSG00000086666.17 ZFAND6 chr15 80059568 80138393 + protein_coding KNOWN OTTHUMG00000144169.4 78826 5153 127 ENSG00000103876.10 FAH chr15 80152490 80186946 + protein_coding KNOWN OTTHUMG00000144187.3 34457 7063 101 ENSG00000259967.1 RP11-2E17.2 chr15 80165923 80166980 + lincRNA NOVEL OTTHUMG00000176729.1 1058 556 2 ENSG00000259417.2 LINC01314 chr15 80195484 80252213 - lincRNA NOVEL OTTHUMG00000172080.4 56730 6890 3 ENSG00000118197.12 DDX59 chr1 200623896 200669969 - protein_coding KNOWN OTTHUMG00000035725.6 46074 4470 38 ENSG00000259361.4 LINC00927 chr15 80263068 80341805 - lincRNA NOVEL OTTHUMG00000172168.2 78738 3664 11 ENSG00000259495.2 RP11-210M15.2 chr15 80344853 80403575 - lincRNA NOVEL OTTHUMG00000172167.3 58723 7251 6 ENSG00000172379.17 ARNT2 chr15 80404350 80597937 + protein_coding KNOWN OTTHUMG00000165478.7 193588 7741 123 ENSG00000258010.3 RP11-210M15.1 chr15 80433795 80445152 - antisense NOVEL OTTHUMG00000169345.1 11358 1891 3 ENSG00000259175.1 RP11-379K22.2 chr15 80554609 80562944 - antisense NOVEL OTTHUMG00000172165.1 8336 2520 3 ENSG00000270919.1 RP11-379K22.3 chr15 80580029 80580566 - antisense NOVEL OTTHUMG00000185125.1 538 538 1 ENSG00000266542.1 MIR5572 chr15 80581103 80581239 + miRNA KNOWN NA 137 137 1 ENSG00000222139.1 RNU6-380P chr15 80663772 80663878 + snRNA KNOWN NA 107 107 1 ENSG00000136379.10 ABHD17C chr15 80679684 80755621 + protein_coding KNOWN OTTHUMG00000172282.1 75938 3627 16 ENSG00000271983.1 RP11-28H5.2 chr15 80693216 80693707 - lincRNA NOVEL OTTHUMG00000185310.1 492 492 1 ENSG00000260088.1 RP11-92G12.3 chr1 200669507 200694250 + lincRNA NOVEL OTTHUMG00000035741.1 24744 736 3 ENSG00000103888.14 CEMIP chr15 80779343 80951776 + protein_coding KNOWN OTTHUMG00000144184.4 172434 7621 121 ENSG00000208003.1 MIR549A chr15 80841978 80842073 - miRNA KNOWN NA 96 96 1 ENSG00000259546.1 RP11-351M8.2 chr15 80896190 80948867 - antisense NOVEL OTTHUMG00000172307.1 52678 683 4 ENSG00000259649.3 RP11-351M8.1 chr15 80896191 80909777 - antisense NOVEL OTTHUMG00000172298.1 13587 744 11 ENSG00000117899.9 MESDC2 chr15 80946289 80989878 - protein_coding KNOWN OTTHUMG00000172288.3 43590 7510 26 ENSG00000260619.1 RP11-775C24.3 chr15 80990804 80993258 - lincRNA NOVEL OTTHUMG00000173021.1 2455 2455 1 ENSG00000265855.1 MIR4514 chr15 80997417 80997473 - miRNA KNOWN NA 57 57 1 ENSG00000277782.1 RP11-775C24.5 chr15 80999593 80999981 - lincRNA NOVEL OTTHUMG00000186976.1 389 389 1 ENSG00000140406.3 MESDC1 chr15 81000944 81005788 + protein_coding KNOWN OTTHUMG00000144185.1 4845 4845 1 ENSG00000156206.12 C15orf26 chr15 81007033 81149175 + protein_coding KNOWN OTTHUMG00000172263.1 142143 1979 16 ENSG00000118200.13 CAMSAP2 chr1 200739558 200860704 + protein_coding KNOWN OTTHUMG00000035740.4 121147 7777 62 ENSG00000279834.1 RP11-775C24.4 chr15 81060953 81063488 + TEC KNOWN OTTHUMG00000173045.1 2536 2536 1 ENSG00000259461.1 ANP32BP3 chr15 81117635 81118340 - processed_pseudogene KNOWN OTTHUMG00000172264.1 706 706 1 ENSG00000172349.15 IL16 chr15 81159575 81314058 + protein_coding KNOWN OTTHUMG00000144186.8 154484 12094 129 ENSG00000271725.1 RP11-761I4.4 chr15 81303215 81309391 - 3prime_overlapping_ncrna NOVEL OTTHUMG00000185824.1 6177 476 2 ENSG00000172345.12 STARD5 chr15 81309053 81324183 - protein_coding KNOWN OTTHUMG00000147342.3 15131 6339 24 ENSG00000259343.4 TMC3-AS1 chr15 81324377 81362037 + antisense NOVEL OTTHUMG00000172313.1 37661 1349 14 ENSG00000188869.11 TMC3 chr15 81331217 81374213 - protein_coding KNOWN OTTHUMG00000172314.3 42997 4848 63 ENSG00000273920.1 RP11-761I4.5 chr15 81335577 81336119 + antisense NOVEL OTTHUMG00000186977.1 543 543 1 ENSG00000278029.1 CTD-2240J17.2 chr15 81392759 81393384 + lincRNA NOVEL OTTHUMG00000186979.1 626 626 1 ENSG00000278448.1 CTD-2240J17.3 chr15 81393625 81394082 + lincRNA NOVEL OTTHUMG00000186980.1 458 458 1 ENSG00000231333.2 RPL34P6 chr1 200863808 200864152 + processed_pseudogene KNOWN OTTHUMG00000035783.2 345 345 1 ENSG00000275995.1 CTD-2240J17.4 chr15 81403026 81403570 + lincRNA NOVEL OTTHUMG00000186981.1 545 545 1 ENSG00000259372.2 CTD-2240J17.1 chr15 81410517 81419127 + lincRNA NOVEL OTTHUMG00000172163.2 8611 893 4 ENSG00000259543.1 CTD-2034I4.1 chr15 81427448 81755217 + lincRNA NOVEL OTTHUMG00000172164.1 327770 564 4 ENSG00000259594.4 CTD-2034I4.2 chr15 81554003 81696780 + lincRNA NOVEL OTTHUMG00000172166.1 142778 1087 8 ENSG00000259610.1 RP11-499F3.1 chr15 81633887 81642190 - lincRNA NOVEL OTTHUMG00000172169.1 8304 476 2 ENSG00000259692.4 RP11-499F3.2 chr15 81660482 81871125 - lincRNA NOVEL OTTHUMG00000172170.1 210644 767 6 ENSG00000259445.1 RP11-276M12.1 chr15 81953303 81995666 - lincRNA NOVEL OTTHUMG00000172171.1 42364 526 3 ENSG00000259622.1 RP11-597K23.1 chr15 82010212 82010607 - processed_pseudogene KNOWN OTTHUMG00000172172.1 396 396 1 ENSG00000183496.5 MEX3B chr15 82041778 82046141 - protein_coding KNOWN OTTHUMG00000147356.3 4364 4364 3 ENSG00000222521.1 AC026956.1 chr15 82044294 82044376 + miRNA NOVEL NA 83 83 1 ENSG00000170128.3 GPR25 chr1 200873038 200874123 + protein_coding KNOWN OTTHUMG00000035788.1 1086 1086 1 ENSG00000259518.1 LINC01583 chr15 82088594 82097694 + lincRNA NOVEL OTTHUMG00000172173.1 9101 2568 11 ENSG00000140598.12 EFTUD1 chr15 82130230 82262763 - protein_coding KNOWN OTTHUMG00000172573.1 132534 4733 64 ENSG00000212170.1 RNU1-77P chr15 82174224 82174385 - snRNA KNOWN NA 162 162 1 ENSG00000188659.8 FAM154B chr15 82262810 82284930 + protein_coding KNOWN OTTHUMG00000172646.1 22121 4160 23 ENSG00000274376.3 ADAMTS7P1 chr15 82298553 82334609 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000172575.4 36057 4875 28 ENSG00000278662.3 GOLGA6L10 chr15 82339998 82349475 - protein_coding KNOWN OTTHUMG00000172580.3 9478 4715 32 ENSG00000259429.4 UBE2Q2P2 chr15 82355142 82420075 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000172604.3 64934 1855 20 ENSG00000237550.5 UBE2Q2P6 chr15 82372196 82372912 - transcribed_processed_pseudogene KNOWN OTTHUMG00000158044.2 717 717 3 ENSG00000278202.1 RP11-152F13.8 chr15 82418651 82434235 + processed_transcript NOVEL OTTHUMG00000172607.3 15585 785 7 ENSG00000197978.9 GOLGA6L9 chr15 82430018 82439153 + protein_coding KNOWN OTTHUMG00000170547.4 9136 6576 17 ENSG00000163362.9 C1orf106 chr1 200891048 200915735 + protein_coding KNOWN OTTHUMG00000035789.10 24688 5413 41 ENSG00000275695.1 UBE2Q2P6 chr15 82445719 82454837 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000187868.3 9119 457 5 ENSG00000276710.3 CSPG4P8 chr15 82459472 82477258 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000170548.2 17787 7178 19 ENSG00000278603.1 RP13-608F4.5 chr15 82472203 82472426 + unprocessed_pseudogene KNOWN OTTHUMG00000188523.1 224 224 1 ENSG00000255769.6 GOLGA2P10 chr15 82472993 82513950 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000170549.4 40958 1758 36 ENSG00000221095.1 AC245033.1 chr15 82477123 82477206 - miRNA NOVEL NA 84 84 1 ENSG00000277741.3 GOLGA6L17P chr15 82519590 82526412 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000163391.4 6823 1551 13 ENSG00000259637.1 DNM1P38 chr15 82531653 82534139 - unprocessed_pseudogene KNOWN OTTHUMG00000172546.1 2487 433 3 ENSG00000182774.9 RPS17 chr15 82536753 82540564 - protein_coding KNOWN OTTHUMG00000147355.3 3812 3812 37 ENSG00000260836.1 RP11-152F13.10 chr15 82540032 82555932 - protein_coding PUTATIVE OTTHUMG00000172875.1 15901 880 8 ENSG00000278013.1 RP11-379H8.1 chr15 82540870 82562374 + lincRNA NOVEL OTTHUMG00000172876.2 21505 421 3 ENSG00000233217.1 MROH3P chr1 200920994 200966530 + unitary_pseudogene KNOWN OTTHUMG00000035782.5 45537 2625 18 ENSG00000214575.8 CPEB1 chr15 82543201 82648861 - protein_coding KNOWN OTTHUMG00000172877.4 105661 8215 154 ENSG00000259462.2 CPEB1-AS1 chr15 82647770 82692820 + antisense NOVEL OTTHUMG00000172386.2 45051 5014 5 ENSG00000103723.11 AP3B2 chr15 82659281 82709914 - protein_coding KNOWN OTTHUMG00000168009.4 50634 8866 164 ENSG00000259707.1 RP11-752G15.4 chr15 82691723 82692358 - processed_pseudogene KNOWN OTTHUMG00000172389.1 636 636 1 ENSG00000228141.5 AC105339.1 chr15 82710471 82714026 - lincRNA NOVEL OTTHUMG00000154948.3 3556 2817 9 ENSG00000259315.1 RP11-752G15.9 chr15 82725873 82738904 - transcribed_processed_pseudogene KNOWN OTTHUMG00000172407.3 13032 2096 5 ENSG00000266697.1 AC105339.2 chr15 82726550 82726633 - miRNA NOVEL NA 84 84 1 ENSG00000279758.1 RP11-752G15.10 chr15 82738386 82739122 + TEC KNOWN OTTHUMG00000173043.1 737 737 1 ENSG00000259442.1 RP11-752G15.8 chr15 82744223 82750289 + antisense NOVEL OTTHUMG00000172406.1 6067 1091 2 ENSG00000250988.6 SNHG21 chr15 82750564 82757206 + antisense NOVEL OTTHUMG00000172404.1 6643 1053 16 ENSG00000201032.1 RNU6-704P chr1 200933345 200933447 - snRNA KNOWN NA 103 103 1 ENSG00000252690.3 SCARNA15 chr15 82752884 82757208 + processed_transcript NOVEL OTTHUMG00000172405.1 4325 4325 1 ENSG00000186628.11 FSD2 chr15 82755362 82806070 - protein_coding KNOWN OTTHUMG00000172400.1 50709 6536 28 ENSG00000277864.1 SCARNA15 chr15 82755945 82756071 + scaRNA KNOWN NA 127 127 1 ENSG00000280933.1 AC105339.3 chr15 82756006 82756069 + miRNA NOVEL NA 64 64 1 ENSG00000156232.7 WHAMM chr15 82809628 82836108 + protein_coding KNOWN OTTHUMG00000172422.2 26481 5123 15 ENSG00000103942.11 HOMER2 chr15 82836946 82986153 - protein_coding KNOWN OTTHUMG00000172462.5 149208 14685 43 ENSG00000280753.1 AC044907.1 chr15 82847870 82847998 - miRNA NOVEL NA 129 129 1 ENSG00000259805.1 RP11-382A20.5 chr15 82925884 83103443 + antisense NOVEL OTTHUMG00000172770.1 177560 754 2 ENSG00000169612.3 FAM103A1 chr15 82986207 82991057 + protein_coding KNOWN OTTHUMG00000147357.1 4851 1568 4 ENSG00000169609.12 C15orf40 chr15 82988441 83011641 - protein_coding KNOWN OTTHUMG00000160473.9 23201 13893 42 ENSG00000116721.9 PRAMEF1 chr1 12791397 12796628 + protein_coding KNOWN OTTHUMG00000001928.2 5232 2439 6 ENSG00000116852.13 KIF21B chr1 200969390 201023700 - protein_coding KNOWN OTTHUMG00000035787.5 54311 12150 143 ENSG00000260608.1 RP11-382A20.7 chr15 83012661 83061845 + antisense NOVEL OTTHUMG00000172771.1 49185 421 2 ENSG00000064726.8 BTBD1 chr15 83016422 83067354 - protein_coding KNOWN OTTHUMG00000147364.4 50933 4169 26 ENSG00000273747.1 RP11-90B9.3 chr15 83020115 83020802 + antisense NOVEL OTTHUMG00000186982.1 688 688 1 ENSG00000259767.1 RP11-90B9.2 chr15 83022236 83024336 - sense_intronic NOVEL OTTHUMG00000172631.1 2101 454 2 ENSG00000260351.1 RP11-382A20.6 chr15 83022571 83090782 + antisense NOVEL OTTHUMG00000172772.1 68212 499 2 ENSG00000259308.3 RP11-382A20.1 chr15 83044368 83044771 + processed_pseudogene KNOWN OTTHUMG00000172623.3 404 404 1 ENSG00000263643.1 MIR4515 chr15 83067335 83067415 + miRNA KNOWN NA 81 81 1 ENSG00000136404.14 TM6SF1 chr15 83107407 83144854 + protein_coding KNOWN OTTHUMG00000147365.5 37448 2661 57 ENSG00000166503.7 HDGFRP3 chr15 83112738 83208018 - protein_coding KNOWN OTTHUMG00000172685.2 95281 16253 27 ENSG00000260579.1 RP11-382A20.2 chr15 83113617 83114566 - antisense NOVEL OTTHUMG00000172667.1 950 396 2 ENSG00000229191.1 RP11-168O16.1 chr1 201023949 201028792 + antisense NOVEL OTTHUMG00000035785.1 4844 3508 4 ENSG00000259986.1 RP11-382A20.4 chr15 83179182 83439445 + antisense NOVEL OTTHUMG00000172686.1 260264 943 8 ENSG00000169594.11 BNC1 chr15 83255903 83284716 - protein_coding KNOWN OTTHUMG00000147362.2 28814 4797 17 ENSG00000140600.15 SH3GL3 chr15 83447228 83618743 + protein_coding KNOWN OTTHUMG00000147361.3 171516 3363 38 ENSG00000223180.1 AC087738.1 chr15 83616186 83616258 + miRNA NOVEL NA 73 73 1 ENSG00000156218.11 ADAMTSL3 chr15 83654086 84039842 + protein_coding KNOWN OTTHUMG00000147363.3 385757 9754 111 ENSG00000212374.1 RNU6-401P chr15 83717427 83717522 + snRNA KNOWN NA 96 96 1 ENSG00000261665.2 TUBA8P2 chr15 83739784 83740199 + transcribed_processed_pseudogene KNOWN OTTHUMG00000172852.2 416 416 1 ENSG00000200444.1 RNU6-1339P chr15 83824863 83824953 - snRNA KNOWN NA 91 91 1 ENSG00000274128.1 RP11-342A23.2 chr15 83962176 83962583 + sense_intronic NOVEL OTTHUMG00000186985.1 408 408 1 ENSG00000259609.1 RP11-342A23.1 chr15 84053113 84080097 - unprocessed_pseudogene KNOWN OTTHUMG00000172492.1 26985 996 2 ENSG00000234132.2 RP11-168O16.2 chr1 201031136 201043073 + antisense NOVEL OTTHUMG00000035786.3 11938 854 7 ENSG00000259404.4 EFTUD1P1 chr15 84080168 84126604 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000172493.2 46437 1798 28 ENSG00000280038.1 DNM1P41 chr15 84166547 84169896 - TEC KNOWN OTTHUMG00000172494.1 3350 3350 1 ENSG00000259694.1 RP13-262C2.3 chr15 84171178 84173194 - lincRNA NOVEL OTTHUMG00000172495.1 2017 546 2 ENSG00000259511.1 UBE2Q2L chr15 84172490 84182234 + protein_coding PUTATIVE OTTHUMG00000172496.1 9745 499 3 ENSG00000259726.1 CSPG4P11 chr15 84186752 84197384 + unprocessed_pseudogene KNOWN OTTHUMG00000172497.1 10633 4910 7 ENSG00000225151.9 GOLGA2P7 chr15 84199311 84230136 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000133525.2 30826 4915 50 ENSG00000221008.1 AC136698.1 chr15 84204516 84204599 - miRNA NOVEL NA 84 84 1 ENSG00000278422.1 Metazoa_SRP chr15 84205454 84205700 - misc_RNA NOVEL NA 247 247 1 ENSG00000184206.10 GOLGA6L4 chr15 84235773 84245368 + protein_coding KNOWN OTTHUMG00000163050.2 9596 6065 30 ENSG00000259633.1 UBE2Q2P8 chr15 84255913 84256014 + unprocessed_pseudogene KNOWN OTTHUMG00000172498.1 102 102 1 ENSG00000081248.9 CACNA1S chr1 201039512 201112566 - protein_coding KNOWN OTTHUMG00000035784.2 73055 6168 87 ENSG00000259683.1 RP11-182J1.14 chr15 84389729 84395903 + unprocessed_pseudogene KNOWN OTTHUMG00000172499.1 6175 970 9 ENSG00000244056.3 RN7SL417P chr15 84394072 84394336 + misc_RNA KNOWN NA 265 265 1 ENSG00000259570.1 RP11-671M22.4 chr15 84394512 84395514 + unprocessed_pseudogene KNOWN OTTHUMG00000172500.1 1003 389 4 ENSG00000221247.1 AC243562.1 chr15 84395179 84395262 + miRNA NOVEL NA 84 84 1 ENSG00000235370.6 DNM1P51 chr15 84398316 84411701 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000172438.1 13386 8796 6 ENSG00000272887.1 CSPG4P5 chr15 84401807 84408005 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000172439.2 6199 3730 3 ENSG00000259538.1 UBE2Q2P11 chr15 84412773 84421837 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000185780.1 9065 205 2 ENSG00000259774.1 RP11-182J1.13 chr15 84422618 84425882 + lincRNA NOVEL OTTHUMG00000172441.1 3265 1212 4 ENSG00000278785.1 Metazoa_SRP chr15 84467901 84468147 + misc_RNA NOVEL NA 247 247 1 ENSG00000273531.1 AC243562.2 chr15 84468965 84469048 + miRNA NOVEL NA 84 84 1 ENSG00000232237.3 ASCL5 chr1 201113953 201127184 - protein_coding KNOWN OTTHUMG00000057661.3 13232 2026 3 ENSG00000197627.3 UBE2Q2P12 chr15 84491480 84500599 - unprocessed_pseudogene KNOWN OTTHUMG00000148661.1 9120 204 2 ENSG00000259551.1 RP11-182J1.10 chr15 84500378 84502381 + lincRNA NOVEL OTTHUMG00000172442.1 2004 546 2 ENSG00000259302.1 RP11-182J1.11 chr15 84505463 84505495 + unprocessed_pseudogene KNOWN OTTHUMG00000172443.1 33 33 1 ENSG00000230373.7 GOLGA6L5P chr15 84507885 84516814 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000148659.2 8930 3899 18 ENSG00000259244.1 RP11-182J1.12 chr15 84513241 84526949 - processed_transcript NOVEL OTTHUMG00000172444.1 13709 492 5 ENSG00000189136.7 UBE2Q2P1 chr15 84526781 84571216 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000148662.2 44436 3008 35 ENSG00000259728.4 LINC00933 chr15 84570649 84580175 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000172445.1 9527 3000 14 ENSG00000275120.1 RP11-182J1.17 chr15 84599434 84606463 - antisense NOVEL OTTHUMG00000186987.1 7030 598 3 ENSG00000176371.12 ZSCAN2 chr15 84600986 84627796 + protein_coding KNOWN OTTHUMG00000074027.3 26811 4878 45 ENSG00000256278.1 RP11-182J1.5 chr15 84611689 84614969 - antisense NOVEL OTTHUMG00000167913.1 3281 1018 2 ENSG00000116857.15 TMEM9 chr1 201134772 201171574 - protein_coding KNOWN OTTHUMG00000035831.6 36803 3915 59 ENSG00000276278.1 RP11-182J1.3 chr15 84622015 84623237 - antisense NOVEL OTTHUMG00000167914.1 1223 1223 1 ENSG00000176700.18 SCAND2P chr15 84631451 84647478 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000166569.5 16028 10717 30 ENSG00000254414.1 RP11-182J1.1 chr15 84631898 84633987 - antisense NOVEL OTTHUMG00000166531.1 2090 845 2 ENSG00000254779.4 EGLN1P1 chr15 84633874 84634635 + transcribed_processed_pseudogene KNOWN OTTHUMG00000166918.3 762 762 1 ENSG00000177082.11 WDR73 chr15 84639281 84654343 - protein_coding KNOWN OTTHUMG00000172375.2 15063 9626 117 ENSG00000277578.1 Metazoa_SRP chr15 84642487 84642763 - misc_RNA NOVEL NA 277 277 1 ENSG00000197696.8 NMB chr15 84655129 84658563 - protein_coding KNOWN OTTHUMG00000148666.1 3435 1022 6 ENSG00000140612.12 SEC11A chr15 84669538 84716716 - protein_coding KNOWN OTTHUMG00000172489.3 47179 5748 50 ENSG00000259654.1 RP11-245C17.2 chr15 84685884 84686946 + antisense NOVEL OTTHUMG00000172501.1 1063 487 2 ENSG00000166716.8 ZNF592 chr15 84748635 84806432 + protein_coding KNOWN OTTHUMG00000172490.3 57798 8134 30 ENSG00000163395.15 IGFN1 chr1 201190825 201228952 + protein_coding KNOWN OTTHUMG00000035728.5 38128 12116 102 ENSG00000259415.1 RP11-7M10.2 chr15 84753122 84754502 + sense_intronic NOVEL OTTHUMG00000172491.1 1381 429 2 ENSG00000136383.6 ALPK3 chr15 84816680 84873482 + protein_coding KNOWN OTTHUMG00000148667.2 56803 10940 18 ENSG00000200991.1 SNORA25 chr15 84852498 84852615 - snoRNA NOVEL NA 118 118 1 ENSG00000156222.10 SLC28A1 chr15 84884654 84945796 + protein_coding KNOWN OTTHUMG00000148668.3 61143 3445 59 ENSG00000207037.1 RNU6-339P chr15 84938416 84938522 - snRNA KNOWN NA 107 107 1 ENSG00000212388.1 RNU6-796P chr15 84939617 84939723 - snRNA KNOWN NA 107 107 1 ENSG00000271044.1 RP11-255M6.1 chr15 84940504 84941133 - processed_pseudogene KNOWN OTTHUMG00000184835.1 630 630 1 ENSG00000073417.13 PDE8A chr15 84980440 85139145 + protein_coding KNOWN OTTHUMG00000148670.4 158706 7886 206 ENSG00000259270.1 RP11-561C5.1 chr15 85178628 85178806 - processed_pseudogene KNOWN OTTHUMG00000172139.1 179 179 1 ENSG00000259449.1 NIFKP8 chr15 85181210 85182083 - processed_pseudogene KNOWN OTTHUMG00000172140.1 874 874 1 ENSG00000229821.1 RP11-567E21.3 chr1 201222113 201223123 - antisense NOVEL OTTHUMG00000040658.1 1011 771 2 ENSG00000259295.5 CSPG4P12 chr15 85191438 85213905 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000172141.1 22468 11495 15 ENSG00000229212.6 RP11-561C5.4 chr15 85205440 85234795 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000172142.1 29356 1646 25 ENSG00000221266.1 AC044860.1 chr15 85209115 85209198 - miRNA NOVEL NA 84 84 1 ENSG00000277582.1 Metazoa_SRP chr15 85210053 85210299 - misc_RNA NOVEL NA 247 247 1 ENSG00000188388.10 GOLGA6L3 chr15 85240472 85247170 + unprocessed_pseudogene KNOWN OTTHUMG00000163478.1 6699 1679 9 ENSG00000218052.5 ADAMTS7P4 chr15 85255369 85330334 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000172143.2 74966 5516 26 ENSG00000259317.1 RP11-561C5.7 chr15 85272527 85272974 + unprocessed_pseudogene KNOWN OTTHUMG00000172148.1 448 368 2 ENSG00000170776.18 AKAP13 chr15 85380571 85749358 + protein_coding KNOWN OTTHUMG00000172205.2 368788 20280 233 ENSG00000276648.1 MIR7706 chr15 85380596 85380662 + miRNA KNOWN NA 67 67 1 ENSG00000251891.1 RNU7-79P chr15 85389823 85389884 - snRNA KNOWN NA 62 62 1 ENSG00000081277.10 PKP1 chr1 201283452 201332993 + protein_coding KNOWN OTTHUMG00000035729.2 49542 6211 67 ENSG00000259630.2 CTD-2262B20.1 chr15 85415228 85415633 + transcribed_processed_pseudogene KNOWN OTTHUMG00000172209.2 406 406 1 ENSG00000259375.1 RP11-815J21.2 chr15 85579046 85580178 - antisense NOVEL OTTHUMG00000172210.1 1133 953 2 ENSG00000259367.1 RP11-815J21.4 chr15 85619623 85670948 - antisense NOVEL OTTHUMG00000172211.1 51326 660 2 ENSG00000259276.1 RP11-815J21.3 chr15 85621264 85627689 - antisense NOVEL OTTHUMG00000172212.1 6426 568 3 ENSG00000202081.1 RNU6-1280P chr15 85651522 85651628 - snRNA KNOWN NA 107 107 1 ENSG00000259453.1 RP11-815J21.1 chr15 85701109 85702771 + sense_intronic NOVEL OTTHUMG00000172206.1 1663 746 2 ENSG00000259544.1 RP11-158M2.2 chr15 85726115 85727227 - antisense NOVEL OTTHUMG00000172213.1 1113 569 2 ENSG00000259407.1 RP11-158M2.3 chr15 85744109 85750281 - antisense NOVEL OTTHUMG00000172214.1 6173 964 3 ENSG00000259762.1 RP11-158M2.4 chr15 85750336 85752901 - antisense NOVEL OTTHUMG00000172215.1 2566 494 2 ENSG00000259416.2 RP11-158M2.5 chr15 85754941 85756237 - antisense NOVEL OTTHUMG00000172216.2 1297 855 3 ENSG00000118194.17 TNNT2 chr1 201359008 201377762 - protein_coding KNOWN OTTHUMG00000035733.3 18755 7259 263 ENSG00000183655.12 KLHL25 chr15 85759323 85795030 - protein_coding KNOWN OTTHUMG00000148672.3 35708 7219 6 ENSG00000221634.1 MIR1276 chr15 85770496 85770578 - miRNA KNOWN NA 83 83 1 ENSG00000259195.1 RP11-158M2.6 chr15 85770990 85771163 + processed_pseudogene KNOWN OTTHUMG00000172217.1 174 174 1 ENSG00000252931.1 RNU6-231P chr15 85821855 85821957 + snRNA KNOWN NA 103 103 1 ENSG00000264406.1 MIR548AP chr15 85825635 85825730 + miRNA KNOWN NA 96 96 1 ENSG00000259608.1 RP11-23A22.1 chr15 85958717 85958971 - processed_pseudogene KNOWN OTTHUMG00000172156.1 255 255 1 ENSG00000260758.1 RP11-553E24.3 chr15 86078743 86079792 - lincRNA NOVEL OTTHUMG00000172869.1 1050 339 2 ENSG00000260477.5 LINC01584 chr15 86083345 86116717 - lincRNA NOVEL OTTHUMG00000172870.2 33373 1427 16 ENSG00000252964.1 RNA5SP400 chr15 86138269 86138379 - rRNA KNOWN NA 111 111 1 ENSG00000261077.1 RP11-553E24.1 chr15 86139838 86140240 - processed_pseudogene KNOWN OTTHUMG00000172871.1 403 403 1 ENSG00000228338.1 RP5-845O24.8 chr1 12822686 12823159 - lincRNA NOVEL OTTHUMG00000041465.1 474 378 2 ENSG00000159166.12 LAD1 chr1 201373244 201399608 - protein_coding KNOWN OTTHUMG00000035737.2 26365 3237 34 ENSG00000166748.11 AGBL1 chr15 86141996 87029052 + protein_coding KNOWN OTTHUMG00000149978.5 887057 4481 64 ENSG00000200206.1 SNORD74 chr15 86173198 86173270 - snoRNA NOVEL NA 73 73 1 ENSG00000260125.1 AGBL1-AS1 chr15 86295649 86317173 - antisense NOVEL OTTHUMG00000172872.1 21525 2440 9 ENSG00000259734.1 RP11-182L7.1 chr15 86630266 86631136 - antisense NOVEL OTTHUMG00000171963.1 871 499 2 ENSG00000273540.1 RP11-133L19.3 chr15 86914443 86916155 + sense_intronic NOVEL OTTHUMG00000172873.1 1713 1713 1 ENSG00000281239.1 AC016987.1 chr15 86931559 86931652 - miRNA NOVEL NA 94 94 1 ENSG00000259636.1 RP11-133L19.2 chr15 86932880 86946331 + sense_intronic NOVEL OTTHUMG00000171909.1 13452 351 3 ENSG00000259620.1 RP11-133L19.1 chr15 86938797 86988426 - antisense NOVEL OTTHUMG00000171910.1 49630 499 3 ENSG00000259761.1 RP11-138H10.2 chr15 87042054 87047161 + lincRNA NOVEL OTTHUMG00000171911.1 5108 509 2 ENSG00000259560.1 RP11-648K4.2 chr15 87432058 87703852 - lincRNA NOVEL OTTHUMG00000171973.1 271795 448 6 ENSG00000159173.17 TNNI1 chr1 201403768 201429866 - protein_coding KNOWN OTTHUMG00000035736.5 26099 7524 61 ENSG00000207150.1 RNU6-185P chr15 87474183 87474289 - snRNA KNOWN NA 107 107 1 ENSG00000259527.2 LINC00052 chr15 87576929 87579866 + lincRNA KNOWN OTTHUMG00000171964.2 2938 1966 3 ENSG00000140538.15 NTRK3 chr15 87859751 88256768 - protein_coding KNOWN OTTHUMG00000148677.11 397018 26750 223 ENSG00000259183.1 MED28P6 chr15 88143935 88144165 - processed_pseudogene KNOWN OTTHUMG00000171833.1 231 231 1 ENSG00000260305.1 NTRK3-AS1 chr15 88252730 88271066 + lincRNA NOVEL OTTHUMG00000173016.1 18337 2663 4 ENSG00000259494.1 MRPL46 chr15 88459476 88467419 - protein_coding KNOWN OTTHUMG00000148683.3 7944 6432 14 ENSG00000173867.8 RP11-97O12.7 chr15 88459717 88512529 - processed_transcript NOVEL OTTHUMG00000185776.1 52813 1179 8 ENSG00000181991.14 MRPS11 chr15 88467453 88480773 + protein_coding KNOWN OTTHUMG00000148678.4 13321 5625 45 ENSG00000279945.1 RP11-97O12.5 chr15 88477871 88478387 - TEC KNOWN OTTHUMG00000176606.1 517 517 1 ENSG00000271997.1 RP11-97O12.6 chr15 88501944 88505787 - sense_intronic NOVEL OTTHUMG00000185777.1 3844 3844 1 ENSG00000227048.2 RP11-134G8.2 chr1 201428975 201429361 + processed_pseudogene KNOWN OTTHUMG00000035768.2 387 387 1 ENSG00000140543.12 DET1 chr15 88511559 88546675 - protein_coding KNOWN OTTHUMG00000171851.3 35117 2658 34 ENSG00000259569.2 RP11-97O12.3 chr15 88568287 88568562 + processed_pseudogene KNOWN OTTHUMG00000172505.2 276 276 1 ENSG00000249487.5 LINC01586 chr15 88585566 88605110 - lincRNA NOVEL OTTHUMG00000171852.2 19545 2190 8 ENSG00000221630.2 MIR1179 chr15 88608101 88608211 + miRNA KNOWN NA 111 111 1 ENSG00000207703.1 MIR7-2 chr15 88611825 88611934 + miRNA KNOWN NA 110 110 1 ENSG00000181026.14 AEN chr15 88621296 88632282 + protein_coding KNOWN OTTHUMG00000148681.5 10987 6018 14 ENSG00000172183.13 ISG20 chr15 88636153 88656483 + protein_coding KNOWN OTTHUMG00000148679.2 20331 7363 35 ENSG00000259676.1 RP11-343B18.2 chr15 88797413 88798734 - lincRNA NOVEL OTTHUMG00000172506.1 1322 571 2 ENSG00000157766.14 ACAN chr15 88803443 88875354 + protein_coding KNOWN OTTHUMG00000171989.3 71912 10908 105 ENSG00000140511.10 HAPLN3 chr15 88877288 88895626 - protein_coding KNOWN OTTHUMG00000148680.4 18339 3524 25 ENSG00000174307.6 PHLDA3 chr1 201464383 201469237 - protein_coding KNOWN OTTHUMG00000035767.3 4855 3138 10 ENSG00000140545.13 MFGE8 chr15 88898683 88913411 - protein_coding KNOWN OTTHUMG00000148682.7 14729 6837 75 ENSG00000259350.2 RP11-63A23.2 chr15 88952683 88953460 + processed_pseudogene KNOWN OTTHUMG00000172507.2 778 470 2 ENSG00000259489.2 KRT18P47 chr15 88960070 88961046 + processed_pseudogene KNOWN OTTHUMG00000171974.2 977 977 1 ENSG00000265866.1 AC067805.1 chr15 88972401 88972452 - miRNA NOVEL NA 52 52 1 ENSG00000261549.2 RP11-320A16.1 chr15 88989519 88990245 - processed_pseudogene KNOWN OTTHUMG00000176608.2 727 727 1 ENSG00000260275.1 RP11-326A19.2 chr15 89037977 89038286 - processed_pseudogene KNOWN OTTHUMG00000172880.1 310 310 1 ENSG00000260123.1 RP11-326A19.4 chr15 89041223 89082819 + lincRNA NOVEL OTTHUMG00000172881.1 41597 597 4 ENSG00000261407.1 RP11-326A19.3 chr15 89087078 89088267 - antisense NOVEL OTTHUMG00000172882.1 1190 644 4 ENSG00000140526.15 ABHD2 chr15 89087459 89202360 + protein_coding KNOWN OTTHUMG00000148684.3 114902 10345 76 ENSG00000239151.1 RNU7-195P chr15 89120779 89120840 + snRNA KNOWN NA 62 62 1 ENSG00000224818.1 RP11-134G8.10 chr1 201464383 201465146 - 3prime_overlapping_ncrna NOVEL OTTHUMG00000189503.1 764 598 2 ENSG00000259699.2 HMGB1P8 chr15 89135547 89136495 - processed_pseudogene KNOWN OTTHUMG00000171990.2 949 949 1 ENSG00000259948.2 RP11-326A19.5 chr15 89201091 89201768 - processed_pseudogene KNOWN OTTHUMG00000172883.2 678 678 1 ENSG00000140522.10 RLBP1 chr15 89209869 89221751 - protein_coding KNOWN OTTHUMG00000172884.1 11883 1985 22 ENSG00000140525.16 FANCI chr15 89243949 89317261 + protein_coding KNOWN OTTHUMG00000132993.6 73313 7766 231 ENSG00000140521.10 POLG chr15 89316305 89334861 - protein_coding KNOWN OTTHUMG00000149646.5 18557 5640 110 ENSG00000275101.1 MIR6766 chr15 89326739 89326810 - miRNA KNOWN NA 72 72 1 ENSG00000261441.1 RP11-217B1.2 chr15 89335053 89336161 + antisense NOVEL OTTHUMG00000172885.2 1109 1109 3 ENSG00000279708.1 CTD-2335A18.2 chr15 89358841 89360377 + TEC KNOWN OTTHUMG00000173068.1 1537 1537 1 ENSG00000255571.5 LINC00925 chr15 89361579 89398487 + lincRNA NOVEL OTTHUMG00000171992.6 36909 7265 62 ENSG00000207819.1 MIR9-3 chr15 89368017 89368106 + miRNA KNOWN NA 90 90 1 ENSG00000159176.12 CSRP1 chr1 201483530 201509456 - protein_coding KNOWN OTTHUMG00000035773.3 25927 10318 88 ENSG00000140519.11 RHCG chr15 89471398 89496613 - protein_coding KNOWN OTTHUMG00000149647.5 25216 2607 48 ENSG00000259218.4 LINC00928 chr15 89505277 89524034 - lincRNA NOVEL OTTHUMG00000172014.2 18758 1487 13 ENSG00000261478.1 RP11-429B14.4 chr15 89508961 89510416 + lincRNA NOVEL OTTHUMG00000173032.1 1456 1456 1 ENSG00000259713.1 RP11-429B14.1 chr15 89518523 89591956 + sense_overlapping NOVEL OTTHUMG00000171993.1 73434 501 2 ENSG00000140534.12 TICRR chr15 89575482 89631056 + protein_coding KNOWN OTTHUMG00000149648.5 55575 8402 48 ENSG00000259615.1 RP11-429B14.3 chr15 89579765 89582297 - antisense NOVEL OTTHUMG00000172015.1 2533 459 2 ENSG00000166813.13 KIF7 chr15 89608789 89655451 - protein_coding KNOWN OTTHUMG00000157177.3 46663 5001 27 ENSG00000166819.10 PLIN1 chr15 89664365 89679427 - protein_coding KNOWN OTTHUMG00000149813.4 15063 3797 23 ENSG00000166821.7 PEX11A chr15 89677764 89690783 - protein_coding KNOWN OTTHUMG00000149809.5 13020 3171 14 ENSG00000241362.2 RPL36AP43 chr15 89687937 89688243 - processed_pseudogene KNOWN OTTHUMG00000158054.3 307 307 1 ENSG00000224536.1 RP11-134G8.7 chr1 201507241 201533608 + antisense NOVEL OTTHUMG00000035772.1 26368 340 2 ENSG00000140527.13 WDR93 chr15 89690797 89743638 + protein_coding KNOWN OTTHUMG00000172007.3 52842 4068 54 ENSG00000259561.1 RP11-300G22.2 chr15 89704665 89705415 + sense_intronic NOVEL OTTHUMG00000172008.1 751 449 2 ENSG00000206590.1 RNU6-132P chr15 89714232 89714338 + snRNA KNOWN NA 107 107 1 ENSG00000166823.5 MESP1 chr15 89748661 89751310 - protein_coding KNOWN OTTHUMG00000149810.2 2650 2369 4 ENSG00000259441.2 MRPL15P1 chr15 89752296 89753493 + processed_pseudogene KNOWN OTTHUMG00000172017.4 1198 878 2 ENSG00000188095.4 MESP2 chr15 89760591 89778754 + protein_coding KNOWN OTTHUMG00000172016.3 18164 1783 7 ENSG00000166825.12 ANPEP chr15 89784889 89815401 - protein_coding KNOWN OTTHUMG00000149814.5 30513 4871 54 ENSG00000157823.15 AP3S2 chr15 89830599 89894638 - protein_coding KNOWN OTTHUMG00000149811.4 64040 9237 74 ENSG00000250021.6 C15orf38-AP3S2 chr15 89834308 89912882 - protein_coding KNOWN OTTHUMG00000162161.4 78575 2673 26 ENSG00000264966.1 MIR5094 chr15 89850637 89850721 - miRNA KNOWN NA 85 85 1 ENSG00000223396.2 RP11-134G8.5 chr1 201518703 201530474 + lincRNA NOVEL OTTHUMG00000035770.1 11772 2329 2 ENSG00000259677.1 RP11-493E3.1 chr15 89876540 89877285 + processed_pseudogene KNOWN OTTHUMG00000172018.2 746 746 1 ENSG00000264796.1 MIR5009 chr15 89883931 89884030 - miRNA KNOWN NA 100 100 1 ENSG00000212420.1 RNU6-1111P chr15 89886485 89886591 - snRNA KNOWN NA 107 107 1 ENSG00000242498.6 ARPIN chr15 89895006 89912956 - protein_coding KNOWN OTTHUMG00000154515.4 17951 8594 14 ENSG00000252645.1 RNU7-111P chr15 89897576 89897637 + snRNA KNOWN NA 62 62 1 ENSG00000259273.1 RP11-493E3.2 chr15 89936492 89937005 + processed_pseudogene KNOWN OTTHUMG00000172019.2 514 514 1 ENSG00000280377.1 RP11-493E3.3 chr15 89950760 89951345 + TEC KNOWN OTTHUMG00000173132.1 586 586 1 ENSG00000140548.8 ZNF710 chr15 90001392 90082206 + protein_coding KNOWN OTTHUMG00000149812.3 80815 4936 15 ENSG00000265871.1 MIR3174 chr15 90006755 90006841 + miRNA KNOWN NA 87 87 1 ENSG00000273691.1 RP11-617F23.2 chr15 90024955 90026003 + sense_intronic NOVEL OTTHUMG00000172202.1 1049 1049 1 ENSG00000242150.2 RP11-134G8.6 chr1 201520056 201520549 + transcribed_processed_pseudogene KNOWN OTTHUMG00000035771.2 494 494 1 ENSG00000259291.2 RP11-617F23.1 chr15 90074512 90082207 - antisense NOVEL OTTHUMG00000172032.2 7696 2902 3 ENSG00000276376.1 U7 chr15 90076424 90076486 + snRNA NOVEL NA 63 63 1 ENSG00000182054.8 IDH2 chr15 90083045 90102504 - protein_coding KNOWN OTTHUMG00000149815.2 19460 2814 39 ENSG00000259685.2 CTD-2315E11.1 chr15 90102649 90133445 + lincRNA NOVEL OTTHUMG00000172203.2 30797 355 4 ENSG00000185033.13 SEMA4B chr15 90160604 90229679 + protein_coding KNOWN OTTHUMG00000172096.5 69076 7006 113 ENSG00000240470.3 RN7SL346P chr15 90166233 90166526 + misc_RNA KNOWN NA 294 294 1 ENSG00000225193.5 RPS12P26 chr15 90206572 90206967 + transcribed_processed_pseudogene KNOWN OTTHUMG00000158056.4 396 396 1 ENSG00000185043.9 CIB1 chr15 90229975 90234047 - protein_coding KNOWN OTTHUMG00000149808.1 4073 1367 14 ENSG00000183208.11 GDPGP1 chr15 90233808 90245811 + protein_coding KNOWN OTTHUMG00000172128.3 12004 5778 18 ENSG00000213471.7 TTLL13P chr15 90249530 90265482 + unitary_pseudogene KNOWN OTTHUMG00000177210.2 15953 3902 47 ENSG00000134369.14 NAV1 chr1 201622885 201826969 + protein_coding KNOWN OTTHUMG00000035766.6 204085 22453 138 ENSG00000261147.1 RP11-697E2.6 chr15 90249556 90272208 + protein_coding NOVEL OTTHUMG00000177211.1 22653 3838 13 ENSG00000182768.8 NGRN chr15 90265659 90278141 + protein_coding KNOWN OTTHUMG00000149807.3 12483 7694 7 ENSG00000275674.1 RP11-697E2.12 chr15 90266317 90314499 + protein_coding NOVEL OTTHUMG00000189108.1 48183 518 4 ENSG00000228998.4 RP11-697E2.7 chr15 90275129 90275716 + transcribed_processed_pseudogene KNOWN OTTHUMG00000177212.2 588 588 1 ENSG00000270322.1 RP11-697E2.10 chr15 90281848 90282031 - unprocessed_pseudogene KNOWN OTTHUMG00000184838.1 184 184 1 ENSG00000275345.1 RP11-697E2.11 chr15 90281858 90282270 + lincRNA NOVEL OTTHUMG00000187008.1 413 413 1 ENSG00000271396.1 RP11-697E2.9 chr15 90284376 90285580 - processed_pseudogene KNOWN OTTHUMG00000184839.1 1205 894 2 ENSG00000214433.4 GOLGA2P8 chr15 90291962 90295683 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000163474.1 3722 779 6 ENSG00000275803.1 Metazoa_SRP chr15 90293939 90294207 + misc_RNA NOVEL NA 269 269 1 ENSG00000280965.1 AC091167.2 chr15 90294059 90294142 + miRNA NOVEL NA 84 84 1 ENSG00000239810.3 PRAMEF11 chr1 12824605 12831410 - protein_coding KNOWN OTTHUMG00000001929.5 6806 1845 4 ENSG00000236390.1 RP11-25B7.1 chr1 201673105 201674144 - antisense NOVEL OTTHUMG00000035804.1 1040 579 2 ENSG00000221309.1 AC091167.1 chr15 90295041 90295123 + miRNA NOVEL NA 83 83 1 ENSG00000279980.1 GABARAPL3 chr15 90347587 90349437 + TEC KNOWN OTTHUMG00000177213.1 1851 1851 1 ENSG00000238244.3 GABARAPL3 chr15 90348844 90349197 - processed_pseudogene KNOWN OTTHUMG00000189344.1 354 354 1 ENSG00000196391.9 ZNF774 chr15 90352245 90369146 + protein_coding KNOWN OTTHUMG00000172359.2 16902 8511 20 ENSG00000259262.1 NDUFA3P4 chr15 90385814 90386063 + processed_pseudogene KNOWN OTTHUMG00000172360.2 250 250 1 ENSG00000140575.11 IQGAP1 chr15 90388218 90502243 + protein_coding KNOWN OTTHUMG00000149832.3 114026 11487 108 ENSG00000259177.1 RP11-154B12.3 chr15 90393490 90397881 - antisense NOVEL OTTHUMG00000172361.1 4392 458 2 ENSG00000140577.14 CRTC3 chr15 90529925 90645345 + protein_coding KNOWN OTTHUMG00000172295.3 115421 10814 80 ENSG00000259212.1 CTD-3065B20.2 chr15 90595840 90596447 - antisense NOVEL OTTHUMG00000172333.1 608 474 2 ENSG00000259314.1 CTD-3065B20.3 chr15 90604225 90614558 - antisense NOVEL OTTHUMG00000172334.1 10334 807 3 ENSG00000231871.4 IPO9-AS1 chr1 201688259 201829559 - antisense NOVEL OTTHUMG00000035809.1 141301 1274 9 ENSG00000259736.1 CRTC3-AS1 chr15 90620007 90717141 - antisense NOVEL OTTHUMG00000172335.1 97135 957 7 ENSG00000259746.1 HSPE1P3 chr15 90634725 90635033 + processed_pseudogene KNOWN OTTHUMG00000172336.1 309 309 1 ENSG00000278370.1 RP11-387D10.4 chr15 90650631 90651103 + lincRNA NOVEL OTTHUMG00000187011.1 473 473 1 ENSG00000245479.2 LINC01585 chr15 90660234 90664967 + sense_overlapping NOVEL OTTHUMG00000172362.1 4734 1295 5 ENSG00000197299.9 BLM chr15 90717327 90816165 + protein_coding KNOWN OTTHUMG00000149834.4 98839 6551 102 ENSG00000200677.1 SNORD18 chr15 90755243 90755312 - snoRNA NOVEL NA 70 70 1 ENSG00000259704.1 CTD-3094K11.1 chr15 90839724 90841378 + sense_overlapping NOVEL OTTHUMG00000172372.1 1655 402 2 ENSG00000241869.3 RN7SL363P chr15 90855935 90856207 - misc_RNA KNOWN NA 273 273 1 ENSG00000140564.9 FURIN chr15 90868592 90883458 + protein_coding KNOWN OTTHUMG00000149831.2 14867 4728 64 ENSG00000182511.10 FES chr15 90883695 90895776 + protein_coding KNOWN OTTHUMG00000044456.5 12082 4237 145 ENSG00000264802.1 MIR5191 chr1 201719508 201719627 + miRNA KNOWN NA 120 120 1 ENSG00000196547.13 MAN2A2 chr15 90902218 90922584 + protein_coding KNOWN OTTHUMG00000172385.13 20367 10002 223 ENSG00000259661.1 AC068831.15 chr15 90920218 90921186 - antisense NOVEL OTTHUMG00000172402.1 969 795 2 ENSG00000184508.9 HDDC3 chr15 90929964 90932569 - protein_coding KNOWN OTTHUMG00000141260.4 2606 2606 20 ENSG00000140553.15 UNC45A chr15 90930180 90954093 + protein_coding KNOWN OTTHUMG00000141261.4 23914 7498 106 ENSG00000224441.1 AC068831.3 chr15 90932586 90935130 - antisense NOVEL OTTHUMG00000141259.1 2545 367 4 ENSG00000258384.1 AC068831.6 chr15 90952239 90955225 - antisense NOVEL OTTHUMG00000171683.1 2987 1858 2 ENSG00000166965.11 RCCD1 chr15 90954870 90963125 + protein_coding KNOWN OTTHUMG00000171684.3 8256 4969 50 ENSG00000198901.12 PRC1 chr15 90966038 90995629 - protein_coding KNOWN OTTHUMG00000171685.6 29592 5525 109 ENSG00000258725.1 PRC1-AS1 chr15 90966345 90988624 + antisense NOVEL OTTHUMG00000171686.1 22280 1799 6 ENSG00000200142.1 Y_RNA chr15 90977208 90977305 - misc_RNA NOVEL NA 98 98 1 ENSG00000235121.1 RP11-90L20.2 chr1 201723294 201737506 - antisense NOVEL OTTHUMG00000035769.1 14213 1809 2 ENSG00000184056.13 VPS33B chr15 90998416 91022603 - protein_coding KNOWN OTTHUMG00000149835.5 24188 4012 93 ENSG00000214432.8 AC068831.10 chr15 91022619 91036611 + antisense NOVEL OTTHUMG00000171687.2 13993 3429 15 ENSG00000278514.1 AC068831.16 chr15 91022766 91023200 + lincRNA NOVEL OTTHUMG00000187012.1 435 435 1 ENSG00000258542.1 AC068831.11 chr15 91029888 91029996 + transcribed_processed_pseudogene KNOWN OTTHUMG00000171688.1 109 109 1 ENSG00000275929.1 AC068831.17 chr15 91031246 91031691 - unprocessed_pseudogene KNOWN OTTHUMG00000187873.1 446 363 2 ENSG00000258665.1 AC068831.12 chr15 91031712 91032435 - unprocessed_pseudogene KNOWN OTTHUMG00000171689.1 724 328 3 ENSG00000185518.10 SV2B chr15 91099950 91301309 + protein_coding KNOWN OTTHUMG00000149833.4 201360 12454 57 ENSG00000258551.4 RP11-661P17.1 chr15 91408708 91605211 + lincRNA NOVEL OTTHUMG00000171693.1 196504 2609 7 ENSG00000258954.1 RP11-692C24.1 chr15 91532891 91535095 + lincRNA NOVEL OTTHUMG00000171694.1 2205 431 2 ENSG00000258765.1 RP11-692C24.2 chr15 91643017 91649114 - lincRNA NOVEL OTTHUMG00000171695.1 6098 592 3 ENSG00000200942.1 RNU6-501P chr1 201733406 201733505 + snRNA KNOWN NA 100 100 1 ENSG00000258540.1 RP11-692C24.3 chr15 91676771 91677060 + processed_pseudogene KNOWN OTTHUMG00000171696.1 290 290 1 ENSG00000259057.1 CTD-2343P13.1 chr15 91742841 91743955 - processed_pseudogene KNOWN OTTHUMG00000171697.1 1115 1115 1 ENSG00000176463.12 SLCO3A1 chr15 91853695 92172435 + protein_coding KNOWN OTTHUMG00000149846.4 318741 9435 71 ENSG00000260661.1 RP11-152L20.3 chr15 92148752 92331037 - antisense NOVEL OTTHUMG00000177214.1 182286 1304 4 ENSG00000258761.1 RP11-24J19.1 chr15 92162798 92172436 - antisense NOVEL OTTHUMG00000171700.1 9639 539 2 ENSG00000258726.1 DUXAP6 chr15 92281484 92282084 + processed_pseudogene KNOWN OTTHUMG00000171701.1 601 601 1 ENSG00000258925.2 NPM1P5 chr15 92285841 92286678 + processed_pseudogene KNOWN OTTHUMG00000171702.2 838 838 1 ENSG00000140557.10 ST8SIA2 chr15 92393828 92468728 + protein_coding KNOWN OTTHUMG00000149843.3 74901 5903 19 ENSG00000239197.1 snoU109 chr15 92417547 92417689 + snoRNA NOVEL NA 143 143 1 ENSG00000258739.1 ENO1P2 chr15 92420860 92422735 + transcribed_processed_pseudogene KNOWN OTTHUMG00000171740.1 1876 974 2 ENSG00000221028.1 MIR1231 chr1 201808611 201808702 + miRNA KNOWN NA 92 92 1 ENSG00000259170.1 RP11-763K15.1 chr15 92470233 92471546 - lincRNA NOVEL OTTHUMG00000171741.1 1314 480 2 ENSG00000183643.4 C15orf32 chr15 92471654 92501117 + lincRNA KNOWN OTTHUMG00000149844.3 29464 1787 6 ENSG00000258647.4 LINC00930 chr15 92567818 92572042 - lincRNA NOVEL OTTHUMG00000171742.1 4225 1657 7 ENSG00000258676.4 RP11-386M24.3 chr15 92580829 92600545 + processed_transcript NOVEL OTTHUMG00000171743.2 19717 2194 4 ENSG00000260337.3 RP11-386M24.6 chr15 92592574 92596462 - processed_transcript NOVEL OTTHUMG00000173074.2 3889 3889 3 ENSG00000271763.1 RP11-386M24.9 chr15 92602910 92620015 + antisense NOVEL OTTHUMG00000185771.1 17106 446 2 ENSG00000185442.11 FAM174B chr15 92617443 92809884 - protein_coding KNOWN OTTHUMG00000171744.3 192442 4657 34 ENSG00000259064.2 RP11-386M24.5 chr15 92627073 92627414 + processed_pseudogene KNOWN OTTHUMG00000171745.2 342 342 1 ENSG00000275965.1 RP11-386M24.10 chr15 92634305 92634665 + antisense NOVEL OTTHUMG00000187013.1 361 361 1 ENSG00000272298.1 RP11-386M24.8 chr15 92699040 92724277 - processed_transcript NOVEL OTTHUMG00000185772.1 25238 240 2 ENSG00000198700.8 IPO9 chr1 201829141 201884294 + protein_coding KNOWN OTTHUMG00000035805.1 55154 11915 39 ENSG00000253954.3 HMGN1P38 chr15 92711808 92712110 + processed_pseudogene KNOWN OTTHUMG00000163610.2 303 303 1 ENSG00000258741.3 RP11-386M24.4 chr15 92715710 92734195 - transcribed_processed_pseudogene KNOWN OTTHUMG00000171746.3 18486 790 4 ENSG00000240484.1 RP11-386M24.1 chr15 92719393 92719740 + processed_pseudogene KNOWN OTTHUMG00000158063.1 348 348 1 ENSG00000258562.2 CTD-2313J17.3 chr15 92762757 92763750 + processed_pseudogene KNOWN OTTHUMG00000171747.2 994 526 2 ENSG00000260361.1 CTD-2313J17.5 chr15 92779757 92781492 - sense_intronic NOVEL OTTHUMG00000173063.1 1736 1736 1 ENSG00000258527.1 ASB9P1 chr15 92795647 92796439 + processed_pseudogene KNOWN OTTHUMG00000171749.1 793 793 1 ENSG00000258922.1 CTD-2313J17.1 chr15 92805770 92808567 - sense_intronic NOVEL OTTHUMG00000171750.1 2798 464 2 ENSG00000274215.1 CTD-2313J17.6 chr15 92808451 92809057 + lincRNA NOVEL OTTHUMG00000187014.1 607 607 1 ENSG00000275175.1 CTD-2313J17.7 chr15 92819598 92819992 + lincRNA NOVEL OTTHUMG00000187015.1 395 395 1 ENSG00000272888.4 LINC01578 chr15 92882707 92899701 + processed_transcript NOVEL OTTHUMG00000149845.9 16995 5395 34 ENSG00000277681.1 MIR6739 chr1 201863373 201863447 + miRNA KNOWN NA 75 75 1 ENSG00000279765.2 RP11-437B10.1 chr15 92883413 92949230 + protein_coding NOVEL OTTHUMG00000189505.2 65818 4734 19 ENSG00000173575.17 CHD2 chr15 92900189 93028005 + protein_coding KNOWN OTTHUMG00000185958.7 127817 15723 177 ENSG00000264173.1 MIR3175 chr15 92904399 92904475 + miRNA KNOWN NA 77 77 1 ENSG00000182175.12 RGMA chr15 93035273 93089204 - protein_coding KNOWN OTTHUMG00000171781.5 53932 13141 40 ENSG00000258611.2 RP11-368J22.2 chr15 93065586 93066606 - transcribed_processed_pseudogene KNOWN OTTHUMG00000171782.2 1021 1021 1 ENSG00000280076.1 RP11-326A13.2 chr15 93206066 93208048 + TEC KNOWN OTTHUMG00000171783.1 1983 1983 1 ENSG00000258888.1 RP11-326A13.1 chr15 93257198 93260475 + lincRNA NOVEL OTTHUMG00000171784.1 3278 682 2 ENSG00000212063.1 AC112693.1 chr15 93286235 93286323 - miRNA NOVEL NA 89 89 1 ENSG00000258971.1 RP11-326A13.3 chr15 93301416 93301647 - processed_pseudogene KNOWN OTTHUMG00000171792.1 232 232 1 ENSG00000257060.5 RP11-266O8.1 chr15 93312557 93569483 + lincRNA NOVEL OTTHUMG00000171785.3 256927 3677 19 ENSG00000198892.6 SHISA4 chr1 201888680 201892306 + protein_coding KNOWN OTTHUMG00000035807.1 3627 1746 12 ENSG00000258909.1 RP11-164C12.2 chr15 93416850 93422576 - lincRNA NOVEL OTTHUMG00000171793.1 5727 2284 2 ENSG00000258787.1 RP11-164C12.1 chr15 93430659 93431217 - processed_pseudogene KNOWN OTTHUMG00000171794.1 559 559 1 ENSG00000258631.2 RP11-739G5.1 chr15 93589867 93760799 + lincRNA NOVEL OTTHUMG00000171795.2 170933 457 4 ENSG00000258754.6 LINC01579 chr15 93718542 94070820 - lincRNA NOVEL OTTHUMG00000171808.3 352279 6795 33 ENSG00000258627.1 RP11-76E17.1 chr15 93825058 93825159 - transcribed_processed_pseudogene KNOWN OTTHUMG00000171797.1 102 102 1 ENSG00000259123.1 RP11-76E17.2 chr15 93837611 93852981 - lincRNA NOVEL OTTHUMG00000171798.1 15371 442 2 ENSG00000258476.4 RP11-76E17.3 chr15 93863109 93878356 + lincRNA NOVEL OTTHUMG00000171799.1 15248 1572 9 ENSG00000258831.1 RP11-76E17.4 chr15 93882082 93886743 + lincRNA NOVEL OTTHUMG00000171800.1 4662 915 3 ENSG00000222409.1 AC103996.1 chr15 93896912 93897027 - miRNA NOVEL NA 116 116 1 ENSG00000258785.4 LINC01580 chr15 93900701 93984150 + lincRNA NOVEL OTTHUMG00000171810.1 83450 1026 7 ENSG00000223774.4 RP11-307B6.3 chr1 201893842 201899978 + antisense NOVEL OTTHUMG00000035808.1 6137 671 6 ENSG00000259724.1 LINC01581 chr15 93905405 94107938 - lincRNA NOVEL OTTHUMG00000172625.1 202534 3267 11 ENSG00000258895.1 CTD-2643K12.1 chr15 94033658 94034177 + processed_pseudogene KNOWN OTTHUMG00000171811.1 520 520 1 ENSG00000212022.1 AC080032.1 chr15 94081098 94081191 - miRNA NOVEL NA 94 94 1 ENSG00000258570.1 RP11-452K20.1 chr15 94168349 94168751 + processed_pseudogene KNOWN OTTHUMG00000171812.1 403 403 1 ENSG00000140563.13 MCTP2 chr15 94231538 94483952 + protein_coding KNOWN OTTHUMG00000171751.7 252415 12978 103 ENSG00000258632.2 RP11-354B3.1 chr15 94273496 94274005 + processed_pseudogene KNOWN OTTHUMG00000171779.3 510 435 2 ENSG00000259331.1 RP11-57P19.1 chr15 94600014 94600821 + lincRNA NOVEL OTTHUMG00000172481.1 808 648 2 ENSG00000277654.3 RP11-255M2.3 chr15 94841059 95169864 + lincRNA NOVEL OTTHUMG00000187026.1 328806 2453 31 ENSG00000260521.2 CTD-2576F9.1 chr15 94855474 94856914 + processed_pseudogene KNOWN OTTHUMG00000171780.2 1441 1441 1 ENSG00000270017.1 CTD-2576F9.2 chr15 94855586 94857011 - lincRNA NOVEL OTTHUMG00000183894.1 1426 475 2 ENSG00000279195.1 PRAMEF11 chr1 12824942 12828663 - protein_coding KNOWN NA 3722 1311 3 ENSG00000163431.12 LMOD1 chr1 201896452 201946588 - protein_coding KNOWN OTTHUMG00000035802.2 50137 3971 7 ENSG00000258433.1 RP11-255M2.1 chr15 95034384 95035737 - lincRNA NOVEL OTTHUMG00000171816.1 1354 715 2 ENSG00000258773.1 RP11-255M2.2 chr15 95080095 95132859 - lincRNA NOVEL OTTHUMG00000171817.1 52765 573 3 ENSG00000248441.5 LINC01197 chr15 95209099 95327129 - lincRNA NOVEL OTTHUMG00000171818.2 118031 6992 18 ENSG00000273923.1 CTD-2536I1.3 chr15 95225326 95225864 - lincRNA NOVEL OTTHUMG00000187019.1 539 539 1 ENSG00000280304.1 CTD-2536I1.2 chr15 95280753 95284249 - TEC KNOWN OTTHUMG00000177231.1 3497 3497 1 ENSG00000259134.4 LINC00924 chr15 95433095 95507847 + lincRNA NOVEL OTTHUMG00000171819.1 74753 2682 13 ENSG00000258489.3 RP11-398J10.2 chr15 95463592 95493770 - lincRNA NOVEL OTTHUMG00000171820.2 30179 1057 4 ENSG00000275016.3 RP11-61O11.1 chr15 95638346 95825451 + lincRNA NOVEL OTTHUMG00000187027.1 187106 1382 15 ENSG00000222076.1 RNU2-3P chr15 95745804 95745994 + snRNA KNOWN NA 191 191 1 ENSG00000275443.1 RP11-759A24.3 chr15 95990582 96300990 + lincRNA NOVEL OTTHUMG00000187031.1 310409 751 4 ENSG00000278750.1 AC099676.1 chr1 201921644 201921736 - miRNA NOVEL NA 93 93 1 ENSG00000259348.1 RP11-4G2.1 chr15 96028089 96046930 - lincRNA NOVEL OTTHUMG00000171836.1 18842 561 2 ENSG00000259702.1 RP11-236L14.1 chr15 96049275 96064426 - lincRNA NOVEL OTTHUMG00000171837.1 15152 571 2 ENSG00000273771.1 RP11-236L14.2 chr15 96080713 96084584 - lincRNA NOVEL OTTHUMG00000187028.1 3872 2797 2 ENSG00000247809.6 NR2F2-AS1 chr15 96110040 96327361 - antisense NOVEL OTTHUMG00000171855.5 217322 6063 64 ENSG00000280048.1 RP11-327J17.7 chr15 96112628 96116051 - TEC KNOWN OTTHUMG00000172931.1 3424 3424 1 ENSG00000277135.1 RP11-327J17.9 chr15 96139472 96140452 - lincRNA NOVEL OTTHUMG00000187032.1 981 981 1 ENSG00000259359.1 RP11-327J17.2 chr15 96171581 96174339 + lincRNA NOVEL OTTHUMG00000171853.1 2759 751 5 ENSG00000278146.1 RP11-327J17.8 chr15 96230897 96231145 + lincRNA NOVEL OTTHUMG00000187029.1 249 249 1 ENSG00000259763.1 RP11-327J17.1 chr15 96235785 96236703 + lincRNA NOVEL OTTHUMG00000171854.1 919 447 2 ENSG00000279645.1 RP11-759A24.1 chr15 96285068 96289265 - TEC KNOWN OTTHUMG00000177232.1 4198 4198 1 ENSG00000134375.9 TIMM17A chr1 201955491 201970661 + protein_coding KNOWN OTTHUMG00000035806.1 15171 3513 19 ENSG00000280291.1 RP11-759A24.2 chr15 96294935 96298023 - TEC KNOWN OTTHUMG00000177233.1 3089 3089 1 ENSG00000185551.11 NR2F2 chr15 96325938 96340263 + protein_coding KNOWN OTTHUMG00000149848.4 14326 6459 14 ENSG00000222651.1 MIR1469 chr15 96333261 96333307 + miRNA KNOWN NA 47 47 1 ENSG00000275322.1 RP11-262A16.1 chr15 96342953 96345651 + lincRNA NOVEL OTTHUMG00000187030.1 2699 1133 2 ENSG00000259275.2 RP11-522B15.3 chr15 96354237 96403803 + lincRNA NOVEL OTTHUMG00000171847.2 49567 5303 4 ENSG00000259614.2 RP11-522B15.6 chr15 96388214 96389056 - processed_pseudogene KNOWN OTTHUMG00000171856.2 843 843 1 ENSG00000259542.4 RP11-522B15.4 chr15 96393146 96405189 - lincRNA NOVEL OTTHUMG00000171848.1 12044 812 9 ENSG00000259312.1 RP11-522B15.5 chr15 96438570 96444266 + lincRNA NOVEL OTTHUMG00000171857.1 5697 552 2 ENSG00000250825.1 PGAM1P12 chr15 96441566 96442313 - processed_pseudogene KNOWN OTTHUMG00000160134.1 748 748 1 ENSG00000242295.1 RP11-522B15.1 chr15 96448154 96448493 + processed_pseudogene KNOWN OTTHUMG00000158067.1 340 340 1 ENSG00000206637.1 SNORA70 chr1 201978461 201978595 + snoRNA NOVEL NA 135 135 1 ENSG00000259534.1 RP11-522B15.7 chr15 96448842 96449749 + lincRNA NOVEL OTTHUMG00000171858.1 908 542 2 ENSG00000222617.1 RN7SKP254 chr15 96486582 96486891 + misc_RNA KNOWN NA 310 310 1 ENSG00000274079.1 Metazoa_SRP chr15 96496180 96496462 - misc_RNA NOVEL NA 283 283 1 ENSG00000259340.2 CTD-2027G2.1 chr15 96551381 96551517 + processed_pseudogene KNOWN OTTHUMG00000171859.2 137 137 1 ENSG00000214424.5 FAM149B1P1 chr15 96756987 96758596 + processed_pseudogene KNOWN OTTHUMG00000165496.2 1610 1610 1 ENSG00000259282.4 SPATA8-AS1 chr15 96772005 96783312 - antisense NOVEL OTTHUMG00000172033.1 11308 627 7 ENSG00000185594.4 SPATA8 chr15 96783389 96785615 + protein_coding KNOWN OTTHUMG00000149847.2 2227 1491 11 ENSG00000223120.1 RN7SKP181 chr15 96842069 96842384 + misc_RNA KNOWN NA 316 316 1 ENSG00000215948.1 AC055873.1 chr15 97091262 97091352 - miRNA NOVEL NA 91 91 1 ENSG00000259403.1 RP11-315L6.1 chr15 97272177 97319288 - lincRNA NOVEL OTTHUMG00000172034.1 47112 454 3 ENSG00000238003.1 RP11-465N4.2 chr1 201978642 201978949 + processed_pseudogene KNOWN OTTHUMG00000035803.1 308 308 1 ENSG00000259485.1 CTD-2147F2.1 chr15 97295881 97432094 + lincRNA NOVEL OTTHUMG00000172035.1 136214 989 6 ENSG00000242863.3 RN7SL677P chr15 97353497 97353815 + misc_RNA KNOWN NA 319 319 1 ENSG00000259664.2 CTD-2147F2.2 chr15 97370371 97521811 - lincRNA NOVEL OTTHUMG00000172036.2 151441 1726 5 ENSG00000251729.1 RNA5SP401 chr15 97472126 97472252 - rRNA KNOWN NA 127 127 1 ENSG00000279091.1 RP11-461F11.2 chr15 97533738 97541476 - TEC KNOWN OTTHUMG00000172042.1 7739 7739 1 ENSG00000259582.3 RP11-461F11.3 chr15 97540597 97560702 - lincRNA NOVEL OTTHUMG00000172043.3 20106 1780 7 ENSG00000251209.6 LINC00923 chr15 97572185 97874550 - lincRNA KNOWN OTTHUMG00000172044.2 302366 4649 28 ENSG00000259870.1 RP11-753A21.2 chr15 97876289 97878386 + lincRNA NOVEL OTTHUMG00000172742.2 2098 2098 1 ENSG00000215983.2 AC024651.1 chr15 97895114 97895200 - miRNA NOVEL NA 87 87 1 ENSG00000140450.8 ARRDC4 chr15 97960698 97973838 + protein_coding KNOWN OTTHUMG00000149849.1 13141 4072 8 ENSG00000176393.9 RNPEP chr1 201982372 202006147 + protein_coding KNOWN OTTHUMG00000035866.3 23776 3479 89 ENSG00000259478.2 RP11-753A21.1 chr15 97982509 97991142 - lincRNA NOVEL OTTHUMG00000172045.1 8634 1963 4 ENSG00000258483.2 AC144835.1 chr15 98003081 98021777 + lincRNA NOVEL OTTHUMG00000171822.2 18697 1224 5 ENSG00000259199.1 CTD-2544M6.1 chr15 98046667 98293177 - lincRNA NOVEL OTTHUMG00000171865.1 246511 364 4 ENSG00000222361.1 RNU6-1186P chr15 98074667 98074763 - snRNA KNOWN NA 97 97 1 ENSG00000259611.1 LINC01582 chr15 98085627 98103712 - lincRNA NOVEL OTTHUMG00000171877.1 18086 930 4 ENSG00000259266.1 RP11-183E24.1 chr15 98118171 98118320 + processed_pseudogene KNOWN OTTHUMG00000171860.1 150 150 1 ENSG00000259320.1 RP11-183E24.2 chr15 98122563 98131607 - lincRNA NOVEL OTTHUMG00000171878.1 9045 410 2 ENSG00000259041.1 RP11-167B3.1 chr15 98282075 98285907 + lincRNA NOVEL OTTHUMG00000171823.1 3833 385 3 ENSG00000274312.1 RP11-167B3.2 chr15 98319687 98320237 - lincRNA NOVEL OTTHUMG00000187037.1 551 551 1 ENSG00000277987.1 RP11-167B3.3 chr15 98324273 98327494 - lincRNA NOVEL OTTHUMG00000187038.1 3222 289 2 ENSG00000273478.1 RP11-465N4.5 chr1 201995696 201996352 - antisense NOVEL OTTHUMG00000186493.1 657 657 1 ENSG00000185087.10 FAM169B chr15 98437162 98514382 - protein_coding KNOWN OTTHUMG00000171863.1 77221 3301 11 ENSG00000259507.1 RP11-719C20.1 chr15 98466840 98467412 + processed_pseudogene KNOWN OTTHUMG00000171861.2 573 573 1 ENSG00000259424.1 RP11-35O15.1 chr15 98646951 98647371 - antisense NOVEL OTTHUMG00000171862.1 421 334 2 ENSG00000140443.12 IGF1R chr15 98648971 98964530 + protein_coding KNOWN OTTHUMG00000149851.6 315560 13509 98 ENSG00000278022.1 RP11-35O15.2 chr15 98660210 98660668 + sense_intronic NOVEL OTTHUMG00000187039.1 459 459 1 ENSG00000264480.1 MIR4714 chr15 98784426 98784502 + miRNA KNOWN NA 77 77 1 ENSG00000259621.1 RP11-654A16.1 chr15 98880659 98893535 - antisense NOVEL OTTHUMG00000171879.1 12877 263 2 ENSG00000259475.1 RP11-654A16.3 chr15 98954149 99105824 - antisense NOVEL OTTHUMG00000171895.1 151676 588 4 ENSG00000183571.9 PGPEP1L chr15 98968230 99007795 - protein_coding KNOWN OTTHUMG00000171896.1 39566 1576 10 ENSG00000278090.1 RP11-6O2.2 chr15 99028538 99031053 + lincRNA NOVEL OTTHUMG00000173033.1 2516 2516 1 ENSG00000234678.1 RP11-465N4.4 chr1 202000094 202010353 - antisense NOVEL OTTHUMG00000035865.1 10260 1061 4 ENSG00000182253.13 SYNM chr15 99098217 99135593 + protein_coding KNOWN OTTHUMG00000171887.5 37377 7819 18 ENSG00000261054.1 RP11-6O2.4 chr15 99128832 99131806 - antisense NOVEL OTTHUMG00000177237.1 2975 2562 2 ENSG00000103852.11 TTC23 chr15 99136323 99251223 - protein_coding KNOWN OTTHUMG00000147344.9 114901 6148 128 ENSG00000261616.1 RP11-6O2.3 chr15 99139317 99145370 + antisense NOVEL OTTHUMG00000177238.1 6054 2677 2 ENSG00000259921.1 AC022819.3 chr15 99157231 99161140 - sense_intronic NOVEL OTTHUMG00000177239.1 3910 3910 1 ENSG00000168904.13 LRRC28 chr15 99251362 99390729 + protein_coding KNOWN OTTHUMG00000149854.9 139368 9279 115 ENSG00000264771.1 AC022819.1 chr15 99257539 99257670 + miRNA NOVEL NA 132 132 1 ENSG00000259706.1 HSP90B2P chr15 99257632 99260015 + processed_pseudogene KNOWN OTTHUMG00000171904.2 2384 2384 1 ENSG00000259228.1 HNRNPA1P62 chr15 99284625 99285576 - processed_pseudogene KNOWN OTTHUMG00000171905.3 952 952 1 ENSG00000281635.1 AC022819.2 chr15 99319095 99319623 - protein_coding NOVEL NA 529 81 3 ENSG00000275207.1 MIR6740 chr1 202003124 202003236 + miRNA KNOWN NA 113 113 1 ENSG00000259257.1 RP11-616M17.1 chr15 99337857 99338481 + processed_pseudogene KNOWN OTTHUMG00000171907.2 625 625 1 ENSG00000259590.1 RP11-20G13.3 chr15 99395179 99396593 - lincRNA NOVEL OTTHUMG00000171948.1 1415 323 2 ENSG00000259760.1 RP11-20G13.2 chr15 99396613 99401315 - antisense NOVEL OTTHUMG00000171949.1 4703 198 2 ENSG00000274294.1 RP11-20G13.5 chr15 99416584 99417204 + lincRNA NOVEL OTTHUMG00000187040.1 621 621 1 ENSG00000259341.1 RP11-20G13.1 chr15 99427009 99431028 - lincRNA NOVEL OTTHUMG00000171950.1 4020 395 2 ENSG00000279846.1 RP11-20G13.4 chr15 99497812 99498375 - TEC KNOWN OTTHUMG00000177240.1 564 564 1 ENSG00000241562.2 RPL7P5 chr15 99551382 99552117 - processed_pseudogene KNOWN OTTHUMG00000158070.2 736 736 1 ENSG00000068305.16 MEF2A chr15 99565417 99716466 + protein_coding KNOWN OTTHUMG00000171937.2 151050 6925 92 ENSG00000201724.1 Y_RNA chr15 99681786 99681877 - misc_RNA NOVEL NA 92 92 1 ENSG00000183060.14 LYSMD4 chr15 99715697 99733561 - protein_coding KNOWN OTTHUMG00000149853.4 17865 5697 36 ENSG00000163435.14 ELF3 chr1 202007945 202017188 + protein_coding KNOWN OTTHUMG00000035867.3 9244 7191 50 ENSG00000221691.1 AC090825.2 chr15 99751719 99751805 + miRNA NOVEL NA 87 87 1 ENSG00000182397.13 DNM1P46 chr15 99790156 99806927 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000149852.2 16772 3979 19 ENSG00000259655.1 CTD-2054N24.1 chr15 99791127 99792847 + unprocessed_pseudogene KNOWN OTTHUMG00000172117.1 1721 739 4 ENSG00000241588.3 RN7SL484P chr15 99791209 99791410 + misc_RNA KNOWN NA 202 202 1 ENSG00000221511.1 AC090825.1 chr15 99792297 99792379 + miRNA NOVEL NA 83 83 1 ENSG00000259363.4 CTD-2054N24.2 chr15 99807023 99877148 + lincRNA NOVEL OTTHUMG00000172118.3 70126 1291 12 ENSG00000254744.3 CTD-3076O17.1 chr15 99970215 99974010 + antisense NOVEL OTTHUMG00000165445.4 3796 572 3 ENSG00000140470.12 ADAMTS17 chr15 99971589 100342005 - protein_coding KNOWN OTTHUMG00000149867.6 370417 8242 61 ENSG00000259219.1 CTD-3076O17.2 chr15 99976481 99980774 + antisense NOVEL OTTHUMG00000172261.1 4294 2393 2 ENSG00000252957.1 RNA5SP402 chr15 100074081 100074190 - rRNA KNOWN NA 110 110 1 ENSG00000231103.2 RP5-845O24.3 chr1 12838125 12841357 - unprocessed_pseudogene KNOWN OTTHUMG00000001930.3 3233 1417 4 ENSG00000249007.1 RP11-510N19.5 chr1 202011370 202015657 + sense_intronic NOVEL OTTHUMG00000040657.1 4288 987 2 ENSG00000259356.1 RP11-90E5.1 chr15 100126106 100129743 + antisense NOVEL OTTHUMG00000172262.1 3638 1781 2 ENSG00000189419.6 SPATA41 chr15 100344457 100349655 - lincRNA NOVEL OTTHUMG00000172281.2 5199 2093 4 ENSG00000259430.1 CERS3-AS1 chr15 100372939 100437914 + antisense NOVEL OTTHUMG00000172308.1 64976 661 7 ENSG00000154227.12 CERS3 chr15 100400395 100544995 - protein_coding KNOWN OTTHUMG00000172568.5 144601 5130 60 ENSG00000270127.2 RP11-526I2.5 chr15 100547765 100550153 - lincRNA NOVEL OTTHUMG00000177241.2 2389 2389 1 ENSG00000251819.1 RNU6-322P chr15 100551820 100551922 - snRNA KNOWN NA 103 103 1 ENSG00000259205.2 PRKXP1 chr15 100553529 100558954 - processed_pseudogene KNOWN OTTHUMG00000172351.2 5426 1122 2 ENSG00000259540.1 RP11-526I2.1 chr15 100558677 100559798 + antisense NOVEL OTTHUMG00000172350.2 1122 632 5 ENSG00000140471.15 LINS chr15 100559369 100603230 - protein_coding KNOWN OTTHUMG00000149865.11 43862 7790 58 ENSG00000200095.1 RNU6-181P chr15 100560686 100560792 - snRNA KNOWN NA 107 107 1 ENSG00000232296.1 RP11-510N19.2 chr1 202028606 202028692 + processed_pseudogene KNOWN OTTHUMG00000035925.1 87 87 1 ENSG00000183475.11 ASB7 chr15 100602534 100651705 + protein_coding KNOWN OTTHUMG00000149868.3 49172 5397 18 ENSG00000212306.1 Y_RNA chr15 100638363 100638457 + misc_RNA NOVEL NA 95 95 1 ENSG00000259381.2 RP11-192M23.1 chr15 100645434 100646655 - processed_pseudogene KNOWN OTTHUMG00000172373.2 1222 1222 1 ENSG00000259579.1 RP11-66B24.5 chr15 100716249 100828497 + lincRNA NOVEL OTTHUMG00000172376.1 112249 643 3 ENSG00000279588.1 AC087762.1 chr15 100783470 100785235 - protein_coding KNOWN NA 1766 1766 1 ENSG00000259586.1 RP11-66B24.3 chr15 100846604 100846767 - processed_pseudogene KNOWN OTTHUMG00000172066.1 164 164 1 ENSG00000232386.8 RP11-66B24.2 chr15 100849561 100861756 + lincRNA NOVEL OTTHUMG00000186438.2 12196 1479 18 ENSG00000272808.2 RP11-66B24.7 chr15 100849831 100865457 + processed_transcript NOVEL OTTHUMG00000172065.2 15627 5068 6 ENSG00000259604.4 RP11-66B24.1 chr15 100861843 100874369 + lincRNA NOVEL OTTHUMG00000172058.2 12527 1183 9 ENSG00000272639.1 RP11-66B24.8 chr15 100861924 100885329 + processed_transcript NOVEL OTTHUMG00000149870.4 23406 564 3 ENSG00000235811.1 RP11-510N19.3 chr1 202039851 202039934 + processed_pseudogene KNOWN OTTHUMG00000035926.1 84 84 1 ENSG00000184254.15 ALDH1A3 chr15 100877714 100916626 + protein_coding KNOWN OTTHUMG00000186439.2 38913 5772 43 ENSG00000278456.1 RP11-66B24.9 chr15 100888472 100889106 - antisense NOVEL OTTHUMG00000187041.1 635 635 1 ENSG00000259583.2 RP11-66B24.4 chr15 100892859 100919283 - antisense NOVEL OTTHUMG00000172067.2 26425 6792 7 ENSG00000154237.11 LRRK1 chr15 100919215 101078254 + protein_coding KNOWN OTTHUMG00000165514.4 159040 17600 136 ENSG00000259376.1 RP11-505E24.3 chr15 101043716 101049456 - antisense NOVEL OTTHUMG00000172068.1 5741 491 2 ENSG00000259755.1 RP11-505E24.2 chr15 101050732 101086066 - antisense NOVEL OTTHUMG00000172069.1 35335 720 3 ENSG00000259365.1 RP11-424I19.1 chr15 101116603 101117546 + lincRNA NOVEL OTTHUMG00000172090.1 944 556 2 ENSG00000259182.4 RP11-424I19.2 chr15 101168530 101170821 + lincRNA NOVEL OTTHUMG00000172091.1 2292 762 4 ENSG00000131873.5 CHSY1 chr15 101175723 101251932 - protein_coding KNOWN OTTHUMG00000149873.2 76210 5555 14 ENSG00000131871.13 VIMP chr15 101270817 101277500 - protein_coding KNOWN OTTHUMG00000166441.4 6684 3766 39 ENSG00000212512.2 Y_RNA chr1 202070841 202070943 + misc_RNA NOVEL NA 103 103 1 ENSG00000131876.15 SNRPA1 chr15 101281510 101295282 - protein_coding KNOWN OTTHUMG00000149871.2 13773 3669 87 ENSG00000259172.1 RP11-299G20.2 chr15 101295419 101305737 + antisense NOVEL OTTHUMG00000172092.1 10319 2590 2 ENSG00000140479.15 PCSK6 chr15 101297142 101525202 - protein_coding KNOWN OTTHUMG00000172097.9 228061 13175 190 ENSG00000279970.1 RP11-299G20.5 chr15 101299656 101301648 - TEC KNOWN OTTHUMG00000177245.1 1993 1993 1 ENSG00000259764.1 PCSK6-AS1 chr15 101334437 101337428 + antisense NOVEL OTTHUMG00000172093.1 2992 639 3 ENSG00000274139.1 RP11-14C10.3 chr15 101495052 101495567 - sense_intronic NOVEL OTTHUMG00000187042.2 516 516 1 ENSG00000277210.2 RP11-14C10.4 chr15 101522597 101528349 - lincRNA NOVEL OTTHUMG00000187043.3 5753 2451 3 ENSG00000259464.2 SNRPCP18 chr15 101562536 101562974 + processed_pseudogene KNOWN OTTHUMG00000171903.2 439 439 1 ENSG00000259695.2 RP11-14C10.2 chr15 101580893 101581556 - processed_pseudogene KNOWN OTTHUMG00000171906.2 664 664 1 ENSG00000273585.1 RP11-14C10.5 chr15 101613676 101614339 - lincRNA NOVEL OTTHUMG00000187044.1 664 489 2 ENSG00000227109.1 CRIP1P3 chr1 202096759 202096978 + processed_pseudogene KNOWN OTTHUMG00000035927.1 220 220 1 ENSG00000184277.11 TM2D3 chr15 101621444 101652391 - protein_coding KNOWN OTTHUMG00000149872.4 30948 11894 60 ENSG00000252614.1 RNU6-807P chr15 101648206 101648312 - snRNA KNOWN NA 107 107 1 ENSG00000185418.14 TARSL2 chr15 101653598 101724604 - protein_coding KNOWN OTTHUMG00000149869.5 71007 4584 80 ENSG00000259658.3 RP11-89K11.1 chr15 101737099 101745710 - lincRNA NOVEL OTTHUMG00000172150.2 8612 711 5 ENSG00000259660.2 DNM1P47 chr15 101751032 101794302 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000172265.2 43271 15281 9 ENSG00000259236.1 GOLGA8VP chr15 101771758 101781989 - unprocessed_pseudogene KNOWN OTTHUMG00000172266.1 10232 1798 15 ENSG00000277814.1 AC107977.2 chr15 101772300 101772381 - miRNA NOVEL NA 82 82 1 ENSG00000240927.3 RN7SL209P chr15 101773238 101773513 - misc_RNA KNOWN NA 276 276 1 ENSG00000274913.1 AC107977.1 chr15 101775463 101775531 - miRNA NOVEL NA 69 69 1 ENSG00000184140.5 OR4F6 chr15 101805699 101806686 + protein_coding KNOWN OTTHUMG00000172267.1 988 988 1 ENSG00000170075.8 GPR37L1 chr1 202122858 202133592 + protein_coding KNOWN OTTHUMG00000035924.2 10735 6588 2 ENSG00000182854.6 OR4F15 chr15 101805720 101819147 + protein_coding KNOWN OTTHUMG00000172268.1 13428 1392 4 ENSG00000232459.1 OR4F14P chr15 101828741 101829679 + unprocessed_pseudogene KNOWN OTTHUMG00000154261.1 939 939 1 ENSG00000214344.4 OR4F13P chr15 101842119 101850324 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000154399.2 8206 2054 6 ENSG00000257109.3 OR4F28P chr15 101875964 101876901 + unprocessed_pseudogene KNOWN OTTHUMG00000172269.1 938 938 1 ENSG00000259454.1 WBP1LP5 chr15 101887354 101887767 - processed_pseudogene KNOWN OTTHUMG00000172270.1 414 414 1 ENSG00000259646.1 AC140725.7 chr15 101903154 101903204 + unprocessed_pseudogene KNOWN OTTHUMG00000172271.1 51 51 1 ENSG00000177693.3 OR4F4 chr15 101922042 101923095 - protein_coding KNOWN OTTHUMG00000172272.1 1054 1054 1 ENSG00000183909.5 OR4G2P chr15 101926805 101927707 - unprocessed_pseudogene KNOWN OTTHUMG00000154249.1 903 903 1 ENSG00000275771.1 AC140725.8 chr15 101937591 101938470 - processed_pseudogene KNOWN OTTHUMG00000187876.1 880 880 1 ENSG00000248893.3 FAM138E chr15 101954885 101956412 + lincRNA KNOWN OTTHUMG00000172273.2 1528 1219 5 ENSG00000143862.6 ARL8A chr1 202133404 202144743 - protein_coding KNOWN OTTHUMG00000035923.1 11340 1975 19 ENSG00000259553.3 AC140725.4 chr15 101959848 101961408 - lincRNA NOVEL OTTHUMG00000172274.1 1561 909 5 ENSG00000275690.1 MIR1302-10 chr15 101960459 101960596 - miRNA KNOWN NA 138 138 1 ENSG00000185596.15 WASH3P chr15 101961603 101976543 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000172275.2 14941 2351 53 ENSG00000275449.1 MIR6859-1 chr15 101973524 101973591 + miRNA KNOWN NA 68 68 1 ENSG00000248472.7 DDX11L9 chr15 101976558 101979093 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000172276.1 2536 1740 11 ENSG00000233614.6 DDX11L10 chr16 11555 14090 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000086927.2 2536 1723 8 ENSG00000234769.7 WASH4P chr16 14381 18068 - unprocessed_pseudogene KNOWN OTTHUMG00000059914.6 3688 1246 9 ENSG00000278739.1 MIR6859-4 chr16 17052 17119 - miRNA KNOWN NA 68 68 1 ENSG00000260803.1 Z84812.4 chr16 17514 35195 - processed_transcript NOVEL OTTHUMG00000172805.1 17682 773 4 ENSG00000231439.4 WASIR2 chr16 22910 25123 + lincRNA NOVEL OTTHUMG00000060721.2 2214 1054 2 ENSG00000143851.14 PTPN7 chr1 202147013 202161588 - protein_coding KNOWN OTTHUMG00000035931.6 14576 5906 123 ENSG00000226942.2 IL9RP3 chr16 29336 38321 - unprocessed_pseudogene KNOWN OTTHUMG00000060718.1 8986 1674 9 ENSG00000161980.5 POLR3K chr16 46407 53628 - protein_coding KNOWN OTTHUMG00000060722.3 7222 1889 5 ENSG00000281807.1 Metazoa_SRP chr16 47735 48007 + misc_RNA NOVEL NA 273 273 1 ENSG00000161981.9 SNRNP25 chr16 53010 57669 + protein_coding KNOWN OTTHUMG00000060720.8 4660 3060 30 ENSG00000007384.14 RHBDF1 chr16 58059 76355 - protein_coding KNOWN OTTHUMG00000060719.14 18297 4914 68 ENSG00000278995.1 Z69720.3 chr16 74683 74961 + TEC KNOWN OTTHUMG00000186629.1 279 279 1 ENSG00000103152.10 MPG chr16 77007 85853 + protein_coding KNOWN OTTHUMG00000047887.5 8847 1661 19 ENSG00000103148.14 NPRL3 chr16 84271 138860 - protein_coding KNOWN OTTHUMG00000047792.18 54590 6609 119 ENSG00000269482.1 Z69720.2 chr16 90631 91102 + antisense NOVEL OTTHUMG00000183022.1 472 472 1 ENSG00000228779.1 Z69666.2 chr16 125737 127219 + antisense NOVEL OTTHUMG00000060826.1 1483 801 2 ENSG00000243323.4 PTPRVP chr1 202168051 202189455 + unitary_pseudogene KNOWN OTTHUMG00000040524.2 21405 6596 57 ENSG00000130656.4 HBZ chr16 152687 154503 + protein_coding KNOWN OTTHUMG00000059928.1 1817 755 3 ENSG00000206177.5 HBM chr16 153892 166768 + protein_coding KNOWN OTTHUMG00000059926.1 12877 916 9 ENSG00000206178.2 HBZP1 chr16 163122 165156 + unprocessed_pseudogene KNOWN OTTHUMG00000059925.1 2035 429 3 ENSG00000225323.1 Z84721.4 chr16 168679 169334 + unprocessed_pseudogene KNOWN OTTHUMG00000059927.1 656 372 3 ENSG00000188536.11 HBA2 chr16 172847 173710 + protein_coding KNOWN OTTHUMG00000059924.2 864 856 10 ENSG00000206172.7 HBA1 chr16 176680 177522 + protein_coding KNOWN OTTHUMG00000060138.3 843 835 10 ENSG00000207243.1 Y_RNA chr16 178554 178656 + misc_RNA NOVEL NA 103 103 1 ENSG00000086506.2 HBQ1 chr16 180453 181181 + protein_coding KNOWN OTTHUMG00000060727.1 729 536 3 ENSG00000268836.1 LA16c-OS12.2 chr16 185748 186294 - lincRNA NOVEL OTTHUMG00000183023.1 547 547 1 ENSG00000007392.15 LUC7L chr16 188969 229463 - protein_coding KNOWN OTTHUMG00000060730.11 40495 6176 140 ENSG00000133067.16 LGR6 chr1 202193901 202319781 + protein_coding KNOWN OTTHUMG00000041383.8 125881 4583 94 ENSG00000206168.1 Z69890.1 chr16 231134 231472 + processed_pseudogene KNOWN OTTHUMG00000060729.2 339 339 1 ENSG00000167930.14 ITFG3 chr16 234546 268971 + protein_coding KNOWN OTTHUMG00000060728.14 34426 4699 98 ENSG00000269881.1 AC004754.3 chr16 249547 269943 + protein_coding PUTATIVE OTTHUMG00000183024.1 20397 2242 13 ENSG00000076344.14 RGS11 chr16 268301 275980 - protein_coding KNOWN OTTHUMG00000064893.5 7680 4798 97 ENSG00000242173.7 ARHGDIG chr16 268727 283010 + protein_coding KNOWN OTTHUMG00000064892.5 14284 2429 30 ENSG00000185615.14 PDIA2 chr16 283152 287215 + protein_coding KNOWN OTTHUMG00000064891.4 4064 2248 53 ENSG00000103126.13 AXIN1 chr16 287440 352673 - protein_coding KNOWN OTTHUMG00000064930.4 65234 7487 37 ENSG00000086504.14 MRPL28 chr16 367384 370527 - protein_coding KNOWN OTTHUMG00000047994.5 3144 2404 47 ENSG00000129925.9 TMEM8A chr16 370773 387113 - protein_coding KNOWN OTTHUMG00000047996.7 16341 4447 52 ENSG00000236829.8 Z97634.3 chr16 382097 392960 + transcribed_processed_pseudogene KNOWN OTTHUMG00000047997.2 10864 2291 7 ENSG00000179172.8 HNRNPCL1 chr1 12847377 12947578 - protein_coding KNOWN OTTHUMG00000001931.2 100202 1201 4 ENSG00000077152.8 UBE2T chr1 202331657 202341980 - protein_coding KNOWN OTTHUMG00000041392.1 10324 1065 16 ENSG00000103202.11 NME4 chr16 396725 410367 + protein_coding KNOWN OTTHUMG00000047995.8 13643 3670 64 ENSG00000242612.5 DECR2 chr16 401826 412487 + protein_coding KNOWN OTTHUMG00000047846.6 10662 3947 75 ENSG00000276984.1 LA16c-359F1.1 chr16 424243 424543 - lincRNA NOVEL OTTHUMG00000186630.1 301 301 1 ENSG00000090565.14 RAB11FIP3 chr16 425619 523011 + protein_coding KNOWN OTTHUMG00000047843.6 97393 6317 72 ENSG00000201034.1 Y_RNA chr16 439297 439397 - misc_RNA NOVEL NA 101 101 1 ENSG00000230428.1 RP1-196A12.1 chr16 451404 453461 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000132349.1 2058 278 3 ENSG00000277142.1 LINC00235 chr16 525155 527407 - lincRNA KNOWN OTTHUMG00000186631.1 2253 2253 1 ENSG00000103326.9 CAPN15 chr16 527717 554636 + protein_coding KNOWN OTTHUMG00000119059.2 26920 7720 32 ENSG00000266124.1 MIR5587 chr16 535316 535368 + miRNA KNOWN NA 53 53 1 ENSG00000266235.1 MIR3176 chr16 543277 543366 + miRNA KNOWN NA 90 90 1 ENSG00000077157.19 PPP1R12B chr1 202348699 202592706 + protein_coding KNOWN OTTHUMG00000041393.4 244008 20796 125 ENSG00000261691.1 LA16c-366D1.3 chr16 547185 553847 - antisense NOVEL OTTHUMG00000172798.1 6663 476 2 ENSG00000161992.5 PRR35 chr16 560422 565528 + protein_coding KNOWN OTTHUMG00000154104.1 5107 2216 3 ENSG00000007541.13 PIGQ chr16 566995 584136 + protein_coding KNOWN OTTHUMG00000168047.3 17142 6869 87 ENSG00000257108.1 NHLRC4 chr16 566996 569495 + protein_coding KNOWN OTTHUMG00000047857.5 2500 2105 4 ENSG00000197562.8 RAB40C chr16 589357 629272 + protein_coding KNOWN OTTHUMG00000047854.4 39916 4180 69 ENSG00000127578.6 WFIKKN1 chr16 629239 634116 + protein_coding KNOWN OTTHUMG00000090359.3 4878 4878 3 ENSG00000130731.14 C16orf13 chr16 634427 636366 - protein_coding KNOWN OTTHUMG00000047855.3 1940 1830 59 ENSG00000172366.18 FAM195A chr16 636817 648474 + protein_coding KNOWN OTTHUMG00000048042.7 11658 5034 39 ENSG00000102854.13 MSLN chr16 643262 768865 + protein_coding KNOWN OTTHUMG00000047992.4 125604 2642 120 ENSG00000228201.1 AL022341.3 chr16 648473 649200 - antisense NOVEL OTTHUMG00000048041.1 728 389 2 ENSG00000229120.2 CYCSP4 chr1 202369526 202370145 - processed_pseudogene KNOWN OTTHUMG00000041382.2 620 331 2 ENSG00000161996.16 WDR90 chr16 649311 667833 + protein_coding KNOWN OTTHUMG00000048040.4 18523 10534 314 ENSG00000262528.2 LA16c-349E10.1 chr16 654611 656194 - antisense NOVEL OTTHUMG00000177339.2 1584 1417 2 ENSG00000140983.12 RHOT2 chr16 668086 674174 + protein_coding KNOWN OTTHUMG00000121139.5 6089 5174 235 ENSG00000103269.12 RHBDL1 chr16 675666 678268 + protein_coding KNOWN OTTHUMG00000121141.3 2603 1884 28 ENSG00000260394.2 LA16c-313D11.9 chr16 678504 679777 - antisense NOVEL OTTHUMG00000172948.2 1274 1274 5 ENSG00000279441.1 LA16c-313D11.13 chr16 678645 679061 + TEC KNOWN OTTHUMG00000178116.1 417 417 1 ENSG00000103266.9 STUB1 chr16 680224 682870 + protein_coding KNOWN OTTHUMG00000121140.5 2647 2316 54 ENSG00000161999.10 JMJD8 chr16 681671 684528 - protein_coding KNOWN OTTHUMG00000172950.2 2858 2627 100 ENSG00000127580.14 WDR24 chr16 684622 690444 - protein_coding KNOWN OTTHUMG00000090421.2 5823 3570 26 ENSG00000261659.2 LA16c-313D11.12 chr16 689001 692554 + processed_transcript NOVEL OTTHUMG00000172952.2 3554 3554 3 ENSG00000272262.1 U6 chr1 202410108 202410207 - snRNA NOVEL NA 100 100 1 ENSG00000127585.10 FBXL16 chr16 692498 705829 - protein_coding KNOWN OTTHUMG00000090420.3 13332 3989 23 ENSG00000279255.1 LA16c-380A1.2 chr16 707650 709067 + TEC KNOWN OTTHUMG00000186665.1 1418 1418 1 ENSG00000259840.1 LA16c-380A1.1 chr16 710746 711277 - lincRNA NOVEL OTTHUMG00000172953.1 532 446 2 ENSG00000103260.7 METRN chr16 715115 719655 + protein_coding KNOWN OTTHUMG00000047851.5 4541 3692 20 ENSG00000103254.8 FAM173A chr16 720581 722601 + protein_coding KNOWN OTTHUMG00000121177.3 2021 1923 28 ENSG00000162004.15 CCDC78 chr16 722582 726954 - protein_coding KNOWN OTTHUMG00000121176.5 4373 4147 117 ENSG00000103253.16 HAGHL chr16 726936 735525 + protein_coding KNOWN OTTHUMG00000170560.7 8590 4890 84 ENSG00000103245.12 NARFL chr16 729753 741329 - protein_coding KNOWN OTTHUMG00000122093.5 11577 8101 110 ENSG00000279136.1 LA16c-335H7.2 chr16 769119 769443 - TEC KNOWN OTTHUMG00000172814.1 325 325 1 ENSG00000162006.8 MSLNL chr16 769428 783370 - protein_coding KNOWN OTTHUMG00000168780.2 13943 2356 35 ENSG00000232626.3 RP11-175B9.2 chr1 202438396 202439957 + transcribed_processed_pseudogene KNOWN OTTHUMG00000041397.3 1562 1562 2 ENSG00000207579.1 MIR662 chr16 770183 770277 + miRNA KNOWN NA 95 95 1 ENSG00000007376.6 RPUSD1 chr16 784974 788397 - protein_coding KNOWN OTTHUMG00000047840.3 3424 2769 52 ENSG00000127586.15 CHTF18 chr16 788046 800737 + protein_coding KNOWN OTTHUMG00000047838.5 12692 5916 202 ENSG00000127588.4 GNG13 chr16 798041 800733 - protein_coding KNOWN OTTHUMG00000047839.3 2693 984 3 ENSG00000167945.1 PRR25 chr16 805443 813861 + protein_coding KNOWN OTTHUMG00000178117.1 8419 1209 3 ENSG00000275438.1 LA16c-360A4.1 chr16 848525 849065 - lincRNA NOVEL OTTHUMG00000186666.1 541 541 1 ENSG00000103227.17 LMF1 chr16 853634 981318 - protein_coding KNOWN OTTHUMG00000047848.4 127685 8233 100 ENSG00000260022.1 LA16c-306A4.1 chr16 883780 885090 + antisense NOVEL OTTHUMG00000172820.1 1311 530 2 ENSG00000260316.2 LA16c-306A4.2 chr16 898967 905224 - sense_intronic NOVEL OTTHUMG00000172829.2 6258 4728 3 ENSG00000260439.1 LMF1-AS1 chr16 921033 934495 + antisense NOVEL OTTHUMG00000172821.1 13463 1448 5 ENSG00000236439.4 RP11-175B9.3 chr1 202471864 202472117 - processed_pseudogene KNOWN OTTHUMG00000041381.2 254 254 1 ENSG00000276931.1 RP11-161M6.6 chr16 968375 969012 - sense_intronic NOVEL OTTHUMG00000186671.1 638 638 1 ENSG00000260807.5 RP11-161M6.2 chr16 975761 981596 - lincRNA NOVEL OTTHUMG00000172822.2 5836 3905 23 ENSG00000005513.9 SOX8 chr16 981808 986979 + protein_coding KNOWN OTTHUMG00000122101.3 5172 4432 5 ENSG00000260496.3 RP11-161M6.3 chr16 991151 1000926 - lincRNA NOVEL OTTHUMG00000172830.1 9776 1383 10 ENSG00000261713.5 SSTR5-AS1 chr16 1064093 1078731 - processed_transcript NOVEL OTTHUMG00000172831.1 14639 4022 15 ENSG00000261720.1 RP11-161M6.5 chr16 1065240 1066502 + lincRNA NOVEL OTTHUMG00000172832.1 1263 879 2 ENSG00000162009.8 SSTR5 chr16 1078781 1080142 + protein_coding KNOWN OTTHUMG00000047842.5 1362 1362 1 ENSG00000184471.7 C1QTNF8 chr16 1090005 1096244 - protein_coding KNOWN OTTHUMG00000167756.1 6240 1762 13 ENSG00000260702.2 LA16c-349E11.1 chr16 1103280 1105461 - unprocessed_pseudogene KNOWN OTTHUMG00000172990.2 2182 661 3 ENSG00000260532.1 LA16c-381G6.1 chr16 1111627 1113399 + lincRNA NOVEL OTTHUMG00000172991.1 1773 1773 1 ENSG00000253042.1 SNORA70 chr1 202527310 202527427 - snoRNA NOVEL NA 118 118 1 ENSG00000273551.1 RP11-616M22.11 chr16 1148224 1148754 - lincRNA NOVEL OTTHUMG00000186691.1 531 531 1 ENSG00000196557.9 CACNA1H chr16 1153241 1221771 + protein_coding KNOWN OTTHUMG00000172992.2 68531 8484 176 ENSG00000260403.1 RP11-616M22.1 chr16 1156976 1157974 - antisense NOVEL OTTHUMG00000172993.1 999 542 2 ENSG00000259910.1 RP11-616M22.2 chr16 1159548 1160176 - antisense NOVEL OTTHUMG00000172994.1 629 476 2 ENSG00000261294.1 RP11-616M22.3 chr16 1206560 1207124 - antisense NOVEL OTTHUMG00000172995.1 565 338 2 ENSG00000116176.6 TPSG1 chr16 1221651 1225257 - protein_coding KNOWN OTTHUMG00000090466.2 3607 1255 9 ENSG00000277010.1 RP11-616M22.12 chr16 1223639 1224143 + antisense NOVEL OTTHUMG00000186692.1 505 505 1 ENSG00000197253.12 TPSB2 chr16 1227272 1230184 - protein_coding KNOWN OTTHUMG00000155926.4 2913 1738 19 ENSG00000172236.15 TPSAB1 chr16 1240696 1242554 + protein_coding KNOWN OTTHUMG00000090467.3 1859 1512 19 ENSG00000095917.12 TPSD1 chr16 1256059 1258998 + protein_coding KNOWN OTTHUMG00000128511.4 2940 1532 11 ENSG00000143858.10 SYT2 chr1 202590596 202710417 - protein_coding KNOWN OTTHUMG00000041388.1 119822 7774 18 ENSG00000260182.1 RP11-616M22.5 chr16 1257339 1258074 + sense_intronic NOVEL OTTHUMG00000172996.1 736 249 2 ENSG00000196364.9 PRSS29P chr16 1260952 1263845 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000172997.2 2894 1966 8 ENSG00000261564.1 RP11-616M22.10 chr16 1273751 1276522 - unprocessed_pseudogene KNOWN OTTHUMG00000176426.1 2772 330 3 ENSG00000260991.2 RP11-616M22.9 chr16 1280161 1280544 - unprocessed_pseudogene KNOWN OTTHUMG00000176427.2 384 299 2 ENSG00000260284.1 TPSP2 chr16 1286351 1288837 - unprocessed_pseudogene KNOWN OTTHUMG00000172998.1 2487 610 4 ENSG00000260710.1 RP11-616M22.7 chr16 1294551 1299166 - lincRNA NOVEL OTTHUMG00000172999.1 4616 320 3 ENSG00000274751.1 LA16c-358B7.4 chr16 1305547 1309413 - antisense NOVEL OTTHUMG00000047845.7 3867 3867 1 ENSG00000103275.17 UBE2I chr16 1308880 1327018 + protein_coding KNOWN OTTHUMG00000186701.1 18139 9679 95 ENSG00000261505.1 LA16c-358B7.3 chr16 1317891 1322845 - antisense NOVEL OTTHUMG00000176428.1 4955 4489 4 ENSG00000219274.1 RPS20P2 chr16 1329078 1329777 + processed_pseudogene KNOWN OTTHUMG00000047844.1 700 389 2 ENSG00000226862.1 RP11-569A11.1 chr1 202604268 202605293 + antisense NOVEL OTTHUMG00000041394.1 1026 314 2 ENSG00000007516.12 BAIAP3 chr16 1333601 1349441 + protein_coding KNOWN OTTHUMG00000047833.4 15841 6146 288 ENSG00000007520.3 TSR3 chr16 1349240 1351911 - protein_coding KNOWN OTTHUMG00000047834.3 2672 1243 10 ENSG00000090581.8 GNPTG chr16 1351923 1364113 + protein_coding KNOWN OTTHUMG00000047835.5 12191 4102 57 ENSG00000260425.1 LA16c-316G12.2 chr16 1358900 1361405 - antisense NOVEL OTTHUMG00000176489.1 2506 435 2 ENSG00000059145.17 UNKL chr16 1363205 1414751 - protein_coding KNOWN OTTHUMG00000128553.6 51547 7494 91 ENSG00000265529.1 AL031721.1 chr16 1379289 1379423 - miRNA NOVEL NA 135 135 1 ENSG00000260132.1 LA16c-312E8.2 chr16 1408834 1412248 + antisense NOVEL OTTHUMG00000176550.1 3415 379 2 ENSG00000174109.4 C16orf91 chr16 1419744 1420800 - protein_coding KNOWN OTTHUMG00000176551.1 1057 1057 3 ENSG00000197599.11 CCDC154 chr16 1434383 1444556 - protein_coding KNOWN OTTHUMG00000154097.3 10174 2726 42 ENSG00000279930.1 LA16c-312E8.4 chr16 1437154 1439315 + TEC KNOWN OTTHUMG00000176552.1 2162 2162 1 ENSG00000225620.1 RP11-569A11.2 chr1 202632428 202632911 + lincRNA NOVEL OTTHUMG00000041395.1 484 365 2 ENSG00000103249.16 CLCN7 chr16 1444934 1475580 - protein_coding KNOWN OTTHUMG00000044467.4 30647 8119 129 ENSG00000261641.2 LA16c-390E6.5 chr16 1445343 1446519 + antisense NOVEL OTTHUMG00000176553.1 1177 1124 2 ENSG00000260051.1 LA16c-390E6.4 chr16 1451760 1452653 + antisense NOVEL OTTHUMG00000176554.1 894 570 2 ENSG00000261430.1 LA16c-390E6.3 chr16 1467673 1472684 - sense_intronic NOVEL OTTHUMG00000176555.1 5012 307 2 ENSG00000219027.2 RPS3AP2 chr16 1477830 1478583 + processed_pseudogene KNOWN OTTHUMG00000044469.2 754 754 1 ENSG00000251692.6 PTX4 chr16 1485886 1488981 - protein_coding KNOWN OTTHUMG00000044470.2 3096 1688 9 ENSG00000100726.13 TELO2 chr16 1493344 1510457 + protein_coding KNOWN OTTHUMG00000044471.6 17114 4239 60 ENSG00000187535.12 IFT140 chr16 1510427 1612110 - protein_coding KNOWN OTTHUMG00000128585.3 101684 8168 124 ENSG00000260646.1 LA16c-385E7.1 chr16 1512979 1514675 + lincRNA NOVEL OTTHUMG00000176584.1 1697 682 2 ENSG00000131634.12 TMEM204 chr16 1528688 1555580 + protein_coding KNOWN OTTHUMG00000176585.1 26893 2047 7 ENSG00000120952.4 PRAMEF2 chr1 12857086 12861909 + protein_coding KNOWN OTTHUMG00000001986.1 4824 1642 4 ENSG00000117139.15 KDM5B chr1 202724491 202809470 - protein_coding KNOWN OTTHUMG00000041401.6 84980 12092 111 ENSG00000280062.1 LA16c-380F5.1 chr16 1530715 1533301 + TEC KNOWN OTTHUMG00000176586.1 2587 2587 1 ENSG00000280231.1 LA16c-380F5.3 chr16 1553655 1554130 - TEC KNOWN OTTHUMG00000176601.1 476 476 1 ENSG00000280327.1 LA16c-313F4.1 chr16 1576716 1578371 - TEC KNOWN OTTHUMG00000176602.1 1656 1656 1 ENSG00000260954.1 LA16c-425C2.1 chr16 1579242 1580308 - sense_intronic NOVEL OTTHUMG00000176603.1 1067 404 2 ENSG00000260989.1 LA16c-395F10.2 chr16 1580527 1610328 + antisense NOVEL OTTHUMG00000176587.1 29802 485 3 ENSG00000007545.14 CRAMP1L chr16 1612325 1677908 + protein_coding KNOWN OTTHUMG00000074087.6 65584 8373 65 ENSG00000226890.1 LA16c-395F10.1 chr16 1625628 1626160 - antisense NOVEL OTTHUMG00000157255.1 533 329 2 ENSG00000261732.1 LA16c-431H6.6 chr16 1632259 1686715 + protein_coding NOVEL OTTHUMG00000176609.2 54457 5326 23 ENSG00000206053.11 HN1L chr16 1678256 1702280 + protein_coding KNOWN OTTHUMG00000047859.3 24025 4768 67 ENSG00000278987.1 LA16c-431H6.7 chr16 1688355 1690536 + TEC KNOWN OTTHUMG00000176652.1 2182 2182 1 ENSG00000235449.2 RP11-480I12.2 chr1 202767229 202767418 - processed_pseudogene KNOWN OTTHUMG00000041384.2 190 190 1 ENSG00000138834.11 MAPK8IP3 chr16 1706183 1770317 + protein_coding KNOWN OTTHUMG00000128637.3 64135 10285 150 ENSG00000275092.1 LA16c-329F2.2 chr16 1707252 1707973 + sense_intronic NOVEL OTTHUMG00000186708.1 722 722 1 ENSG00000261399.1 LA16c-329F2.1 chr16 1713527 1714208 - antisense NOVEL OTTHUMG00000176703.1 682 468 2 ENSG00000265820.1 MIR3177 chr16 1734985 1735066 + miRNA KNOWN NA 82 82 1 ENSG00000261207.1 LA16c-361A3.3 chr16 1751559 1752262 - antisense NOVEL OTTHUMG00000176704.1 704 565 2 ENSG00000103024.6 NME3 chr16 1770286 1771730 - protein_coding KNOWN OTTHUMG00000128635.3 1445 1445 40 ENSG00000074071.12 MRPS34 chr16 1771890 1773155 - protein_coding KNOWN OTTHUMG00000128636.2 1266 1097 17 ENSG00000197774.11 EME2 chr16 1773207 1781708 + protein_coding KNOWN OTTHUMG00000176706.3 8502 6909 31 ENSG00000162032.14 SPSB3 chr16 1776712 1793700 - protein_coding KNOWN OTTHUMG00000176746.1 16989 3192 57 ENSG00000095906.15 NUBP2 chr16 1782901 1789191 + protein_coding KNOWN OTTHUMG00000128639.4 6291 4983 79 ENSG00000226148.1 SLC25A39P1 chr1 202796030 202797094 + processed_pseudogene KNOWN OTTHUMG00000041390.1 1065 1065 1 ENSG00000099769.5 IGFALS chr16 1790413 1794971 - protein_coding KNOWN OTTHUMG00000128638.2 4559 2363 6 ENSG00000063854.11 HAGH chr16 1795620 1827194 - protein_coding KNOWN OTTHUMG00000128662.4 31575 5975 74 ENSG00000180185.10 FAHD1 chr16 1826941 1840207 + protein_coding KNOWN OTTHUMG00000128663.2 13267 3039 8 ENSG00000162039.13 MEIOB chr16 1833983 1872178 - protein_coding KNOWN OTTHUMG00000128683.3 38196 2008 56 ENSG00000281549.1 MEIOB chr16 1833987 1884294 - protein_coding PUTATIVE OTTHUMG00000189508.1 50308 1857 13 ENSG00000260541.1 LA16c-429E7.1 chr16 1841020 1843547 - sense_overlapping NOVEL OTTHUMG00000176812.1 2528 220 2 ENSG00000281219.1 LINC00254 chr16 1878285 1884231 - lincRNA KNOWN OTTHUMG00000189509.1 5947 662 3 ENSG00000259947.1 XX-DJ76P10__A.2 chr16 1889114 1890434 + lincRNA NOVEL OTTHUMG00000176814.1 1321 484 2 ENSG00000162040.6 HS3ST6 chr16 1911463 1918440 - protein_coding KNOWN OTTHUMG00000047860.2 6978 1273 2 ENSG00000198736.10 MSRB1 chr16 1938210 1943326 - protein_coding KNOWN OTTHUMG00000129143.2 5117 2157 23 ENSG00000260021.1 RP11-480I12.10 chr1 202810238 202810829 - antisense NOVEL OTTHUMG00000176317.1 592 592 1 ENSG00000140986.7 RPL3L chr16 1943974 1957606 - protein_coding KNOWN OTTHUMG00000128685.2 13633 2758 15 ENSG00000140990.13 NDUFB10 chr16 1959508 1961975 + protein_coding KNOWN OTTHUMG00000128709.2 2468 1070 17 ENSG00000140988.14 RPS2 chr16 1962052 1964860 - protein_coding KNOWN OTTHUMG00000128708.4 2809 2413 77 ENSG00000206811.1 SNORA10 chr16 1962334 1962466 - snoRNA KNOWN NA 133 133 1 ENSG00000207405.1 SNORA64 chr16 1962973 1963106 - snoRNA KNOWN NA 134 134 1 ENSG00000255513.1 AC005363.9 chr16 1963745 1964095 - transcribed_processed_pseudogene KNOWN OTTHUMG00000166081.1 351 351 1 ENSG00000255198.4 SNHG9 chr16 1964959 1965509 + lincRNA KNOWN OTTHUMG00000166082.2 551 551 3 ENSG00000273587.1 SNORA78 chr16 1965184 1965310 + snoRNA KNOWN NA 127 127 1 ENSG00000179580.8 RNF151 chr16 1966823 1968975 + protein_coding KNOWN OTTHUMG00000176852.2 2153 978 11 ENSG00000277602.1 AC005363.11 chr16 1971655 1971896 - lincRNA NOVEL OTTHUMG00000186725.1 242 242 1 ENSG00000228288.5 PCAT6 chr1 202810954 202812156 + antisense NOVEL OTTHUMG00000041399.2 1203 890 6 ENSG00000183751.13 TBL3 chr16 1972037 1982933 + protein_coding KNOWN OTTHUMG00000128710.3 10897 7139 112 ENSG00000196408.10 NOXO1 chr16 1978917 1984192 - protein_coding KNOWN OTTHUMG00000128707.2 5276 2159 43 ENSG00000127554.12 GFER chr16 1984207 1987749 + protein_coding KNOWN OTTHUMG00000176896.1 3543 2687 11 ENSG00000261790.1 AC005606.14 chr16 1984877 1990357 - lincRNA NOVEL OTTHUMG00000176897.1 5481 734 4 ENSG00000127561.13 SYNGR3 chr16 1989660 1994275 + protein_coding KNOWN OTTHUMG00000128711.3 4616 3420 20 ENSG00000167962.11 ZNF598 chr16 1997654 2009823 - protein_coding KNOWN OTTHUMG00000176955.3 12170 4701 79 ENSG00000260107.1 AC005606.15 chr16 1997654 1998374 + lincRNA NOVEL OTTHUMG00000176913.1 721 504 2 ENSG00000183971.5 NPW chr16 2009926 2020755 + protein_coding KNOWN OTTHUMG00000176914.1 10830 1193 7 ENSG00000265386.2 RN7SL219P chr16 2013181 2013476 + misc_RNA KNOWN NA 296 296 1 ENSG00000065054.12 SLC9A3R2 chr16 2025356 2039026 + protein_coding KNOWN OTTHUMG00000176956.2 13671 3550 50 ENSG00000184774.8 MGAT4EP chr1 202820266 202827225 + transcribed_unitary_pseudogene KNOWN OTTHUMG00000041380.3 6960 2810 4 ENSG00000065057.6 NTHL1 chr16 2039815 2047866 - protein_coding KNOWN OTTHUMG00000128744.3 8052 2430 41 ENSG00000103197.15 TSC2 chr16 2047465 2088720 + protein_coding KNOWN OTTHUMG00000128745.10 41256 11121 374 ENSG00000008710.16 PKD1 chr16 2088710 2135898 - protein_coding KNOWN OTTHUMG00000155795.4 47189 18532 345 ENSG00000221656.1 MIR1225 chr16 2090195 2090284 - miRNA KNOWN NA 90 90 1 ENSG00000259933.5 RP11-304L19.1 chr16 2091436 2095433 + sense_overlapping NOVEL OTTHUMG00000176957.3 3998 691 7 ENSG00000261123.1 RP11-304L19.3 chr16 2094830 2097026 - sense_intronic NOVEL OTTHUMG00000177007.1 2197 596 2 ENSG00000276783.1 AC009065.3 chr16 2102257 2102316 - miRNA NOVEL NA 60 60 1 ENSG00000273879.1 MIR6511B1 chr16 2106669 2106753 - miRNA KNOWN NA 85 85 1 ENSG00000261240.1 RP11-304L19.4 chr16 2112335 2113342 + antisense NOVEL OTTHUMG00000177008.1 1008 456 2 ENSG00000260447.1 RP11-304L19.2 chr16 2119207 2120248 + antisense NOVEL OTTHUMG00000177009.1 1042 627 2 ENSG00000214796.7 RP11-480I12.5 chr1 202851828 202861620 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000041379.1 9793 2958 12 ENSG00000200059.1 Y_RNA chr16 2131851 2131950 + misc_RNA NOVEL NA 100 100 1 ENSG00000265867.1 MIR4516 chr16 2133119 2133204 + miRNA KNOWN NA 86 86 1 ENSG00000264397.1 MIR3180-5 chr16 2135977 2136129 - miRNA KNOWN NA 153 153 1 ENSG00000167964.11 RAB26 chr16 2140803 2154165 + protein_coding KNOWN OTTHUMG00000128829.2 13363 2488 57 ENSG00000260260.1 SNHG19 chr16 2154797 2155358 - lincRNA NOVEL OTTHUMG00000177010.1 562 342 2 ENSG00000206630.1 SNORD60 chr16 2155023 2155105 - snoRNA KNOWN NA 83 83 1 ENSG00000281010.1 snoR1 chr16 2155025 2155104 - snoRNA NOVEL NA 80 80 1 ENSG00000131653.11 TRAF7 chr16 2155698 2178129 + protein_coding KNOWN OTTHUMG00000128826.3 22432 4489 55 ENSG00000167971.15 CASKIN1 chr16 2177180 2196525 - protein_coding KNOWN OTTHUMG00000177045.3 19346 5889 26 ENSG00000167965.16 MLST8 chr16 2204248 2209416 + protein_coding KNOWN OTTHUMG00000128827.4 5169 4323 216 ENSG00000234996.3 RP11-480I12.7 chr1 202861754 202875241 + lincRNA NOVEL OTTHUMG00000041389.2 13488 2321 3 ENSG00000252958.1 AC009065.2 chr16 2205030 2205136 - miRNA NOVEL NA 107 107 1 ENSG00000182685.6 BRICD5 chr16 2209253 2211950 - protein_coding KNOWN OTTHUMG00000128831.2 2698 2083 16 ENSG00000261532.1 RP11-304L19.8 chr16 2211997 2212863 + lincRNA NOVEL OTTHUMG00000177046.1 867 580 2 ENSG00000184207.8 PGP chr16 2211997 2214807 - protein_coding KNOWN OTTHUMG00000177047.1 2811 2727 4 ENSG00000167967.14 E4F1 chr16 2223566 2235742 + protein_coding KNOWN OTTHUMG00000177084.2 12177 6402 64 ENSG00000259780.3 RP11-304L19.12 chr16 2235689 2236913 - lincRNA NOVEL OTTHUMG00000177085.1 1225 1225 1 ENSG00000167968.11 DNASE1L2 chr16 2235816 2238711 + protein_coding KNOWN OTTHUMG00000177086.1 2896 2194 40 ENSG00000167969.11 ECI1 chr16 2239395 2252300 - protein_coding KNOWN OTTHUMG00000128830.3 12906 3234 38 ENSG00000261663.1 RP11-304L19.11 chr16 2240487 2241818 + antisense NOVEL OTTHUMG00000177087.1 1332 788 2 ENSG00000205937.10 RNPS1 chr16 2253116 2268412 - protein_coding KNOWN OTTHUMG00000128828.3 15297 8582 143 ENSG00000243113.1 RP11-480I12.9 chr1 202873294 202874326 + transcribed_processed_pseudogene KNOWN OTTHUMG00000041386.1 1033 1033 1 ENSG00000279473.1 AC009065.4 chr16 2253737 2262342 + protein_coding KNOWN NA 8606 537 3 ENSG00000207715.1 AC009065.1 chr16 2267787 2267880 - miRNA NOVEL NA 94 94 1 ENSG00000260778.3 RP11-304L19.13 chr16 2268155 2273418 + lincRNA NOVEL OTTHUMG00000177116.1 5264 980 7 ENSG00000266643.1 MIR3677 chr16 2270713 2270772 + miRNA KNOWN NA 60 60 1 ENSG00000274753.1 MIR940 chr16 2271737 2271846 + miRNA KNOWN NA 110 110 1 ENSG00000264004.1 MIR4717 chr16 2274620 2274691 + miRNA KNOWN NA 72 72 1 ENSG00000167972.12 ABCA3 chr16 2275881 2340746 - protein_coding KNOWN OTTHUMG00000128845.2 64866 7804 98 ENSG00000243445.1 RP11-715J22.1 chr16 2332313 2332732 - processed_pseudogene KNOWN OTTHUMG00000158080.1 420 420 1 ENSG00000238098.7 ABCA17P chr16 2339150 2426699 + unitary_pseudogene KNOWN OTTHUMG00000154348.3 87550 6574 49 ENSG00000162063.11 CCNF chr16 2429394 2458854 + protein_coding KNOWN OTTHUMG00000128858.2 29461 6309 43 ENSG00000183155.4 RABIF chr1 202878957 202889135 - protein_coding KNOWN OTTHUMG00000041400.1 10179 2430 2 ENSG00000260095.1 RP11-715J22.3 chr16 2452581 2452977 - antisense NOVEL OTTHUMG00000177048.1 397 397 1 ENSG00000260874.4 RP11-715J22.4 chr16 2456252 2459979 - lincRNA NOVEL OTTHUMG00000177049.2 3728 879 8 ENSG00000162062.13 C16orf59 chr16 2460080 2464963 + protein_coding KNOWN OTTHUMG00000128859.4 4884 2854 79 ENSG00000274805.1 MIR6768 chr16 2463967 2464038 + miRNA KNOWN NA 72 72 1 ENSG00000259895.1 RP11-715J22.2 chr16 2464950 2468213 - antisense NOVEL OTTHUMG00000177050.1 3264 3264 1 ENSG00000162068.1 NTN3 chr16 2471499 2474145 + protein_coding KNOWN OTTHUMG00000128867.1 2647 1986 6 ENSG00000162065.10 TBC1D24 chr16 2475118 2505734 + protein_coding KNOWN OTTHUMG00000177150.2 30617 9241 39 ENSG00000260293.2 RP11-715J22.6 chr16 2476558 2482173 + sense_intronic NOVEL OTTHUMG00000177151.2 5616 5616 1 ENSG00000260272.1 RP11-20I23.1 chr16 2496032 2520218 + protein_coding PUTATIVE OTTHUMG00000177152.1 24187 1944 3 ENSG00000185883.9 ATP6V0C chr16 2513726 2520223 + protein_coding KNOWN OTTHUMG00000128865.3 6498 1552 15 ENSG00000278791.1 MIR6723 chr1 632325 632413 - miRNA KNOWN NA 89 89 1 ENSG00000243073.3 PRAMEF4 chr1 12879224 12886201 - protein_coding KNOWN OTTHUMG00000001987.2 6978 1828 4 ENSG00000117153.14 KLHL12 chr1 202891100 202928636 - protein_coding KNOWN OTTHUMG00000041385.9 37537 3552 24 ENSG00000259784.1 RP11-20I23.3 chr16 2513965 2527955 + protein_coding PUTATIVE OTTHUMG00000177153.1 13991 596 4 ENSG00000279520.1 RP11-20I23.2 chr16 2516658 2517999 + TEC KNOWN OTTHUMG00000177154.1 1342 1342 1 ENSG00000162066.13 AMDHD2 chr16 2520357 2531422 + protein_coding KNOWN OTTHUMG00000128866.2 11066 4366 106 ENSG00000205923.3 CEMP1 chr16 2530035 2531417 - protein_coding KNOWN OTTHUMG00000177160.1 1383 1383 3 ENSG00000266232.1 MIR3178 chr16 2531922 2532005 - miRNA KNOWN NA 84 84 1 ENSG00000140992.17 PDPK1 chr16 2537964 2603188 + protein_coding KNOWN OTTHUMG00000128874.6 65225 10926 102 ENSG00000261613.2 RP11-20I23.13 chr16 2554060 2556060 - antisense NOVEL OTTHUMG00000184093.1 2001 2001 1 ENSG00000261288.1 RP11-20I23.11 chr16 2554975 2556105 + sense_intronic NOVEL OTTHUMG00000177283.1 1131 572 2 ENSG00000269937.1 RP11-20I23.8 chr16 2561471 2565096 - antisense NOVEL OTTHUMG00000177162.3 3626 3626 1 ENSG00000261140.1 RP11-20I23.6 chr16 2569043 2571936 - antisense NOVEL OTTHUMG00000177163.1 2894 459 2 ENSG00000230280.2 HNRNPA1P59 chr1 202911812 202912729 + processed_pseudogene KNOWN OTTHUMG00000041398.2 918 918 1 ENSG00000260436.1 RP11-20I23.7 chr16 2571570 2572353 - antisense NOVEL OTTHUMG00000177164.1 784 287 2 ENSG00000279568.1 RP11-20I23.5 chr16 2575628 2577373 - TEC KNOWN OTTHUMG00000177165.1 1746 1746 1 ENSG00000280402.1 RP11-20I23.10 chr16 2578395 2579963 + TEC KNOWN OTTHUMG00000177284.1 1569 1569 1 ENSG00000279162.1 CTD-3126B10.2 chr16 2592514 2594563 + TEC KNOWN OTTHUMG00000177285.1 2050 2050 1 ENSG00000261093.1 CTD-3126B10.1 chr16 2597881 2599718 - antisense NOVEL OTTHUMG00000177171.1 1838 1838 1 ENSG00000215154.5 AC141586.5 chr16 2603350 2630494 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000128875.3 27145 2751 8 ENSG00000205918.8 PDPK2P chr16 2616121 2643296 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000177286.3 27176 4426 20 ENSG00000279057.1 CTD-3126B10.5 chr16 2620222 2621794 - TEC KNOWN OTTHUMG00000177287.1 1573 1573 1 ENSG00000260176.1 CTD-3126B10.4 chr16 2644084 2645214 - lincRNA NOVEL OTTHUMG00000177289.1 1131 572 2 ENSG00000260565.5 CTD-2270P14.1 chr16 2660349 2673444 - processed_transcript NOVEL OTTHUMG00000176054.2 13096 8966 22 ENSG00000199471.1 Y_RNA chr1 202914880 202914980 - misc_RNA NOVEL NA 101 101 1 ENSG00000167977.7 KCTD5 chr16 2682475 2709030 + protein_coding KNOWN OTTHUMG00000128930.3 26556 3420 20 ENSG00000279901.1 CTD-2270P14.2 chr16 2683106 2684764 + TEC KNOWN OTTHUMG00000177290.1 1659 1659 1 ENSG00000172382.8 PRSS27 chr16 2712418 2720551 - protein_coding KNOWN OTTHUMG00000128929.2 8134 5921 19 ENSG00000222055.1 AC092117.1 chr16 2713019 2713100 + miRNA NOVEL NA 82 82 1 ENSG00000205913.5 SRRM2-AS1 chr16 2737076 2752600 - antisense NOVEL OTTHUMG00000177357.1 15525 5858 20 ENSG00000167978.15 SRRM2 chr16 2752329 2772538 + protein_coding KNOWN OTTHUMG00000177358.4 20210 13266 142 ENSG00000265864.1 AC092117.2 chr16 2769872 2769949 + miRNA NOVEL NA 78 78 1 ENSG00000103363.13 TCEB2 chr16 2771414 2777297 - protein_coding KNOWN OTTHUMG00000154125.2 5884 1128 18 ENSG00000276791.1 CTD-2270P14.5 chr16 2777319 2780568 + lincRNA NOVEL OTTHUMG00000177359.2 3250 3250 1 ENSG00000103355.11 PRSS33 chr16 2783953 2787948 - protein_coding KNOWN OTTHUMG00000177360.2 3996 2112 28 ENSG00000159346.11 ADIPOR1 chr1 202940823 202958572 - protein_coding KNOWN OTTHUMG00000041391.8 17750 3193 31 ENSG00000221719.1 SNORA3 chr16 2796408 2796532 - snoRNA NOVEL NA 125 125 1 ENSG00000215148.6 PRSS41 chr16 2798485 2805132 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000128932.3 6648 957 10 ENSG00000007038.9 PRSS21 chr16 2817180 2826304 + protein_coding KNOWN OTTHUMG00000128931.2 9125 1967 43 ENSG00000262154.1 EIF1P4 chr16 2822659 2822993 - processed_pseudogene KNOWN OTTHUMG00000177361.1 335 335 1 ENSG00000162078.10 ZG16B chr16 2830169 2839585 + protein_coding KNOWN OTTHUMG00000128933.3 9417 2665 19 ENSG00000172460.13 PRSS30P chr16 2839568 2842744 - unitary_pseudogene KNOWN OTTHUMG00000128963.3 3177 2961 21 ENSG00000005001.8 PRSS22 chr16 2852727 2858170 - protein_coding KNOWN OTTHUMG00000128961.2 5444 2387 33 ENSG00000263325.1 LA16c-325D7.1 chr16 2857898 2859726 + antisense NOVEL OTTHUMG00000177362.1 1829 265 3 ENSG00000263280.1 LA16c-325D7.2 chr16 2866348 2867618 - lincRNA NOVEL OTTHUMG00000177363.1 1271 667 2 ENSG00000162076.11 FLYWCH2 chr16 2883186 2899382 + protein_coding KNOWN OTTHUMG00000128962.2 16197 1365 15 ENSG00000159348.11 CYB5R1 chr1 202961869 202967280 - protein_coding KNOWN OTTHUMG00000041387.2 5412 4504 35 ENSG00000059122.15 FLYWCH1 chr16 2911937 2951208 + protein_coding KNOWN OTTHUMG00000177364.2 39272 8419 72 ENSG00000262959.2 LA16c-321D4.1 chr16 2922662 2923202 - processed_pseudogene KNOWN OTTHUMG00000177365.2 541 541 1 ENSG00000262482.1 LA16c-321D4.2 chr16 2939714 2954276 - antisense NOVEL OTTHUMG00000177366.1 14563 510 3 ENSG00000131650.12 KREMEN2 chr16 2963944 2968383 + protein_coding KNOWN OTTHUMG00000128976.2 4440 2614 49 ENSG00000127564.15 PKMYT1 chr16 2968024 2980539 - protein_coding KNOWN OTTHUMG00000128975.2 12516 5034 103 ENSG00000162073.12 PAQR4 chr16 2969245 2973489 + protein_coding KNOWN OTTHUMG00000128977.2 4245 2972 13 ENSG00000274367.1 LA16c-380H5.6 chr16 2981175 2981591 - lincRNA NOVEL OTTHUMG00000186733.1 417 417 1 ENSG00000262152.5 LA16c-380H5.1 chr16 2988961 2994509 + lincRNA NOVEL OTTHUMG00000183929.1 5549 4284 17 ENSG00000270097.1 LA16c-380H5.3 chr16 2999902 3000389 + lincRNA NOVEL OTTHUMG00000177448.1 488 346 2 ENSG00000270168.1 LA16c-380H5.4 chr16 3001300 3002016 + lincRNA NOVEL OTTHUMG00000183930.1 717 491 2 ENSG00000234761.1 RP11-38O14.5 chr1 202986557 202988582 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000042049.2 2026 1239 4 ENSG00000262362.1 LA16c-380H5.2 chr16 3003431 3005101 - sense_overlapping NOVEL OTTHUMG00000177449.1 1671 608 2 ENSG00000272079.2 LA16c-380H5.5 chr16 3006120 3007388 + lincRNA NOVEL OTTHUMG00000185716.2 1269 1269 1 ENSG00000213937.3 CLDN9 chr16 3012456 3014505 + protein_coding KNOWN OTTHUMG00000129000.1 2050 2050 1 ENSG00000184697.6 CLDN6 chr16 3014712 3020071 - protein_coding KNOWN OTTHUMG00000128999.2 5360 1739 8 ENSG00000006327.12 TNFRSF12A chr16 3018445 3022383 + protein_coding KNOWN OTTHUMG00000129001.2 3939 1848 23 ENSG00000103145.9 HCFC1R1 chr16 3022620 3024286 - protein_coding KNOWN OTTHUMG00000177450.1 1667 1433 33 ENSG00000131652.12 THOC6 chr16 3024027 3027755 + protein_coding KNOWN OTTHUMG00000177451.1 3729 1860 82 ENSG00000162069.13 CCDC64B chr16 3027682 3036926 - protein_coding KNOWN OTTHUMG00000177452.1 9245 4690 38 ENSG00000205890.3 RP11-473M20.5 chr16 3032481 3039133 + antisense NOVEL OTTHUMG00000177453.1 6653 3061 8 ENSG00000008516.15 MMP25 chr16 3046681 3060726 + protein_coding KNOWN OTTHUMG00000177475.1 14046 4126 23 ENSG00000231547.1 RP11-38O14.6 chr1 202999738 203000352 + unprocessed_pseudogene KNOWN OTTHUMG00000042050.2 615 310 2 ENSG00000261971.5 MMP25-AS1 chr16 3051096 3059370 - antisense NOVEL OTTHUMG00000177474.2 8275 6155 27 ENSG00000008517.15 IL32 chr16 3065297 3082192 + protein_coding KNOWN OTTHUMG00000167498.6 16896 3209 203 ENSG00000252561.1 RNU1-125P chr16 3069523 3069651 + snRNA KNOWN NA 129 129 1 ENSG00000262370.4 RP11-473M20.9 chr16 3076911 3087100 - lincRNA NOVEL OTTHUMG00000177477.1 10190 1326 10 ENSG00000200204.1 RNU1-22P chr16 3086143 3086300 + snRNA KNOWN NA 158 158 1 ENSG00000130182.6 ZSCAN10 chr16 3088890 3099317 - protein_coding KNOWN OTTHUMG00000177478.2 10428 3319 42 ENSG00000263011.1 RP11-473M20.11 chr16 3106764 3109576 + sense_overlapping NOVEL OTTHUMG00000177490.1 2813 302 3 ENSG00000263214.1 ZNF205-AS1 chr16 3110460 3115598 - antisense NOVEL OTTHUMG00000177517.1 5139 1426 5 ENSG00000122386.9 ZNF205 chr16 3112560 3120517 + protein_coding KNOWN OTTHUMG00000148676.2 7958 2330 36 ENSG00000263072.4 ZNF213-AS1 chr16 3116042 3134882 - antisense NOVEL OTTHUMG00000177518.1 18841 3276 27 ENSG00000163444.10 TMEM183A chr1 203007386 203024848 + protein_coding KNOWN OTTHUMG00000042051.3 17463 4026 23 ENSG00000085644.12 ZNF213 chr16 3129777 3142805 + protein_coding KNOWN OTTHUMG00000177519.1 13029 6443 43 ENSG00000228146.5 CASP16 chr16 3144219 3149963 + protein_coding KNOWN OTTHUMG00000177520.1 5745 3428 20 ENSG00000261889.1 RP11-473M20.16 chr16 3156736 3157483 - lincRNA NOVEL OTTHUMG00000177551.1 748 748 1 ENSG00000262521.1 AJ003147.8 chr16 3181233 3184018 - lincRNA NOVEL OTTHUMG00000177552.1 2786 454 2 ENSG00000262668.1 AJ003147.9 chr16 3188212 3224779 + antisense NOVEL OTTHUMG00000177553.1 36568 629 4 ENSG00000168124.2 OR1F1 chr16 3204247 3205188 + protein_coding KNOWN OTTHUMG00000133153.1 942 942 1 ENSG00000203581.7 OR1F2P chr16 3215611 3216543 + unprocessed_pseudogene KNOWN OTTHUMG00000177554.2 933 933 1 ENSG00000010539.10 ZNF200 chr16 3222325 3236221 - protein_coding KNOWN OTTHUMG00000129317.3 13897 7498 39 ENSG00000103313.10 MEFV chr16 3242028 3256627 - protein_coding KNOWN OTTHUMG00000129324.7 14600 4819 121 ENSG00000281005.1 LINC00921 chr16 3263743 3267567 + lincRNA KNOWN OTTHUMG00000189522.1 3825 2468 5 ENSG00000143847.14 PPFIA4 chr1 203026498 203078740 + protein_coding KNOWN OTTHUMG00000042123.3 52243 9707 176 ENSG00000006194.9 ZNF263 chr16 3263800 3301401 + protein_coding KNOWN OTTHUMG00000129323.2 37602 6945 23 ENSG00000279330.1 AJ003147.11 chr16 3273609 3275807 + TEC KNOWN OTTHUMG00000177555.1 2199 2199 1 ENSG00000279031.1 LA16c-360H6.1 chr16 3292879 3293403 + TEC KNOWN OTTHUMG00000177556.1 525 525 1 ENSG00000140993.9 TIGD7 chr16 3298832 3305729 - protein_coding KNOWN OTTHUMG00000129325.2 6898 4197 18 ENSG00000162086.13 ZNF75A chr16 3305406 3318852 + protein_coding KNOWN OTTHUMG00000129356.2 13447 8063 34 ENSG00000262899.1 LA16c-360H6.3 chr16 3307573 3308393 - antisense NOVEL OTTHUMG00000177557.1 821 821 1 ENSG00000262554.1 LA16c-360H6.2 chr16 3308609 3308816 + transcribed_processed_pseudogene KNOWN OTTHUMG00000177558.1 208 208 1 ENSG00000262316.1 RP11-433P17.1 chr16 3323192 3323925 - processed_pseudogene KNOWN OTTHUMG00000177559.1 734 734 1 ENSG00000168158.3 OR2C1 chr16 3355889 3357294 + protein_coding KNOWN OTTHUMG00000090505.3 1406 1406 1 ENSG00000262621.3 LA16c-306E5.2 chr16 3365099 3486953 + protein_coding NOVEL OTTHUMG00000177580.2 121855 5605 17 ENSG00000122180.4 MYOG chr1 203083132 203086036 - protein_coding KNOWN OTTHUMG00000042127.1 2905 1528 3 ENSG00000262118.1 RP11-433P17.3 chr16 3367719 3369246 - processed_pseudogene KNOWN OTTHUMG00000177597.1 1528 1528 1 ENSG00000263177.1 RP11-433P17.2 chr16 3369957 3370906 - processed_pseudogene KNOWN OTTHUMG00000177598.1 950 950 1 ENSG00000232196.3 MTRNR2L4 chr16 3370979 3372740 - protein_coding KNOWN OTTHUMG00000184964.2 1762 1762 1 ENSG00000140987.18 ZSCAN32 chr16 3382081 3401065 - protein_coding KNOWN OTTHUMG00000129357.3 18985 4013 64 ENSG00000103343.11 ZNF174 chr16 3401235 3409370 + protein_coding KNOWN OTTHUMG00000129358.2 8136 2876 16 ENSG00000167981.5 ZNF597 chr16 3432422 3443542 - protein_coding KNOWN OTTHUMG00000129359.3 11121 5513 4 ENSG00000122390.16 NAA60 chr16 3443611 3486963 + protein_coding KNOWN OTTHUMG00000150268.4 43353 5639 172 ENSG00000263212.2 LA16c-306E5.3 chr16 3458071 3515564 + processed_transcript NOVEL OTTHUMG00000177721.2 57494 529 5 ENSG00000273776.1 MIR6126 chr16 3485381 3485469 - miRNA KNOWN NA 89 89 1 ENSG00000215131.9 C16orf90 chr16 3493484 3495480 - protein_coding KNOWN OTTHUMG00000154627.3 1997 963 6 ENSG00000187545.5 PRAMEF10 chr1 12892896 12898270 - protein_coding KNOWN OTTHUMG00000001981.3 5375 1525 4 ENSG00000163485.14 ADORA1 chr1 203090654 203167405 + protein_coding KNOWN OTTHUMG00000042125.2 76752 4191 24 ENSG00000240311.1 LA16c-306E5.1 chr16 3496201 3496768 + processed_pseudogene KNOWN OTTHUMG00000158082.2 568 568 1 ENSG00000103351.11 CLUAP1 chr16 3500924 3539048 + protein_coding KNOWN OTTHUMG00000177581.3 38125 7798 87 ENSG00000278942.1 LA16c-390H2.1 chr16 3533429 3534258 - TEC KNOWN OTTHUMG00000177560.1 830 830 1 ENSG00000167984.15 NLRC3 chr16 3539033 3577400 - protein_coding KNOWN OTTHUMG00000177561.5 38368 6686 88 ENSG00000262312.2 LA16c-390H2.4 chr16 3542739 3545785 + antisense NOVEL OTTHUMG00000177582.1 3047 2955 3 ENSG00000261938.1 RP11-461A8.1 chr16 3581181 3583266 + lincRNA NOVEL OTTHUMG00000177599.1 2086 329 2 ENSG00000188827.9 SLX4 chr16 3581181 3611598 - protein_coding KNOWN OTTHUMG00000074089.3 30418 8591 26 ENSG00000213918.9 DNASE1 chr16 3611728 3680143 + protein_coding KNOWN OTTHUMG00000129426.4 68416 13801 83 ENSG00000263235.1 RP11-461A8.4 chr16 3650636 3651703 - sense_overlapping NOVEL OTTHUMG00000177736.1 1068 1068 1 ENSG00000126602.9 TRAP1 chr16 3651639 3717597 - protein_coding KNOWN OTTHUMG00000129427.2 65959 5227 112 ENSG00000234775.1 RP11-335O13.7 chr1 203127259 203127954 - antisense NOVEL OTTHUMG00000043020.1 696 380 2 ENSG00000276754.1 RP11-461A8.5 chr16 3686998 3687380 + antisense NOVEL OTTHUMG00000186755.1 383 383 1 ENSG00000005339.11 CREBBP chr16 3725054 3880726 - protein_coding KNOWN OTTHUMG00000129431.2 155673 15068 103 ENSG00000262516.1 RP11-95J11.1 chr16 3840528 3841010 + processed_pseudogene KNOWN OTTHUMG00000177722.2 483 483 1 ENSG00000262888.1 RP11-462G12.2 chr16 3931217 3946305 - sense_overlapping NOVEL OTTHUMG00000177610.1 15089 774 3 ENSG00000262185.1 RP11-462G12.1 chr16 3947609 3950444 - sense_overlapping NOVEL OTTHUMG00000177611.1 2836 1394 2 ENSG00000162104.8 ADCY9 chr16 3953387 4116185 - protein_coding KNOWN OTTHUMG00000177612.1 162799 10358 36 ENSG00000263159.1 RP11-462G12.4 chr16 4032012 4032936 + antisense NOVEL OTTHUMG00000177614.1 925 244 2 ENSG00000262471.1 RP11-95P2.4 chr16 4130555 4130820 + processed_pseudogene KNOWN OTTHUMG00000177615.1 266 266 1 ENSG00000263105.1 RP11-95P2.3 chr16 4180117 4183515 - lincRNA NOVEL OTTHUMG00000177616.1 3399 318 2 ENSG00000185739.12 SRL chr16 4189374 4242080 - protein_coding KNOWN OTTHUMG00000177617.1 52707 5702 19 ENSG00000224671.2 RP11-335O13.8 chr1 203144694 203152579 - antisense NOVEL OTTHUMG00000043021.2 7886 353 4 ENSG00000262468.4 LINC01569 chr16 4245825 4253789 - lincRNA NOVEL OTTHUMG00000177618.1 7965 2270 10 ENSG00000090447.10 TFAP4 chr16 4257186 4273075 - protein_coding KNOWN OTTHUMG00000129435.3 15890 7867 31 ENSG00000126603.7 GLIS2 chr16 4314761 4339597 + protein_coding KNOWN OTTHUMG00000129467.1 24837 4469 14 ENSG00000262686.1 GLIS2-AS1 chr16 4324667 4328340 - lincRNA NOVEL OTTHUMG00000177619.1 3674 340 4 ENSG00000217930.6 PAM16 chr16 4331549 4355607 - protein_coding KNOWN OTTHUMG00000129466.2 24059 2383 66 ENSG00000262712.1 RP11-295D4.1 chr16 4335870 4337818 - sense_intronic NOVEL OTTHUMG00000177620.1 1949 1949 1 ENSG00000103426.11 CORO7-PAM16 chr16 4340251 4420494 - protein_coding KNOWN OTTHUMG00000177664.1 80244 3815 71 ENSG00000280063.1 RP11-295D4.3 chr16 4346694 4348648 - TEC KNOWN OTTHUMG00000177665.1 1955 1955 1 ENSG00000262246.4 CORO7 chr16 4354542 4425705 - protein_coding KNOWN OTTHUMG00000129465.3 71164 8793 312 ENSG00000168140.4 VASN chr16 4371848 4383528 + protein_coding KNOWN OTTHUMG00000129469.1 11681 2806 2 ENSG00000133055.7 MYBPH chr1 203167811 203175813 - protein_coding KNOWN OTTHUMG00000042121.1 8003 1805 24 ENSG00000103423.12 DNAJA3 chr16 4425805 4456775 + protein_coding KNOWN OTTHUMG00000129470.2 30971 7071 76 ENSG00000277170.1 RP11-295D4.4 chr16 4426902 4427380 + sense_intronic NOVEL OTTHUMG00000186758.1 479 479 1 ENSG00000277440.1 RP11-295D4.5 chr16 4430522 4431103 + sense_intronic NOVEL OTTHUMG00000186763.1 582 582 1 ENSG00000275515.1 RP11-295D4.7 chr16 4433202 4433387 - processed_pseudogene KNOWN OTTHUMG00000187870.2 186 186 1 ENSG00000153406.12 NMRAL1 chr16 4461680 4495763 - protein_coding KNOWN OTTHUMG00000129468.3 34084 3541 79 ENSG00000103415.10 HMOX2 chr16 4474690 4510347 + protein_coding KNOWN OTTHUMG00000129473.2 35658 3793 97 ENSG00000089486.15 CDIP1 chr16 4510675 4538828 - protein_coding KNOWN OTTHUMG00000177172.3 28154 4268 63 ENSG00000278434.1 RP11-709D24.8 chr16 4532216 4533670 - sense_intronic NOVEL OTTHUMG00000186764.1 1455 1455 1 ENSG00000205832.7 C16orf96 chr16 4556490 4600714 + protein_coding KNOWN OTTHUMG00000176519.2 44225 3823 16 ENSG00000261789.1 RP11-709D24.5 chr16 4560001 4561662 - antisense NOVEL OTTHUMG00000177156.1 1662 1662 1 ENSG00000133048.11 CHI3L1 chr1 203178931 203186749 - protein_coding KNOWN OTTHUMG00000042122.2 7819 3408 21 ENSG00000261612.1 SUB1P3 chr16 4562814 4563128 - processed_pseudogene KNOWN OTTHUMG00000176542.2 315 315 1 ENSG00000153443.11 UBALD1 chr16 4608883 4615027 - protein_coding KNOWN OTTHUMG00000129472.6 6145 3619 23 ENSG00000102858.11 MGRN1 chr16 4616493 4690974 + protein_coding KNOWN OTTHUMG00000176436.10 74482 10219 172 ENSG00000263955.2 RN7SL850P chr16 4633591 4633881 - misc_RNA KNOWN NA 291 291 1 ENSG00000261442.1 RP11-709D24.6 chr16 4634329 4640623 - antisense NOVEL OTTHUMG00000177157.1 6295 1543 2 ENSG00000278700.1 Metazoa_SRP chr16 4658851 4659151 + misc_RNA NOVEL NA 301 301 1 ENSG00000276641.1 MIR6769A chr16 4671318 4671390 + miRNA KNOWN NA 73 73 1 ENSG00000168101.13 NUDT16L1 chr16 4693694 4695859 + protein_coding KNOWN OTTHUMG00000129471.6 2166 2068 14 ENSG00000168096.13 ANKS3 chr16 4696510 4734378 - protein_coding KNOWN OTTHUMG00000129478.9 37869 7868 256 ENSG00000266994.1 RP11-127I20.7 chr16 4730115 4752565 - processed_transcript NOVEL OTTHUMG00000182296.1 22451 556 5 ENSG00000133063.14 CHIT1 chr1 203212827 203273641 - protein_coding KNOWN OTTHUMG00000042126.4 60815 7730 73 ENSG00000166246.12 C16orf71 chr16 4734272 4749396 + protein_coding KNOWN OTTHUMG00000129480.5 15125 4656 34 ENSG00000103199.12 ZNF500 chr16 4748239 4767624 - protein_coding KNOWN OTTHUMG00000176543.4 19386 6465 27 ENSG00000276096.1 Metazoa_SRP chr16 4756338 4756633 + misc_RNA NOVEL NA 296 296 1 ENSG00000140623.12 SEPT12 chr16 4777669 4788521 - protein_coding KNOWN OTTHUMG00000129481.5 10853 2100 50 ENSG00000267795.4 SMIM22 chr16 4788397 4796491 + protein_coding KNOWN OTTHUMG00000177849.2 8095 1762 40 ENSG00000267077.1 RP11-127I20.5 chr16 4795265 4796532 - antisense NOVEL OTTHUMG00000177884.1 1268 720 2 ENSG00000067836.11 ROGDI chr16 4796968 4802950 - protein_coding KNOWN OTTHUMG00000129479.8 5983 3683 110 ENSG00000140632.15 GLYR1 chr16 4803203 4847342 - protein_coding KNOWN OTTHUMG00000129530.5 44140 5470 111 ENSG00000275056.1 RP11-127I20.8 chr16 4839244 4840334 - sense_intronic NOVEL OTTHUMG00000186765.1 1091 1091 1 ENSG00000118900.13 UBN1 chr16 4846665 4882360 + protein_coding KNOWN OTTHUMG00000129531.4 35696 8551 75 ENSG00000236523.2 NPM1P40 chr1 203255743 203256475 + processed_pseudogene KNOWN OTTHUMG00000042124.2 733 733 1 ENSG00000118898.14 PPL chr16 4882507 4960741 - protein_coding KNOWN OTTHUMG00000129528.7 78235 7686 60 ENSG00000281522.1 Y_RNA chr16 4951773 4951891 - misc_RNA NOVEL NA 119 119 1 ENSG00000103184.10 SEC14L5 chr16 4958317 5019158 + protein_coding KNOWN OTTHUMG00000176942.2 60842 6477 21 ENSG00000267072.1 RP11-165E7.1 chr16 5010909 5042250 + lincRNA NOVEL OTTHUMG00000177999.1 31342 521 2 ENSG00000103174.10 NAGPA chr16 5024844 5034141 - protein_coding KNOWN OTTHUMG00000090515.6 9298 5484 83 ENSG00000033011.10 ALG1 chr16 5033960 5087379 + protein_coding KNOWN OTTHUMG00000129529.9 53420 4496 70 ENSG00000153446.14 C16orf89 chr16 5044122 5066110 - protein_coding KNOWN OTTHUMG00000159314.4 21989 2067 35 ENSG00000260882.1 RP11-10K17.3 chr16 5078168 5078605 - processed_pseudogene KNOWN OTTHUMG00000177109.2 438 438 1 ENSG00000118894.13 EEF2KMT chr16 5084304 5097808 - protein_coding KNOWN OTTHUMG00000129527.10 13505 3128 54 ENSG00000267070.1 RP11-10K17.6 chr16 5098739 5142595 + lincRNA NOVEL OTTHUMG00000178000.1 43857 531 4 ENSG00000231507.1 LINC01353 chr1 203287152 203288801 + lincRNA NOVEL OTTHUMG00000041219.1 1650 837 6 ENSG00000273963.1 ENPP7P14 chr16 5110793 5148685 - unprocessed_pseudogene KNOWN OTTHUMG00000187875.1 37893 1040 3 ENSG00000260431.2 RP11-382N13.6 chr16 5207088 5207439 + processed_pseudogene KNOWN OTTHUMG00000177252.2 352 352 1 ENSG00000261811.1 RP11-382N13.2 chr16 5215394 5220594 - lincRNA NOVEL OTTHUMG00000177110.1 5201 272 3 ENSG00000279877.1 RP11-420N3.3 chr16 5239802 6776014 + processed_transcript NOVEL OTTHUMG00000189464.1 1536213 829 7 ENSG00000260411.4 RP11-420N3.2 chr16 5239815 5600151 + lincRNA NOVEL OTTHUMG00000177111.3 360337 1580 3 ENSG00000260817.2 RP11-382N13.4 chr16 5260686 5261043 - processed_pseudogene KNOWN OTTHUMG00000177113.2 358 358 1 ENSG00000221809.1 AC074051.1 chr16 5263223 5263371 - miRNA NOVEL NA 149 149 1 ENSG00000242278.1 RP11-382N13.1 chr16 5270174 5270954 + processed_pseudogene KNOWN OTTHUMG00000158083.1 781 781 1 ENSG00000267182.1 SNRPCP20 chr16 5289200 5289409 - processed_pseudogene KNOWN OTTHUMG00000177253.1 210 210 1 ENSG00000261007.2 RP11-382N13.3 chr16 5365797 5366688 + processed_pseudogene KNOWN OTTHUMG00000177114.2 892 892 1 ENSG00000233791.4 LINC01136 chr1 203298758 203305309 - lincRNA NOVEL OTTHUMG00000035835.2 6552 2725 9 ENSG00000275398.1 AC074051.2 chr16 5369821 5369915 - miRNA NOVEL NA 95 95 1 ENSG00000260338.1 LINC01570 chr16 5601169 5616196 - antisense NOVEL OTTHUMG00000177115.1 15028 1107 5 ENSG00000273648.1 MIR8065 chr16 5632467 5632566 + miRNA KNOWN NA 100 100 1 ENSG00000221257.1 AC012175.1 chr16 5760687 5760788 - miRNA NOVEL NA 102 102 1 ENSG00000270440.1 RP11-19H6.1 chr16 5838131 5838661 - processed_pseudogene KNOWN OTTHUMG00000184827.1 531 531 1 ENSG00000078328.18 RBFOX1 chr16 6019094 7713338 + protein_coding KNOWN OTTHUMG00000129551.10 1694245 8213 223 ENSG00000280000.1 RP11-509E10.3 chr16 6037210 6038977 + TEC KNOWN OTTHUMG00000176668.1 1768 1768 1 ENSG00000257180.1 RP11-509E10.1 chr16 6056975 6092954 + sense_intronic NOVEL OTTHUMG00000170520.1 35980 776 4 ENSG00000260835.1 RP11-468I15.1 chr16 6573767 6577359 + sense_intronic NOVEL OTTHUMG00000176671.1 3593 572 2 ENSG00000278975.1 RP11-185J20.1 chr16 6703883 6705558 + TEC KNOWN OTTHUMG00000176672.1 1676 1676 1 ENSG00000159388.5 BTG2 chr1 203305491 203309602 + protein_coding KNOWN OTTHUMG00000035834.4 4112 2757 5 ENSG00000259963.1 RP11-185J20.2 chr16 6721786 6721960 + processed_pseudogene KNOWN OTTHUMG00000176673.1 175 175 1 ENSG00000252080.1 RNU7-99P chr16 6748908 6748969 + snRNA KNOWN NA 62 62 1 ENSG00000200869.1 RNU6-457P chr16 6873899 6874005 + snRNA KNOWN NA 107 107 1 ENSG00000212189.1 RNU6-328P chr16 7004007 7004112 - snRNA KNOWN NA 106 106 1 ENSG00000240419.1 RP11-545E8.1 chr16 7126293 7126639 - processed_pseudogene KNOWN OTTHUMG00000158084.1 347 347 1 ENSG00000261198.1 RP11-26O3.1 chr16 7614230 7614992 - antisense NOVEL OTTHUMG00000176678.1 763 567 2 ENSG00000252138.1 SNORA40 chr16 7726841 7726951 - snoRNA NOVEL NA 111 111 1 ENSG00000260289.1 CTD-2535I10.1 chr16 7888489 7894395 - lincRNA NOVEL OTTHUMG00000176683.1 5907 445 2 ENSG00000222109.1 AC093515.1 chr16 7899338 7899431 - miRNA NOVEL NA 94 94 1 ENSG00000260003.1 RP11-279O17.2 chr16 8276263 8295700 - lincRNA NOVEL OTTHUMG00000176684.1 19438 600 5 ENSG00000204510.4 PRAMEF7 chr1 12916610 12920482 + protein_coding KNOWN OTTHUMG00000001982.3 3873 1660 7 ENSG00000202300.1 RNU6-487P chr1 203318996 203319099 - snRNA KNOWN NA 104 104 1 ENSG00000261319.1 RP11-279O17.1 chr16 8298492 8299772 + lincRNA NOVEL OTTHUMG00000176058.1 1281 1281 1 ENSG00000264844.1 AC018767.1 chr16 8309539 8309657 - miRNA NOVEL NA 119 119 1 ENSG00000260058.1 RP11-279O17.3 chr16 8309962 8357860 + lincRNA NOVEL OTTHUMG00000176685.1 47899 481 4 ENSG00000259819.1 RP11-568A19.1 chr16 8369864 8376276 + lincRNA NOVEL OTTHUMG00000176686.1 6413 405 3 ENSG00000260379.1 RP11-483K5.2 chr16 8508069 8508585 + processed_pseudogene KNOWN OTTHUMG00000176687.1 517 456 2 ENSG00000261066.1 RP11-483K5.3 chr16 8526549 8532013 - lincRNA NOVEL OTTHUMG00000176688.1 5465 214 2 ENSG00000232258.5 TMEM114 chr16 8537605 8590193 - protein_coding KNOWN OTTHUMG00000172868.2 52589 1419 16 ENSG00000067365.13 METTL22 chr16 8621683 8649654 + protein_coding KNOWN OTTHUMG00000129694.4 27972 8254 93 ENSG00000279357.1 RP11-475D10.4 chr16 8666762 8667271 + TEC KNOWN OTTHUMG00000176763.1 510 510 1 ENSG00000183044.10 ABAT chr16 8674565 8784575 + protein_coding KNOWN OTTHUMG00000048201.4 110011 9744 137 ENSG00000122176.10 FMOD chr1 203340628 203351489 - protein_coding KNOWN OTTHUMG00000035910.2 10862 3310 8 ENSG00000243954.3 RN7SL743P chr16 8683254 8683551 + misc_RNA KNOWN NA 298 298 1 ENSG00000281170.1 AC007224.1 chr16 8683461 8683543 + miRNA NOVEL NA 83 83 1 ENSG00000238417.1 RNU7-63P chr16 8705456 8705517 - snRNA KNOWN NA 62 62 1 ENSG00000260764.1 RP11-475D10.5 chr16 8731416 8731559 - processed_pseudogene KNOWN OTTHUMG00000176764.1 144 144 1 ENSG00000184857.7 TMEM186 chr16 8780384 8797648 - protein_coding KNOWN OTTHUMG00000129696.2 17265 1978 5 ENSG00000140650.10 PMM2 chr16 8788823 8849331 + protein_coding KNOWN OTTHUMG00000129697.2 60509 7645 95 ENSG00000260350.1 RP11-152P23.2 chr16 8847650 8848724 - antisense NOVEL OTTHUMG00000176817.1 1075 430 2 ENSG00000260276.2 RP11-77H9.2 chr16 8848105 8860456 + antisense NOVEL OTTHUMG00000176818.2 12352 2642 6 ENSG00000153048.9 CARHSP1 chr16 8852942 8869012 - protein_coding KNOWN OTTHUMG00000129695.3 16071 5577 78 ENSG00000259939.1 RP11-77H9.5 chr16 8853312 8854347 + antisense NOVEL OTTHUMG00000176899.1 1036 409 2 ENSG00000229652.1 RP11-435P24.2 chr1 203353365 203353651 - processed_pseudogene KNOWN OTTHUMG00000035903.1 287 287 1 ENSG00000261481.1 RP11-77H9.6 chr16 8869251 8870032 + antisense NOVEL OTTHUMG00000176902.1 782 498 2 ENSG00000187555.13 USP7 chr16 8892094 8964514 - protein_coding KNOWN OTTHUMG00000176903.4 72421 7969 227 ENSG00000260979.1 RP11-77H9.8 chr16 8962706 8966990 + lincRNA NOVEL OTTHUMG00000176992.1 4285 427 2 ENSG00000261392.1 RP11-473I1.6 chr16 9068554 9072412 + lincRNA NOVEL OTTHUMG00000177051.1 3859 753 3 ENSG00000182831.10 C16orf72 chr16 9091648 9121640 + protein_coding KNOWN OTTHUMG00000178147.4 29993 15875 7 ENSG00000263244.2 RP11-473I1.9 chr16 9104848 9113181 + 3prime_overlapping_ncrna NOVEL OTTHUMG00000178148.2 8334 8334 1 ENSG00000260349.1 RP11-473I1.5 chr16 9105834 9107174 - antisense NOVEL OTTHUMG00000177053.1 1341 731 2 ENSG00000220793.5 RPL21P119 chr16 9156402 9156881 - processed_pseudogene KNOWN OTTHUMG00000158086.1 480 480 1 ENSG00000261617.1 RP11-243A14.1 chr16 9355588 9408093 + lincRNA NOVEL OTTHUMG00000177055.1 52506 5298 3 ENSG00000261397.1 LINC01177 chr16 9441294 9444985 - lincRNA NOVEL OTTHUMG00000177056.1 3692 536 4 ENSG00000271588.1 LARP7P1 chr1 203400266 203400581 - processed_pseudogene KNOWN OTTHUMG00000184464.1 316 316 1 ENSG00000261075.1 LINC01195 chr16 9446010 9455505 - lincRNA NOVEL OTTHUMG00000177057.1 9496 451 5 ENSG00000260071.1 RP11-418I22.2 chr16 9466655 9517564 + lincRNA NOVEL OTTHUMG00000177058.1 50910 796 6 ENSG00000200468.1 RNA5SP403 chr16 9564390 9564497 - rRNA KNOWN NA 108 108 1 ENSG00000252927.1 RNA5SP404 chr16 9600097 9600228 + rRNA KNOWN NA 132 132 1 ENSG00000260362.1 RP11-297M9.1 chr16 9666885 9676843 - lincRNA NOVEL OTTHUMG00000177060.1 9959 660 2 ENSG00000183454.12 GRIN2A chr16 9753404 10182754 - protein_coding KNOWN OTTHUMG00000129721.6 429351 15985 88 ENSG00000275533.1 AC026423.1 chr16 9955461 9955563 - miRNA NOVEL NA 103 103 1 ENSG00000261810.1 RP11-895K13.2 chr16 10033684 10037297 + antisense NOVEL OTTHUMG00000177088.1 3614 488 2 ENSG00000261647.1 IMPDH1P11 chr16 10111382 10112885 + processed_pseudogene KNOWN OTTHUMG00000177089.1 1504 1504 1 ENSG00000266439.2 RN7SL493P chr16 10221775 10222073 - misc_RNA KNOWN NA 299 299 1 ENSG00000188783.5 PRELP chr1 203475828 203491352 + protein_coding KNOWN OTTHUMG00000035911.1 15525 5747 3 ENSG00000166669.12 ATF7IP2 chr16 10326434 10483638 + protein_coding KNOWN OTTHUMG00000129749.3 157205 6391 113 ENSG00000260756.1 RP11-609N14.1 chr16 10351440 10352752 - lincRNA NOVEL OTTHUMG00000177090.1 1313 1313 1 ENSG00000279662.1 RP11-609N14.4 chr16 10445309 10449747 - TEC KNOWN OTTHUMG00000177092.1 4439 4439 1 ENSG00000199482.1 RNU6-633P chr16 10496272 10496374 + snRNA KNOWN NA 103 103 1 ENSG00000260468.1 LINC01290 chr16 10514842 10528202 - lincRNA NOVEL OTTHUMG00000177103.1 13361 502 2 ENSG00000213853.8 EMP2 chr16 10528422 10580698 - protein_coding KNOWN OTTHUMG00000129752.3 52277 8718 12 ENSG00000256013.1 RP11-27M24.1 chr16 10529440 10532082 + antisense NOVEL OTTHUMG00000168065.1 2643 533 2 ENSG00000260310.1 RP11-27M24.2 chr16 10576499 10578183 - sense_intronic NOVEL OTTHUMG00000177104.1 1685 435 2 ENSG00000153060.6 TEKT5 chr16 10627501 10694945 - protein_coding KNOWN OTTHUMG00000129750.2 67445 1775 15 ENSG00000263279.1 RP11-109M19.1 chr16 10691273 10692973 + antisense NOVEL OTTHUMG00000177343.1 1701 483 2 ENSG00000188770.8 OPTC chr1 203494143 203508864 + protein_coding KNOWN OTTHUMG00000036100.2 14722 1359 12 ENSG00000263241.1 RP11-109M19.4 chr16 10718633 10719762 - unprocessed_pseudogene KNOWN OTTHUMG00000177344.1 1130 1130 1 ENSG00000262107.1 RP11-109M19.5 chr16 10719833 10720015 + unprocessed_pseudogene KNOWN OTTHUMG00000177345.1 183 183 1 ENSG00000261904.1 RP11-109M19.3 chr16 10720015 10721464 - unprocessed_pseudogene KNOWN OTTHUMG00000177346.1 1450 1450 1 ENSG00000262322.1 RP11-109M19.2 chr16 10721698 10723068 - unprocessed_pseudogene KNOWN OTTHUMG00000177347.1 1371 1371 1 ENSG00000262259.1 CTD-2318B16.4 chr16 10723065 10723355 - unprocessed_pseudogene KNOWN OTTHUMG00000177348.1 291 291 1 ENSG00000263196.1 CTD-2318B16.3 chr16 10723424 10723766 - unprocessed_pseudogene KNOWN OTTHUMG00000177349.1 343 343 1 ENSG00000262158.1 CTD-2318B16.2 chr16 10723836 10724617 - unprocessed_pseudogene KNOWN OTTHUMG00000177350.1 782 782 1 ENSG00000262381.1 CTD-2318B16.1 chr16 10724620 10725296 - unprocessed_pseudogene KNOWN OTTHUMG00000177351.1 677 677 1 ENSG00000103274.9 NUBP1 chr16 10743786 10769351 + protein_coding KNOWN OTTHUMG00000129751.2 25566 1955 55 ENSG00000166676.13 TVP23A chr16 10760919 10818794 - protein_coding KNOWN OTTHUMG00000177389.2 57876 5281 80 ENSG00000058668.13 ATP2B4 chr1 203626561 203744081 + protein_coding KNOWN OTTHUMG00000035906.4 117521 9721 76 ENSG00000262488.1 RP11-876N24.1 chr16 10840384 10841544 - processed_pseudogene KNOWN OTTHUMG00000177390.1 1161 1161 1 ENSG00000262151.1 RP11-876N24.2 chr16 10864914 10888752 - antisense NOVEL OTTHUMG00000177391.1 23839 742 4 ENSG00000179583.16 CIITA chr16 10877198 10932281 + protein_coding KNOWN OTTHUMG00000129753.4 55084 14152 151 ENSG00000182108.8 DEXI chr16 10928891 10942460 - protein_coding KNOWN OTTHUMG00000129785.3 13570 1722 8 ENSG00000280153.1 RP11-876N24.3 chr16 10933903 10936280 + TEC KNOWN OTTHUMG00000177392.1 2378 2378 1 ENSG00000275673.1 RP11-876N24.7 chr16 10934258 10934887 - sense_intronic NOVEL OTTHUMG00000186776.1 630 630 1 ENSG00000263013.1 RP11-876N24.5 chr16 10938886 10940044 - sense_intronic NOVEL OTTHUMG00000177394.1 1159 1159 1 ENSG00000262222.1 RP11-876N24.4 chr16 10940719 10943021 + antisense NOVEL OTTHUMG00000177395.1 2303 2147 2 ENSG00000038532.13 CLEC16A chr16 10944488 11182189 + protein_coding KNOWN OTTHUMG00000152915.6 237702 12387 99 ENSG00000229917.2 RPL7P46 chr16 11027024 11027763 + processed_pseudogene KNOWN OTTHUMG00000152920.2 740 740 1 ENSG00000236035.2 RP11-90O23.1 chr1 203656969 203657760 - processed_pseudogene KNOWN OTTHUMG00000035904.2 792 792 1 ENSG00000274038.1 RP11-66H6.4 chr16 11056556 11057034 + sense_intronic NOVEL OTTHUMG00000186777.1 479 479 1 ENSG00000262020.1 RP11-66H6.3 chr16 11066496 11071102 - antisense NOVEL OTTHUMG00000177398.1 4607 610 3 ENSG00000263033.2 RP11-396B14.2 chr16 11196177 11224969 + lincRNA NOVEL OTTHUMG00000177399.2 28793 1055 3 ENSG00000263179.1 HNRNPCP4 chr16 11242653 11243552 + processed_pseudogene KNOWN OTTHUMG00000177408.1 900 900 1 ENSG00000175643.8 RMI2 chr16 11249619 11351762 + protein_coding KNOWN OTTHUMG00000129793.3 102144 2701 13 ENSG00000185338.4 SOCS1 chr16 11254405 11256179 - protein_coding KNOWN OTTHUMG00000129792.1 1775 1225 2 ENSG00000178279.3 TNP2 chr16 11267748 11269533 - protein_coding KNOWN OTTHUMG00000172315.1 1786 1786 3 ENSG00000178257.3 PRM3 chr16 11273218 11273641 - protein_coding KNOWN OTTHUMG00000172316.2 424 424 1 ENSG00000212228.1 SNORA48 chr16 11274113 11274236 - snoRNA NOVEL NA 124 124 1 ENSG00000122304.9 PRM2 chr16 11275639 11276480 - protein_coding KNOWN OTTHUMG00000172317.1 842 724 4 ENSG00000221643.1 SNORA77 chr1 203729581 203729705 + snoRNA KNOWN NA 125 125 1 ENSG00000175646.3 PRM1 chr16 11280836 11281350 - protein_coding KNOWN OTTHUMG00000090521.1 515 424 2 ENSG00000221801.1 MIR548H2 chr16 11306440 11306527 - miRNA KNOWN NA 88 88 1 ENSG00000199668.1 Y_RNA chr16 11315067 11315178 + misc_RNA NOVEL NA 112 112 1 ENSG00000263080.1 RP11-485G7.5 chr16 11341809 11345211 - antisense NOVEL OTTHUMG00000177409.1 3403 1134 4 ENSG00000280717.1 AC009121.2 chr16 11345483 11345560 - protein_coding NOVEL NA 78 78 1 ENSG00000262703.1 RP11-485G7.6 chr16 11348143 11349321 - antisense NOVEL OTTHUMG00000177410.1 1179 1095 2 ENSG00000238774.1 AC009121.1 chr16 11348727 11348796 + miRNA NOVEL NA 70 70 1 ENSG00000188897.7 CTD-3088G3.8 chr16 11359845 11523588 - protein_coding NOVEL OTTHUMG00000178167.4 163744 12005 115 ENSG00000262636.1 CTD-3088G3.4 chr16 11380859 11381118 - processed_pseudogene KNOWN OTTHUMG00000177412.1 260 260 1 ENSG00000262999.1 CTD-3088G3.6 chr16 11465260 11473174 + antisense NOVEL OTTHUMG00000177414.1 7915 2279 3 ENSG00000122188.11 LAX1 chr1 203765176 203776233 + protein_coding KNOWN OTTHUMG00000035908.3 11058 3198 15 ENSG00000189067.11 LITAF chr16 11547722 11636381 - protein_coding KNOWN OTTHUMG00000177415.4 88660 5060 80 ENSG00000184602.5 SNN chr16 11668414 11679159 + protein_coding KNOWN OTTHUMG00000090535.1 10746 3312 2 ENSG00000153066.11 TXNDC11 chr16 11679080 11742878 - protein_coding KNOWN OTTHUMG00000177467.1 63799 4292 57 ENSG00000262420.3 RP11-490O6.2 chr16 11741910 11744506 + antisense NOVEL OTTHUMG00000177468.1 2597 2597 1 ENSG00000122299.10 ZC3H7A chr16 11750586 11797267 - protein_coding KNOWN OTTHUMG00000129825.2 46682 7076 133 ENSG00000274505.1 Metazoa_SRP chr16 11753666 11753948 - misc_RNA NOVEL NA 283 283 1 ENSG00000277369.1 RP11-486I11.2 chr16 11797468 11798275 + lincRNA NOVEL OTTHUMG00000186782.1 808 808 1 ENSG00000262117.4 BCAR4 chr16 11819829 11828845 - lincRNA NOVEL OTTHUMG00000177469.1 9017 1328 20 ENSG00000171490.11 RSL1D1 chr16 11833850 11851585 - protein_coding KNOWN OTTHUMG00000129824.4 17736 6167 71 ENSG00000263307.1 RP11-166B2.8 chr16 11851649 11895611 + antisense NOVEL OTTHUMG00000177500.1 43963 562 2 ENSG00000207434.1 RNU6-1072P chr1 12922554 12922660 + snRNA KNOWN NA 107 107 1 ENSG00000058673.14 ZC3H11A chr1 203795654 203854124 + protein_coding KNOWN OTTHUMG00000035909.6 58471 9700 141 ENSG00000103342.11 GSPT1 chr16 11868128 11916082 - protein_coding KNOWN OTTHUMG00000172956.1 47955 8018 92 ENSG00000261560.1 RP11-166B2.3 chr16 11881075 11882569 - sense_intronic NOVEL OTTHUMG00000172957.1 1495 1495 1 ENSG00000260318.1 COX6CP1 chr16 11903923 11904137 - processed_pseudogene KNOWN OTTHUMG00000172958.1 215 215 1 ENSG00000261216.1 RP11-166B2.5 chr16 11908208 11908916 + antisense NOVEL OTTHUMG00000172959.1 709 384 2 ENSG00000266163.1 AC007216.1 chr16 11915661 11915738 - miRNA NOVEL NA 78 78 1 ENSG00000277458.1 RP11-166B2.9 chr16 11926199 11926307 + unprocessed_pseudogene KNOWN OTTHUMG00000187878.1 109 109 1 ENSG00000234719.7 RP11-166B2.1 chr16 11927373 11976643 - protein_coding NOVEL OTTHUMG00000166261.4 49271 2719 38 ENSG00000048462.9 TNFRSF17 chr16 11965107 11968068 + protein_coding KNOWN OTTHUMG00000129826.2 2962 1118 9 ENSG00000260224.1 UBL5P4 chr16 11968508 11968743 - processed_pseudogene KNOWN OTTHUMG00000172960.1 236 236 1 ENSG00000048471.12 SNX29 chr16 11976737 12574289 + protein_coding KNOWN OTTHUMG00000129827.3 597553 11298 63 ENSG00000257315.1 ZBED6 chr1 203796309 203800558 + protein_coding KNOWN OTTHUMG00000170422.2 4250 4250 1 ENSG00000260488.1 RP11-166B2.7 chr16 11976851 11977850 - antisense NOVEL OTTHUMG00000172962.1 1000 601 2 ENSG00000241641.1 RPS23P6 chr16 12081237 12081902 + processed_pseudogene KNOWN OTTHUMG00000158098.1 666 431 2 ENSG00000175604.2 RP11-276H1.3 chr16 12086746 12090302 - antisense NOVEL OTTHUMG00000173257.1 3557 1974 2 ENSG00000261293.1 RP11-276H1.2 chr16 12093627 12095307 - antisense NOVEL OTTHUMG00000172961.2 1681 502 2 ENSG00000238685.1 ACA64 chr16 12297197 12297323 - snoRNA NOVEL NA 127 127 1 ENSG00000261394.1 RP11-165M1.3 chr16 12366982 12372582 - antisense NOVEL OTTHUMG00000173258.1 5601 539 2 ENSG00000260723.1 RP11-165M1.2 chr16 12372812 12373899 + sense_intronic NOVEL OTTHUMG00000173259.1 1088 448 4 ENSG00000278979.1 RP11-165M1.1 chr16 12374355 12376032 + TEC KNOWN OTTHUMG00000173260.1 1678 1678 1 ENSG00000260601.1 RP11-552C15.1 chr16 12545482 12546684 + sense_intronic NOVEL OTTHUMG00000173261.1 1203 520 2 ENSG00000259876.1 CTD-3037G24.4 chr16 12556353 12557694 - antisense NOVEL OTTHUMG00000177166.1 1342 563 2 ENSG00000227417.3 RP11-397P13.6 chr1 203805621 203806263 - processed_pseudogene KNOWN OTTHUMG00000057666.2 643 643 1 ENSG00000259899.1 CTD-3037G24.3 chr16 12560756 12611044 - antisense NOVEL OTTHUMG00000177167.1 50289 698 2 ENSG00000274834.1 CTD-3037G24.5 chr16 12614451 12614852 + lincRNA NOVEL OTTHUMG00000186788.1 402 402 1 ENSG00000103381.10 CPPED1 chr16 12659799 12804017 - protein_coding KNOWN OTTHUMG00000167711.3 144219 6484 12 ENSG00000264733.1 MIR4718 chr16 12720321 12720371 + miRNA KNOWN NA 51 51 1 ENSG00000260378.1 CTD-2583P5.1 chr16 12745873 12757835 + antisense NOVEL OTTHUMG00000177169.1 11963 786 5 ENSG00000261158.1 CTD-2583P5.3 chr16 12759282 12761162 + antisense NOVEL OTTHUMG00000177170.1 1881 927 2 ENSG00000199474.1 SNORA27 chr16 12842487 12842610 - snoRNA NOVEL NA 124 124 1 ENSG00000241932.1 RP11-14K2.1 chr16 12881170 12881493 + processed_pseudogene KNOWN OTTHUMG00000158100.1 324 324 1 ENSG00000237515.7 SHISA9 chr16 12901620 13240413 + protein_coding KNOWN OTTHUMG00000154258.8 338794 10155 12 ENSG00000263984.1 AC092380.1 chr16 13043472 13043576 + miRNA NOVEL NA 105 105 1 ENSG00000223505.2 RP11-397P13.7 chr1 203835585 203835912 - processed_pseudogene KNOWN OTTHUMG00000057667.2 328 328 1 ENSG00000262116.1 AC009134.1 chr16 13197606 13204907 - antisense NOVEL OTTHUMG00000177333.1 7302 443 3 ENSG00000262801.4 U91319.1 chr16 13246316 13562918 + lincRNA NOVEL OTTHUMG00000177334.1 316603 826 8 ENSG00000262011.1 AC003009.1 chr16 13331368 13332583 - antisense NOVEL OTTHUMG00000177335.1 1216 686 2 ENSG00000262235.2 TMF1P1 chr16 13458326 13458698 + processed_pseudogene KNOWN OTTHUMG00000177336.2 373 373 1 ENSG00000262267.4 U95743.1 chr16 13730137 13779760 - lincRNA NOVEL OTTHUMG00000177354.1 49624 1013 9 ENSG00000175595.13 ERCC4 chr16 13920157 13952345 + protein_coding KNOWN OTTHUMG00000048194.3 32189 8460 39 ENSG00000242307.1 RPS26P52 chr16 13922332 13922679 - processed_pseudogene KNOWN OTTHUMG00000158102.1 348 348 1 ENSG00000262732.1 CTD-2135D7.2 chr16 13930677 13935635 - antisense NOVEL OTTHUMG00000177375.1 4959 4959 3 ENSG00000263234.1 CTD-2135D7.3 chr16 13953155 13954825 + lincRNA NOVEL OTTHUMG00000177376.1 1671 582 2 ENSG00000262097.1 CTD-2135D7.5 chr16 14009280 14016016 - lincRNA NOVEL OTTHUMG00000177377.1 6737 1101 5 ENSG00000182004.11 SNRPE chr1 203861603 203870550 + protein_coding KNOWN OTTHUMG00000035985.2 8948 1474 24 ENSG00000261856.1 CTD-2135D7.4 chr16 14018880 14021077 - lincRNA NOVEL OTTHUMG00000177378.1 2198 885 3 ENSG00000186260.15 MKL2 chr16 14071321 14266773 + protein_coding KNOWN OTTHUMG00000177379.2 195453 16578 98 ENSG00000276564.1 CTA-276F8.1 chr16 14150833 14153235 + lincRNA NOVEL OTTHUMG00000177380.1 2403 2403 1 ENSG00000262529.1 CTA-276F8.2 chr16 14191820 14200277 - antisense NOVEL OTTHUMG00000177381.1 8458 415 3 ENSG00000262470.2 TVP23CP2 chr16 14200357 14200979 + transcribed_processed_pseudogene KNOWN OTTHUMG00000177382.2 623 623 1 ENSG00000201075.2 Y_RNA chr16 14275508 14275600 + misc_RNA NOVEL NA 93 93 1 ENSG00000262454.1 RP11-65J21.3 chr16 14302288 14326353 + lincRNA NOVEL OTTHUMG00000177423.1 24066 741 6 ENSG00000207639.1 MIR193B chr16 14303967 14304049 + miRNA KNOWN NA 83 83 1 ENSG00000199130.2 MIR365A chr16 14309270 14309380 + miRNA KNOWN NA 111 111 1 ENSG00000260009.1 RP11-65J21.1 chr16 14363109 14370266 - lincRNA NOVEL OTTHUMG00000176060.1 7158 518 2 ENSG00000236430.1 KRT8P29 chr1 203872574 203874187 - processed_pseudogene KNOWN OTTHUMG00000036051.1 1614 1371 2 ENSG00000263257.1 RP11-65J21.4 chr16 14408039 14418872 - lincRNA NOVEL OTTHUMG00000177424.1 10834 580 3 ENSG00000140694.15 PARN chr16 14435701 14632728 - protein_coding KNOWN OTTHUMG00000173199.1 197028 4382 165 ENSG00000242430.3 RN7SL274P chr16 14601823 14602094 - misc_RNA KNOWN NA 272 272 1 ENSG00000103429.9 BFAR chr16 14632815 14669236 + protein_coding KNOWN OTTHUMG00000129848.3 36422 4401 49 ENSG00000238964.1 RNU7-125P chr16 14643788 14643849 + snRNA KNOWN NA 62 62 1 ENSG00000069764.8 PLA2G10 chr16 14672545 14694669 - protein_coding KNOWN OTTHUMG00000048069.4 22125 1116 9 ENSG00000261523.1 RP11-82O18.2 chr16 14695567 14707055 - antisense NOVEL OTTHUMG00000173200.1 11489 579 3 ENSG00000224712.9 NPIPA3 chr16 14708944 14952073 + protein_coding KNOWN OTTHUMG00000166262.5 243130 2188 51 ENSG00000254609.1 RP11-719K4.3 chr16 14727282 14733347 - unprocessed_pseudogene KNOWN OTTHUMG00000166263.1 6066 355 3 ENSG00000261695.1 RP11-719K4.6 chr16 14734685 14746177 - antisense NOVEL OTTHUMG00000173201.1 11493 579 3 ENSG00000232917.5 HSPE1P6 chr1 203903723 203904013 - processed_pseudogene KNOWN OTTHUMG00000036052.1 291 291 1 ENSG00000254852.7 NPIPA2 chr16 14748066 14765413 + protein_coding KNOWN OTTHUMG00000166264.3 17348 1428 23 ENSG00000183426.14 NPIPA1 chr16 14750813 14952060 + protein_coding KNOWN OTTHUMG00000090663.5 201248 7340 87 ENSG00000255037.1 RP11-680G24.1 chr16 14766402 14770075 - unprocessed_pseudogene KNOWN OTTHUMG00000166265.1 3674 258 2 ENSG00000255277.3 ABCC6P2 chr16 14820792 14824702 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000166266.2 3911 1077 7 ENSG00000103512.13 NOMO1 chr16 14833681 14896160 + protein_coding KNOWN OTTHUMG00000090541.2 62480 5819 116 ENSG00000270734.1 RP11-719K4.7 chr16 14862380 14862749 - processed_pseudogene KNOWN OTTHUMG00000184823.1 370 370 1 ENSG00000257264.3 MIR3179-1 chr16 14901499 14902174 + lincRNA KNOWN OTTHUMG00000170530.1 676 676 1 ENSG00000274301.1 MIR3179-3 chr16 14901508 14901591 + miRNA KNOWN NA 84 84 1 ENSG00000263918.1 MIR3670-1 chr16 14907717 14907781 + miRNA KNOWN NA 65 65 1 ENSG00000258354.1 MIR3180-1 chr16 14909887 14911345 - lincRNA KNOWN OTTHUMG00000170531.1 1459 1459 1 ENSG00000237379.1 CBX1P3 chr1 203954640 203955780 + processed_pseudogene KNOWN OTTHUMG00000036053.2 1141 527 2 ENSG00000265537.1 MIR3180-3 chr16 14911220 14911313 + miRNA KNOWN NA 94 94 1 ENSG00000183458.12 RP11-958N24.1 chr16 14911551 14935708 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000166303.2 24158 6830 35 ENSG00000207425.1 Y_RNA chr16 14915457 14915556 - misc_RNA NOVEL NA 100 100 1 ENSG00000275259.1 MIR6511A2 chr16 14925937 14926003 + miRNA KNOWN NA 67 67 1 ENSG00000278265.1 MIR6770-1 chr16 14930820 14930879 + miRNA KNOWN NA 60 60 1 ENSG00000273804.1 RP11-680G24.7 chr16 14953012 14953120 - unprocessed_pseudogene KNOWN OTTHUMG00000187879.1 109 109 1 ENSG00000179889.17 PDXDC1 chr16 14974591 15139339 + protein_coding KNOWN OTTHUMG00000166304.4 164749 9410 230 ENSG00000261819.1 RP11-680G24.4 chr16 14988259 14990160 - processed_pseudogene KNOWN OTTHUMG00000173202.1 1902 1902 1 ENSG00000238728.1 MIR1972-1 chr16 15010321 15010397 - miRNA KNOWN NA 77 77 1 ENSG00000275910.1 RP11-680G24.6 chr16 15015828 15016390 - antisense NOVEL OTTHUMG00000186790.1 563 563 1 ENSG00000176754.11 LINC00303 chr1 204032447 204041265 - lincRNA KNOWN OTTHUMG00000036054.3 8819 1891 16 ENSG00000260872.1 RP11-680G24.5 chr16 15018106 15020488 - antisense NOVEL OTTHUMG00000173203.2 2383 2383 1 ENSG00000157045.7 NTAN1 chr16 15037853 15056079 - protein_coding KNOWN OTTHUMG00000129849.2 18227 3540 78 ENSG00000085721.11 RRN3 chr16 15060022 15094317 - protein_coding KNOWN OTTHUMG00000129847.2 34296 4156 86 ENSG00000260735.1 RP11-72I8.1 chr16 15094411 15109197 + antisense NOVEL OTTHUMG00000173204.1 14787 2598 4 ENSG00000188599.16 NPIPP1 chr16 15104312 15123498 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000184230.2 19187 1437 21 ENSG00000270580.4 PKD1P6 chr16 15104723 15131601 - processed_transcript NOVEL OTTHUMG00000168168.2 26879 3043 22 ENSG00000250251.5 PKD1P6 chr16 15125242 15154564 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156664.4 29323 6015 48 ENSG00000277652.1 AC139256.1 chr16 15130078 15130137 - miRNA NOVEL NA 60 60 1 ENSG00000275105.1 MIR6511B1 chr16 15134066 15134150 - miRNA KNOWN NA 85 85 1 ENSG00000207294.1 Y_RNA chr16 15150697 15150796 + misc_RNA NOVEL NA 100 100 1 ENSG00000143842.13 SOX13 chr1 204073115 204127743 + protein_coding KNOWN OTTHUMG00000036050.5 54629 7420 67 ENSG00000264115.1 MIR3180-4 chr16 15154850 15155002 - miRNA KNOWN NA 153 153 1 ENSG00000257391.1 MIR3180-4 chr16 15154903 15157020 + lincRNA KNOWN OTTHUMG00000170535.1 2118 2118 1 ENSG00000264182.1 AC126763.1 chr16 15158457 15158521 - miRNA NOVEL NA 65 65 1 ENSG00000277770.1 RP11-72I8.2 chr16 15358978 15362674 + unprocessed_pseudogene KNOWN OTTHUMG00000187881.1 3697 263 2 ENSG00000183793.12 NPIPA5 chr16 15363624 15381047 - protein_coding KNOWN OTTHUMG00000166305.2 17424 1520 23 ENSG00000261130.4 RP11-1021N1.1 chr16 15395754 15515348 + protein_coding NOVEL OTTHUMG00000173205.1 119595 1052 9 ENSG00000156968.8 MPV17L chr16 15395754 15413268 + protein_coding KNOWN OTTHUMG00000129882.3 17515 6009 12 ENSG00000166780.9 C16orf45 chr16 15434295 15625028 + protein_coding KNOWN OTTHUMG00000129883.5 190734 3688 53 ENSG00000166783.18 KIAA0430 chr16 15594386 15643166 - protein_coding KNOWN OTTHUMG00000129884.5 48781 10919 165 ENSG00000257769.1 CTB-193M12.1 chr16 15608474 15610563 + antisense NOVEL OTTHUMG00000169372.1 2090 530 2 ENSG00000234064.1 RP11-450I1.2 chr1 12926162 12928253 + unprocessed_pseudogene KNOWN OTTHUMG00000001983.1 2092 1139 2 ENSG00000143845.13 ETNK2 chr1 204131062 204152003 - protein_coding KNOWN OTTHUMG00000036061.4 20942 4472 54 ENSG00000275184.1 MIR6506 chr16 15611030 15611095 - miRNA KNOWN NA 66 66 1 ENSG00000072864.11 NDE1 chr16 15643267 15726353 + protein_coding KNOWN OTTHUMG00000129885.4 83087 8039 76 ENSG00000272213.2 AC026401.1 chr16 15643281 15643390 + miRNA NOVEL NA 110 110 1 ENSG00000262380.1 CTB-193M12.3 chr16 15683290 15684570 + sense_intronic NOVEL OTTHUMG00000177383.1 1281 503 2 ENSG00000280206.1 CTB-193M12.5 chr16 15701237 15702118 + TEC KNOWN OTTHUMG00000184128.1 882 882 1 ENSG00000133392.15 MYH11 chr16 15703135 15857033 - protein_coding KNOWN OTTHUMG00000129935.3 153899 16141 253 ENSG00000279866.1 CTB-193M12.4 chr16 15704410 15705984 + TEC KNOWN OTTHUMG00000177384.1 1575 1575 1 ENSG00000263335.1 AF001548.5 chr16 15726674 15732993 + antisense NOVEL OTTHUMG00000177385.1 6320 836 2 ENSG00000263065.1 AF001548.6 chr16 15741151 15741791 + antisense NOVEL OTTHUMG00000177386.1 641 550 2 ENSG00000280074.1 AF001548.4 chr16 15745605 15747573 - TEC KNOWN OTTHUMG00000177387.1 1969 1969 1 ENSG00000261065.1 RP11-74C13.4 chr1 204131062 204131966 + antisense NOVEL OTTHUMG00000036063.1 905 444 2 ENSG00000280429.1 AF001548.3 chr16 15790975 15792717 - TEC KNOWN OTTHUMG00000177388.1 1743 1743 1 ENSG00000133393.11 FOPNL chr16 15865720 15888625 - protein_coding KNOWN OTTHUMG00000129923.3 22906 2391 41 ENSG00000206778.1 RNU6-213P chr16 15877163 15877266 - snRNA KNOWN NA 104 104 1 ENSG00000262171.1 CTA-972D3.2 chr16 15885029 15886158 + antisense NOVEL OTTHUMG00000177352.1 1130 536 2 ENSG00000215003.4 RPL15P20 chr16 15931697 15932294 - processed_pseudogene KNOWN OTTHUMG00000158104.2 598 598 1 ENSG00000103222.17 ABCC1 chr16 15949577 16143074 + protein_coding KNOWN OTTHUMG00000048267.5 193498 7575 123 ENSG00000241067.2 RPL17P40 chr16 16094192 16095209 - processed_pseudogene KNOWN OTTHUMG00000158110.2 1018 413 2 ENSG00000091262.13 ABCC6 chr16 16148928 16223522 - protein_coding KNOWN OTTHUMG00000129967.5 74595 7559 125 ENSG00000262332.1 RP11-517A5.7 chr16 16223027 16224261 + antisense NOVEL OTTHUMG00000177316.1 1235 542 2 ENSG00000103226.16 NOMO3 chr16 16232495 16294814 + protein_coding KNOWN OTTHUMG00000177317.21 62320 8274 153 ENSG00000230550.1 RP11-74C13.3 chr1 204141408 204143009 + antisense NOVEL OTTHUMG00000036062.1 1602 1126 3 ENSG00000263029.1 RP11-517A5.6 chr16 16260866 16261235 - processed_pseudogene KNOWN OTTHUMG00000177318.1 370 370 1 ENSG00000262848.1 RP11-517A5.5 chr16 16290135 16292242 - antisense NOVEL OTTHUMG00000177319.1 2108 567 2 ENSG00000263198.1 RP11-517A5.4 chr16 16292178 16294806 - antisense NOVEL OTTHUMG00000170525.22 2629 2278 2 ENSG00000257381.3 MIR3179-4 chr16 16300159 16300242 + miRNA KNOWN NA 84 84 1 ENSG00000264722.1 MIR3670-2 chr16 16306370 16306434 + miRNA KNOWN NA 65 65 1 ENSG00000257366.1 MIR3180-2 chr16 16308542 16310000 - lincRNA KNOWN OTTHUMG00000170527.1 1459 1459 1 ENSG00000265373.1 MIR3180-1 chr16 16309875 16309968 + miRNA KNOWN NA 94 94 1 ENSG00000244257.5 PKD1P1 chr16 16310341 16334190 + unprocessed_pseudogene KNOWN OTTHUMG00000133625.1 23850 6805 32 ENSG00000206706.1 Y_RNA chr16 16314112 16314211 - misc_RNA NOVEL NA 100 100 1 ENSG00000183889.11 AC138969.4 chr16 16317444 16350590 + protein_coding NOVEL OTTHUMG00000133624.3 33147 7897 92 ENSG00000143839.13 REN chr1 204154819 204166322 - protein_coding KNOWN OTTHUMG00000036059.1 11504 1447 10 ENSG00000278221.1 MIR6511A2 chr16 16324588 16324654 + miRNA KNOWN NA 67 67 1 ENSG00000277698.1 MIR6770-1 chr16 16329305 16329364 + miRNA KNOWN NA 60 60 1 ENSG00000277920.1 RP11-958N24.4 chr16 16351545 16351653 - unprocessed_pseudogene KNOWN OTTHUMG00000187884.1 109 109 1 ENSG00000227827.3 RP11-958N24.2 chr16 16356224 16377507 + unprocessed_pseudogene KNOWN OTTHUMG00000166306.1 21284 9932 31 ENSG00000276311.1 MIR6511A2 chr16 16368876 16368942 + miRNA KNOWN NA 67 67 1 ENSG00000277330.1 AC138969.1 chr16 16372604 16372663 + miRNA NOVEL NA 60 60 1 ENSG00000214967.5 NPIPA7 chr16 16379055 16393954 + protein_coding KNOWN OTTHUMG00000166307.2 14900 1401 13 ENSG00000261181.1 RP11-467M13.2 chr16 16394912 16398594 - unprocessed_pseudogene KNOWN OTTHUMG00000173318.1 3683 258 2 ENSG00000261362.1 RP11-467M13.3 chr16 16541217 16541847 - processed_pseudogene KNOWN OTTHUMG00000173319.1 631 631 1 ENSG00000260126.1 RP11-14N9.2 chr16 16658227 16664135 + lincRNA NOVEL OTTHUMG00000177276.1 5909 674 3 ENSG00000225522.2 RP11-203F10.1 chr1 204183006 204183537 + processed_pseudogene KNOWN OTTHUMG00000036055.2 532 532 1 ENSG00000280488.1 AC092326.1 chr16 16709402 16709528 - miRNA NOVEL NA 127 127 1 ENSG00000279729.1 RP11-14N9.1 chr16 16760905 16762465 + TEC KNOWN OTTHUMG00000177277.1 1561 1561 1 ENSG00000261748.1 RP11-419L9.1 chr16 16952502 16953468 - processed_pseudogene KNOWN OTTHUMG00000177270.1 967 967 1 ENSG00000279490.1 CTD-2576D5.1 chr16 17082295 17085049 - TEC KNOWN OTTHUMG00000176102.1 2755 2755 1 ENSG00000260675.1 CTD-2576D5.3 chr16 17094351 17094927 - unprocessed_pseudogene KNOWN OTTHUMG00000177271.1 577 497 2 ENSG00000260405.1 CTD-2576D5.2 chr16 17096202 17096421 - processed_pseudogene KNOWN OTTHUMG00000177272.1 220 220 1 ENSG00000103489.10 XYLT1 chr16 17101769 17470881 - protein_coding KNOWN OTTHUMG00000129975.3 369113 11004 21 ENSG00000261448.1 CTD-2576D5.4 chr16 17134504 17138736 + antisense NOVEL OTTHUMG00000177273.1 4233 641 3 ENSG00000279410.1 RP11-1102P22.3 chr16 17192863 17194232 - TEC KNOWN OTTHUMG00000177590.1 1370 1370 1 ENSG00000279415.1 RP11-1102P22.1 chr16 17227023 17228000 - TEC KNOWN OTTHUMG00000177274.1 978 978 1 ENSG00000170498.8 KISS1 chr1 204190341 204196486 - protein_coding KNOWN OTTHUMG00000036060.1 6146 709 6 ENSG00000279620.1 RP11-1102P22.2 chr16 17249674 17251395 - TEC KNOWN OTTHUMG00000177275.1 1722 1722 1 ENSG00000275927.1 RP11-567P19.1 chr16 17445825 17446380 - sense_intronic NOVEL OTTHUMG00000186791.1 556 556 1 ENSG00000260945.1 RP11-916L7.1 chr16 17540331 17540985 - lincRNA NOVEL OTTHUMG00000177266.1 655 551 2 ENSG00000261555.1 CTD-3229J4.1 chr16 17825252 17826906 + lincRNA NOVEL OTTHUMG00000177267.1 1655 1655 1 ENSG00000228071.4 RPL7P47 chr16 17932720 17933275 + processed_pseudogene KNOWN OTTHUMG00000158115.2 556 556 1 ENSG00000259929.4 CTA-481E9.4 chr16 17933189 18151595 - lincRNA NOVEL OTTHUMG00000177258.1 218407 740 7 ENSG00000280283.1 CTA-481E9.2 chr16 17961597 17962370 + TEC KNOWN OTTHUMG00000176104.1 774 774 1 ENSG00000260242.1 CTA-481E9.3 chr16 18002806 18173063 - lincRNA NOVEL OTTHUMG00000177259.1 170258 691 2 ENSG00000260933.1 RP11-164A6.1 chr16 18170356 18170959 + processed_pseudogene KNOWN OTTHUMG00000177260.1 604 604 1 ENSG00000278994.1 CTD-2036A2.1 chr16 18201501 18201956 + TEC KNOWN OTTHUMG00000177261.1 456 456 1 ENSG00000174567.7 GOLT1A chr1 204198160 204214092 - protein_coding KNOWN OTTHUMG00000036056.1 15933 1136 7 ENSG00000281558.1 AC126755.3 chr16 18263636 18263756 - miRNA NOVEL NA 121 121 1 ENSG00000276484.1 RP11-1212A22.7 chr16 18313294 18316984 + unprocessed_pseudogene KNOWN OTTHUMG00000187886.1 3691 267 2 ENSG00000214940.7 NPIPA8 chr16 18317942 18336736 - protein_coding KNOWN OTTHUMG00000166284.2 18795 1606 23 ENSG00000205746.8 RP11-1212A22.1 chr16 18334400 18352476 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000166285.2 18077 6804 47 ENSG00000275085.1 AC126755.1 chr16 18339244 18339303 - miRNA NOVEL NA 60 60 1 ENSG00000273613.1 MIR6511A3 chr16 18344013 18344079 - miRNA KNOWN NA 67 67 1 ENSG00000277647.1 RP11-1212A22.8 chr16 18357026 18357136 + unprocessed_pseudogene KNOWN OTTHUMG00000187887.1 111 111 1 ENSG00000233024.6 RP11-1212A22.4 chr16 18358086 18379331 - protein_coding NOVEL OTTHUMG00000166286.2 21246 3030 58 ENSG00000254681.5 PKD1P5 chr16 18374521 18401940 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000166287.2 27420 10291 53 ENSG00000275391.1 MIR6770-2 chr16 18379351 18379410 - miRNA KNOWN NA 60 60 1 ENSG00000143850.11 PLEKHA6 chr1 204218851 204377665 - protein_coding KNOWN OTTHUMG00000036057.5 158815 7820 52 ENSG00000278675.1 AC126755.2 chr16 18383230 18383314 - miRNA NOVEL NA 85 85 1 ENSG00000206927.1 Y_RNA chr16 18397937 18398036 + misc_RNA NOVEL NA 100 100 1 ENSG00000257563.1 MIR3180-3 chr16 18402146 18403604 + lincRNA KNOWN OTTHUMG00000170522.1 1459 1459 1 ENSG00000266291.1 MIR3180-2 chr16 18402178 18402271 - miRNA KNOWN NA 94 94 1 ENSG00000265776.1 MIR3670-3 chr16 18405698 18405762 - miRNA KNOWN NA 65 65 1 ENSG00000257527.1 MIR3179-3 chr16 18411309 18411851 - lincRNA KNOWN OTTHUMG00000170523.1 543 543 1 ENSG00000266454.1 MIR3179-3 chr16 18411894 18411977 - miRNA KNOWN NA 84 84 1 ENSG00000185164.13 NOMO2 chr16 18417325 18562211 - protein_coding KNOWN OTTHUMG00000131366.2 144887 6801 221 ENSG00000274025.1 MIR3670-2 chr16 18488301 18488365 - miRNA KNOWN NA 65 65 1 ENSG00000277014.1 MIR3179-1 chr16 18494493 18494576 - miRNA KNOWN NA 84 84 1 ENSG00000231691.1 RP11-203F10.5 chr1 204277005 204277948 + antisense NOVEL OTTHUMG00000036058.1 944 446 2 ENSG00000262974.1 RP11-457I16.4 chr16 18533418 18533817 + processed_pseudogene KNOWN OTTHUMG00000177603.1 400 400 1 ENSG00000260550.2 RP11-457I16.2 chr16 18570448 18571683 - lincRNA NOVEL OTTHUMG00000177190.2 1236 699 3 ENSG00000256340.7 ABCC6P1 chr16 18571162 18598328 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000177192.2 27167 3431 27 ENSG00000281585.1 AC138811.1 chr16 18649699 18649825 + miRNA NOVEL NA 127 127 1 ENSG00000134419.14 RPS15A chr16 18781295 18790383 - protein_coding KNOWN OTTHUMG00000131365.6 9089 6679 54 ENSG00000260342.2 RP11-1035H13.3 chr16 18788063 18801519 - protein_coding PUTATIVE OTTHUMG00000177194.3 13457 764 7 ENSG00000170540.13 ARL6IP1 chr16 18791667 18801678 - protein_coding KNOWN OTTHUMG00000131367.4 10012 3666 34 ENSG00000260017.1 RP11-1035H13.2 chr16 18803083 18812181 + antisense NOVEL OTTHUMG00000177195.1 9099 361 2 ENSG00000157106.15 SMG1 chr16 18804853 18926454 - protein_coding KNOWN OTTHUMG00000166900.6 121602 25988 223 ENSG00000260352.1 CTD-2288F12.1 chr16 18926863 18937043 + antisense NOVEL OTTHUMG00000177196.1 10181 463 2 ENSG00000219133.2 RP11-203F10.6 chr1 204346776 204347258 - processed_pseudogene KNOWN OTTHUMG00000057669.2 483 483 1 ENSG00000265515.1 AC092287.1 chr16 18930196 18930282 - miRNA NOVEL NA 87 87 1 ENSG00000170537.11 TMC7 chr16 18983934 19063942 + protein_coding KNOWN OTTHUMG00000131456.4 80009 5638 60 ENSG00000207167.1 RNU6-1340P chr16 19012157 19012263 + snRNA KNOWN NA 107 107 1 ENSG00000261465.5 RP11-626G11.5 chr16 19062499 19067691 - antisense NOVEL OTTHUMG00000177197.2 5193 696 11 ENSG00000261357.1 RP11-626G11.1 chr16 19065991 19066694 + lincRNA NOVEL OTTHUMG00000176109.1 704 704 1 ENSG00000167186.9 COQ7 chr16 19067599 19080095 + protein_coding KNOWN OTTHUMG00000131455.4 12497 4120 50 ENSG00000260430.1 RP11-626G11.4 chr16 19086856 19098110 + lincRNA NOVEL OTTHUMG00000177198.1 11255 841 3 ENSG00000278389.1 RP11-626G11.6 chr16 19111035 19111484 - lincRNA NOVEL OTTHUMG00000186792.1 450 450 1 ENSG00000205730.6 ITPRIPL2 chr16 19113932 19121629 + protein_coding KNOWN OTTHUMG00000177199.3 7698 7440 3 ENSG00000261427.5 CTD-2349B8.1 chr16 19114002 19173578 + protein_coding KNOWN OTTHUMG00000177217.2 59577 908 11 ENSG00000232423.4 PRAMEF6 chr1 12938472 13056491 - protein_coding KNOWN OTTHUMG00000001984.2 118020 2170 12 ENSG00000280924.1 LINC00628 chr1 204368431 204369719 - lincRNA KNOWN OTTHUMG00000189537.1 1289 1289 1 ENSG00000261759.1 RP11-626G11.3 chr16 19119976 19121629 - antisense NOVEL OTTHUMG00000177200.1 1654 1137 2 ENSG00000103528.15 SYT17 chr16 19167971 19268334 + protein_coding KNOWN OTTHUMG00000131461.4 100364 7538 48 ENSG00000261210.4 CLEC19A chr16 19285739 19322145 + protein_coding KNOWN OTTHUMG00000177218.2 36407 1022 10 ENSG00000188477.11 AC003003.5 chr16 19285783 19310947 + sense_intronic NOVEL OTTHUMG00000131457.4 25165 2798 8 ENSG00000259871.1 CTA-363E6.1 chr16 19315164 19316526 + sense_intronic NOVEL OTTHUMG00000177219.1 1363 1363 1 ENSG00000259925.1 CTA-363E6.2 chr16 19343647 19401693 - lincRNA NOVEL OTTHUMG00000177221.2 58047 2278 7 ENSG00000280265.1 CTA-363E6.3 chr16 19392213 19393468 - TEC KNOWN OTTHUMG00000177222.1 1256 1256 1 ENSG00000103534.15 TMC5 chr16 19410496 19499113 + protein_coding KNOWN OTTHUMG00000131458.4 88618 6393 169 ENSG00000260681.1 CTA-363E6.5 chr16 19410729 19411662 - antisense NOVEL OTTHUMG00000177223.1 934 665 2 ENSG00000260592.1 CTA-363E6.6 chr16 19476916 19487899 - antisense NOVEL OTTHUMG00000177225.1 10984 633 3 ENSG00000226330.1 RP11-739N20.2 chr1 204377850 204435846 + antisense NOVEL OTTHUMG00000036103.1 57997 486 3 ENSG00000222750.1 RNU4-46P chr16 19498610 19498747 + snRNA KNOWN NA 138 138 1 ENSG00000006007.10 GDE1 chr16 19501689 19522145 - protein_coding KNOWN OTTHUMG00000131454.5 20457 4416 22 ENSG00000260934.1 CTA-363E6.7 chr16 19501689 19502286 + antisense NOVEL OTTHUMG00000177226.1 598 510 2 ENSG00000279747.1 CTA-363E6.8 chr16 19503861 19504625 + TEC KNOWN OTTHUMG00000184108.1 765 765 1 ENSG00000103540.15 CCP110 chr16 19523811 19553408 + protein_coding KNOWN OTTHUMG00000131459.4 29598 10142 65 ENSG00000103544.13 C16orf62 chr16 19555240 19706793 + protein_coding KNOWN OTTHUMG00000167925.9 151554 9767 269 ENSG00000276571.1 AC002550.6 chr16 19694035 19694428 - antisense NOVEL OTTHUMG00000186793.1 394 394 1 ENSG00000103550.12 KNOP1 chr16 19701934 19718235 - protein_coding KNOWN OTTHUMG00000177249.5 16302 7761 18 ENSG00000261312.1 AC002550.5 chr16 19706351 19715383 + antisense NOVEL OTTHUMG00000177250.1 9033 1379 2 ENSG00000174628.15 IQCK chr16 19716456 19858467 + protein_coding KNOWN OTTHUMG00000131453.5 142012 4993 87 ENSG00000237848.1 RP11-739N20.3 chr1 204394541 204394774 + processed_pseudogene KNOWN OTTHUMG00000036104.1 234 234 1 ENSG00000261195.1 CTD-2380F24.1 chr16 19761172 19766099 - antisense NOVEL OTTHUMG00000177256.1 4928 994 8 ENSG00000261939.1 LARP7P2 chr16 19819504 19819628 - processed_pseudogene KNOWN OTTHUMG00000177625.1 125 125 1 ENSG00000167191.10 GPRC5B chr16 19856691 19886167 - protein_coding KNOWN OTTHUMG00000131460.3 29477 6667 34 ENSG00000265524.1 AC134300.1 chr16 19890501 19890597 + miRNA NOVEL NA 97 97 1 ENSG00000180269.7 GPR139 chr16 20031485 20073917 - protein_coding KNOWN OTTHUMG00000177690.1 42433 1712 5 ENSG00000277211.1 RP11-204E4.4 chr16 20155648 20158391 + processed_pseudogene KNOWN OTTHUMG00000187889.1 2744 2744 1 ENSG00000263253.1 RP11-204E4.3 chr16 20208925 20209525 + lincRNA NOVEL OTTHUMG00000177691.1 601 352 2 ENSG00000227624.2 SNRPEP3 chr16 20238972 20239247 - processed_pseudogene KNOWN OTTHUMG00000177692.1 276 276 1 ENSG00000169347.15 GP2 chr16 20309572 20327808 - protein_coding KNOWN OTTHUMG00000131489.2 18237 4048 72 ENSG00000169344.14 UMOD chr16 20333052 20356301 - protein_coding KNOWN OTTHUMG00000131488.3 23250 3409 77 ENSG00000158615.8 PPP1R15B chr1 204403387 204411791 - protein_coding KNOWN OTTHUMG00000036105.3 8405 5227 2 ENSG00000169340.8 PDILT chr16 20359170 20404737 - protein_coding KNOWN OTTHUMG00000131487.2 45568 2276 16 ENSG00000263237.1 RP11-429K17.1 chr16 20385957 20391164 + antisense NOVEL OTTHUMG00000177421.1 5208 615 2 ENSG00000183549.9 ACSM5 chr16 20409534 20441336 + protein_coding KNOWN OTTHUMG00000131551.3 31803 3963 37 ENSG00000262995.1 CTD-2194A8.2 chr16 20440266 20447000 - antisense NOVEL OTTHUMG00000177693.1 6735 1069 6 ENSG00000183747.10 ACSM2A chr16 20451461 20487667 + protein_coding KNOWN OTTHUMG00000177401.3 36207 8193 131 ENSG00000280306.1 CTD-3076M17.1 chr16 20487702 20489659 + TEC KNOWN OTTHUMG00000177402.1 1958 1958 1 ENSG00000066813.13 ACSM2B chr16 20536226 20576427 - protein_coding KNOWN OTTHUMG00000131555.3 40202 8158 146 ENSG00000260201.2 RP11-143N13.2 chr16 20580999 20586640 + lincRNA NOVEL OTTHUMG00000177227.3 5642 642 6 ENSG00000260762.1 ACSM5P1 chr16 20586550 20607107 - unprocessed_pseudogene KNOWN OTTHUMG00000177228.1 20558 2438 12 ENSG00000005187.10 ACSM3 chr16 20610243 20797581 + protein_coding KNOWN OTTHUMG00000131552.4 187339 7822 87 ENSG00000133056.12 PIK3C2B chr1 204422628 204494724 - protein_coding KNOWN OTTHUMG00000036101.2 72097 9414 83 ENSG00000275315.1 RP11-143N13.4 chr16 20616409 20616532 - unprocessed_pseudogene KNOWN OTTHUMG00000187891.1 124 124 1 ENSG00000274730.1 RP11-143N13.3 chr16 20618205 20620758 - unprocessed_pseudogene KNOWN OTTHUMG00000187892.1 2554 130 2 ENSG00000166743.8 ACSM1 chr16 20623237 20698890 - protein_coding KNOWN OTTHUMG00000131550.2 75654 2871 61 ENSG00000066654.11 THUMPD1 chr16 20733664 20742084 - protein_coding KNOWN OTTHUMG00000131558.2 8421 5092 18 ENSG00000260510.1 AC004381.7 chr16 20743663 20766620 - antisense NOVEL OTTHUMG00000177229.1 22958 351 3 ENSG00000196678.12 ERI2 chr16 20780193 20900349 - protein_coding KNOWN OTTHUMG00000131557.4 120157 6761 88 ENSG00000200893.1 RNU6-944P chr16 20784509 20784615 + snRNA KNOWN NA 107 107 1 ENSG00000005189.18 AC004381.6 chr16 20806429 20849668 + protein_coding NOVEL OTTHUMG00000131556.4 43240 4114 165 ENSG00000275908.1 U4atac chr16 20823443 20823537 + snRNA NOVEL NA 95 95 1 ENSG00000188215.8 DCUN1D3 chr16 20854925 20900384 - protein_coding KNOWN OTTHUMG00000131553.3 45460 6248 6 ENSG00000198625.11 MDM4 chr1 204516379 204558120 + protein_coding KNOWN OTTHUMG00000035877.3 41742 11008 120 ENSG00000102897.8 LYRM1 chr16 20899868 20925006 + protein_coding KNOWN OTTHUMG00000131554.2 25139 3593 48 ENSG00000158486.12 DNAH3 chr16 20933111 21159441 - protein_coding KNOWN OTTHUMG00000090677.3 226331 14960 115 ENSG00000263331.1 CTC-508F8.1 chr16 21120758 21130108 + antisense NOVEL OTTHUMG00000177369.1 9351 405 3 ENSG00000011638.9 TMEM159 chr16 21158377 21180616 + protein_coding KNOWN OTTHUMG00000131559.2 22240 2558 45 ENSG00000262983.1 AF001550.7 chr16 21194847 21205977 + antisense NOVEL OTTHUMG00000177370.1 11131 573 4 ENSG00000103310.9 ZP2 chr16 21197450 21214510 - protein_coding KNOWN OTTHUMG00000090681.3 17061 3453 56 ENSG00000175311.6 ANKS4B chr16 21233665 21253845 + protein_coding KNOWN OTTHUMG00000177371.2 20181 4352 2 ENSG00000103316.9 CRYM chr16 21238874 21303083 - protein_coding KNOWN OTTHUMG00000090707.2 64210 3782 57 ENSG00000189149.10 CRYM-AS1 chr16 21300849 21318591 + lincRNA KNOWN OTTHUMG00000156701.2 17743 2515 9 ENSG00000257403.2 CTD-2547E10.3 chr16 21347139 21352138 + unprocessed_pseudogene KNOWN OTTHUMG00000170413.2 5000 255 3 ENSG00000236779.1 RP11-430C7.2 chr1 204528845 204529692 - processed_pseudogene KNOWN OTTHUMG00000035988.1 848 848 1 ENSG00000158482.9 SNX29P1 chr16 21380173 21386064 + unprocessed_pseudogene KNOWN OTTHUMG00000170414.1 5892 797 3 ENSG00000276548.1 CTD-2547E10.5 chr16 21401089 21401198 + unprocessed_pseudogene KNOWN OTTHUMG00000187893.1 110 110 1 ENSG00000169246.15 NPIPB3 chr16 21402237 21448567 - protein_coding KNOWN OTTHUMG00000163506.4 46331 4717 68 ENSG00000276555.1 AC008740.1 chr16 21444108 21444216 - miRNA NOVEL NA 109 109 1 ENSG00000180747.14 SMG1P3 chr16 21446683 21520444 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000164329.2 73762 7107 74 ENSG00000265462.1 MIR3680-2 chr16 21506049 21506135 - miRNA KNOWN NA 87 87 1 ENSG00000258186.2 SLC7A5P2 chr16 21519830 21520365 - transcribed_processed_pseudogene KNOWN OTTHUMG00000170388.2 536 536 1 ENSG00000273956.1 CTB-31N19.5 chr16 21526824 21531141 - lincRNA NOVEL OTTHUMG00000186796.1 4318 431 2 ENSG00000257639.1 CTB-31N19.2 chr16 21532945 21550373 - unprocessed_pseudogene KNOWN OTTHUMG00000170415.1 17429 576 5 ENSG00000271609.1 CTB-31N19.4 chr16 21538487 21538794 + processed_pseudogene KNOWN OTTHUMG00000184812.1 308 308 1 ENSG00000200408.1 RNA5SP74 chr1 204562413 204562521 - rRNA KNOWN NA 109 109 1 ENSG00000252798.1 SCARNA6 chr16 21587627 21587864 + scaRNA NOVEL NA 238 238 1 ENSG00000197006.12 METTL9 chr16 21597218 21657473 + protein_coding KNOWN OTTHUMG00000131584.2 60256 7035 39 ENSG00000261596.2 CTB-31N19.3 chr16 21626742 21627569 + sense_intronic NOVEL OTTHUMG00000175456.2 828 828 1 ENSG00000140749.8 IGSF6 chr16 21639537 21652660 - protein_coding KNOWN OTTHUMG00000090709.3 13124 3532 11 ENSG00000207248.1 RNU6-1005P chr16 21642054 21642160 + snRNA KNOWN NA 107 107 1 ENSG00000207042.1 RNU6-196P chr16 21642294 21642400 + snRNA KNOWN NA 107 107 1 ENSG00000155719.15 OTOA chr16 21678514 21760729 + protein_coding KNOWN OTTHUMG00000090721.3 82216 7209 130 ENSG00000260306.1 RP11-645C24.5 chr16 21794095 21795759 - lincRNA NOVEL OTTHUMG00000175457.1 1665 1665 1 ENSG00000248124.6 RRN3P1 chr16 21796106 21820410 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000170417.2 24305 5253 33 ENSG00000276721.1 RP11-645C24.6 chr16 21833516 21833621 + unprocessed_pseudogene KNOWN OTTHUMG00000187894.1 106 106 1 ENSG00000240710.1 RP11-430C7.4 chr1 204603035 204616565 + antisense NOVEL OTTHUMG00000037031.1 13531 683 3 ENSG00000185864.15 NPIPB4 chr16 21834569 21880827 - protein_coding KNOWN OTTHUMG00000163555.5 46259 7773 98 ENSG00000275727.1 AC092375.1 chr16 21876370 21876478 - miRNA NOVEL NA 109 109 1 ENSG00000185710.8 SMG1P4 chr16 21879338 21919156 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000164330.2 39819 6290 58 ENSG00000257408.1 RP11-645C24.4 chr16 21938865 21945130 + unprocessed_pseudogene KNOWN OTTHUMG00000170418.1 6266 813 4 ENSG00000274460.1 CTD-2649C14.2 chr16 21950218 21951708 - processed_transcript NOVEL OTTHUMG00000186800.1 1491 1491 1 ENSG00000140740.9 UQCRC2 chr16 21952660 21983660 + protein_coding KNOWN OTTHUMG00000131585.3 31001 5217 86 ENSG00000155714.12 PDZD9 chr16 21983865 22001110 - protein_coding KNOWN OTTHUMG00000131586.3 17246 1331 12 ENSG00000260395.1 CTD-2649C14.1 chr16 21998310 21999656 + processed_pseudogene KNOWN OTTHUMG00000175458.1 1347 934 2 ENSG00000275445.1 CTD-2649C14.3 chr16 22007480 22008062 - antisense NOVEL OTTHUMG00000186802.1 583 583 1 ENSG00000185716.10 C16orf52 chr16 22007638 22087534 + protein_coding KNOWN OTTHUMG00000131587.3 79897 6122 26 ENSG00000170382.10 LRRN2 chr1 204617170 204685733 - protein_coding KNOWN OTTHUMG00000035989.2 68564 5681 9 ENSG00000260277.1 RP11-101E7.2 chr16 22083256 22092231 - antisense NOVEL OTTHUMG00000175460.1 8976 1154 7 ENSG00000175267.13 VWA3A chr16 22092538 22156966 + protein_coding KNOWN OTTHUMG00000175461.1 64429 5039 123 ENSG00000183921.7 SDR42E2 chr16 22165583 22191754 + protein_coding KNOWN OTTHUMG00000183976.2 26172 2630 12 ENSG00000103319.10 EEF2K chr16 22206282 22288732 + protein_coding KNOWN OTTHUMG00000094771.3 82451 8020 37 ENSG00000261113.1 RP11-141O15.1 chr16 22286708 22288738 - antisense NOVEL OTTHUMG00000175462.1 2031 714 6 ENSG00000058600.14 POLR3E chr16 22297375 22335103 + protein_coding KNOWN OTTHUMG00000094779.2 37729 9488 207 ENSG00000140743.6 CDR2 chr16 22345936 22437165 - protein_coding KNOWN OTTHUMG00000175463.1 91230 3948 33 ENSG00000260635.1 RP11-21M24.3 chr16 22365121 22369047 + antisense NOVEL OTTHUMG00000175464.1 3927 423 3 ENSG00000260790.1 RP11-21M24.2 chr16 22374859 22378180 + antisense NOVEL OTTHUMG00000175465.1 3322 1455 4 ENSG00000230872.1 AC092338.5 chr16 22382436 22407428 + unitary_pseudogene KNOWN OTTHUMG00000154703.1 24993 1290 5 ENSG00000274178.2 CH17-409J4.2 chr1 13029339 13032130 + unprocessed_pseudogene KNOWN OTTHUMG00000189309.1 2792 1450 3 ENSG00000240219.1 RP11-430C7.5 chr1 204626775 204629712 + lincRNA NOVEL OTTHUMG00000040691.1 2938 2219 2 ENSG00000257122.4 RRN3P3 chr16 22418672 22437715 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000170419.2 19044 3366 11 ENSG00000237296.8 SMG1P1 chr16 22437008 22492220 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156797.2 55213 7046 78 ENSG00000243716.9 NPIPB5 chr16 22479121 22536521 + protein_coding KNOWN OTTHUMG00000163573.5 57401 10005 157 ENSG00000276305.1 AC106788.1 chr16 22494687 22494795 + miRNA NOVEL NA 109 109 1 ENSG00000277041.1 RP11-368J21.4 chr16 22537478 22537584 - unprocessed_pseudogene KNOWN OTTHUMG00000187895.1 107 107 1 ENSG00000257838.4 RP11-368J21.3 chr16 22545698 22576865 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000170420.1 31168 2661 18 ENSG00000260973.1 RP11-105C19.2 chr16 22610531 22612196 - lincRNA NOVEL OTTHUMG00000176839.1 1666 1666 1 ENSG00000260905.1 RP11-105C19.1 chr16 22612543 22613483 - lincRNA NOVEL OTTHUMG00000176840.1 941 375 2 ENSG00000122254.6 HS3ST2 chr16 22814177 22916338 + protein_coding KNOWN OTTHUMG00000094785.2 102162 2605 6 ENSG00000261090.1 RP11-20G6.2 chr16 23020337 23023611 + lincRNA NOVEL OTTHUMG00000177262.1 3275 932 2 ENSG00000228153.1 RP11-23I7.1 chr1 204663872 204664613 + lincRNA NOVEL OTTHUMG00000037030.1 742 445 2 ENSG00000103404.13 USP31 chr16 23061406 23149270 - protein_coding KNOWN OTTHUMG00000094793.6 87865 12017 23 ENSG00000260566.2 RP11-20G6.3 chr16 23061406 23064173 - 3prime_overlapping_ncrna NOVEL OTTHUMG00000177263.2 2768 2768 1 ENSG00000280400.1 RP11-20G6.1 chr16 23061767 23062232 + TEC KNOWN OTTHUMG00000176841.1 466 466 1 ENSG00000166828.2 SCNN1G chr16 23182715 23216883 + protein_coding KNOWN OTTHUMG00000131609.1 34169 3507 13 ENSG00000260741.1 CTC-391G2.1 chr16 23194878 23213104 - antisense NOVEL OTTHUMG00000177037.1 18227 481 4 ENSG00000168447.9 SCNN1B chr16 23278231 23381299 + protein_coding KNOWN OTTHUMG00000131608.6 103069 3918 73 ENSG00000168434.11 COG7 chr16 23388493 23453180 - protein_coding KNOWN OTTHUMG00000094807.3 64688 4343 34 ENSG00000280039.1 CTD-2270L9.3 chr16 23412380 23416680 + TEC KNOWN OTTHUMG00000177015.2 4301 4301 1 ENSG00000212593.1 SNORA75 chr16 23441841 23441921 + snoRNA NOVEL NA 81 81 1 ENSG00000259782.2 CTD-2270L9.2 chr16 23446446 23447282 - sense_intronic NOVEL OTTHUMG00000177013.2 837 837 1 ENSG00000252650.1 RNA5SP75 chr1 204707320 204707430 - rRNA KNOWN NA 111 111 1 ENSG00000260136.4 CTD-2270L9.4 chr16 23452758 23457606 + lincRNA NOVEL OTTHUMG00000177094.1 4849 1007 7 ENSG00000103365.14 GGA2 chr16 23463542 23521995 - protein_coding KNOWN OTTHUMG00000096957.4 58454 8231 84 ENSG00000261528.2 AC002400.1 chr16 23500905 23501630 + processed_pseudogene KNOWN OTTHUMG00000177017.2 726 726 1 ENSG00000103356.14 EARS2 chr16 23522014 23557731 - protein_coding KNOWN OTTHUMG00000177018.3 35718 5730 81 ENSG00000260247.1 SUB1P4 chr16 23537061 23537556 + processed_pseudogene KNOWN OTTHUMG00000177019.1 496 339 2 ENSG00000103353.14 UBFD1 chr16 23557362 23574389 + protein_coding KNOWN OTTHUMG00000128855.5 17028 8619 42 ENSG00000260751.2 CTD-2196E14.6 chr16 23568673 23569696 + sense_intronic NOVEL OTTHUMG00000177095.2 1024 1024 1 ENSG00000279618.1 CTD-2196E14.7 chr16 23571854 23572278 - TEC KNOWN OTTHUMG00000177096.2 425 425 1 ENSG00000004779.8 NDUFAB1 chr16 23581002 23596356 - protein_coding KNOWN OTTHUMG00000096985.4 15355 1600 23 ENSG00000083093.8 PALB2 chr16 23603160 23641310 - protein_coding KNOWN OTTHUMG00000177097.4 38151 4747 42 ENSG00000251861.1 SCARNA20 chr1 204727991 204728106 + scaRNA NOVEL NA 116 116 1 ENSG00000261723.1 CTD-2196E14.3 chr16 23605841 23624107 + antisense NOVEL OTTHUMG00000177098.1 18267 627 4 ENSG00000166847.8 DCTN5 chr16 23641392 23677455 + protein_coding KNOWN OTTHUMG00000131610.5 36064 12740 36 ENSG00000260482.3 CTD-2196E14.9 chr16 23670011 23675499 + 3prime_overlapping_ncrna NOVEL OTTHUMG00000189504.1 5489 3315 4 ENSG00000166851.13 PLK1 chr16 23677656 23690367 + protein_coding KNOWN OTTHUMG00000096984.4 12712 4760 43 ENSG00000261266.2 CTD-2196E14.5 chr16 23687049 23687689 - antisense NOVEL OTTHUMG00000177100.2 641 641 1 ENSG00000134398.11 ERN2 chr16 23690326 23713500 - protein_coding KNOWN OTTHUMG00000177020.4 23175 4998 73 ENSG00000278912.1 CTD-2196E14.8 chr16 23696665 23697314 - TEC KNOWN OTTHUMG00000177101.1 650 650 1 ENSG00000261583.1 CTD-2385L22.1 chr16 23711990 23712793 + antisense NOVEL OTTHUMG00000177021.1 804 534 2 ENSG00000279756.1 CTD-2385L22.2 chr16 23753689 23755939 - TEC KNOWN OTTHUMG00000177102.1 2251 2251 1 ENSG00000166869.2 CHP2 chr16 23754627 23758951 + protein_coding KNOWN OTTHUMG00000131611.1 4325 2382 7 ENSG00000163531.14 NFASC chr1 204828651 205022822 + protein_coding KNOWN OTTHUMG00000151697.2 194172 21271 390 ENSG00000166501.11 PRKCB chr16 23836001 24220611 + protein_coding KNOWN OTTHUMG00000131615.4 384611 10037 59 ENSG00000279276.1 CTA-345G4.1 chr16 23962951 23963351 + TEC KNOWN OTTHUMG00000177440.1 401 401 1 ENSG00000279202.1 CTA-113A6.1 chr16 24098239 24099971 + TEC KNOWN OTTHUMG00000177268.1 1733 1733 1 ENSG00000274466.1 MIR1273H chr16 24203116 24203231 + miRNA KNOWN NA 116 116 1 ENSG00000279554.1 CTA-113A6.2 chr16 24208105 24208478 + TEC KNOWN OTTHUMG00000177269.1 374 374 1 ENSG00000260264.1 AC004125.3 chr16 24236104 24252863 + lincRNA NOVEL OTTHUMG00000177234.1 16760 960 6 ENSG00000006116.3 CACNG3 chr16 24255553 24362801 + protein_coding KNOWN OTTHUMG00000131651.1 107249 3088 4 ENSG00000201541.1 SNORA1 chr16 24333415 24333547 - snoRNA NOVEL NA 133 133 1 ENSG00000239081.1 RNU7-24P chr16 24400056 24400117 - snRNA KNOWN NA 62 62 1 ENSG00000264465.1 AC008938.1 chr16 24438988 24439087 + miRNA NOVEL NA 100 100 1 ENSG00000229657.2 RP11-494K3.2 chr1 204946608 204947169 + processed_pseudogene KNOWN OTTHUMG00000059191.2 562 562 1 ENSG00000260072.1 CTD-2313J23.1 chr16 24472798 24495177 - lincRNA NOVEL OTTHUMG00000177235.1 22380 6510 2 ENSG00000122257.17 RBBP6 chr16 24537693 24572863 + protein_coding KNOWN OTTHUMG00000096991.8 35171 10217 107 ENSG00000259888.1 CTD-2540M10.1 chr16 24610266 24640957 + lincRNA NOVEL OTTHUMG00000177236.1 30692 293 2 ENSG00000224310.1 LINC01567 chr16 24661422 24671062 - lincRNA NOVEL OTTHUMG00000131650.3 9641 2907 3 ENSG00000090905.16 TNRC6A chr16 24729695 24827632 + protein_coding KNOWN OTTHUMG00000096999.10 97938 12522 142 ENSG00000261669.1 CTD-2515A14.1 chr16 24803451 24819739 - antisense NOVEL OTTHUMG00000177118.1 16289 579 2 ENSG00000158865.11 SLC5A11 chr16 24845841 24911628 + protein_coding KNOWN OTTHUMG00000097003.7 65788 3415 150 ENSG00000140750.15 ARHGAP17 chr16 24919385 25015666 - protein_coding KNOWN OTTHUMG00000177372.9 96282 9879 133 ENSG00000260714.1 RP11-266L9.1 chr16 25015978 25021023 + processed_pseudogene KNOWN OTTHUMG00000177119.1 5046 4007 3 ENSG00000281675.1 AC133552.1 chr16 25022528 25022625 - miRNA NOVEL NA 98 98 1 ENSG00000184144.8 CNTN2 chr1 205043197 205078499 + protein_coding KNOWN OTTHUMG00000037105.4 35303 10074 56 ENSG00000262587.2 RP11-266L9.4 chr16 25031744 25058109 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000177403.2 26366 1126 3 ENSG00000262155.1 RP11-266L9.5 chr16 25066937 25068943 + lincRNA NOVEL OTTHUMG00000177404.1 2007 1875 2 ENSG00000271105.1 SCML2P2 chr16 25069570 25070109 + processed_pseudogene KNOWN OTTHUMG00000184811.1 540 540 1 ENSG00000263326.1 RP11-266L9.6 chr16 25071490 25072727 - unprocessed_pseudogene KNOWN OTTHUMG00000177407.1 1238 676 2 ENSG00000260448.4 LCMT1-AS1 chr16 25085592 25111555 - lincRNA NOVEL OTTHUMG00000177185.1 25964 1168 10 ENSG00000262700.1 RP11-266L9.3 chr16 25093387 25095255 + processed_pseudogene KNOWN OTTHUMG00000177405.1 1869 1869 1 ENSG00000275494.1 RP11-266L9.8 chr16 25106569 25107102 - sense_intronic NOVEL OTTHUMG00000186826.1 534 534 1 ENSG00000205629.10 LCMT1 chr16 25111729 25178231 + protein_coding KNOWN OTTHUMG00000177182.4 66503 2606 77 ENSG00000260034.1 LCMT1-AS2 chr16 25140577 25149032 - antisense NOVEL OTTHUMG00000177183.1 8456 7990 4 ENSG00000266166.2 RN7SL557P chr16 25185253 25185538 - misc_RNA KNOWN NA 286 286 1 ENSG00000251696.1 AL583832.1 chr1 205062252 205062342 + miRNA NOVEL NA 91 91 1 ENSG00000103375.9 AQP8 chr16 25215731 25228940 + protein_coding KNOWN OTTHUMG00000097013.2 13210 1421 12 ENSG00000155592.14 ZKSCAN2 chr16 25236001 25257931 - protein_coding KNOWN OTTHUMG00000177180.1 21931 7970 19 ENSG00000259955.1 CTD-2547G23.2 chr16 25238318 25239287 + antisense NOVEL OTTHUMG00000177181.1 970 510 2 ENSG00000274925.1 CTD-2547G23.4 chr16 25257952 25261066 + lincRNA NOVEL OTTHUMG00000186827.1 3115 3115 1 ENSG00000261636.1 CTA-249B10.1 chr16 25419814 25424169 - lincRNA NOVEL OTTHUMG00000177070.1 4356 518 2 ENSG00000260690.1 CYCSP39 chr16 25454339 25454647 - processed_pseudogene KNOWN OTTHUMG00000177071.1 309 309 1 ENSG00000182601.6 HS3ST4 chr16 25692026 26137688 + protein_coding KNOWN OTTHUMG00000059978.3 445663 3379 4 ENSG00000260255.1 RP11-185O21.1 chr16 25824710 25826330 - processed_pseudogene KNOWN OTTHUMG00000177072.1 1621 1094 2 ENSG00000265005.1 MIR548W chr16 26025237 26025310 + miRNA KNOWN NA 74 74 1 ENSG00000199929.1 RNA5SP405 chr16 26028912 26029025 + rRNA KNOWN NA 114 114 1 ENSG00000174529.7 TMEM81 chr1 205083129 205084460 - protein_coding KNOWN OTTHUMG00000037103.1 1332 1332 1 ENSG00000230330.1 HMGN2P3 chr16 26032539 26032811 - processed_pseudogene KNOWN OTTHUMG00000059918.1 273 273 1 ENSG00000237140.2 HSPE1P16 chr16 26062750 26063097 - processed_pseudogene KNOWN OTTHUMG00000059950.2 348 348 1 ENSG00000231876.6 AC009158.1 chr16 26302064 26334428 + lincRNA NOVEL OTTHUMG00000060108.6 32365 1715 18 ENSG00000228480.1 AC130464.1 chr16 26354796 26358355 - unprocessed_pseudogene KNOWN OTTHUMG00000102175.1 3560 1500 6 ENSG00000281090.1 AC008756.1 chr16 26547024 26547119 - miRNA NOVEL NA 96 96 1 ENSG00000236481.1 AC002331.1 chr16 26584755 26594813 - lincRNA NOVEL OTTHUMG00000060136.1 10059 294 2 ENSG00000260580.1 RP11-142A12.1 chr16 26721874 26729126 + lincRNA NOVEL OTTHUMG00000177033.1 7253 717 2 ENSG00000264935.1 AC009035.1 chr16 26736229 26736317 + miRNA NOVEL NA 89 89 1 ENSG00000234186.2 C16orf82 chr16 27066707 27069165 + lincRNA KNOWN OTTHUMG00000161986.1 2459 2459 2 ENSG00000261482.1 RP11-673P17.2 chr16 27066928 27067858 - antisense NOVEL OTTHUMG00000177034.1 931 499 2 ENSG00000117222.12 RBBP5 chr1 205086142 205122015 - protein_coding KNOWN OTTHUMG00000037104.1 35874 4404 31 ENSG00000261557.1 EEF1A1P38 chr16 27133483 27135179 - processed_pseudogene KNOWN OTTHUMG00000177035.1 1697 1389 2 ENSG00000261045.2 RP11-673P17.4 chr16 27158451 27176587 - lincRNA NOVEL OTTHUMG00000177036.2 18137 692 4 ENSG00000155666.10 KDM8 chr16 27203495 27221768 + protein_coding KNOWN OTTHUMG00000131677.6 18274 4039 55 ENSG00000259940.2 CTD-3203P2.1 chr16 27213308 27214993 - antisense NOVEL OTTHUMG00000177038.2 1686 1686 1 ENSG00000169189.15 NSMCE1 chr16 27224991 27268794 - protein_coding KNOWN OTTHUMG00000131674.6 43804 3770 73 ENSG00000245888.5 FLJ21408 chr16 27268205 27290492 + antisense NOVEL OTTHUMG00000177039.1 22288 3266 13 ENSG00000274092.1 CTD-3203P2.3 chr16 27313387 27314101 - antisense NOVEL OTTHUMG00000186828.1 715 715 1 ENSG00000077238.12 IL4R chr16 27313668 27364778 + protein_coding KNOWN OTTHUMG00000097015.9 51111 5894 105 ENSG00000103522.14 IL21R chr16 27402162 27452042 + protein_coding KNOWN OTTHUMG00000131675.5 49881 5467 35 ENSG00000259954.1 IL21R-AS1 chr16 27447669 27453393 - antisense NOVEL OTTHUMG00000176806.1 5725 2615 3 ENSG00000274764.3 WI2-3308P17.2 chr1 13049476 13155947 - protein_coding PUTATIVE OTTHUMG00000074727.3 106472 1927 8 ENSG00000271580.1 RP11-536L3.4 chr1 205091163 205091946 + processed_pseudogene KNOWN OTTHUMG00000184465.1 784 784 1 ENSG00000077235.16 GTF3C1 chr16 27459555 27549913 - protein_coding KNOWN OTTHUMG00000176805.7 90359 11562 117 ENSG00000047578.11 KIAA0556 chr16 27550133 27780369 + protein_coding KNOWN OTTHUMG00000176780.5 230237 9784 76 ENSG00000261736.1 AC002551.1 chr16 27643199 27644663 + sense_intronic NOVEL OTTHUMG00000176781.1 1465 592 2 ENSG00000221528.1 AC016597.1 chr16 27661900 27662018 + miRNA NOVEL NA 119 119 1 ENSG00000261329.4 CTD-2049O4.1 chr16 27678940 27718806 - antisense NOVEL OTTHUMG00000176807.2 39867 1456 12 ENSG00000273553.1 CTD-2049O4.2 chr16 27687182 27687522 + sense_intronic NOVEL OTTHUMG00000186830.1 341 341 1 ENSG00000201371.1 Y_RNA chr16 27722284 27722392 - misc_RNA NOVEL NA 109 109 1 ENSG00000169181.11 GSG1L chr16 27787535 28063509 - protein_coding KNOWN OTTHUMG00000131676.4 275975 5213 32 ENSG00000212382.1 RNU6-159P chr16 27863251 27863356 + snRNA KNOWN NA 106 106 1 ENSG00000207266.1 RNU6-1241P chr16 27998295 27998401 - snRNA KNOWN NA 107 107 1 ENSG00000236108.1 RP11-383G10.1 chr1 205134646 205134950 + processed_pseudogene KNOWN OTTHUMG00000037100.1 305 305 1 ENSG00000169180.10 XPO6 chr16 28097979 28211920 - protein_coding KNOWN OTTHUMG00000176782.8 113942 7065 131 ENSG00000260452.1 TPRKBP2 chr16 28111173 28111647 - processed_pseudogene KNOWN OTTHUMG00000176815.1 475 475 1 ENSG00000281854.1 AC136611.1 chr16 28179091 28179164 + miRNA NOVEL NA 74 74 1 ENSG00000200652.1 SNORA25 chr16 28179098 28179223 + snoRNA NOVEL NA 126 126 1 ENSG00000200138.1 RNY1P10 chr16 28183318 28183430 + misc_RNA KNOWN NA 113 113 1 ENSG00000250982.2 RP11-159J3.1 chr16 28239693 28240668 - processed_pseudogene KNOWN OTTHUMG00000160047.2 976 976 1 ENSG00000246465.1 RP11-57A19.2 chr16 28284885 28292064 - lincRNA NOVEL OTTHUMG00000166065.1 7180 2481 2 ENSG00000188322.4 SBK1 chr16 28292519 28323849 + protein_coding KNOWN OTTHUMG00000166066.1 31331 4992 4 ENSG00000277191.1 RP11-57A19.6 chr16 28341437 28341543 + unprocessed_pseudogene KNOWN OTTHUMG00000187896.1 107 107 1 ENSG00000198156.9 NPIPB6 chr16 28342555 28363508 - protein_coding KNOWN OTTHUMG00000166319.2 20954 2135 14 ENSG00000133059.15 DSTYK chr1 205142505 205211566 - protein_coding KNOWN OTTHUMG00000037102.3 69062 8339 31 ENSG00000271623.1 RP11-435I10.5 chr16 28364700 28365333 + processed_pseudogene KNOWN OTTHUMG00000184808.1 634 634 1 ENSG00000205609.11 EIF3CL chr16 28379579 28403879 - protein_coding KNOWN OTTHUMG00000097025.1 24301 3091 42 ENSG00000275429.1 MIR6862-2 chr16 28390982 28391051 - miRNA KNOWN NA 70 70 1 ENSG00000261089.1 RP11-435I10.3 chr16 28413703 28415018 + processed_pseudogene KNOWN OTTHUMG00000175736.1 1316 1029 2 ENSG00000275654.1 RP11-435I10.6 chr16 28451644 28455356 + unprocessed_pseudogene KNOWN OTTHUMG00000187897.1 3713 256 2 ENSG00000270118.1 RP11-57A19.5 chr16 28454141 28454511 - lincRNA NOVEL OTTHUMG00000184080.1 371 371 1 ENSG00000233232.5 NPIPB7 chr16 28456372 28471175 - protein_coding KNOWN OTTHUMG00000156915.2 14804 1493 14 ENSG00000261832.3 CLN3 chr16 28466653 28492012 - protein_coding NOVEL OTTHUMG00000175737.1 25360 1721 28 ENSG00000188603.15 CLN3 chr16 28477279 28495575 - protein_coding KNOWN OTTHUMG00000097024.2 18297 4495 392 ENSG00000184730.9 APOBR chr16 28494649 28498970 + protein_coding KNOWN OTTHUMG00000172705.1 4322 3792 9 ENSG00000213041.4 RP11-383G10.3 chr1 205202191 205202742 + processed_pseudogene KNOWN OTTHUMG00000037194.2 552 552 1 ENSG00000197272.2 IL27 chr16 28499362 28512051 - protein_coding KNOWN OTTHUMG00000097023.2 12690 1270 9 ENSG00000176046.8 NUPR1 chr16 28532708 28539174 - protein_coding KNOWN OTTHUMG00000131764.3 6467 5674 10 ENSG00000271495.1 RP11-666O2.1 chr16 28548331 28548658 - processed_pseudogene KNOWN OTTHUMG00000184822.1 328 328 1 ENSG00000275441.1 RP11-666O2.2 chr16 28553709 28554140 - antisense NOVEL OTTHUMG00000186839.1 432 432 1 ENSG00000176476.7 CCDC101 chr16 28553915 28591790 + protein_coding KNOWN OTTHUMG00000131763.2 37876 2124 36 ENSG00000197165.9 SULT1A2 chr16 28591943 28597109 - protein_coding KNOWN OTTHUMG00000048082.3 5167 2275 32 ENSG00000278665.1 RP11-666O2.4 chr16 28599241 28601881 - unprocessed_pseudogene KNOWN OTTHUMG00000187898.1 2641 740 4 ENSG00000278725.1 RP11-666O2.5 chr16 28602340 28604519 + unprocessed_pseudogene KNOWN OTTHUMG00000187959.1 2180 400 3 ENSG00000196502.10 SULT1A1 chr16 28605196 28623625 - protein_coding KNOWN OTTHUMG00000131765.3 18430 8909 87 ENSG00000255524.6 NPIPB8 chr16 28637654 28658682 + protein_coding KNOWN OTTHUMG00000166386.2 21029 2338 10 ENSG00000133069.13 TMCC2 chr1 205228176 205273343 + protein_coding KNOWN OTTHUMG00000037195.1 45168 4922 33 ENSG00000261419.1 RP11-57A19.4 chr16 28659696 28740781 - unprocessed_pseudogene KNOWN OTTHUMG00000175738.1 81086 361 3 ENSG00000184110.13 EIF3C chr16 28688558 28735730 + protein_coding KNOWN OTTHUMG00000099443.3 47173 6982 146 ENSG00000259982.1 CDC37P1 chr16 28700294 28701540 - processed_pseudogene KNOWN OTTHUMG00000175739.1 1247 959 2 ENSG00000278340.1 MIR6862-1 chr16 28724252 28724321 + miRNA KNOWN NA 70 70 1 ENSG00000270424.1 RP11-1348G14.6 chr16 28749959 28750595 - processed_pseudogene KNOWN OTTHUMG00000184820.1 637 637 1 ENSG00000196993.7 NPIPB9 chr16 28751787 28772807 + protein_coding KNOWN OTTHUMG00000170452.1 21021 2123 15 ENSG00000278528.1 RP11-1348G14.7 chr16 28773824 28777534 - unprocessed_pseudogene KNOWN OTTHUMG00000187961.1 3711 255 2 ENSG00000251417.2 RP11-1348G14.4 chr16 28802743 28817828 + lincRNA NOVEL OTTHUMG00000175740.2 15086 1963 2 ENSG00000240634.1 RP11-1348G14.1 chr16 28813980 28814673 - processed_pseudogene KNOWN OTTHUMG00000158118.1 694 694 1 ENSG00000260796.1 RP11-1348G14.5 chr16 28820570 28822033 - antisense NOVEL OTTHUMG00000176433.1 1464 540 2 ENSG00000225063.1 RP11-383G10.5 chr1 205233821 205236867 - antisense NOVEL OTTHUMG00000040690.1 3047 686 2 ENSG00000275807.1 RP11-1348G14.8 chr16 28822431 28823969 - antisense NOVEL OTTHUMG00000188139.1 1539 1539 1 ENSG00000168488.17 ATXN2L chr16 28823035 28837237 + protein_coding KNOWN OTTHUMG00000097038.5 14203 6508 273 ENSG00000260570.1 RP11-24N18.1 chr16 28830612 28837200 - antisense NOVEL OTTHUMG00000176589.1 6589 295 2 ENSG00000178952.7 TUFM chr16 28842411 28846408 - protein_coding KNOWN OTTHUMG00000097039.3 3998 2271 22 ENSG00000264455.1 MIR4721 chr16 28843919 28844007 - miRNA KNOWN NA 89 89 1 ENSG00000178188.13 SH2B1 chr16 28846600 28874212 + protein_coding KNOWN OTTHUMG00000176590.1 27613 7145 98 ENSG00000261766.1 RP11-22P6.2 chr16 28862166 28863340 - antisense NOVEL OTTHUMG00000176591.1 1175 544 2 ENSG00000196296.12 ATP2A1 chr16 28878405 28904509 + protein_coding KNOWN OTTHUMG00000131760.2 26105 4587 88 ENSG00000260442.4 ATP2A1-AS1 chr16 28878957 28879920 - antisense NOVEL OTTHUMG00000176592.1 964 583 4 ENSG00000252461.1 SNORA43 chr16 28881480 28881607 - snoRNA NOVEL NA 128 128 1 ENSG00000163545.7 NUAK2 chr1 205302059 205321755 - protein_coding KNOWN OTTHUMG00000037196.1 19697 3405 7 ENSG00000177548.11 RABEP2 chr16 28904421 28936526 - protein_coding KNOWN OTTHUMG00000176593.1 32106 4566 79 ENSG00000177455.10 CD19 chr16 28931939 28939346 + protein_coding KNOWN OTTHUMG00000097049.3 7408 2711 82 ENSG00000176953.9 NFATC2IP chr16 28950807 28967097 + protein_coding KNOWN OTTHUMG00000097763.3 16291 5738 27 ENSG00000260853.1 RP11-264B17.2 chr16 28956687 28966883 - antisense NOVEL OTTHUMG00000176594.1 10197 1092 4 ENSG00000266868.1 MIR4517 chr16 28958583 28958661 + miRNA KNOWN NA 79 79 1 ENSG00000260367.2 RP11-264B17.4 chr16 28973962 28978824 - antisense NOVEL OTTHUMG00000176708.2 4863 1478 2 ENSG00000169682.16 SPNS1 chr16 28974221 28984548 + protein_coding KNOWN OTTHUMG00000131762.2 10328 3792 102 ENSG00000261067.5 RP11-264B17.3 chr16 28974804 28990783 + processed_transcript NOVEL OTTHUMG00000176707.1 15980 5317 36 ENSG00000281146.1 AC109460.1 chr16 28982014 28982130 + miRNA NOVEL NA 117 117 1 ENSG00000213658.9 LAT chr16 28984826 28990783 + protein_coding KNOWN OTTHUMG00000131761.3 5958 4430 122 ENSG00000162873.13 KLHDC8A chr1 205336065 205357090 - protein_coding KNOWN OTTHUMG00000037199.4 21026 3651 56 ENSG00000261552.1 RP11-264B17.5 chr16 28989140 28990778 - antisense NOVEL OTTHUMG00000176709.1 1639 454 2 ENSG00000196796.5 CTB-134H23.2 chr16 29038655 29052726 + unprocessed_pseudogene KNOWN OTTHUMG00000170453.2 14072 1354 8 ENSG00000260908.1 CTB-134H23.3 chr16 29053732 29108108 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000176710.1 54377 2180 7 ENSG00000103472.8 RRN3P2 chr16 29074976 29116718 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000176711.1 41743 2341 46 ENSG00000260517.2 RP11-426C22.5 chr16 29116127 29217860 + lincRNA NOVEL OTTHUMG00000176111.2 101734 3068 6 ENSG00000279106.1 RP11-426C22.1 chr16 29204633 29205855 + TEC KNOWN OTTHUMG00000176107.1 1223 1223 1 ENSG00000259807.1 RP11-426C22.4 chr16 29217170 29220031 - lincRNA NOVEL OTTHUMG00000176712.1 2862 2099 2 ENSG00000273582.1 RP11-426C22.7 chr16 29225594 29226348 - lincRNA NOVEL OTTHUMG00000186852.1 755 359 2 ENSG00000260953.1 RP11-426C22.6 chr16 29262273 29264479 - lincRNA NOVEL OTTHUMG00000176713.1 2207 561 2 ENSG00000277999.1 RP11-426C22.8 chr16 29272220 29272772 + lincRNA NOVEL OTTHUMG00000186853.1 553 553 1 ENSG00000235363.1 SNRPGP10 chr1 205351247 205351471 + processed_pseudogene KNOWN OTTHUMG00000037198.1 225 225 1 ENSG00000198106.8 SNX29P2 chr16 29291220 29372110 + lincRNA NOVEL OTTHUMG00000171428.1 80891 4818 11 ENSG00000260413.1 RP11-231C14.6 chr16 29312350 29331277 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000176714.1 18928 653 5 ENSG00000271699.4 SNX29P2 chr16 29350746 29370272 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000184229.1 19527 2113 17 ENSG00000278078.1 RP11-231C14.8 chr16 29380242 29380345 + unprocessed_pseudogene KNOWN OTTHUMG00000187963.1 104 104 1 ENSG00000254206.4 NPIPB11 chr16 29381354 29404029 - protein_coding PUTATIVE OTTHUMG00000170467.1 22676 4398 14 ENSG00000278509.1 AC025279.1 chr16 29422851 29422959 - miRNA NOVEL NA 109 109 1 ENSG00000254634.4 SMG1P6 chr16 29425800 29447026 - unprocessed_pseudogene KNOWN OTTHUMG00000166914.1 21227 2930 19 ENSG00000261740.4 RP11-345J4.5 chr16 29443056 29454651 - protein_coding KNOWN OTTHUMG00000176715.2 11596 3591 22 ENSG00000260335.1 RP11-345J4.6 chr16 29449191 29449625 + unprocessed_pseudogene KNOWN OTTHUMG00000176756.1 435 152 2 ENSG00000183336.7 BOLA2 chr16 29453593 29454964 - protein_coding KNOWN OTTHUMG00000176757.1 1372 1012 3 ENSG00000226235.1 LEMD1-AS1 chr1 205373252 205387440 + antisense NOVEL OTTHUMG00000037200.1 14189 2781 4 ENSG00000181625.16 SLX1B chr16 29454501 29458219 + protein_coding KNOWN OTTHUMG00000132110.2 3719 2462 21 ENSG00000260280.4 SLX1B-SULT1A4 chr16 29455105 29464963 + processed_transcript KNOWN OTTHUMG00000176758.2 9859 4054 29 ENSG00000213648.9 SULT1A4 chr16 29459889 29464976 + protein_coding KNOWN OTTHUMG00000170468.2 5088 1979 30 ENSG00000258150.4 RP11-345J4.3 chr16 29464967 29467833 - protein_coding PUTATIVE OTTHUMG00000170469.2 2867 1819 11 ENSG00000279228.1 RP11-345J4.4 chr16 29467161 29467578 + TEC KNOWN OTTHUMG00000170470.2 418 418 1 ENSG00000257691.2 RP11-345J4.1 chr16 29475064 29475355 + processed_pseudogene KNOWN OTTHUMG00000170471.2 292 292 1 ENSG00000257506.1 RP11-231C14.5 chr16 29478879 29482591 + unprocessed_pseudogene KNOWN OTTHUMG00000170472.1 3713 259 2 ENSG00000169203.15 RP11-231C14.4 chr16 29483642 29505999 - protein_coding NOVEL OTTHUMG00000163547.2 22358 4331 50 ENSG00000276338.1 AC133555.1 chr16 29524592 29524700 - miRNA NOVEL NA 109 109 1 ENSG00000205534.6 SMG1P2 chr16 29527568 29594966 - unprocessed_pseudogene KNOWN OTTHUMG00000176759.1 67399 4221 29 ENSG00000280267.2 PRAMEF25 chr1 13049476 13158092 - protein_coding NOVEL OTTHUMG00000009499.3 108617 2392 9 ENSG00000186007.8 LEMD1 chr1 205381378 205457091 - protein_coding KNOWN OTTHUMG00000037201.3 75714 2199 37 ENSG00000279583.1 RP11-368N21.5 chr16 29595130 29596137 - TEC KNOWN OTTHUMG00000177640.1 1008 1008 1 ENSG00000266758.1 MIR3680-1 chr16 29599179 29599265 - miRNA KNOWN NA 87 87 1 ENSG00000260727.1 SLC7A5P1 chr16 29613104 29613640 - unprocessed_pseudogene KNOWN OTTHUMG00000176771.1 537 537 1 ENSG00000260133.1 CA5AP1 chr16 29618785 29636328 - unprocessed_pseudogene KNOWN OTTHUMG00000176772.1 17544 576 5 ENSG00000260514.1 RP11-368N21.1 chr16 29624517 29624825 + processed_pseudogene KNOWN OTTHUMG00000176773.1 309 309 1 ENSG00000197471.10 SPN chr16 29662979 29670876 + protein_coding KNOWN OTTHUMG00000097765.4 7898 7382 10 ENSG00000277669.1 AC009133.22 chr16 29663279 29695144 + protein_coding NOVEL OTTHUMG00000188617.1 31866 610 3 ENSG00000103485.16 QPRT chr16 29679008 29698699 + protein_coding KNOWN OTTHUMG00000097770.4 19692 3642 12 ENSG00000222375.1 RN7SKP127 chr16 29731051 29731404 - misc_RNA KNOWN NA 354 354 1 ENSG00000185905.3 C16orf54 chr16 29742463 29746006 - protein_coding KNOWN OTTHUMG00000132116.1 3544 2585 2 ENSG00000281406.1 BLACAT1 chr1 205434886 205437879 - lincRNA KNOWN OTTHUMG00000189561.1 2994 2994 1 ENSG00000260719.1 AC009133.17 chr16 29745247 29748299 + antisense NOVEL OTTHUMG00000177138.1 3053 1656 2 ENSG00000174992.7 ZG16 chr16 29778240 29782973 + protein_coding KNOWN OTTHUMG00000177139.4 4734 3132 4 ENSG00000079616.11 KIF22 chr16 29790719 29805385 + protein_coding KNOWN OTTHUMG00000097771.5 14667 4312 82 ENSG00000275857.1 AC009133.21 chr16 29804430 29804990 - antisense NOVEL OTTHUMG00000177646.2 561 561 1 ENSG00000103495.12 MAZ chr16 29806106 29811164 + protein_coding KNOWN OTTHUMG00000190393.1 5059 3504 63 ENSG00000259952.1 AC009133.15 chr16 29806496 29807732 - antisense NOVEL OTTHUMG00000177140.1 1237 547 2 ENSG00000238045.8 AC009133.12 chr16 29808636 29821252 - antisense NOVEL OTTHUMG00000132117.4 12617 4039 14 ENSG00000280607.1 AC009133.24 chr16 29808679 29812227 + processed_transcript NOVEL OTTHUMG00000132119.46 3549 473 3 ENSG00000167371.15 PRRT2 chr16 29811382 29815892 + protein_coding KNOWN OTTHUMG00000177142.45 4511 3573 20 ENSG00000280893.1 PAGR1 chr16 29812261 29820092 + protein_coding NOVEL OTTHUMG00000189724.1 7832 2252 6 ENSG00000199059.2 MIR135B chr1 205448291 205448403 - miRNA KNOWN NA 113 113 1 ENSG00000280789.1 PAGR1 chr16 29815952 29820117 + protein_coding KNOWN OTTHUMG00000177143.8 4166 1702 3 ENSG00000281348.1 CTD-2574D22.6 chr16 29817239 29830627 + protein_coding NOVEL OTTHUMG00000178205.2 13389 556 3 ENSG00000013364.17 MVP chr16 29820394 29848039 + protein_coding KNOWN OTTHUMG00000048227.8 27646 6141 90 ENSG00000103502.12 CDIPT chr16 29858357 29863736 - protein_coding KNOWN OTTHUMG00000177144.3 5380 3325 53 ENSG00000278713.1 CTD-2574D22.7 chr16 29862760 29863417 + antisense NOVEL OTTHUMG00000186861.1 658 658 1 ENSG00000214725.6 CDIPT-AS1 chr16 29863593 29868053 + antisense NOVEL OTTHUMG00000177145.2 4461 900 12 ENSG00000174938.13 SEZ6L2 chr16 29871159 29899547 - protein_coding KNOWN OTTHUMG00000132112.3 28389 4110 103 ENSG00000174939.9 ASPHD1 chr16 29900375 29919864 + protein_coding KNOWN OTTHUMG00000132121.4 19490 2312 20 ENSG00000174943.8 KCTD13 chr16 29905012 29927035 - protein_coding KNOWN OTTHUMG00000132120.4 22024 4861 39 ENSG00000279789.1 CTD-2574D22.3 chr16 29913144 29915337 - TEC KNOWN OTTHUMG00000177146.1 2194 2194 1 ENSG00000224717.1 RP11-576D8.4 chr1 205455929 205469024 + lincRNA NOVEL OTTHUMG00000037202.1 13096 2885 3 ENSG00000260114.2 CTD-2574D22.4 chr16 29919634 29921905 - sense_intronic NOVEL OTTHUMG00000177147.3 2272 2272 1 ENSG00000247735.2 CTD-2574D22.2 chr16 29926836 29928933 + antisense NOVEL OTTHUMG00000177148.1 2098 1762 2 ENSG00000149932.15 TMEM219 chr16 29940885 29973052 + protein_coding KNOWN OTTHUMG00000177105.4 32168 2428 42 ENSG00000149930.16 TAOK2 chr16 29973641 29992261 + protein_coding KNOWN OTTHUMG00000132111.3 18621 9058 65 ENSG00000149929.14 HIRIP3 chr16 29992321 29996436 - protein_coding KNOWN OTTHUMG00000132118.4 4116 3931 29 ENSG00000169592.13 INO80E chr16 29995294 30005793 + protein_coding KNOWN OTTHUMG00000132114.5 10500 6076 87 ENSG00000149927.16 DOC2A chr16 30005509 30023270 - protein_coding KNOWN OTTHUMG00000132109.6 17762 6426 128 ENSG00000167194.6 C16orf92 chr16 30023334 30027736 + protein_coding KNOWN OTTHUMG00000177107.1 4403 1115 14 ENSG00000149926.12 FAM57B chr16 30024427 30052978 - protein_coding KNOWN OTTHUMG00000132105.4 28552 4920 32 ENSG00000149925.15 ALDOA chr16 30053090 30070457 + protein_coding KNOWN OTTHUMG00000132107.4 17368 6153 192 ENSG00000117266.14 CDK18 chr1 205504595 205532793 + protein_coding KNOWN OTTHUMG00000037203.5 28199 6831 165 ENSG00000274904.1 CTD-2515O10.5 chr16 30064306 30064825 - antisense NOVEL OTTHUMG00000186864.1 520 520 1 ENSG00000149923.12 PPP4C chr16 30075978 30085377 + protein_coding KNOWN OTTHUMG00000132113.3 9400 2734 92 ENSG00000149922.9 TBX6 chr16 30085793 30091887 - protein_coding KNOWN OTTHUMG00000132115.6 6095 3137 37 ENSG00000090238.10 YPEL3 chr16 30092314 30096915 - protein_coding KNOWN OTTHUMG00000176853.1 4602 3181 50 ENSG00000250616.2 RP11-455F5.3 chr16 30096430 30104116 + antisense NOVEL OTTHUMG00000176855.1 7687 1650 2 ENSG00000102886.13 GDPD3 chr16 30104810 30113856 - protein_coding KNOWN OTTHUMG00000132106.3 9047 1891 27 ENSG00000261367.1 RP11-455F5.4 chr16 30107675 30110541 + antisense NOVEL OTTHUMG00000176856.1 2867 553 2 ENSG00000275371.1 RP11-455F5.6 chr16 30110895 30111955 + antisense NOVEL OTTHUMG00000186865.1 1061 1061 1 ENSG00000102882.10 MAPK3 chr16 30114105 30123506 - protein_coding KNOWN OTTHUMG00000132149.7 9402 3669 91 ENSG00000102879.14 CORO1A chr16 30182827 30189076 + protein_coding KNOWN OTTHUMG00000132148.2 6250 4871 91 ENSG00000253097.1 RNU2-19P chr1 205566716 205566799 + snRNA KNOWN NA 84 84 1 ENSG00000261416.1 RP11-455F5.5 chr16 30183505 30184957 - antisense NOVEL OTTHUMG00000176857.1 1453 811 8 ENSG00000169627.7 BOLA2B chr16 30192934 30194306 - protein_coding KNOWN OTTHUMG00000176858.1 1373 1365 10 ENSG00000132207.16 SLX1A chr16 30193887 30197561 + protein_coding KNOWN OTTHUMG00000176859.1 3675 2464 24 ENSG00000213599.8 SLX1A-SULT1A3 chr16 30193892 30204310 + protein_coding KNOWN OTTHUMG00000048084.2 10419 4611 68 ENSG00000261052.4 SULT1A3 chr16 30199228 30204310 + protein_coding KNOWN OTTHUMG00000048083.3 5083 2561 53 ENSG00000258130.6 RP11-347C12.3 chr16 30204316 30209071 - protein_coding NOVEL OTTHUMG00000170482.3 4756 2707 16 ENSG00000278887.1 RP11-347C12.4 chr16 30206510 30206927 + TEC KNOWN OTTHUMG00000170487.1 418 418 1 ENSG00000261444.1 RP11-347C12.9 chr16 30214409 30214699 + unprocessed_pseudogene KNOWN OTTHUMG00000176860.1 291 210 2 ENSG00000261203.1 RP11-347C12.8 chr16 30218220 30221930 + unprocessed_pseudogene KNOWN OTTHUMG00000176861.1 3711 258 2 ENSG00000198064.12 RP11-347C12.1 chr16 30222937 30254510 - protein_coding NOVEL OTTHUMG00000163556.2 31574 5202 34 ENSG00000174514.11 MFSD4 chr1 205568885 205602918 + protein_coding KNOWN OTTHUMG00000037197.3 34034 5790 59 ENSG00000278557.1 AC106782.1 chr16 30264576 30264684 - miRNA NOVEL NA 109 109 1 ENSG00000183604.13 SMG1P5 chr16 30267553 30335374 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000166915.2 67822 4791 51 ENSG00000273724.1 RP11-347C12.12 chr16 30336400 30343336 + unprocessed_pseudogene KNOWN OTTHUMG00000187966.1 6937 337 2 ENSG00000169217.7 CD2BP2 chr16 30350766 30355361 - protein_coding KNOWN OTTHUMG00000132397.2 4596 3773 16 ENSG00000260219.2 RP11-347C12.10 chr16 30355441 30357104 + lincRNA NOVEL OTTHUMG00000176862.2 1664 992 2 ENSG00000169221.12 TBC1D10B chr16 30357102 30370264 - protein_coding KNOWN OTTHUMG00000132396.5 13163 6699 34 ENSG00000274653.1 RP11-347C12.11 chr16 30359825 30360336 + antisense NOVEL OTTHUMG00000186866.2 512 512 1 ENSG00000180209.10 MYLPF chr16 30370934 30377991 + protein_coding KNOWN OTTHUMG00000132399.3 7058 1119 29 ENSG00000180035.9 ZNF48 chr16 30378106 30400108 + protein_coding KNOWN OTTHUMG00000048195.4 22003 3744 18 ENSG00000180096.10 SEPT1 chr16 30378133 30395991 - protein_coding KNOWN OTTHUMG00000176984.4 17859 4217 70 ENSG00000206762.1 RNU6-418P chr1 205595041 205595147 + snRNA KNOWN NA 107 107 1 ENSG00000280137.1 RP11-297C4.6 chr16 30379763 30380110 - TEC KNOWN OTTHUMG00000184132.1 348 348 1 ENSG00000179965.10 ZNF771 chr16 30407297 30431108 + protein_coding KNOWN OTTHUMG00000176985.3 23812 5637 11 ENSG00000199787.1 SNORA42 chr16 30419625 30419759 - snoRNA NOVEL NA 135 135 1 ENSG00000179958.7 DCTPP1 chr16 30423619 30430075 - protein_coding KNOWN OTTHUMG00000132416.4 6457 1581 13 ENSG00000179918.16 SEPHS2 chr16 30443631 30446181 - protein_coding KNOWN OTTHUMG00000176988.9 2551 2551 1 ENSG00000202476.1 Y_RNA chr16 30453997 30454097 - misc_RNA NOVEL NA 101 101 1 ENSG00000222701.1 Y_RNA chr16 30471587 30471703 + misc_RNA NOVEL NA 117 117 1 ENSG00000005844.16 ITGAL chr16 30472658 30523185 + protein_coding KNOWN OTTHUMG00000176964.3 50528 6472 145 ENSG00000261346.1 RP11-297C4.2 chr16 30477180 30489353 - antisense NOVEL OTTHUMG00000176965.1 12174 699 3 ENSG00000260487.1 RP11-297C4.3 chr16 30480588 30481346 - antisense NOVEL OTTHUMG00000176966.1 759 528 2 ENSG00000158711.12 ELK4 chr1 205597556 205631962 - protein_coding KNOWN OTTHUMG00000037221.2 34407 12142 24 ENSG00000251706.1 RNU7-61P chr16 30483135 30483195 - snRNA KNOWN NA 61 61 1 ENSG00000261332.1 RP11-297C4.1 chr16 30498766 30499554 - antisense NOVEL OTTHUMG00000176967.1 789 577 2 ENSG00000266305.1 MIR4518 chr16 30503919 30504001 + miRNA KNOWN NA 83 83 1 ENSG00000169957.9 ZNF768 chr16 30524001 30526821 - protein_coding KNOWN OTTHUMG00000132392.4 2821 2395 4 ENSG00000261459.1 ZNF747 chr16 30525923 30534852 - protein_coding NOVEL OTTHUMG00000176944.1 8930 1515 4 ENSG00000278922.1 AC002310.14 chr16 30526918 30528294 + TEC KNOWN OTTHUMG00000176945.1 1377 1377 1 ENSG00000169955.7 ZNF747 chr16 30530367 30535347 - protein_coding KNOWN OTTHUMG00000132401.2 4981 3936 7 ENSG00000260869.1 AC002310.13 chr16 30534227 30558279 - protein_coding PUTATIVE OTTHUMG00000176946.1 24053 377 2 ENSG00000235560.3 AC002310.12 chr16 30534752 30537144 + antisense NOVEL OTTHUMG00000176947.1 2393 1827 4 ENSG00000260494.1 AC002310.10 chr16 30537202 30538231 - unprocessed_pseudogene KNOWN OTTHUMG00000176948.1 1030 723 2 ENSG00000236942.1 RP11-6B6.3 chr1 205625483 205626153 + processed_pseudogene KNOWN OTTHUMG00000037222.1 671 353 2 ENSG00000169951.8 ZNF764 chr16 30553764 30558498 - protein_coding KNOWN OTTHUMG00000132406.2 4735 3113 8 ENSG00000229809.7 ZNF688 chr16 30569346 30572734 - protein_coding KNOWN OTTHUMG00000132408.4 3389 3023 18 ENSG00000239791.1 AC002310.7 chr16 30572250 30583860 + antisense NOVEL OTTHUMG00000158416.1 11611 1918 5 ENSG00000197162.9 ZNF785 chr16 30573740 30585771 - protein_coding KNOWN OTTHUMG00000176950.3 12032 4952 13 ENSG00000260167.1 RP11-146F11.5 chr16 30585907 30608593 + antisense NOVEL OTTHUMG00000176951.1 22687 482 2 ENSG00000261588.1 AC002310.17 chr16 30587662 30587920 - processed_pseudogene KNOWN OTTHUMG00000132398.3 259 259 1 ENSG00000156853.10 ZNF689 chr16 30602558 30624012 - protein_coding KNOWN OTTHUMG00000132415.2 21455 4159 23 ENSG00000260678.1 RP11-146F11.4 chr16 30615256 30615679 - transcribed_processed_pseudogene KNOWN OTTHUMG00000176952.1 424 424 1 ENSG00000261680.1 RP11-146F11.3 chr16 30624285 30624714 - processed_pseudogene KNOWN OTTHUMG00000176953.1 430 430 1 ENSG00000260113.3 RP11-146F11.2 chr16 30626976 30627178 + processed_pseudogene KNOWN OTTHUMG00000176954.3 203 203 1 ENSG00000229571.5 PRAMEF26 chr1 13060853 13077884 + protein_coding KNOWN OTTHUMG00000074741.3 17032 2013 12 ENSG00000158715.5 SLC45A3 chr1 205657851 205680459 - protein_coding KNOWN OTTHUMG00000037223.1 22609 3702 8 ENSG00000156858.10 PRR14 chr16 30650717 30656440 + protein_coding KNOWN OTTHUMG00000132414.3 5724 3860 81 ENSG00000156860.14 FBRS chr16 30658431 30670814 + protein_coding KNOWN OTTHUMG00000132390.11 12384 7218 61 ENSG00000280843.1 AC093249.1 chr16 30670160 30670297 + miRNA NOVEL NA 138 138 1 ENSG00000252074.1 RNU6-416P chr16 30675300 30675402 - snRNA KNOWN NA 103 103 1 ENSG00000261840.2 RP11-146F11.1 chr16 30697707 30699058 - antisense NOVEL OTTHUMG00000176915.2 1352 1148 4 ENSG00000080603.15 SRCAP chr16 30698209 30745194 + protein_coding KNOWN OTTHUMG00000132393.4 46986 15255 121 ENSG00000222287.1 RNU6-1043P chr16 30701337 30701435 - snRNA KNOWN NA 99 99 1 ENSG00000206755.1 SNORA30 chr16 30710537 30710665 + snoRNA KNOWN NA 129 129 1 ENSG00000260899.1 RP11-2C24.4 chr16 30740667 30751381 + processed_transcript NOVEL OTTHUMG00000176916.1 10715 883 5 ENSG00000156873.14 PHKG2 chr16 30748270 30761176 + protein_coding KNOWN OTTHUMG00000132400.5 12907 7509 76 ENSG00000275213.1 Metazoa_SRP chr1 205684018 205684307 + misc_RNA NOVEL NA 290 290 1 ENSG00000196118.10 C16orf93 chr16 30757423 30762710 - protein_coding KNOWN OTTHUMG00000167926.4 5288 3081 69 ENSG00000103549.20 RNF40 chr16 30761745 30776307 + protein_coding KNOWN OTTHUMG00000132394.7 14563 6523 108 ENSG00000280211.1 RP11-2C24.3 chr16 30773532 30776033 - TEC KNOWN OTTHUMG00000176904.1 2502 2502 1 ENSG00000102870.5 ZNF629 chr16 30778449 30787202 - protein_coding KNOWN OTTHUMG00000176905.2 8754 6087 3 ENSG00000274848.1 Metazoa_SRP chr16 30816030 30816302 + misc_RNA NOVEL NA 273 273 1 ENSG00000260082.1 RP11-2C24.5 chr16 30821068 30822110 - processed_pseudogene KNOWN OTTHUMG00000176917.1 1043 600 2 ENSG00000274678.1 RP11-2C24.7 chr16 30821338 30821884 + lincRNA NOVEL OTTHUMG00000186883.1 547 547 1 ENSG00000099385.10 BCL7C chr16 30833626 30894960 - protein_coding KNOWN OTTHUMG00000177719.2 61335 4398 25 ENSG00000260083.1 MIR762HG chr16 30875222 30895220 + antisense NOVEL OTTHUMG00000176766.2 19999 1815 8 ENSG00000265991.1 MIR4519 chr16 30875266 30875323 - miRNA KNOWN NA 58 58 1 ENSG00000069275.12 NUCKS1 chr1 205712819 205750276 - protein_coding KNOWN OTTHUMG00000035996.1 37458 6546 9 ENSG00000262721.1 AC106782.20 chr16 30875766 30895216 - sense_overlapping NOVEL OTTHUMG00000176779.2 19451 561 2 ENSG00000211591.1 MIR762 chr16 30893903 30893985 + miRNA KNOWN NA 83 83 1 ENSG00000150281.6 CTF1 chr16 30896607 30903560 + protein_coding KNOWN OTTHUMG00000132413.2 6954 1664 6 ENSG00000230447.2 CTF2P chr16 30904348 30910208 - unitary_pseudogene KNOWN OTTHUMG00000154385.1 5861 604 3 ENSG00000260852.1 FBXL19-AS1 chr16 30919319 30923269 - antisense KNOWN OTTHUMG00000176767.1 3951 3951 1 ENSG00000099364.15 FBXL19 chr16 30923055 30948783 + protein_coding KNOWN OTTHUMG00000132403.4 25729 4340 71 ENSG00000261487.1 AC135048.13 chr16 30948386 30956511 + processed_transcript NOVEL OTTHUMG00000132409.36 8126 1630 5 ENSG00000175938.6 ORAI3 chr16 30949066 30956461 + protein_coding KNOWN OTTHUMG00000176768.35 7396 2643 10 ENSG00000275263.1 RP11-1072A3.4 chr16 30956872 30957199 - lincRNA NOVEL OTTHUMG00000186886.1 328 328 1 ENSG00000099381.15 SETD1A chr16 30957294 30985116 + protein_coding KNOWN OTTHUMG00000150474.2 27823 6903 25 ENSG00000201944.1 SNORA72 chr1 205731221 205731352 - snoRNA NOVEL NA 132 132 1 ENSG00000279196.1 RP11-1072A3.3 chr16 30984630 30988270 - TEC KNOWN OTTHUMG00000176774.1 3641 3641 1 ENSG00000099377.12 HSD3B7 chr16 30985207 30989152 + protein_coding KNOWN OTTHUMG00000132417.4 3946 2495 23 ENSG00000099365.8 STX1B chr16 30989256 31010628 - protein_coding KNOWN OTTHUMG00000132391.3 21373 5408 32 ENSG00000103496.13 STX4 chr16 31032889 31042975 + protein_coding KNOWN OTTHUMG00000132404.9 10087 4078 99 ENSG00000260911.2 RP11-196G11.2 chr16 31043150 31049868 + lincRNA NOVEL OTTHUMG00000176730.2 6719 449 2 ENSG00000232748.3 RP11-196G11.6 chr16 31056460 31062803 + lincRNA NOVEL OTTHUMG00000187304.1 6344 3593 3 ENSG00000167394.11 ZNF668 chr16 31060843 31074320 - protein_coding KNOWN OTTHUMG00000047357.4 13478 3935 29 ENSG00000261124.1 AC135050.5 chr16 31065495 31069246 + antisense NOVEL OTTHUMG00000176748.1 3752 504 2 ENSG00000167395.10 ZNF646 chr16 31074422 31084196 + protein_coding KNOWN OTTHUMG00000047355.2 9775 8635 8 ENSG00000151006.7 PRSS53 chr16 31083425 31089628 - protein_coding KNOWN OTTHUMG00000047358.6 6204 5501 17 ENSG00000117280.11 RAB29 chr1 205767986 205775460 - protein_coding KNOWN OTTHUMG00000035998.3 7475 3882 38 ENSG00000255439.5 RP11-196G11.1 chr16 31083439 31094956 - protein_coding NOVEL OTTHUMG00000166077.2 11518 2716 20 ENSG00000167397.13 VKORC1 chr16 31090842 31095980 - protein_coding KNOWN OTTHUMG00000047408.4 5139 2191 22 ENSG00000280160.1 RP11-196G11.3 chr16 31093727 31095944 + TEC KNOWN OTTHUMG00000176775.1 2218 2218 1 ENSG00000103507.12 BCKDK chr16 31106107 31112791 + protein_coding KNOWN OTTHUMG00000047356.4 6685 3873 80 ENSG00000252809.3 AC135050.1 chr16 31109211 31109318 + miRNA NOVEL NA 108 108 1 ENSG00000103510.18 KAT8 chr16 31115754 31131393 + protein_coding KNOWN OTTHUMG00000132410.6 15640 4334 51 ENSG00000262766.1 RP11-196G11.4 chr16 31118078 31118747 + sense_intronic NOVEL OTTHUMG00000177740.1 670 543 2 ENSG00000278133.1 RP11-196G11.5 chr16 31122235 31124064 + sense_intronic NOVEL OTTHUMG00000186894.1 1830 756 3 ENSG00000261385.1 RP11-388M20.2 chr16 31131433 31131877 + antisense NOVEL OTTHUMG00000176749.1 445 357 2 ENSG00000052344.14 PRSS8 chr16 31131433 31135762 - protein_coding KNOWN OTTHUMG00000176750.3 4330 3010 25 ENSG00000133065.9 SLC41A1 chr1 205789093 205813748 - protein_coding KNOWN OTTHUMG00000036000.3 24656 6357 26 ENSG00000178226.9 PRSS36 chr16 31138925 31150094 - protein_coding KNOWN OTTHUMG00000176751.3 11170 3685 71 ENSG00000263343.1 RP11-388M20.7 chr16 31165648 31165927 + processed_pseudogene KNOWN OTTHUMG00000177741.2 280 280 1 ENSG00000262366.1 NDUFA3P6 chr16 31174573 31174822 + processed_pseudogene KNOWN OTTHUMG00000177742.2 250 250 1 ENSG00000089280.17 FUS chr16 31180110 31194871 + protein_coding KNOWN OTTHUMG00000132395.5 14762 10283 101 ENSG00000260304.1 RP11-388M20.6 chr16 31182511 31183285 - antisense NOVEL OTTHUMG00000176752.1 775 463 2 ENSG00000260060.1 RP11-388M20.1 chr16 31196131 31196963 + antisense NOVEL OTTHUMG00000176115.1 833 833 1 ENSG00000103490.13 PYCARD chr16 31201485 31203450 - protein_coding KNOWN OTTHUMG00000176753.29 1966 1661 9 ENSG00000261359.2 PYCARD-AS1 chr16 31201885 31203452 + antisense NOVEL OTTHUMG00000132405.30 1568 1095 2 ENSG00000177238.12 TRIM72 chr16 31214021 31231537 + protein_coding KNOWN OTTHUMG00000176754.2 17517 8500 14 ENSG00000169900.6 PYDC1 chr16 31215962 31217359 - protein_coding KNOWN OTTHUMG00000132407.2 1398 861 4 ENSG00000162877.11 PM20D1 chr1 205828022 205850132 - protein_coding KNOWN OTTHUMG00000035999.1 22111 2614 31 ENSG00000169896.15 ITGAM chr16 31259990 31332892 + protein_coding KNOWN OTTHUMG00000176612.5 72903 5665 80 ENSG00000140678.15 ITGAX chr16 31355134 31382997 + protein_coding KNOWN OTTHUMG00000132465.4 27864 7074 97 ENSG00000261245.2 RP11-120K18.3 chr16 31361278 31361695 - unprocessed_pseudogene KNOWN OTTHUMG00000176613.2 418 333 2 ENSG00000156886.11 ITGAD chr16 31393312 31426505 + protein_coding KNOWN OTTHUMG00000176614.1 33194 4411 41 ENSG00000260757.1 RP11-120K18.2 chr16 31402565 31404699 + sense_overlapping NOVEL OTTHUMG00000176615.1 2135 1767 2 ENSG00000156885.5 COX6A2 chr16 31427731 31428428 - protein_coding KNOWN OTTHUMG00000132463.3 698 541 5 ENSG00000277543.1 RP11-452L6.8 chr16 31428180 31428646 + antisense NOVEL OTTHUMG00000186897.1 467 467 1 ENSG00000176723.8 ZNF843 chr16 31432593 31443160 - protein_coding KNOWN OTTHUMG00000176616.2 10568 4564 7 ENSG00000261474.1 RP11-452L6.1 chr16 31449535 31453493 - lincRNA NOVEL OTTHUMG00000176118.1 3959 449 2 ENSG00000260267.1 RP11-452L6.5 chr16 31456711 31459736 - antisense NOVEL OTTHUMG00000176617.1 3026 3026 1 ENSG00000174502.17 SLC26A9 chr1 205913048 205943460 - protein_coding KNOWN OTTHUMG00000036001.2 30413 5628 86 ENSG00000140691.15 ARMC5 chr16 31458080 31467166 + protein_coding KNOWN OTTHUMG00000176618.3 9087 5545 44 ENSG00000280132.1 RP11-452L6.6 chr16 31470204 31472108 - TEC KNOWN OTTHUMG00000176619.1 1905 1905 1 ENSG00000140682.17 TGFB1I1 chr16 31471585 31477960 + protein_coding KNOWN OTTHUMG00000132467.5 6376 5403 122 ENSG00000140675.11 SLC5A2 chr16 31483002 31490860 + protein_coding KNOWN OTTHUMG00000176620.3 7859 4468 48 ENSG00000260740.2 AC026471.6 chr16 31487370 31488492 - antisense NOVEL OTTHUMG00000132464.3 1123 578 2 ENSG00000140688.15 C16orf58 chr16 31489471 31509309 - protein_coding KNOWN OTTHUMG00000132466.3 19839 3630 88 ENSG00000260625.2 RP11-452L6.7 chr16 31508471 31509256 + antisense NOVEL OTTHUMG00000176621.2 786 655 2 ENSG00000169877.8 AHSP chr16 31527864 31528803 + protein_coding KNOWN OTTHUMG00000132461.2 940 562 9 ENSG00000261648.1 CTD-2014E2.2 chr16 31546698 31547237 - lincRNA NOVEL OTTHUMG00000176622.1 540 540 1 ENSG00000213547.3 VN1R64P chr16 31546805 31547737 + unitary_pseudogene KNOWN OTTHUMG00000154494.1 933 933 1 ENSG00000227687.1 RP4-681L3.2 chr1 205935128 205935768 + antisense NOVEL OTTHUMG00000041669.1 641 230 2 ENSG00000261475.2 CTD-2014E2.6 chr16 31549143 31553567 - lincRNA NOVEL OTTHUMG00000177758.1 4425 568 2 ENSG00000260883.1 VN1R65P chr16 31554105 31554912 + unitary_pseudogene KNOWN OTTHUMG00000176624.1 808 808 1 ENSG00000261741.4 CTD-2014E2.5 chr16 31563082 31567716 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000176625.1 4635 1205 8 ENSG00000278885.1 CTD-2014E2.7 chr16 31566360 31567000 - TEC KNOWN OTTHUMG00000184121.1 641 641 1 ENSG00000261614.1 CSDAP1 chr16 31568386 31569475 - processed_pseudogene KNOWN OTTHUMG00000176626.1 1090 1090 1 ENSG00000260010.1 ZNF720P1 chr16 31601593 31603531 - processed_pseudogene KNOWN OTTHUMG00000176627.1 1939 1939 1 ENSG00000237185.1 VN1R66P chr16 31648307 31649222 + unprocessed_pseudogene KNOWN OTTHUMG00000154473.1 916 916 1 ENSG00000260631.1 RBM22P12 chr16 31680847 31682101 + processed_pseudogene KNOWN OTTHUMG00000154500.2 1255 1255 1 ENSG00000260472.1 CTD-2358C21.2 chr16 31697397 31697607 - processed_pseudogene KNOWN OTTHUMG00000176628.1 211 211 1 ENSG00000260568.1 CTD-2358C21.3 chr16 31699676 31700465 - lincRNA NOVEL OTTHUMG00000176629.1 790 538 3 ENSG00000276600.3 RAB7B chr1 205976740 206003461 - protein_coding KNOWN OTTHUMG00000189246.1 26722 3686 25 ENSG00000131797.11 CLUHP3 chr16 31700590 31711986 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000132462.6 11397 6235 43 ENSG00000276867.1 CTD-2358C21.5 chr16 31704728 31705260 + lincRNA NOVEL OTTHUMG00000186902.1 533 533 1 ENSG00000261731.2 CTD-2358C21.4 chr16 31709113 31711984 - antisense NOVEL OTTHUMG00000176630.2 2872 441 2 ENSG00000197302.9 ZNF720 chr16 31713229 31794869 + protein_coding KNOWN OTTHUMG00000167515.4 81641 9816 56 ENSG00000259810.2 AC002519.8 chr16 31788202 31790993 + sense_intronic NOVEL OTTHUMG00000177769.2 2792 2792 1 ENSG00000260722.1 VN1R67P chr16 31801585 31802497 - unitary_pseudogene KNOWN OTTHUMG00000176632.1 913 913 1 ENSG00000261457.3 AC002519.6 chr16 31802947 31807973 + transcribed_processed_pseudogene KNOWN OTTHUMG00000176633.2 5027 1458 5 ENSG00000180663.5 VN1R3 chr16 31807926 31808844 - unitary_pseudogene KNOWN OTTHUMG00000176634.1 919 919 1 ENSG00000261284.2 RBM22P13 chr16 31863633 31864876 + processed_pseudogene KNOWN OTTHUMG00000176533.2 1244 1244 1 ENSG00000259874.1 RP11-170L3.2 chr16 31870887 31871124 - processed_pseudogene KNOWN OTTHUMG00000176534.1 238 238 1 ENSG00000229344.1 RP5-857K21.7 chr1 632757 633438 + unprocessed_pseudogene KNOWN OTTHUMG00000002334.1 682 682 1 ENSG00000277058.2 HNRNPCL3 chr1 13060869 13062229 + protein_coding KNOWN OTTHUMG00000189236.2 1361 1148 2 ENSG00000196188.9 CTSE chr1 206009264 206023909 - protein_coding KNOWN OTTHUMG00000036121.1 14646 2671 22 ENSG00000185947.13 ZNF267 chr16 31873758 31917357 + protein_coding KNOWN OTTHUMG00000176535.16 43600 6333 25 ENSG00000259950.1 RP11-170L3.4 chr16 31894542 31894983 - processed_pseudogene KNOWN OTTHUMG00000177770.1 442 442 1 ENSG00000261289.2 RP11-170L3.5 chr16 31952160 31952473 + processed_pseudogene KNOWN OTTHUMG00000176537.2 314 314 1 ENSG00000197476.3 RP11-170L3.7 chr16 31962063 31962381 + processed_pseudogene KNOWN OTTHUMG00000176538.1 319 319 1 ENSG00000260218.1 RP11-170L3.6 chr16 31963803 31964079 + processed_pseudogene KNOWN OTTHUMG00000176539.1 277 277 1 ENSG00000260628.4 RP11-1166P10.1 chr16 31975803 32003728 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000176540.1 27926 2227 25 ENSG00000261727.2 RP11-1166P10.6 chr16 32008438 32084785 - transcribed_processed_pseudogene KNOWN OTTHUMG00000176559.1 76348 715 4 ENSG00000261704.2 IGHV1OR16-1 chr16 32034853 32035326 + IG_V_pseudogene KNOWN OTTHUMG00000176645.2 474 392 2 ENSG00000223931.2 RP11-1166P10.8 chr16 32051825 32052280 + unprocessed_pseudogene KNOWN OTTHUMG00000187301.1 456 345 2 ENSG00000260048.2 IGHV1OR16-3 chr16 32059084 32059372 + IG_V_pseudogene KNOWN OTTHUMG00000176557.2 289 205 2 ENSG00000280687.1 BX571818.1 chr1 206024548 206024683 + miRNA NOVEL NA 136 136 1 ENSG00000270472.2 IGHV3OR16-9 chr16 32066065 32066358 + IG_V_gene KNOWN OTTHUMG00000184753.1 294 294 2 ENSG00000230267.6 HERC2P4 chr16 32103245 32188107 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000176563.1 84863 6046 52 ENSG00000260584.1 RP11-1166P10.7 chr16 32116700 32116997 + processed_pseudogene KNOWN OTTHUMG00000176561.1 298 298 1 ENSG00000279997.1 RP11-56L13.3 chr16 32185624 32186311 + TEC KNOWN OTTHUMG00000176564.1 688 688 1 ENSG00000260847.1 RP11-17M15.1 chr16 32188333 32193530 + lincRNA NOVEL OTTHUMG00000176565.1 5198 866 2 ENSG00000260649.1 RP11-56L13.4 chr16 32189262 32189481 + transcribed_processed_pseudogene KNOWN OTTHUMG00000176566.1 220 220 1 ENSG00000260540.2 FAM108A9P chr16 32199902 32202822 + unprocessed_pseudogene KNOWN OTTHUMG00000176567.2 2921 574 3 ENSG00000260344.2 RP11-56L13.6 chr16 32213380 32213503 - processed_pseudogene KNOWN OTTHUMG00000176568.2 124 124 1 ENSG00000260575.1 RP11-56L13.7 chr16 32250620 32254422 - antisense NOVEL OTTHUMG00000176569.1 3803 262 2 ENSG00000205456.10 TP53TG3D chr16 32252719 32255922 + protein_coding KNOWN OTTHUMG00000132469.4 3204 2922 18 ENSG00000263961.5 C1orf186 chr1 206037231 206102459 + protein_coding KNOWN OTTHUMG00000184376.3 65229 3557 42 ENSG00000260402.1 RP11-56L13.1 chr16 32262827 32265514 - lincRNA NOVEL OTTHUMG00000176123.2 2688 2484 4 ENSG00000259822.2 RP11-1292F20.1 chr16 32278866 32279115 + processed_pseudogene KNOWN OTTHUMG00000176570.2 250 250 1 ENSG00000261127.2 RP11-17M15.2 chr16 32289547 32310555 - transcribed_processed_pseudogene KNOWN OTTHUMG00000176571.2 21009 2605 5 ENSG00000260516.2 RP11-17M15.4 chr16 32356981 32363695 - unprocessed_pseudogene KNOWN OTTHUMG00000176573.2 6715 242 3 ENSG00000260327.2 ACTR3BP3 chr16 32379071 32380049 - processed_pseudogene KNOWN OTTHUMG00000176495.2 979 979 1 ENSG00000260866.1 RP11-626K17.5 chr16 32388135 32436200 + unprocessed_pseudogene KNOWN OTTHUMG00000176496.1 48066 1389 9 ENSG00000260307.2 PABPC1P13 chr16 32439069 32441159 - processed_pseudogene KNOWN OTTHUMG00000176497.2 2091 1685 2 ENSG00000261541.1 RP11-626K17.3 chr16 32454612 32458758 - lincRNA NOVEL OTTHUMG00000176498.1 4147 4147 1 ENSG00000260662.2 RP11-626K17.2 chr16 32460266 32460362 - processed_pseudogene KNOWN OTTHUMG00000176499.2 97 97 1 ENSG00000261233.2 ABCD1P3 chr16 32475051 32478250 - unprocessed_pseudogene KNOWN OTTHUMG00000176500.2 3200 605 4 ENSG00000252692.1 SNORD60 chr1 206080239 206080324 + snoRNA NOVEL NA 86 86 1 ENSG00000259966.4 RP11-652G5.1 chr16 32600299 32615639 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000177778.1 15341 1158 18 ENSG00000262187.1 RP11-652G5.2 chr16 32618733 32618852 + unprocessed_pseudogene KNOWN OTTHUMG00000176501.2 120 120 1 ENSG00000261111.1 RP11-96K14.1 chr16 32635673 32636045 - processed_pseudogene KNOWN OTTHUMG00000176502.1 373 373 1 ENSG00000261569.4 RP11-586K12.11 chr16 32649193 32663956 + lincRNA NOVEL OTTHUMG00000176503.1 14764 812 6 ENSG00000261263.2 RP11-586K12.13 chr16 32650195 32650910 - transcribed_processed_pseudogene KNOWN OTTHUMG00000176505.1 716 420 3 ENSG00000260311.1 RP11-586K12.10 chr16 32663925 32666533 + lincRNA NOVEL OTTHUMG00000176506.1 2609 2405 4 ENSG00000183632.13 TP53TG3 chr16 32673528 32676732 - protein_coding KNOWN OTTHUMG00000176507.3 3205 3004 21 ENSG00000260974.1 RP11-586K12.8 chr16 32675037 32678831 + antisense NOVEL OTTHUMG00000176508.1 3795 262 2 ENSG00000261391.1 RP11-586K12.7 chr16 32715931 32716056 + processed_pseudogene KNOWN OTTHUMG00000176509.1 126 126 1 ENSG00000260864.1 FAM108A8P chr16 32726615 32729537 - unprocessed_pseudogene KNOWN OTTHUMG00000176510.1 2923 595 3 ENSG00000198049.6 AVPR1B chr1 206109692 206117699 - protein_coding KNOWN OTTHUMG00000184377.1 8008 2273 4 ENSG00000260845.1 RP11-586K12.4 chr16 32735909 32741094 - lincRNA NOVEL OTTHUMG00000176511.1 5186 866 2 ENSG00000261108.2 RP11-586K12.5 chr16 32739627 32740166 - processed_pseudogene KNOWN OTTHUMG00000176512.2 540 226 2 ENSG00000260644.5 HERC2P5 chr16 32741314 32776196 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000176513.3 34883 6078 39 ENSG00000278950.1 RP11-67H24.3 chr16 32781883 32784138 + TEC KNOWN OTTHUMG00000176514.1 2256 2256 1 ENSG00000279780.1 RP11-586K12.2 chr16 32786394 32787379 + TEC KNOWN OTTHUMG00000176515.1 986 986 1 ENSG00000279795.1 RP11-586K12.1 chr16 32787962 32788944 + TEC KNOWN OTTHUMG00000176516.1 983 983 1 ENSG00000260158.1 RP11-67H24.2 chr16 32809556 32824645 + lincRNA NOVEL OTTHUMG00000176517.1 15090 601 4 ENSG00000261719.1 RP11-67H24.1 chr16 32811029 32811251 - processed_pseudogene KNOWN OTTHUMG00000176518.1 223 223 1 ENSG00000259934.1 RP11-989E6.1 chr16 32845964 32846180 - processed_pseudogene KNOWN OTTHUMG00000176439.1 217 217 1 ENSG00000259303.5 IGHV2OR16-5 chr16 32847713 32848156 + IG_V_gene KNOWN OTTHUMG00000152881.4 444 358 2 ENSG00000226780.1 RP11-38J22.3 chr1 206117783 206126805 + antisense NOVEL OTTHUMG00000036120.1 9023 630 3 ENSG00000260047.1 BCAP31P2 chr16 32869985 32872049 + unprocessed_pseudogene KNOWN OTTHUMG00000176440.1 2065 358 3 ENSG00000214617.8 SLC6A10P chr16 32877469 32885501 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000132481.3 8033 4479 26 ENSG00000214614.2 RP11-989E6.3 chr16 32885194 32888874 + lincRNA NOVEL OTTHUMG00000176441.1 3681 2274 9 ENSG00000261834.2 IGHV3OR16-15 chr16 32903442 32903894 + IG_V_pseudogene KNOWN OTTHUMG00000176442.2 453 414 2 ENSG00000270864.1 IGHV3OR16-6 chr16 32915074 32915536 + IG_V_pseudogene KNOWN OTTHUMG00000176443.2 463 360 2 ENSG00000277304.1 RP11-989E6.13 chr16 32916974 32946392 + unprocessed_pseudogene KNOWN OTTHUMG00000187973.1 29419 1765 15 ENSG00000260610.1 RP11-989E6.11 chr16 32931768 32932569 - processed_pseudogene KNOWN OTTHUMG00000176651.1 802 802 1 ENSG00000261259.1 RP11-19N8.2 chr16 32951993 33028037 - transcribed_processed_pseudogene KNOWN OTTHUMG00000176444.1 76045 702 4 ENSG00000259852.2 IGHV1OR16-2 chr16 32978461 32978891 + IG_V_pseudogene KNOWN OTTHUMG00000176445.2 431 349 2 ENSG00000233732.5 IGHV3OR16-10 chr16 32995048 32995505 + IG_V_gene KNOWN OTTHUMG00000176446.3 458 350 2 ENSG00000225483.1 RP11-38J22.2 chr1 206160887 206161276 - processed_pseudogene KNOWN OTTHUMG00000036118.1 390 390 1 ENSG00000260921.1 RP11-989E6.8 chr16 32995537 32996770 + lincRNA NOVEL OTTHUMG00000176447.1 1234 650 3 ENSG00000259997.2 IGHV1OR16-4 chr16 33002333 33002621 + IG_V_pseudogene KNOWN OTTHUMG00000176448.2 289 205 2 ENSG00000271130.1 IGHV3OR16-8 chr16 33009175 33009620 + IG_V_gene NOVEL OTTHUMG00000176449.2 446 349 2 ENSG00000260141.1 RP11-19N8.4 chr16 33043609 33095431 - lincRNA NOVEL OTTHUMG00000176450.1 51823 1506 7 ENSG00000260900.1 RP11-19N8.3 chr16 33059936 33060098 + processed_pseudogene KNOWN OTTHUMG00000176451.1 163 163 1 ENSG00000261599.4 HERC2P8 chr16 33094204 33129090 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000176452.2 34887 6013 39 ENSG00000261682.1 RP11-19N8.7 chr16 33129316 33134499 + lincRNA NOVEL OTTHUMG00000176453.1 5184 866 2 ENSG00000259800.1 RP11-19N8.6 chr16 33130235 33130442 + processed_pseudogene KNOWN OTTHUMG00000176454.1 208 208 1 ENSG00000261536.2 ABHD17AP9 chr16 33140850 33143797 + unprocessed_pseudogene KNOWN OTTHUMG00000176455.2 2948 548 3 ENSG00000260414.1 RP11-1437A8.2 chr16 33154352 33154475 - processed_pseudogene KNOWN OTTHUMG00000176456.1 124 124 1 ENSG00000236889.1 RP11-38J22.1 chr1 206175060 206177246 - lincRNA NOVEL OTTHUMG00000036117.1 2187 271 2 ENSG00000260419.1 RP11-1437A8.3 chr16 33191561 33195354 - antisense NOVEL OTTHUMG00000176457.1 3794 262 2 ENSG00000205457.9 TP53TG3C chr16 33193659 33306938 + protein_coding KNOWN OTTHUMG00000176458.2 113280 3432 21 ENSG00000260827.1 RP11-1437A8.4 chr16 33203773 33206462 - lincRNA NOVEL OTTHUMG00000176459.1 2690 2486 4 ENSG00000261507.1 RP11-1437A8.6 chr16 33206431 33330342 - lincRNA NOVEL OTTHUMG00000176460.1 123912 540 3 ENSG00000275034.2 TP53TG3B chr16 33303739 33306935 + protein_coding NOVEL OTTHUMG00000189337.1 3197 2527 4 ENSG00000263337.1 RP11-1277H1.3 chr16 33345182 33345356 + processed_pseudogene KNOWN OTTHUMG00000177784.1 175 175 1 ENSG00000261509.5 TP53TG3B chr16 33360274 33363478 + protein_coding KNOWN OTTHUMG00000176461.3 3205 2749 13 ENSG00000261009.1 RP11-1437A8.5 chr16 33370473 33372915 - lincRNA NOVEL OTTHUMG00000176462.1 2443 2239 4 ENSG00000263204.1 RP11-1437A8.7 chr16 33386117 33386351 + processed_pseudogene KNOWN OTTHUMG00000177785.1 235 235 1 ENSG00000278848.2 TP53TG3C chr16 33459045 33462249 + protein_coding NOVEL OTTHUMG00000189349.1 3205 2535 4 ENSG00000196550.9 FAM72A chr1 206186179 206204414 - protein_coding KNOWN OTTHUMG00000042552.2 18236 3783 28 ENSG00000262090.1 RP11-23E10.5 chr16 33495943 33496093 - processed_pseudogene KNOWN OTTHUMG00000177786.1 151 151 1 ENSG00000260626.1 RP11-23E10.3 chr16 33533816 33534976 - lincRNA NOVEL OTTHUMG00000176464.1 1161 560 2 ENSG00000261200.1 RP11-989E6.10 chr16 33541842 33545812 - lincRNA NOVEL OTTHUMG00000176465.1 3971 3971 1 ENSG00000261466.2 RP11-23E10.2 chr16 33548297 33554408 - lincRNA NOVEL OTTHUMG00000176466.1 6112 660 3 ENSG00000261405.2 RP11-23E10.4 chr16 33562649 33570935 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000176467.1 8287 893 7 ENSG00000263277.2 RP11-293B20.3 chr16 33577495 33577624 + processed_pseudogene KNOWN OTTHUMG00000177787.2 130 130 1 ENSG00000259882.1 RP11-293B20.2 chr16 33587939 33622544 + unprocessed_pseudogene KNOWN OTTHUMG00000176351.1 34606 1422 10 ENSG00000260518.1 BMS1P8 chr16 33687025 33698504 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000176352.1 11480 1808 12 ENSG00000261580.1 ENPP7P13 chr16 33769421 33769679 + processed_pseudogene KNOWN OTTHUMG00000176353.1 259 259 1 ENSG00000260308.1 RP11-104C4.4 chr16 33771035 33771248 + processed_pseudogene KNOWN OTTHUMG00000176354.1 214 214 1 ENSG00000266028.6 SRGAP2 chr1 206203345 206464443 + protein_coding KNOWN OTTHUMG00000184381.4 261099 15675 122 ENSG00000270467.1 IGHV3OR16-12 chr16 33802764 33803217 + IG_V_gene NOVEL OTTHUMG00000176355.2 454 353 2 ENSG00000261153.2 RP11-104C4.2 chr16 33808778 33810767 + processed_pseudogene KNOWN OTTHUMG00000176356.2 1990 1990 1 ENSG00000271178.1 IGHV3OR16-13 chr16 33827214 33827661 + IG_V_gene NOVEL OTTHUMG00000176357.2 448 353 2 ENSG00000259680.5 RP11-812E19.9 chr16 33844784 33845229 - protein_coding PUTATIVE OTTHUMG00000176363.3 446 349 2 ENSG00000270924.1 RP11-812E19.13 chr16 33848476 33848644 - unprocessed_pseudogene KNOWN OTTHUMG00000184744.1 169 169 1 ENSG00000271691.1 RP11-812E19.12 chr16 33851785 33852069 - unprocessed_pseudogene KNOWN OTTHUMG00000184743.1 285 201 2 ENSG00000260312.1 RP11-812E19.7 chr16 33857935 33858864 - lincRNA NOVEL OTTHUMG00000176361.1 930 346 3 ENSG00000270318.1 IGHV3OR16-11 chr16 33858896 33859352 - IG_V_pseudogene KNOWN OTTHUMG00000184731.1 457 349 2 ENSG00000260525.1 RP11-812E19.10 chr16 33875039 33875468 - unprocessed_pseudogene KNOWN OTTHUMG00000176359.1 430 348 2 ENSG00000260781.1 ARHGAP23P1 chr16 33907419 33937167 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000176364.1 29749 2080 18 ENSG00000277862.1 WI2-2994D6.1 chr1 13095179 13097971 - unprocessed_pseudogene KNOWN OTTHUMG00000074740.2 2793 1447 3 ENSG00000229509.1 RP11-421E17.4 chr1 206333327 206333438 - unprocessed_pseudogene KNOWN OTTHUMG00000043621.1 112 112 1 ENSG00000271620.1 IGHV3OR16-7 chr16 33938337 33938799 - IG_V_pseudogene KNOWN OTTHUMG00000184739.1 463 360 2 ENSG00000261607.1 RP11-812E19.5 chr16 33948278 33948548 - unprocessed_pseudogene KNOWN OTTHUMG00000176366.1 271 271 1 ENSG00000259842.2 IGHV3OR16-16 chr16 33949976 33950420 - unprocessed_pseudogene KNOWN OTTHUMG00000176367.2 445 343 2 ENSG00000270401.1 RP11-812E19.14 chr16 33965655 33966091 - unprocessed_pseudogene KNOWN OTTHUMG00000176368.3 437 352 2 ENSG00000205452.4 RP11-812E19.3 chr16 33972912 33976346 - lincRNA NOVEL OTTHUMG00000185250.1 3435 1991 9 ENSG00000198555.7 RP11-598D12.4 chr16 33976039 33987630 + unprocessed_pseudogene KNOWN OTTHUMG00000176371.1 11592 2415 15 ENSG00000261217.2 BCAP31P1 chr16 33988406 33991551 - unprocessed_pseudogene KNOWN OTTHUMG00000176372.2 3146 385 4 ENSG00000259990.2 RP11-598D12.1 chr16 34013394 34013830 - unprocessed_pseudogene KNOWN OTTHUMG00000176373.2 437 351 2 ENSG00000261197.1 RP11-598D12.2 chr16 34015262 34051361 + unprocessed_pseudogene KNOWN OTTHUMG00000176374.1 36100 291 2 ENSG00000262561.1 CTD-2522B17.8 chr16 34120470 34120677 + processed_pseudogene KNOWN OTTHUMG00000177792.1 208 208 1 ENSG00000233501.1 SRGAP2-AS1 chr1 206378864 206381599 - antisense NOVEL OTTHUMG00000036348.2 2736 2178 2 ENSG00000261440.1 CTD-2522B17.5 chr16 34135736 34136792 - processed_pseudogene KNOWN OTTHUMG00000176375.1 1057 1057 1 ENSG00000260087.1 PCMTD1P2 chr16 34139189 34139543 + processed_pseudogene KNOWN OTTHUMG00000176376.1 355 355 1 ENSG00000259987.1 CTD-2522B17.4 chr16 34141256 34142006 - processed_pseudogene KNOWN OTTHUMG00000176377.1 751 751 1 ENSG00000260207.1 CTD-2522B17.6 chr16 34142456 34142849 + processed_pseudogene KNOWN OTTHUMG00000176378.1 394 394 1 ENSG00000265616.1 AC136932.2 chr16 34143482 34143554 - miRNA NOVEL NA 73 73 1 ENSG00000256642.1 LINC00273 chr16 34158585 34160036 - lincRNA KNOWN OTTHUMG00000176379.1 1452 1452 1 ENSG00000207986.1 AC136932.1 chr16 34159185 34159299 + miRNA NOVEL NA 115 115 1 ENSG00000200434.1 RNA5-8SP2 chr16 34162959 34163110 + rRNA KNOWN NA 152 152 1 ENSG00000279800.1 ABBA01017803.1 chr16 34266044 34268649 - pseudogene KNOWN NA 2606 2604 2 ENSG00000279165.1 CTD-2144E22.9 chr16 34941977 34943880 + TEC KNOWN OTTHUMG00000176220.1 1904 1904 1 ENSG00000263528.6 IKBKE chr1 206470476 206496889 + protein_coding KNOWN OTTHUMG00000184613.1 26414 3791 82 ENSG00000260854.1 CTD-2144E22.8 chr16 34978744 34979844 - lincRNA NOVEL OTTHUMG00000176221.1 1101 552 2 ENSG00000261331.1 CTD-2144E22.7 chr16 34979375 34979615 + processed_pseudogene KNOWN OTTHUMG00000176222.1 241 241 1 ENSG00000179755.3 CTD-2144E22.5 chr16 35021749 35024229 + lincRNA NOVEL OTTHUMG00000176223.2 2481 2481 1 ENSG00000261566.1 CTD-2144E22.6 chr16 35022851 35024250 - lincRNA NOVEL OTTHUMG00000176224.1 1400 714 2 ENSG00000262885.1 CTD-2144E22.11 chr16 35023339 35023765 + processed_pseudogene KNOWN OTTHUMG00000177793.1 427 427 1 ENSG00000216671.6 CCNYL3 chr16 35040164 35084313 + unprocessed_pseudogene KNOWN OTTHUMG00000187976.1 44150 998 9 ENSG00000278138.1 CTD-2144E22.13 chr16 35082264 35085060 + unprocessed_pseudogene KNOWN OTTHUMG00000187977.1 2797 843 7 ENSG00000261053.1 NAMPTP3 chr16 35085896 35086119 + processed_pseudogene KNOWN OTTHUMG00000176226.1 224 224 1 ENSG00000260809.1 CTD-2144E22.10 chr16 35090501 35104834 + unprocessed_pseudogene KNOWN OTTHUMG00000176657.1 14334 1518 11 ENSG00000259979.1 VN1R68P chr16 35118238 35118956 - processed_pseudogene KNOWN OTTHUMG00000176228.1 719 719 1 ENSG00000278465.1 MIR6769B chr1 206474803 206474864 + miRNA KNOWN NA 62 62 1 ENSG00000260724.1 VN1R69P chr16 35134514 35135075 + processed_pseudogene KNOWN OTTHUMG00000176229.1 562 562 1 ENSG00000260449.1 RP11-244B22.14 chr16 35140898 35141408 - processed_pseudogene KNOWN OTTHUMG00000176230.1 511 511 1 ENSG00000261800.1 RP11-244B22.11 chr16 35143722 35144881 + lincRNA NOVEL OTTHUMG00000176231.1 1160 703 2 ENSG00000261836.1 RP11-244B22.12 chr16 35143985 35144474 - processed_pseudogene KNOWN OTTHUMG00000176232.1 490 490 1 ENSG00000280180.1 RP11-244B22.10 chr16 35148636 35154366 + TEC KNOWN OTTHUMG00000176233.1 5731 5731 1 ENSG00000261510.1 RP11-244B22.13 chr16 35149457 35149790 - processed_pseudogene KNOWN OTTHUMG00000176234.1 334 334 1 ENSG00000261461.1 UBE2MP1 chr16 35169692 35170241 - processed_pseudogene KNOWN OTTHUMG00000176235.1 550 550 1 ENSG00000261608.1 SLC25A1P4 chr16 35173316 35174093 + processed_pseudogene KNOWN OTTHUMG00000176236.1 778 778 1 ENSG00000260073.2 RP11-488I20.9 chr16 35192687 35195661 - lincRNA NOVEL OTTHUMG00000176237.2 2975 2975 1 ENSG00000260590.1 RP11-244B22.7 chr16 35193335 35193734 + processed_pseudogene KNOWN OTTHUMG00000176238.1 400 400 1 ENSG00000162888.4 C1orf147 chr1 206491116 206497728 - antisense KNOWN OTTHUMG00000036338.1 6613 2096 2 ENSG00000261398.1 RP11-244B22.6 chr16 35195779 35197544 + lincRNA NOVEL OTTHUMG00000176239.1 1766 1766 1 ENSG00000261274.1 RP11-244B22.5 chr16 35207903 35208236 - processed_pseudogene KNOWN OTTHUMG00000176240.1 334 334 1 ENSG00000260958.2 RP11-488I20.8 chr16 35207937 35284146 + lincRNA NOVEL OTTHUMG00000176241.2 76210 1262 6 ENSG00000264479.1 AC023824.1 chr16 35208506 35208571 + miRNA NOVEL NA 66 66 1 ENSG00000260967.1 RARRES2P5 chr16 35221583 35222048 - processed_pseudogene KNOWN OTTHUMG00000176242.1 466 466 1 ENSG00000260984.1 FGFR3P5 chr16 35232412 35235984 - unprocessed_pseudogene KNOWN OTTHUMG00000176658.1 3573 886 2 ENSG00000259897.2 RP11-244B22.3 chr16 35245916 35247534 - unprocessed_pseudogene KNOWN OTTHUMG00000176243.2 1619 832 4 ENSG00000261010.1 RARRES2P6 chr16 35255192 35255633 - processed_pseudogene KNOWN OTTHUMG00000176244.1 442 442 1 ENSG00000261752.1 RP11-244B22.1 chr16 35258630 35259629 + processed_pseudogene KNOWN OTTHUMG00000176245.1 1000 1000 1 ENSG00000260846.2 RP11-488I20.7 chr16 35335277 35336889 - unprocessed_pseudogene KNOWN OTTHUMG00000176246.2 1613 832 4 ENSG00000261000.1 RP11-534L20.5 chr1 206503948 206504456 + lincRNA NOVEL OTTHUMG00000176318.1 509 509 1 ENSG00000261486.1 RARRES2P9 chr16 35344091 35344559 - processed_pseudogene KNOWN OTTHUMG00000176247.1 469 469 1 ENSG00000260427.1 RP11-488I20.5 chr16 35347385 35348297 + processed_pseudogene KNOWN OTTHUMG00000176248.1 913 913 1 ENSG00000260480.1 RP11-488I20.4 chr16 35352482 35353022 + processed_pseudogene KNOWN OTTHUMG00000176249.1 541 541 1 ENSG00000259841.5 LINC01566 chr16 35363412 35390584 + lincRNA NOVEL OTTHUMG00000176250.2 27173 2961 14 ENSG00000260291.1 FRG2GP chr16 35384144 35385086 - unprocessed_pseudogene KNOWN OTTHUMG00000176251.1 943 615 2 ENSG00000261689.1 AGGF1P4 chr16 35389203 35390003 - processed_pseudogene KNOWN OTTHUMG00000176252.1 801 801 1 ENSG00000260598.1 RP11-80F22.13 chr16 35405747 35407349 - unprocessed_pseudogene KNOWN OTTHUMG00000175999.1 1603 781 4 ENSG00000260812.1 RARRES2P7 chr16 35414279 35414747 - processed_pseudogene KNOWN OTTHUMG00000176000.1 469 469 1 ENSG00000260680.1 RP11-80F22.1 chr16 35420291 35421209 + processed_pseudogene KNOWN OTTHUMG00000176001.1 919 919 1 ENSG00000261299.1 RP11-80F22.11 chr16 35425364 35426483 + processed_pseudogene KNOWN OTTHUMG00000176002.1 1120 1120 1 ENSG00000266094.5 RASSF5 chr1 206507530 206589283 + protein_coding KNOWN OTTHUMG00000184616.1 81754 6654 30 ENSG00000278681.1 RP11-80F22.16 chr16 35436162 35436304 - unprocessed_pseudogene KNOWN OTTHUMG00000187978.1 143 143 1 ENSG00000214581.4 RP11-80F22.10 chr16 35446898 35449024 - transcribed_processed_pseudogene KNOWN OTTHUMG00000176003.1 2127 1596 3 ENSG00000261711.5 FRG2DP chr16 35477414 35480481 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000176004.3 3068 1850 9 ENSG00000260153.1 RP11-80F22.7 chr16 35485766 35486225 - processed_pseudogene KNOWN OTTHUMG00000176005.1 460 460 1 ENSG00000259836.1 RP11-80F22.5 chr16 35489237 35490212 + processed_pseudogene KNOWN OTTHUMG00000176006.1 976 976 1 ENSG00000261350.1 RP11-80F22.14 chr16 35491174 35492395 - lincRNA NOVEL OTTHUMG00000176007.1 1222 480 2 ENSG00000260341.1 RP11-80F22.6 chr16 35492324 35493446 + processed_pseudogene KNOWN OTTHUMG00000176008.1 1123 1123 1 ENSG00000261445.1 RP11-80F22.4 chr16 35493754 35496457 - lincRNA NOVEL OTTHUMG00000176009.1 2704 572 3 ENSG00000260857.2 RP11-80F22.15 chr16 35505093 35506462 - lincRNA NOVEL OTTHUMG00000183202.1 1370 459 2 ENSG00000269622.1 RP11-80F22.2 chr16 35506592 35507170 - transcribed_processed_pseudogene KNOWN OTTHUMG00000176011.2 579 579 2 ENSG00000234981.1 RP11-534L20.4 chr1 206528915 206529706 + processed_pseudogene KNOWN OTTHUMG00000036340.1 792 792 1 ENSG00000261733.1 RP11-80F22.8 chr16 35529122 35529317 - processed_pseudogene KNOWN OTTHUMG00000176012.1 196 196 1 ENSG00000259996.1 RARRES2P8 chr16 35543279 35543645 - processed_pseudogene KNOWN OTTHUMG00000176013.1 367 367 1 ENSG00000260994.1 RP11-14K3.3 chr16 35547917 35548829 + processed_pseudogene KNOWN OTTHUMG00000176014.1 913 913 1 ENSG00000261046.1 RP11-14K3.4 chr16 35552909 35554001 + processed_pseudogene KNOWN OTTHUMG00000176015.1 1093 1093 1 ENSG00000260134.1 RP11-14K3.2 chr16 35574834 35575494 + processed_pseudogene KNOWN OTTHUMG00000176017.1 661 661 1 ENSG00000260746.1 RP11-14K3.1 chr16 35638623 35645180 - unprocessed_pseudogene KNOWN OTTHUMG00000176018.1 6558 2755 7 ENSG00000259791.1 RP11-14K3.7 chr16 35640029 35640582 + lincRNA NOVEL OTTHUMG00000176019.1 554 554 1 ENSG00000260522.1 RP11-352B15.5 chr16 35722268 35722529 - processed_pseudogene KNOWN OTTHUMG00000176020.1 262 262 1 ENSG00000251915.1 RNA5SP406 chr16 35734393 35734504 + rRNA KNOWN NA 112 112 1 ENSG00000222207.1 RNA5SP407 chr16 35734639 35734748 + rRNA KNOWN NA 110 110 1 ENSG00000279946.1 CH17-76K2.6 chr1 206541758 206544892 + TEC KNOWN OTTHUMG00000184618.1 3135 3135 1 ENSG00000251924.1 RNA5SP408 chr16 35735372 35735471 + rRNA KNOWN NA 100 100 1 ENSG00000252624.1 RNA5SP409 chr16 35735625 35735733 + rRNA KNOWN NA 109 109 1 ENSG00000261122.5 FLJ26245 chr16 35743268 35756515 + lincRNA NOVEL OTTHUMG00000176021.1 13248 1989 10 ENSG00000252094.1 RNA5SP410 chr16 35745989 35746094 + rRNA KNOWN NA 106 106 1 ENSG00000276599.1 5S_rRNA chr16 35746523 35746636 + rRNA NOVEL NA 114 114 1 ENSG00000277004.1 5S_rRNA chr16 35746772 35746894 + rRNA NOVEL NA 123 123 1 ENSG00000252182.1 RNA5SP413 chr16 35747032 35747140 + rRNA KNOWN NA 109 109 1 ENSG00000274228.1 5S_rRNA chr16 35748520 35748655 + rRNA NOVEL NA 136 136 1 ENSG00000253055.1 RNA5SP415 chr16 35750061 35750175 + rRNA KNOWN NA 115 115 1 ENSG00000252647.1 RNA5SP416 chr16 35751574 35751684 + rRNA KNOWN NA 111 111 1 ENSG00000143486.14 EIF2D chr1 206571292 206612463 - protein_coding KNOWN OTTHUMG00000184619.1 41172 8064 72 ENSG00000252268.1 RNA5SP417 chr16 35751828 35751935 + rRNA KNOWN NA 108 108 1 ENSG00000251760.1 RNA5SP418 chr16 35752826 35752942 + rRNA KNOWN NA 117 117 1 ENSG00000251717.1 RNA5SP419 chr16 35753796 35753930 + rRNA KNOWN NA 135 135 1 ENSG00000252806.1 RNA5SP420 chr16 35754046 35754182 + rRNA KNOWN NA 137 137 1 ENSG00000252673.1 RNA5SP421 chr16 35754555 35754688 + rRNA KNOWN NA 134 134 1 ENSG00000252587.1 RNA5SP422 chr16 35754923 35755033 + rRNA KNOWN NA 111 111 1 ENSG00000252936.1 RNA5SP423 chr16 35755177 35755285 + rRNA KNOWN NA 109 109 1 ENSG00000260611.1 RP11-352B15.2 chr16 35785569 35786887 - lincRNA NOVEL OTTHUMG00000176022.1 1319 1319 1 ENSG00000261620.1 HMGN2P41 chr16 35802869 35803280 - processed_pseudogene KNOWN OTTHUMG00000176023.1 412 412 1 ENSG00000261515.1 VN1R70P chr16 35836886 35837732 + processed_pseudogene KNOWN OTTHUMG00000176024.1 847 847 1 ENSG00000236179.1 RP13-221M14.4 chr1 13104403 13105689 - unprocessed_pseudogene KNOWN OTTHUMG00000009502.2 1287 891 2 ENSG00000237605.1 RP11-343H5.6 chr1 206634649 206635622 - antisense NOVEL OTTHUMG00000036345.1 974 358 2 ENSG00000261782.1 RP11-43P5.1 chr16 35879036 35879498 - processed_pseudogene KNOWN OTTHUMG00000176025.1 463 463 1 ENSG00000279666.1 RP11-43P5.3 chr16 35903117 35904916 + TEC KNOWN OTTHUMG00000176026.1 1800 1800 1 ENSG00000261084.1 PPP1R1AP2 chr16 35912120 35912516 + processed_pseudogene KNOWN OTTHUMG00000176027.1 397 397 1 ENSG00000261239.5 ANKRD26P1 chr16 46469341 46569097 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000175593.3 99757 6411 46 ENSG00000199448.1 RNU6-845P chr16 46556089 46556191 - snRNA KNOWN NA 103 103 1 ENSG00000261356.2 RP11-46D6.5 chr16 46571537 46572136 + processed_pseudogene KNOWN OTTHUMG00000175594.3 600 600 1 ENSG00000260251.1 RP11-46D6.4 chr16 46573763 46575094 + unprocessed_pseudogene KNOWN OTTHUMG00000175595.1 1332 733 2 ENSG00000171241.7 SHCBP1 chr16 46580554 46621626 - protein_coding KNOWN OTTHUMG00000132540.3 41073 4459 36 ENSG00000261512.2 RP11-46D6.1 chr16 46622861 46624451 - lincRNA NOVEL OTTHUMG00000175597.2 1591 1591 3 ENSG00000259856.1 RAB43P1 chr16 46626404 46626992 - processed_pseudogene KNOWN OTTHUMG00000175598.2 589 589 1 ENSG00000143479.14 DYRK3 chr1 206635536 206684419 + protein_coding KNOWN OTTHUMG00000036339.1 48884 4218 19 ENSG00000260909.1 RP11-93O14.1 chr16 46649126 46649849 + unprocessed_pseudogene KNOWN OTTHUMG00000175599.1 724 398 2 ENSG00000069329.14 VPS35 chr16 46656132 46689518 - protein_coding KNOWN OTTHUMG00000132542.5 33387 9733 69 ENSG00000261131.1 RP11-93O14.2 chr16 46660696 46661591 - sense_intronic NOVEL OTTHUMG00000175600.1 896 321 2 ENSG00000280376.1 RP11-93O14.3 chr16 46673443 46673927 - TEC KNOWN OTTHUMG00000177887.1 485 485 1 ENSG00000091651.7 ORC6 chr16 46689643 46698394 + protein_coding KNOWN OTTHUMG00000132539.4 8752 4309 47 ENSG00000140795.11 MYLK3 chr16 46703369 46790407 - protein_coding KNOWN OTTHUMG00000132543.5 87039 9522 44 ENSG00000260782.1 RP11-480G7.2 chr16 46789898 46792040 + processed_pseudogene KNOWN OTTHUMG00000175602.1 2143 1836 2 ENSG00000155330.8 C16orf87 chr16 46796607 46831411 - protein_coding KNOWN OTTHUMG00000132538.2 34805 7443 16 ENSG00000260889.1 CKBP1 chr16 46842632 46844618 - processed_pseudogene KNOWN OTTHUMG00000175603.1 1987 1086 2 ENSG00000261725.1 RP11-480G7.3 chr16 46850999 46851254 + processed_pseudogene KNOWN OTTHUMG00000175604.1 256 256 1 ENSG00000162889.9 MAPKAPK2 chr1 206684944 206734283 + protein_coding KNOWN OTTHUMG00000036342.1 49340 4195 24 ENSG00000166123.12 GPT2 chr16 46884378 46931297 + protein_coding KNOWN OTTHUMG00000132541.3 46920 6354 38 ENSG00000069345.10 DNAJA2 chr16 46955362 46973788 - protein_coding KNOWN OTTHUMG00000133104.7 18427 5065 24 ENSG00000261173.1 RP11-169E6.1 chr16 46973989 46978983 + antisense NOVEL OTTHUMG00000175605.1 4995 516 2 ENSG00000259821.1 RP11-169E6.4 chr16 47004513 47035385 + lincRNA NOVEL OTTHUMG00000175607.1 30873 744 3 ENSG00000259983.1 RP11-169E6.3 chr16 47013957 47014365 + transcribed_processed_pseudogene KNOWN OTTHUMG00000175608.1 409 409 1 ENSG00000171208.8 NETO2 chr16 47077703 47143997 - protein_coding KNOWN OTTHUMG00000133101.3 66295 7481 29 ENSG00000260281.4 ITFG1-AS1 chr16 47144323 47162747 + antisense NOVEL OTTHUMG00000175527.1 18425 626 9 ENSG00000239840.1 RPL23AP72 chr16 47150132 47150566 - processed_pseudogene KNOWN OTTHUMG00000158136.1 435 435 1 ENSG00000129636.11 ITFG1 chr16 47154387 47464149 - protein_coding KNOWN OTTHUMG00000133103.5 309763 7770 105 ENSG00000260744.1 RP11-329J18.3 chr16 47196311 47202429 + antisense NOVEL OTTHUMG00000175528.1 6119 764 2 ENSG00000224114.1 RP11-343H5.4 chr1 206695837 206696269 - processed_pseudogene KNOWN OTTHUMG00000036341.2 433 433 1 ENSG00000279509.1 RP11-329J18.5 chr16 47218026 47218768 + TEC KNOWN OTTHUMG00000177890.1 743 743 1 ENSG00000260012.1 RP11-329J18.4 chr16 47262741 47263500 + processed_pseudogene KNOWN OTTHUMG00000175529.1 760 760 1 ENSG00000261369.1 RP11-474B12.1 chr16 47299447 47317814 + antisense NOVEL OTTHUMG00000175530.1 18368 870 3 ENSG00000222767.1 Y_RNA chr16 47313027 47313121 - misc_RNA NOVEL NA 95 95 1 ENSG00000212290.1 RNA5SP424 chr16 47450347 47450461 - rRNA KNOWN NA 115 115 1 ENSG00000102893.14 PHKB chr16 47461123 47701523 + protein_coding KNOWN OTTHUMG00000133102.4 240401 11822 164 ENSG00000222268.1 RNA5SP425 chr16 47505432 47505543 + rRNA KNOWN NA 112 112 1 ENSG00000262038.1 RP11-177N22.3 chr16 47529190 47529916 + sense_intronic NOVEL OTTHUMG00000177891.1 727 493 2 ENSG00000259866.1 RP11-177N22.2 chr16 47561307 47562480 - processed_pseudogene KNOWN OTTHUMG00000175531.1 1174 1174 1 ENSG00000261336.1 EIF4BP5 chr16 47565090 47566884 - processed_pseudogene KNOWN OTTHUMG00000175532.1 1795 1795 1 ENSG00000199349.1 Y_RNA chr1 206747980 206748092 - misc_RNA NOVEL NA 113 113 1 ENSG00000259918.1 NDUFA5P11 chr16 47598654 47598996 - processed_pseudogene KNOWN OTTHUMG00000175533.1 343 343 1 ENSG00000261231.5 RP11-523L20.2 chr16 47724568 47908431 + lincRNA NOVEL OTTHUMG00000175450.1 183864 3019 9 ENSG00000260497.1 CTB-55P19.1 chr16 47760780 47760921 - processed_pseudogene KNOWN OTTHUMG00000175448.1 142 142 1 ENSG00000261325.1 AC140542.2 chr16 47849314 47887130 - lincRNA NOVEL OTTHUMG00000175449.1 37817 1325 2 ENSG00000260450.1 RP11-523L20.1 chr16 47965672 47971687 + lincRNA NOVEL OTTHUMG00000175451.1 6016 557 3 ENSG00000261017.1 RP11-3M1.3 chr16 48059671 48059995 - processed_pseudogene KNOWN OTTHUMG00000175440.1 325 325 1 ENSG00000140798.14 ABCC12 chr16 48082973 48156018 - protein_coding KNOWN OTTHUMG00000133143.2 73046 7456 201 ENSG00000261538.1 RP11-3M1.1 chr16 48164952 48167238 - sense_overlapping NOVEL OTTHUMG00000175441.1 2287 426 3 ENSG00000121270.14 ABCC11 chr16 48166910 48247568 - protein_coding KNOWN OTTHUMG00000133146.3 80659 7245 155 ENSG00000102910.12 LONP2 chr16 48244296 48363122 + protein_coding KNOWN OTTHUMG00000133144.7 118827 9957 76 ENSG00000136634.5 IL10 chr1 206767602 206772494 - protein_coding KNOWN OTTHUMG00000036386.4 4893 1978 10 ENSG00000240793.1 UBA52P8 chr16 48334471 48334854 - processed_pseudogene KNOWN OTTHUMG00000158140.1 384 384 1 ENSG00000280067.1 CTD-2600H12.2 chr16 48343755 48346058 - TEC KNOWN OTTHUMG00000175416.1 2304 2304 1 ENSG00000196470.10 SIAH1 chr16 48356364 48448402 - protein_coding KNOWN OTTHUMG00000175417.13 92039 6725 22 ENSG00000239138.1 AC023818.1 chr16 48421127 48421203 - miRNA NOVEL NA 77 77 1 ENSG00000275909.1 Metazoa_SRP chr16 48432927 48433208 - misc_RNA NOVEL NA 282 282 1 ENSG00000261802.1 RP11-44I10.6 chr16 48447904 48448398 - sense_overlapping NOVEL OTTHUMG00000175418.1 495 308 2 ENSG00000260688.1 RP11-44I10.5 chr16 48470953 48471133 - processed_pseudogene KNOWN OTTHUMG00000175419.1 181 181 1 ENSG00000260347.1 MOCS1P1 chr16 48496990 48498601 + processed_pseudogene KNOWN OTTHUMG00000175420.1 1612 1612 1 ENSG00000102921.6 N4BP1 chr16 48538726 48620148 - protein_coding KNOWN OTTHUMG00000175421.2 81423 7839 23 ENSG00000261267.1 RP11-44I10.3 chr16 48559661 48587403 + antisense NOVEL OTTHUMG00000175422.1 27743 438 3 ENSG00000142224.14 IL19 chr1 206798870 206842981 + protein_coding KNOWN OTTHUMG00000036387.4 44112 2587 22 ENSG00000243609.1 RPS2P44 chr16 48577524 48578369 - processed_pseudogene KNOWN OTTHUMG00000175442.1 846 846 1 ENSG00000260033.1 CTC-527H23.1 chr16 48600176 48600644 + processed_pseudogene KNOWN OTTHUMG00000173495.1 469 469 1 ENSG00000259912.1 CTC-527H23.2 chr16 48620319 48622033 + lincRNA NOVEL OTTHUMG00000174454.1 1715 306 2 ENSG00000260086.2 RP11-42I10.1 chr16 48623436 48744921 + lincRNA NOVEL OTTHUMG00000174455.2 121486 1921 10 ENSG00000260052.1 CTC-527H23.3 chr16 48637143 48638719 + lincRNA NOVEL OTTHUMG00000174456.1 1577 539 2 ENSG00000272545.1 CTC-527H23.4 chr16 48640473 48641052 + lincRNA NOVEL OTTHUMG00000185451.1 580 580 1 ENSG00000220993.1 AC007611.1 chr16 48651331 48651423 + miRNA NOVEL NA 93 93 1 ENSG00000260726.2 KLF8P1 chr16 48718083 48719143 + processed_pseudogene KNOWN OTTHUMG00000174457.2 1061 1061 1 ENSG00000222170.1 RNU6-257P chr16 48731704 48731801 - snRNA KNOWN NA 98 98 1 ENSG00000260184.1 RP11-42I10.3 chr16 48849919 48850015 - processed_pseudogene KNOWN OTTHUMG00000174458.1 97 97 1 ENSG00000162891.9 IL20 chr1 206865354 206869223 + protein_coding KNOWN OTTHUMG00000036456.1 3870 1567 15 ENSG00000260067.1 RP11-98C8.1 chr16 49066567 49066729 - processed_pseudogene KNOWN OTTHUMG00000176681.1 163 163 1 ENSG00000261421.1 RP11-22D3.1 chr16 49159508 49162023 + lincRNA NOVEL OTTHUMG00000173480.1 2516 418 2 ENSG00000261815.1 RP11-22D3.2 chr16 49170552 49171786 + lincRNA NOVEL OTTHUMG00000173481.1 1235 1235 1 ENSG00000102924.10 CBLN1 chr16 49277917 49281831 - protein_coding KNOWN OTTHUMG00000133148.4 3915 2594 9 ENSG00000260614.1 RP11-491F9.1 chr16 49287430 49290227 + antisense NOVEL OTTHUMG00000173483.1 2798 654 3 ENSG00000259957.2 RP11-491F9.8 chr16 49294886 49296736 + lincRNA NOVEL OTTHUMG00000176682.2 1851 1851 1 ENSG00000280189.1 RP11-491F9.2 chr16 49297143 49299762 + TEC KNOWN OTTHUMG00000173484.2 2620 2620 1 ENSG00000259839.1 RP11-491F9.6 chr16 49336683 49337345 + lincRNA NOVEL OTTHUMG00000173485.1 663 309 2 ENSG00000260769.1 RP11-491F9.5 chr16 49337167 49338993 + lincRNA NOVEL OTTHUMG00000173486.1 1827 1827 1 ENSG00000279249.1 RP11-491F9.3 chr16 49341663 49350554 + TEC KNOWN OTTHUMG00000173487.1 8892 8892 1 ENSG00000162892.14 IL24 chr1 206897443 206904139 + protein_coding KNOWN OTTHUMG00000036459.2 6697 1979 39 ENSG00000166152.3 C16orf78 chr16 49373823 49399431 + protein_coding KNOWN OTTHUMG00000133149.1 25609 1068 5 ENSG00000262950.1 RP11-189E14.5 chr16 49442910 49454078 - lincRNA NOVEL OTTHUMG00000173488.1 11169 674 4 ENSG00000263110.1 RP11-189E14.3 chr16 49454229 49457269 + lincRNA NOVEL OTTHUMG00000173489.1 3041 571 2 ENSG00000261623.1 RP11-189E14.4 chr16 49466106 49469875 + lincRNA NOVEL OTTHUMG00000173490.2 3770 3673 2 ENSG00000102935.10 ZNF423 chr16 49487524 49857919 - protein_coding KNOWN OTTHUMG00000173491.3 370396 8997 54 ENSG00000260089.2 ADAM3B chr16 49517762 49518601 - processed_pseudogene KNOWN OTTHUMG00000173492.2 840 840 1 ENSG00000221134.1 AC007339.1 chr16 49679220 49679301 + miRNA NOVEL NA 82 82 1 ENSG00000276695.1 AC007339.2 chr16 49680190 49680274 + miRNA NOVEL NA 85 85 1 ENSG00000260024.1 MRPS21P7 chr16 49708006 49708243 + processed_pseudogene KNOWN OTTHUMG00000173442.1 238 238 1 ENSG00000280131.1 CTD-2595P9.2 chr16 49711273 49711914 + TEC KNOWN OTTHUMG00000173443.1 642 642 1 ENSG00000162894.10 FAIM3 chr1 206904386 206923247 - protein_coding KNOWN OTTHUMG00000036457.4 18862 2348 48 ENSG00000259978.1 MRPS21P8 chr16 49764454 49764688 + processed_pseudogene KNOWN OTTHUMG00000173444.1 235 235 1 ENSG00000265708.1 AC027348.1 chr16 49816685 49816784 + miRNA NOVEL NA 100 100 1 ENSG00000275155.1 CTD-2595P9.4 chr16 49847018 49847632 - sense_intronic NOVEL OTTHUMG00000186926.1 615 615 1 ENSG00000279842.1 RP11-305A4.2 chr16 49900019 49900524 + TEC KNOWN OTTHUMG00000173445.1 506 506 1 ENSG00000261751.1 RP11-305A4.3 chr16 49920730 49924154 - lincRNA NOVEL OTTHUMG00000173446.1 3425 2085 2 ENSG00000244551.2 RPL34P29 chr16 49935028 49935352 + processed_pseudogene KNOWN OTTHUMG00000173493.1 325 325 1 ENSG00000205423.10 CNEP1R1 chr16 50024410 50037088 + protein_coding KNOWN OTTHUMG00000173447.1 12679 4178 57 ENSG00000259843.2 RP11-429P3.3 chr16 50046429 50066224 - antisense NOVEL OTTHUMG00000173448.2 19796 498 3 ENSG00000261835.1 RP11-429P3.2 chr16 50046496 50047798 + unprocessed_pseudogene KNOWN OTTHUMG00000173449.1 1303 934 2 ENSG00000273829.1 Metazoa_SRP chr16 50054143 50054430 + misc_RNA NOVEL NA 288 288 1 ENSG00000275774.2 HNRNPCL2 chr1 13115496 13116854 - protein_coding NOVEL OTTHUMG00000009503.4 1359 1148 2 ENSG00000271680.1 RP11-564A8.8 chr1 206905928 206906393 + processed_pseudogene KNOWN OTTHUMG00000184466.1 466 466 1 ENSG00000260298.2 RP11-429P3.4 chr16 50058150 50059231 - transcribed_processed_pseudogene KNOWN OTTHUMG00000173450.2 1082 1082 1 ENSG00000155393.11 HEATR3 chr16 50065941 50106387 + protein_coding KNOWN OTTHUMG00000133174.3 40447 4183 31 ENSG00000279356.1 RP11-429P3.8 chr16 50072862 50074986 + TEC KNOWN OTTHUMG00000177901.1 2125 2125 1 ENSG00000202124.1 RNY4P3 chr16 50098264 50098358 + misc_RNA KNOWN NA 95 95 1 ENSG00000260381.2 RP11-429P3.5 chr16 50100339 50121943 - antisense NOVEL OTTHUMG00000173451.1 21605 666 3 ENSG00000260031.1 RPL10P14 chr16 50151280 50151577 - processed_pseudogene KNOWN OTTHUMG00000158143.2 298 298 1 ENSG00000252526.1 SNORA70 chr16 50151642 50151731 - snoRNA NOVEL NA 90 90 1 ENSG00000121274.11 PAPD5 chr16 50152918 50235310 + protein_coding KNOWN OTTHUMG00000173452.3 82393 8144 47 ENSG00000121281.11 ADCY7 chr16 50246137 50318135 + protein_coding KNOWN OTTHUMG00000133172.5 71999 8630 139 ENSG00000274969.1 MIR6771 chr16 50292616 50292675 + miRNA KNOWN NA 60 60 1 ENSG00000226945.1 RP11-564A8.4 chr1 206907619 206908229 + processed_pseudogene KNOWN OTTHUMG00000036458.1 611 611 1 ENSG00000166164.14 BRD7 chr16 50313487 50368934 - protein_coding KNOWN OTTHUMG00000133170.4 55448 8492 58 ENSG00000261393.1 RP11-21B23.1 chr16 50368580 50371480 + antisense NOVEL OTTHUMG00000173392.1 2901 478 2 ENSG00000261092.1 RP11-21B23.2 chr16 50390916 50395133 - lincRNA NOVEL OTTHUMG00000173393.1 4218 425 2 ENSG00000260573.1 RP11-21B23.3 chr16 50407701 50408513 + lincRNA NOVEL OTTHUMG00000173394.1 813 517 2 ENSG00000140807.5 NKD1 chr16 50548330 50640739 + protein_coding KNOWN OTTHUMG00000133169.5 92410 8915 20 ENSG00000260029.2 RP11-401P9.1 chr16 50551824 50553940 - antisense NOVEL OTTHUMG00000173396.2 2117 1146 2 ENSG00000278909.1 RP11-401P9.7 chr16 50555355 50558719 + TEC KNOWN OTTHUMG00000173397.1 3365 3365 1 ENSG00000205414.1 RP11-401P9.6 chr16 50606076 50613684 - antisense NOVEL OTTHUMG00000173398.1 7609 2469 2 ENSG00000261685.2 RP11-401P9.4 chr16 50645809 50649249 + lincRNA NOVEL OTTHUMG00000173400.2 3441 3441 1 ENSG00000260249.2 RP11-401P9.5 chr16 50666211 50671639 + antisense NOVEL OTTHUMG00000173401.2 5429 5275 5 ENSG00000162896.5 PIGR chr1 206928518 206946466 - protein_coding KNOWN OTTHUMG00000036581.1 17949 4376 15 ENSG00000167208.13 SNX20 chr16 50666300 50681353 - protein_coding KNOWN OTTHUMG00000133173.2 15054 5754 22 ENSG00000167207.10 NOD2 chr16 50693603 50733077 + protein_coding KNOWN OTTHUMG00000133171.5 39475 5747 45 ENSG00000270120.1 RP11-327F22.6 chr16 50712844 50713589 + sense_intronic NOVEL OTTHUMG00000184115.1 746 746 1 ENSG00000261644.1 RP11-327F22.2 chr16 50735713 50740716 - antisense NOVEL OTTHUMG00000173402.1 5004 1150 2 ENSG00000260929.1 RP11-327F22.1 chr16 50740910 50742815 - antisense NOVEL OTTHUMG00000173403.1 1906 640 2 ENSG00000083799.16 CYLD chr16 50742050 50801935 + protein_coding KNOWN OTTHUMG00000173404.3 59886 12954 166 ENSG00000264947.1 MIR3181 chr16 50742305 50742377 + miRNA KNOWN NA 73 73 1 ENSG00000260616.5 RP11-327F22.4 chr16 50783859 50803338 - antisense NOVEL OTTHUMG00000173405.2 19480 814 5 ENSG00000261703.1 RP11-327F22.5 chr16 50806668 50807629 + lincRNA NOVEL OTTHUMG00000173406.1 962 352 2 ENSG00000260042.1 CTD-2034I21.1 chr16 50856614 50879278 - lincRNA NOVEL OTTHUMG00000173281.1 22665 981 2 ENSG00000162897.13 FCAMR chr1 206957965 206970625 - protein_coding KNOWN OTTHUMG00000036579.3 12661 3541 45 ENSG00000199771.1 RNA5SP426 chr16 50869455 50869575 - rRNA KNOWN NA 121 121 1 ENSG00000263082.1 CTD-2034I21.2 chr16 50880209 50884101 + lincRNA NOVEL OTTHUMG00000173282.2 3893 2248 2 ENSG00000261241.4 RP11-883G14.1 chr16 50884209 50901061 + lincRNA NOVEL OTTHUMG00000173283.2 16853 1181 8 ENSG00000261637.1 RP11-883G14.2 chr16 51017758 51035777 + lincRNA NOVEL OTTHUMG00000173284.1 18020 600 5 ENSG00000260605.1 RP11-883G14.3 chr16 51035118 51038764 - lincRNA NOVEL OTTHUMG00000173285.1 3647 584 4 ENSG00000260620.1 RP11-883G14.4 chr16 51054728 51056399 - lincRNA NOVEL OTTHUMG00000173286.1 1672 511 2 ENSG00000261282.1 SOD1P2 chr16 51107571 51108021 + processed_pseudogene KNOWN OTTHUMG00000173288.1 451 451 1 ENSG00000103449.10 SALL1 chr16 51135975 51151367 - protein_coding KNOWN OTTHUMG00000133176.2 15393 5660 13 ENSG00000261238.1 AC009166.5 chr16 51149239 51149819 + antisense NOVEL OTTHUMG00000173290.1 581 487 2 ENSG00000280344.1 AC009166.7 chr16 51176066 51178898 + TEC KNOWN OTTHUMG00000176149.1 2833 2833 1 ENSG00000123843.11 C4BPB chr1 207006845 207099993 + protein_coding KNOWN OTTHUMG00000036035.7 93149 3248 49 ENSG00000261047.1 AC137527.2 chr16 51244054 51244123 + processed_pseudogene KNOWN OTTHUMG00000173248.2 70 70 1 ENSG00000260818.2 UNGP1 chr16 51277852 51279112 + processed_pseudogene KNOWN OTTHUMG00000176689.2 1261 1261 1 ENSG00000260850.1 RP11-437L7.1 chr16 51354456 51356532 - lincRNA NOVEL OTTHUMG00000173249.1 2077 456 2 ENSG00000224578.4 HNRNPA1P48 chr16 51645756 51647132 + transcribed_processed_pseudogene KNOWN OTTHUMG00000173250.1 1377 1377 2 ENSG00000223168.1 RN7SKP142 chr16 51671236 51671563 - misc_RNA KNOWN NA 328 328 1 ENSG00000260057.4 LINC01571 chr16 51762519 51773173 + lincRNA NOVEL OTTHUMG00000173251.1 10655 955 6 ENSG00000261190.4 C16orf97 chr16 52005487 52078474 - processed_transcript KNOWN OTTHUMG00000173232.3 72988 2968 25 ENSG00000261470.1 RP11-152O14.4 chr16 52078622 52080489 + antisense NOVEL OTTHUMG00000173233.1 1868 471 2 ENSG00000279779.1 RP11-152O14.3 chr16 52081568 52082096 - TEC KNOWN OTTHUMG00000173234.1 529 529 1 ENSG00000260268.4 LINC00919 chr16 52083065 52085109 - lincRNA NOVEL OTTHUMG00000173235.1 2045 1658 5 ENSG00000182795.12 C1orf116 chr1 207018521 207032756 - protein_coding KNOWN OTTHUMG00000036580.2 14236 5502 7 ENSG00000261749.2 RP11-152O14.1 chr16 52085280 52099067 + lincRNA NOVEL OTTHUMG00000173236.2 13788 1010 3 ENSG00000260975.1 RP11-142G1.3 chr16 52198012 52227956 - lincRNA NOVEL OTTHUMG00000173237.1 29945 559 2 ENSG00000260478.1 RP11-142G1.1 chr16 52238082 52269440 + lincRNA NOVEL OTTHUMG00000173238.1 31359 630 5 ENSG00000221515.1 AC007333.1 chr16 52255451 52255549 - miRNA NOVEL NA 99 99 1 ENSG00000260887.2 CASC22 chr16 52258564 52280638 + lincRNA KNOWN OTTHUMG00000173239.2 22075 1076 6 ENSG00000279427.1 RP11-132F7.2 chr16 52436772 52437474 - TEC KNOWN OTTHUMG00000177924.1 703 703 1 ENSG00000103460.15 TOX3 chr16 52438005 52547802 - protein_coding KNOWN OTTHUMG00000173222.3 109798 5031 25 ENSG00000249231.6 CASC16 chr16 52552090 52652105 - lincRNA NOVEL OTTHUMG00000173223.2 100016 1552 11 ENSG00000260963.1 RP11-297L17.2 chr16 52607349 52613908 + lincRNA NOVEL OTTHUMG00000173224.1 6560 1137 8 ENSG00000260393.1 RP11-297L17.3 chr16 52607762 52608158 - lincRNA NOVEL OTTHUMG00000173225.1 397 286 2 ENSG00000123836.13 PFKFB2 chr1 207034366 207081024 + protein_coding KNOWN OTTHUMG00000036033.2 46659 10197 79 ENSG00000261261.2 RP11-297L17.4 chr16 52622115 52631088 + lincRNA NOVEL OTTHUMG00000173226.2 8974 1430 6 ENSG00000234337.4 RP11-297L17.6 chr16 52655307 52656045 + processed_pseudogene KNOWN OTTHUMG00000173227.1 739 739 1 ENSG00000260326.1 RP11-467J12.1 chr16 52934813 52935635 + processed_pseudogene KNOWN OTTHUMG00000173183.1 823 823 1 ENSG00000260258.2 RP11-467J12.2 chr16 52942139 52943464 + transcribed_processed_pseudogene KNOWN OTTHUMG00000173184.3 1326 1326 2 ENSG00000260939.1 RP11-467J12.3 chr16 53010395 53011286 - processed_pseudogene KNOWN OTTHUMG00000173185.1 892 892 1 ENSG00000261550.1 RP11-467J12.4 chr16 53035690 53052873 - antisense NOVEL OTTHUMG00000173186.1 17184 464 3 ENSG00000277639.1 RP11-295M3.4 chr16 53043066 53044216 - lincRNA NOVEL OTTHUMG00000186928.1 1151 1151 1 ENSG00000177200.14 CHD9 chr16 53055033 53329150 + protein_coding KNOWN OTTHUMG00000173188.4 274118 16502 322 ENSG00000261291.1 RP11-295M3.2 chr16 53168522 53169450 + sense_intronic NOVEL OTTHUMG00000173190.1 929 510 2 ENSG00000279018.1 AC007906.1 chr16 53207941 53226385 - protein_coding NOVEL NA 18445 871 4 ENSG00000180667.9 YOD1 chr1 207043849 207052980 - protein_coding KNOWN OTTHUMG00000036032.2 9132 6521 6 ENSG00000280227.1 RP11-454F8.3 chr16 53227146 53227694 + TEC KNOWN OTTHUMG00000177925.1 549 549 1 ENSG00000261056.2 RP11-454F8.2 chr16 53298224 53299792 + transcribed_processed_pseudogene KNOWN OTTHUMG00000173191.2 1569 1569 1 ENSG00000279589.1 RP11-454F8.4 chr16 53310797 53311989 + TEC KNOWN OTTHUMG00000177926.1 1193 1193 1 ENSG00000238645.1 snoU13 chr16 53334562 53334664 + snoRNA NOVEL NA 103 103 1 ENSG00000202193.1 RNA5SP427 chr16 53337453 53337571 + rRNA KNOWN NA 119 119 1 ENSG00000259962.1 RP11-44F14.4 chr16 53362019 53363678 - unprocessed_pseudogene KNOWN OTTHUMG00000173192.2 1660 395 4 ENSG00000260078.3 RP11-44F14.1 chr16 53364982 53373083 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000173193.2 8102 4322 8 ENSG00000261804.1 RP11-44F14.2 chr16 53373493 53384745 + lincRNA NOVEL OTTHUMG00000173195.1 11253 1106 5 ENSG00000262714.1 RP11-44F14.8 chr16 53386944 53389085 + lincRNA NOVEL OTTHUMG00000176690.2 2142 2142 1 ENSG00000279741.1 RP11-44F14.9 chr16 53389886 53390563 + TEC KNOWN OTTHUMG00000177940.1 678 678 1 ENSG00000123838.9 C4BPA chr1 207104262 207144972 + protein_coding KNOWN OTTHUMG00000036173.4 40711 2441 22 ENSG00000280027.1 RP11-44F14.10 chr16 53391089 53392473 + TEC KNOWN OTTHUMG00000177941.1 1385 1385 1 ENSG00000103479.13 RBL2 chr16 53433977 53491649 + protein_coding KNOWN OTTHUMG00000133198.5 57673 7320 89 ENSG00000252569.1 RNU6-1153P chr16 53443228 53443332 - snRNA KNOWN NA 105 105 1 ENSG00000259926.1 RP11-44F14.5 chr16 53448748 53449590 + sense_intronic NOVEL OTTHUMG00000173213.1 843 706 2 ENSG00000279344.1 RP11-44F14.7 chr16 53478957 53481550 - TEC KNOWN OTTHUMG00000173214.1 2594 2594 1 ENSG00000279722.1 RP11-44F14.6 chr16 53487607 53489943 - TEC KNOWN OTTHUMG00000173215.1 2337 2337 1 ENSG00000166971.15 AKTIP chr16 53491040 53504411 - protein_coding KNOWN OTTHUMG00000133199.4 13372 5202 77 ENSG00000103494.11 RPGRIP1L chr16 53597683 53703938 - protein_coding KNOWN OTTHUMG00000173125.3 106256 12857 163 ENSG00000275191.1 RP11-36I17.2 chr16 53628256 53628816 - sense_intronic NOVEL OTTHUMG00000186930.1 561 561 1 ENSG00000140718.17 FTO chr16 53703963 54121941 + protein_coding KNOWN OTTHUMG00000158780.4 417979 12723 39 ENSG00000275392.1 RP11-164O23.8 chr1 207127010 207127486 - antisense NOVEL OTTHUMG00000186516.1 477 477 1 ENSG00000261630.1 RP11-357N13.3 chr16 53981229 53981912 - antisense NOVEL OTTHUMG00000173127.1 684 547 2 ENSG00000280392.1 RP11-357N13.6 chr16 53991012 53994454 + TEC KNOWN OTTHUMG00000176692.1 3443 3443 1 ENSG00000260194.1 RP11-357N13.2 chr16 53998313 53999969 - antisense NOVEL OTTHUMG00000173129.1 1657 739 2 ENSG00000261049.2 RP11-357N13.1 chr16 54033997 54054583 - antisense NOVEL OTTHUMG00000173130.1 20587 281 3 ENSG00000260936.1 FTO-IT1 chr16 54039393 54040726 + sense_intronic NOVEL OTTHUMG00000173131.1 1334 1223 2 ENSG00000280454.1 AC007347.1 chr16 54114697 54114878 - pseudogene NOVEL NA 182 180 2 ENSG00000275147.1 RP11-324D17.3 chr16 54152855 54153448 + lincRNA NOVEL OTTHUMG00000186931.1 594 594 1 ENSG00000259759.1 RP11-324D17.2 chr16 54239693 54240654 + lincRNA NOVEL OTTHUMG00000172229.2 962 451 2 ENSG00000259517.2 RP11-324D17.1 chr16 54245618 54270746 - lincRNA NOVEL OTTHUMG00000172230.3 25129 540 3 ENSG00000177508.11 IRX3 chr16 54283304 54286763 - protein_coding KNOWN OTTHUMG00000133200.4 3460 2911 9 ENSG00000229978.1 RP13-221M14.3 chr1 13128818 13131615 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000009501.3 2798 1452 5 ENSG00000226565.1 RP11-164O23.5 chr1 207150177 207150281 - processed_pseudogene KNOWN OTTHUMG00000036187.1 105 105 1 ENSG00000277559.1 RP11-434E6.4 chr16 54290965 54292422 + lincRNA NOVEL OTTHUMG00000186932.1 1458 1458 1 ENSG00000261803.1 RP11-434E6.2 chr16 54366007 54370699 - lincRNA NOVEL OTTHUMG00000173086.1 4693 2051 4 ENSG00000261171.1 RP11-1136G4.1 chr16 54847247 54848233 - lincRNA NOVEL OTTHUMG00000173133.1 987 420 2 ENSG00000273615.1 RP11-1136G4.2 chr16 54851640 54852733 - lincRNA NOVEL OTTHUMG00000186933.1 1094 1094 1 ENSG00000245694.7 CRNDE chr16 54918863 54929189 - lincRNA KNOWN OTTHUMG00000172236.2 10327 2250 38 ENSG00000176842.13 IRX5 chr16 54930862 54934485 + protein_coding KNOWN OTTHUMG00000133201.2 3624 2845 15 ENSG00000259711.1 CTD-3032H12.2 chr16 54934913 54954665 + lincRNA NOVEL OTTHUMG00000172237.1 19753 359 2 ENSG00000259725.1 CTD-3032H12.1 chr16 54937786 54938671 - lincRNA NOVEL OTTHUMG00000172238.1 886 778 4 ENSG00000260147.1 CTD-3032H12.3 chr16 55007982 55008306 + processed_pseudogene KNOWN OTTHUMG00000173134.1 325 325 1 ENSG00000259283.2 RP11-26L20.3 chr16 55259969 55333588 - antisense NOVEL OTTHUMG00000172240.2 73620 763 4 ENSG00000224462.2 C4BPAP1 chr1 207165496 207183910 + unprocessed_pseudogene KNOWN OTTHUMG00000036251.1 18415 1893 11 ENSG00000239555.3 RN7SL841P chr16 55291379 55291675 - misc_RNA KNOWN NA 297 297 1 ENSG00000159387.7 IRX6 chr16 55323760 55330760 + protein_coding KNOWN OTTHUMG00000172239.4 7001 3399 11 ENSG00000263207.2 RP11-26L20.4 chr16 55332355 55332967 + lincRNA NOVEL OTTHUMG00000177968.2 613 613 1 ENSG00000240760.1 RPL31P56 chr16 55352721 55353088 - processed_pseudogene KNOWN OTTHUMG00000158145.1 368 368 1 ENSG00000087245.11 MMP2 chr16 55389700 55506691 + protein_coding KNOWN OTTHUMG00000133202.4 116992 4933 70 ENSG00000274508.1 RP11-212I21.5 chr16 55425574 55426130 - lincRNA NOVEL OTTHUMG00000186936.1 557 557 1 ENSG00000260135.5 RP11-212I21.2 chr16 55426797 55462297 - lincRNA NOVEL OTTHUMG00000176716.2 35501 1515 11 ENSG00000279030.1 RP11-212I21.3 chr16 55486618 55488777 + TEC KNOWN OTTHUMG00000177969.1 2160 2160 1 ENSG00000087253.10 LPCAT2 chr16 55508998 55586670 + protein_coding KNOWN OTTHUMG00000133238.3 77673 7439 54 ENSG00000261997.1 RP11-212I21.4 chr16 55538200 55542027 + lincRNA NOVEL OTTHUMG00000177970.1 3828 3828 1 ENSG00000243636.1 RP11-164O23.7 chr1 207179296 207184062 + lincRNA NOVEL OTTHUMG00000036253.1 4767 945 4 ENSG00000256812.1 CAPNS2 chr16 55566672 55567687 + protein_coding KNOWN OTTHUMG00000167812.1 1016 1016 1 ENSG00000103546.17 SLC6A2 chr16 55655604 55706192 + protein_coding KNOWN OTTHUMG00000133208.5 50589 5463 108 ENSG00000278928.1 RP11-481F24.3 chr16 55704119 55706422 + TEC KNOWN OTTHUMG00000177971.1 2304 2304 1 ENSG00000260765.2 CES1P2 chr16 55728115 55750111 + unprocessed_pseudogene KNOWN OTTHUMG00000176717.2 21997 1242 11 ENSG00000228695.8 CES1P1 chr16 55760548 55794158 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000154668.2 33611 3411 31 ENSG00000198848.11 CES1 chr16 55802851 55833337 - protein_coding KNOWN OTTHUMG00000176718.3 30487 2937 68 ENSG00000159398.14 CES5A chr16 55846154 55956031 - protein_coding KNOWN OTTHUMG00000133236.8 109878 3204 99 ENSG00000246379.5 RP11-461O7.1 chr16 56092987 56191094 - lincRNA NOVEL OTTHUMG00000176719.1 98108 4021 13 ENSG00000279523.1 RP11-461O7.2 chr16 56108980 56109970 + TEC KNOWN OTTHUMG00000176720.1 991 991 1 ENSG00000260041.4 RP11-355E10.1 chr16 56109537 56137000 + lincRNA NOVEL OTTHUMG00000176721.1 27464 834 6 ENSG00000232621.1 C4BPAP2 chr1 207225798 207229202 + unprocessed_pseudogene KNOWN OTTHUMG00000036252.1 3405 478 3 ENSG00000261013.1 CTD-2050B12.1 chr16 56183726 56186306 - lincRNA NOVEL OTTHUMG00000176722.1 2581 795 2 ENSG00000087258.12 GNAO1 chr16 56191390 56357444 + protein_coding KNOWN OTTHUMG00000133241.6 166055 9813 44 ENSG00000261439.1 DKFZP434H168 chr16 56192614 56194518 - antisense NOVEL OTTHUMG00000176968.1 1905 1905 1 ENSG00000265281.1 MIR3935 chr16 56245520 56245623 + miRNA KNOWN NA 104 104 1 ENSG00000260198.1 RP11-441F2.2 chr16 56300616 56302904 + sense_intronic NOVEL OTTHUMG00000176970.1 2289 1777 2 ENSG00000279764.1 RP11-441F2.4 chr16 56306845 56308335 + TEC KNOWN OTTHUMG00000176971.1 1491 1491 1 ENSG00000272372.1 RP11-441F2.5 chr16 56351886 56353524 - antisense NOVEL OTTHUMG00000185480.1 1639 1639 1 ENSG00000159461.13 AMFR chr16 56361452 56425538 - protein_coding KNOWN OTTHUMG00000133239.4 64087 5758 59 ENSG00000260621.1 RP11-413H22.2 chr16 56409320 56411683 + antisense NOVEL OTTHUMG00000176983.1 2364 549 2 ENSG00000167005.12 NUDT21 chr16 56429133 56452199 - protein_coding KNOWN OTTHUMG00000133240.4 23067 5954 24 ENSG00000237074.1 RP11-6J21.2 chr1 207249067 207309121 + lincRNA NOVEL OTTHUMG00000036254.1 60055 917 4 ENSG00000087263.15 OGFOD1 chr16 56451490 56479100 + protein_coding KNOWN OTTHUMG00000133237.3 27611 5806 71 ENSG00000274031.1 RP11-413H22.3 chr16 56465642 56466162 - antisense NOVEL OTTHUMG00000186939.1 521 521 1 ENSG00000125124.10 BBS2 chr16 56466836 56520283 - protein_coding KNOWN OTTHUMG00000176943.7 53448 8337 126 ENSG00000102891.3 MT4 chr16 56565049 56568957 + protein_coding KNOWN OTTHUMG00000176863.1 3909 294 3 ENSG00000280654.1 U7 chr16 56574401 56574462 + snRNA NOVEL NA 62 62 1 ENSG00000087250.7 MT3 chr16 56589074 56591088 + protein_coding KNOWN OTTHUMG00000133282.3 2015 1837 16 ENSG00000125148.6 MT2A chr16 56608199 56609497 + protein_coding KNOWN OTTHUMG00000133281.2 1299 1299 11 ENSG00000260823.1 RP11-249C24.10 chr16 56609501 56611375 - lincRNA NOVEL OTTHUMG00000176939.1 1875 444 2 ENSG00000260549.1 MT1L chr16 56617476 56618818 + unitary_pseudogene KNOWN OTTHUMG00000176212.2 1343 411 5 ENSG00000169715.13 MT1E chr16 56625475 56627112 + protein_coding KNOWN OTTHUMG00000133014.2 1638 1052 7 ENSG00000196352.12 CD55 chr1 207321508 207360966 + protein_coding KNOWN OTTHUMG00000036255.3 39459 4056 81 ENSG00000205364.3 MT1M chr16 56632233 56633986 + protein_coding KNOWN OTTHUMG00000176938.1 1754 942 5 ENSG00000255986.5 MT1JP chr16 56635739 56637086 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000176920.2 1348 1001 8 ENSG00000205362.9 MT1A chr16 56638666 56750276 + protein_coding KNOWN OTTHUMG00000176919.1 111611 418 7 ENSG00000205361.7 MT1DP chr16 56643705 56644786 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000158354.2 1082 191 6 ENSG00000205360.6 MT1CP chr16 56648248 56649514 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000176918.1 1267 174 3 ENSG00000259923.1 RP11-249C24.11 chr16 56648881 56652636 + processed_transcript NOVEL OTTHUMG00000176941.1 3756 244 3 ENSG00000169688.10 MT1B chr16 56651899 56653204 + protein_coding KNOWN OTTHUMG00000133277.3 1306 380 6 ENSG00000198417.6 MT1F chr16 56657694 56660698 + protein_coding KNOWN OTTHUMG00000176838.3 3005 1889 9 ENSG00000125144.12 MT1G chr16 56666731 56668065 - protein_coding KNOWN OTTHUMG00000133275.2 1335 750 10 ENSG00000205358.3 MT1H chr16 56669814 56671129 + protein_coding KNOWN OTTHUMG00000133283.2 1316 723 5 ENSG00000274245.1 RP11-357P18.2 chr1 207372559 207373252 + lincRNA NOVEL OTTHUMG00000186517.1 694 694 1 ENSG00000275691.1 RP11-249C24.12 chr16 56676132 56677763 + protein_coding NOVEL OTTHUMG00000186942.1 1632 242 3 ENSG00000187193.8 MT1X chr16 56682424 56684196 + protein_coding KNOWN OTTHUMG00000133280.6 1773 1773 9 ENSG00000259827.1 RP11-343H19.2 chr16 56682470 56687807 + processed_transcript NOVEL OTTHUMG00000176837.2 5338 551 3 ENSG00000261429.2 DPPA2P4 chr16 56686851 56688052 + processed_pseudogene KNOWN OTTHUMG00000176801.2 1202 878 2 ENSG00000261302.4 RP11-343H19.1 chr16 56708772 56729968 - antisense NOVEL OTTHUMG00000176549.1 21197 1201 6 ENSG00000102900.11 NUP93 chr16 56730105 56850286 + protein_coding KNOWN OTTHUMG00000133278.10 120182 11136 158 ENSG00000207649.2 MIR138-2 chr16 56858507 56858616 + miRNA KNOWN NA 110 110 1 ENSG00000274182.1 AC012181.2 chr16 56864952 56865012 + miRNA NOVEL NA 61 61 1 ENSG00000070915.8 SLC12A3 chr16 56865207 56915850 + protein_coding KNOWN OTTHUMG00000133284.2 50644 6180 108 ENSG00000243988.1 RPS24P17 chr16 56906534 56906956 + processed_pseudogene KNOWN OTTHUMG00000158147.1 423 423 1 ENSG00000117322.15 CR2 chr1 207454230 207489895 + protein_coding KNOWN OTTHUMG00000036307.2 35666 4885 66 ENSG00000051108.13 HERPUD1 chr16 56932048 56944863 + protein_coding KNOWN OTTHUMG00000133276.8 12816 5155 91 ENSG00000261270.1 RP11-325K4.3 chr16 56940278 56941342 + sense_intronic NOVEL OTTHUMG00000176494.1 1065 601 2 ENSG00000261114.1 RP11-325K4.2 chr16 56941028 56941726 + sense_intronic NOVEL OTTHUMG00000176493.1 699 699 1 ENSG00000263441.1 AC012181.1 chr16 56957265 56957361 + miRNA NOVEL NA 97 97 1 ENSG00000087237.9 CETP chr16 56961850 56983845 + protein_coding KNOWN OTTHUMG00000133279.2 21996 2085 56 ENSG00000140853.14 NLRC5 chr16 56989485 57083531 + protein_coding KNOWN OTTHUMG00000133470.4 94047 12386 480 ENSG00000259922.1 RP11-322D14.1 chr16 57013071 57014100 - processed_pseudogene KNOWN OTTHUMG00000175514.1 1030 1030 1 ENSG00000260145.1 RP11-322D14.2 chr16 57052505 57058497 - antisense NOVEL OTTHUMG00000175515.1 5993 672 2 ENSG00000260148.1 RP11-407G23.1 chr16 57091213 57092303 - antisense NOVEL OTTHUMG00000175516.1 1091 472 2 ENSG00000140848.15 CPNE2 chr16 57092537 57148367 + protein_coding KNOWN OTTHUMG00000133471.4 55831 7781 82 ENSG00000203710.9 CR1 chr1 207496147 207640647 + protein_coding KNOWN OTTHUMG00000036311.11 144501 11465 289 ENSG00000279019.1 RP11-407G23.2 chr16 57140896 57144586 - TEC KNOWN OTTHUMG00000175517.1 3691 3691 1 ENSG00000279803.1 RP11-407G23.5 chr16 57142652 57144936 + TEC KNOWN OTTHUMG00000176659.1 2285 2285 1 ENSG00000172775.15 FAM192A chr16 57152466 57186116 - protein_coding KNOWN OTTHUMG00000176660.5 33651 4347 111 ENSG00000159579.12 RSPRY1 chr16 57186137 57240475 + protein_coding KNOWN OTTHUMG00000133462.5 54339 6064 74 ENSG00000102931.6 ARL2BP chr16 57245098 57253635 + protein_coding KNOWN OTTHUMG00000133459.3 8538 2155 19 ENSG00000276663.1 RP11-407G23.7 chr16 57245832 57246396 - antisense NOVEL OTTHUMG00000186945.1 565 565 1 ENSG00000260038.1 RP11-407G23.4 chr16 57247350 57248492 + sense_intronic NOVEL OTTHUMG00000176605.1 1143 358 2 ENSG00000102934.8 PLLP chr16 57248547 57284687 - protein_coding KNOWN OTTHUMG00000133465.4 36141 8720 17 ENSG00000260965.1 CTC-661I16.1 chr16 57321352 57322117 + processed_pseudogene KNOWN OTTHUMG00000175519.1 766 455 2 ENSG00000271456.1 CTC-661I16.2 chr16 57332379 57332599 - processed_pseudogene KNOWN OTTHUMG00000184818.1 221 221 1 ENSG00000236911.5 RP11-78B10.2 chr1 207551925 207606555 - antisense NOVEL OTTHUMG00000041089.3 54631 1506 15 ENSG00000102962.4 CCL22 chr16 57358772 57366190 + protein_coding KNOWN OTTHUMG00000133454.1 7419 2929 3 ENSG00000006210.6 CX3CL1 chr16 57372458 57385048 + protein_coding KNOWN OTTHUMG00000133469.5 12591 5983 10 ENSG00000102970.9 CCL17 chr16 57404767 57416062 + protein_coding KNOWN OTTHUMG00000133468.1 11296 620 7 ENSG00000005194.13 CIAPIN1 chr16 57428169 57447528 - protein_coding KNOWN OTTHUMG00000133457.6 19360 3509 91 ENSG00000088682.12 COQ9 chr16 57447425 57461275 + protein_coding KNOWN OTTHUMG00000176582.3 13851 4324 81 ENSG00000260345.1 AC009052.12 chr16 57461055 57462737 + processed_transcript NOVEL OTTHUMG00000176595.1 1683 298 2 ENSG00000102978.11 POLR2C chr16 57462387 57472010 + protein_coding KNOWN OTTHUMG00000133464.3 9624 3940 46 ENSG00000125170.9 DOK4 chr16 57471922 57487327 - protein_coding KNOWN OTTHUMG00000133460.7 15406 4788 94 ENSG00000135736.5 CCDC102A chr16 57512178 57536599 - protein_coding KNOWN OTTHUMG00000133472.2 24422 2582 12 ENSG00000159618.14 GPR114 chr16 57542421 57591681 + protein_coding KNOWN OTTHUMG00000133461.5 49261 5852 58 ENSG00000233336.1 RP13-221M14.2 chr1 13146981 13147460 - lincRNA NOVEL OTTHUMG00000009500.2 480 384 2 ENSG00000197721.15 CR1L chr1 207645113 207738416 + protein_coding KNOWN OTTHUMG00000036354.6 93304 2768 37 ENSG00000260828.1 HMGB3P32 chr16 57603137 57603697 + processed_pseudogene KNOWN OTTHUMG00000176434.1 561 561 1 ENSG00000205336.10 GPR56 chr16 57610652 57665580 + protein_coding KNOWN OTTHUMG00000176742.20 54929 8659 394 ENSG00000261633.1 RP11-405F3.5 chr16 57622034 57631647 - antisense NOVEL OTTHUMG00000176792.1 9614 556 4 ENSG00000182885.15 GPR97 chr16 57668187 57689378 + protein_coding KNOWN OTTHUMG00000133458.2 21192 3330 52 ENSG00000260467.1 RP11-405F3.4 chr16 57681124 57701730 - antisense NOVEL OTTHUMG00000176793.1 20607 804 6 ENSG00000159625.13 DRC7 chr16 57694793 57731805 + protein_coding KNOWN OTTHUMG00000133473.4 37013 5151 85 ENSG00000260438.1 RP11-405F3.2 chr16 57713782 57714957 + processed_pseudogene KNOWN OTTHUMG00000176435.1 1176 811 2 ENSG00000140854.11 KATNB1 chr16 57735730 57757250 + protein_coding KNOWN OTTHUMG00000133467.5 21521 4591 86 ENSG00000140859.14 KIFC3 chr16 57758217 57863053 - protein_coding KNOWN OTTHUMG00000133455.17 104837 9600 279 ENSG00000276166.1 CTD-2600O9.2 chr16 57759358 57760024 + antisense NOVEL OTTHUMG00000186949.1 667 667 1 ENSG00000244703.3 CD46P1 chr1 207645234 207657410 + unprocessed_pseudogene KNOWN OTTHUMG00000036355.1 12177 763 5 ENSG00000274816.1 MIR6772 chr16 57772289 57772352 - miRNA KNOWN NA 64 64 1 ENSG00000187185.4 CTD-2600O9.1 chr16 57798186 57816946 + lincRNA NOVEL OTTHUMG00000176702.2 18761 2114 8 ENSG00000206833.1 RNU6-20P chr16 57830536 57830642 - snRNA KNOWN NA 107 107 1 ENSG00000265209.1 AC010543.1 chr16 57874384 57874530 - miRNA NOVEL NA 147 147 1 ENSG00000070729.12 CNGB1 chr16 57882340 57971116 - protein_coding KNOWN OTTHUMG00000154810.4 88777 7298 109 ENSG00000159648.10 TEPP chr16 57976435 57988116 + protein_coding KNOWN OTTHUMG00000133463.4 11682 3103 27 ENSG00000166188.2 ZNF319 chr16 57994668 58000453 - protein_coding KNOWN OTTHUMG00000175512.1 5786 4274 4 ENSG00000103005.10 USB1 chr16 57999546 58021618 + protein_coding KNOWN OTTHUMG00000133456.3 22073 8265 72 ENSG00000102996.4 MMP15 chr16 58025566 58046901 + protein_coding KNOWN OTTHUMG00000133466.2 21336 4419 12 ENSG00000207173.1 Y_RNA chr16 58083068 58083168 - misc_RNA NOVEL NA 101 101 1 ENSG00000226289.1 CDCA4P3 chr1 207658454 207659142 + unprocessed_pseudogene KNOWN OTTHUMG00000057673.1 689 689 1 ENSG00000261151.1 RP11-332G1.1 chr16 58092053 58092947 - processed_pseudogene KNOWN OTTHUMG00000175424.1 895 895 1 ENSG00000070761.6 CFAP20 chr16 58113588 58129450 - protein_coding KNOWN OTTHUMG00000133490.3 15863 2375 25 ENSG00000260545.1 CTB-134F13.1 chr16 58116885 58119353 + antisense NOVEL OTTHUMG00000173246.1 2469 415 2 ENSG00000260927.1 RP11-459F6.3 chr16 58129529 58159133 + antisense NOVEL OTTHUMG00000173247.1 29605 577 4 ENSG00000070770.7 CSNK2A2 chr16 58157907 58197920 - protein_coding KNOWN OTTHUMG00000133488.3 40014 6905 45 ENSG00000260867.1 RP11-459F6.1 chr16 58197112 58217805 + antisense NOVEL OTTHUMG00000173230.1 20694 330 2 ENSG00000240863.3 RN7SL645P chr16 58199568 58199836 - misc_RNA KNOWN NA 269 269 1 ENSG00000103021.8 CCDC113 chr16 58231157 58283836 + protein_coding KNOWN OTTHUMG00000133489.2 52680 5927 35 ENSG00000103023.10 PRSS54 chr16 58279997 58295047 - protein_coding KNOWN OTTHUMG00000173231.3 15051 2112 34 ENSG00000181938.12 GINS3 chr16 58295080 58406144 + protein_coding KNOWN OTTHUMG00000133486.4 111065 5105 26 ENSG00000274059.1 5S_rRNA chr1 207708898 207708981 - rRNA NOVEL NA 84 84 1 ENSG00000212379.1 RNU6-269P chr16 58378052 58378148 - snRNA KNOWN NA 97 97 1 ENSG00000261078.1 RP11-481J2.1 chr16 58382989 58383798 - antisense NOVEL OTTHUMG00000173228.1 810 374 2 ENSG00000252271.1 RNU6-1110P chr16 58384442 58384542 - snRNA KNOWN NA 101 101 1 ENSG00000276131.1 RP11-481J2.3 chr16 58392153 58392807 - antisense NOVEL OTTHUMG00000186952.2 655 655 1 ENSG00000260186.4 RP11-481J2.2 chr16 58421326 58462470 + lincRNA NOVEL OTTHUMG00000175407.1 41145 1776 10 ENSG00000103034.13 NDRG4 chr16 58462846 58513628 + protein_coding KNOWN OTTHUMG00000133485.17 50783 9647 405 ENSG00000200556.1 RNU6-103P chr16 58496908 58497014 + snRNA KNOWN NA 107 107 1 ENSG00000103037.10 SETD6 chr16 58515479 58521181 + protein_coding KNOWN OTTHUMG00000150276.5 5703 5078 72 ENSG00000125107.15 CNOT1 chr16 58519951 58629886 - protein_coding KNOWN OTTHUMG00000133487.9 109936 10852 274 ENSG00000276259.1 RP11-481J2.4 chr16 58522970 58523842 + antisense NOVEL OTTHUMG00000186956.1 873 873 1 ENSG00000117335.17 CD46 chr1 207752057 207795513 + protein_coding KNOWN OTTHUMG00000036397.14 43457 8708 153 ENSG00000207493.1 SNORA46 chr16 58548499 58548633 - snoRNA KNOWN NA 135 135 1 ENSG00000279816.1 AC010287.1 chr16 58554337 58554935 + protein_coding KNOWN NA 599 599 1 ENSG00000281910.1 SNORA76A chr16 58559796 58559931 - snoRNA KNOWN NA 136 136 1 ENSG00000206952.3 SNORA76A chr16 58559796 58559929 - snoRNA KNOWN NA 134 134 1 ENSG00000260865.1 CTA-331F8.1 chr16 58597589 58597945 - transcribed_processed_pseudogene KNOWN OTTHUMG00000173135.1 357 357 1 ENSG00000103042.7 SLC38A7 chr16 58665109 58685104 - protein_coding KNOWN OTTHUMG00000133491.6 19996 6991 99 ENSG00000279889.1 RP11-451N19.3 chr16 58705799 58706297 - TEC KNOWN OTTHUMG00000173047.1 499 499 1 ENSG00000125166.11 GOT2 chr16 58707131 58734357 - protein_coding KNOWN OTTHUMG00000133769.4 27227 3766 40 ENSG00000245768.5 RP11-410D17.2 chr16 58733912 59108974 + lincRNA NOVEL OTTHUMG00000173082.2 375063 2665 10 ENSG00000200424.1 RNU6-1155P chr16 58744251 58744357 - snRNA KNOWN NA 107 107 1 ENSG00000234219.1 CDCA4P4 chr1 207762584 207763263 + unprocessed_pseudogene KNOWN OTTHUMG00000057675.1 680 680 1 ENSG00000244003.3 RN7SL143P chr16 58770524 58770820 + misc_RNA KNOWN NA 297 297 1 ENSG00000260451.1 GEMIN8P2 chr16 58776540 58777563 + processed_pseudogene KNOWN OTTHUMG00000172972.1 1024 700 2 ENSG00000242423.2 RP11-451N19.1 chr16 58825891 58826368 + processed_pseudogene KNOWN OTTHUMG00000158154.2 478 478 1 ENSG00000261638.1 RP11-700H13.1 chr16 58847807 58880213 - lincRNA NOVEL OTTHUMG00000173081.1 32407 552 5 ENSG00000275808.1 Metazoa_SRP chr16 59004213 59004494 + misc_RNA NOVEL NA 282 282 1 ENSG00000244043.1 RPS27P27 chr16 59088837 59089091 + processed_pseudogene KNOWN OTTHUMG00000158166.1 255 255 1 ENSG00000261144.1 RP11-102D18.1 chr16 59166951 59167152 - processed_pseudogene KNOWN OTTHUMG00000173083.1 202 202 1 ENSG00000200062.1 RNU4-58P chr16 59540126 59540266 + snRNA KNOWN NA 141 141 1 ENSG00000270222.1 RP11-105C20.3 chr16 59655602 59656336 + processed_pseudogene KNOWN OTTHUMG00000184807.1 735 526 2 ENSG00000260240.3 APOOP5 chr16 59709993 59755026 - transcribed_processed_pseudogene KNOWN OTTHUMG00000173108.3 45034 1307 10 ENSG00000203709.8 C1orf132 chr1 207801518 207869150 - lincRNA KNOWN OTTHUMG00000036553.2 67633 15645 8 ENSG00000261807.2 RP11-430C1.1 chr16 59855353 60053973 + lincRNA NOVEL OTTHUMG00000173092.3 198621 6586 4 ENSG00000261278.1 RP11-430C1.2 chr16 60024578 60025141 - processed_pseudogene KNOWN OTTHUMG00000173094.1 564 426 2 ENSG00000261590.1 RP11-457D20.1 chr16 60357214 60357474 + processed_pseudogene KNOWN OTTHUMG00000173090.1 261 261 1 ENSG00000278499.2 RP11-457D20.2 chr16 60358455 60359480 - protein_coding KNOWN OTTHUMG00000189254.1 1026 1026 1 ENSG00000261436.4 RP11-354I13.2 chr16 60359842 60442245 + lincRNA NOVEL OTTHUMG00000173088.1 82404 1054 8 ENSG00000265167.1 AC009081.1 chr16 60429648 60429733 - miRNA NOVEL NA 86 86 1 ENSG00000261310.1 RP11-354I13.1 chr16 60486819 60523250 - lincRNA NOVEL OTTHUMG00000173089.1 36432 565 3 ENSG00000259844.2 GNPATP chr16 60654235 60656649 - processed_pseudogene KNOWN OTTHUMG00000173087.2 2415 1980 2 ENSG00000265127.1 AC009080.1 chr16 60769979 60770083 + miRNA NOVEL NA 105 105 1 ENSG00000261178.2 RP11-90K18.1 chr16 60925733 60928541 - unprocessed_pseudogene KNOWN OTTHUMG00000175844.2 2809 1377 3 ENSG00000275668.1 AL035209.1 chr1 207801845 207801956 - miRNA NOVEL NA 112 112 1 ENSG00000224631.4 RP11-51O6.1 chr16 61055399 61055964 - transcribed_processed_pseudogene KNOWN OTTHUMG00000158168.2 566 566 2 ENSG00000150394.12 CDH8 chr16 61647242 62037035 - protein_coding KNOWN OTTHUMG00000137493.6 389794 13529 83 ENSG00000260600.1 RP11-109D24.1 chr16 61691756 61693750 - sense_intronic NOVEL OTTHUMG00000175403.1 1995 1995 1 ENSG00000201289.1 RN7SKP76 chr16 61743154 61743476 - misc_RNA KNOWN NA 323 323 1 ENSG00000260115.1 CTC-420A11.2 chr16 61918321 61940697 + antisense NOVEL OTTHUMG00000176319.1 22377 714 4 ENSG00000207441.1 RNU6-21P chr16 62187540 62187646 - snRNA KNOWN NA 107 107 1 ENSG00000280261.1 RP11-75D3.1 chr16 62342420 62342557 + TEC KNOWN OTTHUMG00000176305.1 138 138 1 ENSG00000237901.1 AC009161.1 chr16 62357371 62357746 + processed_pseudogene KNOWN OTTHUMG00000128479.1 376 376 1 ENSG00000231589.1 AC009110.1 chr16 62596372 62598449 + lincRNA NOVEL OTTHUMG00000150106.1 2078 558 2 ENSG00000222299.2 AC092116.1 chr16 62720824 62720914 - miRNA NOVEL NA 91 91 1 ENSG00000276752.1 MIR29B2 chr1 207802440 207802523 - miRNA KNOWN NA 84 84 1 ENSG00000260332.1 RP11-50O21.1 chr16 62808222 62808706 - processed_pseudogene KNOWN OTTHUMG00000177031.1 485 485 1 ENSG00000223123.1 AC010546.1 chr16 62825961 62826048 - miRNA NOVEL NA 88 88 1 ENSG00000261502.3 RP11-96H17.1 chr16 63056786 63129654 - processed_transcript NOVEL OTTHUMG00000177973.1 72869 3825 6 ENSG00000269986.1 RP11-96H17.3 chr16 63066526 63066990 - sense_intronic NOVEL OTTHUMG00000184074.1 465 465 1 ENSG00000261199.1 UBE2FP2 chr16 63180610 63181071 - processed_pseudogene KNOWN OTTHUMG00000177029.2 462 462 1 ENSG00000260658.4 RP11-368L12.1 chr16 63314264 63618046 - lincRNA NOVEL OTTHUMG00000176432.3 303783 813 9 ENSG00000241808.1 RPS15AP34 chr16 63350763 63351149 - processed_pseudogene KNOWN OTTHUMG00000158177.1 387 387 1 ENSG00000261743.1 RP11-2K6.2 chr16 63368844 63369456 + lincRNA NOVEL OTTHUMG00000177082.1 613 556 2 ENSG00000279225.1 RP11-2K6.1 chr16 63397707 63397946 + TEC KNOWN OTTHUMG00000177081.2 240 240 1 ENSG00000259864.1 RP11-370P15.1 chr16 63703483 63703665 + processed_pseudogene KNOWN OTTHUMG00000172799.1 183 183 1 ENSG00000226202.2 RP11-328D5.1 chr1 207873795 207879073 - lincRNA NOVEL OTTHUMG00000036552.2 5279 563 3 ENSG00000261014.1 RP11-370P15.2 chr16 63730277 63754757 + lincRNA NOVEL OTTHUMG00000175762.1 24481 443 4 ENSG00000261653.1 RP11-21L1.1 chr16 63935778 63936906 + lincRNA NOVEL OTTHUMG00000177083.1 1129 1129 1 ENSG00000260715.1 RP11-744D14.2 chr16 64155169 64156574 + lincRNA NOVEL OTTHUMG00000175763.1 1406 1406 1 ENSG00000261028.1 AC012322.1 chr16 64242608 64343909 - lincRNA NOVEL OTTHUMG00000172806.1 101302 861 5 ENSG00000260668.1 RP11-744D14.1 chr16 64260570 64261239 - processed_pseudogene KNOWN OTTHUMG00000172807.2 670 554 2 ENSG00000259846.1 RP11-467L24.1 chr16 64364781 64600247 + lincRNA NOVEL OTTHUMG00000172800.2 235467 548 5 ENSG00000259859.1 RP11-439I14.2 chr16 64735925 64736804 + lincRNA NOVEL OTTHUMG00000173310.1 880 456 2 ENSG00000260187.1 RP11-439I14.1 chr16 64736788 64737280 + transcribed_processed_pseudogene KNOWN OTTHUMG00000172808.1 493 493 1 ENSG00000260068.1 RP11-439I14.3 chr16 64738323 64738564 + processed_pseudogene KNOWN OTTHUMG00000176744.1 242 242 1 ENSG00000140937.12 CDH11 chr16 64943753 65126112 - protein_coding KNOWN OTTHUMG00000137494.5 182360 13381 85 ENSG00000179412.10 HNRNPCL4 chr1 13164586 13165467 - protein_coding NOVEL OTTHUMG00000189238.1 882 882 1 ENSG00000174059.15 CD34 chr1 207880972 207911402 - protein_coding KNOWN OTTHUMG00000036565.2 30431 9219 27 ENSG00000278893.1 RP11-229O3.1 chr16 64981123 64983227 - TEC KNOWN OTTHUMG00000176437.1 2105 2105 1 ENSG00000259847.1 RP11-95H3.1 chr16 65141756 65176713 - lincRNA NOVEL OTTHUMG00000172809.2 34958 890 6 ENSG00000260834.1 RP11-256I9.2 chr16 65190973 65234914 - lincRNA NOVEL OTTHUMG00000172810.2 43942 1464 6 ENSG00000260364.1 RP11-256I9.3 chr16 65233056 65432820 + lincRNA NOVEL OTTHUMG00000172811.2 199765 781 5 ENSG00000261742.4 LINC00922 chr16 65284499 65576300 - lincRNA NOVEL OTTHUMG00000172812.2 291802 2089 25 ENSG00000261818.1 RP11-351A20.1 chr16 65580668 65646947 + lincRNA NOVEL OTTHUMG00000173311.1 66280 428 3 ENSG00000260004.1 RP11-351A20.2 chr16 65601101 65601698 - lincRNA NOVEL OTTHUMG00000173312.1 598 472 2 ENSG00000260695.1 RP11-513N24.1 chr16 65861112 65863784 - lincRNA NOVEL OTTHUMG00000173313.1 2673 2673 1 ENSG00000261234.1 RP11-356O24.1 chr16 65938189 65938453 - processed_pseudogene KNOWN OTTHUMG00000173314.1 265 265 1 ENSG00000201999.1 RNA5SP428 chr16 66301809 66301940 + rRNA KNOWN NA 132 132 1 ENSG00000076356.6 PLXNA2 chr1 208022242 208244320 - protein_coding KNOWN OTTHUMG00000036564.6 222079 13781 44 ENSG00000179776.16 CDH5 chr16 66366622 66404786 + protein_coding KNOWN OTTHUMG00000137495.8 38165 5972 52 ENSG00000246898.1 LINC00920 chr16 66408524 66412135 + lincRNA NOVEL OTTHUMG00000175510.1 3612 2147 2 ENSG00000166546.12 BEAN1 chr16 66427297 66493529 + protein_coding KNOWN OTTHUMG00000173370.5 66233 7379 38 ENSG00000260146.1 CTD-2258A20.3 chr16 66450998 66451351 - processed_pseudogene KNOWN OTTHUMG00000173371.1 354 354 1 ENSG00000261656.4 BEAN1-AS1 chr16 66469796 66481230 - antisense NOVEL OTTHUMG00000175781.2 11435 1037 10 ENSG00000260851.5 RP11-403P17.5 chr16 66469812 66517312 - protein_coding KNOWN OTTHUMG00000176745.2 47501 843 10 ENSG00000166548.14 TK2 chr16 66508003 66552544 - protein_coding KNOWN OTTHUMG00000137499.9 44542 7169 160 ENSG00000260755.1 RP11-403P17.3 chr16 66509437 66510048 + lincRNA NOVEL OTTHUMG00000175782.1 612 511 2 ENSG00000261519.3 RP11-403P17.4 chr16 66549280 66551189 + lincRNA NOVEL OTTHUMG00000176438.1 1910 1910 1 ENSG00000275745.1 Y_RNA chr16 66550457 66550567 + misc_RNA NOVEL NA 111 111 1 ENSG00000226843.1 RP11-2P2.1 chr1 208255290 208255376 - processed_pseudogene KNOWN OTTHUMG00000036571.1 87 87 1 ENSG00000217555.11 CKLF chr16 66552563 66566251 + protein_coding KNOWN OTTHUMG00000137504.3 13689 1161 24 ENSG00000254788.5 CKLF-CMTM1 chr16 66552563 66579135 + protein_coding KNOWN OTTHUMG00000167106.1 26573 1437 20 ENSG00000277978.1 RP11-403P17.6 chr16 66565620 66566001 - antisense NOVEL OTTHUMG00000186957.1 382 382 1 ENSG00000089505.16 CMTM1 chr16 66566393 66579137 + protein_coding KNOWN OTTHUMG00000137502.5 12745 1465 78 ENSG00000140932.8 CMTM2 chr16 66579448 66588275 + protein_coding KNOWN OTTHUMG00000137501.3 8828 1151 13 ENSG00000260650.1 RP11-403P17.2 chr16 66579983 66580716 - antisense NOVEL OTTHUMG00000175511.1 734 555 2 ENSG00000140931.18 CMTM3 chr16 66603874 66613892 + protein_coding KNOWN OTTHUMG00000137503.7 10019 3163 69 ENSG00000183723.11 CMTM4 chr16 66614750 66696707 - protein_coding KNOWN OTTHUMG00000137500.4 81958 8117 19 ENSG00000135720.11 DYNC1LI2 chr16 66720893 66751798 - protein_coding KNOWN OTTHUMG00000137523.5 30906 8278 84 ENSG00000260465.1 RP11-63M22.2 chr16 66720897 66731785 + antisense NOVEL OTTHUMG00000173475.1 10889 1790 2 ENSG00000261453.1 RP11-565N2.1 chr1 208607100 208612192 - lincRNA NOVEL OTTHUMG00000036132.1 5093 279 2 ENSG00000260558.1 RP11-63M22.1 chr16 66738263 66739326 + lincRNA NOVEL OTTHUMG00000173476.1 1064 536 2 ENSG00000246777.1 RP11-61A14.4 chr16 66751752 66754740 + lincRNA NOVEL OTTHUMG00000173477.1 2989 2894 2 ENSG00000249961.8 CCDC79 chr16 66754976 66801620 - protein_coding KNOWN OTTHUMG00000133562.4 46645 3095 75 ENSG00000159593.13 NAE1 chr16 66802875 66873256 - protein_coding KNOWN OTTHUMG00000137513.6 70382 4810 175 ENSG00000258122.1 RP11-61A14.1 chr16 66841433 66853448 - antisense NOVEL OTTHUMG00000170125.1 12016 434 2 ENSG00000168748.12 CA7 chr16 66844379 66854153 + protein_coding KNOWN OTTHUMG00000137524.3 9775 1862 20 ENSG00000172840.5 PDP2 chr16 66878589 66895754 + protein_coding KNOWN OTTHUMG00000137512.6 17166 8364 23 ENSG00000166589.11 CDH16 chr16 66908122 66918984 - protein_coding KNOWN OTTHUMG00000137518.5 10863 3656 128 ENSG00000166592.10 RRAD chr16 66921679 66925644 - protein_coding KNOWN OTTHUMG00000137511.3 3966 1709 20 ENSG00000166595.10 FAM96B chr16 66932055 66934423 - protein_coding KNOWN OTTHUMG00000175408.3 2369 1070 28 ENSG00000259815.1 RP11-565N2.2 chr1 208626741 208628085 - lincRNA NOVEL OTTHUMG00000036134.1 1345 285 2 ENSG00000172831.10 CES2 chr16 66934444 66945096 + protein_coding KNOWN OTTHUMG00000137517.3 10653 5343 63 ENSG00000265408.1 RP11-361L15.4 chr16 66942712 66963256 + processed_transcript NOVEL OTTHUMG00000178323.1 20545 317 4 ENSG00000280416.1 RP11-361L15.3 chr16 66944660 66945096 - TEC KNOWN OTTHUMG00000176425.1 437 437 1 ENSG00000172828.11 CES3 chr16 66961237 66975148 + protein_coding KNOWN OTTHUMG00000137525.3 13912 4935 58 ENSG00000172824.13 CES4A chr16 66988589 67009758 + protein_coding KNOWN OTTHUMG00000167866.4 21170 4340 87 ENSG00000280334.1 RP11-361L15.5 chr16 67006672 67009481 - TEC KNOWN OTTHUMG00000178324.1 2810 2810 1 ENSG00000265918.2 RN7SL543P chr16 67019519 67019817 + misc_RNA KNOWN NA 299 299 1 ENSG00000281589.1 AC009084.1 chr16 67019727 67019811 + miRNA NOVEL NA 85 85 1 ENSG00000067955.12 CBFB chr16 67029116 67101058 + protein_coding KNOWN OTTHUMG00000137520.4 71943 4129 34 ENSG00000125149.10 C16orf70 chr16 67109958 67148539 + protein_coding KNOWN OTTHUMG00000137510.4 38582 5965 86 ENSG00000227887.1 RPS26P13 chr1 208697369 208697698 - processed_pseudogene KNOWN OTTHUMG00000036135.1 330 330 1 ENSG00000237172.3 B3GNT9 chr16 67148105 67151214 - protein_coding KNOWN OTTHUMG00000173315.1 3110 2917 2 ENSG00000102871.14 TRADD chr16 67154180 67160298 - protein_coding KNOWN OTTHUMG00000137519.3 6119 2567 15 ENSG00000135722.7 FBXL8 chr16 67159931 67164570 + protein_coding KNOWN OTTHUMG00000137514.3 4640 3130 27 ENSG00000265690.6 RP11-5A19.5 chr16 67163385 67165815 + protein_coding KNOWN OTTHUMG00000163737.3 2431 2009 14 ENSG00000102878.14 HSF4 chr16 67163385 67169945 + protein_coding KNOWN OTTHUMG00000178325.1 6561 4211 199 ENSG00000140939.13 NOL3 chr16 67170154 67175735 + protein_coding KNOWN OTTHUMG00000173316.2 5582 2992 44 ENSG00000196123.11 KIAA0895L chr16 67175602 67184040 - protein_coding KNOWN OTTHUMG00000172891.6 8439 4780 52 ENSG00000179044.14 EXOC3L1 chr16 67184366 67190204 - protein_coding KNOWN OTTHUMG00000137508.4 5839 3077 62 ENSG00000205250.7 E2F4 chr16 67192169 67198918 + protein_coding KNOWN OTTHUMG00000172975.2 6750 3582 63 ENSG00000102890.13 ELMO3 chr16 67199111 67204029 + protein_coding KNOWN OTTHUMG00000133570.3 4919 2575 74 ENSG00000232812.1 RP11-459K23.2 chr1 208728688 208733184 + lincRNA NOVEL OTTHUMG00000036136.1 4497 527 4 ENSG00000207948.2 MIR328 chr16 67202308 67202418 - miRNA KNOWN NA 111 111 1 ENSG00000280163.1 CTC-277H1.6 chr16 67205175 67206849 - TEC KNOWN OTTHUMG00000177483.1 1675 1675 1 ENSG00000125122.13 LRRC29 chr16 67207139 67227048 - protein_coding KNOWN OTTHUMG00000154403.1 19910 2807 45 ENSG00000168701.17 TMEM208 chr16 67227103 67229278 + protein_coding KNOWN OTTHUMG00000173064.2 2176 1787 47 ENSG00000135723.12 FHOD1 chr16 67229387 67247658 - protein_coding KNOWN OTTHUMG00000137521.4 18272 5407 76 ENSG00000135740.15 SLC9A5 chr16 67237683 67272190 + protein_coding KNOWN OTTHUMG00000172935.2 34508 5419 86 ENSG00000262691.1 CTC-277H1.7 chr16 67261108 67263784 + processed_transcript NOVEL OTTHUMG00000177484.1 2677 2677 1 ENSG00000196155.11 PLEKHG4 chr16 67277510 67289499 + protein_coding KNOWN OTTHUMG00000172936.2 11990 7328 141 ENSG00000168676.9 KCTD19 chr16 67289428 67326763 - protein_coding KNOWN OTTHUMG00000173075.2 37336 7383 82 ENSG00000201201.1 RN7SKP118 chr16 67321658 67321987 - misc_RNA KNOWN NA 330 330 1 ENSG00000236950.1 RP5-1051D14.1 chr1 208972454 208975307 + lincRNA NOVEL OTTHUMG00000036137.1 2854 595 2 ENSG00000159708.16 LRRC36 chr16 67326798 67385203 + protein_coding KNOWN OTTHUMG00000173030.2 58406 4017 122 ENSG00000159713.9 TPPP3 chr16 67389809 67393535 - protein_coding KNOWN OTTHUMG00000137516.3 3727 2618 18 ENSG00000239194.1 RNU1-123P chr16 67390691 67390850 - snRNA KNOWN NA 160 160 1 ENSG00000159714.9 ZDHHC1 chr16 67394419 67416833 - protein_coding KNOWN OTTHUMG00000137522.4 22415 3261 37 ENSG00000176387.6 HSD11B2 chr16 67430652 67437553 + protein_coding KNOWN OTTHUMG00000137507.5 6902 2674 14 ENSG00000261320.1 RP11-297D21.2 chr16 67430667 67431464 - lincRNA NOVEL OTTHUMG00000175505.1 798 475 2 ENSG00000159720.10 ATP6V0D1 chr16 67438014 67481237 - protein_coding KNOWN OTTHUMG00000137515.5 43224 8212 103 ENSG00000270049.1 RP11-297D21.4 chr16 67481314 67487250 + antisense NOVEL OTTHUMG00000184048.1 5937 1640 5 ENSG00000159723.4 AGRP chr16 67482571 67483813 - protein_coding KNOWN OTTHUMG00000137509.1 1243 764 4 ENSG00000276075.1 CTD-2012K14.8 chr16 67517862 67528675 - antisense NOVEL OTTHUMG00000186961.1 10814 883 4 ENSG00000278684.1 RP5-1051D14.2 chr1 209001338 209001476 + unprocessed_pseudogene KNOWN OTTHUMG00000187546.1 139 139 1 ENSG00000039523.16 FAM65A chr16 67518418 67546788 + protein_coding KNOWN OTTHUMG00000137536.6 28371 6729 216 ENSG00000261396.1 CTD-2012K14.2 chr16 67538557 67540106 - antisense NOVEL OTTHUMG00000172863.1 1550 530 3 ENSG00000259945.1 CTD-2012K14.3 chr16 67542123 67542963 - antisense NOVEL OTTHUMG00000172864.1 841 336 2 ENSG00000260894.1 CTD-2012K14.4 chr16 67542304 67542572 - antisense NOVEL OTTHUMG00000172865.1 269 207 2 ENSG00000261386.2 CTD-2012K14.6 chr16 67549214 67563958 - lincRNA NOVEL OTTHUMG00000172866.2 14745 1184 3 ENSG00000280214.1 CTD-2012K14.5 chr16 67550815 67552935 - TEC KNOWN OTTHUMG00000172867.1 2121 2121 1 ENSG00000259804.1 CTD-2012K14.7 chr16 67561411 67562309 - antisense NOVEL OTTHUMG00000172888.1 899 899 1 ENSG00000102974.13 CTCF chr16 67562407 67639183 + protein_coding KNOWN OTTHUMG00000137539.3 76777 4301 25 ENSG00000237718.2 AC009095.4 chr16 67614381 67616146 - antisense NOVEL OTTHUMG00000150496.2 1766 1326 2 ENSG00000159753.12 RLTPR chr16 67644919 67657569 + protein_coding NOVEL OTTHUMG00000184043.1 12651 7699 129 ENSG00000232537.1 RP11-385M4.1 chr1 209147267 209155101 - lincRNA NOVEL OTTHUMG00000036133.1 7835 473 3 ENSG00000102977.12 ACD chr16 67657512 67660815 - protein_coding KNOWN OTTHUMG00000137547.6 3304 3223 107 ENSG00000102981.8 PARD6A chr16 67660946 67662778 + protein_coding KNOWN OTTHUMG00000137534.2 1833 1488 11 ENSG00000124074.10 ENKD1 chr16 67662945 67667265 - protein_coding KNOWN OTTHUMG00000137550.4 4321 2679 30 ENSG00000159761.13 C16orf86 chr16 67666816 67668758 + protein_coding KNOWN OTTHUMG00000150527.3 1943 1789 18 ENSG00000141098.11 GFOD2 chr16 67674531 67719421 - protein_coding KNOWN OTTHUMG00000137537.5 44891 8674 18 ENSG00000141084.9 RANBP10 chr16 67723066 67806652 - protein_coding KNOWN OTTHUMG00000184044.4 83587 6460 95 ENSG00000270165.1 RP11-167P11.2 chr16 67738588 67739922 - sense_intronic NOVEL OTTHUMG00000184045.1 1335 569 2 ENSG00000102904.13 TSNAXIP1 chr16 67806765 67832148 + protein_coding KNOWN OTTHUMG00000137545.5 25384 3852 144 ENSG00000102901.11 CENPT chr16 67828157 67847811 - protein_coding KNOWN OTTHUMG00000173071.2 19655 5539 224 ENSG00000168286.2 THAP11 chr16 67842082 67844195 + protein_coding KNOWN OTTHUMG00000137546.1 2114 2114 1 ENSG00000204505.4 PRAMEF25 chr1 13172455 13179464 + protein_coding NOVEL OTTHUMG00000189239.1 7010 1863 4 ENSG00000228081.2 RP11-385M4.2 chr1 209173014 209173375 + processed_pseudogene KNOWN OTTHUMG00000036165.1 362 362 1 ENSG00000102898.10 NUTF2 chr16 67846732 67872567 + protein_coding KNOWN OTTHUMG00000137540.5 25836 3895 32 ENSG00000262141.1 CTC-479C5.11 chr16 67855955 67856111 - processed_pseudogene KNOWN OTTHUMG00000177515.1 157 157 1 ENSG00000038358.13 EDC4 chr16 67873023 67884503 + protein_coding KNOWN OTTHUMG00000137543.4 11481 6173 143 ENSG00000221526.1 AC040162.1 chr16 67877657 67877740 + miRNA NOVEL NA 84 84 1 ENSG00000263126.1 CTC-479C5.10 chr16 67882461 67886367 + lincRNA NOVEL OTTHUMG00000177492.1 3907 3907 1 ENSG00000188038.6 NRN1L chr16 67884805 67888855 + protein_coding KNOWN OTTHUMG00000137541.3 4051 1052 8 ENSG00000159792.8 PSKH1 chr16 67893272 67929678 + protein_coding KNOWN OTTHUMG00000137548.7 36407 3977 7 ENSG00000141086.16 CTRL chr16 67927640 67932414 - protein_coding KNOWN OTTHUMG00000137552.5 4775 2715 36 ENSG00000261884.2 CTC-479C5.12 chr16 67929614 67936017 - protein_coding NOVEL OTTHUMG00000177516.4 6404 5685 11 ENSG00000205220.10 PSMB10 chr16 67934502 67937087 - protein_coding KNOWN OTTHUMG00000137553.4 2586 1853 25 ENSG00000224540.1 RP11-385M4.3 chr1 209232196 209233419 + processed_pseudogene KNOWN OTTHUMG00000036166.1 1224 1224 1 ENSG00000213398.6 LCAT chr16 67939750 67944131 - protein_coding KNOWN OTTHUMG00000137551.4 4382 2625 35 ENSG00000124067.15 SLC12A4 chr16 67943474 67969601 - protein_coding KNOWN OTTHUMG00000137535.10 26128 8298 229 ENSG00000141096.4 DPEP3 chr16 67975663 67980829 - protein_coding KNOWN OTTHUMG00000137544.4 5167 2018 12 ENSG00000167261.12 DPEP2 chr16 67987394 68000586 - protein_coding KNOWN OTTHUMG00000137542.4 13193 3498 54 ENSG00000167264.16 DUS2 chr16 67987746 68079320 + protein_coding KNOWN OTTHUMG00000137538.5 91575 4472 129 ENSG00000262962.1 KARSP3 chr16 68002432 68004952 - unprocessed_pseudogene KNOWN OTTHUMG00000177459.1 2521 1504 4 ENSG00000263201.1 CTC-479C5.6 chr16 68013436 68015911 - antisense NOVEL OTTHUMG00000177460.1 2476 1185 2 ENSG00000202336.1 RNU6-359P chr16 68017710 68017817 - snRNA KNOWN NA 108 108 1 ENSG00000182810.6 DDX28 chr16 68021274 68023442 - protein_coding KNOWN OTTHUMG00000137549.1 2169 2169 1 ENSG00000221789.1 AC130462.1 chr16 68055779 68055884 - miRNA NOVEL NA 106 106 1 ENSG00000225712.1 ATP5G2P1 chr1 209267798 209268223 - processed_pseudogene KNOWN OTTHUMG00000036167.1 426 426 1 ENSG00000261864.1 RP11-67A1.2 chr16 68077340 68122271 + processed_transcript NOVEL OTTHUMG00000177442.1 44932 549 3 ENSG00000072736.17 NFATC3 chr16 68084751 68229259 + protein_coding KNOWN OTTHUMG00000137555.5 144509 8806 187 ENSG00000201850.1 Y_RNA chr16 68089449 68089543 - misc_RNA NOVEL NA 95 95 1 ENSG00000212445.1 SNORA48 chr16 68189287 68189421 + snoRNA NOVEL NA 135 135 1 ENSG00000262514.1 RP11-96D1.9 chr16 68199795 68200981 + sense_intronic NOVEL OTTHUMG00000177995.1 1187 1187 1 ENSG00000279621.1 RP11-67A1.4 chr16 68199841 68200981 - TEC KNOWN OTTHUMG00000177444.1 1141 1141 1 ENSG00000240435.2 RPS12P27 chr16 68209442 68209778 + processed_pseudogene KNOWN OTTHUMG00000158181.2 337 337 1 ENSG00000260891.1 RP11-96D1.5 chr16 68212401 68221671 - antisense NOVEL OTTHUMG00000176599.1 9271 460 2 ENSG00000263276.1 RP11-96D1.10 chr16 68224713 68227734 + sense_overlapping NOVEL OTTHUMG00000177996.1 3022 3022 1 ENSG00000262160.1 RP11-96D1.11 chr16 68225969 68229145 - antisense NOVEL OTTHUMG00000177997.1 3177 3177 1 ENSG00000227940.1 RP11-372M18.1 chr1 209325456 209328532 + lincRNA NOVEL OTTHUMG00000036265.1 3077 492 3 ENSG00000103067.10 ESRP2 chr16 68229111 68238102 - protein_coding KNOWN OTTHUMG00000137557.7 8992 5563 81 ENSG00000276151.1 MIR6773 chr16 68233426 68233499 - miRNA KNOWN NA 74 74 1 ENSG00000261469.1 RP11-96D1.6 chr16 68236845 68237667 - sense_intronic NOVEL OTTHUMG00000176679.1 823 533 2 ENSG00000103066.11 PLA2G15 chr16 68245304 68261062 + protein_coding KNOWN OTTHUMG00000137554.7 15759 4464 51 ENSG00000260441.4 RP11-96D1.7 chr16 68256162 68260443 - antisense NOVEL OTTHUMG00000176680.1 4282 490 5 ENSG00000103064.12 SLC7A6 chr16 68264516 68301823 + protein_coding KNOWN OTTHUMG00000176544.9 37308 7588 87 ENSG00000252026.1 RNU6-1262P chr16 68284223 68284318 - snRNA KNOWN NA 96 96 1 ENSG00000103061.10 SLC7A6OS chr16 68284503 68310951 - protein_coding KNOWN OTTHUMG00000137558.13 26449 5234 23 ENSG00000279649.1 RP11-96D1.8 chr16 68290087 68292790 - TEC KNOWN OTTHUMG00000177438.1 2704 2704 1 ENSG00000132600.15 PRMT7 chr16 68310974 68358563 + protein_coding KNOWN OTTHUMG00000137556.6 47590 9458 188 ENSG00000231648.1 RP11-372M18.2 chr1 209367662 209379690 + lincRNA NOVEL OTTHUMG00000036266.1 12029 892 7 ENSG00000259797.1 RP11-96D1.3 chr16 68316801 68319036 + sense_intronic NOVEL OTTHUMG00000176429.1 2236 428 2 ENSG00000222177.1 RNU4-30P chr16 68329387 68329529 - snRNA KNOWN NA 143 143 1 ENSG00000103056.10 SMPD3 chr16 68358325 68448688 - protein_coding KNOWN OTTHUMG00000137559.7 90364 7166 53 ENSG00000279693.1 RP11-71L14.3 chr16 68367325 68370262 - TEC KNOWN OTTHUMG00000177439.1 2938 2938 1 ENSG00000274698.1 RP11-71L14.4 chr16 68450283 68452318 + lincRNA NOVEL OTTHUMG00000177998.2 2036 2036 1 ENSG00000199263.1 Y_RNA chr16 68474553 68474664 - misc_RNA NOVEL NA 112 112 1 ENSG00000241334.2 RPL35AP33 chr16 68477237 68477570 - processed_pseudogene KNOWN OTTHUMG00000158185.3 334 334 1 ENSG00000184939.14 ZFP90 chr16 68530090 68576072 + protein_coding KNOWN OTTHUMG00000177312.7 45983 7015 79 ENSG00000201164.1 RNU4-36P chr16 68535515 68535658 + snRNA KNOWN NA 144 144 1 ENSG00000260084.1 RP11-615I2.1 chr16 68573782 68589512 - antisense NOVEL OTTHUMG00000176784.1 15731 547 2 ENSG00000230937.8 MIR205HG chr1 209428820 209432838 + processed_transcript KNOWN OTTHUMG00000036267.5 4019 3518 34 ENSG00000275383.1 RP11-615I2.6 chr16 68591382 68594424 + lincRNA NOVEL OTTHUMG00000177420.1 3043 3043 1 ENSG00000252040.1 snoU109 chr16 68630223 68630354 - snoRNA NOVEL NA 132 132 1 ENSG00000252640.1 snoU109 chr16 68630851 68630968 - snoRNA NOVEL NA 118 118 1 ENSG00000062038.12 CDH3 chr16 68636189 68722616 + protein_coding KNOWN OTTHUMG00000137560.5 86428 6236 71 ENSG00000260577.2 RP11-615I2.2 chr16 68644248 68646168 - antisense NOVEL OTTHUMG00000176785.2 1921 1682 2 ENSG00000260860.2 RP11-615I2.3 chr16 68651056 68651948 - processed_pseudogene KNOWN OTTHUMG00000176786.3 893 893 1 ENSG00000261395.3 HSPE1P5 chr16 68686399 68686670 + transcribed_processed_pseudogene KNOWN OTTHUMG00000176787.3 272 272 1 ENSG00000039068.17 CDH1 chr16 68737225 68835548 + protein_coding KNOWN OTTHUMG00000137561.5 98324 6177 141 ENSG00000200558.1 RNA5SP429 chr16 68742480 68742588 + rRNA KNOWN NA 109 109 1 ENSG00000281454.1 AC099314.1 chr16 68742495 68742551 + miRNA NOVEL NA 57 57 1 ENSG00000276335.1 MIR205 chr1 209432133 209432242 + miRNA KNOWN NA 110 110 1 ENSG00000260798.1 RP11-354M1.2 chr16 68814330 68823526 - antisense NOVEL OTTHUMG00000176776.1 9197 562 3 ENSG00000260459.2 FTLP14 chr16 68822587 68823070 + processed_pseudogene KNOWN OTTHUMG00000176777.2 484 484 1 ENSG00000103047.6 TANGO6 chr16 68843604 69085180 + protein_coding KNOWN OTTHUMG00000176743.3 241577 6839 49 ENSG00000199979.1 Y_RNA chr16 68885576 68885677 - misc_RNA NOVEL NA 102 102 1 ENSG00000275504.1 U7 chr16 68926894 68926957 - snRNA NOVEL NA 64 64 1 ENSG00000260999.1 RP11-521L9.1 chr16 68927547 68948261 - lincRNA NOVEL OTTHUMG00000176788.1 20715 260 2 ENSG00000266801.1 RP11-521L9.2 chr16 68933820 68937725 + sense_intronic NOVEL OTTHUMG00000178337.1 3906 641 2 ENSG00000202497.1 RNU6-898P chr16 69007052 69007155 - snRNA KNOWN NA 104 104 1 ENSG00000271129.1 RP11-123C5.5 chr16 69025860 69026643 - processed_pseudogene KNOWN OTTHUMG00000184816.1 784 479 2 ENSG00000244378.1 RPS2P45 chr16 69033675 69036042 + transcribed_processed_pseudogene KNOWN OTTHUMG00000158195.4 2368 2368 2 ENSG00000224260.5 RP1-272L16.1 chr1 209528455 209567673 - lincRNA NOVEL OTTHUMG00000036359.2 39219 1069 13 ENSG00000103044.9 HAS3 chr16 69105564 69118719 + protein_coding KNOWN OTTHUMG00000137562.2 13156 5289 18 ENSG00000168802.11 CHTF8 chr16 69118010 69132584 - protein_coding KNOWN OTTHUMG00000163909.8 14575 3383 33 ENSG00000141076.16 CIRH1A chr16 69131291 69231130 + protein_coding KNOWN OTTHUMG00000137570.5 99840 5681 118 ENSG00000207083.1 RNU6-22P chr16 69175671 69175777 - snRNA KNOWN NA 107 107 1 ENSG00000168807.15 SNTB2 chr16 69187129 69309052 + protein_coding KNOWN OTTHUMG00000137567.5 121924 9875 28 ENSG00000200164.1 Y_RNA chr16 69191123 69191223 + misc_RNA NOVEL NA 101 101 1 ENSG00000265113.1 RP11-70O5.2 chr16 69240549 69241929 + sense_intronic NOVEL OTTHUMG00000178338.1 1381 428 2 ENSG00000260914.3 RP11-343C2.11 chr16 69299682 69322700 + protein_coding PUTATIVE OTTHUMG00000186022.2 23019 1284 10 ENSG00000132612.15 VPS4A chr16 69311356 69326939 + protein_coding KNOWN OTTHUMG00000175589.5 15584 5670 18 ENSG00000213380.12 COG8 chr16 69320140 69339667 - protein_coding KNOWN OTTHUMG00000154277.5 19528 7450 20 ENSG00000008118.8 CAMK1G chr1 209583717 209613938 + protein_coding KNOWN OTTHUMG00000036361.1 30222 2676 39 ENSG00000258429.1 PDF chr16 69328621 69330595 - protein_coding KNOWN OTTHUMG00000171336.1 1975 1158 2 ENSG00000272617.1 RP11-343C2.12 chr16 69328644 69334871 - protein_coding PUTATIVE OTTHUMG00000186023.1 6228 887 2 ENSG00000260371.1 RP11-343C2.9 chr16 69335091 69356306 - protein_coding PUTATIVE OTTHUMG00000176072.1 21216 564 3 ENSG00000259900.4 RP11-343C2.7 chr16 69335276 69351730 - protein_coding NOVEL OTTHUMG00000175592.2 16455 747 9 ENSG00000132603.12 NIP7 chr16 69339430 69343111 + protein_coding KNOWN OTTHUMG00000137568.5 3682 3274 26 ENSG00000157315.4 TMED6 chr16 69343248 69351809 - protein_coding KNOWN OTTHUMG00000137571.2 8562 1411 6 ENSG00000132604.9 TERF2 chr16 69355561 69408571 - protein_coding KNOWN OTTHUMG00000137566.7 53011 5621 58 ENSG00000103018.15 CYB5B chr16 69424525 69466266 + protein_coding KNOWN OTTHUMG00000133020.5 41742 6903 28 ENSG00000261527.1 RP11-343C2.10 chr16 69443240 69444290 - processed_pseudogene KNOWN OTTHUMG00000176073.1 1051 722 2 ENSG00000260108.1 RP11-140H17.1 chr16 69463844 69466264 + 3prime_overlapping_ncrna NOVEL OTTHUMG00000176778.1 2421 2421 1 ENSG00000196878.11 LAMB3 chr1 209614870 209652466 - protein_coding KNOWN OTTHUMG00000036360.3 37597 4688 78 ENSG00000102908.19 NFAT5 chr16 69565094 69704666 + protein_coding KNOWN OTTHUMG00000137572.4 139573 16401 133 ENSG00000223109.1 MIR1538 chr16 69565808 69565868 - miRNA KNOWN NA 61 61 1 ENSG00000274093.1 RP11-140H17.2 chr16 69632141 69632571 + sense_intronic NOVEL OTTHUMG00000186978.1 431 431 1 ENSG00000260772.1 RP11-311C24.1 chr16 69703065 69704652 + 3prime_overlapping_ncrna NOVEL OTTHUMG00000176834.1 1588 1588 1 ENSG00000181019.11 NQO1 chr16 69706996 69726951 - protein_coding KNOWN OTTHUMG00000137575.2 19956 3254 35 ENSG00000261602.1 CTD-2033A16.1 chr16 69709874 69710583 + antisense NOVEL OTTHUMG00000176835.1 710 575 2 ENSG00000262136.1 CTD-2033A16.3 chr16 69727013 69742563 + antisense NOVEL OTTHUMG00000177608.1 15551 592 2 ENSG00000141101.11 NOB1 chr16 69741867 69754940 - protein_coding KNOWN OTTHUMG00000137576.3 13074 2119 34 ENSG00000260290.2 CTD-2033A16.2 chr16 69756536 69757937 - processed_pseudogene KNOWN OTTHUMG00000176836.2 1402 1402 1 ENSG00000198373.11 WWP2 chr16 69762306 69941741 + protein_coding KNOWN OTTHUMG00000137573.2 179436 9015 180 ENSG00000279169.1 CH17-228N4.2 chr1 13196823 13199589 - unprocessed_pseudogene KNOWN OTTHUMG00000189240.1 2767 1035 3 ENSG00000264831.1 MIR4260 chr1 209623444 209623510 - miRNA KNOWN NA 67 67 1 ENSG00000252443.1 SNORA62 chr16 69785994 69786113 - snoRNA NOVEL NA 120 120 1 ENSG00000208017.2 MIR140 chr16 69933073 69933182 + miRNA KNOWN NA 110 110 1 ENSG00000157322.15 CLEC18A chr16 69950705 69964452 + protein_coding KNOWN OTTHUMG00000137574.3 13748 6140 116 ENSG00000277003.1 RP11-419C5.3 chr16 69975238 69975344 + unprocessed_pseudogene KNOWN OTTHUMG00000187979.1 107 107 1 ENSG00000196696.11 PDXDC2P chr16 69976297 70065948 - processed_transcript NOVEL OTTHUMG00000167593.2 89652 6114 81 ENSG00000226232.7 RP11-419C5.2 chr16 69976388 69996188 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000167594.3 19801 1728 17 ENSG00000255185.4 PDXDC2P chr16 70010751 70065945 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000167595.1 55195 2707 38 ENSG00000239118.1 MIR1972-2 chr16 70030346 70030422 + miRNA KNOWN NA 77 77 1 ENSG00000279533.1 AC009022.1 chr16 70052395 70052769 - protein_coding KNOWN NA 375 375 1 ENSG00000241183.1 RP11-106J23.1 chr16 70079129 70079624 - processed_pseudogene KNOWN OTTHUMG00000158241.1 496 496 1 ENSG00000227591.4 RP1-28O10.1 chr1 209661364 209724125 - antisense NOVEL OTTHUMG00000036478.1 62762 477 6 ENSG00000090857.12 PDPR chr16 70113626 70162537 + protein_coding KNOWN OTTHUMG00000176963.3 48912 10385 120 ENSG00000247228.2 RP11-296I10.3 chr16 70156340 70173448 - antisense NOVEL OTTHUMG00000176981.2 17109 2492 8 ENSG00000157335.18 CLEC18C chr16 70173322 70187361 + protein_coding KNOWN OTTHUMG00000176982.3 14040 4894 134 ENSG00000261145.1 RP11-296I10.5 chr16 70202354 70202459 + processed_pseudogene KNOWN OTTHUMG00000177040.1 106 106 1 ENSG00000280006.1 AC009060.2 chr16 70205400 70205780 - protein_coding KNOWN NA 381 381 1 ENSG00000276989.1 AC009060.1 chr16 70216895 70217003 - miRNA NOVEL NA 109 109 1 ENSG00000261556.7 SMG1P7 chr16 70219574 70245616 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000177041.4 26043 4360 36 ENSG00000280252.1 FKSG63 chr16 70224358 70224738 + protein_coding KNOWN NA 381 381 1 ENSG00000223496.2 EXOSC6 chr16 70246778 70251930 - protein_coding KNOWN OTTHUMG00000137578.1 5153 5153 1 ENSG00000090861.14 AARS chr16 70252295 70289543 - protein_coding KNOWN OTTHUMG00000177042.6 37249 4498 46 ENSG00000123689.5 G0S2 chr1 209675420 209676388 + protein_coding KNOWN OTTHUMG00000036479.1 969 866 2 ENSG00000265648.2 RN7SL279P chr16 70276069 70276352 + misc_RNA KNOWN NA 284 284 1 ENSG00000157349.14 DDX19B chr16 70289663 70335283 + protein_coding KNOWN OTTHUMG00000137577.6 45621 4522 136 ENSG00000260537.1 RP11-529K1.3 chr16 70299194 70366260 + protein_coding NOVEL OTTHUMG00000177063.2 67067 887 13 ENSG00000168872.14 DDX19A chr16 70299224 70373383 + protein_coding KNOWN OTTHUMG00000137579.5 74160 8249 116 ENSG00000261777.4 RP11-529K1.2 chr16 70315640 70346747 - processed_transcript NOVEL OTTHUMG00000177044.1 31108 1508 8 ENSG00000157350.11 ST3GAL2 chr16 70375978 70439237 - protein_coding KNOWN OTTHUMG00000137580.5 63260 9744 25 ENSG00000260111.1 RP11-529K1.4 chr16 70379457 70399502 + antisense NOVEL OTTHUMG00000177066.1 20046 590 2 ENSG00000240043.1 RPS27P26 chr16 70444674 70444912 - processed_pseudogene KNOWN OTTHUMG00000158243.1 239 239 1 ENSG00000200153.1 RNU6-23P chr16 70445293 70445399 - snRNA KNOWN NA 107 107 1 ENSG00000157353.15 FUK chr16 70454421 70480274 + protein_coding KNOWN OTTHUMG00000074085.4 25854 7405 136 ENSG00000117594.8 HSD11B1 chr1 209686178 209734950 + protein_coding KNOWN OTTHUMG00000036481.4 48773 1513 26 ENSG00000103051.17 COG4 chr16 70480568 70523565 - protein_coding KNOWN OTTHUMG00000128515.9 42998 4786 140 ENSG00000189091.11 SF3B3 chr16 70523788 70577670 + protein_coding KNOWN OTTHUMG00000137582.7 53883 12419 75 ENSG00000221514.1 SNORD111B chr16 70529509 70529588 + snoRNA KNOWN NA 80 80 1 ENSG00000221066.1 SNORD111 chr16 70538005 70538098 + snoRNA KNOWN NA 94 94 1 ENSG00000157368.9 IL34 chr16 70579895 70660682 + protein_coding KNOWN OTTHUMG00000137581.4 80788 2233 27 ENSG00000132613.13 MTSS1L chr16 70661204 70686066 - protein_coding KNOWN OTTHUMG00000177023.3 24863 4999 40 ENSG00000279569.1 RP11-394B2.1 chr16 70661667 70665836 + TEC KNOWN OTTHUMG00000177024.1 4170 4170 1 ENSG00000103043.13 VAC14 chr16 70687439 70801161 - protein_coding KNOWN OTTHUMG00000137583.7 113723 8276 88 ENSG00000279412.1 RP11-394B2.5 chr16 70713987 70716890 + TEC KNOWN OTTHUMG00000177025.1 2904 2904 1 ENSG00000260156.1 RP11-394B2.6 chr16 70747057 70747926 + antisense NOVEL OTTHUMG00000177026.1 870 551 2 ENSG00000236136.1 ADORA2BP1 chr1 209744373 209745214 + processed_pseudogene KNOWN OTTHUMG00000036482.1 842 842 1 ENSG00000214353.6 VAC14-AS1 chr16 70755098 70773251 + antisense NOVEL OTTHUMG00000177027.2 18154 4853 11 ENSG00000279815.1 RP11-394B2.7 chr16 70768356 70768785 + TEC KNOWN OTTHUMG00000184090.1 430 430 1 ENSG00000279122.1 RP11-394B2.3 chr16 70768967 70770221 - TEC KNOWN OTTHUMG00000177028.1 1255 1255 1 ENSG00000279123.1 RP11-424M24.3 chr16 70778433 70779145 + TEC KNOWN OTTHUMG00000178083.1 713 713 1 ENSG00000262890.1 RP11-424M24.5 chr16 70802083 70802840 - lincRNA NOVEL OTTHUMG00000178084.2 758 758 1 ENSG00000157423.16 HYDIN chr16 70807378 71230722 - protein_coding KNOWN OTTHUMG00000137584.11 423345 23408 304 ENSG00000221725.1 RNU6ATAC25P chr16 70852698 70852814 + snRNA KNOWN NA 117 117 1 ENSG00000223316.1 AC027281.1 chr16 70873184 70873313 - miRNA NOVEL NA 130 130 1 ENSG00000259833.4 RP11-23E19.1 chr16 71080866 71093667 + antisense NOVEL OTTHUMG00000177000.1 12802 666 7 ENSG00000259798.1 RP11-23E19.2 chr16 71113352 71114000 + antisense NOVEL OTTHUMG00000177001.1 649 483 2 ENSG00000009790.13 TRAF3IP3 chr1 209756032 209782320 + protein_coding KNOWN OTTHUMG00000036480.6 26289 7750 126 ENSG00000180917.15 CMTR2 chr16 71281389 71289715 - protein_coding KNOWN OTTHUMG00000137587.2 8327 7582 23 ENSG00000261260.1 CTD-2520I13.1 chr16 71301583 71302869 + lincRNA NOVEL OTTHUMG00000176794.1 1287 434 2 ENSG00000221237.1 AC106736.1 chr16 71331189 71331299 + miRNA NOVEL NA 111 111 1 ENSG00000172137.17 CALB2 chr16 71358713 71390438 + protein_coding KNOWN OTTHUMG00000137589.5 31726 1703 40 ENSG00000261348.1 RP11-510M2.1 chr16 71410440 71426464 - lincRNA NOVEL OTTHUMG00000176795.1 16025 530 3 ENSG00000262120.1 RP11-510M2.7 chr16 71420483 71421518 + unprocessed_pseudogene KNOWN OTTHUMG00000177576.1 1036 333 2 ENSG00000260734.3 RP11-510M2.4 chr16 71430262 71432282 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000176796.3 2021 894 10 ENSG00000262008.1 RP11-510M2.8 chr16 71443055 71443856 - unprocessed_pseudogene KNOWN OTTHUMG00000177577.1 802 193 2 ENSG00000167377.16 ZNF23 chr16 71447597 71463095 - protein_coding KNOWN OTTHUMG00000176797.35 15499 7287 45 ENSG00000261611.5 AC010547.9 chr16 71447600 71489311 - protein_coding NOVEL OTTHUMG00000137588.36 41712 3677 12 ENSG00000162757.4 C1orf74 chr1 209779208 209784559 - protein_coding KNOWN OTTHUMG00000036483.2 5352 4684 2 ENSG00000247324.2 RP11-510M2.2 chr16 71462278 71465941 + antisense NOVEL OTTHUMG00000176798.1 3664 2793 5 ENSG00000157429.14 ZNF19 chr16 71464555 71565089 - protein_coding KNOWN OTTHUMG00000137593.7 100535 9225 68 ENSG00000260520.1 RP11-510M2.6 chr16 71513863 71517849 + antisense NOVEL OTTHUMG00000176864.1 3987 440 3 ENSG00000140835.9 CHST4 chr16 71525233 71538746 + protein_coding KNOWN OTTHUMG00000137592.4 13514 2669 6 ENSG00000260015.1 RP11-510M2.5 chr16 71539834 71541825 - sense_intronic NOVEL OTTHUMG00000176865.1 1992 409 2 ENSG00000252339.1 RNU6-1061P chr16 71563430 71563528 - snRNA KNOWN NA 99 99 1 ENSG00000198650.9 TAT chr16 71565660 71577130 - protein_coding KNOWN OTTHUMG00000137590.3 11471 5407 19 ENSG00000260886.1 TAT-AS1 chr16 71565789 71578187 + antisense NOVEL OTTHUMG00000176800.1 12399 873 4 ENSG00000260593.1 RP11-432I5.2 chr16 71623708 71626816 - antisense NOVEL OTTHUMG00000176866.1 3109 465 2 ENSG00000140832.8 MARVELD3 chr16 71626161 71642114 + protein_coding KNOWN OTTHUMG00000137591.3 15954 6446 16 ENSG00000117595.9 IRF6 chr1 209785623 209806175 - protein_coding KNOWN OTTHUMG00000036521.1 20553 4915 24 ENSG00000040199.17 PHLPP2 chr16 71637835 71724701 - protein_coding KNOWN OTTHUMG00000176867.2 86867 12493 91 ENSG00000260185.1 RP11-432I5.6 chr16 71655027 71664212 + antisense NOVEL OTTHUMG00000176868.1 9186 406 2 ENSG00000199301.1 RNU6-208P chr16 71666091 71666197 + snRNA KNOWN NA 107 107 1 ENSG00000263666.1 SNORA70D chr16 71698567 71698701 - snoRNA KNOWN NA 135 135 1 ENSG00000261513.1 RP11-432I5.8 chr16 71723180 71724230 + antisense NOVEL OTTHUMG00000176869.1 1051 777 2 ENSG00000260612.1 RP11-432I5.4 chr16 71726975 71727992 + lincRNA NOVEL OTTHUMG00000176870.1 1018 1018 1 ENSG00000166747.11 AP1G1 chr16 71729000 71809201 - protein_coding KNOWN OTTHUMG00000176871.3 80202 10980 199 ENSG00000223224.1 SNORD71 chr16 71758402 71758487 - snoRNA KNOWN NA 86 86 1 ENSG00000262140.1 RP11-417N10.3 chr16 71833787 71835932 + unprocessed_pseudogene KNOWN OTTHUMG00000178090.1 2146 881 3 ENSG00000224470.6 ATXN1L chr16 71845991 71885268 + protein_coding KNOWN OTTHUMG00000176872.3 39278 8542 9 ENSG00000117597.16 DIEXF chr1 209828007 209857565 + protein_coding KNOWN OTTHUMG00000036654.3 29559 10376 15 ENSG00000182149.19 IST1 chr16 71845996 71931199 + protein_coding KNOWN OTTHUMG00000137597.7 85204 7806 167 ENSG00000279592.1 RP11-417N10.4 chr16 71859680 71860676 + TEC KNOWN OTTHUMG00000178091.1 997 997 1 ENSG00000102984.13 ZNF821 chr16 71859680 71895336 - protein_coding KNOWN OTTHUMG00000176874.2 35657 3402 135 ENSG00000261765.1 RP11-498D10.3 chr16 71881553 71882273 - sense_intronic NOVEL OTTHUMG00000176875.1 721 426 2 ENSG00000277481.1 PKD1L3 chr16 71929538 71999978 - protein_coding KNOWN OTTHUMG00000166114.4 70441 5199 30 ENSG00000264079.2 AC009127.1 chr16 71978441 71978541 + miRNA NOVEL NA 101 101 1 ENSG00000242176.1 RPL39P31 chr16 71991151 71991305 - processed_pseudogene KNOWN OTTHUMG00000158246.1 155 155 1 ENSG00000263311.1 RP11-498D10.8 chr16 72004239 72004803 - unprocessed_pseudogene KNOWN OTTHUMG00000178101.1 565 403 2 ENSG00000263232.2 ATP5A1P3 chr16 72005037 72006543 - processed_pseudogene KNOWN OTTHUMG00000178102.2 1507 1507 1 ENSG00000102967.10 DHODH chr16 72008588 72027664 + protein_coding KNOWN OTTHUMG00000178093.5 19077 6921 49 ENSG00000143469.15 SYT14 chr1 209938174 210171315 + protein_coding KNOWN OTTHUMG00000036652.5 233142 12436 59 ENSG00000140830.7 TXNL4B chr16 72044289 72094431 - protein_coding KNOWN OTTHUMG00000173453.1 50143 3170 24 ENSG00000257017.7 HP chr16 72054592 72061055 + protein_coding KNOWN OTTHUMG00000173009.5 6464 5405 87 ENSG00000261701.5 HPR chr16 72063224 72077246 + protein_coding KNOWN OTTHUMG00000173010.2 14023 1610 18 ENSG00000260252.1 RP11-384M15.3 chr16 72084857 72087443 + antisense NOVEL OTTHUMG00000173454.1 2587 369 2 ENSG00000140829.10 DHX38 chr16 72093562 72112912 + protein_coding KNOWN OTTHUMG00000137596.5 19351 6361 88 ENSG00000118557.14 PMFBP1 chr16 72112157 72176878 - protein_coding KNOWN OTTHUMG00000167827.3 64722 5691 124 ENSG00000261673.1 RP11-328J14.1 chr16 72224565 72225144 - lincRNA NOVEL OTTHUMG00000173455.1 580 391 2 ENSG00000261774.1 RP11-328J14.2 chr16 72278268 72278568 + processed_pseudogene KNOWN OTTHUMG00000173456.1 301 301 1 ENSG00000261008.5 LINC01572 chr16 72283301 72665009 - lincRNA NOVEL OTTHUMG00000173457.3 381709 4752 41 ENSG00000260664.2 AC004158.3 chr16 72425948 72533892 + lincRNA NOVEL OTTHUMG00000173458.2 107945 5253 3 ENSG00000279804.1 PRAMEF18 chr1 13222695 13226133 - protein_coding KNOWN NA 3439 2104 3 ENSG00000203706.7 SERTAD4-AS1 chr1 210231456 210234047 - antisense KNOWN OTTHUMG00000036392.2 2592 1004 6 ENSG00000280264.1 AC004158.1 chr16 72496967 72497341 - protein_coding KNOWN NA 375 375 1 ENSG00000221286.1 AC092289.1 chr16 72579542 72579637 - miRNA NOVEL NA 96 96 1 ENSG00000273581.1 AC092289.2 chr16 72607780 72607888 + miRNA NOVEL NA 109 109 1 ENSG00000259768.5 RP5-991G20.1 chr16 72665170 72791624 + antisense NOVEL OTTHUMG00000172559.5 126455 4842 5 ENSG00000238731.1 RNU7-90P chr16 72673503 72673564 + snRNA KNOWN NA 62 62 1 ENSG00000261764.1 KRT18P18 chr16 72728616 72729894 + transcribed_processed_pseudogene KNOWN OTTHUMG00000173050.1 1279 1279 1 ENSG00000279206.1 RP5-991G20.6 chr16 72772673 72773272 + lincRNA NOVEL OTTHUMG00000173051.2 600 600 1 ENSG00000140836.13 ZFHX3 chr16 72782885 73059698 - protein_coding KNOWN OTTHUMG00000137599.3 276814 17503 23 ENSG00000265573.1 AC004943.1 chr16 72787693 72787773 - miRNA NOVEL NA 81 81 1 ENSG00000259209.3 RP5-991G20.2 chr16 72805998 72809872 + antisense NOVEL OTTHUMG00000172560.4 3875 1697 5 ENSG00000082497.10 SERTAD4 chr1 210232799 210246631 + protein_coding KNOWN OTTHUMG00000036391.1 13833 5467 15 ENSG00000251868.1 RNU7-71P chr16 72821933 72821992 - snRNA KNOWN NA 60 60 1 ENSG00000279757.1 CTD-2326C4.1 chr16 72973374 72973832 - TEC KNOWN OTTHUMG00000178105.1 459 459 1 ENSG00000221799.1 AC132068.1 chr16 72984857 72984954 + miRNA NOVEL NA 98 98 1 ENSG00000280092.1 AC002044.3 chr16 73005601 73006141 - TEC KNOWN OTTHUMG00000178106.1 541 541 1 ENSG00000272330.1 AC002044.4 chr16 73014319 73014476 - sense_intronic NOVEL OTTHUMG00000185614.1 158 158 1 ENSG00000279591.1 AC002044.1 chr16 73015047 73016016 - TEC KNOWN OTTHUMG00000178108.1 970 970 1 ENSG00000272250.1 RP11-346C20.4 chr16 73060245 73060759 + lincRNA NOVEL OTTHUMG00000185615.1 515 515 1 ENSG00000271009.2 RP11-346C20.3 chr16 73060470 73062316 + lincRNA NOVEL OTTHUMG00000185234.2 1847 1847 1 ENSG00000260880.2 HCCAT5 chr16 73092349 73093774 + lincRNA NOVEL OTTHUMG00000172964.2 1426 1079 3 ENSG00000197445.2 C16orf47 chr16 73126637 73144447 - lincRNA KNOWN OTTHUMG00000137600.1 17811 1308 4 ENSG00000228110.4 ST13P19 chr1 210265636 210267241 - processed_pseudogene KNOWN OTTHUMG00000036393.3 1606 1124 2 ENSG00000261227.2 AC140912.1 chr16 73232055 73233970 + lincRNA NOVEL OTTHUMG00000172965.2 1916 1141 3 ENSG00000279120.1 RP11-140I24.2 chr16 73293866 73294296 - TEC KNOWN OTTHUMG00000176219.2 431 431 1 ENSG00000258779.5 LINC01568 chr16 73386805 73421393 + lincRNA NOVEL OTTHUMG00000170832.2 34589 4082 9 ENSG00000258582.1 RP11-44L9.1 chr16 73483317 73487744 + lincRNA NOVEL OTTHUMG00000170833.1 4428 577 3 ENSG00000260687.1 RP11-44L9.2 chr16 73499309 73499763 + lincRNA NOVEL OTTHUMG00000177073.1 455 375 2 ENSG00000259971.1 RP11-44L9.3 chr16 73511176 73511654 + lincRNA NOVEL OTTHUMG00000177074.1 479 479 1 ENSG00000260848.1 CTD-2009A10.1 chr16 73543941 73558522 + lincRNA NOVEL OTTHUMG00000177075.1 14582 532 4 ENSG00000259817.1 RP11-53L24.1 chr16 73812621 73816054 + lincRNA NOVEL OTTHUMG00000177076.1 3434 392 4 ENSG00000225178.4 RPSAP56 chr16 73940639 73941524 - processed_pseudogene KNOWN OTTHUMG00000158247.2 886 886 1 ENSG00000279420.1 RP11-42H13.1 chr16 74053365 74053965 + TEC KNOWN OTTHUMG00000177077.1 601 601 1 ENSG00000233455.2 RP4-667H12.4 chr1 210303684 210304540 + processed_pseudogene KNOWN OTTHUMG00000036448.2 857 857 1 ENSG00000261404.4 AC009120.4 chr16 74054151 74296762 - lincRNA NOVEL OTTHUMG00000176255.2 242612 1769 9 ENSG00000279100.1 AC009120.9 chr16 74150520 74151299 + TEC KNOWN OTTHUMG00000177078.1 780 780 1 ENSG00000260471.1 AC009120.8 chr16 74220929 74221427 + processed_pseudogene KNOWN OTTHUMG00000177079.1 499 499 1 ENSG00000261248.1 AC009120.10 chr16 74282415 74287519 + lincRNA NOVEL OTTHUMG00000177080.1 5105 475 2 ENSG00000275236.1 AC009120.11 chr16 74289593 74291052 - lincRNA NOVEL OTTHUMG00000186984.1 1460 1460 1 ENSG00000103035.9 PSMD7 chr16 74296775 74306288 + protein_coding KNOWN OTTHUMG00000137601.3 9514 2740 32 ENSG00000259972.2 AC009120.6 chr16 74305127 74335346 - processed_transcript NOVEL OTTHUMG00000176993.3 30220 3297 10 ENSG00000239763.2 AC009120.3 chr16 74312609 74313390 - processed_pseudogene KNOWN OTTHUMG00000158253.2 782 473 2 ENSG00000260884.1 AC009120.5 chr16 74313337 74315634 + lincRNA NOVEL OTTHUMG00000176994.1 2298 513 2 ENSG00000214331.7 RP11-252A24.2 chr16 74332402 74368240 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000176996.2 35839 3828 48 ENSG00000054392.11 HHAT chr1 210328252 210676296 + protein_coding KNOWN OTTHUMG00000036447.3 348045 6641 83 ENSG00000261079.1 RP11-252A24.3 chr16 74367462 74369826 + lincRNA NOVEL OTTHUMG00000176997.1 2365 2365 1 ENSG00000196436.8 NPIPB15 chr16 74377878 74392080 + protein_coding KNOWN OTTHUMG00000156916.4 14203 1702 8 ENSG00000276822.1 RP11-252A24.8 chr16 74393076 74393183 - unprocessed_pseudogene KNOWN OTTHUMG00000187988.1 108 108 1 ENSG00000140839.10 CLEC18B chr16 74408270 74421953 - protein_coding KNOWN OTTHUMG00000176998.3 13684 3143 62 ENSG00000261170.1 RP11-252A24.5 chr16 74422120 74435254 + antisense NOVEL OTTHUMG00000177173.1 13135 665 5 ENSG00000090863.10 GLG1 chr16 74447427 74607144 - protein_coding KNOWN OTTHUMG00000177174.5 159718 14111 171 ENSG00000251794.1 RNU6-237P chr16 74456541 74456611 + snRNA KNOWN NA 71 71 1 ENSG00000207525.1 Y_RNA chr16 74463888 74463988 - misc_RNA NOVEL NA 101 101 1 ENSG00000240861.1 RP11-572F4.1 chr16 74552251 74552746 + processed_pseudogene KNOWN OTTHUMG00000158257.1 496 496 1 ENSG00000270945.1 HSPE1P7 chr16 74612596 74613221 - processed_pseudogene KNOWN OTTHUMG00000184815.1 626 321 2 ENSG00000200972.1 RNU5A-8P chr1 210374154 210374267 - snRNA KNOWN NA 114 114 1 ENSG00000168411.12 RFWD3 chr16 74621394 74666881 - protein_coding KNOWN OTTHUMG00000177368.4 45488 6465 58 ENSG00000262904.1 TMPOP2 chr16 74667506 74668706 + processed_pseudogene KNOWN OTTHUMG00000177355.1 1201 1201 1 ENSG00000168404.11 MLKL chr16 74671855 74700960 - protein_coding KNOWN OTTHUMG00000177356.4 29106 5692 40 ENSG00000103089.7 FA2H chr16 74712955 74774831 - protein_coding KNOWN OTTHUMG00000137603.4 61877 3279 20 ENSG00000261458.1 RP11-787D11.1 chr16 74842587 74843883 + unprocessed_pseudogene KNOWN OTTHUMG00000176940.1 1297 320 3 ENSG00000103091.13 WDR59 chr16 74871367 75000173 - protein_coding KNOWN OTTHUMG00000170831.5 128807 9422 152 ENSG00000186187.10 ZNRF1 chr16 74999030 75110994 + protein_coding KNOWN OTTHUMG00000137606.4 111965 8824 37 ENSG00000247033.1 RP11-252E2.1 chr16 75108601 75110712 - antisense NOVEL OTTHUMG00000176990.1 2112 1666 2 ENSG00000166816.12 LDHD chr16 75111860 75116771 - protein_coding KNOWN OTTHUMG00000137605.2 4912 2359 30 ENSG00000261058.1 RP11-252E2.2 chr16 75119558 75144200 + lincRNA NOVEL OTTHUMG00000176991.1 24643 510 5 ENSG00000270936.1 RP5-879K22.1 chr1 210462345 210463012 - processed_pseudogene KNOWN OTTHUMG00000184470.1 668 668 1 ENSG00000184517.10 ZFP1 chr16 75148492 75172236 + protein_coding KNOWN OTTHUMG00000137602.3 23745 3761 31 ENSG00000213318.4 RP11-331F4.1 chr16 75192465 75193247 - processed_pseudogene KNOWN OTTHUMG00000158261.1 783 783 1 ENSG00000168928.11 CTRB2 chr16 75204096 75207185 - protein_coding KNOWN OTTHUMG00000159271.2 3090 2346 27 ENSG00000168925.9 CTRB1 chr16 75219000 75224924 + protein_coding KNOWN OTTHUMG00000159272.3 5925 1016 11 ENSG00000240338.4 RP11-331F4.4 chr16 75226074 75228197 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000159270.2 2124 1441 12 ENSG00000050820.15 BCAR1 chr16 75228187 75268053 - protein_coding KNOWN OTTHUMG00000137604.6 39867 9178 96 ENSG00000280152.1 RP11-331F4.5 chr16 75245994 75250077 - TEC KNOWN OTTHUMG00000177006.1 4084 4084 1 ENSG00000252101.2 RNU6-758P chr16 75286712 75286800 - snRNA KNOWN NA 89 89 1 ENSG00000153774.7 CFDP1 chr16 75293698 75433485 - protein_coding KNOWN OTTHUMG00000137615.5 139788 3317 40 ENSG00000259999.1 RP11-252K23.1 chr16 75321890 75325048 - sense_intronic NOVEL OTTHUMG00000177030.2 3159 427 2 ENSG00000143473.10 KCNH1 chr1 210678315 211134115 - protein_coding KNOWN OTTHUMG00000036309.4 455801 8106 22 ENSG00000261783.1 RP11-252K23.2 chr16 75379818 75381260 - sense_intronic NOVEL OTTHUMG00000177128.1 1443 374 2 ENSG00000252122.1 SNORA76 chr16 75409332 75409466 - snoRNA NOVEL NA 135 135 1 ENSG00000261717.4 RP11-77K12.1 chr16 75412684 75464706 - protein_coding NOVEL OTTHUMG00000177067.2 52023 530 9 ENSG00000274220.1 RP11-77K12.9 chr16 75433836 75436392 + lincRNA NOVEL OTTHUMG00000186992.1 2557 2557 1 ENSG00000166822.11 TMEM170A chr16 75443054 75465497 - protein_coding KNOWN OTTHUMG00000137614.3 22444 5572 22 ENSG00000261476.1 RP11-77K12.3 chr16 75458252 75460017 - sense_intronic NOVEL OTTHUMG00000177068.1 1766 852 2 ENSG00000183196.7 CHST6 chr16 75472052 75495384 - protein_coding KNOWN OTTHUMG00000137612.3 23333 8469 7 ENSG00000203472.3 RP11-77K12.4 chr16 75475896 75495407 + antisense NOVEL OTTHUMG00000177129.1 19512 573 2 ENSG00000273971.1 RP11-77K12.10 chr16 75497948 75498289 - lincRNA NOVEL OTTHUMG00000186995.1 342 342 1 ENSG00000262583.1 RP11-77K12.5 chr16 75499788 75516280 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000177130.2 16493 830 8 ENSG00000279333.1 RP11-75I2.3 chr1 210678315 210681932 + TEC KNOWN OTTHUMG00000176323.1 3618 3618 1 ENSG00000260092.1 RP11-77K12.7 chr16 75528532 75545428 - protein_coding NOVEL OTTHUMG00000177131.1 16897 2125 5 ENSG00000135702.13 CHST5 chr16 75528535 75535247 - protein_coding KNOWN OTTHUMG00000137610.2 6713 3322 7 ENSG00000205084.9 TMEM231 chr16 75536744 75556286 - protein_coding KNOWN OTTHUMG00000177132.5 19543 6015 48 ENSG00000259992.1 RP11-77K12.8 chr16 75541399 75608445 - processed_transcript NOVEL OTTHUMG00000177133.1 67047 798 8 ENSG00000276408.1 RP11-490B18.5 chr16 75556392 75557059 + lincRNA NOVEL OTTHUMG00000186993.1 668 668 1 ENSG00000034713.6 GABARAPL2 chr16 75566351 75577881 + protein_coding KNOWN OTTHUMG00000137613.2 11531 3034 15 ENSG00000276523.1 RP11-490B18.6 chr16 75572185 75572685 - antisense NOVEL OTTHUMG00000186994.1 501 501 1 ENSG00000065457.9 ADAT1 chr16 75596981 75623300 - protein_coding KNOWN OTTHUMG00000137611.3 26320 4486 56 ENSG00000065427.13 KARS chr16 75627474 75648643 - protein_coding KNOWN OTTHUMG00000137609.4 21170 4065 85 ENSG00000166848.5 TERF2IP chr16 75647786 75761872 + protein_coding KNOWN OTTHUMG00000177136.3 114087 3379 9 ENSG00000224668.1 IPO8P1 chr1 210859177 210862285 - processed_pseudogene KNOWN OTTHUMG00000036450.1 3109 3109 1 ENSG00000240199.3 RN7SL520P chr16 75698531 75698816 - misc_RNA KNOWN NA 286 286 1 ENSG00000261424.1 ATP5F1P7 chr16 75709056 75709815 - processed_pseudogene KNOWN OTTHUMG00000177137.1 760 760 1 ENSG00000261313.1 RP11-2C15.1 chr16 75838630 75860867 - lincRNA NOVEL OTTHUMG00000177158.1 22238 677 11 ENSG00000199299.1 RNA5SP430 chr16 75861048 75861157 - rRNA KNOWN NA 110 110 1 ENSG00000260223.1 RP11-293N14.1 chr16 76107283 76147806 - lincRNA NOVEL OTTHUMG00000177159.1 40524 861 6 ENSG00000260983.1 RP11-150D5.2 chr16 76228385 76262365 - lincRNA NOVEL OTTHUMG00000177032.1 33981 739 3 ENSG00000244485.1 RPL18P13 chr16 76235055 76235623 - processed_pseudogene KNOWN OTTHUMG00000158262.1 569 569 1 ENSG00000152910.17 CNTNAP4 chr16 76277278 76559238 + protein_coding KNOWN OTTHUMG00000137617.6 281961 6482 160 ENSG00000252814.1 RN7SKP233 chr16 76287630 76287739 + misc_RNA KNOWN NA 110 110 1 ENSG00000264645.1 AC010528.1 chr16 76380026 76380159 + miRNA NOVEL NA 134 134 1 ENSG00000240409.1 MTATP8P1 chr1 633535 633741 + unprocessed_pseudogene KNOWN OTTHUMG00000002473.1 207 207 1 ENSG00000250894.1 RP11-450I1.4 chr1 13245863 13248652 + unprocessed_pseudogene KNOWN OTTHUMG00000001985.2 2790 1371 3 ENSG00000234233.1 KCNH1-IT1 chr1 211132588 211133374 - sense_intronic NOVEL OTTHUMG00000046162.1 787 626 2 ENSG00000252022.1 SNORD33 chr16 76469508 76469595 - snoRNA NOVEL NA 88 88 1 ENSG00000261833.2 RP11-58C22.1 chr16 76553417 76819624 + protein_coding NOVEL OTTHUMG00000173061.2 266208 323 4 ENSG00000273659.1 RP11-58C22.2 chr16 76582556 76583098 + lincRNA NOVEL OTTHUMG00000186998.1 543 543 1 ENSG00000250514.1 RP11-96P7.1 chr16 76634998 76658478 + lincRNA NOVEL OTTHUMG00000173062.1 23481 2198 4 ENSG00000259995.1 CTD-2336H13.2 chr16 76736342 76928169 + lincRNA NOVEL OTTHUMG00000176662.2 191828 466 3 ENSG00000266426.1 MIR4719 chr16 76868936 76869019 + miRNA KNOWN NA 84 84 1 ENSG00000260797.1 CTD-2336H13.1 chr16 76878274 76878936 - processed_pseudogene KNOWN OTTHUMG00000176661.1 663 663 1 ENSG00000279856.1 CTD-2300H10.2 chr16 77104260 77105297 + TEC KNOWN OTTHUMG00000176663.1 1038 1038 1 ENSG00000103111.13 MON1B chr16 77190835 77202405 + protein_coding KNOWN OTTHUMG00000137618.2 11571 6942 38 ENSG00000205078.5 SYCE1L chr16 77199397 77213215 + protein_coding KNOWN OTTHUMG00000176809.1 13819 1244 15 ENSG00000234004.4 RP11-543B16.1 chr1 211173488 211173849 + processed_pseudogene KNOWN OTTHUMG00000036449.2 362 362 1 ENSG00000261063.1 RP11-538I12.2 chr16 77201474 77249957 - antisense NOVEL OTTHUMG00000176810.1 48484 566 2 ENSG00000226348.1 VN2R10P chr16 77220406 77221258 + unitary_pseudogene KNOWN OTTHUMG00000154504.1 853 853 1 ENSG00000260922.1 RP11-538I12.3 chr16 77234877 77290934 + antisense NOVEL OTTHUMG00000176819.1 56058 652 3 ENSG00000140873.14 ADAMTS18 chr16 77247813 77435114 - protein_coding KNOWN OTTHUMG00000137619.2 187302 6678 50 ENSG00000260701.1 RP11-449J10.1 chr16 77433382 77444336 + antisense NOVEL OTTHUMG00000176820.1 10955 579 2 ENSG00000216131.2 AC025284.1 chr16 77436012 77436100 - miRNA NOVEL NA 89 89 1 ENSG00000261154.1 RP11-571O6.1 chr16 77590806 77610681 + lincRNA NOVEL OTTHUMG00000176842.1 19876 419 3 ENSG00000278862.1 RP11-571O6.2 chr16 77657174 77660570 + TEC KNOWN OTTHUMG00000176843.1 3397 3397 1 ENSG00000140876.10 NUDT7 chr16 77722492 77742260 + protein_coding KNOWN OTTHUMG00000176808.1 19769 1638 23 ENSG00000261707.1 RP11-264M12.2 chr16 77741468 77743000 - antisense NOVEL OTTHUMG00000176844.1 1533 800 2 ENSG00000223562.1 RP11-543B16.3 chr1 211182156 211183104 - lincRNA NOVEL OTTHUMG00000041139.1 949 116 2 ENSG00000171724.2 VAT1L chr16 77788530 77980107 + protein_coding KNOWN OTTHUMG00000176845.1 191578 4137 13 ENSG00000278926.1 RP11-264M12.4 chr16 77800023 77801714 + TEC KNOWN OTTHUMG00000176846.1 1692 1692 1 ENSG00000261330.1 RP11-281J9.1 chr16 77892422 77892915 + processed_pseudogene KNOWN OTTHUMG00000176847.1 494 494 1 ENSG00000261540.1 RP11-281J9.2 chr16 78014683 78059454 - antisense NOVEL OTTHUMG00000176848.1 44772 488 2 ENSG00000166509.9 CLEC3A chr16 78022515 78066761 + protein_coding KNOWN OTTHUMG00000137620.3 44247 3007 8 ENSG00000260731.1 KRT8P22 chr16 78048483 78049897 - processed_pseudogene KNOWN OTTHUMG00000176849.1 1415 1415 1 ENSG00000261776.1 RP11-358L22.2 chr16 78055824 78056927 - processed_pseudogene KNOWN OTTHUMG00000176850.1 1104 1104 1 ENSG00000186153.15 WWOX chr16 78099413 79212667 + protein_coding KNOWN OTTHUMG00000176851.2 1113255 4886 99 ENSG00000276007.1 RP11-358L22.3 chr16 78123243 78124332 + sense_intronic NOVEL OTTHUMG00000187001.1 1090 1090 1 ENSG00000279991.1 RP11-190D6.1 chr16 78166717 78168514 - TEC KNOWN OTTHUMG00000176921.1 1798 1798 1 ENSG00000226986.4 RP11-543B16.2 chr1 211207239 211207897 + processed_pseudogene KNOWN OTTHUMG00000036451.2 659 659 1 ENSG00000260969.1 RP11-190D6.2 chr16 78237362 78241218 - antisense NOVEL OTTHUMG00000176958.1 3857 443 3 ENSG00000260014.1 LSM3P5 chr16 78355529 78355834 + processed_pseudogene KNOWN OTTHUMG00000176922.1 306 306 1 ENSG00000260733.1 RP11-264L1.4 chr16 78495926 78506568 - antisense NOVEL OTTHUMG00000176959.1 10643 719 3 ENSG00000279887.1 RP11-264L1.1 chr16 78525189 78526535 - TEC KNOWN OTTHUMG00000176923.1 1347 1347 1 ENSG00000261837.1 RP11-264L1.3 chr16 78534374 78535648 + sense_intronic NOVEL OTTHUMG00000176924.1 1275 707 2 ENSG00000279129.1 RP11-264L1.2 chr16 78550739 78553296 - TEC KNOWN OTTHUMG00000176925.1 2558 2558 2 ENSG00000243101.1 RPS3P7 chr16 78825281 78826006 + processed_pseudogene KNOWN OTTHUMG00000158264.1 726 726 1 ENSG00000280115.1 RP11-133M8.3 chr16 78872739 78873505 + TEC KNOWN OTTHUMG00000176928.1 767 767 1 ENSG00000280190.1 RP11-319G9.1 chr16 78890231 78892302 + TEC KNOWN OTTHUMG00000176929.1 2072 2072 1 ENSG00000260816.2 RP11-319G9.3 chr16 78895361 78899644 + sense_intronic NOVEL OTTHUMG00000176931.2 4284 4284 1 ENSG00000221488.1 AC092017.1 chr1 211210989 211211082 - miRNA NOVEL NA 94 94 1 ENSG00000279732.1 RP11-319G9.4 chr16 78981722 78981843 - TEC KNOWN OTTHUMG00000176932.1 122 122 1 ENSG00000261537.1 RP11-319G9.5 chr16 78994345 79004730 + sense_intronic NOVEL OTTHUMG00000176933.1 10386 793 3 ENSG00000280274.1 RP11-556H2.1 chr16 79016136 79017429 + TEC KNOWN OTTHUMG00000176934.1 1294 1294 1 ENSG00000260694.1 RP11-556H2.4 chr16 79077376 79078234 - antisense NOVEL OTTHUMG00000176960.1 859 476 2 ENSG00000260479.1 RP11-556H2.3 chr16 79090050 79101754 + sense_intronic NOVEL OTTHUMG00000176935.1 11705 433 3 ENSG00000260511.1 RP11-556H2.2 chr16 79105957 79110882 + sense_intronic NOVEL OTTHUMG00000176936.1 4926 377 3 ENSG00000277954.1 RP11-679B19.1 chr16 79202624 79206739 - antisense NOVEL OTTHUMG00000176937.2 4116 4116 1 ENSG00000261722.1 RP11-679B19.2 chr16 79212711 79229453 - lincRNA NOVEL OTTHUMG00000176961.1 16743 335 2 ENSG00000222244.1 RNA5SP431 chr16 79264454 79264573 + rRNA KNOWN NA 120 120 1 ENSG00000261472.1 RP11-467I17.1 chr16 79505603 79516293 + lincRNA NOVEL OTTHUMG00000176973.1 10691 419 2 ENSG00000117625.12 RCOR3 chr1 211258377 211316385 + protein_coding KNOWN OTTHUMG00000036996.3 58009 9092 106 ENSG00000178573.6 MAF chr16 79585843 79600714 - protein_coding KNOWN OTTHUMG00000137621.3 14872 6976 5 ENSG00000277214.1 RP11-70D24.3 chr16 79603572 79604177 + lincRNA NOVEL OTTHUMG00000187009.1 606 606 1 ENSG00000278058.1 RP11-70D24.2 chr16 79605802 79606605 + lincRNA NOVEL OTTHUMG00000187007.1 804 804 1 ENSG00000275040.1 RP11-70D24.4 chr16 79619469 79620110 + lincRNA NOVEL OTTHUMG00000187010.1 642 642 1 ENSG00000221330.1 AC009159.1 chr16 79669655 79669737 - miRNA NOVEL NA 83 83 1 ENSG00000279378.1 RP11-70D24.1 chr16 79675685 79677715 - TEC KNOWN OTTHUMG00000176974.1 2031 2031 1 ENSG00000260876.4 LINC01229 chr16 79676108 79807922 + lincRNA NOVEL OTTHUMG00000176975.1 131815 2409 18 ENSG00000261390.4 RP11-345M22.2 chr16 79715232 79770563 - lincRNA NOVEL OTTHUMG00000176976.2 55332 3218 17 ENSG00000261082.1 LINC01228 chr16 79798050 79827150 - lincRNA NOVEL OTTHUMG00000176977.1 29101 623 2 ENSG00000260237.1 RP11-148M9.1 chr16 80040662 80045745 + lincRNA NOVEL OTTHUMG00000176978.1 5084 531 2 ENSG00000082512.13 TRAF5 chr1 211326615 211374946 + protein_coding KNOWN OTTHUMG00000036997.1 48332 9022 51 ENSG00000260706.4 RP11-525K10.1 chr16 80065836 80167577 + lincRNA NOVEL OTTHUMG00000176979.1 101742 755 7 ENSG00000259867.4 RP11-525K10.3 chr16 80155053 80563135 - antisense NOVEL OTTHUMG00000177002.1 408083 2990 24 ENSG00000261376.1 RP11-525K10.2 chr16 80179129 80180682 + lincRNA NOVEL OTTHUMG00000176980.1 1554 536 2 ENSG00000168589.13 DYNLRB2 chr16 80540734 80550760 + protein_coding KNOWN OTTHUMG00000137622.2 10027 1464 23 ENSG00000260183.1 RP11-109P11.1 chr16 80547842 80552514 - antisense NOVEL OTTHUMG00000177003.1 4673 534 2 ENSG00000260737.4 LINC01227 chr16 80566794 80572808 - lincRNA NOVEL OTTHUMG00000176267.2 6015 2141 15 ENSG00000166446.13 CDYL2 chr16 80597906 80804329 - protein_coding KNOWN OTTHUMG00000177004.3 206424 8557 39 ENSG00000260064.1 RP11-18F14.4 chr16 80627551 80628379 - sense_intronic NOVEL OTTHUMG00000177005.1 829 829 1 ENSG00000265341.1 AC092332.1 chr16 80665461 80665563 - miRNA NOVEL NA 103 103 1 ENSG00000260594.1 CTD-2055G21.1 chr16 80736360 80742305 + antisense NOVEL OTTHUMG00000177011.1 5946 452 3 ENSG00000153363.11 LINC00467 chr1 211382803 211435333 + lincRNA KNOWN OTTHUMG00000036998.4 52531 4448 18 ENSG00000260896.4 RP11-314O13.1 chr16 80828735 80892595 - lincRNA NOVEL OTTHUMG00000177012.1 63861 2538 13 ENSG00000103121.7 CMC2 chr16 80966448 81020270 - protein_coding KNOWN OTTHUMG00000137625.5 53823 12781 105 ENSG00000278985.1 RP11-303E16.9 chr16 80982319 80984094 - TEC KNOWN OTTHUMG00000176490.1 1776 1776 1 ENSG00000166451.12 CENPN chr16 81006498 81033114 + protein_coding KNOWN OTTHUMG00000137628.2 26617 3568 68 ENSG00000260213.4 RP11-303E16.3 chr16 81016792 81035759 - antisense NOVEL OTTHUMG00000176468.1 18968 1401 11 ENSG00000261061.1 RP11-303E16.2 chr16 81030770 81031485 + sense_intronic NOVEL OTTHUMG00000176424.1 716 716 1 ENSG00000166454.8 ATMIN chr16 81035847 81047358 + protein_coding KNOWN OTTHUMG00000176469.2 11512 6262 19 ENSG00000166455.12 C16orf46 chr16 81053497 81077267 - protein_coding KNOWN OTTHUMG00000137629.3 23771 2376 13 ENSG00000260643.1 RP11-303E16.8 chr16 81053665 81087651 - processed_transcript NOVEL OTTHUMG00000176470.1 33987 773 4 ENSG00000261141.1 RP11-303E16.5 chr16 81055301 81056426 + antisense NOVEL OTTHUMG00000176471.1 1126 593 2 ENSG00000236809.2 SNX25P1 chr1 211417025 211417934 + unprocessed_pseudogene KNOWN OTTHUMG00000037000.1 910 834 2 ENSG00000261838.4 RP11-303E16.6 chr16 81069854 81076598 + antisense NOVEL OTTHUMG00000176472.1 6745 496 4 ENSG00000245059.2 RP11-303E16.7 chr16 81077319 81078861 + lincRNA NOVEL OTTHUMG00000176473.1 1543 1088 2 ENSG00000140905.8 GCSH chr16 81081961 81096403 - protein_coding KNOWN OTTHUMG00000137626.2 14443 1880 24 ENSG00000166473.15 PKD1L2 chr16 81100875 81220370 - polymorphic_pseudogene KNOWN OTTHUMG00000166126.4 119496 18637 211 ENSG00000252608.1 RNU6-1191P chr16 81106533 81106639 - snRNA KNOWN NA 107 107 1 ENSG00000279362.1 PKD1L2 chr16 81170740 81181213 - protein_coding KNOWN NA 10474 921 7 ENSG00000135697.8 BCO1 chr16 81238448 81291142 + protein_coding KNOWN OTTHUMG00000137630.2 52695 2930 25 ENSG00000280182.1 RP11-626G3.1 chr16 81261924 81264091 - TEC KNOWN OTTHUMG00000176491.1 2168 2168 1 ENSG00000260495.1 RP11-55K13.1 chr16 81310731 81313423 - antisense NOVEL OTTHUMG00000176492.1 2693 2693 1 ENSG00000261609.3 GAN chr16 81314952 81390884 + protein_coding KNOWN OTTHUMG00000137627.3 75933 15406 13 ENSG00000238137.2 ARPC3P2 chr1 211442274 211442806 + processed_pseudogene KNOWN OTTHUMG00000037003.1 533 533 1 ENSG00000273048.1 MIR4720 chr16 81385018 81385093 + miRNA KNOWN NA 76 76 1 ENSG00000272923.1 RP11-391L3.1 chr16 81385463 81387560 + lincRNA NOVEL OTTHUMG00000176271.2 2098 754 2 ENSG00000153815.15 CMIP chr16 81445170 81711762 + protein_coding KNOWN OTTHUMG00000176520.4 266593 12715 123 ENSG00000279021.1 RP11-391L3.4 chr16 81463892 81464859 - TEC KNOWN OTTHUMG00000176521.1 968 968 1 ENSG00000260229.1 RP11-391L3.5 chr16 81476023 81476519 - processed_pseudogene KNOWN OTTHUMG00000176522.1 497 497 1 ENSG00000279476.1 RP11-391L3.3 chr16 81517824 81520617 + TEC KNOWN OTTHUMG00000176524.1 2794 2794 1 ENSG00000277255.1 MIR7854 chr16 81533902 81533966 + miRNA KNOWN NA 65 65 1 ENSG00000275109.1 MIR6504 chr16 81611348 81611408 + miRNA KNOWN NA 61 61 1 ENSG00000279681.1 RP11-274A11.5 chr16 81617038 81617543 - TEC KNOWN OTTHUMG00000176527.1 506 506 1 ENSG00000279294.1 RP11-274A11.3 chr16 81618505 81620563 + TEC KNOWN OTTHUMG00000176528.1 2059 2059 1 ENSG00000270601.3 PRAMEF5 chr1 13254198 13263435 + protein_coding KNOWN OTTHUMG00000184604.3 9238 1855 7 ENSG00000198570.5 RD3 chr1 211476522 211492917 - protein_coding KNOWN OTTHUMG00000037002.1 16396 4266 5 ENSG00000279841.1 RP11-274A11.4 chr16 81630193 81632038 + TEC KNOWN OTTHUMG00000176529.1 1846 1846 1 ENSG00000261218.4 RP11-960L18.1 chr16 81738248 81767868 + lincRNA NOVEL OTTHUMG00000176531.2 29621 1934 23 ENSG00000197943.8 PLCG2 chr16 81739097 81962693 + protein_coding KNOWN OTTHUMG00000176532.2 223597 13416 147 ENSG00000260682.3 7SK chr16 81961926 81962243 + misc_RNA NOVEL NA 318 318 1 ENSG00000276519.1 RP11-510J16.6 chr16 81987948 81989016 + lincRNA NOVEL OTTHUMG00000187036.1 1069 354 2 ENSG00000184860.8 SDR42E1 chr16 81988855 82011488 - protein_coding KNOWN OTTHUMG00000166148.3 22634 11911 11 ENSG00000086696.9 HSD17B2 chr16 82035004 82098534 + protein_coding KNOWN OTTHUMG00000137631.4 63531 9550 21 ENSG00000261235.1 RP11-510J16.5 chr16 82044336 82139631 - antisense NOVEL OTTHUMG00000176574.1 95296 1030 7 ENSG00000263636.1 AC138304.1 chr16 82111053 82111153 + miRNA NOVEL NA 101 101 1 ENSG00000260161.1 CTD-2588J6.1 chr16 82120638 82121769 - processed_pseudogene KNOWN OTTHUMG00000176576.1 1132 1132 1 ENSG00000223649.1 RP11-359E8.3 chr1 211492255 211492917 + lincRNA NOVEL OTTHUMG00000041463.1 663 491 2 ENSG00000135698.8 MPHOSPH6 chr16 82147798 82170226 - protein_coding KNOWN OTTHUMG00000137632.2 22429 2190 35 ENSG00000261029.1 CTD-2588J6.2 chr16 82170296 82175803 + lincRNA NOVEL OTTHUMG00000176577.1 5508 424 2 ENSG00000251888.1 RN7SKP190 chr16 82192505 82192790 - misc_RNA KNOWN NA 286 286 1 ENSG00000264502.1 AC024590.1 chr16 82347507 82347579 - miRNA NOVEL NA 73 73 1 ENSG00000259873.1 RP11-481E4.1 chr16 82434828 82435381 + processed_pseudogene KNOWN OTTHUMG00000176578.1 554 554 1 ENSG00000261285.4 RP11-481E4.2 chr16 82495993 82510919 - lincRNA NOVEL OTTHUMG00000176579.1 14927 766 7 ENSG00000261176.1 RP11-2L4.1 chr16 82554049 82575210 - lincRNA NOVEL OTTHUMG00000176580.1 21162 504 3 ENSG00000140945.14 CDH13 chr16 82626803 83800640 + protein_coding KNOWN OTTHUMG00000176635.2 1173838 11217 130 ENSG00000277387.1 MIR8058 chr16 82688931 82689019 + miRNA KNOWN NA 89 89 1 ENSG00000280044.1 RP11-22H5.1 chr16 82727474 82727694 + TEC KNOWN OTTHUMG00000176636.1 221 221 1 ENSG00000170385.9 SLC30A1 chr1 211571568 211578742 - protein_coding KNOWN OTTHUMG00000036995.3 7175 5474 2 ENSG00000260862.1 RP11-22H5.2 chr16 82773319 82829638 + sense_intronic NOVEL OTTHUMG00000176637.1 56320 4037 3 ENSG00000221395.1 AC099506.1 chr16 82842086 82842200 + miRNA NOVEL NA 115 115 1 ENSG00000263360.2 RN7SL134P chr16 82844455 82844757 + misc_RNA KNOWN NA 303 303 1 ENSG00000260832.1 CTD-3253I12.1 chr16 82953230 82990298 - antisense NOVEL OTTHUMG00000176638.1 37069 1493 3 ENSG00000261410.1 RP11-543N12.1 chr16 83383007 83398170 - antisense NOVEL OTTHUMG00000176639.1 15164 719 6 ENSG00000263785.1 MIR3182 chr16 83508346 83508408 + miRNA KNOWN NA 63 63 1 ENSG00000261103.1 RP11-298D21.3 chr16 83710179 83717898 - antisense NOVEL OTTHUMG00000176640.1 7720 566 3 ENSG00000260788.4 RP11-298D21.1 chr16 83721119 83772936 - antisense NOVEL OTTHUMG00000176641.1 51818 1833 12 ENSG00000259914.1 RP11-298D21.2 chr16 83725676 83726377 - antisense NOVEL OTTHUMG00000176642.1 702 702 1 ENSG00000260228.4 RP11-483P21.2 chr16 83789967 83807834 - antisense NOVEL OTTHUMG00000176643.1 17868 1603 9 ENSG00000261314.1 RP11-359E8.5 chr1 211583015 211583725 - sense_overlapping NOVEL OTTHUMG00000176327.1 711 711 1 ENSG00000230989.5 HSBP1 chr16 83807843 83819737 + protein_coding KNOWN OTTHUMG00000176653.2 11895 9525 13 ENSG00000103150.5 MLYCD chr16 83899126 83927026 + protein_coding KNOWN OTTHUMG00000176654.2 27901 16161 6 ENSG00000260300.4 RP11-505K9.4 chr16 83908132 83951445 + protein_coding NOVEL OTTHUMG00000176811.3 43314 3055 21 ENSG00000260932.1 RP11-483P21.6 chr16 83929796 83931223 - antisense NOVEL OTTHUMG00000176656.2 1428 563 4 ENSG00000140961.11 OSGIN1 chr16 83948282 83966332 + protein_coding KNOWN OTTHUMG00000137640.4 18051 3460 36 ENSG00000103154.8 NECAB2 chr16 83968632 84002776 + protein_coding KNOWN OTTHUMG00000137636.2 34145 2520 39 ENSG00000166558.9 SLC38A8 chr16 84009667 84042636 - protein_coding KNOWN OTTHUMG00000176588.1 32970 1819 23 ENSG00000199350.1 RNA5SP432 chr16 84039918 84040033 - rRNA KNOWN NA 116 116 1 ENSG00000140943.15 MBTPS1 chr16 84053761 84116906 - protein_coding KNOWN OTTHUMG00000137639.4 63146 10238 86 ENSG00000274677.1 RP11-505K9.5 chr16 84085979 84086590 - sense_intronic NOVEL OTTHUMG00000187047.1 612 612 1 ENSG00000228792.2 RP11-354K1.2 chr1 211635906 211642867 - lincRNA NOVEL OTTHUMG00000037001.2 6962 585 2 ENSG00000260018.1 RP11-505K9.1 chr16 84117051 84117571 + antisense NOVEL OTTHUMG00000176278.1 521 521 1 ENSG00000260410.2 RP11-505K9.3 chr16 84119293 84121153 + processed_pseudogene KNOWN OTTHUMG00000176664.2 1861 1015 2 ENSG00000103160.10 HSDL1 chr16 84122146 84145192 - protein_coding KNOWN OTTHUMG00000137635.5 23047 4507 31 ENSG00000154099.16 DNAAF1 chr16 84145287 84178767 + protein_coding KNOWN OTTHUMG00000128517.3 33481 7783 62 ENSG00000103168.15 TAF1C chr16 84177847 84187070 - protein_coding KNOWN OTTHUMG00000176665.2 9224 5577 193 ENSG00000140955.9 ADAD2 chr16 84191138 84197168 + protein_coding KNOWN OTTHUMG00000137637.2 6031 4111 54 ENSG00000250685.6 RP11-486L19.2 chr16 84192558 84197053 - antisense NOVEL OTTHUMG00000176733.1 4496 2870 13 ENSG00000168418.7 KCNG4 chr16 84218667 84239750 - protein_coding KNOWN OTTHUMG00000137638.3 21084 6553 5 ENSG00000260858.1 RP11-558A11.1 chr16 84255270 84261049 - lincRNA NOVEL OTTHUMG00000176734.1 5780 463 3 ENSG00000201361.1 RNA5SP433 chr16 84262815 84262928 - rRNA KNOWN NA 114 114 1 ENSG00000227764.1 RP11-354K1.1 chr1 211639695 211654581 + lincRNA NOVEL OTTHUMG00000036999.1 14887 1204 5 ENSG00000103175.9 WFDC1 chr16 84294646 84329851 + protein_coding KNOWN OTTHUMG00000137641.4 35206 8785 20 ENSG00000260530.1 RP11-558A11.2 chr16 84295498 84296985 - antisense NOVEL OTTHUMG00000176735.1 1488 416 2 ENSG00000260504.1 RP11-558A11.3 chr16 84342464 84343407 - lincRNA NOVEL OTTHUMG00000176736.1 944 469 2 ENSG00000064270.11 ATP2C2 chr16 84368527 84464187 + protein_coding KNOWN OTTHUMG00000176737.2 95661 7352 147 ENSG00000261286.1 RP11-517C16.2 chr16 84459259 84467361 - antisense NOVEL OTTHUMG00000176738.1 8103 2998 3 ENSG00000140950.14 TLDC1 chr16 84476421 84554033 - protein_coding KNOWN OTTHUMG00000176739.2 77613 8159 48 ENSG00000261243.1 RP11-517C16.4 chr16 84495599 84497495 + antisense NOVEL OTTHUMG00000176740.1 1897 596 2 ENSG00000103187.7 COTL1 chr16 84565594 84618077 - protein_coding KNOWN OTTHUMG00000137634.4 52484 6762 15 ENSG00000261471.1 RP11-61F12.1 chr16 84594393 84596826 + antisense NOVEL OTTHUMG00000176769.1 2434 2434 1 ENSG00000135686.11 KLHL36 chr16 84648525 84667686 + protein_coding KNOWN OTTHUMG00000137642.2 19162 9995 23 ENSG00000222080.1 AL356310.1 chr1 211653456 211653549 - miRNA NOVEL NA 94 94 1 ENSG00000103194.14 USP10 chr16 84699978 84779922 + protein_coding KNOWN OTTHUMG00000176770.4 79945 5083 117 ENSG00000103196.10 CRISPLD2 chr16 84819984 84920768 + protein_coding KNOWN OTTHUMG00000137644.4 100785 7965 84 ENSG00000260859.1 RP11-254F19.2 chr16 84828263 84829242 + sense_intronic NOVEL OTTHUMG00000176783.1 980 260 2 ENSG00000265249.1 AC025280.1 chr16 84852968 84853067 + miRNA NOVEL NA 100 100 1 ENSG00000279622.1 RP11-254F19.4 chr16 84917377 84919923 - TEC KNOWN OTTHUMG00000176803.1 2547 2547 1 ENSG00000260340.1 RP11-254F19.3 chr16 84928353 84939603 + lincRNA NOVEL OTTHUMG00000176804.1 11251 598 3 ENSG00000153786.11 ZDHHC7 chr16 84974181 85011535 - protein_coding KNOWN OTTHUMG00000137645.2 37355 3947 44 ENSG00000135709.11 KIAA0513 chr16 85027751 85094230 + protein_coding KNOWN OTTHUMG00000176597.2 66480 8837 59 ENSG00000153789.11 FAM92B chr16 85098358 85112508 - protein_coding KNOWN OTTHUMG00000187060.1 14151 1904 24 ENSG00000278214.1 RP11-442O1.4 chr16 85137150 85149443 + lincRNA NOVEL OTTHUMG00000187071.1 12294 2005 3 ENSG00000117650.11 NEK2 chr1 211658657 211675630 - protein_coding KNOWN OTTHUMG00000037121.2 16974 3095 31 ENSG00000275088.1 RP11-442O1.3 chr16 85142696 85146001 - lincRNA NOVEL OTTHUMG00000187070.1 3306 3306 1 ENSG00000276331.1 AC092275.1 chr16 85160295 85160381 + miRNA NOVEL NA 87 87 1 ENSG00000262601.1 CTC-786C10.1 chr16 85171276 85185363 + lincRNA NOVEL OTTHUMG00000177699.2 14088 777 2 ENSG00000270313.1 COX6CP16 chr16 85278820 85279035 - processed_pseudogene KNOWN OTTHUMG00000184814.1 216 216 1 ENSG00000179219.5 LINC00311 chr16 85282958 85285963 + lincRNA KNOWN OTTHUMG00000137643.1 3006 1566 2 ENSG00000266307.1 MIR5093 chr16 85306226 85306325 - miRNA KNOWN NA 100 100 1 ENSG00000261567.1 RP11-680G10.1 chr16 85357463 85359449 + lincRNA NOVEL OTTHUMG00000176987.1 1987 289 2 ENSG00000264203.1 AC092377.1 chr16 85441423 85441492 - miRNA NOVEL NA 70 70 1 ENSG00000278716.1 LA16c-352F7.1 chr16 85489813 85490831 + lincRNA NOVEL OTTHUMG00000187072.1 1019 1019 1 ENSG00000270124.1 RP11-118F19.1 chr16 85580009 85583571 - lincRNA NOVEL OTTHUMG00000183874.1 3563 601 3 ENSG00000224763.1 FDPSP8 chr1 211660189 211661277 - processed_pseudogene KNOWN OTTHUMG00000037004.1 1089 1089 1 ENSG00000260417.1 CTD-2542L18.1 chr16 85592266 85595720 + lincRNA NOVEL OTTHUMG00000176284.1 3455 3455 1 ENSG00000131149.16 GSE1 chr16 85611409 85676204 + protein_coding KNOWN OTTHUMG00000137650.3 64796 10173 85 ENSG00000263968.2 RN7SL381P chr16 85659378 85659675 + misc_RNA KNOWN NA 298 298 1 ENSG00000131153.7 GINS2 chr16 85676198 85690073 - protein_coding KNOWN OTTHUMG00000137646.2 13876 3264 13 ENSG00000154102.9 C16orf74 chr16 85690084 85751129 - protein_coding KNOWN OTTHUMG00000183875.1 61046 2181 24 ENSG00000275393.1 RP11-568J23.8 chr16 85697335 85697868 - sense_intronic NOVEL OTTHUMG00000187073.1 534 534 1 ENSG00000269898.1 RP11-568J23.4 chr16 85743287 85744225 + antisense NOVEL OTTHUMG00000183876.1 939 498 2 ENSG00000131148.7 EMC8 chr16 85771758 85799608 - protein_coding KNOWN OTTHUMG00000137647.2 27851 4021 20 ENSG00000252311.1 RNU1-103P chr16 85781775 85781899 - snRNA KNOWN NA 125 125 1 ENSG00000270184.1 RP11-568J23.5 chr16 85784382 85787617 + antisense NOVEL OTTHUMG00000183877.1 3236 689 2 ENSG00000231057.3 RP11-122M14.1 chr1 211675762 211690103 + antisense NOVEL OTTHUMG00000037123.2 14342 2452 13 ENSG00000270159.1 RP11-568J23.6 chr16 85792415 85792933 + antisense NOVEL OTTHUMG00000183878.1 519 408 2 ENSG00000131143.7 COX4I1 chr16 85798633 85807044 + protein_coding KNOWN OTTHUMG00000137649.5 8412 4792 65 ENSG00000270698.1 RP11-568J23.7 chr16 85814425 85815062 - processed_pseudogene KNOWN OTTHUMG00000184813.1 638 315 2 ENSG00000214259.3 RP11-568J23.1 chr16 85815873 85816536 - processed_pseudogene KNOWN OTTHUMG00000158265.1 664 664 1 ENSG00000279907.1 RP11-568J23.2 chr16 85859521 85862012 + TEC KNOWN OTTHUMG00000175696.1 2492 2492 1 ENSG00000140968.9 IRF8 chr16 85898803 85922609 + protein_coding KNOWN OTTHUMG00000137648.7 23807 5162 48 ENSG00000274134.1 MIR6774 chr16 85918347 85918416 + miRNA KNOWN NA 70 70 1 ENSG00000268804.1 RP11-542M13.3 chr16 85935281 85936223 - lincRNA NOVEL OTTHUMG00000183858.1 943 750 2 ENSG00000269667.1 RP11-542M13.2 chr16 85981750 85984723 + lincRNA NOVEL OTTHUMG00000183859.1 2974 474 2 ENSG00000279604.1 RP11-542M13.1 chr16 86035627 86036419 + TEC KNOWN OTTHUMG00000183860.1 793 793 1 ENSG00000231219.1 RP11-219C24.8 chr1 13273539 13275627 - unprocessed_pseudogene KNOWN OTTHUMG00000008039.2 2089 1068 2 ENSG00000226868.1 RP11-122M14.3 chr1 211715928 211725402 - lincRNA NOVEL OTTHUMG00000037125.1 9475 174 2 ENSG00000261177.1 RP11-805I24.1 chr16 86081409 86089526 - lincRNA NOVEL OTTHUMG00000176285.1 8118 7430 2 ENSG00000268078.1 RP11-805I24.4 chr16 86158206 86158798 - lincRNA NOVEL OTTHUMG00000183861.1 593 479 2 ENSG00000268505.1 RP11-805I24.3 chr16 86192793 86198913 - lincRNA NOVEL OTTHUMG00000183862.1 6121 4039 3 ENSG00000269186.1 LINC01082 chr16 86196181 86199720 + lincRNA NOVEL OTTHUMG00000183863.1 3540 441 2 ENSG00000270058.1 RP11-514D23.3 chr16 86221423 86222729 - lincRNA NOVEL OTTHUMG00000183864.1 1307 564 2 ENSG00000268754.1 RP11-514D23.2 chr16 86225580 86275745 - lincRNA NOVEL OTTHUMG00000183865.1 50166 465 5 ENSG00000199949.2 Y_RNA chr16 86275429 86275523 - misc_RNA NOVEL NA 95 95 1 ENSG00000268532.1 RP11-514D23.1 chr16 86286427 86293389 + lincRNA NOVEL OTTHUMG00000183866.1 6963 2065 3 ENSG00000168367.8 LINC00917 chr16 86331844 86349683 - lincRNA NOVEL OTTHUMG00000183867.1 17840 3179 32 ENSG00000269826.1 RP11-158I3.3 chr16 86347387 86349611 + lincRNA NOVEL OTTHUMG00000183868.1 2225 901 3 ENSG00000123684.11 LPGAT1 chr1 211743457 211830772 - protein_coding KNOWN OTTHUMG00000037120.1 87316 8799 21 ENSG00000268473.1 RP11-158I3.1 chr16 86434830 86435884 - processed_pseudogene KNOWN OTTHUMG00000183869.1 1055 744 2 ENSG00000268388.4 FENDRR chr16 86474529 86509099 - lincRNA KNOWN OTTHUMG00000183870.2 34571 6795 20 ENSG00000103241.6 FOXF1 chr16 86510527 86515418 + protein_coding KNOWN OTTHUMG00000137651.4 4892 3516 2 ENSG00000277360.1 AC009108.2 chr16 86510780 86510877 - miRNA NOVEL NA 98 98 1 ENSG00000270020.1 RP11-463O9.9 chr16 86520383 86523897 - lincRNA NOVEL OTTHUMG00000183899.1 3515 3515 1 ENSG00000243697.1 RP11-463O9.1 chr16 86525457 86526252 + processed_pseudogene KNOWN OTTHUMG00000158270.1 796 796 1 ENSG00000103248.16 MTHFSD chr16 86530176 86555235 - protein_coding KNOWN OTTHUMG00000176480.3 25060 6863 107 ENSG00000280278.1 FLJ30679 chr16 86555320 86557299 + TEC KNOWN OTTHUMG00000183871.1 1980 1980 1 ENSG00000260944.1 FOXC2-AS1 chr16 86565145 86567761 - antisense NOVEL OTTHUMG00000176481.1 2617 319 2 ENSG00000176692.5 FOXC2 chr16 86567251 86569728 + protein_coding KNOWN OTTHUMG00000137652.2 2478 2478 1 ENSG00000241395.3 RN7SL344P chr1 211792111 211792406 - misc_RNA KNOWN NA 296 296 1 ENSG00000176678.5 FOXL1 chr16 86576368 86582160 + protein_coding KNOWN OTTHUMG00000137653.3 5793 3742 3 ENSG00000279142.1 RP11-463O9.2 chr16 86595189 86597639 + TEC KNOWN OTTHUMG00000176296.1 2451 2451 1 ENSG00000275934.1 AC009108.1 chr16 86613416 86613498 - miRNA NOVEL NA 83 83 1 ENSG00000260387.1 RP11-463O9.6 chr16 86636328 86637145 - lincRNA NOVEL OTTHUMG00000176482.1 818 269 2 ENSG00000261161.1 RP11-58A18.1 chr16 86646301 86668923 + lincRNA NOVEL OTTHUMG00000176483.1 22623 508 3 ENSG00000274478.1 RP11-58A18.2 chr16 86698118 86698841 + lincRNA NOVEL OTTHUMG00000187077.1 724 724 1 ENSG00000260026.1 CTD-2015G9.1 chr16 86720688 86721954 - lincRNA NOVEL OTTHUMG00000176294.1 1267 506 2 ENSG00000261175.4 CTD-2015G9.2 chr16 86722091 86741059 + lincRNA NOVEL OTTHUMG00000176484.2 18969 3891 7 ENSG00000260795.1 RP11-107C10.1 chr16 86906175 86906472 - processed_pseudogene KNOWN OTTHUMG00000176394.1 298 298 1 ENSG00000232190.2 RP11-134D3.1 chr16 87057784 87063991 + lincRNA NOVEL OTTHUMG00000175678.1 6208 4083 3 ENSG00000212205.1 Y_RNA chr1 211803017 211803104 + misc_RNA NOVEL NA 88 88 1 ENSG00000261363.2 RP11-134D3.2 chr16 87066705 87069752 + lincRNA NOVEL OTTHUMG00000175679.2 3048 464 2 ENSG00000260456.5 C16orf95 chr16 87083562 87317420 - protein_coding KNOWN OTTHUMG00000175680.1 233859 3670 30 ENSG00000261095.1 RP11-899L11.1 chr16 87212122 87226430 + lincRNA NOVEL OTTHUMG00000175681.1 14309 1447 3 ENSG00000261651.1 RP11-899L11.3 chr16 87215915 87216452 + antisense NOVEL OTTHUMG00000175682.1 538 378 2 ENSG00000261697.4 RP11-178L8.5 chr16 87262759 87292438 - sense_intronic NOVEL OTTHUMG00000175683.1 29680 2424 14 ENSG00000243705.1 RP11-178L8.1 chr16 87268185 87268337 + processed_pseudogene KNOWN OTTHUMG00000158271.1 153 153 1 ENSG00000280419.1 RP11-178L8.6 chr16 87296949 87297633 + TEC KNOWN OTTHUMG00000176298.1 685 685 1 ENSG00000131152.4 RP11-178L8.4 chr16 87302876 87334273 - protein_coding PUTATIVE OTTHUMG00000175684.1 31398 953 5 ENSG00000270006.2 RP11-178L8.7 chr16 87317509 87318043 + antisense NOVEL OTTHUMG00000183879.2 535 401 2 ENSG00000103264.14 FBXO31 chr16 87326987 87392142 - protein_coding KNOWN OTTHUMG00000175685.2 65156 6810 42 ENSG00000229258.4 RP11-552D8.1 chr1 211829846 211853703 + antisense NOVEL OTTHUMG00000037122.1 23858 1359 18 ENSG00000270082.1 RP11-178L8.8 chr16 87326987 87327584 + antisense NOVEL OTTHUMG00000183881.1 598 465 2 ENSG00000269901.1 RP11-178L8.9 chr16 87362536 87367476 + antisense NOVEL OTTHUMG00000183882.1 4941 450 2 ENSG00000140941.11 MAP1LC3B chr16 87383995 87404779 + protein_coding KNOWN OTTHUMG00000137654.3 20785 5313 29 ENSG00000261592.1 RP11-178L8.3 chr16 87396704 87400295 - antisense NOVEL OTTHUMG00000175686.1 3592 513 2 ENSG00000140948.10 ZCCHC14 chr16 87406246 87492045 - protein_coding KNOWN OTTHUMG00000137655.2 85800 7390 39 ENSG00000276393.1 RP11-106D4.3 chr16 87467138 87467654 + unprocessed_pseudogene KNOWN OTTHUMG00000187989.1 517 517 1 ENSG00000276337.1 RP11-106D4.2 chr16 87470370 87474370 - sense_intronic NOVEL OTTHUMG00000187080.1 4001 4001 1 ENSG00000260750.4 RP11-482M8.1 chr16 87492555 87515635 + lincRNA NOVEL OTTHUMG00000175695.1 23081 1356 11 ENSG00000269935.1 RP11-482M8.3 chr16 87600526 87602190 - antisense NOVEL OTTHUMG00000183883.1 1665 1665 1 ENSG00000154118.11 JPH3 chr16 87601835 87698156 + protein_coding KNOWN OTTHUMG00000137656.3 96322 5941 17 ENSG00000233626.2 RP11-565J7.1 chr1 211936249 211936634 + processed_pseudogene KNOWN OTTHUMG00000037118.2 386 386 1 ENSG00000277504.1 RP11-278A23.4 chr16 87683945 87684477 - antisense NOVEL OTTHUMG00000187083.1 533 533 1 ENSG00000226180.3 RP11-278A23.1 chr16 87693537 87696147 - lincRNA NOVEL OTTHUMG00000168510.2 2611 2611 1 ENSG00000104731.12 KLHDC4 chr16 87696485 87765992 - protein_coding KNOWN OTTHUMG00000137657.2 69508 11177 166 ENSG00000260671.2 RP11-278A23.2 chr16 87739771 87747706 - sense_intronic NOVEL OTTHUMG00000176381.2 7936 338 3 ENSG00000260498.4 RP4-536B24.4 chr16 87773488 87779374 - lincRNA NOVEL OTTHUMG00000176390.1 5887 802 6 ENSG00000260177.1 RP4-536B24.3 chr16 87780134 87806476 - lincRNA NOVEL OTTHUMG00000176391.1 26343 756 2 ENSG00000103257.7 SLC7A5 chr16 87830023 87869488 - protein_coding KNOWN OTTHUMG00000137658.3 39466 4745 23 ENSG00000278598.1 MIR6775 chr16 87834592 87834660 - miRNA KNOWN NA 69 69 1 ENSG00000260466.1 RP4-536B24.2 chr16 87836532 87837663 + antisense NOVEL OTTHUMG00000176392.1 1132 522 2 ENSG00000174990.4 CA5A chr16 87881546 87936529 - protein_coding KNOWN OTTHUMG00000137677.3 54984 7981 12 ENSG00000143493.11 INTS7 chr1 211940399 212035542 - protein_coding KNOWN OTTHUMG00000037119.3 95144 5311 126 ENSG00000260603.1 GS1-21A4.1 chr16 87892938 87893685 - sense_intronic NOVEL OTTHUMG00000175549.1 748 420 2 ENSG00000270385.1 GS1-21A4.2 chr16 87892955 87893735 + processed_pseudogene KNOWN OTTHUMG00000184801.1 781 467 2 ENSG00000260443.1 CTD-3057O21.1 chr16 87945058 87945202 - processed_pseudogene KNOWN OTTHUMG00000175538.2 145 145 1 ENSG00000172530.18 BANP chr16 87949244 88118422 + protein_coding KNOWN OTTHUMG00000137678.8 169179 8196 168 ENSG00000261193.1 RP11-863P13.5 chr16 88079161 88087383 - lincRNA NOVEL OTTHUMG00000175539.1 8223 559 2 ENSG00000260166.1 RP11-863P13.6 chr16 88087387 88087932 + lincRNA NOVEL OTTHUMG00000175540.1 546 213 2 ENSG00000205037.2 RP11-863P13.4 chr16 88088041 88100985 - lincRNA NOVEL OTTHUMG00000175541.1 12945 3616 4 ENSG00000260162.2 RP11-863P13.1 chr16 88177289 88178646 + lincRNA NOVEL OTTHUMG00000175542.2 1358 608 2 ENSG00000261327.4 RP11-863P13.3 chr16 88177298 88178941 - lincRNA NOVEL OTTHUMG00000175543.1 1644 1507 3 ENSG00000261816.1 RP11-863P13.2 chr16 88191486 88193667 - lincRNA NOVEL OTTHUMG00000175544.1 2182 444 3 ENSG00000212187.1 SNORA26 chr1 212025561 212025682 + snoRNA NOVEL NA 122 122 1 ENSG00000260420.2 LA16c-444G7.2 chr16 88194281 88195217 + lincRNA NOVEL OTTHUMG00000175545.2 937 498 3 ENSG00000261273.1 LA16c-444G7.1 chr16 88234785 88302511 + lincRNA NOVEL OTTHUMG00000175546.1 67727 434 4 ENSG00000225614.2 ZNF469 chr16 88427471 88440757 + protein_coding KNOWN OTTHUMG00000173151.4 13287 13287 3 ENSG00000179588.7 ZFPM1 chr16 88453317 88537016 + protein_coding KNOWN OTTHUMG00000173152.4 83700 6110 28 ENSG00000263456.1 MIR5189 chr16 88468918 88469031 + miRNA KNOWN NA 114 114 1 ENSG00000261744.1 RP11-21B21.4 chr16 88512960 88531053 - antisense NOVEL OTTHUMG00000173240.1 18094 733 4 ENSG00000158545.14 ZC3H18 chr16 88570381 88631966 + protein_coding KNOWN OTTHUMG00000137679.7 61586 8648 77 ENSG00000124391.4 IL17C chr16 88638591 88640473 + protein_coding KNOWN OTTHUMG00000173241.1 1883 1379 5 ENSG00000051523.9 CYBA chr16 88643283 88651152 - protein_coding KNOWN OTTHUMG00000173320.3 7870 3357 48 ENSG00000167508.9 MVD chr16 88651935 88663161 - protein_coding KNOWN OTTHUMG00000137865.4 11227 4717 91 ENSG00000143476.16 DTL chr1 212035553 212107400 + protein_coding KNOWN OTTHUMG00000037133.1 71848 4916 50 ENSG00000260630.5 SNAI3-AS1 chr16 88663298 88687186 + antisense NOVEL OTTHUMG00000173242.3 23889 5037 17 ENSG00000185669.5 SNAI3 chr16 88677682 88686493 - protein_coding KNOWN OTTHUMG00000173243.1 8812 1732 3 ENSG00000280603.1 AC138028.1 chr16 88686544 88687053 - protein_coding NOVEL NA 510 72 2 ENSG00000158717.9 RNF166 chr16 88696495 88706421 - protein_coding KNOWN OTTHUMG00000137863.7 9927 4394 40 ENSG00000259813.1 RP5-1142A6.5 chr16 88696501 88698610 + antisense NOVEL OTTHUMG00000173416.1 2110 213 2 ENSG00000174177.11 CTU2 chr16 88706463 88715386 + protein_coding KNOWN OTTHUMG00000173417.2 8924 3532 90 ENSG00000278341.1 RP5-1142A6.10 chr16 88708956 88710437 - antisense NOVEL OTTHUMG00000187091.1 1482 1482 1 ENSG00000103335.18 PIEZO1 chr16 88715343 88785211 - protein_coding KNOWN OTTHUMG00000156776.8 69869 10855 117 ENSG00000265672.1 MIR4722 chr16 88716278 88716337 - miRNA KNOWN NA 60 60 1 ENSG00000260121.1 RP5-1142A6.9 chr16 88718615 88720459 + antisense NOVEL OTTHUMG00000175691.1 1845 1845 1 ENSG00000220749.4 RPL21P28 chr1 212051524 212052006 - processed_pseudogene KNOWN OTTHUMG00000037130.1 483 483 1 ENSG00000224888.4 RP5-1142A6.2 chr16 88731180 88741425 + antisense NOVEL OTTHUMG00000156775.4 10246 4797 5 ENSG00000260617.1 RP5-1142A6.7 chr16 88741631 88742367 + antisense NOVEL OTTHUMG00000173434.1 737 558 2 ENSG00000182376.2 RP5-1142A6.8 chr16 88742767 88745748 + antisense NOVEL OTTHUMG00000173435.1 2982 2238 5 ENSG00000167513.7 CDT1 chr16 88803213 88809258 + protein_coding KNOWN OTTHUMG00000173467.1 6046 3336 20 ENSG00000198931.9 APRT chr16 88809339 88811944 - protein_coding KNOWN OTTHUMG00000175454.4 2606 1803 40 ENSG00000141012.11 GALNS chr16 88813734 88856970 - protein_coding KNOWN OTTHUMG00000137862.4 43237 8402 86 ENSG00000280675.1 AC092384.1 chr16 88827958 88828137 + protein_coding NOVEL NA 180 48 2 ENSG00000167515.9 TRAPPC2L chr16 88856220 88862686 + protein_coding KNOWN OTTHUMG00000137861.6 6467 4463 59 ENSG00000205022.8 PABPN1L chr16 88863333 88866660 - protein_coding KNOWN OTTHUMG00000170127.1 3328 1314 19 ENSG00000129993.13 CBFA2T3 chr16 88874858 88977204 - protein_coding KNOWN OTTHUMG00000137864.7 102347 5972 57 ENSG00000207511.1 RNU6-771P chr1 13279125 13279231 - snRNA KNOWN NA 107 107 1 ENSG00000264358.1 MIR3122 chr1 212077613 212077685 + miRNA KNOWN NA 73 73 1 ENSG00000259881.1 RP11-830F9.5 chr16 88881038 88887136 + antisense NOVEL OTTHUMG00000175521.1 6099 3057 9 ENSG00000261226.1 RP11-830F9.7 chr16 88936779 88939651 - sense_intronic NOVEL OTTHUMG00000176349.1 2873 2873 3 ENSG00000205018.2 RP11-830F9.6 chr16 88939789 88951524 + antisense NOVEL OTTHUMG00000175522.2 11736 1812 2 ENSG00000259989.1 CTD-2555A7.1 chr16 88984032 88995369 + lincRNA NOVEL OTTHUMG00000175523.1 11338 472 3 ENSG00000256982.1 CTD-2555A7.2 chr16 89046172 89052965 - lincRNA NOVEL OTTHUMG00000175614.1 6794 2154 2 ENSG00000176715.14 ACSF3 chr16 89088375 89155846 + protein_coding KNOWN OTTHUMG00000138044.8 67472 11629 101 ENSG00000261546.1 CTD-2555A7.3 chr16 89113175 89115279 - antisense NOVEL OTTHUMG00000176346.1 2105 2105 1 ENSG00000180422.3 LINC00304 chr16 89159146 89164245 + lincRNA KNOWN OTTHUMG00000175524.2 5100 3961 7 ENSG00000205015.1 RP11-46C24.3 chr16 89166383 89169147 + lincRNA NOVEL OTTHUMG00000175525.1 2765 1326 3 ENSG00000129910.6 CDH15 chr16 89171767 89195492 + protein_coding KNOWN OTTHUMG00000138045.3 23726 4628 22 ENSG00000252879.1 RN7SKP98 chr1 212099521 212099676 - misc_RNA KNOWN NA 156 156 1 ENSG00000259803.5 SLC22A31 chr16 89195761 89201664 - protein_coding KNOWN OTTHUMG00000175615.3 5904 2610 33 ENSG00000259877.2 RP11-46C24.7 chr16 89215211 89217653 - antisense NOVEL OTTHUMG00000175616.2 2443 2443 1 ENSG00000170100.12 ZNF778 chr16 89217703 89237071 + protein_coding KNOWN OTTHUMG00000175526.3 19369 11273 32 ENSG00000260659.1 RP11-46C24.6 chr16 89226807 89228692 - antisense NOVEL OTTHUMG00000175617.1 1886 403 2 ENSG00000167522.13 ANKRD11 chr16 89267627 89490561 - protein_coding KNOWN OTTHUMG00000175548.9 222935 16949 104 ENSG00000268218.1 AC137932.4 chr16 89268104 89273044 + antisense NOVEL OTTHUMG00000175557.2 4941 3660 2 ENSG00000260279.2 AC137932.5 chr16 89297508 89298317 + antisense NOVEL OTTHUMG00000175558.2 810 517 4 ENSG00000261253.2 AC137932.6 chr16 89321133 89325110 + antisense NOVEL OTTHUMG00000175559.3 3978 1360 6 ENSG00000261574.1 RP1-168P16.2 chr16 89392375 89412564 - sense_intronic NOVEL OTTHUMG00000176347.1 20190 420 2 ENSG00000261692.1 RP1-168P16.1 chr16 89420075 89422226 - sense_intronic NOVEL OTTHUMG00000176348.1 2152 415 2 ENSG00000229983.1 RP11-15I11.2 chr1 212168207 212190259 + lincRNA NOVEL OTTHUMG00000037131.1 22053 510 4 ENSG00000252887.1 RNU6-430P chr16 89443318 89443424 + snRNA KNOWN NA 107 107 1 ENSG00000270832.1 RP1-168P16.3 chr16 89458870 89459437 + processed_pseudogene KNOWN OTTHUMG00000184798.1 568 568 1 ENSG00000197912.12 SPG7 chr16 89490917 89557768 + protein_coding KNOWN OTTHUMG00000138046.8 66852 11924 131 ENSG00000261118.1 RP11-104N10.1 chr16 89492017 89504460 - antisense NOVEL OTTHUMG00000175513.3 12444 1045 5 ENSG00000274627.1 RP11-104N10.2 chr16 89516797 89522217 + sense_intronic NOVEL OTTHUMG00000187140.1 5421 5421 1 ENSG00000167526.12 RPL13 chr16 89560657 89566828 + protein_coding KNOWN OTTHUMG00000133770.7 6172 6172 62 ENSG00000200084.1 SNORD68 chr16 89561434 89561517 + snoRNA KNOWN NA 84 84 1 ENSG00000178773.13 CPNE7 chr16 89575768 89597246 + protein_coding KNOWN OTTHUMG00000138051.4 21479 3048 62 ENSG00000015413.8 DPEP1 chr16 89613308 89638456 + protein_coding KNOWN OTTHUMG00000138052.3 25149 2737 61 ENSG00000131165.13 CHMP1A chr16 89644431 89657845 - protein_coding KNOWN OTTHUMG00000169521.1 13415 3208 48 ENSG00000226251.4 RP11-15I11.3 chr1 212225278 212238977 - lincRNA NOVEL OTTHUMG00000037132.1 13700 511 8 ENSG00000167523.12 SPATA33 chr16 89657802 89671272 + protein_coding KNOWN OTTHUMG00000138048.4 13471 5746 25 ENSG00000185324.20 CDK10 chr16 89680737 89696364 + protein_coding KNOWN OTTHUMG00000138049.3 15628 6791 161 ENSG00000260259.1 RP11-368I7.4 chr16 89682620 89686569 - lincRNA NOVEL OTTHUMG00000173427.1 3950 721 3 ENSG00000275734.1 RP11-368I7.6 chr16 89684642 89685304 + antisense NOVEL OTTHUMG00000187153.1 663 663 1 ENSG00000158792.14 SPATA2L chr16 89696343 89701705 - protein_coding KNOWN OTTHUMG00000138047.2 5363 2482 10 ENSG00000075399.11 VPS9D1 chr16 89707134 89720986 - protein_coding KNOWN OTTHUMG00000173219.2 13853 3428 72 ENSG00000261373.1 VPS9D1-AS1 chr16 89711856 89718165 + antisense NOVEL OTTHUMG00000173220.1 6310 1753 6 ENSG00000158805.10 ZNF276 chr16 89720400 89740903 + protein_coding KNOWN OTTHUMG00000138050.3 20504 7427 91 ENSG00000187741.13 FANCA chr16 89737549 89816657 - protein_coding KNOWN OTTHUMG00000173049.5 79109 9736 276 ENSG00000204991.9 SPIRE2 chr16 89818179 89871319 + protein_coding KNOWN OTTHUMG00000173039.2 53141 7975 71 ENSG00000066027.10 PPP2R5A chr1 212285537 212361863 + protein_coding KNOWN OTTHUMG00000036750.4 76327 3825 39 ENSG00000141002.17 TCF25 chr16 89873586 89911384 + protein_coding KNOWN OTTHUMG00000138986.3 37799 7404 155 ENSG00000267048.1 RP11-566K11.7 chr16 89906157 89918233 + processed_transcript NOVEL OTTHUMG00000180512.1 12077 559 3 ENSG00000258839.2 MC1R chr16 89912119 89920977 + protein_coding KNOWN OTTHUMG00000171163.1 8859 5566 7 ENSG00000198211.8 TUBB3 chr16 89919165 89936092 + protein_coding NOVEL OTTHUMG00000171162.2 16928 2776 5 ENSG00000259006.1 RP11-566K11.4 chr16 89919827 89922662 - antisense NOVEL OTTHUMG00000171164.1 2836 985 2 ENSG00000258947.5 TUBB3 chr16 89921392 89938761 + protein_coding KNOWN OTTHUMG00000138985.2 17370 4430 60 ENSG00000140995.15 DEF8 chr16 89947925 89968060 + protein_coding KNOWN OTTHUMG00000138989.3 20136 6565 202 ENSG00000261317.1 RP11-566K11.5 chr16 89969791 89972544 + antisense NOVEL OTTHUMG00000173041.1 2754 1900 2 ENSG00000177946.5 CENPBD1 chr16 89969791 89972534 - protein_coding KNOWN OTTHUMG00000173040.1 2744 2744 3 ENSG00000223959.7 AFG3L1P chr16 89972586 90002161 + unitary_pseudogene KNOWN OTTHUMG00000138987.4 29576 9532 115 ENSG00000230063.1 RP11-384C4.6 chr1 212297448 212299579 + sense_intronic NOVEL OTTHUMG00000041460.1 2132 650 2 ENSG00000003249.12 DBNDD1 chr16 90004865 90020128 - protein_coding KNOWN OTTHUMG00000138984.3 15264 4791 23 ENSG00000141013.13 GAS8 chr16 90019629 90044975 + protein_coding KNOWN OTTHUMG00000138988.2 25347 5615 116 ENSG00000221819.5 GAS8-AS1 chr16 90028908 90029367 - antisense KNOWN OTTHUMG00000172804.1 460 460 2 ENSG00000222019.6 URAHP chr16 90039761 90047773 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000154575.3 8013 2340 19 ENSG00000126856.12 PRDM7 chr16 90056566 90092072 - protein_coding KNOWN OTTHUMG00000138990.4 35507 4104 29 ENSG00000261812.4 TUBB8P7 chr16 90093154 90096354 + polymorphic_pseudogene KNOWN OTTHUMG00000172847.1 3201 2466 15 ENSG00000260528.3 FAM157C chr16 90102271 90186204 + lincRNA NOVEL OTTHUMG00000172848.1 83934 5078 26 ENSG00000260507.1 RP11-356C4.3 chr16 90105095 90106316 - lincRNA NOVEL OTTHUMG00000172849.1 1222 416 2 ENSG00000261172.1 RP11-356C4.5 chr16 90110574 90168225 - lincRNA NOVEL OTTHUMG00000172850.1 57652 952 5 ENSG00000222359.1 RNU6-355P chr16 90144592 90144695 + snRNA KNOWN NA 104 104 1 ENSG00000234915.1 RP11-384C4.7 chr1 212299495 212331713 - antisense NOVEL OTTHUMG00000041461.1 32219 387 2 ENSG00000277349.1 RP11-356C4.6 chr16 90174062 90175865 - unprocessed_pseudogene KNOWN OTTHUMG00000187992.1 1804 1804 1 ENSG00000260923.4 AC137934.1 chr16 90185997 90222678 + lincRNA NOVEL OTTHUMG00000172851.2 36682 3154 16 ENSG00000280279.1 RP11-1228E12.1 chr17 64099 76866 - lincRNA NOVEL OTTHUMG00000189255.1 12768 2096 5 ENSG00000277613.1 U6 chr17 90796 90899 - snRNA NOVEL NA 104 104 1 ENSG00000280136.1 RP11-1228E12.2 chr17 97494 118578 - lincRNA NOVEL OTTHUMG00000189256.1 21085 1083 7 ENSG00000268320.3 SCGB1C2 chr17 137526 139067 + protein_coding KNOWN OTTHUMG00000189257.1 1542 478 3 ENSG00000272636.3 DOC2B chr17 142789 181636 - protein_coding KNOWN OTTHUMG00000154415.4 38848 6448 16 ENSG00000273288.1 AC108004.1 chr17 155168 155255 - miRNA NOVEL NA 88 88 1 ENSG00000273172.1 AC108004.2 chr17 183824 191587 - lincRNA NOVEL OTTHUMG00000132133.2 7764 1185 3 ENSG00000181031.14 RPH3AL chr17 212389 386254 - protein_coding KNOWN OTTHUMG00000090273.9 173866 6066 117 ENSG00000225338.1 RP11-384C4.3 chr1 212309051 212309518 - processed_pseudogene KNOWN OTTHUMG00000036748.1 468 468 1 ENSG00000262920.4 RP11-1260E13.1 chr17 321392 322453 + antisense NOVEL OTTHUMG00000177416.1 1062 432 4 ENSG00000262061.4 RP11-1260E13.4 chr17 331205 333488 + processed_transcript NOVEL OTTHUMG00000177419.1 2284 2284 11 ENSG00000262294.1 RP11-1260E13.2 chr17 352638 357581 + antisense NOVEL OTTHUMG00000177417.1 4944 748 2 ENSG00000262558.1 RP11-1260E13.3 chr17 354737 356882 + antisense NOVEL OTTHUMG00000177418.1 2146 913 2 ENSG00000241525.4 AC108004.3 chr17 404468 414023 - antisense NOVEL OTTHUMG00000132132.5 9556 1323 7 ENSG00000187624.8 C17orf97 chr17 410327 431062 + protein_coding KNOWN OTTHUMG00000132479.6 20736 2710 14 ENSG00000183688.4 FAM101B chr17 439978 445939 - protein_coding KNOWN OTTHUMG00000132483.1 5962 3621 2 ENSG00000263015.1 RP5-1029F21.3 chr17 503171 511347 + antisense NOVEL OTTHUMG00000177479.1 8177 493 3 ENSG00000141252.18 VPS53 chr17 508668 721717 - protein_coding KNOWN OTTHUMG00000177441.10 213050 20899 175 ENSG00000263300.1 RP5-1029F21.4 chr17 523140 540576 + antisense NOVEL OTTHUMG00000177482.1 17437 478 2 ENSG00000212044.2 AL360091.1 chr1 212349978 212350069 + miRNA NOVEL NA 92 92 1 ENSG00000262905.1 RP5-1029F21.2 chr17 552566 553417 + antisense NOVEL OTTHUMG00000177480.1 852 592 2 ENSG00000262708.1 RP11-411G7.2 chr17 616002 616595 + processed_pseudogene KNOWN OTTHUMG00000177456.2 594 594 1 ENSG00000244097.1 RPS4XP17 chr17 656794 657547 - processed_pseudogene KNOWN OTTHUMG00000157647.1 754 754 1 ENSG00000167695.13 FAM57A chr17 732412 742972 + protein_coding KNOWN OTTHUMG00000177491.5 10561 2740 23 ENSG00000179409.9 GEMIN4 chr17 744414 753999 - protein_coding KNOWN OTTHUMG00000177495.2 9586 5751 17 ENSG00000231784.7 DBIL5P chr17 752660 755336 + unitary_pseudogene KNOWN OTTHUMG00000132485.3 2677 2677 6 ENSG00000167699.12 GLOD4 chr17 757097 783390 - protein_coding KNOWN OTTHUMG00000177497.4 26294 5603 114 ENSG00000262228.2 RP11-676J12.4 chr17 763565 765319 - lincRNA NOVEL OTTHUMG00000177498.1 1755 1755 3 ENSG00000281182.1 AC087392.1 chr17 775201 775574 - protein_coding NOVEL NA 374 57 2 ENSG00000171861.9 RNMTL1 chr17 782273 792509 + protein_coding KNOWN OTTHUMG00000090285.2 10237 2065 12 ENSG00000201544.1 SNORA16B chr1 212352816 212352950 + snoRNA KNOWN NA 135 135 1 ENSG00000262434.1 RP11-676J12.8 chr17 789744 790525 - antisense NOVEL OTTHUMG00000177506.1 782 486 2 ENSG00000277491.1 RP11-676J12.9 chr17 795306 795794 + lincRNA NOVEL OTTHUMG00000186615.1 489 489 1 ENSG00000167693.15 NXN chr17 799313 979770 - protein_coding KNOWN OTTHUMG00000090307.4 180458 5880 53 ENSG00000262133.1 RP11-676J12.6 chr17 877902 880093 + antisense NOVEL OTTHUMG00000177502.1 2192 585 2 ENSG00000262003.1 RP11-676J12.7 chr17 909632 911212 + antisense NOVEL OTTHUMG00000177503.1 1581 820 2 ENSG00000263017.1 RP11-356I18.1 chr17 959034 959366 + processed_pseudogene KNOWN OTTHUMG00000177504.1 333 333 1 ENSG00000265403.1 AC015884.1 chr17 982036 982121 + miRNA NOVEL NA 86 86 1 ENSG00000177370.4 TIMM22 chr17 997117 1003671 + protein_coding KNOWN OTTHUMG00000180175.2 6555 3194 4 ENSG00000159842.13 ABR chr17 1003518 1229021 - protein_coding KNOWN OTTHUMG00000090313.15 225504 11709 247 ENSG00000264429.1 MIR3183 chr17 1022476 1022559 - miRNA KNOWN NA 84 84 1 ENSG00000182330.9 PRAMEF8 chr1 13281035 13285174 - protein_coding KNOWN OTTHUMG00000008037.2 4140 1937 11 ENSG00000229832.1 RP11-384C4.2 chr1 212357418 212358353 + sense_intronic NOVEL OTTHUMG00000036745.1 936 496 2 ENSG00000278794.1 Metazoa_SRP chr17 1101007 1101273 - misc_RNA NOVEL NA 267 267 1 ENSG00000275997.1 RP11-216P6.2 chr17 1155966 1156175 + processed_pseudogene KNOWN OTTHUMG00000187890.1 210 210 1 ENSG00000235361.1 AC016292.1 chr17 1181893 1185086 + antisense NOVEL OTTHUMG00000132154.1 3194 235 3 ENSG00000262213.1 AC144836.1 chr17 1241939 1254000 - lincRNA NOVEL OTTHUMG00000177512.1 12062 340 2 ENSG00000205899.3 BHLHA9 chr17 1270559 1271460 + protein_coding KNOWN OTTHUMG00000132192.1 902 902 1 ENSG00000184811.3 TUSC5 chr17 1279663 1300987 + protein_coding KNOWN OTTHUMG00000132196.2 21325 3596 3 ENSG00000108953.15 YWHAE chr17 1344272 1400378 - protein_coding KNOWN OTTHUMG00000134316.6 56107 3847 44 ENSG00000280408.1 RP11-818O24.2 chr17 1352070 1352255 + TEC KNOWN OTTHUMG00000177527.1 186 186 1 ENSG00000167193.7 CRK chr17 1420689 1463162 - protein_coding KNOWN OTTHUMG00000090317.3 42474 4090 12 ENSG00000262777.1 RP11-818O24.3 chr17 1424473 1426484 + antisense NOVEL OTTHUMG00000177528.1 2012 691 4 ENSG00000065600.11 TMEM206 chr1 212363931 212414901 - protein_coding KNOWN OTTHUMG00000036751.2 50971 2914 31 ENSG00000197879.13 MYO1C chr17 1464098 1492812 - protein_coding KNOWN OTTHUMG00000090323.13 28715 8152 230 ENSG00000132376.18 INPP5K chr17 1494571 1516888 - protein_coding KNOWN OTTHUMG00000150648.13 22318 5325 115 ENSG00000236618.2 PITPNA-AS1 chr17 1516931 1518096 + antisense NOVEL OTTHUMG00000132194.2 1166 542 2 ENSG00000174238.13 PITPNA chr17 1517718 1562816 - protein_coding KNOWN OTTHUMG00000177779.9 45099 4784 89 ENSG00000167703.13 SLC43A2 chr17 1569267 1628886 - protein_coding KNOWN OTTHUMG00000090345.7 59620 10606 90 ENSG00000243704.3 RN7SL105P chr17 1604374 1604672 - misc_RNA KNOWN NA 299 299 1 ENSG00000074660.14 SCARF1 chr17 1633858 1645747 - protein_coding KNOWN OTTHUMG00000090555.6 11890 4961 74 ENSG00000167705.10 RILP chr17 1646145 1650077 - protein_coding KNOWN OTTHUMG00000090554.3 3933 2103 20 ENSG00000174231.15 PRPF8 chr17 1650629 1684882 - protein_coding KNOWN OTTHUMG00000090553.5 34254 11355 145 ENSG00000277597.1 RP11-961A15.3 chr17 1684726 1685151 + antisense NOVEL OTTHUMG00000186785.1 426 426 1 ENSG00000117691.8 NENF chr1 212432887 212446379 + protein_coding KNOWN OTTHUMG00000036744.4 13493 1297 13 ENSG00000185561.9 TLCD2 chr17 1702790 1710438 - protein_coding KNOWN OTTHUMG00000132477.5 7649 5971 4 ENSG00000186594.11 MIR22HG chr17 1711493 1717174 - lincRNA KNOWN OTTHUMG00000132197.7 5682 2986 67 ENSG00000275595.1 AC130343.2 chr17 1713895 1714005 - miRNA NOVEL NA 111 111 1 ENSG00000167716.17 WDR81 chr17 1716523 1738599 + protein_coding KNOWN OTTHUMG00000153941.7 22077 7913 85 ENSG00000262791.1 RP11-961A15.1 chr17 1725748 1738585 - antisense NOVEL OTTHUMG00000177532.1 12838 459 2 ENSG00000167711.12 SERPINF2 chr17 1742836 1755268 + protein_coding KNOWN OTTHUMG00000090552.4 12433 2348 45 ENSG00000132386.9 SERPINF1 chr17 1761959 1777574 + protein_coding KNOWN OTTHUMG00000090571.5 15616 3069 50 ENSG00000186532.10 SMYD4 chr17 1779485 1830634 - protein_coding KNOWN OTTHUMG00000090570.6 51150 6777 37 ENSG00000132383.10 RPA1 chr17 1829702 1900082 + protein_coding KNOWN OTTHUMG00000090579.2 70381 5492 51 ENSG00000265504.1 AC130689.1 chr17 1829841 1829923 - miRNA NOVEL NA 83 83 1 ENSG00000224535.1 RP11-61J19.2 chr1 212466816 212467743 - lincRNA NOVEL OTTHUMG00000036746.1 928 359 2 ENSG00000108958.4 AC016292.3 chr17 1858039 1858446 - processed_pseudogene KNOWN OTTHUMG00000132195.1 408 408 1 ENSG00000185924.6 RTN4RL1 chr17 1934677 2025345 - protein_coding KNOWN OTTHUMG00000180184.2 90669 3625 2 ENSG00000262445.3 CTD-2545H1.2 chr17 1995614 2003671 + antisense NOVEL OTTHUMG00000177763.4 8058 870 3 ENSG00000228133.2 AC099684.1 chr17 2017716 2020706 + antisense NOVEL OTTHUMG00000132193.2 2991 2061 4 ENSG00000262869.1 CTD-2545H1.1 chr17 2019952 2023664 - sense_intronic NOVEL OTTHUMG00000177723.1 3713 560 2 ENSG00000108963.16 DPH1 chr17 2030110 2043430 + protein_coding KNOWN OTTHUMG00000177724.7 13321 5757 105 ENSG00000262664.2 OVCA2 chr17 2041936 2043430 + protein_coding KNOWN OTTHUMG00000132471.6 1495 1122 2 ENSG00000262533.1 RP11-667K14.4 chr17 2042900 2043425 - antisense NOVEL OTTHUMG00000177679.1 526 422 2 ENSG00000263050.1 RP11-667K14.3 chr17 2043475 2044968 - lincRNA NOVEL OTTHUMG00000177680.1 1494 443 2 ENSG00000267200.1 MIR132 chr17 2049908 2050008 - miRNA KNOWN NA 101 101 1 ENSG00000228067.1 RP11-61J19.3 chr1 212545694 212556065 + lincRNA NOVEL OTTHUMG00000036749.1 10372 332 3 ENSG00000267195.1 MIR212 chr17 2050271 2050380 - miRNA KNOWN NA 110 110 1 ENSG00000177374.11 HIC1 chr17 2054154 2063241 + protein_coding KNOWN OTTHUMG00000177635.8 9088 8108 15 ENSG00000070366.12 SMG6 chr17 2059839 2303771 - protein_coding KNOWN OTTHUMG00000177578.13 243933 10554 117 ENSG00000280333.1 RP11-667K14.14 chr17 2072823 2072956 + TEC KNOWN OTTHUMG00000178111.1 134 134 1 ENSG00000262810.1 RP11-667K14.5 chr17 2089681 2101560 + antisense NOVEL OTTHUMG00000177681.1 11880 528 2 ENSG00000279040.1 RP11-667K14.13 chr17 2101542 2101667 + TEC KNOWN OTTHUMG00000178113.1 126 126 1 ENSG00000279562.1 RP11-667K14.10 chr17 2117626 2117772 + TEC KNOWN OTTHUMG00000177683.1 147 147 1 ENSG00000279340.1 RP11-667K14.9 chr17 2122342 2122508 - TEC KNOWN OTTHUMG00000177684.1 167 167 1 ENSG00000262402.1 RP11-667K14.8 chr17 2127430 2127904 - processed_pseudogene KNOWN OTTHUMG00000177685.1 475 475 1 ENSG00000265777.2 RN7SL624P chr17 2199762 2200039 + misc_RNA KNOWN NA 278 278 1 ENSG00000260805.2 RP11-61J19.5 chr1 212557833 212559731 - lincRNA NOVEL OTTHUMG00000186548.2 1899 1899 1 ENSG00000236838.2 AC090617.1 chr17 2213697 2214414 + antisense NOVEL OTTHUMG00000132219.2 718 404 2 ENSG00000236457.1 AC130689.5 chr17 2215482 2216015 - sense_intronic NOVEL OTTHUMG00000132217.1 534 323 2 ENSG00000225084.1 AL450226.2 chr17 2232680 2233610 + antisense NOVEL OTTHUMG00000132218.1 931 710 2 ENSG00000278941.1 SMG6-IT1 chr17 2235713 2236086 - TEC KNOWN OTTHUMG00000177860.2 374 374 1 ENSG00000280242.1 RP5-1037N22.2 chr17 2255719 2256157 + TEC KNOWN OTTHUMG00000177687.1 439 439 1 ENSG00000167720.11 SRR chr17 2303383 2325260 + protein_coding KNOWN OTTHUMG00000090583.8 21878 3498 35 ENSG00000262333.1 HNRNPA1P16 chr17 2306761 2307715 + processed_pseudogene KNOWN OTTHUMG00000177701.1 955 955 1 ENSG00000167721.9 TSR1 chr17 2322503 2337507 - protein_coding KNOWN OTTHUMG00000177636.6 15005 5545 31 ENSG00000275084.2 SNORD91B chr17 2329016 2329237 - snoRNA KNOWN OTTHUMG00000185960.2 222 222 1 ENSG00000212552.3 SNORD91B chr17 2329119 2329213 - snoRNA KNOWN NA 95 95 1 ENSG00000162772.15 ATF3 chr1 212565334 212620777 + protein_coding KNOWN OTTHUMG00000036747.7 55444 4040 41 ENSG00000212163.4 SNORD91A chr17 2330180 2330370 - snoRNA KNOWN OTTHUMG00000185961.2 191 191 1 ENSG00000274802.1 SNORD91A chr17 2330276 2330370 - snoRNA KNOWN NA 95 95 1 ENSG00000141258.11 SGSM2 chr17 2337498 2381058 + protein_coding KNOWN OTTHUMG00000177637.10 43561 9771 108 ENSG00000274758.1 RP1-59D14.10 chr17 2366589 2366791 - antisense NOVEL OTTHUMG00000186618.1 203 203 1 ENSG00000263345.1 RP1-59D14.5 chr17 2375061 2379306 - antisense NOVEL OTTHUMG00000177761.3 4246 1234 6 ENSG00000070444.13 MNT chr17 2384060 2401118 - protein_coding KNOWN OTTHUMG00000090603.7 17059 8728 25 ENSG00000262456.1 RP1-59D14.1 chr17 2384847 2386664 + antisense NOVEL OTTHUMG00000177562.1 1818 1065 2 ENSG00000127804.11 METTL16 chr17 2405562 2511891 - protein_coding KNOWN OTTHUMG00000177564.10 106330 8934 57 ENSG00000279872.1 RP1-59D14.9 chr17 2424179 2424412 - TEC KNOWN OTTHUMG00000185963.1 234 234 1 ENSG00000280280.1 RP1-59D14.8 chr17 2460183 2460294 - TEC KNOWN OTTHUMG00000177862.2 112 112 1 ENSG00000235862.2 RP11-338C15.5 chr1 212624284 212626771 - antisense NOVEL OTTHUMG00000041085.1 2488 2225 2 ENSG00000243049.3 RN7SL33P chr17 2557753 2558094 - misc_RNA KNOWN NA 342 342 1 ENSG00000262953.1 EIF4A1P9 chr17 2586330 2587866 - processed_pseudogene KNOWN OTTHUMG00000177802.1 1537 1207 2 ENSG00000007168.11 PAFAH1B1 chr17 2593210 2685615 + protein_coding KNOWN OTTHUMG00000177574.6 92406 8127 63 ENSG00000262480.2 SAMD11P1 chr17 2613284 2613944 - processed_pseudogene KNOWN OTTHUMG00000177803.3 661 661 1 ENSG00000279432.1 RP11-135N5.3 chr17 2639297 2642418 + TEC KNOWN OTTHUMG00000185903.1 3122 3122 1 ENSG00000239884.3 RN7SL608P chr17 2680958 2681236 + misc_RNA KNOWN NA 279 279 1 ENSG00000272770.1 RP11-74E22.5 chr17 2683305 2685088 - antisense NOVEL OTTHUMG00000185904.1 1784 626 2 ENSG00000272911.1 RP11-74E22.6 chr17 2688473 2688960 + lincRNA NOVEL OTTHUMG00000185965.1 488 303 2 ENSG00000132361.15 CLUH chr17 2689386 2712663 - protein_coding KNOWN OTTHUMG00000177575.8 23278 6900 140 ENSG00000273606.1 MIR6776 chr17 2692861 2692919 - miRNA KNOWN NA 59 59 1 ENSG00000162771.7 FAM71A chr1 212624474 212626778 + protein_coding KNOWN OTTHUMG00000041084.1 2305 2305 1 ENSG00000262050.1 RP11-74E22.3 chr17 2712309 2712833 + antisense NOVEL OTTHUMG00000177804.1 525 443 2 ENSG00000277200.1 RP11-74E22.8 chr17 2720801 2723947 - lincRNA NOVEL OTTHUMG00000186619.1 3147 3147 1 ENSG00000261963.2 RP11-74E22.4 chr17 2724420 2749420 - unprocessed_pseudogene KNOWN OTTHUMG00000178197.2 25001 792 4 ENSG00000221200.1 MIR1253 chr17 2748078 2748182 - miRNA KNOWN NA 105 105 1 ENSG00000272920.1 MIR1253 chr17 2748078 2748182 + lincRNA KNOWN OTTHUMG00000185966.1 105 105 1 ENSG00000132359.12 RAP1GAP2 chr17 2777056 3037739 + protein_coding KNOWN OTTHUMG00000177642.7 260684 7350 113 ENSG00000262884.1 CTD-3060P21.1 chr17 2962248 2965895 - antisense NOVEL OTTHUMG00000177666.1 3648 2546 3 ENSG00000262628.1 OR1D5 chr17 3062669 3063607 - protein_coding KNOWN OTTHUMG00000177676.2 939 939 1 ENSG00000184166.1 OR1D2 chr17 3092058 3092996 - protein_coding KNOWN OTTHUMG00000090619.1 939 939 1 ENSG00000142163.7 OR1E3 chr17 3116423 3117366 + unprocessed_pseudogene KNOWN OTTHUMG00000177823.1 944 944 1 ENSG00000226036.1 RP11-338C15.2 chr1 212647296 212647755 + processed_pseudogene KNOWN OTTHUMG00000036785.1 460 460 1 ENSG00000183024.3 OR1G1 chr17 3126584 3127581 - protein_coding KNOWN OTTHUMG00000090618.2 998 998 1 ENSG00000261848.4 CTD-2309O5.3 chr17 3134969 3177031 - lincRNA NOVEL OTTHUMG00000177853.1 42063 792 7 ENSG00000262085.2 OR1P1 chr17 3153889 3154882 - unprocessed_pseudogene KNOWN OTTHUMG00000177731.2 994 994 1 ENSG00000172150.4 OR1A2 chr17 3197519 3198448 + protein_coding KNOWN OTTHUMG00000090638.1 930 930 1 ENSG00000172146.1 OR1A1 chr17 3215621 3216550 + protein_coding KNOWN OTTHUMG00000090637.1 930 930 1 ENSG00000255095.1 OR1D4 chr17 3240676 3241614 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000166844.1 939 939 2 ENSG00000262106.1 OR1D3P chr17 3265611 3266541 + unprocessed_pseudogene KNOWN OTTHUMG00000177805.1 931 931 1 ENSG00000221882.2 OR3A2 chr17 3277899 3278974 - protein_coding KNOWN OTTHUMG00000177667.1 1076 1076 1 ENSG00000262670.4 RP11-64J4.2 chr17 3278775 3386339 - sense_overlapping NOVEL OTTHUMG00000177668.1 107565 710 11 ENSG00000180090.4 OR3A1 chr17 3291635 3292600 - protein_coding KNOWN OTTHUMG00000090642.2 966 966 2 ENSG00000204501.5 PRAMEF9 chr1 13303509 13322598 + protein_coding KNOWN OTTHUMG00000008035.2 19090 1960 8 ENSG00000237980.1 RP11-338C15.3 chr1 212653999 212665434 - lincRNA NOVEL OTTHUMG00000036786.1 11436 473 3 ENSG00000279517.1 RP11-64J4.7 chr17 3309986 3311446 + TEC KNOWN OTTHUMG00000185989.1 1461 1461 1 ENSG00000180068.8 OR3A4P chr17 3310312 3311189 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000132940.7 878 878 1 ENSG00000272546.1 OR3A5P chr17 3311193 3311892 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000185967.2 700 700 1 ENSG00000267129.1 OR1AC1P chr17 3377527 3377602 - unprocessed_pseudogene KNOWN OTTHUMG00000179846.1 76 76 1 ENSG00000180042.4 OR1R1P chr17 3385930 3386833 + unprocessed_pseudogene KNOWN OTTHUMG00000177732.2 904 904 1 ENSG00000180016.2 OR1E1 chr17 3397104 3398410 - protein_coding KNOWN OTTHUMG00000090643.1 1307 1307 1 ENSG00000159961.1 OR3A3 chr17 3420568 3421533 + protein_coding KNOWN OTTHUMG00000090649.1 966 966 1 ENSG00000127780.3 OR1E2 chr17 3432870 3433841 - protein_coding KNOWN OTTHUMG00000090651.1 972 972 1 ENSG00000280268.1 RP11-147K16.3 chr17 3439923 3441844 - TEC KNOWN OTTHUMG00000177647.1 1922 1922 1 ENSG00000141255.11 SPATA22 chr17 3440019 3513852 - protein_coding KNOWN OTTHUMG00000177609.2 73834 2860 95 ENSG00000123685.7 BATF3 chr1 212686418 212699985 - protein_coding KNOWN OTTHUMG00000036807.2 13568 2713 7 ENSG00000108381.9 ASPA chr17 3472374 3503419 + protein_coding KNOWN OTTHUMG00000090655.2 31046 5854 20 ENSG00000167723.13 TRPV3 chr17 3510502 3557995 - protein_coding KNOWN OTTHUMG00000090695.2 47494 9780 137 ENSG00000262304.1 TRPV1 chr17 3565444 3636249 - protein_coding NOVEL OTTHUMG00000177650.2 70806 7400 31 ENSG00000196689.9 TRPV1 chr17 3565444 3597098 - protein_coding KNOWN OTTHUMG00000177649.1 31655 4995 109 ENSG00000263338.1 RP11-235E17.3 chr17 3577955 3578853 - sense_intronic NOVEL OTTHUMG00000177651.1 899 560 2 ENSG00000261916.1 RP11-235E17.4 chr17 3601761 3602272 - sense_intronic NOVEL OTTHUMG00000177652.1 512 512 1 ENSG00000197417.7 SHPK chr17 3608262 3636322 - protein_coding KNOWN OTTHUMG00000090694.3 28061 3838 7 ENSG00000262248.1 RP11-235E17.5 chr17 3619256 3619913 - processed_pseudogene KNOWN OTTHUMG00000177656.1 658 344 2 ENSG00000040531.13 CTNS chr17 3636468 3661542 + protein_coding KNOWN OTTHUMG00000090693.6 25075 3398 66 ENSG00000262903.1 RP11-235E17.6 chr17 3655621 3658092 - antisense NOVEL OTTHUMG00000177717.1 2472 874 3 ENSG00000207491.1 RNU6-423P chr1 212692264 212692367 + snRNA KNOWN NA 104 104 1 ENSG00000213977.6 TAX1BP3 chr17 3662896 3668682 - protein_coding KNOWN OTTHUMG00000090701.2 5787 1383 7 ENSG00000257950.3 P2RX5-TAX1BP3 chr17 3663063 3696194 - protein_coding NOVEL OTTHUMG00000169623.2 33132 5905 15 ENSG00000240898.1 RP11-48B14.1 chr17 3665220 3665702 + processed_pseudogene KNOWN OTTHUMG00000157655.1 483 483 1 ENSG00000127774.6 EMC6 chr17 3668815 3669668 + protein_coding KNOWN OTTHUMG00000180187.1 854 769 4 ENSG00000083454.20 P2RX5 chr17 3672199 3696404 - protein_coding KNOWN OTTHUMG00000090700.4 24206 4190 95 ENSG00000083457.10 ITGAE chr17 3714628 3801243 - protein_coding KNOWN OTTHUMG00000177634.2 86616 6657 69 ENSG00000262692.1 CTD-3195I5.3 chr17 3721628 3722488 + antisense NOVEL OTTHUMG00000177669.1 861 291 2 ENSG00000177602.5 GSG2 chr17 3723903 3726699 + protein_coding KNOWN OTTHUMG00000090703.1 2797 2797 1 ENSG00000262358.1 CTD-3195I5.4 chr17 3729361 3730493 + antisense NOVEL OTTHUMG00000177670.1 1133 398 2 ENSG00000074356.15 C17orf85 chr17 3802165 3846251 - protein_coding KNOWN OTTHUMG00000177672.3 44087 14718 43 ENSG00000117697.13 NSL1 chr1 212726153 212791782 - protein_coding KNOWN OTTHUMG00000036806.4 65630 4091 30 ENSG00000004660.13 CAMKK1 chr17 3860315 3894891 - protein_coding KNOWN OTTHUMG00000090725.2 34577 7424 56 ENSG00000108405.3 P2RX1 chr17 3896592 3916500 - protein_coding KNOWN OTTHUMG00000177673.1 19909 3970 28 ENSG00000074370.16 ATP2A3 chr17 3923870 3964464 - protein_coding KNOWN OTTHUMG00000177674.1 40595 6893 166 ENSG00000263312.1 RP11-459C13.1 chr17 3977103 3981899 + lincRNA NOVEL OTTHUMG00000177725.1 4797 549 2 ENSG00000074755.13 ZZEF1 chr17 4004445 4143020 - protein_coding KNOWN OTTHUMG00000090741.2 138576 15878 146 ENSG00000252456.1 RNA5SP434 chr17 4056756 4056876 - rRNA KNOWN NA 121 121 1 ENSG00000167740.8 CYB5D2 chr17 4143168 4187310 + protein_coding KNOWN OTTHUMG00000177726.3 44143 2182 20 ENSG00000185722.15 ANKFY1 chr17 4163907 4263977 - protein_coding KNOWN OTTHUMG00000177727.4 100071 14120 130 ENSG00000263165.1 RP11-810M2.2 chr17 4163910 4164713 + antisense NOVEL OTTHUMG00000177728.1 804 512 2 ENSG00000251812.1 Y_RNA chr17 4186326 4186424 + misc_RNA NOVEL NA 99 99 1 ENSG00000203705.9 TATDN3 chr1 212791828 212816626 + protein_coding KNOWN OTTHUMG00000036805.10 24799 3788 117 ENSG00000263219.1 RYKP1 chr17 4222091 4223828 + processed_pseudogene KNOWN OTTHUMG00000177729.1 1738 1738 1 ENSG00000274363.1 RP11-104O19.4 chr17 4267691 4268430 + lincRNA NOVEL OTTHUMG00000186620.1 740 740 1 ENSG00000132388.11 UBE2G1 chr17 4269259 4366628 - protein_coding KNOWN OTTHUMG00000177826.2 97370 4539 32 ENSG00000261868.1 MFSD1P1 chr17 4301372 4302698 + processed_pseudogene KNOWN OTTHUMG00000177730.1 1327 1327 1 ENSG00000263882.2 RN7SL774P chr17 4364164 4364453 - misc_RNA KNOWN NA 290 290 1 ENSG00000182557.6 SPNS3 chr17 4433688 4488208 + protein_coding KNOWN OTTHUMG00000177737.2 54521 2684 39 ENSG00000262823.1 RP13-580F15.2 chr17 4481966 4486353 - antisense NOVEL OTTHUMG00000177738.1 4388 1059 6 ENSG00000229782.1 AC118754.4 chr17 4497394 4499674 - antisense NOVEL OTTHUMG00000132937.1 2281 370 2 ENSG00000183018.7 SPNS2 chr17 4498838 4539035 + protein_coding KNOWN OTTHUMG00000177739.3 40198 4111 39 ENSG00000132382.13 MYBBP1A chr17 4538897 4555631 - protein_coding KNOWN OTTHUMG00000090747.2 16735 6203 127 ENSG00000236905.2 RP11-348H3.2 chr1 212824027 212824505 + processed_pseudogene KNOWN OTTHUMG00000036919.2 479 479 1 ENSG00000167741.9 GGT6 chr17 4556927 4560818 - protein_coding KNOWN OTTHUMG00000177827.1 3892 3161 20 ENSG00000262921.1 RP11-141J13.3 chr17 4565752 4571760 + lincRNA NOVEL OTTHUMG00000177828.1 6009 537 2 ENSG00000262519.1 TXNP4 chr17 4572206 4572515 + processed_pseudogene KNOWN OTTHUMG00000177829.2 310 310 1 ENSG00000188176.10 SMTNL2 chr17 4583999 4608319 + protein_coding KNOWN OTTHUMG00000132938.2 24321 2470 21 ENSG00000261863.1 RP11-141J13.5 chr17 4610449 4617650 + lincRNA NOVEL OTTHUMG00000177830.1 7202 1273 2 ENSG00000222429.1 RNU6-955P chr17 4619749 4619852 - snRNA KNOWN NA 104 104 1 ENSG00000161905.11 ALOX15 chr17 4630902 4642294 - protein_coding KNOWN OTTHUMG00000090746.2 11393 3404 55 ENSG00000141456.13 PELP1 chr17 4669774 4704337 - protein_coding KNOWN OTTHUMG00000177831.7 34564 6577 141 ENSG00000235085.3 AC091153.4 chr17 4673830 4696831 + antisense NOVEL OTTHUMG00000132939.3 23002 428 5 ENSG00000244184.1 RP11-314A20.2 chr17 4704230 4705529 + antisense NOVEL OTTHUMG00000157665.1 1300 472 2 ENSG00000185523.6 SPATA45 chr1 212830141 212847649 - protein_coding KNOWN OTTHUMG00000036920.2 17509 506 3 ENSG00000213939.4 RP11-314A20.1 chr17 4704816 4705217 - processed_pseudogene KNOWN OTTHUMG00000157657.1 402 402 1 ENSG00000141480.16 ARRB2 chr17 4710489 4721499 + protein_coding KNOWN OTTHUMG00000090759.4 11011 4372 180 ENSG00000161920.8 MED11 chr17 4731428 4733610 + protein_coding KNOWN OTTHUMG00000177896.1 2183 1477 8 ENSG00000261898.2 RP11-314A20.5 chr17 4731756 4732371 - antisense NOVEL OTTHUMG00000177897.2 616 480 2 ENSG00000161921.13 CXCL16 chr17 4733526 4739922 - protein_coding KNOWN OTTHUMG00000090761.2 6397 2794 21 ENSG00000141497.12 ZMYND15 chr17 4740015 4746119 + protein_coding KNOWN OTTHUMG00000090760.3 6105 3303 66 ENSG00000142484.6 TM4SF5 chr17 4771884 4783213 + protein_coding KNOWN OTTHUMG00000090776.3 11330 932 9 ENSG00000182853.10 VMO1 chr17 4785285 4786433 - protein_coding KNOWN OTTHUMG00000177898.1 1149 803 11 ENSG00000280254.1 RP11-81A22.4 chr17 4787057 4789162 + TEC KNOWN OTTHUMG00000177930.1 2106 2106 1 ENSG00000182327.7 GLTPD2 chr17 4788959 4790390 + protein_coding KNOWN OTTHUMG00000177929.1 1432 1023 4 ENSG00000198468.6 FLVCR1-AS1 chr1 212852108 212858088 - lincRNA KNOWN OTTHUMG00000036923.2 5981 3094 6 ENSG00000142507.8 PSMB6 chr17 4796144 4798503 + protein_coding KNOWN OTTHUMG00000090777.3 2360 1448 22 ENSG00000262165.1 RP11-81A22.5 chr17 4801159 4807013 - lincRNA NOVEL OTTHUMG00000177931.1 5855 562 2 ENSG00000129219.12 PLD2 chr17 4807096 4823434 + protein_coding KNOWN OTTHUMG00000090779.5 16339 4888 116 ENSG00000141503.14 MINK1 chr17 4833388 4898061 + protein_coding KNOWN OTTHUMG00000177932.1 64674 7817 213 ENSG00000230201.5 ATP6V0CP1 chr17 4856757 4857374 - processed_pseudogene KNOWN OTTHUMG00000132925.1 618 618 1 ENSG00000264113.2 RN7SL784P chr17 4882975 4883316 + misc_RNA KNOWN NA 342 342 1 ENSG00000108556.7 CHRNE chr17 4897774 4903074 - protein_coding KNOWN OTTHUMG00000090778.4 5301 2641 25 ENSG00000205710.3 C17orf107 chr17 4899418 4902932 + protein_coding KNOWN OTTHUMG00000164838.1 3515 3408 5 ENSG00000185245.7 GP1BA chr17 4932297 4935030 + protein_coding KNOWN OTTHUMG00000177946.1 2734 2501 5 ENSG00000108528.12 SLC25A11 chr17 4937130 4940251 - protein_coding KNOWN OTTHUMG00000099395.5 3122 2669 31 ENSG00000235182.1 RP11-348H3.4 chr1 212853280 212853426 + processed_pseudogene KNOWN OTTHUMG00000036921.1 147 147 1 ENSG00000108523.14 RNF167 chr17 4940008 4945222 + protein_coding KNOWN OTTHUMG00000099397.4 5215 2744 95 ENSG00000108518.7 PFN1 chr17 4945652 4949061 - protein_coding KNOWN OTTHUMG00000099396.3 3410 1987 8 ENSG00000108515.16 ENO3 chr17 4948092 4957131 + protein_coding KNOWN OTTHUMG00000099394.5 9040 4292 105 ENSG00000091640.6 SPAG7 chr17 4959226 4967872 - protein_coding KNOWN OTTHUMG00000177733.1 8647 2831 35 ENSG00000108509.19 CAMTA2 chr17 4967992 4987652 - protein_coding KNOWN OTTHUMG00000099417.4 19661 5999 175 ENSG00000262429.1 RP5-1050D4.3 chr17 4967995 4968822 + antisense NOVEL OTTHUMG00000177764.1 828 474 2 ENSG00000274300.1 MIR6864 chr17 4969702 4969771 - miRNA KNOWN NA 70 70 1 ENSG00000278517.1 MIR6865 chr17 4970086 4970150 - miRNA KNOWN NA 65 65 1 ENSG00000234203.1 RP5-1050D4.2 chr17 4972851 4974681 + antisense NOVEL OTTHUMG00000177734.1 1831 439 2 ENSG00000262678.1 RP5-1050D4.4 chr17 4986466 4987324 + antisense NOVEL OTTHUMG00000177765.1 859 542 2 ENSG00000236317.1 RP11-348H3.5 chr1 212855175 212855366 - processed_pseudogene KNOWN OTTHUMG00000036922.1 192 192 1 ENSG00000262227.1 RP5-1050D4.5 chr17 4987706 4988446 + antisense NOVEL OTTHUMG00000177767.1 741 551 2 ENSG00000196388.7 INCA1 chr17 4988130 4997610 - protein_coding KNOWN OTTHUMG00000177768.1 9481 1553 31 ENSG00000129250.10 KIF1C chr17 4997948 5028401 + protein_coding KNOWN OTTHUMG00000099451.2 30454 8580 38 ENSG00000227495.1 AC109333.10 chr17 5019214 5020093 - antisense NOVEL OTTHUMG00000132924.2 880 583 2 ENSG00000132517.13 SLC52A1 chr17 5032600 5052009 - protein_coding KNOWN OTTHUMG00000099448.2 19410 3934 22 ENSG00000262495.1 RP11-46I8.1 chr17 5060356 5062123 + processed_pseudogene KNOWN OTTHUMG00000177797.1 1768 416 4 ENSG00000262693.1 RP11-46I8.3 chr17 5075678 5078113 - antisense NOVEL OTTHUMG00000177798.1 2436 490 2 ENSG00000180787.5 ZFP3 chr17 5078248 5096374 + protein_coding KNOWN OTTHUMG00000177799.1 18127 5206 2 ENSG00000167840.12 ZNF232 chr17 5105541 5123116 - protein_coding KNOWN OTTHUMG00000099450.2 17576 2794 34 ENSG00000234327.6 AC012146.7 chr17 5111468 5115004 + processed_transcript NOVEL OTTHUMG00000132913.2 3537 2006 9 ENSG00000237700.1 RP11-219C24.6 chr1 13305955 13308887 + unitary_pseudogene KNOWN OTTHUMG00000008036.2 2933 1425 3 ENSG00000162769.11 FLVCR1 chr1 212858255 212899363 + protein_coding KNOWN OTTHUMG00000036924.3 41109 6442 32 ENSG00000129204.15 USP6 chr17 5116438 5175034 + protein_coding KNOWN OTTHUMG00000099449.2 58597 11270 140 ENSG00000262855.1 RP11-46I8.4 chr17 5126740 5127010 - processed_pseudogene KNOWN OTTHUMG00000177800.1 271 271 1 ENSG00000180626.9 ZNF594 chr17 5179536 5191883 - protein_coding KNOWN OTTHUMG00000132059.2 12348 5314 5 ENSG00000261879.4 RP11-333E1.1 chr17 5192084 5248069 + antisense NOVEL OTTHUMG00000177801.2 55986 2190 13 ENSG00000161929.13 SCIMP chr17 5208961 5234860 - protein_coding KNOWN OTTHUMG00000132914.2 25900 4208 20 ENSG00000263164.1 RP11-333E1.2 chr17 5240508 5241543 - lincRNA NOVEL OTTHUMG00000177869.1 1036 498 3 ENSG00000029725.15 RABEP1 chr17 5282265 5385812 + protein_coding KNOWN OTTHUMG00000177870.4 103548 6531 62 ENSG00000108559.10 NUP88 chr17 5360963 5420160 - protein_coding KNOWN OTTHUMG00000099453.3 59198 5294 85 ENSG00000263220.1 RP11-420A6.2 chr17 5364315 5371626 - antisense NOVEL OTTHUMG00000177871.1 7312 512 2 ENSG00000129197.13 RPAIN chr17 5419641 5432876 + protein_coding KNOWN OTTHUMG00000177872.2 13236 7430 85 ENSG00000143494.14 VASH2 chr1 212950520 212992037 + protein_coding KNOWN OTTHUMG00000036925.3 41518 9086 61 ENSG00000263272.1 CTC-524C5.2 chr17 5425139 5432876 - antisense NOVEL OTTHUMG00000177873.1 7738 1938 2 ENSG00000108561.7 C1QBP chr17 5432777 5448830 - protein_coding KNOWN OTTHUMG00000177875.1 16054 2335 28 ENSG00000005100.11 DHX33 chr17 5440912 5469060 - protein_coding KNOWN OTTHUMG00000102041.2 28149 5872 51 ENSG00000262099.1 CTC-524C5.5 chr17 5469092 5470360 + lincRNA NOVEL OTTHUMG00000177876.1 1269 398 3 ENSG00000072849.9 DERL2 chr17 5471251 5486811 - protein_coding KNOWN OTTHUMG00000102040.3 15561 6386 64 ENSG00000167842.14 MIS12 chr17 5486285 5490814 + protein_coding KNOWN OTTHUMG00000102042.2 4530 3157 16 ENSG00000091592.14 NLRP1 chr17 5499427 5619424 - protein_coding KNOWN OTTHUMG00000132419.4 119998 12808 208 ENSG00000280489.1 U7 chr17 5514209 5514270 - snRNA NOVEL NA 62 62 1 ENSG00000262961.1 CTB-162E12.1 chr17 5730289 5731085 + processed_pseudogene KNOWN OTTHUMG00000177819.3 797 797 1 ENSG00000179314.12 WSCD1 chr17 5772234 6124427 + protein_coding KNOWN OTTHUMG00000177794.4 352194 9082 74 ENSG00000174606.11 ANGEL2 chr1 212992182 213015826 - protein_coding KNOWN OTTHUMG00000036927.3 23645 7279 45 ENSG00000262231.1 RP11-960B9.2 chr17 6189361 6190541 - processed_transcript NOVEL OTTHUMG00000177818.1 1181 591 4 ENSG00000206618.1 RNU6-1264P chr17 6207163 6207269 + snRNA KNOWN NA 107 107 1 ENSG00000276283.1 AC005668.1 chr17 6296644 6296746 - miRNA NOVEL NA 103 103 1 ENSG00000262609.1 BTF3P14 chr17 6322413 6323228 - processed_pseudogene KNOWN OTTHUMG00000177820.1 816 476 2 ENSG00000129221.13 AIPL1 chr17 6393693 6435199 - protein_coding KNOWN OTTHUMG00000102043.5 41507 3985 64 ENSG00000262818.1 RP11-636N17.1 chr17 6417685 6418264 + processed_pseudogene KNOWN OTTHUMG00000177821.1 580 278 2 ENSG00000129195.14 FAM64A chr17 6444415 6451469 + protein_coding KNOWN OTTHUMG00000177832.5 7055 2823 46 ENSG00000091622.14 PITPNM3 chr17 6451264 6556494 - protein_coding KNOWN OTTHUMG00000102039.3 105231 10609 67 ENSG00000274860.1 Metazoa_SRP chr17 6521131 6521412 + misc_RNA NOVEL NA 282 282 1 ENSG00000198920.8 KIAA0753 chr17 6578148 6640927 - protein_coding KNOWN OTTHUMG00000177928.4 62780 6299 93 ENSG00000136643.10 RPS6KC1 chr1 213051233 213274773 + protein_coding KNOWN OTTHUMG00000036926.3 223541 6190 105 ENSG00000200914.1 RNA5SP435 chr17 6600944 6601051 - rRNA KNOWN NA 108 108 1 ENSG00000129235.9 TXNDC17 chr17 6640758 6644541 + protein_coding KNOWN OTTHUMG00000102053.2 3784 3784 34 ENSG00000108590.9 MED31 chr17 6643315 6651634 - protein_coding KNOWN OTTHUMG00000102051.2 8320 2103 13 ENSG00000256806.3 C17orf100 chr17 6651718 6653473 + lincRNA KNOWN OTTHUMG00000188340.1 1756 1756 3 ENSG00000279257.1 C17orf100 chr17 6651914 6652270 + protein_coding KNOWN NA 357 357 1 ENSG00000261996.1 CTC-281F24.1 chr17 6653464 6655009 - lincRNA NOVEL OTTHUMG00000177865.1 1546 879 2 ENSG00000264468.1 MIR4520-1 chr17 6655440 6655509 - miRNA KNOWN NA 70 70 1 ENSG00000274114.1 CTC-281F24.3 chr17 6657214 6661413 + unprocessed_pseudogene KNOWN OTTHUMG00000187904.1 4200 984 7 ENSG00000141485.14 SLC13A5 chr17 6684713 6713567 - protein_coding KNOWN OTTHUMG00000102052.3 28855 8982 78 ENSG00000262990.1 CTC-281F24.2 chr17 6749685 6749978 - processed_pseudogene KNOWN OTTHUMG00000177868.1 294 294 1 ENSG00000228646.3 RPL31P13 chr1 213428708 213429077 - processed_pseudogene KNOWN OTTHUMG00000037067.1 370 370 1 ENSG00000244283.1 RPL23AP73 chr17 6749718 6750188 + processed_pseudogene KNOWN OTTHUMG00000157675.1 471 471 1 ENSG00000132530.15 XAF1 chr17 6755447 6775647 + protein_coding KNOWN OTTHUMG00000177908.8 20201 6615 86 ENSG00000279296.1 RP11-609D21.3 chr17 6772831 6776116 - TEC KNOWN OTTHUMG00000177909.1 3286 3286 1 ENSG00000177294.6 FBXO39 chr17 6776223 6797101 + protein_coding KNOWN OTTHUMG00000102062.2 20879 2918 11 ENSG00000167858.11 TEKT1 chr17 6789133 6831761 - protein_coding KNOWN OTTHUMG00000102063.4 42629 3847 24 ENSG00000262943.6 ALOX12P2 chr17 6853861 6954107 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000177324.4 100247 5655 74 ENSG00000215067.8 ALOX12-AS1 chr17 6876635 7012349 - antisense NOVEL OTTHUMG00000132903.8 135715 3217 32 ENSG00000262503.1 RP11-530N7.2 chr17 6927472 6928191 - processed_pseudogene KNOWN OTTHUMG00000177877.1 720 720 1 ENSG00000263316.1 RP11-530N7.3 chr17 6954098 6978960 - antisense NOVEL OTTHUMG00000177889.1 24863 539 5 ENSG00000267047.1 RP11-589P10.7 chr17 6985494 7019414 - antisense NOVEL OTTHUMG00000180218.1 33921 498 4 ENSG00000225233.1 RP11-554K11.2 chr1 213492301 213546447 + lincRNA NOVEL OTTHUMG00000041155.1 54147 440 2 ENSG00000262089.1 RP11-589P10.5 chr17 6994642 6995189 - lincRNA NOVEL OTTHUMG00000177906.1 548 343 2 ENSG00000108839.10 ALOX12 chr17 6996065 7010736 + protein_coding KNOWN OTTHUMG00000102088.4 14672 2616 22 ENSG00000219200.9 RNASEK chr17 7012417 7014532 + protein_coding KNOWN OTTHUMG00000170145.4 2116 1789 33 ENSG00000161939.17 RNASEK-C17orf49 chr17 7012635 7017520 + protein_coding KNOWN OTTHUMG00000170146.5 4886 1947 25 ENSG00000258315.4 C17orf49 chr17 7014495 7017525 + protein_coding KNOWN OTTHUMG00000170147.2 3031 2628 41 ENSG00000267532.3 MIR497HG chr17 7015818 7019659 - antisense KNOWN OTTHUMG00000180219.1 3842 3842 4 ENSG00000275739.1 MIR195 chr17 7017615 7017701 - miRNA KNOWN NA 87 87 1 ENSG00000273895.1 MIR497 chr17 7017911 7018022 - miRNA KNOWN NA 112 112 1 ENSG00000161940.9 BCL6B chr17 7023020 7030290 + protein_coding KNOWN OTTHUMG00000177882.3 7271 4373 24 ENSG00000174327.6 SLC16A13 chr17 7036075 7040121 + protein_coding KNOWN OTTHUMG00000102089.2 4047 2087 5 ENSG00000221026.1 AL592063.1 chr1 213609696 213609840 - miRNA NOVEL NA 145 145 1 ENSG00000174326.10 SLC16A11 chr17 7041630 7043923 - protein_coding KNOWN OTTHUMG00000102087.2 2294 2041 14 ENSG00000262067.1 CTD-2545G14.2 chr17 7058934 7059204 + processed_pseudogene KNOWN OTTHUMG00000177938.1 271 271 1 ENSG00000132514.12 CLEC10A chr17 7074537 7080307 - protein_coding KNOWN OTTHUMG00000177939.4 5771 2469 40 ENSG00000161944.15 ASGR2 chr17 7101322 7115700 - protein_coding KNOWN OTTHUMG00000102158.3 14379 2490 44 ENSG00000213876.4 RPL7AP64 chr17 7140930 7141592 + processed_pseudogene KNOWN OTTHUMG00000157687.1 663 663 1 ENSG00000141505.10 ASGR1 chr17 7173431 7179564 - protein_coding KNOWN OTTHUMG00000102159.5 6134 3748 54 ENSG00000132535.17 DLG4 chr17 7189890 7219702 - protein_coding KNOWN OTTHUMG00000134327.4 29813 5746 101 ENSG00000279812.1 CTD-2545G14.4 chr17 7192295 7192448 - TEC KNOWN OTTHUMG00000177965.1 154 154 1 ENSG00000072778.18 ACADVL chr17 7217125 7225273 + protein_coding KNOWN OTTHUMG00000102157.23 8149 4865 256 ENSG00000199053.2 MIR324 chr17 7223273 7223384 - miRNA KNOWN NA 112 112 1 ENSG00000228255.1 RP11-323I1.1 chr1 213731416 213794587 + lincRNA NOVEL OTTHUMG00000041157.1 63172 347 2 ENSG00000004975.10 DVL2 chr17 7225341 7234545 - protein_coding KNOWN OTTHUMG00000102155.3 9205 5350 93 ENSG00000040633.11 PHF23 chr17 7235028 7239722 - protein_coding KNOWN OTTHUMG00000177972.3 4695 2783 56 ENSG00000170296.8 GABARAP chr17 7240014 7242770 - protein_coding KNOWN OTTHUMG00000102156.2 2757 2266 21 ENSG00000262526.2 CTD-2545G14.7 chr17 7240427 7244635 - protein_coding NOVEL OTTHUMG00000178096.2 4209 776 4 ENSG00000279641.1 CTD-2545G14.6 chr17 7242200 7243814 + TEC KNOWN OTTHUMG00000178009.2 1615 1615 1 ENSG00000175826.10 CTDNEP1 chr17 7243591 7252491 - protein_coding KNOWN OTTHUMG00000102180.5 8901 2584 81 ENSG00000262302.1 RP1-4G17.5 chr17 7246829 7262089 - protein_coding NOVEL OTTHUMG00000178008.1 15261 489 4 ENSG00000170291.13 ELP5 chr17 7251416 7259940 + protein_coding KNOWN OTTHUMG00000177974.6 8525 2768 90 ENSG00000281419.1 AC003688.1 chr17 7251969 7252099 - miRNA NOVEL NA 131 131 1 ENSG00000181885.17 CLDN7 chr17 7259903 7263983 - protein_coding KNOWN OTTHUMG00000178005.3 4081 2492 28 ENSG00000230461.7 PROX1-AS1 chr1 213817751 213988508 - processed_transcript NOVEL OTTHUMG00000036947.8 170758 10290 246 ENSG00000202251.1 Y_RNA chr17 7266055 7266166 - misc_RNA NOVEL NA 112 112 1 ENSG00000181856.13 SLC2A4 chr17 7281667 7288257 + protein_coding KNOWN OTTHUMG00000102181.5 6591 4046 52 ENSG00000263342.1 RP1-4G17.2 chr17 7282947 7284071 - antisense NOVEL OTTHUMG00000177991.1 1125 415 2 ENSG00000006047.11 YBX2 chr17 7288252 7294615 - protein_coding KNOWN OTTHUMG00000177992.2 6364 4618 39 ENSG00000132507.16 EIF5A chr17 7306999 7312463 + protein_coding KNOWN OTTHUMG00000102197.6 5465 2815 58 ENSG00000132522.14 GPS2 chr17 7311324 7315564 - protein_coding KNOWN OTTHUMG00000102198.8 4241 3089 106 ENSG00000261915.5 RP11-542C16.2 chr17 7312661 7319174 - protein_coding NOVEL OTTHUMG00000178134.2 6514 2571 38 ENSG00000215041.8 NEURL4 chr17 7315628 7329393 - protein_coding KNOWN OTTHUMG00000132319.5 13766 6170 190 ENSG00000224647.2 AC026954.6 chr17 7330452 7335413 + unitary_pseudogene KNOWN OTTHUMG00000132361.2 4962 1293 7 ENSG00000072818.10 ACAP1 chr17 7336529 7351478 + protein_coding KNOWN OTTHUMG00000102199.8 14950 7421 66 ENSG00000281664.1 LINC00538 chr1 213924749 213926654 - lincRNA KNOWN OTTHUMG00000189733.1 1906 1906 1 ENSG00000213859.4 KCTD11 chr17 7351889 7354944 + protein_coding KNOWN OTTHUMG00000132061.2 3056 3056 2 ENSG00000263171.1 RP11-542C16.1 chr17 7352687 7354944 - antisense NOVEL OTTHUMG00000178133.1 2258 421 2 ENSG00000182896.11 TMEM95 chr17 7355123 7357219 + protein_coding KNOWN OTTHUMG00000132899.4 2097 1224 21 ENSG00000281080.1 Metazoa_SRP chr17 7378793 7379060 - misc_RNA NOVEL NA 268 268 1 ENSG00000174292.11 TNK1 chr17 7380534 7389774 + protein_coding KNOWN OTTHUMG00000178174.4 9241 3860 45 ENSG00000187838.15 TMEM256-PLSCR3 chr17 7389727 7394843 - protein_coding KNOWN OTTHUMG00000178169.3 5117 2834 91 ENSG00000262481.4 C17orf61-PLSCR3 chr17 7389734 7404097 - protein_coding KNOWN OTTHUMG00000178150.4 14364 2557 33 ENSG00000205544.3 TMEM256 chr17 7402975 7404137 - protein_coding KNOWN OTTHUMG00000132900.3 1163 707 9 ENSG00000169992.8 NLGN2 chr17 7404874 7419860 + protein_coding KNOWN OTTHUMG00000108138.2 14987 5550 21 ENSG00000262880.1 RP11-104H15.7 chr17 7420103 7444081 + processed_transcript NOVEL OTTHUMG00000178212.1 23979 1975 6 ENSG00000228229.2 RP11-219C24.10 chr1 13324039 13324518 + lincRNA NOVEL OTTHUMG00000008038.2 480 384 2 ENSG00000117707.14 PROX1 chr1 213983181 214041502 + protein_coding KNOWN OTTHUMG00000036946.7 58322 8928 26 ENSG00000181323.7 SPEM1 chr17 7420360 7421632 + protein_coding KNOWN OTTHUMG00000178189.1 1273 982 3 ENSG00000184560.6 C17orf74 chr17 7425615 7427568 + protein_coding KNOWN OTTHUMG00000178190.2 1954 1651 6 ENSG00000181284.2 TMEM102 chr17 7435443 7437679 + protein_coding KNOWN OTTHUMG00000132901.1 2237 2129 5 ENSG00000262624.1 RP11-104H15.9 chr17 7436557 7437523 - antisense NOVEL OTTHUMG00000178213.1 967 327 2 ENSG00000161958.9 FGF11 chr17 7438273 7444937 + protein_coding KNOWN OTTHUMG00000108136.4 6665 5565 27 ENSG00000263301.1 RP11-104H15.8 chr17 7439159 7443327 - antisense NOVEL OTTHUMG00000178214.1 4169 330 2 ENSG00000272884.1 RP11-104H15.10 chr17 7439506 7445966 + processed_transcript NOVEL OTTHUMG00000186449.1 6461 5553 3 ENSG00000170175.9 CHRNB1 chr17 7445061 7457707 + protein_coding KNOWN OTTHUMG00000108139.3 12647 4329 55 ENSG00000174282.10 ZBTB4 chr17 7459366 7484263 - protein_coding KNOWN OTTHUMG00000108137.2 24898 6026 8 ENSG00000259224.2 SLC35G6 chr17 7481332 7483496 + protein_coding KNOWN OTTHUMG00000187017.1 2165 1697 2 ENSG00000274895.1 RP11-478J18.2 chr1 213983793 213986419 - antisense NOVEL OTTHUMG00000187610.1 2627 2627 1 ENSG00000181222.13 POLR2A chr17 7484366 7514618 + protein_coding KNOWN OTTHUMG00000177594.3 30253 8357 87 ENSG00000201489.1 Y_RNA chr17 7537096 7537196 - misc_RNA NOVEL NA 101 101 1 ENSG00000239697.9 TNFSF12 chr17 7548891 7557890 + protein_coding KNOWN OTTHUMG00000108148.6 9000 1879 27 ENSG00000248871.1 TNFSF12-TNFSF13 chr17 7549099 7561601 + protein_coding KNOWN OTTHUMG00000161573.1 12503 1816 11 ENSG00000276384.1 RP11-186B7.7 chr17 7557820 7558245 - antisense NOVEL OTTHUMG00000186623.1 426 426 1 ENSG00000161955.15 TNFSF13 chr17 7558292 7561608 + protein_coding KNOWN OTTHUMG00000108145.4 3317 2276 50 ENSG00000161956.11 SENP3 chr17 7561875 7571969 + protein_coding KNOWN OTTHUMG00000178333.5 10095 3668 56 ENSG00000277957.1 SENP3-EIF4A1 chr17 7563287 7578715 + protein_coding KNOWN OTTHUMG00000178334.3 15429 3519 21 ENSG00000161960.13 EIF4A1 chr17 7572706 7579005 + protein_coding KNOWN OTTHUMG00000108149.14 6300 5316 193 ENSG00000264772.4 RP11-186B7.4 chr17 7572706 7582024 + processed_transcript NOVEL OTTHUMG00000178274.1 9319 4822 24 ENSG00000272167.2 PROX1-AS1 chr1 214028891 214030901 - antisense KNOWN OTTHUMG00000172502.2 2011 2011 1 ENSG00000209582.1 SNORA48 chr17 7574713 7574847 + snoRNA KNOWN NA 135 135 1 ENSG00000238917.1 SNORD10 chr17 7576811 7576952 + snoRNA KNOWN NA 142 142 1 ENSG00000277985.1 SNORA67 chr17 7577955 7578091 + snoRNA KNOWN NA 137 137 1 ENSG00000129226.12 CD68 chr17 7579467 7582113 + protein_coding KNOWN OTTHUMG00000108146.4 2647 2189 18 ENSG00000233223.2 AC113189.5 chr17 7581964 7584072 - antisense NOVEL OTTHUMG00000132895.2 2109 1058 8 ENSG00000129255.13 MPDU1 chr17 7583529 7592789 + protein_coding KNOWN OTTHUMG00000108147.9 9261 3285 165 ENSG00000129194.6 SOX15 chr17 7588178 7590170 - protein_coding KNOWN OTTHUMG00000178146.1 1993 1541 6 ENSG00000129245.10 FXR2 chr17 7591230 7614871 - protein_coding KNOWN OTTHUMG00000178237.1 23642 4331 36 ENSG00000129214.13 SHBG chr17 7613946 7633383 + protein_coding KNOWN OTTHUMG00000108153.4 19438 1972 123 ENSG00000141504.10 SAT2 chr17 7626234 7627876 - protein_coding KNOWN OTTHUMG00000108152.3 1643 1643 57 ENSG00000143499.12 SMYD2 chr1 214281102 214337131 + protein_coding KNOWN OTTHUMG00000037066.4 56030 4889 50 ENSG00000129244.7 ATP1B2 chr17 7646627 7657768 + protein_coding KNOWN OTTHUMG00000178018.1 11142 3276 19 ENSG00000141510.14 TP53 chr17 7661779 7687550 - protein_coding KNOWN OTTHUMG00000162125.8 25772 3936 224 ENSG00000262251.1 RP11-199F11.2 chr17 7685260 7686371 - sense_intronic NOVEL OTTHUMG00000178019.1 1112 1112 1 ENSG00000141499.15 WRAP53 chr17 7686071 7703502 + protein_coding KNOWN OTTHUMG00000134323.4 17432 5087 82 ENSG00000108947.4 EFNB3 chr17 7705202 7711378 + protein_coding KNOWN OTTHUMG00000108161.1 6177 3222 5 ENSG00000183914.13 DNAH2 chr17 7717354 7833744 + protein_coding KNOWN OTTHUMG00000178020.1 116391 17231 232 ENSG00000240480.1 RPL29P2 chr17 7754320 7754976 + transcribed_processed_pseudogene KNOWN OTTHUMG00000157692.1 657 657 2 ENSG00000132510.9 KDM6B chr17 7839904 7854796 + protein_coding KNOWN OTTHUMG00000178021.1 14893 7258 62 ENSG00000167874.6 TMEM88 chr17 7855065 7856099 + protein_coding KNOWN OTTHUMG00000178022.1 1035 875 4 ENSG00000183011.12 NAA38 chr17 7856685 7885238 - protein_coding KNOWN OTTHUMG00000178023.3 28554 1943 23 ENSG00000228470.1 RP11-176D17.3 chr1 214344172 214357615 - sense_overlapping NOVEL OTTHUMG00000041153.1 13444 518 3 ENSG00000182224.10 CYB5D1 chr17 7857746 7862282 + protein_coding KNOWN OTTHUMG00000178175.1 4537 3980 18 ENSG00000280046.1 RP11-1099M24.6 chr17 7858943 7866083 + TEC KNOWN OTTHUMG00000178176.1 7141 7141 1 ENSG00000170004.15 CHD3 chr17 7884806 7912760 + protein_coding KNOWN OTTHUMG00000150427.3 27955 9758 190 ENSG00000252835.1 SCARNA21 chr17 7906122 7906260 + scaRNA KNOWN NA 139 139 1 ENSG00000179859.7 AC025335.1 chr17 7913324 7915953 - antisense NOVEL OTTHUMG00000132873.2 2630 2529 2 ENSG00000281523.1 AC104581.1 chr17 7920952 7921254 + protein_coding NOVEL NA 303 48 2 ENSG00000170049.8 KCNAB3 chr17 7921859 7929803 - protein_coding KNOWN OTTHUMG00000108170.2 7945 4580 44 ENSG00000262730.1 RP11-1099M24.7 chr17 7925931 7930622 - protein_coding NOVEL OTTHUMG00000178177.1 4692 348 6 ENSG00000170043.10 TRAPPC1 chr17 7930345 7932123 - protein_coding KNOWN OTTHUMG00000108171.2 1779 1171 26 ENSG00000170037.12 CNTROB chr17 7932101 7949918 + protein_coding KNOWN OTTHUMG00000172932.2 17818 6234 128 ENSG00000152104.10 PTPN14 chr1 214348696 214552449 - protein_coding KNOWN OTTHUMG00000037039.3 203754 18756 45 ENSG00000262492.1 RP11-1099M24.8 chr17 7954868 7955622 + processed_pseudogene KNOWN OTTHUMG00000178226.1 755 430 2 ENSG00000132518.6 GUCY2D chr17 8002594 8020339 + protein_coding KNOWN OTTHUMG00000108169.2 17746 4040 22 ENSG00000279174.1 RP11-1099M24.9 chr17 8013327 8016378 - TEC KNOWN OTTHUMG00000178227.1 3052 3052 1 ENSG00000179593.14 ALOX15B chr17 8039017 8049134 + protein_coding KNOWN OTTHUMG00000108181.3 10118 3028 66 ENSG00000263427.1 RP11-599B13.3 chr17 8056225 8057621 - lincRNA NOVEL OTTHUMG00000178304.1 1397 517 2 ENSG00000275011.1 RP11-599B13.9 chr17 8063936 8072533 + unprocessed_pseudogene KNOWN OTTHUMG00000187905.1 8598 1305 9 ENSG00000179477.8 ALOX12B chr17 8072636 8087703 - protein_coding KNOWN OTTHUMG00000108180.3 15068 2656 29 ENSG00000214999.3 AC129492.6 chr17 8079482 8081565 + antisense NOVEL OTTHUMG00000132872.1 2084 1804 2 ENSG00000264005.1 MIR4314 chr17 8088056 8088147 + miRNA KNOWN NA 92 92 1 ENSG00000179148.8 ALOXE3 chr17 8095900 8119047 - protein_coding KNOWN OTTHUMG00000108179.2 23148 3760 49 ENSG00000213036.3 RP11-365D23.4 chr1 214482813 214483387 - processed_pseudogene KNOWN OTTHUMG00000037016.1 575 575 1 ENSG00000179111.7 HES7 chr17 8120590 8124092 - protein_coding KNOWN OTTHUMG00000178316.1 3503 1868 13 ENSG00000179094.12 PER1 chr17 8140472 8156506 - protein_coding KNOWN OTTHUMG00000178317.3 16035 7002 147 ENSG00000278027.1 MIR6883 chr17 8144994 8145071 - miRNA KNOWN NA 78 78 1 ENSG00000263620.1 RP11-599B13.6 chr17 8150816 8162975 - protein_coding PUTATIVE OTTHUMG00000178326.1 12160 460 5 ENSG00000220205.7 VAMP2 chr17 8159149 8163546 - protein_coding KNOWN OTTHUMG00000150254.2 4398 3268 18 ENSG00000179029.13 TMEM107 chr17 8173237 8176399 - protein_coding KNOWN OTTHUMG00000166276.2 3163 3163 31 ENSG00000200463.1 SNORD118 chr17 8173454 8173587 - snoRNA KNOWN NA 134 134 1 ENSG00000266824.1 RP11-599B13.7 chr17 8176812 8182812 + lincRNA NOVEL OTTHUMG00000178442.1 6001 465 3 ENSG00000196544.7 C17orf59 chr17 8188333 8190907 - protein_coding KNOWN OTTHUMG00000153930.1 2575 2575 1 ENSG00000279152.1 AC129492.1 chr17 8188933 8189688 + protein_coding KNOWN NA 756 756 1 ENSG00000215819.3 KRT18P12 chr1 214532195 214533467 + processed_pseudogene KNOWN OTTHUMG00000037015.1 1273 1273 1 ENSG00000271002.1 RP11-599B13.8 chr17 8199123 8199437 - processed_pseudogene KNOWN OTTHUMG00000184850.1 315 315 1 ENSG00000178999.11 AURKB chr17 8204733 8210600 - protein_coding KNOWN OTTHUMG00000108189.4 5868 2241 86 ENSG00000178977.3 LINC00324 chr17 8220642 8224043 - lincRNA KNOWN OTTHUMG00000132866.2 3402 2082 3 ENSG00000178971.12 CTC1 chr17 8224821 8248044 - protein_coding KNOWN OTTHUMG00000178443.4 23224 8367 91 ENSG00000178921.12 PFAS chr17 8247618 8270491 + protein_coding KNOWN OTTHUMG00000108188.3 22874 6471 98 ENSG00000269947.1 RP11-849F2.9 chr17 8277763 8278436 + lincRNA NOVEL OTTHUMG00000183996.1 674 674 1 ENSG00000125434.9 SLC25A35 chr17 8287763 8295343 - protein_coding KNOWN OTTHUMG00000178480.2 7581 3897 42 ENSG00000108961.12 RANGRF chr17 8288497 8290092 + protein_coding KNOWN OTTHUMG00000178473.2 1596 1577 21 ENSG00000271029.1 RP11-849F2.10 chr17 8296505 8297216 - processed_pseudogene KNOWN OTTHUMG00000184852.1 712 398 2 ENSG00000198844.9 ARHGEF15 chr17 8310241 8322516 + protein_coding KNOWN OTTHUMG00000108187.3 12276 5294 48 ENSG00000117724.11 CENPF chr1 214603195 214664588 + protein_coding KNOWN OTTHUMG00000036955.1 61394 11690 37 ENSG00000226871.1 AC135178.7 chr17 8318088 8318712 - antisense NOVEL OTTHUMG00000132865.1 625 537 2 ENSG00000212206.1 SNORA69 chr17 8329583 8329719 + snoRNA NOVEL NA 137 137 1 ENSG00000266279.1 RP11-849F2.4 chr17 8337697 8338758 + lincRNA NOVEL OTTHUMG00000178519.1 1062 548 2 ENSG00000184650.8 ODF4 chr17 8339864 8346046 + protein_coding KNOWN OTTHUMG00000108190.2 6183 1156 6 ENSG00000265749.4 RP11-849F2.5 chr17 8365563 8381328 + antisense NOVEL OTTHUMG00000178521.1 15766 1408 9 ENSG00000184619.3 KRBA2 chr17 8368637 8376711 - protein_coding KNOWN OTTHUMG00000132864.1 8075 2794 4 ENSG00000263809.1 RP11-849F2.7 chr17 8368638 8383187 - protein_coding NOVEL OTTHUMG00000178564.1 14550 3087 6 ENSG00000161970.11 RPL26 chr17 8377520 8383213 - protein_coding KNOWN OTTHUMG00000108191.3 5694 2472 42 ENSG00000189051.5 RNF222 chr17 8390704 8397826 - protein_coding KNOWN OTTHUMG00000132049.2 7123 3070 4 ENSG00000166579.14 NDEL1 chr17 8413131 8490411 + protein_coding KNOWN OTTHUMG00000108193.2 77281 7955 89 ENSG00000250536.1 ABHD17AP3 chr1 214605470 214608840 - unprocessed_pseudogene KNOWN OTTHUMG00000036949.2 3371 1137 2 ENSG00000133026.11 MYH10 chr17 8474205 8630761 - protein_coding KNOWN OTTHUMG00000108195.3 156557 9011 155 ENSG00000252363.1 RNU7-43P chr17 8511125 8511188 + snRNA KNOWN NA 64 64 1 ENSG00000270606.1 RP11-713H12.2 chr17 8560471 8560962 + processed_pseudogene KNOWN OTTHUMG00000184909.1 492 492 1 ENSG00000244604.1 RP11-713H12.1 chr17 8561230 8561576 + processed_pseudogene KNOWN OTTHUMG00000157699.1 347 347 1 ENSG00000161973.9 CCDC42 chr17 8729934 8745219 - protein_coding KNOWN OTTHUMG00000178565.1 15286 1757 15 ENSG00000183318.10 SPDYE4 chr17 8753106 8758559 - protein_coding KNOWN OTTHUMG00000178566.1 5454 1063 15 ENSG00000185156.5 MFSD6L chr17 8797162 8799349 - protein_coding KNOWN OTTHUMG00000178584.1 2188 2188 1 ENSG00000276231.3 PIK3R6 chr17 8802723 8867677 - protein_coding KNOWN OTTHUMG00000132861.6 64955 3564 79 ENSG00000141506.12 PIK3R5 chr17 8878911 8965712 - protein_coding KNOWN OTTHUMG00000108197.4 86802 7506 207 ENSG00000266389.1 CTB-41I6.1 chr17 8965896 8967070 + lincRNA NOVEL OTTHUMG00000178278.1 1175 402 2 ENSG00000204481.7 PRAMEF14 chr1 13342034 13347134 - protein_coding KNOWN OTTHUMG00000007916.3 5101 2301 6 ENSG00000224584.2 RP11-365D23.2 chr1 214612960 214613398 - processed_pseudogene KNOWN OTTHUMG00000036954.2 439 439 1 ENSG00000265975.1 CTB-41I6.2 chr17 8967523 8976995 + lincRNA NOVEL OTTHUMG00000178279.1 9473 557 2 ENSG00000065320.7 NTN1 chr17 9021542 9244000 + protein_coding KNOWN OTTHUMG00000130257.5 222459 6383 11 ENSG00000262966.2 RP11-85B7.2 chr17 9171068 9179118 - antisense NOVEL OTTHUMG00000177893.2 8051 5672 4 ENSG00000273816.1 RP11-85B7.5 chr17 9244666 9244897 - lincRNA NOVEL OTTHUMG00000186625.1 232 232 1 ENSG00000170310.13 STX8 chr17 9250471 9576591 - protein_coding KNOWN OTTHUMG00000177844.12 326121 3779 50 ENSG00000263708.2 RP11-85B7.4 chr17 9283174 9305651 + antisense NOVEL OTTHUMG00000179476.2 22478 259 2 ENSG00000225751.2 AC087501.1 chr17 9452197 9470014 + antisense NOVEL OTTHUMG00000132850.2 17818 715 5 ENSG00000262815.1 RP11-565F19.4 chr17 9464742 9467422 + antisense NOVEL OTTHUMG00000177984.1 2681 513 2 ENSG00000263051.1 RP11-565F19.3 chr17 9547298 9548541 + antisense NOVEL OTTHUMG00000177985.1 1244 235 2 ENSG00000271851.1 RP11-565F19.2 chr17 9553323 9555696 - sense_intronic NOVEL OTTHUMG00000177967.2 2374 2374 1 ENSG00000185221.6 GAPDHP24 chr1 214870734 214871716 + processed_pseudogene KNOWN OTTHUMG00000037014.1 983 983 1 ENSG00000166596.13 CFAP52 chr17 9576627 9643459 + protein_coding KNOWN OTTHUMG00000150149.9 66833 3078 73 ENSG00000241654.1 RPL19P18 chr17 9589902 9590482 - processed_pseudogene KNOWN OTTHUMG00000157702.1 581 581 1 ENSG00000265349.1 RP11-55L4.2 chr17 9638768 9645325 - antisense NOVEL OTTHUMG00000178428.1 6558 212 2 ENSG00000154914.15 USP43 chr17 9644698 9729691 + protein_coding KNOWN OTTHUMG00000177942.9 84994 5068 68 ENSG00000262296.1 RP11-55L4.1 chr17 9647020 9647660 - antisense NOVEL OTTHUMG00000177943.1 641 195 2 ENSG00000184544.10 DHRS7C chr17 9771434 9791297 - protein_coding KNOWN OTTHUMG00000177944.4 19864 1006 15 ENSG00000278944.1 RP11-477N12.4 chr17 9791227 9808855 - processed_transcript NOVEL OTTHUMG00000189306.1 17629 202 3 ENSG00000214978.7 RP11-477N12.3 chr17 9802386 9822071 - protein_coding NOVEL OTTHUMG00000178429.6 19686 882 5 ENSG00000065325.11 GLP2R chr17 9822206 9892102 + protein_coding KNOWN OTTHUMG00000130269.11 69897 6052 41 ENSG00000265593.1 NPM1P45 chr17 9852748 9853306 - processed_pseudogene KNOWN OTTHUMG00000178430.1 559 559 1 ENSG00000223869.1 RP11-323K10.1 chr1 214943123 214943540 + processed_pseudogene KNOWN OTTHUMG00000037012.1 418 418 1 ENSG00000109047.7 RCVRN chr17 9896320 9905621 - protein_coding KNOWN OTTHUMG00000130268.4 9302 2921 5 ENSG00000007237.17 GAS7 chr17 9910609 10198551 - protein_coding KNOWN OTTHUMG00000177945.14 287943 10100 160 ENSG00000280845.1 Clostridiales-1 chr17 10005113 10005260 + sRNA NOVEL NA 148 148 1 ENSG00000221486.1 AC000003.1 chr17 10070890 10071004 + miRNA NOVEL NA 115 115 1 ENSG00000242692.1 RPS27AP1 chr17 10258762 10259232 + processed_pseudogene KNOWN OTTHUMG00000157706.1 471 471 1 ENSG00000273388.1 RP11-401O9.4 chr17 10291820 10317926 + antisense NOVEL OTTHUMG00000185938.1 26107 523 2 ENSG00000006788.11 MYH13 chr17 10298084 10373130 - protein_coding KNOWN OTTHUMG00000177987.4 75047 6349 121 ENSG00000264067.1 RP11-401O9.3 chr17 10320392 10341458 + antisense NOVEL OTTHUMG00000178465.1 21067 641 3 ENSG00000272736.4 RP11-799N11.1 chr17 10383132 10537862 + antisense NOVEL OTTHUMG00000186178.1 154731 769 8 ENSG00000272975.1 MYHAS chr17 10383144 10623886 + antisense NOVEL OTTHUMG00000186260.3 240743 2274 11 ENSG00000082482.12 KCNK2 chr1 215005775 215237093 + protein_coding KNOWN OTTHUMG00000037017.3 231319 3910 54 ENSG00000133020.4 MYH8 chr17 10390322 10421950 - protein_coding KNOWN OTTHUMG00000130361.2 31629 6041 40 ENSG00000264424.1 MYH4 chr17 10443290 10469559 - protein_coding KNOWN OTTHUMG00000130365.2 26270 6016 40 ENSG00000109061.9 MYH1 chr17 10492307 10518543 - protein_coding KNOWN OTTHUMG00000130362.2 26237 6024 40 ENSG00000125414.17 MYH2 chr17 10521148 10549957 - protein_coding KNOWN OTTHUMG00000130363.50 28810 6623 127 ENSG00000214970.7 CTC-297N7.7 chr17 10579040 10623036 + antisense NOVEL OTTHUMG00000178041.6 43997 1474 14 ENSG00000109063.13 MYH3 chr17 10628526 10657309 - protein_coding KNOWN OTTHUMG00000130367.5 28784 6684 54 ENSG00000261433.1 CTC-297N7.1 chr17 10658542 10659082 - lincRNA NOVEL OTTHUMG00000175966.1 541 541 1 ENSG00000133028.9 SCO1 chr17 10672474 10698375 - protein_coding KNOWN OTTHUMG00000130364.6 25902 10230 20 ENSG00000263388.1 CTC-297N7.10 chr17 10680734 10683988 + antisense NOVEL OTTHUMG00000178526.2 3255 171 2 ENSG00000170222.11 ADPRM chr17 10697594 10711233 + protein_coding KNOWN OTTHUMG00000130366.6 13640 1620 13 ENSG00000232809.1 VDAC1P10 chr1 215376484 215377374 + processed_pseudogene KNOWN OTTHUMG00000037013.1 891 891 1 ENSG00000187824.7 TMEM220 chr17 10699015 10730316 - protein_coding KNOWN OTTHUMG00000178043.4 31302 3508 26 ENSG00000264176.1 MAGOH2P chr17 10716002 10716511 - transcribed_processed_pseudogene KNOWN OTTHUMG00000178044.2 510 510 2 ENSG00000263400.5 TMEM220-AS1 chr17 10729777 10815164 + antisense KNOWN OTTHUMG00000178046.4 85388 2102 29 ENSG00000264016.2 CTC-297N7.9 chr17 10741267 10769016 - lincRNA NOVEL OTTHUMG00000178048.3 27750 941 4 ENSG00000240813.2 RP11-963H4.2 chr17 10745553 10746543 - processed_pseudogene KNOWN OTTHUMG00000157741.2 991 476 2 ENSG00000266114.1 RP11-963H4.5 chr17 10792059 10794985 + lincRNA NOVEL OTTHUMG00000178572.1 2927 575 3 ENSG00000263429.3 LINC00675 chr17 10794913 10804099 - lincRNA KNOWN OTTHUMG00000132847.6 9187 1648 4 ENSG00000279542.1 RP11-963H4.6 chr17 10821901 10822243 - TEC KNOWN OTTHUMG00000186014.1 343 343 1 ENSG00000233670.6 PIRT chr17 10822475 10838445 - protein_coding KNOWN OTTHUMG00000178234.2 15971 3810 2 ENSG00000263508.4 RP11-963H4.3 chr17 10849541 10880895 + lincRNA NOVEL OTTHUMG00000178198.3 31355 774 4 ENSG00000136636.11 KCTD3 chr1 215567392 215621807 + protein_coding KNOWN OTTHUMG00000037019.3 54416 4929 37 ENSG00000207242.1 RNU6-1065P chr17 10857899 10858004 - snRNA KNOWN NA 106 106 1 ENSG00000244753.2 RPL15P21 chr17 10860535 10861462 - processed_pseudogene KNOWN OTTHUMG00000157731.2 928 567 2 ENSG00000281891.1 AC005284.2 chr17 10995707 10995773 - miRNA NOVEL NA 67 67 1 ENSG00000221701.1 AC005284.1 chr17 11053788 11053935 + miRNA NOVEL NA 148 148 1 ENSG00000243346.3 RN7SL601P chr17 11157455 11157747 + misc_RNA KNOWN NA 293 293 1 ENSG00000188803.13 SHISA6 chr17 11241263 11564063 + protein_coding KNOWN OTTHUMG00000154121.6 322801 8527 18 ENSG00000253002.1 AC005725.1 chr17 11267305 11267379 - miRNA NOVEL NA 75 75 1 ENSG00000264727.1 RP11-680C21.1 chr17 11288205 11290811 + lincRNA NOVEL OTTHUMG00000178265.1 2607 2607 1 ENSG00000007174.16 DNAH9 chr17 11598431 11969748 + protein_coding KNOWN OTTHUMG00000130383.8 371318 16980 209 ENSG00000263623.1 AC005701.1 chr17 11741376 11741464 - miRNA NOVEL NA 89 89 1 ENSG00000042781.11 USH2A chr1 215622894 216423396 - protein_coding KNOWN OTTHUMG00000037079.5 800503 20506 99 ENSG00000263684.1 RP11-628O18.1 chr17 11874932 11875828 - antisense NOVEL OTTHUMG00000178313.1 897 289 2 ENSG00000266368.1 RP11-1096G20.5 chr17 11953889 11977594 - antisense NOVEL OTTHUMG00000179652.1 23706 463 2 ENSG00000154957.12 ZNF18 chr17 11977439 11997510 - protein_coding KNOWN OTTHUMG00000178307.4 20072 3012 41 ENSG00000241185.2 RPL21P122 chr17 11998353 12021508 - transcribed_processed_pseudogene KNOWN OTTHUMG00000157743.3 23156 1000 7 ENSG00000065559.13 MAP2K4 chr17 12020824 12143830 + protein_coding KNOWN OTTHUMG00000178267.7 123007 5714 109 ENSG00000252707.1 RNU11-2P chr17 12036496 12036637 - snRNA KNOWN NA 142 142 1 ENSG00000266297.1 MIR744 chr17 12081899 12081996 + miRNA KNOWN NA 98 98 1 ENSG00000263648.1 RP11-471L13.3 chr17 12115547 12115885 + processed_pseudogene KNOWN OTTHUMG00000178314.1 339 339 1 ENSG00000265400.1 RP11-471L13.2 chr17 12201600 12215267 + lincRNA NOVEL OTTHUMG00000178315.1 13668 718 4 ENSG00000179136.5 LINC00670 chr17 12549782 12642854 + lincRNA KNOWN OTTHUMG00000058766.2 93073 3410 9 ENSG00000202498.1 SNORD116 chr1 215630026 215630117 - snoRNA NOVEL NA 92 92 1 ENSG00000141052.16 MYOCD chr17 12665890 12768949 + protein_coding KNOWN OTTHUMG00000058767.5 103060 8875 47 ENSG00000227274.1 AC005358.3 chr17 12671862 12706135 - antisense NOVEL OTTHUMG00000058769.1 34274 1143 3 ENSG00000265489.1 RP11-1090M7.1 chr17 12760140 12790242 - antisense NOVEL OTTHUMG00000178329.1 30103 3679 2 ENSG00000006740.15 ARHGAP44 chr17 12789539 12991643 + protein_coding KNOWN OTTHUMG00000058765.5 202105 9281 133 ENSG00000265503.1 MIR1269B chr17 12917268 12917342 - miRNA KNOWN NA 75 75 1 ENSG00000280168.1 RP11-1090M7.3 chr17 12973033 12973834 - TEC KNOWN OTTHUMG00000178335.1 802 802 1 ENSG00000277621.1 RP11-597M12.2 chr17 12982613 12983002 - antisense NOVEL OTTHUMG00000186626.1 390 390 1 ENSG00000263707.1 RP11-597M12.1 chr17 12990149 12990610 - antisense NOVEL OTTHUMG00000179287.1 462 335 2 ENSG00000006744.17 ELAC2 chr17 12992391 13018187 - protein_coding KNOWN OTTHUMG00000058764.14 25797 6345 243 ENSG00000273098.1 RP11-488L1.1 chr17 13095908 13100928 + lincRNA NOVEL OTTHUMG00000185880.1 5021 740 2 ENSG00000229242.1 RP5-1111A8.3 chr1 215886582 215901464 + antisense NOVEL OTTHUMG00000037063.1 14883 800 2 ENSG00000234634.1 AC003664.1 chr17 13299184 13306760 - lincRNA NOVEL OTTHUMG00000058770.1 7577 485 5 ENSG00000153976.2 HS3ST3A1 chr17 13495689 13601927 - protein_coding KNOWN OTTHUMG00000058768.2 106239 2628 4 ENSG00000266115.1 AC005375.1 chr17 13500254 13500328 - miRNA NOVEL NA 75 75 1 ENSG00000221698.1 MIR548H3 chr17 13543529 13543646 - miRNA KNOWN NA 118 118 1 ENSG00000236088.8 COX10-AS1 chr17 13756478 14069495 - processed_transcript KNOWN OTTHUMG00000058771.6 313018 6456 21 ENSG00000265494.1 RP11-131K5.2 chr17 13909231 13911212 + lincRNA NOVEL OTTHUMG00000178474.1 1982 1982 1 ENSG00000233852.1 AC005304.1 chr17 13932720 13940594 - lincRNA NOVEL OTTHUMG00000058802.1 7875 405 3 ENSG00000266744.1 RP11-131K5.1 chr17 13957748 13966952 - lincRNA NOVEL OTTHUMG00000178357.1 9205 511 3 ENSG00000141028.6 CDRT15P1 chr17 14024514 14025488 + unprocessed_pseudogene KNOWN OTTHUMG00000178372.2 975 564 3 ENSG00000006695.9 COX10 chr17 14069496 14208677 + protein_coding KNOWN OTTHUMG00000058814.2 139182 3172 22 ENSG00000233620.4 RP11-22M7.2 chr1 216072465 216086917 + antisense NOVEL OTTHUMG00000037062.2 14453 774 11 ENSG00000252305.1 SNORA74 chr17 14177131 14177310 + snoRNA NOVEL NA 180 180 1 ENSG00000231595.1 AC005224.2 chr17 14210488 14217922 + lincRNA NOVEL OTTHUMG00000058809.1 7435 1537 3 ENSG00000223510.5 CDRT15 chr17 14235673 14236862 - protein_coding KNOWN OTTHUMG00000179686.1 1190 779 6 ENSG00000262786.1 RP11-214O1.1 chr17 14295512 14297600 - lincRNA NOVEL OTTHUMG00000177837.1 2089 1885 2 ENSG00000125430.7 HS3ST3B1 chr17 14301083 14349404 + protein_coding KNOWN OTTHUMG00000058810.3 48322 5367 5 ENSG00000266709.1 RP11-214O1.2 chr17 14303854 14305505 + lincRNA NOVEL OTTHUMG00000178358.1 1652 1652 1 ENSG00000266378.1 RP11-214O1.3 chr17 14327335 14329474 + lincRNA NOVEL OTTHUMG00000179687.1 2140 2140 1 ENSG00000230647.1 AC022816.2 chr17 14374139 14421026 + lincRNA NOVEL OTTHUMG00000058811.1 46888 804 5 ENSG00000230897.1 RPS18P12 chr17 14705076 14705534 - processed_pseudogene KNOWN OTTHUMG00000058815.1 459 459 1 ENSG00000226130.1 AC013248.2 chr17 14725729 14729686 + lincRNA NOVEL OTTHUMG00000058813.1 3958 232 2 ENSG00000204480.7 PRAMEF19 chr1 13369067 13371693 - protein_coding KNOWN OTTHUMG00000007919.3 2627 1233 3 ENSG00000236292.1 RP5-1099E6.3 chr1 216194051 216204366 + antisense NOVEL OTTHUMG00000037078.2 10316 699 3 ENSG00000205325.1 AC005863.1 chr17 14767583 14780203 - lincRNA NOVEL OTTHUMG00000058812.1 12621 2998 2 ENSG00000238212.2 AC005863.2 chr17 14834638 14900554 + lincRNA NOVEL OTTHUMG00000058804.2 65917 953 4 ENSG00000226156.1 RPL23AP76 chr17 14947741 14948198 - processed_pseudogene KNOWN OTTHUMG00000058805.2 458 458 1 ENSG00000232058.1 AC005772.2 chr17 15014805 15052276 + lincRNA NOVEL OTTHUMG00000059072.1 37472 976 2 ENSG00000259944.1 CDRT7 chr17 15030975 15031957 + lincRNA KNOWN OTTHUMG00000058961.1 983 767 3 ENSG00000265163.1 CDRT8 chr17 15105237 15106187 - lincRNA NOVEL OTTHUMG00000178871.1 951 467 2 ENSG00000109099.12 PMP22 chr17 15229777 15265326 - protein_coding KNOWN OTTHUMG00000058960.4 35550 2925 36 ENSG00000265110.1 MIR4731 chr17 15251627 15251696 - miRNA KNOWN NA 70 70 1 ENSG00000279660.1 RP11-849N15.3 chr17 15260513 15261841 + TEC KNOWN OTTHUMG00000178587.1 1329 1329 1 ENSG00000265445.1 RP11-849N15.1 chr17 15261015 15265707 + antisense NOVEL OTTHUMG00000178498.1 4693 373 2 ENSG00000226013.1 MRPS18BP1 chr1 216201635 216201826 - processed_pseudogene KNOWN OTTHUMG00000037077.1 192 192 1 ENSG00000230971.1 AC005703.3 chr17 15267461 15272290 - lincRNA NOVEL OTTHUMG00000058962.1 4830 1773 2 ENSG00000237377.2 AC005703.2 chr17 15276562 15279477 - lincRNA NOVEL OTTHUMG00000058964.2 2916 343 3 ENSG00000125409.11 TEKT3 chr17 15303811 15341641 - protein_coding KNOWN OTTHUMG00000058965.6 37831 2609 46 ENSG00000200437.1 RNU6-799P chr17 15311345 15311451 + snRNA KNOWN NA 107 107 1 ENSG00000279567.1 RP11-849N15.5 chr17 15365323 15365877 + TEC KNOWN OTTHUMG00000178588.1 555 555 1 ENSG00000266667.1 RP11-849N15.4 chr17 15379864 15417878 - lincRNA NOVEL OTTHUMG00000178589.1 38015 538 4 ENSG00000239888.3 RN7SL792P chr17 15408384 15408688 + misc_RNA KNOWN NA 305 305 1 ENSG00000239704.9 CDRT4 chr17 15436015 15503608 - protein_coding KNOWN OTTHUMG00000059070.12 67594 3245 11 ENSG00000259024.5 TVP23C-CDRT4 chr17 15436021 15563561 - protein_coding KNOWN OTTHUMG00000165004.4 127541 3097 27 ENSG00000234324.1 RPL9P2 chr17 15443639 15444191 + processed_pseudogene KNOWN OTTHUMG00000059068.1 553 553 1 ENSG00000196482.15 ESRRG chr1 216503246 217137755 - protein_coding KNOWN OTTHUMG00000037025.12 634510 10912 156 ENSG00000175106.15 TVP23C chr17 15502264 15563595 - protein_coding KNOWN OTTHUMG00000171461.9 61332 5435 57 ENSG00000223878.1 AC005517.3 chr17 15506866 15507354 + processed_pseudogene KNOWN OTTHUMG00000059069.1 489 489 1 ENSG00000266538.1 RP11-385D13.3 chr17 15530773 15531089 - lincRNA NOVEL OTTHUMG00000178873.1 317 317 1 ENSG00000241322.7 CDRT1 chr17 15565483 15619704 - protein_coding KNOWN OTTHUMG00000059074.6 54222 4478 48 ENSG00000251537.4 RP11-385D13.1 chr17 15571491 15651653 - protein_coding NOVEL OTTHUMG00000160985.3 80163 5514 17 ENSG00000252129.1 SNORA74 chr17 15574019 15574198 + snoRNA NOVEL NA 180 180 1 ENSG00000223544.1 AC005838.2 chr17 15588852 15589084 + unprocessed_pseudogene KNOWN OTTHUMG00000059075.2 233 233 1 ENSG00000221926.10 TRIM16 chr17 15627960 15684311 - protein_coding KNOWN OTTHUMG00000059067.5 56352 5640 132 ENSG00000266261.1 RP11-640I15.1 chr17 15651590 15654489 + antisense NOVEL OTTHUMG00000179072.1 2900 571 2 ENSG00000108452.1 ZNF29P chr17 15675476 15675643 + unprocessed_pseudogene KNOWN OTTHUMG00000059142.2 168 168 1 ENSG00000092978.9 GPATCH2 chr1 217426992 217631082 - protein_coding KNOWN OTTHUMG00000000527.8 204091 8833 27 ENSG00000187607.14 ZNF286A chr17 15699577 15720787 + protein_coding KNOWN OTTHUMG00000166448.13 21211 6754 90 ENSG00000255104.6 ZNF286A chr17 15699692 15744783 + protein_coding NOVEL OTTHUMG00000059066.14 45092 4500 55 ENSG00000233966.1 UBE2SP1 chr17 15704232 15704900 - processed_pseudogene KNOWN OTTHUMG00000059073.1 669 669 1 ENSG00000214946.12 TBC1D26 chr17 15732247 15749192 + protein_coding KNOWN OTTHUMG00000059071.5 16946 5370 78 ENSG00000233002.2 AC005324.6 chr17 15735023 15749192 - antisense NOVEL OTTHUMG00000059148.2 14170 1582 8 ENSG00000267227.1 RP11-640I15.2 chr17 15748703 15749315 - processed_pseudogene KNOWN OTTHUMG00000179850.1 613 613 1 ENSG00000233193.1 AC005324.7 chr17 15761614 15763769 - lincRNA NOVEL OTTHUMG00000059149.1 2156 415 2 ENSG00000227255.1 CDRT15P2 chr17 15764703 15765664 + unprocessed_pseudogene KNOWN OTTHUMG00000059141.2 962 416 3 ENSG00000235430.1 ZSWIM5P1 chr17 15768717 15771426 - processed_pseudogene KNOWN OTTHUMG00000059143.1 2710 1970 2 ENSG00000251829.1 RNA5SP436 chr17 15782341 15782455 + rRNA KNOWN NA 115 115 1 ENSG00000162814.9 SPATA17 chr1 217631324 217871696 + protein_coding KNOWN OTTHUMG00000037875.6 240373 6515 31 ENSG00000227018.1 IL6STP1 chr17 15783288 15784307 + processed_pseudogene KNOWN OTTHUMG00000059144.1 1020 1020 1 ENSG00000179277.9 MEIS3P1 chr17 15786618 15787575 + processed_pseudogene KNOWN OTTHUMG00000059145.3 958 958 1 ENSG00000265519.1 CTD-3157E16.1 chr17 15787787 15788205 - lincRNA NOVEL OTTHUMG00000179073.1 419 347 2 ENSG00000276855.1 CTD-3157E16.2 chr17 15789016 15789705 + lincRNA NOVEL OTTHUMG00000186632.1 690 690 1 ENSG00000233090.1 AC015922.7 chr17 15792862 15793045 + unprocessed_pseudogene KNOWN OTTHUMG00000130863.1 184 184 1 ENSG00000237057.2 AC015922.6 chr17 15806241 15817742 - lincRNA NOVEL OTTHUMG00000059147.2 11502 951 3 ENSG00000227790.5 AC015922.5 chr17 15829369 15864153 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000059146.2 34785 1368 12 ENSG00000170425.3 ADORA2B chr17 15944917 15975746 + protein_coding KNOWN OTTHUMG00000059140.2 30830 2551 3 ENSG00000214941.6 ZSWIM7 chr17 15976560 15999717 - protein_coding KNOWN OTTHUMG00000059308.5 23158 2559 103 ENSG00000011295.14 TTC19 chr17 15999380 16045015 + protein_coding KNOWN OTTHUMG00000059306.10 45636 5966 53 ENSG00000234070.1 SPATA17-AS1 chr1 217781198 217785120 - antisense NOVEL OTTHUMG00000038051.1 3923 420 3 ENSG00000275413.1 CTC-529I10.1 chr17 16023323 16023653 - antisense NOVEL OTTHUMG00000186633.1 331 331 1 ENSG00000141027.19 NCOR1 chr17 16029157 16218185 - protein_coding KNOWN OTTHUMG00000059309.10 189029 15404 329 ENSG00000227782.2 CTC-529I10.2 chr17 16040472 16041273 + antisense NOVEL OTTHUMG00000187025.1 802 802 1 ENSG00000243686.2 RPLP1P11 chr17 16044621 16044961 + processed_pseudogene KNOWN OTTHUMG00000059307.2 341 341 1 ENSG00000233979.1 AC002553.4 chr17 16084042 16084381 + processed_pseudogene KNOWN OTTHUMG00000059344.2 340 340 1 ENSG00000252383.1 RNU6-314P chr17 16098704 16098807 + snRNA KNOWN NA 104 104 1 ENSG00000199674.1 RNU6-862P chr17 16137768 16137872 - snRNA KNOWN NA 105 105 1 ENSG00000239221.3 RN7SL442P chr17 16191832 16192151 + misc_RNA KNOWN NA 320 320 1 ENSG00000108474.15 PIGL chr17 16217191 16351797 + protein_coding KNOWN OTTHUMG00000059346.9 134607 6162 67 ENSG00000221355.1 MIR1288 chr17 16282014 16282088 + miRNA KNOWN NA 75 75 1 ENSG00000228247.1 UBBP2 chr1 217850403 217850633 - processed_pseudogene KNOWN OTTHUMG00000038050.1 231 231 1 ENSG00000166582.8 CENPV chr17 16342534 16353656 - protein_coding KNOWN OTTHUMG00000059345.3 11123 2302 21 ENSG00000170315.12 UBB chr17 16380798 16382745 + protein_coding KNOWN OTTHUMG00000058987.4 1948 1621 19 ENSG00000265401.1 RP11-138I1.4 chr17 16382152 16382669 - antisense NOVEL OTTHUMG00000179350.1 518 461 2 ENSG00000265095.1 FTLP12 chr17 16391434 16391882 + processed_pseudogene KNOWN OTTHUMG00000179839.1 449 449 1 ENSG00000264739.1 RP11-138I1.2 chr17 16414524 16416689 - antisense NOVEL OTTHUMG00000179142.1 2166 2166 1 ENSG00000187688.13 TRPV2 chr17 16415542 16437003 + protein_coding KNOWN OTTHUMG00000058989.8 21462 3410 41 ENSG00000239203.1 AC093484.4 chr17 16427474 16428719 + processed_transcript NOVEL OTTHUMG00000058991.1 1246 477 2 ENSG00000175061.16 LRRC75A-AS1 chr17 16438822 16478678 + processed_transcript KNOWN OTTHUMG00000058990.5 39857 3759 146 ENSG00000277108.1 SNORD49 chr17 16439505 16439576 + snoRNA NOVEL NA 72 72 1 ENSG00000277370.1 SNORD49A chr17 16440036 16440106 + snoRNA KNOWN NA 71 71 1 ENSG00000231814.2 LINC00210 chr1 217892900 217920804 + lincRNA KNOWN OTTHUMG00000039497.2 27905 1584 4 ENSG00000266651.1 RP11-138I1.3 chr17 16440479 16440952 - lincRNA NOVEL OTTHUMG00000179325.1 474 304 2 ENSG00000277512.1 SNORD65 chr17 16441226 16441298 + snoRNA KNOWN NA 73 73 1 ENSG00000181350.10 LRRC75A chr17 16441577 16492153 - protein_coding KNOWN OTTHUMG00000058988.3 50577 3695 10 ENSG00000141040.13 ZNF287 chr17 16551387 16569206 - protein_coding KNOWN OTTHUMG00000058993.3 17820 3566 21 ENSG00000266803.1 RP1-77H15.1 chr17 16557985 16559269 - sense_intronic NOVEL OTTHUMG00000179359.1 1285 689 2 ENSG00000235554.1 AC005822.1 chr17 16616848 16617881 - processed_pseudogene KNOWN OTTHUMG00000058997.1 1034 1034 1 ENSG00000197566.8 ZNF624 chr17 16620737 16653856 - protein_coding KNOWN OTTHUMG00000058996.4 33120 5090 21 ENSG00000264765.1 RP11-92B11.4 chr17 16653904 16654787 + lincRNA NOVEL OTTHUMG00000178960.1 884 771 2 ENSG00000264359.1 NEK4P2 chr17 16666107 16667118 - processed_pseudogene KNOWN OTTHUMG00000178961.1 1012 1012 1 ENSG00000231458.2 RNASEH1P2 chr17 16683438 16684227 + processed_pseudogene KNOWN OTTHUMG00000059176.2 790 790 1 ENSG00000230714.1 RP11-152L7.1 chr1 218031835 218033660 + lincRNA NOVEL OTTHUMG00000039495.1 1826 215 2 ENSG00000170160.15 CCDC144A chr17 16689537 16777881 + protein_coding KNOWN OTTHUMG00000059178.6 88345 15566 97 ENSG00000266302.4 RP11-219A15.1 chr17 16690261 16804453 + protein_coding NOVEL OTTHUMG00000179236.1 114193 8804 37 ENSG00000252446.1 RNU6-405P chr17 16691798 16691907 + snRNA KNOWN NA 110 110 1 ENSG00000276088.1 Metazoa_SRP chr17 16710059 16710361 + misc_RNA NOVEL NA 303 303 1 ENSG00000226478.3 UPF3AP1 chr17 16745636 16746761 - processed_pseudogene KNOWN OTTHUMG00000059169.1 1126 1126 1 ENSG00000188933.13 USP32P1 chr17 16786489 16804455 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000186451.1 17967 7676 44 ENSG00000266129.1 SRP68P1 chr17 16787235 16788141 - processed_pseudogene KNOWN OTTHUMG00000178995.1 907 269 2 ENSG00000272815.1 RP11-219A15.4 chr17 16788057 16816540 + processed_transcript NOVEL OTTHUMG00000059170.3 28484 3243 11 ENSG00000264673.1 RP11-92B11.3 chr17 16788248 16789234 - antisense NOVEL OTTHUMG00000178962.1 987 686 2 ENSG00000266486.1 FAM106CP chr17 16788901 16789407 + processed_pseudogene KNOWN OTTHUMG00000178951.1 507 507 1 ENSG00000232100.1 RP11-152L7.2 chr1 218043505 218059140 + lincRNA NOVEL OTTHUMG00000039496.1 15636 1728 4 ENSG00000264729.1 RP11-219A15.2 chr17 16804627 16805707 + lincRNA NOVEL OTTHUMG00000179237.1 1081 302 2 ENSG00000264892.1 NOS2P4 chr17 16812447 16812651 + processed_pseudogene KNOWN OTTHUMG00000179841.1 205 205 1 ENSG00000226145.6 KRT16P6 chr17 16817983 16822579 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000059171.4 4597 1906 21 ENSG00000227300.11 KRT16P2 chr17 16829999 16832830 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000059177.5 2832 1500 12 ENSG00000131885.15 KRT17P1 chr17 16840743 16845883 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000059175.2 5141 2387 19 ENSG00000205312.7 KRT17P4 chr17 16847635 16852777 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000059174.2 5143 2964 25 ENSG00000229749.1 COTL1P1 chr17 16853935 16854309 + processed_pseudogene KNOWN OTTHUMG00000059172.1 375 375 1 ENSG00000265853.1 RP1-48J14.1 chr17 16893198 16893429 - processed_pseudogene KNOWN OTTHUMG00000179163.1 232 232 1 ENSG00000128438.9 TBC1D27 chr17 16922915 16934839 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000059260.4 11925 5250 31 ENSG00000240505.7 TNFRSF13B chr17 16929816 16972118 - protein_coding KNOWN OTTHUMG00000059262.5 42303 3550 31 ENSG00000248527.1 MTATP6P1 chr1 633696 634376 + unprocessed_pseudogene KNOWN OTTHUMG00000002335.2 681 681 1 ENSG00000204479.4 PRAMEF17 chr1 13389632 13392629 + protein_coding KNOWN OTTHUMG00000007909.3 2998 1578 3 ENSG00000201493.1 RNU1-141P chr1 218129795 218129952 + snRNA KNOWN NA 158 158 1 ENSG00000230709.1 AC104024.1 chr17 16975999 16981353 - lincRNA NOVEL OTTHUMG00000059261.1 5355 2201 3 ENSG00000230969.2 AC104024.2 chr17 16988329 16990177 + lincRNA NOVEL OTTHUMG00000059263.2 1849 400 3 ENSG00000260328.1 RP11-416I2.1 chr17 17011914 17014990 - lincRNA NOVEL OTTHUMG00000175970.1 3077 3077 1 ENSG00000133030.18 MPRIP chr17 17042545 17217679 + protein_coding KNOWN OTTHUMG00000059276.8 175135 18105 134 ENSG00000225442.2 MPRIP-AS1 chr17 17076038 17077752 - antisense NOVEL OTTHUMG00000059279.2 1715 1058 2 ENSG00000263624.1 RP11-45M22.3 chr17 17167946 17185554 - antisense NOVEL OTTHUMG00000179183.1 17609 1231 2 ENSG00000206859.1 RNU6-767P chr17 17170083 17170189 + snRNA KNOWN NA 107 107 1 ENSG00000243370.3 RN7SL775P chr17 17178414 17178749 + misc_RNA KNOWN NA 336 336 1 ENSG00000278864.1 RP11-45M22.2 chr17 17181504 17183257 + TEC KNOWN OTTHUMG00000179184.1 1754 1754 1 ENSG00000179598.5 PLD6 chr17 17200995 17206315 - protein_coding KNOWN OTTHUMG00000059278.2 5321 2560 2 ENSG00000067533.5 RRP15 chr1 218285287 218337983 + protein_coding KNOWN OTTHUMG00000039494.4 52697 7883 7 ENSG00000264187.1 RP11-45M22.4 chr17 17202649 17237185 - protein_coding NOVEL OTTHUMG00000179185.1 34537 1693 12 ENSG00000154803.11 FLCN chr17 17212212 17237188 - protein_coding KNOWN OTTHUMG00000059275.3 24977 9786 44 ENSG00000266498.1 RP11-45M22.5 chr17 17235433 17236118 - lincRNA NOVEL OTTHUMG00000179384.1 686 686 1 ENSG00000226359.1 POTENP chr17 17242010 17242886 + processed_pseudogene KNOWN OTTHUMG00000059280.1 877 877 1 ENSG00000265109.1 AC055811.1 chr17 17242564 17242647 + miRNA NOVEL NA 84 84 1 ENSG00000141030.11 COPS3 chr17 17246820 17281293 - protein_coding KNOWN OTTHUMG00000059281.5 34474 2788 114 ENSG00000205309.12 NT5M chr17 17303335 17347663 + protein_coding KNOWN OTTHUMG00000059277.3 44329 1961 31 ENSG00000215030.5 RPL13P12 chr17 17383377 17384012 - processed_pseudogene KNOWN OTTHUMG00000059294.2 636 636 1 ENSG00000227158.1 AC073621.2 chr17 17422681 17423704 + processed_pseudogene KNOWN OTTHUMG00000059295.1 1024 1024 1 ENSG00000230865.1 TSEN15P1 chr17 17456427 17457259 + processed_pseudogene KNOWN OTTHUMG00000059289.1 833 515 2 ENSG00000229016.1 RP11-224O19.4 chr1 218301262 218301972 - processed_pseudogene KNOWN OTTHUMG00000039568.1 711 711 1 ENSG00000201741.1 Y_RNA chr17 17460444 17460522 + misc_RNA NOVEL NA 79 79 1 ENSG00000141026.5 MED9 chr17 17476986 17493226 + protein_coding KNOWN OTTHUMG00000059293.2 16241 5998 9 ENSG00000108551.4 RASD1 chr17 17494437 17496395 - protein_coding KNOWN OTTHUMG00000059292.3 1959 1748 4 ENSG00000133027.16 PEMT chr17 17505563 17591708 - protein_coding KNOWN OTTHUMG00000059290.5 86146 1720 72 ENSG00000265511.1 RP11-524F11.1 chr17 17507351 17508308 + antisense NOVEL OTTHUMG00000178674.1 958 795 2 ENSG00000206730.1 RNU6-468P chr17 17578631 17578739 + snRNA KNOWN NA 109 109 1 ENSG00000264666.1 RP11-524F11.2 chr17 17591428 17610485 + antisense NOVEL OTTHUMG00000179385.1 19058 425 2 ENSG00000279200.1 RP11-524F11.3 chr17 17616043 17617745 + TEC KNOWN OTTHUMG00000179600.1 1703 1703 1 ENSG00000223979.2 SMCR2 chr17 17674026 17677688 - lincRNA KNOWN OTTHUMG00000059291.2 3663 564 4 ENSG00000273948.1 SMCR2_1 chr17 17675366 17675522 + misc_RNA NOVEL NA 157 157 1 ENSG00000223375.1 RP11-224O19.5 chr1 218338541 218338756 + processed_pseudogene KNOWN OTTHUMG00000057823.1 216 216 1 ENSG00000274836.1 SMCR2_2 chr17 17676211 17676371 + misc_RNA NOVEL NA 161 161 1 ENSG00000108557.16 RAI1 chr17 17681473 17811453 + protein_coding KNOWN OTTHUMG00000059314.2 129981 9693 18 ENSG00000237328.1 RAI1-AS1 chr17 17759154 17770821 - antisense NOVEL OTTHUMG00000059315.2 11668 724 3 ENSG00000226746.2 SMCR5 chr17 17776686 17779529 - antisense KNOWN OTTHUMG00000178769.1 2844 2844 1 ENSG00000264167.1 RP1-253P7.1 chr17 17777781 17779094 + sense_intronic NOVEL OTTHUMG00000178675.1 1314 466 2 ENSG00000072310.15 SREBF1 chr17 17810399 17837002 - protein_coding KNOWN OTTHUMG00000059313.7 26604 8030 149 ENSG00000274111.1 MIR6777 chr17 17813480 17813545 - miRNA KNOWN NA 66 66 1 ENSG00000207839.1 MIR33B chr17 17813836 17813931 - miRNA KNOWN NA 96 96 1 ENSG00000175662.16 TOM1L2 chr17 17843511 17972422 - protein_coding KNOWN OTTHUMG00000059353.6 128912 7863 129 ENSG00000197815.4 RP1-253P7.4 chr17 17858227 17860041 + antisense NOVEL OTTHUMG00000186877.1 1815 1815 1 ENSG00000232480.1 TGFB2-AS1 chr1 218344196 218345678 - antisense NOVEL OTTHUMG00000039520.1 1483 557 3 ENSG00000171962.16 LRRC48 chr17 17972813 18016889 + protein_coding KNOWN OTTHUMG00000059355.6 44077 7332 114 ENSG00000171953.14 ATPAF2 chr17 17977409 18039209 - protein_coding KNOWN OTTHUMG00000059354.9 61801 5564 62 ENSG00000230273.1 AC087163.3 chr17 17981192 17981572 - processed_pseudogene KNOWN OTTHUMG00000059357.1 381 381 1 ENSG00000281749.1 Y_RNA chr17 18001101 18001195 - misc_RNA NOVEL NA 95 95 1 ENSG00000232344.2 AC087163.2 chr17 18010643 18011822 + processed_pseudogene KNOWN OTTHUMG00000059356.2 1180 853 2 ENSG00000280198.1 RP11-384M20.1 chr17 18026072 18026771 - TEC KNOWN OTTHUMG00000178828.1 700 700 1 ENSG00000141034.8 GID4 chr17 18039292 18068404 + protein_coding KNOWN OTTHUMG00000059398.4 29113 5210 20 ENSG00000108591.8 DRG2 chr17 18087886 18107971 + protein_coding KNOWN OTTHUMG00000059399.6 20086 7411 135 ENSG00000279428.1 RP11-258F1.2 chr17 18107334 18110463 - TEC KNOWN OTTHUMG00000180330.1 3130 3130 1 ENSG00000091536.15 MYO15A chr17 18108706 18179802 + protein_coding KNOWN OTTHUMG00000059390.6 71097 19123 249 ENSG00000092969.10 TGFB2 chr1 218346235 218444619 + protein_coding KNOWN OTTHUMG00000039521.2 98385 5151 23 ENSG00000266677.1 RP11-258F1.1 chr17 18172625 18184753 - antisense NOVEL OTTHUMG00000179407.1 12129 2279 5 ENSG00000091542.8 ALKBH5 chr17 18183078 18209954 + protein_coding KNOWN OTTHUMG00000059397.5 26877 3190 10 ENSG00000131899.9 LLGL1 chr17 18225587 18244875 + protein_coding KNOWN OTTHUMG00000059396.3 19289 6638 62 ENSG00000177731.14 FLII chr17 18244836 18258916 - protein_coding KNOWN OTTHUMG00000059389.9 14081 6465 246 ENSG00000177427.11 MIEF2 chr17 18260534 18266552 + protein_coding KNOWN OTTHUMG00000059392.3 6019 3969 32 ENSG00000260647.1 RP1-178F10.1 chr17 18268080 18268828 + antisense NOVEL OTTHUMG00000175974.1 749 749 1 ENSG00000177302.13 TOP3A chr17 18271428 18315007 - protein_coding KNOWN OTTHUMG00000059391.6 43580 6476 166 ENSG00000228000.1 RPL7AP65 chr17 18311904 18312651 + processed_pseudogene KNOWN OTTHUMG00000059393.1 748 748 1 ENSG00000237382.2 RPL21P121 chr17 18312760 18313533 + processed_pseudogene KNOWN OTTHUMG00000059395.2 774 465 2 ENSG00000176994.10 SMCR8 chr17 18315310 18328055 + protein_coding KNOWN OTTHUMG00000059394.4 12746 8279 2 ENSG00000281453.1 TGFB2-OT1 chr1 218442626 218443996 + 3prime_overlapping_ncrna KNOWN OTTHUMG00000189749.1 1371 1371 1 ENSG00000176974.16 SHMT1 chr17 18327860 18363563 - protein_coding KNOWN OTTHUMG00000059094.5 35704 7281 76 ENSG00000275820.1 MIR6778 chr17 18340814 18340886 - miRNA KNOWN NA 73 73 1 ENSG00000214860.4 EVPLL chr17 18377662 18389647 + protein_coding KNOWN OTTHUMG00000059095.2 11986 2156 14 ENSG00000264177.1 RP1-37N7.1 chr17 18379855 18388984 - antisense NOVEL OTTHUMG00000179473.1 9130 4955 2 ENSG00000267441.1 RP1-37N7.5 chr17 18388871 18389459 + processed_pseudogene KNOWN OTTHUMG00000179891.1 589 589 1 ENSG00000275206.1 RP1-37N7.7 chr17 18390153 18390323 - unprocessed_pseudogene KNOWN OTTHUMG00000187939.1 171 171 1 ENSG00000204471.3 TBC1D3P4 chr17 18393480 18400961 + unprocessed_pseudogene KNOWN OTTHUMG00000059093.1 7482 1075 12 ENSG00000220161.4 FLJ35934 chr17 18411159 18414380 + lincRNA NOVEL OTTHUMG00000179643.1 3222 1871 2 ENSG00000205266.8 KRT17P5 chr17 18415728 18425097 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000059247.2 9370 2989 31 ENSG00000266162.1 YWHAEP2 chr17 18418195 18418306 - processed_pseudogene KNOWN OTTHUMG00000179532.1 112 112 1 ENSG00000228208.5 C1orf143 chr1 218510096 218525978 + lincRNA KNOWN OTTHUMG00000039569.2 15883 1003 5 ENSG00000279999.1 AL353997.3 chr17 18424321 18425097 + processed_transcript PUTATIVE OTTHUMG00000059246.2 777 621 2 ENSG00000186831.10 KRT17P2 chr17 18426861 18431848 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000059248.2 4988 2145 22 ENSG00000214856.10 KRT16P1 chr17 18432051 18442895 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000059249.2 10845 2373 31 ENSG00000229526.2 KRT16P4 chr17 18450244 18475920 + transcribed_processed_pseudogene KNOWN OTTHUMG00000130551.1 25677 755 3 ENSG00000227919.1 AL353997.11 chr17 18452955 18453062 + unprocessed_pseudogene KNOWN OTTHUMG00000130869.1 108 108 1 ENSG00000267492.1 RP1-37N7.6 chr17 18453574 18453739 - processed_pseudogene KNOWN OTTHUMG00000179897.1 166 166 1 ENSG00000230662.1 TNPO1P2 chr17 18460391 18463055 + processed_pseudogene KNOWN OTTHUMG00000059250.1 2665 2665 1 ENSG00000171916.15 LGALS9C chr17 18476737 18494945 + protein_coding KNOWN OTTHUMG00000059251.5 18209 4754 97 ENSG00000167494.8 NOS2P2 chr17 18497572 18501034 - unprocessed_pseudogene KNOWN OTTHUMG00000059253.5 3463 340 3 ENSG00000273018.4 CTD-2303H24.2 chr17 18511221 18551705 - processed_transcript NOVEL OTTHUMG00000059367.13 40485 7703 88 ENSG00000212610.2 U3 chr1 218541690 218541899 - snoRNA NOVEL NA 210 210 1 ENSG00000233327.9 USP32P2 chr17 18511262 18525930 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000186369.10 14669 6442 27 ENSG00000213077.5 FAM106A chr17 18524566 18526846 - protein_coding KNOWN OTTHUMG00000179516.1 2281 2281 1 ENSG00000227689.1 SRP68P2 chr17 18527557 18528461 + processed_pseudogene KNOWN OTTHUMG00000059407.1 905 254 2 ENSG00000154874.13 CCDC144B chr17 18537800 18625617 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000059531.5 87818 9762 65 ENSG00000227077.3 AC107983.4 chr17 18572752 18572961 + processed_pseudogene KNOWN OTTHUMG00000059369.1 210 210 1 ENSG00000276532.1 Metazoa_SRP chr17 18605054 18605356 - misc_RNA NOVEL NA 303 303 1 ENSG00000189375.9 TBC1D28 chr17 18635006 18661950 - protein_coding KNOWN OTTHUMG00000059054.4 26945 3747 49 ENSG00000262262.1 RP11-815I9.3 chr17 18638019 18638370 - transcribed_processed_pseudogene KNOWN OTTHUMG00000178223.1 352 352 1 ENSG00000174977.8 AC026271.5 chr17 18650195 18651542 + processed_pseudogene KNOWN OTTHUMG00000059049.1 1348 1348 1 ENSG00000249459.7 ZNF286B chr17 18658429 18682262 - protein_coding KNOWN OTTHUMG00000178136.5 23834 5884 22 ENSG00000226693.1 NXNP1 chr1 218881600 218882650 - processed_pseudogene KNOWN OTTHUMG00000037140.1 1051 1051 1 ENSG00000264885.1 RP11-815I9.4 chr17 18667629 18669461 - sense_intronic NOVEL OTTHUMG00000179787.1 1833 1833 1 ENSG00000240445.3 FOXO3B chr17 18670946 18672873 - processed_pseudogene KNOWN OTTHUMG00000059047.3 1928 1928 1 ENSG00000224126.2 UBE2SP2 chr17 18677261 18677757 + processed_pseudogene KNOWN OTTHUMG00000059055.2 497 497 1 ENSG00000108448.19 TRIM16L chr17 18697998 18736118 + protein_coding KNOWN OTTHUMG00000059050.9 38121 4329 74 ENSG00000265693.1 RP11-815I9.5 chr17 18704640 18704769 + transcribed_processed_pseudogene KNOWN OTTHUMG00000179788.1 130 130 1 ENSG00000171931.11 FBXW10 chr17 18744024 18779349 + protein_coding KNOWN OTTHUMG00000059048.4 35326 4390 56 ENSG00000171928.12 TVP23B chr17 18780995 18806714 + protein_coding KNOWN OTTHUMG00000059052.5 25720 5862 55 ENSG00000265478.2 CTD-2145A24.5 chr17 18809956 18810940 + lincRNA NOVEL OTTHUMG00000186634.1 985 985 1 ENSG00000250111.3 AC107982.4 chr17 18835707 18842364 + unprocessed_pseudogene KNOWN OTTHUMG00000059405.2 6658 1300 4 ENSG00000141127.13 PRPSAP2 chr17 18840085 18931287 + protein_coding KNOWN OTTHUMG00000059406.5 91203 4734 213 ENSG00000204478.8 PRAMEF20 chr1 13410450 13421328 + protein_coding KNOWN OTTHUMG00000007911.2 10879 1597 7 ENSG00000225561.1 RP11-412H9.2 chr1 218912757 218916184 - lincRNA NOVEL OTTHUMG00000041229.1 3428 390 3 ENSG00000274747.1 Metazoa_SRP chr17 18840618 18840920 + misc_RNA NOVEL NA 303 303 1 ENSG00000264273.1 CTD-2145A24.4 chr17 18859354 18861466 - antisense NOVEL OTTHUMG00000179789.1 2113 463 2 ENSG00000235672.1 AC090286.2 chr17 18908279 18908865 + transcribed_processed_pseudogene KNOWN OTTHUMG00000059404.1 587 587 1 ENSG00000212618.1 snoMBII-202 chr17 18943999 18944073 + snoRNA NOVEL NA 75 75 1 ENSG00000154025.14 SLC5A10 chr17 18950345 19022595 + protein_coding KNOWN OTTHUMG00000178143.2 72251 6451 75 ENSG00000196893.3 AC090286.4 chr17 18951625 18954149 - antisense NOVEL OTTHUMG00000059413.1 2525 1489 2 ENSG00000188522.13 FAM83G chr17 18968789 19004804 - protein_coding KNOWN OTTHUMG00000059411.9 36016 7876 17 ENSG00000263045.1 RP11-28B23.1 chr17 18986148 18986334 - processed_pseudogene KNOWN OTTHUMG00000178225.1 187 187 1 ENSG00000154016.12 GRAP chr17 19020673 19047637 - protein_coding KNOWN OTTHUMG00000059436.4 26965 3107 23 ENSG00000279825.1 CTC-457L16.1 chr17 19030857 19033529 + TEC KNOWN OTTHUMG00000178144.2 2673 2673 1 ENSG00000228063.1 LYPLAL1-AS1 chr1 219086602 219173961 - antisense NOVEL OTTHUMG00000041228.1 87360 724 4 ENSG00000280523.1 SNORD3B-2 chr17 19061912 19062128 + snoRNA KNOWN NA 217 217 1 ENSG00000276271.1 SNORD3B-2 chr17 19061912 19062129 + snoRNA NOVEL NA 218 218 1 ENSG00000265185.4 SNORD3B-1 chr17 19061912 19062669 + snoRNA KNOWN OTTHUMG00000178499.2 758 758 1 ENSG00000262074.5 SNORD3B-2 chr17 19063346 19064136 - snoRNA KNOWN OTTHUMG00000178152.3 791 791 1 ENSG00000274088.1 SNORD3B-1 chr17 19063919 19064136 - snoRNA NOVEL NA 218 218 1 ENSG00000281187.1 SNORD3B-2 chr17 19063920 19064136 - snoRNA KNOWN NA 217 217 1 ENSG00000230197.5 RP11-160E2.17 chr17 19077775 19087878 + lincRNA NOVEL OTTHUMG00000178239.1 10104 699 8 ENSG00000265746.1 KYNUP2 chr17 19082437 19084834 + processed_pseudogene KNOWN OTTHUMG00000178390.1 2398 1329 4 ENSG00000263394.1 RP11-160E2.19 chr17 19091069 19091825 - lincRNA NOVEL OTTHUMG00000178392.2 757 757 1 ENSG00000228157.4 AC007952.5 chr17 19092974 19096837 + processed_transcript NOVEL OTTHUMG00000059428.3 3864 3097 6 ENSG00000143353.10 LYPLAL1 chr1 219173844 219212865 + protein_coding KNOWN OTTHUMG00000037141.2 39022 2966 52 ENSG00000262202.4 RP11-160E2.6 chr17 19112000 19112636 - lincRNA NOVEL OTTHUMG00000178158.2 637 637 1 ENSG00000277947.1 SNORD3D chr17 19112419 19112636 - snoRNA NOVEL NA 218 218 1 ENSG00000281000.1 SNORD3D chr17 19112420 19112636 - snoRNA KNOWN NA 217 217 1 ENSG00000189152.9 GRAPL chr17 19127469 19159176 + protein_coding KNOWN OTTHUMG00000059435.4 31708 2028 16 ENSG00000262319.1 CTC-457L16.2 chr17 19141017 19143689 - antisense NOVEL OTTHUMG00000178159.1 2673 2673 1 ENSG00000266664.1 RP11-160E2.21 chr17 19150279 19151286 + sense_intronic NOVEL OTTHUMG00000179790.1 1008 191 2 ENSG00000197665.7 AC007952.6 chr17 19155727 19159111 - antisense NOVEL OTTHUMG00000059429.4 3385 1452 5 ENSG00000262292.2 RP11-160E2.11 chr17 19160789 19162274 + lincRNA NOVEL OTTHUMG00000178165.2 1486 1486 1 ENSG00000266311.5 AC007952.4 chr17 19164209 19174436 - lincRNA NOVEL OTTHUMG00000178492.1 10228 440 6 ENSG00000261987.2 KYNUP1 chr17 19166896 19169668 - unprocessed_pseudogene KNOWN OTTHUMG00000178493.1 2773 1406 5 ENSG00000225920.2 RIMKLBP2 chr1 219199914 219200567 - processed_pseudogene KNOWN OTTHUMG00000037142.2 654 654 1 ENSG00000263934.3 SNORD3A chr17 19188016 19188714 + snoRNA KNOWN OTTHUMG00000178445.2 699 699 1 ENSG00000281298.1 SNORD3A chr17 19188016 19188232 + snoRNA KNOWN NA 217 217 1 ENSG00000277813.1 SNORD3A chr17 19188016 19188233 + snoRNA NOVEL NA 218 218 1 ENSG00000264940.3 SNORD3C chr17 19189665 19190245 - snoRNA KNOWN OTTHUMG00000178446.1 581 581 1 ENSG00000275303.1 SNORD3C chr17 19190028 19190245 - snoRNA NOVEL NA 218 218 1 ENSG00000280847.1 SNORD3C chr17 19190029 19190245 - snoRNA KNOWN NA 217 217 1 ENSG00000236022.5 RP11-160E2.16 chr17 19203825 19214045 + lincRNA NOVEL OTTHUMG00000178240.1 10221 699 8 ENSG00000263206.1 KYNUP3 chr17 19208584 19211359 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000059430.2 2776 1341 5 ENSG00000072134.14 EPN2 chr17 19215615 19336715 + protein_coding KNOWN OTTHUMG00000187034.1 121101 8517 142 ENSG00000281856.1 RP11-744A16.4 chr17 19219143 19222527 + lincRNA NOVEL OTTHUMG00000189705.1 3385 1452 5 ENSG00000223842.1 RP11-135J2.3 chr1 219222248 219225497 - lincRNA NOVEL OTTHUMG00000037143.1 3250 1126 2 ENSG00000235397.1 EPN2-AS1 chr17 19296596 19306261 - antisense NOVEL OTTHUMG00000130623.1 9666 1190 3 ENSG00000265263.1 RP11-135L13.4 chr17 19334308 19336127 - antisense NOVEL OTTHUMG00000178449.2 1820 1660 2 ENSG00000108641.13 B9D1 chr17 19337554 19378182 - protein_coding KNOWN OTTHUMG00000059586.6 40629 3522 86 ENSG00000221540.1 MIR1180 chr17 19344506 19344574 - miRNA KNOWN NA 69 69 1 ENSG00000166484.18 MAPK7 chr17 19377721 19383544 + protein_coding KNOWN OTTHUMG00000059587.7 5824 5196 72 ENSG00000166482.10 MFAP4 chr17 19383442 19387240 - protein_coding KNOWN OTTHUMG00000059585.6 3799 2152 24 ENSG00000128482.14 RNF112 chr17 19411125 19417276 + protein_coding KNOWN OTTHUMG00000059601.7 6152 3652 27 ENSG00000265126.1 CTB-187M2.2 chr17 19411786 19413118 - antisense NOVEL OTTHUMG00000178829.1 1333 567 2 ENSG00000235979.7 AC004448.5 chr17 19417804 19492991 - lincRNA NOVEL OTTHUMG00000059605.6 75188 4193 30 ENSG00000227078.1 AC004448.2 chr17 19419035 19424357 + lincRNA NOVEL OTTHUMG00000059602.1 5323 520 2 ENSG00000277007.1 RP11-392O17.2 chr1 219270774 219273387 + lincRNA NOVEL OTTHUMG00000186549.1 2614 2614 1 ENSG00000189343.7 RPS2P46 chr17 19445970 19446852 - processed_pseudogene KNOWN OTTHUMG00000178199.1 883 883 1 ENSG00000231477.2 CTB-187M2.1 chr17 19457080 19458399 + lincRNA NOVEL OTTHUMG00000178200.1 1320 543 2 ENSG00000142494.12 SLC47A1 chr17 19495385 19579034 + protein_coding KNOWN OTTHUMG00000059466.6 83650 5719 130 ENSG00000228331.2 RPL17P43 chr17 19496943 19497528 + processed_pseudogene KNOWN OTTHUMG00000059604.2 586 586 1 ENSG00000266079.3 SNORA59B chr17 19557211 19557911 + snoRNA KNOWN OTTHUMG00000178478.1 701 701 1 ENSG00000276660.1 SNORA59A chr17 19557560 19557711 + snoRNA KNOWN NA 152 152 1 ENSG00000262769.1 RP11-1113L8.1 chr17 19560111 19597922 - antisense NOVEL OTTHUMG00000178202.1 37812 730 4 ENSG00000228983.7 AC025627.7 chr17 19579943 19596058 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000130722.3 16116 1281 15 ENSG00000263107.1 RP11-1113L8.2 chr17 19582116 19582275 - processed_pseudogene KNOWN OTTHUMG00000178203.1 160 160 1 ENSG00000266179.2 RP11-1113L8.6 chr17 19600860 19601345 + processed_pseudogene KNOWN OTTHUMG00000178522.3 486 182 2 ENSG00000228536.1 RP11-392O17.1 chr1 219409681 219411941 - lincRNA NOVEL OTTHUMG00000041231.1 2261 811 2 ENSG00000271900.1 RP11-1113L8.7 chr17 19601840 19602256 + processed_pseudogene KNOWN OTTHUMG00000185797.1 417 104 2 ENSG00000227225.1 MTND1P14 chr17 19602259 19603208 + unprocessed_pseudogene KNOWN OTTHUMG00000059467.1 950 950 1 ENSG00000242752.3 NMTRQ-TTG12-1 chr17 19603274 19603345 - processed_pseudogene KNOWN OTTHUMG00000178523.2 72 72 1 ENSG00000228725.3 MTND2P12 chr17 19603797 19605048 + unprocessed_pseudogene KNOWN OTTHUMG00000059468.3 1252 1252 1 ENSG00000276510.1 AC025627.1 chr17 19605264 19605328 + miRNA NOVEL NA 65 65 1 ENSG00000224254.2 AC025627.4 chr17 19605454 19605933 + unprocessed_pseudogene KNOWN OTTHUMG00000059470.2 480 480 1 ENSG00000231625.4 CTD-2104P17.1 chr17 19615789 19633825 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000178204.4 18037 1483 9 ENSG00000072210.17 ALDH3A2 chr17 19648136 19677598 + protein_coding KNOWN OTTHUMG00000059471.6 29463 6457 156 ENSG00000264932.3 CTD-2104P17.2 chr17 19649373 19649935 - antisense NOVEL OTTHUMG00000178516.1 563 563 1 ENSG00000275982.1 Y_RNA chr17 19649494 19649587 - misc_RNA NOVEL NA 94 94 1 ENSG00000230024.1 RP11-95P13.1 chr1 219435152 219442642 - lincRNA NOVEL OTTHUMG00000041230.1 7491 451 3 ENSG00000252349.1 SNORA31 chr17 19662000 19662090 + snoRNA NOVEL NA 91 91 1 ENSG00000180638.16 SLC47A2 chr17 19678288 19718979 - protein_coding KNOWN OTTHUMG00000059464.7 40692 6691 118 ENSG00000262681.2 RP11-311F12.1 chr17 19719059 19722428 + lincRNA NOVEL OTTHUMG00000178220.2 3370 3370 1 ENSG00000264785.1 RP11-311F12.2 chr17 19737682 19738542 + antisense NOVEL OTTHUMG00000178847.1 861 446 2 ENSG00000108602.16 ALDH3A1 chr17 19737984 19748943 - protein_coding KNOWN OTTHUMG00000059469.10 10960 3918 108 ENSG00000230607.3 AC005722.4 chr17 19755244 19756207 + processed_pseudogene KNOWN OTTHUMG00000059510.4 964 964 1 ENSG00000083290.18 ULK2 chr17 19770829 19867936 - protein_coding KNOWN OTTHUMG00000059511.6 97108 9843 100 ENSG00000231096.1 AC015726.1 chr17 19840126 19840515 + processed_pseudogene KNOWN OTTHUMG00000059509.1 390 390 1 ENSG00000279251.1 RP11-78O7.1 chr17 19855747 19856164 + TEC KNOWN OTTHUMG00000178221.2 418 418 1 ENSG00000276406.1 RP11-78O7.3 chr17 19868568 19868689 + lincRNA NOVEL OTTHUMG00000186635.1 122 122 1 ENSG00000238232.1 RP11-95P13.2 chr1 219557192 219557701 + lincRNA NOVEL OTTHUMG00000041227.1 510 182 2 ENSG00000270091.1 RP11-78O7.2 chr17 19896590 19897287 - lincRNA NOVEL OTTHUMG00000184070.1 698 698 3 ENSG00000108599.13 AKAP10 chr17 19904302 19978343 - protein_coding KNOWN OTTHUMG00000059515.7 74042 4848 68 ENSG00000266126.1 RP11-209D14.4 chr17 19929372 19929737 - sense_intronic NOVEL OTTHUMG00000178491.1 366 366 1 ENSG00000261033.1 RP11-209D14.2 chr17 20008051 20009234 - antisense NOVEL OTTHUMG00000175977.2 1184 1184 1 ENSG00000128487.15 SPECC1 chr17 20009344 20319026 + protein_coding KNOWN OTTHUMG00000179808.2 309683 13676 131 ENSG00000225681.2 AC005730.2 chr17 20056287 20056630 + transcribed_processed_pseudogene KNOWN OTTHUMG00000059507.1 344 344 1 ENSG00000225014.1 KCTD9P1 chr17 20111824 20112990 + transcribed_processed_pseudogene KNOWN OTTHUMG00000059512.1 1167 1167 1 ENSG00000212186.1 RNU6-258P chr17 20126388 20126488 - snRNA KNOWN NA 101 101 1 ENSG00000263494.1 AC004702.2 chr17 20185082 20322973 + lincRNA NOVEL OTTHUMG00000178883.2 137892 195 2 ENSG00000252971.1 RNU6-1057P chr17 20290257 20290358 + snRNA KNOWN NA 102 102 1 ENSG00000215817.4 ZC3H11B chr1 219609627 219612062 - processed_pseudogene KNOWN OTTHUMG00000037436.2 2436 2436 1 ENSG00000154898.14 CCDC144CP chr17 20321164 20403557 + transcribed_processed_pseudogene KNOWN OTTHUMG00000059513.3 82394 8145 24 ENSG00000276577.1 U6 chr17 20323001 20323110 + snRNA NOVEL NA 110 110 1 ENSG00000266839.3 RP11-121A13.3 chr17 20323058 20323337 + sense_intronic NOVEL OTTHUMG00000178568.2 280 280 1 ENSG00000278701.1 Metazoa_SRP chr17 20340743 20341045 + misc_RNA NOVEL NA 303 303 1 ENSG00000214832.5 UPF3AP2 chr17 20375369 20376840 - transcribed_processed_pseudogene KNOWN OTTHUMG00000059514.4 1472 1472 3 ENSG00000189423.10 USP32P3 chr17 20415547 20431008 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000179809.2 15462 1943 13 ENSG00000237911.2 SRP68P3 chr17 20415792 20416697 - unprocessed_pseudogene KNOWN OTTHUMG00000130729.3 906 344 2 ENSG00000265556.1 RP11-434D2.2 chr17 20433206 20434285 + lincRNA NOVEL OTTHUMG00000178378.1 1080 301 2 ENSG00000230528.6 NOS2P3 chr17 20436337 20447249 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000130731.3 10913 3643 11 ENSG00000170298.14 LGALS9B chr17 20449395 20467539 - protein_coding KNOWN OTTHUMG00000130730.2 18145 2670 40 ENSG00000162494.5 LRRC38 chr1 13474977 13514048 - protein_coding KNOWN OTTHUMG00000007918.1 39072 2209 2 ENSG00000281745.1 AC096643.1 chr1 219663377 219663467 + miRNA NOVEL NA 91 91 1 ENSG00000229586.2 TNPO1P3 chr17 20481330 20483991 - processed_pseudogene KNOWN OTTHUMG00000178885.1 2662 2662 1 ENSG00000263976.1 YWHAEP3 chr17 20491323 20491443 - processed_pseudogene KNOWN OTTHUMG00000130728.2 121 121 1 ENSG00000230088.1 KRT16P5 chr17 20493634 20494155 - processed_pseudogene KNOWN OTTHUMG00000130721.1 522 522 1 ENSG00000214822.7 KRT16P3 chr17 20501513 20512357 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000130724.3 10845 2351 24 ENSG00000266925.1 RP11-434D2.7 chr17 20507413 20508931 - lincRNA NOVEL OTTHUMG00000178886.1 1519 1519 1 ENSG00000231645.2 KRT17P6 chr17 20512560 20517479 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000130723.3 4920 1553 11 ENSG00000205215.7 KRT17P7 chr17 20519312 20528687 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000130726.2 9376 2625 22 ENSG00000266042.1 AC015818.6 chr17 20526102 20526210 + processed_pseudogene KNOWN OTTHUMG00000130735.3 109 109 1 ENSG00000260907.1 AC008088.4 chr17 20530042 20530881 - lincRNA NOVEL OTTHUMG00000132845.1 840 840 1 ENSG00000265916.1 RP11-434D2.9 chr17 20532248 20532881 - processed_pseudogene KNOWN OTTHUMG00000178887.1 634 634 1 ENSG00000196660.9 SLC30A10 chr1 219685427 219958647 - protein_coding KNOWN OTTHUMG00000037434.3 273221 5770 19 ENSG00000264981.1 RP11-434D2.10 chr17 20542974 20544123 - unprocessed_pseudogene KNOWN OTTHUMG00000178888.1 1150 356 3 ENSG00000235203.2 TBC1D3P3 chr17 20543481 20550963 - unprocessed_pseudogene KNOWN OTTHUMG00000130732.2 7483 1080 12 ENSG00000267075.1 RP11-434D2.3 chr17 20545371 20549952 + lincRNA NOVEL OTTHUMG00000178379.2 4582 4582 1 ENSG00000230339.2 RP11-434D2.8 chr17 20554137 20554380 + processed_pseudogene KNOWN OTTHUMG00000178889.1 244 244 1 ENSG00000263946.1 RP11-434D2.11 chr17 20554971 20559410 - transcribed_processed_pseudogene KNOWN OTTHUMG00000178890.2 4440 739 4 ENSG00000235323.2 COTL1P2 chr17 20564538 20564889 + processed_pseudogene KNOWN OTTHUMG00000130733.2 352 352 1 ENSG00000264422.1 RP11-434D2.12 chr17 20576667 20578748 - lincRNA NOVEL OTTHUMG00000178913.1 2082 353 2 ENSG00000214819.1 CDRT15L2 chr17 20579724 20580911 + protein_coding KNOWN OTTHUMG00000059557.3 1188 1048 2 ENSG00000231258.2 ZSWIM5P2 chr17 20583758 20591180 - unprocessed_pseudogene KNOWN OTTHUMG00000059558.2 7423 2038 3 ENSG00000188013.6 MEIS3P2 chr17 20589293 20590367 + processed_pseudogene KNOWN OTTHUMG00000059559.4 1075 1075 1 ENSG00000252086.1 RNA5SP76 chr1 219761789 219761875 + rRNA KNOWN NA 87 87 1 ENSG00000232889.2 AC087499.4 chr17 20595531 20595708 + processed_pseudogene KNOWN OTTHUMG00000059560.2 178 178 1 ENSG00000226096.1 AC087499.9 chr17 20609462 20609610 - processed_pseudogene KNOWN OTTHUMG00000059565.1 149 149 1 ENSG00000235546.2 AC087499.5 chr17 20612667 20614008 + processed_pseudogene KNOWN OTTHUMG00000059561.2 1342 1342 1 ENSG00000227685.1 AC087499.10 chr17 20612912 20633234 - lincRNA NOVEL OTTHUMG00000059551.1 20323 620 4 ENSG00000266364.1 RP11-218E15.1 chr17 20633034 20633259 - transcribed_processed_pseudogene KNOWN OTTHUMG00000178914.1 226 226 1 ENSG00000236504.2 AC087499.7 chr17 20647287 20681799 + unprocessed_pseudogene KNOWN OTTHUMG00000059563.2 34513 835 6 ENSG00000264874.1 AC087499.8 chr17 20710425 20710533 - processed_pseudogene KNOWN OTTHUMG00000059564.2 109 109 1 ENSG00000226521.6 AC126365.1 chr17 20716481 20737127 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000059552.2 20647 1500 17 ENSG00000187870.7 RNFT1P3 chr17 20743333 20754501 - unprocessed_pseudogene KNOWN OTTHUMG00000059553.2 11169 1052 8 ENSG00000218454.2 HNRNPA1P19 chr17 20771058 20771427 - processed_pseudogene KNOWN OTTHUMG00000059554.2 370 370 1 ENSG00000221673.2 U3 chr1 219962652 219962865 + snoRNA NOVEL NA 214 214 1 ENSG00000213671.3 OLA1P2 chr17 20775642 20776905 + processed_pseudogene KNOWN OTTHUMG00000059555.3 1264 1264 1 ENSG00000226549.3 SCDP1 chr17 20784645 20785725 + processed_pseudogene KNOWN OTTHUMG00000059556.2 1081 1081 1 ENSG00000264215.1 RP11-283C24.1 chr17 20788071 20789584 + lincRNA NOVEL OTTHUMG00000175982.1 1514 1514 1 ENSG00000264662.1 RP11-283C24.2 chr17 20789217 20789595 - processed_pseudogene KNOWN OTTHUMG00000178996.1 379 379 1 ENSG00000226981.2 ABHD17AP6 chr17 20814620 20844257 + unprocessed_pseudogene KNOWN OTTHUMG00000132836.2 29638 1044 4 ENSG00000205212.3 CCDC144NL chr17 20836447 20896140 - protein_coding KNOWN OTTHUMG00000132271.2 59694 3436 12 ENSG00000266369.1 RP11-344E13.4 chr17 20855946 20857317 + antisense NOVEL OTTHUMG00000178997.1 1372 1372 1 ENSG00000233098.7 CCDC144NL-AS1 chr17 20868433 21002276 + antisense NOVEL OTTHUMG00000178937.4 133844 10225 79 ENSG00000252483.1 RNU6-1178P chr17 20894532 20894638 - snRNA KNOWN NA 107 107 1 ENSG00000265790.1 RNASEH1P1 chr17 20901939 20902680 - processed_pseudogene KNOWN OTTHUMG00000178915.1 742 742 1 ENSG00000136628.16 EPRS chr1 219968601 220046658 - protein_coding KNOWN OTTHUMG00000037433.6 78058 5450 75 ENSG00000265099.1 RP11-344E13.1 chr17 20938023 20938344 - processed_pseudogene KNOWN OTTHUMG00000178916.2 322 322 1 ENSG00000244456.2 AC090774.2 chr17 20956682 20958404 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000130761.2 1723 246 2 ENSG00000264660.2 RP11-381P6.1 chr17 20963722 20980238 + antisense NOVEL OTTHUMG00000178938.1 16517 621 2 ENSG00000266009.1 RP11-746M1.2 chr17 20981489 20981654 + transcribed_processed_pseudogene KNOWN OTTHUMG00000178939.1 166 166 1 ENSG00000263729.1 RP11-746M1.8 chr17 20983902 20984046 + processed_pseudogene KNOWN OTTHUMG00000178998.1 145 145 1 ENSG00000124422.10 USP22 chr17 20999593 21043760 - protein_coding KNOWN OTTHUMG00000133621.4 44168 6808 69 ENSG00000263986.1 RP11-746M1.1 chr17 20999747 21000323 + antisense NOVEL OTTHUMG00000178940.1 577 504 2 ENSG00000236819.1 LINC01563 chr17 21075556 21090615 + lincRNA NOVEL OTTHUMG00000130762.1 15060 750 2 ENSG00000109016.16 DHRS7B chr17 21123364 21193265 + protein_coding KNOWN OTTHUMG00000178944.6 69902 5544 42 ENSG00000278176.1 AC087393.1 chr17 21176259 21176347 - miRNA NOVEL NA 89 89 1 ENSG00000162813.16 BPNT1 chr1 220057482 220090462 - protein_coding KNOWN OTTHUMG00000037435.4 32981 3113 80 ENSG00000178307.8 TMEM11 chr17 21197280 21214624 - protein_coding KNOWN OTTHUMG00000178971.3 17345 3309 17 ENSG00000235530.5 AC087294.2 chr17 21214331 21230035 + antisense NOVEL OTTHUMG00000130765.2 15705 1519 5 ENSG00000263815.2 RN7SL426P chr17 21229334 21229628 - misc_RNA KNOWN NA 295 295 1 ENSG00000274180.1 NATD1 chr17 21238870 21253410 - protein_coding KNOWN OTTHUMG00000130764.7 14541 4931 3 ENSG00000266563.1 EIF1P5 chr17 21259968 21260501 - unprocessed_pseudogene KNOWN OTTHUMG00000178972.2 534 234 2 ENSG00000034152.17 MAP2K3 chr17 21284672 21315240 + protein_coding KNOWN OTTHUMG00000134322.5 30569 3783 109 ENSG00000184185.8 KCNJ12 chr17 21376197 21419872 + protein_coding KNOWN OTTHUMG00000132039.3 43676 5617 6 ENSG00000265881.1 PDLIM1P2 chr17 21444833 21445439 - processed_pseudogene KNOWN OTTHUMG00000179030.1 607 607 1 ENSG00000265043.1 RP11-728E14.3 chr17 21456513 21460215 - lincRNA NOVEL OTTHUMG00000175986.2 3703 3703 1 ENSG00000264023.1 RP11-728E14.2 chr17 21457434 21458989 + lincRNA NOVEL OTTHUMG00000179015.1 1556 404 2 ENSG00000067704.9 IARS2 chr1 220094102 220148041 + protein_coding KNOWN OTTHUMG00000037287.3 53940 4165 35 ENSG00000244582.2 RPL21P120 chr17 21504558 21505059 + processed_pseudogene KNOWN OTTHUMG00000157750.3 502 502 1 ENSG00000265265.1 RP11-822E23.7 chr17 21519514 21521269 + lincRNA NOVEL OTTHUMG00000179816.1 1756 396 2 ENSG00000212719.9 C17orf51 chr17 21524790 21574458 - protein_coding KNOWN OTTHUMG00000186498.2 49669 8760 13 ENSG00000272780.4 RP11-822E23.8 chr17 21532477 21574517 - processed_transcript NOVEL OTTHUMG00000132832.4 42041 2994 8 ENSG00000266466.1 RP11-822E23.2 chr17 21532974 21542786 + antisense NOVEL OTTHUMG00000179003.1 9813 965 3 ENSG00000266673.1 RP11-822E23.3 chr17 21552509 21552711 + processed_pseudogene KNOWN OTTHUMG00000179004.1 203 203 1 ENSG00000266050.2 RP11-822E23.6 chr17 21566569 21574517 - transcribed_processed_pseudogene KNOWN OTTHUMG00000179016.1 7949 935 4 ENSG00000264245.1 RP11-822E23.4 chr17 21573770 21574073 + processed_pseudogene KNOWN OTTHUMG00000179017.1 304 304 1 ENSG00000216100.2 AC233702.1 chr17 21577818 21577905 + miRNA NOVEL NA 88 88 1 ENSG00000263375.1 RP11-822E23.5 chr17 21592794 21594180 + processed_pseudogene KNOWN OTTHUMG00000179018.2 1387 1387 1 ENSG00000207590.1 MIR215 chr1 220117853 220117962 - miRNA KNOWN NA 110 110 1 ENSG00000260157.3 CH17-53B9.2 chr17 21614487 21641536 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000175860.1 27050 583 5 ENSG00000264617.1 AC144838.3 chr17 21655843 21657633 - unprocessed_pseudogene KNOWN OTTHUMG00000179021.2 1791 538 2 ENSG00000274748.1 CH17-53B9.4 chr17 21678086 21678418 + unprocessed_pseudogene KNOWN OTTHUMG00000175862.1 333 333 1 ENSG00000260458.3 KCNJ18 chr17 21692523 21704612 + protein_coding KNOWN OTTHUMG00000175863.1 12090 2196 3 ENSG00000265233.1 AC144838.2 chr17 22056587 22056755 - processed_pseudogene KNOWN OTTHUMG00000179020.1 169 169 1 ENSG00000265019.1 NCOR1P2 chr17 22061961 22070538 - unprocessed_pseudogene KNOWN OTTHUMG00000179019.1 8578 294 2 ENSG00000263563.4 UBBP4 chr17 22202995 22205156 + protein_coding KNOWN OTTHUMG00000179059.3 2162 1676 14 ENSG00000263725.1 FTLP13 chr17 22221221 22221605 + processed_pseudogene KNOWN OTTHUMG00000179060.1 385 385 1 ENSG00000263609.1 RP11-1109M24.16 chr17 22234328 22266362 - lincRNA NOVEL OTTHUMG00000179080.2 32035 1675 12 ENSG00000264956.1 RP11-1109M24.5 chr17 22266425 22288133 + lincRNA NOVEL OTTHUMG00000179061.1 21709 2920 4 ENSG00000207624.1 MIR194-1 chr1 220118157 220118241 - miRNA KNOWN NA 85 85 1 ENSG00000266691.1 RP11-1109M24.15 chr17 22277867 22279289 - processed_pseudogene KNOWN OTTHUMG00000179081.1 1423 1423 1 ENSG00000222770.1 AC138761.1 chr17 22295293 22295380 - miRNA NOVEL NA 88 88 1 ENSG00000178130.9 FAM27L chr17 22298691 22299893 + lincRNA KNOWN OTTHUMG00000166302.2 1203 693 4 ENSG00000264811.1 RP11-1109M24.14 chr17 22299134 22299467 - processed_pseudogene KNOWN OTTHUMG00000179082.1 334 334 1 ENSG00000265567.1 RP11-1109M24.13 chr17 22301333 22301657 - processed_pseudogene KNOWN OTTHUMG00000179083.1 325 325 1 ENSG00000264562.1 RP11-1109M24.12 chr17 22305671 22306013 - processed_pseudogene KNOWN OTTHUMG00000179084.1 343 343 1 ENSG00000266806.1 RP11-744K17.3 chr17 22331597 22332410 + unprocessed_pseudogene KNOWN OTTHUMG00000179063.1 814 229 2 ENSG00000276399.1 FLJ36000 chr17 22406019 22413744 + lincRNA NOVEL OTTHUMG00000180381.3 7726 3801 2 ENSG00000266746.1 RP11-1109M24.7 chr17 22411893 22412229 - processed_pseudogene KNOWN OTTHUMG00000179088.1 337 337 1 ENSG00000261020.1 RP11-744K17.1 chr17 22420022 22424731 + lincRNA NOVEL OTTHUMG00000175987.1 4710 4710 1 ENSG00000232134.1 RPS15AP12 chr1 220143964 220144351 - processed_pseudogene KNOWN OTTHUMG00000037437.1 388 388 1 ENSG00000264543.1 RP11-744K17.7 chr17 22435176 22435392 - processed_pseudogene KNOWN OTTHUMG00000179089.1 217 217 1 ENSG00000266885.1 RP11-744K17.2 chr17 22435390 22439033 + lincRNA NOVEL OTTHUMG00000175988.1 3644 3644 1 ENSG00000265705.1 RP11-744K17.8 chr17 22435629 22436064 + transcribed_processed_pseudogene KNOWN OTTHUMG00000179822.1 436 436 1 ENSG00000266529.1 RP11-846F4.1 chr17 22519617 22520709 + processed_pseudogene KNOWN OTTHUMG00000179067.1 1093 1093 1 ENSG00000256618.2 MTRNR2L1 chr17 22523111 22524663 + protein_coding KNOWN OTTHUMG00000179068.2 1553 1553 1 ENSG00000243655.2 RP11-846F4.12 chr17 22524563 22525330 - antisense NOVEL OTTHUMG00000179091.1 768 504 2 ENSG00000264168.1 MTND1P15 chr17 22524738 22525696 + transcribed_processed_pseudogene KNOWN OTTHUMG00000179069.3 959 959 2 ENSG00000263914.1 RP11-846F4.5 chr17 22525899 22526937 + processed_pseudogene KNOWN OTTHUMG00000179070.1 1039 1039 1 ENSG00000273754.1 AC132825.1 chr17 22527150 22527213 + miRNA NOVEL NA 64 64 1 ENSG00000240103.2 RP11-846F4.6 chr17 22527324 22529570 + processed_pseudogene KNOWN OTTHUMG00000179071.3 2247 2247 1 ENSG00000259961.1 RP4-597A16.2 chr1 13513220 13516270 + antisense NOVEL OTTHUMG00000007920.1 3051 477 3 ENSG00000118873.14 RAB3GAP2 chr1 220148293 220272454 - protein_coding KNOWN OTTHUMG00000037139.5 124162 10344 74 ENSG00000241225.2 NMTRS-TGA3-1 chr17 22528853 22528921 - unprocessed_pseudogene KNOWN OTTHUMG00000179090.2 69 69 1 ENSG00000263483.1 MTATP6P3 chr17 22529934 22530609 + processed_pseudogene KNOWN OTTHUMG00000179092.2 676 676 1 ENSG00000264316.1 RP11-846F4.9 chr17 22530612 22531392 + processed_pseudogene KNOWN OTTHUMG00000179093.1 781 781 1 ENSG00000275480.1 RP11-846F4.14 chr17 22567423 22568713 - unprocessed_pseudogene KNOWN OTTHUMG00000187940.1 1291 248 2 ENSG00000264930.1 RP11-846F4.10 chr17 22606388 22606703 + processed_pseudogene KNOWN OTTHUMG00000179094.1 316 316 1 ENSG00000264262.1 RP11-285M22.3 chr17 22676695 22692618 - lincRNA NOVEL OTTHUMG00000179095.1 15924 254 2 ENSG00000265114.1 RP11-285M22.1 chr17 22692834 22693613 + lincRNA NOVEL OTTHUMG00000179096.1 780 398 2 ENSG00000264431.1 RP11-285M22.2 chr17 22693325 22694831 - processed_pseudogene KNOWN OTTHUMG00000179097.2 1507 1507 1 ENSG00000264970.1 RP11-846F4.11 chr17 22704415 22705685 + processed_pseudogene KNOWN OTTHUMG00000179098.1 1271 1271 1 ENSG00000263433.1 RP11-260A9.1 chr17 26981694 26982090 + processed_pseudogene KNOWN OTTHUMG00000179149.1 397 397 1 ENSG00000281696.1 MIR664A chr1 220200538 220200619 - miRNA KNOWN NA 82 82 1 ENSG00000264734.1 RP11-260A9.6 chr17 26989189 26999941 - lincRNA NOVEL OTTHUMG00000179164.1 10753 720 5 ENSG00000264172.1 PDLIM1P3 chr17 27002661 27003259 - processed_pseudogene KNOWN OTTHUMG00000179165.1 599 599 1 ENSG00000266736.1 RP11-260A9.4 chr17 27019527 27047934 - unprocessed_pseudogene KNOWN OTTHUMG00000179166.1 28408 541 5 ENSG00000264837.1 VN1R71P chr17 27057399 27058221 + processed_pseudogene KNOWN OTTHUMG00000179150.1 823 823 1 ENSG00000265646.2 TUFMP1 chr17 27082690 27084036 - processed_pseudogene KNOWN OTTHUMG00000179167.1 1347 1347 1 ENSG00000265246.1 RP11-663N22.1 chr17 27237859 27241661 - lincRNA NOVEL OTTHUMG00000179151.2 3803 614 2 ENSG00000277627.2 AC026254.1 chr17 27255416 27255516 + miRNA NOVEL NA 101 101 1 ENSG00000239223.3 RPL34P31 chr17 27274107 27274477 + processed_pseudogene KNOWN OTTHUMG00000157754.1 371 371 1 ENSG00000213664.4 RPS16P8 chr17 27280482 27280912 + processed_pseudogene KNOWN OTTHUMG00000157757.1 431 431 1 ENSG00000265453.1 RP11-173M1.3 chr17 27281094 27281415 + processed_pseudogene KNOWN OTTHUMG00000179152.1 322 322 1 ENSG00000222370.1 SNORA36B chr1 220200546 220200676 - snoRNA KNOWN NA 131 131 1 ENSG00000263583.1 MIR4522 chr17 27293910 27293996 - miRNA KNOWN NA 87 87 1 ENSG00000109046.13 WSB1 chr17 27294076 27315926 + protein_coding KNOWN OTTHUMG00000132293.5 21851 8602 77 ENSG00000266313.1 RP11-173M1.4 chr17 27333256 27348491 + lincRNA NOVEL OTTHUMG00000179153.1 15236 454 3 ENSG00000265683.1 RP11-173M1.5 chr17 27351858 27352584 - processed_pseudogene KNOWN OTTHUMG00000179154.1 727 727 1 ENSG00000266356.1 RP11-578C11.2 chr17 27411438 27412806 - unprocessed_pseudogene KNOWN OTTHUMG00000179155.1 1369 154 3 ENSG00000266433.5 TBC1D3P5 chr17 27417690 27431623 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000179156.2 13934 4659 32 ENSG00000141068.12 KSR1 chr17 27456714 27626438 + protein_coding KNOWN OTTHUMG00000132051.10 169725 11750 143 ENSG00000265801.1 RP11-720N19.2 chr17 27465112 27465541 + sense_intronic NOVEL OTTHUMG00000179195.1 430 430 1 ENSG00000263368.1 RP11-720N19.1 chr17 27526386 27527223 - processed_pseudogene KNOWN OTTHUMG00000179157.1 838 838 1 ENSG00000266853.1 ITM2BP1 chr17 27612588 27613251 - processed_pseudogene KNOWN OTTHUMG00000179257.1 664 664 1 ENSG00000270585.1 RP11-568G11.4 chr1 220207618 220208282 + processed_pseudogene KNOWN OTTHUMG00000184471.1 665 665 1 ENSG00000266728.4 AC015688.3 chr17 27623364 27640777 + protein_coding NOVEL OTTHUMG00000132437.16 17414 730 6 ENSG00000266872.1 RP11-19P22.8 chr17 27625484 27626438 - antisense NOVEL OTTHUMG00000179258.1 955 656 2 ENSG00000168961.15 LGALS9 chr17 27629798 27649560 + protein_coding KNOWN OTTHUMG00000179831.11 19763 5714 102 ENSG00000264216.1 NOS2P1 chr17 27651334 27665712 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000179197.2 14379 1647 14 ENSG00000265788.1 RP11-19P22.5 chr17 27661549 27663658 - lincRNA NOVEL OTTHUMG00000179198.1 2110 2110 1 ENSG00000265041.1 RP11-19P22.7 chr17 27666749 27672803 - unprocessed_pseudogene KNOWN OTTHUMG00000179199.3 6055 942 9 ENSG00000266771.1 RP11-19P22.10 chr17 27675894 27675997 - processed_pseudogene KNOWN OTTHUMG00000179259.1 104 104 1 ENSG00000264240.1 RP11-19P22.6 chr17 27677805 27678087 - processed_pseudogene KNOWN OTTHUMG00000179200.1 283 283 1 ENSG00000264689.1 RP11-19P22.2 chr17 27682476 27682737 + processed_pseudogene KNOWN OTTHUMG00000179201.1 262 262 1 ENSG00000263604.1 RP11-19P22.3 chr17 27683946 27684144 - processed_pseudogene KNOWN OTTHUMG00000179202.1 199 199 1 ENSG00000270708.1 RP11-568G11.5 chr1 220220291 220220593 + processed_pseudogene KNOWN OTTHUMG00000184472.2 303 303 1 ENSG00000265833.1 RP1-66C13.1 chr17 27707178 27707250 + processed_pseudogene KNOWN OTTHUMG00000179203.1 73 73 1 ENSG00000266416.1 RP1-66C13.2 chr17 27708111 27708138 + processed_pseudogene KNOWN OTTHUMG00000179204.1 28 28 1 ENSG00000266786.1 LGALS9DP chr17 27746132 27754954 + unprocessed_pseudogene KNOWN OTTHUMG00000179205.1 8823 764 8 ENSG00000007171.15 NOS2 chr17 27756766 27800499 - protein_coding KNOWN OTTHUMG00000132445.1 43734 4176 54 ENSG00000266202.1 RP1-66C13.4 chr17 27798806 27893365 - protein_coding PUTATIVE OTTHUMG00000179275.1 94560 582 5 ENSG00000266527.1 RP11-138P22.1 chr17 27874645 27881237 + antisense NOVEL OTTHUMG00000179206.1 6593 2266 2 ENSG00000232859.8 LYRM9 chr17 27878314 27894752 - protein_coding KNOWN OTTHUMG00000132829.8 16439 5380 23 ENSG00000260019.1 RP11-218F4.1 chr17 27929548 27974223 - lincRNA NOVEL OTTHUMG00000175990.1 44676 1340 4 ENSG00000251818.1 SCARNA20 chr17 28018770 28018907 + scaRNA NOVEL NA 138 138 1 ENSG00000266190.1 RP11-218F4.2 chr17 28021668 28022265 - unprocessed_pseudogene KNOWN OTTHUMG00000179207.1 598 291 2 ENSG00000218283.2 MORF4L1P1 chr1 220253570 220254536 + processed_pseudogene KNOWN OTTHUMG00000037285.1 967 967 1 ENSG00000202389.1 SNORA70 chr17 28022330 28022464 - snoRNA NOVEL NA 135 135 1 ENSG00000087095.11 NLK chr17 28041737 28196381 + protein_coding KNOWN OTTHUMG00000132451.8 154645 5290 35 ENSG00000252283.1 Vault chr17 28061967 28062068 + misc_RNA NOVEL NA 102 102 1 ENSG00000240873.1 RPS29P22 chr17 28116239 28116406 - processed_pseudogene KNOWN OTTHUMG00000157761.1 168 168 1 ENSG00000267644.1 CTD-2008P7.10 chr17 28219285 28220005 + lincRNA NOVEL OTTHUMG00000179437.1 721 721 1 ENSG00000237575.4 PYY2 chr17 28226563 28228065 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000132450.2 1503 1076 4 ENSG00000267259.1 CTD-2008P7.9 chr17 28232590 28235281 - lincRNA NOVEL OTTHUMG00000179417.1 2692 2692 1 ENSG00000266830.1 CTD-2008P7.8 chr17 28246454 28248006 - lincRNA NOVEL OTTHUMG00000179418.1 1553 1553 1 ENSG00000265060.1 PPY2 chr17 28247444 28248289 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000179302.1 846 846 4 ENSG00000263788.1 CTD-2008P7.7 chr17 28256375 28256669 - processed_pseudogene KNOWN OTTHUMG00000179419.1 295 295 1 ENSG00000213033.4 AURKAPS1 chr1 220266706 220267917 - transcribed_processed_pseudogene KNOWN OTTHUMG00000037286.2 1212 1212 1 ENSG00000264486.1 CTD-2008P7.3 chr17 28256438 28265551 + lincRNA NOVEL OTTHUMG00000179303.1 9114 776 2 ENSG00000260777.1 CTD-2008P7.1 chr17 28263634 28266369 - lincRNA NOVEL OTTHUMG00000175995.1 2736 2736 1 ENSG00000266306.1 CTD-2008P7.6 chr17 28269203 28272365 - unprocessed_pseudogene KNOWN OTTHUMG00000179420.1 3163 1441 3 ENSG00000264029.1 CTD-2008P7.5 chr17 28274657 28275716 - unprocessed_pseudogene KNOWN OTTHUMG00000179421.1 1060 244 2 ENSG00000265480.4 KRT18P55 chr17 28275986 28317783 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000179422.3 41798 2086 10 ENSG00000207844.1 AC061975.1 chr17 28276463 28276553 - miRNA NOVEL NA 91 91 1 ENSG00000109084.12 TMEM97 chr17 28319095 28328685 + protein_coding KNOWN OTTHUMG00000132497.5 9591 3034 15 ENSG00000109083.12 IFT20 chr17 28328325 28335489 - protein_coding KNOWN OTTHUMG00000179412.4 7165 3227 68 ENSG00000109079.8 TNFAIP1 chr17 28335602 28347009 + protein_coding KNOWN OTTHUMG00000132501.3 11408 3889 28 ENSG00000004142.10 POLDIP2 chr17 28347177 28357522 - protein_coding KNOWN OTTHUMG00000132065.8 10346 2121 22 ENSG00000230318.2 XRCC6P3 chr1 220313945 220315565 - processed_pseudogene KNOWN OTTHUMG00000037093.2 1621 1621 1 ENSG00000244045.9 TMEM199 chr17 28357581 28363683 + protein_coding KNOWN OTTHUMG00000132498.8 6103 4620 40 ENSG00000258924.4 CTB-96E2.3 chr17 28357647 28381697 + processed_transcript NOVEL OTTHUMG00000171814.3 24051 1050 6 ENSG00000264302.1 MIR4723 chr17 28360654 28360734 + miRNA KNOWN NA 81 81 1 ENSG00000265618.1 CTB-96E2.7 chr17 28361601 28362859 - antisense NOVEL OTTHUMG00000179413.1 1259 1121 2 ENSG00000274529.3 SEBOX chr17 28364268 28365244 - protein_coding KNOWN OTTHUMG00000171160.46 977 666 7 ENSG00000273171.1 CTB-96E2.2 chr17 28364288 28368012 - protein_coding PUTATIVE OTTHUMG00000171457.3 3725 851 4 ENSG00000004139.12 SARM1 chr17 28364356 28404049 + protein_coding KNOWN OTTHUMG00000132499.46 39694 11137 46 ENSG00000109072.12 VTN chr17 28367276 28373091 - protein_coding KNOWN OTTHUMG00000132500.5 5816 2427 14 ENSG00000277450.1 CTB-96E2.10 chr17 28373256 28373562 + sense_intronic NOVEL OTTHUMG00000189104.1 307 307 1 ENSG00000279532.1 CTB-96E2.6 chr17 28373673 28374301 - TEC KNOWN OTTHUMG00000179414.1 629 629 1 ENSG00000232883.1 RP11-302I18.1 chr1 220316667 220317599 - processed_pseudogene KNOWN OTTHUMG00000037092.1 933 933 1 ENSG00000076351.11 SLC46A1 chr17 28394756 28407197 - protein_coding KNOWN OTTHUMG00000179415.4 12442 7838 25 ENSG00000265254.1 CTD-2350C19.2 chr17 28405240 28406796 + antisense NOVEL OTTHUMG00000179305.1 1557 493 2 ENSG00000265541.1 H3F3BP2 chr17 28416922 28417492 + unprocessed_pseudogene KNOWN OTTHUMG00000179306.1 571 357 2 ENSG00000263870.1 CTD-2350C19.5 chr17 28444063 28445563 - unprocessed_pseudogene KNOWN OTTHUMG00000179416.1 1501 510 3 ENSG00000258472.7 RP11-192H23.4 chr17 28455752 28614197 - protein_coding KNOWN OTTHUMG00000171061.30 158446 3218 27 ENSG00000263266.2 RPS7P1 chr17 28467822 28468406 + processed_pseudogene KNOWN OTTHUMG00000132828.1 585 585 1 ENSG00000007216.13 SLC13A2 chr17 28473293 28497781 + protein_coding KNOWN OTTHUMG00000132523.2 24489 3226 77 ENSG00000109101.6 FOXN1 chr17 28506243 28538896 + protein_coding KNOWN OTTHUMG00000132603.2 32654 3637 20 ENSG00000109103.10 UNC119 chr17 28546707 28552668 - protein_coding KNOWN OTTHUMG00000132606.5 5962 5128 27 ENSG00000087111.19 PIGS chr17 28553383 28571872 - protein_coding KNOWN OTTHUMG00000132604.6 18490 5990 79 ENSG00000226927.1 RP11-302I18.3 chr1 220359731 220360183 - lincRNA NOVEL OTTHUMG00000037358.2 453 245 2 ENSG00000109107.12 ALDOC chr17 28573115 28577264 - protein_coding KNOWN OTTHUMG00000132605.6 4150 2928 54 ENSG00000265168.1 RP11-192H23.5 chr17 28573117 28574243 + antisense NOVEL OTTHUMG00000179308.1 1127 298 2 ENSG00000076382.15 SPAG5 chr17 28577565 28599279 - protein_coding KNOWN OTTHUMG00000166586.25 21715 5472 94 ENSG00000227543.4 SPAG5-AS1 chr17 28598790 28617377 + processed_transcript KNOWN OTTHUMG00000132827.4 18588 3835 12 ENSG00000264608.1 RP11-192H23.8 chr17 28601827 28602284 - sense_intronic NOVEL OTTHUMG00000179341.2 458 458 1 ENSG00000265287.2 RP11-192H23.6 chr17 28607963 28609730 + antisense NOVEL OTTHUMG00000179343.2 1768 1083 2 ENSG00000167524.13 SGK494 chr17 28607964 28614200 - protein_coding KNOWN OTTHUMG00000179342.29 6237 4663 64 ENSG00000007202.13 KIAA0100 chr17 28614440 28645454 - protein_coding KNOWN OTTHUMG00000166587.5 31015 9235 180 ENSG00000264044.1 RP11-192H23.7 chr17 28633206 28635950 + antisense NOVEL OTTHUMG00000179344.1 2745 1515 6 ENSG00000132581.8 SDF2 chr17 28648356 28662189 - protein_coding KNOWN OTTHUMG00000132681.5 13834 3332 29 ENSG00000215909.3 RP4-597A16.3 chr1 13555001 13555694 + processed_pseudogene KNOWN OTTHUMG00000007922.1 694 371 2 ENSG00000260505.1 RP11-410C4.5 chr1 220401122 220404033 + lincRNA NOVEL OTTHUMG00000176320.1 2912 2912 1 ENSG00000240494.2 RPS12P28 chr17 28655557 28655983 + processed_pseudogene KNOWN OTTHUMG00000157763.2 427 427 1 ENSG00000109111.13 SUPT6H chr17 28662091 28702684 + protein_coding KNOWN OTTHUMG00000179449.5 40594 10620 104 ENSG00000265205.1 AC010761.13 chr17 28670054 28672804 - antisense NOVEL OTTHUMG00000179492.1 2751 499 2 ENSG00000167525.12 PROCA1 chr17 28703197 28711854 - protein_coding KNOWN OTTHUMG00000132682.4 8658 4829 39 ENSG00000109113.16 RAB34 chr17 28714281 28718429 - protein_coding KNOWN OTTHUMG00000132680.9 4149 3328 172 ENSG00000198242.12 RPL23A chr17 28719393 28724359 + protein_coding KNOWN OTTHUMG00000132684.5 4967 2824 37 ENSG00000238423.1 SNORD42B chr17 28720550 28720616 + snoRNA KNOWN NA 67 67 1 ENSG00000264577.1 AC010761.8 chr17 28721487 28722877 - antisense NOVEL OTTHUMG00000179455.1 1391 899 2 ENSG00000238578.1 SNORD4A chr17 28722582 28722653 + snoRNA KNOWN NA 72 72 1 ENSG00000238649.1 SNORD42A chr17 28723429 28723492 + snoRNA KNOWN NA 64 64 1 ENSG00000235163.2 RP11-410C4.1 chr1 220448516 220448853 + processed_pseudogene KNOWN OTTHUMG00000037362.2 338 338 1 ENSG00000238597.1 SNORD4B chr17 28723682 28723753 + snoRNA KNOWN NA 72 72 1 ENSG00000160606.9 TLCD1 chr17 28724348 28727935 - protein_coding KNOWN OTTHUMG00000132683.3 3588 1311 14 ENSG00000160602.12 NEK8 chr17 28725897 28743455 + protein_coding KNOWN OTTHUMG00000179454.27 17559 4420 48 ENSG00000267729.1 AC010761.14 chr17 28727258 28727739 + antisense NOVEL OTTHUMG00000179845.1 482 197 2 ENSG00000265073.1 AC010761.6 chr17 28732963 28743102 - antisense NOVEL OTTHUMG00000179453.28 10140 754 4 ENSG00000076604.13 TRAF4 chr17 28743984 28750958 + protein_coding KNOWN OTTHUMG00000132677.6 6975 4596 75 ENSG00000265474.1 AC010761.9 chr17 28745569 28747652 - antisense NOVEL OTTHUMG00000179457.1 2084 521 2 ENSG00000265840.1 AC010761.10 chr17 28749731 28750079 - antisense NOVEL OTTHUMG00000179493.1 349 287 2 ENSG00000173065.12 FAM222B chr17 28755978 28855232 - protein_coding KNOWN OTTHUMG00000179495.3 99255 5514 55 ENSG00000243053.2 RPL31P58 chr17 28802444 28802822 + processed_pseudogene KNOWN OTTHUMG00000157764.2 379 379 1 ENSG00000234863.1 RP11-410C4.2 chr1 220455154 220455312 - processed_pseudogene KNOWN OTTHUMG00000037363.1 159 159 1 ENSG00000238516.1 Y_RNA chr17 28834722 28834822 + misc_RNA NOVEL NA 101 101 1 ENSG00000264138.1 RP11-20B24.3 chr17 28848860 28849592 + unprocessed_pseudogene KNOWN OTTHUMG00000179496.1 733 417 2 ENSG00000132591.10 ERAL1 chr17 28854938 28861067 + protein_coding KNOWN OTTHUMG00000132675.4 6130 2318 51 ENSG00000264066.4 RP11-20B24.2 chr17 28861072 28861966 - lincRNA NOVEL OTTHUMG00000179497.3 895 895 1 ENSG00000273915.1 MIR451A chr17 28861369 28861440 - miRNA KNOWN NA 72 72 1 ENSG00000277441.1 AC024267.1 chr17 28861514 28861624 - miRNA NOVEL NA 111 111 1 ENSG00000278521.1 MIR4732 chr17 28861655 28861730 - miRNA KNOWN NA 76 76 1 ENSG00000132589.14 FLOT2 chr17 28879335 28897679 - protein_coding KNOWN OTTHUMG00000132674.5 18345 3336 90 ENSG00000264304.1 RP11-20B24.7 chr17 28892469 28893342 + antisense NOVEL OTTHUMG00000179512.1 874 562 2 ENSG00000266642.2 RP11-20B24.4 chr17 28897738 28899402 + antisense NOVEL OTTHUMG00000179498.3 1665 1264 4 ENSG00000226226.1 SLMO2P1 chr1 220467954 220468808 + processed_pseudogene KNOWN OTTHUMG00000037349.1 855 540 2 ENSG00000167536.12 DHRS13 chr17 28897781 28903071 - protein_coding KNOWN OTTHUMG00000132678.2 5291 2944 16 ENSG00000109118.12 PHF12 chr17 28905250 28951771 - protein_coding KNOWN OTTHUMG00000132676.5 46522 12227 114 ENSG00000265845.2 RP11-20B24.5 chr17 28926275 28944749 + antisense NOVEL OTTHUMG00000179499.2 18475 996 6 ENSG00000265908.1 RP11-20B24.6 chr17 28944796 28945394 + antisense NOVEL OTTHUMG00000179500.1 599 599 1 ENSG00000179761.10 PIPOX chr17 28950513 29057220 + protein_coding KNOWN OTTHUMG00000132679.4 106708 4059 62 ENSG00000063015.18 SEZ6 chr17 28954901 29006440 - protein_coding KNOWN OTTHUMG00000168010.4 51540 5115 110 ENSG00000263613.1 RP11-321A17.5 chr17 29009799 29011009 - antisense NOVEL OTTHUMG00000179546.1 1211 517 3 ENSG00000238007.1 AC024619.2 chr17 29012865 29016512 + sense_intronic NOVEL OTTHUMG00000132826.1 3648 556 4 ENSG00000263781.3 RP11-321A17.3 chr17 29021325 29021640 - processed_pseudogene KNOWN OTTHUMG00000179539.1 316 316 1 ENSG00000276995.1 RP11-321A17.6 chr17 29071124 29071594 - lincRNA NOVEL OTTHUMG00000186637.1 471 471 1 ENSG00000231529.1 RP11-410C4.4 chr1 220485104 220487043 - lincRNA NOVEL OTTHUMG00000037350.1 1940 390 2 ENSG00000196535.13 MYO18A chr17 29073517 29180412 - protein_coding KNOWN OTTHUMG00000166360.8 106896 10752 288 ENSG00000221995.5 TIAF1 chr17 29073521 29078857 - protein_coding KNOWN OTTHUMG00000163268.2 5337 5337 1 ENSG00000263709.1 RP11-321A17.4 chr17 29140483 29155489 + antisense NOVEL OTTHUMG00000179540.1 15007 323 2 ENSG00000264050.1 RP11-22N12.2 chr17 29197071 29197785 - processed_pseudogene KNOWN OTTHUMG00000179541.1 715 715 1 ENSG00000178082.6 TWF1P1 chr17 29203426 29204474 - processed_pseudogene KNOWN OTTHUMG00000179542.1 1049 1049 1 ENSG00000108255.6 CRYBA1 chr17 29246863 29254494 + protein_coding KNOWN OTTHUMG00000132729.2 7632 794 11 ENSG00000108256.7 NUFIP2 chr17 29255836 29294118 - protein_coding KNOWN OTTHUMG00000179547.2 38283 10850 7 ENSG00000277347.1 AC005412.1 chr17 29301154 29301228 + miRNA NOVEL NA 75 75 1 ENSG00000239256.1 RPL35AP35 chr17 29340482 29340822 - processed_pseudogene KNOWN OTTHUMG00000157776.1 341 341 1 ENSG00000266111.2 RP11-296K13.4 chr17 29352069 29404105 + lincRNA NOVEL OTTHUMG00000179549.3 52037 419 2 ENSG00000116141.14 MARK1 chr1 220528183 220664461 + protein_coding KNOWN OTTHUMG00000037351.2 136279 5417 72 ENSG00000264808.1 RP11-802D6.1 chr17 29369717 29390777 - antisense NOVEL OTTHUMG00000179717.1 21061 762 2 ENSG00000222363.1 RNU4-34P chr17 29388560 29388683 + snRNA KNOWN NA 124 124 1 ENSG00000160551.8 TAOK1 chr17 29390464 29551904 + protein_coding KNOWN OTTHUMG00000179718.2 161441 16980 56 ENSG00000263719.1 MIR4523 chr17 29390662 29390730 + miRNA KNOWN NA 69 69 1 ENSG00000253064.1 RNU6-711P chr17 29424762 29424867 - snRNA KNOWN NA 106 106 1 ENSG00000202205.1 RNU6-1034P chr17 29445300 29445400 - snRNA KNOWN NA 101 101 1 ENSG00000264031.1 ABHD15-AS1 chr17 29560547 29707090 + antisense NOVEL OTTHUMG00000179722.1 146544 187 2 ENSG00000168792.4 ABHD15 chr17 29560547 29567137 - protein_coding KNOWN OTTHUMG00000179721.2 6591 3592 2 ENSG00000167543.14 TP53I13 chr17 29566052 29573157 + protein_coding KNOWN OTTHUMG00000179723.3 7106 4570 52 ENSG00000264290.1 RP11-68I3.4 chr17 29569580 29570519 + sense_intronic NOVEL OTTHUMG00000179724.1 940 465 2 ENSG00000243872.3 RN7SL464P chr1 220571739 220572035 - misc_RNA KNOWN NA 297 297 1 ENSG00000108262.14 GIT1 chr17 29573469 29594054 - protein_coding KNOWN OTTHUMG00000132730.4 20586 5635 145 ENSG00000198720.11 ANKRD13B chr17 29589769 29614761 + protein_coding KNOWN OTTHUMG00000132731.6 24993 3971 92 ENSG00000264647.1 RP11-68I3.7 chr17 29591703 29592241 - antisense NOVEL OTTHUMG00000179725.1 539 278 2 ENSG00000167549.17 CORO6 chr17 29614756 29622907 - protein_coding KNOWN OTTHUMG00000132732.3 8152 4321 90 ENSG00000264007.1 RP11-68I3.10 chr17 29621617 29622254 - sense_intronic NOVEL OTTHUMG00000179726.1 638 638 1 ENSG00000141298.16 SSH2 chr17 29625938 29930276 - protein_coding KNOWN OTTHUMG00000132752.5 304339 12608 84 ENSG00000263370.1 RP11-68I3.5 chr17 29639627 29640825 + antisense NOVEL OTTHUMG00000179727.1 1199 270 2 ENSG00000222858.1 RNU6-920P chr17 29641611 29641702 - snRNA KNOWN NA 92 92 1 ENSG00000265625.1 RP11-68I3.11 chr17 29644796 29645847 - sense_intronic NOVEL OTTHUMG00000179736.1 1052 1052 1 ENSG00000240531.1 RPL21P123 chr17 29716279 29716685 - transcribed_processed_pseudogene KNOWN OTTHUMG00000157780.1 407 407 1 ENSG00000281158.1 AC096640.1 chr1 220571834 220571899 - miRNA NOVEL NA 66 66 1 ENSG00000263657.1 RP11-82O19.1 chr17 29761103 29787836 + antisense NOVEL OTTHUMG00000179728.1 26734 576 3 ENSG00000265713.1 RP11-82O19.2 chr17 29775747 29776701 - transcribed_processed_pseudogene KNOWN OTTHUMG00000179737.1 955 955 1 ENSG00000252657.1 SNORA70 chr17 29777619 29777744 + snoRNA NOVEL NA 126 126 1 ENSG00000240074.1 RPL9P30 chr17 29855759 29856332 + processed_pseudogene KNOWN OTTHUMG00000157781.1 574 574 1 ENSG00000263477.1 RP11-338L22.2 chr17 29863402 29866092 + antisense NOVEL OTTHUMG00000179738.1 2691 893 2 ENSG00000239129.1 snoU13 chr17 29883006 29883109 + snoRNA NOVEL NA 104 104 1 ENSG00000176927.13 EFCAB5 chr17 29929200 30108452 + protein_coding KNOWN OTTHUMG00000179743.2 179253 6928 123 ENSG00000264435.1 RP11-338L22.3 chr17 29972514 29973027 + transcribed_processed_pseudogene KNOWN OTTHUMG00000179744.1 514 514 1 ENSG00000264715.1 AC104996.1 chr17 30012033 30012118 + miRNA NOVEL NA 86 86 1 ENSG00000207011.1 RNY4P13 chr17 30059052 30059147 - misc_RNA KNOWN NA 96 96 1 ENSG00000233012.2 HDAC1P2 chr1 220625740 220628056 + transcribed_processed_pseudogene KNOWN OTTHUMG00000037360.2 2317 2006 3 ENSG00000267482.1 RNY4P13 chr17 30059054 30059147 - unprocessed_pseudogene KNOWN OTTHUMG00000179920.1 94 94 1 ENSG00000265289.1 AC104984.4 chr17 30059339 30065677 - antisense NOVEL OTTHUMG00000132753.5 6339 591 2 ENSG00000266876.1 RP11-1148O4.1 chr17 30068632 30069631 + transcribed_processed_pseudogene KNOWN OTTHUMG00000179745.1 1000 1000 1 ENSG00000265394.1 RP11-1148O4.2 chr17 30090366 30117497 - antisense NOVEL OTTHUMG00000179750.1 27132 385 2 ENSG00000126653.14 NSRP1 chr17 30115521 30186475 + protein_coding KNOWN OTTHUMG00000132754.6 70955 4806 93 ENSG00000199071.2 MIR423 chr17 30117079 30117172 + miRNA KNOWN NA 94 94 1 ENSG00000266919.1 MIR3184 chr17 30117079 30117172 - sense_intronic KNOWN OTTHUMG00000179921.1 94 94 1 ENSG00000265739.1 RP11-354P11.3 chr17 30122429 30126118 - antisense NOVEL OTTHUMG00000179752.1 3690 546 2 ENSG00000266987.1 RP11-354P11.8 chr17 30144062 30144790 - antisense NOVEL OTTHUMG00000179923.1 729 360 2 ENSG00000108576.8 SLC6A4 chr17 30194319 30236002 - protein_coding KNOWN OTTHUMG00000132751.4 41684 6983 51 ENSG00000162817.6 C1orf115 chr1 220689845 220699157 + protein_coding KNOWN OTTHUMG00000037361.3 9313 3413 2 ENSG00000264125.1 RP11-354P11.4 chr17 30204318 30206468 + antisense NOVEL OTTHUMG00000179754.1 2151 697 2 ENSG00000266120.1 RP11-354P11.2 chr17 30238741 30252237 + antisense NOVEL OTTHUMG00000179755.1 13497 224 2 ENSG00000252112.1 SNORD63 chr17 30246757 30246820 - snoRNA NOVEL NA 64 64 1 ENSG00000108578.13 BLMH chr17 30248195 30292056 - protein_coding KNOWN OTTHUMG00000179756.4 43862 5127 66 ENSG00000222679.1 RNU6-1267P chr17 30288071 30288177 - snRNA KNOWN NA 107 107 1 ENSG00000182271.11 TMIGD1 chr17 30316333 30334059 - protein_coding KNOWN OTTHUMG00000179757.1 17727 1228 13 ENSG00000207132.1 Y_RNA chr17 30344503 30344604 - misc_RNA NOVEL NA 102 102 1 ENSG00000201255.1 RNU6-990P chr17 30360463 30360566 + snRNA KNOWN NA 104 104 1 ENSG00000108582.10 CPD chr17 30378905 30469989 + protein_coding KNOWN OTTHUMG00000132797.5 91085 12532 70 ENSG00000108587.13 GOSR1 chr17 30477362 30527592 + protein_coding KNOWN OTTHUMG00000132796.3 50231 10160 91 ENSG00000162493.15 PDPN chr1 13583465 13617957 + protein_coding KNOWN OTTHUMG00000007912.5 34493 3707 68 ENSG00000117791.14 MARC2 chr1 220748225 220784815 + protein_coding KNOWN OTTHUMG00000037354.5 36591 2597 25 ENSG00000264958.2 ALOX12P1 chr17 30529688 30542416 + unprocessed_pseudogene KNOWN OTTHUMG00000178853.2 12729 1229 9 ENSG00000263860.1 RP11-218M11.3 chr17 30550493 30551189 - lincRNA NOVEL OTTHUMG00000178854.1 697 280 2 ENSG00000279431.1 RP11-218M11.7 chr17 30551193 30551802 + TEC KNOWN OTTHUMG00000179926.1 610 610 1 ENSG00000264242.2 RP11-271K11.1 chr17 30553697 30558962 + unprocessed_pseudogene KNOWN OTTHUMG00000178856.2 5266 627 7 ENSG00000266733.4 TBC1D29 chr17 30557112 30563493 + protein_coding KNOWN OTTHUMG00000178857.1 6382 3842 17 ENSG00000266775.1 RP11-218M11.6 chr17 30557732 30558502 - antisense NOVEL OTTHUMG00000178858.1 771 771 1 ENSG00000259928.1 RP11-218M11.1 chr17 30564057 30565576 - lincRNA NOVEL OTTHUMG00000176030.1 1520 1520 1 ENSG00000231870.4 KRT17P3 chr17 30567700 30571748 - unprocessed_pseudogene KNOWN OTTHUMG00000132805.3 4049 1262 7 ENSG00000231421.6 AC006050.2 chr17 30573471 30577000 - processed_transcript NOVEL OTTHUMG00000132806.3 3530 1787 8 ENSG00000214719.10 AC005562.1 chr17 30576464 30672789 + processed_transcript NOVEL OTTHUMG00000132793.2 96326 6036 26 ENSG00000186205.11 MARC1 chr1 220786759 220819657 + protein_coding KNOWN OTTHUMG00000037353.4 32899 9258 32 ENSG00000248121.7 SMURF2P1 chr17 30600796 30615980 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000132798.3 15185 570 10 ENSG00000273609.1 RP11-271K11.6 chr17 30617680 30617790 - unprocessed_pseudogene KNOWN OTTHUMG00000187907.1 111 111 1 ENSG00000264943.1 SH3GL1P2 chr17 30624413 30625494 + processed_pseudogene KNOWN OTTHUMG00000178988.1 1082 1082 1 ENSG00000250462.7 LRRC37BP1 chr17 30629680 30637466 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000132795.3 7787 5202 10 ENSG00000241631.3 RN7SL316P chr17 30702504 30702775 - misc_RNA KNOWN NA 272 272 1 ENSG00000281673.1 AC005562.2 chr17 30702506 30702586 - miRNA NOVEL NA 81 81 1 ENSG00000264538.5 SUZ12P1 chr17 30709299 30790908 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000178989.2 81610 3776 43 ENSG00000279337.1 CTD-2349P21.7 chr17 30724982 30725181 - TEC KNOWN OTTHUMG00000179000.1 200 200 1 ENSG00000265443.1 CTD-2349P21.6 chr17 30726305 30727564 - lincRNA NOVEL OTTHUMG00000179001.1 1260 460 2 ENSG00000263603.1 CTD-2349P21.5 chr17 30729469 30731202 + lincRNA NOVEL OTTHUMG00000178993.2 1734 894 4 ENSG00000221571.3 RNU6ATAC35P chr1 220825620 220826063 + lincRNA NOVEL OTTHUMG00000185888.2 444 444 1 ENSG00000280069.1 CTD-2349P21.3 chr17 30738182 30740275 + TEC KNOWN OTTHUMG00000178994.1 2094 2094 1 ENSG00000176390.11 CRLF3 chr17 30769388 30824776 - protein_coding KNOWN OTTHUMG00000179005.1 55389 4472 28 ENSG00000265791.1 CTD-2349P21.10 chr17 30781493 30782221 - sense_intronic NOVEL OTTHUMG00000179006.1 729 308 2 ENSG00000266490.1 CTD-2349P21.9 chr17 30792372 30792833 + lincRNA NOVEL OTTHUMG00000179007.1 462 462 1 ENSG00000276250.1 CTD-2349P21.12 chr17 30803654 30804077 + antisense NOVEL OTTHUMG00000186638.1 424 424 1 ENSG00000242439.1 CTD-2349P21.1 chr17 30830901 30831318 + processed_pseudogene KNOWN OTTHUMG00000157806.1 418 418 1 ENSG00000176208.7 ATAD5 chr17 30831970 30895869 + protein_coding KNOWN OTTHUMG00000132794.2 63900 7075 51 ENSG00000265334.1 CTD-2349P21.11 chr17 30834325 30863028 - antisense NOVEL OTTHUMG00000179023.1 28704 638 2 ENSG00000212190.1 RNU6-298P chr17 30861843 30861938 + snRNA KNOWN NA 96 96 1 ENSG00000263531.1 RP13-753N3.1 chr17 30863921 30864940 - antisense NOVEL OTTHUMG00000179024.1 1020 831 2 ENSG00000276642.1 U6atac chr1 220825776 220825893 + snRNA NOVEL NA 118 118 1 ENSG00000172171.9 TEFM chr17 30897336 30906820 - protein_coding KNOWN OTTHUMG00000179029.1 9485 3224 15 ENSG00000275185.1 RP13-753N3.3 chr17 30899110 30899651 + antisense NOVEL OTTHUMG00000186639.1 542 542 1 ENSG00000184060.9 ADAP2 chr17 30906344 30959322 + protein_coding KNOWN OTTHUMG00000132868.3 52979 3750 69 ENSG00000230113.1 AC091177.1 chr17 30956280 30956961 - antisense NOVEL OTTHUMG00000132799.1 682 545 2 ENSG00000266274.2 RN7SL138P chr17 30959564 30959850 + misc_RNA KNOWN NA 287 287 1 ENSG00000265743.1 RP11-848P1.3 chr17 30964935 30965500 - lincRNA NOVEL OTTHUMG00000179049.1 566 409 2 ENSG00000181481.12 RNF135 chr17 30968785 30999911 + protein_coding KNOWN OTTHUMG00000132867.5 31127 3580 27 ENSG00000264456.1 RP11-848P1.2 chr17 30971652 30973312 + sense_intronic NOVEL OTTHUMG00000179051.1 1661 1661 1 ENSG00000264743.2 DPRXP4 chr17 30975387 30975954 + processed_pseudogene KNOWN OTTHUMG00000179181.2 568 568 1 ENSG00000266340.1 RP11-848P1.4 chr17 30978610 30980250 - antisense NOVEL OTTHUMG00000179052.1 1641 668 2 ENSG00000272823.1 RP11-295M18.6 chr1 220828676 220829211 - lincRNA NOVEL OTTHUMG00000185889.1 536 536 1 ENSG00000264148.1 RP11-848P1.7 chr17 31008154 31008319 - processed_pseudogene KNOWN OTTHUMG00000179053.1 166 166 1 ENSG00000266865.5 RP11-848P1.9 chr17 31008497 31093127 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000179182.2 84631 2147 27 ENSG00000265798.5 RP11-271K11.5 chr17 31038575 31059121 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000179054.2 20547 2513 13 ENSG00000264107.1 RP11-848P1.5 chr17 31090787 31095450 - antisense NOVEL OTTHUMG00000179055.1 4664 492 3 ENSG00000265444.1 MIR4733 chr17 31094350 31094425 - miRNA KNOWN NA 76 76 1 ENSG00000196712.15 NF1 chr17 31094927 31382116 + protein_coding KNOWN OTTHUMG00000132871.5 287190 26685 389 ENSG00000266371.1 RP11-142O6.1 chr17 31133182 31138518 + sense_intronic NOVEL OTTHUMG00000179255.1 5337 2780 2 ENSG00000126861.4 OMG chr17 31272013 31297539 - protein_coding KNOWN OTTHUMG00000132870.2 25527 3837 8 ENSG00000185862.6 EVI2B chr17 31303766 31314112 - protein_coding KNOWN OTTHUMG00000132869.2 10347 2072 5 ENSG00000265118.4 CTD-2370N5.3 chr17 31305213 31318831 - protein_coding NOVEL OTTHUMG00000179278.2 13619 1242 14 ENSG00000238078.1 LINC01352 chr1 220829255 220832429 + lincRNA NOVEL OTTHUMG00000037355.1 3175 962 4 ENSG00000126860.10 EVI2A chr17 31317560 31321884 - protein_coding KNOWN OTTHUMG00000159306.3 4325 2071 7 ENSG00000263535.1 AK4P1 chr17 31345521 31346187 + processed_pseudogene KNOWN OTTHUMG00000179256.1 667 667 1 ENSG00000131242.14 RAB11FIP4 chr17 31391624 31538217 + protein_coding KNOWN OTTHUMG00000132787.5 146594 15383 61 ENSG00000276244.1 AC135724.1 chr17 31427203 31427296 + miRNA NOVEL NA 94 94 1 ENSG00000239595.3 RN7SL79P chr17 31465543 31465832 + misc_RNA KNOWN NA 290 290 1 ENSG00000264862.2 RN7SL45P chr17 31518432 31518729 + misc_RNA KNOWN NA 298 298 1 ENSG00000278977.1 RP1-41C23.2 chr17 31533171 31533938 - TEC KNOWN OTTHUMG00000179280.1 768 768 1 ENSG00000266459.1 MIR4724 chr17 31534883 31534971 + miRNA KNOWN NA 89 89 1 ENSG00000207614.1 MIR193A chr17 31559996 31560083 + miRNA KNOWN NA 88 88 1 ENSG00000278546.1 RP1-41C23.4 chr17 31560132 31560573 + lincRNA NOVEL OTTHUMG00000186640.1 442 442 1 ENSG00000257551.1 HLX-AS1 chr1 220832763 220880140 - antisense NOVEL OTTHUMG00000170038.2 47378 563 3 ENSG00000221038.1 RNU6ATAC7P chr17 31563768 31563894 - snRNA KNOWN NA 127 127 1 ENSG00000228768.1 AC003101.1 chr17 31571142 31575659 + lincRNA NOVEL OTTHUMG00000132786.1 4518 459 3 ENSG00000265976.1 MIR4725 chr17 31575269 31575358 + miRNA KNOWN NA 90 90 1 ENSG00000199187.1 MIR365B chr17 31575411 31575521 + miRNA KNOWN NA 111 111 1 ENSG00000266877.1 RP1-41C23.1 chr17 31583162 31637543 + lincRNA NOVEL OTTHUMG00000179148.2 54382 568 4 ENSG00000266448.1 RP11-805L22.1 chr17 31709568 31709859 + processed_pseudogene KNOWN OTTHUMG00000179288.1 292 292 1 ENSG00000202026.1 RNU6-1134P chr17 31713753 31713853 + snRNA KNOWN NA 101 101 1 ENSG00000265863.1 RP11-805L22.2 chr17 31759795 31761385 + processed_pseudogene KNOWN OTTHUMG00000179289.1 1591 1591 1 ENSG00000263567.1 RP11-805L22.3 chr17 31762440 31769048 + lincRNA NOVEL OTTHUMG00000179290.1 6609 505 2 ENSG00000265046.1 CTC-542B22.1 chr17 31830731 31831750 + lincRNA NOVEL OTTHUMG00000179321.1 1020 397 2 ENSG00000136630.12 HLX chr1 220879400 220885059 + protein_coding KNOWN OTTHUMG00000037352.4 5660 5660 9 ENSG00000172301.9 COPRS chr17 31851864 31859337 - protein_coding KNOWN OTTHUMG00000132812.2 7474 1432 20 ENSG00000108651.8 UTP6 chr17 31860899 31901765 - protein_coding KNOWN OTTHUMG00000132815.4 40867 6450 72 ENSG00000263990.1 CTC-542B22.2 chr17 31873926 31886666 + lincRNA NOVEL OTTHUMG00000179322.1 12741 488 2 ENSG00000178691.9 SUZ12 chr17 31937018 32001045 + protein_coding KNOWN OTTHUMG00000132813.2 64028 6547 36 ENSG00000253058.1 RNA5SP437 chr17 31963805 31963933 - rRNA KNOWN NA 129 129 1 ENSG00000264300.1 RP11-640N20.1 chr17 32003110 32006688 - transcribed_processed_pseudogene KNOWN OTTHUMG00000179323.1 3579 299 3 ENSG00000185158.11 LRRC37B chr17 32007872 32053504 + protein_coding KNOWN OTTHUMG00000132785.2 45633 6281 128 ENSG00000264497.1 RP11-640N20.5 chr17 32024469 32024583 - processed_pseudogene KNOWN OTTHUMG00000179462.1 115 115 1 ENSG00000266777.1 SH3GL1P1 chr17 32039974 32042828 + transcribed_processed_pseudogene KNOWN OTTHUMG00000179459.1 2855 2855 3 ENSG00000278867.1 RP11-640N20.4 chr17 32051030 32053208 + TEC KNOWN OTTHUMG00000179458.1 2179 2179 1 ENSG00000226211.1 RP11-453O22.1 chr1 221133865 221134221 - processed_pseudogene KNOWN OTTHUMG00000037356.1 357 357 1 ENSG00000264164.1 RP11-640N20.6 chr17 32083179 32097065 + transcribed_processed_pseudogene KNOWN OTTHUMG00000179560.1 13887 507 4 ENSG00000266379.5 RP11-640N20.8 chr17 32088160 32094933 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000179561.2 6774 299 8 ENSG00000263369.5 RP11-640N20.9 chr17 32106330 32114125 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000179562.2 7796 447 6 ENSG00000265574.1 WDR45BP1 chr17 32111562 32112590 - processed_pseudogene KNOWN OTTHUMG00000179563.1 1029 1029 1 ENSG00000277511.1 CTD-2095E4.5 chr17 32127595 32128454 + lincRNA NOVEL OTTHUMG00000186641.1 860 860 1 ENSG00000263985.1 AC116407.1 chr17 32135729 32135814 - miRNA NOVEL NA 86 86 1 ENSG00000214708.4 AC090616.2 chr17 32141226 32143135 - antisense NOVEL OTTHUMG00000132778.2 1910 1599 2 ENSG00000126858.15 RHOT1 chr17 32142454 32253374 + protein_coding KNOWN OTTHUMG00000179564.3 110921 6372 208 ENSG00000265293.2 ARGFXP2 chr17 32150433 32151504 - processed_pseudogene KNOWN OTTHUMG00000179565.2 1072 949 2 ENSG00000280033.1 CTD-2095E4.3 chr17 32159311 32160371 + TEC KNOWN OTTHUMG00000179566.1 1061 1061 1 ENSG00000234754.1 C1orf140 chr1 221330080 221336296 - lincRNA NOVEL OTTHUMG00000037427.2 6217 4340 5 ENSG00000280020.1 CTD-2095E4.4 chr17 32178946 32180074 - TEC KNOWN OTTHUMG00000179567.1 1129 1129 2 ENSG00000266282.1 UBL5P2 chr17 32227890 32228108 - processed_pseudogene KNOWN OTTHUMG00000179584.1 219 219 1 ENSG00000141314.11 RHBDL3 chr17 32266176 32324661 + protein_coding KNOWN OTTHUMG00000179568.2 58486 5404 47 ENSG00000263674.1 RP11-443G13.2 chr17 32280387 32280953 - antisense NOVEL OTTHUMG00000179569.1 567 326 2 ENSG00000265794.4 RP11-227G15.3 chr17 32324431 32360700 + processed_transcript NOVEL OTTHUMG00000179570.1 36270 561 9 ENSG00000108666.8 C17orf75 chr17 32324565 32350023 - protein_coding KNOWN OTTHUMG00000179585.2 25459 5740 79 ENSG00000265139.1 RP11-227G15.2 chr17 32328441 32329395 + lincRNA NOVEL OTTHUMG00000179571.1 955 271 2 ENSG00000263749.1 OOSP1P2 chr17 32343774 32344124 - processed_pseudogene KNOWN OTTHUMG00000179586.1 351 351 1 ENSG00000207928.1 MIR632 chr17 32350109 32350202 + miRNA KNOWN NA 94 94 1 ENSG00000010244.15 ZNF207 chr17 32350117 32381886 + protein_coding KNOWN OTTHUMG00000132810.3 31770 15834 112 ENSG00000222952.1 RNA5SP41 chr1 13623184 13623284 - rRNA KNOWN NA 101 101 1 ENSG00000232436.1 RP11-103C3.1 chr1 221508559 221510979 + lincRNA NOVEL OTTHUMG00000037165.2 2421 807 2 ENSG00000274341.1 RP11-227G15.10 chr17 32408013 32408309 + lincRNA NOVEL OTTHUMG00000186642.1 297 297 1 ENSG00000278668.1 RP11-227G15.11 chr17 32410159 32410746 + lincRNA NOVEL OTTHUMG00000186643.1 588 588 1 ENSG00000266385.1 RP11-227G15.8 chr17 32411217 32412420 + lincRNA NOVEL OTTHUMG00000179587.1 1204 552 2 ENSG00000279762.2 RP11-227G15.12 chr17 32423971 32446038 - antisense NOVEL OTTHUMG00000189117.2 22068 3449 6 ENSG00000264083.1 RP11-227G15.9 chr17 32430967 32432841 + lincRNA NOVEL OTTHUMG00000179589.1 1875 563 2 ENSG00000264373.1 RP11-227G15.6 chr17 32434939 32435028 - processed_pseudogene KNOWN OTTHUMG00000179590.1 90 90 1 ENSG00000108671.8 PSMD11 chr17 32444261 32483318 + protein_coding KNOWN OTTHUMG00000132811.2 39058 7200 65 ENSG00000202100.1 Y_RNA chr17 32463374 32463482 - misc_RNA NOVEL NA 109 109 1 ENSG00000176749.7 CDK5R1 chr17 32486619 32491256 + protein_coding KNOWN OTTHUMG00000132814.2 4638 4325 7 ENSG00000176658.15 MYO1D chr17 32492522 32877177 - protein_coding KNOWN OTTHUMG00000179636.2 384656 8188 128 ENSG00000227585.2 RP11-103C3.2 chr1 221549786 221550643 - processed_pseudogene KNOWN OTTHUMG00000037205.2 858 858 1 ENSG00000266718.1 RP11-466A19.1 chr17 32495536 32499333 + antisense NOVEL OTTHUMG00000179595.1 3798 2480 2 ENSG00000280245.1 RP11-466A19.4 chr17 32504567 32505644 - TEC KNOWN OTTHUMG00000179637.1 1078 1078 1 ENSG00000265222.1 RP11-466A19.8 chr17 32509954 32523424 - sense_intronic NOVEL OTTHUMG00000179638.1 13471 927 2 ENSG00000263717.1 RP11-466A19.6 chr17 32512869 32519350 - sense_intronic NOVEL OTTHUMG00000179639.1 6482 420 2 ENSG00000279781.1 RP11-466A19.7 chr17 32518322 32518934 - TEC KNOWN OTTHUMG00000179640.1 613 613 1 ENSG00000266599.1 RP11-466A19.3 chr17 32518953 32531492 + antisense NOVEL OTTHUMG00000179596.1 12540 408 2 ENSG00000265337.1 RP11-466A19.5 chr17 32529008 32530049 - sense_intronic NOVEL OTTHUMG00000179641.1 1042 475 2 ENSG00000264458.1 RP11-220C2.1 chr17 32627739 32686484 + antisense NOVEL OTTHUMG00000179598.1 58746 373 3 ENSG00000201178.1 Y_RNA chr17 32830219 32830329 - misc_RNA NOVEL NA 111 111 1 ENSG00000226377.1 AC084809.2 chr17 32876759 32878637 + antisense NOVEL OTTHUMG00000132777.1 1879 591 3 ENSG00000143507.16 DUSP10 chr1 221701424 221742176 - protein_coding KNOWN OTTHUMG00000037269.2 40753 2914 13 ENSG00000236377.1 AC084809.3 chr17 32905662 32906584 + lincRNA NOVEL OTTHUMG00000132776.1 923 512 2 ENSG00000006042.10 TMEM98 chr17 32927910 32945106 + protein_coding KNOWN OTTHUMG00000132882.3 17197 5187 54 ENSG00000141316.11 SPACA3 chr17 32970376 32997877 + protein_coding KNOWN OTTHUMG00000132886.3 27502 1230 22 ENSG00000108684.13 ASIC2 chr17 33013087 34174964 - protein_coding KNOWN OTTHUMG00000132885.4 1161878 5597 31 ENSG00000264598.1 RP1-29G21.1 chr17 33052107 33052867 - sense_intronic NOVEL OTTHUMG00000179660.1 761 427 2 ENSG00000280349.1 RP11-40A13.2 chr17 33099969 33100319 - TEC KNOWN OTTHUMG00000179661.1 351 351 1 ENSG00000266535.1 RP11-40A13.1 chr17 33111858 33131743 + antisense NOVEL OTTHUMG00000179662.1 19886 557 3 ENSG00000265544.1 AA06 chr17 33529787 33533760 - sense_intronic NOVEL OTTHUMG00000179663.1 3974 632 3 ENSG00000265697.1 RP11-31I22.4 chr17 33534110 33541339 + antisense NOVEL OTTHUMG00000179664.1 7230 563 2 ENSG00000265125.4 RP11-31I22.3 chr17 33565764 33624122 + antisense NOVEL OTTHUMG00000179665.1 58359 1324 10 ENSG00000227925.1 RP11-191N8.2 chr1 221827666 221840666 - lincRNA NOVEL OTTHUMG00000037268.1 13001 423 4 ENSG00000265115.1 RP11-31I22.2 chr17 33627027 33635057 + antisense NOVEL OTTHUMG00000179666.1 8031 561 2 ENSG00000264643.1 RP11-118G23.2 chr17 33680577 33680883 + lincRNA NOVEL OTTHUMG00000179667.1 307 307 1 ENSG00000265689.1 RP11-118G23.1 chr17 33688803 33689174 + lincRNA NOVEL OTTHUMG00000179668.1 372 372 1 ENSG00000221699.1 AC024610.1 chr17 33874318 33874458 - miRNA NOVEL NA 141 141 1 ENSG00000265356.1 RP11-17M24.1 chr17 33931132 33936206 - sense_intronic NOVEL OTTHUMG00000179669.1 5075 535 3 ENSG00000263435.1 RP11-17M24.2 chr17 33976531 33980851 + antisense NOVEL OTTHUMG00000179670.1 4321 323 2 ENSG00000279674.1 RP11-1086I4.2 chr17 34000789 34006772 - TEC KNOWN OTTHUMG00000179671.1 5984 5984 1 ENSG00000226049.3 TLK2P1 chr17 34036681 34039872 - processed_pseudogene KNOWN OTTHUMG00000166422.1 3192 3192 1 ENSG00000279668.1 CTC-304I17.1 chr17 34069317 34071251 - TEC KNOWN OTTHUMG00000179672.1 1935 1935 1 ENSG00000263485.1 CTC-304I17.4 chr17 34080882 34082224 - sense_intronic NOVEL OTTHUMG00000179673.1 1343 299 2 ENSG00000200033.1 RNU6-403P chr1 221837334 221837437 - snRNA KNOWN NA 104 104 1 ENSG00000265775.1 CTC-304I17.3 chr17 34118347 34118882 - sense_intronic NOVEL OTTHUMG00000179674.1 536 536 1 ENSG00000252370.1 RNA5SP438 chr17 34120056 34120167 - rRNA KNOWN NA 112 112 1 ENSG00000264791.1 CTC-304I17.2 chr17 34142947 34147047 + antisense NOVEL OTTHUMG00000179675.1 4101 375 2 ENSG00000263571.1 CTC-304I17.5 chr17 34161737 34164251 + lincRNA NOVEL OTTHUMG00000179676.1 2515 803 2 ENSG00000261156.5 RP11-215E13.1 chr17 34169372 34195937 - lincRNA NOVEL OTTHUMG00000176032.2 26566 1284 11 ENSG00000263383.2 AC005549.1 chr17 34174220 34174332 + miRNA NOVEL NA 113 113 1 ENSG00000264990.1 RP11-215E13.2 chr17 34176538 34178166 + lincRNA NOVEL OTTHUMG00000179677.1 1629 1629 1 ENSG00000265501.1 AC005549.2 chr17 34183084 34183135 - miRNA NOVEL NA 52 52 1 ENSG00000108691.8 CCL2 chr17 34255218 34257203 + protein_coding KNOWN OTTHUMG00000132887.3 1986 1986 7 ENSG00000108688.10 CCL7 chr17 34270221 34272242 + protein_coding KNOWN OTTHUMG00000132889.2 2022 863 8 ENSG00000238042.4 RP11-815M8.1 chr1 221880981 221978523 - lincRNA NOVEL OTTHUMG00000037423.1 97543 998 9 ENSG00000172156.3 CCL11 chr17 34285668 34288334 + protein_coding KNOWN OTTHUMG00000132884.2 2667 1079 3 ENSG00000108700.4 CCL8 chr17 34319036 34321402 + protein_coding KNOWN OTTHUMG00000132883.2 2367 1261 3 ENSG00000265614.1 RP11-521P1.1 chr17 34331862 34332228 - processed_pseudogene KNOWN OTTHUMG00000179766.1 367 367 1 ENSG00000181374.6 CCL13 chr17 34356452 34358610 + protein_coding KNOWN OTTHUMG00000132890.2 2159 851 5 ENSG00000108702.3 CCL1 chr17 34360328 34363231 - protein_coding KNOWN OTTHUMG00000132888.2 2904 592 3 ENSG00000225582.1 AC011193.1 chr17 34479312 34479957 + lincRNA NOVEL OTTHUMG00000132738.1 646 350 4 ENSG00000197322.3 C17orf102 chr17 34574123 34579369 - lincRNA KNOWN OTTHUMG00000156883.1 5247 3997 2 ENSG00000181291.5 TMEM132E chr17 34580749 34639318 + protein_coding KNOWN OTTHUMG00000132927.2 58570 4583 12 ENSG00000278860.1 RP11-28A22.2 chr17 34614409 34614809 + TEC KNOWN OTTHUMG00000179767.1 401 401 1 ENSG00000264174.1 RP11-212E8.1 chr17 34725509 34726170 - lincRNA NOVEL OTTHUMG00000179768.1 662 662 1 ENSG00000228437.4 RP11-400N13.2 chr1 221966341 221984964 + lincRNA NOVEL OTTHUMG00000037424.1 18624 1366 6 ENSG00000264622.1 RP11-642M2.1 chr17 34837871 34859046 - lincRNA NOVEL OTTHUMG00000179769.1 21176 469 2 ENSG00000132141.12 CCT6B chr17 34927859 34981078 - protein_coding KNOWN OTTHUMG00000179770.1 53220 4334 53 ENSG00000198783.5 ZNF830 chr17 34961530 34963775 + protein_coding KNOWN OTTHUMG00000179771.1 2246 2246 3 ENSG00000005156.10 LIG3 chr17 34980494 35009743 + protein_coding KNOWN OTTHUMG00000128519.5 29250 12919 106 ENSG00000092871.15 RFFL chr17 35005990 35089319 - protein_coding KNOWN OTTHUMG00000132933.2 83330 8512 62 ENSG00000267618.4 RAD51L3-RFFL chr17 35011349 35121493 - protein_coding KNOWN OTTHUMG00000179827.4 110145 2002 23 ENSG00000273687.1 RP5-837J1.6 chr17 35018660 35018991 + antisense NOVEL OTTHUMG00000186644.1 332 332 1 ENSG00000267457.1 RP5-837J1.4 chr17 35073831 35074374 - lincRNA NOVEL OTTHUMG00000179828.1 544 544 1 ENSG00000243423.1 RP5-837J1.1 chr17 35076737 35077007 + processed_pseudogene KNOWN OTTHUMG00000157809.1 271 271 1 ENSG00000185379.19 RAD51D chr17 35092208 35121522 - protein_coding KNOWN OTTHUMG00000132930.4 29315 11304 157 ENSG00000264972.2 AC092765.1 chr1 222013007 222013090 + miRNA NOVEL NA 84 84 1 ENSG00000252328.1 Vault chr17 35097560 35097657 - misc_RNA NOVEL NA 98 98 1 ENSG00000073598.5 FNDC8 chr17 35121579 35130732 + protein_coding KNOWN OTTHUMG00000132932.2 9154 1388 4 ENSG00000073536.16 NLE1 chr17 35128753 35142315 - protein_coding KNOWN OTTHUMG00000132928.3 13563 5463 64 ENSG00000141161.10 UNC45B chr17 35147817 35189345 + protein_coding KNOWN OTTHUMG00000132931.2 41529 5679 57 ENSG00000267782.1 RP11-799D4.3 chr17 35164243 35167012 - antisense NOVEL OTTHUMG00000179854.1 2770 475 2 ENSG00000266981.1 RP11-799D4.2 chr17 35188522 35191343 + processed_transcript PUTATIVE OTTHUMG00000179855.1 2822 559 2 ENSG00000267744.1 RP11-799D4.1 chr17 35190961 35191702 + transcribed_processed_pseudogene KNOWN OTTHUMG00000179856.1 742 742 1 ENSG00000164729.7 SLC35G3 chr17 35192520 35194523 - protein_coding KNOWN OTTHUMG00000132929.2 2004 2004 1 ENSG00000266947.1 RP11-799D4.4 chr17 35231450 35242963 - antisense NOVEL OTTHUMG00000179857.2 11514 2814 4 ENSG00000166750.8 SLFN5 chr17 35243036 35273655 + protein_coding KNOWN OTTHUMG00000179858.2 30620 10709 11 ENSG00000232679.1 RP11-400N13.3 chr1 222041705 222064763 - lincRNA NOVEL OTTHUMG00000037425.1 23059 562 3 ENSG00000267364.1 RP11-47L3.1 chr17 35313502 35324900 + lincRNA NOVEL OTTHUMG00000179876.1 11399 714 7 ENSG00000267271.1 RP11-686D22.2 chr17 35344231 35344564 + processed_pseudogene KNOWN OTTHUMG00000179877.1 334 334 1 ENSG00000172716.15 SLFN11 chr17 35350305 35373701 - protein_coding KNOWN OTTHUMG00000132948.2 23397 5982 46 ENSG00000267315.1 RP11-686D22.6 chr17 35377416 35377678 - processed_pseudogene KNOWN OTTHUMG00000179886.1 263 263 1 ENSG00000267711.1 RP11-686D22.5 chr17 35400878 35403006 - lincRNA NOVEL OTTHUMG00000179878.1 2129 394 2 ENSG00000267547.1 RP11-686D22.4 chr17 35403837 35404373 - lincRNA NOVEL OTTHUMG00000179879.1 537 537 1 ENSG00000267745.1 RP11-686D22.8 chr17 35406684 35409768 - processed_transcript NOVEL OTTHUMG00000179887.1 3085 1212 2 ENSG00000267648.1 RP11-686D22.3 chr17 35406948 35407818 - transcribed_processed_pseudogene KNOWN OTTHUMG00000179880.2 871 871 1 ENSG00000267102.1 RP11-686D22.7 chr17 35409602 35410228 - transcribed_processed_pseudogene KNOWN OTTHUMG00000179888.1 627 627 1 ENSG00000172123.11 SLFN12 chr17 35411060 35433283 - protein_coding KNOWN OTTHUMG00000132952.2 22224 3560 29 ENSG00000236230.1 RP11-400N13.1 chr1 222089169 222387434 - lincRNA NOVEL OTTHUMG00000037290.1 298266 675 4 ENSG00000154760.12 SLFN13 chr17 35435096 35448837 - protein_coding KNOWN OTTHUMG00000165108.2 13742 9329 53 ENSG00000267312.1 RP11-1094M14.7 chr17 35459481 35460550 - processed_pseudogene KNOWN OTTHUMG00000179898.1 1070 1070 1 ENSG00000205045.7 SLFN12L chr17 35464249 35537861 - protein_coding KNOWN OTTHUMG00000167707.2 73613 4811 17 ENSG00000267554.1 RP11-686D22.10 chr17 35470069 35470628 - processed_pseudogene KNOWN OTTHUMG00000179900.1 560 560 1 ENSG00000267349.1 RP11-686D22.9 chr17 35477994 35478444 + antisense NOVEL OTTHUMG00000179901.1 451 451 1 ENSG00000267046.1 E2F3P1 chr17 35490009 35491238 + processed_pseudogene KNOWN OTTHUMG00000179902.1 1230 1230 1 ENSG00000267369.1 RP11-1094M14.8 chr17 35498218 35499175 + processed_pseudogene KNOWN OTTHUMG00000179903.1 958 958 1 ENSG00000267074.1 RP11-1094M14.5 chr17 35499690 35510270 - sense_intronic NOVEL OTTHUMG00000179904.1 10581 849 3 ENSG00000255987.1 TOMM20P2 chr17 35514766 35515186 - processed_pseudogene KNOWN OTTHUMG00000168389.1 421 421 1 ENSG00000267035.1 RP11-1094M14.10 chr17 35540039 35540797 - lincRNA NOVEL OTTHUMG00000179911.1 759 396 2 ENSG00000266358.1 AL359771.1 chr1 13623902 13624002 - miRNA NOVEL NA 101 101 1 ENSG00000227613.1 QRSL1P2 chr1 222261833 222262796 - processed_pseudogene KNOWN OTTHUMG00000037422.1 964 964 1 ENSG00000236320.3 SLFN14 chr17 35548125 35558098 - protein_coding KNOWN OTTHUMG00000179912.1 9974 2889 4 ENSG00000267359.1 RP11-1094M14.12 chr17 35553205 35554767 + antisense NOVEL OTTHUMG00000179913.1 1563 457 2 ENSG00000267625.1 RP11-1094M14.14 chr17 35561539 35562077 - lincRNA NOVEL OTTHUMG00000179914.1 539 185 2 ENSG00000242660.1 RP11-1094M14.1 chr17 35566517 35566672 + processed_pseudogene KNOWN OTTHUMG00000157810.1 156 156 1 ENSG00000267321.1 RP11-1094M14.11 chr17 35568120 35574792 + lincRNA NOVEL OTTHUMG00000179915.1 6673 1298 2 ENSG00000207297.1 SNORD7 chr17 35573657 35573753 + snoRNA KNOWN NA 97 97 1 ENSG00000108733.8 PEX12 chr17 35574795 35578863 - protein_coding KNOWN OTTHUMG00000132951.2 4069 2861 12 ENSG00000006125.15 AP2B1 chr17 35578046 35726409 + protein_coding KNOWN OTTHUMG00000179924.2 148364 7587 247 ENSG00000267592.1 CTC-507E2.2 chr17 35596904 35597128 - processed_pseudogene KNOWN OTTHUMG00000179970.1 225 225 1 ENSG00000270647.4 TAF15 chr17 35713791 35864615 + protein_coding KNOWN OTTHUMG00000188384.1 150825 5909 116 ENSG00000226643.2 RP11-358H9.1 chr1 222452738 222454705 - lincRNA NOVEL OTTHUMG00000037291.2 1968 318 3 ENSG00000270885.1 RASL10B chr17 35731649 35743521 + protein_coding KNOWN OTTHUMG00000188385.1 11873 3502 6 ENSG00000270765.4 GAS2L2 chr17 35744511 35752878 - protein_coding KNOWN OTTHUMG00000188386.1 8368 3014 20 ENSG00000271447.4 MMP28 chr17 35756249 35795707 - protein_coding KNOWN OTTHUMG00000188387.1 39459 2858 38 ENSG00000271392.1 RP1-161P9.5 chr17 35757199 35758325 - sense_intronic NOVEL OTTHUMG00000188388.1 1127 480 2 ENSG00000270806.1 C17orf50 chr17 35760897 35765079 + protein_coding KNOWN OTTHUMG00000188389.1 4183 1063 9 ENSG00000270829.1 AC015849.12 chr17 35808489 35808897 - lincRNA NOVEL OTTHUMG00000188390.1 409 409 1 ENSG00000270871.1 AC015849.19 chr17 35816717 35830293 - antisense NOVEL OTTHUMG00000188391.1 13577 488 2 ENSG00000270894.1 AC015849.13 chr17 35818399 35823713 + sense_overlapping NOVEL OTTHUMG00000188392.1 5315 421 2 ENSG00000270379.4 HEATR9 chr17 35854946 35868891 - protein_coding KNOWN OTTHUMG00000188393.2 13946 2930 100 ENSG00000271268.1 AC015849.14 chr17 35861093 35861566 - processed_pseudogene KNOWN OTTHUMG00000188394.1 474 474 1 ENSG00000234419.1 CICP13 chr1 222468094 222470882 + processed_pseudogene KNOWN OTTHUMG00000037480.1 2789 2789 1 ENSG00000270240.2 AC015849.2 chr17 35868967 35885863 + antisense NOVEL OTTHUMG00000188395.1 16897 755 6 ENSG00000271503.4 CCL5 chr17 35871491 35880793 - protein_coding KNOWN OTTHUMG00000188396.1 9303 1512 11 ENSG00000271394.1 7SK chr17 35889558 35889804 + misc_RNA NOVEL NA 247 247 1 ENSG00000270977.1 AC015849.16 chr17 35893707 35911023 - lincRNA NOVEL OTTHUMG00000188397.1 17317 5749 4 ENSG00000271013.1 AC015849.15 chr17 35912635 35918010 - processed_pseudogene KNOWN OTTHUMG00000188398.1 5376 5376 1 ENSG00000278023.3 RDM1 chr17 35918066 35930773 - protein_coding KNOWN OTTHUMG00000188399.1 12708 1975 68 ENSG00000275722.3 LYZL6 chr17 35934518 35943699 - protein_coding KNOWN OTTHUMG00000188400.1 9182 1126 13 ENSG00000273736.1 CTB-186H2.2 chr17 35963488 35965472 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000188401.1 1985 407 4 ENSG00000275152.3 CCL16 chr17 35976493 35981496 - protein_coding KNOWN OTTHUMG00000188402.1 5004 1744 11 ENSG00000276409.3 CCL14 chr17 35983291 35987004 - protein_coding KNOWN OTTHUMG00000188403.1 3714 3269 12 ENSG00000276997.3 RP11-378J18.9 chr1 222477252 222504622 - lincRNA NOVEL OTTHUMG00000186710.1 27371 1588 19 ENSG00000275688.3 CCL15-CCL14 chr17 35983656 36001621 - protein_coding NOVEL OTTHUMG00000188405.1 17966 1047 15 ENSG00000275431.1 CTB-186H2.3 chr17 35983656 35990270 + antisense NOVEL OTTHUMG00000188404.1 6615 3952 4 ENSG00000275718.1 CCL15 chr17 35996440 36002038 - protein_coding KNOWN OTTHUMG00000188406.1 5599 1560 7 ENSG00000275944.1 RP11-104J23.1 chr17 36001419 36011618 + antisense NOVEL OTTHUMG00000188407.1 10200 1919 4 ENSG00000278690.1 RP11-104J23.2 chr17 36012504 36012891 + lincRNA NOVEL OTTHUMG00000188408.1 388 388 1 ENSG00000274736.3 CCL23 chr17 36013056 36017968 - protein_coding KNOWN OTTHUMG00000188409.1 4913 738 10 ENSG00000275385.1 CCL18 chr17 36064280 36072032 + protein_coding KNOWN OTTHUMG00000188410.1 7753 1397 5 ENSG00000277089.3 AC069363.1 chr17 36072866 36090134 + antisense NOVEL OTTHUMG00000188411.1 17269 1706 13 ENSG00000277632.1 CCL3 chr17 36088256 36090169 - protein_coding KNOWN OTTHUMG00000188413.1 1914 1494 7 ENSG00000275302.1 CCL4 chr17 36103590 36105621 + protein_coding KNOWN OTTHUMG00000188414.1 2032 2032 6 ENSG00000222399.1 RNU6-791P chr1 222503632 222503735 - snRNA KNOWN NA 104 104 1 ENSG00000276014.1 Metazoa_SRP chr17 36110150 36110447 + misc_RNA NOVEL NA 298 298 1 ENSG00000276241.1 CTB-91J4.1 chr17 36116177 36177510 + antisense NOVEL OTTHUMG00000188415.1 61334 610 5 ENSG00000275347.1 RP11-428O23.1 chr17 36162832 36162916 + processed_pseudogene KNOWN OTTHUMG00000188416.1 85 85 1 ENSG00000274808.3 TBC1D3B chr17 36165624 36264527 - protein_coding KNOWN OTTHUMG00000188417.1 98904 3014 42 ENSG00000274767.1 AC131056.3 chr17 36183235 36196471 + antisense NOVEL OTTHUMG00000188418.1 13237 1401 7 ENSG00000276085.1 CCL3L3 chr17 36194869 36196758 - protein_coding KNOWN OTTHUMG00000188419.1 1890 1469 8 ENSG00000276070.3 CCL4L1 chr17 36210924 36212878 + protein_coding KNOWN OTTHUMG00000188420.1 1955 1397 27 ENSG00000278097.1 AC131056.5 chr17 36225246 36226807 - lincRNA NOVEL OTTHUMG00000188421.1 1562 247 2 ENSG00000276755.1 RP11-893G17.4 chr17 36234447 36234554 - unprocessed_pseudogene KNOWN OTTHUMG00000188422.1 108 108 1 ENSG00000278395.1 AC131056.6 chr17 36241701 36241806 + processed_pseudogene KNOWN OTTHUMG00000188423.1 106 106 1 ENSG00000267305.2 RP11-378J18.10 chr1 222510169 222519732 - unprocessed_pseudogene KNOWN OTTHUMG00000187547.1 9564 372 4 ENSG00000274933.3 TBC1D3I chr17 36253456 36439559 - protein_coding KNOWN OTTHUMG00000188424.1 186104 3519 51 ENSG00000261499.2 CH17-260O16.1 chr17 36274191 36320547 + unprocessed_pseudogene KNOWN OTTHUMG00000188425.1 46357 1168 11 ENSG00000265889.1 Y_RNA chr17 36285312 36285413 + misc_RNA NOVEL NA 102 102 1 ENSG00000260287.4 TBC1D3G chr17 36323884 36334759 + protein_coding KNOWN OTTHUMG00000188426.1 10876 2065 14 ENSG00000274226.3 TBC1D3H chr17 36377348 36439566 - protein_coding NOVEL OTTHUMG00000188427.1 62219 2902 28 ENSG00000275954.3 TBC1D3F chr17 36377846 36439566 - protein_coding NOVEL OTTHUMG00000188428.1 61721 2845 42 ENSG00000277029.1 U6 chr17 36404826 36404932 - snRNA NOVEL NA 107 107 1 ENSG00000274658.1 TBC1D3J chr17 36450146 36457535 - unprocessed_pseudogene KNOWN OTTHUMG00000188429.1 7390 1426 11 ENSG00000273611.3 ZNHIT3 chr17 36486629 36499310 + protein_coding KNOWN OTTHUMG00000188436.1 12682 6687 45 ENSG00000274164.1 5S_rRNA chr17 36491199 36491322 - rRNA NOVEL NA 124 124 1 ENSG00000143512.11 HHIPL2 chr1 222522258 222548103 - protein_coding KNOWN OTTHUMG00000037545.3 25846 3289 21 ENSG00000278259.3 MYO19 chr17 36495633 36543435 - protein_coding KNOWN OTTHUMG00000188437.1 47803 13075 197 ENSG00000277161.1 PIGW chr17 36535020 36539310 + protein_coding KNOWN OTTHUMG00000188438.1 4291 2799 6 ENSG00000278311.3 GGNBP2 chr17 36544888 36589848 + protein_coding KNOWN OTTHUMG00000188440.1 44961 9729 50 ENSG00000274756.1 CTB-75G16.1 chr17 36574462 36575325 - processed_pseudogene KNOWN OTTHUMG00000188441.1 864 864 1 ENSG00000278535.3 DHRS11 chr17 36591798 36600806 + protein_coding KNOWN OTTHUMG00000188442.1 9009 5462 34 ENSG00000278619.3 MRM1 chr17 36601572 36608971 + protein_coding KNOWN OTTHUMG00000188443.1 7400 1857 10 ENSG00000275720.1 CTB-75G16.3 chr17 36634069 36634698 + lincRNA NOVEL OTTHUMG00000188444.1 630 630 1 ENSG00000276508.1 CTD-3194G12.1 chr17 36684754 36685129 + lincRNA NOVEL OTTHUMG00000188445.1 376 376 1 ENSG00000275613.1 CTD-3194G12.2 chr17 36722583 36726340 + lincRNA NOVEL OTTHUMG00000188446.1 3758 455 3 ENSG00000277268.1 RP11-445F12.1 chr17 36861674 36936661 - antisense NOVEL OTTHUMG00000188447.1 74988 2544 11 ENSG00000143498.16 TAF1A chr1 222557902 222589933 - protein_coding KNOWN OTTHUMG00000037544.2 32032 2895 60 ENSG00000273706.3 LHX1 chr17 36936785 36944612 + protein_coding KNOWN OTTHUMG00000188456.1 7828 4882 15 ENSG00000276707.1 RP11-445F12.2 chr17 36940049 36943456 - antisense NOVEL OTTHUMG00000188457.1 3408 544 2 ENSG00000275700.3 AATF chr17 36948875 37056871 + protein_coding KNOWN OTTHUMG00000188458.1 107997 4714 36 ENSG00000277911.1 RP11-333J10.2 chr17 36980167 36980422 + sense_intronic NOVEL OTTHUMG00000188459.1 256 256 1 ENSG00000277589.1 RP11-333J10.3 chr17 36998598 37000034 + sense_intronic NOVEL OTTHUMG00000188460.1 1437 710 2 ENSG00000276326.1 MIR2909 chr17 37033745 37033813 + miRNA KNOWN NA 69 69 1 ENSG00000277579.1 CTC-268N12.3 chr17 37034668 37043252 + sense_intronic NOVEL OTTHUMG00000188461.1 8585 411 2 ENSG00000278638.1 CTC-268N12.2 chr17 37045462 37052775 - antisense NOVEL OTTHUMG00000188462.1 7314 718 3 ENSG00000278540.3 ACACA chr17 37084988 37406818 - protein_coding KNOWN OTTHUMG00000188463.1 321831 13008 365 ENSG00000274308.1 RP11-19G24.1 chr17 37140611 37141424 - processed_pseudogene KNOWN OTTHUMG00000188464.1 814 814 1 ENSG00000225265.1 TAF1A-AS1 chr1 222589825 222593032 + antisense NOVEL OTTHUMG00000037542.1 3208 1450 7 ENSG00000275029.1 RP11-19G24.3 chr17 37143607 37144463 - transcribed_processed_pseudogene KNOWN OTTHUMG00000188465.1 857 857 2 ENSG00000276810.1 RP11-19G24.2 chr17 37162616 37163139 + processed_pseudogene KNOWN OTTHUMG00000188466.1 524 524 1 ENSG00000278660.1 AC243654.1 chr17 37314341 37314439 + miRNA NOVEL NA 99 99 1 ENSG00000278505.3 C17orf78 chr17 37375986 37392708 + protein_coding KNOWN OTTHUMG00000188467.1 16723 1919 12 ENSG00000276054.1 RP11-378E13.3 chr17 37386886 37387926 + sense_intronic NOVEL OTTHUMG00000188468.1 1041 735 2 ENSG00000276234.3 TADA2A chr17 37406874 37479730 + protein_coding KNOWN OTTHUMG00000188469.1 72857 5654 139 ENSG00000273965.1 RP11-378E13.4 chr17 37407936 37408594 - antisense NOVEL OTTHUMG00000188470.1 659 293 2 ENSG00000275839.1 CTC-421K24.1 chr17 37454171 37454931 + processed_pseudogene KNOWN OTTHUMG00000188471.1 761 443 2 ENSG00000276023.3 DUSP14 chr17 37489831 37513501 + protein_coding KNOWN OTTHUMG00000188472.1 23671 2499 8 ENSG00000275066.3 SYNRG chr17 37514797 37609496 - protein_coding KNOWN OTTHUMG00000188473.1 94700 14277 184 ENSG00000154305.15 MIA3 chr1 222618086 222668012 + protein_coding KNOWN OTTHUMG00000037543.5 49927 10171 104 ENSG00000278053.3 DDX52 chr17 37609739 37643464 - protein_coding KNOWN OTTHUMG00000188475.1 33726 9546 74 ENSG00000277688.1 RP11-697E22.1 chr17 37609739 37613841 + antisense NOVEL OTTHUMG00000188474.1 4103 508 2 ENSG00000274620.1 MIR378J chr17 37614931 37615039 - miRNA KNOWN NA 109 109 1 ENSG00000277501.1 RP11-697E22.2 chr17 37642947 37684252 + antisense NOVEL OTTHUMG00000188476.1 41306 1095 4 ENSG00000274244.1 RP11-697E22.3 chr17 37649133 37650894 + lincRNA NOVEL OTTHUMG00000188477.1 1762 607 2 ENSG00000275410.3 HNF1B chr17 37686432 37745247 - protein_coding KNOWN OTTHUMG00000188478.1 58816 5962 49 ENSG00000275173.1 AC091199.1 chr17 37798894 37802788 - lincRNA NOVEL OTTHUMG00000188479.1 3895 478 3 ENSG00000276715.3 YWHAEP7 chr17 37828305 37884743 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000188480.1 56439 2996 13 ENSG00000277341.1 U6 chr17 37907957 37908063 + snRNA NOVEL NA 107 107 1 ENSG00000273513.1 TBC1D3K chr17 37924415 37935365 + protein_coding KNOWN OTTHUMG00000188481.1 10951 2116 14 ENSG00000237445.2 CTA-520D8.2 chr1 13657311 13659910 - lincRNA NOVEL OTTHUMG00000007915.2 2600 379 2 ENSG00000229399.1 RP11-378J18.6 chr1 222641414 222641858 - processed_pseudogene KNOWN OTTHUMG00000037652.1 445 445 1 ENSG00000274419.3 TBC1D3D chr17 37924458 38139051 + protein_coding KNOWN OTTHUMG00000188483.1 214594 3296 42 ENSG00000277488.1 5S_rRNA chr17 37940704 37940790 - rRNA NOVEL NA 87 87 1 ENSG00000274512.3 TBC1D3L chr17 37977972 38068651 - protein_coding NOVEL OTTHUMG00000188482.1 90680 2902 41 ENSG00000278299.3 TBC1D3C chr17 37978470 38068592 - protein_coding NOVEL OTTHUMG00000188484.1 90123 2785 27 ENSG00000278599.3 TBC1D3E chr17 38005561 38138862 + protein_coding KNOWN OTTHUMG00000188486.1 133302 2573 27 ENSG00000274615.1 CH17-258A22.4 chr17 38078262 38124770 + unprocessed_pseudogene KNOWN OTTHUMG00000188485.1 46509 1300 11 ENSG00000275006.1 Y_RNA chr17 38089399 38089500 + misc_RNA NOVEL NA 102 102 1 ENSG00000274663.1 5S_rRNA chr17 38144201 38144287 - rRNA NOVEL NA 87 87 1 ENSG00000274611.3 TBC1D3 chr17 38181659 38192541 - protein_coding NOVEL OTTHUMG00000188487.1 10883 2063 14 ENSG00000274487.1 CH17-431G21.1 chr17 38195740 38257152 - unprocessed_pseudogene KNOWN OTTHUMG00000188488.1 61413 1555 12 ENSG00000272750.1 RP11-378J18.8 chr1 222658867 222661512 - antisense NOVEL OTTHUMG00000185864.2 2646 2646 1 ENSG00000274284.1 Y_RNA chr17 38231043 38231144 - misc_RNA NOVEL NA 102 102 1 ENSG00000278845.3 MRPL45 chr17 38297023 38323218 + protein_coding KNOWN OTTHUMG00000188489.1 26196 1705 15 ENSG00000277399.3 GPR179 chr17 38325530 38343847 - protein_coding KNOWN OTTHUMG00000188545.1 18318 8182 26 ENSG00000274211.3 SOCS7 chr17 38352228 38405593 + protein_coding KNOWN OTTHUMG00000188546.1 53366 8621 33 ENSG00000275832.3 ARHGAP23 chr17 38428418 38512392 + protein_coding KNOWN OTTHUMG00000188547.1 83975 8013 88 ENSG00000276170.3 AC124789.1 chr17 38450394 38452444 - processed_transcript NOVEL OTTHUMG00000188548.1 2051 1248 17 ENSG00000277363.3 SRCIN1 chr17 38530016 38605930 - protein_coding KNOWN OTTHUMG00000188493.1 75915 11658 105 ENSG00000274996.1 CTB-58E17.2 chr17 38601049 38602701 + antisense NOVEL OTTHUMG00000188494.1 1653 571 2 ENSG00000273604.1 C17orf96 chr17 38671703 38675421 - protein_coding KNOWN OTTHUMG00000188495.1 3719 3719 1 ENSG00000275238.1 MIR4734 chr17 38702262 38702331 - miRNA KNOWN NA 70 70 1 ENSG00000186063.11 AIDA chr1 222668013 222713210 - protein_coding KNOWN OTTHUMG00000037653.2 45198 4232 49 ENSG00000277969.1 CTB-58E17.1 chr17 38702452 38704747 + lincRNA NOVEL OTTHUMG00000188496.1 2296 2296 1 ENSG00000275532.1 CTB-58E17.3 chr17 38703480 38706261 - antisense NOVEL OTTHUMG00000188497.1 2782 486 2 ENSG00000275023.3 MLLT6 chr17 38705542 38729803 + protein_coding KNOWN OTTHUMG00000188498.1 24262 13315 68 ENSG00000275665.1 CTB-58E17.9 chr17 38715328 38720272 - antisense NOVEL OTTHUMG00000188499.1 4945 563 5 ENSG00000273627.1 MIR4726 chr17 38719691 38719748 + miRNA KNOWN NA 58 58 1 ENSG00000279119.1 AC006449.2 chr17 38727833 38728198 - protein_coding KNOWN NA 366 366 1 ENSG00000277972.1 CISD3 chr17 38730235 38735044 + protein_coding KNOWN OTTHUMG00000188500.1 4810 2663 9 ENSG00000276036.1 5S_rRNA chr17 38731802 38731920 - rRNA NOVEL NA 119 119 1 ENSG00000277258.3 PCGF2 chr17 38733897 38749817 - protein_coding KNOWN OTTHUMG00000188501.1 15921 3511 65 ENSG00000277182.1 CTB-58E17.5 chr17 38749360 38751457 + antisense NOVEL OTTHUMG00000188502.1 2098 2098 1 ENSG00000162819.10 BROX chr1 222712553 222735196 + protein_coding KNOWN OTTHUMG00000037650.2 22644 4980 78 ENSG00000277791.3 PSMB3 chr17 38752736 38764231 + protein_coding KNOWN OTTHUMG00000188503.1 11496 1179 26 ENSG00000274607.1 U6 chr17 38755279 38755400 - snRNA NOVEL NA 122 122 1 ENSG00000276293.3 PIP4K2B chr17 38765689 38800126 - protein_coding KNOWN OTTHUMG00000188504.1 34438 6135 28 ENSG00000273559.3 CWC25 chr17 38800434 38825481 - protein_coding KNOWN OTTHUMG00000188505.1 25048 3848 50 ENSG00000274054.1 MIR4727 chr17 38825838 38825892 + miRNA KNOWN NA 55 55 1 ENSG00000275489.1 C17orf98 chr17 38835088 38841455 - protein_coding KNOWN OTTHUMG00000188506.1 6368 632 3 ENSG00000125691.11 RPL23 chr17 38847865 38853843 - protein_coding KNOWN OTTHUMG00000133118.3 5979 5979 40 ENSG00000252699.1 SNORA21 chr17 38851524 38851659 - snoRNA NOVEL NA 136 136 1 ENSG00000199293.1 SNORA21 chr17 38852863 38852994 - snoRNA KNOWN NA 132 132 1 ENSG00000244086.1 RPS20P35 chr17 38855314 38855670 + processed_pseudogene KNOWN OTTHUMG00000157838.1 357 357 1 ENSG00000197520.9 FAM177B chr1 222737207 222750805 + protein_coding KNOWN OTTHUMG00000037766.2 13599 2603 28 ENSG00000002834.16 LASP1 chr17 38869859 38921770 + protein_coding KNOWN OTTHUMG00000133182.6 51912 7061 51 ENSG00000263466.1 RP1-56K13.2 chr17 38903704 38904600 - antisense NOVEL OTTHUMG00000178866.1 897 437 2 ENSG00000277057.1 MIR6779 chr17 38914979 38915042 + miRNA KNOWN NA 64 64 1 ENSG00000265784.1 RP1-56K13.3 chr17 38918801 38921769 - antisense NOVEL OTTHUMG00000178867.1 2969 456 2 ENSG00000263874.1 LINC00672 chr17 38925168 38928057 + lincRNA NOVEL OTTHUMG00000178440.2 2890 2365 2 ENSG00000204952.2 FBXO47 chr17 38936432 38967402 - protein_coding KNOWN OTTHUMG00000178945.1 30971 2302 11 ENSG00000265428.1 RP1-56K13.6 chr17 38996323 38996624 - processed_pseudogene KNOWN OTTHUMG00000178946.1 302 302 1 ENSG00000266588.1 RP1-56K13.5 chr17 39003248 39013032 - lincRNA NOVEL OTTHUMG00000178947.1 9785 983 5 ENSG00000277426.1 CTD-2206N4.5 chr17 39023394 39026742 + unprocessed_pseudogene KNOWN OTTHUMG00000187925.1 3349 209 2 ENSG00000266013.1 CTD-2206N4.2 chr17 39026715 39027110 - lincRNA NOVEL OTTHUMG00000178953.1 396 294 2 ENSG00000228106.4 RP11-452F19.3 chr1 222815022 222837384 + lincRNA NOVEL OTTHUMG00000037767.4 22363 1069 41 ENSG00000214553.8 LRRC37A11P chr17 39027277 39053205 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000133184.3 25929 5646 17 ENSG00000266048.1 CTD-2206N4.1 chr17 39033926 39034042 - processed_pseudogene KNOWN OTTHUMG00000178952.1 117 117 1 ENSG00000277021.1 AC091178.2 chr17 39047468 39047576 + miRNA NOVEL NA 109 109 1 ENSG00000263818.4 CTD-2206N4.4 chr17 39057019 39113190 + transcribed_processed_pseudogene KNOWN OTTHUMG00000178956.1 56172 4171 14 ENSG00000161381.12 PLXDC1 chr17 39063303 39154394 - protein_coding KNOWN OTTHUMG00000133183.13 91092 9277 158 ENSG00000222494.1 AC091178.1 chr17 39081065 39081187 + miRNA NOVEL NA 123 123 1 ENSG00000141748.11 ARL5C chr17 39156894 39167484 - protein_coding KNOWN OTTHUMG00000179048.5 10591 3418 18 ENSG00000280177.1 RP5-906A24.1 chr17 39165073 39167849 + TEC KNOWN OTTHUMG00000178975.1 2777 2777 1 ENSG00000266101.1 RP5-906A24.2 chr17 39173290 39177503 + antisense NOVEL OTTHUMG00000178976.1 4214 573 2 ENSG00000067191.14 CACNB1 chr17 39173456 39197703 - protein_coding KNOWN OTTHUMG00000133217.4 24248 7094 93 ENSG00000278610.1 RP11-455P21.3 chr1 222815064 222994906 + lincRNA NOVEL OTTHUMG00000186730.1 179843 564 8 ENSG00000108298.8 RPL19 chr17 39200283 39204727 + protein_coding KNOWN OTTHUMG00000178979.5 4445 2368 34 ENSG00000141750.6 STAC2 chr17 39210536 39225872 - protein_coding KNOWN OTTHUMG00000179039.2 15337 3362 22 ENSG00000265460.5 RP11-690G19.4 chr17 39238466 39250818 + transcribed_processed_pseudogene KNOWN OTTHUMG00000179037.4 12353 1294 17 ENSG00000108306.10 FBXL20 chr17 39252644 39402523 - protein_coding KNOWN OTTHUMG00000179002.6 149880 11038 64 ENSG00000265904.1 AC005288.1 chr17 39297405 39297489 - miRNA NOVEL NA 85 85 1 ENSG00000266469.1 CTB-131K11.1 chr17 39401793 39406233 + antisense NOVEL OTTHUMG00000178977.1 4441 860 2 ENSG00000125686.10 MED1 chr17 39404285 39451286 - protein_coding KNOWN OTTHUMG00000133216.3 47002 7330 57 ENSG00000167258.12 CDK12 chr17 39461511 39564907 + protein_coding KNOWN OTTHUMG00000133214.7 103397 12773 62 ENSG00000223091.1 RNU6-981P chr17 39482486 39482590 - snRNA KNOWN NA 105 105 1 ENSG00000222777.1 RNU6-233P chr17 39546104 39546244 - snRNA KNOWN NA 141 141 1 ENSG00000154309.8 DISP1 chr1 222872271 223005995 + protein_coding KNOWN OTTHUMG00000037893.2 133725 5382 14 ENSG00000273576.1 RP11-390P24.1 chr17 39566915 39567559 + lincRNA NOVEL OTTHUMG00000186646.1 645 645 1 ENSG00000171532.4 NEUROD2 chr17 39603536 39609777 - protein_coding KNOWN OTTHUMG00000133211.2 6242 6242 3 ENSG00000214546.3 AC087491.2 chr17 39619613 39622513 + lincRNA NOVEL OTTHUMG00000132690.1 2901 616 4 ENSG00000131771.12 PPP1R1B chr17 39626740 39636626 + protein_coding KNOWN OTTHUMG00000133210.6 9887 4554 54 ENSG00000131748.14 STARD3 chr17 39637065 39663484 + protein_coding KNOWN OTTHUMG00000133213.11 26420 5160 213 ENSG00000173991.5 TCAP chr17 39664187 39666555 + protein_coding KNOWN OTTHUMG00000133215.2 2369 2123 5 ENSG00000141744.3 PNMT chr17 39667981 39670475 + protein_coding KNOWN OTTHUMG00000133209.2 2495 1457 8 ENSG00000161395.11 PGAP3 chr17 39671122 39696797 - protein_coding KNOWN OTTHUMG00000179110.5 25676 3669 71 ENSG00000141736.12 ERBB2 chr17 39687914 39730426 + protein_coding KNOWN OTTHUMG00000179300.2 42513 10321 286 ENSG00000265178.1 MIR4728 chr17 39726495 39726561 + miRNA KNOWN NA 67 67 1 ENSG00000234523.1 NDUFB1P2 chr1 222945725 222945900 + processed_pseudogene KNOWN OTTHUMG00000037892.1 176 176 1 ENSG00000141741.10 MIEN1 chr17 39728496 39730787 - protein_coding KNOWN OTTHUMG00000133252.3 2292 2292 16 ENSG00000141738.12 GRB7 chr17 39737927 39747291 + protein_coding KNOWN OTTHUMG00000133253.4 9365 3597 107 ENSG00000161405.15 IKZF3 chr17 39757715 39864188 - protein_coding KNOWN OTTHUMG00000133250.3 106474 10008 110 ENSG00000264663.1 KRT8P34 chr17 39835037 39836080 - processed_pseudogene KNOWN OTTHUMG00000179518.1 1044 1044 1 ENSG00000226117.1 AC079199.2 chr17 39839369 39839524 - processed_pseudogene KNOWN OTTHUMG00000132688.1 156 156 1 ENSG00000186075.11 ZPBP2 chr17 39868164 39877896 + protein_coding KNOWN OTTHUMG00000133022.2 9733 2295 27 ENSG00000073605.17 GSDMB chr17 39904595 39919854 - protein_coding KNOWN OTTHUMG00000133248.5 15260 5905 103 ENSG00000172057.8 ORMDL3 chr17 39921041 39927601 - protein_coding KNOWN OTTHUMG00000133249.2 6561 3752 29 ENSG00000264968.1 RP11-387H17.4 chr17 39927742 39939601 + lincRNA NOVEL OTTHUMG00000179520.1 11860 965 9 ENSG00000204913.5 LRRC3C chr17 39941474 39944747 + protein_coding KNOWN OTTHUMG00000179521.1 3274 891 2 ENSG00000187554.10 TLR5 chr1 223109406 223143282 - protein_coding KNOWN OTTHUMG00000037937.4 33877 4608 21 ENSG00000167914.9 GSDMA chr17 39962973 39977766 + protein_coding KNOWN OTTHUMG00000179522.1 14794 2230 16 ENSG00000108344.13 PSMD3 chr17 39980797 39997960 + protein_coding KNOWN OTTHUMG00000133251.2 17164 4964 35 ENSG00000265799.1 RP11-387H17.6 chr17 40012226 40014705 - lincRNA NOVEL OTTHUMG00000179523.1 2480 982 5 ENSG00000108342.11 CSF3 chr17 40015361 40017813 + protein_coding KNOWN OTTHUMG00000133247.2 2453 2220 34 ENSG00000008838.16 MED24 chr17 40019097 40061215 - protein_coding KNOWN OTTHUMG00000133329.5 42119 6962 317 ENSG00000275267.1 MIR6884 chr17 40026332 40026409 - miRNA KNOWN NA 78 78 1 ENSG00000238793.1 SNORD124 chr17 40027542 40027645 - snoRNA KNOWN NA 104 104 1 ENSG00000126351.11 THRA chr17 40058290 40093867 + protein_coding KNOWN OTTHUMG00000133332.2 35578 6959 66 ENSG00000126368.5 NR1D1 chr17 40092787 40100725 - protein_coding KNOWN OTTHUMG00000133327.2 7939 2772 8 ENSG00000279199.1 RP11-749I16.3 chr17 40113215 40115442 - TEC KNOWN OTTHUMG00000179628.1 2228 2228 1 ENSG00000253085.1 SCARNA11 chr1 13696070 13696199 - scaRNA NOVEL NA 130 130 1 ENSG00000236846.1 RP11-239E10.2 chr1 223144049 223144954 + lincRNA NOVEL OTTHUMG00000037934.2 906 613 2 ENSG00000188895.10 MSL1 chr17 40122298 40136916 + protein_coding KNOWN OTTHUMG00000179629.3 14619 7397 58 ENSG00000108349.13 CASC3 chr17 40140318 40172183 + protein_coding KNOWN OTTHUMG00000133323.4 31866 6380 49 ENSG00000221555.1 AC068669.1 chr17 40150136 40150222 + miRNA NOVEL NA 87 87 1 ENSG00000108352.10 RAPGEFL1 chr17 40177010 40195656 + protein_coding KNOWN OTTHUMG00000133325.6 18647 5711 106 ENSG00000274621.1 MIR6867 chr17 40193597 40193663 + miRNA KNOWN NA 67 67 1 ENSG00000171475.12 WIPF2 chr17 40219304 40284136 + protein_coding KNOWN OTTHUMG00000133331.3 64833 8123 59 ENSG00000094804.8 CDC6 chr17 40287633 40304657 + protein_coding KNOWN OTTHUMG00000133324.3 17025 5120 23 ENSG00000131759.16 RARA chr17 40309192 40357643 + protein_coding KNOWN OTTHUMG00000133328.3 48452 4731 63 ENSG00000265666.1 RARA-AS1 chr17 40340867 40343136 - antisense NOVEL OTTHUMG00000179631.1 2270 1790 3 ENSG00000278918.1 CTD-2267D19.1 chr17 40348049 40350539 - TEC KNOWN OTTHUMG00000179632.1 2491 2491 1 ENSG00000226601.1 RP11-239E10.3 chr1 223181144 223188154 + lincRNA NOVEL OTTHUMG00000037935.1 7011 487 3 ENSG00000266208.1 CTD-2267D19.3 chr17 40360655 40364693 + antisense NOVEL OTTHUMG00000179633.1 4039 2094 2 ENSG00000183153.6 GJD3 chr17 40362931 40363815 - protein_coding KNOWN OTTHUMG00000179634.1 885 885 1 ENSG00000264655.1 CTD-2267D19.4 chr17 40367952 40368438 + processed_pseudogene KNOWN OTTHUMG00000179635.1 487 487 1 ENSG00000252618.1 RNA5SP441 chr17 40374089 40374176 + rRNA KNOWN NA 88 88 1 ENSG00000278346.1 CTD-2267D19.7 chr17 40380666 40381838 - processed_pseudogene KNOWN OTTHUMG00000187933.1 1173 880 2 ENSG00000131747.13 TOP2A chr17 40388516 40417950 - protein_coding KNOWN OTTHUMG00000155008.2 29435 6437 49 ENSG00000222881.1 Y_RNA chr17 40391232 40391338 - misc_RNA NOVEL NA 107 107 1 ENSG00000240125.1 RP11-58O9.1 chr17 40439467 40439917 - processed_pseudogene KNOWN OTTHUMG00000157840.1 451 451 1 ENSG00000141753.6 IGFBP4 chr17 40443461 40457731 + protein_coding KNOWN OTTHUMG00000133326.1 14271 2200 4 ENSG00000279806.1 RP11-58O9.2 chr17 40473554 40475289 - TEC KNOWN OTTHUMG00000176039.1 1736 1736 1 ENSG00000143502.13 SUSD4 chr1 223220819 223364202 - protein_coding KNOWN OTTHUMG00000037936.4 143384 4710 60 ENSG00000131746.11 TNS4 chr17 40475828 40501597 - protein_coding KNOWN OTTHUMG00000133330.3 25770 4847 22 ENSG00000266088.4 RP5-1028K7.2 chr17 40517026 40527002 + lincRNA NOVEL OTTHUMG00000179655.1 9977 1198 6 ENSG00000126353.3 CCR7 chr17 40553769 40565472 - protein_coding KNOWN OTTHUMG00000133375.3 11704 2508 8 ENSG00000279775.1 RP5-1028K7.1 chr17 40597113 40598585 - TEC KNOWN OTTHUMG00000176041.1 1473 1473 1 ENSG00000073584.17 SMARCE1 chr17 40624962 40648508 - protein_coding KNOWN OTTHUMG00000133367.3 23547 11022 141 ENSG00000264058.1 KRT222 chr17 40628797 40665141 - protein_coding NOVEL OTTHUMG00000179656.1 36345 2502 13 ENSG00000278834.1 RP11-458J1.1 chr17 40648300 40649718 + antisense NOVEL OTTHUMG00000186647.1 1419 1419 1 ENSG00000213424.7 KRT222 chr17 40654665 40665181 - protein_coding KNOWN OTTHUMG00000133374.5 10517 3169 19 ENSG00000271876.1 AC073508.1 chr17 40665624 40665723 + miRNA NOVEL NA 100 100 1 ENSG00000224244.1 AC090283.3 chr17 40687038 40689360 - unprocessed_pseudogene KNOWN OTTHUMG00000137366.1 2323 656 5 ENSG00000251789.2 RNU4-57P chr1 223373822 223373956 + snRNA KNOWN NA 135 135 1 ENSG00000167916.4 KRT24 chr17 40697991 40703750 - protein_coding KNOWN OTTHUMG00000133372.1 5760 1881 8 ENSG00000229028.2 KRT223P chr17 40717235 40721932 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000133585.2 4698 1705 9 ENSG00000204897.6 KRT25 chr17 40748021 40755332 - protein_coding KNOWN OTTHUMG00000133373.1 7312 1670 8 ENSG00000186393.5 KRT26 chr17 40766238 40772162 - protein_coding KNOWN OTTHUMG00000133370.1 5925 1733 8 ENSG00000171446.6 KRT27 chr17 40776808 40782534 - protein_coding KNOWN OTTHUMG00000133371.2 5727 1783 12 ENSG00000173908.8 KRT28 chr17 40792203 40799959 - protein_coding KNOWN OTTHUMG00000133365.2 7757 1685 8 ENSG00000264488.1 RP11-605F20.1 chr17 40803744 40809296 + lincRNA NOVEL OTTHUMG00000179792.1 5553 265 3 ENSG00000186395.6 KRT10 chr17 40818117 40822595 - protein_coding KNOWN OTTHUMG00000133368.2 4479 2124 8 ENSG00000167920.7 TMEM99 chr17 40819106 40836274 + protein_coding KNOWN OTTHUMG00000133579.1 17169 2362 11 ENSG00000265359.1 RP5-1110E20.1 chr17 40850800 40863282 + antisense NOVEL OTTHUMG00000179793.1 12483 258 2 ENSG00000178395.6 CCDC185 chr1 223393417 223395470 + protein_coding KNOWN OTTHUMG00000037987.1 2054 2054 1 ENSG00000187242.4 KRT12 chr17 40861303 40867210 - protein_coding KNOWN OTTHUMG00000133369.2 5908 1867 8 ENSG00000171431.3 KRT20 chr17 40875941 40885227 - protein_coding KNOWN OTTHUMG00000133366.3 9287 1846 10 ENSG00000234477.1 AC004231.2 chr17 40921430 40975926 + antisense NOVEL OTTHUMG00000133678.1 54497 815 4 ENSG00000108244.15 KRT23 chr17 40922696 40937634 - protein_coding KNOWN OTTHUMG00000133376.3 14939 2902 46 ENSG00000196859.6 KRT39 chr17 40958417 40966892 - protein_coding KNOWN OTTHUMG00000133424.2 8476 1936 17 ENSG00000204889.9 KRT40 chr17 40977716 40987135 - protein_coding KNOWN OTTHUMG00000133596.4 9420 2225 25 ENSG00000212899.2 KRTAP3-3 chr17 40993430 40994133 - protein_coding KNOWN OTTHUMG00000133591.1 704 704 1 ENSG00000212900.2 KRTAP3-2 chr17 40999193 40999894 - protein_coding KNOWN OTTHUMG00000133581.1 702 702 1 ENSG00000226776.1 KRTAP3-4P chr17 41004481 41004760 - unprocessed_pseudogene KNOWN OTTHUMG00000133637.1 280 280 1 ENSG00000212901.3 KRTAP3-1 chr17 41008521 41019324 - protein_coding KNOWN OTTHUMG00000133595.2 10804 725 4 ENSG00000203697.10 CAPN8 chr1 223538007 223665734 - protein_coding KNOWN OTTHUMG00000037378.7 127728 5192 79 ENSG00000221852.4 KRTAP1-5 chr17 41026026 41027202 - protein_coding KNOWN OTTHUMG00000133587.1 1177 1177 1 ENSG00000204887.4 KRTAP1-4 chr17 41029697 41030104 - protein_coding KNOWN OTTHUMG00000133631.3 408 408 1 ENSG00000221880.3 KRTAP1-3 chr17 41033884 41034855 - protein_coding KNOWN OTTHUMG00000133583.1 972 972 1 ENSG00000188581.8 KRTAP1-1 chr17 41040559 41041461 - protein_coding KNOWN OTTHUMG00000133592.1 903 903 1 ENSG00000212725.3 KRTAP2-1 chr17 41046541 41047316 - protein_coding KNOWN OTTHUMG00000171405.1 776 776 3 ENSG00000214518.3 KRTAP2-2 chr17 41054498 41055230 - protein_coding KNOWN OTTHUMG00000133593.1 733 733 3 ENSG00000212724.3 KRTAP2-3 chr17 41059240 41060114 - protein_coding KNOWN OTTHUMG00000133655.1 875 875 1 ENSG00000213417.3 KRTAP2-4 chr17 41065116 41065879 - protein_coding KNOWN OTTHUMG00000133594.1 764 764 1 ENSG00000237230.1 KRTAP2-5P chr17 41071946 41072341 + unprocessed_pseudogene KNOWN OTTHUMG00000133635.1 396 396 1 ENSG00000240871.4 KRTAP4-7 chr17 41084150 41106067 + protein_coding KNOWN OTTHUMG00000133582.1 21918 1315 5 ENSG00000227002.2 SNRPEP10 chr1 223644110 223644383 - processed_pseudogene KNOWN OTTHUMG00000037377.2 274 274 1 ENSG00000204880.7 KRTAP4-8 chr17 41096981 41098141 - protein_coding KNOWN OTTHUMG00000133580.1 1161 1161 4 ENSG00000241241.1 KRTAP4-16P chr17 41101502 41102209 - protein_coding PUTATIVE OTTHUMG00000133590.1 708 708 1 ENSG00000212722.7 KRTAP4-9 chr17 41105332 41106488 + protein_coding KNOWN OTTHUMG00000133584.1 1157 1157 4 ENSG00000212721.3 KRTAP4-11 chr17 41117181 41118360 - protein_coding KNOWN OTTHUMG00000133586.1 1180 1180 1 ENSG00000213416.3 KRTAP4-12 chr17 41123091 41124167 - protein_coding KNOWN OTTHUMG00000133632.1 1077 1077 1 ENSG00000198090.3 KRTAP4-6 chr17 41139433 41140487 - protein_coding KNOWN OTTHUMG00000133634.1 1055 1055 1 ENSG00000198271.4 KRTAP4-5 chr17 41148924 41149802 - protein_coding KNOWN OTTHUMG00000133638.1 879 879 1 ENSG00000171396.11 KRTAP4-4 chr17 41159651 41160731 - protein_coding KNOWN OTTHUMG00000133428.2 1081 1081 1 ENSG00000196156.4 KRTAP4-3 chr17 41167231 41168194 - protein_coding KNOWN OTTHUMG00000133639.1 964 964 1 ENSG00000244537.2 KRTAP4-2 chr17 41177446 41178208 - protein_coding KNOWN OTTHUMG00000133437.1 763 763 1 ENSG00000212398.1 RNU6-1248P chr1 223690051 223690114 + snRNA KNOWN NA 64 64 1 ENSG00000198443.6 KRTAP4-1 chr17 41184102 41185342 - protein_coding KNOWN OTTHUMG00000132081.1 1241 1241 3 ENSG00000251439.1 AC006070.12 chr17 41186944 41187136 - unprocessed_pseudogene KNOWN OTTHUMG00000133664.1 193 193 1 ENSG00000239886.4 KRTAP9-2 chr17 41189853 41227652 + protein_coding KNOWN OTTHUMG00000133609.1 37800 1315 9 ENSG00000240542.3 KRTAP9-1 chr17 41189887 41190639 + protein_coding KNOWN OTTHUMG00000133636.1 753 753 1 ENSG00000248807.1 KRTAP9-12P chr17 41212706 41213237 + unprocessed_pseudogene KNOWN OTTHUMG00000133633.1 532 532 1 ENSG00000198083.8 KRTAP9-9 chr17 41226653 41256364 + protein_coding KNOWN OTTHUMG00000133602.1 29712 1042 4 ENSG00000204873.4 KRTAP9-3 chr17 41232463 41233454 + protein_coding KNOWN OTTHUMG00000133427.1 992 992 1 ENSG00000187272.5 KRTAP9-8 chr17 41232475 41239004 + protein_coding KNOWN OTTHUMG00000133604.1 6530 1043 3 ENSG00000241595.2 KRTAP9-4 chr17 41249687 41250653 + protein_coding KNOWN OTTHUMG00000133438.1 967 967 1 ENSG00000212659.1 KRTAP9-6 chr17 41265339 41266641 + protein_coding KNOWN OTTHUMG00000133600.1 1303 1303 1 ENSG00000162909.16 CAPN2 chr1 223701593 223776018 + protein_coding KNOWN OTTHUMG00000037376.3 74426 8792 91 ENSG00000229351.1 KRTAP9-11P chr17 41271311 41271835 + unprocessed_pseudogene KNOWN OTTHUMG00000133608.1 525 525 1 ENSG00000180386.7 KRTAP9-7 chr17 41275659 41276697 + protein_coding KNOWN OTTHUMG00000133605.1 1039 1039 1 ENSG00000237183.1 KRTAP9-10P chr17 41280604 41280810 + unprocessed_pseudogene KNOWN OTTHUMG00000133663.1 207 207 1 ENSG00000212658.1 KRTAP29-1 chr17 41301826 41302851 - protein_coding KNOWN OTTHUMG00000133662.2 1026 1026 1 ENSG00000212657.1 KRTAP16-1 chr17 41307700 41309253 - protein_coding KNOWN OTTHUMG00000133640.1 1554 1554 1 ENSG00000186860.4 KRTAP17-1 chr17 41314917 41315695 - protein_coding KNOWN OTTHUMG00000133433.1 779 779 1 ENSG00000233014.1 TBC1D3P7 chr17 41323427 41329545 + unprocessed_pseudogene KNOWN OTTHUMG00000133669.1 6119 914 8 ENSG00000108516.5 AC003958.6 chr17 41334632 41335733 + unprocessed_pseudogene KNOWN OTTHUMG00000133668.1 1102 421 2 ENSG00000006059.3 KRT33A chr17 41346092 41350812 - protein_coding KNOWN OTTHUMG00000133432.1 4721 1287 7 ENSG00000131738.8 KRT33B chr17 41363494 41397592 - protein_coding KNOWN OTTHUMG00000133429.1 34099 1677 16 ENSG00000143514.15 TP53BP2 chr1 223779899 223845972 - protein_coding KNOWN OTTHUMG00000037379.3 66074 5991 91 ENSG00000131737.5 KRT34 chr17 41377650 41382403 - protein_coding KNOWN OTTHUMG00000133436.3 4754 1751 7 ENSG00000094796.4 KRT31 chr17 41393724 41397592 - protein_coding KNOWN OTTHUMG00000133423.1 3869 1596 7 ENSG00000234859.4 AC003958.2 chr17 41402416 41425049 + antisense NOVEL OTTHUMG00000133598.3 22634 4067 7 ENSG00000225438.1 KRT41P chr17 41406512 41411775 - unprocessed_pseudogene KNOWN OTTHUMG00000133601.1 5264 1293 7 ENSG00000108417.3 KRT37 chr17 41420753 41424523 - protein_coding KNOWN OTTHUMG00000133606.2 3771 1475 7 ENSG00000171360.3 KRT38 chr17 41436446 41440921 - protein_coding KNOWN OTTHUMG00000133439.2 4476 2337 7 ENSG00000236473.1 KRT43P chr17 41448183 41454055 - unprocessed_pseudogene KNOWN OTTHUMG00000133683.1 5873 910 7 ENSG00000108759.3 KRT32 chr17 41459811 41467429 - protein_coding KNOWN OTTHUMG00000133430.1 7619 1750 7 ENSG00000223125.1 RNU2-32P chr17 41467956 41468146 + snRNA KNOWN NA 191 191 1 ENSG00000197079.7 KRT35 chr17 41476689 41481140 - protein_coding KNOWN OTTHUMG00000133425.2 4452 1778 15 ENSG00000198744.5 RP5-857K21.11 chr1 634376 634922 + unprocessed_pseudogene KNOWN OTTHUMG00000002337.2 547 547 1 ENSG00000116731.21 PRDM2 chr1 13700198 13825079 + protein_coding KNOWN OTTHUMG00000007917.5 124882 10923 75 ENSG00000227621.1 PHBP11 chr1 223856579 223857387 - processed_pseudogene KNOWN OTTHUMG00000037468.1 809 809 1 ENSG00000126337.12 KRT36 chr17 41486136 41492546 - protein_coding KNOWN OTTHUMG00000133431.2 6411 1865 15 ENSG00000171401.13 KRT13 chr17 41500981 41505705 - protein_coding KNOWN OTTHUMG00000133434.3 4725 2913 48 ENSG00000229732.1 AC019349.5 chr17 41500983 41502409 + antisense NOVEL OTTHUMG00000133684.1 1427 476 2 ENSG00000171346.12 KRT15 chr17 41513743 41522529 - protein_coding KNOWN OTTHUMG00000133435.4 8787 7069 55 ENSG00000276252.1 MIR6510 chr17 41517164 41517217 - miRNA KNOWN NA 54 54 1 ENSG00000171345.12 KRT19 chr17 41523617 41528308 - protein_coding KNOWN OTTHUMG00000133422.4 4692 2336 25 ENSG00000226629.1 LINC00974 chr17 41549606 41554495 - lincRNA NOVEL OTTHUMG00000133607.1 4890 2141 3 ENSG00000171403.8 KRT9 chr17 41565841 41572058 - protein_coding KNOWN OTTHUMG00000133599.3 6218 2290 17 ENSG00000186847.5 KRT14 chr17 41582279 41586921 - protein_coding KNOWN OTTHUMG00000133426.2 4643 2281 14 ENSG00000186832.7 KRT16 chr17 41609778 41615899 - protein_coding KNOWN OTTHUMG00000133495.2 6122 2475 18 ENSG00000188460.4 ACTBP11 chr1 223863726 223864851 - processed_pseudogene KNOWN OTTHUMG00000037470.2 1126 1126 1 ENSG00000128422.14 KRT17 chr17 41619437 41624842 - protein_coding KNOWN OTTHUMG00000133505.2 5406 2537 40 ENSG00000214514.6 KRT42P chr17 41626327 41640199 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000152412.3 13873 4221 32 ENSG00000278954.1 RP13-415G19.2 chr17 41665566 41668031 + TEC KNOWN OTTHUMG00000179963.1 2466 2466 1 ENSG00000173812.9 EIF1 chr17 41688885 41692668 + protein_coding KNOWN OTTHUMG00000133492.4 3784 3623 23 ENSG00000184502.3 GAST chr17 41712326 41715969 + protein_coding KNOWN OTTHUMG00000133496.1 3644 470 3 ENSG00000173805.14 HAP1 chr17 41717742 41734644 - protein_coding KNOWN OTTHUMG00000133498.2 16903 6223 50 ENSG00000201920.1 RNA5SP442 chr17 41718154 41718260 + rRNA KNOWN NA 107 107 1 ENSG00000239542.3 RN7SL399P chr17 41730127 41730405 - misc_RNA KNOWN NA 279 279 1 ENSG00000173801.15 JUP chr17 41754604 41786931 - protein_coding KNOWN OTTHUMG00000133494.7 32328 4942 79 ENSG00000141696.11 P3H4 chr17 41801947 41812604 - protein_coding KNOWN OTTHUMG00000133501.4 10658 3740 36 ENSG00000233771.2 CICP5 chr1 223947605 223950416 + unprocessed_pseudogene KNOWN OTTHUMG00000037469.2 2812 2215 3 ENSG00000141756.17 FKBP10 chr17 41812680 41823217 + protein_coding KNOWN OTTHUMG00000133497.4 10538 4273 48 ENSG00000141698.15 NT5C3B chr17 41825181 41836263 - protein_coding KNOWN OTTHUMG00000133499.8 11083 2730 107 ENSG00000161594.6 KLHL10 chr17 41835685 41848384 + protein_coding KNOWN OTTHUMG00000152510.3 12700 2370 13 ENSG00000259623.1 RP11-156E6.1 chr17 41848518 41851447 - sense_overlapping NOVEL OTTHUMG00000172022.1 2930 2930 1 ENSG00000178502.5 KLHL11 chr17 41853545 41865431 - protein_coding KNOWN OTTHUMG00000133506.2 11887 2383 2 ENSG00000131473.15 ACLY chr17 41866908 41930542 - protein_coding KNOWN OTTHUMG00000133507.2 63635 5217 158 ENSG00000274630.1 RP11-229E13.4 chr17 41867581 41867736 + antisense NOVEL OTTHUMG00000186648.1 156 156 1 ENSG00000204815.7 TTC25 chr17 41930635 41965651 + protein_coding KNOWN OTTHUMG00000175837.1 35017 2500 45 ENSG00000173786.15 CNP chr17 41966741 41977731 + protein_coding KNOWN OTTHUMG00000133502.5 10991 7426 30 ENSG00000168259.13 DNAJC7 chr17 41976433 42021376 - protein_coding KNOWN OTTHUMG00000180862.3 44944 9373 142 ENSG00000272645.2 RP11-504P24.8 chr1 223951388 223953439 - lincRNA NOVEL OTTHUMG00000185887.2 2052 2052 1 ENSG00000168256.16 NKIRAS2 chr17 42011382 42025644 + protein_coding KNOWN OTTHUMG00000133503.3 14263 5566 52 ENSG00000187595.13 ZNF385C chr17 42025576 42065365 - protein_coding KNOWN OTTHUMG00000132073.4 39790 5128 24 ENSG00000270010.1 CTD-2132N18.4 chr17 42038232 42038734 - sense_intronic NOVEL OTTHUMG00000184125.1 503 503 1 ENSG00000267221.1 CTD-2132N18.2 chr17 42040713 42043117 - sense_intronic NOVEL OTTHUMG00000180103.1 2405 761 2 ENSG00000108771.11 DHX58 chr17 42101404 42112733 - protein_coding KNOWN OTTHUMG00000133493.2 11330 3843 51 ENSG00000108773.9 KAT2A chr17 42113108 42121358 - protein_coding KNOWN OTTHUMG00000133504.3 8251 3769 45 ENSG00000267261.4 CTD-2132N18.3 chr17 42119674 42154916 - protein_coding NOVEL OTTHUMG00000180104.1 35243 1199 18 ENSG00000260325.1 HSPB9 chr17 42121431 42123352 + protein_coding KNOWN OTTHUMG00000133500.1 1922 1922 1 ENSG00000108774.13 RAB5C chr17 42124976 42155044 - protein_coding KNOWN OTTHUMG00000169703.2 30069 2761 39 ENSG00000267658.1 RP11-358B23.1 chr17 42154600 42155972 + lincRNA NOVEL OTTHUMG00000180105.1 1373 425 3 ENSG00000212157.1 RNU6-1319P chr1 223976146 223976249 - snRNA KNOWN NA 104 104 1 ENSG00000089558.7 KCNH4 chr17 42156891 42181278 - protein_coding KNOWN OTTHUMG00000180106.3 24388 3924 34 ENSG00000161610.1 HCRT chr17 42184060 42185452 - protein_coding KNOWN OTTHUMG00000180107.1 1393 577 2 ENSG00000167925.14 GHDC chr17 42188799 42194532 - protein_coding KNOWN OTTHUMG00000180108.1 5734 4019 76 ENSG00000173757.8 STAT5B chr17 42199168 42276707 - protein_coding KNOWN OTTHUMG00000150724.2 77540 6447 48 ENSG00000280295.1 RP11-358B23.6 chr17 42233832 42235469 + TEC KNOWN OTTHUMG00000180109.1 1638 1638 1 ENSG00000267758.1 RP11-358B23.5 chr17 42268587 42269807 + antisense NOVEL OTTHUMG00000180110.1 1221 496 2 ENSG00000236194.3 AC003104.1 chr17 42270517 42272683 - sense_intronic NOVEL OTTHUMG00000132657.3 2167 1496 2 ENSG00000278829.1 RP11-358B23.7 chr17 42272069 42275571 - sense_intronic NOVEL OTTHUMG00000188116.1 3503 819 2 ENSG00000126561.15 STAT5A chr17 42287547 42311943 + protein_coding KNOWN OTTHUMG00000150725.6 24397 5754 112 ENSG00000168610.13 STAT3 chr17 42313324 42388568 - protein_coding KNOWN OTTHUMG00000150645.3 75245 8812 143 ENSG00000232372.1 RP11-504P24.2 chr1 223982754 223988154 - unprocessed_pseudogene KNOWN OTTHUMG00000037471.1 5401 360 4 ENSG00000221020.1 AC107993.1 chr17 42399009 42399091 + miRNA NOVEL NA 83 83 1 ENSG00000177469.12 PTRF chr17 42402452 42423517 - protein_coding KNOWN OTTHUMG00000180137.1 21066 3828 2 ENSG00000238704.1 RNU7-97P chr17 42440198 42440259 - snRNA KNOWN NA 62 62 1 ENSG00000033627.13 ATP6V0A1 chr17 42458844 42522611 + protein_coding KNOWN OTTHUMG00000180238.1 63768 10955 198 ENSG00000264314.1 MIR548AT chr17 42494773 42494830 + miRNA KNOWN NA 58 58 1 ENSG00000267222.1 RP11-194N12.2 chr17 42495867 42496550 + sense_intronic NOVEL OTTHUMG00000181854.1 684 684 1 ENSG00000267632.1 RP11-400F19.18 chr17 42509784 42511519 + sense_intronic NOVEL OTTHUMG00000181855.1 1736 1736 1 ENSG00000265611.1 MIR5010 chr17 42514188 42514307 + miRNA KNOWN NA 120 120 1 ENSG00000267185.1 PTP4A2P1 chr17 42533532 42534009 + processed_pseudogene KNOWN OTTHUMG00000180239.1 478 478 1 ENSG00000108784.8 NAGLU chr17 42536172 42544449 + protein_coding KNOWN OTTHUMG00000180240.1 8278 3004 18 ENSG00000185495.9 RP11-504P24.3 chr1 223992743 224010612 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000037472.2 17870 4349 18 ENSG00000266929.1 RP11-400F19.8 chr17 42536510 42562062 + processed_transcript NOVEL OTTHUMG00000180241.1 25553 594 5 ENSG00000108785.7 HSD17B1P1 chr17 42546764 42548706 + unprocessed_pseudogene KNOWN OTTHUMG00000180242.1 1943 955 6 ENSG00000108786.9 HSD17B1 chr17 42549214 42555213 + protein_coding KNOWN OTTHUMG00000180243.1 6000 5658 22 ENSG00000266962.2 RP11-400F19.6 chr17 42552436 42554748 - antisense NOVEL OTTHUMG00000180244.2 2313 2313 1 ENSG00000068120.13 COASY chr17 42561467 42566277 + protein_coding KNOWN OTTHUMG00000180245.2 4811 4032 61 ENSG00000108788.10 MLX chr17 42567068 42573239 + protein_coding KNOWN OTTHUMG00000180246.1 6172 4259 58 ENSG00000131470.13 PSMC3IP chr17 42572315 42577831 - protein_coding KNOWN OTTHUMG00000180247.2 5517 2573 64 ENSG00000141699.9 FAM134C chr17 42579513 42610623 - protein_coding KNOWN OTTHUMG00000180275.1 31111 5145 68 ENSG00000280183.1 RP11-400F19.12 chr17 42598643 42599177 + TEC KNOWN OTTHUMG00000180276.1 535 535 1 ENSG00000131462.6 TUBG1 chr17 42609676 42615234 + protein_coding KNOWN OTTHUMG00000180277.2 5559 2411 35 ENSG00000278467.1 RP11-504P24.9 chr1 223994262 223995196 + lincRNA NOVEL OTTHUMG00000187048.1 935 573 2 ENSG00000267189.1 ATP5LP7 chr17 42647834 42648143 + processed_pseudogene KNOWN OTTHUMG00000180638.1 310 310 1 ENSG00000267132.1 HMGB3P27 chr17 42648178 42648738 + processed_pseudogene KNOWN OTTHUMG00000180639.1 561 561 1 ENSG00000037042.8 TUBG2 chr17 42659305 42667006 + protein_coding KNOWN OTTHUMG00000180640.1 7702 2772 22 ENSG00000068137.13 PLEKHH3 chr17 42667914 42676994 - protein_coding KNOWN OTTHUMG00000180641.1 9081 4803 80 ENSG00000184451.5 CCR10 chr17 42678889 42683917 - protein_coding KNOWN OTTHUMG00000132301.2 5029 2619 6 ENSG00000267042.1 CTD-3193K9.4 chr17 42679963 42682020 + antisense NOVEL OTTHUMG00000180642.1 2058 542 3 ENSG00000108797.10 CNTNAP1 chr17 42682613 42699814 + protein_coding KNOWN OTTHUMG00000180643.1 17202 6045 52 ENSG00000267765.1 CTD-3193K9.3 chr17 42683187 42699466 - antisense NOVEL OTTHUMG00000180644.1 16280 719 2 ENSG00000108799.11 EZH1 chr17 42700275 42745049 - protein_coding KNOWN OTTHUMG00000180645.1 44775 6988 260 ENSG00000275273.1 MIR6780A chr17 42708084 42708151 - miRNA KNOWN NA 68 68 1 ENSG00000229930.1 RP11-504P24.5 chr1 224030704 224035056 - unprocessed_pseudogene KNOWN OTTHUMG00000037494.1 4353 246 3 ENSG00000239671.1 CTD-3193K9.1 chr17 42714299 42714643 + processed_pseudogene KNOWN OTTHUMG00000157847.1 345 345 1 ENSG00000273650.1 CTD-3193K9.11 chr17 42751289 42751717 - lincRNA NOVEL OTTHUMG00000186649.1 429 429 1 ENSG00000214578.5 HMGN2P15 chr17 42753530 42753799 - processed_pseudogene KNOWN OTTHUMG00000180646.1 270 270 1 ENSG00000197291.7 RAMP2-AS1 chr17 42753914 42761257 - lincRNA NOVEL OTTHUMG00000180647.1 7344 4168 20 ENSG00000131477.9 RAMP2 chr17 42758447 42763041 + protein_coding KNOWN OTTHUMG00000180648.1 4595 1148 21 ENSG00000131475.5 VPS25 chr17 42773436 42779599 + protein_coding KNOWN OTTHUMG00000180649.1 6164 2404 26 ENSG00000126562.15 WNK4 chr17 42780678 42796936 + protein_coding KNOWN OTTHUMG00000180650.1 16259 5089 52 ENSG00000183978.7 COA3 chr17 42795147 42798704 - protein_coding KNOWN OTTHUMG00000180651.1 3558 1922 5 ENSG00000176563.8 CNTD1 chr17 42798792 42811587 + protein_coding KNOWN OTTHUMG00000180652.2 12796 3378 36 ENSG00000126581.11 BECN1 chr17 42810134 42833350 - protein_coding KNOWN OTTHUMG00000180653.3 23217 6414 116 ENSG00000252484.1 RN7SKP49 chr1 224107282 224107541 - misc_RNA KNOWN NA 260 260 1 ENSG00000278447.1 MIR6781 chr17 42823880 42823943 - miRNA KNOWN NA 64 64 1 ENSG00000131467.9 PSME3 chr17 42824385 42843758 + protein_coding KNOWN OTTHUMG00000180654.2 19374 5152 147 ENSG00000131480.7 AOC2 chr17 42844600 42850707 + protein_coding KNOWN OTTHUMG00000180655.1 6108 2657 8 ENSG00000131471.5 AOC3 chr17 42851184 42858130 + protein_coding KNOWN OTTHUMG00000180656.1 6947 4524 26 ENSG00000260105.5 AOC4P chr17 42865922 42874369 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000176596.2 8448 3169 14 ENSG00000213373.6 LINC00671 chr17 42874670 42898704 - lincRNA NOVEL OTTHUMG00000132654.3 24035 2167 15 ENSG00000252039.1 RNU6-287P chr17 42891338 42891435 - snRNA KNOWN NA 98 98 1 ENSG00000131482.8 G6PC chr17 42900797 42913369 + protein_coding KNOWN OTTHUMG00000180657.1 12573 3296 16 ENSG00000212149.1 SNORA40 chr17 42940575 42940702 - snoRNA NOVEL NA 128 128 1 ENSG00000266967.5 AARSD1 chr17 42950526 42964498 - protein_coding KNOWN OTTHUMG00000153515.7 13973 3704 89 ENSG00000252151.1 RNU6-1265P chr1 14124233 14124335 - snRNA KNOWN NA 103 103 1 ENSG00000143756.10 FBXO28 chr1 224114087 224162047 + protein_coding KNOWN OTTHUMG00000037495.2 47961 6044 18 ENSG00000108825.16 PTGES3L-AARSD1 chr17 42950526 42980528 - protein_coding KNOWN OTTHUMG00000180905.1 30003 2383 89 ENSG00000267060.4 PTGES3L chr17 42968088 42980433 - protein_coding KNOWN OTTHUMG00000180906.1 12346 2856 33 ENSG00000267230.1 RP11-376M2.2 chr17 42975689 42977275 - sense_intronic NOVEL OTTHUMG00000180658.1 1587 1587 1 ENSG00000198863.6 RUNDC1 chr17 42980565 42993690 + protein_coding KNOWN OTTHUMG00000180659.1 13126 4757 10 ENSG00000281079.1 AC055866.1 chr17 42993098 42993781 - protein_coding NOVEL NA 684 33 2 ENSG00000131469.11 RPL27 chr17 42998273 43002959 + protein_coding KNOWN OTTHUMG00000180660.2 4687 2026 30 ENSG00000068079.6 IFI35 chr17 43006725 43014456 + protein_coding KNOWN OTTHUMG00000167720.1 7732 1973 31 ENSG00000108828.14 VAT1 chr17 43014605 43025123 - protein_coding KNOWN OTTHUMG00000180816.1 10519 3501 37 ENSG00000108830.9 RND2 chr17 43025241 43032036 + protein_coding KNOWN OTTHUMG00000180817.3 6796 4353 7 ENSG00000012048.18 BRCA1 chr17 43044295 43125483 - protein_coding KNOWN OTTHUMG00000157426.8 81189 8802 327 ENSG00000236773.1 RP11-365O16.1 chr1 224175476 224175706 - processed_pseudogene KNOWN OTTHUMG00000037497.1 231 231 1 ENSG00000240828.1 RPL21P4 chr17 43079302 43079780 + processed_pseudogene KNOWN OTTHUMG00000157434.1 479 479 1 ENSG00000198496.9 NBR2 chr17 43125610 43153671 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000140395.3 28062 2096 18 ENSG00000267681.1 CTD-3199J23.6 chr17 43144956 43145255 + transcribed_processed_pseudogene KNOWN OTTHUMG00000180874.1 300 300 1 ENSG00000267002.1 RP11-242D8.1 chr17 43164183 43170403 - lincRNA NOVEL OTTHUMG00000180875.1 6221 1191 3 ENSG00000267595.1 RP11-242D8.2 chr17 43168170 43168249 - unprocessed_pseudogene KNOWN OTTHUMG00000180876.1 80 80 1 ENSG00000267340.1 RP11-242D8.3 chr17 43169880 43170077 - processed_pseudogene KNOWN OTTHUMG00000180877.1 198 198 1 ENSG00000188554.12 NBR1 chr17 43170481 43211689 + protein_coding KNOWN OTTHUMG00000180878.1 41209 8405 92 ENSG00000184988.7 TMEM106A chr17 43211835 43220041 + protein_coding KNOWN OTTHUMG00000180879.4 8207 3577 57 ENSG00000236383.6 LINC00854 chr17 43216941 43305976 - processed_transcript NOVEL OTTHUMG00000132641.6 89036 3094 53 ENSG00000274585.1 RNU2-1 chr17 43233787 43233977 - snRNA KNOWN NA 191 191 1 ENSG00000143753.11 DEGS1 chr1 224175756 224193441 + protein_coding KNOWN OTTHUMG00000037496.3 17686 2515 15 ENSG00000275616.1 RNU2-1 chr17 43239921 43240111 - snRNA NOVEL NA 191 191 1 ENSG00000273709.1 RNU2-1 chr17 43241180 43241370 - snRNA NOVEL NA 191 191 1 ENSG00000274432.1 RNU2-1 chr17 43245674 43245864 - snRNA NOVEL NA 191 191 1 ENSG00000278048.1 RNU2-1 chr17 43251829 43252019 - snRNA NOVEL NA 191 191 1 ENSG00000276596.1 RNU2-1 chr17 43266633 43266823 - snRNA NOVEL NA 191 191 1 ENSG00000277903.1 RNU2-1 chr17 43271369 43271559 - snRNA NOVEL NA 191 191 1 ENSG00000278774.1 U2 chr17 43273101 43273292 - snRNA NOVEL NA 192 192 1 ENSG00000274862.1 RNU2-1 chr17 43277978 43278168 - snRNA NOVEL NA 191 191 1 ENSG00000274062.1 RNU2-1 chr17 43284139 43284329 - snRNA NOVEL NA 191 191 1 ENSG00000274452.1 U2 chr17 43290291 43290481 - snRNA NOVEL NA 191 191 1 ENSG00000201898.1 SNORA72 chr1 224179641 224179767 + snoRNA NOVEL NA 127 127 1 ENSG00000275219.1 RNU2-1 chr17 43296425 43296615 - snRNA NOVEL NA 191 191 1 ENSG00000278591.1 RNU2-1 chr17 43300041 43300231 - snRNA NOVEL NA 191 191 1 ENSG00000279602.1 CTD-3014M21.1 chr17 43360041 43361361 - TEC KNOWN OTTHUMG00000176042.2 1321 1321 1 ENSG00000188825.12 LINC00910 chr17 43369845 43389199 - lincRNA NOVEL OTTHUMG00000180880.1 19355 6895 22 ENSG00000277084.1 U2 chr17 43387226 43387417 - snRNA NOVEL NA 192 192 1 ENSG00000252882.1 RNU6-1137P chr17 43395993 43396091 - snRNA KNOWN NA 99 99 1 ENSG00000175906.4 ARL4D chr17 43398959 43401137 + protein_coding KNOWN OTTHUMG00000180881.2 2179 1612 2 ENSG00000251763.1 RNU6-470P chr17 43412427 43412530 + snRNA KNOWN NA 104 104 1 ENSG00000267151.3 RP11-100E5.2 chr17 43444707 43451200 + lincRNA NOVEL OTTHUMG00000180882.1 6494 506 2 ENSG00000278547.1 MIR2117 chr17 43444806 43444885 + miRNA KNOWN NA 80 80 1 ENSG00000232628.4 RP11-365O16.3 chr1 224208747 224213279 - sense_intronic NOVEL OTTHUMG00000037537.1 4533 962 4 ENSG00000252279.1 RNU6-406P chr17 43445507 43445613 + snRNA KNOWN NA 107 107 1 ENSG00000252729.1 RNU6-971P chr17 43473585 43473690 + snRNA KNOWN NA 106 106 1 ENSG00000237888.1 AC087650.1 chr17 43476198 43476665 + processed_pseudogene KNOWN OTTHUMG00000132639.1 468 468 1 ENSG00000067596.9 DHX8 chr17 43483865 43544463 + protein_coding KNOWN OTTHUMG00000180883.2 60599 9302 78 ENSG00000175832.11 ETV4 chr17 43527844 43579620 - protein_coding KNOWN OTTHUMG00000180884.1 51777 3607 100 ENSG00000267747.1 RP11-392O1.4 chr17 43544785 43610338 + antisense NOVEL OTTHUMG00000180885.1 65554 561 3 ENSG00000278109.1 Metazoa_SRP chr17 43607436 43607723 - misc_RNA NOVEL NA 288 288 1 ENSG00000005102.11 MEOX1 chr17 43640388 43661954 - protein_coding KNOWN OTTHUMG00000170513.1 21567 2707 11 ENSG00000267440.1 CTC-501O10.1 chr17 43680273 43705884 + lincRNA NOVEL OTTHUMG00000180886.1 25612 549 2 ENSG00000267253.1 RP11-209M4.1 chr17 43718314 43720436 - processed_pseudogene KNOWN OTTHUMG00000180887.1 2123 2123 1 ENSG00000237101.1 RP11-365O16.6 chr1 224219613 224228043 + antisense NOVEL OTTHUMG00000041421.1 8431 1323 3 ENSG00000167941.2 SOST chr17 43753731 43758788 - protein_coding KNOWN OTTHUMG00000180888.1 5058 2300 2 ENSG00000108861.7 DUSP3 chr17 43766121 43778988 - protein_coding KNOWN OTTHUMG00000180889.1 12868 5012 16 ENSG00000231256.6 C17orf105 chr17 43780435 43787612 + protein_coding KNOWN OTTHUMG00000180890.1 7178 3753 10 ENSG00000267604.1 RP5-905N1.2 chr17 43782804 43784682 - antisense NOVEL OTTHUMG00000180891.1 1879 494 3 ENSG00000161647.17 MPP3 chr17 43800799 43833170 - protein_coding KNOWN OTTHUMG00000133838.2 32372 4491 91 ENSG00000161649.11 CD300LG chr17 43847148 43863629 + protein_coding KNOWN OTTHUMG00000181796.1 16482 4745 36 ENSG00000108852.13 MPP2 chr17 43875357 43909711 - protein_coding KNOWN OTTHUMG00000133840.4 34355 6114 182 ENSG00000267166.4 RP11-527L4.5 chr17 43914433 43927388 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000181797.2 12956 3036 11 ENSG00000267496.3 FAM215A chr17 43917209 43917963 + protein_coding KNOWN OTTHUMG00000181798.1 755 755 1 ENSG00000267420.1 RP11-527L4.6 chr17 43927563 43932622 + lincRNA NOVEL OTTHUMG00000181799.1 5060 521 3 ENSG00000143748.16 NVL chr1 224227334 224330387 - protein_coding KNOWN OTTHUMG00000037536.7 103054 4813 227 ENSG00000261514.1 RP11-527L4.2 chr17 43938363 43938959 + lincRNA NOVEL OTTHUMG00000176999.1 597 434 2 ENSG00000108849.6 PPY chr17 43940804 43942468 - protein_coding KNOWN OTTHUMG00000181800.1 1665 987 18 ENSG00000131096.9 PYY chr17 43952738 44004469 - protein_coding KNOWN OTTHUMG00000181801.1 51732 1181 10 ENSG00000161653.9 NAGS chr17 44004546 44009063 + protein_coding KNOWN OTTHUMG00000181802.1 4518 2822 18 ENSG00000091947.8 TMEM101 chr17 44011188 44023946 - protein_coding KNOWN OTTHUMG00000181803.1 12759 3029 30 ENSG00000221044.2 U3 chr17 44025020 44025223 - snoRNA NOVEL NA 204 204 1 ENSG00000161654.8 LSM12 chr17 44034635 44067619 - protein_coding KNOWN OTTHUMG00000181804.1 32985 2811 20 ENSG00000141349.7 G6PC3 chr17 44070735 44076344 + protein_coding KNOWN OTTHUMG00000181805.2 5610 4551 37 ENSG00000108840.14 HDAC5 chr17 44076746 44123702 - protein_coding KNOWN OTTHUMG00000181806.1 46957 7618 126 ENSG00000267638.1 RP11-546M21.6 chr17 44115912 44120595 + antisense NOVEL OTTHUMG00000181807.1 4684 359 3 ENSG00000221406.1 MIR320B2 chr1 224257004 224257141 - miRNA KNOWN NA 138 138 1 ENSG00000274433.1 AC023855.1 chr17 44123539 44123649 - miRNA NOVEL NA 111 111 1 ENSG00000212446.1 RNU6-131P chr17 44135883 44135989 - snRNA KNOWN NA 107 107 1 ENSG00000125319.13 C17orf53 chr17 44141906 44162476 + protein_coding KNOWN OTTHUMG00000181808.1 20571 3005 34 ENSG00000161664.5 ASB16 chr17 44170447 44179083 + protein_coding KNOWN OTTHUMG00000181809.1 8637 2230 13 ENSG00000267080.4 ASB16-AS1 chr17 44175973 44186717 - antisense NOVEL OTTHUMG00000181810.1 10745 2460 16 ENSG00000168591.14 TMUB2 chr17 44186970 44191731 + protein_coding KNOWN OTTHUMG00000181811.1 4762 3511 53 ENSG00000087152.14 ATXN7L3 chr17 44191805 44200113 - protein_coding KNOWN OTTHUMG00000181812.1 8309 5301 81 ENSG00000267394.1 CTB-175E5.7 chr17 44198882 44216565 + antisense NOVEL OTTHUMG00000181813.1 17684 528 2 ENSG00000108312.13 UBTF chr17 44205033 44221626 - protein_coding KNOWN OTTHUMG00000167585.4 16594 6993 185 ENSG00000275107.1 MIR6782 chr17 44207771 44207839 - miRNA KNOWN NA 69 69 1 ENSG00000229742.1 RP11-365O16.5 chr1 224297646 224298600 + processed_pseudogene KNOWN OTTHUMG00000037637.1 955 474 2 ENSG00000260793.2 RP5-882C2.2 chr17 44221401 44223710 + antisense NOVEL OTTHUMG00000176046.2 2310 2012 3 ENSG00000267691.1 SHC1P2 chr17 44228760 44230228 - processed_pseudogene KNOWN OTTHUMG00000181814.1 1469 1469 1 ENSG00000004939.12 SLC4A1 chr17 44248385 44268141 - protein_coding KNOWN OTTHUMG00000156843.1 19757 5287 58 ENSG00000239702.3 RN7SL507P chr17 44290856 44291151 - misc_RNA KNOWN NA 296 296 1 ENSG00000267750.4 RUNDC3A-AS1 chr17 44299574 44315315 - antisense NOVEL OTTHUMG00000132629.2 15742 5403 9 ENSG00000221496.2 U3 chr17 44303965 44304203 + snoRNA NOVEL NA 239 239 1 ENSG00000252628.2 RNU6-453P chr17 44307088 44307172 + snRNA KNOWN NA 85 85 1 ENSG00000108309.11 RUNDC3A chr17 44308413 44318671 + protein_coding KNOWN OTTHUMG00000169259.2 10259 4919 71 ENSG00000013306.14 SLC25A39 chr17 44319625 44324870 - protein_coding KNOWN OTTHUMG00000132628.2 5246 3526 128 ENSG00000267211.1 RP5-1067M6.3 chr17 44328613 44331462 + lincRNA NOVEL OTTHUMG00000181815.1 2850 337 2 ENSG00000206887.1 RNU6-1008P chr1 224305380 224305483 + snRNA KNOWN NA 104 104 1 ENSG00000030582.15 GRN chr17 44345246 44353102 + protein_coding KNOWN OTTHUMG00000181816.1 7857 3520 114 ENSG00000161682.13 FAM171A2 chr17 44353215 44363875 - protein_coding KNOWN OTTHUMG00000132421.3 10661 3592 24 ENSG00000267634.1 RPL7L1P5 chr17 44365014 44365751 - processed_pseudogene KNOWN OTTHUMG00000181817.1 738 738 1 ENSG00000005961.16 ITGA2B chr17 44372180 44389505 - protein_coding KNOWN OTTHUMG00000177935.2 17326 5551 90 ENSG00000186566.10 GPATCH8 chr17 44395284 44503430 - protein_coding KNOWN OTTHUMG00000181818.1 108147 9442 64 ENSG00000240589.3 RN7SL258P chr17 44409059 44409358 - misc_RNA KNOWN NA 300 300 1 ENSG00000180340.6 FZD2 chr17 44557459 44559570 + protein_coding KNOWN OTTHUMG00000181819.1 2112 2112 1 ENSG00000271222.1 RP11-1072C15.7 chr17 44596346 44597344 + processed_pseudogene KNOWN OTTHUMG00000184907.1 999 325 2 ENSG00000267384.3 SMCO4P1 chr17 44645411 44645587 + processed_pseudogene KNOWN OTTHUMG00000181820.1 177 177 1 ENSG00000266979.1 LINC01180 chr17 44646364 44650349 - lincRNA NOVEL OTTHUMG00000181821.1 3986 2025 3 ENSG00000231606.1 RP11-344F13.1 chr1 14221891 14223118 - lincRNA NOVEL OTTHUMG00000002047.1 1228 282 2 ENSG00000143771.10 CNIH4 chr1 224356850 224379459 + protein_coding KNOWN OTTHUMG00000037635.3 22610 5098 32 ENSG00000180336.16 C17orf104 chr17 44656404 44690308 + protein_coding KNOWN OTTHUMG00000153039.3 33905 8609 34 ENSG00000180329.12 CCDC43 chr17 44673069 44689779 - protein_coding KNOWN OTTHUMG00000181822.1 16711 2855 20 ENSG00000267160.1 RP11-1072C15.4 chr17 44673689 44676257 - antisense NOVEL OTTHUMG00000181823.1 2569 2569 1 ENSG00000279879.1 RP11-1072C15.6 chr17 44689858 44693340 + TEC KNOWN OTTHUMG00000181824.1 3483 3483 1 ENSG00000161692.16 DBF4B chr17 44708608 44752264 + protein_coding KNOWN OTTHUMG00000165717.2 43657 7146 77 ENSG00000264251.2 RN7SL819P chr17 44718861 44719130 - misc_RNA KNOWN NA 270 270 1 ENSG00000240305.1 RP11-1072C15.1 chr17 44719760 44720597 - processed_pseudogene KNOWN OTTHUMG00000157853.1 838 838 1 ENSG00000073670.12 ADAM11 chr17 44759031 44781846 + protein_coding KNOWN OTTHUMG00000179038.3 22816 4770 112 ENSG00000267505.1 CTC-296K1.3 chr17 44793199 44794474 + lincRNA NOVEL OTTHUMG00000179859.1 1276 562 2 ENSG00000267405.1 CTC-296K1.4 chr17 44794747 44797783 - lincRNA NOVEL OTTHUMG00000179860.1 3037 587 2 ENSG00000162923.13 WDR26 chr1 224385143 224437033 - protein_coding KNOWN OTTHUMG00000037636.3 51891 10481 68 ENSG00000182963.8 GJC1 chr17 44798448 44830816 - protein_coding KNOWN OTTHUMG00000179861.2 32369 8660 23 ENSG00000131097.5 HIGD1B chr17 44846353 44850480 + protein_coding KNOWN OTTHUMG00000179864.2 4128 861 15 ENSG00000108883.11 EFTUD2 chr17 44849943 44899662 - protein_coding KNOWN OTTHUMG00000179865.2 49720 10375 224 ENSG00000264540.2 RN7SL405P chr17 44883986 44884274 + misc_RNA KNOWN NA 289 289 1 ENSG00000167131.15 CCDC103 chr17 44899142 44905390 + protein_coding KNOWN OTTHUMG00000154264.3 6249 3895 19 ENSG00000214447.4 FAM187A chr17 44899712 44905390 + protein_coding KNOWN OTTHUMG00000154266.1 5679 3459 8 ENSG00000224911.1 AC015936.3 chr17 44903161 44904546 - antisense NOVEL OTTHUMG00000154265.1 1386 504 2 ENSG00000131095.10 GFAP chr17 44905008 44916937 - protein_coding KNOWN OTTHUMG00000179866.2 11930 6086 93 ENSG00000186185.12 KIF18B chr17 44924709 44947711 - protein_coding KNOWN OTTHUMG00000179867.1 23003 4655 48 ENSG00000278223.1 MIR6783 chr17 44934618 44934681 - miRNA KNOWN NA 64 64 1 ENSG00000266618.1 MIR4742 chr1 224398227 224398311 - miRNA KNOWN NA 85 85 1 ENSG00000267334.1 CTD-2534I21.8 chr17 44947912 44948939 + lincRNA NOVEL OTTHUMG00000181864.1 1028 1028 1 ENSG00000131094.3 C1QL1 chr17 44959693 44968071 - protein_coding KNOWN OTTHUMG00000162944.3 8379 1295 2 ENSG00000267788.1 CTD-2534I21.9 chr17 44982514 44982772 + lincRNA NOVEL OTTHUMG00000181886.1 259 259 1 ENSG00000172992.10 DCAKD chr17 45023340 45061109 - protein_coding KNOWN OTTHUMG00000179947.2 37770 2834 37 ENSG00000136448.10 NMT1 chr17 45051610 45109016 + protein_coding KNOWN OTTHUMG00000180003.1 57407 6669 66 ENSG00000200888.1 Y_RNA chr17 45071442 45071543 + misc_RNA NOVEL NA 102 102 1 ENSG00000161714.10 PLCD3 chr17 45108967 45133354 - protein_coding KNOWN OTTHUMG00000168029.5 24388 6740 53 ENSG00000277249.1 MIR6784 chr17 45114367 45114433 - miRNA KNOWN NA 67 67 1 ENSG00000181513.13 ACBD4 chr17 45132600 45144181 + protein_coding KNOWN OTTHUMG00000180111.2 11582 3776 123 ENSG00000276728.1 AC142472.6 chr17 45146730 45148470 - lincRNA NOVEL OTTHUMG00000186651.1 1741 1741 1 ENSG00000143786.6 CNIH3 chr1 224434660 224740549 + protein_coding KNOWN OTTHUMG00000037634.3 305890 6386 66 ENSG00000186834.3 HEXIM1 chr17 45148502 45152101 + protein_coding KNOWN OTTHUMG00000180112.2 3600 3600 1 ENSG00000224505.2 AC002117.1 chr17 45150400 45161510 - antisense NOVEL OTTHUMG00000132571.2 11111 696 4 ENSG00000168517.9 HEXIM2 chr17 45160700 45170040 + protein_coding KNOWN OTTHUMG00000180193.1 9341 2038 27 ENSG00000267288.2 RP13-890H12.2 chr17 45168800 45171584 - antisense NOVEL OTTHUMG00000180194.2 2785 2381 4 ENSG00000267121.4 CTD-2020K17.1 chr17 45190931 45222222 - antisense NOVEL OTTHUMG00000180195.1 31292 3719 12 ENSG00000184922.12 FMNL1 chr17 45221444 45247320 + protein_coding KNOWN OTTHUMG00000180196.2 25877 7576 112 ENSG00000233175.2 CTD-2020K17.3 chr17 45238028 45241734 - antisense NOVEL OTTHUMG00000180197.1 3707 2293 4 ENSG00000233483.2 CTD-2020K17.4 chr17 45245186 45248836 - antisense NOVEL OTTHUMG00000180198.2 3651 1073 8 ENSG00000267278.4 MAP3K14-AS1 chr17 45247925 45268630 + antisense NOVEL OTTHUMG00000180362.1 20706 3775 33 ENSG00000184361.11 SPATA32 chr17 45254393 45262112 - protein_coding KNOWN OTTHUMG00000180363.1 7720 1946 17 ENSG00000229991.1 AKR1B1P1 chr1 224574434 224575389 + processed_pseudogene KNOWN OTTHUMG00000037720.1 956 956 1 ENSG00000006062.12 MAP3K14 chr17 45263121 45317040 - protein_coding KNOWN OTTHUMG00000180364.5 53920 5852 46 ENSG00000199953.1 RNA5SP443 chr17 45327366 45327497 - rRNA KNOWN NA 132 132 1 ENSG00000267446.1 CTB-39G8.2 chr17 45371402 45372057 - lincRNA NOVEL OTTHUMG00000180426.1 656 386 2 ENSG00000159314.10 ARHGAP27 chr17 45393902 45434421 - protein_coding KNOWN OTTHUMG00000166982.5 40520 10426 156 ENSG00000267344.1 CTB-39G8.3 chr17 45396932 45397477 + antisense NOVEL OTTHUMG00000180427.1 546 457 2 ENSG00000264038.1 AC091132.2 chr17 45416813 45416906 - miRNA NOVEL NA 94 94 1 ENSG00000225190.7 PLEKHM1 chr17 45435900 45490749 - protein_coding KNOWN OTTHUMG00000179074.4 54850 9233 88 ENSG00000236234.1 AC091132.1 chr17 45452844 45464065 + antisense NOVEL OTTHUMG00000132554.3 11222 769 4 ENSG00000214425.5 LRRC37A4P chr17 45506741 45550335 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000179212.1 43595 6491 16 ENSG00000278770.1 Metazoa_SRP chr17 45526466 45526746 - misc_RNA NOVEL NA 281 281 1 ENSG00000233384.1 RP11-100E13.1 chr1 224615296 224616220 - antisense NOVEL OTTHUMG00000037718.1 925 403 3 ENSG00000266918.1 RP11-798G7.8 chr17 45531577 45533838 + lincRNA NOVEL OTTHUMG00000181889.1 2262 2262 1 ENSG00000131484.4 RP11-798G7.5 chr17 45533963 45534710 + antisense NOVEL OTTHUMG00000180601.1 748 547 2 ENSG00000267198.1 RP11-798G7.6 chr17 45545804 45563230 + lincRNA NOVEL OTTHUMG00000180602.1 17427 2278 10 ENSG00000267246.1 RP11-798G7.7 chr17 45549781 45558738 - processed_transcript NOVEL OTTHUMG00000180603.1 8958 826 4 ENSG00000266504.1 RP11-798G7.4 chr17 45553710 45559070 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000179213.1 5361 470 4 ENSG00000264070.1 DND1P1 chr17 45585871 45586929 + processed_pseudogene KNOWN OTTHUMG00000178253.1 1059 1059 1 ENSG00000280022.1 RP11-707O23.1 chr17 45592621 45593369 + TEC KNOWN OTTHUMG00000176047.1 749 749 1 ENSG00000263503.1 RP11-707O23.5 chr17 45600869 45602340 - processed_pseudogene KNOWN OTTHUMG00000178260.1 1472 1472 1 ENSG00000204652.6 RPS26P8 chr17 45608571 45608918 + processed_pseudogene KNOWN OTTHUMG00000132555.1 348 348 1 ENSG00000204650.12 CRHR1-IT1 chr17 45620328 45648216 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000132521.5 27889 8638 41 ENSG00000234247.1 RP11-100E13.3 chr1 224661173 224661886 - processed_pseudogene KNOWN OTTHUMG00000037721.1 714 714 1 ENSG00000263715.5 RP11-105N13.4 chr17 45621908 45816543 + processed_transcript NOVEL OTTHUMG00000178270.2 194636 634 9 ENSG00000273917.1 AC126544.1 chr17 45637110 45637206 + miRNA NOVEL NA 97 97 1 ENSG00000265547.1 RP11-293E1.2 chr17 45731703 45732977 - lincRNA NOVEL OTTHUMG00000178244.1 1275 517 2 ENSG00000265964.1 RP11-293E1.1 chr17 45733353 45734669 - lincRNA NOVEL OTTHUMG00000178245.1 1317 560 2 ENSG00000120088.13 CRHR1 chr17 45784280 45835828 + protein_coding KNOWN OTTHUMG00000178271.7 51549 3285 130 ENSG00000264589.1 MAPT-AS1 chr17 45843651 45895600 - antisense NOVEL OTTHUMG00000178246.3 51950 1619 6 ENSG00000185294.6 SPPL2C chr17 45844835 45847072 + protein_coding KNOWN OTTHUMG00000178247.1 2238 2238 1 ENSG00000186868.14 MAPT chr17 45894382 46028334 + protein_coding KNOWN OTTHUMG00000168833.4 133953 14920 163 ENSG00000279685.2 MAPT-IT1 chr17 45895783 45898798 + sense_intronic KNOWN OTTHUMG00000177993.2 3016 3016 1 ENSG00000262881.1 RP11-669E14.4 chr17 45907670 45910779 - antisense NOVEL OTTHUMG00000178025.1 3110 759 2 ENSG00000229400.1 RP11-3L21.2 chr1 224717504 224730662 - antisense NOVEL OTTHUMG00000037717.1 13159 837 3 ENSG00000274883.1 Metazoa_SRP chr17 45931806 45932083 + misc_RNA NOVEL NA 278 278 1 ENSG00000256762.1 STH chr17 45999250 45999694 + protein_coding KNOWN OTTHUMG00000168633.1 445 445 1 ENSG00000120071.11 KANSL1 chr17 46029916 46225374 - protein_coding KNOWN OTTHUMG00000178026.3 195459 13928 117 ENSG00000262372.1 RP11-669E14.6 chr17 46035313 46035770 + antisense NOVEL OTTHUMG00000178027.1 458 304 2 ENSG00000280985.1 AC217773.1 chr17 46172089 46172239 - miRNA NOVEL NA 151 151 1 ENSG00000214401.4 KANSL1-AS1 chr17 46193576 46196723 + antisense NOVEL OTTHUMG00000178028.2 3148 976 5 ENSG00000238723.1 Y_RNA chr17 46215070 46215171 - misc_RNA NOVEL NA 102 102 1 ENSG00000262500.1 RP11-259G18.2 chr17 46243606 46245044 + processed_pseudogene KNOWN OTTHUMG00000178029.1 1439 1439 1 ENSG00000262539.1 RP11-259G18.3 chr17 46259551 46260606 - processed_pseudogene KNOWN OTTHUMG00000178030.1 1056 1056 1 ENSG00000261575.2 RP11-259G18.1 chr17 46267037 46268694 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000176050.2 1658 674 3 ENSG00000251933.1 AL596330.1 chr1 224722467 224722541 + miRNA NOVEL NA 75 75 1 ENSG00000228696.7 ARL17B chr17 46274784 46361797 - protein_coding KNOWN OTTHUMG00000178031.1 87014 4219 36 ENSG00000176681.13 LRRC37A chr17 46292733 46337794 + protein_coding KNOWN OTTHUMG00000149841.4 45062 6506 40 ENSG00000265411.1 RN7SL656P chr17 46319679 46319959 + misc_RNA KNOWN NA 281 281 1 ENSG00000260075.1 NSFP1 chr17 46372855 46487141 + unprocessed_pseudogene KNOWN OTTHUMG00000177127.5 114287 1471 13 ENSG00000266497.1 RP11-995C19.2 chr17 46503946 46509339 + unprocessed_pseudogene KNOWN OTTHUMG00000179214.1 5394 470 4 ENSG00000238083.6 LRRC37A2 chr17 46511511 46555650 + protein_coding KNOWN OTTHUMG00000178032.2 44140 6756 35 ENSG00000185829.14 ARL17A chr17 46516702 46579722 - protein_coding KNOWN OTTHUMG00000132817.3 63021 6845 28 ENSG00000265315.1 RN7SL199P chr17 46537534 46537814 + misc_RNA KNOWN NA 281 281 1 ENSG00000280583.1 AC138645.1 chr17 46537734 46537813 + miRNA NOVEL NA 80 80 1 ENSG00000232300.1 FAM215B chr17 46558830 46562795 - lincRNA NOVEL OTTHUMG00000190258.1 3966 2183 2 ENSG00000225334.1 RP11-449J1.1 chr1 224766900 224773341 + antisense NOVEL OTTHUMG00000037716.1 6442 423 2 ENSG00000073969.17 NSF chr17 46590669 46757464 + protein_coding KNOWN OTTHUMG00000134315.5 166796 5005 73 ENSG00000213326.4 RPS7P11 chr17 46721582 46722167 - processed_pseudogene KNOWN OTTHUMG00000157855.2 586 586 1 ENSG00000108379.8 WNT3 chr17 46762506 46833154 - protein_coding KNOWN OTTHUMG00000178076.1 70649 4334 14 ENSG00000158955.9 WNT9B chr17 46833201 46886730 + protein_coding KNOWN OTTHUMG00000178077.1 53530 3313 12 ENSG00000262031.1 RP11-63A1.2 chr17 46909742 46911512 - lincRNA NOVEL OTTHUMG00000178078.1 1771 494 2 ENSG00000261886.1 RP11-63A1.1 chr17 46916770 46923034 - lincRNA NOVEL OTTHUMG00000178079.1 6265 395 3 ENSG00000210709.1 RNU6ATAC3P chr17 46921124 46921249 + snRNA KNOWN NA 126 126 1 ENSG00000108433.14 GOSR2 chr17 46923117 46967019 + protein_coding KNOWN OTTHUMG00000178080.2 43903 5285 48 ENSG00000262633.1 RP11-156P1.2 chr17 46923133 47047154 + protein_coding NOVEL OTTHUMG00000178081.1 124022 889 10 ENSG00000280158.1 RP11-63A1.4 chr17 46939155 46939860 - TEC KNOWN OTTHUMG00000178186.1 706 706 1 ENSG00000234593.1 RP4-704D23.1 chr1 14348955 14351023 - lincRNA NOVEL OTTHUMG00000002044.1 2069 579 2 ENSG00000185842.13 DNAH14 chr1 224896262 225399292 + protein_coding KNOWN OTTHUMG00000037447.7 503031 19693 348 ENSG00000264999.1 MIR5089 chr17 46973017 46973100 + miRNA KNOWN NA 84 84 1 ENSG00000179673.4 RPRML chr17 46978156 46979248 - protein_coding KNOWN OTTHUMG00000178187.1 1093 1093 1 ENSG00000263142.4 LRRC37A17P chr17 46978481 47054569 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000178082.1 76089 5074 13 ENSG00000262879.4 RP11-156P1.3 chr17 46984045 47100323 - processed_transcript NOVEL OTTHUMG00000178188.1 116279 3348 37 ENSG00000277198.1 Metazoa_SRP chr17 47041825 47042105 + misc_RNA NOVEL NA 281 281 1 ENSG00000281864.1 AC068152.1 chr17 47042025 47042104 + miRNA NOVEL NA 80 80 1 ENSG00000004897.10 CDC27 chr17 47117703 47189422 - protein_coding KNOWN OTTHUMG00000166429.6 71720 6824 164 ENSG00000221016.1 AC002558.1 chr17 47118502 47118591 + miRNA NOVEL NA 90 90 1 ENSG00000239291.1 RP5-867C24.1 chr17 47159191 47159993 - processed_pseudogene KNOWN OTTHUMG00000157875.1 803 803 1 ENSG00000262265.1 RP5-867C24.4 chr17 47161075 47162064 - sense_intronic NOVEL OTTHUMG00000178230.1 990 401 2 ENSG00000143815.13 LBR chr1 225401502 225428925 - protein_coding KNOWN OTTHUMG00000037520.13 27424 5257 44 ENSG00000261872.1 RP5-867C24.5 chr17 47169826 47171049 + antisense NOVEL OTTHUMG00000178231.1 1224 673 2 ENSG00000198336.8 MYL4 chr17 47200446 47223679 + protein_coding KNOWN OTTHUMG00000178232.1 23234 1636 61 ENSG00000259207.6 ITGB3 chr17 47253846 47311816 + protein_coding KNOWN OTTHUMG00000171956.5 57971 4394 26 ENSG00000259753.1 RP11-290H9.2 chr17 47253897 47344292 + protein_coding NOVEL OTTHUMG00000171957.3 90396 2785 18 ENSG00000238419.1 RNU7-186P chr17 47259358 47259420 - snRNA KNOWN NA 63 63 1 ENSG00000276790.1 RP11-290H9.5 chr17 47279526 47280047 - antisense NOVEL OTTHUMG00000186652.1 522 522 1 ENSG00000263293.2 RP11-290H9.4 chr17 47303460 47323613 - antisense NOVEL OTTHUMG00000178233.2 20154 713 5 ENSG00000178852.14 EFCAB13 chr17 47323290 47441312 + protein_coding KNOWN OTTHUMG00000164767.5 118023 6672 107 ENSG00000253347.1 CTD-2026D20.2 chr17 47409322 47423526 - antisense NOVEL OTTHUMG00000164768.1 14205 513 2 ENSG00000228782.6 CTD-2026D20.3 chr17 47450568 47492492 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000178238.2 41925 2098 21 ENSG00000234476.1 RP11-496N12.6 chr1 225447243 225465343 - sense_intronic NOVEL OTTHUMG00000037519.1 18101 992 4 ENSG00000141279.14 NPEPPS chr17 47522942 47623276 + protein_coding KNOWN OTTHUMG00000165471.5 100335 11514 192 ENSG00000206734.1 Y_RNA chr17 47557413 47557514 + misc_RNA NOVEL NA 102 102 1 ENSG00000263766.4 RP11-580I16.2 chr17 47603860 47649420 - antisense NOVEL OTTHUMG00000178284.1 45561 1242 13 ENSG00000108424.8 KPNB1 chr17 47649476 47685505 + protein_coding KNOWN OTTHUMG00000036957.3 36030 7678 125 ENSG00000264558.1 RP11-138C9.1 chr17 47682417 47682683 - antisense NOVEL OTTHUMG00000178285.1 267 267 1 ENSG00000198933.8 TBKBP1 chr17 47694081 47712050 + protein_coding KNOWN OTTHUMG00000178286.1 17970 4280 25 ENSG00000073861.2 TBX21 chr17 47733244 47746119 + protein_coding KNOWN OTTHUMG00000178287.1 12876 2614 8 ENSG00000006025.10 OSBPL7 chr17 47807372 47821834 - protein_coding KNOWN OTTHUMG00000178288.1 14463 6572 128 ENSG00000159111.11 MRPL10 chr17 47823272 47831534 - protein_coding KNOWN OTTHUMG00000156302.1 8263 2764 30 ENSG00000141294.8 LRRC46 chr17 47831627 47837713 + protein_coding KNOWN OTTHUMG00000178289.1 6087 2820 32 ENSG00000154380.15 ENAH chr1 225486835 225653142 - protein_coding KNOWN OTTHUMG00000037742.8 166308 14818 62 ENSG00000141295.12 SCRN2 chr17 47837692 47841333 - protein_coding KNOWN OTTHUMG00000178290.1 3642 3043 65 ENSG00000189120.4 SP6 chr17 47844908 47855874 - protein_coding KNOWN OTTHUMG00000132067.3 10967 4075 4 ENSG00000264243.1 RP11-6N17.1 chr17 47863342 47865190 + lincRNA NOVEL OTTHUMG00000178291.1 1849 816 2 ENSG00000266821.1 RP11-6N17.2 chr17 47879472 47882398 - lincRNA NOVEL OTTHUMG00000178292.1 2927 2927 1 ENSG00000264920.1 RP11-6N17.4 chr17 47891255 47895812 - processed_transcript NOVEL OTTHUMG00000178293.1 4558 4286 6 ENSG00000167182.12 SP2 chr17 47896150 47928957 + protein_coding KNOWN OTTHUMG00000150196.1 32808 3184 11 ENSG00000234494.6 SP2-AS1 chr17 47897330 47941410 - antisense NOVEL OTTHUMG00000132519.4 44081 2531 13 ENSG00000266601.1 RP11-6N17.3 chr17 47929682 47933106 - antisense NOVEL OTTHUMG00000178294.1 3425 335 3 ENSG00000108439.8 PNPO chr17 47941506 47948288 + protein_coding KNOWN OTTHUMG00000178295.1 6783 2861 42 ENSG00000263798.1 RP11-6N17.9 chr17 47945424 47974438 + processed_transcript NOVEL OTTHUMG00000178681.1 29015 575 8 ENSG00000227496.1 RP11-145A3.1 chr1 225700604 225752243 + antisense NOVEL OTTHUMG00000037739.1 51640 1530 3 ENSG00000264019.1 RP11-6N17.6 chr17 47946802 47948275 - antisense NOVEL OTTHUMG00000178296.1 1474 527 4 ENSG00000167183.2 PRR15L chr17 47951967 47957878 - protein_coding KNOWN OTTHUMG00000178297.1 5912 1519 2 ENSG00000108465.13 CDK5RAP3 chr17 47967810 47981774 + protein_coding KNOWN OTTHUMG00000178682.2 13965 6070 250 ENSG00000264701.1 RP11-6N17.10 chr17 47980398 47996196 - antisense NOVEL OTTHUMG00000178683.1 15799 531 2 ENSG00000005243.8 COPZ2 chr17 48026167 48038030 - protein_coding KNOWN OTTHUMG00000178684.3 11864 1851 51 ENSG00000207947.2 MIR152 chr17 48037154 48037262 - miRNA KNOWN NA 109 109 1 ENSG00000263412.1 RP5-890E16.2 chr17 48045141 48048073 - processed_transcript NOVEL OTTHUMG00000178705.1 2933 2933 3 ENSG00000082641.14 NFE2L1 chr17 48048329 48061487 + protein_coding KNOWN OTTHUMG00000178706.2 13159 5825 82 ENSG00000273862.1 AC004477.1 chr17 48048365 48048430 + miRNA NOVEL NA 66 66 1 ENSG00000266341.1 RP5-890E16.4 chr17 48060383 48060669 - antisense NOVEL OTTHUMG00000178707.1 287 192 2 ENSG00000226349.1 RP11-145A3.2 chr1 225710968 225736274 - sense_intronic NOVEL OTTHUMG00000037740.1 25307 534 3 ENSG00000278765.1 RP5-890E16.5 chr17 48066704 48067293 - lincRNA NOVEL OTTHUMG00000186653.1 590 590 1 ENSG00000108468.13 CBX1 chr17 48070052 48101521 - protein_coding KNOWN OTTHUMG00000150417.3 31470 3087 30 ENSG00000206954.1 RNU6-1201P chr17 48088678 48088784 - snRNA KNOWN NA 107 107 1 ENSG00000002919.13 SNX11 chr17 48103357 48123074 + protein_coding KNOWN OTTHUMG00000178822.1 19718 3606 79 ENSG00000141293.14 SKAP1 chr17 48133440 48430275 - protein_coding KNOWN OTTHUMG00000178823.1 296836 2648 63 ENSG00000221739.1 MIR1203 chr17 48156427 48156511 - miRNA KNOWN NA 85 85 1 ENSG00000263787.1 RP11-456D7.1 chr17 48185938 48204529 + antisense NOVEL OTTHUMG00000178825.1 18592 687 3 ENSG00000207306.1 RNU6-1152P chr17 48196680 48196786 - snRNA KNOWN NA 107 107 1 ENSG00000235300.4 AC090627.1 chr17 48294335 48308762 + antisense NOVEL OTTHUMG00000132087.3 14428 1570 11 ENSG00000266222.1 RP11-433M22.1 chr17 48377262 48380370 - sense_intronic NOVEL OTTHUMG00000178826.1 3109 333 2 ENSG00000223306.2 RNU6-1304P chr1 225741275 225741380 + snRNA KNOWN NA 106 106 1 ENSG00000280959.1 ACEA_U3 chr17 48382370 48382586 - snoRNA NOVEL NA 217 217 1 ENSG00000200538.2 U3 chr17 48382371 48382586 - snoRNA NOVEL NA 216 216 1 ENSG00000264451.1 RP11-433M22.2 chr17 48460370 48466040 + lincRNA NOVEL OTTHUMG00000178827.1 5671 701 2 ENSG00000206805.1 Y_RNA chr17 48479097 48479198 + misc_RNA NOVEL NA 102 102 1 ENSG00000120094.6 HOXB1 chr17 48528526 48530997 - protein_coding KNOWN OTTHUMG00000159929.3 2472 2472 3 ENSG00000173917.10 HOXB2 chr17 48540894 48544989 - protein_coding KNOWN OTTHUMG00000159930.4 4096 2336 6 ENSG00000230148.7 HOXB-AS1 chr17 48543551 48551250 + antisense KNOWN OTTHUMG00000132491.5 7700 1559 19 ENSG00000120093.10 HOXB3 chr17 48548870 48604912 - protein_coding KNOWN OTTHUMG00000159922.3 56043 7456 46 ENSG00000233101.9 HOXB-AS3 chr17 48549630 48606414 + antisense KNOWN OTTHUMG00000159919.3 56785 1913 46 ENSG00000239552.2 HOXB-AS2 chr17 48557262 48560333 + antisense NOVEL OTTHUMG00000159921.2 3072 845 2 ENSG00000143742.11 SRP9 chr1 225777813 225790466 + protein_coding KNOWN OTTHUMG00000037738.1 12654 1728 17 ENSG00000182742.5 HOXB4 chr17 48575513 48580111 - protein_coding KNOWN OTTHUMG00000159920.2 4599 3757 2 ENSG00000257178.3 RP11-357H14.16 chr17 48579630 48582259 - sense_intronic NOVEL OTTHUMG00000170223.1 2630 2630 1 ENSG00000274592.1 MIR10A chr17 48579838 48579947 - miRNA KNOWN NA 110 110 1 ENSG00000120075.5 HOXB5 chr17 48591257 48593961 - protein_coding KNOWN OTTHUMG00000159913.2 2705 2041 2 ENSG00000108511.9 HOXB6 chr17 48595751 48604992 - protein_coding KNOWN OTTHUMG00000159912.5 9242 2604 11 ENSG00000260027.4 HOXB7 chr17 48607227 48633572 - protein_coding KNOWN OTTHUMG00000170231.4 26346 1528 6 ENSG00000120068.6 HOXB8 chr17 48611377 48614939 - protein_coding KNOWN OTTHUMG00000159904.3 3563 2051 6 ENSG00000170689.9 HOXB9 chr17 48621159 48626356 - protein_coding KNOWN OTTHUMG00000159907.3 5198 2581 2 ENSG00000242207.1 HOXB-AS4 chr17 48628675 48634932 + antisense NOVEL OTTHUMG00000159902.1 6258 669 4 ENSG00000210741.1 MIR196A1 chr17 48632490 48632559 - miRNA KNOWN NA 70 70 1 ENSG00000234112.2 RP11-145A3.4 chr1 225803148 225803448 + processed_pseudogene KNOWN OTTHUMG00000037741.2 301 301 1 ENSG00000272763.1 RP11-357H14.17 chr17 48635923 48647023 - lincRNA NOVEL OTTHUMG00000185832.1 11101 1596 7 ENSG00000244649.3 CTD-2377D24.6 chr17 48646923 48707346 + lincRNA NOVEL OTTHUMG00000159905.3 60424 3858 24 ENSG00000244559.1 CTD-2377D24.2 chr17 48690481 48690624 - processed_pseudogene KNOWN OTTHUMG00000157877.1 144 144 1 ENSG00000242067.1 RPL9P28 chr17 48691116 48691694 - processed_pseudogene KNOWN OTTHUMG00000157876.1 579 579 1 ENSG00000241788.2 COX6B1P2 chr17 48713730 48713959 + processed_pseudogene KNOWN OTTHUMG00000159901.2 230 230 1 ENSG00000159182.4 PRAC1 chr17 48721719 48722522 - protein_coding KNOWN OTTHUMG00000159899.2 804 386 2 ENSG00000229637.3 PRAC2 chr17 48723168 48724758 + protein_coding KNOWN OTTHUMG00000132085.3 1591 657 4 ENSG00000273750.1 HOXB13-AS1_1 chr17 48723188 48723314 + misc_RNA NOVEL NA 127 127 1 ENSG00000277542.1 HOXB13-AS1_2 chr17 48723692 48723772 + misc_RNA NOVEL NA 81 81 1 ENSG00000263602.1 MIR3185 chr17 48724408 48724475 - miRNA KNOWN NA 68 68 1 ENSG00000143819.11 EPHX1 chr1 225810092 225845563 + protein_coding KNOWN OTTHUMG00000037743.3 35472 2508 37 ENSG00000159184.7 HOXB13 chr17 48724763 48729178 - protein_coding KNOWN OTTHUMG00000159900.3 4416 3467 2 ENSG00000242407.1 CTD-2377D24.4 chr17 48733091 48733888 + lincRNA NOVEL OTTHUMG00000159903.1 798 532 2 ENSG00000170703.14 TTLL6 chr17 48762235 48817214 - protein_coding KNOWN OTTHUMG00000156978.4 54980 5097 81 ENSG00000244514.3 RN7SL125P chr17 48765554 48765847 - misc_RNA KNOWN NA 294 294 1 ENSG00000136436.13 CALCOCO2 chr17 48830988 48866522 + protein_coding KNOWN OTTHUMG00000160505.5 35535 8333 155 ENSG00000248278.1 SUMO2P17 chr17 48874860 48908983 - transcribed_processed_pseudogene KNOWN OTTHUMG00000160509.2 34124 897 5 ENSG00000212565.1 SNORA68 chr17 48880840 48880967 + snoRNA NOVEL NA 128 128 1 ENSG00000248895.1 RP11-463M16.5 chr17 48881122 48881316 + processed_pseudogene KNOWN OTTHUMG00000160510.1 195 195 1 ENSG00000159199.12 ATP5G1 chr17 48892765 48895871 + protein_coding KNOWN OTTHUMG00000160520.4 3107 2615 39 ENSG00000270781.1 RP11-501C14.9 chr17 48899131 48899748 + processed_pseudogene KNOWN OTTHUMG00000184905.1 618 301 2 ENSG00000189337.14 KAZN chr1 14598704 15118043 + protein_coding KNOWN OTTHUMG00000002042.5 519340 12644 60 ENSG00000242861.1 RP11-285F7.2 chr1 225840883 225846522 - antisense NOVEL OTTHUMG00000041221.1 5640 348 2 ENSG00000159202.16 UBE2Z chr17 48908369 48929056 + protein_coding KNOWN OTTHUMG00000150521.5 20688 5753 36 ENSG00000159210.8 SNF8 chr17 48929316 48945117 - protein_coding KNOWN OTTHUMG00000160569.4 15802 5270 89 ENSG00000230532.1 AC091133.1 chr17 48931791 48937100 + antisense NOVEL OTTHUMG00000132443.1 5310 483 3 ENSG00000200903.1 RNU1-42P chr17 48949361 48949520 - snRNA KNOWN NA 160 160 1 ENSG00000238804.1 snoU13 chr17 48956650 48956753 - snoRNA NOVEL NA 104 104 1 ENSG00000159224.4 GIP chr17 48958554 48968596 - protein_coding KNOWN OTTHUMG00000161171.1 10043 716 6 ENSG00000250838.1 RP11-501C14.5 chr17 48995266 48997492 - antisense NOVEL OTTHUMG00000161174.1 2227 428 3 ENSG00000159217.8 IGF2BP1 chr17 48997412 49055650 + protein_coding KNOWN OTTHUMG00000161173.1 58239 9109 45 ENSG00000251461.3 RP11-501C14.6 chr17 49004731 49013725 - antisense NOVEL OTTHUMG00000161175.3 8995 432 4 ENSG00000255851.2 Metazoa_SRP chr17 49017793 49018061 - misc_RNA NOVEL NA 269 269 1 ENSG00000196187.10 TMEM63A chr1 225845536 225882369 - protein_coding KNOWN OTTHUMG00000037442.3 36834 10339 55 ENSG00000252636.1 RNU6-826P chr17 49036352 49036455 + snRNA KNOWN NA 104 104 1 ENSG00000251550.1 RP11-501C14.7 chr17 49037122 49037429 + processed_pseudogene KNOWN OTTHUMG00000161237.1 308 308 1 ENSG00000264552.1 AC105030.1 chr17 49049540 49049624 + miRNA NOVEL NA 85 85 1 ENSG00000248883.2 B4GALNT2P1 chr17 49085511 49086702 + unprocessed_pseudogene KNOWN OTTHUMG00000161236.2 1192 307 2 ENSG00000167080.7 B4GALNT2 chr17 49132460 49176840 + protein_coding KNOWN OTTHUMG00000161307.2 44381 8961 33 ENSG00000240995.2 RP11-708H21.1 chr17 49148339 49149111 - processed_pseudogene KNOWN OTTHUMG00000157878.2 773 468 2 ENSG00000167083.5 GNGT2 chr17 49202791 49210574 - protein_coding KNOWN OTTHUMG00000161308.1 7784 1689 23 ENSG00000108798.7 ABI3 chr17 49210227 49223225 + protein_coding KNOWN OTTHUMG00000161306.2 12999 2456 24 ENSG00000173868.10 PHOSPHO1 chr17 49223362 49230766 - protein_coding KNOWN OTTHUMG00000161305.3 7405 2375 21 ENSG00000177369.7 FLJ40194 chr17 49248239 49258662 + processed_transcript NOVEL OTTHUMG00000161323.1 10424 2567 9 ENSG00000243709.1 LEFTY1 chr1 225886282 225911382 - protein_coding KNOWN OTTHUMG00000037443.3 25101 1891 6 ENSG00000273500.1 MIR6129 chr17 49288346 49288454 - miRNA KNOWN NA 109 109 1 ENSG00000198740.7 ZNF652 chr17 49289206 49362473 - protein_coding KNOWN OTTHUMG00000161322.2 73268 8810 22 ENSG00000281414.1 U7 chr17 49325840 49325901 - snRNA NOVEL NA 62 62 1 ENSG00000248714.5 RP11-1079K10.3 chr17 49361165 49369998 + lincRNA NOVEL OTTHUMG00000161365.1 8834 881 9 ENSG00000262039.1 RP11-81K2.1 chr17 49370740 49476988 + antisense NOVEL OTTHUMG00000177919.1 106249 382 3 ENSG00000250948.1 RP11-1079K10.2 chr17 49375380 49380094 + antisense NOVEL OTTHUMG00000161364.1 4715 245 2 ENSG00000186244.7 RP11-1079K10.1 chr17 49400429 49400800 - processed_pseudogene KNOWN OTTHUMG00000157879.1 372 372 1 ENSG00000167085.10 PHB chr17 49404049 49414905 - protein_coding KNOWN OTTHUMG00000134271.9 10857 3838 79 ENSG00000250186.3 RP11-1079K10.4 chr17 49404081 49405197 + antisense NOVEL OTTHUMG00000161492.2 1117 963 2 ENSG00000281126.1 AC091180.1 chr17 49408209 49408427 + protein_coding NOVEL NA 219 51 2 ENSG00000255835.1 RP4-559A3.7 chr1 225886696 225924278 - protein_coding PUTATIVE OTTHUMG00000168659.1 37583 1625 8 ENSG00000207127.1 Y_RNA chr17 49416744 49416850 - misc_RNA NOVEL NA 107 107 1 ENSG00000229944.3 EIF4EP2 chr17 49424269 49424922 - processed_pseudogene KNOWN OTTHUMG00000132439.1 654 654 1 ENSG00000249497.1 RP11-1079K10.5 chr17 49457861 49461749 - lincRNA NOVEL OTTHUMG00000161494.1 3889 1754 3 ENSG00000279036.1 RP11-81K2.2 chr17 49494223 49497800 - TEC KNOWN OTTHUMG00000177920.1 3578 3578 1 ENSG00000064300.7 NGFR chr17 49495293 49515017 + protein_coding KNOWN OTTHUMG00000161495.1 19725 4150 15 ENSG00000249906.1 RP5-1029K10.2 chr17 49505657 49574064 - antisense NOVEL OTTHUMG00000161498.1 68408 1221 3 ENSG00000277478.1 MIR6165 chr17 49510817 49510900 + miRNA KNOWN NA 84 84 1 ENSG00000250310.1 RP5-1029K10.4 chr17 49544847 49577962 - antisense NOVEL OTTHUMG00000161497.1 33116 577 2 ENSG00000252789.1 AC006487.1 chr17 49561002 49561085 - miRNA NOVEL NA 84 84 1 ENSG00000182575.7 NXPH3 chr17 49575858 49583827 + protein_coding KNOWN OTTHUMG00000161491.2 7970 5648 6 ENSG00000143811.15 PYCR2 chr1 225919877 225924340 - protein_coding KNOWN OTTHUMG00000037506.4 4464 3602 43 ENSG00000121067.16 SPOP chr17 49598884 49678234 - protein_coding KNOWN OTTHUMG00000161496.16 79351 6380 135 ENSG00000121073.12 SLC35B1 chr17 49700943 49709014 - protein_coding KNOWN OTTHUMG00000161638.10 8072 5919 104 ENSG00000250751.1 RP11-613C6.2 chr17 49708334 49720060 + antisense NOVEL OTTHUMG00000161697.1 11727 575 2 ENSG00000121104.6 FAM117A chr17 49710332 49789180 - protein_coding KNOWN OTTHUMG00000161696.2 78849 3836 67 ENSG00000136504.10 KAT7 chr17 49788555 49835030 + protein_coding KNOWN OTTHUMG00000161770.4 46476 11749 141 ENSG00000235183.3 RP11-613C6.4 chr17 49795343 49795669 + processed_pseudogene KNOWN OTTHUMG00000161831.1 327 327 1 ENSG00000262837.1 RP11-304F15.7 chr17 49834239 49836454 + lincRNA NOVEL OTTHUMG00000177975.1 2216 416 2 ENSG00000176358.14 TAC4 chr17 49838309 49848017 - protein_coding KNOWN OTTHUMG00000161830.2 9709 1001 27 ENSG00000204584.1 RP11-304F15.3 chr17 49845910 49848837 + antisense NOVEL OTTHUMG00000161829.1 2928 2100 3 ENSG00000248954.1 RP11-304F15.4 chr17 49887598 49900893 + lincRNA NOVEL OTTHUMG00000161832.1 13296 1816 5 ENSG00000274674.1 MIR6741 chr1 225922080 225922142 - miRNA KNOWN NA 63 63 1 ENSG00000254039.1 RP11-304F15.6 chr17 49914403 49932918 + lincRNA NOVEL OTTHUMG00000163965.1 18516 395 3 ENSG00000249176.1 RP11-304F15.5 chr17 49939122 49939819 + processed_pseudogene KNOWN OTTHUMG00000161828.1 698 698 1 ENSG00000199492.1 RNU6-1313P chr17 49966075 49966176 - snRNA KNOWN NA 102 102 1 ENSG00000108813.10 DLX4 chr17 49968970 49974959 + protein_coding KNOWN OTTHUMG00000161839.6 5990 3644 15 ENSG00000064195.7 DLX3 chr17 49990005 49995224 - protein_coding KNOWN OTTHUMG00000161892.2 5220 2715 5 ENSG00000248172.1 RP11-1094H24.3 chr17 49996889 50016844 + lincRNA NOVEL OTTHUMG00000161893.1 19956 586 2 ENSG00000281242.1 Clostridiales-1 chr17 50023661 50023794 + sRNA NOVEL NA 134 134 1 ENSG00000280736.1 Clostridiales-1 chr17 50024129 50024285 - sRNA NOVEL NA 157 157 1 ENSG00000281631.1 Clostridiales-1 chr17 50024408 50024572 - sRNA NOVEL NA 165 165 1 ENSG00000246640.1 RP11-1094H24.4 chr17 50050349 50055739 - lincRNA NOVEL OTTHUMG00000161891.1 5391 2533 3 ENSG00000248322.1 RP4-559A3.6 chr1 225936411 225937557 - sense_overlapping NOVEL OTTHUMG00000041338.1 1147 342 2 ENSG00000005884.16 ITGA3 chr17 50055968 50090481 + protein_coding KNOWN OTTHUMG00000161890.5 34514 9802 133 ENSG00000276851.1 RP5-875H18.9 chr17 50094065 50094647 + lincRNA NOVEL OTTHUMG00000186661.1 583 583 1 ENSG00000005882.10 PDK2 chr17 50094737 50112152 + protein_coding KNOWN OTTHUMG00000161948.16 17416 5481 96 ENSG00000275025.1 RP5-875H18.10 chr17 50098460 50098899 - antisense NOVEL OTTHUMG00000186662.1 440 440 1 ENSG00000250282.1 RP5-875H18.4 chr17 50100704 50101920 - antisense NOVEL OTTHUMG00000161991.1 1217 430 2 ENSG00000167100.13 SAMD14 chr17 50110040 50129882 - protein_coding KNOWN OTTHUMG00000161992.2 19843 7016 54 ENSG00000108819.10 PPP1R9B chr17 50133735 50150630 - protein_coding KNOWN OTTHUMG00000162008.6 16896 4298 15 ENSG00000236472.1 AC002401.1 chr17 50135586 50146176 + antisense NOVEL OTTHUMG00000132433.1 10591 468 4 ENSG00000253730.1 RP11-893F2.13 chr17 50158333 50161276 - antisense NOVEL OTTHUMG00000163971.1 2944 547 2 ENSG00000261959.1 RP11-893F2.14 chr17 50163523 50165316 - antisense NOVEL OTTHUMG00000177977.1 1794 1794 1 ENSG00000143768.10 LEFTY2 chr1 225936598 225941489 - protein_coding KNOWN OTTHUMG00000037441.1 4892 2392 17 ENSG00000108823.14 SGCA chr17 50164214 50175931 + protein_coding KNOWN OTTHUMG00000162024.3 11718 2452 64 ENSG00000188662.6 HILS1 chr17 50171428 50181178 - unitary_pseudogene KNOWN OTTHUMG00000162025.2 9751 1219 3 ENSG00000108821.12 COL1A1 chr17 50183289 50201632 - protein_coding KNOWN OTTHUMG00000148674.8 18344 9819 99 ENSG00000249406.1 RP11-893F2.5 chr17 50208972 50214459 + lincRNA NOVEL OTTHUMG00000162055.1 5488 839 5 ENSG00000263176.1 RP11-893F2.15 chr17 50212933 50215357 - lincRNA NOVEL OTTHUMG00000177978.1 2425 578 3 ENSG00000251085.1 RP11-893F2.6 chr17 50214694 50215420 + lincRNA NOVEL OTTHUMG00000162061.1 727 455 3 ENSG00000249838.1 SUMO2P7 chr17 50235845 50236129 + processed_pseudogene KNOWN OTTHUMG00000162059.1 285 285 1 ENSG00000167105.6 TMEM92 chr17 50271406 50281485 + protein_coding KNOWN OTTHUMG00000162060.3 10080 3101 15 ENSG00000251179.1 TMEM92-AS1 chr17 50281577 50287855 - antisense NOVEL OTTHUMG00000162058.1 6279 750 4 ENSG00000274668.1 AC015909.1 chr17 50325345 50325442 + miRNA NOVEL NA 98 98 1 ENSG00000213032.3 NDUFA3P3 chr1 225964179 225964428 + processed_pseudogene KNOWN OTTHUMG00000037505.1 250 250 1 ENSG00000015532.8 XYLT2 chr17 50346092 50363138 + protein_coding KNOWN OTTHUMG00000162057.3 17047 5472 39 ENSG00000279792.1 RP11-893F2.18 chr17 50362967 50365232 - TEC KNOWN OTTHUMG00000177981.1 2266 2266 1 ENSG00000108826.14 MRPL27 chr17 50367857 50373214 - protein_coding KNOWN OTTHUMG00000162062.4 5358 3027 25 ENSG00000154920.13 EME1 chr17 50373220 50381483 + protein_coding KNOWN OTTHUMG00000164974.2 8264 3294 58 ENSG00000108829.9 LRRC59 chr17 50375059 50397553 - protein_coding KNOWN OTTHUMG00000162079.4 22495 4570 11 ENSG00000206824.1 Y_RNA chr17 50386145 50386246 - misc_RNA NOVEL NA 102 102 1 ENSG00000253102.1 RP1-117B12.4 chr17 50396438 50397888 + antisense NOVEL OTTHUMG00000162080.3 1451 715 2 ENSG00000167107.11 ACSF2 chr17 50426158 50474845 + protein_coding KNOWN OTTHUMG00000162128.4 48688 5797 153 ENSG00000262759.1 MRPS21P9 chr17 50450179 50450725 - processed_pseudogene KNOWN OTTHUMG00000177425.1 547 257 2 ENSG00000136457.8 CHAD chr17 50464496 50468966 - protein_coding KNOWN OTTHUMG00000162129.3 4471 1802 10 ENSG00000143751.9 SDE2 chr1 225982702 225999331 - protein_coding KNOWN OTTHUMG00000037504.2 16630 3975 7 ENSG00000275897.1 RP11-94C24.13 chr17 50475819 50478391 + lincRNA NOVEL OTTHUMG00000186663.1 2573 2573 1 ENSG00000136444.8 RSAD1 chr17 50478800 50485975 + protein_coding KNOWN OTTHUMG00000162126.4 7176 4198 38 ENSG00000249451.1 RP11-94C24.6 chr17 50503412 50508328 - lincRNA NOVEL OTTHUMG00000162156.1 4917 349 2 ENSG00000136449.12 MYCBPAP chr17 50508384 50531501 + protein_coding KNOWN OTTHUMG00000157184.21 23118 6515 104 ENSG00000049283.16 EPN3 chr17 50532543 50543750 + protein_coding KNOWN OTTHUMG00000162155.3 11208 4642 89 ENSG00000250286.1 RP11-94C24.8 chr17 50537294 50538754 - processed_transcript NOVEL OTTHUMG00000162154.1 1461 886 5 ENSG00000006282.18 SPATA20 chr17 50543058 50555852 + protein_coding KNOWN OTTHUMG00000162162.3 12795 5337 206 ENSG00000250107.1 CACNA1G-AS1 chr17 50556207 50562108 - antisense NOVEL OTTHUMG00000162163.1 5902 1579 6 ENSG00000006283.16 CACNA1G chr17 50561068 50627474 + protein_coding KNOWN OTTHUMG00000162180.6 66407 9709 1139 ENSG00000250976.1 RP11-94C24.11 chr17 50563203 50563783 - antisense NOVEL OTTHUMG00000162216.1 581 156 2 ENSG00000280763.1 AL034395.1 chr1 14607334 14607436 - miRNA NOVEL NA 103 103 1 ENSG00000272562.1 RP11-396C23.4 chr1 226060712 226061876 - antisense NOVEL OTTHUMG00000186458.1 1165 490 2 ENSG00000251239.1 CTB-22K21.2 chr17 50627032 50631940 - antisense NOVEL OTTHUMG00000162217.1 4909 510 2 ENSG00000108846.14 ABCC3 chr17 50634777 50692252 + protein_coding KNOWN OTTHUMG00000162245.4 57476 9614 162 ENSG00000154945.6 ANKRD40 chr17 50693190 50707924 - protein_coding KNOWN OTTHUMG00000162255.3 14735 4849 9 ENSG00000262967.1 RP11-294J22.6 chr17 50693448 50695449 + antisense NOVEL OTTHUMG00000177508.1 2002 670 2 ENSG00000201340.1 Y_RNA chr17 50696644 50696760 + misc_RNA NOVEL NA 117 117 1 ENSG00000108848.14 LUC7L3 chr17 50719544 50756213 + protein_coding KNOWN OTTHUMG00000162257.11 36670 8151 129 ENSG00000278963.1 RP11-294J22.7 chr17 50722074 50724224 + TEC KNOWN OTTHUMG00000177509.1 2151 2151 1 ENSG00000167117.7 LINC00483 chr17 50761029 50767557 - processed_transcript KNOWN OTTHUMG00000132429.6 6529 3663 15 ENSG00000278672.1 MIR8059 chr17 50768650 50768730 + miRNA KNOWN NA 81 81 1 ENSG00000248702.1 RP11-294J22.5 chr17 50797366 50797651 - processed_pseudogene KNOWN OTTHUMG00000162275.1 286 286 1 ENSG00000163041.8 H3F3A chr1 226061851 226072001 + protein_coding KNOWN OTTHUMG00000037507.1 10151 3146 15 ENSG00000173714.7 WFIKKN2 chr17 50834650 50842348 + protein_coding KNOWN OTTHUMG00000162274.1 7699 3971 4 ENSG00000261976.2 RP11-506D12.5 chr17 50840057 50841626 - antisense NOVEL OTTHUMG00000177523.2 1570 457 2 ENSG00000243521.2 RPL5P33 chr17 50847950 50849270 + processed_pseudogene KNOWN OTTHUMG00000157880.2 1321 905 2 ENSG00000141232.4 TOB1 chr17 50862223 50867978 - protein_coding KNOWN OTTHUMG00000162277.1 5756 2521 7 ENSG00000229980.4 TOB1-AS1 chr17 50866679 50909737 + processed_transcript NOVEL OTTHUMG00000132428.6 43059 2149 11 ENSG00000262006.1 RP11-700H6.4 chr17 50909637 50910232 - lincRNA NOVEL OTTHUMG00000177525.1 596 492 2 ENSG00000247011.2 RP11-700H6.1 chr17 50934989 50944713 - lincRNA NOVEL OTTHUMG00000162317.1 9725 2054 2 ENSG00000251665.1 RP11-700H6.2 chr17 50944104 50948750 + lincRNA NOVEL OTTHUMG00000162315.1 4647 1229 4 ENSG00000008294.19 SPAG9 chr17 50962174 51120865 - protein_coding KNOWN OTTHUMG00000162316.5 158692 11963 245 ENSG00000249870.1 RP11-481C4.1 chr17 51042524 51085471 + antisense NOVEL OTTHUMG00000162349.1 42948 332 3 ENSG00000225518.2 RP11-396C23.2 chr1 226083639 226090292 + lincRNA NOVEL OTTHUMG00000041341.2 6654 821 7 ENSG00000239672.6 NME1 chr17 51153536 51162428 + protein_coding KNOWN OTTHUMG00000137474.4 8893 3438 41 ENSG00000011052.20 NME2 chr17 51153590 51171744 + protein_coding KNOWN OTTHUMG00000137475.4 18155 1241 24 ENSG00000243678.10 NME1-NME2 chr17 51165435 51171747 + protein_coding KNOWN OTTHUMG00000154062.3 6313 2632 31 ENSG00000280803.1 NME1-NME2 chr17 51166831 51171507 + protein_coding KNOWN NA 4677 249 3 ENSG00000011258.14 MBTD1 chr17 51177425 51260163 - protein_coding KNOWN OTTHUMG00000150442.3 82739 7201 75 ENSG00000279089.1 RP11-481C4.2 chr17 51183191 51186403 - TEC KNOWN OTTHUMG00000177540.1 3213 3213 1 ENSG00000264895.1 RP11-421E14.2 chr17 51249579 51251748 - sense_intronic NOVEL OTTHUMG00000177541.1 2170 2170 1 ENSG00000011260.12 UTP18 chr17 51260528 51297936 + protein_coding KNOWN OTTHUMG00000162370.4 37409 2721 44 ENSG00000249383.1 RP11-1018N14.1 chr17 51312609 51335165 - lincRNA NOVEL OTTHUMG00000162372.1 22557 1723 6 ENSG00000249982.1 RP11-1018N14.3 chr17 51332679 51334090 + lincRNA NOVEL OTTHUMG00000162373.1 1412 650 2 ENSG00000270598.1 RP11-396C23.3 chr1 226127178 226127346 + processed_pseudogene KNOWN OTTHUMG00000184475.1 169 169 1 ENSG00000249658.1 RP11-1018N14.4 chr17 51335261 51336240 + lincRNA NOVEL OTTHUMG00000162371.1 980 585 2 ENSG00000225860.2 RP11-1018N14.2 chr17 51336715 51342571 + lincRNA NOVEL OTTHUMG00000162374.1 5857 2645 3 ENSG00000267452.1 RP11-1018N14.5 chr17 51435427 51445802 + lincRNA NOVEL OTTHUMG00000162380.3 10376 3115 5 ENSG00000187504.6 RPL7P48 chr17 51502488 51503233 - processed_pseudogene KNOWN OTTHUMG00000157881.1 746 746 1 ENSG00000154975.12 CA10 chr17 51630313 52160017 - protein_coding KNOWN OTTHUMG00000177544.2 529705 4450 68 ENSG00000279743.1 CTB-43I4.1 chr17 51761260 51763397 - TEC KNOWN OTTHUMG00000177545.1 2138 2138 1 ENSG00000280846.1 AC004108.1 chr17 51831646 51831733 + miRNA NOVEL NA 88 88 1 ENSG00000263317.1 RP11-429O1.1 chr17 52390515 52535701 + lincRNA NOVEL OTTHUMG00000177546.1 145187 308 4 ENSG00000226364.1 AC102948.2 chr17 52862121 52899588 + lincRNA NOVEL OTTHUMG00000132354.2 37468 682 3 ENSG00000227011.3 C17orf112 chr17 52985520 52987652 + lincRNA KNOWN OTTHUMG00000132355.1 2133 835 4 ENSG00000182827.8 ACBD3 chr1 226144679 226186730 - protein_coding KNOWN OTTHUMG00000037560.2 42052 3578 10 ENSG00000262902.1 RP11-750B16.1 chr17 53105734 53106358 + processed_pseudogene KNOWN OTTHUMG00000177751.2 625 625 1 ENSG00000276078.1 AC091154.1 chr17 53106069 53106157 - miRNA NOVEL NA 89 89 1 ENSG00000263252.1 RP11-146P2.1 chr17 53353427 53354134 - processed_pseudogene KNOWN OTTHUMG00000177752.1 708 708 1 ENSG00000262271.1 CTD-2535P7.1 chr17 53434131 53435829 + processed_pseudogene KNOWN OTTHUMG00000177753.1 1699 1183 3 ENSG00000262518.1 CTD-2535P7.2 chr17 53438556 53439721 + processed_pseudogene KNOWN OTTHUMG00000177754.1 1166 768 2 ENSG00000221534.2 AC090079.1 chr17 53537514 53537604 + miRNA NOVEL NA 91 91 1 ENSG00000262384.1 RP11-312B18.1 chr17 53681630 53682111 - processed_pseudogene KNOWN OTTHUMG00000177755.1 482 482 1 ENSG00000233380.1 RPS2P48 chr17 53756989 53757870 - processed_pseudogene KNOWN OTTHUMG00000132351.1 882 882 1 ENSG00000141200.7 KIF2B chr17 53822901 53825213 + protein_coding KNOWN OTTHUMG00000177756.1 2313 2313 1 ENSG00000263189.1 RP11-618P13.1 chr17 53952936 53955324 + processed_pseudogene KNOWN OTTHUMG00000177757.1 2389 2389 1 ENSG00000234478.1 RP11-275I14.4 chr1 226148003 226155071 + antisense NOVEL OTTHUMG00000041339.2 7069 535 2 ENSG00000261965.1 ISCA1P3 chr17 54477796 54478168 + processed_pseudogene KNOWN OTTHUMG00000177813.1 373 373 1 ENSG00000263199.1 RP11-372K20.1 chr17 54702936 54703430 + processed_pseudogene KNOWN OTTHUMG00000177814.1 495 495 1 ENSG00000263125.1 ARL2BPP8 chr17 54754165 54754649 - processed_pseudogene KNOWN OTTHUMG00000177815.2 485 485 1 ENSG00000251809.1 RN7SKP14 chr17 54770949 54771277 + misc_RNA KNOWN NA 329 329 1 ENSG00000141198.12 TOM1L1 chr17 54899387 54961956 + protein_coding KNOWN OTTHUMG00000177816.5 62570 7275 199 ENSG00000166260.9 COX11 chr17 54951902 54968785 - protein_coding KNOWN OTTHUMG00000177838.1 16884 6488 28 ENSG00000279059.1 RP11-257O5.2 chr17 54956760 54958426 - TEC KNOWN OTTHUMG00000177839.1 1667 1667 1 ENSG00000275710.1 RP11-257O5.4 chr17 54964474 54964679 + antisense NOVEL OTTHUMG00000186664.1 206 206 1 ENSG00000166263.12 STXBP4 chr17 54968727 55173632 + protein_coding KNOWN OTTHUMG00000074043.5 204906 18055 74 ENSG00000108924.12 HLF chr17 55265012 55325065 + protein_coding KNOWN OTTHUMG00000177840.2 60054 6602 34 ENSG00000223570.2 RP11-275I14.2 chr1 226188870 226189221 - processed_pseudogene KNOWN OTTHUMG00000037561.2 352 352 1 ENSG00000263096.1 RP11-515O17.2 chr17 55271504 55273653 - antisense NOVEL OTTHUMG00000177841.1 2150 1740 2 ENSG00000262079.1 RP11-515O17.3 chr17 55325757 55327791 - lincRNA NOVEL OTTHUMG00000177842.1 2035 1763 2 ENSG00000108960.6 MMD chr17 55392613 55421992 - protein_coding KNOWN OTTHUMG00000177845.1 29380 3177 14 ENSG00000262395.1 RP11-515E23.2 chr17 55454046 55458450 - lincRNA NOVEL OTTHUMG00000177854.1 4405 263 2 ENSG00000261873.1 RP11-515E23.1 chr17 55468066 55510938 - lincRNA NOVEL OTTHUMG00000177855.1 42873 566 4 ENSG00000236319.2 CTD-2033D24.2 chr17 55526964 55561577 - transcribed_processed_pseudogene KNOWN OTTHUMG00000177856.1 34614 1124 5 ENSG00000262135.1 GARSP1 chr17 55550931 55551649 - processed_pseudogene KNOWN OTTHUMG00000177857.1 719 719 1 ENSG00000200107.1 RNU6-1249P chr17 55551810 55551920 + snRNA KNOWN NA 111 111 1 ENSG00000166292.10 TMEM100 chr17 55719627 55732121 - protein_coding KNOWN OTTHUMG00000177858.2 12495 2906 16 ENSG00000141179.12 PCTP chr17 55750979 55842830 + protein_coding KNOWN OTTHUMG00000177859.2 91852 5880 44 ENSG00000185155.10 MIXL1 chr1 226223618 226227054 + protein_coding KNOWN OTTHUMG00000037558.3 3437 2029 6 ENSG00000262052.1 RP11-763E3.1 chr17 55842677 55872939 - lincRNA NOVEL OTTHUMG00000177894.1 30263 585 3 ENSG00000264277.1 AC011073.1 chr17 56054787 56054886 + miRNA NOVEL NA 100 100 1 ENSG00000153930.9 ANKFN1 chr17 56110958 56511659 + protein_coding KNOWN OTTHUMG00000155010.3 400702 6923 66 ENSG00000274924.1 AC006925.1 chr17 56236720 56236810 + miRNA NOVEL NA 91 91 1 ENSG00000261882.1 RP11-502F1.2 chr17 56368063 56368215 + processed_pseudogene KNOWN OTTHUMG00000178119.1 153 153 1 ENSG00000279606.1 RP11-502F1.1 chr17 56471142 56473647 + TEC KNOWN OTTHUMG00000178120.1 2506 2506 1 ENSG00000243058.1 RPL39P33 chr17 56573040 56573195 + processed_pseudogene KNOWN OTTHUMG00000157882.1 156 156 1 ENSG00000183691.4 NOG chr17 56593699 56595590 + protein_coding KNOWN OTTHUMG00000151770.1 1892 1892 1 ENSG00000214226.7 C17orf67 chr17 56791913 56838773 - protein_coding KNOWN OTTHUMG00000132083.2 46861 2410 13 ENSG00000153933.8 DGKE chr17 56834099 56869567 + protein_coding KNOWN OTTHUMG00000178121.2 35469 10933 34 ENSG00000183814.14 LIN9 chr1 226231149 226309869 - protein_coding KNOWN OTTHUMG00000037557.3 78721 4442 62 ENSG00000212469.1 RNU6-1158P chr17 56871170 56871276 + snRNA KNOWN NA 107 107 1 ENSG00000262408.1 RP11-670E13.3 chr17 56884639 56884819 - processed_pseudogene KNOWN OTTHUMG00000178123.1 181 181 1 ENSG00000121060.13 TRIM25 chr17 56887909 56914038 - protein_coding KNOWN OTTHUMG00000178124.1 26130 6666 47 ENSG00000262112.1 RP11-670E13.5 chr17 56888880 56891841 + antisense NOVEL OTTHUMG00000178125.1 2962 538 2 ENSG00000265238.1 MIR3614 chr17 56891270 56891355 - miRNA KNOWN NA 86 86 1 ENSG00000274213.1 RP11-670E13.6 chr17 56914186 56914533 + lincRNA NOVEL OTTHUMG00000186667.1 348 348 1 ENSG00000121058.4 COIL chr17 56938187 56961054 - protein_coding KNOWN OTTHUMG00000178126.1 22868 3030 10 ENSG00000262298.1 RP5-1107A17.3 chr17 56939932 56941275 + antisense NOVEL OTTHUMG00000178127.1 1344 549 2 ENSG00000262623.1 RP5-1107A17.2 chr17 56951664 56952404 + processed_pseudogene KNOWN OTTHUMG00000178128.1 741 410 2 ENSG00000121064.11 SCPEP1 chr17 56978105 57006768 + protein_coding KNOWN OTTHUMG00000178129.1 28664 3853 111 ENSG00000236994.1 YBX1P9 chr1 226318015 226318693 - processed_pseudogene KNOWN OTTHUMG00000037559.1 679 679 1 ENSG00000263120.1 RP5-1107A17.4 chr17 56982749 56985104 + sense_intronic NOVEL OTTHUMG00000178130.1 2356 2356 1 ENSG00000261192.1 RNF126P1 chr17 57045478 57046797 + transcribed_processed_pseudogene KNOWN OTTHUMG00000176069.2 1320 1320 2 ENSG00000263004.1 RP11-166P13.3 chr17 57078298 57085024 - lincRNA NOVEL OTTHUMG00000178131.1 6727 855 5 ENSG00000121057.11 AKAP1 chr17 57085092 57121349 + protein_coding KNOWN OTTHUMG00000140369.3 36258 5399 120 ENSG00000263089.1 RP11-166P13.4 chr17 57092145 57096425 - antisense NOVEL OTTHUMG00000178132.1 4281 4281 1 ENSG00000153944.9 MSI2 chr17 57255851 57684685 + protein_coding KNOWN OTTHUMG00000178398.2 428835 21479 114 ENSG00000279555.1 RP11-426D19.1 chr17 57277920 57280017 + TEC KNOWN OTTHUMG00000178399.1 2098 2098 1 ENSG00000279281.1 RP11-226M10.3 chr17 57448218 57450291 + TEC KNOWN OTTHUMG00000178400.1 2074 2074 1 ENSG00000278285.1 AC015883.1 chr17 57488508 57488598 - miRNA NOVEL NA 91 91 1 ENSG00000266100.1 RP11-118E18.2 chr17 57522248 57523597 - antisense NOVEL OTTHUMG00000178403.1 1350 563 3 ENSG00000235829.1 TBCAP2 chr1 14692129 14692613 - processed_pseudogene KNOWN OTTHUMG00000037853.1 485 326 2 ENSG00000275406.1 RP11-125A15.3 chr1 226331999 226333655 - unprocessed_pseudogene KNOWN OTTHUMG00000187548.1 1657 540 3 ENSG00000280028.1 RP11-118E18.1 chr17 57531769 57532355 + TEC KNOWN OTTHUMG00000178404.1 587 587 1 ENSG00000263499.1 RP11-118E18.4 chr17 57600856 57608412 - antisense NOVEL OTTHUMG00000178406.1 7557 1412 3 ENSG00000242889.3 RN7SL449P chr17 57618108 57618393 + misc_RNA KNOWN NA 286 286 1 ENSG00000238447.1 RNU7-134P chr17 57685529 57685592 - snRNA KNOWN NA 64 64 1 ENSG00000166329.2 CCDC182 chr17 57744481 57745312 - protein_coding KNOWN OTTHUMG00000132063.1 832 832 1 ENSG00000265542.4 RP11-60A24.3 chr17 57771946 57834749 - lincRNA NOVEL OTTHUMG00000178773.1 62804 612 5 ENSG00000222976.1 RN7SKP94 chr17 57789449 57789732 + misc_RNA KNOWN NA 284 284 1 ENSG00000181610.11 MRPS23 chr17 57834781 57850056 - protein_coding KNOWN OTTHUMG00000178774.2 15276 6379 15 ENSG00000180891.11 CUEDC1 chr17 57861243 57955323 - protein_coding KNOWN OTTHUMG00000178775.2 94081 5577 78 ENSG00000264914.1 RP11-343K8.3 chr17 57912333 57922581 + antisense NOVEL OTTHUMG00000178776.2 10249 459 4 ENSG00000143799.11 PARP1 chr1 226360691 226408079 - protein_coding KNOWN OTTHUMG00000037556.3 47389 7169 57 ENSG00000278642.1 RP11-159D12.11 chr17 57955965 57956143 + lincRNA NOVEL OTTHUMG00000186673.1 179 179 1 ENSG00000136451.7 VEZF1 chr17 57971547 57988259 - protein_coding KNOWN OTTHUMG00000178777.3 16713 4913 20 ENSG00000280233.1 RP11-159D12.3 chr17 57988180 57988760 + TEC KNOWN OTTHUMG00000178778.1 581 581 1 ENSG00000266086.1 RP11-159D12.5 chr17 57989038 58005253 - protein_coding PUTATIVE OTTHUMG00000178779.1 16216 711 3 ENSG00000264112.1 RP11-159D12.2 chr17 57989039 57994850 - lincRNA NOVEL OTTHUMG00000178780.1 5812 5812 5 ENSG00000136450.11 SRSF1 chr17 58003360 58007346 - protein_coding KNOWN OTTHUMG00000178781.2 3987 3340 32 ENSG00000279069.1 RP11-159D12.6 chr17 58006674 58008187 + TEC KNOWN OTTHUMG00000178782.1 1514 1514 1 ENSG00000266290.1 RP11-159D12.10 chr17 58076891 58083204 - lincRNA NOVEL OTTHUMG00000179240.1 6314 6113 3 ENSG00000264364.2 DYNLL2 chr17 58083415 58095536 + protein_coding KNOWN OTTHUMG00000178783.2 12122 6805 3 ENSG00000279207.1 RP11-159D12.8 chr17 58095672 58101479 + TEC KNOWN OTTHUMG00000178784.2 5808 5808 1 ENSG00000270287.1 RP11-118H4.3 chr1 226411615 226412135 - processed_pseudogene KNOWN OTTHUMG00000184477.1 521 521 1 ENSG00000141194.5 OR4D1 chr17 58155133 58156156 + protein_coding KNOWN OTTHUMG00000178799.1 1024 1024 1 ENSG00000229590.3 MSX2P1 chr17 58157028 58157800 + processed_pseudogene KNOWN OTTHUMG00000178800.1 773 773 1 ENSG00000255713.1 OR4D2 chr17 58169656 58170579 + protein_coding KNOWN OTTHUMG00000178801.1 924 924 1 ENSG00000121053.5 EPX chr17 58192737 58205174 + protein_coding KNOWN OTTHUMG00000178802.1 12438 2708 13 ENSG00000278627.1 RP11-506H21.5 chr17 58202352 58203003 - antisense NOVEL OTTHUMG00000186674.1 652 652 1 ENSG00000011143.15 MKS1 chr17 58205437 58219605 - protein_coding KNOWN OTTHUMG00000133714.6 14169 4078 123 ENSG00000167419.9 LPO chr17 58218548 58268518 + protein_coding KNOWN OTTHUMG00000178921.2 49971 6433 90 ENSG00000005381.7 MPO chr17 58269856 58280935 - protein_coding KNOWN OTTHUMG00000178922.1 11080 3526 22 ENSG00000005379.14 BZRAP1 chr17 58301228 58328760 - protein_coding KNOWN OTTHUMG00000178923.2 27533 11354 107 ENSG00000265148.4 BZRAP1-AS1 chr17 58325450 58415766 + antisense NOVEL OTTHUMG00000178924.1 90317 3601 41 ENSG00000229965.1 RP11-118H4.1 chr1 226438564 226439344 + processed_pseudogene KNOWN OTTHUMG00000037584.1 781 781 1 ENSG00000265206.3 RP5-1171I10.5 chr17 58330884 58332508 - antisense NOVEL OTTHUMG00000178925.1 1625 1625 1 ENSG00000273667.1 AC004687.1 chr17 58331215 58331325 - miRNA NOVEL NA 111 111 1 ENSG00000264399.1 MIR4736 chr17 58335976 58336022 - miRNA KNOWN NA 47 47 1 ENSG00000213246.5 SUPT4H1 chr17 58345175 58353093 - protein_coding KNOWN OTTHUMG00000178926.3 7919 2079 31 ENSG00000108375.11 RNF43 chr17 58352500 58417595 - protein_coding KNOWN OTTHUMG00000179077.1 65096 7505 58 ENSG00000176160.8 HSF5 chr17 58420167 58488384 - protein_coding KNOWN OTTHUMG00000179078.2 68218 4094 13 ENSG00000266051.1 AC023992.1 chr17 58456124 58456214 - miRNA NOVEL NA 91 91 1 ENSG00000266648.1 SETP3 chr17 58476138 58476950 - processed_pseudogene KNOWN OTTHUMG00000179241.1 813 813 1 ENSG00000108389.8 MTMR4 chr17 58489529 58517905 - protein_coding KNOWN OTTHUMG00000179079.3 28377 7475 73 ENSG00000264672.4 SEPT4-AS1 chr17 58519837 58556977 + antisense NOVEL OTTHUMG00000179242.1 37141 1575 11 ENSG00000223282.1 RN7SKP165 chr1 226445937 226446292 + misc_RNA KNOWN NA 356 356 1 ENSG00000108387.13 SEPT4 chr17 58520250 58540818 - protein_coding KNOWN OTTHUMG00000179243.2 20569 8012 209 ENSG00000181013.3 C17orf47 chr17 58541587 58544368 - protein_coding KNOWN OTTHUMG00000179244.1 2782 2123 2 ENSG00000121101.14 TEX14 chr17 58556678 58692055 - protein_coding KNOWN OTTHUMG00000179245.2 135378 5325 140 ENSG00000212195.2 U3 chr17 58631641 58631836 - snoRNA NOVEL NA 196 196 1 ENSG00000266826.1 CTD-2200P10.1 chr17 58660580 58661599 - processed_pseudogene KNOWN OTTHUMG00000179246.1 1020 1020 1 ENSG00000199426.1 RNU1-108P chr17 58666537 58666697 - snRNA KNOWN NA 161 161 1 ENSG00000266561.2 CTD-2200P10.3 chr17 58675286 58675462 + processed_pseudogene KNOWN OTTHUMG00000184896.1 177 177 1 ENSG00000206917.1 RNU1-52P chr17 58677574 58677737 - snRNA KNOWN NA 164 164 1 ENSG00000200997.1 RNU1-85P chr17 58679527 58679690 - snRNA KNOWN NA 164 164 1 ENSG00000108384.13 RAD51C chr17 58692573 58735611 + protein_coding KNOWN OTTHUMG00000141292.6 43039 6068 95 ENSG00000177770.11 CDKN2AIPNLP1 chr1 226493188 226493489 - processed_pseudogene KNOWN OTTHUMG00000037585.2 302 302 1 ENSG00000274198.1 RP11-579A4.1 chr17 58747055 58747340 + lincRNA NOVEL OTTHUMG00000186675.1 286 286 1 ENSG00000175175.5 PPM1E chr17 58755869 58985176 + protein_coding KNOWN OTTHUMG00000179248.2 229308 6542 7 ENSG00000276601.1 Metazoa_SRP chr17 58785323 58785608 - misc_RNA NOVEL NA 286 286 1 ENSG00000251865.1 RNU6-518P chr17 58835899 58835994 + snRNA KNOWN NA 96 96 1 ENSG00000241462.1 RP11-579O24.1 chr17 58897776 58899692 + processed_pseudogene KNOWN OTTHUMG00000157889.1 1917 383 2 ENSG00000275680.1 Metazoa_SRP chr17 58951185 58951513 + misc_RNA NOVEL NA 329 329 1 ENSG00000263938.1 RP11-579O24.3 chr17 58965952 58966727 + sense_intronic NOVEL OTTHUMG00000179249.1 776 776 1 ENSG00000108395.12 TRIM37 chr17 58982638 59106921 - protein_coding KNOWN OTTHUMG00000179360.1 124284 5482 144 ENSG00000216168.1 AC100832.1 chr17 58988868 58988954 - miRNA NOVEL NA 87 87 1 ENSG00000263558.2 RN7SL716P chr17 59059226 59059493 + misc_RNA KNOWN NA 268 268 1 ENSG00000203685.8 C1orf95 chr1 226548800 226609214 + protein_coding KNOWN OTTHUMG00000037583.1 60415 7791 10 ENSG00000224738.1 AC099850.1 chr17 59106598 59118267 + antisense NOVEL OTTHUMG00000132079.1 11670 1338 2 ENSG00000182628.11 SKA2 chr17 59109951 59155269 - protein_coding KNOWN OTTHUMG00000179361.1 45319 3148 33 ENSG00000252212.1 RNU2-58P chr17 59129276 59129458 - snRNA KNOWN NA 183 183 1 ENSG00000211514.1 MIR454 chr17 59137758 59137872 - miRNA KNOWN NA 115 115 1 ENSG00000207996.1 MIR301A chr17 59151136 59151221 - miRNA KNOWN NA 86 86 1 ENSG00000068489.11 PRR11 chr17 59155499 59204705 + protein_coding KNOWN OTTHUMG00000179362.1 49207 4080 63 ENSG00000266537.1 CTD-2510F5.2 chr17 59174983 59181787 - unprocessed_pseudogene KNOWN OTTHUMG00000179363.1 6805 798 5 ENSG00000265303.1 CTD-2510F5.6 chr17 59197566 59215226 + protein_coding PUTATIVE OTTHUMG00000179375.1 17661 557 3 ENSG00000265415.1 CTD-2510F5.4 chr17 59202677 59203829 - antisense NOVEL OTTHUMG00000179364.1 1153 321 2 ENSG00000167447.11 SMG8 chr17 59209400 59215247 + protein_coding KNOWN OTTHUMG00000179365.2 5848 3752 20 ENSG00000143772.8 ITPKB chr1 226631690 226739323 - protein_coding KNOWN OTTHUMG00000037582.1 107634 7036 18 ENSG00000153982.9 GDPD1 chr17 59220467 59275967 + protein_coding KNOWN OTTHUMG00000179376.1 55501 2970 56 ENSG00000207235.1 Y_RNA chr17 59260748 59260846 + misc_RNA NOVEL NA 99 99 1 ENSG00000271063.1 SNRPGP17 chr17 59281130 59281343 + processed_pseudogene KNOWN OTTHUMG00000184894.1 214 214 1 ENSG00000175155.7 YPEL2 chr17 59331689 59401729 + protein_coding KNOWN OTTHUMG00000179378.1 70041 8667 18 ENSG00000278863.1 RP11-567L7.3 chr17 59362665 59363278 + TEC KNOWN OTTHUMG00000179379.1 614 614 1 ENSG00000263857.1 MIR4729 chr17 59366083 59366154 + miRNA KNOWN NA 72 72 1 ENSG00000266002.1 RP11-567L7.5 chr17 59400488 59403303 - antisense NOVEL OTTHUMG00000179381.1 2816 215 2 ENSG00000265313.4 LINC01476 chr17 59430869 59526946 - lincRNA NOVEL OTTHUMG00000179382.1 96078 726 6 ENSG00000200889.1 RNU4-13P chr17 59537359 59537499 - snRNA KNOWN NA 141 141 1 ENSG00000108406.8 DHX40 chr17 59565525 59608345 + protein_coding KNOWN OTTHUMG00000179401.2 42821 5939 71 ENSG00000228382.1 ITPKB-IT1 chr1 226656640 226675067 - sense_intronic NOVEL OTTHUMG00000037587.1 18428 870 4 ENSG00000273702.1 RP11-758H9.2 chr17 59618553 59619714 - lincRNA NOVEL OTTHUMG00000186677.1 1162 1162 1 ENSG00000141367.10 CLTC chr17 59619689 59696956 + protein_coding KNOWN OTTHUMG00000134279.3 77268 11836 147 ENSG00000141378.14 PTRH2 chr17 59674636 59707626 - protein_coding KNOWN OTTHUMG00000154532.3 32991 4740 11 ENSG00000062716.9 VMP1 chr17 59707192 59842255 + protein_coding KNOWN OTTHUMG00000179882.2 135064 6916 78 ENSG00000267637.1 RP11-619I22.1 chr17 59784813 59785035 + sense_intronic NOVEL OTTHUMG00000179883.1 223 223 1 ENSG00000199004.1 MIR21 chr17 59841266 59841337 + miRNA KNOWN NA 72 72 1 ENSG00000201524.1 RNU6-450P chr17 59847438 59847544 - snRNA KNOWN NA 107 107 1 ENSG00000108423.13 TUBD1 chr17 59859482 59892945 - protein_coding KNOWN OTTHUMG00000179885.1 33464 3330 89 ENSG00000270264.1 NDUFB8P2 chr17 59885015 59885552 + processed_pseudogene KNOWN OTTHUMG00000184889.1 538 538 1 ENSG00000108443.12 RPS6KB1 chr17 59893046 59950564 + protein_coding KNOWN OTTHUMG00000150642.3 57519 7687 101 ENSG00000228548.1 ITPKB-AS1 chr1 226668897 226676345 + antisense NOVEL OTTHUMG00000041340.1 7449 538 2 ENSG00000241913.1 RP5-1073F15.1 chr17 59912197 59912366 + processed_pseudogene KNOWN OTTHUMG00000157891.1 170 170 1 ENSG00000267318.1 RP11-178C3.1 chr17 59940908 59973101 + protein_coding PUTATIVE OTTHUMG00000179976.1 32194 481 4 ENSG00000189050.13 RNFT1 chr17 59952240 59964761 - protein_coding KNOWN OTTHUMG00000148658.3 12522 3399 56 ENSG00000267104.2 TBC1D3P1-DHX40P1 chr17 59962363 60018975 - lincRNA KNOWN OTTHUMG00000179977.1 56613 1841 14 ENSG00000267302.4 RP11-178C3.2 chr17 59964832 59996972 + lincRNA NOVEL OTTHUMG00000179978.1 32141 2137 7 ENSG00000266992.1 DHX40P1 chr17 59976009 60002384 - unprocessed_pseudogene KNOWN OTTHUMG00000179979.1 26376 1412 11 ENSG00000238283.3 TBC1D3P1 chr17 60008437 60017498 - unprocessed_pseudogene KNOWN OTTHUMG00000179980.1 9062 1693 13 ENSG00000275860.1 RP11-178C3.7 chr17 60021072 60022436 + unprocessed_pseudogene KNOWN OTTHUMG00000187935.1 1365 421 2 ENSG00000274378.1 RP11-178C3.8 chr17 60025859 60030746 + unprocessed_pseudogene KNOWN OTTHUMG00000187936.1 4888 416 2 ENSG00000263422.1 AC005702.1 chr17 60042361 60042442 - miRNA NOVEL NA 82 82 1 ENSG00000175147.10 TMEM51-AS1 chr1 15111815 15152464 - antisense KNOWN OTTHUMG00000002043.5 40650 7100 11 ENSG00000238183.2 RPS27P5 chr1 226781501 226781744 + processed_pseudogene KNOWN OTTHUMG00000037586.2 244 244 1 ENSG00000266701.1 AC005702.4 chr17 60042546 60042627 - miRNA NOVEL NA 82 82 1 ENSG00000265638.1 AC005702.3 chr17 60042694 60042772 - miRNA NOVEL NA 79 79 1 ENSG00000263820.1 AC005702.2 chr17 60042805 60042882 - miRNA NOVEL NA 78 78 1 ENSG00000264049.1 MIR4737 chr17 60043025 60043105 - miRNA KNOWN NA 81 81 1 ENSG00000068097.13 HEATR6 chr17 60043194 60078931 - protein_coding KNOWN OTTHUMG00000179981.1 35738 4868 109 ENSG00000267526.1 RP11-178C3.6 chr17 60063004 60064782 - processed_pseudogene KNOWN OTTHUMG00000179982.1 1779 1447 2 ENSG00000267416.1 CTD-2319I12.2 chr17 60079309 60088695 + lincRNA NOVEL OTTHUMG00000179983.2 9387 699 2 ENSG00000261040.5 WFDC21P chr17 60083566 60091885 - processed_transcript NOVEL OTTHUMG00000176074.2 8320 1099 29 ENSG00000280852.1 AC025048.1 chr17 60102183 60102662 - protein_coding NOVEL NA 480 480 1 ENSG00000267295.1 CTD-2319I12.3 chr17 60113793 60120687 - unprocessed_pseudogene KNOWN OTTHUMG00000179984.1 6895 569 3 ENSG00000143801.15 PSEN2 chr1 226870184 226896105 + protein_coding KNOWN OTTHUMG00000037563.4 25922 3752 84 ENSG00000277532.1 CTD-2319I12.9 chr17 60124110 60125474 - unprocessed_pseudogene KNOWN OTTHUMG00000187937.1 1365 421 2 ENSG00000267248.1 CTD-2319I12.4 chr17 60126535 60135644 - processed_transcript NOVEL OTTHUMG00000179985.1 9110 1566 5 ENSG00000267095.1 CTD-2319I12.5 chr17 60135762 60140081 - lincRNA NOVEL OTTHUMG00000179986.1 4320 542 2 ENSG00000167434.8 CA4 chr17 60149936 60170899 + protein_coding KNOWN OTTHUMG00000179987.1 20964 2424 28 ENSG00000266960.1 FAM106DP chr17 60173322 60173822 + unprocessed_pseudogene KNOWN OTTHUMG00000179988.1 501 501 1 ENSG00000281662.1 Metazoa_SRP chr17 60175423 60175669 + misc_RNA NOVEL NA 247 247 1 ENSG00000170832.11 USP32 chr17 60179094 60422470 - protein_coding KNOWN OTTHUMG00000180001.2 243377 7755 130 ENSG00000252577.1 SCARNA20 chr17 60231516 60231646 - scaRNA KNOWN NA 131 131 1 ENSG00000241157.1 RP11-3K24.1 chr17 60245288 60245647 - processed_pseudogene KNOWN OTTHUMG00000157893.1 360 360 1 ENSG00000275562.1 RP11-3K24.3 chr17 60256720 60258411 + unprocessed_pseudogene KNOWN OTTHUMG00000187938.1 1692 618 4 ENSG00000163050.15 ADCK3 chr1 226897536 226987545 + protein_coding KNOWN OTTHUMG00000037621.5 90010 7797 85 ENSG00000280588.1 AC104763.1 chr17 60296500 60296638 + miRNA NOVEL NA 139 139 1 ENSG00000271626.1 RP11-3K24.2 chr17 60315834 60316215 + processed_pseudogene KNOWN OTTHUMG00000184886.1 382 382 1 ENSG00000141371.11 C17orf64 chr17 60392429 60431421 + protein_coding KNOWN OTTHUMG00000157171.4 38993 1184 15 ENSG00000213228.5 RPL12P38 chr17 60433678 60435996 - transcribed_processed_pseudogene KNOWN OTTHUMG00000157897.2 2319 2319 2 ENSG00000062725.8 APPBP2 chr17 60443149 60526219 - protein_coding KNOWN OTTHUMG00000180048.2 83071 9876 43 ENSG00000270553.1 RP11-15E18.5 chr17 60513190 60513550 + processed_pseudogene KNOWN OTTHUMG00000184960.1 361 361 1 ENSG00000259349.1 RP11-15E18.1 chr17 60526293 60550798 + antisense NOVEL OTTHUMG00000172047.1 24506 718 8 ENSG00000267678.1 RP11-15E18.3 chr17 60562010 60562161 - processed_pseudogene KNOWN OTTHUMG00000180049.1 152 152 1 ENSG00000267772.1 RP11-15E18.4 chr17 60564547 60586623 + lincRNA NOVEL OTTHUMG00000180050.1 22077 646 4 ENSG00000266943.1 RP11-15E18.2 chr17 60564740 60565671 - processed_pseudogene KNOWN OTTHUMG00000180051.1 932 606 2 ENSG00000228525.1 RP5-1087E8.2 chr1 226958069 226958267 - processed_pseudogene KNOWN OTTHUMG00000037617.1 199 199 1 ENSG00000170836.10 PPM1D chr17 60600183 60666280 + protein_coding KNOWN OTTHUMG00000180052.2 66098 5044 22 ENSG00000281267.1 AC110602.1 chr17 60659523 60660839 - protein_coding NOVEL NA 1317 108 5 ENSG00000200013.1 RNU6-623P chr17 60662333 60662437 - snRNA KNOWN NA 105 105 1 ENSG00000141376.19 BCAS3 chr17 60677453 61392838 + protein_coding KNOWN OTTHUMG00000180064.1 715386 14103 334 ENSG00000239932.3 RN7SL606P chr17 60696313 60696605 + misc_RNA KNOWN NA 293 293 1 ENSG00000224011.1 AC111155.1 chr17 60727165 60727482 - processed_pseudogene KNOWN OTTHUMG00000132341.1 318 318 1 ENSG00000252534.1 Y_RNA chr17 60748940 60749046 - misc_RNA NOVEL NA 107 107 1 ENSG00000267083.1 KRT18P61 chr17 60810165 60811462 + processed_pseudogene KNOWN OTTHUMG00000180065.1 1298 1298 1 ENSG00000211515.1 AC079005.1 chr17 60810957 60811052 + miRNA NOVEL NA 96 96 1 ENSG00000254114.1 HMGN1P28 chr17 60851382 60851745 + processed_pseudogene KNOWN OTTHUMG00000163587.1 364 364 1 ENSG00000143776.17 CDC42BPA chr1 226989865 227318474 - protein_coding KNOWN OTTHUMG00000037618.3 328610 14055 267 ENSG00000264322.2 RN7SL448P chr17 60899891 60900185 + misc_RNA KNOWN NA 295 295 1 ENSG00000267207.1 RP11-264B14.1 chr17 61034636 61070122 - antisense NOVEL OTTHUMG00000180067.1 35487 429 3 ENSG00000267449.1 RP11-264B14.2 chr17 61069856 61070356 - antisense NOVEL OTTHUMG00000180068.1 501 247 2 ENSG00000227694.1 AC005884.1 chr17 61069871 61070341 + processed_pseudogene KNOWN OTTHUMG00000132323.1 471 471 1 ENSG00000267667.1 RP11-136H19.1 chr17 61130704 61135964 - antisense NOVEL OTTHUMG00000180069.1 5261 286 2 ENSG00000273982.1 RP11-332H18.7 chr17 61354763 61355155 - antisense NOVEL OTTHUMG00000186680.1 393 393 1 ENSG00000267131.1 RP11-332H18.5 chr17 61361668 61400243 - antisense NOVEL OTTHUMG00000180075.1 38576 470 4 ENSG00000266934.1 RP11-332H18.3 chr17 61382785 61384680 + sense_intronic NOVEL OTTHUMG00000180066.1 1896 1329 5 ENSG00000267280.4 TBX2-AS1 chr17 61393456 61411555 - antisense NOVEL OTTHUMG00000180076.1 18100 1206 14 ENSG00000121068.12 TBX2 chr17 61399896 61409466 + protein_coding KNOWN OTTHUMG00000156986.3 9571 6029 21 ENSG00000233706.1 RP5-1087E8.3 chr1 226992140 226993206 + antisense NOVEL OTTHUMG00000037620.1 1067 440 3 ENSG00000187013.4 C17orf82 chr17 61411751 61413280 + lincRNA KNOWN OTTHUMG00000180077.1 1530 1530 1 ENSG00000121075.8 TBX4 chr17 61452404 61485110 + protein_coding KNOWN OTTHUMG00000180078.2 32707 3996 45 ENSG00000267137.1 RP11-15K2.2 chr17 61460224 61463384 - antisense NOVEL OTTHUMG00000180079.1 3161 552 2 ENSG00000278751.1 AC005901.1 chr17 61485684 61485801 - miRNA NOVEL NA 118 118 1 ENSG00000253506.2 NACA2 chr17 61590426 61591202 - protein_coding KNOWN OTTHUMG00000132321.3 777 777 1 ENSG00000136492.7 BRIP1 chr17 61681266 61863521 - protein_coding KNOWN OTTHUMG00000179233.1 182256 7991 56 ENSG00000108506.10 INTS2 chr17 61865367 61928016 - protein_coding KNOWN OTTHUMG00000179234.1 62650 7138 87 ENSG00000202361.1 Y_RNA chr17 61874084 61874182 - misc_RNA NOVEL NA 99 99 1 ENSG00000108510.8 MED13 chr17 61942605 62065282 - protein_coding KNOWN OTTHUMG00000179251.1 122678 12677 42 ENSG00000279133.1 RP11-342K2.1 chr17 62003700 62007518 - TEC KNOWN OTTHUMG00000179252.1 3819 3819 1 ENSG00000228625.1 RP11-1B20.1 chr1 227178333 227183444 + antisense NOVEL OTTHUMG00000037619.1 5112 814 3 ENSG00000242398.3 RN7SL800P chr17 62005737 62006016 - misc_RNA KNOWN NA 280 280 1 ENSG00000221302.1 AC018628.1 chr17 62015857 62015937 - miRNA NOVEL NA 81 81 1 ENSG00000200842.1 Y_RNA chr17 62036833 62036945 + misc_RNA NOVEL NA 113 113 1 ENSG00000207123.1 Y_RNA chr17 62122320 62122421 + misc_RNA NOVEL NA 102 102 1 ENSG00000266066.1 POLRMTP1 chr17 62136972 62140639 - processed_pseudogene KNOWN OTTHUMG00000179254.1 3668 3668 1 ENSG00000266365.1 RP11-51L5.3 chr17 62231470 62247153 - unprocessed_pseudogene KNOWN OTTHUMG00000179158.1 15684 843 9 ENSG00000266647.1 RP11-51L5.4 chr17 62260634 62261936 + unprocessed_pseudogene KNOWN OTTHUMG00000179159.1 1303 216 2 ENSG00000188755.8 RP11-51L5.6 chr17 62264705 62275655 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000179160.1 10951 2116 42 ENSG00000270033.1 RP11-51L5.7 chr17 62272487 62282915 - protein_coding NOVEL OTTHUMG00000183980.1 10429 397 4 ENSG00000263887.5 RP11-51L5.5 chr17 62282387 62297026 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000179161.2 14640 1815 22 ENSG00000228729.1 RP11-211A18.2 chr1 227234269 227235355 + processed_pseudogene KNOWN OTTHUMG00000037614.1 1087 821 2 ENSG00000242123.1 RP11-51L5.1 chr17 62319884 62320189 + processed_pseudogene KNOWN OTTHUMG00000157901.1 306 306 1 ENSG00000172421.6 EFCAB3 chr17 62370218 62416476 + protein_coding KNOWN OTTHUMG00000179175.1 46259 1930 35 ENSG00000239809.1 RP11-51L5.2 chr17 62381668 62382015 + processed_pseudogene KNOWN OTTHUMG00000157904.1 348 348 1 ENSG00000251981.1 RNU7-52P chr17 62383104 62383166 + snRNA KNOWN NA 63 63 1 ENSG00000239527.1 RPS23P7 chr17 62397397 62398142 + processed_pseudogene KNOWN OTTHUMG00000157912.1 746 444 2 ENSG00000087995.14 METTL2A chr17 62423867 62450822 + protein_coding KNOWN OTTHUMG00000164527.3 26956 3843 27 ENSG00000146872.16 TLK2 chr17 62458658 62615481 + protein_coding KNOWN OTTHUMG00000179176.2 156824 8563 163 ENSG00000239246.3 RP11-464D20.2 chr17 62516321 62516767 - processed_pseudogene KNOWN OTTHUMG00000157915.1 447 447 1 ENSG00000264546.1 RP11-464D20.6 chr17 62549726 62552121 + sense_intronic NOVEL OTTHUMG00000179177.1 2396 1707 2 ENSG00000277463.1 CTD-3035K23.6 chr17 62626031 62626453 + lincRNA NOVEL OTTHUMG00000186686.1 423 423 1 ENSG00000236636.2 RP11-211A18.1 chr1 227264776 227265207 - processed_pseudogene KNOWN OTTHUMG00000037612.2 432 432 1 ENSG00000274565.1 CTD-3035K23.7 chr17 62626437 62627590 - antisense NOVEL OTTHUMG00000186687.1 1154 1154 1 ENSG00000011028.12 MRC2 chr17 62627401 62693597 + protein_coding KNOWN OTTHUMG00000179178.1 66197 6860 76 ENSG00000207382.1 Y_RNA chr17 62661621 62661725 - misc_RNA NOVEL NA 105 105 1 ENSG00000279713.1 CTD-3035K23.3 chr17 62679403 62681354 - TEC KNOWN OTTHUMG00000179179.1 1952 1952 1 ENSG00000199697.1 RNU6-446P chr17 62683905 62684010 + snRNA KNOWN NA 106 106 1 ENSG00000265702.1 RP11-156L14.1 chr17 62699244 62737922 + antisense NOVEL OTTHUMG00000179191.1 38679 3892 10 ENSG00000173838.10 MARCH10 chr17 62701314 62808344 - protein_coding KNOWN OTTHUMG00000179192.2 107031 4920 65 ENSG00000265000.1 RP11-453A12.1 chr17 62808500 62836371 + lincRNA NOVEL OTTHUMG00000179193.1 27872 1811 2 ENSG00000264907.1 SLMO2P3 chr17 62841101 62841645 + processed_pseudogene KNOWN OTTHUMG00000179194.1 545 545 1 ENSG00000263931.1 RP11-180P8.1 chr17 62935402 62966810 - lincRNA NOVEL OTTHUMG00000179100.1 31409 498 3 ENSG00000234277.2 CTD-2090I13.1 chr1 227393591 227431035 + lincRNA NOVEL OTTHUMG00000037611.1 37445 2273 6 ENSG00000207552.1 MIR633 chr17 62944215 62944312 + miRNA KNOWN NA 98 98 1 ENSG00000265262.1 TRMT112P3 chr17 62950831 62951188 - transcribed_processed_pseudogene KNOWN OTTHUMG00000179101.1 358 358 1 ENSG00000266411.1 RP11-180P8.3 chr17 62966817 62968549 - lincRNA NOVEL OTTHUMG00000179102.1 1733 912 2 ENSG00000270324.1 RP11-180P8.4 chr17 62978494 62978841 - processed_pseudogene KNOWN OTTHUMG00000184958.1 348 348 1 ENSG00000272164.1 RP11-180P8.5 chr17 63004672 63005152 - processed_pseudogene KNOWN OTTHUMG00000185382.1 481 481 1 ENSG00000170921.13 TANC2 chr17 63009556 63427699 + protein_coding KNOWN OTTHUMG00000179103.1 418144 22866 105 ENSG00000272383.1 RP11-556O9.4 chr17 63088162 63089197 - processed_pseudogene KNOWN OTTHUMG00000185383.1 1036 1036 1 ENSG00000264513.1 RP11-556O9.2 chr17 63117019 63130947 - antisense NOVEL OTTHUMG00000179111.1 13929 478 4 ENSG00000264529.1 RP11-556O9.3 chr17 63182166 63182817 + transcribed_processed_pseudogene KNOWN OTTHUMG00000179112.1 652 652 1 ENSG00000233635.2 AC037445.1 chr17 63193930 63339053 - antisense NOVEL OTTHUMG00000132317.2 145124 656 6 ENSG00000171729.12 TMEM51 chr1 15152532 15220480 + protein_coding KNOWN OTTHUMG00000002046.3 67949 2240 21 ENSG00000232864.1 CTD-2090I13.2 chr1 227410617 227411319 - processed_pseudogene KNOWN OTTHUMG00000037613.1 703 703 1 ENSG00000281576.1 AC015923.2 chr17 63281928 63282064 + miRNA NOVEL NA 137 137 1 ENSG00000263501.1 RP11-269G24.2 chr17 63305262 63313521 - antisense NOVEL OTTHUMG00000179113.1 8260 562 2 ENSG00000271919.1 RP11-269G24.8 chr17 63331984 63332539 - transcribed_processed_pseudogene KNOWN OTTHUMG00000185384.1 556 556 1 ENSG00000278282.1 AC005828.1 chr17 63362009 63362093 - miRNA NOVEL NA 85 85 1 ENSG00000226797.1 AC015923.1 chr17 63381231 63414312 - antisense NOVEL OTTHUMG00000132315.1 33082 524 3 ENSG00000263644.1 RP11-269G24.3 chr17 63391191 63431089 - antisense NOVEL OTTHUMG00000179114.1 39899 591 2 ENSG00000271749.1 RP11-269G24.7 chr17 63393355 63393586 + unprocessed_pseudogene KNOWN OTTHUMG00000185385.1 232 232 1 ENSG00000265282.1 RP11-269G24.4 chr17 63430468 63432211 - lincRNA NOVEL OTTHUMG00000179115.1 1744 552 2 ENSG00000008283.14 CYB561 chr17 63432304 63446378 - protein_coding KNOWN OTTHUMG00000179116.1 14075 5320 102 ENSG00000265971.1 RP11-269G24.6 chr17 63454993 63455817 + lincRNA NOVEL OTTHUMG00000179117.1 825 355 2 ENSG00000242757.1 CTD-2090I13.3 chr1 227430526 227430976 + processed_pseudogene KNOWN OTTHUMG00000037615.1 451 451 1 ENSG00000228979.4 CTD-2501B8.5 chr17 63471604 63472093 + processed_pseudogene KNOWN OTTHUMG00000185386.1 490 490 1 ENSG00000159640.13 ACE chr17 63477061 63498380 + protein_coding KNOWN OTTHUMG00000154927.2 21320 8365 185 ENSG00000264813.4 CTD-2501B8.1 chr17 63484817 63521848 + protein_coding NOVEL OTTHUMG00000178900.1 37032 4868 47 ENSG00000224353.2 ACE3P chr17 63507056 63519806 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155913.2 12751 1973 13 ENSG00000173826.13 KCNH6 chr17 63523334 63548977 + protein_coding KNOWN OTTHUMG00000178901.1 25644 4211 75 ENSG00000136485.13 DCAF7 chr17 63550461 63594266 + protein_coding KNOWN OTTHUMG00000178902.4 43806 6575 28 ENSG00000200560.1 RNU6-288P chr17 63573242 63573345 - snRNA KNOWN NA 104 104 1 ENSG00000136463.7 TACO1 chr17 63600872 63608365 + protein_coding KNOWN OTTHUMG00000178904.1 7494 2315 9 ENSG00000270587.1 RP11-51F16.9 chr17 63610772 63611184 - processed_pseudogene KNOWN OTTHUMG00000184859.1 413 413 1 ENSG00000198909.6 MAP3K3 chr17 63622415 63696303 + protein_coding KNOWN OTTHUMG00000178905.1 73889 6107 119 ENSG00000224834.1 BTF3P9 chr1 227434064 227434346 + processed_pseudogene KNOWN OTTHUMG00000037616.1 283 283 1 ENSG00000263883.1 EEF1DP7 chr17 63636601 63637113 + transcribed_processed_pseudogene KNOWN OTTHUMG00000178906.1 513 513 1 ENSG00000136490.7 LIMD2 chr17 63695902 63701172 - protein_coding KNOWN OTTHUMG00000178907.1 5271 4745 50 ENSG00000279369.1 RP11-51F16.1 chr17 63700847 63702670 + TEC KNOWN OTTHUMG00000176077.1 1824 1824 1 ENSG00000266173.4 STRADA chr17 63702832 63741970 - protein_coding KNOWN OTTHUMG00000178908.1 39139 6717 157 ENSG00000125695.12 RP11-51F16.8 chr17 63702845 63752097 - protein_coding NOVEL OTTHUMG00000179010.1 49253 2128 12 ENSG00000108588.12 CCDC47 chr17 63745250 63776351 - protein_coding KNOWN OTTHUMG00000178933.3 31102 4537 62 ENSG00000198231.11 DDX42 chr17 63773603 63819317 + protein_coding KNOWN OTTHUMG00000179011.2 45715 8521 151 ENSG00000108592.15 FTSJ3 chr17 63819433 63830012 - protein_coding KNOWN OTTHUMG00000179012.2 10580 5212 86 ENSG00000087191.11 PSMC5 chr17 63827152 63832026 + protein_coding KNOWN OTTHUMG00000179013.2 4875 4490 152 ENSG00000108604.14 SMARCD2 chr17 63832081 63843065 - protein_coding KNOWN OTTHUMG00000179045.1 10985 3734 88 ENSG00000237193.1 RP11-275O4.4 chr1 227482253 227482454 + processed_pseudogene KNOWN OTTHUMG00000057825.1 202 202 1 ENSG00000240280.5 TCAM1P chr17 63849292 63864379 + unitary_pseudogene KNOWN OTTHUMG00000154404.2 15088 3546 31 ENSG00000213218.8 CSH2 chr17 63872012 63881863 - protein_coding KNOWN OTTHUMG00000172283.1 9852 1827 30 ENSG00000136487.16 GH2 chr17 63880215 63881935 - protein_coding KNOWN OTTHUMG00000172284.1 1721 1147 23 ENSG00000259533.1 RP11-630H24.3 chr17 63885851 63886051 + unprocessed_pseudogene KNOWN OTTHUMG00000172285.1 201 201 1 ENSG00000136488.13 CSH1 chr17 63894909 63896661 - protein_coding KNOWN OTTHUMG00000171947.1 1753 1660 20 ENSG00000259333.1 RP11-630H24.4 chr17 63900643 63900879 + unprocessed_pseudogene KNOWN OTTHUMG00000172286.1 237 237 1 ENSG00000204414.10 CSHL1 chr17 63909597 63918838 - protein_coding KNOWN OTTHUMG00000172287.3 9242 1817 40 ENSG00000259384.5 GH1 chr17 63917200 63918838 - protein_coding KNOWN OTTHUMG00000172293.2 1639 1196 22 ENSG00000007312.11 CD79B chr17 63928740 63932354 - protein_coding KNOWN OTTHUMG00000172294.2 3615 2080 24 ENSG00000007314.10 SCN4A chr17 63938554 63972918 - protein_coding KNOWN OTTHUMG00000179046.1 34365 8247 53 ENSG00000278180.1 RP11-275O4.6 chr1 227490691 227492296 + unprocessed_pseudogene KNOWN OTTHUMG00000187549.1 1606 776 5 ENSG00000263489.1 CTC-264K15.6 chr17 63972920 63989422 - lincRNA NOVEL OTTHUMG00000179047.1 16503 502 3 ENSG00000264954.1 RP11-214C8.2 chr17 63996071 63999899 - lincRNA NOVEL OTTHUMG00000178593.1 3829 2926 5 ENSG00000224383.6 PRR29 chr17 63998351 64004304 + protein_coding KNOWN OTTHUMG00000178594.1 5954 4142 45 ENSG00000108622.9 ICAM2 chr17 64002594 64020634 - protein_coding KNOWN OTTHUMG00000178865.2 18041 3243 72 ENSG00000178607.14 ERN1 chr17 64039142 64130819 - protein_coding KNOWN OTTHUMG00000178879.3 91678 10864 43 ENSG00000266402.3 RP11-329L6.2 chr17 64145970 64146476 + lincRNA NOVEL OTTHUMG00000178880.1 507 278 4 ENSG00000199753.1 SNORD104 chr17 64146083 64146152 + snoRNA KNOWN NA 70 70 1 ENSG00000281311.1 SNORA76C chr17 64146337 64146471 + snoRNA NOVEL NA 135 135 1 ENSG00000277887.1 SNORA76C chr17 64146339 64146471 + snoRNA KNOWN NA 133 133 1 ENSG00000136478.6 TEX2 chr17 64147227 64263301 - protein_coding KNOWN OTTHUMG00000178881.1 116075 9094 78 ENSG00000237469.2 TUBB8P10 chr1 227493029 227495142 - unprocessed_pseudogene KNOWN OTTHUMG00000037622.1 2114 1279 4 ENSG00000256358.1 RPL31P57 chr17 64308316 64308690 - processed_pseudogene KNOWN OTTHUMG00000132313.1 375 375 1 ENSG00000261371.4 PECAM1 chr17 64319415 64413776 - protein_coding KNOWN OTTHUMG00000175829.2 94362 7759 43 ENSG00000239823.2 Y_RNA chr17 64390158 64390263 - misc_RNA NOVEL NA 106 106 1 ENSG00000265031.1 MIR1273E chr17 64425069 64425170 - miRNA KNOWN NA 102 102 1 ENSG00000271605.4 MILR1 chr17 64449037 64468643 + protein_coding KNOWN OTTHUMG00000185198.3 19607 1816 48 ENSG00000266804.1 AC234063.1 chr17 64462550 64462647 - miRNA NOVEL NA 98 98 1 ENSG00000256525.5 POLG2 chr17 64477785 64497036 - protein_coding KNOWN OTTHUMG00000178899.2 19252 3388 45 ENSG00000256826.1 AC138744.2 chr17 64491523 64491789 + processed_pseudogene KNOWN OTTHUMG00000132312.1 267 267 1 ENSG00000108654.10 DDX5 chr17 64499616 64508199 - protein_coding KNOWN OTTHUMG00000178936.7 8584 7319 182 ENSG00000265695.1 MIR3064 chr17 64500773 64500839 - miRNA KNOWN NA 67 67 1 ENSG00000235827.2 TUBB8P9 chr1 227506182 227508292 + unprocessed_pseudogene KNOWN OTTHUMG00000037623.1 2111 1276 4 ENSG00000266241.1 MIR5047 chr17 64501214 64501313 - miRNA KNOWN NA 100 100 1 ENSG00000258890.5 CEP95 chr17 64506588 64542461 + protein_coding KNOWN OTTHUMG00000179174.5 35874 8048 124 ENSG00000108854.14 SMURF2 chr17 64542295 64662068 - protein_coding KNOWN OTTHUMG00000179189.1 119774 6961 79 ENSG00000271779.1 RP11-87N3.6 chr17 64572829 64573081 + processed_pseudogene KNOWN OTTHUMG00000185414.1 253 253 1 ENSG00000274483.1 AC132812.1 chr17 64662278 64662378 - miRNA NOVEL NA 101 101 1 ENSG00000270714.1 MINOS1P2 chr17 64747264 64747492 - processed_pseudogene KNOWN OTTHUMG00000184949.1 229 229 1 ENSG00000215769.7 RP13-104F24.2 chr17 64749663 64781707 - processed_transcript NOVEL OTTHUMG00000179291.1 32045 3038 17 ENSG00000266820.1 RP13-104F24.1 chr17 64749918 64758603 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000179292.1 8686 848 6 ENSG00000265298.1 RP13-104F24.3 chr17 64750420 64751311 + unprocessed_pseudogene KNOWN OTTHUMG00000179293.1 892 892 1 ENSG00000263647.1 RP11-927P21.5 chr17 64761912 64762710 - unprocessed_pseudogene KNOWN OTTHUMG00000179294.1 799 492 2 ENSG00000227711.2 RP11-275O4.5 chr1 227509028 227520477 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000037610.2 11450 1368 11 ENSG00000265982.1 RP11-927P21.4 chr17 64778842 64778937 - unprocessed_pseudogene KNOWN OTTHUMG00000179295.1 96 96 1 ENSG00000214176.8 PLEKHM1P chr17 64779259 64837154 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000179296.2 57896 8469 59 ENSG00000278581.1 MIR6080 chr17 64780759 64780824 + miRNA KNOWN NA 66 66 1 ENSG00000252242.1 RNU7-115P chr17 64825765 64825819 - snRNA KNOWN NA 55 55 1 ENSG00000272400.1 RP11-927P21.7 chr17 64847386 64847728 + unprocessed_pseudogene KNOWN OTTHUMG00000185415.1 343 343 1 ENSG00000176809.9 LRRC37A3 chr17 64854312 64919480 - protein_coding KNOWN OTTHUMG00000132307.3 65169 7641 86 ENSG00000264840.1 RN7SL404P chr17 64871504 64871784 - misc_RNA KNOWN NA 281 281 1 ENSG00000272134.1 RP11-927P21.8 chr17 64881091 64881181 + processed_pseudogene KNOWN OTTHUMG00000185416.1 91 91 1 ENSG00000272220.1 RP11-927P21.9 chr17 64892728 64892845 + transcribed_processed_pseudogene KNOWN OTTHUMG00000185417.1 118 118 1 ENSG00000265218.1 RP11-927P21.1 chr17 64892729 64910180 + antisense NOVEL OTTHUMG00000179297.1 17452 1357 6 ENSG00000202264.1 RNA5SP77 chr1 227561181 227561300 + rRNA KNOWN NA 120 120 1 ENSG00000266644.1 RP11-927P21.2 chr17 64899766 64900716 + antisense NOVEL OTTHUMG00000179298.1 951 560 2 ENSG00000271974.1 RP11-927P21.12 chr17 64905883 64906018 - transcribed_processed_pseudogene KNOWN OTTHUMG00000185418.1 136 136 1 ENSG00000264057.1 RP11-583F2.1 chr17 64927634 64934203 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000179312.1 6570 968 10 ENSG00000266155.2 RP11-927P21.6 chr17 64936485 64940229 - unprocessed_pseudogene KNOWN OTTHUMG00000179313.2 3745 257 2 ENSG00000280299.1 RP11-583F2.7 chr17 64940602 64954177 + processed_transcript NOVEL OTTHUMG00000189463.1 13576 625 2 ENSG00000272346.2 RP11-927P21.11 chr17 64940606 64940717 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000185419.2 112 112 1 ENSG00000265912.1 RP11-583F2.2 chr17 64943262 64951054 + lincRNA NOVEL OTTHUMG00000179315.1 7793 2474 2 ENSG00000272006.1 RP11-583F2.6 chr17 64951498 64951609 - processed_pseudogene KNOWN OTTHUMG00000185420.1 112 112 1 ENSG00000232457.4 SLC16A6P1 chr17 64953683 64956546 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000179314.1 2864 1059 2 ENSG00000214174.7 AMZ2P1 chr17 64966550 64975576 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000132075.2 9027 3858 14 ENSG00000181450.16 ZNF678 chr1 227563543 227677443 + protein_coding KNOWN OTTHUMG00000037700.3 113901 8915 21 ENSG00000120063.8 GNA13 chr17 65010715 65056839 - protein_coding KNOWN OTTHUMG00000179316.1 46125 5104 8 ENSG00000266598.1 RP11-583F2.5 chr17 65051909 65053308 + antisense NOVEL OTTHUMG00000179317.1 1400 537 2 ENSG00000263470.1 RP11-160O5.1 chr17 65100812 65111058 + lincRNA NOVEL OTTHUMG00000179318.1 10247 664 3 ENSG00000108370.14 RGS9 chr17 65137431 65227703 + protein_coding KNOWN OTTHUMG00000179349.1 90273 3664 115 ENSG00000265883.1 RP11-169I9.2 chr17 65185319 65185482 - processed_pseudogene KNOWN OTTHUMG00000179351.1 164 164 1 ENSG00000263520.1 CTD-2535L24.3 chr17 65457541 65458408 + lincRNA NOVEL OTTHUMG00000179538.1 868 277 3 ENSG00000168646.11 AXIN2 chr17 65528563 65561647 - protein_coding KNOWN OTTHUMG00000179353.1 33085 5226 44 ENSG00000266076.1 CTD-2535L24.2 chr17 65538102 65641033 - protein_coding NOVEL OTTHUMG00000179524.1 102932 1616 7 ENSG00000154240.15 CEP112 chr17 65635538 66192084 - protein_coding KNOWN OTTHUMG00000179474.3 556547 7849 165 ENSG00000271587.1 GS1-531I17.3 chr17 65644308 65644617 + processed_pseudogene KNOWN OTTHUMG00000185049.2 310 310 1 ENSG00000204464.6 C1orf195 chr1 15164344 15171317 - protein_coding KNOWN OTTHUMG00000037852.1 6974 559 6 ENSG00000225934.2 RP4-566D2.1 chr1 227598424 227599094 - processed_pseudogene KNOWN OTTHUMG00000037699.2 671 671 1 ENSG00000270870.1 GS1-531I17.2 chr17 65654914 65655395 + processed_pseudogene KNOWN OTTHUMG00000184849.1 482 482 1 ENSG00000266707.1 PSMD7P1 chr17 66197693 66198238 + processed_pseudogene KNOWN OTTHUMG00000179529.1 546 546 1 ENSG00000091583.9 APOH chr17 66212033 66256525 - protein_coding KNOWN OTTHUMG00000179530.3 44493 1332 23 ENSG00000252653.1 RNA5SP444 chr17 66267743 66267848 + rRNA KNOWN NA 106 106 1 ENSG00000154229.10 PRKCA chr17 66302636 66810743 + protein_coding KNOWN OTTHUMG00000179533.2 508108 11152 47 ENSG00000244044.3 RN7SL735P chr17 66364029 66364320 + misc_RNA KNOWN NA 292 292 1 ENSG00000264630.4 PRKCA-AS1 chr17 66398069 66416854 - antisense NOVEL OTTHUMG00000179537.1 18786 2647 8 ENSG00000252685.1 RNU6-928P chr17 66638271 66638374 + snRNA KNOWN NA 104 104 1 ENSG00000251698.1 RNA5SP445 chr17 66639269 66639383 + rRNA KNOWN NA 115 115 1 ENSG00000229330.2 AC006947.1 chr17 66676372 66677404 + sense_intronic NOVEL OTTHUMG00000132305.2 1033 484 3 ENSG00000265216.1 AL592310.1 chr1 227645280 227645366 + miRNA NOVEL NA 87 87 1 ENSG00000207943.1 MIR634 chr17 66787072 66787168 + miRNA KNOWN NA 97 97 1 ENSG00000075429.7 CACNG5 chr17 66835117 66885486 + protein_coding KNOWN OTTHUMG00000166468.1 50370 1311 11 ENSG00000251764.1 RNA5SP446 chr17 66895491 66895572 + rRNA KNOWN NA 82 82 1 ENSG00000075461.5 CACNG4 chr17 66964910 67033398 + protein_coding KNOWN OTTHUMG00000179550.1 68489 3380 4 ENSG00000264491.1 RP11-349A8.3 chr17 67019934 67021743 - antisense NOVEL OTTHUMG00000179551.1 1810 460 2 ENSG00000265664.1 RP11-74H8.1 chr17 67032409 67033290 - antisense NOVEL OTTHUMG00000179552.1 882 229 2 ENSG00000108878.4 CACNG1 chr17 67044590 67056797 + protein_coding KNOWN OTTHUMG00000179553.2 12208 1266 4 ENSG00000198265.10 HELZ chr17 67070438 67245989 - protein_coding KNOWN OTTHUMG00000179555.1 175552 15677 148 ENSG00000264421.1 RP11-401F2.4 chr17 67224303 67225541 + antisense NOVEL OTTHUMG00000179574.1 1239 380 2 ENSG00000213180.4 RPL36AP48 chr17 67224728 67225041 + processed_pseudogene KNOWN OTTHUMG00000157925.1 314 314 1 ENSG00000215812.5 ZNF847P chr1 227696892 227706699 - unprocessed_pseudogene KNOWN OTTHUMG00000037696.2 9808 1077 5 ENSG00000266473.1 RP11-401F2.3 chr17 67244837 67245806 + antisense NOVEL OTTHUMG00000179556.1 970 689 2 ENSG00000200619.1 RNA5SP447 chr17 67268110 67268228 + rRNA KNOWN NA 119 119 1 ENSG00000207410.1 SNORA8 chr17 67271469 67271607 + snoRNA NOVEL NA 139 139 1 ENSG00000264093.1 RP11-401F2.2 chr17 67276118 67276351 - processed_pseudogene KNOWN OTTHUMG00000179557.1 234 234 1 ENSG00000197170.8 PSMD12 chr17 67337916 67366627 - protein_coding KNOWN OTTHUMG00000140376.2 28712 5364 56 ENSG00000154217.13 PITPNC1 chr17 67377281 67697261 + protein_coding KNOWN OTTHUMG00000179602.1 319981 7819 50 ENSG00000201547.1 Y_RNA chr17 67408774 67408881 - misc_RNA NOVEL NA 108 108 1 ENSG00000244610.3 RN7SL756P chr17 67457023 67457290 - misc_RNA KNOWN NA 268 268 1 ENSG00000207688.2 MIR548D2 chr17 67471489 67471585 + miRNA KNOWN NA 97 97 1 ENSG00000264754.1 CTD-2653B5.1 chr17 67524481 67525422 + sense_intronic NOVEL OTTHUMG00000179581.1 942 612 2 ENSG00000143740.13 SNAP47 chr1 227728539 227781231 + protein_coding KNOWN OTTHUMG00000037697.5 52693 6580 47 ENSG00000279917.1 RP11-360N9.2 chr17 67611277 67613822 + TEC KNOWN OTTHUMG00000179603.1 2546 2546 1 ENSG00000279361.1 RP11-360N9.3 chr17 67637774 67638973 + TEC KNOWN OTTHUMG00000179604.1 1200 1200 1 ENSG00000130935.8 NOL11 chr17 67717833 67744531 + protein_coding KNOWN OTTHUMG00000179777.1 26699 4713 73 ENSG00000277123.1 AC006534.3 chr17 67720543 67720618 + miRNA NOVEL NA 76 76 1 ENSG00000200394.1 SNORA38B chr17 67740669 67740799 + snoRNA KNOWN NA 131 131 1 ENSG00000266858.1 RP11-557B23.3 chr17 67774591 67777324 - unprocessed_pseudogene KNOWN OTTHUMG00000179778.1 2734 862 4 ENSG00000213179.4 RPL17P41 chr17 67784753 67785293 + processed_pseudogene KNOWN OTTHUMG00000157927.1 541 541 1 ENSG00000222548.2 AC006534.1 chr17 67813582 67813654 + miRNA NOVEL NA 73 73 1 ENSG00000171634.15 BPTF chr17 67825524 67984378 + protein_coding KNOWN OTTHUMG00000132254.3 158855 15098 175 ENSG00000265086.1 AC006534.2 chr17 67843945 67844014 + miRNA NOVEL NA 70 70 1 ENSG00000081692.11 JMJD4 chr1 227730425 227735411 - protein_coding KNOWN OTTHUMG00000037698.3 4987 4315 32 ENSG00000266717.1 RP11-855A2.3 chr17 67950885 67951746 - antisense NOVEL OTTHUMG00000179779.1 862 709 2 ENSG00000279573.1 RP11-855A2.1 chr17 67955314 67957291 + TEC KNOWN OTTHUMG00000179780.1 1978 1978 1 ENSG00000279880.1 RP11-855A2.2 chr17 67973934 67976072 + TEC KNOWN OTTHUMG00000179781.1 2139 2139 1 ENSG00000265052.2 RN7SL622P chr17 67977698 67977972 + misc_RNA KNOWN NA 275 275 1 ENSG00000186665.8 C17orf58 chr17 67991101 67993649 - protein_coding KNOWN OTTHUMG00000179782.1 2549 1752 8 ENSG00000266176.1 RP11-855A2.5 chr17 67993880 67996431 - lincRNA NOVEL OTTHUMG00000179783.1 2552 414 2 ENSG00000182481.7 KPNA2 chr17 68035519 68046842 + protein_coding KNOWN OTTHUMG00000179784.1 11324 3140 41 ENSG00000266117.1 FBXO36P1 chr17 68095068 68095757 + processed_pseudogene KNOWN OTTHUMG00000179785.1 690 471 2 ENSG00000265055.1 AC145343.2 chr17 68096046 68101474 - lincRNA NOVEL OTTHUMG00000179786.1 5429 650 5 ENSG00000278219.1 AC145343.1 chr17 68101538 68101639 + miRNA NOVEL NA 102 102 1 ENSG00000230005.2 SNAP47-AS1 chr1 227743831 227747191 - antisense NOVEL OTTHUMG00000041233.3 3361 1708 2 ENSG00000237854.3 LINC00674 chr17 68101908 68115518 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000132303.3 13611 734 5 ENSG00000267023.4 LRRC37A16P chr17 68125777 68152468 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000180160.2 26692 3815 23 ENSG00000278730.1 RP11-147L13.11 chr17 68126666 68129586 + lincRNA NOVEL OTTHUMG00000186693.1 2921 2921 1 ENSG00000274561.1 RP11-147L13.12 chr17 68131462 68131907 + lincRNA NOVEL OTTHUMG00000186694.1 446 446 1 ENSG00000277476.1 RP11-147L13.13 chr17 68133201 68135935 + lincRNA NOVEL OTTHUMG00000186695.2 2735 2735 1 ENSG00000267352.1 SH3GL1P3 chr17 68134675 68135604 - processed_pseudogene KNOWN OTTHUMG00000180161.1 930 930 1 ENSG00000267708.1 RP11-147L13.7 chr17 68152776 68159043 - unprocessed_pseudogene KNOWN OTTHUMG00000180172.2 6268 579 6 ENSG00000278740.1 RP11-147L13.14 chr17 68188547 68189165 + lincRNA NOVEL OTTHUMG00000186696.1 619 619 1 ENSG00000267731.1 RP11-147L13.8 chr17 68189884 68192802 + lincRNA NOVEL OTTHUMG00000180173.1 2919 2919 1 ENSG00000267472.1 LOC440461 chr17 68198921 68199596 + processed_pseudogene KNOWN OTTHUMG00000180174.1 676 676 1 ENSG00000185888.5 PRSS38 chr1 227815693 227846470 + protein_coding KNOWN OTTHUMG00000037701.1 30778 1267 5 ENSG00000274712.1 RP11-147L13.15 chr17 68205489 68207493 + lincRNA NOVEL OTTHUMG00000186697.1 2005 2005 1 ENSG00000265100.1 RP11-147L13.2 chr17 68246629 68247938 - antisense NOVEL OTTHUMG00000179801.1 1310 1310 1 ENSG00000196704.10 AMZ2 chr17 68247574 68257164 + protein_coding KNOWN OTTHUMG00000179802.2 9591 4214 110 ENSG00000141337.11 ARSG chr17 68259182 68422731 + protein_coding KNOWN OTTHUMG00000179810.4 163550 6587 58 ENSG00000108932.10 SLC16A6 chr17 68267026 68291267 - protein_coding KNOWN OTTHUMG00000179812.2 24242 4061 29 ENSG00000267009.5 RP11-120M18.2 chr17 68413623 68524949 + processed_transcript NOVEL OTTHUMG00000180138.3 111327 1863 16 ENSG00000070540.11 WIPI1 chr17 68420948 68457513 - protein_coding KNOWN OTTHUMG00000179873.2 36566 3402 81 ENSG00000207561.1 MIR635 chr17 68424451 68424548 - miRNA KNOWN NA 98 98 1 ENSG00000108946.13 PRKAR1A chr17 68511780 68551319 + protein_coding KNOWN OTTHUMG00000180128.3 39540 6821 148 ENSG00000108950.10 FAM20A chr17 68535113 68601389 - protein_coding KNOWN OTTHUMG00000180152.2 66277 6203 55 ENSG00000143816.7 WNT9A chr1 227918656 227947898 - protein_coding KNOWN OTTHUMG00000037592.1 29243 3971 4 ENSG00000267461.1 RP11-120M18.5 chr17 68557516 68582577 + lincRNA NOVEL OTTHUMG00000180162.1 25062 384 3 ENSG00000267659.4 LINC01482 chr17 68591796 68763882 + lincRNA NOVEL OTTHUMG00000180190.1 172087 3686 15 ENSG00000263690.1 AC011591.1 chr17 68766473 68766559 - miRNA NOVEL NA 87 87 1 ENSG00000267250.1 RP11-118B18.2 chr17 68793549 68797822 - lincRNA NOVEL OTTHUMG00000180191.1 4274 518 2 ENSG00000141338.12 ABCA8 chr17 68867292 68955392 - protein_coding KNOWN OTTHUMG00000180192.3 88101 11243 217 ENSG00000231749.2 ABCA9-AS1 chr17 68944531 69042784 + antisense NOVEL OTTHUMG00000140370.3 98254 2990 31 ENSG00000154258.15 ABCA9 chr17 68974488 69061064 - protein_coding KNOWN OTTHUMG00000140371.2 86577 9139 102 ENSG00000154262.11 ABCA6 chr17 69078702 69141888 - protein_coding KNOWN OTTHUMG00000180258.1 63187 14151 81 ENSG00000267361.1 LOC100421166 chr17 69094289 69095499 - processed_pseudogene KNOWN OTTHUMG00000180259.1 1211 1211 1 ENSG00000265331.1 MIR4524B chr17 69099542 69099656 + miRNA KNOWN NA 115 115 1 ENSG00000264483.1 MIR5008 chr1 227941590 227941683 - miRNA KNOWN NA 94 94 1 ENSG00000154263.16 ABCA10 chr17 69147214 69244846 - protein_coding KNOWN OTTHUMG00000164716.6 97633 8405 198 ENSG00000278873.1 RP11-293K20.3 chr17 69232963 69235012 - TEC KNOWN OTTHUMG00000180278.1 2050 2050 1 ENSG00000154265.14 ABCA5 chr17 69244311 69327244 - protein_coding KNOWN OTTHUMG00000180303.2 82934 13158 204 ENSG00000267203.1 SNRPGP4 chr17 69318733 69318961 + processed_pseudogene KNOWN OTTHUMG00000180310.1 229 229 1 ENSG00000252352.1 SNORA40 chr17 69355133 69355218 - snoRNA NOVEL NA 86 86 1 ENSG00000108984.12 MAP2K6 chr17 69414698 69543331 + protein_coding KNOWN OTTHUMG00000180311.1 128634 6125 74 ENSG00000278972.1 CTD-3022L24.1 chr17 69433084 69435533 + TEC KNOWN OTTHUMG00000180312.1 2450 2450 1 ENSG00000267653.1 RP1-193H18.3 chr17 69477139 69501755 - lincRNA NOVEL OTTHUMG00000180313.1 24617 584 3 ENSG00000267194.1 RP1-193H18.2 chr17 69551358 69553861 + lincRNA NOVEL OTTHUMG00000180314.1 2504 2504 1 ENSG00000227517.5 LINC01483 chr17 69577251 69903000 + lincRNA NOVEL OTTHUMG00000132249.3 325750 4173 18 ENSG00000233003.4 CICP26 chr1 227975390 227978193 - unprocessed_pseudogene KNOWN OTTHUMG00000057827.2 2804 2448 3 ENSG00000267184.1 RP1-200G19.1 chr17 69707193 69707373 - processed_pseudogene KNOWN OTTHUMG00000180320.1 181 181 1 ENSG00000252100.2 AC002539.2 chr17 69948861 69948947 - miRNA NOVEL NA 87 87 1 ENSG00000237560.4 LINC01497 chr17 69961707 69983538 + lincRNA NOVEL OTTHUMG00000132247.1 21832 720 10 ENSG00000199801.1 Y_RNA chr17 69985986 69986094 + misc_RNA NOVEL NA 109 109 1 ENSG00000230258.5 AC002539.1 chr17 70017324 70128859 - antisense NOVEL OTTHUMG00000132246.2 111536 1100 12 ENSG00000267603.1 LINC01028 chr17 70051277 70068095 + lincRNA NOVEL OTTHUMG00000180348.1 16819 1163 5 ENSG00000153822.12 KCNJ16 chr17 70053429 70135608 + protein_coding KNOWN OTTHUMG00000180349.2 82180 6340 42 ENSG00000267365.1 KCNJ2-AS1 chr17 70166961 70169402 - antisense KNOWN OTTHUMG00000180350.1 2442 2442 1 ENSG00000123700.4 KCNJ2 chr17 70168673 70180048 + protein_coding KNOWN OTTHUMG00000180351.1 11376 5577 4 ENSG00000267170.1 CALM2P1 chr17 70241324 70241761 + processed_pseudogene KNOWN OTTHUMG00000180352.1 438 438 1 ENSG00000268663.1 WBP1LP6 chr1 674842 675265 + processed_pseudogene KNOWN OTTHUMG00000002340.3 424 424 1 ENSG00000215720.4 RP1-21O18.3 chr1 15191828 15192845 - processed_pseudogene KNOWN OTTHUMG00000002045.2 1018 710 2 ENSG00000274886.1 RP11-192I3.3 chr1 227980051 227980227 + unprocessed_pseudogene KNOWN OTTHUMG00000187550.1 177 177 1 ENSG00000267109.1 CTD-2378E21.1 chr17 70312831 70368916 - lincRNA NOVEL OTTHUMG00000180360.1 56086 734 3 ENSG00000267471.1 RP11-1058G23.1 chr17 70628917 70629265 - processed_pseudogene KNOWN OTTHUMG00000180361.1 349 349 1 ENSG00000271239.1 RP11-238F2.1 chr17 70778604 70779230 - lincRNA NOVEL OTTHUMG00000185122.1 627 627 1 ENSG00000271101.1 RP11-1003J3.1 chr17 71011997 71013587 + processed_pseudogene KNOWN OTTHUMG00000184848.1 1591 1256 2 ENSG00000260785.1 CASC17 chr17 71097775 71202177 - lincRNA NOVEL OTTHUMG00000176079.1 104403 2059 4 ENSG00000238759.1 RNU7-155P chr17 71298156 71298218 - snRNA KNOWN NA 63 63 1 ENSG00000225818.1 AC118653.2 chr17 71596338 71597279 + lincRNA NOVEL OTTHUMG00000132240.1 942 570 4 ENSG00000228118.3 LOC124685 chr17 71620978 71621436 + processed_pseudogene KNOWN OTTHUMG00000132241.1 459 459 1 ENSG00000228639.5 AC005152.3 chr17 72021851 72034092 - lincRNA NOVEL OTTHUMG00000132237.2 12242 540 5 ENSG00000256124.4 LINC01152 chr17 72030291 72041297 + lincRNA NOVEL OTTHUMG00000168039.2 11007 4019 8 ENSG00000154342.5 WNT3A chr1 228007051 228061260 + protein_coding KNOWN OTTHUMG00000037593.1 54210 2932 4 ENSG00000234899.8 SOX9-AS1 chr17 72034107 72237203 - processed_transcript KNOWN OTTHUMG00000132234.7 203097 10700 69 ENSG00000226101.1 AC007461.2 chr17 72072333 72093481 + lincRNA NOVEL OTTHUMG00000132235.1 21149 2063 6 ENSG00000125398.5 SOX9 chr17 72121020 72126420 + protein_coding KNOWN OTTHUMG00000166300.1 5401 3935 3 ENSG00000227036.5 LINC00511 chr17 72323123 72640472 - lincRNA KNOWN OTTHUMG00000132227.4 317350 8615 52 ENSG00000264026.1 RP11-1124B17.1 chr17 72342940 72355136 + lincRNA NOVEL OTTHUMG00000178301.1 12197 1833 4 ENSG00000263680.2 RP11-57A1.1 chr17 72425939 72428852 + lincRNA NOVEL OTTHUMG00000178302.2 2914 833 2 ENSG00000243514.2 RPL32P33 chr17 72627231 72627624 + processed_pseudogene KNOWN OTTHUMG00000157932.2 394 394 1 ENSG00000263893.2 CTD-3010D24.3 chr17 72642731 72644490 + lincRNA NOVEL OTTHUMG00000178340.2 1760 889 2 ENSG00000133195.10 SLC39A11 chr17 72645949 73092712 - protein_coding KNOWN OTTHUMG00000178306.3 446764 5583 84 ENSG00000200783.1 RN7SKP180 chr17 72663823 72664152 - misc_RNA KNOWN NA 330 330 1 ENSG00000276255.2 RP5-881P19.7 chr1 228073909 228076550 - lincRNA NOVEL OTTHUMG00000189299.1 2642 2642 2 ENSG00000222545.1 AC080037.1 chr17 72714383 72714471 - miRNA NOVEL NA 89 89 1 ENSG00000252274.1 SCARNA24 chr17 72818836 72818972 - scaRNA NOVEL NA 137 137 1 ENSG00000264196.1 RP11-171G2.1 chr17 72839039 72839718 + antisense NOVEL OTTHUMG00000178318.1 680 624 2 ENSG00000266501.1 RP11-766H1.1 chr17 73067870 73068288 - processed_pseudogene KNOWN OTTHUMG00000178319.1 419 419 1 ENSG00000265469.1 POLR3KP2 chr17 73163035 73163359 - processed_pseudogene KNOWN OTTHUMG00000178342.1 325 325 1 ENSG00000264860.1 RP11-143K11.5 chr17 73164977 73196593 + processed_transcript NOVEL OTTHUMG00000178355.1 31617 588 3 ENSG00000180616.7 SSTR2 chr17 73165012 73176633 + protein_coding KNOWN OTTHUMG00000178343.3 11622 7852 5 ENSG00000166685.10 COG1 chr17 73192632 73208507 + protein_coding KNOWN OTTHUMG00000178344.2 15876 5317 66 ENSG00000277728.1 RP11-143K11.7 chr17 73202968 73203431 - antisense NOVEL OTTHUMG00000186698.1 464 464 1 ENSG00000133193.11 FAM104A chr17 73207353 73236753 - protein_coding KNOWN OTTHUMG00000150564.4 29401 3162 23 ENSG00000143761.12 ARF1 chr1 228082660 228099212 + protein_coding KNOWN OTTHUMG00000037595.3 16553 3281 64 ENSG00000141219.14 C17orf80 chr17 73232233 73248947 + protein_coding KNOWN OTTHUMG00000178417.1 16715 4663 41 ENSG00000265010.1 RP11-661C3.2 chr17 73243093 73244706 + sense_intronic NOVEL OTTHUMG00000178418.1 1614 321 2 ENSG00000187959.8 CPSF4L chr17 73248449 73262352 - protein_coding KNOWN OTTHUMG00000132640.2 13904 1528 13 ENSG00000179604.9 CDC42EP4 chr17 73283624 73312175 - protein_coding KNOWN OTTHUMG00000178419.1 28552 5007 22 ENSG00000069188.15 SDK2 chr17 73334384 73644089 - protein_coding KNOWN OTTHUMG00000152726.4 309706 11607 117 ENSG00000264985.1 RP11-449L23.2 chr17 73513685 73518770 + antisense NOVEL OTTHUMG00000178451.1 5086 2276 2 ENSG00000265780.1 RP11-449L23.3 chr17 73519846 73521407 + antisense NOVEL OTTHUMG00000178452.1 1562 1562 1 ENSG00000264750.1 RP11-277J6.2 chr17 73641026 73643106 + antisense NOVEL OTTHUMG00000178422.1 2081 173 2 ENSG00000265935.1 RP11-277J6.3 chr17 73662568 73663848 - lincRNA NOVEL OTTHUMG00000178453.1 1281 403 2 ENSG00000263574.1 CTD-2532D12.4 chr17 73737854 73756557 + lincRNA NOVEL OTTHUMG00000178458.1 18704 1140 6 ENSG00000264944.1 MIR3620 chr1 228097263 228097341 + miRNA KNOWN NA 79 79 1 ENSG00000177338.12 LINC00469 chr17 73750330 73828520 - lincRNA KNOWN OTTHUMG00000167833.3 78191 1268 10 ENSG00000234721.2 AC125421.1 chr17 73786802 73800793 + lincRNA NOVEL OTTHUMG00000132223.2 13992 2498 9 ENSG00000265927.1 CTD-2532D12.5 chr17 73831572 73836019 - lincRNA NOVEL OTTHUMG00000178574.1 4448 1027 5 ENSG00000266765.1 CTD-2582D11.1 chr17 73894749 73911878 - lincRNA NOVEL OTTHUMG00000178575.1 17130 419 2 ENSG00000266357.4 RP11-101O21.1 chr17 74043452 74154212 - lincRNA NOVEL OTTHUMG00000178576.1 110761 885 9 ENSG00000172809.11 RPL38 chr17 74203582 74210655 + protein_coding KNOWN OTTHUMG00000166016.2 7074 3829 31 ENSG00000246731.2 MGC16275 chr17 74209980 74213342 - antisense NOVEL OTTHUMG00000166017.1 3363 2522 6 ENSG00000141540.9 TTYH2 chr17 74213514 74262020 + protein_coding KNOWN OTTHUMG00000166018.3 48507 5375 69 ENSG00000264272.1 CTD-2514K5.4 chr17 74256896 74262020 - antisense NOVEL OTTHUMG00000178577.1 5125 513 2 ENSG00000171595.12 DNAI2 chr17 74274247 74314884 + protein_coding KNOWN OTTHUMG00000178578.1 40638 2851 69 ENSG00000143793.11 C1orf35 chr1 228100726 228105411 - protein_coding KNOWN OTTHUMG00000037793.2 4686 4308 43 ENSG00000266106.1 RP11-647F2.2 chr17 74307210 74309790 - antisense NOVEL OTTHUMG00000178579.1 2581 651 2 ENSG00000196169.13 KIF19 chr17 74326210 74355820 + protein_coding KNOWN OTTHUMG00000150694.2 29611 5640 60 ENSG00000204347.3 BTBD17 chr17 74356416 74361946 - protein_coding KNOWN OTTHUMG00000178580.1 5531 1805 3 ENSG00000257008.5 GPR142 chr17 74367407 74372622 + protein_coding KNOWN OTTHUMG00000178581.1 5216 1608 12 ENSG00000200021.1 RNA5SP448 chr17 74417594 74417704 - rRNA KNOWN NA 111 111 1 ENSG00000170412.15 GPRC5C chr17 74424851 74451653 + protein_coding KNOWN OTTHUMG00000067613.4 26803 8005 35 ENSG00000167851.12 CD300A chr17 74466416 74484796 + protein_coding KNOWN OTTHUMG00000067612.3 18381 2686 36 ENSG00000178789.7 CD300LB chr17 74521174 74531474 - protein_coding KNOWN OTTHUMG00000067606.3 10301 2720 7 ENSG00000167850.3 CD300C chr17 74541108 74546143 - protein_coding KNOWN OTTHUMG00000067608.1 5036 1517 4 ENSG00000236770.1 AC079325.5 chr17 74549399 74552737 - unprocessed_pseudogene KNOWN OTTHUMG00000067610.1 3339 857 4 ENSG00000162910.17 MRPL55 chr1 228106679 228109312 - protein_coding KNOWN OTTHUMG00000037965.7 2634 1886 136 ENSG00000231027.1 AC079325.6 chr17 74560716 74567343 - unprocessed_pseudogene KNOWN OTTHUMG00000067607.1 6628 501 4 ENSG00000204345.1 CD300LD chr17 74579365 74592283 - protein_coding KNOWN OTTHUMG00000067614.1 12919 1303 4 ENSG00000182352.7 C17orf77 chr17 74584679 74594209 + lincRNA KNOWN OTTHUMG00000067611.3 9531 2778 8 ENSG00000261222.2 CTD-2006K23.1 chr17 74599840 74607229 + lincRNA NOVEL OTTHUMG00000176084.2 7390 3602 5 ENSG00000186407.6 CD300E chr17 74609887 74623738 - protein_coding KNOWN OTTHUMG00000067605.3 13852 3752 6 ENSG00000172794.18 RAB37 chr17 74670578 74747335 + protein_coding KNOWN OTTHUMG00000134282.4 76758 5074 116 ENSG00000264659.1 CTD-2006K23.2 chr17 74672712 74677600 - antisense NOVEL OTTHUMG00000178861.1 4889 523 2 ENSG00000186074.17 CD300LF chr17 74694311 74712978 - protein_coding KNOWN OTTHUMG00000067609.3 18668 2161 60 ENSG00000266036.1 RP11-452I5.2 chr17 74747319 74748912 - antisense NOVEL OTTHUMG00000178862.1 1594 565 2 ENSG00000264624.1 MIR3615 chr17 74748613 74748699 + miRNA KNOWN NA 87 87 1 ENSG00000224566.2 FAM96AP2 chr1 228114997 228115473 - processed_pseudogene KNOWN OTTHUMG00000039501.2 477 477 1 ENSG00000109062.8 SLC9A3R1 chr17 74748652 74769353 + protein_coding KNOWN OTTHUMG00000178863.2 20702 2315 21 ENSG00000109065.10 NAT9 chr17 74770547 74776367 - protein_coding KNOWN OTTHUMG00000178870.4 5821 4049 146 ENSG00000109066.12 TMEM104 chr17 74776483 74839779 + protein_coding KNOWN OTTHUMG00000179025.1 63297 4983 51 ENSG00000161509.12 GRIN2C chr17 74842023 74861504 - protein_coding KNOWN OTTHUMG00000044524.3 19482 8574 38 ENSG00000161513.10 FDXR chr17 74862497 74873031 - protein_coding KNOWN OTTHUMG00000179026.7 10535 3599 178 ENSG00000172782.10 FADS6 chr17 74877299 74893781 - protein_coding KNOWN OTTHUMG00000179188.4 16483 2861 21 ENSG00000182040.7 USH1G chr17 74916084 74923256 - protein_coding KNOWN OTTHUMG00000178864.4 7173 3558 6 ENSG00000183034.11 OTOP2 chr17 74924275 74933912 + protein_coding KNOWN OTTHUMG00000179215.1 9638 2778 17 ENSG00000281273.1 AC087651.1 chr17 74935426 74936187 - protein_coding NOVEL NA 762 63 3 ENSG00000182938.4 OTOP3 chr17 74935719 74949992 + protein_coding KNOWN OTTHUMG00000179216.1 14274 2516 14 ENSG00000280157.1 RP11-520H14.7 chr1 228121523 228123771 + TEC KNOWN OTTHUMG00000176322.1 2249 2249 1 ENSG00000167861.14 HID1 chr17 74950743 74973166 - protein_coding KNOWN OTTHUMG00000166490.5 22424 6196 90 ENSG00000263586.1 HID1-AS1 chr17 74970704 74975728 + antisense NOVEL OTTHUMG00000179217.1 5025 815 3 ENSG00000109089.7 CDR2L chr17 74987632 75005800 + protein_coding KNOWN OTTHUMG00000150435.1 18169 3536 5 ENSG00000167862.8 ICT1 chr17 75012670 75021261 + protein_coding KNOWN OTTHUMG00000179218.2 8592 1108 21 ENSG00000252545.1 RNU6-362P chr17 75031097 75031186 + snRNA KNOWN NA 90 90 1 ENSG00000180901.9 KCTD2 chr17 75032575 75065889 + protein_coding KNOWN OTTHUMG00000179276.1 33315 5279 48 ENSG00000281674.1 AC087651.2 chr17 75038085 75038357 + protein_coding NOVEL NA 273 63 3 ENSG00000167863.10 ATP5H chr17 75038863 75046985 - protein_coding KNOWN OTTHUMG00000179219.1 8123 3231 21 ENSG00000239607.3 RN7SL573P chr17 75041740 75042015 + misc_RNA KNOWN NA 276 276 1 ENSG00000270993.1 RP11-1112G13.3 chr17 75060491 75060620 - processed_pseudogene KNOWN OTTHUMG00000184948.1 130 130 1 ENSG00000227625.2 RP11-520H14.1 chr1 228134785 228134992 - processed_pseudogene KNOWN OTTHUMG00000039502.2 208 208 1 ENSG00000232724.1 AC111186.1 chr17 75074306 75079549 + unitary_pseudogene KNOWN OTTHUMG00000154700.1 5244 2848 4 ENSG00000170190.14 SLC16A5 chr17 75087727 75106162 + protein_coding KNOWN OTTHUMG00000179277.2 18436 3089 50 ENSG00000206713.1 Y_RNA chr17 75089862 75089974 - misc_RNA NOVEL NA 113 113 1 ENSG00000125449.5 ARMC7 chr17 75109952 75130265 + protein_coding KNOWN OTTHUMG00000179345.1 20314 2823 14 ENSG00000125458.5 NT5C chr17 75130225 75131795 - protein_coding KNOWN OTTHUMG00000179346.2 1571 1571 53 ENSG00000279035.1 RP11-649A18.3 chr17 75130883 75133043 + TEC KNOWN OTTHUMG00000179347.1 2161 2161 1 ENSG00000189159.14 HN1 chr17 75135248 75168281 - protein_coding KNOWN OTTHUMG00000154521.2 33034 3414 54 ENSG00000265800.1 RP11-649A18.5 chr17 75138416 75141350 - sense_intronic NOVEL OTTHUMG00000179478.1 2935 400 2 ENSG00000263786.1 RP11-649A18.4 chr17 75145261 75146546 - sense_intronic NOVEL OTTHUMG00000179479.1 1286 717 2 ENSG00000252042.1 Y_RNA chr17 75145670 75145762 + misc_RNA NOVEL NA 93 93 1 ENSG00000278480.1 RP5-903E17.2 chr1 15226373 15227549 + processed_pseudogene KNOWN OTTHUMG00000187520.1 1177 966 2 ENSG00000143774.15 GUK1 chr1 228139962 228148984 + protein_coding KNOWN OTTHUMG00000039503.5 9023 4725 219 ENSG00000188612.10 SUMO2 chr17 75165586 75182983 - protein_coding KNOWN OTTHUMG00000179481.2 17398 3372 11 ENSG00000125450.9 NUP85 chr17 75205659 75235758 + protein_coding KNOWN OTTHUMG00000179482.2 30100 5193 192 ENSG00000125447.15 GGA3 chr17 75236599 75262363 - protein_coding KNOWN OTTHUMG00000179483.4 25765 6640 196 ENSG00000125445.9 MRPS7 chr17 75261674 75266373 + protein_coding KNOWN OTTHUMG00000179484.2 4700 3324 30 ENSG00000125457.12 MIF4GD chr17 75266228 75271227 - protein_coding KNOWN OTTHUMG00000179485.1 5000 2283 71 ENSG00000263843.1 RP11-649A18.12 chr17 75271369 75273895 + antisense NOVEL OTTHUMG00000179606.1 2527 2527 3 ENSG00000125454.10 SLC25A19 chr17 75272981 75289510 - protein_coding KNOWN OTTHUMG00000179607.1 16530 3316 81 ENSG00000177885.12 GRB2 chr17 75318076 75405709 - protein_coding KNOWN OTTHUMG00000134332.2 87634 4716 46 ENSG00000228007.1 AC011933.2 chr17 75338827 75339147 + processed_pseudogene KNOWN OTTHUMG00000132221.1 321 321 1 ENSG00000265987.1 RP11-16C1.3 chr17 75344405 75373662 + antisense NOVEL OTTHUMG00000179608.1 29258 403 2 ENSG00000198835.3 GJC2 chr1 228149852 228159826 + protein_coding KNOWN OTTHUMG00000039771.1 9975 2243 2 ENSG00000264853.1 RP11-16C1.2 chr17 75370947 75373736 - sense_intronic NOVEL OTTHUMG00000179609.1 2790 2790 1 ENSG00000265342.1 RP11-16C1.1 chr17 75394123 75394963 + antisense NOVEL OTTHUMG00000179610.1 841 372 2 ENSG00000264511.1 MIR3678 chr17 75406069 75406162 + miRNA KNOWN NA 94 94 1 ENSG00000223217.1 RNU6-938P chr17 75409086 75409188 - snRNA KNOWN NA 103 103 1 ENSG00000202332.1 Y_RNA chr17 75431990 75432087 + misc_RNA NOVEL NA 98 98 1 ENSG00000177728.13 KIAA0195 chr17 75441159 75500090 + protein_coding KNOWN OTTHUMG00000179611.4 58932 8854 272 ENSG00000265636.1 AC100787.1 chr17 75496645 75496756 + miRNA NOVEL NA 112 112 1 ENSG00000276372.1 MIR6785 chr17 75498548 75498628 + miRNA KNOWN NA 81 81 1 ENSG00000177303.8 CASKIN2 chr17 75500261 75515583 - protein_coding KNOWN OTTHUMG00000179683.1 15323 5823 61 ENSG00000182173.11 TSEN54 chr17 75516060 75524739 + protein_coding KNOWN OTTHUMG00000179684.1 8680 3440 59 ENSG00000203684.5 IBA57-AS1 chr1 228164086 228165512 - lincRNA KNOWN OTTHUMG00000039768.1 1427 641 4 ENSG00000073350.12 LLGL2 chr17 75525080 75575208 + protein_coding KNOWN OTTHUMG00000179685.1 50129 7909 213 ENSG00000266714.5 MYO15B chr17 75588058 75626849 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000179794.5 38792 13042 365 ENSG00000108469.13 RECQL5 chr17 75626845 75667189 - protein_coding KNOWN OTTHUMG00000179795.1 40345 8766 129 ENSG00000204323.5 SMIM5 chr17 75633434 75641404 + protein_coding KNOWN OTTHUMG00000167882.3 7971 5117 7 ENSG00000259120.2 SMIM6 chr17 75646243 75647977 + protein_coding KNOWN OTTHUMG00000179796.1 1735 1086 5 ENSG00000161526.13 SAP30BP chr17 75667116 75708062 + protein_coding KNOWN OTTHUMG00000179798.1 40947 8268 173 ENSG00000264829.1 RP11-474I11.8 chr17 75679474 75679967 - antisense NOVEL OTTHUMG00000179799.1 494 352 2 ENSG00000264270.1 RP11-474I11.7 chr17 75683543 75684799 - antisense NOVEL OTTHUMG00000179800.1 1257 637 4 ENSG00000132470.12 ITGB4 chr17 75721328 75757818 + protein_coding KNOWN OTTHUMG00000179814.1 36491 6761 234 ENSG00000108479.10 GALK1 chr17 75751594 75765711 - protein_coding KNOWN OTTHUMG00000179832.1 14118 2891 42 ENSG00000181873.11 IBA57 chr1 228165815 228182257 + protein_coding KNOWN OTTHUMG00000039769.2 16443 10219 9 ENSG00000132475.7 H3F3B chr17 75776434 75785893 - protein_coding KNOWN OTTHUMG00000179842.2 9460 6134 40 ENSG00000263565.1 MIR4738 chr17 75784521 75784607 - miRNA KNOWN NA 87 87 1 ENSG00000132478.8 UNK chr17 75784771 75825799 + protein_coding KNOWN OTTHUMG00000179892.2 41029 5575 41 ENSG00000266980.1 RP11-552F3.4 chr17 75818815 75820055 - antisense NOVEL OTTHUMG00000179894.1 1241 890 2 ENSG00000092929.10 UNC13D chr17 75827225 75844717 - protein_coding KNOWN OTTHUMG00000179895.2 17493 7752 172 ENSG00000132471.10 WBP2 chr17 75845699 75856507 - protein_coding KNOWN OTTHUMG00000179896.1 10809 5399 112 ENSG00000132481.5 TRIM47 chr17 75874161 75878575 - protein_coding KNOWN OTTHUMG00000179916.1 4415 3142 22 ENSG00000267801.1 RP11-552F3.9 chr17 75876372 75879546 + antisense NOVEL OTTHUMG00000179917.1 3175 3175 1 ENSG00000141569.9 TRIM65 chr17 75880335 75897003 - protein_coding KNOWN OTTHUMG00000132127.3 16669 3906 25 ENSG00000267342.1 RP11-552F3.10 chr17 75897060 75900148 + antisense NOVEL OTTHUMG00000179918.1 3089 1419 3 ENSG00000162913.9 C1orf145 chr1 228203506 228213664 - protein_coding KNOWN OTTHUMG00000039770.5 10159 3647 10 ENSG00000204316.11 MRPL38 chr17 75898643 75905413 - protein_coding KNOWN OTTHUMG00000152977.2 6771 3663 67 ENSG00000267426.4 RP11-552F3.12 chr17 75898645 75930129 - protein_coding NOVEL OTTHUMG00000180026.2 31485 5062 48 ENSG00000188878.15 FBF1 chr17 75909574 75941140 - protein_coding KNOWN OTTHUMG00000179919.3 31567 6731 162 ENSG00000281844.1 FBF1 chr17 75910723 75938149 - protein_coding KNOWN NA 27427 3402 28 ENSG00000161533.10 ACOX1 chr17 75941507 75979363 - protein_coding KNOWN OTTHUMG00000180027.1 37857 8472 85 ENSG00000267615.1 RP11-552F3.13 chr17 75943832 75945142 + antisense NOVEL OTTHUMG00000180028.1 1311 230 2 ENSG00000257949.5 TEN1 chr17 75979220 76000586 + protein_coding KNOWN OTTHUMG00000132686.4 21367 1303 18 ENSG00000261408.4 TEN1-CDK3 chr17 75979231 76005999 + protein_coding NOVEL OTTHUMG00000170136.1 26769 3898 27 ENSG00000250506.5 CDK3 chr17 76000906 76005999 + protein_coding KNOWN OTTHUMG00000154861.2 5094 1803 18 ENSG00000167880.6 EVPL chr17 76004502 76027452 - protein_coding KNOWN OTTHUMG00000180053.1 22951 7510 69 ENSG00000154358.18 OBSCN chr1 228208130 228378876 + protein_coding KNOWN OTTHUMG00000039772.9 170747 32289 466 ENSG00000167881.13 SRP68 chr17 76038775 76072653 - protein_coding KNOWN OTTHUMG00000180054.2 33879 7641 85 ENSG00000186919.11 ZACN chr17 76071961 76083666 + protein_coding KNOWN OTTHUMG00000157186.4 11706 4307 32 ENSG00000182687.3 GALR2 chr17 76074794 76077541 + protein_coding KNOWN OTTHUMG00000167479.1 2748 1364 2 ENSG00000182473.19 EXOC7 chr17 76081017 76121576 - protein_coding KNOWN OTTHUMG00000150720.9 40560 10086 209 ENSG00000279382.1 RP11-449J21.3 chr17 76090308 76091669 + TEC KNOWN OTTHUMG00000180119.1 1362 1362 1 ENSG00000275360.1 MIR6868 chr17 76098019 76098076 - miRNA KNOWN NA 58 58 1 ENSG00000129654.7 FOXJ1 chr17 76136333 76141299 - protein_coding KNOWN OTTHUMG00000180120.1 4967 2641 3 ENSG00000267128.1 RP11-449J21.5 chr17 76140556 76154650 + antisense NOVEL OTTHUMG00000180136.1 14095 2283 20 ENSG00000141576.13 RNF157 chr17 76142453 76240373 - protein_coding KNOWN OTTHUMG00000132627.3 97921 7802 61 ENSG00000267376.1 ATP5LP6 chr17 76202644 76202796 - processed_pseudogene KNOWN OTTHUMG00000180123.1 153 153 1 ENSG00000269890.1 RP5-1139B12.2 chr1 228270443 228274397 - antisense NOVEL OTTHUMG00000183900.1 3955 3955 1 ENSG00000228218.1 ATF4P3 chr17 76225751 76226806 - processed_pseudogene KNOWN OTTHUMG00000132653.1 1056 1056 1 ENSG00000185262.8 UBALD2 chr17 76265202 76271299 + protein_coding KNOWN OTTHUMG00000132666.3 6098 1797 8 ENSG00000129646.12 QRICH2 chr17 76274049 76307680 - protein_coding KNOWN OTTHUMG00000167578.1 33632 5457 57 ENSG00000161542.15 PRPSAP1 chr17 76309486 76384521 - protein_coding KNOWN OTTHUMG00000155969.3 75036 6939 62 ENSG00000251779.1 Y_RNA chr17 76319376 76319473 + misc_RNA NOVEL NA 98 98 1 ENSG00000207169.1 RNU6-24P chr17 76337316 76337422 + snRNA KNOWN NA 107 107 1 ENSG00000267518.1 RP11-794C22.2 chr17 76345761 76346081 + processed_pseudogene KNOWN OTTHUMG00000180176.1 321 321 1 ENSG00000176170.12 SPHK1 chr17 76376584 76387860 + protein_coding KNOWN OTTHUMG00000180177.1 11277 4416 53 ENSG00000175931.11 UBE2O chr17 76389451 76453206 - protein_coding KNOWN OTTHUMG00000180178.1 63756 6472 56 ENSG00000242931.1 RPL7P49 chr17 76430417 76431124 - processed_pseudogene KNOWN OTTHUMG00000157946.1 708 708 1 ENSG00000269934.1 RP5-1139B12.3 chr1 228274584 228276066 - antisense NOVEL OTTHUMG00000183901.1 1483 1483 3 ENSG00000129673.8 AANAT chr17 76453351 76470117 + protein_coding KNOWN OTTHUMG00000180179.1 16767 2190 18 ENSG00000129667.11 RHBDF2 chr17 76470891 76501790 - protein_coding KNOWN OTTHUMG00000180180.1 30900 6924 113 ENSG00000161544.8 CYGB chr17 76527356 76551175 - protein_coding KNOWN OTTHUMG00000180289.1 23820 2949 17 ENSG00000214140.9 PRCD chr17 76527586 76553578 + protein_coding KNOWN OTTHUMG00000132200.2 25993 5305 56 ENSG00000267546.2 RP11-666A8.8 chr17 76545668 76557683 - antisense NOVEL OTTHUMG00000180290.2 12016 1494 10 ENSG00000267543.1 RP11-666A8.7 chr17 76549951 76550826 + sense_intronic NOVEL OTTHUMG00000185721.1 876 570 2 ENSG00000272386.1 RP11-666A8.12 chr17 76551352 76551750 + sense_intronic NOVEL OTTHUMG00000180291.2 399 399 1 ENSG00000163597.13 SNHG16 chr17 76557766 76565348 + processed_transcript KNOWN OTTHUMG00000132201.2 7583 5362 24 ENSG00000274091.1 SNORD1C chr17 76558791 76558868 + snoRNA KNOWN NA 78 78 1 ENSG00000199961.1 SNORD1B chr17 76561109 76561192 + snoRNA KNOWN NA 84 84 1 ENSG00000270110.1 RP5-1139B12.4 chr1 228295911 228302998 - antisense NOVEL OTTHUMG00000183902.1 7088 764 2 ENSG00000278261.1 SNORD1A chr17 76561634 76561705 + snoRNA KNOWN NA 72 72 1 ENSG00000070731.8 ST6GALNAC2 chr17 76563710 76586956 - protein_coding KNOWN OTTHUMG00000180301.2 23247 7558 46 ENSG00000267078.1 RP11-666A8.9 chr17 76569792 76571240 + antisense NOVEL OTTHUMG00000180302.1 1449 1449 1 ENSG00000267084.1 RP11-666A8.11 chr17 76595584 76595772 - processed_pseudogene KNOWN OTTHUMG00000180368.1 189 189 1 ENSG00000070526.13 ST6GALNAC1 chr17 76624761 76643838 - protein_coding KNOWN OTTHUMG00000180369.1 19078 3448 55 ENSG00000199735.1 RNU6-227P chr17 76656320 76656422 + snRNA KNOWN NA 103 103 1 ENSG00000261335.1 RP11-318A15.2 chr17 76671942 76673658 + antisense NOVEL OTTHUMG00000176088.1 1717 1717 1 ENSG00000182534.12 MXRA7 chr17 76672551 76711016 - protein_coding KNOWN OTTHUMG00000180370.1 38466 9257 29 ENSG00000212418.1 RNY4P36 chr17 76703632 76703727 - misc_RNA KNOWN NA 96 96 1 ENSG00000277382.1 RP11-318A15.8 chr17 76709760 76710045 + antisense NOVEL OTTHUMG00000186700.1 286 286 1 ENSG00000270104.1 RP11-245P10.6 chr1 228384114 228385016 - lincRNA NOVEL OTTHUMG00000183903.1 903 574 2 ENSG00000070495.13 JMJD6 chr17 76712832 76726799 - protein_coding KNOWN OTTHUMG00000169267.3 13968 5969 45 ENSG00000274051.1 uc_338 chr17 76721216 76721396 - misc_RNA NOVEL NA 181 181 1 ENSG00000181038.12 METTL23 chr17 76726830 76733936 + protein_coding KNOWN OTTHUMG00000180371.2 7107 1914 63 ENSG00000267168.1 RP11-318A15.7 chr17 76732978 76738522 + protein_coding PUTATIVE OTTHUMG00000180483.1 5545 479 2 ENSG00000161547.13 SRSF2 chr17 76734115 76737374 - protein_coding KNOWN OTTHUMG00000177547.4 3260 3017 31 ENSG00000092931.10 MFSD11 chr17 76735865 76781449 + protein_coding KNOWN OTTHUMG00000180484.1 45585 6587 161 ENSG00000207556.1 MIR636 chr17 76736450 76736548 - miRNA KNOWN NA 99 99 1 ENSG00000200257.1 RNU6-97P chr17 76752912 76753015 + snRNA KNOWN NA 104 104 1 ENSG00000267065.2 CTD-2246P4.1 chr17 76799044 76807102 + lincRNA NOVEL OTTHUMG00000177702.2 8059 3085 3 ENSG00000267535.1 LINC00868 chr17 76850176 76861836 + lincRNA NOVEL OTTHUMG00000177703.1 11661 1047 7 ENSG00000142621.18 FHAD1 chr1 15247272 15400283 + protein_coding KNOWN OTTHUMG00000002088.10 153012 12805 215 ENSG00000154370.12 TRIM11 chr1 228393673 228406840 - protein_coding KNOWN OTTHUMG00000039773.5 13168 8493 26 ENSG00000167889.11 MGAT5B chr17 76868456 76950393 + protein_coding KNOWN OTTHUMG00000177278.4 81938 6386 87 ENSG00000267568.5 RP11-87G24.3 chr17 76950317 76969156 - processed_transcript NOVEL OTTHUMG00000177279.4 18840 969 8 ENSG00000267521.1 RP11-87G24.6 chr17 76957023 76958222 - lincRNA NOVEL OTTHUMG00000182200.1 1200 722 2 ENSG00000280122.1 RP11-87G24.2 chr17 76966285 76969530 - TEC KNOWN OTTHUMG00000177281.1 3246 3246 1 ENSG00000276202.1 Metazoa_SRP chr17 77014880 77015138 + misc_RNA NOVEL NA 259 259 1 ENSG00000234912.8 SNHG20 chr17 77086716 77094990 + processed_transcript NOVEL OTTHUMG00000132169.5 8275 3118 15 ENSG00000129657.13 SEC14L1 chr17 77086716 77217101 + protein_coding KNOWN OTTHUMG00000177311.11 130386 10850 204 ENSG00000275143.1 SCARNA16 chr17 77089307 77089493 + scaRNA KNOWN NA 187 187 1 ENSG00000281678.1 MIR6516 chr17 77089417 77089497 + miRNA KNOWN NA 81 81 1 ENSG00000222808.1 RNU4-47P chr17 77152561 77152674 - snRNA KNOWN NA 114 114 1 ENSG00000270094.1 RP11-245P10.8 chr1 228394290 228396967 + antisense NOVEL OTTHUMG00000183904.1 2678 480 3 ENSG00000262870.1 CYCSP40 chr17 77198950 77199543 - processed_pseudogene KNOWN OTTHUMG00000177326.1 594 294 2 ENSG00000263718.2 RP11-285E9.6 chr17 77257737 77281897 - lincRNA NOVEL OTTHUMG00000177704.1 24161 1348 7 ENSG00000265121.1 RP11-285E9.5 chr17 77264180 77264776 - lincRNA NOVEL OTTHUMG00000177705.1 597 597 1 ENSG00000184640.16 SEPT9 chr17 77280569 77500596 + protein_coding KNOWN OTTHUMG00000177327.15 220028 12844 279 ENSG00000266998.1 RP11-936I5.1 chr17 77373818 77377236 - antisense NOVEL OTTHUMG00000177710.1 3419 3419 1 ENSG00000264060.1 MIR4316 chr17 77396984 77397054 - miRNA KNOWN NA 71 71 1 ENSG00000200651.1 Y_RNA chr17 77442109 77442213 + misc_RNA NOVEL NA 105 105 1 ENSG00000279801.1 RP11-75C10.6 chr17 77444704 77447167 + TEC KNOWN OTTHUMG00000177715.1 2464 2464 1 ENSG00000267263.1 RP11-75C10.7 chr17 77469068 77471045 + sense_intronic NOVEL OTTHUMG00000177716.1 1978 768 2 ENSG00000267016.1 RP11-75C10.9 chr17 77469162 77472770 - antisense NOVEL OTTHUMG00000177720.2 3609 1132 3 ENSG00000278067.1 MIR6742 chr1 228397048 228397109 - miRNA KNOWN NA 62 62 1 ENSG00000267665.1 RP11-13K12.2 chr17 77526998 77536592 + lincRNA NOVEL OTTHUMG00000177427.3 9595 4613 13 ENSG00000267506.4 RP11-13K12.1 chr17 77546940 77563243 + lincRNA NOVEL OTTHUMG00000176089.5 16304 5079 7 ENSG00000267466.1 RP11-13K12.5 chr17 77563368 77568695 - lincRNA NOVEL OTTHUMG00000177431.3 5328 1767 2 ENSG00000279572.1 RP11-13K12.6 chr17 77571418 77572516 + TEC KNOWN OTTHUMG00000177782.1 1099 1099 1 ENSG00000267790.1 RP11-316M20.1 chr17 77722872 77728559 - lincRNA NOVEL OTTHUMG00000177432.1 5688 2281 2 ENSG00000278938.1 AC104981.1 chr17 77777090 77777464 - protein_coding KNOWN NA 375 375 1 ENSG00000204283.3 FLJ45079 chr17 77879027 77884087 - lincRNA NOVEL OTTHUMG00000177433.2 5061 4678 2 ENSG00000238898.1 RNU1-80P chr17 77920098 77920258 + snRNA KNOWN NA 161 161 1 ENSG00000078687.15 TNRC6C chr17 78004168 78108835 + protein_coding KNOWN OTTHUMG00000132642.8 104668 11058 107 ENSG00000279600.1 RP11-637C24.5 chr17 78008421 78008855 + TEC KNOWN OTTHUMG00000177759.1 435 435 1 ENSG00000231563.1 RP11-245P10.4 chr1 228407381 228409694 + antisense NOVEL OTTHUMG00000039975.1 2314 283 3 ENSG00000267463.1 UBE2V2P2 chr17 78066258 78066761 - processed_pseudogene KNOWN OTTHUMG00000177677.1 504 504 1 ENSG00000238658.1 RNU6-625P chr17 78066947 78067053 + snRNA KNOWN NA 107 107 1 ENSG00000204282.4 TNRC6C-AS1 chr17 78107398 78111799 - processed_transcript NOVEL OTTHUMG00000177654.1 4402 4402 3 ENSG00000141524.14 TMC6 chr17 78110458 78132407 - protein_coding KNOWN OTTHUMG00000177466.5 21950 8669 184 ENSG00000167895.13 TMC8 chr17 78130770 78142968 + protein_coding KNOWN OTTHUMG00000177436.5 12199 5459 52 ENSG00000187997.10 C17orf99 chr17 78146353 78166177 + protein_coding KNOWN OTTHUMG00000153871.5 19825 2763 19 ENSG00000267679.1 EIF5AP2 chr17 78157403 78159135 + processed_pseudogene KNOWN OTTHUMG00000177447.1 1733 1047 3 ENSG00000108639.6 SYNGR2 chr17 78168558 78173527 + protein_coding KNOWN OTTHUMG00000177457.4 4970 4074 28 ENSG00000167900.10 TK1 chr17 78174075 78187233 - protein_coding KNOWN OTTHUMG00000150674.4 13159 1861 38 ENSG00000183077.14 AFMID chr17 78187317 78207701 + protein_coding KNOWN OTTHUMG00000153957.3 20385 4048 82 ENSG00000162931.10 TRIM17 chr1 228407940 228416861 - protein_coding KNOWN OTTHUMG00000039974.3 8922 3548 39 ENSG00000267624.1 RP11-219G17.6 chr17 78211618 78211908 - processed_pseudogene KNOWN OTTHUMG00000177655.1 291 291 1 ENSG00000089685.13 BIRC5 chr17 78214186 78225636 + protein_coding KNOWN OTTHUMG00000177505.7 11451 3815 43 ENSG00000204278.11 TMEM235 chr17 78231310 78240987 + protein_coding KNOWN OTTHUMG00000170345.1 9678 2602 30 ENSG00000267676.1 THA1P chr17 78248493 78254416 - unitary_pseudogene KNOWN OTTHUMG00000132125.1 5924 1145 7 ENSG00000279886.1 RP11-219G17.8 chr17 78250346 78250932 - TEC KNOWN OTTHUMG00000177760.1 587 587 1 ENSG00000204277.1 RP11-219G17.4 chr17 78261349 78278492 - lincRNA NOVEL OTTHUMG00000177511.1 17144 2934 7 ENSG00000267737.1 AC061992.2 chr17 78315729 78347798 + lincRNA NOVEL OTTHUMG00000132645.2 32070 1145 5 ENSG00000184557.4 SOCS3 chr17 78356778 78360077 - protein_coding KNOWN OTTHUMG00000177513.3 3300 2734 4 ENSG00000266970.1 RP11-806H10.4 chr17 78360453 78373911 + lincRNA NOVEL OTTHUMG00000177663.1 13459 1188 7 ENSG00000243870.3 RN7SL236P chr17 78370852 78371135 - misc_RNA KNOWN NA 284 284 1 ENSG00000168148.3 HIST3H3 chr1 228424845 228425325 - protein_coding KNOWN OTTHUMG00000040044.2 481 481 1 ENSG00000087157.17 PGS1 chr17 78378640 78425114 + protein_coding KNOWN OTTHUMG00000177514.6 46475 4965 90 ENSG00000281727.1 AC061992.1 chr17 78398304 78398403 + miRNA NOVEL NA 100 100 1 ENSG00000200063.1 SNORA30 chr17 78399935 78400063 + snoRNA NOVEL NA 129 129 1 ENSG00000187775.15 DNAH17 chr17 78423697 78577394 - protein_coding KNOWN OTTHUMG00000150216.7 153698 16108 270 ENSG00000267432.4 RP11-559N14.5 chr17 78484882 78503056 + processed_transcript NOVEL OTTHUMG00000177638.3 18175 5498 11 ENSG00000267770.1 RP11-559N14.6 chr17 78522247 78522828 + processed_pseudogene KNOWN OTTHUMG00000177746.1 582 582 1 ENSG00000243426.3 RN7SL454P chr17 78532813 78533055 - misc_RNA KNOWN NA 243 243 1 ENSG00000267123.4 CTD-2357A8.3 chr17 78617389 78632057 - lincRNA NOVEL OTTHUMG00000177747.1 14669 1271 13 ENSG00000108669.15 CYTH1 chr17 78674048 78782297 - protein_coding KNOWN OTTHUMG00000150253.5 108250 7754 126 ENSG00000279570.1 CTD-2357A8.2 chr17 78691266 78691979 - TEC KNOWN OTTHUMG00000177595.1 714 714 1 ENSG00000230841.2 RP5-915N17.3 chr1 228449163 228449621 - processed_pseudogene KNOWN OTTHUMG00000040047.2 459 459 1 ENSG00000252391.1 RNU6-638P chr17 78696694 78696797 - snRNA KNOWN NA 104 104 1 ENSG00000055483.18 USP36 chr17 78787381 78841441 - protein_coding KNOWN OTTHUMG00000177542.8 54061 9235 174 ENSG00000267355.2 RPL9P29 chr17 78845953 78846868 - processed_pseudogene KNOWN OTTHUMG00000157951.3 916 593 2 ENSG00000035862.11 TIMP2 chr17 78852977 78925387 - protein_coding KNOWN OTTHUMG00000154517.4 72411 5633 23 ENSG00000267601.1 RP11-323N12.5 chr17 78855478 78855844 + antisense NOVEL OTTHUMG00000177627.1 367 367 1 ENSG00000178404.8 KIAA1731NL chr17 78870910 78903217 - protein_coding NOVEL OTTHUMG00000177628.2 32308 2758 17 ENSG00000279339.1 CTD-2373H9.3 chr17 78897264 78900152 + TEC KNOWN OTTHUMG00000177583.1 2889 2889 1 ENSG00000267491.1 CTD-2373H9.5 chr17 78903263 78905024 + antisense NOVEL OTTHUMG00000177630.1 1762 945 2 ENSG00000108679.11 LGALS3BP chr17 78971238 78980109 - protein_coding KNOWN OTTHUMG00000177572.6 8872 3584 87 ENSG00000171302.15 CANT1 chr17 78991717 79009867 - protein_coding KNOWN OTTHUMG00000177570.6 18151 4421 64 ENSG00000181218.5 HIST3H2A chr1 228456979 228457873 - protein_coding KNOWN OTTHUMG00000040046.1 895 895 1 ENSG00000265096.1 C1QTNF1-AS1 chr17 79019209 79027655 - antisense KNOWN OTTHUMG00000132159.2 8447 966 6 ENSG00000173918.13 C1QTNF1 chr17 79022814 79049788 + protein_coding KNOWN OTTHUMG00000177533.6 26975 4854 44 ENSG00000167280.15 ENGASE chr17 79074939 79088599 + protein_coding KNOWN OTTHUMG00000167714.3 13661 6173 55 ENSG00000167281.17 RBFOX3 chr17 79089345 79516148 - protein_coding KNOWN OTTHUMG00000150183.6 426804 9873 85 ENSG00000266711.1 RP11-398J5.1 chr17 79132722 79136402 + antisense NOVEL OTTHUMG00000177567.1 3681 547 3 ENSG00000278460.1 AC020689.1 chr17 79401970 79402032 - miRNA NOVEL NA 63 63 1 ENSG00000263278.2 CH17-351M24.1 chr17 79598032 79603921 - sense_intronic NOVEL OTTHUMG00000182019.1 5890 4204 3 ENSG00000266665.1 MIR4739 chr17 79707176 79707249 - miRNA KNOWN NA 74 74 1 ENSG00000267719.1 HP09025 chr17 79707266 79712317 + lincRNA NOVEL OTTHUMG00000177461.2 5052 4237 2 ENSG00000182156.8 ENPP7 chr17 79730919 79742222 + protein_coding KNOWN OTTHUMG00000177462.2 11304 3549 9 ENSG00000281451.1 AL139288.1 chr1 228457435 228457572 + miRNA NOVEL NA 138 138 1 ENSG00000173894.9 CBX2 chr17 79778132 79787983 + protein_coding KNOWN OTTHUMG00000177463.1 9852 5687 12 ENSG00000141570.9 CBX8 chr17 79792132 79801683 - protein_coding KNOWN OTTHUMG00000150416.2 9552 4164 19 ENSG00000262768.2 RP11-353N14.1 chr17 79800598 79802529 + antisense NOVEL OTTHUMG00000177464.2 1932 607 2 ENSG00000262772.1 RP11-353N14.2 chr17 79823452 79827704 + lincRNA NOVEL OTTHUMG00000177465.1 4253 1788 3 ENSG00000141582.13 CBX4 chr17 79833156 79839429 - protein_coding KNOWN OTTHUMG00000150415.2 6274 2880 16 ENSG00000262343.1 RP11-353N14.3 chr17 79848058 79850110 - lincRNA NOVEL OTTHUMG00000177486.1 2053 324 2 ENSG00000262585.1 RP11-353N14.5 chr17 79915252 79926725 - lincRNA NOVEL OTTHUMG00000177487.1 11474 5271 6 ENSG00000262188.1 RP11-353N14.4 chr17 79919357 79925462 + lincRNA NOVEL OTTHUMG00000177488.1 6106 1877 4 ENSG00000167291.14 TBC1D16 chr17 79932343 80035848 - protein_coding KNOWN OTTHUMG00000177489.3 103506 11555 63 ENSG00000275516.1 RP11-353N14.7 chr17 79952663 79952992 + antisense NOVEL OTTHUMG00000186713.1 330 330 1 ENSG00000196890.4 HIST3H2BB chr1 228458107 228460470 + protein_coding KNOWN OTTHUMG00000040045.1 2364 2364 1 ENSG00000262172.1 CTD-2529O21.1 chr17 79991944 79992841 - sense_intronic NOVEL OTTHUMG00000177535.1 898 443 2 ENSG00000261978.1 CTD-2529O21.2 chr17 80023894 80026107 + antisense NOVEL OTTHUMG00000177536.1 2214 418 4 ENSG00000141519.13 CCDC40 chr17 80036632 80100613 + protein_coding KNOWN OTTHUMG00000132707.3 63982 9961 114 ENSG00000171298.11 GAA chr17 80101556 80119879 + protein_coding KNOWN OTTHUMG00000177537.1 18324 5156 68 ENSG00000141543.8 EIF4A3 chr17 80135214 80147183 - protein_coding KNOWN OTTHUMG00000177538.2 11970 4967 31 ENSG00000279259.1 RP11-334C17.3 chr17 80147250 80148596 + TEC KNOWN OTTHUMG00000177539.2 1347 1347 1 ENSG00000275479.1 RP11-334C17.6 chr17 80149627 80149798 + lincRNA NOVEL OTTHUMG00000186714.1 172 172 1 ENSG00000141527.15 CARD14 chr17 80169992 80209331 + protein_coding KNOWN OTTHUMG00000177549.4 39340 8208 136 ENSG00000262580.4 RP11-334C17.5 chr17 80200673 80205949 - antisense NOVEL OTTHUMG00000177568.3 5277 5122 18 ENSG00000181523.11 SGSH chr17 80206716 80220923 - protein_coding KNOWN OTTHUMG00000177569.2 14208 6713 79 ENSG00000233485.1 RP3-467K16.2 chr1 15326680 15343876 - antisense NOVEL OTTHUMG00000002089.1 17197 3105 2 ENSG00000266174.1 MIR4666A chr1 228462074 228462152 + miRNA KNOWN NA 79 79 1 ENSG00000181045.13 SLC26A11 chr17 80219699 80253500 + protein_coding KNOWN OTTHUMG00000133419.4 33802 4903 123 ENSG00000173821.18 RNF213 chr17 80260866 80398786 + protein_coding KNOWN OTTHUMG00000161415.8 137921 28570 266 ENSG00000262979.1 CTD-2047H16.2 chr17 80315651 80316633 + sense_intronic NOVEL OTTHUMG00000177579.1 983 653 2 ENSG00000276863.1 CTD-2047H16.5 chr17 80333841 80334366 - antisense NOVEL OTTHUMG00000186715.1 526 526 1 ENSG00000280248.1 CTD-2047H16.3 chr17 80339898 80342058 + TEC KNOWN OTTHUMG00000177591.1 2161 2161 1 ENSG00000263069.4 CTD-2047H16.4 chr17 80351828 80415168 - antisense NOVEL OTTHUMG00000177592.1 63341 3983 7 ENSG00000173818.15 ENDOV chr17 80415165 80438086 + protein_coding KNOWN OTTHUMG00000164638.9 22922 7253 162 ENSG00000264961.1 MIR4730 chr17 80419418 80419493 + miRNA KNOWN NA 76 76 1 ENSG00000260369.2 CTD-2526A2.2 chr17 80453735 80454729 - lincRNA NOVEL OTTHUMG00000176094.2 995 995 1 ENSG00000279273.1 CTD-2526A2.4 chr17 80463451 80465593 - TEC KNOWN OTTHUMG00000177606.1 2143 2143 1 ENSG00000181201.3 HIST3H2BA chr1 228464103 228464626 - unitary_pseudogene KNOWN OTTHUMG00000040095.1 524 524 1 ENSG00000171246.5 NPTX1 chr17 80467148 80477843 - protein_coding KNOWN OTTHUMG00000177607.1 10696 6703 15 ENSG00000262000.1 CTD-2526A2.5 chr17 80515215 80515389 + processed_pseudogene KNOWN OTTHUMG00000177621.1 175 175 1 ENSG00000271340.1 CTD-2526A2.6 chr17 80515657 80515812 + processed_pseudogene KNOWN OTTHUMG00000184847.1 156 156 1 ENSG00000213128.3 RPL32P31 chr17 80542203 80542605 + processed_pseudogene KNOWN OTTHUMG00000157959.1 403 403 1 ENSG00000141564.12 RPTOR chr17 80544819 80966371 + protein_coding KNOWN OTTHUMG00000177622.2 421553 9389 152 ENSG00000232083.3 RPL31P7 chr17 80602549 80602926 - processed_pseudogene KNOWN OTTHUMG00000132151.1 378 378 1 ENSG00000262833.1 RP11-28G8.1 chr17 80801640 80805632 - antisense NOVEL OTTHUMG00000177623.1 3993 3204 4 ENSG00000262313.1 CTD-2561B21.4 chr17 80940418 80942033 - antisense NOVEL OTTHUMG00000177643.1 1616 494 3 ENSG00000262662.1 CTD-2561B21.3 chr17 80960766 80961713 - antisense NOVEL OTTHUMG00000177624.1 948 549 2 ENSG00000261924.1 CTD-2561B21.5 chr17 80966239 80971213 - antisense NOVEL OTTHUMG00000177644.1 4975 4207 4 ENSG00000279306.1 RP5-915N17.11 chr1 228486188 228487120 - TEC KNOWN OTTHUMG00000170550.1 933 933 1 ENSG00000240270.1 RPL12P37 chr17 80976454 80976948 + processed_pseudogene KNOWN OTTHUMG00000157963.1 495 495 1 ENSG00000176108.8 CHMP6 chr17 80991598 81009517 + protein_coding KNOWN OTTHUMG00000177645.2 17920 2118 29 ENSG00000263218.2 CTD-2561B21.7 chr17 80999509 81000130 - antisense NOVEL OTTHUMG00000177658.2 622 455 4 ENSG00000280351.2 CTD-2561B21.8 chr17 81003335 81005132 + TEC KNOWN OTTHUMG00000177659.1 1798 1798 1 ENSG00000262873.1 CTD-2561B21.11 chr17 81017969 81020011 - lincRNA NOVEL OTTHUMG00000177695.1 2043 935 5 ENSG00000262098.1 CTD-2561B21.10 chr17 81023545 81025503 - lincRNA NOVEL OTTHUMG00000177696.1 1959 368 2 ENSG00000226137.5 BAIAP2-AS1 chr17 81029130 81034881 - lincRNA KNOWN OTTHUMG00000177697.3 5752 4773 4 ENSG00000175866.14 BAIAP2 chr17 81035122 81117432 + protein_coding KNOWN OTTHUMG00000177698.3 82311 10288 237 ENSG00000181409.10 AATK chr17 81117295 81166077 - protein_coding KNOWN OTTHUMG00000132717.2 48783 6225 73 ENSG00000207736.1 MIR657 chr17 81125276 81125373 - miRNA KNOWN NA 98 98 1 ENSG00000168159.10 RNF187 chr1 228487061 228495766 + protein_coding KNOWN OTTHUMG00000040043.5 8706 3285 8 ENSG00000211563.3 AC115099.1 chr17 81125870 81125978 - miRNA NOVEL NA 109 109 1 ENSG00000221025.1 MIR1250 chr17 81133196 81133308 - miRNA KNOWN NA 113 113 1 ENSG00000263167.1 RP11-149I9.2 chr17 81135771 81136256 + antisense NOVEL OTTHUMG00000177817.1 486 362 2 ENSG00000225180.5 AATK-AS1 chr17 81165507 81183164 + antisense KNOWN OTTHUMG00000150182.2 17658 1803 10 ENSG00000141577.12 CEP131 chr17 81189593 81222999 - protein_coding KNOWN OTTHUMG00000132728.3 33407 3966 133 ENSG00000262115.1 RP11-455O6.2 chr17 81197393 81200288 + antisense NOVEL OTTHUMG00000177843.1 2896 805 2 ENSG00000167302.8 ENTHD2 chr17 81228277 81239091 - protein_coding KNOWN OTTHUMG00000177866.1 10815 4762 64 ENSG00000260005.5 AC027601.1 chr17 81228707 81233983 + antisense NOVEL OTTHUMG00000132137.2 5277 4506 8 ENSG00000224877.3 C17orf89 chr17 81239239 81241281 + protein_coding KNOWN OTTHUMG00000177867.4 2043 1376 15 ENSG00000157637.11 SLC38A10 chr17 81245000 81295547 - protein_coding KNOWN OTTHUMG00000168049.2 50548 7716 73 ENSG00000215811.5 BTNL10 chr1 228508655 228512305 - unprocessed_pseudogene KNOWN OTTHUMG00000153446.2 3651 869 4 ENSG00000276101.1 RP11-455O6.8 chr17 81251194 81251803 + antisense NOVEL OTTHUMG00000186719.1 610 610 1 ENSG00000279187.1 RP11-455O6.5 chr17 81262920 81265401 + TEC KNOWN OTTHUMG00000177903.1 2482 2482 1 ENSG00000185168.5 LINC00482 chr17 81303771 81309248 - lincRNA KNOWN OTTHUMG00000177904.1 5478 2197 7 ENSG00000185332.5 TMEM105 chr17 81311270 81330674 - protein_coding KNOWN OTTHUMG00000177905.2 19405 3794 12 ENSG00000275542.1 RP11-455O6.9 chr17 81339183 81339691 - lincRNA NOVEL OTTHUMG00000186720.1 509 509 1 ENSG00000275966.1 RP11-1055B8.9 chr17 81345476 81345966 - lincRNA NOVEL OTTHUMG00000186721.1 491 491 1 ENSG00000263154.1 RP11-1055B8.2 chr17 81362272 81374214 + lincRNA NOVEL OTTHUMG00000177949.1 11943 665 3 ENSG00000262223.5 RP11-1055B8.3 chr17 81376001 81385360 - lincRNA NOVEL OTTHUMG00000177950.1 9360 1078 22 ENSG00000274833.1 RP11-1055B8.10 chr17 81387415 81387766 + lincRNA NOVEL OTTHUMG00000186759.1 352 352 1 ENSG00000262877.4 RP11-1055B8.4 chr17 81388126 81390256 - lincRNA NOVEL OTTHUMG00000177951.4 2131 1565 4 ENSG00000202056.1 RNA5SP19 chr1 228555793 228555901 + rRNA KNOWN NA 109 109 1 ENSG00000266074.7 BAHCC1 chr17 81395475 81466332 + protein_coding KNOWN OTTHUMG00000184171.3 70858 13473 70 ENSG00000279692.1 RP11-1055B8.1 chr17 81395609 81397144 - TEC KNOWN OTTHUMG00000176097.1 1536 1536 1 ENSG00000266392.1 MIR4740 chr17 81400716 81400778 - miRNA KNOWN NA 63 63 1 ENSG00000266189.1 MIR3186 chr17 81451104 81451188 - miRNA KNOWN NA 85 85 1 ENSG00000263271.1 RP11-1055B8.8 chr17 81461013 81461937 - antisense NOVEL OTTHUMG00000177954.1 925 424 2 ENSG00000278200.1 RP13-766D20.4 chr17 81480523 81481570 - lincRNA NOVEL OTTHUMG00000186760.1 1048 1048 1 ENSG00000184009.8 ACTG1 chr17 81509971 81523847 - protein_coding KNOWN OTTHUMG00000177955.5 13877 2976 81 ENSG00000266077.1 AC139149.1 chr17 81511026 81511109 - miRNA NOVEL NA 84 84 1 ENSG00000229947.1 RP13-766D20.1 chr17 81513063 81513184 + unitary_pseudogene KNOWN OTTHUMG00000156169.1 122 122 1 ENSG00000229848.1 RP13-766D20.2 chr17 81514047 81527776 + antisense NOVEL OTTHUMG00000156171.1 13730 957 4 ENSG00000251823.2 RNA5SP162 chr1 228558296 228558339 - rRNA KNOWN NA 44 44 1 ENSG00000186765.10 FSCN2 chr17 81528396 81537130 + protein_coding KNOWN OTTHUMG00000167477.1 8735 2019 12 ENSG00000185504.15 C17orf70 chr17 81539885 81553961 - protein_coding KNOWN OTTHUMG00000167764.2 14077 5354 35 ENSG00000182446.12 NPLOC4 chr17 81556887 81648465 - protein_coding KNOWN OTTHUMG00000177990.4 91579 9574 122 ENSG00000207021.1 Y_RNA chr17 81573490 81573602 + misc_RNA NOVEL NA 113 113 1 ENSG00000182612.9 TSPAN10 chr17 81637171 81648749 + protein_coding KNOWN OTTHUMG00000178037.3 11579 4745 15 ENSG00000185527.10 PDE6G chr17 81650459 81663112 - protein_coding KNOWN OTTHUMG00000178038.2 12654 1583 22 ENSG00000204237.4 OXLD1 chr17 81665036 81666635 - protein_coding KNOWN OTTHUMG00000178063.2 1600 1600 13 ENSG00000185298.11 CCDC137 chr17 81666364 81673904 + protein_coding KNOWN OTTHUMG00000178064.1 7541 2762 30 ENSG00000263853.1 AC139530.1 chr17 81676001 81676086 + miRNA NOVEL NA 86 86 1 ENSG00000214087.7 ARL16 chr17 81681174 81683924 - protein_coding KNOWN OTTHUMG00000178103.4 2751 2597 58 ENSG00000199352.1 RNA5S1 chr1 228610268 228610386 - rRNA KNOWN NA 119 119 1 ENSG00000185359.11 HGS chr17 81683326 81703138 + protein_coding KNOWN OTTHUMG00000178109.3 19813 8254 94 ENSG00000277784.1 MIR6786 chr17 81693757 81693869 + miRNA KNOWN NA 113 113 1 ENSG00000275902.1 RP13-1032I1.11 chr17 81697025 81697714 - antisense NOVEL OTTHUMG00000186761.1 690 690 1 ENSG00000262049.1 RP13-1032I1.7 chr17 81701324 81703300 - antisense NOVEL OTTHUMG00000178170.1 1977 1977 1 ENSG00000262814.5 MRPL12 chr17 81703357 81707526 + protein_coding KNOWN OTTHUMG00000178171.1 4170 1028 12 ENSG00000262660.1 SLC25A10 chr17 81703371 81720539 + protein_coding NOVEL OTTHUMG00000178172.1 17169 1922 15 ENSG00000183048.10 SLC25A10 chr17 81712236 81721016 + protein_coding KNOWN OTTHUMG00000178173.1 8781 2621 70 ENSG00000281517.1 Metazoa_SRP chr17 81718849 81719095 - misc_RNA NOVEL NA 247 247 1 ENSG00000215644.8 GCGR chr17 81804132 81814013 + protein_coding KNOWN OTTHUMG00000177914.1 9882 3241 38 ENSG00000225663.6 FAM195B chr17 81822361 81833302 - protein_coding KNOWN OTTHUMG00000177915.1 10942 3726 57 ENSG00000201588.1 RNA5S2 chr1 228612509 228612627 - rRNA KNOWN NA 119 119 1 ENSG00000182676.4 PPP1R27 chr17 81833492 81835050 - protein_coding KNOWN OTTHUMG00000177916.1 1559 1449 7 ENSG00000185624.13 P4HB chr17 81843159 81860694 - protein_coding KNOWN OTTHUMG00000150269.6 17536 5303 118 ENSG00000262831.1 RP11-498C9.2 chr17 81843165 81843958 + antisense NOVEL OTTHUMG00000177880.1 794 529 2 ENSG00000278876.1 RP11-498C9.4 chr17 81862778 81863102 + TEC KNOWN OTTHUMG00000177917.1 325 325 1 ENSG00000262413.1 RP11-498C9.3 chr17 81867721 81868552 + antisense NOVEL OTTHUMG00000177881.1 832 762 4 ENSG00000141522.10 ARHGDIA chr17 81867721 81871406 - protein_coding KNOWN OTTHUMG00000178352.2 3686 2903 77 ENSG00000263731.1 RP11-498C9.15 chr17 81878425 81881106 - lincRNA NOVEL OTTHUMG00000178529.1 2682 2682 1 ENSG00000263859.1 RP11-498C9.16 chr17 81878667 81879557 + lincRNA NOVEL OTTHUMG00000178530.1 891 782 2 ENSG00000183684.7 ALYREF chr17 81887844 81891586 - protein_coding KNOWN OTTHUMG00000160470.2 3743 1574 16 ENSG00000141552.16 ANAPC11 chr17 81890790 81900991 + protein_coding KNOWN OTTHUMG00000177982.4 10202 4027 80 ENSG00000199337.1 RNA5S3 chr1 228614750 228614868 - rRNA KNOWN NA 119 119 1 ENSG00000183979.7 NPB chr17 81900745 81902905 + protein_coding KNOWN OTTHUMG00000177983.2 2161 2161 3 ENSG00000185813.9 PCYT2 chr17 81900965 81911464 - protein_coding KNOWN OTTHUMG00000177956.2 10500 6897 151 ENSG00000187531.12 SIRT7 chr17 81911939 81921323 - protein_coding KNOWN OTTHUMG00000177957.2 9385 6152 103 ENSG00000197063.9 MAFG chr17 81918270 81927714 - protein_coding KNOWN OTTHUMG00000177958.1 9445 5220 10 ENSG00000264769.1 RP11-498C9.12 chr17 81922899 81924511 + antisense NOVEL OTTHUMG00000178434.1 1613 563 3 ENSG00000265688.1 MAFG-AS1 chr17 81927829 81930753 + antisense KNOWN OTTHUMG00000178435.1 2925 1895 5 ENSG00000183010.15 PYCR1 chr17 81932384 81942412 - protein_coding KNOWN OTTHUMG00000178436.1 10029 2886 104 ENSG00000263585.1 RP11-498C9.13 chr17 81932398 81933058 + antisense NOVEL OTTHUMG00000178437.1 661 450 2 ENSG00000185105.4 MYADML2 chr17 81939645 81947233 - protein_coding KNOWN OTTHUMG00000154388.2 7589 2458 5 ENSG00000235296.1 AC137723.5 chr17 81941869 81947601 + antisense NOVEL OTTHUMG00000154387.1 5733 691 2 ENSG00000236045.1 RP3-467K16.7 chr1 15334166 15335464 - antisense NOVEL OTTHUMG00000035304.1 1299 727 2 ENSG00000200381.1 RNA5S4 chr1 228616991 228617109 - rRNA KNOWN NA 119 119 1 ENSG00000185269.10 NOTUM chr17 81952507 81961840 - protein_coding KNOWN OTTHUMG00000154416.6 9334 3019 30 ENSG00000264735.1 RP11-498C9.17 chr17 81965632 81966589 - lincRNA NOVEL OTTHUMG00000178531.1 958 958 1 ENSG00000169696.14 ASPSCR1 chr17 81976807 82017406 + protein_coding KNOWN OTTHUMG00000178438.3 40600 12097 173 ENSG00000169689.13 STRA13 chr17 82018702 82024107 - protein_coding KNOWN OTTHUMG00000132129.2 5406 1531 48 ENSG00000169683.6 LRRC45 chr17 82023302 82031151 + protein_coding KNOWN OTTHUMG00000178454.1 7850 3606 46 ENSG00000275682.1 AC137723.1 chr17 82024633 82024692 + miRNA NOVEL NA 60 60 1 ENSG00000169750.7 RAC3 chr17 82031624 82034204 + protein_coding KNOWN OTTHUMG00000178455.1 2581 1527 19 ENSG00000169738.6 DCXR chr17 82035136 82037732 - protein_coding KNOWN OTTHUMG00000178483.3 2597 1902 112 ENSG00000279372.1 RP11-1182P23.5 chr17 82035403 82035800 - TEC KNOWN OTTHUMG00000178500.1 398 398 1 ENSG00000264569.1 RP13-650J16.1 chr17 82037905 82039380 + antisense NOVEL OTTHUMG00000178439.1 1476 709 4 ENSG00000199396.1 RNA5S5 chr1 228619232 228619350 - rRNA KNOWN NA 119 119 1 ENSG00000169733.10 RFNG chr17 82047902 82051831 - protein_coding KNOWN OTTHUMG00000178512.1 3930 3865 55 ENSG00000169727.11 GPS1 chr17 82050691 82057470 + protein_coding KNOWN OTTHUMG00000178484.2 6780 6155 193 ENSG00000169718.16 DUS1L chr17 82057506 82065887 - protein_coding KNOWN OTTHUMG00000178525.2 8382 5999 103 ENSG00000169710.6 FASN chr17 82078338 82098332 - protein_coding KNOWN OTTHUMG00000178527.1 19995 8979 63 ENSG00000176155.17 CCDC57 chr17 82101460 82212830 - protein_coding KNOWN OTTHUMG00000140396.8 111371 12397 107 ENSG00000265678.1 RP11-1376P16.2 chr17 82153430 82154815 + antisense NOVEL OTTHUMG00000178560.1 1386 555 2 ENSG00000266654.1 RP11-1376P16.1 chr17 82160056 82160452 + antisense NOVEL OTTHUMG00000178561.1 397 345 2 ENSG00000264548.1 RP13-516M14.2 chr17 82214227 82217352 + antisense NOVEL OTTHUMG00000178600.1 3126 2368 2 ENSG00000141526.13 SLC16A3 chr17 82228397 82261129 + protein_coding KNOWN OTTHUMG00000178832.1 32733 8995 80 ENSG00000275505.1 MIR6787 chr17 82236668 82236728 + miRNA KNOWN NA 61 61 1 ENSG00000200624.1 RNA5S6 chr1 228621447 228621565 - rRNA KNOWN NA 119 119 1 ENSG00000141551.13 CSNK1D chr17 82239023 82273731 - protein_coding KNOWN OTTHUMG00000178601.1 34709 11024 131 ENSG00000275888.1 RP13-516M14.10 chr17 82244770 82245591 + antisense NOVEL OTTHUMG00000188129.1 822 629 2 ENSG00000280407.2 RP13-516M14.8 chr17 82249067 82251844 + TEC KNOWN OTTHUMG00000178833.1 2778 2778 3 ENSG00000265692.1 RP13-516M14.4 chr17 82290046 82292814 - lincRNA NOVEL OTTHUMG00000178661.1 2769 1810 2 ENSG00000260563.3 RP13-516M14.1 chr17 82293716 82294910 + lincRNA NOVEL OTTHUMG00000176101.1 1195 1195 1 ENSG00000173762.6 CD7 chr17 82314868 82317602 - protein_coding KNOWN OTTHUMG00000178662.1 2735 2735 21 ENSG00000141574.6 SECTM1 chr17 82321024 82334074 - protein_coding KNOWN OTTHUMG00000178668.1 13051 2961 35 ENSG00000182459.4 TEX19 chr17 82359247 82363776 + protein_coding KNOWN OTTHUMG00000132857.1 4530 1936 2 ENSG00000278964.1 RP13-20L14.2 chr17 82362349 82363196 - TEC KNOWN OTTHUMG00000178669.1 848 848 1 ENSG00000181408.3 UTS2R chr17 82374230 82375586 + protein_coding KNOWN OTTHUMG00000178835.1 1357 1357 1 ENSG00000202521.1 RNA5S7 chr1 228623667 228623785 - rRNA KNOWN NA 119 119 1 ENSG00000260011.2 RP13-20L14.1 chr17 82381110 82382690 - lincRNA NOVEL OTTHUMG00000176103.2 1581 360 2 ENSG00000181396.11 OGFOD3 chr17 82389223 82418637 - protein_coding KNOWN OTTHUMG00000178679.2 29415 6391 69 ENSG00000264812.1 RP13-20L14.4 chr17 82400703 82401382 - sense_intronic NOVEL OTTHUMG00000178680.2 680 680 1 ENSG00000201239.1 Y_RNA chr17 82417226 82417321 + misc_RNA NOVEL NA 96 96 1 ENSG00000169660.14 HEXDC chr17 82418318 82442645 + protein_coding KNOWN OTTHUMG00000178836.2 24328 4153 103 ENSG00000279066.1 HEXDC-IT1 chr17 82425498 82427310 + sense_intronic KNOWN OTTHUMG00000178837.1 1813 1813 1 ENSG00000178927.15 C17orf62 chr17 82442589 82450829 - protein_coding KNOWN OTTHUMG00000178770.2 8241 7234 207 ENSG00000265458.1 RP13-20L14.6 chr17 82454273 82458521 - antisense NOVEL OTTHUMG00000178838.1 4249 456 5 ENSG00000141562.16 NARF chr17 82458180 82490537 + protein_coding KNOWN OTTHUMG00000178844.3 32358 7962 181 ENSG00000279744.1 RP13-20L14.10 chr17 82462601 82464255 + TEC KNOWN OTTHUMG00000178845.1 1655 1655 1 ENSG00000200343.1 RNA5S8 chr1 228625909 228626027 - rRNA KNOWN NA 119 119 1 ENSG00000266445.1 RP13-991F5.2 chr17 82476597 82477924 - antisense NOVEL OTTHUMG00000178839.1 1328 838 2 ENSG00000266236.1 NARF-IT1 chr17 82482098 82483388 + sense_intronic NOVEL OTTHUMG00000178846.1 1291 769 2 ENSG00000141568.18 FOXK2 chr17 82519713 82644662 + protein_coding KNOWN OTTHUMG00000140374.5 124950 9991 71 ENSG00000265136.1 RP13-638C3.6 chr17 82576616 82577391 - processed_pseudogene KNOWN OTTHUMG00000178840.1 776 456 2 ENSG00000262652.1 RP13-638C3.2 chr17 82578023 82578616 + sense_intronic NOVEL OTTHUMG00000177961.1 594 594 1 ENSG00000262147.1 RP13-638C3.3 chr17 82587313 82588411 - antisense NOVEL OTTHUMG00000177962.1 1099 318 2 ENSG00000261845.2 RP13-638C3.4 chr17 82602989 82604178 - antisense NOVEL OTTHUMG00000177963.1 1190 1190 1 ENSG00000141580.14 WDR45B chr17 82614562 82648553 - protein_coding KNOWN OTTHUMG00000150146.3 33992 3542 68 ENSG00000279613.1 RP13-638C3.5 chr17 82648849 82650657 + TEC KNOWN OTTHUMG00000177964.1 1809 1809 1 ENSG00000141542.9 RAB40B chr17 82654973 82698728 - protein_coding KNOWN OTTHUMG00000177806.1 43756 6194 41 ENSG00000201321.1 RNA5S9 chr1 228628148 228628266 - rRNA KNOWN NA 119 119 1 ENSG00000266107.1 MIR4525 chr17 82668233 82668307 - miRNA KNOWN NA 75 75 1 ENSG00000263063.1 RP11-388C12.1 chr17 82713908 82716255 - lincRNA NOVEL OTTHUMG00000177809.1 2348 898 2 ENSG00000141560.13 FN3KRP chr17 82716683 82730328 + protein_coding KNOWN OTTHUMG00000177846.3 13646 2971 46 ENSG00000280575.1 AC024361.1 chr17 82718516 82718640 - protein_coding NOVEL NA 125 54 2 ENSG00000263321.1 RP11-388C12.5 chr17 82729164 82734143 - lincRNA NOVEL OTTHUMG00000177810.1 4980 333 2 ENSG00000167363.12 FN3K chr17 82735575 82751197 + protein_coding KNOWN OTTHUMG00000177847.1 15623 3872 20 ENSG00000262410.1 RP11-388C12.8 chr17 82745068 82745709 + sense_intronic NOVEL OTTHUMG00000177848.1 642 642 1 ENSG00000141556.19 TBCD chr17 82752064 82945922 + protein_coding KNOWN OTTHUMG00000177878.3 193859 13546 276 ENSG00000264383.1 AC068014.1 chr17 82777954 82778039 - miRNA NOVEL NA 86 86 1 ENSG00000265461.1 AC068014.2 chr17 82778477 82778574 - miRNA NOVEL NA 98 98 1 ENSG00000281588.1 AL713899.1 chr1 228628176 228628234 - miRNA NOVEL NA 59 59 1 ENSG00000263098.1 RP11-567O16.1 chr17 82795486 82796095 - antisense NOVEL OTTHUMG00000177811.1 610 413 2 ENSG00000141579.6 ZNF750 chr17 82829435 82840578 - protein_coding KNOWN OTTHUMG00000177822.3 11144 3713 6 ENSG00000262663.1 RP11-497H17.1 chr17 82918282 82918785 + lincRNA NOVEL OTTHUMG00000177879.1 504 504 1 ENSG00000175711.7 B3GNTL1 chr17 82942155 83051810 - protein_coding KNOWN OTTHUMG00000177788.1 109656 6891 71 ENSG00000262339.4 RP11-1197K16.2 chr17 82978525 82981738 + antisense NOVEL OTTHUMG00000177789.1 3214 628 9 ENSG00000176845.11 METRNL chr17 83079691 83095119 + protein_coding KNOWN OTTHUMG00000177771.2 15429 2626 16 ENSG00000274370.1 AC144831.3 chr17 83098377 83098987 + lincRNA NOVEL OTTHUMG00000186762.1 611 611 1 ENSG00000261888.1 AC144831.1 chr17 83104255 83106910 + lincRNA NOVEL OTTHUMG00000177772.1 2656 2656 1 ENSG00000279143.1 AC139099.7 chr17 83132647 83136150 - TEC KNOWN OTTHUMG00000177773.2 3504 3504 1 ENSG00000262898.1 AC139099.4 chr17 83144131 83177607 + lincRNA NOVEL OTTHUMG00000177774.1 33477 641 3 ENSG00000199910.1 RNA5S10 chr1 228630390 228630508 - rRNA KNOWN NA 119 119 1 ENSG00000262952.1 AC139099.6 chr17 83211996 83221190 + lincRNA NOVEL OTTHUMG00000177775.1 9195 868 5 ENSG00000262094.1 AC139099.5 chr17 83220527 83227721 - lincRNA NOVEL OTTHUMG00000177776.1 7195 2625 7 ENSG00000232938.2 FLJ43681 chr17 83226897 83240804 + transcribed_processed_pseudogene KNOWN OTTHUMG00000177777.1 13908 2256 5 ENSG00000262352.1 AP005530.1 chr18 11103 15928 + lincRNA NOVEL OTTHUMG00000177910.1 4826 1008 5 ENSG00000263305.1 AP005530.2 chr18 14195 16898 - lincRNA NOVEL OTTHUMG00000177911.1 2704 610 4 ENSG00000262181.1 RP11-683L23.2 chr18 45004 45556 + processed_pseudogene KNOWN OTTHUMG00000177912.1 553 506 2 ENSG00000173213.8 RP11-683L23.1 chr18 47221 73545 - protein_coding NOVEL OTTHUMG00000163448.4 26325 2926 14 ENSG00000262081.2 IL9RP4 chr18 80140 88570 - unprocessed_pseudogene KNOWN OTTHUMG00000177934.2 8431 1248 8 ENSG00000274446.1 RP11-683L23.6 chr18 94202 94330 - processed_pseudogene KNOWN OTTHUMG00000187929.1 129 129 1 ENSG00000263006.5 ROCK1P1 chr18 109065 122219 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000177913.2 13155 2645 12 ENSG00000199334.1 RNA5S11 chr1 228632631 228632749 - rRNA KNOWN NA 119 119 1 ENSG00000277521.1 MIR8078 chr18 112256 112339 - miRNA KNOWN NA 84 84 1 ENSG00000101557.13 USP14 chr18 158383 214629 + protein_coding KNOWN OTTHUMG00000178040.7 56247 5987 96 ENSG00000079134.10 THOC1 chr18 214520 268050 - protein_coding KNOWN OTTHUMG00000178051.11 53531 8102 210 ENSG00000263884.1 RP11-705O1.8 chr18 268148 270278 + lincRNA NOVEL OTTHUMG00000178215.1 2131 2131 1 ENSG00000264514.1 RP11-720L2.4 chr18 316737 319165 + lincRNA NOVEL OTTHUMG00000178216.1 2429 548 2 ENSG00000158270.11 COLEC12 chr18 316740 500722 - protein_coding KNOWN OTTHUMG00000178145.2 183983 7340 21 ENSG00000265477.1 RP11-720L2.2 chr18 423744 424416 - sense_intronic NOVEL OTTHUMG00000178218.1 673 454 2 ENSG00000264265.1 RP11-14P20.1 chr18 508568 515294 - lincRNA NOVEL OTTHUMG00000178219.1 6727 500 3 ENSG00000177143.4 CETN1 chr18 580357 582114 + protein_coding KNOWN OTTHUMG00000131471.2 1758 1758 1 ENSG00000222174.1 RN7SKP146 chr18 586517 586850 - misc_RNA KNOWN NA 334 334 1 ENSG00000199270.1 RNA5S12 chr1 228634871 228634989 - rRNA KNOWN NA 119 119 1 ENSG00000079101.15 CLUL1 chr18 596988 650334 + protein_coding KNOWN OTTHUMG00000178252.6 53347 3846 82 ENSG00000239158.1 AP001178.1 chr18 603166 603258 - miRNA NOVEL NA 93 93 1 ENSG00000176912.3 TYMSOS chr18 641320 658340 - processed_transcript NOVEL OTTHUMG00000178257.2 17021 976 4 ENSG00000266456.1 RP11-806L2.2 chr18 650229 652843 + antisense NOVEL OTTHUMG00000178258.1 2615 2106 2 ENSG00000263727.1 RP11-806L2.5 chr18 653985 657259 - sense_intronic NOVEL OTTHUMG00000178259.2 3275 268 2 ENSG00000176890.14 TYMS chr18 657604 673578 + protein_coding KNOWN OTTHUMG00000131473.5 15975 2470 29 ENSG00000132199.17 ENOSF1 chr18 670324 712676 - protein_coding KNOWN OTTHUMG00000131470.9 42353 10616 187 ENSG00000265490.1 RP11-806L2.6 chr18 706523 707648 + antisense NOVEL OTTHUMG00000178280.1 1126 326 2 ENSG00000176105.12 YES1 chr18 721588 812546 - protein_coding KNOWN OTTHUMG00000131472.8 90959 5100 43 ENSG00000266171.1 RP11-769O8.1 chr18 735746 737459 + antisense NOVEL OTTHUMG00000178298.1 1714 1714 1 ENSG00000228140.1 RP3-467K16.4 chr1 15402979 15409433 - lincRNA NOVEL OTTHUMG00000002257.1 6455 5178 3 ENSG00000202526.1 RNA5S13 chr1 228637096 228637214 - rRNA KNOWN NA 119 119 1 ENSG00000264635.1 RP11-769O8.3 chr18 738058 739662 - sense_intronic NOVEL OTTHUMG00000178354.1 1605 1605 1 ENSG00000264339.1 RP11-769O8.2 chr18 738058 739444 + antisense NOVEL OTTHUMG00000178299.1 1387 464 2 ENSG00000206687.1 RNU1-109P chr18 797989 798135 - snRNA KNOWN NA 147 147 1 ENSG00000273355.1 RP11-672L10.6 chr18 813274 813756 + lincRNA NOVEL OTTHUMG00000186207.1 483 483 1 ENSG00000266575.1 BOLA2P1 chr18 832238 832469 + processed_pseudogene KNOWN OTTHUMG00000178360.1 232 232 1 ENSG00000264179.1 RP11-672L10.5 chr18 856526 857045 + processed_pseudogene KNOWN OTTHUMG00000178361.1 520 520 1 ENSG00000265671.1 RP11-672L10.3 chr18 894435 907680 - antisense NOVEL OTTHUMG00000178362.1 13246 351 2 ENSG00000265179.5 RP11-672L10.2 chr18 902766 906667 - processed_transcript NOVEL OTTHUMG00000178281.3 3902 3902 8 ENSG00000141433.11 ADCYAP1 chr18 904943 912172 + protein_coding KNOWN OTTHUMG00000131479.5 7230 3805 14 ENSG00000259837.1 RP11-672L10.1 chr18 926083 927993 - lincRNA NOVEL OTTHUMG00000176096.1 1911 861 2 ENSG00000201355.1 RNA5S14 chr1 228639337 228639455 - rRNA KNOWN NA 119 119 1 ENSG00000272461.1 RP11-689C9.1 chr18 962592 976883 - lincRNA NOVEL OTTHUMG00000185297.1 14292 657 3 ENSG00000263551.4 RP11-78F17.1 chr18 976589 1174823 + lincRNA NOVEL OTTHUMG00000178322.2 198235 1356 20 ENSG00000263505.1 RP11-78F17.3 chr18 1159198 1160404 - processed_pseudogene KNOWN OTTHUMG00000178373.1 1207 872 2 ENSG00000266251.1 COX6CP3 chr18 1176790 1177012 - processed_pseudogene KNOWN OTTHUMG00000178369.1 223 223 1 ENSG00000132204.12 LINC00470 chr18 1254383 1408344 - lincRNA KNOWN OTTHUMG00000178327.2 153962 4063 51 ENSG00000199197.1 RN7SKP72 chr18 1323794 1324085 - misc_RNA KNOWN NA 292 292 1 ENSG00000263396.1 RP11-288C17.3 chr18 1357651 1357942 + processed_pseudogene KNOWN OTTHUMG00000178370.1 292 292 1 ENSG00000265417.1 RP11-288C17.1 chr18 1362445 1363873 - processed_pseudogene KNOWN OTTHUMG00000178371.1 1429 1105 2 ENSG00000266602.1 RP11-476K15.1 chr18 1509183 1647097 + lincRNA NOVEL OTTHUMG00000178359.2 137915 826 4 ENSG00000266450.1 CTD-2015H3.2 chr18 1655177 1779955 + lincRNA NOVEL OTTHUMG00000178381.1 124779 505 3 ENSG00000201925.1 RNA5S15 chr1 228641568 228641686 - rRNA KNOWN NA 119 119 1 ENSG00000264080.1 CTD-2015H3.1 chr18 1780329 1782064 + lincRNA NOVEL OTTHUMG00000178382.1 1736 574 3 ENSG00000263745.4 RP11-161I6.2 chr18 1883524 2240847 - lincRNA NOVEL OTTHUMG00000178384.2 357324 1893 17 ENSG00000264189.1 CTD-2533G20.1 chr18 1927727 1929094 - processed_pseudogene KNOWN OTTHUMG00000178386.2 1368 997 2 ENSG00000101574.13 METTL4 chr18 2537525 2571509 - protein_coding KNOWN OTTHUMG00000131482.4 33985 5724 36 ENSG00000238575.1 snoU109 chr18 2555358 2555492 + snoRNA NOVEL NA 135 135 1 ENSG00000266783.1 RP11-715F3.2 chr18 2561172 2562220 - sense_intronic NOVEL OTTHUMG00000178364.1 1049 1049 1 ENSG00000264150.1 RP11-715F3.1 chr18 2568392 2569122 + processed_pseudogene KNOWN OTTHUMG00000178275.1 731 429 2 ENSG00000080986.11 NDC80 chr18 2571511 2616635 + protein_coding KNOWN OTTHUMG00000131483.3 45125 3600 30 ENSG00000235422.1 KATNBL1P3 chr18 2593674 2594913 - processed_pseudogene KNOWN OTTHUMG00000178276.2 1240 909 2 ENSG00000202224.1 Y_RNA chr18 2621090 2621201 + misc_RNA NOVEL NA 112 112 1 ENSG00000202257.1 RNA5S16 chr1 228643809 228643927 - rRNA KNOWN NA 119 119 1 ENSG00000200875.1 RNU6-340P chr18 2649761 2649867 - snRNA KNOWN NA 107 107 1 ENSG00000266405.3 CBX3P2 chr18 2652170 2655395 - transcribed_processed_pseudogene KNOWN OTTHUMG00000178336.1 3226 1429 3 ENSG00000101596.13 SMCHD1 chr18 2655738 2805017 + protein_coding KNOWN OTTHUMG00000178235.4 149280 12210 148 ENSG00000266049.1 RP11-703M24.5 chr18 2688564 2833065 - antisense NOVEL OTTHUMG00000178268.2 144502 1049 6 ENSG00000207034.1 Y_RNA chr18 2778941 2779057 + misc_RNA NOVEL NA 117 117 1 ENSG00000132205.9 EMILIN2 chr18 2847030 2915993 + protein_coding KNOWN OTTHUMG00000128525.2 68964 6435 17 ENSG00000101577.8 LPIN2 chr18 2916994 3013315 - protein_coding KNOWN OTTHUMG00000131508.7 96322 6800 31 ENSG00000272625.1 RP11-737O24.5 chr18 2920966 2921685 + antisense NOVEL OTTHUMG00000186209.1 720 720 1 ENSG00000263606.1 RP11-737O24.3 chr18 2945550 2946890 - transcribed_processed_pseudogene KNOWN OTTHUMG00000178277.2 1341 1341 2 ENSG00000265907.1 RP11-737O24.2 chr18 2948238 2960756 + antisense NOVEL OTTHUMG00000178207.1 12519 857 6 ENSG00000200370.1 RNA5S17 chr1 228646040 228646158 - rRNA KNOWN NA 119 119 1 ENSG00000266397.1 RP11-737O24.1 chr18 2967018 2985410 + antisense NOVEL OTTHUMG00000178208.1 18393 568 4 ENSG00000264186.1 SNRPCP4 chr18 2990652 2991078 + processed_pseudogene KNOWN OTTHUMG00000178282.1 427 427 1 ENSG00000277447.1 RP11-193E15.4 chr18 3025069 3025387 - processed_pseudogene KNOWN OTTHUMG00000187930.1 319 319 1 ENSG00000252258.1 SNORA70 chr18 3025434 3025566 - snoRNA NOVEL NA 133 133 1 ENSG00000101605.11 MYOM1 chr18 3066807 3220108 - protein_coding KNOWN OTTHUMG00000178209.6 153302 6574 128 ENSG00000252353.1 RNU7-25P chr18 3093568 3093629 + snRNA KNOWN NA 62 62 1 ENSG00000265399.1 RP13-270P17.2 chr18 3190397 3247277 + antisense NOVEL OTTHUMG00000178339.1 56881 1771 5 ENSG00000272688.1 RP13-270P17.3 chr18 3246401 3247086 - lincRNA NOVEL OTTHUMG00000186210.1 686 686 1 ENSG00000101608.11 MYL12A chr18 3247481 3256236 + protein_coding KNOWN OTTHUMG00000131509.5 8756 3245 37 ENSG00000264235.4 RP13-270P17.1 chr18 3255436 3261850 - antisense NOVEL OTTHUMG00000178273.2 6415 1063 6 ENSG00000212237.1 RNA5SP18 chr1 228647912 228648032 - rRNA KNOWN NA 121 121 1 ENSG00000118680.11 MYL12B chr18 3261909 3278284 + protein_coding KNOWN OTTHUMG00000131510.2 16376 1761 16 ENSG00000266578.1 RP11-838N2.5 chr18 3284145 3327292 + lincRNA NOVEL OTTHUMG00000178365.1 43148 864 2 ENSG00000259256.1 RP11-838N2.3 chr18 3347776 3350559 - lincRNA NOVEL OTTHUMG00000172322.1 2784 404 3 ENSG00000240364.1 RPL31P59 chr18 3377916 3378247 - processed_pseudogene KNOWN OTTHUMG00000158159.1 332 332 1 ENSG00000265243.1 IGLJCOR18 chr18 3394889 3395312 + IG_C_pseudogene KNOWN OTTHUMG00000178366.2 424 424 1 ENSG00000243720.1 RPL21P127 chr18 3406342 3406818 - processed_pseudogene KNOWN OTTHUMG00000158160.1 477 477 1 ENSG00000177426.19 TGIF1 chr18 3411608 3459978 + protein_coding KNOWN OTTHUMG00000131511.10 48371 8222 71 ENSG00000263460.1 BOD1P1 chr18 3415145 3415580 + transcribed_processed_pseudogene KNOWN OTTHUMG00000178413.1 436 436 1 ENSG00000266835.4 LINC01540 chr18 3466250 3478978 + lincRNA NOVEL OTTHUMG00000178331.2 12729 1051 13 ENSG00000170579.13 DLGAP1 chr18 3496032 4455335 - protein_coding KNOWN OTTHUMG00000131537.11 959304 12106 163 ENSG00000183929.7 DUSP5P1 chr1 228650241 228651379 + processed_pseudogene KNOWN OTTHUMG00000037916.3 1139 1139 1 ENSG00000241223.3 RN7SL39P chr18 3571215 3571511 - misc_RNA KNOWN NA 297 297 1 ENSG00000266373.1 RP11-710M11.1 chr18 3580169 3580754 + processed_pseudogene KNOWN OTTHUMG00000178383.1 586 586 1 ENSG00000177337.6 DLGAP1-AS1 chr18 3593732 3598352 + antisense NOVEL OTTHUMG00000177863.2 4621 2105 17 ENSG00000262001.1 DLGAP1-AS2 chr18 3603000 3608336 + antisense NOVEL OTTHUMG00000177864.1 5337 3171 3 ENSG00000266401.1 RP11-874J12.4 chr18 3653410 3656282 + antisense NOVEL OTTHUMG00000178410.1 2873 1455 3 ENSG00000266513.1 RP11-874J12.3 chr18 3770017 3771430 - sense_intronic NOVEL OTTHUMG00000178332.1 1414 557 2 ENSG00000263724.1 DLGAP1-AS3 chr18 3878180 3897069 + antisense NOVEL OTTHUMG00000178391.1 18890 1332 6 ENSG00000275518.1 MIR6718 chr18 3885353 3885432 + miRNA KNOWN NA 80 80 1 ENSG00000207278.1 RNU6-831P chr18 3894699 3894805 - snRNA KNOWN NA 107 107 1 ENSG00000263878.1 DLGAP1-AS4 chr18 3962353 4013943 + antisense NOVEL OTTHUMG00000178387.1 51591 757 5 ENSG00000206878.1 SNORA51 chr1 228652436 228652560 + snoRNA NOVEL NA 125 125 1 ENSG00000250933.1 GAPDHP66 chr18 3977649 3978615 - processed_pseudogene KNOWN OTTHUMG00000160055.1 967 967 1 ENSG00000261520.4 DLGAP1-AS5 chr18 4264602 4295405 + antisense NOVEL OTTHUMG00000176106.1 30804 2878 10 ENSG00000264246.1 RP11-138C24.2 chr18 4430945 4431152 + processed_pseudogene KNOWN OTTHUMG00000178414.1 208 208 1 ENSG00000265545.1 RP11-183C12.1 chr18 4459230 4459458 + processed_pseudogene KNOWN OTTHUMG00000178415.1 229 229 1 ENSG00000266268.4 RP11-172F10.1 chr18 4775054 5004537 - lincRNA NOVEL OTTHUMG00000178409.1 229484 631 10 ENSG00000222463.1 AP005138.1 chr18 4988092 4988169 - miRNA NOVEL NA 78 78 1 ENSG00000264775.1 PPIAP14 chr18 5002759 5003254 - processed_pseudogene KNOWN OTTHUMG00000178431.1 496 496 1 ENSG00000265514.1 RP11-92G19.2 chr18 5081182 5095815 + lincRNA NOVEL OTTHUMG00000178432.1 14634 815 4 ENSG00000215368.5 BOD1P2 chr18 5132749 5133229 - processed_pseudogene KNOWN OTTHUMG00000178685.1 481 481 1 ENSG00000231824.3 C18orf42 chr18 5145285 5197503 - protein_coding KNOWN OTTHUMG00000178457.1 52219 711 4 ENSG00000234975.6 FTH1P2 chr1 228687415 228687826 + processed_pseudogene KNOWN OTTHUMG00000037918.2 412 412 1 ENSG00000266153.1 RP11-190I17.2 chr18 5159332 5171026 + lincRNA NOVEL OTTHUMG00000178450.1 11695 547 3 ENSG00000265091.4 RP11-835E18.5 chr18 5232876 5238526 - lincRNA NOVEL OTTHUMG00000178981.1 5651 977 5 ENSG00000264575.1 LINC00526 chr18 5236724 5238598 - lincRNA KNOWN OTTHUMG00000178804.1 1875 1875 1 ENSG00000263753.5 LINC00667 chr18 5237826 5246508 + lincRNA NOVEL OTTHUMG00000178805.2 8683 6652 15 ENSG00000265188.1 RP11-835E18.4 chr18 5240255 5241167 - processed_pseudogene KNOWN OTTHUMG00000178806.1 913 913 1 ENSG00000198081.9 ZBTB14 chr18 5289019 5297053 - protein_coding KNOWN OTTHUMG00000131563.3 8035 4120 29 ENSG00000264254.1 CTD-3096M3.1 chr18 5310396 5317664 + lincRNA NOVEL OTTHUMG00000178807.1 7269 471 2 ENSG00000266288.1 CTD-3096M3.2 chr18 5381641 5385330 - lincRNA NOVEL OTTHUMG00000178831.1 3690 463 2 ENSG00000082397.14 EPB41L3 chr18 5392381 5630700 - protein_coding KNOWN OTTHUMG00000131562.8 238320 11007 262 ENSG00000265316.1 RP11-286N3.1 chr18 5463627 5480975 + antisense NOVEL OTTHUMG00000178868.1 17349 578 4 ENSG00000116574.5 RHOU chr1 228735077 228746669 + protein_coding KNOWN OTTHUMG00000037919.1 11593 4372 3 ENSG00000264000.1 RP11-286N3.2 chr18 5567130 5570942 + antisense NOVEL OTTHUMG00000178869.1 3813 456 3 ENSG00000252432.1 AP001032.1 chr18 5661945 5662050 - miRNA NOVEL NA 106 106 1 ENSG00000261738.5 MIR3976HG chr18 5748819 5876328 + lincRNA NOVEL OTTHUMG00000176112.3 127510 1820 12 ENSG00000272380.1 MIR3976 chr18 5840695 5840833 + miRNA KNOWN NA 139 139 1 ENSG00000206432.4 TMEM200C chr18 5882072 5895955 - protein_coding KNOWN OTTHUMG00000178423.4 13884 10638 4 ENSG00000264449.4 RP11-945C19.4 chr18 5887487 5909122 + antisense NOVEL OTTHUMG00000178433.2 21636 847 8 ENSG00000154655.13 L3MBTL4 chr18 5954706 6415237 - protein_coding KNOWN OTTHUMG00000178980.1 460532 7959 102 ENSG00000265487.1 RP11-793A3.1 chr18 5956101 5960785 + antisense NOVEL OTTHUMG00000178850.1 4685 244 2 ENSG00000200637.1 RNU5F-3P chr18 6017723 6017839 - snRNA KNOWN NA 117 117 1 ENSG00000266846.1 RP11-793A3.2 chr18 6025091 6082455 + antisense NOVEL OTTHUMG00000178851.1 57365 544 4 ENSG00000142634.11 EFHD2 chr1 15409895 15430343 + protein_coding KNOWN OTTHUMG00000002254.1 20449 2531 9 ENSG00000271475.1 RP4-799G3.1 chr1 228776312 228776865 + processed_pseudogene KNOWN OTTHUMG00000184481.1 554 554 1 ENSG00000264707.1 L3MBTL4-AS1 chr18 6256747 6260934 + lincRNA NOVEL OTTHUMG00000178852.1 4188 2044 3 ENSG00000279885.1 RP11-637N19.1 chr18 6394847 6398020 - TEC KNOWN OTTHUMG00000131573.3 3174 3174 1 ENSG00000199272.1 RNU6-349P chr18 6454962 6455068 + snRNA KNOWN NA 107 107 1 ENSG00000235552.4 RPL6P27 chr18 6462144 6463015 - transcribed_processed_pseudogene KNOWN OTTHUMG00000158161.2 872 872 3 ENSG00000266065.1 CTD-2124B20.2 chr18 6493420 6495668 + lincRNA NOVEL OTTHUMG00000178456.1 2249 567 2 ENSG00000265944.1 LINC01387 chr18 6511416 6590653 + lincRNA NOVEL OTTHUMG00000178464.2 79238 603 6 ENSG00000265174.1 CTD-2124B20.3 chr18 6557822 6558654 + sense_intronic NOVEL OTTHUMG00000178468.1 833 658 2 ENSG00000243591.3 RN7SL282P chr18 6601540 6601836 + misc_RNA KNOWN NA 297 297 1 ENSG00000261627.1 RP11-91I8.1 chr18 6641971 6642478 - lincRNA NOVEL OTTHUMG00000176116.1 508 508 1 ENSG00000279479.1 RP11-91I8.2 chr18 6727053 6728981 + TEC KNOWN OTTHUMG00000178469.1 1929 1929 1 ENSG00000271399.1 RP4-799G3.2 chr1 228858010 228858556 + processed_pseudogene KNOWN OTTHUMG00000184482.1 547 547 1 ENSG00000266441.1 RP11-91I8.3 chr18 6728821 6729862 - antisense NOVEL OTTHUMG00000178470.1 1042 491 2 ENSG00000088756.11 ARHGAP28 chr18 6729718 6915716 + protein_coding KNOWN OTTHUMG00000167698.9 185999 11910 137 ENSG00000263797.1 RP11-146G7.2 chr18 6873399 6875024 - antisense NOVEL OTTHUMG00000178874.1 1626 544 2 ENSG00000265933.4 LINC00668 chr18 6919496 6929966 - lincRNA NOVEL OTTHUMG00000178875.1 10471 4866 33 ENSG00000264127.1 SCML2P1 chr18 6926944 6928210 + processed_pseudogene KNOWN OTTHUMG00000178891.2 1267 1100 2 ENSG00000251897.1 RNU6-916P chr18 6936912 6937020 - snRNA KNOWN NA 109 109 1 ENSG00000101680.12 LAMA1 chr18 6941744 7117814 - protein_coding KNOWN OTTHUMG00000133478.4 176071 15872 157 ENSG00000265069.1 RP11-781P6.1 chr18 6954677 6957419 + antisense NOVEL OTTHUMG00000178876.1 2743 2295 2 ENSG00000265869.1 RP11-76K13.2 chr18 7064032 7064197 + processed_pseudogene KNOWN OTTHUMG00000178920.2 166 166 1 ENSG00000264475.1 RP11-76K13.3 chr18 7076817 7080123 + antisense NOVEL OTTHUMG00000179008.1 3307 607 3 ENSG00000229840.2 ISCA1P2 chr1 229042171 229042591 + processed_pseudogene KNOWN OTTHUMG00000037628.2 421 421 1 ENSG00000263716.1 SLC25A51P2 chr18 7134931 7135819 + processed_pseudogene KNOWN OTTHUMG00000178877.1 889 889 1 ENSG00000206422.2 LRRC30 chr18 7231125 7232047 + protein_coding KNOWN OTTHUMG00000178479.1 923 923 1 ENSG00000212626.1 SNORA48 chr18 7301020 7301153 - snoRNA NOVEL NA 134 134 1 ENSG00000173482.15 PTPRM chr18 7566782 8406861 + protein_coding KNOWN OTTHUMG00000131575.4 840080 9900 187 ENSG00000221631.1 AP000897.1 chr18 7738111 7738225 - miRNA NOVEL NA 115 115 1 ENSG00000266767.1 RP11-678G15.2 chr18 7741310 7754831 - antisense NOVEL OTTHUMG00000178929.1 13522 1737 6 ENSG00000264596.1 RP11-678G15.1 chr18 7814118 7815730 + sense_intronic NOVEL OTTHUMG00000178896.1 1613 1613 1 ENSG00000263827.1 AP005118.1 chr18 7840937 7841060 + miRNA NOVEL NA 124 124 1 ENSG00000199856.2 U3 chr18 7995570 7995785 + snoRNA NOVEL NA 216 216 1 ENSG00000273368.1 RP11-376P6.3 chr18 8154558 8155070 + sense_intronic NOVEL OTTHUMG00000186214.1 513 513 1 ENSG00000236975.1 RP5-1065P14.2 chr1 229092815 229094905 - lincRNA NOVEL OTTHUMG00000041351.1 2091 599 2 ENSG00000212067.1 AP005227.1 chr18 8227103 8227185 - miRNA NOVEL NA 83 83 1 ENSG00000266149.1 RP11-789C17.3 chr18 8360820 8367034 - antisense NOVEL OTTHUMG00000178930.1 6215 616 4 ENSG00000265413.1 RP11-789C17.1 chr18 8402847 8405161 + sense_intronic NOVEL OTTHUMG00000178912.1 2315 2315 1 ENSG00000263970.1 RP11-789C17.5 chr18 8406761 8406953 - antisense NOVEL OTTHUMG00000179009.1 193 193 1 ENSG00000266613.1 RFWD2P1 chr18 8412129 8414304 + processed_pseudogene KNOWN OTTHUMG00000178931.1 2176 2176 1 ENSG00000242985.3 RN7SL50P chr18 8471831 8472128 + misc_RNA KNOWN NA 298 298 1 ENSG00000229442.2 THEMIS3P chr18 8486997 8513849 + unitary_pseudogene KNOWN OTTHUMG00000154734.2 26853 1586 3 ENSG00000225212.4 AKR1B1P6 chr18 8545635 8546817 + processed_pseudogene KNOWN OTTHUMG00000178948.1 1183 839 2 ENSG00000206418.3 RAB12 chr18 8609445 8639381 + protein_coding KNOWN OTTHUMG00000178949.1 29937 2467 8 ENSG00000266708.1 RP11-661O13.1 chr18 8635179 8636347 - antisense NOVEL OTTHUMG00000178932.1 1169 780 2 ENSG00000233920.1 RP5-1061H20.5 chr1 229223461 229227562 - antisense NOVEL OTTHUMG00000037661.1 4102 792 2 ENSG00000263935.1 TOMM20P3 chr18 8688022 8688410 - processed_pseudogene KNOWN OTTHUMG00000179014.2 389 389 1 ENSG00000265962.1 GACAT2 chr18 8695856 8707621 - antisense NOVEL OTTHUMG00000178955.1 11766 818 2 ENSG00000168502.16 MTCL1 chr18 8705661 8832778 + protein_coding KNOWN OTTHUMG00000131594.10 127118 12665 104 ENSG00000252319.1 Y_RNA chr18 8720034 8720132 - misc_RNA NOVEL NA 99 99 1 ENSG00000272788.1 RP11-674N23.4 chr18 8801656 8802305 + sense_intronic NOVEL OTTHUMG00000186222.1 650 650 1 ENSG00000242058.2 RPS4XP19 chr18 9020029 9020764 + processed_pseudogene KNOWN OTTHUMG00000158162.3 736 736 1 ENSG00000178127.11 NDUFV2 chr18 9102630 9134345 + protein_coding KNOWN OTTHUMG00000131593.6 31716 2711 38 ENSG00000265257.4 RP11-21J18.1 chr18 9102736 9254346 + processed_transcript NOVEL OTTHUMG00000179147.1 151611 1050 11 ENSG00000263847.1 RP11-143J12.3 chr18 9112404 9115877 - antisense NOVEL OTTHUMG00000179034.3 3474 544 2 ENSG00000266053.2 NDUFV2-AS1 chr18 9121265 9136645 - antisense NOVEL OTTHUMG00000179232.2 15381 1432 8 ENSG00000177800.2 TMEM78 chr1 229249636 229251810 + protein_coding KNOWN OTTHUMG00000037629.2 2175 2175 1 ENSG00000101745.14 ANKRD12 chr18 9136228 9285985 + protein_coding KNOWN OTTHUMG00000131595.4 149758 12252 63 ENSG00000200883.1 Y_RNA chr18 9249649 9249746 - misc_RNA NOVEL NA 98 98 1 ENSG00000207092.1 Y_RNA chr18 9250110 9250211 + misc_RNA NOVEL NA 102 102 1 ENSG00000273284.1 RP11-888D10.4 chr18 9259388 9260390 + sense_intronic NOVEL OTTHUMG00000186223.1 1003 1003 1 ENSG00000264964.1 RP11-888D10.3 chr18 9315194 9334441 - lincRNA NOVEL OTTHUMG00000179109.1 19248 466 3 ENSG00000128791.10 TWSG1 chr18 9334767 9402420 + protein_coding KNOWN OTTHUMG00000131597.4 67654 4435 16 ENSG00000273335.1 RP11-61L19.2 chr18 9473421 9474006 - lincRNA NOVEL OTTHUMG00000186225.1 586 586 1 ENSG00000017797.10 RALBP1 chr18 9475009 9538116 + protein_coding KNOWN OTTHUMG00000131596.3 63108 4979 30 ENSG00000266805.1 RP11-61L19.1 chr18 9506242 9509726 + sense_intronic NOVEL OTTHUMG00000178671.1 3485 3485 1 ENSG00000251994.1 RNU2-27P chr18 9518119 9518260 - snRNA KNOWN NA 142 142 1 ENSG00000177788.5 RP5-1061H20.4 chr1 229258281 229271028 - lincRNA NOVEL OTTHUMG00000037660.1 12748 1155 4 ENSG00000273352.1 RP11-61L19.3 chr18 9519449 9520199 + sense_intronic NOVEL OTTHUMG00000186226.1 751 751 1 ENSG00000154845.14 PPP4R1 chr18 9546791 9615240 - protein_coding KNOWN OTTHUMG00000137466.3 68450 8131 174 ENSG00000266541.1 RP11-881L2.1 chr18 9587386 9590182 + antisense NOVEL OTTHUMG00000178596.2 2797 534 2 ENSG00000263627.1 PPP4R1-AS1 chr18 9615264 9619363 + lincRNA NOVEL OTTHUMG00000178597.1 4100 379 3 ENSG00000212572.1 RNU6-903P chr18 9617964 9618072 - snRNA KNOWN NA 109 109 1 ENSG00000264644.1 KRT18P8 chr18 9678248 9679493 - processed_pseudogene KNOWN OTTHUMG00000178672.1 1246 1246 1 ENSG00000168461.11 RAB31 chr18 9708165 9862551 + protein_coding KNOWN OTTHUMG00000178513.4 154387 5586 47 ENSG00000266891.1 RP11-692N5.2 chr18 9734882 9735602 - processed_pseudogene KNOWN OTTHUMG00000178673.1 721 368 2 ENSG00000266127.1 ZNF415P1 chr18 9785108 9787805 + processed_pseudogene KNOWN OTTHUMG00000178559.1 2698 1166 2 ENSG00000242651.3 RN7SL862P chr18 9830330 9830627 - misc_RNA KNOWN NA 298 298 1 ENSG00000240524.2 RP5-1061H20.3 chr1 229270927 229271599 - transcribed_processed_pseudogene KNOWN OTTHUMG00000037659.2 673 673 1 ENSG00000252680.1 RNA5SP449 chr18 9844717 9844846 - rRNA KNOWN NA 130 130 1 ENSG00000265564.1 PIGPP4 chr18 9880580 9880886 - processed_pseudogene KNOWN OTTHUMG00000178598.1 307 307 1 ENSG00000168454.11 TXNDC2 chr18 9885726 9889275 + protein_coding KNOWN OTTHUMG00000131602.4 3550 3392 16 ENSG00000272799.1 RP11-474N24.6 chr18 9912316 9912849 - lincRNA NOVEL OTTHUMG00000186228.1 534 534 1 ENSG00000101558.12 VAPA chr18 9914002 9960021 + protein_coding KNOWN OTTHUMG00000131603.5 46020 11880 37 ENSG00000223138.1 RNA5SP450 chr18 9923920 9924021 + rRNA KNOWN NA 102 102 1 ENSG00000263630.1 AP005271.1 chr18 10005100 10005197 - miRNA NOVEL NA 98 98 1 ENSG00000265554.1 RP11-419J16.1 chr18 10125340 10144406 + lincRNA NOVEL OTTHUMG00000178508.1 19067 412 2 ENSG00000264876.1 RP11-138E9.2 chr18 10323132 10372380 - lincRNA NOVEL OTTHUMG00000178510.1 49249 928 6 ENSG00000266102.1 RP11-243E13.2 chr18 10375103 10378114 + lincRNA NOVEL OTTHUMG00000178511.1 3012 472 2 ENSG00000168118.10 RAB4A chr1 229271062 229305894 + protein_coding KNOWN OTTHUMG00000037627.4 34833 3310 26 ENSG00000260913.1 LINC01254 chr18 10405133 10414515 - lincRNA NOVEL OTTHUMG00000176120.1 9383 3225 4 ENSG00000154856.11 APCDD1 chr18 10454628 10489948 + protein_coding KNOWN OTTHUMG00000131635.4 35321 5943 22 ENSG00000134265.11 NAPG chr18 10525905 10552761 + protein_coding KNOWN OTTHUMG00000179119.4 26857 5586 56 ENSG00000265728.1 RP11-883A18.3 chr18 10594590 10604798 + lincRNA NOVEL OTTHUMG00000179172.1 10209 855 5 ENSG00000266604.1 RP11-856M7.6 chr18 10612304 10626353 - lincRNA NOVEL OTTHUMG00000178562.1 14050 860 5 ENSG00000264503.1 RP11-856M7.7 chr18 10622123 10622267 - processed_pseudogene KNOWN OTTHUMG00000178567.1 145 145 1 ENSG00000264311.1 CCDC58P1 chr18 10623876 10624305 - processed_pseudogene KNOWN OTTHUMG00000178563.1 430 430 1 ENSG00000264072.1 RP11-856M7.4 chr18 10627646 10628846 - lincRNA NOVEL OTTHUMG00000178556.1 1201 422 2 ENSG00000266470.1 RP11-856M7.8 chr18 10632238 10632396 + unprocessed_pseudogene KNOWN OTTHUMG00000179208.1 159 159 1 ENSG00000265038.1 PMM2P1 chr18 10636670 10637399 + processed_pseudogene KNOWN OTTHUMG00000178557.1 730 730 1 ENSG00000213029.3 SPHAR chr1 229304857 229305504 + protein_coding KNOWN OTTHUMG00000058947.1 648 648 1 ENSG00000260779.1 RP11-856M7.1 chr18 10661933 10666887 + antisense NOVEL OTTHUMG00000176124.1 4955 3566 3 ENSG00000154864.10 PIEZO2 chr18 10666483 11148762 - protein_coding KNOWN OTTHUMG00000178507.12 482280 14796 308 ENSG00000264843.1 RP11-856M7.2 chr18 10704297 10709599 + antisense NOVEL OTTHUMG00000178535.1 5303 823 3 ENSG00000264714.1 RP11-21G15.1 chr18 10724619 10728539 + transcribed_processed_pseudogene KNOWN OTTHUMG00000178481.2 3921 3016 3 ENSG00000274838.1 MIR6788 chr18 10759584 10759649 - miRNA KNOWN NA 66 66 1 ENSG00000263952.4 RP11-513M1.1 chr18 10893617 10908783 + antisense NOVEL OTTHUMG00000178501.1 15167 800 4 ENSG00000263682.1 RP11-93H10.1 chr18 11326270 11328832 + unprocessed_pseudogene KNOWN OTTHUMG00000178558.2 2563 1647 3 ENSG00000267051.1 RP11-128P17.2 chr18 11366913 11378409 - lincRNA NOVEL OTTHUMG00000178502.1 11497 810 3 ENSG00000273119.1 RP11-128P17.4 chr18 11390033 11390729 - lincRNA NOVEL OTTHUMG00000186230.1 697 697 1 ENSG00000267564.1 RP11-128P17.3 chr18 11447756 11489369 - lincRNA NOVEL OTTHUMG00000180595.1 41614 279 2 ENSG00000162438.10 CTRC chr1 15438439 15449242 + protein_coding KNOWN OTTHUMG00000002255.1 10804 3486 22 ENSG00000237481.1 RP4-803J11.2 chr1 229319403 229323087 + antisense NOVEL OTTHUMG00000037662.1 3685 640 2 ENSG00000267425.1 RP11-128P17.1 chr18 11454478 11465996 + lincRNA NOVEL OTTHUMG00000178503.1 11519 504 4 ENSG00000267252.4 LINC01255 chr18 11488570 11506983 + lincRNA NOVEL OTTHUMG00000180596.1 18414 1983 19 ENSG00000267371.1 RP11-712C7.2 chr18 11552366 11552847 + processed_pseudogene KNOWN OTTHUMG00000180597.1 482 482 1 ENSG00000236396.6 SLC35G4 chr18 11609596 11610612 + processed_pseudogene KNOWN OTTHUMG00000180598.3 1017 1017 1 ENSG00000267794.1 RP11-677O4.5 chr18 11618208 11618315 + processed_pseudogene KNOWN OTTHUMG00000180599.1 108 108 1 ENSG00000257513.6 NPIPB1P chr18 11619509 11639699 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000170512.3 20191 1133 15 ENSG00000267143.1 RP11-677O4.6 chr18 11620717 11621158 - lincRNA NOVEL OTTHUMG00000180604.1 442 296 2 ENSG00000267773.1 RP11-677O4.4 chr18 11644336 11644824 + processed_pseudogene KNOWN OTTHUMG00000180600.1 489 489 1 ENSG00000260759.1 RP11-677O4.2 chr18 11666456 11670165 - lincRNA NOVEL OTTHUMG00000176127.1 3710 3710 1 ENSG00000141404.14 GNAL chr18 11688956 11885685 + protein_coding KNOWN OTTHUMG00000131660.3 196730 8445 82 ENSG00000154429.9 CCSAP chr1 229321005 229343294 - protein_coding KNOWN OTTHUMG00000037663.2 22290 6263 14 ENSG00000267333.1 ASNSP6 chr18 11745626 11747581 + processed_pseudogene KNOWN OTTHUMG00000180610.1 1956 1618 2 ENSG00000267455.1 RP11-78A19.2 chr18 11810406 11811484 - antisense NOVEL OTTHUMG00000180620.1 1079 568 2 ENSG00000255112.2 CHMP1B chr18 11851396 11854449 + protein_coding KNOWN OTTHUMG00000165820.2 3054 3054 3 ENSG00000267165.1 RP11-78A19.3 chr18 11851414 11852751 - antisense NOVEL OTTHUMG00000180621.1 1338 553 2 ENSG00000272703.1 RP11-78A19.4 chr18 11857155 11857554 - antisense NOVEL OTTHUMG00000186231.1 400 400 1 ENSG00000154889.15 MPPE1 chr18 11882622 11909223 - protein_coding KNOWN OTTHUMG00000131661.4 26602 7630 183 ENSG00000273141.1 RP11-820I16.4 chr18 11908712 11909223 + antisense NOVEL OTTHUMG00000186232.1 512 512 1 ENSG00000267079.1 RP11-820I16.1 chr18 11910634 11914344 - lincRNA NOVEL OTTHUMG00000180632.1 3711 379 2 ENSG00000267661.1 RP11-820I16.2 chr18 11928838 11929476 + processed_pseudogene KNOWN OTTHUMG00000180663.1 639 329 2 ENSG00000141401.10 IMPA2 chr18 11981025 12030883 + protein_coding KNOWN OTTHUMG00000131693.3 49859 3825 69 ENSG00000252506.1 RNU6-180P chr1 229383128 229383188 + snRNA KNOWN NA 61 61 1 ENSG00000266955.1 RP11-820I16.3 chr18 11993988 11994938 - antisense NOVEL OTTHUMG00000180664.1 951 528 2 ENSG00000267480.1 RP11-703I16.1 chr18 12031178 12032181 - antisense NOVEL OTTHUMG00000180665.1 1004 527 2 ENSG00000266995.1 RP11-703I16.3 chr18 12040101 12040300 - processed_pseudogene KNOWN OTTHUMG00000180680.1 200 200 1 ENSG00000267292.1 RP11-703I16.2 chr18 12050309 12050672 - processed_pseudogene KNOWN OTTHUMG00000180681.1 364 364 1 ENSG00000212712.2 AP002414.1 chr18 12056676 12057822 - processed_pseudogene KNOWN OTTHUMG00000073721.2 1147 1147 1 ENSG00000267533.1 RP11-815J4.7 chr18 12067173 12068417 - processed_pseudogene KNOWN OTTHUMG00000180682.1 1245 1148 2 ENSG00000256616.3 RP11-815J4.6 chr18 12073232 12076654 - transcribed_processed_pseudogene KNOWN OTTHUMG00000180683.1 3423 3423 2 ENSG00000267722.1 RP11-815J4.1 chr18 12081540 12085267 + lincRNA NOVEL OTTHUMG00000180666.1 3728 258 3 ENSG00000267478.1 RP11-815J4.5 chr18 12091674 12093141 - processed_pseudogene KNOWN OTTHUMG00000180684.1 1468 1468 1 ENSG00000181626.11 ANKRD62 chr18 12093853 12129749 + protein_coding KNOWN OTTHUMG00000180673.2 35897 4812 23 ENSG00000252051.1 RN7SKP276 chr1 229410500 229410767 - misc_RNA KNOWN NA 268 268 1 ENSG00000200827.1 RNU6-324P chr18 12098427 12098532 + snRNA KNOWN NA 106 106 1 ENSG00000267162.1 SDHDP1 chr18 12101997 12102470 - processed_pseudogene KNOWN OTTHUMG00000180685.1 474 474 1 ENSG00000267116.1 RP11-64C12.7 chr18 12192203 12192934 - processed_pseudogene KNOWN OTTHUMG00000180715.1 732 732 1 ENSG00000279285.1 RP11-64C12.5 chr18 12199345 12200089 + TEC KNOWN OTTHUMG00000180716.1 745 745 1 ENSG00000267643.1 RP11-64C12.4 chr18 12200779 12201979 + lincRNA NOVEL OTTHUMG00000180717.1 1201 422 2 ENSG00000267733.4 RP11-64C12.3 chr18 12201982 12223539 + transcribed_processed_pseudogene KNOWN OTTHUMG00000180718.1 21558 2209 15 ENSG00000267076.1 CCDC58P3 chr18 12211378 12211807 + processed_pseudogene KNOWN OTTHUMG00000180719.1 430 430 1 ENSG00000267247.1 RP11-64C12.6 chr18 12230411 12231573 - lincRNA NOVEL OTTHUMG00000180720.1 1163 485 2 ENSG00000267663.1 RP11-64C12.9 chr18 12246589 12247055 + processed_pseudogene KNOWN OTTHUMG00000180721.1 467 467 1 ENSG00000176194.16 CIDEA chr18 12254319 12277595 + protein_coding KNOWN OTTHUMG00000131691.3 23277 1852 20 ENSG00000230331.1 RP5-1068B5.1 chr1 229425020 229425650 + processed_pseudogene KNOWN OTTHUMG00000038007.1 631 350 2 ENSG00000280302.1 RP11-64C12.1 chr18 12279427 12282739 + TEC KNOWN OTTHUMG00000176130.1 3313 3313 1 ENSG00000267069.1 RP11-64C12.8 chr18 12288308 12291488 + lincRNA NOVEL OTTHUMG00000180722.1 3181 733 2 ENSG00000199702.1 RNU6-170P chr18 12304091 12304194 - snRNA KNOWN NA 104 104 1 ENSG00000176014.11 TUBB6 chr18 12307669 12344320 + protein_coding KNOWN OTTHUMG00000131692.2 36652 4117 54 ENSG00000141385.8 AFG3L2 chr18 12328944 12377314 - protein_coding KNOWN OTTHUMG00000131695.2 48371 6624 26 ENSG00000251937.1 RNU7-129P chr18 12400412 12400473 + snRNA KNOWN NA 62 62 1 ENSG00000141391.12 SLMO1 chr18 12407896 12432238 + protein_coding KNOWN OTTHUMG00000131694.2 24343 2643 54 ENSG00000267108.1 RP11-861E21.1 chr18 12432897 12437635 + lincRNA NOVEL OTTHUMG00000180775.1 4739 168 2 ENSG00000267199.1 RP11-861E21.2 chr18 12438890 12448205 + antisense NOVEL OTTHUMG00000180776.1 9316 5428 6 ENSG00000134278.13 SPIRE1 chr18 12446512 12658134 - protein_coding KNOWN OTTHUMG00000153940.3 211623 6544 142 ENSG00000143632.13 ACTA1 chr1 229431245 229434098 - protein_coding KNOWN OTTHUMG00000038006.3 2854 1495 13 ENSG00000267515.1 RP11-861E21.3 chr18 12450447 12451042 + processed_pseudogene KNOWN OTTHUMG00000180820.1 596 596 1 ENSG00000128789.19 PSMG2 chr18 12658043 12725740 + protein_coding KNOWN OTTHUMG00000131703.3 67698 3356 43 ENSG00000101624.9 CEP76 chr18 12661833 12702777 - protein_coding KNOWN OTTHUMG00000131701.2 40945 6158 78 ENSG00000267249.1 RP11-973H7.3 chr18 12670426 12671145 - sense_intronic NOVEL OTTHUMG00000180892.1 720 720 1 ENSG00000266961.1 RP11-973H7.5 chr18 12738965 12750068 - lincRNA NOVEL OTTHUMG00000180893.1 11104 310 2 ENSG00000267654.1 RP11-973H7.4 chr18 12739490 12749421 - lincRNA NOVEL OTTHUMG00000180894.1 9932 569 2 ENSG00000201466.1 Y_RNA chr18 12760717 12760818 + misc_RNA NOVEL NA 102 102 1 ENSG00000260302.1 RP11-973H7.1 chr18 12774651 12775923 - lincRNA NOVEL OTTHUMG00000176133.1 1273 1273 1 ENSG00000175354.17 PTPN2 chr18 12785478 12929643 - protein_coding KNOWN OTTHUMG00000131702.3 144166 6921 92 ENSG00000267570.1 STK25P1 chr18 12911186 12912023 + processed_pseudogene KNOWN OTTHUMG00000181907.1 838 838 1 ENSG00000069248.11 NUP133 chr1 229440260 229508341 - protein_coding KNOWN OTTHUMG00000039462.3 68082 6080 38 ENSG00000267336.1 EIF4A2P1 chr18 12912844 12913906 + processed_pseudogene KNOWN OTTHUMG00000181908.1 1063 1063 1 ENSG00000085415.14 SEH1L chr18 12947133 12987536 + protein_coding KNOWN OTTHUMG00000181909.1 40404 10481 54 ENSG00000266969.1 RP11-773H22.4 chr18 12984694 12991173 - antisense NOVEL OTTHUMG00000181910.1 6480 474 3 ENSG00000101639.17 CEP192 chr18 12991362 13125052 + protein_coding KNOWN OTTHUMG00000160693.3 133691 9901 310 ENSG00000267656.1 RP11-807E13.3 chr18 13139780 13140489 - processed_pseudogene KNOWN OTTHUMG00000181947.1 710 710 1 ENSG00000267032.1 RP11-807E13.2 chr18 13151637 13152689 - processed_pseudogene KNOWN OTTHUMG00000181948.1 1053 1053 1 ENSG00000267286.1 RP11-794M8.2 chr18 13183402 13185617 - lincRNA NOVEL OTTHUMG00000181949.1 2216 466 2 ENSG00000278652.1 AP001198.1 chr18 13195652 13195703 - miRNA NOVEL NA 52 52 1 ENSG00000267239.1 RP11-794M8.1 chr18 13203774 13216367 - antisense NOVEL OTTHUMG00000181950.1 12594 2086 4 ENSG00000168675.17 LDLRAD4 chr18 13217498 13652755 + protein_coding KNOWN OTTHUMG00000181925.3 435258 16759 62 ENSG00000226920.1 RP5-1068B5.5 chr1 229440284 229441020 - 3prime_overlapping_ncrna NOVEL OTTHUMG00000189502.1 737 478 2 ENSG00000267177.1 RP11-756J15.3 chr18 13234945 13236470 - antisense NOVEL OTTHUMG00000181951.1 1526 228 2 ENSG00000279020.1 C18orf15 chr18 13239543 13242076 + TEC KNOWN OTTHUMG00000181926.1 2534 2534 1 ENSG00000279275.1 RP11-756J15.2 chr18 13279415 13280110 - TEC KNOWN OTTHUMG00000181927.1 696 696 1 ENSG00000267393.1 RP11-691H4.3 chr18 13362203 13366243 - antisense NOVEL OTTHUMG00000181928.1 4041 480 2 ENSG00000267690.1 LDLRAD4-AS1 chr18 13419421 13427480 - antisense NOVEL OTTHUMG00000181929.1 8060 2190 4 ENSG00000266146.1 MIR5190 chr18 13459947 13460026 + miRNA KNOWN NA 80 80 1 ENSG00000267694.1 RP11-691H4.4 chr18 13461020 13470823 - antisense NOVEL OTTHUMG00000181955.1 9804 498 4 ENSG00000267529.3 RP11-53B2.1 chr18 13471012 13472709 - processed_transcript NOVEL OTTHUMG00000181931.2 1698 1698 3 ENSG00000267702.1 RP11-53B2.2 chr18 13486462 13490676 + sense_intronic NOVEL OTTHUMG00000181932.1 4215 4215 1 ENSG00000267366.1 RP11-53B2.5 chr18 13500641 13501289 - antisense NOVEL OTTHUMG00000181956.1 649 487 2 ENSG00000223635.1 RP4-613A2.1 chr1 229508501 229514272 + antisense NOVEL OTTHUMG00000039467.1 5772 591 3 ENSG00000267136.1 RP11-53B2.3 chr18 13514520 13522888 - antisense NOVEL OTTHUMG00000181933.1 8369 4745 2 ENSG00000272746.1 RP11-53B2.6 chr18 13526078 13526688 + sense_intronic NOVEL OTTHUMG00000186233.1 611 611 1 ENSG00000267503.1 RP11-53B2.4 chr18 13561399 13565035 - antisense NOVEL OTTHUMG00000181952.1 3637 665 3 ENSG00000263527.1 MIR4526 chr18 13611114 13611200 + miRNA KNOWN NA 87 87 1 ENSG00000266954.1 RP11-701H16.4 chr18 13644815 13645685 - antisense NOVEL OTTHUMG00000181935.1 871 538 2 ENSG00000177150.11 FAM210A chr18 13663347 13726663 - protein_coding KNOWN OTTHUMG00000131719.2 63317 4681 25 ENSG00000279962.1 RP11-720L3.1 chr18 13710249 13710484 - TEC KNOWN OTTHUMG00000181953.1 236 236 1 ENSG00000242707.3 RN7SL362P chr18 13715102 13715368 - misc_RNA KNOWN NA 267 267 1 ENSG00000101654.16 RNMT chr18 13726660 13764558 + protein_coding KNOWN OTTHUMG00000131718.3 37899 6982 78 ENSG00000211528.2 AP001525.1 chr18 13823915 13823986 - miRNA NOVEL NA 72 72 1 ENSG00000135776.4 ABCB10 chr1 229516582 229558695 - protein_coding KNOWN OTTHUMG00000039471.1 42114 4256 19 ENSG00000176136.5 MC5R chr18 13824155 13826743 + protein_coding KNOWN OTTHUMG00000131720.2 2589 1320 3 ENSG00000185231.4 MC2R chr18 13882044 13915707 - protein_coding KNOWN OTTHUMG00000131721.2 33664 3734 4 ENSG00000243779.1 RP11-681N23.1 chr18 13919603 13919923 - processed_pseudogene KNOWN OTTHUMG00000158167.1 321 321 1 ENSG00000279352.1 RP11-411B10.7 chr18 14010054 14010917 + TEC KNOWN OTTHUMG00000182054.1 864 864 2 ENSG00000270469.1 RP11-411B10.8 chr18 14053951 14054761 + processed_pseudogene KNOWN OTTHUMG00000184865.1 811 811 1 ENSG00000175322.10 ZNF519 chr18 14057457 14132490 - protein_coding KNOWN OTTHUMG00000182055.2 75034 15787 48 ENSG00000267756.1 RP11-411B10.4 chr18 14074912 14075741 - unprocessed_pseudogene KNOWN OTTHUMG00000182056.1 830 830 1 ENSG00000267150.1 RP11-411B10.2 chr18 14089935 14091019 + antisense NOVEL OTTHUMG00000182057.1 1085 1085 1 ENSG00000267356.1 RP11-411B10.3 chr18 14104542 14105226 + antisense NOVEL OTTHUMG00000182058.1 685 517 2 ENSG00000252234.1 AC006557.1 chr18 14118594 14118702 - miRNA NOVEL NA 109 109 1 ENSG00000142615.7 CELA2A chr1 15456728 15472091 + protein_coding KNOWN OTTHUMG00000002258.1 15364 1519 14 ENSG00000199672.1 RNU4-21P chr1 229535064 229535189 - snRNA KNOWN NA 126 126 1 ENSG00000267704.1 RP11-411B10.6 chr18 14137710 14139272 + processed_pseudogene KNOWN OTTHUMG00000182059.1 1563 1563 1 ENSG00000267324.1 RP11-411B10.5 chr18 14143596 14151139 - processed_pseudogene KNOWN OTTHUMG00000182060.1 7544 1240 11 ENSG00000175319.3 NF1P5 chr18 14153001 14157342 - processed_pseudogene KNOWN OTTHUMG00000182061.1 4342 448 4 ENSG00000186481.14 ANKRD20A5P chr18 14179097 14234797 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000157172.4 55701 5287 42 ENSG00000212329.1 RNU6-316P chr18 14190700 14190806 + snRNA KNOWN NA 107 107 1 ENSG00000266145.1 RHOT1P1 chr18 14222008 14222331 + processed_pseudogene KNOWN OTTHUMG00000178664.1 324 324 1 ENSG00000264222.1 RP11-757O6.1 chr18 14244625 14252140 + lincRNA NOVEL OTTHUMG00000178665.1 7516 566 5 ENSG00000274214.1 RP11-757O6.6 chr18 14253548 14254075 + processed_pseudogene KNOWN OTTHUMG00000187931.1 528 528 1 ENSG00000265787.1 CYP4F35P chr18 14337423 14342525 + lincRNA NOVEL OTTHUMG00000178670.1 5103 2877 7 ENSG00000277743.1 RP11-757O6.7 chr18 14346214 14346923 - processed_pseudogene KNOWN OTTHUMG00000187932.1 710 710 1 ENSG00000201492.1 RNA5SP78 chr1 229549905 229550022 + rRNA KNOWN NA 118 118 1 ENSG00000265437.1 RP11-757O6.4 chr18 14361434 14361943 - processed_pseudogene KNOWN OTTHUMG00000178676.1 510 510 1 ENSG00000187589.8 TERF1P2 chr18 14377546 14378757 - processed_pseudogene KNOWN OTTHUMG00000178678.1 1212 1212 1 ENSG00000265296.1 FEM1AP2 chr18 14391913 14393909 - processed_pseudogene KNOWN OTTHUMG00000178677.1 1997 1997 1 ENSG00000274057.1 AP006261.1 chr18 14430629 14430714 - miRNA NOVEL NA 86 86 1 ENSG00000266605.1 LONRF2P1 chr18 14450216 14450883 - processed_pseudogene KNOWN OTTHUMG00000178699.1 668 668 1 ENSG00000265766.2 CXADRP3 chr18 14477955 14499278 - lincRNA NOVEL OTTHUMG00000178700.1 21324 1955 8 ENSG00000266242.1 GRAMD4P7 chr18 14485806 14487501 + processed_pseudogene KNOWN OTTHUMG00000178701.1 1696 1232 2 ENSG00000183206.15 POTEC chr18 14507339 14543585 - protein_coding KNOWN OTTHUMG00000162963.3 36247 7118 49 ENSG00000200132.1 RNU6-1021P chr18 14531676 14531782 - snRNA KNOWN NA 107 107 1 ENSG00000265340.1 OR4K7P chr18 14570844 14571788 + unprocessed_pseudogene KNOWN OTTHUMG00000178702.1 945 945 1 ENSG00000229367.1 HMGN2P19 chr1 229570532 229570796 + processed_pseudogene KNOWN OTTHUMG00000039469.1 265 265 1 ENSG00000266693.1 OR4K8P chr18 14613137 14614184 + unprocessed_pseudogene KNOWN OTTHUMG00000178703.1 1048 1048 1 ENSG00000264570.1 SNX19P3 chr18 14629832 14632806 - processed_pseudogene KNOWN OTTHUMG00000178704.1 2975 2975 1 ENSG00000273732.1 RP11-1157N2__A.2 chr18 14680604 14681106 - unprocessed_pseudogene KNOWN OTTHUMG00000188031.1 503 503 1 ENSG00000276318.1 RP11-1157N2__A.1 chr18 14695422 14706597 + unprocessed_pseudogene KNOWN OTTHUMG00000187942.1 11176 584 5 ENSG00000180777.12 ANKRD30B chr18 14728272 14852738 + protein_coding KNOWN OTTHUMG00000178841.1 124467 5982 79 ENSG00000200645.1 RNU6-1210P chr18 14759188 14759294 + snRNA KNOWN NA 107 107 1 ENSG00000265481.1 AP006564.1 chr18 14771249 14771327 + miRNA NOVEL NA 79 79 1 ENSG00000265737.1 RP11-1157N2__B.2 chr18 14816151 14825249 - antisense NOVEL OTTHUMG00000178842.1 9099 586 2 ENSG00000265499.1 MIR3156-2 chr18 14830166 14830242 + miRNA KNOWN NA 77 77 1 ENSG00000265786.1 RP11-527H14.6 chr18 14877611 14884052 + lincRNA NOVEL OTTHUMG00000178808.1 6442 499 4 ENSG00000135801.8 TAF5L chr1 229593111 229626047 - protein_coding KNOWN OTTHUMG00000039463.2 32937 6412 20 ENSG00000264061.1 FGF7P1 chr18 14888709 14890086 - unprocessed_pseudogene KNOWN OTTHUMG00000178809.1 1378 288 2 ENSG00000263618.4 RP11-527H14.4 chr18 14903580 14915628 + lincRNA NOVEL OTTHUMG00000178810.1 12049 916 7 ENSG00000266554.1 LINC01443 chr18 14946267 14973770 + lincRNA NOVEL OTTHUMG00000178811.1 27504 2275 6 ENSG00000264301.1 LINC01444 chr18 14969001 14970468 - lincRNA NOVEL OTTHUMG00000178812.1 1468 1336 4 ENSG00000263821.1 RP11-527H14.1 chr18 14978739 14979839 + lincRNA NOVEL OTTHUMG00000178813.1 1101 1101 1 ENSG00000279042.1 RP11-805F19.3 chr18 14990707 14993235 - TEC KNOWN OTTHUMG00000178814.1 2529 2529 1 ENSG00000266522.1 RP11-805F19.4 chr18 15003975 15006352 - unprocessed_pseudogene KNOWN OTTHUMG00000178815.1 2378 1175 4 ENSG00000278923.1 AP005242.1 chr18 15057125 15066579 - protein_coding KNOWN NA 9455 308 2 ENSG00000263635.1 RP11-805F19.2 chr18 15075445 15122767 + lincRNA NOVEL OTTHUMG00000178816.1 47323 467 3 ENSG00000264880.1 RP11-805F19.1 chr18 15159724 15164467 - lincRNA NOVEL OTTHUMG00000178817.1 4744 525 2 ENSG00000135763.8 URB2 chr1 229626234 229660199 + protein_coding KNOWN OTTHUMG00000039464.1 33966 6001 13 ENSG00000265015.1 RP11-454P7.3 chr18 15196999 15197775 - transcribed_processed_pseudogene KNOWN OTTHUMG00000178818.1 777 467 3 ENSG00000265631.1 BNIP3P3 chr18 15247429 15247997 - processed_pseudogene KNOWN OTTHUMG00000178819.1 569 569 1 ENSG00000266818.1 RP11-454P7.1 chr18 15254418 15271744 + unprocessed_pseudogene KNOWN OTTHUMG00000178820.1 17327 1796 3 ENSG00000215512.8 AP005901.1 chr18 15307663 15330282 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000163472.1 22620 2970 20 ENSG00000222087.1 RNU6-721P chr18 15320840 15320944 - snRNA KNOWN NA 105 105 1 ENSG00000067900.6 ROCK1 chr18 20946906 21111851 - protein_coding KNOWN OTTHUMG00000131723.3 164946 11064 44 ENSG00000216205.1 AC036178.1 chr18 21062383 21062473 - miRNA NOVEL NA 91 91 1 ENSG00000244527.1 RP11-254G11.1 chr18 21119182 21119661 - processed_pseudogene KNOWN OTTHUMG00000158172.1 480 480 1 ENSG00000251886.1 RNU6-120P chr18 21120404 21120506 - snRNA KNOWN NA 103 103 1 ENSG00000263748.1 EXOGP1 chr18 21182503 21183499 - processed_pseudogene KNOWN OTTHUMG00000178591.1 997 997 1 ENSG00000213028.3 RP11-108F13.2 chr1 229688999 229689904 - processed_pseudogene KNOWN OTTHUMG00000039466.1 906 906 1 ENSG00000265984.1 RP11-699A5.2 chr18 21240675 21241371 - lincRNA NOVEL OTTHUMG00000178592.1 697 428 2 ENSG00000141449.13 GREB1L chr18 21242242 21525417 + protein_coding KNOWN OTTHUMG00000178892.2 283176 10572 160 ENSG00000265948.1 RP11-296E23.2 chr18 21316878 21317795 + sense_intronic NOVEL OTTHUMG00000178918.1 918 361 2 ENSG00000265751.1 RP11-296E23.1 chr18 21380286 21451017 - antisense NOVEL OTTHUMG00000178893.1 70732 679 4 ENSG00000221139.1 SNORD23 chr18 21450653 21450756 - snoRNA NOVEL NA 104 104 1 ENSG00000141446.9 ESCO1 chr18 21529281 21600884 - protein_coding KNOWN OTTHUMG00000178919.1 71604 5288 34 ENSG00000167088.9 SNRPD1 chr18 21612267 21633524 + protein_coding KNOWN OTTHUMG00000178934.3 21258 4909 13 ENSG00000158201.8 ABHD3 chr18 21650897 21704805 - protein_coding KNOWN OTTHUMG00000179099.2 53909 4366 52 ENSG00000264188.1 RP11-13N13.5 chr18 21661787 21662395 - sense_intronic NOVEL OTTHUMG00000179282.1 609 336 2 ENSG00000265656.1 RP11-13N13.6 chr18 21673628 21682561 + antisense NOVEL OTTHUMG00000179283.1 8934 447 2 ENSG00000225984.1 HMGB1P26 chr1 229705234 229705861 - processed_pseudogene KNOWN OTTHUMG00000039468.1 628 628 1 ENSG00000221493.1 MIR320C1 chr18 21683510 21683597 + miRNA KNOWN NA 88 88 1 ENSG00000101752.10 MIB1 chr18 21704957 21870957 + protein_coding KNOWN OTTHUMG00000131753.3 166001 10033 51 ENSG00000252677.1 SNORA81 chr18 21711950 21712119 - snoRNA NOVEL NA 170 170 1 ENSG00000281568.1 AC106037.1 chr18 21712017 21712119 - miRNA NOVEL NA 103 103 1 ENSG00000200750.1 Y_RNA chr18 21724119 21724229 + misc_RNA NOVEL NA 111 111 1 ENSG00000264183.1 AC091038.1 chr18 21776878 21776977 + miRNA NOVEL NA 100 100 1 ENSG00000242971.3 RN7SL233P chr18 21793883 21794159 + misc_RNA KNOWN NA 277 277 1 ENSG00000199977.1 SNORA73 chr18 21817624 21817828 + snoRNA NOVEL NA 205 205 1 ENSG00000265142.5 MIR133A1HG chr18 21825487 21831410 - antisense NOVEL OTTHUMG00000179284.1 5924 4376 9 ENSG00000276792.1 MIR133A1 chr18 21825698 21825785 - miRNA KNOWN NA 88 88 1 ENSG00000227043.1 RP11-286M16.1 chr1 229875550 229885752 - lincRNA NOVEL OTTHUMG00000039465.1 10203 385 2 ENSG00000278753.1 AC103987.1 chr18 21828996 21829106 - miRNA NOVEL NA 111 111 1 ENSG00000243303.1 RP11-268I9.1 chr18 21854640 21854987 - processed_pseudogene KNOWN OTTHUMG00000158174.1 348 348 1 ENSG00000264149.1 RP11-268I9.3 chr18 21871446 21893996 - lincRNA NOVEL OTTHUMG00000179285.1 22551 417 2 ENSG00000252325.1 RNU6-1038P chr18 21879801 21879904 + snRNA KNOWN NA 104 104 1 ENSG00000264289.1 RP11-268I9.4 chr18 21914369 21914660 - processed_pseudogene KNOWN OTTHUMG00000179286.1 292 292 1 ENSG00000222520.1 RNA5SP451 chr18 21928985 21929094 - rRNA KNOWN NA 110 110 1 ENSG00000265758.1 RP11-595B24.1 chr18 21981121 22051159 + lincRNA NOVEL OTTHUMG00000179438.1 70039 955 8 ENSG00000265568.1 AC091043.1 chr18 21999569 21999651 + miRNA NOVEL NA 83 83 1 ENSG00000263588.1 RP11-595B24.2 chr18 22088060 22098780 + lincRNA NOVEL OTTHUMG00000179439.1 10721 453 2 ENSG00000221363.1 RNU6ATAC20P chr18 22130603 22130729 - snRNA KNOWN NA 127 127 1 ENSG00000228058.1 RP11-552D4.1 chr1 230002730 230007162 + lincRNA NOVEL OTTHUMG00000037758.1 4433 654 2 ENSG00000266010.1 GATA6-AS1 chr18 22166898 22168968 - lincRNA NOVEL OTTHUMG00000179440.1 2071 1823 10 ENSG00000141448.7 GATA6 chr18 22169443 22202528 + protein_coding KNOWN OTTHUMG00000131767.2 33086 3945 13 ENSG00000264012.1 RP11-627G18.2 chr18 22175465 22176662 - antisense NOVEL OTTHUMG00000179441.1 1198 359 2 ENSG00000201852.1 RNU6-702P chr18 22180112 22180218 - snRNA KNOWN NA 107 107 1 ENSG00000266283.1 RP11-627G18.1 chr18 22200619 22205229 - antisense NOVEL OTTHUMG00000179442.1 4611 770 2 ENSG00000264825.1 RP11-627G18.4 chr18 22213778 22228029 + lincRNA NOVEL OTTHUMG00000179443.1 14252 366 2 ENSG00000273348.1 RP11-535A5.1 chr18 22347846 22348252 - lincRNA NOVEL OTTHUMG00000186239.1 407 407 1 ENSG00000212710.4 CTAGE1 chr18 22413601 22417915 - protein_coding KNOWN OTTHUMG00000165867.3 4315 4315 2 ENSG00000270855.1 RP11-863N1.4 chr18 22418829 22419294 - processed_pseudogene KNOWN OTTHUMG00000185042.1 466 466 1 ENSG00000239490.1 RPS4XP18 chr18 22586465 22587227 + processed_pseudogene KNOWN OTTHUMG00000158176.3 763 763 1 ENSG00000211525.2 BX323860.1 chr1 230049182 230049250 - miRNA NOVEL NA 69 69 1 ENSG00000206827.1 RNU6-1032P chr18 22647582 22647688 + snRNA KNOWN NA 107 107 1 ENSG00000265943.1 RP11-739L10.1 chr18 22699481 22933764 - antisense NOVEL OTTHUMG00000179447.1 234284 570 4 ENSG00000266850.1 RP11-370A5.1 chr18 22723491 22907721 - antisense NOVEL OTTHUMG00000179448.1 184231 1229 12 ENSG00000101773.15 RBBP8 chr18 22798261 23026488 + protein_coding KNOWN OTTHUMG00000131769.4 228228 5091 145 ENSG00000273232.1 RP11-370A5.2 chr18 22882825 22883357 - sense_intronic NOVEL OTTHUMG00000186240.1 533 533 1 ENSG00000265939.1 UBE2CP2 chr18 22900486 22900995 - processed_pseudogene KNOWN OTTHUMG00000179444.1 510 510 1 ENSG00000264817.1 MIR4741 chr18 22933349 22933438 + miRNA KNOWN NA 90 90 1 ENSG00000242182.3 RN7SL745P chr18 23004564 23004862 + misc_RNA KNOWN NA 299 299 1 ENSG00000223023.1 Y_RNA chr18 23024596 23024703 + misc_RNA NOVEL NA 108 108 1 ENSG00000134508.11 CABLES1 chr18 23134564 23260467 + protein_coding KNOWN OTTHUMG00000179186.5 125904 6654 57 ENSG00000215704.8 CELA2B chr1 15465909 15491400 + protein_coding KNOWN OTTHUMG00000002259.1 25492 1457 21 ENSG00000143641.9 GALNT2 chr1 230057990 230282124 + protein_coding KNOWN OTTHUMG00000037771.1 224135 7743 33 ENSG00000222999.1 AC105247.1 chr18 23136435 23136512 - miRNA NOVEL NA 78 78 1 ENSG00000134490.12 TMEM241 chr18 23197144 23437961 - protein_coding KNOWN OTTHUMG00000131771.6 240818 5193 165 ENSG00000266495.1 RP11-17J14.2 chr18 23257164 23260354 - antisense NOVEL OTTHUMG00000179210.1 3191 389 2 ENSG00000101782.13 RIOK3 chr18 23452823 23486603 + protein_coding KNOWN OTTHUMG00000131813.5 33781 5320 76 ENSG00000199357.1 Y_RNA chr18 23456371 23456467 + misc_RNA NOVEL NA 97 97 1 ENSG00000141452.8 C18orf8 chr18 23503470 23531807 + protein_coding KNOWN OTTHUMG00000179239.4 28338 3090 136 ENSG00000141458.11 NPC1 chr18 23506184 23586898 - protein_coding KNOWN OTTHUMG00000131873.9 80715 10102 88 ENSG00000199366.1 Y_RNA chr18 23582016 23582121 - misc_RNA NOVEL NA 106 106 1 ENSG00000154065.15 ANKRD29 chr18 23598926 23662885 - protein_coding KNOWN OTTHUMG00000131875.4 63960 6391 44 ENSG00000267752.1 RPS10P27 chr18 23672253 23672748 - processed_pseudogene KNOWN OTTHUMG00000158182.2 496 496 1 ENSG00000227006.1 RP5-956O18.2 chr1 230258694 230268483 - antisense NOVEL OTTHUMG00000037755.1 9790 861 3 ENSG00000053747.14 LAMA3 chr18 23689443 23955066 + protein_coding KNOWN OTTHUMG00000131874.8 265624 13522 313 ENSG00000267301.1 RPL23AP77 chr18 23709825 23710287 - processed_pseudogene KNOWN OTTHUMG00000158183.2 463 463 1 ENSG00000221389.1 AC010754.1 chr18 23894115 23894206 - miRNA NOVEL NA 92 92 1 ENSG00000265752.2 RP11-403A21.1 chr18 23957754 23982556 - lincRNA NOVEL OTTHUMG00000179402.2 24803 1061 2 ENSG00000168234.11 TTC39C chr18 23992773 24135610 + protein_coding KNOWN OTTHUMG00000179403.4 142838 7188 59 ENSG00000264745.1 TTC39C-AS1 chr18 23994213 24015339 - antisense NOVEL OTTHUMG00000179404.1 21127 817 6 ENSG00000265204.1 RP11-403A21.3 chr18 24076794 24099320 - antisense NOVEL OTTHUMG00000179405.1 22527 564 2 ENSG00000264924.1 RP11-799B12.2 chr18 24113637 24121003 - antisense NOVEL OTTHUMG00000179406.1 7367 507 2 ENSG00000206863.1 RNU5A-6P chr18 24124170 24124285 - snRNA KNOWN NA 116 116 1 ENSG00000279332.1 RP11-799B12.1 chr18 24135468 24135829 - TEC KNOWN OTTHUMG00000177522.1 362 362 1 ENSG00000224407.1 RP5-956O18.3 chr1 230280312 230281893 - antisense NOVEL OTTHUMG00000037756.1 1582 1029 2 ENSG00000154040.19 CABYR chr18 24138956 24161603 + protein_coding KNOWN OTTHUMG00000037365.9 22648 3518 84 ENSG00000265750.1 RP11-799B12.4 chr18 24159509 24162211 - lincRNA NOVEL OTTHUMG00000190257.1 2703 735 3 ENSG00000141447.15 OSBPL1A chr18 24162044 24397880 - protein_coding KNOWN OTTHUMG00000131944.6 235837 8022 140 ENSG00000199874.1 RNA5SP452 chr18 24170505 24170623 - rRNA KNOWN NA 119 119 1 ENSG00000273524.1 Metazoa_SRP chr18 24179038 24179295 - misc_RNA NOVEL NA 258 258 1 ENSG00000206766.1 RNU6-435P chr18 24218300 24218404 + snRNA KNOWN NA 105 105 1 ENSG00000212051.1 MIR320C2 chr18 24321686 24321735 + miRNA KNOWN NA 50 50 1 ENSG00000264365.1 RP11-621L6.2 chr18 24364787 24367984 + antisense NOVEL OTTHUMG00000179461.1 3198 567 2 ENSG00000273321.1 RP11-621L6.3 chr18 24402153 24402714 + lincRNA NOVEL OTTHUMG00000186241.1 562 562 1 ENSG00000154059.8 IMPACT chr18 24426616 24453535 + protein_coding KNOWN OTTHUMG00000131943.3 26920 4918 42 ENSG00000177614.8 PGBD5 chr1 230314482 230425729 - protein_coding KNOWN OTTHUMG00000037759.4 111248 10662 18 ENSG00000199636.1 Y_RNA chr18 24429505 24429609 + misc_RNA NOVEL NA 105 105 1 ENSG00000265094.1 RP11-178F10.1 chr18 24435364 24439638 + sense_intronic NOVEL OTTHUMG00000179477.1 4275 281 2 ENSG00000134489.6 HRH4 chr18 24460629 24479957 + protein_coding KNOWN OTTHUMG00000131945.2 19329 3668 5 ENSG00000264695.1 RP11-178F10.2 chr18 24489375 24491080 + lincRNA NOVEL OTTHUMG00000179488.1 1706 459 2 ENSG00000266489.1 RP11-178F10.3 chr18 24516883 24518006 - lincRNA NOVEL OTTHUMG00000179489.1 1124 543 2 ENSG00000266181.1 EIF4A3P1 chr18 24522273 24522919 - processed_pseudogene KNOWN OTTHUMG00000179490.1 647 647 1 ENSG00000265485.4 RP11-449D8.1 chr18 24628182 24662198 + lincRNA NOVEL OTTHUMG00000179501.1 34017 2471 6 ENSG00000263553.1 RP11-449D8.2 chr18 24673163 24674348 + lincRNA NOVEL OTTHUMG00000179502.1 1186 577 2 ENSG00000266520.1 RAC1P1 chr18 24685772 24686351 - processed_pseudogene KNOWN OTTHUMG00000179504.1 580 580 1 ENSG00000266809.1 RP11-449D8.3 chr18 24689914 24690161 - processed_pseudogene KNOWN OTTHUMG00000179505.1 248 248 1 ENSG00000232964.2 RP11-543E8.1 chr1 230592660 230595583 - lincRNA NOVEL OTTHUMG00000037760.2 2924 403 2 ENSG00000266573.4 RP11-449D8.5 chr18 24725781 24929076 + lincRNA NOVEL OTTHUMG00000179506.1 203296 908 10 ENSG00000264345.1 RP11-958F21.1 chr18 24933487 24987682 - lincRNA NOVEL OTTHUMG00000179507.1 54196 564 4 ENSG00000229248.1 WBP2P1 chr18 25016434 25017204 - processed_pseudogene KNOWN OTTHUMG00000179508.1 771 771 1 ENSG00000265552.1 RP11-958F21.3 chr18 25055600 25056760 + lincRNA NOVEL OTTHUMG00000179509.1 1161 663 2 ENSG00000198795.9 ZNF521 chr18 25061926 25352190 - protein_coding KNOWN OTTHUMG00000179511.2 290265 6223 65 ENSG00000279439.1 CTD-2576N18.1 chr18 25200976 25202837 - TEC KNOWN OTTHUMG00000179534.1 1862 1862 1 ENSG00000264434.2 CTD-2006O16.2 chr18 25302126 25302960 + antisense NOVEL OTTHUMG00000179535.3 835 468 2 ENSG00000242216.3 RN7SL97P chr18 25818234 25818532 - misc_RNA KNOWN NA 299 299 1 ENSG00000264193.1 RP11-737G21.1 chr18 25953216 25953468 - processed_pseudogene KNOWN OTTHUMG00000179446.1 253 253 1 ENSG00000141380.12 SS18 chr18 26016253 26091217 - protein_coding KNOWN OTTHUMG00000179425.2 74965 6144 162 ENSG00000235817.2 RP11-543E8.2 chr1 230612009 230612412 - processed_pseudogene KNOWN OTTHUMG00000037761.2 404 404 1 ENSG00000243925.1 RPS24P18 chr18 26098839 26099226 + processed_pseudogene KNOWN OTTHUMG00000158184.1 388 388 1 ENSG00000154611.13 PSMA8 chr18 26133852 26193355 + protein_coding KNOWN OTTHUMG00000179426.1 59504 1894 36 ENSG00000188985.6 DHFRP1 chr18 26170726 26171284 - processed_pseudogene KNOWN OTTHUMG00000179427.2 559 559 1 ENSG00000266227.1 NPM1P2 chr18 26204869 26205904 + processed_pseudogene KNOWN OTTHUMG00000179428.2 1036 867 3 ENSG00000141384.10 TAF4B chr18 26225936 26391685 + protein_coding KNOWN OTTHUMG00000179429.3 165750 5395 63 ENSG00000263829.1 FAM60BP chr18 26255698 26256355 - processed_pseudogene KNOWN OTTHUMG00000179430.1 658 658 1 ENSG00000266237.1 RP11-25D3.1 chr18 26266009 26267409 + sense_intronic NOVEL OTTHUMG00000179431.1 1401 839 2 ENSG00000264911.1 RP11-107K17.2 chr18 26348347 26349004 + processed_pseudogene KNOWN OTTHUMG00000179432.1 658 658 1 ENSG00000207160.1 RNU6-1289P chr18 26366301 26366406 - snRNA KNOWN NA 106 106 1 ENSG00000263862.1 LINC01543 chr18 26422995 26426101 + lincRNA NOVEL OTTHUMG00000179433.1 3107 900 3 ENSG00000135775.12 COG2 chr1 230642489 230693982 + protein_coding KNOWN OTTHUMG00000037753.2 51494 10938 95 ENSG00000134504.11 KCTD1 chr18 26454910 26657401 - protein_coding KNOWN OTTHUMG00000131947.4 202492 7410 46 ENSG00000277534.1 RP11-9E17.1 chr18 26542971 26545791 - sense_intronic NOVEL OTTHUMG00000186526.1 2821 2821 1 ENSG00000275805.1 RP11-349H17.2 chr18 26565723 26575626 - sense_intronic NOVEL OTTHUMG00000186527.1 9904 1678 2 ENSG00000252846.1 AC090206.1 chr18 26586714 26586798 - miRNA NOVEL NA 85 85 1 ENSG00000276221.1 MIR8057 chr18 26591467 26591535 - miRNA KNOWN NA 69 69 1 ENSG00000263846.1 CIAPIN1P chr18 26599408 26600338 + processed_pseudogene KNOWN OTTHUMG00000179434.1 931 931 1 ENSG00000260372.5 AQP4-AS1 chr18 26655742 27190698 + antisense KNOWN OTTHUMG00000131954.6 534957 6944 40 ENSG00000265369.3 PCAT18 chr18 26687621 26703638 - lincRNA NOVEL OTTHUMG00000179450.1 16018 2598 2 ENSG00000263677.1 RP11-17A19.2 chr18 26688111 26689668 + lincRNA NOVEL OTTHUMG00000179531.1 1558 358 2 ENSG00000275900.1 U3 chr18 26689316 26689529 - snoRNA NOVEL NA 214 214 1 ENSG00000135744.7 AGT chr1 230702523 230714297 - protein_coding KNOWN OTTHUMG00000037757.1 11775 2291 5 ENSG00000263382.1 RP11-552O4.1 chr18 26822813 26823979 - lincRNA NOVEL OTTHUMG00000179525.1 1167 640 2 ENSG00000266184.1 RP11-552O4.2 chr18 26831520 26832432 - processed_pseudogene KNOWN OTTHUMG00000179526.1 913 913 1 ENSG00000171885.12 AQP4 chr18 26852038 26865818 - protein_coding KNOWN OTTHUMG00000131955.6 13781 5995 32 ENSG00000154080.11 CHST9 chr18 26906481 27185317 - protein_coding KNOWN OTTHUMG00000179469.4 278837 11522 19 ENSG00000266549.1 RP11-526I8.2 chr18 26952201 26952558 - processed_pseudogene KNOWN OTTHUMG00000179527.1 358 358 1 ENSG00000265374.1 RP11-57J16.1 chr18 27225742 27247188 + lincRNA NOVEL OTTHUMG00000179451.1 21447 555 5 ENSG00000264151.4 RP11-739N10.1 chr18 27336379 27595164 - lincRNA NOVEL OTTHUMG00000179579.1 258786 2557 18 ENSG00000264790.1 RP11-26N15.2 chr18 27343252 27346110 + lincRNA NOVEL OTTHUMG00000179582.1 2859 922 3 ENSG00000244329.1 UBA52P9 chr18 27355406 27355764 - processed_pseudogene KNOWN OTTHUMG00000158402.2 359 359 1 ENSG00000263611.1 RP11-612A1.1 chr18 27397952 27401904 + lincRNA NOVEL OTTHUMG00000179583.1 3953 439 2 ENSG00000244137.1 RP11-99J16__A.2 chr1 230710698 230795492 - antisense NOVEL OTTHUMG00000037778.1 84795 1345 7 ENSG00000265097.1 RBM22P1 chr18 27418884 27420435 - processed_pseudogene KNOWN OTTHUMG00000179592.1 1552 1214 2 ENSG00000263405.1 PA2G4P3 chr18 27452514 27453657 - processed_pseudogene KNOWN OTTHUMG00000179591.1 1144 1144 1 ENSG00000280492.1 AC068408.1 chr18 27452623 27452712 - miRNA NOVEL NA 90 90 1 ENSG00000170558.7 CDH2 chr18 27950966 28177446 - protein_coding KNOWN OTTHUMG00000059940.10 226481 4950 44 ENSG00000227279.1 AC015933.2 chr18 27954519 27963687 + antisense NOVEL OTTHUMG00000064910.1 9169 440 3 ENSG00000274578.1 RP11-430E17.1 chr18 28146233 28146703 - sense_intronic NOVEL OTTHUMG00000186528.1 471 471 1 ENSG00000266296.1 ARIH2P1 chr18 28651732 28653208 + processed_pseudogene KNOWN OTTHUMG00000179464.1 1477 1477 1 ENSG00000265994.1 RP11-510D21.1 chr18 28785068 28789260 + lincRNA NOVEL OTTHUMG00000179465.1 4193 429 2 ENSG00000271238.1 RP11-510D21.2 chr18 28824652 28824826 - processed_pseudogene KNOWN OTTHUMG00000185007.1 175 175 1 ENSG00000251719.1 RNU6-408P chr18 29048620 29048719 + snRNA KNOWN NA 100 100 1 ENSG00000135773.11 CAPN9 chr1 230747384 230802003 + protein_coding KNOWN OTTHUMG00000037779.1 54620 2593 62 ENSG00000265730.1 AC090349.1 chr18 29095575 29095679 - miRNA NOVEL NA 105 105 1 ENSG00000212085.3 AC105245.1 chr18 29196441 29196527 + miRNA NOVEL NA 87 87 1 ENSG00000266479.1 CTD-2515C13.1 chr18 29256817 29257060 - processed_pseudogene KNOWN OTTHUMG00000179467.1 244 244 1 ENSG00000265980.1 CTD-2515C13.2 chr18 29278509 29361963 - lincRNA NOVEL OTTHUMG00000179468.1 83455 471 3 ENSG00000221731.1 AC091321.1 chr18 29483328 29483423 + miRNA NOVEL NA 96 96 1 ENSG00000264587.4 RP11-784B15.1 chr18 29518259 29548241 + lincRNA NOVEL OTTHUMG00000179470.1 29983 986 11 ENSG00000274900.1 AC013660.1 chr18 29928555 29928708 + miRNA NOVEL NA 154 154 1 ENSG00000266196.1 RP11-675P14.1 chr18 30713275 30714286 + lincRNA NOVEL OTTHUMG00000179471.1 1012 572 2 ENSG00000279734.1 RP11-675P14.2 chr18 30780006 30780424 + TEC KNOWN OTTHUMG00000179472.1 419 419 1 ENSG00000265670.1 RP11-25I11.1 chr18 30954820 30980917 - lincRNA NOVEL OTTHUMG00000179621.1 26098 387 3 ENSG00000274890.1 MIR1302-9 chr1 30366 30503 + miRNA KNOWN NA 138 138 1 ENSG00000273547.1 OR4F16 chr1 685716 686654 - protein_coding KNOWN OTTHUMG00000002581.1 939 939 1 ENSG00000132906.16 CASP9 chr1 15490832 15526534 - protein_coding KNOWN OTTHUMG00000002256.5 35703 5269 72 ENSG00000202063.1 RNA5SP79 chr1 230820250 230820358 + rRNA KNOWN NA 109 109 1 ENSG00000251702.1 RNU6-857P chr18 30984106 30984215 + snRNA KNOWN NA 110 110 1 ENSG00000134762.15 DSC3 chr18 30990008 31042815 - protein_coding KNOWN OTTHUMG00000179622.1 52808 7056 39 ENSG00000134755.13 DSC2 chr18 31058840 31102415 - protein_coding KNOWN OTTHUMG00000131981.4 43576 12371 33 ENSG00000265888.1 DSCAS chr18 31101588 31162789 + antisense NOVEL OTTHUMG00000179623.1 61202 553 4 ENSG00000134765.8 DSC1 chr18 31129236 31162856 - protein_coding KNOWN OTTHUMG00000131982.1 33621 4271 33 ENSG00000263698.1 RP11-408H20.3 chr18 31131456 31132494 + antisense NOVEL OTTHUMG00000179624.1 1039 1039 1 ENSG00000134760.5 DSG1 chr18 31318089 31357029 + protein_coding KNOWN OTTHUMG00000131983.4 38941 5252 19 ENSG00000266729.4 DSG1-AS1 chr18 31343368 31426988 - antisense NOVEL OTTHUMG00000179625.2 83621 1149 15 ENSG00000207019.1 RNU6-167P chr18 31345362 31345467 - snRNA KNOWN NA 106 106 1 ENSG00000175065.10 DSG4 chr18 31376777 31414912 + protein_coding KNOWN OTTHUMG00000131979.2 38136 4696 31 ENSG00000225656.1 RP5-858B6.1 chr1 230823641 230824707 - lincRNA NOVEL OTTHUMG00000037789.1 1067 311 2 ENSG00000207240.1 Y_RNA chr18 31382317 31382430 + misc_RNA NOVEL NA 114 114 1 ENSG00000134757.4 DSG3 chr18 31447795 31478702 + protein_coding KNOWN OTTHUMG00000131985.3 30908 5525 16 ENSG00000266521.1 RP11-650P15.1 chr18 31496645 31497195 - lincRNA NOVEL OTTHUMG00000179648.1 551 433 2 ENSG00000046604.11 DSG2 chr18 31498043 31549008 + protein_coding KNOWN OTTHUMG00000179649.2 50966 6190 21 ENSG00000264859.4 DSG2-AS1 chr18 31542146 31556911 - antisense NOVEL OTTHUMG00000179650.1 14766 2024 10 ENSG00000118271.8 TTR chr18 31591726 31599021 + protein_coding KNOWN OTTHUMG00000131984.2 7296 2173 22 ENSG00000118276.10 B4GALT6 chr18 31622247 31685836 - protein_coding KNOWN OTTHUMG00000131980.3 63590 5306 33 ENSG00000259985.1 RP11-549B18.1 chr18 31685655 31686823 + antisense NOVEL OTTHUMG00000176154.1 1169 1169 1 ENSG00000200472.1 RN7SKP44 chr18 31718893 31719208 + misc_RNA KNOWN NA 316 316 1 ENSG00000265158.1 LRRC37A7P chr18 31724198 31726956 + transcribed_processed_pseudogene KNOWN OTTHUMG00000179653.1 2759 2759 3 ENSG00000119280.15 C1orf198 chr1 230837119 230869589 - protein_coding KNOWN OTTHUMG00000037790.2 32471 5161 26 ENSG00000263772.1 RP11-549B18.3 chr18 31726043 31726397 - processed_pseudogene KNOWN OTTHUMG00000179654.1 355 355 1 ENSG00000141437.8 SLC25A52 chr18 31759562 31760880 - protein_coding KNOWN OTTHUMG00000179617.2 1319 1319 1 ENSG00000153339.12 TRAPPC8 chr18 31829173 31953136 - protein_coding KNOWN OTTHUMG00000132267.7 123964 9214 129 ENSG00000263924.1 RP11-210K20.2 chr18 31844388 31845178 + antisense NOVEL OTTHUMG00000179803.1 791 348 2 ENSG00000270518.1 RP11-210K20.3 chr18 31882620 31882902 + processed_pseudogene KNOWN OTTHUMG00000184856.1 283 283 1 ENSG00000276486.1 RP11-210K20.6 chr18 31883288 31883728 + processed_pseudogene KNOWN OTTHUMG00000187944.1 441 441 1 ENSG00000270879.1 RP11-210K20.4 chr18 31884858 31885143 + processed_pseudogene KNOWN OTTHUMG00000184857.1 286 286 1 ENSG00000276282.1 RP11-210K20.5 chr18 31895745 31896410 - sense_intronic NOVEL OTTHUMG00000186531.1 666 666 1 ENSG00000222320.1 RNU6-1050P chr18 31937533 31937639 + snRNA KNOWN NA 107 107 1 ENSG00000263823.1 RP11-326K13.4 chr18 31942575 31944156 + antisense NOVEL OTTHUMG00000179804.1 1582 1582 1 ENSG00000223393.1 RP5-858B6.3 chr1 230874846 230879015 + antisense NOVEL OTTHUMG00000037791.1 4170 794 3 ENSG00000265273.1 PGDP1 chr18 31962178 31963618 + processed_pseudogene KNOWN OTTHUMG00000179618.1 1441 1441 1 ENSG00000266105.1 RP11-326K13.2 chr18 31966960 31967545 + processed_pseudogene KNOWN OTTHUMG00000179619.1 586 586 1 ENSG00000280380.1 RP11-326K13.3 chr18 31982899 31986087 + TEC KNOWN OTTHUMG00000179620.1 3189 3189 1 ENSG00000101695.7 RNF125 chr18 32018372 32073213 + protein_coding KNOWN OTTHUMG00000132266.3 54842 6508 21 ENSG00000263917.1 RP11-53I6.2 chr18 32018829 32111779 + processed_transcript NOVEL OTTHUMG00000179703.1 92951 565 5 ENSG00000274275.1 RP11-326K13.5 chr18 32031035 32031359 + sense_intronic NOVEL OTTHUMG00000186532.1 325 325 1 ENSG00000265063.1 AC009831.1 chr18 32060905 32060989 - miRNA NOVEL NA 85 85 1 ENSG00000214917.3 RP11-53I6.1 chr18 32075885 32076272 - processed_pseudogene KNOWN OTTHUMG00000158188.1 388 388 1 ENSG00000265008.1 RP11-53I6.3 chr18 32091295 32092119 - antisense NOVEL OTTHUMG00000179704.1 825 473 2 ENSG00000134758.12 RNF138 chr18 32091855 32131561 + protein_coding KNOWN OTTHUMG00000132265.2 39707 3795 36 ENSG00000240502.2 RN7SL837P chr1 230894141 230894427 + misc_RNA KNOWN NA 287 287 1 ENSG00000263393.1 RP11-53I6.4 chr18 32122400 32124478 - antisense NOVEL OTTHUMG00000179707.1 2079 553 2 ENSG00000141441.14 GAREM chr18 32124877 32470484 - protein_coding KNOWN OTTHUMG00000132273.4 345608 7568 18 ENSG00000199373.1 RNA5SP453 chr18 32176050 32176168 - rRNA KNOWN NA 119 119 1 ENSG00000141434.10 MEP1B chr18 32185069 32220404 + protein_coding KNOWN OTTHUMG00000179708.3 35336 2583 43 ENSG00000265279.1 RP11-53I6.5 chr18 32196026 32196966 - processed_pseudogene KNOWN OTTHUMG00000179734.1 941 941 1 ENSG00000263904.1 RP11-344B2.3 chr18 32245946 32249032 - sense_intronic NOVEL OTTHUMG00000179791.1 3087 468 2 ENSG00000222395.2 Y_RNA chr18 32263135 32263234 - misc_RNA NOVEL NA 100 100 1 ENSG00000264982.1 RP11-344B2.2 chr18 32287437 32290340 + antisense NOVEL OTTHUMG00000179742.1 2904 772 2 ENSG00000262477.1 AC021224.1 chr18 32412182 32413236 + lincRNA NOVEL NA 1055 857 2 ENSG00000215492.6 HNRNPA1P7 chr18 32412214 32413176 - processed_pseudogene KNOWN OTTHUMG00000163726.1 963 963 1 ENSG00000143643.11 TTC13 chr1 230906243 230978875 - protein_coding KNOWN OTTHUMG00000037788.3 72633 4212 81 ENSG00000260389.1 WBP11P1 chr18 32511663 32514634 + transcribed_processed_pseudogene KNOWN OTTHUMG00000177061.1 2972 2972 2 ENSG00000221621.1 AC009835.1 chr18 32526142 32526222 + miRNA NOVEL NA 81 81 1 ENSG00000263688.1 RP11-386P4.1 chr18 32581528 32582828 + lincRNA NOVEL OTTHUMG00000179806.1 1301 264 2 ENSG00000197705.8 KLHL14 chr18 32672671 32773062 - protein_coding KNOWN OTTHUMG00000179819.1 100392 4992 15 ENSG00000228835.1 AC012123.1 chr18 32769795 32774413 + antisense NOVEL OTTHUMG00000154695.2 4619 1661 4 ENSG00000243355.1 RP11-57G22.1 chr18 32779039 32779286 + processed_pseudogene KNOWN OTTHUMG00000158215.1 248 248 1 ENSG00000263765.4 RP11-746B8.1 chr18 32833454 32938316 + antisense NOVEL OTTHUMG00000179835.3 104863 1748 14 ENSG00000166960.15 CCDC178 chr18 32937402 33441101 - protein_coding KNOWN OTTHUMG00000132279.6 503700 4475 175 ENSG00000263450.1 RP11-680N20.1 chr18 32954075 32957998 + antisense NOVEL OTTHUMG00000179834.1 3924 558 4 ENSG00000267642.1 RP11-258B16.1 chr18 33552123 33578187 - lincRNA NOVEL OTTHUMG00000176156.1 26065 2492 2 ENSG00000173409.12 ARV1 chr1 230978981 231000595 + protein_coding KNOWN OTTHUMG00000037837.6 21615 1987 38 ENSG00000141431.8 ASXL3 chr18 33578615 33751192 + protein_coding KNOWN OTTHUMG00000178395.6 172578 12546 100 ENSG00000101746.14 NOL4 chr18 33851100 34224952 - protein_coding KNOWN OTTHUMG00000132291.4 373853 5687 91 ENSG00000199204.1 Y_RNA chr18 34001698 34001799 - misc_RNA NOVEL NA 102 102 1 ENSG00000280406.1 RP11-379L18.2 chr18 34221007 34221603 - TEC KNOWN OTTHUMG00000178471.1 597 597 1 ENSG00000267746.1 RP11-379L18.1 chr18 34222965 34224761 + antisense NOVEL OTTHUMG00000178472.1 1797 507 2 ENSG00000278052.1 RP11-379L18.3 chr18 34225930 34226429 + lincRNA NOVEL OTTHUMG00000186533.1 500 500 1 ENSG00000134769.20 DTNA chr18 34493290 34891844 + protein_coding KNOWN OTTHUMG00000132309.5 398555 12634 380 ENSG00000267585.1 RP11-115P21.1 chr18 34573987 34574523 - processed_pseudogene KNOWN OTTHUMG00000158233.3 537 537 1 ENSG00000268873.1 RP11-138H11.1 chr18 34737795 34767663 - antisense NOVEL OTTHUMG00000182437.1 29869 577 5 ENSG00000221409.1 AC068506.1 chr18 34819946 34820031 - miRNA NOVEL NA 86 86 1 ENSG00000252131.1 AL844165.1 chr1 230988989 230989123 - miRNA NOVEL NA 135 135 1 ENSG00000278464.1 RP11-96A15.1 chr18 34892013 34902885 - lincRNA NOVEL OTTHUMG00000186536.1 10873 670 5 ENSG00000166974.11 MAPRE2 chr18 34976928 35143470 + protein_coding KNOWN OTTHUMG00000132551.8 166543 6180 70 ENSG00000280096.1 RP11-294N21.2 chr18 35082009 35082242 + TEC KNOWN OTTHUMG00000182418.1 234 234 1 ENSG00000274400.1 RP11-294N21.3 chr18 35144942 35145417 + lincRNA NOVEL OTTHUMG00000186537.1 476 476 1 ENSG00000186812.11 ZNF397 chr18 35241030 35267133 + protein_coding KNOWN OTTHUMG00000178532.5 26104 8710 40 ENSG00000186814.11 ZSCAN30 chr18 35251058 35290245 - protein_coding KNOWN OTTHUMG00000178569.4 39188 8010 31 ENSG00000279989.1 RP11-158H5.2 chr18 35257040 35257512 + TEC KNOWN OTTHUMG00000178534.1 473 473 1 ENSG00000274184.1 RP11-158H5.8 chr18 35268218 35270238 + lincRNA NOVEL OTTHUMG00000186540.1 2021 2021 1 ENSG00000268573.1 RP11-158H5.7 chr18 35280867 35290201 - lincRNA NOVEL OTTHUMG00000182438.1 9335 4382 2 ENSG00000257267.2 ZNF271P chr18 35290282 35310766 + unitary_pseudogene KNOWN OTTHUMG00000132563.2 20485 5124 5 ENSG00000182118.5 FAM89A chr1 231018958 231040246 - protein_coding KNOWN OTTHUMG00000037960.2 21289 2394 7 ENSG00000274918.1 RP11-54G14.1 chr18 35317396 35317848 + lincRNA NOVEL OTTHUMG00000186541.1 453 453 1 ENSG00000172466.14 ZNF24 chr18 35332212 35345482 - protein_coding KNOWN OTTHUMG00000132565.3 13271 8257 18 ENSG00000186496.9 ZNF396 chr18 35366697 35377337 - protein_coding KNOWN OTTHUMG00000132562.4 10641 6052 19 ENSG00000239683.1 RP11-322E11.1 chr18 35383354 35384025 - processed_pseudogene KNOWN OTTHUMG00000158234.1 672 672 1 ENSG00000275512.1 RP11-322E11.2 chr18 35403996 35406528 - lincRNA NOVEL OTTHUMG00000178602.2 2533 2533 1 ENSG00000267583.4 RP11-322E11.5 chr18 35443869 35467088 - lincRNA NOVEL OTTHUMG00000178686.1 23220 916 9 ENSG00000267140.1 RP11-322E11.6 chr18 35443871 35497940 - protein_coding PUTATIVE OTTHUMG00000178687.1 54070 455 3 ENSG00000153391.14 INO80C chr18 35452230 35497991 - protein_coding KNOWN OTTHUMG00000132564.4 45762 5085 46 ENSG00000277489.1 AC007998.1 chr18 35466938 35466991 - miRNA NOVEL NA 54 54 1 ENSG00000279074.1 RP11-322E11.3 chr18 35483431 35483667 - TEC KNOWN OTTHUMG00000178667.1 237 237 1 ENSG00000221290.1 MIR1182 chr1 231019828 231019924 - miRNA KNOWN NA 97 97 1 ENSG00000141429.12 GALNT1 chr18 35581117 35711834 + protein_coding KNOWN OTTHUMG00000132567.4 130718 5126 42 ENSG00000266965.1 RP11-712P20.2 chr18 35595901 35597599 + sense_intronic NOVEL OTTHUMG00000178766.1 1699 1699 1 ENSG00000267397.1 RP11-873E20.1 chr18 35716370 35717978 + lincRNA NOVEL OTTHUMG00000176165.1 1609 1609 1 ENSG00000267797.1 NRBF2P1 chr18 35841759 35842617 + processed_pseudogene KNOWN OTTHUMG00000178768.1 859 859 1 ENSG00000207797.1 MIR187 chr18 35904818 35904926 - miRNA KNOWN NA 109 109 1 ENSG00000265641.1 MIR3929 chr18 35934088 35934142 - miRNA KNOWN NA 55 55 1 ENSG00000267627.4 RP11-905K4.1 chr18 35951803 35966118 - lincRNA NOVEL OTTHUMG00000178978.1 14316 731 5 ENSG00000141428.15 C18orf21 chr18 35972083 35979286 + protein_coding KNOWN OTTHUMG00000128531.3 7204 2158 29 ENSG00000278986.1 RP11-723J4.3 chr18 35972151 35973916 + TEC KNOWN OTTHUMG00000178964.1 1766 1766 1 ENSG00000141425.16 RPRD1A chr18 35984387 36067576 - protein_coding KNOWN OTTHUMG00000132591.6 83190 8442 60 ENSG00000116138.11 DNAJC16 chr1 15526813 15592379 + protein_coding KNOWN OTTHUMG00000002358.3 65567 8563 97 ENSG00000227934.1 RP11-423F24.3 chr1 231021611 231022183 + processed_pseudogene KNOWN OTTHUMG00000037961.1 573 573 1 ENSG00000141424.11 SLC39A6 chr18 36108532 36129385 - protein_coding KNOWN OTTHUMG00000178965.2 20854 3682 33 ENSG00000134759.12 ELP2 chr18 36129444 36180556 + protein_coding KNOWN OTTHUMG00000132589.4 51113 11068 253 ENSG00000260552.1 RP11-49I11.1 chr18 36179996 36187448 - antisense NOVEL OTTHUMG00000176168.1 7453 609 2 ENSG00000075643.5 MOCOS chr18 36187519 36272157 + protein_coding KNOWN OTTHUMG00000132590.2 84639 6281 18 ENSG00000274849.1 RP11-49I11.4 chr18 36189824 36190272 + sense_intronic NOVEL OTTHUMG00000186542.1 449 449 1 ENSG00000267404.1 RP11-49I11.2 chr18 36273574 36274599 + processed_pseudogene KNOWN OTTHUMG00000178967.1 1026 1026 1 ENSG00000267456.2 RP11-49I11.3 chr18 36278735 36279119 - processed_pseudogene KNOWN OTTHUMG00000178974.2 385 385 1 ENSG00000134775.14 FHOD3 chr18 36297714 36780055 + protein_coding KNOWN OTTHUMG00000182381.4 482342 7965 148 ENSG00000134779.13 TPGS2 chr18 36777647 36829216 - protein_coding KNOWN OTTHUMG00000178075.6 51570 10571 110 ENSG00000150477.13 KIAA1328 chr18 36829106 37232172 + protein_coding KNOWN OTTHUMG00000178087.6 403067 11127 78 ENSG00000229595.1 RP5-1097F14.1 chr1 231117831 231118325 - processed_pseudogene KNOWN OTTHUMG00000037957.1 495 495 1 ENSG00000267039.1 RP11-58G13.1 chr18 36901946 36923814 - antisense NOVEL OTTHUMG00000178088.1 21869 688 4 ENSG00000267651.1 RP11-95O2.1 chr18 37234119 37236242 - lincRNA NOVEL OTTHUMG00000176170.2 2124 2124 1 ENSG00000101489.17 CELF4 chr18 37243047 37566037 - protein_coding KNOWN OTTHUMG00000178178.4 322991 6532 177 ENSG00000267707.2 RP11-95O2.5 chr18 37243776 37247506 + antisense NOVEL OTTHUMG00000178180.2 3731 701 2 ENSG00000267202.4 RP11-797E24.3 chr18 37273706 37276572 + antisense NOVEL OTTHUMG00000178182.1 2867 810 8 ENSG00000279678.1 RP11-797E24.1 chr18 37305295 37306333 - TEC KNOWN OTTHUMG00000178183.1 1039 1039 1 ENSG00000279543.1 RP11-1147P1.1 chr18 37473330 37473977 - TEC KNOWN OTTHUMG00000178185.1 648 648 1 ENSG00000266530.1 MIR4318 chr18 37657135 37657215 + miRNA KNOWN NA 81 81 1 ENSG00000243516.1 RP11-19F9.1 chr18 37672689 37673176 + processed_pseudogene KNOWN OTTHUMG00000158235.1 488 488 1 ENSG00000268566.4 RP11-687D19.1 chr18 38655209 38687998 - lincRNA NOVEL OTTHUMG00000182398.2 32790 912 9 ENSG00000119283.14 TRIM67 chr1 231162112 231221556 + protein_coding KNOWN OTTHUMG00000037958.6 59445 9326 32 ENSG00000222704.1 RN7SKP182 chr18 39016047 39016344 - misc_RNA KNOWN NA 298 298 1 ENSG00000253038.1 RNU6-706P chr18 39034007 39034110 + snRNA KNOWN NA 104 104 1 ENSG00000267374.1 RP11-244M2.1 chr18 39206924 39800318 - lincRNA NOVEL OTTHUMG00000178312.1 593395 2782 8 ENSG00000175886.10 RPL7AP66 chr18 39334872 39335672 - processed_pseudogene KNOWN OTTHUMG00000155303.2 801 801 1 ENSG00000266148.1 MIR5583-1 chr18 39676721 39676779 + miRNA KNOWN NA 59 59 1 ENSG00000212354.1 RNU6-1242P chr18 39678520 39678622 - snRNA KNOWN NA 103 103 1 ENSG00000267413.1 RP11-636O21.1 chr18 39841174 39924840 - lincRNA NOVEL OTTHUMG00000178309.1 83667 1115 5 ENSG00000279034.1 RP11-5A1.1 chr18 40062903 40066471 - TEC KNOWN OTTHUMG00000176176.1 3569 3569 1 ENSG00000261715.1 LINC01477 chr18 40066286 40099233 + lincRNA NOVEL OTTHUMG00000176177.1 32948 1226 4 ENSG00000267664.1 RPL17P45 chr18 40143926 40144504 - processed_pseudogene KNOWN OTTHUMG00000182379.1 579 509 2 ENSG00000235710.4 RP5-1097F14.3 chr1 231184098 231187627 - antisense NOVEL OTTHUMG00000037959.1 3530 1348 3 ENSG00000267313.5 KC6 chr18 41465783 41632185 - lincRNA NOVEL OTTHUMG00000178310.5 166403 5180 32 ENSG00000267652.1 RP11-188I24.1 chr18 41789162 41789395 - processed_pseudogene KNOWN OTTHUMG00000178311.1 234 234 1 ENSG00000225253.1 AC011225.1 chr18 41819053 41819421 + processed_pseudogene KNOWN OTTHUMG00000133614.1 369 369 1 ENSG00000078142.10 PIK3C3 chr18 41955206 42087830 + protein_coding KNOWN OTTHUMG00000132593.6 132625 15182 118 ENSG00000276174.1 RP11-687E1.2 chr18 42052705 42053030 + sense_intronic NOVEL OTTHUMG00000186543.1 326 326 1 ENSG00000267088.1 RP11-115N12.1 chr18 42089312 42089752 + processed_pseudogene KNOWN OTTHUMG00000178375.1 441 441 1 ENSG00000267586.5 LINC00907 chr18 42159283 42691422 + lincRNA NOVEL OTTHUMG00000178321.4 532140 9813 63 ENSG00000253040.1 RNA5SP454 chr18 42270589 42270715 + rRNA KNOWN NA 127 127 1 ENSG00000152214.11 RIT2 chr18 42743227 43115691 - protein_coding KNOWN OTTHUMG00000132611.4 372465 1425 19 ENSG00000132872.10 SYT4 chr18 43267878 43277650 - protein_coding KNOWN OTTHUMG00000132610.4 9773 4437 25 ENSG00000143633.11 C1orf131 chr1 231223763 231241187 - protein_coding KNOWN OTTHUMG00000038023.3 17425 5413 39 ENSG00000278933.1 RP11-789C7.1 chr18 43499173 43499836 + TEC KNOWN OTTHUMG00000178350.1 664 664 1 ENSG00000202250.1 RNU6-443P chr18 43832159 43832265 - snRNA KNOWN NA 107 107 1 ENSG00000267716.1 AC083760.1 chr18 44039471 44040140 + processed_pseudogene KNOWN OTTHUMG00000178345.1 670 670 1 ENSG00000202060.1 RNA5SP455 chr18 44071583 44071701 + rRNA KNOWN NA 119 119 1 ENSG00000267573.1 KRT8P5 chr18 44320800 44322257 - processed_pseudogene KNOWN OTTHUMG00000178346.1 1458 1458 1 ENSG00000267337.1 LINC01478 chr18 44323436 44531697 - lincRNA NOVEL OTTHUMG00000178347.2 208262 2267 9 ENSG00000277899.1 MLECP1 chr18 44522366 44523074 + processed_pseudogene KNOWN OTTHUMG00000187945.1 709 709 1 ENSG00000267414.1 RP11-456K23.1 chr18 44676927 44679717 - lincRNA NOVEL OTTHUMG00000176180.1 2791 2065 2 ENSG00000152217.15 SETBP1 chr18 44680173 45068510 + protein_coding KNOWN OTTHUMG00000132613.4 388338 11151 12 ENSG00000280365.1 RP11-9H20.2 chr18 44732575 44733315 + TEC KNOWN OTTHUMG00000182467.1 741 741 1 ENSG00000116906.10 GNPAT chr1 231241207 231277973 + protein_coding KNOWN OTTHUMG00000038024.1 36767 3173 43 ENSG00000265957.1 MIR4319 chr18 44970082 44970166 - miRNA KNOWN NA 85 85 1 ENSG00000279319.1 RP11-693M3.1 chr18 44986109 44989203 + TEC KNOWN OTTHUMG00000179033.1 3095 3095 1 ENSG00000267101.4 RP11-846C15.2 chr18 45130565 45181347 - antisense NOVEL OTTHUMG00000179146.1 50783 993 8 ENSG00000132874.12 SLC14A2 chr18 45212995 45683686 + protein_coding KNOWN OTTHUMG00000132616.5 470692 5409 72 ENSG00000267097.1 SLC14A2-AS1 chr18 45423764 45483218 - antisense NOVEL OTTHUMG00000179057.1 59455 1391 13 ENSG00000266988.4 RP11-749H17.1 chr18 45483345 45529855 + sense_intronic NOVEL OTTHUMG00000179041.1 46511 2607 11 ENSG00000267354.1 RP11-749H17.2 chr18 45507202 45550183 + sense_intronic NOVEL OTTHUMG00000179042.1 42982 726 4 ENSG00000266968.2 RP11-116O18.1 chr18 45646153 45647937 + sense_intronic NOVEL OTTHUMG00000179043.2 1785 1785 1 ENSG00000267193.4 RP11-116O18.3 chr18 45669367 45747215 - antisense NOVEL OTTHUMG00000179076.2 77849 731 7 ENSG00000141469.15 SLC14A1 chr18 45724127 45752520 + protein_coding KNOWN OTTHUMG00000132617.7 28394 6376 135 ENSG00000222407.1 RNA5SP80 chr1 231281414 231281524 - rRNA KNOWN NA 111 111 1 ENSG00000267558.1 RP11-618K16.4 chr18 45788530 45788667 + processed_pseudogene KNOWN OTTHUMG00000179173.1 138 138 1 ENSG00000197046.10 SIGLEC15 chr18 45825512 45844080 + protein_coding KNOWN OTTHUMG00000170870.5 18569 3598 24 ENSG00000152223.11 EPG5 chr18 45847609 45967274 - protein_coding KNOWN OTTHUMG00000132626.4 119666 13675 182 ENSG00000152229.17 PSTPIP2 chr18 45983536 46072272 - protein_coding KNOWN OTTHUMG00000152674.3 88737 4120 50 ENSG00000222179.1 RN7SKP26 chr18 45989653 45989945 - misc_RNA KNOWN NA 293 293 1 ENSG00000267293.1 RP11-8H2.1 chr18 46028306 46029829 + processed_pseudogene KNOWN OTTHUMG00000179386.1 1524 1524 1 ENSG00000252034.1 RNY4P37 chr18 46077004 46077099 - misc_RNA KNOWN NA 96 96 1 ENSG00000152234.14 ATP5A1 chr18 46080248 46104334 - protein_coding KNOWN OTTHUMG00000132637.8 24087 10908 132 ENSG00000152240.11 HAUS1 chr18 46104332 46128333 + protein_coding KNOWN OTTHUMG00000132638.4 24002 2165 74 ENSG00000251939.1 RNU6-1278P chr18 46121615 46121721 - snRNA KNOWN NA 107 107 1 ENSG00000116903.7 EXOC8 chr1 231332753 231337852 - protein_coding KNOWN OTTHUMG00000038025.2 5100 5100 1 ENSG00000152242.9 C18orf25 chr18 46173553 46266991 + protein_coding KNOWN OTTHUMG00000179190.6 93439 9576 20 ENSG00000141622.12 RNF165 chr18 46326809 46463140 + protein_coding KNOWN OTTHUMG00000179230.3 136332 11419 35 ENSG00000279829.1 RP11-63I8.1 chr18 46385707 46387083 + TEC KNOWN OTTHUMG00000179231.1 1377 1377 1 ENSG00000167210.15 LOXHD1 chr18 46476972 46657033 - protein_coding KNOWN OTTHUMG00000132644.7 180062 9020 214 ENSG00000101638.12 ST8SIA5 chr18 46667821 46759257 - protein_coding KNOWN OTTHUMG00000132643.4 91437 15789 47 ENSG00000274794.1 AC090311.1 chr18 46706446 46706558 - miRNA NOVEL NA 113 113 1 ENSG00000240983.1 RP11-742D12.1 chr18 46722975 46723223 + processed_pseudogene KNOWN OTTHUMG00000158244.1 249 249 1 ENSG00000270112.3 RP11-742D12.2 chr18 46756487 46764408 + processed_transcript NOVEL OTTHUMG00000184163.1 7922 5117 5 ENSG00000274776.1 RP11-687F6.5 chr18 46786699 46789297 - lincRNA NOVEL OTTHUMG00000186545.1 2599 2599 1 ENSG00000078043.14 PIAS2 chr18 46803224 46920160 - protein_coding KNOWN OTTHUMG00000179301.5 116937 17527 112 ENSG00000010072.14 SPRTN chr1 231337104 231355023 + protein_coding KNOWN OTTHUMG00000038022.1 17920 5906 23 ENSG00000267587.1 RP11-687F6.4 chr18 46852632 46853882 - processed_pseudogene KNOWN OTTHUMG00000179392.1 1251 621 3 ENSG00000279354.1 RP11-776B3.1 chr18 46915021 46915623 - TEC KNOWN OTTHUMG00000179320.1 603 603 1 ENSG00000167216.15 KATNAL2 chr18 46917492 47102243 + protein_coding KNOWN OTTHUMG00000179408.5 184752 4783 66 ENSG00000274744.1 TCEB3CL2 chr18 46962768 46964408 - protein_coding KNOWN OTTHUMG00000180382.1 1641 1641 1 ENSG00000275553.1 TCEB3CL chr18 46968695 47029842 - protein_coding KNOWN OTTHUMG00000188256.1 61148 1641 3 ENSG00000278674.1 RP11-49K24.9 chr18 47022287 47023927 - protein_coding NOVEL OTTHUMG00000188257.1 1641 1641 1 ENSG00000183791.4 TCEB3C chr18 47028202 47030078 - protein_coding KNOWN OTTHUMG00000132651.1 1877 1877 1 ENSG00000206181.5 TCEB3B chr18 47032572 47035621 - protein_coding KNOWN OTTHUMG00000132649.1 3050 3050 4 ENSG00000280212.1 RP11-49K24.3 chr18 47076117 47076594 + TEC KNOWN OTTHUMG00000179409.1 478 478 1 ENSG00000266957.1 RP11-49K24.4 chr18 47077361 47091280 - antisense NOVEL OTTHUMG00000179410.1 13920 200 2 ENSG00000135766.8 EGLN1 chr1 231363751 231425044 - protein_coding KNOWN OTTHUMG00000038027.1 61294 7265 10 ENSG00000267724.1 RP11-49K24.8 chr18 47105946 47108062 + antisense NOVEL OTTHUMG00000180357.1 2117 2117 1 ENSG00000167220.10 HDHD2 chr18 47107403 47150520 - protein_coding KNOWN OTTHUMG00000179411.4 43118 4704 61 ENSG00000267228.5 IER3IP1 chr18 47134656 47176281 - protein_coding NOVEL OTTHUMG00000180304.2 41626 598 12 ENSG00000267800.1 RP11-49K24.5 chr18 47137018 47137290 + processed_pseudogene KNOWN OTTHUMG00000180183.1 273 273 1 ENSG00000134049.4 IER3IP1 chr18 47152998 47176374 - protein_coding KNOWN OTTHUMG00000132650.2 23377 3525 3 ENSG00000215474.5 SKOR2 chr18 47212089 47249183 - protein_coding KNOWN OTTHUMG00000180309.2 37095 3111 16 ENSG00000201825.1 RNU6-1131P chr18 47234442 47234548 - snRNA KNOWN NA 107 107 1 ENSG00000267761.3 CTD-2130O13.1 chr18 47285725 47594550 + lincRNA NOVEL OTTHUMG00000180284.4 308826 1397 10 ENSG00000266582.1 MIR4527 chr18 47380496 47380565 + miRNA KNOWN NA 70 70 1 ENSG00000261307.1 RP11-157P23.2 chr18 47501172 47558383 + lincRNA NOVEL OTTHUMG00000176186.1 57212 545 4 ENSG00000251866.1 SCARNA21 chr1 15542165 15542304 + scaRNA NOVEL NA 140 140 1 ENSG00000223982.3 SNRPD2P2 chr1 231475956 231476288 - processed_pseudogene KNOWN OTTHUMG00000039489.1 333 333 1 ENSG00000279367.1 RP11-157P23.1 chr18 47501172 47503106 + TEC KNOWN OTTHUMG00000176184.1 1935 1935 1 ENSG00000267156.1 TPMTP1 chr18 47630112 47630848 + processed_pseudogene KNOWN OTTHUMG00000180321.1 737 737 1 ENSG00000267187.1 RP11-767C4.1 chr18 47703175 47703745 + processed_pseudogene KNOWN OTTHUMG00000180359.1 571 571 1 ENSG00000175387.14 SMAD2 chr18 47808957 47931146 - protein_coding KNOWN OTTHUMG00000132652.3 122190 36366 82 ENSG00000267541.1 RP11-380M21.2 chr18 47853233 47853457 - processed_pseudogene KNOWN OTTHUMG00000180285.1 225 225 1 ENSG00000279707.1 RP11-380M21.1 chr18 47866839 47867367 + TEC KNOWN OTTHUMG00000180286.1 529 529 1 ENSG00000269365.2 RP11-380M21.4 chr18 47878295 47882444 + antisense NOVEL OTTHUMG00000182511.2 4150 282 2 ENSG00000279366.1 RP11-380M21.3 chr18 47912207 47912504 - TEC KNOWN OTTHUMG00000182512.1 298 298 1 ENSG00000184828.8 ZBTB7C chr18 48026673 48410752 - protein_coding KNOWN OTTHUMG00000180322.1 384080 7648 139 ENSG00000278891.1 RP11-246E12.2 chr18 48147634 48150864 - TEC KNOWN OTTHUMG00000180216.1 3231 2873 2 ENSG00000233461.4 RP11-295G20.2 chr1 231522388 231528556 - antisense NOVEL OTTHUMG00000039487.1 6169 1021 16 ENSG00000206944.1 RNU6-708P chr18 48169784 48169890 - snRNA KNOWN NA 107 107 1 ENSG00000280197.1 C18orf12 chr18 48252301 48252837 + TEC KNOWN OTTHUMG00000180217.1 537 537 1 ENSG00000200872.1 RNA5SP456 chr18 48475487 48475600 - rRNA KNOWN NA 114 114 1 ENSG00000277907.1 RP11-23B5.2 chr18 48478282 48478491 - processed_pseudogene KNOWN OTTHUMG00000187946.1 210 210 1 ENSG00000266984.1 POLR3GP2 chr18 48478561 48479228 + processed_pseudogene KNOWN OTTHUMG00000180324.1 668 668 1 ENSG00000134030.12 CTIF chr18 48539046 48863217 + protein_coding KNOWN OTTHUMG00000132656.13 324172 8100 64 ENSG00000278983.1 RP11-426J5.3 chr18 48564795 48568342 + TEC KNOWN OTTHUMG00000180000.1 3548 3548 1 ENSG00000279629.1 RP11-426J5.1 chr18 48661840 48662635 - TEC KNOWN OTTHUMG00000179905.1 796 796 1 ENSG00000266276.2 AC048380.1 chr18 48670582 48670693 + miRNA NOVEL NA 112 112 1 ENSG00000267762.1 RP11-426J5.2 chr18 48673575 48688419 - antisense NOVEL OTTHUMG00000179906.1 14845 465 3 ENSG00000270106.4 TSNAX-DISC1 chr1 231528653 231819244 + protein_coding KNOWN OTTHUMG00000183905.1 290592 3557 64 ENSG00000279250.1 RP11-46D1.2 chr18 48755693 48756318 + TEC KNOWN OTTHUMG00000179908.1 626 626 1 ENSG00000267764.1 RP11-484L8.1 chr18 48826051 48834770 - antisense NOVEL OTTHUMG00000180025.1 8720 877 2 ENSG00000101665.7 SMAD7 chr18 48919853 48950711 - protein_coding KNOWN OTTHUMG00000132655.6 30859 3692 24 ENSG00000266905.1 RP11-1058N17.1 chr18 48962951 48963941 - lincRNA NOVEL OTTHUMG00000179909.1 991 352 2 ENSG00000280335.1 RP11-15F12.6 chr18 49013106 49013819 + TEC KNOWN OTTHUMG00000179759.1 714 714 1 ENSG00000264269.1 RP11-15F12.1 chr18 49023703 49048474 + antisense NOVEL OTTHUMG00000179698.1 24772 659 5 ENSG00000141627.12 DYM chr18 49041474 49461347 - protein_coding KNOWN OTTHUMG00000132659.8 419874 7256 117 ENSG00000263849.1 MIR4744 chr18 49049687 49049768 - miRNA KNOWN NA 82 82 1 ENSG00000276157.1 AC016866.1 chr18 49066100 49066174 - miRNA NOVEL NA 75 75 1 ENSG00000265128.1 RP11-15F12.3 chr18 49116301 49126479 + antisense NOVEL OTTHUMG00000179749.1 10179 502 2 ENSG00000116918.12 TSNAX chr1 231528653 231566524 + protein_coding KNOWN OTTHUMG00000039486.2 37872 6241 24 ENSG00000266696.1 RP11-30L3.2 chr18 49205912 49208781 + antisense NOVEL OTTHUMG00000179760.1 2870 472 3 ENSG00000263895.1 RP11-110H1.9 chr18 49431744 49447420 - sense_intronic NOVEL OTTHUMG00000179761.1 15677 332 2 ENSG00000264971.1 PRR13P4 chr18 49469803 49470223 + processed_pseudogene KNOWN OTTHUMG00000179700.2 421 421 1 ENSG00000177576.9 C18orf32 chr18 49477250 49492565 - protein_coding KNOWN OTTHUMG00000179688.3 15316 6327 16 ENSG00000215472.8 RPL17-C18orf32 chr18 49481681 49491586 - protein_coding KNOWN OTTHUMG00000179689.3 9906 1507 21 ENSG00000263916.1 RP11-110H1.4 chr18 49484536 49486149 - sense_intronic NOVEL OTTHUMG00000179690.1 1614 483 2 ENSG00000265496.3 MIR1539 chr18 49487339 49491878 + antisense KNOWN OTTHUMG00000179691.1 4540 582 2 ENSG00000278544.1 MIR1539 chr18 49487373 49487422 + miRNA KNOWN NA 50 50 1 ENSG00000265681.5 RPL17 chr18 49488453 49492565 - protein_coding KNOWN OTTHUMG00000179680.5 4113 2515 129 ENSG00000202093.1 SNORD58C chr18 49489245 49489308 - snoRNA KNOWN NA 64 64 1 ENSG00000229228.1 LINC00582 chr1 231591292 231612090 - antisense NOVEL OTTHUMG00000039488.1 20799 597 2 ENSG00000206602.1 SNORD58A chr18 49491283 49491347 - snoRNA KNOWN NA 65 65 1 ENSG00000271982.1 SNORD58B chr18 49491664 49491729 - snoRNA KNOWN NA 66 66 1 ENSG00000265182.1 SRP72P1 chr18 49495147 49496896 - processed_pseudogene KNOWN OTTHUMG00000179681.1 1750 1750 1 ENSG00000264464.1 RP11-110H1.8 chr18 49499390 49501860 + lincRNA NOVEL OTTHUMG00000179657.1 2471 2190 2 ENSG00000101670.10 LIPG chr18 49560699 49599182 + protein_coding KNOWN OTTHUMG00000179658.3 38484 13112 38 ENSG00000267444.1 SMUG1P1 chr18 49650350 49651160 + processed_pseudogene KNOWN OTTHUMG00000179820.1 811 811 1 ENSG00000267674.1 RP11-813F20.2 chr18 49739823 49742063 - lincRNA NOVEL OTTHUMG00000179821.1 2241 340 2 ENSG00000167315.16 ACAA2 chr18 49782167 49813960 - protein_coding KNOWN OTTHUMG00000132667.9 31794 5072 45 ENSG00000266997.2 RP11-886H22.1 chr18 49795793 49837623 - protein_coding NOVEL OTTHUMG00000179848.2 41831 936 7 ENSG00000267322.2 SNHG22 chr18 49814023 49851059 + antisense KNOWN OTTHUMG00000179829.3 37037 2593 6 ENSG00000162946.19 DISC1 chr1 231626815 232041272 + protein_coding KNOWN OTTHUMG00000037835.7 414458 12906 191 ENSG00000251992.1 SCARNA17 chr18 49814133 49814276 + scaRNA KNOWN NA 144 144 1 ENSG00000252139.1 SCARNA18 chr18 49814361 49814443 + scaRNA NOVEL NA 83 83 1 ENSG00000167306.17 MYO5B chr18 49822813 50195093 - protein_coding KNOWN OTTHUMG00000179843.4 372281 10488 99 ENSG00000201668.1 Y_RNA chr18 49871555 49871666 - misc_RNA NOVEL NA 112 112 1 ENSG00000200527.1 RNA5SP457 chr18 49946266 49946389 - rRNA KNOWN NA 124 124 1 ENSG00000267196.1 RP11-813F20.4 chr18 49969721 49970957 - sense_intronic NOVEL OTTHUMG00000179844.1 1237 375 2 ENSG00000267511.1 ADAD1P2 chr18 50063795 50064440 + processed_pseudogene KNOWN OTTHUMG00000179830.1 646 646 1 ENSG00000267591.1 RP11-689E3.2 chr18 50098742 50099162 + processed_pseudogene KNOWN OTTHUMG00000179849.1 421 421 1 ENSG00000240663.3 RN7SL310P chr18 50206998 50207278 - misc_RNA KNOWN NA 281 281 1 ENSG00000172361.5 CFAP53 chr18 50227193 50266522 - protein_coding KNOWN OTTHUMG00000132668.3 39330 1851 8 ENSG00000222986.1 RNU5A-5P chr1 231670635 231670750 + snRNA KNOWN NA 116 116 1 ENSG00000277310.1 RP11-699C17.1 chr18 50256036 50256461 - sense_intronic NOVEL OTTHUMG00000186547.1 426 426 1 ENSG00000141644.16 MBD1 chr18 50266882 50281774 - protein_coding KNOWN OTTHUMG00000132669.7 14893 6734 309 ENSG00000154832.13 CXXC1 chr18 50282343 50288304 - protein_coding KNOWN OTTHUMG00000132670.10 5962 4319 110 ENSG00000267695.1 RP11-1030E3.1 chr18 50302190 50313595 + lincRNA NOVEL OTTHUMG00000179852.1 11406 438 2 ENSG00000274930.1 RP11-1030E3.2 chr18 50318420 50319024 + processed_pseudogene KNOWN OTTHUMG00000187947.1 605 605 1 ENSG00000251997.1 RNA5SP458 chr18 50319002 50319120 + rRNA KNOWN NA 119 119 1 ENSG00000154839.8 SKA1 chr18 50374995 50394173 + protein_coding KNOWN OTTHUMG00000132685.6 19179 2950 31 ENSG00000239780.1 RPLP0P11 chr18 50457887 50458795 + processed_pseudogene KNOWN OTTHUMG00000158245.1 909 909 1 ENSG00000141639.10 MAPK4 chr18 50560078 50731824 + protein_coding KNOWN OTTHUMG00000179853.5 171747 7601 22 ENSG00000267713.1 RP11-10I6.2 chr18 50669510 50670215 + transcribed_processed_pseudogene KNOWN OTTHUMG00000179881.1 706 398 2 ENSG00000274121.1 DISC2 chr1 231814982 231815186 + misc_RNA NOVEL NA 205 205 1 ENSG00000134042.11 MRO chr18 50795120 50825402 - protein_coding KNOWN OTTHUMG00000132692.13 30283 5525 74 ENSG00000267233.1 HNRNPA3P16 chr18 50814392 50815730 + processed_pseudogene KNOWN OTTHUMG00000180040.1 1339 1016 2 ENSG00000239689.1 RPL17P46 chr18 50823577 50824120 + processed_pseudogene KNOWN OTTHUMG00000158248.2 544 544 1 ENSG00000082212.10 ME2 chr18 50879049 50954257 + protein_coding KNOWN OTTHUMG00000132694.4 75209 9363 40 ENSG00000200752.1 Y_RNA chr18 50959267 50959379 - misc_RNA NOVEL NA 113 113 1 ENSG00000141642.7 ELAC1 chr18 50967991 50988121 + protein_coding KNOWN OTTHUMG00000132695.3 20131 3970 13 ENSG00000267699.2 RP11-729L2.2 chr18 50968019 51058144 + protein_coding NOVEL OTTHUMG00000180063.3 90126 1305 13 ENSG00000141646.12 SMAD4 chr18 51028394 51085045 + protein_coding KNOWN OTTHUMG00000132696.8 56652 13123 89 ENSG00000267717.1 SRSF10P1 chr18 51158282 51159383 - processed_pseudogene KNOWN OTTHUMG00000180041.1 1102 764 2 ENSG00000176624.10 MEX3C chr18 51174550 51218304 - protein_coding KNOWN OTTHUMG00000132693.4 43755 7481 8 ENSG00000226758.1 DISC1-IT1 chr1 231925834 231945233 + sense_intronic KNOWN OTTHUMG00000037834.1 19400 762 4 ENSG00000207154.1 RNU1-46P chr18 51283733 51283896 - snRNA KNOWN NA 164 164 1 ENSG00000227115.5 RP11-267C16.1 chr18 51346249 51562569 + lincRNA NOVEL OTTHUMG00000179692.2 216321 5513 22 ENSG00000266201.1 SS18L2P2 chr18 51421063 51421674 - processed_pseudogene KNOWN OTTHUMG00000179693.1 612 235 2 ENSG00000266003.1 RP11-267C16.2 chr18 51433437 51434783 + processed_pseudogene KNOWN OTTHUMG00000179694.2 1347 1347 1 ENSG00000265402.1 RSL24D1P9 chr18 51612639 51613110 - processed_pseudogene KNOWN OTTHUMG00000179695.1 472 472 1 ENSG00000265712.1 RP11-440L16.1 chr18 51687525 51688209 - processed_pseudogene KNOWN OTTHUMG00000179696.1 685 685 1 ENSG00000215457.5 RPS8P3 chr18 51845007 51845628 - processed_pseudogene KNOWN OTTHUMG00000158249.2 622 622 1 ENSG00000266335.1 RP11-25O3.1 chr18 52336361 52339025 - lincRNA NOVEL OTTHUMG00000179712.1 2665 714 2 ENSG00000187323.10 DCC chr18 52340172 53535903 + protein_coding KNOWN OTTHUMG00000132698.5 1195732 13160 143 ENSG00000280098.1 AC011155.1 chr18 52409042 52409257 + protein_coding KNOWN NA 216 216 1 ENSG00000235152.1 RP5-865N13.2 chr1 232160091 232185643 + lincRNA NOVEL OTTHUMG00000037849.1 25553 818 3 ENSG00000273762.1 VN1R76P chr18 52419189 52419644 - unprocessed_pseudogene KNOWN OTTHUMG00000187948.1 456 456 1 ENSG00000221291.1 AC090660.1 chr18 52937294 52937403 + miRNA NOVEL NA 110 110 1 ENSG00000263872.1 MIR4528 chr18 53237101 53237190 + miRNA KNOWN NA 90 90 1 ENSG00000264263.1 RP11-671P2.1 chr18 53480835 53568283 - antisense NOVEL OTTHUMG00000179713.1 87449 457 3 ENSG00000263438.4 RP11-202D1.3 chr18 53568447 53597851 + lincRNA NOVEL OTTHUMG00000179714.1 29405 1076 13 ENSG00000260433.1 RP11-202D1.2 chr18 53579623 53581059 - lincRNA NOVEL OTTHUMG00000176187.1 1437 1037 2 ENSG00000242945.2 RPL29P32 chr18 53605254 53605725 - processed_pseudogene KNOWN OTTHUMG00000158250.2 472 472 1 ENSG00000221058.1 AC090666.1 chr18 54086586 54086656 - miRNA NOVEL NA 71 71 1 ENSG00000264296.1 RP11-116K4.1 chr18 54142133 54142577 + processed_pseudogene KNOWN OTTHUMG00000179758.1 445 445 1 ENSG00000134046.10 MBD2 chr18 54151601 54224788 - protein_coding KNOWN OTTHUMG00000132705.4 73188 5810 22 ENSG00000272510.1 RP4-680D5.8 chr1 15565611 15565956 - antisense NOVEL OTTHUMG00000185680.1 346 346 1 ENSG00000236372.1 RP5-865N13.1 chr1 232174932 232180113 - lincRNA NOVEL OTTHUMG00000037832.1 5182 2241 2 ENSG00000207233.1 SNORA37 chr18 54222284 54222412 - snoRNA KNOWN NA 129 129 1 ENSG00000277324.1 RP11-850A17.1 chr18 54268346 54270028 - antisense NOVEL OTTHUMG00000186552.1 1683 1683 1 ENSG00000101751.9 POLI chr18 54269404 54321266 + protein_coding KNOWN OTTHUMG00000132704.6 51863 9471 88 ENSG00000174448.7 STARD6 chr18 54324358 54357964 - protein_coding KNOWN OTTHUMG00000132702.5 33607 1862 24 ENSG00000166845.12 C18orf54 chr18 54357917 54385218 + protein_coding KNOWN OTTHUMG00000132703.5 27302 6062 41 ENSG00000264350.1 SNRPGP2 chr18 54406889 54407114 - processed_pseudogene KNOWN OTTHUMG00000179764.1 226 226 1 ENSG00000264564.1 RP11-61D1.2 chr18 54525434 54525563 + processed_pseudogene KNOWN OTTHUMG00000179765.1 130 130 1 ENSG00000267428.1 RP11-289E15.1 chr18 54566997 54567303 + processed_pseudogene KNOWN OTTHUMG00000179889.1 307 307 1 ENSG00000178690.2 DYNAP chr18 54587757 54599493 + protein_coding KNOWN OTTHUMG00000132709.2 11737 2137 6 ENSG00000041353.8 RAB27B chr18 54717860 54895516 + protein_coding KNOWN OTTHUMG00000132710.5 177657 7432 19 ENSG00000224436.1 RP11-284L19.1 chr1 232221938 232222174 - processed_pseudogene KNOWN OTTHUMG00000037847.1 237 237 1 ENSG00000267524.1 RPSAP57 chr18 54744750 54745581 + processed_pseudogene KNOWN OTTHUMG00000158251.2 832 832 1 ENSG00000267311.1 RP11-99A1.2 chr18 54879457 54880809 + lincRNA NOVEL OTTHUMG00000179833.1 1353 1100 2 ENSG00000267112.1 RP11-839G9.1 chr18 54885866 54898083 - antisense NOVEL OTTHUMG00000179811.1 12218 567 4 ENSG00000166510.12 CCDC68 chr18 54901509 54959508 - protein_coding KNOWN OTTHUMG00000132708.3 58000 5180 50 ENSG00000267647.1 MAP1LC3P chr18 54954403 54954732 + processed_pseudogene KNOWN OTTHUMG00000179818.1 330 330 1 ENSG00000264804.1 AC098848.1 chr18 55001296 55001398 - miRNA NOVEL NA 103 103 1 ENSG00000267013.4 CTD-2171N6.1 chr18 55105904 55124306 - lincRNA NOVEL OTTHUMG00000176191.2 18403 3170 6 ENSG00000252437.1 RNA5SP459 chr18 55146546 55146645 - rRNA KNOWN NA 100 100 1 ENSG00000196628.12 TCF4 chr18 55222331 55664787 - protein_coding KNOWN OTTHUMG00000132713.28 442457 24564 765 ENSG00000267028.1 RP11-619L19.1 chr18 55452533 55482940 + antisense NOVEL OTTHUMG00000179868.1 30408 396 2 ENSG00000242794.2 RN7SL299P chr1 232222866 232223145 + misc_RNA KNOWN NA 280 280 1 ENSG00000264571.1 MIR4529 chr18 55479221 55479298 + miRNA KNOWN NA 78 78 1 ENSG00000267402.1 RP11-619L19.2 chr18 55492175 55496392 + antisense NOVEL OTTHUMG00000179869.1 4218 445 2 ENSG00000242320.2 RPL21P126 chr18 55635833 55636310 + processed_pseudogene KNOWN OTTHUMG00000158252.3 478 478 1 ENSG00000267284.1 RP11-397A16.1 chr18 55721063 55788761 + lincRNA NOVEL OTTHUMG00000179870.1 67699 1231 11 ENSG00000267325.1 LINC01415 chr18 55776727 55781721 - lincRNA NOVEL OTTHUMG00000179871.1 4995 4134 4 ENSG00000267172.1 RP11-397A16.3 chr18 55817167 55819759 + lincRNA NOVEL OTTHUMG00000179872.1 2593 2593 1 ENSG00000260930.1 RP11-214L13.1 chr18 55881688 55920199 - lincRNA NOVEL OTTHUMG00000176192.1 38512 2310 4 ENSG00000267327.1 CTD-2008L17.1 chr18 55893038 56023522 + lincRNA NOVEL OTTHUMG00000180033.1 130485 949 5 ENSG00000206129.3 CTD-2008L17.2 chr18 56003613 56191262 - lincRNA NOVEL OTTHUMG00000180034.2 187650 3011 12 ENSG00000267057.4 RP11-456O19.2 chr18 56042135 56096319 + lincRNA NOVEL OTTHUMG00000180036.1 54185 1248 17 ENSG00000281475.1 BX323014.1 chr1 232223059 232223141 + miRNA NOVEL NA 83 83 1 ENSG00000267399.1 RP11-456O19.5 chr18 56061109 56063078 - lincRNA NOVEL OTTHUMG00000180039.1 1970 552 2 ENSG00000201816.1 SNORA73 chr18 56079394 56079594 - snoRNA NOVEL NA 201 201 1 ENSG00000267712.4 LINC01539 chr18 56083356 56137536 - lincRNA NOVEL OTTHUMG00000180037.2 54181 3458 32 ENSG00000267732.1 RP11-456O19.3 chr18 56138612 56143221 + lincRNA NOVEL OTTHUMG00000180038.1 4610 454 2 ENSG00000091164.11 TXNL1 chr18 56597208 56651600 - protein_coding KNOWN OTTHUMG00000132722.4 54393 11298 57 ENSG00000091157.12 WDR7 chr18 56651343 57036606 + protein_coding KNOWN OTTHUMG00000132721.6 385264 15694 107 ENSG00000206865.1 Y_RNA chr18 56753226 56753326 - misc_RNA NOVEL NA 101 101 1 ENSG00000267146.1 RP11-383D22.1 chr18 56872668 56873970 - antisense NOVEL OTTHUMG00000180074.1 1303 581 2 ENSG00000212539.2 U3 chr18 56957270 56957469 + snoRNA NOVEL NA 200 200 1 ENSG00000267225.1 WDR7-OT1 chr18 57027832 57038845 + sense_overlapping NOVEL OTTHUMG00000180085.1 11014 565 3 ENSG00000116991.9 SIPA1L2 chr1 232397965 232561558 - protein_coding KNOWN OTTHUMG00000037820.1 163594 7641 63 ENSG00000258609.2 LINC-ROR chr18 57054559 57072119 - lincRNA NOVEL OTTHUMG00000171587.2 17561 2603 4 ENSG00000267789.1 CTD-2526M8.3 chr18 57136322 57146998 - lincRNA NOVEL OTTHUMG00000180099.1 10677 522 3 ENSG00000228075.4 BOD1L2 chr18 57147062 57150300 + protein_coding KNOWN OTTHUMG00000180124.1 3239 3239 1 ENSG00000267726.1 CTD-2526M8.2 chr18 57169615 57171194 - lincRNA NOVEL OTTHUMG00000180100.1 1580 478 2 ENSG00000202240.1 RNU6-737P chr18 57284602 57284708 - snRNA KNOWN NA 107 107 1 ENSG00000177511.5 ST8SIA3 chr18 57350813 57371731 + protein_coding KNOWN OTTHUMG00000180101.3 20919 12068 9 ENSG00000277837.1 RP11-714M23.2 chr18 57427133 57432112 + lincRNA NOVEL OTTHUMG00000172421.1 4980 4980 1 ENSG00000119547.5 ONECUT2 chr18 57435685 57491297 + protein_coding KNOWN OTTHUMG00000159776.4 55613 16234 5 ENSG00000266636.1 AC090340.1 chr18 57435821 57435880 + miRNA NOVEL NA 60 60 1 ENSG00000066926.9 FECH chr18 57548283 57586772 - protein_coding KNOWN OTTHUMG00000132740.2 38490 4473 66 ENSG00000238382.1 RNU6-1211P chr1 232700204 232700308 + snRNA KNOWN NA 105 105 1 ENSG00000278703.1 RP11-706P11.2 chr18 57588611 57589091 - lincRNA NOVEL OTTHUMG00000186554.1 481 481 1 ENSG00000134440.10 NARS chr18 57600656 57622213 - protein_coding KNOWN OTTHUMG00000180125.5 21558 4089 82 ENSG00000267040.5 RP11-35G9.3 chr18 57630302 57669296 + antisense NOVEL OTTHUMG00000132739.3 38995 2397 8 ENSG00000267787.4 RP11-35G9.5 chr18 57639455 57738044 + antisense NOVEL OTTHUMG00000180254.1 98590 2032 9 ENSG00000081923.9 ATP8B1 chr18 57646426 57803101 - protein_coding KNOWN OTTHUMG00000180255.1 156676 6652 72 ENSG00000202159.1 RNU6-742P chr18 57755394 57755500 + snRNA KNOWN NA 107 107 1 ENSG00000231544.3 RSL24D1P11 chr18 57838476 57838966 + processed_pseudogene KNOWN OTTHUMG00000180257.1 491 491 1 ENSG00000267209.4 RP11-693L9.2 chr18 57961231 57964434 - lincRNA NOVEL OTTHUMG00000179890.1 3204 405 9 ENSG00000265200.1 AC090324.1 chr18 58016784 58016884 - miRNA NOVEL NA 101 101 1 ENSG00000235028.3 HMGN1P30 chr18 58018794 58019061 - processed_pseudogene KNOWN OTTHUMG00000179874.1 268 268 1 ENSG00000225919.1 RP11-66A2.1 chr1 232718071 232722250 + lincRNA PUTATIVE OTTHUMG00000037823.1 4180 372 3 ENSG00000049759.15 NEDD4L chr18 58044367 58401540 + protein_coding KNOWN OTTHUMG00000179875.7 357174 16120 443 ENSG00000267743.4 RP11-718I15.1 chr18 58189834 58195696 - antisense NOVEL OTTHUMG00000179964.1 5863 568 6 ENSG00000267504.1 RP11-845C23.2 chr18 58371566 58372666 + sense_intronic NOVEL OTTHUMG00000179946.1 1101 1101 1 ENSG00000267396.1 RP11-845C23.3 chr18 58398663 58400082 - antisense NOVEL OTTHUMG00000179965.1 1420 768 2 ENSG00000267675.1 RP11-1151B14.2 chr18 58416765 58417628 + lincRNA NOVEL OTTHUMG00000179966.1 864 646 2 ENSG00000267391.2 RP11-1151B14.3 chr18 58446275 58453766 + lincRNA NOVEL OTTHUMG00000179967.2 7492 4521 2 ENSG00000207778.2 MIR122 chr18 58451068 58451176 + miRNA KNOWN NA 109 109 1 ENSG00000276403.1 RP11-1151B14.1 chr18 58476191 58477484 + lincRNA NOVEL OTTHUMG00000176193.1 1294 1294 1 ENSG00000198796.6 ALPK2 chr18 58481247 58628957 - protein_coding KNOWN OTTHUMG00000132755.2 147711 9431 24 ENSG00000274354.1 RP11-1151B14.5 chr18 58511598 58512310 - sense_intronic NOVEL OTTHUMG00000186655.1 713 713 1 ENSG00000236497.1 RP11-66A2.2 chr1 232727254 232742715 - lincRNA NOVEL OTTHUMG00000037825.1 15462 2042 4 ENSG00000267257.1 RP11-1151B14.4 chr18 58535415 58538552 + antisense NOVEL OTTHUMG00000179968.1 3138 2553 2 ENSG00000267579.1 RP11-126O1.2 chr18 58557070 58566677 + antisense NOVEL OTTHUMG00000179969.1 9608 335 2 ENSG00000252284.1 SNORD28 chr18 58600631 58600698 + snoRNA NOVEL NA 68 68 1 ENSG00000239659.2 RPL9P31 chr18 58631259 58632120 + processed_pseudogene KNOWN OTTHUMG00000158254.2 862 578 2 ENSG00000275418.1 RP11-126O1.6 chr18 58659858 58660524 + lincRNA NOVEL OTTHUMG00000186656.1 667 249 2 ENSG00000267226.2 RP11-126O1.5 chr18 58670009 58671877 - antisense NOVEL OTTHUMG00000180006.2 1869 1209 2 ENSG00000172175.11 MALT1 chr18 58671386 58754477 + protein_coding KNOWN OTTHUMG00000132761.3 83092 10850 46 ENSG00000267476.1 RP11-126O1.4 chr18 58672613 58752730 - antisense NOVEL OTTHUMG00000180007.1 80118 670 7 ENSG00000266946.1 MRPL37P1 chr18 58690356 58692153 + processed_pseudogene KNOWN OTTHUMG00000180008.1 1798 1337 2 ENSG00000267705.1 RP11-108P20.3 chr18 58752179 58753898 - lincRNA NOVEL OTTHUMG00000180010.1 1720 625 2 ENSG00000212916.4 MAP10 chr1 232804892 232808407 + protein_coding KNOWN OTTHUMG00000037819.3 3516 3516 1 ENSG00000267501.1 RP11-108P20.2 chr18 58754859 58757842 - lincRNA NOVEL OTTHUMG00000180011.1 2984 740 2 ENSG00000201598.1 RNU6-219P chr18 58805268 58805374 + snRNA KNOWN NA 107 107 1 ENSG00000267593.1 RP11-108P20.4 chr18 58813880 58834364 + lincRNA NOVEL OTTHUMG00000180012.1 20485 478 3 ENSG00000199713.1 U8 chr18 58818883 58819016 - snoRNA NOVEL NA 134 134 1 ENSG00000074657.12 ZNF532 chr18 58862600 58986480 + protein_coding KNOWN OTTHUMG00000132759.5 123881 11951 120 ENSG00000251870.1 RNU2-69P chr18 58926197 58926296 - snRNA KNOWN NA 100 100 1 ENSG00000224367.5 OACYLP chr18 58996734 59069338 + unitary_pseudogene KNOWN OTTHUMG00000154709.2 72605 3166 34 ENSG00000267215.1 RP11-685A21.1 chr18 59081924 59084981 + lincRNA NOVEL OTTHUMG00000180032.1 3058 911 6 ENSG00000166562.7 SEC11C chr18 59139477 59158836 + protein_coding KNOWN OTTHUMG00000132762.3 19360 4511 31 ENSG00000134443.8 GRP chr18 59220168 59230774 + protein_coding KNOWN OTTHUMG00000132760.4 10607 851 13 ENSG00000206835.1 RNU1-74P chr1 232832017 232832187 - snRNA KNOWN NA 171 171 1 ENSG00000134438.9 RAX chr18 59267035 59274086 - protein_coding KNOWN OTTHUMG00000132757.3 7052 3725 8 ENSG00000166569.7 CPLX4 chr18 59275156 59318649 - protein_coding KNOWN OTTHUMG00000132756.2 43494 3545 6 ENSG00000074695.5 LMAN1 chr18 59327823 59359962 - protein_coding KNOWN OTTHUMG00000132758.2 32140 6767 26 ENSG00000267677.1 RP11-27G24.1 chr18 59360700 59386749 + lincRNA NOVEL OTTHUMG00000180086.1 26050 417 2 ENSG00000183287.12 CCBE1 chr18 59430940 59697380 - protein_coding KNOWN OTTHUMG00000180087.3 266441 6577 32 ENSG00000267000.1 RP11-27G24.3 chr18 59459072 59465682 + antisense NOVEL OTTHUMG00000180088.1 6611 487 5 ENSG00000267061.1 RP11-760L24.1 chr18 59563709 59568615 + antisense NOVEL OTTHUMG00000180089.1 4907 546 3 ENSG00000267269.1 RP11-2N1.1 chr18 59685820 59688400 + antisense NOVEL OTTHUMG00000180090.1 2581 542 2 ENSG00000267774.2 RP11-2N1.2 chr18 59696459 59698111 + antisense NOVEL OTTHUMG00000180091.2 1653 1081 2 ENSG00000273664.1 RP11-2N1.3 chr18 59700523 59700946 + lincRNA NOVEL OTTHUMG00000186658.1 424 424 1 ENSG00000116771.5 AGMAT chr1 15572353 15585110 - protein_coding KNOWN OTTHUMG00000002357.1 12758 2500 7 ENSG00000273857.1 AL122003.1 chr1 232898914 232898999 + miRNA NOVEL NA 86 86 1 ENSG00000221471.1 AC098847.1 chr18 59749677 59749757 + miRNA NOVEL NA 81 81 1 ENSG00000224161.3 RPS26P54 chr18 59761558 59761905 + processed_pseudogene KNOWN OTTHUMG00000158255.1 348 348 1 ENSG00000267486.1 GLUD1P4 chr18 59778572 59778989 + processed_pseudogene KNOWN OTTHUMG00000179948.1 418 418 1 ENSG00000267669.1 RP11-824M15.3 chr18 59821040 59825261 + transcribed_processed_pseudogene KNOWN OTTHUMG00000179949.2 4222 1114 4 ENSG00000141682.11 PMAIP1 chr18 59899948 59904306 + protein_coding KNOWN OTTHUMG00000132765.2 4359 2235 8 ENSG00000267066.1 RP11-866E20.1 chr18 59929226 59930330 + processed_pseudogene KNOWN OTTHUMG00000179950.1 1105 489 3 ENSG00000267497.1 NFE2L3P1 chr18 59969438 59971396 + processed_pseudogene KNOWN OTTHUMG00000179951.1 1959 1959 1 ENSG00000239398.3 RN7SL342P chr18 59972914 59973207 + misc_RNA KNOWN NA 294 294 1 ENSG00000256704.3 SDCCAG3P1 chr18 60009994 60011143 - processed_pseudogene KNOWN OTTHUMG00000179952.1 1150 1150 1 ENSG00000267462.1 RP11-866E20.3 chr18 60010281 60014258 + lincRNA NOVEL OTTHUMG00000179953.1 3978 1762 3 ENSG00000232175.1 RP4-659I19.1 chr1 232917235 232918018 + processed_pseudogene KNOWN OTTHUMG00000037821.1 784 784 1 ENSG00000267742.1 FAM60CP chr18 60016778 60017441 - processed_pseudogene KNOWN OTTHUMG00000179954.1 664 664 1 ENSG00000252555.1 RNU6-567P chr18 60018625 60018731 + snRNA KNOWN NA 107 107 1 ENSG00000267686.1 RP11-795H16.3 chr18 60125033 60161195 + lincRNA NOVEL OTTHUMG00000179955.1 36163 571 3 ENSG00000242060.1 RPS3AP49 chr18 60149576 60150365 + processed_pseudogene KNOWN OTTHUMG00000158256.1 790 790 1 ENSG00000202468.1 RNU4-17P chr18 60163567 60163707 + snRNA KNOWN NA 141 141 1 ENSG00000267620.1 RP11-795H16.2 chr18 60196555 60198172 + processed_pseudogene KNOWN OTTHUMG00000179956.1 1618 1618 1 ENSG00000267401.1 RP11-396N11.1 chr18 60294151 60301118 + lincRNA NOVEL OTTHUMG00000180042.1 6968 419 3 ENSG00000166603.4 MC4R chr18 60371110 60372775 - protein_coding KNOWN OTTHUMG00000132766.1 1666 1666 1 ENSG00000267400.1 RP11-325K19.3 chr18 60495868 60496336 - processed_pseudogene KNOWN OTTHUMG00000179957.1 469 287 2 ENSG00000266915.1 MRPS5P4 chr18 60519841 60520165 + processed_pseudogene KNOWN OTTHUMG00000179958.1 325 325 1 ENSG00000135778.10 NTPCR chr1 232950605 232983882 + protein_coding KNOWN OTTHUMG00000037822.3 33278 15854 31 ENSG00000267687.1 RP11-325K19.6 chr18 60525616 60526156 - processed_pseudogene KNOWN OTTHUMG00000180043.1 541 541 1 ENSG00000253011.1 AC010928.1 chr18 60555143 60555224 + miRNA NOVEL NA 82 82 1 ENSG00000267382.1 RP11-325K19.2 chr18 60611773 60654623 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000179959.1 42851 1692 17 ENSG00000267098.1 RP11-325K19.1 chr18 60630167 60902726 - lincRNA NOVEL OTTHUMG00000179960.1 272560 558 8 ENSG00000267153.1 CTBP2P3 chr18 60663115 60664369 + processed_pseudogene KNOWN OTTHUMG00000179961.1 1255 1255 1 ENSG00000267513.3 RP11-622J9.1 chr18 60794613 60794916 - processed_pseudogene KNOWN OTTHUMG00000180044.1 304 304 1 ENSG00000101542.8 CDH20 chr18 61333582 61555773 + protein_coding KNOWN OTTHUMG00000132768.2 222192 4119 37 ENSG00000206769.1 RNU6-116P chr18 61391595 61391703 + snRNA KNOWN NA 109 109 1 ENSG00000243256.1 RPL30P14 chr18 61404858 61405205 - processed_pseudogene KNOWN OTTHUMG00000158258.1 348 348 1 ENSG00000267316.4 RP11-879F14.3 chr18 61571342 61579456 - lincRNA NOVEL OTTHUMG00000180045.1 8115 610 8 ENSG00000135749.17 PCNXL2 chr1 232983435 233295713 - protein_coding KNOWN OTTHUMG00000037824.6 312279 13815 176 ENSG00000267279.1 RP11-879F14.2 chr18 61585746 61606916 - lincRNA NOVEL OTTHUMG00000180046.1 21171 1199 7 ENSG00000267175.4 RP11-879F14.1 chr18 61592375 61748832 - lincRNA NOVEL OTTHUMG00000180734.1 156458 1156 10 ENSG00000267038.1 RP11-1096D5.2 chr18 61681653 61682695 + lincRNA NOVEL OTTHUMG00000180047.1 1043 316 2 ENSG00000260440.2 LINC01544 chr18 61748176 61756646 + lincRNA NOVEL OTTHUMG00000176195.2 8471 5168 4 ENSG00000176641.9 RNF152 chr18 61808063 61894247 - protein_coding KNOWN OTTHUMG00000132774.3 86185 10632 13 ENSG00000267597.1 RPIAP1 chr18 61957273 61958014 - processed_pseudogene KNOWN OTTHUMG00000180097.1 742 742 1 ENSG00000197563.8 PIGN chr18 62043567 62187118 - protein_coding KNOWN OTTHUMG00000180098.7 143552 6796 167 ENSG00000134444.12 KIAA1468 chr18 62187258 62307829 + protein_coding KNOWN OTTHUMG00000132780.4 120572 8299 122 ENSG00000266900.1 RP11-173A16.2 chr18 62245810 62247412 + sense_intronic NOVEL OTTHUMG00000180171.1 1603 1603 1 ENSG00000267560.1 RP11-173A16.1 chr18 62300036 62300998 - antisense NOVEL OTTHUMG00000180154.1 963 637 2 ENSG00000231940.1 RPS7P3 chr1 233288868 233289447 - processed_pseudogene KNOWN OTTHUMG00000037888.1 580 580 1 ENSG00000141655.14 TNFRSF11A chr18 62325287 62391292 + protein_coding KNOWN OTTHUMG00000132779.3 66006 8993 38 ENSG00000199867.1 Y_RNA chr18 62330812 62330913 + misc_RNA NOVEL NA 102 102 1 ENSG00000267341.1 RP11-640A1.3 chr18 62372894 62378130 - antisense NOVEL OTTHUMG00000180155.1 5237 324 3 ENSG00000241088.2 RPL17P44 chr18 62415678 62416227 + processed_pseudogene KNOWN OTTHUMG00000158260.2 550 550 1 ENSG00000267487.1 RP11-640A1.4 chr18 62418318 62418576 + processed_pseudogene KNOWN OTTHUMG00000180163.1 259 259 1 ENSG00000266920.1 ACTBP9 chr18 62442028 62443126 + processed_pseudogene KNOWN OTTHUMG00000180164.1 1099 1099 1 ENSG00000141664.8 ZCCHC2 chr18 62523007 62587709 + protein_coding KNOWN OTTHUMG00000180165.2 64703 10235 76 ENSG00000278017.1 RP11-120K19.4 chr18 62525919 62526325 - antisense NOVEL OTTHUMG00000186660.1 407 407 1 ENSG00000279236.1 RP11-120K19.3 chr18 62551203 62552505 + TEC KNOWN OTTHUMG00000180166.1 1303 1303 1 ENSG00000243549.3 RN7SL705P chr18 62650308 62650601 - misc_RNA KNOWN NA 294 294 1 ENSG00000251508.1 RP5-862P8.3 chr1 233295325 233295727 - unprocessed_pseudogene KNOWN OTTHUMG00000057829.1 403 324 2 ENSG00000081913.12 PHLPP1 chr18 62715450 62980433 + protein_coding KNOWN OTTHUMG00000150629.2 264984 9142 41 ENSG00000206746.1 RNU6-142P chr18 62731226 62731332 - snRNA KNOWN NA 107 107 1 ENSG00000171791.11 BCL2 chr18 63123346 63320128 - protein_coding KNOWN OTTHUMG00000132791.3 196783 7665 8 ENSG00000267766.1 RP11-299P2.1 chr18 63151114 63151320 - sense_intronic NOVEL OTTHUMG00000180157.2 207 207 1 ENSG00000267701.2 RP11-28F1.2 chr18 63313802 63314376 - sense_intronic NOVEL OTTHUMG00000180151.2 575 575 1 ENSG00000119537.14 KDSR chr18 63327726 63367510 - protein_coding KNOWN OTTHUMG00000132792.4 39785 9287 58 ENSG00000267390.1 RP11-635N19.1 chr18 63367328 63381629 + antisense NOVEL OTTHUMG00000180139.1 14302 785 2 ENSG00000119541.8 VPS4B chr18 63389190 63422483 - protein_coding KNOWN OTTHUMG00000132790.4 33294 4315 48 ENSG00000267430.1 RP11-635N19.2 chr18 63415317 63416469 - processed_pseudogene KNOWN OTTHUMG00000180140.1 1153 1153 1 ENSG00000206075.12 SERPINB5 chr18 63476761 63505085 + protein_coding KNOWN OTTHUMG00000141307.4 28325 3939 26 ENSG00000143674.9 MLK4 chr1 233327768 233385148 + protein_coding KNOWN OTTHUMG00000037889.1 57381 7916 20 ENSG00000269989.1 RP11-635N19.3 chr18 63485601 63486018 + sense_intronic NOVEL OTTHUMG00000184064.1 418 418 1 ENSG00000214318.3 ATP5G1P6 chr18 63496989 63497400 + processed_pseudogene KNOWN OTTHUMG00000141308.1 412 412 1 ENSG00000166634.5 SERPINB12 chr18 63556160 63567011 + protein_coding KNOWN OTTHUMG00000132789.2 10852 1278 14 ENSG00000197641.10 SERPINB13 chr18 63586989 63604639 + protein_coding KNOWN OTTHUMG00000060406.5 17651 4535 38 ENSG00000206073.9 SERPINB4 chr18 63637259 63644298 - protein_coding KNOWN OTTHUMG00000060405.3 7040 2013 24 ENSG00000057149.13 SERPINB3 chr18 63637719 63661963 - protein_coding KNOWN OTTHUMG00000060403.2 24245 2182 22 ENSG00000206072.11 SERPINB11 chr18 63647579 63726432 + protein_coding KNOWN OTTHUMG00000060404.9 78854 3696 56 ENSG00000166396.11 SERPINB7 chr18 63752935 63805376 + protein_coding KNOWN OTTHUMG00000060591.3 52442 2637 47 ENSG00000197632.7 SERPINB2 chr18 63871692 63903890 + protein_coding KNOWN OTTHUMG00000060592.3 32199 2748 38 ENSG00000242550.4 SERPINB10 chr18 63897174 63936111 + protein_coding KNOWN OTTHUMG00000060594.5 38938 2700 30 ENSG00000252501.1 RNU4-77P chr1 233448626 233448781 - snRNA KNOWN NA 156 156 1 ENSG00000221887.5 HMSD chr18 63949301 63981774 + protein_coding KNOWN OTTHUMG00000060593.6 32474 2920 14 ENSG00000166401.12 SERPINB8 chr18 63969925 64005667 + protein_coding KNOWN OTTHUMG00000060596.6 35743 4998 43 ENSG00000237314.2 RPL12P39 chr18 64072158 64072653 + processed_pseudogene KNOWN OTTHUMG00000060595.3 496 496 1 ENSG00000179676.6 LINC00305 chr18 64080009 64149030 - lincRNA KNOWN OTTHUMG00000060637.2 69022 1035 9 ENSG00000267134.1 RP11-146N18.1 chr18 64104091 64423601 + lincRNA NOVEL OTTHUMG00000180126.1 319511 1722 10 ENSG00000236392.2 AC100848.1 chr18 64147209 64159299 + lincRNA NOVEL OTTHUMG00000060638.2 12091 651 6 ENSG00000266952.1 LINC01538 chr18 64213082 64260055 - lincRNA NOVEL OTTHUMG00000180127.1 46974 2408 3 ENSG00000275448.1 RP11-762J3.1 chr18 64677796 64677993 - processed_pseudogene KNOWN OTTHUMG00000187949.1 198 198 1 ENSG00000280718.1 AC027506.1 chr18 64682136 64682203 - miRNA NOVEL NA 68 68 1 ENSG00000263863.1 AC007948.1 chr18 65105873 65125710 - lincRNA NOVEL OTTHUMG00000178486.1 19838 242 2 ENSG00000135750.13 KCNK1 chr1 233614004 233672512 + protein_coding KNOWN OTTHUMG00000037923.3 58509 3627 22 ENSG00000264131.1 AC007631.1 chr18 65186159 65187018 + lincRNA NOVEL OTTHUMG00000178487.1 860 189 2 ENSG00000264232.1 RP11-453M23.1 chr18 65424013 65447512 + lincRNA NOVEL OTTHUMG00000178488.1 23500 559 3 ENSG00000265217.1 RP11-775G23.1 chr18 65606090 65652053 + lincRNA NOVEL OTTHUMG00000178489.1 45964 852 4 ENSG00000081138.12 CDH7 chr18 65750252 65890341 + protein_coding KNOWN OTTHUMG00000132800.3 140090 14532 37 ENSG00000263720.1 RP11-389J22.1 chr18 65865262 65866397 + sense_intronic NOVEL OTTHUMG00000178494.1 1136 792 2 ENSG00000263622.1 RP11-389J22.3 chr18 65917782 65920942 - lincRNA NOVEL OTTHUMG00000178496.1 3161 312 2 ENSG00000264685.1 PRPF19P1 chr18 66068750 66069647 - processed_pseudogene KNOWN OTTHUMG00000178514.1 898 898 1 ENSG00000071991.7 CDH19 chr18 66501083 66604138 - protein_coding KNOWN OTTHUMG00000132802.3 103056 6864 45 ENSG00000221536.1 AC091643.1 chr18 66653409 66653501 - miRNA NOVEL NA 93 93 1 ENSG00000238680.1 RNU6-1037P chr18 66946116 66946222 + snRNA KNOWN NA 107 107 1 ENSG00000265744.1 MIR4427 chr1 233624152 233624219 + miRNA KNOWN NA 68 68 1 ENSG00000263354.1 MIR5011 chr18 67081584 67081686 + miRNA KNOWN NA 103 103 1 ENSG00000264054.1 RPL31P9 chr18 67137611 67137751 - processed_pseudogene KNOWN OTTHUMG00000178515.1 141 141 1 ENSG00000281905.1 AC091042.1 chr18 67296282 67296382 + miRNA NOVEL NA 101 101 1 ENSG00000265936.1 RP11-563H6.1 chr18 67375133 67375305 + processed_pseudogene KNOWN OTTHUMG00000178536.1 173 173 1 ENSG00000260578.1 CTD-2541J13.1 chr18 67481791 67484966 - lincRNA NOVEL OTTHUMG00000176196.1 3176 3176 1 ENSG00000171451.13 DSEL chr18 67506582 67516980 - protein_coding KNOWN OTTHUMG00000132804.2 10399 9531 2 ENSG00000263424.1 CTD-2541J13.2 chr18 67506589 67514030 + antisense NOVEL OTTHUMG00000178537.1 7442 3305 4 ENSG00000265533.1 RP11-638L3.1 chr18 67516546 67899619 + lincRNA NOVEL OTTHUMG00000178538.1 383074 2991 5 ENSG00000264040.1 RP11-29O13.1 chr18 67602692 67603022 - processed_pseudogene KNOWN OTTHUMG00000178539.1 331 331 1 ENSG00000263594.1 RP11-28O3.2 chr18 67672221 67676078 - lincRNA NOVEL OTTHUMG00000178540.1 3858 288 3 ENSG00000237301.1 RP4-680D5.2 chr1 15586136 15603626 - antisense NOVEL OTTHUMG00000002359.1 17491 2845 2 ENSG00000225486.1 RP11-301G21.1 chr1 233836080 233836432 - processed_pseudogene KNOWN OTTHUMG00000037922.1 353 353 1 ENSG00000265472.1 RP11-28O3.1 chr18 67707929 67708246 - processed_pseudogene KNOWN OTTHUMG00000178541.1 318 318 1 ENSG00000264104.1 RP11-638L3.4 chr18 67788268 67791035 - processed_pseudogene KNOWN OTTHUMG00000178542.1 2768 2484 2 ENSG00000265555.1 RP11-638L3.3 chr18 67808505 67814822 - lincRNA NOVEL OTTHUMG00000178543.1 6318 2149 2 ENSG00000265240.1 RP11-638L3.2 chr18 67830671 67831967 - processed_pseudogene KNOWN OTTHUMG00000178544.1 1297 1297 1 ENSG00000264634.1 RP11-659F24.1 chr18 67940949 67956426 + lincRNA NOVEL OTTHUMG00000178545.1 15478 440 3 ENSG00000264869.1 RP11-526H11.1 chr18 68102116 68114377 + lincRNA NOVEL OTTHUMG00000178546.1 12262 346 4 ENSG00000264699.1 RP11-421N8.2 chr18 68258339 68264827 - lincRNA NOVEL OTTHUMG00000178547.1 6489 496 5 ENSG00000260747.1 RP11-421N8.1 chr18 68277802 68278243 - processed_pseudogene KNOWN OTTHUMG00000177069.1 442 442 1 ENSG00000265425.1 RP11-128D14.1 chr18 68427030 68436918 + lincRNA NOVEL OTTHUMG00000178548.1 9889 755 4 ENSG00000263355.1 AKR1B10P2 chr18 68455951 68456877 + processed_pseudogene KNOWN OTTHUMG00000178549.1 927 927 1 ENSG00000183780.11 SLC35F3 chr1 233904933 234324516 + protein_coding KNOWN OTTHUMG00000037929.2 419584 3195 15 ENSG00000264697.1 RP11-585K6.2 chr18 68527970 68528123 + processed_pseudogene KNOWN OTTHUMG00000178550.1 154 154 1 ENSG00000166479.8 TMX3 chr18 68673688 68715298 - protein_coding KNOWN OTTHUMG00000172713.3 41611 7637 97 ENSG00000150636.14 CCDC102B chr18 68715209 69055189 + protein_coding KNOWN OTTHUMG00000132808.3 339981 5807 63 ENSG00000276092.1 RP11-734B5.2 chr18 68721082 68721560 + sense_intronic NOVEL OTTHUMG00000186668.1 479 479 1 ENSG00000263637.1 RP11-106E15.1 chr18 68753179 68754583 - antisense NOVEL OTTHUMG00000178551.1 1405 302 2 ENSG00000207072.1 RNU6-39P chr18 68858934 68859040 + snRNA KNOWN NA 107 107 1 ENSG00000264444.1 SDHCP1 chr18 68866517 68867028 + processed_pseudogene KNOWN OTTHUMG00000178552.1 512 512 1 ENSG00000264472.3 RP11-861L17.3 chr18 68899781 68902255 - antisense NOVEL OTTHUMG00000178553.1 2475 559 4 ENSG00000273584.1 RP11-861L17.4 chr18 68908048 68908599 + sense_intronic NOVEL OTTHUMG00000186669.1 552 552 1 ENSG00000264236.1 RP11-861L17.2 chr18 68992718 68993375 - processed_pseudogene KNOWN OTTHUMG00000178554.1 658 658 1 ENSG00000236101.1 RAC1P7 chr1 234026851 234027227 - processed_pseudogene KNOWN OTTHUMG00000057831.1 377 377 1 ENSG00000264705.1 RP11-674P19.2 chr18 69212277 69214350 + lincRNA NOVEL OTTHUMG00000178555.1 2074 2074 1 ENSG00000278532.1 RP11-17E3.1 chr18 69398726 69399249 - lincRNA NOVEL OTTHUMG00000186670.1 524 524 1 ENSG00000206052.9 DOK6 chr18 69401055 69849087 + protein_coding KNOWN OTTHUMG00000178688.1 448033 9387 23 ENSG00000264845.2 RP11-465I4.3 chr18 69469517 69471736 + transcribed_processed_pseudogene KNOWN OTTHUMG00000178689.2 2220 612 4 ENSG00000265643.1 RP11-465I4.2 chr18 69483627 69618694 - antisense NOVEL OTTHUMG00000178690.1 135068 432 3 ENSG00000279221.1 RP11-543H23.1 chr18 69659837 69663413 + TEC KNOWN OTTHUMG00000178691.1 3577 3577 1 ENSG00000266840.1 RP11-543H23.2 chr18 69704978 69724975 - antisense NOVEL OTTHUMG00000178692.1 19998 483 3 ENSG00000150637.7 CD226 chr18 69831158 69961803 - protein_coding KNOWN OTTHUMG00000132809.4 130646 13638 41 ENSG00000176225.11 RTTN chr18 70003793 70205945 - protein_coding KNOWN OTTHUMG00000178694.1 202153 9042 184 ENSG00000170677.5 SOCS6 chr18 70288901 70330200 + protein_coding KNOWN OTTHUMG00000132816.2 41300 5984 6 ENSG00000233332.1 RP4-799P18.2 chr1 234212606 234215088 - antisense NOVEL OTTHUMG00000040084.1 2483 1723 2 ENSG00000266258.1 RP11-41O4.1 chr18 70335439 70352459 + lincRNA NOVEL OTTHUMG00000178695.1 17021 1040 8 ENSG00000266304.1 RP11-484N16.1 chr18 70335929 70337310 - lincRNA NOVEL OTTHUMG00000178698.1 1382 384 2 ENSG00000266278.1 RP11-41O4.2 chr18 70380140 70384591 - lincRNA NOVEL OTTHUMG00000178696.1 4452 2637 3 ENSG00000265698.1 LARP7P3 chr18 70412055 70412391 + processed_pseudogene KNOWN OTTHUMG00000178697.1 337 337 1 ENSG00000214255.5 RPS2P6 chr18 70430231 70431125 + processed_pseudogene KNOWN OTTHUMG00000158263.1 895 895 1 ENSG00000278971.1 RP11-644A7.2 chr18 70489630 70491205 + TEC KNOWN OTTHUMG00000178786.1 1576 1576 1 ENSG00000239748.3 RN7SL795P chr18 70512727 70513008 + misc_RNA KNOWN NA 282 282 1 ENSG00000263417.4 GTSCR1 chr18 70630534 70650744 - lincRNA KNOWN OTTHUMG00000178787.2 20211 470 3 ENSG00000265781.1 RP11-384E22.1 chr18 71000477 71011490 - lincRNA NOVEL OTTHUMG00000178788.1 11014 374 3 ENSG00000265639.1 RP11-529J17.1 chr18 71028770 71033056 + processed_pseudogene KNOWN OTTHUMG00000178789.1 4287 847 2 ENSG00000231272.1 RP4-799P18.4 chr1 234261706 234274465 + sense_intronic NOVEL OTTHUMG00000041308.1 12760 452 2 ENSG00000265484.1 RP11-47G4.2 chr18 71216704 71237102 - lincRNA NOVEL OTTHUMG00000178790.1 20399 567 4 ENSG00000263733.1 RP11-47G4.1 chr18 71225704 71226721 + processed_pseudogene KNOWN OTTHUMG00000178791.1 1018 1018 1 ENSG00000260676.4 LINC01541 chr18 71519962 71578956 - lincRNA NOVEL OTTHUMG00000176200.2 58995 3105 12 ENSG00000264388.1 RP11-752P2.1 chr18 71588537 71588884 + processed_pseudogene KNOWN OTTHUMG00000178792.1 348 348 1 ENSG00000265946.1 RP11-752P2.2 chr18 71665148 71665525 + processed_pseudogene KNOWN OTTHUMG00000178793.1 378 378 1 ENSG00000265352.1 RP11-723G8.2 chr18 71732615 71788128 - lincRNA NOVEL OTTHUMG00000178794.1 55514 1101 10 ENSG00000260457.2 RP11-723G8.1 chr18 71837039 71870788 + lincRNA NOVEL OTTHUMG00000176204.2 33750 613 2 ENSG00000265995.1 RP11-736G13.1 chr18 71890409 71944577 - lincRNA NOVEL OTTHUMG00000178795.1 54169 287 3 ENSG00000271313.1 RP11-736G13.2 chr18 71932493 71932796 + processed_pseudogene KNOWN OTTHUMG00000184853.1 304 304 1 ENSG00000141668.8 CBLN2 chr18 72536680 72638521 - protein_coding KNOWN OTTHUMG00000132825.2 101842 5593 28 ENSG00000236244.1 RP4-799P18.3 chr1 234268583 234272500 - antisense NOVEL OTTHUMG00000040085.1 3918 388 2 ENSG00000264315.1 HNRNPA1P11 chr18 72618267 72619222 + processed_pseudogene KNOWN OTTHUMG00000178796.1 956 956 1 ENSG00000166342.17 NETO1 chr18 72742314 72868146 - protein_coding KNOWN OTTHUMG00000132834.4 125833 5509 39 ENSG00000265579.1 RP11-713C5.1 chr18 72743756 72745961 - sense_intronic NOVEL OTTHUMG00000178982.1 2206 2206 1 ENSG00000252598.1 RNA5SP460 chr18 72751952 72752051 + rRNA KNOWN NA 100 100 1 ENSG00000263750.1 MIR548AV chr18 72853321 72853382 - miRNA KNOWN NA 62 62 1 ENSG00000263958.1 RP11-676J15.1 chr18 72868388 72881399 + lincRNA NOVEL OTTHUMG00000178983.1 13012 534 5 ENSG00000263711.4 RP11-169F17.1 chr18 73151241 73264480 - processed_transcript NOVEL OTTHUMG00000178984.2 113240 6856 28 ENSG00000261780.2 CTD-2354A18.1 chr18 73324941 73349878 + processed_transcript NOVEL OTTHUMG00000176206.2 24938 2275 8 ENSG00000265380.1 RP11-126K15.1 chr18 73711329 73715490 - lincRNA NOVEL OTTHUMG00000178985.1 4162 555 3 ENSG00000241866.3 RN7SL401P chr18 73744935 73745232 + misc_RNA KNOWN NA 298 298 1 ENSG00000232166.1 RP4-799P18.5 chr1 234284972 234285541 + processed_pseudogene KNOWN OTTHUMG00000157018.1 570 570 1 ENSG00000263655.1 RP11-25L3.3 chr18 73914405 74034161 - lincRNA NOVEL OTTHUMG00000178986.1 119757 493 3 ENSG00000278902.1 RP11-25L3.1 chr18 73921939 73922631 - TEC KNOWN OTTHUMG00000176207.1 693 693 1 ENSG00000141665.10 FBXO15 chr18 74073353 74147865 - protein_coding KNOWN OTTHUMG00000132842.3 74513 6198 69 ENSG00000075336.10 TIMM21 chr18 74148511 74160530 + protein_coding KNOWN OTTHUMG00000132844.3 12020 5208 24 ENSG00000260569.2 RP11-669I1.1 chr18 74211391 74240555 - lincRNA NOVEL OTTHUMG00000176208.2 29165 1463 3 ENSG00000243856.3 RN7SL551P chr18 74227506 74227803 + misc_RNA KNOWN NA 298 298 1 ENSG00000166347.17 CYB5A chr18 74250847 74292016 - protein_coding KNOWN OTTHUMG00000132843.5 41170 9313 31 ENSG00000206043.6 C18orf63 chr18 74315813 74359187 + protein_coding KNOWN OTTHUMG00000178987.2 43375 5127 14 ENSG00000235297.3 FAUP1 chr18 74389884 74390297 - processed_pseudogene KNOWN OTTHUMG00000158397.1 414 414 1 ENSG00000259779.1 RP11-231E4.2 chr18 74409415 74413209 + lincRNA NOVEL OTTHUMG00000176209.1 3795 2339 3 ENSG00000264377.1 MIR4671 chr1 234306467 234306539 + miRNA KNOWN NA 73 73 1 ENSG00000187773.8 FAM69C chr18 74434099 74457944 - protein_coding KNOWN OTTHUMG00000156984.3 23846 3843 7 ENSG00000133313.13 CNDP2 chr18 74495816 74523454 + protein_coding KNOWN OTTHUMG00000132853.4 27639 11848 141 ENSG00000276934.1 RP11-231E4.5 chr18 74504766 74505248 + sense_intronic NOVEL OTTHUMG00000186672.1 483 483 1 ENSG00000150656.13 CNDP1 chr18 74534440 74587212 + protein_coding KNOWN OTTHUMG00000132852.4 52773 7177 45 ENSG00000264340.1 RP11-231E4.3 chr18 74561381 74562100 - antisense NOVEL OTTHUMG00000179120.1 720 331 2 ENSG00000264247.1 LINC00909 chr18 74591774 74598508 - lincRNA NOVEL OTTHUMG00000179121.1 6735 3742 8 ENSG00000215421.8 ZNF407 chr18 74597870 75065671 + protein_coding KNOWN OTTHUMG00000179122.3 467802 12190 35 ENSG00000252330.2 AC023380.1 chr18 74821126 74821220 + miRNA NOVEL NA 95 95 1 ENSG00000278607.1 RP11-405M12.3 chr18 75070197 75071091 - lincRNA NOVEL OTTHUMG00000186676.1 895 555 3 ENSG00000273669.1 RP11-405M12.4 chr18 75073543 75074205 + lincRNA NOVEL OTTHUMG00000186678.1 663 663 1 ENSG00000235605.1 RP5-827C21.1 chr1 234356704 234357141 - processed_pseudogene KNOWN OTTHUMG00000037943.1 438 438 1 ENSG00000278911.1 RP11-405M12.2 chr18 75103587 75106260 - TEC KNOWN OTTHUMG00000179124.1 2674 2674 1 ENSG00000180011.6 ZADH2 chr18 75195108 75209348 - protein_coding KNOWN OTTHUMG00000132858.2 14241 8157 8 ENSG00000179981.9 TSHZ1 chr18 75210755 75289950 + protein_coding KNOWN OTTHUMG00000132859.3 79196 8281 10 ENSG00000276993.1 RP11-321M21.4 chr18 75387056 75387596 + lincRNA NOVEL OTTHUMG00000186679.1 541 541 1 ENSG00000264116.3 RP11-321M21.3 chr18 75407012 75419040 + antisense NOVEL OTTHUMG00000179125.1 12029 715 9 ENSG00000206026.6 SMIM21 chr18 75409476 75427703 - protein_coding KNOWN OTTHUMG00000179126.1 18228 4009 8 ENSG00000266774.1 RP11-321M21.1 chr18 75432703 75436957 - lincRNA NOVEL OTTHUMG00000179127.1 4255 748 2 ENSG00000261194.1 RP11-704C2.1 chr18 75696079 75712385 - lincRNA NOVEL OTTHUMG00000176210.1 16307 1903 2 ENSG00000277497.1 AC090338.1 chr18 75753580 75753665 - miRNA NOVEL NA 86 86 1 ENSG00000266460.1 RP11-173L6.1 chr18 75844925 75868252 - lincRNA NOVEL OTTHUMG00000179128.1 23328 597 2 ENSG00000236358.1 RP5-827C21.2 chr1 234357006 234365828 + antisense NOVEL OTTHUMG00000037944.1 8823 410 2 ENSG00000275827.1 RP11-1O2.2 chr18 75927836 75928004 + processed_pseudogene KNOWN OTTHUMG00000188036.1 169 169 1 ENSG00000264108.1 RP11-357H3.1 chr18 76008118 76015861 - lincRNA NOVEL OTTHUMG00000179129.1 7744 211 2 ENSG00000263547.1 RP11-1O2.1 chr18 76122998 76145255 + processed_transcript NOVEL OTTHUMG00000179130.1 22258 2936 8 ENSG00000266743.1 RP11-94B19.6 chr18 76173304 76177738 - lincRNA NOVEL OTTHUMG00000179131.1 4435 464 2 ENSG00000264260.1 RP11-94B19.1 chr18 76209510 76215702 + lincRNA NOVEL OTTHUMG00000179132.1 6193 479 4 ENSG00000264595.1 RP11-94B19.5 chr18 76227990 76233387 - lincRNA NOVEL OTTHUMG00000179133.1 5398 594 3 ENSG00000266014.1 RP11-94B19.2 chr18 76247725 76251388 + lincRNA NOVEL OTTHUMG00000179134.1 3664 391 2 ENSG00000265717.1 RP11-94B19.7 chr18 76254292 76255214 - lincRNA NOVEL OTTHUMG00000179135.1 923 598 2 ENSG00000264212.1 RP11-94B19.3 chr18 76256891 76258337 + lincRNA NOVEL OTTHUMG00000179136.1 1447 922 2 ENSG00000266614.1 RP11-94B19.4 chr18 76259166 76260114 + lincRNA NOVEL OTTHUMG00000179137.1 949 462 2 ENSG00000235084.3 CHCHD2P6 chr1 15604597 15605043 + processed_pseudogene KNOWN OTTHUMG00000002360.1 447 447 1 ENSG00000273367.1 RP5-827C21.6 chr1 234372186 234372811 + antisense NOVEL OTTHUMG00000185838.1 626 626 1 ENSG00000101493.9 ZNF516 chr18 76358190 76495190 - protein_coding KNOWN OTTHUMG00000165995.5 137001 8217 16 ENSG00000263982.1 RP11-504I13.3 chr18 76372717 76378275 + antisense NOVEL OTTHUMG00000179138.1 5559 398 2 ENSG00000280205.1 RP11-504I13.2 chr18 76385642 76389406 - TEC KNOWN OTTHUMG00000179139.1 3765 3765 1 ENSG00000265778.2 RP11-17M16.2 chr18 76491652 76493918 + antisense NOVEL OTTHUMG00000179140.2 2267 1393 3 ENSG00000275763.2 C18orf65 chr18 76495521 76498088 + protein_coding NOVEL OTTHUMG00000165996.4 2568 2076 4 ENSG00000263812.4 LINC00908 chr18 76528655 76610968 + lincRNA KNOWN OTTHUMG00000179141.1 82314 3036 16 ENSG00000266256.1 LINC00683 chr18 76615212 76625940 + lincRNA NOVEL OTTHUMG00000179274.1 10729 4928 4 ENSG00000266312.1 RP11-111H3.3 chr18 76623006 76639011 - lincRNA NOVEL OTTHUMG00000179326.1 16006 712 5 ENSG00000276397.1 AC034110.1 chr18 76690029 76693636 + lincRNA NOVEL OTTHUMG00000132860.4 3608 2338 3 ENSG00000265934.1 ARL2BPP1 chr18 76703444 76704254 - processed_pseudogene KNOWN OTTHUMG00000179327.1 811 478 2 ENSG00000231663.1 RP5-827C21.4 chr1 234372807 234373593 - antisense NOVEL OTTHUMG00000037946.1 787 575 2 ENSG00000265836.1 CCND3P2 chr18 76751305 76751841 + processed_pseudogene KNOWN OTTHUMG00000179328.1 537 537 1 ENSG00000265626.1 AC139085.2 chr18 76759685 76759866 - processed_pseudogene KNOWN OTTHUMG00000179329.1 182 182 1 ENSG00000264278.1 RP11-162A12.2 chr18 76794732 76822295 - lincRNA NOVEL OTTHUMG00000179330.1 27564 1295 3 ENSG00000252097.1 RNU6-346P chr18 76800664 76800774 - snRNA KNOWN NA 111 111 1 ENSG00000278107.1 RP11-162A12.4 chr18 76805151 76805736 - lincRNA NOVEL OTTHUMG00000186681.1 586 586 1 ENSG00000130856.14 ZNF236 chr18 76822607 76970727 + protein_coding KNOWN OTTHUMG00000179331.1 148121 8764 110 ENSG00000244229.1 RPL26P35 chr18 76834429 76834888 - processed_pseudogene KNOWN OTTHUMG00000158266.1 460 460 1 ENSG00000275355.1 Metazoa_SRP chr18 76840838 76841102 - misc_RNA NOVEL NA 265 265 1 ENSG00000265261.1 RP11-162A12.3 chr18 76884935 76888724 - processed_pseudogene KNOWN OTTHUMG00000179332.1 3790 2747 4 ENSG00000266844.1 RP11-862L9.3 chr18 76974690 76984162 + antisense NOVEL OTTHUMG00000179333.1 9473 2478 15 ENSG00000168275.13 COA6 chr1 234373456 234384049 + protein_coding KNOWN OTTHUMG00000037945.1 10594 1257 11 ENSG00000197971.13 MBP chr18 76978827 77133683 - protein_coding KNOWN OTTHUMG00000132874.7 154857 18615 232 ENSG00000279811.1 RP11-862L9.2 chr18 77002849 77006846 - TEC KNOWN OTTHUMG00000179334.1 3998 3998 1 ENSG00000275178.1 RP11-4B16.3 chr18 77093086 77093446 + antisense NOVEL OTTHUMG00000186682.2 361 361 1 ENSG00000279433.1 RP11-4B16.1 chr18 77108284 77110537 - TEC KNOWN OTTHUMG00000179335.1 2254 2254 1 ENSG00000278330.1 RP11-4B16.4 chr18 77112602 77115726 + antisense NOVEL OTTHUMG00000186683.1 3125 3125 3 ENSG00000265844.1 RP11-751H17.1 chr18 77180106 77235430 + lincRNA NOVEL OTTHUMG00000179337.1 55325 560 5 ENSG00000166573.5 GALR1 chr18 77250549 77277896 + protein_coding KNOWN OTTHUMG00000132875.3 27348 10299 5 ENSG00000264015.1 RP11-176N18.2 chr18 77421619 77560763 + lincRNA NOVEL OTTHUMG00000179338.1 139145 562 3 ENSG00000199392.1 SNORA25 chr18 77431563 77431689 - snoRNA NOVEL NA 127 127 1 ENSG00000264736.1 BDP1P chr18 77435253 77437242 - processed_pseudogene KNOWN OTTHUMG00000179339.1 1990 1990 1 ENSG00000059588.8 TARBP1 chr1 234391313 234479103 - protein_coding KNOWN OTTHUMG00000037947.3 87791 7743 66 ENSG00000264693.1 RP11-63N3.1 chr18 77622552 77624515 + lincRNA NOVEL OTTHUMG00000179340.1 1964 661 2 ENSG00000271702.1 RP11-63N3.2 chr18 77632928 77633360 - processed_pseudogene KNOWN OTTHUMG00000184869.1 433 275 2 ENSG00000252260.1 RNA5SP461 chr18 77863464 77863567 - rRNA KNOWN NA 104 104 1 ENSG00000265843.2 LINC01029 chr18 77971294 77993722 - lincRNA NOVEL OTTHUMG00000179393.2 22429 2094 10 ENSG00000264334.1 RP11-671C19.2 chr18 77983020 77986610 - lincRNA NOVEL OTTHUMG00000179394.1 3591 788 2 ENSG00000199728.1 RNU6-655P chr18 78036739 78036845 + snRNA KNOWN NA 107 107 1 ENSG00000266213.1 RP11-100K18.1 chr18 78137223 78140887 + lincRNA NOVEL OTTHUMG00000179395.1 3665 2727 2 ENSG00000265644.1 RP11-451L19.1 chr18 78480549 78484867 + lincRNA NOVEL OTTHUMG00000179396.1 4319 573 3 ENSG00000265378.1 RP11-123I22.1 chr18 78505165 78506410 + lincRNA NOVEL OTTHUMG00000179397.1 1246 397 2 ENSG00000201723.2 Y_RNA chr18 78544095 78544188 - misc_RNA NOVEL NA 94 94 1 ENSG00000231768.1 LINC01354 chr1 234527891 234531779 - lincRNA NOVEL OTTHUMG00000037976.1 3889 2870 6 ENSG00000266273.1 RP11-715C4.1 chr18 78795612 78796672 - lincRNA NOVEL OTTHUMG00000179398.1 1061 399 2 ENSG00000266586.1 CTD-2382H12.2 chr18 78908629 78918993 - lincRNA NOVEL OTTHUMG00000179399.1 10365 179 2 ENSG00000265101.1 CTD-2382H12.1 chr18 78925064 78927441 - lincRNA NOVEL OTTHUMG00000179400.1 2378 523 2 ENSG00000263146.2 RP11-849I19.1 chr18 78976555 78979074 - lincRNA NOVEL OTTHUMG00000178053.2 2520 1732 8 ENSG00000256463.7 SALL3 chr18 78980275 79002677 + protein_coding KNOWN OTTHUMG00000132896.4 22403 7397 20 ENSG00000166377.18 ATP9B chr18 79069285 79378283 + protein_coding KNOWN OTTHUMG00000132898.4 308999 14930 203 ENSG00000279416.1 RP11-849I19.2 chr18 79085134 79086435 + TEC KNOWN OTTHUMG00000180260.1 1302 1302 1 ENSG00000267655.1 CTD-2286N8.2 chr18 79117207 79117920 + sense_intronic NOVEL OTTHUMG00000180261.1 714 714 1 ENSG00000279474.1 CTD-2286N8.1 chr18 79144752 79146918 + TEC KNOWN OTTHUMG00000180262.1 2167 2167 1 ENSG00000267628.1 RP11-1136J12.1 chr18 79253577 79254856 - antisense NOVEL OTTHUMG00000180263.1 1280 728 2 ENSG00000230404.1 RP5-855F14.2 chr1 234565298 234570088 + lincRNA NOVEL OTTHUMG00000037977.1 4791 390 2 ENSG00000267015.1 RP11-800A18.4 chr18 79340258 79343972 - antisense NOVEL OTTHUMG00000180264.1 3715 502 2 ENSG00000279077.1 RP11-800A18.3 chr18 79352458 79354567 + TEC KNOWN OTTHUMG00000180265.1 2110 2110 1 ENSG00000131196.16 NFATC1 chr18 79395856 79529325 + protein_coding KNOWN OTTHUMG00000132897.4 133470 9068 122 ENSG00000279637.1 RP11-196B3.1 chr18 79420836 79422780 + TEC KNOWN OTTHUMG00000180267.1 1945 1945 1 ENSG00000275186.1 RP11-196B3.3 chr18 79470120 79470940 - antisense NOVEL OTTHUMG00000186684.1 821 568 2 ENSG00000279981.1 RP11-196B3.2 chr18 79496058 79498348 + TEC KNOWN OTTHUMG00000180268.1 2291 2291 1 ENSG00000279397.1 RP11-196B3.4 chr18 79515798 79516057 - TEC KNOWN OTTHUMG00000187006.1 260 260 1 ENSG00000267287.1 RP11-567M16.1 chr18 79576460 79589010 + processed_transcript NOVEL OTTHUMG00000180269.1 12551 6158 5 ENSG00000267409.1 RP11-567M16.2 chr18 79610747 79612303 + lincRNA NOVEL OTTHUMG00000180270.1 1557 585 2 ENSG00000178412.4 RP11-567M16.3 chr18 79638928 79679745 - lincRNA NOVEL OTTHUMG00000180271.2 40818 1111 5 ENSG00000212144.1 U8 chr1 234593275 234593402 + snoRNA NOVEL NA 128 128 1 ENSG00000274828.1 RP11-567M16.6 chr18 79677287 79679358 - lincRNA NOVEL OTTHUMG00000186685.1 2072 2072 1 ENSG00000060069.15 CTDP1 chr18 79679801 79756623 + protein_coding KNOWN OTTHUMG00000132920.3 76823 7415 62 ENSG00000266901.1 RP11-567M16.5 chr18 79702721 79703651 - antisense NOVEL OTTHUMG00000180273.1 931 474 2 ENSG00000266924.1 RP11-154H12.2 chr18 79787121 79791432 + lincRNA NOVEL OTTHUMG00000180297.1 4312 636 2 ENSG00000267780.2 RP11-154H12.3 chr18 79792726 79816529 + lincRNA NOVEL OTTHUMG00000180298.2 23804 527 2 ENSG00000178342.4 KCNG2 chr18 79863668 79900184 + protein_coding KNOWN OTTHUMG00000044541.2 36517 2162 4 ENSG00000278075.1 RP11-248M19.1 chr18 79900555 79900903 - lincRNA NOVEL OTTHUMG00000186688.1 349 349 1 ENSG00000122490.17 PQLC1 chr18 79902420 79951664 - protein_coding KNOWN OTTHUMG00000132921.5 49245 5225 69 ENSG00000226742.3 HSBP1L1 chr18 79964561 79970822 + protein_coding KNOWN OTTHUMG00000180375.1 6262 2056 13 ENSG00000141759.13 TXNL4A chr18 79970811 80033949 - protein_coding KNOWN OTTHUMG00000180376.2 63139 5231 36 ENSG00000168264.9 IRF2BP2 chr1 234604269 234609525 - protein_coding KNOWN OTTHUMG00000037981.1 5257 4724 6 ENSG00000267127.5 RP11-795F19.5 chr18 80034346 80097088 + protein_coding NOVEL OTTHUMG00000180377.2 62743 3902 20 ENSG00000101546.11 RBFA chr18 80034358 80046397 + protein_coding KNOWN OTTHUMG00000132923.2 12040 3722 20 ENSG00000261126.6 RP11-795F19.1 chr18 80046900 80095482 + lincRNA NOVEL OTTHUMG00000176254.3 48583 6623 16 ENSG00000266909.1 SLC25A6P4 chr18 80077707 80078259 + processed_pseudogene KNOWN OTTHUMG00000180378.1 553 553 1 ENSG00000101544.7 ADNP2 chr18 80109031 80147523 + protein_coding KNOWN OTTHUMG00000172535.3 38493 5893 18 ENSG00000267270.4 PARD6G-AS1 chr18 80147924 80178432 + antisense KNOWN OTTHUMG00000180379.2 30509 4589 13 ENSG00000178184.14 PARD6G chr18 80157232 80247546 - protein_coding KNOWN OTTHUMG00000132922.3 90315 4224 9 ENSG00000278000.1 AC139100.4 chr18 80161752 80162413 + sense_intronic NOVEL OTTHUMG00000186689.1 662 662 1 ENSG00000267251.2 AC139100.3 chr18 80183680 80202992 + antisense NOVEL OTTHUMG00000180380.2 19313 2232 6 ENSG00000275604.1 MIR1302-11 chr19 71973 72110 + miRNA KNOWN NA 138 138 1 ENSG00000228830.1 RP4-781K5.2 chr1 234607008 234609483 + antisense NOVEL OTTHUMG00000037978.1 2476 693 2 ENSG00000267310.1 OR4G1P chr19 104535 105471 + unprocessed_pseudogene KNOWN OTTHUMG00000180453.1 937 937 1 ENSG00000176695.6 OR4F17 chr19 107461 111696 + protein_coding KNOWN OTTHUMG00000180454.2 4236 1179 4 ENSG00000267792.1 WBP1LP11 chr19 145485 145812 + processed_pseudogene KNOWN OTTHUMG00000180455.1 328 328 1 ENSG00000266971.1 OR4F8P chr19 156279 157215 - unprocessed_pseudogene KNOWN OTTHUMG00000180456.1 937 937 1 ENSG00000281379.1 AC092299.1 chr19 182578 195853 - protein_coding NOVEL NA 13276 723 4 ENSG00000222329.1 RNU6-1076P chr19 223158 223261 - snRNA KNOWN NA 104 104 1 ENSG00000271846.1 CTD-3113P16.9 chr19 259260 259346 - processed_pseudogene KNOWN OTTHUMG00000185774.1 87 87 1 ENSG00000267447.1 VN2R11P chr19 279495 280170 + processed_pseudogene KNOWN OTTHUMG00000180529.1 676 676 1 ENSG00000141934.8 PPAP2C chr19 281040 291504 - protein_coding KNOWN OTTHUMG00000180530.6 10465 6993 30 ENSG00000105556.9 MIER2 chr19 305573 344807 - protein_coding KNOWN OTTHUMG00000180532.6 39235 3770 47 ENSG00000224939.1 LINC00184 chr1 234629311 234634780 + lincRNA KNOWN OTTHUMG00000037979.1 5470 2270 2 ENSG00000267124.2 CTD-3113P16.5 chr19 305573 306467 + antisense NOVEL OTTHUMG00000180531.1 895 542 2 ENSG00000105549.9 THEG chr19 361750 376013 - protein_coding KNOWN OTTHUMG00000165491.4 14264 2070 23 ENSG00000267443.2 AC010641.1 chr19 397589 399173 + lincRNA NOVEL OTTHUMG00000180533.2 1585 529 2 ENSG00000183186.6 C2CD4C chr19 405438 409139 - protein_coding KNOWN OTTHUMG00000180534.2 3702 3098 2 ENSG00000129946.9 SHC2 chr19 416583 460996 - protein_coding KNOWN OTTHUMG00000180545.8 44414 4789 49 ENSG00000252539.1 RNA5SP462 chr19 453134 453245 + rRNA KNOWN NA 112 112 1 ENSG00000181781.8 ODF3L2 chr19 463346 474983 - protein_coding KNOWN OTTHUMG00000180547.3 11638 1739 10 ENSG00000099866.13 MADCAM1 chr19 489176 505343 + protein_coding KNOWN OTTHUMG00000180548.5 16168 2651 53 ENSG00000266933.2 AC005775.2 chr19 490046 507833 - antisense NOVEL OTTHUMG00000180556.2 17788 850 3 ENSG00000141933.8 TPGS1 chr19 507299 519654 + protein_coding KNOWN OTTHUMG00000180557.4 12356 3840 3 ENSG00000252417.1 RNU7-179P chr1 15608078 15608145 - snRNA KNOWN NA 68 68 1 ENSG00000272362.1 RP4-781K5.9 chr1 234644666 234647571 + lincRNA NOVEL OTTHUMG00000185303.1 2906 526 2 ENSG00000099804.7 CDC34 chr19 531712 542092 + protein_coding KNOWN OTTHUMG00000180558.9 10381 1944 25 ENSG00000197540.6 GZMM chr19 544034 549924 + protein_coding KNOWN OTTHUMG00000180559.6 5891 945 10 ENSG00000267751.4 AC009005.2 chr19 567212 572228 - antisense NOVEL OTTHUMG00000180622.2 5017 863 11 ENSG00000172270.17 BSG chr19 571309 583493 + protein_coding KNOWN OTTHUMG00000177718.12 12185 3796 87 ENSG00000099822.2 HCN2 chr19 589893 617159 + protein_coding KNOWN OTTHUMG00000180590.1 27267 3408 8 ENSG00000267036.2 AC005559.3 chr19 590430 591300 - processed_pseudogene KNOWN OTTHUMG00000181755.3 871 871 1 ENSG00000099821.12 POLRMT chr19 617223 633604 - protein_coding KNOWN OTTHUMG00000180611.9 16382 5124 52 ENSG00000261204.1 AC004449.6 chr19 637105 637537 - lincRNA NOVEL OTTHUMG00000175705.1 433 433 1 ENSG00000070388.10 FGF22 chr19 639879 643703 + protein_coding KNOWN OTTHUMG00000180591.2 3825 2110 7 ENSG00000070423.16 RNF126 chr19 647526 663277 - protein_coding KNOWN OTTHUMG00000180592.7 15752 3496 51 ENSG00000228044.2 RP4-781K5.4 chr1 234646289 234683176 + lincRNA NOVEL OTTHUMG00000037980.1 36888 2201 9 ENSG00000267666.1 AC004156.3 chr19 663482 668063 + lincRNA NOVEL OTTHUMG00000180612.1 4582 1882 2 ENSG00000070404.8 FSTL3 chr19 676365 683390 + protein_coding KNOWN OTTHUMG00000180593.11 7026 3050 27 ENSG00000185198.10 PRSS57 chr19 685546 695498 - protein_coding KNOWN OTTHUMG00000180662.5 9953 1090 10 ENSG00000213726.5 RPS2P52 chr19 690353 691172 + processed_pseudogene KNOWN OTTHUMG00000157965.2 820 820 1 ENSG00000099864.16 PALM chr19 709093 748330 + protein_coding KNOWN OTTHUMG00000181785.9 39238 4752 52 ENSG00000099812.7 MISP chr19 751126 764319 + protein_coding KNOWN OTTHUMG00000181786.5 13194 2967 8 ENSG00000272473.1 AC006273.4 chr19 781002 781862 - lincRNA NOVEL OTTHUMG00000181787.1 861 861 1 ENSG00000267530.2 AC006273.5 chr19 782755 785080 + lincRNA NOVEL OTTHUMG00000181788.2 2326 870 4 ENSG00000011304.15 PTBP1 chr19 797075 812327 + protein_coding KNOWN OTTHUMG00000181789.10 15253 6883 145 ENSG00000265767.1 MIR4745 chr19 804940 805001 + miRNA KNOWN NA 62 62 1 ENSG00000241475.1 RP4-781K5.5 chr1 234660271 234667104 + lincRNA NOVEL OTTHUMG00000037982.1 6834 933 3 ENSG00000129951.17 LPPR3 chr19 812488 821977 - protein_coding KNOWN OTTHUMG00000164523.6 9490 2741 22 ENSG00000263414.1 MIR3187 chr19 813584 813653 + miRNA KNOWN NA 70 70 1 ENSG00000172232.8 AZU1 chr19 825097 832018 + protein_coding KNOWN OTTHUMG00000187023.6 6922 1783 9 ENSG00000196415.8 PRTN3 chr19 840960 848175 + protein_coding KNOWN OTTHUMG00000181838.3 7216 1146 9 ENSG00000197561.5 ELANE chr19 851014 856247 + protein_coding KNOWN OTTHUMG00000181839.4 5234 1028 11 ENSG00000197766.6 CFD chr19 859643 863630 + protein_coding KNOWN OTTHUMG00000181840.4 3988 1222 10 ENSG00000175221.13 MED16 chr19 867630 893218 - protein_coding KNOWN OTTHUMG00000181841.7 25589 4222 135 ENSG00000207507.1 RNU6-9 chr19 893484 893590 + snRNA KNOWN NA 107 107 1 ENSG00000198858.8 R3HDM4 chr19 896503 913245 - protein_coding KNOWN OTTHUMG00000181899.3 16743 2957 44 ENSG00000116014.8 KISS1R chr19 917287 921015 + protein_coding KNOWN OTTHUMG00000181900.4 3729 1680 11 ENSG00000230628.1 RP4-781K5.6 chr1 234669523 234696153 - lincRNA NOVEL OTTHUMG00000037983.1 26631 3564 2 ENSG00000116017.9 ARID3A chr19 925781 975934 + protein_coding KNOWN OTTHUMG00000182018.4 50154 7210 27 ENSG00000267159.2 AC005391.2 chr19 928259 928817 - antisense NOVEL OTTHUMG00000181902.2 559 328 2 ENSG00000275162.1 LLNLR-260G6.1 chr19 956485 958149 + sense_intronic NOVEL OTTHUMG00000186996.2 1665 341 2 ENSG00000065268.9 WDR18 chr19 984271 998438 + protein_coding KNOWN OTTHUMG00000181903.9 14168 2357 71 ENSG00000266990.1 LLNLR-284B4.2 chr19 999796 1002757 - antisense NOVEL OTTHUMG00000189099.1 2962 641 3 ENSG00000116032.5 GRIN3B chr19 1000419 1009732 + protein_coding KNOWN OTTHUMG00000181904.1 9314 3281 11 ENSG00000182087.11 TMEM259 chr19 1009648 1021179 - protein_coding KNOWN OTTHUMG00000181905.5 11532 4031 77 ENSG00000274177.1 LLNLR-284B4.1 chr19 1010221 1010907 + antisense NOVEL OTTHUMG00000186927.1 687 440 2 ENSG00000207357.1 RNU6-2 chr19 1021522 1021628 + snRNA KNOWN NA 107 107 1 ENSG00000064666.13 CNN2 chr19 1026581 1039068 + protein_coding KNOWN OTTHUMG00000172729.5 12488 3645 64 ENSG00000227630.2 LINC01132 chr1 234724042 234731643 + lincRNA NOVEL OTTHUMG00000038017.2 7602 3793 3 ENSG00000279753.1 AC011558.5 chr19 1038727 1039064 - TEC KNOWN OTTHUMG00000181870.1 338 338 1 ENSG00000064687.11 ABCA7 chr19 1040101 1065572 + protein_coding KNOWN OTTHUMG00000167547.6 25472 8367 210 ENSG00000180448.9 HMHA1 chr19 1065923 1086628 + protein_coding KNOWN OTTHUMG00000181871.4 20706 6238 180 ENSG00000099817.10 POLR2E chr19 1086579 1095380 - protein_coding KNOWN OTTHUMG00000181873.5 8802 4865 90 ENSG00000167468.15 GPX4 chr19 1103926 1106791 + protein_coding KNOWN OTTHUMG00000181874.9 2866 2019 74 ENSG00000064932.14 SBNO2 chr19 1107636 1174283 - protein_coding KNOWN OTTHUMG00000181875.5 66648 6626 136 ENSG00000118046.13 STK11 chr19 1177558 1228435 + protein_coding KNOWN OTTHUMG00000180118.7 50878 8639 56 ENSG00000267736.2 HMGB2P1 chr19 1203209 1203842 + transcribed_processed_pseudogene KNOWN OTTHUMG00000180117.3 634 634 1 ENSG00000099625.11 C19orf26 chr19 1228287 1238027 - protein_coding KNOWN OTTHUMG00000180141.5 9741 4543 37 ENSG00000267778.1 AC004221.2 chr19 1238179 1239522 + lincRNA NOVEL OTTHUMG00000180142.3 1344 844 3 ENSG00000279261.1 PP2672 chr1 234757621 234760056 - protein_coding KNOWN NA 2436 2436 1 ENSG00000099624.6 ATP5D chr19 1241746 1244826 + protein_coding KNOWN OTTHUMG00000180143.4 3081 2250 31 ENSG00000167470.11 MIDN chr19 1248553 1259140 + protein_coding KNOWN OTTHUMG00000180144.4 10588 4492 29 ENSG00000099622.12 CIRBP chr19 1259384 1274880 + protein_coding KNOWN OTTHUMG00000180145.8 15497 6368 245 ENSG00000267493.3 CIRBP-AS1 chr19 1267814 1270241 - antisense KNOWN OTTHUMG00000180146.3 2428 994 2 ENSG00000228300.12 C19orf24 chr19 1275438 1279249 + protein_coding KNOWN OTTHUMG00000153928.7 3812 2193 14 ENSG00000160953.13 MUM1 chr19 1285893 1378431 + protein_coding KNOWN OTTHUMG00000180055.6 92539 9906 117 ENSG00000099617.3 EFNA2 chr19 1286154 1300237 + protein_coding KNOWN OTTHUMG00000180148.3 14084 949 4 ENSG00000240846.2 RPS15P9 chr19 1307401 1307719 - processed_pseudogene KNOWN OTTHUMG00000157966.3 319 319 1 ENSG00000267372.2 AC005330.2 chr19 1321225 1322846 + lincRNA NOVEL OTTHUMG00000180149.5 1622 1238 2 ENSG00000279488.1 AC004623.3 chr19 1372238 1374364 - TEC KNOWN OTTHUMG00000180113.1 2127 2127 1 ENSG00000201638.2 RNY4P16 chr1 234837976 234838069 + misc_RNA KNOWN NA 94 94 1 ENSG00000267755.1 AC004623.2 chr19 1376773 1377520 - antisense NOVEL OTTHUMG00000180114.1 748 446 4 ENSG00000115286.18 NDUFS7 chr19 1383527 1395589 + protein_coding KNOWN OTTHUMG00000168077.13 12063 7533 134 ENSG00000280486.1 LLNLR-307A6.1 chr19 1386804 1389651 - antisense NOVEL OTTHUMG00000186820.2 2848 1366 3 ENSG00000248015.5 AC005329.7 chr19 1392170 1396467 - antisense NOVEL OTTHUMG00000168079.3 4298 3571 9 ENSG00000130005.10 GAMT chr19 1397084 1401570 - protein_coding KNOWN OTTHUMG00000180095.3 4487 1743 16 ENSG00000071626.15 DAZAP1 chr19 1407569 1435687 + protein_coding KNOWN OTTHUMG00000180058.8 28119 9201 91 ENSG00000115268.8 RPS15 chr19 1438358 1440494 + protein_coding KNOWN OTTHUMG00000140099.9 2137 2137 50 ENSG00000268798.1 CTB-25B13.5 chr19 1440839 1441938 + lincRNA NOVEL OTTHUMG00000180070.4 1100 1100 1 ENSG00000115266.10 APC2 chr19 1446302 1473244 + protein_coding KNOWN OTTHUMG00000180059.10 26943 12610 87 ENSG00000267317.2 CTB-25B13.12 chr19 1457670 1458580 - antisense NOVEL OTTHUMG00000180060.7 911 911 1 ENSG00000239690.3 RN7SL668P chr1 234904186 234904488 + misc_RNA KNOWN NA 303 303 1 ENSG00000119559.14 C19orf25 chr19 1461143 1479556 - protein_coding KNOWN OTTHUMG00000180092.5 18414 5111 34 ENSG00000115257.14 PCSK4 chr19 1481428 1490752 - protein_coding KNOWN OTTHUMG00000128541.4 9325 3792 96 ENSG00000115255.9 REEP6 chr19 1490747 1497927 + protein_coding KNOWN OTTHUMG00000180072.4 7181 2449 18 ENSG00000185761.9 ADAMTSL5 chr19 1505018 1513604 - protein_coding KNOWN OTTHUMG00000180093.4 8587 3625 80 ENSG00000267092.2 CTB-25B13.9 chr19 1508375 1508963 + antisense NOVEL OTTHUMG00000180080.2 589 457 2 ENSG00000185988.10 PLK5 chr19 1524074 1535456 + protein_coding KNOWN OTTHUMG00000180073.3 11383 2353 37 ENSG00000266399.1 AC027307.2 chr19 1553981 1554032 - miRNA NOVEL NA 52 52 1 ENSG00000181588.16 MEX3D chr19 1554669 1568058 - protein_coding KNOWN OTTHUMG00000150369.6 13390 2850 5 ENSG00000222720.1 AC027307.1 chr19 1556605 1556686 + miRNA NOVEL NA 82 82 1 ENSG00000239367.2 RN7SL477P chr19 1570575 1570860 - misc_RNA KNOWN NA 286 286 1 ENSG00000237520.1 RP11-443B7.2 chr1 234957231 234959989 + lincRNA NOVEL OTTHUMG00000038015.1 2759 423 2 ENSG00000071655.16 MBD3 chr19 1573596 1592801 - protein_coding KNOWN OTTHUMG00000180081.7 19206 7845 53 ENSG00000279009.1 AC005943.6 chr19 1576939 1577086 + TEC KNOWN OTTHUMG00000186645.1 148 148 1 ENSG00000267059.2 UQCR11 chr19 1578339 1605445 - protein_coding NOVEL OTTHUMG00000180082.1 27107 1002 7 ENSG00000127540.10 UQCR11 chr19 1597172 1605490 - protein_coding KNOWN OTTHUMG00000180084.5 8319 2151 15 ENSG00000071564.13 TCF3 chr19 1609290 1652605 - protein_coding KNOWN OTTHUMG00000180031.10 43316 6080 184 ENSG00000252933.1 RNU6-1223P chr19 1616492 1616595 - snRNA KNOWN NA 104 104 1 ENSG00000275642.1 Metazoa_SRP chr19 1724115 1724395 + misc_RNA NOVEL NA 281 281 1 ENSG00000267073.1 AC005256.1 chr19 1748056 1748745 + lincRNA NOVEL OTTHUMG00000179989.1 690 458 4 ENSG00000205922.4 ONECUT3 chr19 1752373 1780988 + protein_coding KNOWN OTTHUMG00000172429.1 28616 8318 2 ENSG00000130270.15 ATP8B3 chr19 1782075 1812276 - protein_coding KNOWN OTTHUMG00000166189.11 30202 7014 128 ENSG00000238005.2 RP11-443B7.1 chr1 234957342 234970062 - lincRNA NOVEL OTTHUMG00000038014.2 12721 1666 14 ENSG00000079313.10 REXO1 chr19 1815246 1848463 - protein_coding KNOWN OTTHUMG00000179991.3 33218 5199 43 ENSG00000267007.1 CTB-31O20.3 chr19 1815249 1815873 + antisense NOVEL OTTHUMG00000179990.1 625 447 2 ENSG00000223244.1 MIR1909 chr19 1816159 1816238 - miRNA KNOWN NA 80 80 1 ENSG00000267244.4 CTB-31O20.4 chr19 1822089 1824542 + processed_transcript NOVEL OTTHUMG00000179992.3 2454 2454 9 ENSG00000267125.2 CTB-31O20.6 chr19 1852382 1853622 + antisense NOVEL OTTHUMG00000179993.2 1241 500 2 ENSG00000129911.7 KLF16 chr19 1852399 1863568 - protein_coding KNOWN OTTHUMG00000179994.2 11170 2955 10 ENSG00000267141.1 CTB-31O20.8 chr19 1860250 1862019 + antisense NOVEL OTTHUMG00000179995.1 1770 607 3 ENSG00000261526.2 CTB-31O20.2 chr19 1874871 1876169 - lincRNA NOVEL OTTHUMG00000175708.2 1299 1299 1 ENSG00000267232.1 CTB-31O20.9 chr19 1875016 1875992 + lincRNA NOVEL OTTHUMG00000179996.1 977 581 2 ENSG00000129968.14 ABHD17A chr19 1876810 1885547 - protein_coding KNOWN OTTHUMG00000171872.6 8738 6139 26 ENSG00000236500.1 RP4-680D5.4 chr1 15614643 15614867 - processed_pseudogene KNOWN OTTHUMG00000002361.1 225 225 1 ENSG00000258082.1 RP11-443B7.3 chr1 234979647 234980804 - lincRNA NOVEL OTTHUMG00000170191.1 1158 846 2 ENSG00000227500.8 SCAMP4 chr19 1905214 1926013 + protein_coding KNOWN OTTHUMG00000154590.26 20800 6953 60 ENSG00000213638.5 ADAT3 chr19 1905378 1913447 + protein_coding KNOWN OTTHUMG00000154591.26 8070 2237 4 ENSG00000133275.14 CSNK1G2 chr19 1941149 1981338 + protein_coding KNOWN OTTHUMG00000180016.3 40190 3804 56 ENSG00000180846.7 CSNK1G2-AS1 chr19 1952531 1954586 - antisense KNOWN OTTHUMG00000179999.1 2056 1346 7 ENSG00000133243.7 BTBD2 chr19 1985438 2034881 - protein_coding KNOWN OTTHUMG00000180017.4 49444 5944 50 ENSG00000267283.1 AC005306.3 chr19 1989401 1990370 + processed_transcript NOVEL OTTHUMG00000180018.1 970 935 3 ENSG00000279653.1 LLNLR-304A6.1 chr19 2002580 2003581 - TEC KNOWN OTTHUMG00000186534.1 1002 1002 1 ENSG00000275468.1 LLNLR-304A6.2 chr19 2013728 2014656 - processed_pseudogene KNOWN OTTHUMG00000186766.1 929 929 1 ENSG00000267180.1 AC007136.1 chr19 2030853 2031051 - transcribed_processed_pseudogene KNOWN OTTHUMG00000180019.1 199 199 1 ENSG00000099875.13 MKNK2 chr19 2037465 2051244 - protein_coding KNOWN OTTHUMG00000180020.5 13780 5221 90 ENSG00000280587.1 LINC01348 chr1 235065479 235074220 - lincRNA KNOWN OTTHUMG00000189738.1 8742 3262 3 ENSG00000172081.12 MOB3A chr19 2071038 2096673 - protein_coding KNOWN OTTHUMG00000180353.2 25636 4149 28 ENSG00000099840.12 IZUMO4 chr19 2096429 2099593 + protein_coding KNOWN OTTHUMG00000141290.5 3165 2770 83 ENSG00000065000.14 AP3D1 chr19 2100988 2164465 - protein_coding KNOWN OTTHUMG00000180354.4 63478 8601 119 ENSG00000104885.16 DOT1L chr19 2164149 2232578 + protein_coding KNOWN OTTHUMG00000150431.5 68430 11272 66 ENSG00000267122.1 AC004490.1 chr19 2212029 2215565 - antisense NOVEL OTTHUMG00000180412.1 3537 2738 2 ENSG00000104886.8 PLEKHJ1 chr19 2230084 2237704 - protein_coding KNOWN OTTHUMG00000180425.4 7621 4655 58 ENSG00000221411.1 MIR1227 chr19 2234062 2234149 - miRNA KNOWN NA 88 88 1 ENSG00000276587.1 MIR6789 chr19 2235829 2235926 - miRNA KNOWN NA 98 98 1 ENSG00000104897.8 SF3A2 chr19 2236504 2248679 + protein_coding KNOWN OTTHUMG00000180414.4 12176 3134 36 ENSG00000104899.5 AMH chr19 2249309 2252073 + protein_coding KNOWN OTTHUMG00000180415.4 2765 2587 10 ENSG00000233018.1 RP4-597N16.1 chr1 235097187 235097412 - processed_pseudogene KNOWN OTTHUMG00000039618.1 226 226 1 ENSG00000267021.1 MIR4321 chr19 2250639 2250718 + miRNA KNOWN NA 80 80 1 ENSG00000167476.9 JSRP1 chr19 2252252 2269759 - protein_coding KNOWN OTTHUMG00000180413.3 17508 1950 14 ENSG00000104904.11 OAZ1 chr19 2269509 2273490 + protein_coding KNOWN OTTHUMG00000178459.9 3982 3436 39 ENSG00000273734.1 LLfos-48D6.2 chr19 2269525 2341172 + protein_coding NOVEL OTTHUMG00000186732.3 71648 1268 8 ENSG00000188305.5 C19orf35 chr19 2274622 2282176 - protein_coding KNOWN OTTHUMG00000178460.3 7555 2574 4 ENSG00000220008.3 LINGO3 chr19 2289784 2292024 - protein_coding KNOWN OTTHUMG00000180418.2 2241 2241 1 ENSG00000130332.13 LSM7 chr19 2321517 2328620 - protein_coding KNOWN OTTHUMG00000180441.4 7104 1698 22 ENSG00000005206.15 SPPL2B chr19 2328615 2354806 + protein_coding KNOWN OTTHUMG00000180443.8 26192 7130 92 ENSG00000178297.11 TMPRSS9 chr19 2389771 2426239 + protein_coding KNOWN OTTHUMG00000180431.4 36469 4195 48 ENSG00000099800.6 TIMM13 chr19 2425624 2427894 - protein_coding KNOWN OTTHUMG00000180432.2 2271 1973 6 ENSG00000273416.1 RP4-597N16.4 chr1 235104180 235104609 - lincRNA NOVEL OTTHUMG00000185835.1 430 430 1 ENSG00000176619.9 LMNB2 chr19 2427638 2456996 - protein_coding KNOWN OTTHUMG00000150626.5 29359 5432 29 ENSG00000274304.1 MIR7108 chr19 2434914 2435000 - miRNA KNOWN NA 87 87 1 ENSG00000267201.1 AC005624.2 chr19 2458935 2462185 - lincRNA NOVEL OTTHUMG00000180433.1 3251 371 2 ENSG00000099860.7 GADD45B chr19 2476122 2478259 + protein_coding KNOWN OTTHUMG00000180434.2 2138 2138 19 ENSG00000252962.1 RNU6-993P chr19 2503047 2503141 - snRNA KNOWN NA 95 95 1 ENSG00000176533.11 GNG7 chr19 2511219 2702709 - protein_coding KNOWN OTTHUMG00000180435.2 191491 4561 11 ENSG00000105694.3 TCEB1P28 chr19 2538112 2538754 + processed_pseudogene KNOWN OTTHUMG00000180543.1 643 317 2 ENSG00000263974.2 RN7SL121P chr19 2595019 2595291 - misc_RNA KNOWN NA 273 273 1 ENSG00000267412.1 CTC-265F19.2 chr19 2610155 2611862 - sense_intronic NOVEL OTTHUMG00000180437.1 1708 1708 1 ENSG00000277904.1 MIR7850 chr19 2630715 2630793 + miRNA KNOWN NA 79 79 1 ENSG00000173726.9 TOMM20 chr1 235109336 235128936 - protein_coding KNOWN OTTHUMG00000039619.1 19601 3542 13 ENSG00000267214.1 CTC-265F19.3 chr19 2631954 2632849 + antisense NOVEL OTTHUMG00000180509.1 896 454 2 ENSG00000267749.1 CTC-265F19.1 chr19 2641838 2643853 - sense_intronic NOVEL OTTHUMG00000180438.1 2016 2016 1 ENSG00000276097.1 AC006538.8 chr19 2700689 2701266 - sense_intronic NOVEL OTTHUMG00000186546.1 578 578 1 ENSG00000176490.4 DIRAS1 chr19 2714567 2721418 - protein_coding KNOWN OTTHUMG00000180439.1 6852 3485 6 ENSG00000267001.1 AC006538.4 chr19 2717769 2740048 - protein_coding PUTATIVE OTTHUMG00000180473.1 22280 543 3 ENSG00000261342.1 AC006538.1 chr19 2727743 2729327 - sense_intronic NOVEL OTTHUMG00000175711.2 1585 1585 1 ENSG00000141873.9 SLC39A3 chr19 2732204 2740152 - protein_coding KNOWN OTTHUMG00000180440.3 7949 4552 17 ENSG00000104969.8 SGTA chr19 2754714 2783371 - protein_coding KNOWN OTTHUMG00000180474.3 28658 3801 28 ENSG00000172009.13 THOP1 chr19 2785460 2815807 + protein_coding KNOWN OTTHUMG00000180492.5 30348 7464 77 ENSG00000172006.10 ZNF554 chr19 2819874 2835773 + protein_coding KNOWN OTTHUMG00000180493.5 15900 4685 19 ENSG00000207181.1 SNORA14B chr1 235127803 235127937 - snoRNA KNOWN NA 135 135 1 ENSG00000186300.10 ZNF555 chr19 2841435 2860484 + protein_coding KNOWN OTTHUMG00000180500.4 19050 8557 12 ENSG00000267063.1 AC006130.3 chr19 2847227 2858716 - antisense NOVEL OTTHUMG00000180564.1 11490 555 2 ENSG00000172000.6 ZNF556 chr19 2867335 2883445 + protein_coding KNOWN OTTHUMG00000180501.4 16111 6574 12 ENSG00000263997.1 AC006130.1 chr19 2872345 2872430 - miRNA NOVEL NA 86 86 1 ENSG00000267398.1 AC006130.4 chr19 2874950 2875592 - processed_pseudogene KNOWN OTTHUMG00000180565.1 643 326 2 ENSG00000266938.1 AC119403.1 chr19 2896625 2897222 - processed_pseudogene KNOWN OTTHUMG00000180626.1 598 598 1 ENSG00000171970.11 ZNF57 chr19 2900898 2918476 + protein_coding KNOWN OTTHUMG00000164485.4 17579 2327 23 ENSG00000253392.2 AC006277.2 chr19 2915146 2926807 - antisense NOVEL OTTHUMG00000164508.2 11662 776 3 ENSG00000175691.8 ZNF77 chr19 2933218 2944971 - protein_coding KNOWN OTTHUMG00000180566.1 11754 2437 6 ENSG00000279452.1 AC006277.3 chr19 2949035 2950644 + TEC KNOWN OTTHUMG00000175713.1 1610 1610 1 ENSG00000188739.13 RBM34 chr1 235131183 235161457 - protein_coding KNOWN OTTHUMG00000039620.8 30275 3113 55 ENSG00000104953.17 TLE6 chr19 2977446 2995184 + protein_coding KNOWN OTTHUMG00000156793.11 17739 3652 96 ENSG00000065717.13 TLE2 chr19 2997638 3047635 - protein_coding KNOWN OTTHUMG00000180613.6 49998 4038 211 ENSG00000104964.13 AES chr19 3052910 3063107 - protein_coding KNOWN OTTHUMG00000180567.4 10198 5298 54 ENSG00000267469.1 AC005944.2 chr19 3052910 3053724 + antisense NOVEL OTTHUMG00000180706.2 815 564 2 ENSG00000088256.7 GNA11 chr19 3094410 3124004 + protein_coding KNOWN OTTHUMG00000180631.6 29595 6242 26 ENSG00000267139.1 AC005262.3 chr19 3118665 3119304 - antisense NOVEL OTTHUMG00000180634.1 640 452 2 ENSG00000267688.1 AC005262.2 chr19 3121116 3122128 - antisense NOVEL OTTHUMG00000180635.1 1013 472 3 ENSG00000266944.1 AC005262.4 chr19 3130717 3131398 + processed_pseudogene KNOWN OTTHUMG00000180670.1 682 362 2 ENSG00000060558.3 GNA15 chr19 3136193 3163769 + protein_coding KNOWN OTTHUMG00000180637.4 27577 2613 15 ENSG00000267551.3 AC005264.2 chr19 3141576 3155175 - antisense NOVEL OTTHUMG00000180671.1 13600 2319 4 ENSG00000054267.19 ARID4B chr1 235131634 235328219 - protein_coding KNOWN OTTHUMG00000039621.6 196586 11073 184 ENSG00000125910.5 S1PR4 chr19 3172346 3180332 + protein_coding KNOWN OTTHUMG00000180672.1 7987 1664 3 ENSG00000125912.9 NCLN chr19 3185563 3209575 + protein_coding KNOWN OTTHUMG00000180687.3 24013 4175 74 ENSG00000161082.11 CELF5 chr19 3224703 3297076 + protein_coding KNOWN OTTHUMG00000180693.2 72374 6024 73 ENSG00000267448.4 AC010649.1 chr19 3296765 3303003 - antisense NOVEL OTTHUMG00000180707.1 6239 460 6 ENSG00000280103.1 AC007792.1 chr19 3355554 3355955 - TEC KNOWN OTTHUMG00000180785.1 402 402 1 ENSG00000141905.16 NFIC chr19 3359563 3469217 + protein_coding KNOWN OTTHUMG00000180731.6 109655 9347 71 ENSG00000279599.1 AC005514.2 chr19 3371395 3371602 + TEC KNOWN OTTHUMG00000180786.1 208 208 1 ENSG00000095932.6 SMIM24 chr19 3473986 3480542 - protein_coding KNOWN OTTHUMG00000180761.4 6557 1498 11 ENSG00000129932.6 DOHH chr19 3490821 3500940 - protein_coding KNOWN OTTHUMG00000180762.2 10120 2387 21 ENSG00000105325.12 FZR1 chr19 3506273 3538330 + protein_coding KNOWN OTTHUMG00000180747.2 32058 5802 66 ENSG00000263439.1 MIR4753 chr1 235190034 235190116 - miRNA KNOWN NA 83 83 1 ENSG00000252408.1 SNORD38 chr19 3521248 3521320 - snoRNA NOVEL NA 73 73 1 ENSG00000161091.11 MFSD12 chr19 3538261 3574290 - protein_coding KNOWN OTTHUMG00000180766.4 36030 5277 79 ENSG00000183397.5 C19orf71 chr19 3539154 3544030 + protein_coding KNOWN OTTHUMG00000180764.1 4877 674 4 ENSG00000267436.1 AC005786.7 chr19 3544199 3557569 + antisense NOVEL OTTHUMG00000181924.1 13371 565 2 ENSG00000267231.1 AC005786.5 chr19 3558015 3558486 + lincRNA NOVEL OTTHUMG00000180787.1 472 369 2 ENSG00000279590.1 AC005786.6 chr19 3567278 3567959 - TEC KNOWN OTTHUMG00000180788.1 682 682 1 ENSG00000266959.1 AC005786.3 chr19 3568120 3568273 - processed_pseudogene KNOWN OTTHUMG00000180765.1 154 154 1 ENSG00000064961.17 HMG20B chr19 3572777 3579088 + protein_coding KNOWN OTTHUMG00000150437.5 6312 3857 76 ENSG00000179855.5 GIPC3 chr19 3585553 3593541 + protein_coding KNOWN OTTHUMG00000167425.1 7989 4335 6 ENSG00000006638.10 TBXA2R chr19 3594506 3606840 - protein_coding KNOWN OTTHUMG00000180806.2 12335 2793 11 ENSG00000280869.1 AL391994.1 chr1 235245866 235245955 - miRNA NOVEL NA 90 90 1 ENSG00000226800.5 CACTIN-AS1 chr19 3607247 3613930 + antisense KNOWN OTTHUMG00000180807.1 6684 1913 4 ENSG00000105298.12 CACTIN chr19 3610641 3626815 - protein_coding KNOWN OTTHUMG00000180808.5 16175 5952 70 ENSG00000186111.7 PIP5K1C chr19 3630183 3700479 - protein_coding KNOWN OTTHUMG00000180870.3 70297 6694 83 ENSG00000267304.1 AC004637.1 chr19 3672582 3674295 + antisense NOVEL OTTHUMG00000180871.1 1714 482 3 ENSG00000105289.13 TJP3 chr19 3708109 3750813 + protein_coding KNOWN OTTHUMG00000180872.1 42705 4217 104 ENSG00000011132.10 APBA3 chr19 3750819 3761699 - protein_coding KNOWN OTTHUMG00000180915.2 10881 5556 37 ENSG00000267205.1 AC005954.4 chr19 3753840 3756517 + antisense NOVEL OTTHUMG00000181961.1 2678 556 3 ENSG00000267138.1 AC005954.3 chr19 3754620 3756659 - sense_intronic NOVEL OTTHUMG00000181736.1 2040 337 2 ENSG00000183617.4 MRPL54 chr19 3762664 3768575 + protein_coding KNOWN OTTHUMG00000180873.1 5912 1003 5 ENSG00000173976.14 RAX2 chr19 3769089 3772221 - protein_coding KNOWN OTTHUMG00000171148.4 3133 2414 6 ENSG00000197312.10 DDI2 chr1 15617500 15669044 + protein_coding KNOWN OTTHUMG00000002381.2 51545 12136 30 ENSG00000236863.2 RPL23AP23 chr1 235295865 235296335 + processed_pseudogene KNOWN OTTHUMG00000039622.2 471 471 1 ENSG00000267148.1 AC005777.3 chr19 3775996 3776182 - unprocessed_pseudogene KNOWN OTTHUMG00000182152.1 187 187 1 ENSG00000007264.12 MATK chr19 3777970 3802129 - protein_coding KNOWN OTTHUMG00000180916.4 24160 4141 130 ENSG00000105278.9 ZFR2 chr19 3804024 3869032 - protein_coding KNOWN OTTHUMG00000180918.5 65009 5944 51 ENSG00000266989.1 FTLP5 chr19 3870991 3872107 + processed_pseudogene KNOWN OTTHUMG00000180809.1 1117 534 3 ENSG00000167654.16 ATCAY chr19 3879864 3928079 + protein_coding KNOWN OTTHUMG00000181836.4 48216 5403 50 ENSG00000266627.2 RN7SL202P chr19 3920245 3920506 - misc_RNA KNOWN NA 262 262 1 ENSG00000077009.12 NMRK2 chr19 3933103 3942416 + protein_coding KNOWN OTTHUMG00000181758.4 9314 1141 35 ENSG00000167657.10 DAPK3 chr19 3958453 3971123 - protein_coding KNOWN OTTHUMG00000181825.2 12671 3549 32 ENSG00000207733.1 MIR637 chr19 3961414 3961512 - miRNA KNOWN NA 99 99 1 ENSG00000167658.14 EEF2 chr19 3976056 3985469 - protein_coding KNOWN OTTHUMG00000181790.2 9414 4027 32 ENSG00000152904.10 GGPS1 chr1 235327350 235344532 + protein_coding KNOWN OTTHUMG00000037963.2 17183 3809 27 ENSG00000206775.1 SNORD37 chr19 3982507 3982572 - snoRNA KNOWN NA 66 66 1 ENSG00000105229.5 PIAS4 chr19 4007646 4039386 + protein_coding KNOWN OTTHUMG00000181759.2 31741 3646 29 ENSG00000178951.7 ZBTB7A chr19 4044364 4066945 - protein_coding KNOWN OTTHUMG00000181792.2 22582 5725 6 ENSG00000268670.1 CTD-2622I13.3 chr19 4061615 4062749 - sense_intronic NOVEL OTTHUMG00000181793.1 1135 684 2 ENSG00000126934.12 MAP2K2 chr19 4090321 4124129 - protein_coding KNOWN OTTHUMG00000134286.6 33809 5236 69 ENSG00000278007.1 Metazoa_SRP chr19 4127492 4127732 + misc_RNA NOVEL NA 241 241 1 ENSG00000060566.12 CREB3L3 chr19 4153601 4173054 + protein_coding KNOWN OTTHUMG00000181846.2 19454 2678 45 ENSG00000077463.13 SIRT6 chr19 4174109 4182604 - protein_coding KNOWN OTTHUMG00000181847.3 8496 2787 90 ENSG00000089847.11 ANKRD24 chr19 4183354 4224814 + protein_coding KNOWN OTTHUMG00000181865.2 41461 4474 95 ENSG00000105246.5 EBI3 chr19 4229498 4237531 + protein_coding KNOWN OTTHUMG00000181866.1 8034 1284 7 ENSG00000227962.1 RP11-382D8.3 chr1 235336806 235337087 + processed_pseudogene KNOWN OTTHUMG00000057833.1 282 282 1 ENSG00000280247.1 AC005578.3 chr19 4246339 4247358 - TEC KNOWN OTTHUMG00000181878.1 1020 1020 1 ENSG00000105248.14 CCDC94 chr19 4247079 4269090 + protein_coding KNOWN OTTHUMG00000181867.4 22012 1671 13 ENSG00000105251.9 SHD chr19 4278601 4290724 + protein_coding KNOWN OTTHUMG00000181879.2 12124 2811 20 ENSG00000167664.7 TMIGD2 chr19 4292232 4302431 - protein_coding KNOWN OTTHUMG00000181880.1 10200 1262 16 ENSG00000105255.9 FSD1 chr19 4304600 4323843 + protein_coding KNOWN OTTHUMG00000181881.4 19244 3111 72 ENSG00000178078.10 STAP2 chr19 4324043 4342786 - protein_coding KNOWN OTTHUMG00000181884.3 18744 2766 80 ENSG00000269425.1 AC007292.7 chr19 4339577 4343491 + antisense NOVEL OTTHUMG00000181964.1 3915 279 2 ENSG00000008382.14 MPND chr19 4343527 4360086 + protein_coding KNOWN OTTHUMG00000181914.2 16560 2049 78 ENSG00000269807.1 AC007292.4 chr19 4347244 4354057 - antisense NOVEL OTTHUMG00000181915.1 6814 357 2 ENSG00000267938.1 EIF1P6 chr19 4347780 4349061 - unprocessed_pseudogene KNOWN OTTHUMG00000181916.1 1282 334 4 ENSG00000230026.2 RP11-382D8.5 chr1 235361153 235362540 + processed_pseudogene KNOWN OTTHUMG00000040751.2 1388 1388 1 ENSG00000269318.1 AC007292.3 chr19 4356637 4358448 - antisense NOVEL OTTHUMG00000181917.1 1812 1812 1 ENSG00000141985.8 SH3GL1 chr19 4360370 4400547 - protein_coding KNOWN OTTHUMG00000181918.2 40178 3685 44 ENSG00000267980.1 AC007292.6 chr19 4363789 4364640 + antisense NOVEL OTTHUMG00000181919.1 852 746 2 ENSG00000276751.1 AC011498.1 chr19 4385004 4385113 + miRNA NOVEL NA 110 110 1 ENSG00000167670.14 CHAF1A chr19 4402662 4445018 + protein_coding KNOWN OTTHUMG00000181922.4 42357 4299 35 ENSG00000267255.1 CTB-50L17.5 chr19 4429689 4430934 - antisense NOVEL OTTHUMG00000181923.1 1246 569 2 ENSG00000167671.10 UBXN6 chr19 4444999 4457822 - protein_coding KNOWN OTTHUMG00000181954.5 12824 5275 51 ENSG00000266437.1 MIR4746 chr19 4445978 4446048 + miRNA KNOWN NA 71 71 1 ENSG00000267030.1 CTB-50L17.7 chr19 4447304 4448217 + antisense NOVEL OTTHUMG00000182004.1 914 540 2 ENSG00000280239.1 CTB-50L17.8 chr19 4448810 4450836 + TEC KNOWN OTTHUMG00000182005.1 2027 2027 1 ENSG00000116957.11 TBCE chr1 235367360 235448968 + protein_coding KNOWN OTTHUMG00000039987.4 81609 2568 85 ENSG00000267769.1 CTB-50L17.9 chr19 4454014 4455286 + antisense NOVEL OTTHUMG00000182006.1 1273 510 2 ENSG00000267011.4 CTB-50L17.16 chr19 4457962 4471493 - lincRNA NOVEL OTTHUMG00000182098.1 13532 837 6 ENSG00000167674.13 HDGFRP2 chr19 4472287 4502211 + protein_coding KNOWN OTTHUMG00000182007.5 29925 4299 78 ENSG00000167676.3 PLIN4 chr19 4502192 4517704 - protein_coding KNOWN OTTHUMG00000167571.1 15513 6341 6 ENSG00000214456.7 PLIN5 chr19 4522531 4535224 - protein_coding KNOWN OTTHUMG00000182008.2 12694 4815 23 ENSG00000267385.1 CTB-50L17.14 chr19 4528427 4540067 - protein_coding NOVEL OTTHUMG00000182009.1 11641 1803 4 ENSG00000171236.9 LRG1 chr19 4536409 4540474 - protein_coding KNOWN OTTHUMG00000182010.2 4066 3133 5 ENSG00000167680.14 SEMA6B chr19 4542593 4559808 - protein_coding KNOWN OTTHUMG00000182011.3 17216 4412 36 ENSG00000267408.1 CTB-50L17.2 chr19 4621194 4622307 + unprocessed_pseudogene KNOWN OTTHUMG00000181921.1 1114 486 3 ENSG00000185361.7 TNFAIP8L1 chr19 4639518 4655568 + protein_coding KNOWN OTTHUMG00000182013.1 16051 6667 5 ENSG00000229795.2 RPS21P1 chr1 235432985 235433231 + processed_pseudogene KNOWN OTTHUMG00000157020.2 247 247 1 ENSG00000074842.6 MYDGF chr19 4641374 4670370 - protein_coding KNOWN OTTHUMG00000182039.1 28997 1678 18 ENSG00000280849.1 AC005339.1 chr19 4652171 4652283 - miRNA NOVEL NA 113 113 1 ENSG00000268565.1 AC005339.2 chr19 4654964 4655524 - antisense NOVEL OTTHUMG00000182014.1 561 392 2 ENSG00000142002.15 DPP9 chr19 4675224 4724673 - protein_coding KNOWN OTTHUMG00000182040.6 49450 8324 193 ENSG00000205790.1 DPP9-AS1 chr19 4679282 4685948 + antisense NOVEL OTTHUMG00000182047.1 6667 3071 3 ENSG00000266209.1 AC005783.1 chr19 4726291 4726379 - miRNA NOVEL NA 89 89 1 ENSG00000176840.10 MIR7-3HG chr19 4769140 4772533 + lincRNA KNOWN OTTHUMG00000150589.2 3394 1124 38 ENSG00000207630.1 MIR7-3 chr19 4770670 4770779 + miRNA KNOWN NA 110 110 1 ENSG00000268536.1 AC005523.3 chr19 4785120 4791207 - lincRNA NOVEL OTTHUMG00000182050.1 6088 418 2 ENSG00000141965.4 FEM1A chr19 4791681 4801273 + protein_coding KNOWN OTTHUMG00000182048.2 9593 9593 1 ENSG00000162885.11 B3GALNT2 chr1 235449923 235504481 - protein_coding KNOWN OTTHUMG00000040468.5 54559 5702 40 ENSG00000269604.1 AC005523.2 chr19 4791745 4795559 - antisense NOVEL OTTHUMG00000182049.1 3815 3572 4 ENSG00000127666.9 TICAM1 chr19 4815932 4831704 - protein_coding KNOWN OTTHUMG00000180248.1 15773 2676 9 ENSG00000267484.1 CTC-518P12.6 chr19 4838332 4838907 + antisense NOVEL OTTHUMG00000180510.1 576 511 2 ENSG00000105355.7 PLIN3 chr19 4838341 4867768 - protein_coding KNOWN OTTHUMG00000180249.1 29428 2813 42 ENSG00000264899.1 AC027319.2 chr19 4876712 4876798 + miRNA NOVEL NA 87 87 1 ENSG00000221535.1 AC027319.1 chr19 4889203 4889298 - miRNA NOVEL NA 96 96 1 ENSG00000205784.2 ARRDC5 chr19 4890437 4902867 - protein_coding KNOWN OTTHUMG00000180250.1 12431 1638 3 ENSG00000276043.3 UHRF1 chr19 4903080 4962154 + protein_coding KNOWN OTTHUMG00000180251.3 59075 5145 113 ENSG00000273632.1 AC027319.3 chr19 4920332 4920442 + miRNA NOVEL NA 111 111 1 ENSG00000263409.1 MIR4747 chr19 4932687 4932740 + miRNA KNOWN NA 54 54 1 ENSG00000238236.1 RP4-534P7.2 chr1 235519971 235520685 + processed_pseudogene KNOWN OTTHUMG00000040469.2 715 715 1 ENSG00000127663.13 KDM4B chr19 4969113 5153595 + protein_coding KNOWN OTTHUMG00000180281.3 184483 14716 132 ENSG00000105426.13 PTPRS chr19 5158495 5340803 - protein_coding KNOWN OTTHUMG00000180325.3 182309 9425 272 ENSG00000267550.1 CTC-482H14.5 chr19 5178119 5178464 + antisense NOVEL OTTHUMG00000180326.1 346 346 1 ENSG00000239524.2 RPL32P34 chr19 5277734 5278133 + processed_pseudogene KNOWN OTTHUMG00000157976.2 400 400 1 ENSG00000274447.1 LLNLR-304G9.1 chr19 5294247 5294696 + antisense NOVEL OTTHUMG00000186551.1 450 450 1 ENSG00000105428.5 ZNRF4 chr19 5455431 5456856 + protein_coding KNOWN OTTHUMG00000180356.1 1426 1426 1 ENSG00000223573.5 TINCR chr19 5558167 5568034 - lincRNA KNOWN OTTHUMG00000150390.2 9868 3925 8 ENSG00000233270.1 SNRPEP4 chr19 5576660 5576938 - processed_pseudogene KNOWN OTTHUMG00000186872.1 279 279 1 ENSG00000130254.10 SAFB2 chr19 5586999 5624046 - protein_coding KNOWN OTTHUMG00000180374.3 37048 6222 68 ENSG00000160633.11 SAFB chr19 5623035 5668478 + protein_coding KNOWN OTTHUMG00000180502.2 45444 7036 136 ENSG00000235638.1 MTND6P14 chr1 235537520 235538041 + processed_pseudogene KNOWN OTTHUMG00000040746.1 522 522 1 ENSG00000130255.11 RPL36 chr19 5674947 5691876 + protein_coding KNOWN OTTHUMG00000178585.2 16930 2272 28 ENSG00000174917.7 C19orf70 chr19 5678421 5680896 - protein_coding KNOWN OTTHUMG00000180503.2 2476 1854 22 ENSG00000167733.12 HSD11B1L chr19 5680604 5688523 + protein_coding KNOWN OTTHUMG00000178586.1 7920 2991 140 ENSG00000196365.10 LONP1 chr19 5691834 5720572 - protein_coding KNOWN OTTHUMG00000180504.3 28739 5085 155 ENSG00000174898.14 CATSPERD chr19 5720677 5778734 + protein_coding KNOWN OTTHUMG00000143036.4 58058 2741 36 ENSG00000212123.3 PRR22 chr19 5782960 5784765 - protein_coding KNOWN OTTHUMG00000180553.1 1806 1806 4 ENSG00000267157.1 CTB-54O9.9 chr19 5784005 5785619 - protein_coding PUTATIVE OTTHUMG00000180554.1 1615 581 3 ENSG00000141994.14 DUS3L chr19 5784832 5791238 - protein_coding KNOWN OTTHUMG00000162311.4 6407 3642 79 ENSG00000263995.1 AC011499.1 chr19 5822925 5823024 + miRNA NOVEL NA 100 100 1 ENSG00000171119.2 NRTN chr19 5823802 5828324 + protein_coding KNOWN OTTHUMG00000180555.2 4523 1109 2 ENSG00000231199.2 MTND5P19 chr1 235538052 235539845 - processed_pseudogene KNOWN OTTHUMG00000040745.2 1794 1794 1 ENSG00000156413.12 FUT6 chr19 5830610 5839731 - protein_coding KNOWN OTTHUMG00000167335.3 9122 4349 35 ENSG00000171124.11 FUT3 chr19 5842888 5851474 - protein_coding KNOWN OTTHUMG00000180614.1 8587 3109 29 ENSG00000267709.1 AC024592.9 chr19 5847467 5858239 + antisense NOVEL OTTHUMG00000180615.1 10773 1188 4 ENSG00000130383.7 FUT5 chr19 5865826 5870540 - protein_coding KNOWN OTTHUMG00000180616.1 4715 1992 3 ENSG00000267740.4 AC024592.12 chr19 5866171 5903787 - protein_coding NOVEL OTTHUMG00000180627.1 37617 2193 13 ENSG00000174886.11 NDUFA11 chr19 5891276 5904006 - protein_coding KNOWN OTTHUMG00000180617.2 12731 4839 20 ENSG00000266941.1 AC104532.3 chr19 5899895 5901511 + antisense NOVEL OTTHUMG00000180628.1 1617 356 4 ENSG00000267314.1 AC104532.2 chr19 5904841 5914707 + protein_coding NOVEL OTTHUMG00000180629.1 9867 580 4 ENSG00000187650.3 VMAC chr19 5904858 5910853 + protein_coding KNOWN OTTHUMG00000180618.2 5996 2254 2 ENSG00000267571.1 AC104532.4 chr19 5911578 5913899 - antisense NOVEL OTTHUMG00000180630.1 2322 589 2 ENSG00000229376.3 CICP3 chr1 722092 724903 + processed_pseudogene KNOWN OTTHUMG00000057431.3 2812 2455 2 ENSG00000215695.1 RSC1A1 chr1 15659869 15661722 + protein_coding KNOWN OTTHUMG00000067830.1 1854 1854 1 ENSG00000226663.2 MTND4P10 chr1 235540053 235541415 - processed_pseudogene KNOWN OTTHUMG00000040744.2 1363 1363 1 ENSG00000105519.11 CAPS chr19 5911707 5916208 + protein_coding KNOWN OTTHUMG00000180619.3 4502 4428 28 ENSG00000031823.13 RANBP3 chr19 5916139 5978142 - protein_coding KNOWN OTTHUMG00000180636.5 62004 7445 251 ENSG00000266983.1 CTC-232P5.1 chr19 5978403 6020363 + antisense NOVEL OTTHUMG00000180710.1 41961 639 4 ENSG00000087903.11 RFX2 chr19 5993164 6199572 - protein_coding KNOWN OTTHUMG00000180711.3 206409 9094 137 ENSG00000267262.1 CTC-232P5.3 chr19 6067953 6077119 + antisense NOVEL OTTHUMG00000180751.1 9167 567 2 ENSG00000267589.1 CTC-232P5.4 chr19 6072823 6073527 + processed_pseudogene KNOWN OTTHUMG00000180752.1 705 418 2 ENSG00000267299.1 CTB-66B24.1 chr19 6109322 6125797 + antisense NOVEL OTTHUMG00000180753.1 16476 325 2 ENSG00000130377.12 ACSBG2 chr19 6135247 6193094 + protein_coding KNOWN OTTHUMG00000180754.1 57848 3447 109 ENSG00000267415.1 CTC-503J8.2 chr19 6176256 6176442 - transcribed_processed_pseudogene KNOWN OTTHUMG00000180755.1 187 187 1 ENSG00000130382.8 MLLT1 chr19 6210379 6279948 - protein_coding KNOWN OTTHUMG00000180757.2 69570 4740 20 ENSG00000231582.2 RP11-293G6__B.4 chr1 235541412 235541706 - processed_pseudogene KNOWN OTTHUMG00000040743.2 295 295 1 ENSG00000267563.1 CTC-503J8.4 chr19 6259157 6259799 + antisense NOVEL OTTHUMG00000180758.1 643 523 2 ENSG00000280394.1 CTC-503J8.8 chr19 6263068 6263469 - TEC KNOWN OTTHUMG00000180768.1 402 402 1 ENSG00000167769.4 ACER1 chr19 6306142 6333629 - protein_coding KNOWN OTTHUMG00000180777.1 27488 1445 6 ENSG00000269802.1 CTB-180A7.3 chr19 6343761 6362149 - antisense NOVEL OTTHUMG00000180778.1 18389 559 4 ENSG00000125656.7 CLPP chr19 6361452 6368908 + protein_coding KNOWN OTTHUMG00000180779.3 7457 2276 30 ENSG00000125652.6 ALKBH7 chr19 6372433 6375251 + protein_coding KNOWN OTTHUMG00000180792.2 2819 1455 12 ENSG00000125650.4 PSPN chr19 6375148 6379058 - protein_coding KNOWN OTTHUMG00000168086.2 3911 3911 3 ENSG00000125651.12 GTF2F1 chr19 6379569 6393981 - protein_coding KNOWN OTTHUMG00000168087.2 14413 3134 51 ENSG00000269444.1 CTB-180A7.6 chr19 6386762 6390400 - sense_overlapping NOVEL OTTHUMG00000180793.1 3639 447 2 ENSG00000274390.1 MIR6885 chr19 6389638 6389703 - miRNA KNOWN NA 66 66 1 ENSG00000232714.1 MTND3P8 chr1 235541759 235542097 - processed_pseudogene KNOWN OTTHUMG00000040742.1 339 339 1 ENSG00000273758.1 MIR6790 chr19 6392921 6392983 - miRNA KNOWN NA 63 63 1 ENSG00000214347.6 CTB-180A7.8 chr19 6393809 6412404 + lincRNA NOVEL OTTHUMG00000153226.4 18596 576 5 ENSG00000088247.14 KHSRP chr19 6413348 6424794 - protein_coding KNOWN OTTHUMG00000180850.2 11447 4563 102 ENSG00000266722.1 MIR3940 chr19 6416410 6416511 - miRNA KNOWN NA 102 102 1 ENSG00000181240.12 SLC25A41 chr19 6426037 6433779 - protein_coding KNOWN OTTHUMG00000180851.2 7743 1649 23 ENSG00000125648.13 SLC25A23 chr19 6436079 6465203 - protein_coding KNOWN OTTHUMG00000180852.3 29125 4859 76 ENSG00000130545.14 CRB3 chr19 6463777 6467221 + protein_coding KNOWN OTTHUMG00000181828.1 3445 1592 16 ENSG00000205744.8 DENND1C chr19 6467207 6482557 - protein_coding KNOWN OTTHUMG00000180853.3 15351 4657 149 ENSG00000275234.1 CTD-2396E7.11 chr19 6469465 6470152 + antisense NOVEL OTTHUMG00000186556.1 688 688 1 ENSG00000104833.9 TUBB4A chr19 6494319 6502848 - protein_coding KNOWN OTTHUMG00000181829.3 8530 3466 58 ENSG00000235761.2 RP11-293G6__B.2 chr1 235542159 235542390 - processed_pseudogene KNOWN OTTHUMG00000040741.2 232 232 1 ENSG00000268191.1 CTD-2396E7.10 chr19 6494320 6495025 + antisense NOVEL OTTHUMG00000181912.1 706 520 2 ENSG00000268203.1 CTD-2396E7.9 chr19 6494320 6494805 + antisense NOVEL OTTHUMG00000181911.1 486 296 2 ENSG00000125657.4 TNFSF9 chr19 6530999 6535928 + protein_coding KNOWN OTTHUMG00000181831.2 4930 1665 3 ENSG00000268742.1 CTD-2396E7.7 chr19 6552358 6554494 - processed_pseudogene KNOWN OTTHUMG00000181832.1 2137 540 3 ENSG00000269546.1 CLIC4P2 chr19 6562123 6563848 - processed_pseudogene KNOWN OTTHUMG00000181833.1 1726 717 3 ENSG00000199223.1 Y_RNA chr19 6572956 6573057 - misc_RNA NOVEL NA 102 102 1 ENSG00000125726.9 CD70 chr19 6583183 6604103 - protein_coding KNOWN OTTHUMG00000181834.3 20921 1532 11 ENSG00000268785.1 RPL7P50 chr19 6593329 6594055 + processed_pseudogene KNOWN OTTHUMG00000157978.2 727 727 1 ENSG00000125735.9 TNFSF14 chr19 6661253 6670588 - protein_coding KNOWN OTTHUMG00000181835.2 9336 4778 9 ENSG00000125730.15 C3 chr19 6677704 6730562 - protein_coding KNOWN OTTHUMG00000150335.5 52859 8328 108 ENSG00000168243.9 GNG4 chr1 235547687 235650754 - protein_coding KNOWN OTTHUMG00000040740.2 103068 5401 17 ENSG00000276980.1 CTD-3128G10.7 chr19 6716386 6717742 - sense_intronic NOVEL OTTHUMG00000186561.1 1357 1357 1 ENSG00000125734.12 GPR108 chr19 6729914 6737603 - protein_coding KNOWN OTTHUMG00000170129.3 7690 3213 144 ENSG00000277714.1 MIR6791 chr19 6736712 6736778 - miRNA KNOWN NA 67 67 1 ENSG00000125733.16 TRIP10 chr19 6737925 6751526 + protein_coding KNOWN OTTHUMG00000150255.4 13602 3982 119 ENSG00000269680.1 CTD-3128G10.6 chr19 6748293 6751467 - antisense NOVEL OTTHUMG00000181913.1 3175 686 2 ENSG00000125731.11 SH2D3A chr19 6752160 6767588 - protein_coding KNOWN OTTHUMG00000181868.1 15429 5716 45 ENSG00000141968.6 VAV1 chr19 6772714 6857366 + protein_coding KNOWN OTTHUMG00000181965.1 84653 4305 157 ENSG00000174837.13 EMR1 chr19 6887566 6940459 + protein_coding KNOWN OTTHUMG00000181966.1 52894 3707 113 ENSG00000280091.1 CTC-312O10.3 chr19 6894994 6896832 - TEC KNOWN OTTHUMG00000181967.1 1839 1839 1 ENSG00000269385.1 CTC-312O10.2 chr19 6898299 6898686 + unprocessed_pseudogene KNOWN OTTHUMG00000181968.1 388 272 2 ENSG00000270710.1 RP11-293G6__B.8 chr1 235565761 235566937 + processed_pseudogene KNOWN OTTHUMG00000184483.1 1177 708 2 ENSG00000276568.1 Metazoa_SRP chr19 6928345 6928629 + misc_RNA NOVEL NA 285 285 1 ENSG00000268758.4 EMR4P chr19 6952500 6990846 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000177251.1 38347 2837 28 ENSG00000268845.1 RP11-1137G4.3 chr19 6953211 6954904 + antisense NOVEL OTTHUMG00000181969.1 1694 515 2 ENSG00000269761.1 RP11-1137G4.4 chr19 7005012 7006074 - processed_pseudogene KNOWN OTTHUMG00000181970.1 1063 1063 1 ENSG00000196589.5 CTB-25J19.1 chr19 7018971 7021432 - lincRNA NOVEL OTTHUMG00000181972.1 2462 774 5 ENSG00000237247.5 MBD3L5 chr19 7030577 7033011 + protein_coding KNOWN OTTHUMG00000181973.1 2435 779 5 ENSG00000205718.7 MBD3L4 chr19 7037748 7040179 - protein_coding KNOWN OTTHUMG00000181974.1 2432 775 5 ENSG00000230522.4 MBD3L2 chr19 7049321 7051735 + protein_coding KNOWN OTTHUMG00000181975.1 2415 793 5 ENSG00000182315.7 MBD3L3 chr19 7056209 7058640 - protein_coding KNOWN OTTHUMG00000181976.1 2432 775 5 ENSG00000130544.10 ZNF557 chr19 7069444 7087968 + protein_coding KNOWN OTTHUMG00000181977.2 18525 6018 16 ENSG00000227236.2 RP11-365D9.1 chr1 235614674 235616397 + processed_pseudogene KNOWN OTTHUMG00000040739.2 1724 1724 1 ENSG00000171105.12 INSR chr19 7112255 7294034 - protein_coding KNOWN OTTHUMG00000181992.2 181780 10451 65 ENSG00000266483.1 AC010311.1 chr19 7160420 7160495 - miRNA NOVEL NA 76 76 1 ENSG00000263264.1 CTB-133G6.1 chr19 7348943 7383385 + protein_coding NOVEL OTTHUMG00000177340.3 34443 1558 10 ENSG00000268861.4 CTD-2207O23.3 chr19 7380964 7472477 + protein_coding PUTATIVE OTTHUMG00000177341.2 91514 5042 45 ENSG00000267852.1 CTB-133G6.2 chr19 7390522 7395039 - antisense NOVEL OTTHUMG00000182042.1 4518 363 3 ENSG00000104880.16 ARHGEF18 chr19 7395113 7472477 + protein_coding KNOWN OTTHUMG00000177342.3 77365 6235 62 ENSG00000104883.6 PEX11G chr19 7476875 7497449 - protein_coding KNOWN OTTHUMG00000182044.1 20575 1466 21 ENSG00000198723.9 C19orf45 chr19 7492976 7508450 + protein_coding KNOWN OTTHUMG00000157183.3 15475 2912 24 ENSG00000267952.1 CTD-2207O23.12 chr19 7507052 7519622 + protein_coding KNOWN OTTHUMG00000150187.3 12571 634 5 ENSG00000198816.5 ZNF358 chr19 7515292 7521026 + protein_coding KNOWN OTTHUMG00000182582.1 5735 2072 5 ENSG00000143669.12 LYST chr1 235661041 235883640 - protein_coding KNOWN OTTHUMG00000040527.10 222600 19614 187 ENSG00000269371.1 CTD-2207O23.11 chr19 7519916 7520460 - antisense NOVEL OTTHUMG00000182382.1 545 293 2 ENSG00000090674.14 MCOLN1 chr19 7522626 7534009 + protein_coding KNOWN OTTHUMG00000182046.3 11384 3956 54 ENSG00000268614.1 CTD-2207O23.10 chr19 7533595 7540059 + protein_coding NOVEL OTTHUMG00000182093.2 6465 942 10 ENSG00000032444.14 PNPLA6 chr19 7534004 7561764 + protein_coding KNOWN OTTHUMG00000182094.1 27761 7055 266 ENSG00000076826.8 CAMSAP3 chr19 7595902 7618304 + protein_coding KNOWN OTTHUMG00000182096.3 22403 4845 44 ENSG00000273657.1 MIR6792 chr19 7617439 7617505 + miRNA KNOWN NA 67 67 1 ENSG00000076924.10 XAB2 chr19 7619525 7629565 - protein_coding KNOWN OTTHUMG00000182404.1 10041 4673 35 ENSG00000229833.8 PET100 chr19 7629737 7631956 + protein_coding KNOWN OTTHUMG00000182394.3 2220 2220 20 ENSG00000268400.4 CTD-3214H19.4 chr19 7629796 7643048 + protein_coding NOVEL OTTHUMG00000182395.1 13253 1366 25 ENSG00000174788.8 PCP2 chr19 7631611 7633748 - protein_coding KNOWN OTTHUMG00000182405.2 2138 799 8 ENSG00000235674.2 LDHAP2 chr1 235738005 235738989 + processed_pseudogene KNOWN OTTHUMG00000040747.2 985 985 1 ENSG00000268204.1 CTD-3214H19.6 chr19 7633766 7636990 - antisense NOVEL OTTHUMG00000182406.1 3225 843 2 ENSG00000076944.13 STXBP2 chr19 7636881 7647873 + protein_coding KNOWN OTTHUMG00000182396.4 10993 6040 186 ENSG00000269228.1 CTD-3214H19.12 chr19 7665717 7666476 + processed_pseudogene KNOWN OTTHUMG00000182516.1 760 458 2 ENSG00000104918.6 RETN chr19 7669044 7670454 + protein_coding KNOWN OTTHUMG00000182503.2 1411 520 9 ENSG00000183019.6 MCEMP1 chr19 7676628 7679826 + protein_coding KNOWN OTTHUMG00000182440.2 3199 1906 17 ENSG00000269711.1 CTD-3214H19.16 chr19 7678501 7682854 + protein_coding KNOWN OTTHUMG00000182441.5 4354 777 3 ENSG00000181029.8 TRAPPC5 chr19 7680843 7687703 + protein_coding KNOWN OTTHUMG00000182589.4 6861 5669 8 ENSG00000104921.13 FCER2 chr19 7688758 7702146 - protein_coding KNOWN OTTHUMG00000182517.2 13389 2451 69 ENSG00000182566.11 CLEC4G chr19 7728957 7733906 - protein_coding KNOWN OTTHUMG00000182519.2 4950 1754 29 ENSG00000090659.16 CD209 chr19 7739994 7747564 - protein_coding KNOWN OTTHUMG00000182530.2 7571 4413 64 ENSG00000229463.2 LYST-AS1 chr1 235839483 235840182 + antisense NOVEL OTTHUMG00000041434.2 700 521 2 ENSG00000242636.1 RPL21P129 chr19 7750684 7751161 + processed_pseudogene KNOWN OTTHUMG00000157980.1 478 478 1 ENSG00000104938.15 CLEC4M chr19 7763149 7769605 + protein_coding KNOWN OTTHUMG00000182432.2 6457 4066 79 ENSG00000268297.1 CLEC4GP1 chr19 7787549 7790621 + unprocessed_pseudogene KNOWN OTTHUMG00000182531.2 3073 870 9 ENSG00000269763.1 EXOSC3P2 chr19 7813615 7814425 - processed_pseudogene KNOWN OTTHUMG00000182506.1 811 497 2 ENSG00000142459.7 EVI5L chr19 7830233 7864976 + protein_coding KNOWN OTTHUMG00000182454.2 34744 6252 62 ENSG00000183248.10 PRR36 chr19 7868719 7874379 - protein_coding NOVEL OTTHUMG00000182504.7 5661 4456 12 ENSG00000268120.1 CTD-3193O13.11 chr19 7870561 7871296 + lincRNA NOVEL OTTHUMG00000182532.1 736 667 2 ENSG00000269153.1 LYPLA2P2 chr19 7879445 7880120 - processed_pseudogene KNOWN OTTHUMG00000182507.1 676 676 1 ENSG00000199900.1 RNA5SP463 chr19 7886977 7887096 - rRNA KNOWN NA 120 120 1 ENSG00000171017.9 LRRC8E chr19 7888505 7902021 + protein_coding KNOWN OTTHUMG00000182455.3 13517 4329 18 ENSG00000271742.1 RP4-680D5.9 chr1 15682873 15683128 - lincRNA NOVEL OTTHUMG00000185681.1 256 256 1 ENSG00000222831.1 MIR1537 chr1 235853000 235853060 - miRNA KNOWN NA 61 61 1 ENSG00000214248.2 CTD-3193O13.12 chr19 7898804 7903542 - antisense NOVEL OTTHUMG00000182572.2 4739 4739 1 ENSG00000076984.16 MAP2K7 chr19 7903843 7914478 + protein_coding KNOWN OTTHUMG00000137368.3 10636 5145 54 ENSG00000268149.1 CTD-3193O13.13 chr19 7912648 7913518 - antisense NOVEL OTTHUMG00000182573.1 871 438 2 ENSG00000260001.5 TGFBR3L chr19 7916145 7919097 + protein_coding KNOWN OTTHUMG00000175717.3 2953 1516 14 ENSG00000260500.1 CTD-3193O13.1 chr19 7918652 7919157 - antisense NOVEL OTTHUMG00000175718.1 506 506 1 ENSG00000104976.10 SNAPC2 chr19 7920316 7923250 + protein_coding KNOWN OTTHUMG00000182456.1 2935 2000 24 ENSG00000178531.5 CTXN1 chr19 7924485 7926166 - protein_coding KNOWN OTTHUMG00000182480.2 1682 1274 2 ENSG00000269139.2 CTD-3193O13.8 chr19 7926001 7926810 + processed_transcript NOVEL OTTHUMG00000182505.2 810 714 3 ENSG00000104980.6 TIMM44 chr19 7926718 7943920 - protein_coding KNOWN OTTHUMG00000182478.3 17203 4888 74 ENSG00000066044.12 ELAVL1 chr19 7958579 8445041 - protein_coding KNOWN OTTHUMG00000182470.3 486463 7063 31 ENSG00000206803.1 RNU6-968P chr1 235915415 235915521 + snRNA KNOWN NA 107 107 1 ENSG00000269813.1 CTD-3193O13.14 chr19 7959123 7960012 + antisense NOVEL OTTHUMG00000182574.1 890 528 2 ENSG00000267939.1 CTD-2325M2.1 chr19 8008729 8016025 + lincRNA NOVEL OTTHUMG00000182575.1 7297 421 2 ENSG00000131142.12 CCL25 chr19 8052767 8062650 + protein_coding KNOWN OTTHUMG00000141287.2 9884 989 19 ENSG00000142449.11 FBN3 chr19 8065402 8149846 - protein_coding KNOWN OTTHUMG00000182462.4 84445 10113 210 ENSG00000269651.1 CTD-3020H12.3 chr19 8173272 8175567 + unprocessed_pseudogene KNOWN OTTHUMG00000182508.2 2296 847 4 ENSG00000090661.10 CERS4 chr19 8206736 8262421 + protein_coding KNOWN OTTHUMG00000172570.4 55686 4059 111 ENSG00000271717.1 CTD-3020H12.4 chr19 8222153 8239648 - antisense NOVEL OTTHUMG00000185624.1 17496 348 2 ENSG00000167775.9 CD320 chr19 8302127 8308356 - protein_coding KNOWN OTTHUMG00000182457.2 6230 2277 23 ENSG00000167774.2 NDUFA7 chr19 8308283 8321379 - protein_coding NOVEL OTTHUMG00000182458.1 13097 580 5 ENSG00000267855.4 NDUFA7 chr19 8308768 8321396 - protein_coding KNOWN OTTHUMG00000182459.3 12629 1413 23 ENSG00000237845.1 RP5-940F7.2 chr1 235942553 235943805 - lincRNA NOVEL OTTHUMG00000041431.1 1253 740 2 ENSG00000233927.4 RPS28 chr19 8321158 8323340 + protein_coding KNOWN OTTHUMG00000182460.3 2183 2119 12 ENSG00000186994.10 KANK3 chr19 8322584 8343262 - protein_coding KNOWN OTTHUMG00000182461.2 20679 3594 34 ENSG00000265364.1 AC010323.1 chr19 8346010 8346096 - miRNA NOVEL NA 87 87 1 ENSG00000268884.1 CTD-2550O8.7 chr19 8346517 8347687 + processed_pseudogene KNOWN OTTHUMG00000182590.1 1171 594 3 ENSG00000167772.10 ANGPTL4 chr19 8363289 8374373 + protein_coding KNOWN OTTHUMG00000182273.3 11085 2482 54 ENSG00000269386.4 RAB11B-AS1 chr19 8374373 8390685 - antisense NOVEL OTTHUMG00000182274.1 16313 1156 9 ENSG00000265390.1 MIR4999 chr19 8389290 8389380 - miRNA KNOWN NA 91 91 1 ENSG00000185236.10 RAB11B chr19 8389981 8404434 + protein_coding KNOWN OTTHUMG00000182278.2 14454 2470 18 ENSG00000099785.9 MARCH2 chr19 8413270 8439017 + protein_coding KNOWN OTTHUMG00000182282.3 25748 2216 32 ENSG00000268931.1 RP11-886P16.6 chr19 8423355 8427827 - antisense NOVEL OTTHUMG00000182283.1 4473 511 2 ENSG00000229291.1 RP4-580N22.2 chr1 235957879 235971825 - lincRNA NOVEL OTTHUMG00000041435.1 13947 190 2 ENSG00000279827.1 RP11-886P16.10 chr19 8444570 8445597 - TEC KNOWN OTTHUMG00000182427.1 1028 1028 1 ENSG00000099783.10 HNRNPM chr19 8444767 8489114 + protein_coding KNOWN OTTHUMG00000182383.5 44348 5614 139 ENSG00000133246.10 PRAM1 chr19 8490056 8503112 - protein_coding KNOWN OTTHUMG00000167924.3 13057 3763 22 ENSG00000133250.12 ZNF414 chr19 8509678 8514164 - protein_coding KNOWN OTTHUMG00000182240.3 4487 2758 36 ENSG00000142347.15 MYO1F chr19 8520790 8577577 - protein_coding KNOWN OTTHUMG00000156005.5 56788 8550 148 ENSG00000268618.1 AC092316.1 chr19 8549506 8550139 + antisense NOVEL OTTHUMG00000182428.1 634 297 2 ENSG00000279396.1 AC130469.1 chr19 8575079 8576170 - TEC KNOWN OTTHUMG00000182264.1 1092 1092 1 ENSG00000142303.12 ADAMTS10 chr19 8580242 8610735 - protein_coding KNOWN OTTHUMG00000182216.8 30494 5703 151 ENSG00000267986.1 AC130469.2 chr19 8581160 8582715 + antisense NOVEL OTTHUMG00000182429.1 1556 388 2 ENSG00000268480.1 CTD-2586B10.1 chr19 8630671 8638649 + lincRNA NOVEL OTTHUMG00000182192.1 7979 478 4 ENSG00000116962.13 NID1 chr1 235975830 236065162 - protein_coding KNOWN OTTHUMG00000040071.2 89333 5864 37 ENSG00000261866.1 AC092566.1 chr19 8676844 8677068 + processed_pseudogene KNOWN OTTHUMG00000177852.1 225 225 1 ENSG00000279426.1 AC093230.2 chr19 8695721 8696321 - TEC KNOWN OTTHUMG00000182193.1 601 601 1 ENSG00000181786.4 ACTL9 chr19 8697397 8698822 - protein_coding KNOWN OTTHUMG00000182194.2 1426 1426 2 ENSG00000269244.1 RPL23AP78 chr19 8728735 8729204 - processed_pseudogene KNOWN OTTHUMG00000157985.2 470 470 1 ENSG00000181733.2 OR2Z1 chr19 8730954 8732009 + protein_coding KNOWN OTTHUMG00000182195.2 1056 1056 1 ENSG00000268922.1 CTD-2557P19.4 chr19 8778665 8778861 - processed_pseudogene KNOWN OTTHUMG00000182548.2 197 197 1 ENSG00000167785.7 ZNF558 chr19 8806170 8832328 - protein_coding KNOWN OTTHUMG00000182196.4 26159 8184 41 ENSG00000269300.1 CTD-2529P6.3 chr19 8821501 8824110 + antisense NOVEL OTTHUMG00000182197.1 2610 537 2 ENSG00000170948.3 MBD3L1 chr19 8832398 8843340 + protein_coding KNOWN OTTHUMG00000182198.2 10943 958 4 ENSG00000269400.1 CTD-2529P6.4 chr19 8833065 8833541 + sense_intronic NOVEL OTTHUMG00000182199.1 477 477 1 ENSG00000252822.1 Y_RNA chr1 236060677 236060772 + misc_RNA NOVEL NA 96 96 1 ENSG00000181143.14 MUC16 chr19 8848844 8981342 - protein_coding KNOWN OTTHUMG00000169191.3 132499 43830 196 ENSG00000267332.1 BOLA3P2 chr19 9019344 9019984 + processed_pseudogene KNOWN OTTHUMG00000179928.1 641 323 2 ENSG00000267154.1 OR1M4P chr19 9083112 9083398 - unprocessed_pseudogene KNOWN OTTHUMG00000179929.1 287 287 1 ENSG00000170929.5 OR1M1 chr19 9093179 9094213 + protein_coding KNOWN OTTHUMG00000179930.1 1035 1035 1 ENSG00000170923.2 OR7G2 chr19 9102269 9103306 - protein_coding KNOWN OTTHUMG00000179931.1 1038 1038 1 ENSG00000161807.3 OR7G1 chr19 9114828 9115763 - protein_coding KNOWN OTTHUMG00000168067.1 936 936 1 ENSG00000275787.1 OR7G15P chr19 9122160 9122492 - unprocessed_pseudogene KNOWN OTTHUMG00000187962.1 333 333 1 ENSG00000170920.2 OR7G3 chr19 9126012 9126950 - protein_coding KNOWN OTTHUMG00000165520.1 939 939 1 ENSG00000130803.13 ZNF317 chr19 9140380 9163424 + protein_coding KNOWN OTTHUMG00000179932.1 23045 5065 31 ENSG00000267418.1 TCEB1P29 chr19 9182369 9183048 - processed_pseudogene KNOWN OTTHUMG00000179933.1 680 334 2 ENSG00000235371.1 RP4-764D2.1 chr1 236110061 236112370 + processed_pseudogene KNOWN OTTHUMG00000037995.1 2310 2310 1 ENSG00000188000.3 OR7D2 chr19 9185594 9188817 + protein_coding KNOWN OTTHUMG00000179934.1 3224 3224 1 ENSG00000267775.1 OR7E16P chr19 9191286 9192170 + unprocessed_pseudogene KNOWN OTTHUMG00000179935.1 885 885 1 ENSG00000187847.3 OR7E25P chr19 9204308 9205217 + unprocessed_pseudogene KNOWN OTTHUMG00000154384.1 910 910 1 ENSG00000174667.3 OR7D4 chr19 9213850 9214871 - protein_coding KNOWN OTTHUMG00000179936.1 1022 1022 1 ENSG00000188314.3 OR7D1P chr19 9235144 9236076 + unprocessed_pseudogene KNOWN OTTHUMG00000179937.1 933 933 1 ENSG00000237521.2 OR7E24 chr19 9250930 9252479 + protein_coding KNOWN OTTHUMG00000179938.1 1550 1550 1 ENSG00000180926.6 OR7E18P chr19 9261015 9261716 - unprocessed_pseudogene KNOWN OTTHUMG00000179939.1 702 702 1 ENSG00000225980.3 OR7E19P chr19 9265440 9266283 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000179940.1 844 844 2 ENSG00000226480.1 OR7H1P chr19 9278448 9279369 - unprocessed_pseudogene KNOWN OTTHUMG00000154386.1 922 922 1 ENSG00000267510.1 CTC-325H20.4 chr19 9291515 9294482 + antisense NOVEL OTTHUMG00000180129.1 2968 405 2 ENSG00000077585.12 GPR137B chr1 236142505 236221865 + protein_coding KNOWN OTTHUMG00000037994.3 79361 2309 23 ENSG00000196110.6 ZNF699 chr19 9294275 9309838 - protein_coding KNOWN OTTHUMG00000179941.1 15564 3623 13 ENSG00000188321.12 ZNF559 chr19 9323772 9351162 + protein_coding KNOWN OTTHUMG00000179942.3 27391 4730 78 ENSG00000270011.5 ZNF559-ZNF177 chr19 9324174 9382617 + protein_coding KNOWN OTTHUMG00000183958.4 58444 4276 129 ENSG00000266912.1 CTC-325H20.2 chr19 9344784 9345898 + lincRNA NOVEL OTTHUMG00000179944.1 1115 1115 1 ENSG00000270614.1 CTC-325H20.7 chr19 9348106 9348703 - processed_pseudogene KNOWN OTTHUMG00000184871.2 598 598 1 ENSG00000188629.10 ZNF177 chr19 9363020 9382617 + protein_coding KNOWN OTTHUMG00000179943.1 19598 2755 25 ENSG00000174652.16 ZNF266 chr19 9412598 9435578 - protein_coding KNOWN OTTHUMG00000179945.1 22981 5267 52 ENSG00000198028.3 ZNF560 chr19 9466507 9498607 - protein_coding KNOWN OTTHUMG00000180130.1 32101 2836 13 ENSG00000267273.1 CTC-543D15.3 chr19 9498678 9510079 + lincRNA NOVEL OTTHUMG00000180131.1 11402 656 2 ENSG00000260112.1 CTC-543D15.1 chr19 9518150 9519341 + processed_pseudogene KNOWN OTTHUMG00000177065.2 1192 1192 1 ENSG00000086619.12 ERO1LB chr1 236215555 236281985 - protein_coding KNOWN OTTHUMG00000039955.2 66431 5361 27 ENSG00000130818.9 ZNF426 chr19 9523224 9538627 - protein_coding KNOWN OTTHUMG00000180132.2 15404 7527 26 ENSG00000278611.1 CTC-543D15.8 chr19 9538733 9539734 + lincRNA NOVEL OTTHUMG00000186586.1 1002 865 4 ENSG00000197961.10 ZNF121 chr19 9560353 9584533 - protein_coding KNOWN OTTHUMG00000180134.3 24181 7251 12 ENSG00000171469.9 ZNF561 chr19 9604680 9621399 - protein_coding KNOWN OTTHUMG00000157054.5 16720 6467 99 ENSG00000279471.1 AC008759.1 chr19 9615561 9616905 - protein_coding KNOWN NA 1345 93 2 ENSG00000267106.4 ZNF561-AS1 chr19 9621291 9645896 + processed_transcript NOVEL OTTHUMG00000180135.2 24606 4659 29 ENSG00000171466.8 ZNF562 chr19 9641808 9675086 - protein_coding KNOWN OTTHUMG00000180205.2 33279 13007 39 ENSG00000239830.1 RPS4XP22 chr19 9683294 9684073 - processed_pseudogene KNOWN OTTHUMG00000157988.1 780 780 1 ENSG00000224689.6 ZNF812 chr19 9689924 9700817 - protein_coding KNOWN OTTHUMG00000167867.2 10894 2233 20 ENSG00000277587.1 CTD-3116E22.8 chr19 9721903 9722410 + lincRNA NOVEL OTTHUMG00000186593.1 508 508 1 ENSG00000222650.1 RNU2-70P chr1 236267780 236267958 + snRNA KNOWN NA 179 179 1 ENSG00000267490.1 CTD-3116E22.6 chr19 9724008 9725086 - unprocessed_pseudogene KNOWN OTTHUMG00000180206.1 1079 983 2 ENSG00000267612.1 CTD-3116E22.7 chr19 9730853 9731943 + lincRNA NOVEL OTTHUMG00000180207.1 1091 600 2 ENSG00000196605.6 ZNF846 chr19 9751993 9793180 - protein_coding KNOWN OTTHUMG00000180208.1 41188 3912 56 ENSG00000267370.1 CTD-2623N2.3 chr19 9756152 9756863 - unprocessed_pseudogene KNOWN OTTHUMG00000180209.1 712 712 1 ENSG00000267741.1 UBE2L4 chr19 9774497 9774960 + processed_pseudogene KNOWN OTTHUMG00000180210.1 464 464 1 ENSG00000265379.1 AC008752.1 chr19 9776009 9776095 + miRNA NOVEL NA 87 87 1 ENSG00000266950.1 CTD-2623N2.5 chr19 9793621 9802301 + lincRNA NOVEL OTTHUMG00000180211.1 8681 408 2 ENSG00000127452.7 FBXL12 chr19 9810267 9827816 - protein_coding KNOWN OTTHUMG00000180212.1 17550 2913 39 ENSG00000200237.1 SNORA70 chr19 9819954 9820094 + snoRNA NOVEL NA 141 141 1 ENSG00000267119.1 RPL10P15 chr19 9820141 9820455 + processed_pseudogene KNOWN OTTHUMG00000180213.1 315 315 1 ENSG00000116786.10 PLEKHM2 chr1 15684332 15734769 + protein_coding KNOWN OTTHUMG00000003062.1 50438 4122 51 ENSG00000237922.1 RP11-478H16.1 chr1 236285976 236286960 - processed_pseudogene KNOWN OTTHUMG00000039950.1 985 656 2 ENSG00000198258.9 UBL5 chr19 9827892 9830115 + protein_coding KNOWN OTTHUMG00000180214.1 2224 1931 31 ENSG00000267289.1 CTD-2623N2.11 chr19 9834079 9835013 - lincRNA NOVEL OTTHUMG00000180387.1 935 750 2 ENSG00000127445.12 PIN1 chr19 9835257 9849682 + protein_coding KNOWN OTTHUMG00000180388.1 14426 4570 49 ENSG00000105088.7 OLFM2 chr19 9853718 9936552 - protein_coding KNOWN OTTHUMG00000180390.1 82835 2500 26 ENSG00000080573.6 COL5A3 chr19 9959561 10010471 - protein_coding KNOWN OTTHUMG00000150019.1 50911 6750 70 ENSG00000267650.1 CTD-2553C6.1 chr19 9995997 9997163 + antisense NOVEL OTTHUMG00000180391.1 1167 1167 1 ENSG00000080511.3 RDH8 chr19 10013249 10022279 + protein_coding KNOWN OTTHUMG00000180392.1 9031 2001 11 ENSG00000167798.15 C3P1 chr19 10037803 10074135 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000158555.1 36333 4617 66 ENSG00000266204.1 MIR5589 chr19 10038354 10038413 + miRNA KNOWN NA 60 60 1 ENSG00000130813.16 C19orf66 chr19 10086122 10093252 + protein_coding KNOWN OTTHUMG00000180393.1 7131 4341 62 ENSG00000186197.11 EDARADD chr1 236348262 236484914 + protein_coding KNOWN OTTHUMG00000039954.2 136653 3726 20 ENSG00000267387.1 CTD-2240E14.4 chr19 10089032 10090377 - antisense NOVEL OTTHUMG00000180394.1 1346 1346 1 ENSG00000130812.9 ANGPTL6 chr19 10092338 10102796 - protein_coding KNOWN OTTHUMG00000180395.1 10459 2181 19 ENSG00000243207.5 PPAN-P2RY11 chr19 10106223 10114780 + protein_coding KNOWN OTTHUMG00000150165.4 8558 2661 26 ENSG00000130810.18 PPAN chr19 10106289 10111634 + protein_coding KNOWN OTTHUMG00000156826.1 5346 2583 51 ENSG00000209645.1 SNORD105 chr19 10107651 10107735 + snoRNA KNOWN NA 85 85 1 ENSG00000238531.1 SNORD105B chr19 10109757 10109835 + snoRNA KNOWN NA 79 79 1 ENSG00000244165.1 P2RY11 chr19 10111538 10115372 + protein_coding KNOWN OTTHUMG00000150166.3 3835 2295 4 ENSG00000130811.9 EIF3G chr19 10115017 10119920 - protein_coding KNOWN OTTHUMG00000180396.1 4904 3598 113 ENSG00000257110.2 AC020931.1 chr19 10123043 10123134 + miRNA NOVEL NA 92 92 1 ENSG00000130816.13 DNMT1 chr19 10133345 10231286 - protein_coding KNOWN OTTHUMG00000180397.1 97942 9796 290 ENSG00000244457.2 ENO1P1 chr1 236483165 236484468 + transcribed_processed_pseudogene KNOWN OTTHUMG00000039951.2 1304 1304 1 ENSG00000267534.2 S1PR2 chr19 10221435 10231272 - protein_coding KNOWN OTTHUMG00000180399.2 9838 3582 2 ENSG00000264266.1 MIR4322 chr19 10230413 10230485 + miRNA KNOWN NA 73 73 1 ENSG00000105364.12 MRPL4 chr19 10251901 10260045 + protein_coding KNOWN OTTHUMG00000180400.1 8145 4070 76 ENSG00000266978.1 CTD-2369P2.5 chr19 10252268 10285108 - antisense NOVEL OTTHUMG00000180401.1 32841 918 3 ENSG00000267105.1 CTD-2369P2.4 chr19 10259109 10260045 - antisense NOVEL OTTHUMG00000180402.1 937 355 2 ENSG00000090339.7 ICAM1 chr19 10270835 10286615 + protein_coding KNOWN OTTHUMG00000180403.1 15781 3706 20 ENSG00000267607.1 CTD-2369P2.8 chr19 10285801 10289019 - antisense NOVEL OTTHUMG00000180404.1 3219 3219 1 ENSG00000105371.8 ICAM4 chr19 10286967 10288522 + protein_coding KNOWN OTTHUMG00000180405.1 1556 1427 8 ENSG00000105376.4 ICAM5 chr19 10289981 10296778 + protein_coding KNOWN OTTHUMG00000180406.1 6798 3906 26 ENSG00000220201.6 ZGLP1 chr19 10304803 10309880 - protein_coding KNOWN OTTHUMG00000152114.1 5078 2431 12 ENSG00000116977.17 LGALS8 chr1 236518000 236552981 + protein_coding KNOWN OTTHUMG00000039953.9 34982 9710 196 ENSG00000167807.14 CTD-2369P2.10 chr19 10305427 10316009 - protein_coding NOVEL OTTHUMG00000180407.2 10583 2090 18 ENSG00000267673.5 FDX1L chr19 10310045 10316015 - protein_coding KNOWN OTTHUMG00000141299.3 5971 1371 28 ENSG00000267303.1 CTD-2369P2.12 chr19 10315471 10320678 - protein_coding NOVEL OTTHUMG00000180408.1 5208 1850 8 ENSG00000161847.12 RAVER1 chr19 10316212 10333640 - protein_coding KNOWN OTTHUMG00000180409.2 17429 4981 75 ENSG00000274425.1 AC114271.2 chr19 10333436 10336248 + antisense NOVEL OTTHUMG00000186597.1 2813 2813 1 ENSG00000076662.8 ICAM3 chr19 10333776 10339823 - protein_coding KNOWN OTTHUMG00000180410.1 6048 2950 45 ENSG00000105397.12 TYK2 chr19 10350529 10380676 - protein_coding KNOWN OTTHUMG00000166373.2 30148 6773 145 ENSG00000105401.5 CDC37 chr19 10391134 10420121 - protein_coding KNOWN OTTHUMG00000180578.1 28988 3041 51 ENSG00000221566.1 MIR1181 chr19 10403458 10403538 - miRNA KNOWN NA 81 81 1 ENSG00000065989.14 PDE4A chr19 10416773 10469631 + protein_coding KNOWN OTTHUMG00000180411.3 52859 6646 96 ENSG00000223776.5 LGALS8-AS1 chr1 236523052 236524508 - antisense NOVEL OTTHUMG00000039952.2 1457 1457 2 ENSG00000079999.12 KEAP1 chr19 10486120 10503741 - protein_coding KNOWN OTTHUMG00000180579.2 17622 3761 33 ENSG00000267197.1 CTC-429L19.3 chr19 10490339 10491000 - sense_intronic NOVEL OTTHUMG00000180580.1 662 357 2 ENSG00000180739.13 S1PR5 chr19 10512742 10517931 - protein_coding KNOWN OTTHUMG00000180581.2 5190 2806 8 ENSG00000130734.8 ATG4D chr19 10543895 10553418 + protein_coding KNOWN OTTHUMG00000180582.1 9524 2278 75 ENSG00000238364.1 RNU7-140P chr19 10551033 10551092 - snRNA KNOWN NA 60 60 1 ENSG00000221410.1 MIR1238 chr19 10552122 10552204 + miRNA KNOWN NA 83 83 1 ENSG00000129347.18 KRI1 chr19 10553078 10566037 - protein_coding KNOWN OTTHUMG00000150343.6 12960 4267 141 ENSG00000129355.6 CDKN2D chr19 10566462 10569059 - protein_coding KNOWN OTTHUMG00000180583.1 2598 1503 5 ENSG00000129354.10 AP1M2 chr19 10572671 10587315 - protein_coding KNOWN OTTHUMG00000180584.1 14645 2214 60 ENSG00000271010.1 CTC-539A10.7 chr19 10598001 10598965 - processed_pseudogene KNOWN OTTHUMG00000184892.1 965 965 1 ENSG00000273058.2 RP11-385F5.5 chr1 236536162 236536704 - antisense NOVEL OTTHUMG00000185854.2 543 543 1 ENSG00000129353.13 SLC44A2 chr19 10602457 10644559 + protein_coding KNOWN OTTHUMG00000180585.1 42103 5216 153 ENSG00000267100.1 ILF3-AS1 chr19 10651862 10653844 - lincRNA NOVEL OTTHUMG00000180586.1 1983 1983 1 ENSG00000129351.16 ILF3 chr19 10654261 10692417 + protein_coding KNOWN OTTHUMG00000180587.1 38157 11022 228 ENSG00000213339.7 QTRT1 chr19 10701430 10713437 + protein_coding KNOWN OTTHUMG00000180588.1 12008 3430 69 ENSG00000079805.15 DNM2 chr19 10718079 10833488 + protein_coding KNOWN OTTHUMG00000180694.2 115410 13443 164 ENSG00000207972.1 MIR638 chr19 10718404 10718503 + miRNA KNOWN NA 100 100 1 ENSG00000265879.1 MIR4748 chr19 10780254 10780335 + miRNA KNOWN NA 82 82 1 ENSG00000207752.1 MIR199A1 chr19 10817426 10817496 - miRNA KNOWN NA 71 71 1 ENSG00000275640.1 MIR6793 chr19 10828973 10829035 + miRNA KNOWN NA 63 63 1 ENSG00000099203.5 TMED1 chr19 10832438 10836318 - protein_coding KNOWN OTTHUMG00000180696.1 3881 1513 24 ENSG00000230325.1 RP11-385F5.4 chr1 236540094 236550280 - antisense NOVEL OTTHUMG00000041413.1 10187 494 2 ENSG00000214212.7 C19orf38 chr19 10836575 10869790 + protein_coding KNOWN OTTHUMG00000180697.1 33216 1565 20 ENSG00000267544.1 AC007229.3 chr19 10841839 10842250 + processed_pseudogene KNOWN OTTHUMG00000180698.1 412 412 1 ENSG00000142453.10 CARM1 chr19 10871513 10923070 + protein_coding KNOWN OTTHUMG00000180699.2 51558 4455 93 ENSG00000130733.9 YIPF2 chr19 10922185 10928681 - protein_coding KNOWN OTTHUMG00000180796.2 6497 2518 75 ENSG00000142444.6 C19orf52 chr19 10928733 10933535 + protein_coding KNOWN OTTHUMG00000180700.1 4803 1863 6 ENSG00000127616.16 SMARCA4 chr19 10961001 11065395 + protein_coding KNOWN OTTHUMG00000169272.4 104395 11067 385 ENSG00000266936.1 CTC-215O4.4 chr19 11010917 11016011 - antisense NOVEL OTTHUMG00000180797.1 5095 366 2 ENSG00000276757.1 Metazoa_SRP chr19 11011708 11012006 + misc_RNA NOVEL NA 299 299 1 ENSG00000278643.1 uc_338 chr19 11033727 11033912 + misc_RNA NOVEL NA 186 186 1 ENSG00000130164.10 LDLR chr19 11089362 11133816 + protein_coding KNOWN OTTHUMG00000171935.7 44455 7718 144 ENSG00000119285.9 HEATR1 chr1 236549005 236604504 - protein_coding KNOWN OTTHUMG00000040061.3 55500 9049 98 ENSG00000273892.1 MIR6886 chr19 11113474 11113534 + miRNA KNOWN NA 61 61 1 ENSG00000161888.10 SPC24 chr19 11131520 11155808 - protein_coding KNOWN OTTHUMG00000180798.1 24289 2839 33 ENSG00000197256.9 KANK2 chr19 11164267 11197791 - protein_coding KNOWN OTTHUMG00000180799.2 33525 7638 67 ENSG00000130158.12 DOCK6 chr19 11199295 11262481 - protein_coding KNOWN OTTHUMG00000180826.1 63187 12435 129 ENSG00000267082.1 CTC-510F12.2 chr19 11203628 11216168 + antisense NOVEL OTTHUMG00000180827.1 12541 569 3 ENSG00000279807.1 CTC-510F12.3 chr19 11208195 11208702 + TEC KNOWN OTTHUMG00000180828.1 508 508 1 ENSG00000273733.1 CTC-510F12.7 chr19 11221083 11221573 + antisense NOVEL OTTHUMG00000186603.1 491 491 1 ENSG00000130173.12 C19orf80 chr19 11237450 11241943 + protein_coding KNOWN OTTHUMG00000180829.1 4494 1223 17 ENSG00000130167.12 TSPAN16 chr19 11296139 11326996 + protein_coding KNOWN OTTHUMG00000180833.1 30858 1561 35 ENSG00000267174.4 CTC-510F12.4 chr19 11300777 11324441 - 3prime_overlapping_ncrna NOVEL OTTHUMG00000180834.2 23665 685 6 ENSG00000077522.11 ACTN2 chr1 236686454 236764631 + protein_coding KNOWN OTTHUMG00000040059.2 78178 5530 89 ENSG00000105514.6 RAB3D chr19 11322046 11346270 - protein_coding KNOWN OTTHUMG00000180835.1 24225 4417 10 ENSG00000267576.1 CTC-510F12.6 chr19 11322156 11324195 + sense_intronic NOVEL OTTHUMG00000180836.1 2040 906 2 ENSG00000105518.12 TMEM205 chr19 11342776 11346518 - protein_coding KNOWN OTTHUMG00000182021.1 3743 1606 55 ENSG00000183401.10 CCDC159 chr19 11344684 11354944 + protein_coding KNOWN OTTHUMG00000182022.1 10261 4064 107 ENSG00000105520.9 LPPR2 chr19 11355386 11365698 + protein_coding NOVEL OTTHUMG00000182023.1 10313 3273 42 ENSG00000267277.1 CTD-2342J14.6 chr19 11368123 11374935 - antisense NOVEL OTTHUMG00000182024.1 6813 682 3 ENSG00000173928.2 SWSAP1 chr19 11374685 11376951 + protein_coding KNOWN OTTHUMG00000182025.1 2267 1684 2 ENSG00000187266.12 EPOR chr19 11377205 11384342 - protein_coding KNOWN OTTHUMG00000182027.3 7138 3079 58 ENSG00000205517.11 RGL3 chr19 11384341 11419342 - protein_coding KNOWN OTTHUMG00000172898.10 35002 4358 141 ENSG00000202357.1 Y_RNA chr19 11408772 11408880 + misc_RNA NOVEL NA 109 109 1 ENSG00000116984.11 MTR chr1 236795281 236903981 + protein_coding KNOWN OTTHUMG00000040060.3 108701 11374 105 ENSG00000198003.10 CCDC151 chr19 11420604 11435782 - protein_coding KNOWN OTTHUMG00000182028.2 15179 2681 54 ENSG00000130175.8 PRKCSH chr19 11435288 11450968 + protein_coding KNOWN OTTHUMG00000182029.1 15681 5166 141 ENSG00000196361.8 ELAVL3 chr19 11451326 11481046 - protein_coding KNOWN OTTHUMG00000182030.2 29721 4761 19 ENSG00000267477.1 CTC-398G3.6 chr19 11466240 11505698 - protein_coding NOVEL OTTHUMG00000182031.1 39459 727 5 ENSG00000161914.8 ZNF653 chr19 11483427 11505923 - protein_coding KNOWN OTTHUMG00000182032.2 22497 3301 36 ENSG00000274713.1 MIR7974 chr19 11495544 11495622 - miRNA KNOWN NA 79 79 1 ENSG00000130159.12 ECSIT chr19 11505916 11529174 - protein_coding KNOWN OTTHUMG00000178590.3 23259 2370 71 ENSG00000244080.3 RN7SL833P chr19 11516047 11516330 - misc_RNA KNOWN NA 284 284 1 ENSG00000213304.3 CTC-398G3.1 chr19 11521968 11522498 + processed_pseudogene KNOWN OTTHUMG00000157989.1 531 531 1 ENSG00000213303.3 CTC-398G3.2 chr19 11523436 11523831 + processed_pseudogene KNOWN OTTHUMG00000157992.1 396 396 1 ENSG00000264048.1 AL121992.1 chr1 15684472 15684558 + miRNA NOVEL NA 87 87 1 ENSG00000226498.2 RP11-182B22.2 chr1 236819634 236820518 + transcribed_processed_pseudogene KNOWN OTTHUMG00000040062.2 885 885 1 ENSG00000130176.6 CNN1 chr19 11538717 11550323 + protein_coding KNOWN OTTHUMG00000182033.1 11607 2887 49 ENSG00000130165.9 ELOF1 chr19 11551147 11559236 - protein_coding KNOWN OTTHUMG00000182034.1 8090 4173 35 ENSG00000198551.8 ZNF627 chr19 11559374 11619135 + protein_coding KNOWN OTTHUMG00000182035.1 59762 3827 28 ENSG00000102575.9 ACP5 chr19 11574660 11579008 - protein_coding KNOWN OTTHUMG00000182036.1 4349 2814 49 ENSG00000249840.2 GAPDHP76 chr19 11585246 11587135 + unprocessed_pseudogene KNOWN OTTHUMG00000160071.2 1890 976 4 ENSG00000197332.8 ZNF833P chr19 11639776 11686569 + lincRNA NOVEL OTTHUMG00000182037.2 46794 3383 10 ENSG00000267500.1 CTD-2006C1.6 chr19 11648364 11652877 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000156530.1 4514 1407 3 ENSG00000214223.4 HNRNPA1P10 chr19 11666069 11667030 - processed_pseudogene KNOWN OTTHUMG00000156531.1 962 962 1 ENSG00000267343.1 CTC-499B15.4 chr19 11682546 11686190 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000182038.1 3645 1494 3 ENSG00000197933.11 ZNF823 chr19 11721265 11739009 - protein_coding KNOWN OTTHUMG00000156528.3 17745 2459 12 ENSG00000237991.3 RPL35P1 chr1 236981339 236981708 + processed_pseudogene KNOWN OTTHUMG00000040064.1 370 370 1 ENSG00000266922.1 CTC-499B15.6 chr19 11725961 11730783 - sense_intronic NOVEL OTTHUMG00000182241.1 4823 491 2 ENSG00000220949.2 CTC-499B15.1 chr19 11756533 11759933 - unprocessed_pseudogene KNOWN OTTHUMG00000156532.1 3401 1383 4 ENSG00000197044.9 ZNF441 chr19 11767000 11784078 + protein_coding KNOWN OTTHUMG00000154449.4 17079 4748 11 ENSG00000267646.1 CTC-499B15.7 chr19 11796084 11798598 - antisense NOVEL OTTHUMG00000182300.1 2515 2515 1 ENSG00000177599.11 ZNF491 chr19 11797667 11809622 + protein_coding KNOWN OTTHUMG00000156529.1 11956 3032 11 ENSG00000171295.11 ZNF440 chr19 11814284 11835201 + protein_coding KNOWN OTTHUMG00000156403.3 20918 6427 20 ENSG00000267089.1 CTC-499B15.8 chr19 11841241 11842439 - lincRNA NOVEL OTTHUMG00000182301.1 1199 442 2 ENSG00000171291.7 ZNF439 chr19 11848726 11883750 + protein_coding KNOWN OTTHUMG00000156527.2 35025 5207 13 ENSG00000278897.1 AC020951.1 chr19 11856032 11858302 + TEC KNOWN OTTHUMG00000182302.1 2271 2271 1 ENSG00000198429.8 ZNF69 chr19 11887784 11914329 + protein_coding KNOWN OTTHUMG00000156526.1 26546 2931 13 ENSG00000244020.2 MT1HL1 chr1 237004103 237004418 - protein_coding KNOWN OTTHUMG00000040065.4 316 316 1 ENSG00000196757.6 ZNF700 chr19 11925068 11950773 + protein_coding KNOWN OTTHUMG00000156421.3 25706 3319 11 ENSG00000267179.1 CTD-2006C1.13 chr19 11925075 11979290 + protein_coding NOVEL OTTHUMG00000182304.1 54216 2219 17 ENSG00000267274.1 CTD-2006C1.12 chr19 11939959 11953381 + sense_overlapping NOVEL OTTHUMG00000182305.1 13423 468 2 ENSG00000197054.10 ZNF763 chr19 11965037 11980381 + protein_coding KNOWN OTTHUMG00000156430.4 15345 2845 16 ENSG00000219665.7 CTD-2006C1.2 chr19 11987617 12046275 + processed_transcript NOVEL OTTHUMG00000156428.2 58659 5890 26 ENSG00000252060.1 RNA5SP464 chr19 11996809 11996916 + rRNA KNOWN NA 108 108 1 ENSG00000197647.10 ZNF433 chr19 12014732 12035741 - protein_coding KNOWN OTTHUMG00000156427.3 21010 3079 44 ENSG00000257355.1 CTD-2006C1.10 chr19 12017888 12052967 - protein_coding NOVEL OTTHUMG00000169369.1 35080 542 5 ENSG00000212497.1 RNA5SP465 chr19 12027913 12028021 - rRNA KNOWN NA 109 109 1 ENSG00000257446.3 ZNF878 chr19 12043805 12052939 - protein_coding KNOWN OTTHUMG00000169370.1 9135 1734 4 ENSG00000198626.14 RYR2 chr1 237042205 237833988 + protein_coding KNOWN OTTHUMG00000039543.3 791784 17777 258 ENSG00000223547.8 ZNF844 chr19 12064699 12081565 + protein_coding KNOWN OTTHUMG00000156405.2 16867 6620 9 ENSG00000252546.1 RNA5SP466 chr19 12070164 12070271 + rRNA KNOWN NA 108 108 1 ENSG00000199444.1 Y_RNA chr19 12088245 12088346 - misc_RNA NOVEL NA 102 102 1 ENSG00000214189.7 ZNF788 chr19 12092263 12137235 + protein_coding KNOWN OTTHUMG00000156416.3 44973 7434 22 ENSG00000132010.14 ZNF20 chr19 12092843 12140407 - protein_coding KNOWN OTTHUMG00000156409.2 47565 4148 30 ENSG00000237273.1 RSL24D1P8 chr19 12096424 12096915 + processed_pseudogene KNOWN OTTHUMG00000156414.1 492 492 1 ENSG00000212576.1 RNA5SP467 chr19 12106497 12106614 + rRNA KNOWN NA 118 118 1 ENSG00000213297.7 ZNF625-ZNF20 chr19 12132117 12156731 - protein_coding NOVEL OTTHUMG00000170135.1 24615 3639 14 ENSG00000242615.1 CTC-359D24.3 chr19 12141806 12143322 - transcribed_processed_pseudogene KNOWN OTTHUMG00000158017.1 1517 1517 2 ENSG00000257591.4 ZNF625 chr19 12142090 12156729 - protein_coding KNOWN OTTHUMG00000156407.2 14640 2204 12 ENSG00000252396.1 RN7SKP195 chr1 237120807 237121109 + misc_RNA KNOWN NA 303 303 1 ENSG00000196646.10 ZNF136 chr19 12163064 12189881 + protein_coding KNOWN OTTHUMG00000156429.4 26818 5425 22 ENSG00000234773.5 CTD-2666L21.1 chr19 12195015 12237767 + lincRNA NOVEL OTTHUMG00000156425.1 42753 1517 10 ENSG00000197857.12 ZNF44 chr19 12224686 12294887 - protein_coding KNOWN OTTHUMG00000156424.2 70202 6061 48 ENSG00000213293.4 CTD-2666L21.3 chr19 12260126 12260537 + processed_pseudogene KNOWN OTTHUMG00000158019.1 412 412 1 ENSG00000234750.1 CTD-2666L21.2 chr19 12284337 12285185 + processed_pseudogene KNOWN OTTHUMG00000156399.1 849 849 1 ENSG00000188868.12 ZNF563 chr19 12317477 12333720 - protein_coding KNOWN OTTHUMG00000156413.2 16244 2847 19 ENSG00000198342.8 ZNF442 chr19 12345949 12365905 - protein_coding KNOWN OTTHUMG00000156411.2 19957 6569 19 ENSG00000231361.1 CTD-3105H18.5 chr19 12373609 12373731 + processed_pseudogene KNOWN OTTHUMG00000156401.1 123 123 1 ENSG00000268744.1 CTD-3105H18.14 chr19 12379189 12401274 - protein_coding KNOWN OTTHUMG00000156422.1 22086 2593 4 ENSG00000248406.1 CTD-3105H18.4 chr19 12379746 12383687 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000182409.1 3942 1829 3 ENSG00000266262.1 MIR4428 chr1 237471119 237471191 + miRNA KNOWN NA 73 73 1 ENSG00000196466.9 ZNF799 chr19 12390016 12401271 - protein_coding KNOWN OTTHUMG00000156408.3 11256 5055 16 ENSG00000268870.1 CTD-3105H18.16 chr19 12391949 12441082 - protein_coding PUTATIVE OTTHUMG00000182410.1 49134 617 4 ENSG00000180855.14 ZNF443 chr19 12429707 12441112 - protein_coding KNOWN OTTHUMG00000156404.1 11406 2753 8 ENSG00000269755.1 CTD-3105H18.18 chr19 12433103 12484816 - protein_coding NOVEL OTTHUMG00000182413.1 51714 588 5 ENSG00000234848.1 CTD-3105H18.7 chr19 12450935 12460705 + antisense NOVEL OTTHUMG00000156423.1 9771 695 3 ENSG00000242852.5 ZNF709 chr19 12461184 12513854 - protein_coding KNOWN OTTHUMG00000156406.1 52671 5708 10 ENSG00000196826.7 ZNF709 chr19 12461559 12551474 - protein_coding PUTATIVE OTTHUMG00000162246.1 89916 4505 4 ENSG00000236483.1 CTD-3105H18.8 chr19 12502675 12504106 + unprocessed_pseudogene KNOWN OTTHUMG00000156417.1 1432 841 3 ENSG00000232579.1 CTD-3105H18.10 chr19 12504665 12504890 + unprocessed_pseudogene KNOWN OTTHUMG00000156412.1 226 226 1 ENSG00000230321.1 CTD-3105H18.9 chr19 12504905 12505976 + unprocessed_pseudogene KNOWN OTTHUMG00000156415.1 1072 428 2 ENSG00000252290.1 SNORA25 chr1 237555040 237555171 - snoRNA NOVEL NA 132 132 1 ENSG00000234003.1 CTD-3105H18.11 chr19 12506249 12508030 + unprocessed_pseudogene KNOWN OTTHUMG00000156410.1 1782 621 4 ENSG00000235686.1 PPIAP20 chr19 12508129 12508263 + processed_pseudogene KNOWN OTTHUMG00000156419.1 135 135 1 ENSG00000249709.6 ZNF564 chr19 12525370 12551542 - protein_coding KNOWN OTTHUMG00000156418.3 26173 3622 18 ENSG00000269693.1 CTD-2192J16.20 chr19 12525720 12580975 - protein_coding NOVEL OTTHUMG00000182414.1 55256 5857 4 ENSG00000269560.1 CTD-2192J16.21 chr19 12529768 12532973 - sense_intronic NOVEL OTTHUMG00000182614.1 3206 533 2 ENSG00000230310.1 CTD-2192J16.11 chr19 12552597 12553644 + lincRNA NOVEL OTTHUMG00000156402.1 1048 543 2 ENSG00000213290.4 PGK1P2 chr19 12559571 12561105 + processed_pseudogene KNOWN OTTHUMG00000156420.3 1535 1214 2 ENSG00000188033.8 ZNF490 chr19 12577961 12640098 - protein_coding KNOWN OTTHUMG00000156398.1 62138 4921 21 ENSG00000173875.12 ZNF791 chr19 12610918 12633840 + protein_coding KNOWN OTTHUMG00000156426.3 22923 6642 22 ENSG00000178464.6 CTD-2192J16.15 chr19 12643275 12643919 - processed_pseudogene KNOWN OTTHUMG00000156400.1 645 645 1 ENSG00000237250.3 RP11-193H5.1 chr1 237862175 237928321 + antisense NOVEL OTTHUMG00000039587.1 66147 3127 12 ENSG00000269242.1 CTD-2192J16.22 chr19 12643831 12648397 - protein_coding NOVEL OTTHUMG00000182615.1 4567 838 5 ENSG00000104774.11 MAN2B1 chr19 12646511 12666742 - protein_coding KNOWN OTTHUMG00000156397.3 20232 5374 122 ENSG00000269590.1 CTD-2192J16.24 chr19 12664828 12669397 - protein_coding PUTATIVE OTTHUMG00000182616.1 4570 585 5 ENSG00000123154.10 WDR83 chr19 12666800 12675832 + protein_coding KNOWN OTTHUMG00000169356.1 9033 2360 82 ENSG00000105583.8 WDR83OS chr19 12668071 12671356 - protein_coding KNOWN OTTHUMG00000182617.1 3286 2656 13 ENSG00000095059.14 DHPS chr19 12675717 12681902 - protein_coding KNOWN OTTHUMG00000182618.1 6186 3006 127 ENSG00000268945.1 CTD-2192J16.26 chr19 12682693 12687279 - lincRNA NOVEL OTTHUMG00000182619.1 4587 635 2 ENSG00000132004.11 FBXW9 chr19 12688053 12696643 - protein_coding KNOWN OTTHUMG00000150152.2 8591 2114 29 ENSG00000267791.1 CTD-2659N19.2 chr19 12688922 12689238 + antisense NOVEL OTTHUMG00000180332.1 317 272 2 ENSG00000105576.14 TNPO2 chr19 12699194 12724011 - protein_coding KNOWN OTTHUMG00000180333.2 24818 7029 208 ENSG00000116996.8 ZP4 chr1 237877864 237890922 - protein_coding KNOWN OTTHUMG00000039586.1 13059 2474 25 ENSG00000209702.1 SNORD41 chr19 12706449 12706518 - snoRNA KNOWN NA 70 70 1 ENSG00000267004.1 CTD-2659N19.4 chr19 12725517 12725886 - lincRNA NOVEL OTTHUMG00000180337.1 370 97 2 ENSG00000123144.9 C19orf43 chr19 12730640 12734775 - protein_coding KNOWN OTTHUMG00000180347.1 4136 1402 13 ENSG00000198356.10 ASNA1 chr19 12737139 12748323 + protein_coding KNOWN OTTHUMG00000180355.1 11185 1652 30 ENSG00000039987.5 BEST2 chr19 12751702 12758458 + protein_coding KNOWN OTTHUMG00000169293.3 6757 2646 31 ENSG00000095066.10 HOOK2 chr19 12763003 12872740 - protein_coding KNOWN OTTHUMG00000180372.2 109738 5950 153 ENSG00000281408.1 AC018761.1 chr19 12768058 12768189 + miRNA NOVEL NA 132 132 1 ENSG00000280783.1 Metazoa_SRP chr19 12781157 12781444 + misc_RNA NOVEL NA 288 288 1 ENSG00000267212.1 CTD-2659N19.9 chr19 12784539 12785101 - lincRNA NOVEL OTTHUMG00000180479.1 563 388 2 ENSG00000263800.1 MIR5684 chr19 12787128 12787192 + miRNA KNOWN NA 65 65 1 ENSG00000243781.1 RP11-193H5.2 chr1 237926831 237927605 + transcribed_processed_pseudogene KNOWN OTTHUMG00000039588.1 775 775 1 ENSG00000171223.5 JUNB chr19 12791496 12793315 + protein_coding KNOWN OTTHUMG00000180373.1 1820 1820 1 ENSG00000167815.10 PRDX2 chr19 12796820 12801859 - protein_coding KNOWN OTTHUMG00000134285.3 5040 2093 23 ENSG00000267062.1 CTD-2659N19.10 chr19 12796823 12801849 + antisense NOVEL OTTHUMG00000180480.1 5027 296 2 ENSG00000104889.4 RNASEH2A chr19 12806580 12813638 + protein_coding KNOWN OTTHUMG00000180481.1 7059 2039 20 ENSG00000132026.12 RTBDN chr19 12825478 12835428 - protein_coding KNOWN OTTHUMG00000180482.3 9951 2675 73 ENSG00000267424.1 CTD-2265O21.3 chr19 12825711 12832983 + antisense NOVEL OTTHUMG00000180485.1 7273 739 3 ENSG00000105613.8 MAST1 chr19 12833951 12874951 + protein_coding KNOWN OTTHUMG00000180514.2 41001 6533 75 ENSG00000276181.1 MIR6794 chr19 12852260 12852327 + miRNA KNOWN NA 68 68 1 ENSG00000265759.1 AC020934.1 chr19 12872661 12872730 - miRNA NOVEL NA 70 70 1 ENSG00000105612.7 DNASE2 chr19 12875211 12881468 - protein_coding KNOWN OTTHUMG00000180535.1 6258 2389 15 ENSG00000237938.4 RP11-288I21.1 chr1 15720312 15736896 - antisense NOVEL OTTHUMG00000003064.3 16585 1533 12 ENSG00000270188.1 MTRNR2L11 chr1 237943724 237945275 - protein_coding KNOWN OTTHUMG00000184992.1 1552 1552 1 ENSG00000267735.1 CTD-2265O21.7 chr19 12880969 12884088 + antisense NOVEL OTTHUMG00000180560.1 3120 456 2 ENSG00000105610.4 KLF1 chr19 12884423 12887181 - protein_coding KNOWN OTTHUMG00000180536.1 2759 1592 3 ENSG00000105607.11 GCDH chr19 12891026 12914207 + protein_coding KNOWN OTTHUMG00000180561.3 23182 4136 111 ENSG00000240616.1 AD000092.3 chr19 12894133 12894880 + processed_pseudogene KNOWN OTTHUMG00000158022.1 748 748 1 ENSG00000161860.7 SYCE2 chr19 12898786 12919276 - protein_coding KNOWN OTTHUMG00000180562.1 20491 1458 11 ENSG00000266721.1 MIR5695 chr19 12920320 12920404 + miRNA KNOWN NA 85 85 1 ENSG00000179115.9 FARSA chr19 12922479 12934037 - protein_coding KNOWN OTTHUMG00000180569.2 11559 2435 94 ENSG00000266975.1 FARSA-AS1 chr19 12930522 12933296 + antisense NOVEL OTTHUMG00000180573.1 2775 241 3 ENSG00000179218.12 CALR chr19 12938578 12944489 + protein_coding KNOWN OTTHUMG00000180574.1 5912 2714 32 ENSG00000274417.1 MIR6515 chr19 12940484 12940540 + miRNA KNOWN NA 57 57 1 ENSG00000232154.2 RP11-193H5.5 chr1 237948017 237949143 - processed_pseudogene KNOWN OTTHUMG00000039591.2 1127 1127 1 ENSG00000267458.1 CTC-425F1.4 chr19 12944118 12944487 - antisense NOVEL OTTHUMG00000180575.1 370 270 2 ENSG00000179262.8 RAD23A chr19 12945855 12953642 + protein_coding KNOWN OTTHUMG00000180723.2 7788 2449 67 ENSG00000179271.2 GADD45GIP1 chr19 12953119 12957236 - protein_coding KNOWN OTTHUMG00000180724.3 4118 1782 2 ENSG00000280662.1 AC092069.1 chr19 12958855 12958947 + miRNA NOVEL NA 93 93 1 ENSG00000179284.5 DAND5 chr19 12965159 12974762 + protein_coding KNOWN OTTHUMG00000180725.2 9604 1997 6 ENSG00000008441.15 NFIX chr19 12995608 13098796 + protein_coding KNOWN OTTHUMG00000180726.2 103189 6302 110 ENSG00000267417.1 CTC-239J10.1 chr19 13013662 13014511 - antisense NOVEL OTTHUMG00000180727.1 850 523 2 ENSG00000267610.2 AC007787.2 chr19 13069792 13071374 - antisense NOVEL OTTHUMG00000180728.2 1583 1583 1 ENSG00000279044.1 AC007787.3 chr19 13081966 13082564 + TEC KNOWN OTTHUMG00000180729.1 599 599 1 ENSG00000104903.4 LYL1 chr19 13099033 13103161 - protein_coding KNOWN OTTHUMG00000180736.1 4129 3119 8 ENSG00000225723.1 MTND6P15 chr1 237949214 237949734 + processed_pseudogene KNOWN OTTHUMG00000039590.1 521 521 1 ENSG00000104907.11 TRMT1 chr19 13104902 13117567 - protein_coding KNOWN OTTHUMG00000180730.2 12666 3364 163 ENSG00000160877.5 NACC1 chr19 13118103 13141141 + protein_coding KNOWN OTTHUMG00000180748.1 23039 4474 10 ENSG00000266897.1 AC005546.2 chr19 13131571 13132410 + lincRNA NOVEL OTTHUMG00000180749.1 840 391 2 ENSG00000267512.1 CTC-250I14.3 chr19 13139617 13141147 - antisense NOVEL OTTHUMG00000180750.1 1531 458 2 ENSG00000104915.13 STX10 chr19 13144058 13150383 - protein_coding KNOWN OTTHUMG00000180759.1 6326 1796 69 ENSG00000160888.6 IER2 chr19 13150415 13154908 + protein_coding KNOWN OTTHUMG00000180790.1 4494 3072 5 ENSG00000267598.1 CTC-250I14.6 chr19 13153071 13154193 - antisense NOVEL OTTHUMG00000180791.1 1123 946 4 ENSG00000213253.5 CTC-250I14.1 chr19 13157959 13158788 - processed_pseudogene KNOWN OTTHUMG00000158033.1 830 499 2 ENSG00000141837.17 CACNA1A chr19 13206442 13623990 - protein_coding KNOWN OTTHUMG00000044590.4 417549 10920 220 ENSG00000252177.1 AC005513.1 chr19 13375929 13376013 - miRNA NOVEL NA 85 85 1 ENSG00000227860.1 MTND5P18 chr1 237949736 237951536 - processed_pseudogene KNOWN OTTHUMG00000039589.1 1801 1801 1 ENSG00000104957.12 CCDC130 chr19 13731760 13763296 + protein_coding KNOWN OTTHUMG00000180837.5 31537 3307 72 ENSG00000037757.12 MRI1 chr19 13764532 13774282 + protein_coding KNOWN OTTHUMG00000180867.3 9751 3456 27 ENSG00000267633.1 CTB-5E10.3 chr19 13772118 13774118 - antisense NOVEL OTTHUMG00000180913.1 2001 1081 6 ENSG00000104979.7 C19orf53 chr19 13774168 13778462 + protein_coding KNOWN OTTHUMG00000180914.1 4295 1174 17 ENSG00000280221.1 AC008686.1 chr19 13780070 13790158 - protein_coding KNOWN NA 10089 384 7 ENSG00000132003.8 ZSWIM4 chr19 13795460 13832230 + protein_coding KNOWN OTTHUMG00000181752.1 36771 4713 30 ENSG00000267582.1 CTD-3252C9.2 chr19 13796574 13796933 - antisense NOVEL OTTHUMG00000181753.1 360 360 1 ENSG00000266770.2 RN7SL619P chr19 13815062 13815319 - misc_RNA KNOWN NA 258 258 1 ENSG00000267519.3 CTD-3252C9.4 chr19 13834516 13836289 - lincRNA NOVEL OTTHUMG00000181848.1 1774 1774 1 ENSG00000276797.1 MIR24-2 chr19 13836287 13836359 - miRNA KNOWN NA 73 73 1 ENSG00000230019.1 YWHAQP9 chr1 238107736 238108567 - processed_pseudogene KNOWN OTTHUMG00000039601.1 832 512 2 ENSG00000207808.1 MIR27A chr19 13836440 13836517 - miRNA KNOWN NA 78 78 1 ENSG00000207980.1 MIR23A chr19 13836587 13836659 - miRNA KNOWN NA 73 73 1 ENSG00000187556.7 NANOS3 chr19 13862063 13880757 + protein_coding KNOWN OTTHUMG00000181850.1 18695 988 10 ENSG00000207613.1 MIR181C chr19 13874699 13874808 + miRNA KNOWN NA 110 110 1 ENSG00000207585.1 MIR181D chr19 13874875 13875011 + miRNA KNOWN NA 137 137 1 ENSG00000132016.10 C19orf57 chr19 13882348 13906452 - protein_coding KNOWN OTTHUMG00000181851.1 24105 3840 38 ENSG00000132024.16 CC2D1A chr19 13906201 13930879 + protein_coding KNOWN OTTHUMG00000181852.1 24679 5039 140 ENSG00000132000.10 PODNL1 chr19 13931187 13953392 - protein_coding KNOWN OTTHUMG00000181853.2 22206 4168 58 ENSG00000132017.9 DCAF15 chr19 13952492 13961449 + protein_coding KNOWN OTTHUMG00000181882.2 8958 2961 32 ENSG00000132005.7 RFX1 chr19 13961538 14007039 - protein_coding KNOWN OTTHUMG00000181979.2 45502 5465 47 ENSG00000232989.1 RP11-136B18.1 chr1 238268494 238268595 - processed_pseudogene KNOWN OTTHUMG00000039534.2 102 102 1 ENSG00000275091.1 CTB-55O6.13 chr19 14006422 14006773 + antisense NOVEL OTTHUMG00000186616.1 352 352 1 ENSG00000171136.6 RLN3 chr19 14028148 14031042 + protein_coding KNOWN OTTHUMG00000181986.1 2895 692 5 ENSG00000267670.1 CTB-55O6.4 chr19 14030855 14031557 - antisense NOVEL OTTHUMG00000181987.1 703 518 2 ENSG00000104998.3 IL27RA chr19 14031748 14053216 + protein_coding KNOWN OTTHUMG00000181990.2 21469 2962 14 ENSG00000187867.7 PALM3 chr19 14053365 14059159 - protein_coding KNOWN OTTHUMG00000181991.1 5795 2533 15 ENSG00000228887.3 EEF1DP1 chr19 14070342 14071237 + processed_pseudogene KNOWN OTTHUMG00000181993.1 896 896 1 ENSG00000141854.6 CTB-55O6.8 chr19 14072536 14075062 + protein_coding NOVEL OTTHUMG00000181994.2 2527 2354 11 ENSG00000277805.1 MIR1199 chr19 14073361 14073479 + miRNA KNOWN NA 119 119 1 ENSG00000188032.8 C19orf67 chr19 14081619 14085875 - protein_coding KNOWN OTTHUMG00000169303.1 4257 1540 14 ENSG00000141858.10 SAMD1 chr19 14087840 14091036 - protein_coding KNOWN OTTHUMG00000166628.3 3197 2263 12 ENSG00000234464.1 RP11-136B18.2 chr1 238276037 238287016 + lincRNA NOVEL OTTHUMG00000041437.1 10980 197 2 ENSG00000072062.12 PRKACA chr19 14091688 14118084 - protein_coding KNOWN OTTHUMG00000182051.2 26397 6144 64 ENSG00000267783.1 CTB-55O6.10 chr19 14119106 14119537 + antisense NOVEL OTTHUMG00000182137.1 432 315 2 ENSG00000105011.7 ASF1B chr19 14119509 14136956 - protein_coding KNOWN OTTHUMG00000150401.2 17448 2304 17 ENSG00000267169.1 CTB-55O6.12 chr19 14137179 14171267 + antisense NOVEL OTTHUMG00000182142.1 34089 3186 7 ENSG00000072071.15 LPHN1 chr19 14147743 14206187 - protein_coding KNOWN OTTHUMG00000182138.3 58445 8487 70 ENSG00000281044.1 AC022098.2 chr19 14163039 14163183 + miRNA NOVEL NA 145 145 1 ENSG00000280483.1 AC022098.1 chr19 14163314 14163429 + miRNA NOVEL NA 116 116 1 ENSG00000240803.3 RN7SL231P chr19 14213052 14213323 + misc_RNA KNOWN NA 272 272 1 ENSG00000280955.1 AC011509.1 chr19 14213241 14213321 + miRNA NOVEL NA 81 81 1 ENSG00000267723.1 CTD-2189E23.1 chr19 14254189 14293205 - lincRNA NOVEL OTTHUMG00000182162.1 39017 627 5 ENSG00000252371.1 RNU6-725P chr1 238325687 238325788 - snRNA KNOWN NA 102 102 1 ENSG00000267406.1 CTD-2189E23.2 chr19 14267807 14269377 - lincRNA NOVEL OTTHUMG00000182163.1 1571 164 2 ENSG00000266913.1 CTC-548K16.2 chr19 14305458 14370196 - lincRNA NOVEL OTTHUMG00000182164.1 64739 1016 8 ENSG00000267147.2 CTC-548K16.1 chr19 14333743 14343916 + lincRNA NOVEL OTTHUMG00000182165.2 10174 768 2 ENSG00000123146.18 CD97 chr19 14380501 14408725 + protein_coding KNOWN OTTHUMG00000182166.3 28225 5382 106 ENSG00000267379.1 CTC-548K16.5 chr19 14402717 14408723 - antisense NOVEL OTTHUMG00000182182.1 6007 252 2 ENSG00000123136.13 DDX39A chr19 14408819 14419383 - protein_coding KNOWN OTTHUMG00000182181.3 10565 3840 115 ENSG00000123143.11 PKN1 chr19 14433053 14471867 + protein_coding KNOWN OTTHUMG00000039611.2 38815 4606 115 ENSG00000267474.1 CTC-548K16.6 chr19 14458401 14459366 + sense_intronic NOVEL OTTHUMG00000182209.1 966 889 2 ENSG00000160951.3 PTGER1 chr19 14472466 14475362 - protein_coding KNOWN OTTHUMG00000039610.1 2897 1421 3 ENSG00000123159.14 GIPC1 chr19 14477760 14496149 - protein_coding KNOWN OTTHUMG00000182248.3 18390 4440 63 ENSG00000215808.2 LINC01139 chr1 238480384 238486023 - lincRNA NOVEL OTTHUMG00000039532.1 5640 1537 2 ENSG00000224543.4 SNRPGP15 chr19 14489388 14489609 + processed_pseudogene KNOWN OTTHUMG00000183288.1 222 222 1 ENSG00000132002.6 DNAJB1 chr19 14514770 14529770 - protein_coding KNOWN OTTHUMG00000183289.1 15001 3672 33 ENSG00000099797.10 TECR chr19 14517085 14565980 + protein_coding KNOWN OTTHUMG00000183290.1 48896 5749 184 ENSG00000207707.1 MIR639 chr19 14529543 14529640 + miRNA KNOWN NA 98 98 1 ENSG00000099795.5 NDUFB7 chr19 14566078 14572062 - protein_coding KNOWN OTTHUMG00000183291.1 5985 531 6 ENSG00000187912.10 CLEC17A chr19 14583084 14611157 + protein_coding KNOWN OTTHUMG00000169312.1 28074 2238 54 ENSG00000243488.3 RN7SL337P chr19 14584095 14584395 + misc_RNA KNOWN NA 301 301 1 ENSG00000243066.3 RN7SL842P chr19 14588357 14588656 + misc_RNA KNOWN NA 300 300 1 ENSG00000131355.13 EMR3 chr19 14619117 14690027 - protein_coding KNOWN OTTHUMG00000183406.1 70911 2837 61 ENSG00000269378.1 ITGB1P1 chr19 14621634 14622242 - processed_pseudogene KNOWN OTTHUMG00000183370.1 609 609 1 ENSG00000231877.1 RP11-177F15.1 chr1 238485445 238538305 + lincRNA NOVEL OTTHUMG00000039533.1 52861 2900 4 ENSG00000275432.1 CTD-3093B17.2 chr19 14628599 14628801 + processed_pseudogene KNOWN OTTHUMG00000187968.1 203 203 1 ENSG00000160961.10 ZNF333 chr19 14689801 14733746 + protein_coding KNOWN OTTHUMG00000183407.1 43946 11611 82 ENSG00000127507.16 EMR2 chr19 14732393 14778541 - protein_coding KNOWN OTTHUMG00000183408.2 46149 8622 189 ENSG00000256210.3 AC005255.3 chr19 14792318 14792533 + processed_pseudogene KNOWN OTTHUMG00000183409.1 216 216 1 ENSG00000188269.7 OR7A5 chr19 14792490 14835376 - protein_coding KNOWN OTTHUMG00000183410.1 42887 1924 13 ENSG00000127530.2 OR7C1 chr19 14799146 14800211 - protein_coding KNOWN OTTHUMG00000183411.1 1066 1066 1 ENSG00000127515.1 OR7A10 chr19 14840948 14841877 - protein_coding KNOWN OTTHUMG00000183412.1 930 930 1 ENSG00000269552.1 AC005255.5 chr19 14852032 14852944 - unprocessed_pseudogene KNOWN OTTHUMG00000183413.1 913 913 1 ENSG00000172148.2 AC005255.6 chr19 14863786 14864715 - unprocessed_pseudogene KNOWN OTTHUMG00000183414.1 930 930 1 ENSG00000185385.3 OR7A17 chr19 14880426 14881452 - protein_coding KNOWN OTTHUMG00000183415.1 1027 1027 1 ENSG00000162461.7 SLC25A34 chr1 15736405 15741396 + protein_coding KNOWN OTTHUMG00000003063.1 4992 3195 11 ENSG00000215149.3 KRT18P32 chr1 238491358 238492644 + processed_pseudogene KNOWN OTTHUMG00000039531.1 1287 1287 1 ENSG00000269678.1 OR7A18P chr19 14886839 14887115 - unprocessed_pseudogene KNOWN OTTHUMG00000183346.1 277 277 1 ENSG00000268834.1 OR7A1P chr19 14891895 14892804 - unprocessed_pseudogene KNOWN OTTHUMG00000183347.1 910 910 1 ENSG00000269787.2 OR7A3P chr19 14903232 14904138 - unprocessed_pseudogene KNOWN OTTHUMG00000183348.1 907 907 1 ENSG00000198367.3 OR7A11P chr19 14916428 14917380 + unprocessed_pseudogene KNOWN OTTHUMG00000154276.2 953 953 1 ENSG00000176923.4 OR7A15P chr19 14927058 14928024 + unprocessed_pseudogene KNOWN OTTHUMG00000183349.1 967 907 2 ENSG00000127529.7 OR7C2 chr19 14941489 14942448 + protein_coding KNOWN OTTHUMG00000183350.1 960 960 1 ENSG00000105143.11 SLC1A6 chr19 14950034 15022990 - protein_coding KNOWN OTTHUMG00000183351.1 72957 7646 62 ENSG00000160994.3 CCDC105 chr19 15010744 15023269 + protein_coding KNOWN OTTHUMG00000183352.1 12526 1732 7 ENSG00000105141.5 CASP14 chr19 15049384 15058293 + protein_coding KNOWN OTTHUMG00000183205.1 8910 3497 10 ENSG00000223201.1 AC004699.1 chr19 15052930 15053074 + miRNA NOVEL NA 145 145 1 ENSG00000224783.1 MIPEPP2 chr1 238777049 238779200 - processed_pseudogene KNOWN OTTHUMG00000039535.1 2152 1819 2 ENSG00000094661.2 OR1I1 chr19 15086980 15088221 + protein_coding KNOWN OTTHUMG00000183206.1 1242 1242 1 ENSG00000105137.11 SYDE1 chr19 15107403 15114988 + protein_coding KNOWN OTTHUMG00000183207.2 7586 3965 27 ENSG00000105135.14 ILVBL chr19 15114984 15125785 - protein_coding KNOWN OTTHUMG00000165630.2 10802 5615 103 ENSG00000268564.1 AC003956.1 chr19 15124160 15126174 + antisense NOVEL OTTHUMG00000183208.1 2015 356 3 ENSG00000267961.1 OR10B1P chr19 15141132 15142038 - unprocessed_pseudogene KNOWN OTTHUMG00000183216.1 907 907 1 ENSG00000252661.1 RNU6-782P chr19 15145215 15145318 + snRNA KNOWN NA 104 104 1 ENSG00000074181.7 NOTCH3 chr19 15159038 15200981 - protein_coding KNOWN OTTHUMG00000183217.2 41944 9394 69 ENSG00000275711.1 MIR6795 chr19 15179283 15179350 - miRNA KNOWN NA 68 68 1 ENSG00000269635.1 AC004257.1 chr19 15221015 15222297 - lincRNA NOVEL OTTHUMG00000183250.1 1283 277 2 ENSG00000105131.6 EPHX3 chr19 15226919 15233435 - protein_coding KNOWN OTTHUMG00000183251.1 6517 2034 28 ENSG00000227854.1 RP11-307O1.1 chr1 239052748 239052903 - processed_pseudogene KNOWN OTTHUMG00000039565.1 156 156 1 ENSG00000141867.16 BRD4 chr19 15235519 15332545 - protein_coding KNOWN OTTHUMG00000183252.7 97027 12093 81 ENSG00000270802.2 AC005776.1 chr19 15338948 15339237 + processed_pseudogene KNOWN OTTHUMG00000184910.2 290 290 1 ENSG00000273218.1 LLNLR-246C6.1 chr19 15346068 15348417 - lincRNA NOVEL OTTHUMG00000186035.1 2350 1769 2 ENSG00000105127.7 AKAP8 chr19 15353385 15379798 - protein_coding KNOWN OTTHUMG00000182444.4 26414 4296 44 ENSG00000268189.2 AC005785.2 chr19 15379076 15381194 + processed_transcript NOVEL OTTHUMG00000182445.2 2119 1911 3 ENSG00000011243.16 AKAP8L chr19 15380048 15419141 - protein_coding KNOWN OTTHUMG00000182446.7 39094 5081 146 ENSG00000279203.1 AC005785.5 chr19 15383202 15383832 - TEC KNOWN OTTHUMG00000182447.4 631 631 1 ENSG00000279716.1 AC006128.2 chr19 15398696 15400356 + TEC KNOWN OTTHUMG00000182477.2 1661 1661 1 ENSG00000011451.16 WIZ chr19 15419980 15449951 - protein_coding KNOWN OTTHUMG00000182448.7 29972 7965 47 ENSG00000269782.1 MIR1470 chr19 15449548 15449608 + miRNA KNOWN NA 61 61 1 ENSG00000259776.1 RP11-544D21.2 chr1 239247808 239250818 - lincRNA NOVEL OTTHUMG00000176474.1 3011 3011 1 ENSG00000105122.11 RASAL3 chr19 15451624 15464571 - protein_coding KNOWN OTTHUMG00000182450.4 12948 4681 52 ENSG00000161031.11 PGLYRP2 chr19 15468645 15498956 - protein_coding KNOWN OTTHUMG00000150690.4 30312 3188 16 ENSG00000171954.11 CYP4F22 chr19 15508493 15552317 + protein_coding KNOWN OTTHUMG00000182451.2 43825 2644 26 ENSG00000269765.2 CTB-187L3.1 chr19 15515342 15516836 - unprocessed_pseudogene KNOWN OTTHUMG00000182452.2 1495 315 3 ENSG00000269516.5 CYP4F23P chr19 15564074 15584709 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000182453.4 20636 1579 14 ENSG00000267135.2 AD000091.3 chr19 15611623 15611909 - processed_pseudogene KNOWN OTTHUMG00000182384.5 287 287 1 ENSG00000225067.4 RPL23AP2 chr19 15611657 15612122 + processed_pseudogene KNOWN OTTHUMG00000158039.3 466 466 1 ENSG00000266951.2 AD000091.2 chr19 15613247 15614553 - lincRNA NOVEL OTTHUMG00000182385.2 1307 602 2 ENSG00000186526.11 CYP4F8 chr19 15615218 15630638 + protein_coding KNOWN OTTHUMG00000182386.5 15421 7048 74 ENSG00000186529.13 CYP4F3 chr19 15615617 15662825 + protein_coding KNOWN OTTHUMG00000182374.5 47209 5860 88 ENSG00000133019.10 CHRM3 chr1 239386565 239915452 + protein_coding KNOWN OTTHUMG00000039649.4 528888 12170 31 ENSG00000267241.2 CYP4F10P chr19 15664106 15669826 + unprocessed_pseudogene KNOWN OTTHUMG00000182388.2 5721 752 6 ENSG00000186204.13 CYP4F12 chr19 15672757 15697174 + protein_coding KNOWN OTTHUMG00000164477.12 24418 5351 112 ENSG00000171942.4 OR10H2 chr19 15728020 15729060 + protein_coding KNOWN OTTHUMG00000182389.1 1041 1041 1 ENSG00000171936.1 OR10H3 chr19 15741393 15742343 + protein_coding KNOWN OTTHUMG00000182390.1 951 951 1 ENSG00000267594.5 CYP4F24P chr19 15760241 15779909 - unprocessed_pseudogene KNOWN OTTHUMG00000182391.4 19669 1580 11 ENSG00000268673.3 LLNLR-249E10.1 chr19 15760375 15770828 + lincRNA NOVEL OTTHUMG00000186011.1 10454 561 2 ENSG00000172519.8 OR10H5 chr19 15793951 15795082 + protein_coding KNOWN OTTHUMG00000182284.1 1132 1132 1 ENSG00000186723.3 OR10H1 chr19 15807003 15808126 - protein_coding KNOWN OTTHUMG00000182285.1 1124 1124 1 ENSG00000267235.2 ZNF861P chr19 15821796 15823797 - unprocessed_pseudogene KNOWN OTTHUMG00000182286.3 2002 639 2 ENSG00000267308.1 AC004510.3 chr19 15827045 15835853 - lincRNA NOVEL OTTHUMG00000160750.21 8809 669 4 ENSG00000233355.5 CHRM3-AS2 chr1 239703381 239730465 - antisense NOVEL OTTHUMG00000039648.7 27085 3888 32 ENSG00000214049.6 UCA1 chr19 15828961 15836320 + processed_transcript KNOWN OTTHUMG00000182287.20 7360 2299 8 ENSG00000273782.1 UCA1 chr19 15834730 15834804 + misc_RNA NOVEL NA 75 75 1 ENSG00000267453.5 AC004791.2 chr19 15851993 15864904 - lincRNA NOVEL OTTHUMG00000182288.2 12912 514 6 ENSG00000273330.1 CYP4F36P chr19 15871667 15871852 - unprocessed_pseudogene KNOWN OTTHUMG00000182289.5 186 186 1 ENSG00000186115.11 CYP4F2 chr19 15878023 15898120 - protein_coding KNOWN OTTHUMG00000185995.3 20098 3142 59 ENSG00000267218.2 AC005336.5 chr19 15902300 15903238 - processed_pseudogene KNOWN OTTHUMG00000182291.2 939 939 1 ENSG00000279717.1 LLNLF-158E9.1 chr19 15904556 15907234 + TEC KNOWN OTTHUMG00000186034.1 2679 2679 1 ENSG00000267056.2 AC005336.4 chr19 15910582 15911824 - processed_pseudogene KNOWN OTTHUMG00000182293.2 1243 1243 1 ENSG00000171903.15 CYP4F11 chr19 15912367 15934867 - protein_coding KNOWN OTTHUMG00000182294.5 22501 4027 57 ENSG00000176231.1 OR10H4 chr19 15949008 15949958 + protein_coding KNOWN OTTHUMG00000182268.1 951 951 1 ENSG00000234601.1 CHRM3-AS1 chr1 239898016 239899872 - antisense NOVEL OTTHUMG00000039650.1 1857 486 2 ENSG00000267392.3 CYP4F9P chr19 15979835 15999020 - unprocessed_pseudogene KNOWN OTTHUMG00000182269.4 19186 1339 12 ENSG00000205396.10 LINC00661 chr19 16015287 16027462 + processed_transcript KNOWN OTTHUMG00000169715.6 12176 4140 35 ENSG00000280412.1 AC114273.3 chr19 16019719 16020290 + TEC KNOWN OTTHUMG00000182270.4 572 572 1 ENSG00000167459.15 LINC00905 chr19 16031307 16042116 + processed_transcript NOVEL OTTHUMG00000186020.1 10810 2692 22 ENSG00000267609.2 SNX33P1 chr19 16034776 16036537 - processed_pseudogene KNOWN OTTHUMG00000182271.2 1762 1762 1 ENSG00000277766.1 LLNLF-136C3.1 chr19 16037009 16038455 - unprocessed_pseudogene KNOWN OTTHUMG00000187969.1 1447 536 3 ENSG00000267450.1 OR1AB1P chr19 16051929 16052689 + processed_pseudogene KNOWN OTTHUMG00000182236.1 761 761 1 ENSG00000267517.1 CTD-2231E14.4 chr19 16065737 16066312 + lincRNA NOVEL OTTHUMG00000182228.1 576 396 3 ENSG00000167460.13 TPM4 chr19 16067021 16103005 + protein_coding KNOWN OTTHUMG00000182134.3 35985 7414 73 ENSG00000279198.1 CTD-2231E14.2 chr19 16074293 16077395 - TEC KNOWN OTTHUMG00000182135.1 3103 3103 1 ENSG00000231979.1 RP11-35L17.3 chr1 239915439 239916955 - lincRNA NOVEL OTTHUMG00000039651.1 1517 443 2 ENSG00000267373.1 CTD-2231E14.5 chr19 16103761 16104254 - lincRNA NOVEL OTTHUMG00000182237.1 494 367 2 ENSG00000167461.10 RAB8A chr19 16111629 16134234 + protein_coding KNOWN OTTHUMG00000182238.1 22606 5191 33 ENSG00000269243.1 CTD-2231E14.8 chr19 16123661 16139892 - antisense NOVEL OTTHUMG00000182239.1 16232 3927 4 ENSG00000196684.11 HSH2D chr19 16134028 16158575 + protein_coding KNOWN OTTHUMG00000182256.4 24548 3398 46 ENSG00000141977.8 CIB3 chr19 16161368 16173525 - protein_coding KNOWN OTTHUMG00000182281.1 12158 711 20 ENSG00000105058.10 FAM32A chr19 16185380 16192046 + protein_coding KNOWN OTTHUMG00000182279.1 6667 1921 18 ENSG00000267033.1 CTD-2562J15.4 chr19 16186276 16189458 - antisense NOVEL OTTHUMG00000182280.1 3183 578 2 ENSG00000275901.1 Metazoa_SRP chr19 16187313 16187566 + misc_RNA NOVEL NA 254 254 1 ENSG00000072958.7 AP1M1 chr19 16197578 16245907 + protein_coding KNOWN OTTHUMG00000182323.3 48330 14371 88 ENSG00000267275.1 CTD-2562J15.6 chr19 16283359 16324514 - antisense NOVEL OTTHUMG00000182295.2 41156 803 5 ENSG00000215805.3 RP11-438O11.1 chr1 239972787 239974245 + processed_pseudogene KNOWN OTTHUMG00000039693.2 1459 1459 1 ENSG00000127528.5 KLF2 chr19 16324817 16327874 + protein_coding KNOWN OTTHUMG00000182330.1 3058 2018 5 ENSG00000277825.1 CTD-2013N17.7 chr19 16352462 16353182 - lincRNA NOVEL OTTHUMG00000186959.1 721 721 1 ENSG00000127527.12 EPS15L1 chr19 16355239 16472085 - protein_coding KNOWN OTTHUMG00000182361.2 116847 8431 203 ENSG00000280332.1 CTD-2013N17.6 chr19 16356329 16358327 - TEC KNOWN OTTHUMG00000182408.1 1999 1999 1 ENSG00000240418.1 CTD-2013N17.1 chr19 16412684 16413576 + processed_pseudogene KNOWN OTTHUMG00000158040.1 893 893 1 ENSG00000267703.1 CTD-2013N17.4 chr19 16440946 16443584 + antisense NOVEL OTTHUMG00000182332.1 2639 401 2 ENSG00000269058.4 CALR3 chr19 16479057 16496192 - protein_coding KNOWN OTTHUMG00000152571.3 17136 1460 16 ENSG00000141979.4 CTD-3222D19.2 chr19 16479067 16628204 - protein_coding NOVEL OTTHUMG00000182419.1 149138 2567 12 ENSG00000105072.7 C19orf44 chr19 16496311 16521352 + protein_coding KNOWN OTTHUMG00000182439.1 25042 4421 42 ENSG00000085872.13 CHERP chr19 16517889 16542530 - protein_coding KNOWN OTTHUMG00000169304.2 24642 6113 54 ENSG00000217327.3 RPS7P5 chr1 240012646 240013226 + processed_pseudogene KNOWN OTTHUMG00000039882.1 581 581 1 ENSG00000240106.2 RN7SL146P chr19 16539688 16539984 - misc_RNA KNOWN NA 297 297 1 ENSG00000269399.2 CTD-3222D19.12 chr19 16542746 16544814 + lincRNA NOVEL OTTHUMG00000186624.1 2069 2069 1 ENSG00000127526.12 SLC35E1 chr19 16549831 16572382 - protein_coding KNOWN OTTHUMG00000152575.3 22552 7257 39 ENSG00000268309.1 CTD-3222D19.11 chr19 16551773 16552328 + antisense NOVEL OTTHUMG00000182649.1 556 432 2 ENSG00000269085.1 CTD-3222D19.10 chr19 16565551 16566330 + antisense NOVEL OTTHUMG00000182560.1 780 190 2 ENSG00000279529.1 CTD-3222D19.8 chr19 16572624 16575340 + TEC KNOWN OTTHUMG00000182561.1 2717 2717 1 ENSG00000105085.9 MED26 chr19 16574907 16629062 - protein_coding KNOWN OTTHUMG00000182433.1 54156 5330 19 ENSG00000268790.4 CTC-429P9.4 chr19 16577642 16660115 - protein_coding NOVEL OTTHUMG00000182632.1 82474 1184 44 ENSG00000279748.1 CTD-3222D19.9 chr19 16586905 16589409 + TEC KNOWN OTTHUMG00000182562.1 2505 2505 1 ENSG00000269578.1 CTD-3222D19.5 chr19 16586905 16587985 - sense_intronic NOVEL OTTHUMG00000182434.1 1081 1081 1 ENSG00000224459.1 RP11-169K16.4 chr1 15740051 15749896 - antisense NOVEL OTTHUMG00000003078.1 9846 639 2 ENSG00000155816.18 FMN2 chr1 240014348 240475189 + protein_coding KNOWN OTTHUMG00000039883.4 460842 9691 53 ENSG00000279977.1 CTD-3222D19.4 chr19 16610374 16612203 - TEC KNOWN OTTHUMG00000182435.1 1830 1830 1 ENSG00000268087.1 CTC-429P9.2 chr19 16610411 16636531 + lincRNA NOVEL OTTHUMG00000182563.2 26121 376 2 ENSG00000269427.1 CTC-429P9.1 chr19 16630743 16643942 + antisense NOVEL OTTHUMG00000182564.2 13200 533 4 ENSG00000214046.7 SMIM7 chr19 16630751 16660442 - protein_coding KNOWN OTTHUMG00000149895.3 29692 6020 107 ENSG00000269044.2 CTC-429P9.3 chr19 16633797 16635269 - sense_intronic NOVEL OTTHUMG00000182633.2 1473 1473 1 ENSG00000267904.1 CTC-429P9.5 chr19 16639967 16640668 - sense_intronic NOVEL OTTHUMG00000182634.1 702 546 2 ENSG00000072954.5 TMEM38A chr19 16661127 16690029 + protein_coding KNOWN OTTHUMG00000182639.1 28903 3005 13 ENSG00000269419.1 CTD-2538G9.3 chr19 16712317 16712434 + processed_pseudogene KNOWN OTTHUMG00000182640.1 118 118 1 ENSG00000188039.12 NWD1 chr19 16719976 16817963 + protein_coding KNOWN OTTHUMG00000164507.4 97988 8495 113 ENSG00000269799.1 CTD-2538G9.6 chr19 16801426 16801714 + sense_intronic NOVEL OTTHUMG00000182641.1 289 221 2 ENSG00000228818.1 RP11-567G24.1 chr1 240142670 240145389 - processed_pseudogene KNOWN OTTHUMG00000039884.2 2720 2720 1 ENSG00000127511.8 SIN3B chr19 16829400 16880353 + protein_coding KNOWN OTTHUMG00000182642.2 50954 8777 87 ENSG00000268743.1 CTD-2538G9.5 chr19 16844025 16846473 + sense_intronic NOVEL OTTHUMG00000182643.1 2449 371 2 ENSG00000127533.3 F2RL3 chr19 16888860 16892606 + protein_coding KNOWN OTTHUMG00000182647.1 3747 3473 4 ENSG00000160111.11 CPAMD8 chr19 16892947 17026815 - protein_coding KNOWN OTTHUMG00000133549.3 133869 10199 153 ENSG00000264250.2 RN7SL835P chr19 16907462 16907723 + misc_RNA KNOWN NA 262 262 1 ENSG00000263595.2 RN7SL823P chr19 16910490 16910784 - misc_RNA KNOWN NA 295 295 1 ENSG00000280536.1 AC008737.1 chr19 16910496 16910579 - miRNA NOVEL NA 84 84 1 ENSG00000268985.1 CTD-2528A14.1 chr19 17009189 17013460 + antisense NOVEL OTTHUMG00000182648.1 4272 405 2 ENSG00000131351.13 HAUS8 chr19 17049729 17075625 - protein_coding KNOWN OTTHUMG00000182672.1 25897 5533 60 ENSG00000268289.1 CTD-2528A14.3 chr19 17051994 17055087 + antisense NOVEL OTTHUMG00000182673.1 3094 280 2 ENSG00000202041.1 Y_RNA chr1 240154651 240154772 - misc_RNA NOVEL NA 122 122 1 ENSG00000099331.12 MYO9B chr19 17075781 17214537 + protein_coding KNOWN OTTHUMG00000182707.1 138757 9948 222 ENSG00000269066.1 CTD-2528A14.5 chr19 17095418 17099307 - antisense NOVEL OTTHUMG00000182709.1 3890 610 2 ENSG00000268056.4 CTD-3032J10.2 chr19 17152588 17168051 - antisense NOVEL OTTHUMG00000182710.1 15464 495 7 ENSG00000269836.1 CTD-3032J10.4 chr19 17177511 17178476 - antisense NOVEL OTTHUMG00000182711.1 966 125 2 ENSG00000269480.1 CTD-3032J10.3 chr19 17207138 17208010 - antisense NOVEL OTTHUMG00000182712.1 873 629 2 ENSG00000053501.11 USE1 chr19 17215346 17219829 + protein_coding KNOWN OTTHUMG00000182723.1 4484 2431 59 ENSG00000099330.7 OCEL1 chr19 17226204 17229219 + protein_coding KNOWN OTTHUMG00000182726.1 3016 1867 62 ENSG00000160113.5 NR2F6 chr19 17231883 17245940 - protein_coding KNOWN OTTHUMG00000182728.1 14058 2676 7 ENSG00000269095.1 AC010646.3 chr19 17235940 17255448 - protein_coding NOVEL OTTHUMG00000182729.1 19509 515 5 ENSG00000130307.10 USHBP1 chr19 17249176 17282786 - protein_coding KNOWN OTTHUMG00000182730.1 33611 5175 72 ENSG00000223694.1 ADH5P3 chr1 240170155 240171291 + processed_pseudogene KNOWN OTTHUMG00000039885.1 1137 1137 1 ENSG00000105393.14 BABAM1 chr19 17267350 17281249 + protein_coding KNOWN OTTHUMG00000182755.1 13900 2607 111 ENSG00000269307.1 CTD-2278I10.6 chr19 17267418 17282966 + protein_coding NOVEL OTTHUMG00000182756.1 15549 1207 10 ENSG00000160117.13 ANKLE1 chr19 17281645 17287646 + protein_coding KNOWN OTTHUMG00000150839.4 6002 3569 59 ENSG00000127220.5 ABHD8 chr19 17292131 17310236 - protein_coding KNOWN OTTHUMG00000182663.1 18106 2210 10 ENSG00000130312.5 MRPL34 chr19 17292609 17306843 + protein_coding KNOWN OTTHUMG00000182764.1 14235 1686 16 ENSG00000269815.1 CTD-2278I10.4 chr19 17296196 17296695 - sense_intronic NOVEL OTTHUMG00000182664.1 500 500 1 ENSG00000130311.9 DDA1 chr19 17309518 17323301 + protein_coding KNOWN OTTHUMG00000182765.1 13784 4596 22 ENSG00000074855.9 ANO8 chr19 17323223 17334829 - protein_coding KNOWN OTTHUMG00000182665.1 11607 4979 51 ENSG00000130299.15 GTPBP3 chr19 17334920 17342735 + protein_coding KNOWN OTTHUMG00000182766.2 7816 4532 134 ENSG00000130300.7 PLVAP chr19 17351448 17377350 - protein_coding KNOWN OTTHUMG00000182784.1 25903 2305 13 ENSG00000233735.4 RP11-567G24.3 chr1 240177839 240179644 - antisense NOVEL OTTHUMG00000039886.1 1806 497 5 ENSG00000269350.1 CTD-2278I10.1 chr19 17360932 17362753 + antisense NOVEL OTTHUMG00000182666.1 1822 661 2 ENSG00000269720.1 CTD-2521M24.5 chr19 17391429 17392284 - lincRNA NOVEL OTTHUMG00000182789.1 856 856 1 ENSG00000130303.11 BST2 chr19 17402939 17405648 - protein_coding KNOWN OTTHUMG00000165993.2 2710 1119 12 ENSG00000269640.4 CTD-2521M24.9 chr19 17405694 17418904 + lincRNA NOVEL OTTHUMG00000182856.1 13211 2525 46 ENSG00000141971.11 MVB12A chr19 17405722 17433724 + protein_coding KNOWN OTTHUMG00000166252.4 28003 4053 83 ENSG00000269481.1 CTD-2521M24.6 chr19 17414257 17422324 - antisense NOVEL OTTHUMG00000182790.1 8068 691 2 ENSG00000254503.1 CTD-2521M24.4 chr19 17417031 17418288 - processed_pseudogene KNOWN OTTHUMG00000166259.2 1258 1258 1 ENSG00000269053.1 CTD-2521M24.8 chr19 17419305 17419774 - antisense NOVEL OTTHUMG00000182857.1 470 470 1 ENSG00000188051.6 TMEM221 chr19 17435509 17448567 - protein_coding KNOWN OTTHUMG00000182858.1 13059 2317 5 ENSG00000269035.1 CTD-2521M24.10 chr19 17436611 17460804 - protein_coding NOVEL OTTHUMG00000182859.1 24194 892 4 ENSG00000252317.1 Y_RNA chr1 240341385 240341477 + misc_RNA NOVEL NA 93 93 1 ENSG00000269736.1 CTD-2521M24.11 chr19 17452211 17452969 - lincRNA NOVEL OTTHUMG00000182860.1 759 759 1 ENSG00000171773.2 NXNL1 chr19 17455425 17460954 - protein_coding KNOWN OTTHUMG00000182798.1 5530 946 2 ENSG00000222805.1 AC010319.1 chr19 17457257 17457357 + miRNA NOVEL NA 101 101 1 ENSG00000130304.15 SLC27A1 chr19 17468769 17506168 + protein_coding KNOWN OTTHUMG00000182878.1 37400 8249 60 ENSG00000269439.4 CTD-3131K8.2 chr19 17488990 17511889 - lincRNA NOVEL OTTHUMG00000182861.2 22900 2067 9 ENSG00000130313.5 PGLS chr19 17511629 17521288 + protein_coding KNOWN OTTHUMG00000182879.1 9660 2847 25 ENSG00000269161.1 CTD-3131K8.3 chr19 17518330 17520565 - antisense NOVEL OTTHUMG00000182862.1 2236 460 2 ENSG00000167483.16 FAM129C chr19 17523301 17553839 + protein_coding KNOWN OTTHUMG00000182892.1 30539 6628 144 ENSG00000130309.9 COLGALT1 chr19 17555594 17583162 + protein_coding KNOWN OTTHUMG00000182893.1 27569 4900 34 ENSG00000243771.1 CTD-3131K8.1 chr19 17589595 17590071 - processed_pseudogene KNOWN OTTHUMG00000158041.1 477 477 1 ENSG00000233519.1 RP11-177F11.1 chr1 240400671 240401123 - antisense NOVEL OTTHUMG00000039911.1 453 316 2 ENSG00000130477.13 UNC13A chr19 17601328 17688365 - protein_coding KNOWN OTTHUMG00000163877.4 87038 11210 226 ENSG00000269752.1 CTD-3149D2.3 chr19 17613722 17614430 + antisense NOVEL OTTHUMG00000183199.1 709 419 2 ENSG00000279300.1 CTD-3149D2.2 chr19 17622447 17623338 + TEC KNOWN OTTHUMG00000183200.1 892 892 1 ENSG00000130479.9 MAP1S chr19 17719242 17734516 + protein_coding KNOWN OTTHUMG00000183292.1 15275 5040 95 ENSG00000268112.1 CTD-3149D2.4 chr19 17727840 17734513 - antisense NOVEL OTTHUMG00000183201.1 6674 217 3 ENSG00000130475.13 FCHO1 chr19 17747718 17788568 + protein_coding KNOWN OTTHUMG00000183293.5 40851 5694 375 ENSG00000179913.9 B3GNT3 chr19 17794828 17813082 + protein_coding KNOWN OTTHUMG00000183490.1 18255 2301 11 ENSG00000248099.3 INSL3 chr19 17816512 17821574 - protein_coding KNOWN OTTHUMG00000183481.1 5063 923 7 ENSG00000105639.17 JAK3 chr19 17824780 17848071 - protein_coding KNOWN OTTHUMG00000165648.1 23292 6813 105 ENSG00000105640.11 RPL18A chr19 17859876 17864153 + protein_coding KNOWN OTTHUMG00000183445.1 4278 3527 29 ENSG00000180875.4 GREM2 chr1 240489573 240612149 - protein_coding KNOWN OTTHUMG00000039909.1 122577 4170 2 ENSG00000207166.1 SNORA68 chr19 17862588 17862720 + snoRNA KNOWN NA 133 133 1 ENSG00000279617.1 AC005796.2 chr19 17871273 17871705 - TEC KNOWN OTTHUMG00000183446.1 433 433 1 ENSG00000105641.3 SLC5A5 chr19 17871973 17895174 + protein_coding KNOWN OTTHUMG00000183447.1 23202 3652 19 ENSG00000007080.9 CCDC124 chr19 17933016 17943991 + protein_coding KNOWN OTTHUMG00000183405.1 10976 1660 15 ENSG00000105642.14 KCNN1 chr19 17951293 18000080 + protein_coding KNOWN OTTHUMG00000183482.8 48788 3981 24 ENSG00000252591.1 RNA5SP468 chr19 17972025 17972117 + rRNA KNOWN NA 93 93 1 ENSG00000105643.8 ARRDC2 chr19 18001132 18014102 + protein_coding KNOWN OTTHUMG00000183483.5 12971 4637 42 ENSG00000279172.1 CTB-52I2.7 chr19 18009440 18009881 - TEC KNOWN OTTHUMG00000183484.1 442 442 1 ENSG00000273654.1 CTB-52I2.4 chr19 18022403 18032099 + transcribed_processed_pseudogene KNOWN OTTHUMG00000183486.7 9697 1736 3 ENSG00000268623.2 CTB-52I2.3 chr19 18040355 18041083 + processed_pseudogene KNOWN OTTHUMG00000183487.2 729 729 1 ENSG00000224359.2 RP11-467I20.2 chr1 240530452 240530862 + antisense NOVEL OTTHUMG00000039910.2 411 357 2 ENSG00000243455.3 RPS18P13 chr19 18048637 18049090 + processed_pseudogene KNOWN OTTHUMG00000158043.3 454 454 1 ENSG00000096996.14 IL12RB1 chr19 18058995 18098944 - protein_coding KNOWN OTTHUMG00000183417.7 39950 4298 62 ENSG00000099308.9 MAST3 chr19 18097793 18151692 + protein_coding KNOWN OTTHUMG00000183418.5 53900 6772 50 ENSG00000269145.2 AC007192.6 chr19 18144522 18151691 - antisense NOVEL OTTHUMG00000183419.2 7170 463 2 ENSG00000105647.13 PIK3R2 chr19 18153118 18170540 + protein_coding KNOWN OTTHUMG00000183383.4 17423 4524 70 ENSG00000268173.1 PIK3R2 chr19 18153158 18178117 + protein_coding KNOWN OTTHUMG00000150640.4 24960 5142 25 ENSG00000216490.3 IFI30 chr19 18173162 18178117 + protein_coding KNOWN OTTHUMG00000183373.4 4956 2481 15 ENSG00000254858.8 MPV17L2 chr19 18193182 18196948 + protein_coding KNOWN OTTHUMG00000165628.8 3767 2135 14 ENSG00000105649.8 RAB3A chr19 18196784 18204074 - protein_coding KNOWN OTTHUMG00000137378.4 7291 1818 14 ENSG00000268650.3 AC068499.10 chr19 18204730 18220480 + antisense NOVEL OTTHUMG00000183374.6 15751 1212 11 ENSG00000226014.1 RP11-467I20.4 chr1 240549867 240550378 - processed_pseudogene KNOWN OTTHUMG00000039930.1 512 204 2 ENSG00000105650.20 PDE4C chr19 18207961 18255419 - protein_coding KNOWN OTTHUMG00000183353.5 47459 8532 160 ENSG00000130518.15 KIAA1683 chr19 18257097 18274509 - protein_coding KNOWN OTTHUMG00000183354.8 17413 9154 32 ENSG00000130522.5 JUND chr19 18279760 18281622 - protein_coding KNOWN OTTHUMG00000183355.4 1863 1863 3 ENSG00000267959.3 MIR3188 chr19 18282077 18282161 + miRNA KNOWN NA 85 85 1 ENSG00000241464.3 RPL39P38 chr19 18285343 18285495 - processed_pseudogene KNOWN OTTHUMG00000158045.3 153 153 1 ENSG00000130520.9 LSM4 chr19 18306230 18323274 - protein_coding KNOWN OTTHUMG00000183357.9 17045 3029 25 ENSG00000239821.3 RN7SL513P chr19 18333276 18333573 + misc_RNA KNOWN NA 298 298 1 ENSG00000130517.12 PGPEP1 chr19 18340587 18369950 + protein_coding KNOWN OTTHUMG00000183358.7 29364 7520 39 ENSG00000130513.6 GDF15 chr19 18374731 18389176 + protein_coding KNOWN OTTHUMG00000183360.4 14446 2087 12 ENSG00000264175.1 MIR3189 chr19 18386562 18386634 + miRNA KNOWN NA 73 73 1 ENSG00000162460.6 TMEM82 chr1 15742422 15747982 + protein_coding KNOWN OTTHUMG00000003065.2 5561 1520 9 ENSG00000231440.1 RP11-467I20.6 chr1 240588522 240590748 - sense_intronic NOVEL OTTHUMG00000040729.1 2227 675 2 ENSG00000175489.9 LRRC25 chr19 18391144 18397617 - protein_coding KNOWN OTTHUMG00000183361.4 6474 2415 5 ENSG00000130511.14 SSBP4 chr19 18418864 18434562 + protein_coding KNOWN OTTHUMG00000183362.8 15699 2974 126 ENSG00000105655.17 ISYNA1 chr19 18434388 18438301 - protein_coding KNOWN OTTHUMG00000179027.8 3914 3284 92 ENSG00000268199.2 CTD-3137H5.1 chr19 18441419 18443597 + antisense NOVEL OTTHUMG00000183363.2 2179 599 2 ENSG00000105656.11 ELL chr19 18442663 18522127 - protein_coding KNOWN OTTHUMG00000183364.8 79465 4929 44 ENSG00000279262.1 CTD-3137H5.5 chr19 18448275 18448802 + TEC KNOWN OTTHUMG00000185939.1 528 528 1 ENSG00000280121.1 CTD-3137H5.4 chr19 18448275 18448805 - TEC KNOWN OTTHUMG00000185913.3 531 531 1 ENSG00000268938.2 AC005387.3 chr19 18531613 18532632 + antisense NOVEL OTTHUMG00000183367.2 1020 352 2 ENSG00000105701.14 FKBP8 chr19 18531751 18544077 - protein_coding KNOWN OTTHUMG00000183368.10 12327 2902 79 ENSG00000269191.1 AC005387.2 chr19 18532908 18536188 + antisense NOVEL OTTHUMG00000183369.1 3281 440 2 ENSG00000228844.1 RP11-467I20.3 chr1 240636599 240637052 - processed_pseudogene KNOWN OTTHUMG00000039929.1 454 454 1 ENSG00000105700.9 KXD1 chr19 18557762 18569387 + protein_coding KNOWN OTTHUMG00000183107.1 11626 4112 78 ENSG00000268030.1 AC005253.2 chr19 18557775 18561560 - antisense NOVEL OTTHUMG00000183108.1 3786 2001 2 ENSG00000268983.1 AC005253.4 chr19 18568506 18569375 - antisense NOVEL OTTHUMG00000183109.1 870 432 2 ENSG00000221983.6 UBA52 chr19 18571730 18577550 + protein_coding KNOWN OTTHUMG00000183110.2 5821 4306 63 ENSG00000006016.9 CRLF1 chr19 18572220 18607741 - protein_coding KNOWN OTTHUMG00000183111.1 35522 3018 20 ENSG00000006015.16 C19orf60 chr19 18588685 18592336 + protein_coding KNOWN OTTHUMG00000183112.1 3652 3370 29 ENSG00000105696.7 TMEM59L chr19 18607430 18621039 + protein_coding KNOWN OTTHUMG00000183113.2 13610 2626 33 ENSG00000263490.2 RN7SL155P chr19 18631646 18631908 - misc_RNA KNOWN NA 263 263 1 ENSG00000167487.10 KLHL26 chr19 18636965 18671714 + protein_coding KNOWN OTTHUMG00000183114.2 34750 4797 20 ENSG00000105662.14 CRTC1 chr19 18683677 18782333 + protein_coding KNOWN OTTHUMG00000183115.4 98657 6965 53 ENSG00000251750.1 RNU5F-8P chr1 240653367 240653477 + snRNA KNOWN NA 111 111 1 ENSG00000105664.9 COMP chr19 18782773 18791314 - protein_coding KNOWN OTTHUMG00000169318.3 8542 3101 58 ENSG00000005007.11 UPF1 chr19 18831938 18868236 + protein_coding KNOWN OTTHUMG00000183025.2 36299 8600 97 ENSG00000130283.8 GDF1 chr19 18868545 18896096 - protein_coding KNOWN OTTHUMG00000183278.2 27552 2517 8 ENSG00000223802.6 CERS1 chr19 18868545 18896727 - protein_coding KNOWN OTTHUMG00000183049.2 28183 3753 33 ENSG00000269694.1 AC005197.2 chr19 18881680 18883376 + antisense NOVEL OTTHUMG00000183051.1 1697 683 2 ENSG00000105669.11 COPE chr19 18899514 18919397 - protein_coding KNOWN OTTHUMG00000183052.1 19884 2885 81 ENSG00000268193.4 AC002985.3 chr19 18907013 18934397 - protein_coding NOVEL OTTHUMG00000182999.2 27385 685 13 ENSG00000105671.10 DDX49 chr19 18919675 18928633 + protein_coding KNOWN OTTHUMG00000182994.1 8959 2780 103 ENSG00000051128.17 HOMER3 chr19 18929201 18941261 - protein_coding KNOWN OTTHUMG00000182995.1 12061 3422 87 ENSG00000269019.1 AC005932.1 chr19 18940322 18946831 + antisense NOVEL OTTHUMG00000182996.1 6510 957 3 ENSG00000234872.2 RP11-467I20.5 chr1 240654241 240654625 + processed_pseudogene KNOWN OTTHUMG00000039931.2 385 385 1 ENSG00000241172.3 RN7SL70P chr19 18957957 18958258 - misc_RNA KNOWN NA 302 302 1 ENSG00000064607.15 SUGP2 chr19 18990888 19034023 - protein_coding KNOWN OTTHUMG00000182997.2 43136 7744 111 ENSG00000269131.1 AC004447.2 chr19 18990893 18993610 + antisense NOVEL OTTHUMG00000182998.1 2718 2416 2 ENSG00000105676.12 ARMC6 chr19 19033575 19060311 + protein_coding KNOWN OTTHUMG00000169271.4 26737 4052 103 ENSG00000181035.12 SLC25A42 chr19 19063999 19112888 + protein_coding KNOWN OTTHUMG00000183280.1 48890 4519 26 ENSG00000064545.13 TMEM161A chr19 19119169 19138513 - protein_coding KNOWN OTTHUMG00000182217.6 19345 3281 112 ENSG00000064489.20 MEF2BNB-MEF2B chr19 19145567 19192158 - protein_coding KNOWN OTTHUMG00000154572.7 46592 1931 84 ENSG00000213999.14 MEF2B chr19 19145568 19170289 - protein_coding KNOWN OTTHUMG00000161595.4 24722 1848 34 ENSG00000254901.6 MEF2BNB chr19 19176903 19192591 - protein_coding KNOWN OTTHUMG00000166546.4 15689 5372 36 ENSG00000064490.12 RFXANK chr19 19192229 19201869 + protein_coding KNOWN OTTHUMG00000169224.6 9641 2503 83 ENSG00000199241.1 Y_RNA chr1 240698320 240698429 + misc_RNA NOVEL NA 110 110 1 ENSG00000184162.13 NR2C2AP chr19 19201416 19203424 - protein_coding KNOWN OTTHUMG00000169225.6 2009 1794 28 ENSG00000130287.12 NCAN chr19 19211973 19252233 + protein_coding KNOWN OTTHUMG00000182218.5 40261 6905 28 ENSG00000252973.1 RNU6-1028P chr19 19232855 19232947 + snRNA KNOWN NA 93 93 1 ENSG00000267629.3 AC138430.4 chr19 19254748 19273369 - processed_transcript NOVEL OTTHUMG00000182219.3 18622 5409 12 ENSG00000280282.1 LLNLR-259H9.1 chr19 19255638 19256141 + TEC KNOWN OTTHUMG00000185809.2 504 504 1 ENSG00000187664.8 HAPLN4 chr19 19255641 19262796 - protein_coding KNOWN OTTHUMG00000182221.4 7156 3569 8 ENSG00000213996.11 TM6SF2 chr19 19264364 19273391 - protein_coding KNOWN OTTHUMG00000182222.5 9028 2188 30 ENSG00000105705.14 SUGP1 chr19 19276018 19320844 - protein_coding KNOWN OTTHUMG00000182223.8 44827 5356 110 ENSG00000129933.19 MAU2 chr19 19320681 19358755 + protein_coding KNOWN OTTHUMG00000150188.12 38075 11145 102 ENSG00000167491.16 GATAD2A chr19 19385826 19508931 + protein_coding KNOWN OTTHUMG00000152541.8 123106 7296 78 ENSG00000230015.3 RP11-80B9.4 chr1 240739419 240739853 - lincRNA NOVEL OTTHUMG00000040503.2 435 435 1 ENSG00000267234.1 CTB-184G21.3 chr19 19401979 19402603 - antisense NOVEL OTTHUMG00000185868.1 625 488 2 ENSG00000207821.1 MIR640 chr19 19435063 19435158 + miRNA KNOWN NA 96 96 1 ENSG00000178093.13 TSSK6 chr19 19512418 19515685 - protein_coding KNOWN OTTHUMG00000182146.4 3268 1666 5 ENSG00000186010.17 NDUFA13 chr19 19515736 19529054 + protein_coding KNOWN OTTHUMG00000162211.8 13319 2708 29 ENSG00000258674.5 CTC-260F20.3 chr19 19516227 19536076 + protein_coding NOVEL OTTHUMG00000171813.7 19850 1846 15 ENSG00000250067.10 YJEFN3 chr19 19528861 19537581 + protein_coding KNOWN OTTHUMG00000162251.9 8721 2959 19 ENSG00000160161.8 CILP2 chr19 19538248 19546659 + protein_coding KNOWN OTTHUMG00000182148.4 8412 4360 19 ENSG00000105717.12 PBX4 chr19 19561707 19618916 - protein_coding KNOWN OTTHUMG00000172310.7 57210 2554 26 ENSG00000267178.3 PHF5CP chr19 19588091 19588415 - processed_pseudogene KNOWN OTTHUMG00000182149.3 325 325 1 ENSG00000259242.2 AC002306.1 chr19 19606350 19608660 + antisense NOVEL OTTHUMG00000172311.2 2311 937 2 ENSG00000226919.1 RP11-80B9.1 chr1 240765557 240768680 + antisense NOVEL OTTHUMG00000039932.1 3124 572 2 ENSG00000064547.12 LPAR2 chr19 19623668 19628930 - protein_coding KNOWN OTTHUMG00000182328.1 5263 2980 28 ENSG00000089639.9 GMIP chr19 19629476 19643667 - protein_coding KNOWN OTTHUMG00000182329.1 14192 3740 82 ENSG00000105726.15 ATP13A1 chr19 19645198 19663693 - protein_coding KNOWN OTTHUMG00000153016.2 18496 8376 132 ENSG00000181896.10 ZNF101 chr19 19668796 19683509 + protein_coding KNOWN OTTHUMG00000167736.3 14714 6560 28 ENSG00000271283.1 CTC-412M14.6 chr19 19699203 19699409 - processed_pseudogene KNOWN OTTHUMG00000184911.1 207 207 1 ENSG00000270402.1 CTC-412M14.5 chr19 19708965 19710465 + processed_pseudogene KNOWN OTTHUMG00000184899.1 1501 617 2 ENSG00000105708.8 ZNF14 chr19 19710471 19733097 - protein_coding KNOWN OTTHUMG00000182362.1 22627 2949 4 ENSG00000275540.1 CTC-559E9.12 chr19 19740884 19750127 + unprocessed_pseudogene KNOWN OTTHUMG00000187971.1 9244 1440 13 ENSG00000271499.1 CTC-559E9.9 chr19 19750618 19752544 + processed_pseudogene KNOWN OTTHUMG00000184902.1 1927 1927 1 ENSG00000266904.4 CTC-559E9.1 chr19 19757366 19776423 - lincRNA NOVEL OTTHUMG00000182363.1 19058 4334 21 ENSG00000223963.2 PRKRIRP8 chr1 240769420 240771534 - processed_pseudogene KNOWN OTTHUMG00000039933.2 2115 2115 1 ENSG00000267581.1 CTC-559E9.4 chr19 19761038 19821716 - lincRNA NOVEL OTTHUMG00000182364.1 60679 609 3 ENSG00000267693.1 CTC-559E9.2 chr19 19768731 19768989 + processed_pseudogene KNOWN OTTHUMG00000182365.1 259 259 1 ENSG00000267419.1 CTC-559E9.6 chr19 19776602 19834927 + processed_transcript NOVEL OTTHUMG00000182366.1 58326 1181 10 ENSG00000081665.12 ZNF506 chr19 19785839 19821751 - protein_coding KNOWN OTTHUMG00000182367.2 35913 8414 47 ENSG00000267481.1 CTC-559E9.5 chr19 19788755 19790531 - sense_intronic NOVEL OTTHUMG00000182368.1 1777 921 2 ENSG00000279843.1 AC011477.2 chr19 19835158 19836016 + pseudogene NOVEL NA 859 855 2 ENSG00000270325.1 BNIP3P9 chr19 19856975 19857527 + processed_pseudogene KNOWN OTTHUMG00000184913.1 553 553 1 ENSG00000256771.2 ZNF253 chr19 19865886 19894674 + protein_coding KNOWN OTTHUMG00000182369.1 28789 3626 11 ENSG00000270270.1 BNIP3P10 chr19 19870723 19871299 - processed_pseudogene KNOWN OTTHUMG00000184904.1 577 577 1 ENSG00000265339.1 AC011477.1 chr19 19891159 19891241 + miRNA NOVEL NA 83 83 1 ENSG00000182901.14 RGS7 chr1 240775514 241357230 - protein_coding KNOWN OTTHUMG00000040107.4 581717 2578 127 ENSG00000267565.1 CTC-559E9.8 chr19 19892433 19895847 - antisense NOVEL OTTHUMG00000182370.1 3415 403 2 ENSG00000184635.12 ZNF93 chr19 19900913 19935575 + protein_coding KNOWN OTTHUMG00000182371.2 34663 4888 28 ENSG00000267268.1 AC007204.2 chr19 19900968 19963464 + lincRNA NOVEL OTTHUMG00000182372.1 62497 763 4 ENSG00000273791.1 CTC-559E9.13 chr19 19908268 19909146 - unprocessed_pseudogene KNOWN OTTHUMG00000187980.1 879 555 2 ENSG00000274800.1 AC007204.3 chr19 19978190 19979610 - unprocessed_pseudogene KNOWN OTTHUMG00000187981.1 1421 616 3 ENSG00000197124.10 ZNF682 chr19 19997058 20039506 - protein_coding KNOWN OTTHUMG00000182650.1 42449 4968 47 ENSG00000264441.1 AC006539.1 chr19 20027027 20027117 - miRNA NOVEL NA 91 91 1 ENSG00000268070.1 AC006539.3 chr19 20033444 20034332 + processed_pseudogene KNOWN OTTHUMG00000182651.1 889 572 2 ENSG00000274033.1 AC006539.6 chr19 20056466 20056594 - unprocessed_pseudogene KNOWN OTTHUMG00000187982.1 129 129 1 ENSG00000269154.1 BNIP3P13 chr19 20062755 20063320 + processed_pseudogene KNOWN OTTHUMG00000182652.1 566 566 1 ENSG00000215802.3 RFKP1 chr1 240823006 240823433 - transcribed_processed_pseudogene KNOWN OTTHUMG00000040502.2 428 428 1 ENSG00000213988.8 ZNF90 chr19 20077994 20127076 + protein_coding KNOWN OTTHUMG00000158057.2 49083 5025 25 ENSG00000240673.1 AC006539.2 chr19 20079818 20080539 - processed_pseudogene KNOWN OTTHUMG00000158068.1 722 501 2 ENSG00000274612.1 CTC-260E6.12 chr19 20087013 20087576 - processed_pseudogene KNOWN OTTHUMG00000187983.1 564 564 1 ENSG00000224864.4 CTC-260E6.2 chr19 20125044 20125484 + transcribed_processed_pseudogene KNOWN OTTHUMG00000158058.1 441 441 1 ENSG00000267383.5 CTC-260E6.6 chr19 20125377 20321305 - antisense NOVEL OTTHUMG00000180742.2 195929 3684 17 ENSG00000267220.1 CTC-260E6.9 chr19 20131894 20151908 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000180743.1 20015 283 3 ENSG00000270716.1 BNIP3P15 chr19 20136933 20137233 + processed_pseudogene KNOWN OTTHUMG00000184918.1 301 301 1 ENSG00000256229.6 ZNF486 chr19 20167228 20200490 + protein_coding KNOWN OTTHUMG00000179731.2 33263 4261 8 ENSG00000267641.1 BNIP3P16 chr19 20175013 20177063 - processed_pseudogene KNOWN OTTHUMG00000180744.1 2051 534 2 ENSG00000267771.1 CTC-260E6.7 chr19 20206844 20206954 - unprocessed_pseudogene KNOWN OTTHUMG00000180745.1 111 111 1 ENSG00000162458.11 FBLIM1 chr1 15756607 15786594 + protein_coding KNOWN OTTHUMG00000003079.5 29988 4716 72 ENSG00000233615.1 HNRNPA1P42 chr1 240919653 240920609 + processed_pseudogene KNOWN OTTHUMG00000040728.1 957 957 1 ENSG00000279039.1 CTC-260E6.3 chr19 20207192 20209789 - TEC KNOWN OTTHUMG00000175722.1 2598 2598 1 ENSG00000280079.1 CTC-260E6.4 chr19 20220597 20222186 - TEC KNOWN OTTHUMG00000175724.1 1590 1590 1 ENSG00000271524.1 BNIP3P17 chr19 20221869 20222463 + processed_pseudogene KNOWN OTTHUMG00000184916.1 595 595 1 ENSG00000268620.1 AC078899.4 chr19 20249052 20250295 + unprocessed_pseudogene KNOWN OTTHUMG00000182653.1 1244 212 2 ENSG00000213985.4 AC078899.1 chr19 20257720 20259418 + processed_pseudogene KNOWN OTTHUMG00000163623.2 1699 1185 2 ENSG00000269055.1 BNIP3P18 chr19 20267817 20268391 + processed_pseudogene KNOWN OTTHUMG00000182654.1 575 575 1 ENSG00000269274.1 AC078899.3 chr19 20295089 20303794 + unprocessed_pseudogene KNOWN OTTHUMG00000182655.1 8706 1113 3 ENSG00000266609.1 AC078899.2 chr19 20302590 20302672 + miRNA NOVEL NA 83 83 1 ENSG00000271638.1 BNIP3P19 chr19 20323992 20324568 - processed_pseudogene KNOWN OTTHUMG00000184921.1 577 577 1 ENSG00000276294.1 CTC-575C13.3 chr19 20330121 20331517 + unprocessed_pseudogene KNOWN OTTHUMG00000187984.1 1397 178 2 ENSG00000238085.1 RP11-435F13.2 chr1 240998451 240998794 - processed_pseudogene KNOWN OTTHUMG00000040749.1 344 344 1 ENSG00000231205.10 ZNF826P chr19 20340269 20424969 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000162773.4 84701 6008 22 ENSG00000271704.1 BNIP3P20 chr19 20351502 20352079 + processed_pseudogene KNOWN OTTHUMG00000184908.1 578 578 1 ENSG00000268461.2 CTC-575C13.4 chr19 20389658 20390689 + unprocessed_pseudogene KNOWN OTTHUMG00000187985.1 1032 212 2 ENSG00000238517.1 MIR1270 chr19 20399272 20399354 - miRNA KNOWN NA 83 83 1 ENSG00000268174.1 BNIP3P22 chr19 20416514 20417069 + processed_pseudogene KNOWN OTTHUMG00000182681.1 556 556 1 ENSG00000269043.1 CTC-513N18.6 chr19 20432552 20528615 + lincRNA NOVEL OTTHUMG00000182682.1 96064 811 4 ENSG00000268335.1 BNIP3P23 chr19 20443215 20443725 - processed_pseudogene KNOWN OTTHUMG00000182683.1 511 511 1 ENSG00000237440.7 ZNF737 chr19 20535825 20565809 - protein_coding KNOWN OTTHUMG00000179732.2 29985 3539 18 ENSG00000188171.13 ZNF626 chr19 20544571 20863281 - protein_coding KNOWN OTTHUMG00000179733.2 318711 7587 32 ENSG00000269110.1 CTC-513N18.7 chr19 20553792 20661583 - lincRNA NOVEL OTTHUMG00000182684.1 107792 522 5 ENSG00000265831.1 MIR3123 chr1 241132272 241132346 + miRNA KNOWN NA 75 75 1 ENSG00000268272.1 VN1R78P chr19 20583084 20583647 - unprocessed_pseudogene KNOWN OTTHUMG00000182741.1 564 564 1 ENSG00000268560.1 CTD-2332E11.2 chr19 20611559 20615389 + lincRNA NOVEL OTTHUMG00000182685.1 3831 628 2 ENSG00000280171.1 CTD-2542C24.14 chr19 20674923 20696533 + unprocessed_pseudogene KNOWN OTTHUMG00000189491.1 21611 2174 4 ENSG00000269779.1 CTD-2542C24.2 chr19 20691336 20697615 + unprocessed_pseudogene KNOWN OTTHUMG00000182742.1 6280 2737 2 ENSG00000268416.1 CTD-2626G11.2 chr19 20746923 20755250 - lincRNA NOVEL OTTHUMG00000182743.1 8328 8328 1 ENSG00000269885.1 VN1R79P chr19 20758440 20758952 + unprocessed_pseudogene KNOWN OTTHUMG00000182744.1 513 513 1 ENSG00000160229.10 ZNF66 chr19 20776304 20807322 + protein_coding KNOWN OTTHUMG00000167735.3 31019 3009 11 ENSG00000269040.1 BNIP3P24 chr19 20784596 20785152 - processed_pseudogene KNOWN OTTHUMG00000182745.1 557 557 1 ENSG00000266156.1 AC010329.1 chr19 20805511 20805594 + miRNA NOVEL NA 84 84 1 ENSG00000269373.1 CTD-2542C24.3 chr19 20838515 20847417 - unprocessed_pseudogene KNOWN OTTHUMG00000182746.1 8903 317 3 ENSG00000224348.2 RP11-306K13.1 chr1 241305580 241305882 - processed_pseudogene KNOWN OTTHUMG00000039599.2 303 303 1 ENSG00000105750.13 ZNF85 chr19 20923222 20950697 + protein_coding KNOWN OTTHUMG00000182747.3 27476 4668 50 ENSG00000279404.1 CTD-2542C24.5 chr19 20926777 20928714 - TEC KNOWN OTTHUMG00000182767.1 1938 1938 1 ENSG00000269012.2 KRT18P40 chr19 20961057 20965140 + unprocessed_pseudogene KNOWN OTTHUMG00000189492.1 4084 1571 3 ENSG00000268326.1 CTD-2542C24.8 chr19 20972262 20983210 + lincRNA NOVEL OTTHUMG00000182770.1 10949 575 2 ENSG00000118620.11 ZNF430 chr19 21020620 21060050 + protein_coding KNOWN OTTHUMG00000182771.1 39431 6845 24 ENSG00000271598.1 CTD-2542C24.9 chr19 21025915 21026041 - processed_pseudogene KNOWN OTTHUMG00000184933.1 127 127 1 ENSG00000265650.1 AC012627.1 chr19 21056003 21056080 + miRNA NOVEL NA 78 78 1 ENSG00000268598.1 VN1R80P chr19 21063924 21064261 + unprocessed_pseudogene KNOWN OTTHUMG00000182832.1 338 338 1 ENSG00000160352.14 ZNF714 chr19 21082159 21125270 + protein_coding KNOWN OTTHUMG00000182833.3 43112 8033 45 ENSG00000201035.1 RNA5SP469 chr19 21113128 21113236 - rRNA KNOWN NA 109 109 1 ENSG00000225554.1 RP11-527D7.1 chr1 241424292 241433492 + lincRNA NOVEL OTTHUMG00000039598.1 9201 668 5 ENSG00000268357.1 VN1R81P chr19 21123817 21124188 + unprocessed_pseudogene KNOWN OTTHUMG00000182834.1 372 372 1 ENSG00000196705.7 ZNF431 chr19 21142024 21196053 + protein_coding KNOWN OTTHUMG00000182835.2 54030 14132 30 ENSG00000240522.1 RPL7AP10 chr19 21149648 21150438 - processed_pseudogene KNOWN OTTHUMG00000158087.1 791 791 1 ENSG00000268995.1 VN1R82P chr19 21188598 21188953 + unprocessed_pseudogene KNOWN OTTHUMG00000182836.1 356 356 1 ENSG00000182141.8 ZNF708 chr19 21221500 21329425 - protein_coding KNOWN OTTHUMG00000182841.1 107926 4956 31 ENSG00000268892.1 CTD-3233P19.8 chr19 21221645 21222746 - unprocessed_pseudogene KNOWN OTTHUMG00000182837.1 1102 1102 1 ENSG00000269839.1 CTD-3233P19.7 chr19 21225098 21245241 - unprocessed_pseudogene KNOWN OTTHUMG00000182838.1 20144 313 3 ENSG00000242291.1 RPL36AP51 chr19 21233335 21233652 + processed_pseudogene KNOWN OTTHUMG00000158088.1 318 318 1 ENSG00000268747.1 CTD-3030D20.1 chr19 21276023 21276332 - processed_pseudogene KNOWN OTTHUMG00000182839.1 310 310 1 ENSG00000268521.1 VN1R83P chr19 21289554 21289998 - unprocessed_pseudogene KNOWN OTTHUMG00000182840.1 445 445 1 ENSG00000091483.6 FH chr1 241497603 241519761 - protein_coding KNOWN OTTHUMG00000039597.3 22159 2142 15 ENSG00000268322.1 BNIP3P25 chr19 21318161 21318719 + processed_pseudogene KNOWN OTTHUMG00000182842.1 559 559 1 ENSG00000172687.12 ZNF738 chr19 21358930 21379302 + protein_coding KNOWN OTTHUMG00000141298.2 20373 3905 23 ENSG00000268731.1 CTD-2561J22.1 chr19 21381220 21381921 - processed_pseudogene KNOWN OTTHUMG00000182843.1 702 394 2 ENSG00000213976.4 CTD-2561J22.2 chr19 21382865 21387177 + unprocessed_pseudogene KNOWN OTTHUMG00000182844.1 4313 1764 3 ENSG00000196268.10 ZNF493 chr19 21397119 21427573 + protein_coding KNOWN OTTHUMG00000141297.2 30455 11214 26 ENSG00000269237.1 CTD-2561J22.3 chr19 21405159 21491266 + protein_coding NOVEL OTTHUMG00000182845.1 86108 472 5 ENSG00000268119.4 CTD-2561J22.5 chr19 21444241 21463908 - processed_transcript NOVEL OTTHUMG00000182846.1 19668 5146 23 ENSG00000268658.4 LINC00664 chr19 21483374 21503238 + lincRNA NOVEL OTTHUMG00000182847.1 19865 5889 27 ENSG00000197013.8 ZNF429 chr19 21496682 21556270 + protein_coding KNOWN OTTHUMG00000182848.1 59589 5054 39 ENSG00000268705.1 BNIP3P26 chr19 21521343 21521896 - processed_pseudogene KNOWN OTTHUMG00000182849.1 554 554 1 ENSG00000117009.10 KMO chr1 241532134 241595642 + protein_coding KNOWN OTTHUMG00000039635.2 63509 5946 85 ENSG00000268081.1 RP11-678G14.2 chr19 21554640 21569237 - antisense NOVEL OTTHUMG00000182850.1 14598 447 2 ENSG00000268555.1 RP11-678G14.3 chr19 21570822 21587322 - lincRNA NOVEL OTTHUMG00000182863.1 16501 1178 2 ENSG00000268240.1 RP11-678G14.4 chr19 21587432 21594628 - lincRNA NOVEL OTTHUMG00000182864.2 7197 2612 4 ENSG00000274503.1 RP11-678G14.6 chr19 21592727 21593041 + unprocessed_pseudogene KNOWN OTTHUMG00000187986.1 315 315 1 ENSG00000271182.1 RP11-678G14.5 chr19 21634833 21635175 - processed_pseudogene KNOWN OTTHUMG00000184934.1 343 343 1 ENSG00000268278.1 RP11-420K14.1 chr19 21637974 21656300 + unprocessed_pseudogene KNOWN OTTHUMG00000182868.1 18327 1367 3 ENSG00000268433.1 RP11-420K14.2 chr19 21677550 21678221 - processed_pseudogene KNOWN OTTHUMG00000182869.1 672 672 1 ENSG00000268535.1 RP11-420K14.3 chr19 21709522 21710191 + processed_pseudogene KNOWN OTTHUMG00000182870.1 670 670 1 ENSG00000268117.1 VN1R84P chr19 21719801 21720035 - unprocessed_pseudogene KNOWN OTTHUMG00000182871.1 235 235 1 ENSG00000197020.9 ZNF100 chr19 21722766 21767628 - protein_coding KNOWN OTTHUMG00000182872.1 44863 6612 29 ENSG00000054277.11 OPN3 chr1 241590102 241677376 - protein_coding KNOWN OTTHUMG00000039691.3 87275 3442 23 ENSG00000269845.1 RP11-420K14.6 chr19 21750747 21753438 + transcribed_processed_pseudogene KNOWN OTTHUMG00000182873.1 2692 2692 2 ENSG00000265084.1 AC092364.1 chr19 21753011 21753083 + miRNA NOVEL NA 73 73 1 ENSG00000268184.1 RP11-420K14.8 chr19 21768772 21793860 - lincRNA NOVEL OTTHUMG00000182897.1 25089 921 4 ENSG00000269136.1 BRI3BPP1 chr19 21800480 21801266 + processed_pseudogene KNOWN OTTHUMG00000182874.1 787 787 1 ENSG00000198521.10 ZNF43 chr19 21804949 21852125 - protein_coding KNOWN OTTHUMG00000128543.2 47177 8649 52 ENSG00000268438.1 BNIP3P27 chr19 21826513 21827279 + processed_pseudogene KNOWN OTTHUMG00000182899.1 767 412 2 ENSG00000160321.13 ZNF208 chr19 21932958 22010949 - protein_coding KNOWN OTTHUMG00000182913.1 77992 6867 30 ENSG00000269615.1 AC003973.1 chr19 21940820 21941533 + processed_pseudogene KNOWN OTTHUMG00000182900.1 714 714 1 ENSG00000279377.1 AC003973.3 chr19 21965708 21968529 - TEC KNOWN OTTHUMG00000182914.1 2822 2822 1 ENSG00000271095.1 BNIP3P28 chr19 21997648 21998840 + processed_pseudogene KNOWN OTTHUMG00000184935.1 1193 1193 1 ENSG00000203668.1 CHML chr1 241628853 241635930 - protein_coding KNOWN OTTHUMG00000039690.1 7078 7078 1 ENSG00000269504.1 AC003973.4 chr19 22017959 22036315 - lincRNA NOVEL OTTHUMG00000182925.1 18357 1394 9 ENSG00000269199.1 AC003973.5 chr19 22043500 22050005 - lincRNA NOVEL OTTHUMG00000182926.1 6506 546 4 ENSG00000197134.10 ZNF257 chr19 22052452 22091480 + protein_coding KNOWN OTTHUMG00000182927.1 39029 5029 28 ENSG00000269742.1 BNIP3P29 chr19 22065828 22066398 - processed_pseudogene KNOWN OTTHUMG00000182928.1 571 571 1 ENSG00000269505.2 ZNF92P2 chr19 22128627 22130318 - processed_pseudogene KNOWN OTTHUMG00000182929.1 1692 1059 3 ENSG00000268116.1 RP11-157B13.1 chr19 22130325 22130489 + processed_pseudogene KNOWN OTTHUMG00000182930.1 165 165 1 ENSG00000268140.1 PCGF7P chr19 22137931 22138981 + processed_pseudogene KNOWN OTTHUMG00000182931.1 1051 1051 1 ENSG00000269575.1 RP11-157B13.3 chr19 22140532 22141117 + processed_pseudogene KNOWN OTTHUMG00000182932.1 586 586 1 ENSG00000269345.1 VN1R85P chr19 22174766 22175191 - unprocessed_pseudogene KNOWN OTTHUMG00000182933.1 426 426 1 ENSG00000196109.6 ZNF676 chr19 22179091 22196951 - protein_coding KNOWN OTTHUMG00000182934.1 17861 2944 3 ENSG00000162843.16 WDR64 chr1 241652278 241802133 + protein_coding KNOWN OTTHUMG00000039705.13 149856 4939 107 ENSG00000268079.1 BNIP3P30 chr19 22203128 22204003 + processed_pseudogene KNOWN OTTHUMG00000182935.1 876 574 2 ENSG00000267872.1 RP11-157B13.7 chr19 22243254 22245347 - lincRNA NOVEL OTTHUMG00000182936.1 2094 2094 1 ENSG00000268597.1 RP11-157B13.8 chr19 22259693 22261335 + lincRNA NOVEL OTTHUMG00000182937.1 1643 386 2 ENSG00000196350.8 ZNF729 chr19 22286408 22317176 + protein_coding KNOWN OTTHUMG00000182938.1 30769 3877 4 ENSG00000270191.1 BNIP3P31 chr19 22298977 22299868 - processed_pseudogene KNOWN OTTHUMG00000184950.1 892 566 2 ENSG00000268685.1 CTB-31C7.3 chr19 22362589 22362825 + processed_pseudogene KNOWN OTTHUMG00000182939.1 237 237 1 ENSG00000236312.3 RPL34P34 chr19 22368599 22368952 - processed_pseudogene KNOWN OTTHUMG00000158097.1 354 354 1 ENSG00000197360.8 ZNF98 chr19 22391019 22532485 - protein_coding KNOWN OTTHUMG00000182940.2 141467 3291 17 ENSG00000269796.1 AC011516.1 chr19 22422513 22426045 + lincRNA NOVEL OTTHUMG00000182941.1 3533 180 2 ENSG00000268830.1 BNIP3P32 chr19 22447934 22448777 - processed_pseudogene KNOWN OTTHUMG00000182977.1 844 554 2 ENSG00000280788.1 Metazoa_SRP chr1 15763490 15763757 + misc_RNA NOVEL NA 268 268 1 ENSG00000229022.1 RP11-553N16.1 chr1 241831935 241832787 + processed_pseudogene KNOWN OTTHUMG00000039964.1 853 853 1 ENSG00000270947.1 AC025811.3 chr19 22455988 22456459 + lincRNA NOVEL OTTHUMG00000184951.1 472 472 1 ENSG00000268717.1 BNIP3P33 chr19 22457329 22458212 - processed_pseudogene KNOWN OTTHUMG00000182978.1 884 569 2 ENSG00000269138.1 ZNF209P chr19 22463922 22473036 + unprocessed_pseudogene KNOWN OTTHUMG00000182979.1 9115 2304 3 ENSG00000270317.1 AC004004.2 chr19 22501699 22501948 - processed_pseudogene KNOWN OTTHUMG00000184952.1 250 250 1 ENSG00000260599.1 CTC-457E21.1 chr19 22520995 22527949 - sense_intronic NOVEL OTTHUMG00000175727.1 6955 3355 5 ENSG00000269364.1 LINC01233 chr19 22532626 22533494 + lincRNA NOVEL OTTHUMG00000182980.1 869 685 7 ENSG00000207397.1 RNU6-1179P chr19 22555261 22555367 + snRNA KNOWN NA 107 107 1 ENSG00000271149.1 CTC-457E21.10 chr19 22595479 22596163 - unprocessed_pseudogene KNOWN OTTHUMG00000184953.1 685 320 3 ENSG00000269332.4 GOLGA2P9 chr19 22596257 22603550 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000182981.1 7294 2648 29 ENSG00000240713.3 RN7SL860P chr19 22601485 22601707 + misc_RNA KNOWN NA 223 223 1 ENSG00000174371.15 EXO1 chr1 241847967 241895148 + protein_coding KNOWN OTTHUMG00000039965.6 47182 4140 84 ENSG00000221790.1 AC011467.1 chr19 22602706 22602788 + miRNA NOVEL NA 83 83 1 ENSG00000268823.2 CTC-457E21.6 chr19 22603269 22608501 + processed_transcript NOVEL OTTHUMG00000182982.1 5233 429 4 ENSG00000269025.2 CTC-457E21.5 chr19 22605739 22608211 + transcribed_processed_pseudogene KNOWN OTTHUMG00000182983.1 2473 607 4 ENSG00000269316.1 CTC-457E21.4 chr19 22609606 22610601 + processed_pseudogene KNOWN OTTHUMG00000182984.1 996 996 1 ENSG00000268038.1 AC011516.2 chr19 22615557 22623971 - lincRNA NOVEL OTTHUMG00000182985.1 8415 1112 2 ENSG00000268589.1 CTC-457E21.7 chr19 22620483 22620724 + unprocessed_pseudogene KNOWN OTTHUMG00000182986.1 242 242 1 ENSG00000229676.2 ZNF492 chr19 22634324 22667670 + protein_coding KNOWN OTTHUMG00000182987.1 33347 4245 4 ENSG00000268981.4 CTC-457E21.9 chr19 22665552 22716991 - antisense NOVEL OTTHUMG00000182988.1 51440 870 7 ENSG00000198153.8 ZNF849P chr19 22685167 22686732 + unprocessed_pseudogene KNOWN OTTHUMG00000182989.1 1566 1566 1 ENSG00000241282.1 RPL34P33 chr19 22699352 22699685 + processed_pseudogene KNOWN OTTHUMG00000158099.1 334 334 1 ENSG00000235990.2 RP11-553N16.5 chr1 241916123 241916543 + processed_pseudogene KNOWN OTTHUMG00000040031.3 421 421 1 ENSG00000270475.1 CTC-451A6.5 chr19 22708834 22709314 - processed_pseudogene KNOWN OTTHUMG00000184954.1 481 481 1 ENSG00000268789.1 VN1R87P chr19 22742924 22743410 - unprocessed_pseudogene KNOWN OTTHUMG00000182990.1 487 487 1 ENSG00000213973.7 ZNF99 chr19 22752183 22784107 - protein_coding KNOWN OTTHUMG00000182992.2 31925 7883 12 ENSG00000279966.1 AC008626.1 chr19 22770364 22770622 + pseudogene NOVEL NA 259 258 2 ENSG00000269509.1 BNIP3P34 chr19 22773853 22774424 + processed_pseudogene KNOWN OTTHUMG00000183119.1 572 572 1 ENSG00000268696.1 ZNF723P chr19 22832201 22859422 + unprocessed_pseudogene KNOWN OTTHUMG00000183120.1 27222 2400 5 ENSG00000271655.1 BNIP3P35 chr19 22840432 22840921 - processed_pseudogene KNOWN OTTHUMG00000184955.1 490 490 1 ENSG00000268541.1 VN1R88P chr19 22861303 22861594 + unprocessed_pseudogene KNOWN OTTHUMG00000183121.1 292 292 1 ENSG00000268296.1 CTD-2579N5.3 chr19 22907086 22914289 - lincRNA NOVEL OTTHUMG00000183122.1 7204 383 3 ENSG00000269458.1 CTD-2579N5.4 chr19 22925377 22925547 + unprocessed_pseudogene KNOWN OTTHUMG00000183123.1 171 171 1 ENSG00000196289.6 BECN1P1 chr1 241957737 241959057 + processed_pseudogene KNOWN OTTHUMG00000039863.1 1321 1321 1 ENSG00000269067.1 ZNF728 chr19 22975468 23003176 - protein_coding KNOWN OTTHUMG00000183124.1 27709 2192 7 ENSG00000271661.1 BNIP3P36 chr19 22994968 22995847 + processed_pseudogene KNOWN OTTHUMG00000184956.1 880 574 2 ENSG00000261558.1 CTD-2291D10.2 chr19 23015075 23023697 - lincRNA NOVEL OTTHUMG00000175742.1 8623 1024 4 ENSG00000261615.5 CTD-2291D10.1 chr19 23046958 23061752 - lincRNA NOVEL OTTHUMG00000175741.2 14795 2119 11 ENSG00000269543.4 CTD-2291D10.3 chr19 23068473 23071476 - lincRNA NOVEL OTTHUMG00000183225.1 3004 630 7 ENSG00000267886.1 CTD-2291D10.4 chr19 23075201 23100361 + lincRNA NOVEL OTTHUMG00000183226.1 25161 967 7 ENSG00000183850.12 ZNF730 chr19 23075210 23147219 + protein_coding KNOWN OTTHUMG00000183227.2 72010 3291 10 ENSG00000270479.1 BNIP3P37 chr19 23123188 23124088 - processed_pseudogene KNOWN OTTHUMG00000184957.1 901 901 1 ENSG00000268105.1 RP11-369G6.2 chr19 23125665 23128543 + processed_pseudogene KNOWN OTTHUMG00000183228.1 2879 896 2 ENSG00000267920.1 SNX6P1 chr19 23126569 23127792 - processed_pseudogene KNOWN OTTHUMG00000183229.1 1224 1224 1 ENSG00000213026.4 CFL1P4 chr1 241993185 241993682 + processed_pseudogene KNOWN OTTHUMG00000039864.2 498 498 1 ENSG00000269471.1 RP11-15H20.2 chr19 23204010 23204556 + processed_pseudogene KNOWN OTTHUMG00000183230.1 547 547 1 ENSG00000196081.8 ZNF724P chr19 23221599 23250390 - protein_coding KNOWN OTTHUMG00000183231.1 28792 3322 12 ENSG00000268469.1 BNIP3P38 chr19 23236308 23236851 + processed_pseudogene KNOWN OTTHUMG00000183232.1 544 544 1 ENSG00000269837.1 IPO5P1 chr19 23255053 23257939 - transcribed_processed_pseudogene KNOWN OTTHUMG00000183233.1 2887 2887 2 ENSG00000269107.1 RP11-15H20.7 chr19 23257255 23274232 - lincRNA NOVEL OTTHUMG00000183234.1 16978 574 3 ENSG00000213971.6 RP11-15H20.6 chr19 23259906 23274251 - processed_transcript NOVEL OTTHUMG00000183235.2 14346 5091 34 ENSG00000268794.1 VN1R90P chr19 23288620 23289345 + unprocessed_pseudogene KNOWN OTTHUMG00000183236.1 726 726 1 ENSG00000268148.1 VN1R91P chr19 23290849 23291017 + unprocessed_pseudogene KNOWN OTTHUMG00000183237.1 169 169 1 ENSG00000167232.12 ZNF91 chr19 23304991 23395560 - protein_coding KNOWN OTTHUMG00000183268.1 90570 10397 35 ENSG00000267934.1 CTB-176F20.3 chr19 23323968 23329101 + antisense NOVEL OTTHUMG00000183269.1 5134 5134 1 ENSG00000197769.5 MAP1LC3C chr1 241995490 241999073 - protein_coding KNOWN OTTHUMG00000039865.1 3584 1182 4 ENSG00000269431.1 BNIP3P8 chr19 23380317 23380876 + processed_pseudogene KNOWN OTTHUMG00000183270.1 560 560 1 ENSG00000268992.1 CDC42EP3P1 chr19 23384530 23385293 + processed_pseudogene KNOWN OTTHUMG00000183271.1 764 764 1 ENSG00000269416.4 LINC01224 chr19 23399233 23416075 - lincRNA NOVEL OTTHUMG00000183272.1 16843 3296 40 ENSG00000268908.1 VN1R92P chr19 23444262 23445189 + unprocessed_pseudogene KNOWN OTTHUMG00000183273.1 928 928 1 ENSG00000275201.1 LLNLF-18A12.1 chr19 23479762 23480468 - unprocessed_pseudogene KNOWN OTTHUMG00000187991.1 707 208 2 ENSG00000268100.1 ZNF725P chr19 23492428 23512656 - unprocessed_pseudogene KNOWN OTTHUMG00000183274.1 20229 1632 4 ENSG00000197372.8 ZNF675 chr19 23525631 23687220 - protein_coding KNOWN OTTHUMG00000183384.1 161590 6785 34 ENSG00000268455.1 RP11-359H18.2 chr19 23596122 23598159 + unprocessed_pseudogene KNOWN OTTHUMG00000183385.1 2038 1595 2 ENSG00000240231.1 RPS27P29 chr19 23597341 23597592 + processed_pseudogene KNOWN OTTHUMG00000158101.1 252 252 1 ENSG00000269320.1 VN1R93P chr19 23602567 23603106 + unprocessed_pseudogene KNOWN OTTHUMG00000183386.1 540 540 1 ENSG00000223119.1 RNU6-1139P chr1 242023949 242024054 - snRNA KNOWN NA 106 106 1 ENSG00000196172.9 ZNF681 chr19 23739195 23758891 - protein_coding KNOWN OTTHUMG00000150831.3 19697 6497 10 ENSG00000233836.6 RP11-255H23.2 chr19 23762944 23833314 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000158123.3 70371 2122 10 ENSG00000205246.7 RPSAP58 chr19 23763005 23828135 + protein_coding KNOWN OTTHUMG00000158122.2 65131 2636 13 ENSG00000269662.1 BNIP3P39 chr19 23798924 23799477 - processed_pseudogene KNOWN OTTHUMG00000183387.1 554 554 1 ENSG00000267924.1 RP11-255H23.4 chr19 23817599 23874701 - lincRNA NOVEL OTTHUMG00000183388.2 57103 2291 4 ENSG00000277493.1 RP11-255H23.5 chr19 23842549 23843230 + unprocessed_pseudogene KNOWN OTTHUMG00000187994.1 682 175 2 ENSG00000213967.9 ZNF726 chr19 23914876 23945159 + protein_coding KNOWN OTTHUMG00000167681.5 30284 6289 27 ENSG00000269289.4 CTB-92J24.3 chr19 23919081 23957930 - antisense NOVEL OTTHUMG00000183389.1 38850 2233 6 ENSG00000269397.1 CTB-92J24.2 chr19 23927788 23929287 + sense_intronic NOVEL OTTHUMG00000183390.1 1500 1500 1 ENSG00000269421.1 ZNF92P3 chr19 23935220 23936173 + unprocessed_pseudogene KNOWN OTTHUMG00000183391.1 954 954 1 ENSG00000224625.2 TUBB8P6 chr1 242057085 242060242 + unprocessed_pseudogene KNOWN OTTHUMG00000039866.2 3158 1288 4 ENSG00000201966.1 RNA5-8SP4 chr19 24004358 24004507 - rRNA KNOWN NA 150 150 1 ENSG00000213096.8 ZNF254 chr19 24033405 24129961 + protein_coding KNOWN OTTHUMG00000183394.1 96557 7602 33 ENSG00000268362.4 CTD-2017D11.1 chr19 24033445 24066909 + lincRNA NOVEL OTTHUMG00000183392.1 33465 2191 11 ENSG00000279425.1 CTD-2017D11.2 chr19 24078481 24080669 + TEC KNOWN OTTHUMG00000183393.1 2189 2189 1 ENSG00000268058.1 BNIP3P40 chr19 24098425 24098980 - processed_pseudogene KNOWN OTTHUMG00000183395.1 556 556 1 ENSG00000276030.1 CTD-2027I19.3 chr19 24146701 24147081 + lincRNA NOVEL OTTHUMG00000186705.1 381 381 1 ENSG00000268442.1 CTD-2027I19.2 chr19 24162370 24163425 - processed_pseudogene KNOWN OTTHUMG00000183396.1 1056 1056 1 ENSG00000267696.5 CTB-151G24.1 chr19 27638483 27646483 - lincRNA NOVEL OTTHUMG00000180737.2 8001 595 6 ENSG00000279882.1 CTB-151G24.2 chr19 27639300 27639665 - TEC KNOWN OTTHUMG00000183551.1 366 366 1 ENSG00000261824.5 LINC00662 chr19 27684580 27793940 - lincRNA NOVEL OTTHUMG00000175754.2 109361 7958 24 ENSG00000277099.1 RP11-323D18.5 chr1 242060490 242062595 - unprocessed_pseudogene KNOWN OTTHUMG00000187553.1 2106 822 6 ENSG00000261770.1 CTC-459F4.1 chr19 27757184 27760849 - lincRNA NOVEL OTTHUMG00000175751.2 3666 3666 1 ENSG00000267575.5 CTC-459F4.3 chr19 27793463 27918863 + lincRNA NOVEL OTTHUMG00000185849.2 125401 5141 30 ENSG00000272635.1 LLNLF-65H9.1 chr19 27793488 27984984 + processed_transcript NOVEL OTTHUMG00000180738.2 191497 924 6 ENSG00000281468.1 CTC-459F4.9 chr19 27802838 27803472 + sense_intronic NOVEL OTTHUMG00000189755.1 635 635 1 ENSG00000267264.1 CTC-459F4.6 chr19 27803538 27804060 + processed_pseudogene KNOWN OTTHUMG00000180739.1 523 523 1 ENSG00000267323.1 SLC25A1P5 chr19 27805423 27806205 - processed_pseudogene KNOWN OTTHUMG00000180740.1 783 783 1 ENSG00000267389.1 CTC-459F4.7 chr19 27812807 27896715 - processed_pseudogene KNOWN OTTHUMG00000180769.1 83909 819 8 ENSG00000266977.1 CTC-459F4.5 chr19 27849730 27889222 - lincRNA NOVEL OTTHUMG00000180741.1 39493 458 2 ENSG00000267623.3 AC022153.1 chr19 27902595 27984743 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000180772.4 82149 1569 12 ENSG00000267768.1 CTC-459F4.8 chr19 27908356 27908554 - processed_pseudogene KNOWN OTTHUMG00000180770.1 199 199 1 ENSG00000180287.15 PLD5 chr1 242082986 242524696 - protein_coding KNOWN OTTHUMG00000039867.3 441711 9545 63 ENSG00000267630.1 AC005758.1 chr19 27918943 27929370 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000180771.2 10428 625 5 ENSG00000266906.1 AC005357.1 chr19 27983032 27983332 - processed_pseudogene KNOWN OTTHUMG00000180773.1 301 301 1 ENSG00000267509.4 CTD-2043I16.1 chr19 28065267 28125430 + lincRNA NOVEL OTTHUMG00000180780.1 60164 576 8 ENSG00000266928.1 CTB-70G10.1 chr19 28294093 28313500 - lincRNA NOVEL OTTHUMG00000180781.1 19408 575 3 ENSG00000267320.4 AC005780.1 chr19 28316705 28386204 - lincRNA NOVEL OTTHUMG00000180782.1 69500 1155 15 ENSG00000267238.1 AC093074.1 chr19 28394851 28396428 - lincRNA NOVEL OTTHUMG00000180783.1 1578 556 2 ENSG00000260725.1 AC005307.1 chr19 28418483 28429490 - lincRNA NOVEL OTTHUMG00000175757.1 11008 1570 2 ENSG00000267243.4 AC005307.3 chr19 28435388 28727777 - lincRNA NOVEL OTTHUMG00000180802.1 292390 3999 32 ENSG00000266893.1 AC005616.1 chr19 28491864 28632728 - lincRNA NOVEL OTTHUMG00000180803.1 140865 1269 2 ENSG00000267423.1 AC005616.2 chr19 28509238 28518728 + lincRNA NOVEL OTTHUMG00000180804.1 9491 579 2 ENSG00000224956.5 RP11-206L10.1 chr1 726231 728147 - unprocessed_pseudogene KNOWN OTTHUMG00000002405.1 1917 1236 2 ENSG00000224321.1 RP11-169K16.6 chr1 15792796 15793285 + processed_pseudogene KNOWN OTTHUMG00000003108.2 490 490 1 ENSG00000222120.1 RNA5SP81 chr1 242134272 242134381 + rRNA KNOWN NA 110 110 1 ENSG00000267537.1 AC005394.1 chr19 28602379 28648303 - lincRNA NOVEL OTTHUMG00000180805.1 45925 185 2 ENSG00000266976.1 AC079466.1 chr19 28606688 28615229 + lincRNA NOVEL OTTHUMG00000180814.1 8542 4453 4 ENSG00000267799.1 MAN1A2P1 chr19 28790812 28792871 - processed_pseudogene KNOWN OTTHUMG00000181945.1 2060 1400 2 ENSG00000267617.1 AC007795.1 chr19 28869796 28879170 + lincRNA NOVEL OTTHUMG00000181981.1 9375 437 3 ENSG00000267528.1 AC011524.1 chr19 28883430 28953245 + lincRNA NOVEL OTTHUMG00000181982.1 69816 537 3 ENSG00000267683.1 AC008991.1 chr19 28892931 28895949 + lincRNA NOVEL OTTHUMG00000181983.1 3019 487 2 ENSG00000267027.1 AC011524.2 chr19 28949437 28950200 - lincRNA NOVEL OTTHUMG00000181984.1 764 240 2 ENSG00000267240.1 AC011524.3 chr19 28960506 28964943 - lincRNA NOVEL OTTHUMG00000181985.1 4438 399 3 ENSG00000267339.4 LINC00906 chr19 28965131 28970874 + lincRNA NOVEL OTTHUMG00000181995.1 5744 4183 16 ENSG00000252272.1 RNA5SP470 chr19 29001670 29001775 + rRNA KNOWN NA 106 106 1 ENSG00000272865.1 RP11-561I11.4 chr1 242147514 242209129 + antisense NOVEL OTTHUMG00000186269.1 61616 475 5 ENSG00000267014.4 LINC01532 chr19 29002555 29013955 + lincRNA NOVEL OTTHUMG00000181996.1 11401 2019 13 ENSG00000169021.5 UQCRFS1 chr19 29205321 29213541 - protein_coding KNOWN OTTHUMG00000181997.2 8221 3475 2 ENSG00000267498.1 CTB-32O4.2 chr19 29213235 29215815 + lincRNA NOVEL OTTHUMG00000181998.1 2581 817 5 ENSG00000276251.1 CTB-32O4.3 chr19 29220864 29221666 + lincRNA NOVEL OTTHUMG00000186711.1 803 803 1 ENSG00000276631.1 CTB-32O4.4 chr19 29222542 29223137 + lincRNA NOVEL OTTHUMG00000186712.1 596 596 1 ENSG00000241604.3 RN7SL340P chr19 29233090 29233385 - misc_RNA KNOWN NA 296 296 1 ENSG00000264515.4 CTC-525D6.1 chr19 29287011 29525752 - processed_transcript NOVEL OTTHUMG00000178958.1 238742 3126 13 ENSG00000267574.1 CTC-525D6.5 chr19 29448038 29448380 + lincRNA NOVEL OTTHUMG00000182000.1 343 250 2 ENSG00000266248.1 CTC-525D6.2 chr19 29489775 29526948 - antisense NOVEL OTTHUMG00000178959.1 37174 543 2 ENSG00000279387.1 CTC-525D6.3 chr19 29506966 29509041 - TEC KNOWN OTTHUMG00000182001.1 2076 2076 1 ENSG00000252084.1 RN7SKP12 chr1 242188647 242188789 - misc_RNA KNOWN NA 143 143 1 ENSG00000187135.7 VSTM2B chr19 29526499 29564479 + protein_coding KNOWN OTTHUMG00000182002.1 37981 1488 5 ENSG00000105171.8 POP4 chr19 29604017 29617237 + protein_coding KNOWN OTTHUMG00000182020.2 13221 6574 67 ENSG00000166289.5 PLEKHF1 chr19 29665056 29675457 + protein_coding KNOWN OTTHUMG00000182097.1 10402 2681 8 ENSG00000131943.16 C19orf12 chr19 29698886 29715789 - protein_coding KNOWN OTTHUMG00000149838.5 16904 5378 25 ENSG00000105173.12 CCNE1 chr19 29811898 29824308 + protein_coding KNOWN OTTHUMG00000177626.2 12411 2550 52 ENSG00000274103.1 AC008798.1 chr19 29846709 29846801 + miRNA NOVEL NA 93 93 1 ENSG00000267433.1 CTD-2057D4.2 chr19 29901696 29901869 - processed_pseudogene KNOWN OTTHUMG00000182100.1 174 174 1 ENSG00000278895.1 CTC-448F2.7 chr19 29915862 29917830 + TEC KNOWN OTTHUMG00000182102.1 1969 1969 1 ENSG00000267258.1 CTC-448F2.3 chr19 29921182 29921653 + processed_pseudogene KNOWN OTTHUMG00000182101.1 472 472 1 ENSG00000105176.16 URI1 chr19 29923644 30016608 + protein_coding KNOWN OTTHUMG00000177923.4 92965 5432 77 ENSG00000224525.2 RP11-561I11.3 chr1 242203555 242210827 + antisense NOVEL OTTHUMG00000039869.3 7273 766 3 ENSG00000242100.2 RPL9P32 chr19 29956369 29956988 - processed_pseudogene KNOWN OTTHUMG00000158141.2 620 620 1 ENSG00000267006.1 CTC-448F2.4 chr19 30028741 30029916 - lincRNA NOVEL OTTHUMG00000182103.1 1176 1176 1 ENSG00000267692.1 TAF9P3 chr19 30037285 30037411 + processed_pseudogene KNOWN OTTHUMG00000182104.1 127 127 1 ENSG00000266910.1 CTC-448F2.6 chr19 30037423 30038156 + processed_pseudogene KNOWN OTTHUMG00000182105.1 734 734 1 ENSG00000267223.1 AC005597.1 chr19 30219666 30228715 - antisense NOVEL OTTHUMG00000182111.1 9050 420 2 ENSG00000198597.7 ZNF536 chr19 30228290 30713538 + protein_coding KNOWN OTTHUMG00000182112.6 485249 8631 20 ENSG00000280061.1 CTD-2001J20.1 chr19 30553956 30558058 + TEC KNOWN OTTHUMG00000182315.1 4103 4103 1 ENSG00000267760.1 CTC-565M22.1 chr19 30665274 30668647 - lincRNA NOVEL OTTHUMG00000182316.1 3374 554 2 ENSG00000267081.1 CTC-400I9.2 chr19 30850975 30872507 + lincRNA NOVEL OTTHUMG00000182317.1 21533 567 2 ENSG00000261316.1 CTC-400I9.1 chr19 30907199 30909155 + lincRNA NOVEL OTTHUMG00000175758.1 1957 385 2 ENSG00000226750.1 RP11-513D4.3 chr1 242345558 242345718 + unprocessed_pseudogene KNOWN OTTHUMG00000057835.1 161 161 1 ENSG00000267378.1 CTC-400I9.3 chr19 30946582 30957192 + lincRNA NOVEL OTTHUMG00000182318.1 10611 561 2 ENSG00000267777.1 CTC-439O9.3 chr19 31167516 31207663 + lincRNA NOVEL OTTHUMG00000182320.1 40148 677 5 ENSG00000121297.6 TSHZ3 chr19 31274945 31349547 - protein_coding KNOWN OTTHUMG00000150184.3 74603 5817 6 ENSG00000267662.1 AC007796.1 chr19 31348881 31417794 + antisense NOVEL OTTHUMG00000182322.1 68914 560 4 ENSG00000278875.1 CTC-439O9.1 chr19 31364297 31366098 + TEC KNOWN OTTHUMG00000175760.1 1802 1802 1 ENSG00000267636.1 AC008992.1 chr19 31421997 31427302 + lincRNA NOVEL OTTHUMG00000180516.1 5306 446 2 ENSG00000267599.1 CTD-2050I18.2 chr19 31465653 31466431 + lincRNA NOVEL OTTHUMG00000180517.1 779 293 2 ENSG00000267407.1 CTD-2050I18.1 chr19 31542039 31554797 + lincRNA NOVEL OTTHUMG00000180229.1 12759 560 3 ENSG00000261400.1 AC011525.2 chr19 31588040 31595720 - lincRNA NOVEL OTTHUMG00000175764.3 7681 5676 2 ENSG00000267465.5 AC011525.4 chr19 31588196 31593781 + lincRNA NOVEL OTTHUMG00000180518.3 5586 1778 9 ENSG00000235467.1 RPL10AP5 chr1 242365189 242365822 + processed_pseudogene KNOWN OTTHUMG00000039858.1 634 634 1 ENSG00000252780.1 RNA5SP471 chr19 31655356 31655461 - rRNA KNOWN NA 106 106 1 ENSG00000201894.1 RNU6-967P chr19 31787148 31787255 - snRNA KNOWN NA 108 108 1 ENSG00000267012.1 CTC-360P9.1 chr19 31886704 31908284 - lincRNA NOVEL OTTHUMG00000180231.1 21581 536 3 ENSG00000267094.1 CTC-360P9.5 chr19 31922884 31945398 - lincRNA NOVEL OTTHUMG00000180563.1 22515 570 7 ENSG00000221504.1 AC011456.1 chr19 31926573 31926688 + miRNA NOVEL NA 116 116 1 ENSG00000267684.1 CTC-360P9.2 chr19 31965642 31966969 - lincRNA NOVEL OTTHUMG00000180232.1 1328 549 2 ENSG00000267489.2 CTC-360P9.4 chr19 31967099 32025791 - lincRNA NOVEL OTTHUMG00000180233.2 58693 1027 6 ENSG00000267779.4 LINC01533 chr19 32025862 32056865 + lincRNA NOVEL OTTHUMG00000180234.1 31004 1853 16 ENSG00000267204.1 AC011518.1 chr19 32102088 32105916 - lincRNA NOVEL OTTHUMG00000180236.1 3829 2908 4 ENSG00000267133.1 AC011518.2 chr19 32103583 32106537 + lincRNA NOVEL OTTHUMG00000180237.1 2955 863 6 ENSG00000213690.3 RP11-513D4.1 chr1 242376923 242377432 - processed_pseudogene KNOWN OTTHUMG00000039857.2 510 510 1 ENSG00000200738.1 RNA5SP472 chr19 32243965 32244083 - rRNA KNOWN NA 119 119 1 ENSG00000168813.15 ZNF507 chr19 32345594 32387667 + protein_coding KNOWN OTTHUMG00000180220.5 42074 11239 27 ENSG00000263960.1 AC007773.1 chr19 32377282 32377367 - miRNA NOVEL NA 86 86 1 ENSG00000267213.4 AC007773.2 chr19 32390050 32405560 - antisense NOVEL OTTHUMG00000180221.2 15511 972 3 ENSG00000178904.17 DPY19L3 chr19 32405543 32485895 + protein_coding KNOWN OTTHUMG00000180222.7 80353 10781 116 ENSG00000263780.1 AC005621.1 chr19 32500856 32500941 - miRNA NOVEL NA 86 86 1 ENSG00000105185.10 PDCD5 chr19 32581068 32587452 + protein_coding KNOWN OTTHUMG00000180224.6 6385 2253 36 ENSG00000105186.13 ANKRD27 chr19 32597007 32676597 - protein_coding KNOWN OTTHUMG00000180225.8 79591 7855 92 ENSG00000201388.1 SNORA68 chr19 32608337 32608469 - snoRNA NOVEL NA 133 133 1 ENSG00000242325.1 RPS12P31 chr19 32636078 32636475 + processed_pseudogene KNOWN OTTHUMG00000158146.1 398 398 1 ENSG00000270859.1 RP11-435I3.1 chr1 242671140 242671576 + processed_pseudogene KNOWN OTTHUMG00000184484.1 437 437 1 ENSG00000242436.3 RN7SL789P chr19 32655016 32655308 - misc_RNA KNOWN NA 293 293 1 ENSG00000267557.1 CTC-379B2.4 chr19 32666298 32673210 + antisense NOVEL OTTHUMG00000180226.1 6913 573 2 ENSG00000186326.3 RGS9BP chr19 32675407 32678300 + protein_coding KNOWN OTTHUMG00000180227.1 2894 2894 1 ENSG00000267475.1 CTD-2538C1.2 chr19 32687089 32691750 - lincRNA NOVEL OTTHUMG00000180421.1 4662 568 2 ENSG00000213965.3 NUDT19 chr19 32691961 32713796 + protein_coding KNOWN OTTHUMG00000180228.3 21836 2967 3 ENSG00000267567.1 CTD-2538C1.3 chr19 32718298 32719595 - lincRNA NOVEL OTTHUMG00000180422.1 1298 516 2 ENSG00000173809.14 TDRD12 chr19 32719753 32829580 + protein_coding KNOWN OTTHUMG00000177230.4 109828 7011 48 ENSG00000267245.1 CTD-2085J24.5 chr19 32824142 32824505 - processed_pseudogene KNOWN OTTHUMG00000182113.1 364 364 1 ENSG00000021488.11 SLC7A9 chr19 32830509 32869766 - protein_coding KNOWN OTTHUMG00000180287.3 39258 2597 62 ENSG00000267555.1 CTD-2085J24.3 chr19 32831295 32833168 + antisense NOVEL OTTHUMG00000180288.1 1874 435 2 ENSG00000215800.2 RSL24D1P4 chr1 242772620 242773103 + processed_pseudogene KNOWN OTTHUMG00000039856.1 484 484 1 ENSG00000201967.1 RN7SKP22 chr19 32862800 32863092 - misc_RNA KNOWN NA 293 293 1 ENSG00000121289.16 CEP89 chr19 32875925 32971991 - protein_coding KNOWN OTTHUMG00000180424.6 96067 9233 78 ENSG00000239988.1 RPL31P60 chr19 32963499 32963865 + processed_pseudogene KNOWN OTTHUMG00000182178.1 367 367 1 ENSG00000131944.8 C19orf40 chr19 32972209 32978222 + protein_coding KNOWN OTTHUMG00000180339.3 6014 2370 24 ENSG00000131941.6 RHPN2 chr19 32978593 33064888 - protein_coding KNOWN OTTHUMG00000180340.2 86296 4804 50 ENSG00000267611.1 CTC-461H2.2 chr19 33051515 33051701 + processed_pseudogene KNOWN OTTHUMG00000182115.1 187 187 1 ENSG00000267725.1 CTC-461H2.3 chr19 33067175 33067433 + processed_pseudogene KNOWN OTTHUMG00000182179.1 259 259 1 ENSG00000076650.5 GPATCH1 chr19 33080880 33130542 + protein_coding KNOWN OTTHUMG00000180341.4 49663 4488 40 ENSG00000281685.1 AC008521.1 chr19 33090303 33090416 - miRNA NOVEL NA 114 114 1 ENSG00000166359.9 WDR88 chr19 33132090 33175795 + protein_coding KNOWN OTTHUMG00000180342.3 43706 1841 29 ENSG00000270818.1 RP11-498M14.1 chr1 242882066 242883475 - processed_pseudogene KNOWN OTTHUMG00000184485.1 1410 1410 1 ENSG00000130881.12 LRP3 chr19 33177603 33208867 + protein_coding KNOWN OTTHUMG00000180343.7 31265 5095 18 ENSG00000267054.1 CTD-2540B15.10 chr19 33178056 33178651 + sense_intronic NOVEL OTTHUMG00000180546.1 596 375 2 ENSG00000273420.1 CTD-2540B15.13 chr19 33207129 33207639 + 3prime_overlapping_ncrna NOVEL OTTHUMG00000186174.1 511 511 1 ENSG00000130876.10 SLC7A10 chr19 33208664 33225850 - protein_coding KNOWN OTTHUMG00000180344.3 17187 3111 34 ENSG00000267714.1 CTD-2540B15.6 chr19 33217817 33221170 + antisense NOVEL OTTHUMG00000180345.1 3354 700 4 ENSG00000270212.1 CTD-2540B15.12 chr19 33283978 33285739 - lincRNA NOVEL OTTHUMG00000184169.1 1762 569 2 ENSG00000267580.1 CTD-2540B15.11 chr19 33299934 33301168 + antisense NOVEL OTTHUMG00000180346.1 1235 659 2 ENSG00000245848.2 CEBPA chr19 33299934 33302564 - protein_coding KNOWN OTTHUMG00000161461.1 2631 2631 1 ENSG00000267727.1 CTD-2540B15.7 chr19 33301279 33301940 + antisense NOVEL OTTHUMG00000180733.1 662 482 2 ENSG00000267296.2 CEBPA-AS1 chr19 33302857 33305054 + antisense KNOWN OTTHUMG00000180429.2 2198 2198 1 ENSG00000233954.6 UQCRHL chr1 15807169 15809348 - protein_coding KNOWN OTTHUMG00000003109.3 2180 2180 1 ENSG00000277704.1 RP11-498M14.2 chr1 242890247 242890803 + processed_pseudogene KNOWN OTTHUMG00000187556.1 557 557 1 ENSG00000267130.1 CTD-2540B15.9 chr19 33305036 33309387 + lincRNA NOVEL OTTHUMG00000180430.1 4352 404 2 ENSG00000243864.1 RPS3AP50 chr19 33340686 33341984 + processed_pseudogene KNOWN OTTHUMG00000158153.2 1299 803 2 ENSG00000266899.1 AKR1B1P7 chr19 33360500 33361448 - processed_pseudogene KNOWN OTTHUMG00000182176.1 949 949 1 ENSG00000153879.7 CEBPG chr19 33373330 33382686 + protein_coding KNOWN OTTHUMG00000180469.2 9357 4411 4 ENSG00000124299.12 PEPD chr19 33386950 33521794 - protein_coding KNOWN OTTHUMG00000180470.10 134845 4157 101 ENSG00000266985.1 CTD-2329C7.2 chr19 33555568 33557470 + lincRNA NOVEL OTTHUMG00000180471.1 1903 1389 2 ENSG00000232429.3 RPL21P131 chr19 33589206 33589688 - processed_pseudogene KNOWN OTTHUMG00000158155.1 483 483 1 ENSG00000124302.11 CHST8 chr19 33621955 33773509 + protein_coding KNOWN OTTHUMG00000180472.5 151555 3052 21 ENSG00000153885.13 KCTD15 chr19 33795933 33815763 + protein_coding KNOWN OTTHUMG00000180475.4 19831 6388 61 ENSG00000277013.1 CTC-526N19.1 chr19 33906352 33908391 + lincRNA NOVEL OTTHUMG00000175767.1 2040 2040 1 ENSG00000230199.1 RP11-331N16.1 chr1 242975005 242975084 + processed_pseudogene KNOWN OTTHUMG00000057837.1 80 80 1 ENSG00000240626.3 RN7SL150P chr19 33927364 33927625 - misc_RNA KNOWN NA 262 262 1 ENSG00000239253.1 RPS4XP23 chr19 34021659 34021895 + processed_pseudogene KNOWN OTTHUMG00000158173.1 237 237 1 ENSG00000249987.1 RPS4XP20 chr19 34022656 34023427 - processed_pseudogene KNOWN OTTHUMG00000184237.1 772 772 1 ENSG00000186008.7 RPS4XP21 chr19 34092561 34093310 - processed_pseudogene KNOWN OTTHUMG00000158165.2 750 750 1 ENSG00000270849.1 CHCHD2P3 chr19 34126973 34127423 + processed_pseudogene KNOWN OTTHUMG00000184270.2 451 451 1 ENSG00000257103.7 LSM14A chr19 34172504 34229515 + protein_coding KNOWN OTTHUMG00000180491.6 57012 4748 54 ENSG00000166398.11 KIAA0355 chr19 34254537 34355586 + protein_coding KNOWN OTTHUMG00000180505.5 101050 7459 34 ENSG00000257074.3 RPL29P33 chr19 34296277 34296592 - processed_pseudogene KNOWN OTTHUMG00000158175.2 316 316 1 ENSG00000267219.1 AC010504.2 chr19 34348356 34359412 - antisense NOVEL OTTHUMG00000180506.1 11057 585 3 ENSG00000105220.13 GPI chr19 34359480 34402156 + protein_coding KNOWN OTTHUMG00000182087.6 42677 9112 135 ENSG00000234116.1 RP11-261C10.1 chr1 243005845 243007468 - lincRNA NOVEL OTTHUMG00000039859.1 1624 792 3 ENSG00000266953.5 RP11-618P17.4 chr19 34396315 34409364 + protein_coding PUTATIVE OTTHUMG00000182250.2 13050 974 9 ENSG00000126249.6 PDCD2L chr19 34404384 34426168 + protein_coding KNOWN OTTHUMG00000182089.3 21785 1431 21 ENSG00000264317.2 RN7SL154P chr19 34421988 34422311 - misc_RNA KNOWN NA 324 324 1 ENSG00000267024.1 CTD-2588C8.8 chr19 34426112 34428273 - antisense NOVEL OTTHUMG00000182117.1 2162 442 2 ENSG00000126261.11 UBA2 chr19 34428352 34471251 + protein_coding KNOWN OTTHUMG00000182090.6 42900 4815 80 ENSG00000142279.11 WTIP chr19 34481638 34512304 + protein_coding KNOWN OTTHUMG00000182099.4 30667 13733 16 ENSG00000239210.2 RPS26P55 chr19 34533427 34534084 - processed_pseudogene KNOWN OTTHUMG00000185799.1 658 356 2 ENSG00000248830.1 ZNF807 chr19 34542462 34545395 - unprocessed_pseudogene KNOWN OTTHUMG00000158178.2 2934 1707 3 ENSG00000268751.1 SCGB1B2P chr19 34576733 34577701 - lincRNA NOVEL OTTHUMG00000182921.1 969 616 5 ENSG00000205209.6 SCGB2B2 chr19 34593329 34675699 - protein_coding KNOWN OTTHUMG00000182463.2 82371 2990 11 ENSG00000231512.4 LINC01347 chr1 243029512 243052252 - lincRNA NOVEL OTTHUMG00000039860.1 22741 1460 10 ENSG00000271049.1 CTD-2553L13.7 chr19 34634844 34635717 + processed_pseudogene KNOWN OTTHUMG00000184584.1 874 874 1 ENSG00000252230.1 SNORD111 chr19 34637696 34637781 - snoRNA NOVEL NA 86 86 1 ENSG00000268683.1 CTD-2553L13.4 chr19 34638122 34640689 - sense_intronic NOVEL OTTHUMG00000182923.1 2568 413 2 ENSG00000279971.1 CTD-2553L13.5 chr19 34645380 34646838 + TEC KNOWN OTTHUMG00000182924.1 1459 1459 1 ENSG00000269811.2 SCGB2B3P chr19 34645662 34646070 + processed_pseudogene KNOWN OTTHUMG00000184882.1 409 409 1 ENSG00000279329.1 CTD-2553L13.9 chr19 34675717 34677581 - TEC KNOWN OTTHUMG00000184883.2 1865 1865 1 ENSG00000089335.19 ZNF302 chr19 34677639 34686397 + protein_coding KNOWN OTTHUMG00000163329.6 8759 5032 70 ENSG00000274104.1 CTD-2553L13.10 chr19 34733298 34733837 - lincRNA NOVEL OTTHUMG00000186722.1 540 540 1 ENSG00000197841.13 ZNF181 chr19 34734155 34745378 + protein_coding KNOWN OTTHUMG00000157508.6 11224 6266 31 ENSG00000153896.16 ZNF599 chr19 34758076 34773229 - protein_coding KNOWN OTTHUMG00000182346.3 15154 6796 14 ENSG00000278455.1 RP11-261C10.8 chr1 243049782 243051619 + processed_pseudogene KNOWN OTTHUMG00000187558.1 1838 1838 1 ENSG00000270281.1 CTC-523E23.10 chr19 34779412 34780021 - processed_pseudogene KNOWN OTTHUMG00000185143.1 610 610 1 ENSG00000267767.2 CTC-523E23.4 chr19 34788582 34832869 - lincRNA NOVEL OTTHUMG00000182347.2 44288 2266 10 ENSG00000261754.2 CTC-523E23.1 chr19 34811589 34814345 - lincRNA NOVEL OTTHUMG00000175768.2 2757 2757 1 ENSG00000271666.1 CTC-523E23.9 chr19 34825414 34825996 + processed_pseudogene KNOWN OTTHUMG00000184606.1 583 583 1 ENSG00000269086.2 CTC-523E23.5 chr19 34837889 34855304 + lincRNA NOVEL OTTHUMG00000182958.2 17416 6828 11 ENSG00000271109.1 CTC-523E23.11 chr19 34849278 34860576 - lincRNA NOVEL OTTHUMG00000185144.1 11299 842 5 ENSG00000270624.1 LOC401913 chr19 34866352 34866919 + processed_pseudogene KNOWN OTTHUMG00000185147.1 568 568 1 ENSG00000271649.1 LINC00904 chr19 34892029 34898943 - lincRNA NOVEL OTTHUMG00000185148.1 6915 471 3 ENSG00000270544.1 CTC-523E23.14 chr19 34902202 34904195 - lincRNA NOVEL OTTHUMG00000185149.1 1994 442 3 ENSG00000271171.1 CTC-523E23.15 chr19 34904392 34905057 - lincRNA NOVEL OTTHUMG00000185150.1 666 458 2 ENSG00000253326.2 RP11-261C10.7 chr1 243054861 243056394 - processed_pseudogene KNOWN OTTHUMG00000183886.1 1534 1243 2 ENSG00000269037.1 CTC-523E23.6 chr19 34905315 34908188 + lincRNA NOVEL OTTHUMG00000182959.1 2874 1657 2 ENSG00000270876.1 ZNF30-AS1 chr19 34923299 34926812 - lincRNA NOVEL OTTHUMG00000184607.2 3514 625 2 ENSG00000168661.13 ZNF30 chr19 34926903 34945170 + protein_coding KNOWN OTTHUMG00000182960.3 18268 2745 27 ENSG00000280106.1 CTC-523E23.3 chr19 34949038 34951205 - TEC KNOWN OTTHUMG00000175770.1 2168 2168 1 ENSG00000180884.9 ZNF792 chr19 34956354 34964049 - protein_coding KNOWN OTTHUMG00000150339.2 7696 4234 6 ENSG00000089351.13 GRAMD1A chr19 34994784 35026471 + protein_coding KNOWN OTTHUMG00000182464.5 31688 5942 119 ENSG00000269303.1 CTD-2527I21.7 chr19 34998233 35000170 - antisense NOVEL OTTHUMG00000182471.1 1938 565 3 ENSG00000271032.1 CTD-2527I21.14 chr19 35014961 35025335 - antisense NOVEL OTTHUMG00000185158.1 10375 526 2 ENSG00000105711.9 SCN1B chr19 35030684 35040448 + protein_coding KNOWN OTTHUMG00000182472.2 9765 4625 21 ENSG00000267874.1 CTD-2527I21.9 chr19 35036334 35037060 + sense_intronic NOVEL OTTHUMG00000182473.1 727 405 2 ENSG00000214837.7 LINC01347 chr1 243056307 243101744 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000039861.5 45438 3841 22 ENSG00000105707.12 HPN chr19 35040506 35066571 + protein_coding KNOWN OTTHUMG00000182474.2 26066 3380 71 ENSG00000227392.1 HPN-AS1 chr19 35059059 35106304 - antisense NOVEL OTTHUMG00000182475.2 47246 1124 4 ENSG00000179066.7 CTD-2527I21.15 chr19 35105969 35107318 + lincRNA NOVEL OTTHUMG00000187103.1 1350 1350 2 ENSG00000089356.15 FXYD3 chr19 35115879 35124324 + protein_coding KNOWN OTTHUMG00000184625.2 8446 3334 99 ENSG00000278663.1 MIR6887 chr19 35122700 35122764 + miRNA KNOWN NA 65 65 1 ENSG00000153902.12 LGI4 chr19 35124513 35142451 - protein_coding KNOWN OTTHUMG00000044558.4 17939 4532 63 ENSG00000279619.1 CTD-2527I21.5 chr19 35137645 35139580 - TEC KNOWN OTTHUMG00000182358.1 1936 1936 1 ENSG00000266964.4 FXYD1 chr19 35138808 35143109 + protein_coding KNOWN OTTHUMG00000182359.2 4302 1926 74 ENSG00000221857.6 CTD-2527I21.4 chr19 35138824 35151336 + processed_transcript NOVEL OTTHUMG00000182360.1 12513 735 20 ENSG00000221946.6 FXYD7 chr19 35143250 35154301 + protein_coding KNOWN OTTHUMG00000182348.2 11052 1795 19 ENSG00000212230.1 RNU6-747P chr1 243081156 243081259 - snRNA KNOWN NA 104 104 1 ENSG00000089327.13 FXYD5 chr19 35154730 35169883 + protein_coding KNOWN OTTHUMG00000048092.2 15154 2993 96 ENSG00000177558.3 FAM187B chr19 35224800 35228729 - protein_coding KNOWN OTTHUMG00000164450.1 3930 1184 2 ENSG00000262497.1 FAM187B2P chr19 35232291 35233003 - unprocessed_pseudogene KNOWN OTTHUMG00000177833.1 713 713 1 ENSG00000105699.15 LSR chr19 35248330 35267964 + protein_coding KNOWN OTTHUMG00000183142.5 19635 2916 94 ENSG00000271366.1 AC002128.5 chr19 35251440 35253639 - antisense NOVEL OTTHUMG00000185225.1 2200 618 2 ENSG00000268947.1 AD000684.2 chr19 35262846 35264804 + sense_intronic NOVEL OTTHUMG00000183181.1 1959 1016 2 ENSG00000105698.14 USF2 chr19 35268978 35279821 + protein_coding KNOWN OTTHUMG00000183182.4 10844 4952 93 ENSG00000105697.6 HAMP chr19 35280716 35285143 + protein_coding KNOWN OTTHUMG00000183295.1 4428 3010 8 ENSG00000105695.13 MAG chr19 35292125 35313804 + protein_coding KNOWN OTTHUMG00000183296.1 21680 2957 54 ENSG00000012124.13 CD22 chr19 35319261 35347355 + protein_coding KNOWN OTTHUMG00000183298.3 28095 6159 194 ENSG00000143702.14 CEP170 chr1 243124428 243255348 - protein_coding KNOWN OTTHUMG00000039862.4 130921 10939 163 ENSG00000269553.1 U62631.5 chr19 35330843 35331920 + sense_intronic NOVEL OTTHUMG00000183299.1 1078 435 2 ENSG00000263397.1 MIR5196 chr19 35345513 35345627 + miRNA KNOWN NA 115 115 1 ENSG00000126266.3 FFAR1 chr19 35351552 35353862 + protein_coding KNOWN OTTHUMG00000188261.1 2311 2311 1 ENSG00000185897.6 FFAR3 chr19 35358460 35360485 + protein_coding KNOWN OTTHUMG00000172514.2 2026 1855 3 ENSG00000126251.6 GPR42 chr19 35370929 35372962 + protein_coding KNOWN OTTHUMG00000157124.3 2034 1863 3 ENSG00000268222.1 EEF1A1P7 chr19 35382172 35384052 + processed_pseudogene KNOWN OTTHUMG00000183302.1 1881 1394 2 ENSG00000205786.7 LINC01531 chr19 35399511 35419385 + lincRNA NOVEL OTTHUMG00000048095.4 19875 4107 36 ENSG00000264400.2 RN7SL491P chr19 35414881 35415149 - misc_RNA KNOWN NA 269 269 1 ENSG00000233214.1 AC002511.2 chr19 35424062 35424652 - lincRNA NOVEL OTTHUMG00000048096.2 591 450 2 ENSG00000232680.2 AC002511.3 chr19 35432957 35434642 - lincRNA NOVEL OTTHUMG00000048097.2 1686 1000 4 ENSG00000227230.1 RP11-261C10.5 chr1 243135898 243140588 + antisense NOVEL OTTHUMG00000039875.1 4691 694 2 ENSG00000126262.4 FFAR2 chr19 35443907 35451767 + protein_coding KNOWN OTTHUMG00000183303.3 7861 2149 5 ENSG00000188508.9 KRTDAP chr19 35487324 35495558 - protein_coding KNOWN OTTHUMG00000155449.2 8235 661 17 ENSG00000161249.19 DMKN chr19 35497220 35513658 - protein_coding KNOWN OTTHUMG00000048101.15 16439 7444 577 ENSG00000189001.9 SBSN chr19 35523367 35528351 - protein_coding KNOWN OTTHUMG00000048102.5 4985 1986 13 ENSG00000105679.7 GAPDHS chr19 35533412 35545316 + protein_coding KNOWN OTTHUMG00000182298.1 11905 1519 23 ENSG00000236144.5 TMEM147-AS1 chr19 35540738 35546029 - antisense NOVEL OTTHUMG00000048104.2 5292 4859 14 ENSG00000105677.10 TMEM147 chr19 35545595 35547526 + protein_coding KNOWN OTTHUMG00000048105.5 1932 1932 42 ENSG00000105675.7 ATP4A chr19 35550043 35563658 - protein_coding KNOWN OTTHUMG00000048106.5 13616 3889 40 ENSG00000278423.1 AC002389.1 chr19 35553831 35553895 - miRNA NOVEL NA 65 65 1 ENSG00000224910.1 AC002115.5 chr19 35597907 35601501 + lincRNA NOVEL OTTHUMG00000048109.1 3595 362 3 ENSG00000178715.8 RP11-169K16.8 chr1 15828232 15828669 + processed_pseudogene KNOWN OTTHUMG00000003169.2 438 438 1 ENSG00000232085.1 RP11-261C10.4 chr1 243164638 243169445 + antisense NOVEL OTTHUMG00000039874.1 4808 488 5 ENSG00000267626.1 AC002115.9 chr19 35608285 35612666 - lincRNA NOVEL OTTHUMG00000182062.1 4382 568 2 ENSG00000249115.7 HAUS5 chr19 35612744 35625349 + protein_coding KNOWN OTTHUMG00000048110.6 12606 5075 106 ENSG00000126254.10 RBM42 chr19 35629030 35637686 + protein_coding KNOWN OTTHUMG00000182063.2 8657 2206 53 ENSG00000105672.13 ETV2 chr19 35641745 35644871 + protein_coding KNOWN OTTHUMG00000150545.4 3127 2152 48 ENSG00000126267.7 COX6B1 chr19 35648223 35658861 + protein_coding KNOWN OTTHUMG00000048112.5 10639 936 14 ENSG00000105668.6 UPK1A chr19 35666516 35678483 + protein_coding KNOWN OTTHUMG00000048115.3 11968 1366 32 ENSG00000226510.1 UPK1A-AS1 chr19 35667948 35673291 - antisense NOVEL OTTHUMG00000048113.1 5344 795 2 ENSG00000267190.1 AC002314.4 chr19 35683778 35684201 - processed_pseudogene KNOWN OTTHUMG00000182260.1 424 424 1 ENSG00000011590.12 ZBTB32 chr19 35704527 35717038 + protein_coding KNOWN OTTHUMG00000048118.5 12512 2770 28 ENSG00000272333.4 KMT2B chr19 35718019 35738878 + protein_coding KNOWN OTTHUMG00000048119.8 20860 10279 54 ENSG00000054282.14 SDCCAG8 chr1 243256034 243500092 + protein_coding KNOWN OTTHUMG00000039996.3 244059 5322 64 ENSG00000126246.8 IGFLR1 chr19 35738801 35742453 - protein_coding KNOWN OTTHUMG00000182064.5 3653 2203 36 ENSG00000267120.3 AD000671.6 chr19 35739252 35745432 - protein_coding NOVEL OTTHUMG00000182065.2 6181 1925 11 ENSG00000161265.13 U2AF1L4 chr19 35742464 35745445 - protein_coding KNOWN OTTHUMG00000182066.7 2982 2875 109 ENSG00000205155.6 PSENEN chr19 35745114 35747519 + protein_coding KNOWN OTTHUMG00000182067.3 2406 1845 11 ENSG00000188223.9 AC002398.9 chr19 35745678 35754519 + protein_coding NOVEL OTTHUMG00000182068.4 8842 1037 11 ENSG00000267439.1 AC002398.11 chr19 35747057 35753415 - antisense NOVEL OTTHUMG00000182069.3 6359 2040 4 ENSG00000267796.6 LIN37 chr19 35748361 35754519 + protein_coding KNOWN OTTHUMG00000182070.6 6159 2820 43 ENSG00000267328.1 AC002398.12 chr19 35754566 35755490 + antisense NOVEL OTTHUMG00000182297.1 925 660 2 ENSG00000004776.10 HSPB6 chr19 35754568 35758079 - protein_coding KNOWN OTTHUMG00000048122.3 3512 1722 9 ENSG00000167595.13 PROSER3 chr19 35758143 35771028 + protein_coding KNOWN OTTHUMG00000168103.8 12886 6327 75 ENSG00000224727.1 FCF1P7 chr1 243267257 243268119 - processed_pseudogene KNOWN OTTHUMG00000039997.1 863 558 2 ENSG00000267049.1 AC002398.13 chr19 35769144 35771028 - antisense NOVEL OTTHUMG00000182373.1 1885 427 2 ENSG00000004777.17 ARHGAP33 chr19 35774532 35788822 + protein_coding KNOWN OTTHUMG00000182071.4 14291 5260 118 ENSG00000225872.2 LINC01529 chr19 35788876 35797885 - lincRNA NOVEL OTTHUMG00000048120.2 9010 2488 13 ENSG00000250799.8 PRODH2 chr19 35799988 35813299 - protein_coding KNOWN OTTHUMG00000180688.5 13312 2731 29 ENSG00000161270.18 NPHS1 chr19 35825964 35869287 - protein_coding KNOWN OTTHUMG00000180689.4 43324 5459 68 ENSG00000126259.18 KIRREL2 chr19 35855861 35867109 + protein_coding KNOWN OTTHUMG00000180691.6 11249 3382 67 ENSG00000105290.10 APLP1 chr19 35867899 35879791 + protein_coding KNOWN OTTHUMG00000180692.3 11893 3656 106 ENSG00000243968.2 RN7SL402P chr19 35881890 35882153 + misc_RNA KNOWN NA 264 264 1 ENSG00000167604.12 NFKBID chr19 35887653 35902303 - protein_coding KNOWN OTTHUMG00000180760.5 14651 3198 63 ENSG00000280194.1 AD000864.6 chr19 35901561 35903855 - TEC KNOWN OTTHUMG00000181738.1 2295 2295 1 ENSG00000265201.1 MIR4677 chr1 243346176 243346255 + miRNA KNOWN NA 80 80 1 ENSG00000126264.8 HCST chr19 35902480 35904377 + protein_coding KNOWN OTTHUMG00000048132.3 1898 613 8 ENSG00000011600.10 TYROBP chr19 35904401 35908295 - protein_coding KNOWN OTTHUMG00000181739.4 3895 907 40 ENSG00000126243.7 LRFN3 chr19 35935358 35945767 + protein_coding KNOWN OTTHUMG00000181740.2 10410 4044 11 ENSG00000267786.1 AF038458.3 chr19 35947115 35959192 + lincRNA NOVEL OTTHUMG00000181741.1 12078 500 4 ENSG00000267113.1 AF038458.4 chr19 35957121 35957382 - processed_pseudogene KNOWN OTTHUMG00000181743.1 262 262 1 ENSG00000267388.1 AF038458.5 chr19 35960512 35964063 + lincRNA NOVEL OTTHUMG00000181744.1 3552 600 2 ENSG00000205138.3 SDHAF1 chr19 35995199 35996315 + protein_coding KNOWN OTTHUMG00000181745.2 1117 1117 1 ENSG00000181392.13 SYNE4 chr19 36003307 36008793 - protein_coding KNOWN OTTHUMG00000048135.4 5487 2528 38 ENSG00000248101.2 AC002116.8 chr19 36008638 36014235 - processed_transcript NOVEL OTTHUMG00000181895.1 5598 1130 7 ENSG00000239382.9 ALKBH6 chr19 36009120 36014239 - protein_coding KNOWN OTTHUMG00000048137.11 5120 4293 102 ENSG00000117020.15 AKT3 chr1 243488233 243851079 - protein_coding KNOWN OTTHUMG00000039994.4 362847 9475 78 ENSG00000267698.1 AC002116.7 chr19 36014508 36045972 + antisense NOVEL OTTHUMG00000181746.1 31465 643 4 ENSG00000105270.13 CLIP3 chr19 36014660 36033343 - protein_coding KNOWN OTTHUMG00000181747.3 18684 3772 40 ENSG00000161277.10 THAP8 chr19 36034985 36054762 - protein_coding KNOWN OTTHUMG00000048138.5 19778 1825 12 ENSG00000075702.15 WDR62 chr19 36054881 36105106 + protein_coding KNOWN OTTHUMG00000048139.6 50226 9775 119 ENSG00000280023.1 LLNLR-276H7.1 chr19 36070239 36071070 + TEC KNOWN OTTHUMG00000186386.1 832 832 1 ENSG00000105261.6 OVOL3 chr19 36111202 36113711 + protein_coding KNOWN OTTHUMG00000181748.5 2510 696 3 ENSG00000105258.7 POLR2I chr19 36113710 36115346 - protein_coding KNOWN OTTHUMG00000181749.1 1637 1269 35 ENSG00000105254.10 TBCB chr19 36114289 36125947 + protein_coding KNOWN OTTHUMG00000048143.6 11659 3326 55 ENSG00000279504.1 AD001527.4 chr19 36114362 36115146 + TEC KNOWN OTTHUMG00000181750.1 785 785 1 ENSG00000126247.9 CAPNS1 chr19 36139575 36150353 + protein_coding KNOWN OTTHUMG00000160811.8 10779 3478 138 ENSG00000236031.1 RP11-269F20.1 chr1 243545532 243548329 + antisense NOVEL OTTHUMG00000040016.1 2798 751 3 ENSG00000270760.1 AD001527.7 chr19 36144081 36148348 - antisense NOVEL OTTHUMG00000184249.1 4268 379 2 ENSG00000161281.9 COX7A1 chr19 36150922 36152869 - protein_coding KNOWN OTTHUMG00000048144.5 1948 1006 15 ENSG00000267005.1 AC002984.2 chr19 36173406 36173853 - processed_pseudogene KNOWN OTTHUMG00000181885.1 448 448 1 ENSG00000196357.10 ZNF565 chr19 36182060 36246257 - protein_coding KNOWN OTTHUMG00000180508.1 64198 3953 30 ENSG00000200179.1 Y_RNA chr19 36203347 36203459 - misc_RNA NOVEL NA 113 113 1 ENSG00000167635.10 ZNF146 chr19 36214602 36238774 + protein_coding KNOWN OTTHUMG00000180511.1 24173 4146 15 ENSG00000267053.5 CTD-3162L10.1 chr19 36304580 36312668 + lincRNA NOVEL OTTHUMG00000180576.1 8089 2674 13 ENSG00000232677.5 LINC00665 chr19 36313067 36331718 - lincRNA NOVEL OTTHUMG00000048145.3 18652 7201 37 ENSG00000142065.12 ZFP14 chr19 36334453 36379199 - protein_coding KNOWN OTTHUMG00000180675.2 44747 7817 8 ENSG00000266973.1 CTD-3162L10.3 chr19 36378028 36378832 + antisense NOVEL OTTHUMG00000180676.1 805 566 2 ENSG00000226766.1 FABP7P1 chr1 243624666 243625056 - processed_pseudogene KNOWN OTTHUMG00000040017.1 391 391 1 ENSG00000267363.1 CTD-3162L10.4 chr19 36379351 36380912 - lincRNA NOVEL OTTHUMG00000180677.1 1562 249 2 ENSG00000181007.8 ZFP82 chr19 36383120 36418656 - protein_coding KNOWN OTTHUMG00000048146.3 35537 7506 8 ENSG00000267142.1 CTD-3162L10.5 chr19 36421536 36422534 + processed_pseudogene KNOWN OTTHUMG00000180678.1 999 999 1 ENSG00000186017.13 ZNF566 chr19 36445119 36489902 - protein_coding KNOWN OTTHUMG00000048148.3 44784 6481 41 ENSG00000267309.1 CTD-2630F21.1 chr19 36489649 36491040 + antisense NOVEL OTTHUMG00000180679.1 1392 1392 1 ENSG00000267091.1 CTBP2P7 chr19 36496916 36498159 - processed_pseudogene KNOWN OTTHUMG00000180713.1 1244 1244 1 ENSG00000254004.5 ZNF260 chr19 36510695 36528660 - protein_coding KNOWN OTTHUMG00000048155.3 17966 5952 14 ENSG00000228629.2 AC092295.4 chr19 36528318 36535235 + antisense NOVEL OTTHUMG00000048149.1 6918 434 3 ENSG00000186020.11 ZNF529 chr19 36534774 36605276 - protein_coding KNOWN OTTHUMG00000180714.1 70503 8173 38 ENSG00000233527.7 ZNF529-AS1 chr19 36573070 36594708 + antisense NOVEL OTTHUMG00000048152.3 21639 1868 16 ENSG00000232184.1 RP11-370K11.1 chr1 243702857 243740821 - sense_intronic NOVEL OTTHUMG00000039995.1 37965 389 3 ENSG00000161298.15 ZNF382 chr19 36604817 36634113 + protein_coding KNOWN OTTHUMG00000048153.5 29297 11318 28 ENSG00000197808.10 ZNF461 chr19 36637192 36666853 - protein_coding KNOWN OTTHUMG00000180832.2 29662 4204 57 ENSG00000276071.1 CTD-3234P18.6 chr19 36668102 36669404 + lincRNA NOVEL OTTHUMG00000186726.2 1303 1303 1 ENSG00000225975.5 LINC01534 chr19 36685440 36687449 - lincRNA NOVEL OTTHUMG00000048158.2 2010 1138 9 ENSG00000189042.12 ZNF567 chr19 36687612 36727701 + protein_coding KNOWN OTTHUMG00000180898.1 40090 4724 30 ENSG00000267041.4 ZNF850 chr19 36714383 36772825 - protein_coding KNOWN OTTHUMG00000180899.1 58443 7850 14 ENSG00000267260.1 CTD-2162K18.4 chr19 36773153 36777078 + lincRNA NOVEL OTTHUMG00000180901.1 3926 2050 4 ENSG00000267353.1 CTD-2162K18.3 chr19 36773712 36775908 - lincRNA NOVEL OTTHUMG00000180902.1 2197 2197 1 ENSG00000267254.4 ZNF790-AS1 chr19 36797518 36828115 + antisense KNOWN OTTHUMG00000180904.1 30598 1506 14 ENSG00000197863.7 ZNF790 chr19 36817428 36850787 - protein_coding KNOWN OTTHUMG00000165616.3 33360 3851 39 ENSG00000228939.1 AKT3-IT1 chr1 243793205 243794400 - sense_intronic NOVEL OTTHUMG00000039993.1 1196 517 2 ENSG00000251247.8 ZNF345 chr19 36850361 36913029 + protein_coding KNOWN OTTHUMG00000048162.3 62669 4738 49 ENSG00000206669.1 Y_RNA chr19 36858227 36858329 - misc_RNA NOVEL NA 103 103 1 ENSG00000185869.12 ZNF829 chr19 36888124 36916291 - protein_coding KNOWN OTTHUMG00000048161.3 28168 7742 24 ENSG00000243297.2 RPL31P61 chr19 36901742 36902117 + processed_pseudogene KNOWN OTTHUMG00000158179.2 376 376 1 ENSG00000198453.11 ZNF568 chr19 36916329 36998700 + protein_coding KNOWN OTTHUMG00000048160.6 82372 9437 89 ENSG00000197050.9 ZNF420 chr19 37007857 37130314 + protein_coding KNOWN OTTHUMG00000048168.4 122458 4023 38 ENSG00000275547.1 CTD-2293H3.3 chr19 37024886 37025254 - unprocessed_pseudogene KNOWN OTTHUMG00000188008.1 369 369 1 ENSG00000267345.1 CTD-2293H3.2 chr19 37075113 37078605 - antisense NOVEL OTTHUMG00000181856.1 3493 572 2 ENSG00000267672.1 CTD-2293H3.1 chr19 37091341 37092564 + sense_intronic NOVEL OTTHUMG00000181794.1 1224 1224 1 ENSG00000267360.5 CTC-454I21.3 chr19 37093019 37210512 - protein_coding NOVEL OTTHUMG00000181859.2 117494 1654 14 ENSG00000226828.1 RP11-278H7.1 chr1 243917402 244047317 + lincRNA NOVEL OTTHUMG00000040014.1 129916 1799 12 ENSG00000196967.9 ZNF585A chr19 37106734 37172741 - protein_coding KNOWN OTTHUMG00000181857.4 66008 10758 35 ENSG00000267437.1 CTC-454I21.4 chr19 37128679 37141640 - antisense NOVEL OTTHUMG00000181862.2 12962 319 3 ENSG00000245680.8 ZNF585B chr19 37181579 37218153 - protein_coding KNOWN OTTHUMG00000048165.4 36575 7538 39 ENSG00000188283.10 ZNF383 chr19 37217926 37248738 + protein_coding KNOWN OTTHUMG00000181890.3 30813 8417 38 ENSG00000226686.6 LINC01535 chr19 37251912 37265535 + lincRNA NOVEL OTTHUMG00000048167.2 13624 2187 27 ENSG00000267605.4 CTD-3220F14.1 chr19 37265939 37271518 - lincRNA NOVEL OTTHUMG00000180577.2 5580 2781 13 ENSG00000181666.16 HKR1 chr19 37312837 37369365 + protein_coding KNOWN OTTHUMG00000181937.4 56529 7203 126 ENSG00000276846.1 CTD-3220F14.3 chr19 37314868 37315620 - antisense NOVEL OTTHUMG00000186729.1 753 753 1 ENSG00000267682.1 CTD-3220F14.2 chr19 37337236 37337743 + sense_intronic NOVEL OTTHUMG00000181938.1 508 375 2 ENSG00000189164.13 ZNF527 chr19 37371061 37393066 + protein_coding KNOWN OTTHUMG00000048173.2 22006 6436 35 ENSG00000179743.3 FLJ37453 chr1 15834479 15848147 - antisense NOVEL OTTHUMG00000009375.1 13669 2468 2 ENSG00000179456.10 ZBTB18 chr1 244048939 244057476 + protein_coding KNOWN OTTHUMG00000040013.2 8538 3906 4 ENSG00000279936.1 CTD-2086O20.1 chr19 37401404 37403846 - TEC KNOWN OTTHUMG00000175771.1 2443 2443 1 ENSG00000196437.9 ZNF569 chr19 37411155 37469275 - protein_coding KNOWN OTTHUMG00000048172.2 58121 5016 40 ENSG00000171827.9 ZNF570 chr19 37467585 37488652 + protein_coding KNOWN OTTHUMG00000048176.3 21068 6246 30 ENSG00000266916.4 ZNF793-AS1 chr19 37497159 37507046 - antisense NOVEL OTTHUMG00000181988.2 9888 1321 13 ENSG00000267115.1 CTD-3064H18.2 chr19 37503906 37504465 - lincRNA NOVEL OTTHUMG00000181989.1 560 560 1 ENSG00000188227.11 ZNF793 chr19 37506939 37548762 + protein_coding KNOWN OTTHUMG00000182003.3 41824 12007 59 ENSG00000180458.2 CTD-3064H18.4 chr19 37545470 37549171 - antisense NOVEL OTTHUMG00000182015.1 3702 3267 2 ENSG00000267470.4 ZNF571-AS1 chr19 37548914 37587348 + antisense NOVEL OTTHUMG00000182052.2 38435 4560 43 ENSG00000171817.15 ZNF540 chr19 37551406 37614097 + protein_coding KNOWN OTTHUMG00000182053.3 62692 4304 42 ENSG00000180479.12 ZNF571 chr19 37554782 37594790 - protein_coding KNOWN OTTHUMG00000182016.2 40009 6206 25 ENSG00000279774.1 RP11-278H7.5 chr1 244064330 244067909 + TEC KNOWN OTTHUMG00000150374.2 3580 3580 1 ENSG00000120784.14 ZFP30 chr19 37613749 37692337 - protein_coding KNOWN OTTHUMG00000048177.4 78589 7705 60 ENSG00000196381.9 ZNF781 chr19 37667751 37692322 - protein_coding KNOWN OTTHUMG00000182106.2 24572 3617 17 ENSG00000267552.5 CTD-2528L19.4 chr19 37689865 37719188 - protein_coding NOVEL OTTHUMG00000182107.2 29324 785 16 ENSG00000267319.1 CTD-2528L19.3 chr19 37693280 37693564 - processed_pseudogene KNOWN OTTHUMG00000182109.1 285 285 1 ENSG00000198182.11 ZNF607 chr19 37696363 37719790 - protein_coding KNOWN OTTHUMG00000182108.2 23428 4740 22 ENSG00000267152.1 CTD-2528L19.6 chr19 37728586 37730643 - lincRNA NOVEL OTTHUMG00000182110.1 2058 1360 2 ENSG00000189144.12 ZNF573 chr19 37735833 37817300 - protein_coding KNOWN OTTHUMG00000048183.3 81468 4689 83 ENSG00000267422.1 CTD-2554C21.1 chr19 37779686 37792865 + transcribed_processed_pseudogene KNOWN OTTHUMG00000182154.1 13180 1432 3 ENSG00000267640.4 CTD-2554C21.2 chr19 37817359 37826638 + lincRNA NOVEL OTTHUMG00000182155.1 9280 1352 19 ENSG00000225868.5 AC016582.2 chr19 37823722 37855215 - lincRNA NOVEL OTTHUMG00000048186.2 31494 2188 17 ENSG00000229960.1 RP11-278H7.4 chr1 244068820 244093026 - lincRNA NOVEL OTTHUMG00000150375.1 24207 468 5 ENSG00000229481.2 CTD-2554C21.3 chr19 37829551 37832160 + lincRNA NOVEL OTTHUMG00000182156.2 2610 2610 1 ENSG00000171804.8 WDR87 chr19 37884823 37906677 - protein_coding KNOWN OTTHUMG00000048187.4 21855 9199 22 ENSG00000105738.9 SIPA1L3 chr19 37907228 38208372 + protein_coding KNOWN OTTHUMG00000073727.3 301145 10335 50 ENSG00000268051.1 CTC-244M17.1 chr19 37963853 37964790 + sense_intronic NOVEL OTTHUMG00000182399.1 938 607 2 ENSG00000221258.1 AC011465.1 chr19 38053878 38053965 - miRNA NOVEL NA 88 88 1 ENSG00000268764.1 CTC-450M9.1 chr19 38108500 38109533 - antisense NOVEL OTTHUMG00000182400.1 1034 328 2 ENSG00000269653.1 CTB-102L5.7 chr19 38184376 38186265 + sense_intronic NOVEL OTTHUMG00000182401.1 1890 1890 1 ENSG00000268499.1 CTB-102L5.8 chr19 38199836 38200934 + sense_intronic NOVEL OTTHUMG00000182402.1 1099 432 2 ENSG00000275132.1 Metazoa_SRP chr19 38200234 38200532 + misc_RNA NOVEL NA 299 299 1 ENSG00000011332.18 DPF1 chr19 38211006 38229714 - protein_coding KNOWN OTTHUMG00000157164.3 18709 4800 152 ENSG00000244066.3 RN7SL148P chr1 244103932 244104210 + misc_RNA KNOWN NA 279 279 1 ENSG00000167642.11 SPINT2 chr19 38244035 38292614 + protein_coding KNOWN OTTHUMG00000181891.2 48580 5199 45 ENSG00000167641.9 PPP1R14A chr19 38251237 38256591 - protein_coding KNOWN OTTHUMG00000181892.1 5355 1501 16 ENSG00000267748.4 CTB-102L5.4 chr19 38289151 38304910 + protein_coding PUTATIVE OTTHUMG00000181893.3 15760 546 12 ENSG00000200209.1 Y_RNA chr19 38294544 38294636 + misc_RNA NOVEL NA 93 93 1 ENSG00000167644.10 C19orf33 chr19 38304161 38305009 + protein_coding KNOWN OTTHUMG00000181894.2 849 617 14 ENSG00000167645.15 YIF1B chr19 38305104 38317273 - protein_coding KNOWN OTTHUMG00000182324.3 12170 3193 97 ENSG00000099337.4 KCNK6 chr19 38319844 38332076 + protein_coding KNOWN OTTHUMG00000182325.2 12233 6169 5 ENSG00000099338.21 CATSPERG chr19 38335775 38370943 + protein_coding KNOWN OTTHUMG00000153223.5 35169 9190 194 ENSG00000266963.1 AC005625.1 chr19 38361795 38362484 - antisense NOVEL OTTHUMG00000182326.1 690 472 2 ENSG00000099341.10 PSMD8 chr19 38374536 38383824 + protein_coding KNOWN OTTHUMG00000150691.4 9289 3105 52 ENSG00000237759.1 RP11-278H7.3 chr1 244107365 244109011 + lincRNA NOVEL OTTHUMG00000040015.1 1647 567 2 ENSG00000179168.13 GGN chr19 38384265 38388082 - protein_coding KNOWN OTTHUMG00000182080.1 3818 2447 17 ENSG00000267090.1 AC005789.9 chr19 38385522 38386759 + antisense NOVEL OTTHUMG00000182081.1 1238 297 2 ENSG00000188766.11 SPRED3 chr19 38388421 38399587 + protein_coding KNOWN OTTHUMG00000182082.3 11167 5864 32 ENSG00000130244.11 FAM98C chr19 38403135 38409088 + protein_coding KNOWN OTTHUMG00000182084.1 5954 4598 44 ENSG00000171777.14 RASGRP4 chr19 38409051 38426305 - protein_coding KNOWN OTTHUMG00000182327.3 17255 4183 297 ENSG00000196218.10 RYR1 chr19 38433699 38587564 + protein_coding KNOWN OTTHUMG00000182403.3 153866 15965 418 ENSG00000269445.1 AC067969.1 chr19 38526954 38528555 - antisense NOVEL OTTHUMG00000182523.1 1602 570 3 ENSG00000268055.1 AC067969.2 chr19 38535517 38537128 - antisense NOVEL OTTHUMG00000182524.1 1612 552 2 ENSG00000280910.1 AC067969.3 chr19 38535953 38536046 - miRNA NOVEL NA 94 94 1 ENSG00000104814.11 MAP4K1 chr19 38587641 38618882 - protein_coding KNOWN OTTHUMG00000180863.1 31242 3953 186 ENSG00000173728.9 C1orf100 chr1 244352635 244389663 + protein_coding KNOWN OTTHUMG00000040104.1 37029 1151 16 ENSG00000267291.1 CTB-186G2.1 chr19 38596346 38601694 + antisense NOVEL OTTHUMG00000180864.1 5349 516 3 ENSG00000178982.8 EIF3K chr19 38619082 38636955 + protein_coding KNOWN OTTHUMG00000180865.3 17874 2798 78 ENSG00000130402.10 ACTN4 chr19 38647649 38731583 + protein_coding KNOWN OTTHUMG00000137382.3 83935 6098 89 ENSG00000267375.1 CTB-186G2.4 chr19 38683873 38693606 - antisense NOVEL OTTHUMG00000182086.1 9734 242 2 ENSG00000182472.7 CAPN12 chr19 38730187 38769904 - protein_coding KNOWN OTTHUMG00000182525.2 39718 5966 90 ENSG00000267892.1 CTD-2540F13.2 chr19 38738284 38739863 + antisense NOVEL OTTHUMG00000182526.1 1580 1580 1 ENSG00000205076.4 LGALS7 chr19 38770971 38773492 - protein_coding KNOWN OTTHUMG00000182606.1 2522 795 6 ENSG00000178934.4 LGALS7B chr19 38789211 38791749 + protein_coding KNOWN OTTHUMG00000182607.1 2539 644 6 ENSG00000207296.1 RNU6-140P chr19 38797002 38797109 - snRNA KNOWN NA 108 108 1 ENSG00000171747.7 LGALS4 chr19 38801671 38813364 - protein_coding KNOWN OTTHUMG00000182608.1 11694 2645 46 ENSG00000240963.1 RP11-518L10.5 chr1 244375100 244409592 - antisense NOVEL OTTHUMG00000040105.1 34493 642 4 ENSG00000104823.7 ECH1 chr19 38815422 38832005 - protein_coding KNOWN OTTHUMG00000182609.1 16584 2467 74 ENSG00000268083.4 AC104534.3 chr19 38817471 38840178 - protein_coding PUTATIVE OTTHUMG00000182610.1 22708 963 12 ENSG00000268756.1 AC104534.2 chr19 38820166 38823223 + antisense NOVEL OTTHUMG00000182611.1 3058 566 2 ENSG00000104824.15 HNRNPL chr19 38836388 38852347 - protein_coding KNOWN OTTHUMG00000182612.1 15960 6821 101 ENSG00000269688.1 AC008982.2 chr19 38844729 38845499 - sense_intronic NOVEL OTTHUMG00000182613.1 771 493 2 ENSG00000187994.12 RINL chr19 38867834 38878279 - protein_coding KNOWN OTTHUMG00000182299.4 10446 4201 52 ENSG00000269050.1 CTC-360G5.6 chr19 38870159 38873763 + antisense NOVEL OTTHUMG00000182690.1 3605 504 3 ENSG00000068903.18 SIRT2 chr19 38878555 38899862 - protein_coding KNOWN OTTHUMG00000150480.2 21308 6224 168 ENSG00000104825.15 NFKBIB chr19 38899700 38908893 + protein_coding KNOWN OTTHUMG00000177631.1 9194 2324 31 ENSG00000262484.1 CCER2 chr19 38908980 38912158 - protein_coding KNOWN OTTHUMG00000177374.1 3179 1057 8 ENSG00000225401.2 TGIF2P1 chr1 244394976 244395660 - transcribed_processed_pseudogene KNOWN OTTHUMG00000040101.2 685 685 1 ENSG00000104835.13 SARS2 chr19 38915266 38930896 - protein_coding KNOWN OTTHUMG00000182691.1 15631 3231 111 ENSG00000269547.1 CTC-360G5.8 chr19 38915404 38949855 - protein_coding PUTATIVE OTTHUMG00000182716.1 34452 1967 20 ENSG00000128626.10 MRPS12 chr19 38930548 38933162 + protein_coding KNOWN OTTHUMG00000182692.2 2615 2144 10 ENSG00000269486.2 CTC-360G5.9 chr19 38935297 38938632 - lincRNA NOVEL OTTHUMG00000182717.2 3336 3336 1 ENSG00000269190.4 FBXO17 chr19 38941401 38975910 - protein_coding KNOWN OTTHUMG00000182718.3 34510 4960 30 ENSG00000161243.7 FBXO27 chr19 38990714 39032785 - protein_coding KNOWN OTTHUMG00000182719.1 42072 2833 33 ENSG00000267992.1 CTB-189B5.3 chr19 39030436 39031323 + antisense NOVEL OTTHUMG00000182720.1 888 797 2 ENSG00000183760.9 PAPL chr19 39083913 39111493 + protein_coding KNOWN OTTHUMG00000182799.1 27581 3107 42 ENSG00000130669.16 PAK4 chr19 39125770 39182816 + protein_coding KNOWN OTTHUMG00000182800.1 57047 7115 77 ENSG00000269172.1 CTC-218B8.3 chr19 39134882 39136463 - antisense NOVEL OTTHUMG00000182801.1 1582 365 2 ENSG00000035687.9 ADSS chr1 244408494 244452134 - protein_coding KNOWN OTTHUMG00000040102.2 43641 3666 22 ENSG00000188505.4 NCCRP1 chr19 39196961 39201884 + protein_coding KNOWN OTTHUMG00000182802.1 4924 1978 6 ENSG00000179751.6 SYCN chr19 39202831 39204266 - protein_coding KNOWN OTTHUMG00000182803.1 1436 573 2 ENSG00000268510.1 IFNL3P1 chr19 39236433 39237293 - unprocessed_pseudogene KNOWN OTTHUMG00000182804.1 861 501 3 ENSG00000197110.7 IFNL3 chr19 39243553 39245129 - protein_coding KNOWN OTTHUMG00000182805.1 1577 771 11 ENSG00000272395.4 IFNL4 chr19 39246314 39248856 - polymorphic_pseudogene KNOWN OTTHUMG00000185299.2 2543 1836 15 ENSG00000213926.3 MSRB1P1 chr19 39254916 39255269 - processed_pseudogene KNOWN OTTHUMG00000168117.1 354 354 1 ENSG00000272311.1 IFNL4P1 chr19 39264382 39265817 + unprocessed_pseudogene KNOWN OTTHUMG00000185300.2 1436 540 5 ENSG00000183709.7 IFNL2 chr19 39268514 39270092 + protein_coding KNOWN OTTHUMG00000182806.1 1579 737 6 ENSG00000182393.2 IFNL1 chr19 39296325 39298673 + protein_coding KNOWN OTTHUMG00000182807.1 2349 857 5 ENSG00000128011.4 LRFN1 chr19 39306568 39315336 - protein_coding KNOWN OTTHUMG00000182808.1 8769 3381 2 ENSG00000179397.16 C1orf101 chr1 244454377 244641177 + protein_coding KNOWN OTTHUMG00000040103.2 186801 4333 124 ENSG00000268262.1 CTC-246B18.8 chr19 39314651 39320858 - sense_overlapping NOVEL OTTHUMG00000182810.1 6208 877 4 ENSG00000130755.11 GMFG chr19 39328353 39342372 - protein_coding KNOWN OTTHUMG00000182811.2 14020 1490 66 ENSG00000269246.1 CTC-246B18.10 chr19 39341773 39341945 - lincRNA NOVEL OTTHUMG00000183224.1 173 173 1 ENSG00000179134.13 SAMD4B chr19 39342396 39385710 + protein_coding KNOWN OTTHUMG00000182967.1 43315 8057 96 ENSG00000241983.3 RN7SL566P chr19 39369153 39369448 + misc_RNA KNOWN NA 296 296 1 ENSG00000006712.13 PAF1 chr19 39385852 39391195 - protein_coding KNOWN OTTHUMG00000182968.1 5344 2668 54 ENSG00000063322.12 MED29 chr19 39391303 39400637 + protein_coding KNOWN OTTHUMG00000182969.2 9335 3835 27 ENSG00000128016.5 ZFP36 chr19 39406813 39409412 + protein_coding KNOWN OTTHUMG00000182970.1 2600 2010 8 ENSG00000266559.1 MIR4530 chr19 39409623 39409678 - miRNA KNOWN NA 56 56 1 ENSG00000090924.13 PLEKHG2 chr19 39412585 39428415 + protein_coding KNOWN OTTHUMG00000152570.6 15831 9200 111 ENSG00000065526.9 SPEN chr1 15847864 15940460 + protein_coding KNOWN OTTHUMG00000009376.1 92597 13294 30 ENSG00000238952.1 AC099757.1 chr1 244589546 244589644 - miRNA NOVEL NA 99 99 1 ENSG00000105193.7 RPS16 chr19 39433207 39435948 - protein_coding KNOWN OTTHUMG00000182972.2 2742 2603 31 ENSG00000196235.12 SUPT5H chr19 39436156 39476670 + protein_coding KNOWN OTTHUMG00000182973.3 40515 8568 220 ENSG00000105197.9 TIMM50 chr19 39480412 39493785 + protein_coding KNOWN OTTHUMG00000183066.3 13374 6911 123 ENSG00000090932.9 DLL3 chr19 39498895 39508481 + protein_coding KNOWN OTTHUMG00000183067.1 9587 2618 29 ENSG00000186838.12 SELV chr19 39515113 39520686 + protein_coding KNOWN OTTHUMG00000166446.2 5574 1731 26 ENSG00000176401.5 EID2B chr19 39530990 39532854 - protein_coding KNOWN OTTHUMG00000183068.1 1865 1865 3 ENSG00000269792.1 CTB-60E11.9 chr19 39532412 39534422 + antisense NOVEL OTTHUMG00000183069.1 2011 647 3 ENSG00000269584.1 TDGF1P7 chr19 39534463 39535021 + processed_pseudogene KNOWN OTTHUMG00000183070.1 559 559 1 ENSG00000176396.9 EID2 chr19 39538250 39540230 - protein_coding KNOWN OTTHUMG00000074073.2 1981 1981 1 ENSG00000269588.1 CTB-60E11.11 chr19 39553034 39555356 + unprocessed_pseudogene KNOWN OTTHUMG00000183071.1 2323 440 2 ENSG00000227735.1 CYCSP5 chr1 244598391 244598687 - processed_pseudogene KNOWN OTTHUMG00000040399.1 297 297 1 ENSG00000269188.1 CTB-60E11.12 chr19 39584042 39586489 + unprocessed_pseudogene KNOWN OTTHUMG00000183072.1 2448 469 3 ENSG00000244253.1 RPS29P24 chr19 39588955 39589125 + processed_pseudogene KNOWN OTTHUMG00000158191.1 171 171 1 ENSG00000243581.1 RPS29P25 chr19 39590981 39591151 + processed_pseudogene KNOWN OTTHUMG00000158190.1 171 171 1 ENSG00000239320.1 RPS29P26 chr19 39597832 39598002 + processed_pseudogene KNOWN OTTHUMG00000158189.1 171 171 1 ENSG00000105198.9 LGALS13 chr19 39602501 39607476 + protein_coding KNOWN OTTHUMG00000183073.1 4976 711 14 ENSG00000269519.1 AC005176.1 chr19 39631300 39631446 - processed_pseudogene KNOWN OTTHUMG00000183080.1 147 147 1 ENSG00000268153.4 AC005176.2 chr19 39638685 39642401 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000183081.1 3717 1835 10 ENSG00000268243.1 AC005176.3 chr19 39644502 39644612 + processed_pseudogene KNOWN OTTHUMG00000183082.1 111 111 1 ENSG00000249861.3 LGALS16 chr19 39655894 39660647 + protein_coding KNOWN OTTHUMG00000183083.2 4754 679 8 ENSG00000226025.8 LGALS17A chr19 39679374 39686373 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000141285.2 7000 2570 22 ENSG00000121644.17 DESI2 chr1 244652935 244709033 + protein_coding KNOWN OTTHUMG00000040398.1 56099 5104 15 ENSG00000269460.1 AC093063.3 chr19 39685244 39694577 + lincRNA NOVEL OTTHUMG00000183084.1 9334 289 2 ENSG00000268088.1 AC093063.2 chr19 39693925 39696258 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000183085.1 2334 363 3 ENSG00000240320.1 AC006133.3 chr19 39697904 39698073 + processed_pseudogene KNOWN OTTHUMG00000158194.1 170 170 1 ENSG00000006659.11 LGALS14 chr19 39704306 39709444 + protein_coding KNOWN OTTHUMG00000183143.1 5139 1079 12 ENSG00000278813.1 AC006133.7 chr19 39726030 39726775 - unprocessed_pseudogene KNOWN OTTHUMG00000188009.1 746 264 2 ENSG00000105205.6 CLC chr19 39731250 39738028 - protein_coding KNOWN OTTHUMG00000183144.1 6779 635 4 ENSG00000213921.6 LEUTX chr19 39776595 39786135 + protein_coding KNOWN OTTHUMG00000170877.3 9541 671 3 ENSG00000276445.1 LLNLR-268E12.1 chr19 39812972 39813555 - lincRNA KNOWN OTTHUMG00000186731.1 584 584 1 ENSG00000105204.12 DYRK1B chr19 39825350 39834201 - protein_coding KNOWN OTTHUMG00000182584.4 8852 3192 67 ENSG00000277759.1 MIR6719 chr19 39829716 39829802 - miRNA KNOWN NA 87 87 1 ENSG00000232059.3 RP11-173A6.2 chr1 244694432 244694720 - processed_pseudogene KNOWN OTTHUMG00000040400.2 289 289 1 ENSG00000105202.6 FBL chr19 39834458 39846414 - protein_coding KNOWN OTTHUMG00000182581.6 11957 2182 73 ENSG00000275395.3 FCGBP chr19 39863323 39934626 - protein_coding KNOWN OTTHUMG00000182580.4 71304 12961 41 ENSG00000187534.6 PRR13P5 chr19 39943239 39943680 - processed_pseudogene KNOWN OTTHUMG00000182585.1 442 442 1 ENSG00000013275.6 PSMC4 chr19 39971005 39981441 + protein_coding KNOWN OTTHUMG00000182577.2 10437 2387 51 ENSG00000187187.12 ZNF546 chr19 39984134 40021041 + protein_coding KNOWN OTTHUMG00000182578.6 36908 9007 49 ENSG00000221233.2 AC007842.1 chr19 39991944 39992039 - miRNA NOVEL NA 96 96 1 ENSG00000269069.1 CTC-471F3.5 chr19 40023384 40025502 - processed_pseudogene KNOWN OTTHUMG00000182630.1 2119 2039 2 ENSG00000128000.14 ZNF780B chr19 40028260 40056209 - protein_coding KNOWN OTTHUMG00000155118.3 27950 9217 35 ENSG00000269749.1 AC005614.5 chr19 40048757 40090925 - processed_transcript KNOWN OTTHUMG00000182662.2 42169 461 7 ENSG00000197782.13 ZNF780A chr19 40069152 40090938 - protein_coding KNOWN OTTHUMG00000155119.4 21787 7972 65 ENSG00000203667.8 COX20 chr1 244835322 244845057 + protein_coding KNOWN OTTHUMG00000040401.1 9736 4864 19 ENSG00000269296.1 AC005614.3 chr19 40090754 40094406 + antisense KNOWN OTTHUMG00000182660.1 3653 3653 1 ENSG00000230086.1 VN1R96P chr19 40121311 40122168 - unitary_pseudogene KNOWN OTTHUMG00000154501.1 858 858 1 ENSG00000130758.6 MAP3K10 chr19 40191744 40215575 + protein_coding KNOWN OTTHUMG00000182591.2 23832 4566 38 ENSG00000221051.1 AC118344.1 chr19 40204112 40204199 + miRNA NOVEL NA 88 88 1 ENSG00000174521.7 TTC9B chr19 40216058 40218399 - protein_coding KNOWN OTTHUMG00000182600.1 2342 2342 4 ENSG00000105219.7 CNTD2 chr19 40222208 40226690 - protein_coding KNOWN OTTHUMG00000160481.3 4483 2039 20 ENSG00000105221.15 AKT2 chr19 40230317 40285536 - protein_coding KNOWN OTTHUMG00000137375.19 55220 15035 256 ENSG00000205041.1 CTC-425O23.2 chr19 40273489 40275479 - sense_intronic NOVEL OTTHUMG00000178320.1 1991 1462 2 ENSG00000207631.1 MIR641 chr19 40282543 40282641 - miRNA KNOWN NA 99 99 1 ENSG00000206674.1 RNU6-945P chr19 40299478 40299584 - snRNA KNOWN NA 107 107 1 ENSG00000188206.6 HNRNPU-AS1 chr1 244840638 244846903 - antisense KNOWN OTTHUMG00000040397.3 6266 5007 2 ENSG00000160392.12 C19orf47 chr19 40319536 40348527 - protein_coding KNOWN OTTHUMG00000179028.1 28992 4875 54 ENSG00000207281.1 Y_RNA chr19 40339059 40339164 - misc_RNA NOVEL NA 106 106 1 ENSG00000206925.1 Y_RNA chr19 40342329 40342441 + misc_RNA NOVEL NA 113 113 1 ENSG00000105223.17 PLD3 chr19 40348456 40380439 + protein_coding KNOWN OTTHUMG00000152736.6 31984 5184 146 ENSG00000279759.1 CTC-425O23.5 chr19 40355842 40360606 + TEC KNOWN OTTHUMG00000182601.1 4765 4765 1 ENSG00000275652.1 MIR6796 chr19 40369846 40369907 + miRNA KNOWN NA 62 62 1 ENSG00000160396.8 HIPK4 chr19 40379271 40390187 - protein_coding KNOWN OTTHUMG00000182598.1 10917 2452 4 ENSG00000105227.13 PRX chr19 40393768 40413366 - protein_coding KNOWN OTTHUMG00000182597.2 19599 5767 16 ENSG00000197019.4 SERTAD1 chr19 40421592 40426025 - protein_coding KNOWN OTTHUMG00000182594.2 4434 2114 2 ENSG00000277453.1 CTC-492K19.7 chr19 40426115 40426702 + lincRNA NOVEL OTTHUMG00000186751.1 588 588 1 ENSG00000277877.3 RP11-11N7.5 chr1 244845167 244855497 - protein_coding NOVEL OTTHUMG00000188118.1 10331 682 9 ENSG00000167565.11 SERTAD3 chr19 40440844 40444705 - protein_coding KNOWN OTTHUMG00000182595.2 3862 2218 11 ENSG00000268366.1 CTC-492K19.4 chr19 40443436 40444087 + antisense NOVEL OTTHUMG00000182596.1 652 558 2 ENSG00000090013.8 BLVRB chr19 40447789 40465840 - protein_coding KNOWN OTTHUMG00000182593.2 18052 1665 17 ENSG00000277510.1 Metazoa_SRP chr19 40450225 40450480 + misc_RNA NOVEL NA 256 256 1 ENSG00000160460.14 SPTBN4 chr19 40466241 40576464 + protein_coding KNOWN OTTHUMG00000182592.5 110224 11549 234 ENSG00000160410.13 SHKBP1 chr19 40576851 40591399 + protein_coding KNOWN OTTHUMG00000182602.9 14549 3936 196 ENSG00000090006.16 LTBP4 chr19 40592883 40629818 + protein_coding KNOWN OTTHUMG00000182635.11 36936 8108 284 ENSG00000279183.1 FKSG66 chr19 40647563 40647937 + protein_coding KNOWN NA 375 375 1 ENSG00000105245.8 NUMBL chr19 40665905 40690972 - protein_coding KNOWN OTTHUMG00000182627.4 25068 5823 66 ENSG00000123815.10 ADCK4 chr19 40691529 40718207 - protein_coding KNOWN OTTHUMG00000182620.5 26679 5488 119 ENSG00000153187.15 HNRNPU chr1 244851166 244864542 - protein_coding KNOWN OTTHUMG00000040396.4 13377 8488 55 ENSG00000223284.1 RNU6-195P chr19 40708055 40708163 - snRNA KNOWN NA 109 109 1 ENSG00000086544.2 ITPKC chr19 40717103 40740860 + protein_coding KNOWN OTTHUMG00000182688.2 23758 3385 11 ENSG00000188493.13 C19orf54 chr19 40740856 40751553 - protein_coding KNOWN OTTHUMG00000150174.5 10698 3375 57 ENSG00000077312.7 SNRPA chr19 40750637 40765389 + protein_coding KNOWN OTTHUMG00000182689.5 14753 2361 46 ENSG00000261857.5 MIA chr19 40771648 40777490 + protein_coding KNOWN OTTHUMG00000182693.2 5843 1304 26 ENSG00000268975.1 MIA-RAB4B chr19 40771648 40786685 + protein_coding NOVEL OTTHUMG00000182782.2 15038 1229 9 ENSG00000167578.15 RAB4B chr19 40778216 40796944 + protein_coding KNOWN OTTHUMG00000182694.4 18729 3937 54 ENSG00000171570.9 RAB4B-EGLN2 chr19 40778242 40808198 + protein_coding KNOWN OTTHUMG00000182702.3 29957 2589 22 ENSG00000269858.4 EGLN2 chr19 40798996 40808433 + protein_coding KNOWN OTTHUMG00000182703.3 9438 6577 59 ENSG00000268797.1 CTC-490E21.12 chr19 40801297 40898282 + protein_coding NOVEL OTTHUMG00000182828.1 96986 575 4 ENSG00000273175.1 RP11-11N7.4 chr1 244864738 244865272 + lincRNA NOVEL OTTHUMG00000185822.1 535 535 1 ENSG00000233622.1 CYP2T1P chr19 40808525 40811390 - unitary_pseudogene KNOWN OTTHUMG00000154549.1 2866 1285 8 ENSG00000237118.2 CYP2F2P chr19 40818721 40826772 - unitary_pseudogene KNOWN OTTHUMG00000154548.1 8052 1056 6 ENSG00000269843.1 CTC-490E21.10 chr19 40831221 40837210 - lincRNA NOVEL OTTHUMG00000182774.1 5990 482 2 ENSG00000279108.1 CTC-490E21.11 chr19 40840159 40842039 + TEC KNOWN OTTHUMG00000182783.1 1881 1881 1 ENSG00000255974.5 CYP2A6 chr19 40843538 40882210 - protein_coding KNOWN OTTHUMG00000182713.5 38673 2316 33 ENSG00000198077.9 CYP2A7 chr19 40875439 40882752 - protein_coding KNOWN OTTHUMG00000182715.3 7314 2583 28 ENSG00000130612.13 CYP2G1P chr19 40890826 40900508 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000182772.3 9683 2511 11 ENSG00000198251.7 CTC-490E21.13 chr19 40908480 40910685 - unprocessed_pseudogene KNOWN OTTHUMG00000182829.2 2206 641 4 ENSG00000256612.6 CYP2B7P chr19 40924219 40950660 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000182706.6 26442 4064 34 ENSG00000269353.1 AC092071.1 chr19 40946347 40947450 + sense_intronic NOVEL OTTHUMG00000182775.1 1104 549 2 ENSG00000201758.1 RN7SKP55 chr1 244943910 244944216 + misc_RNA KNOWN NA 307 307 1 ENSG00000197408.7 CYP2B6 chr19 40991299 41018398 + protein_coding KNOWN OTTHUMG00000182714.3 27100 3589 24 ENSG00000213908.4 CYP2A7P1 chr19 41024268 41027720 - unprocessed_pseudogene KNOWN OTTHUMG00000182830.1 3453 815 5 ENSG00000268101.2 CYP2G2P chr19 41050449 41062444 - unprocessed_pseudogene KNOWN OTTHUMG00000182851.2 11996 1485 9 ENSG00000271299.1 CTD-2356P16.6 chr19 41073804 41074107 - processed_pseudogene KNOWN OTTHUMG00000184961.1 304 304 1 ENSG00000197838.4 CYP2A13 chr19 41088472 41096195 + protein_coding KNOWN OTTHUMG00000182762.1 7724 1739 9 ENSG00000197446.7 CYP2F1 chr19 41114432 41128366 + protein_coding KNOWN OTTHUMG00000167412.5 13935 2994 38 ENSG00000268529.1 CYP2T3P chr19 41134722 41137308 + unprocessed_pseudogene KNOWN OTTHUMG00000182855.1 2587 817 7 ENSG00000224476.3 RPL36P16 chr19 41169861 41170166 + processed_pseudogene KNOWN OTTHUMG00000158200.1 306 306 1 ENSG00000264423.2 RN7SL718P chr19 41190927 41191229 - misc_RNA KNOWN NA 303 303 1 ENSG00000167600.12 CYP2S1 chr19 41193049 41207539 + protein_coding KNOWN OTTHUMG00000182721.3 14491 2874 32 ENSG00000270620.1 RP1-134O19.3 chr1 15917698 15917908 - unprocessed_pseudogene KNOWN OTTHUMG00000184271.1 211 211 1 ENSG00000252073.1 RNU6-947P chr1 244954858 244954963 + snRNA KNOWN NA 106 106 1 ENSG00000167601.10 AXL chr19 41219203 41261766 + protein_coding KNOWN OTTHUMG00000182727.3 42564 5154 72 ENSG00000269652.1 CTD-2195B23.3 chr19 41221426 41222051 - antisense NOVEL OTTHUMG00000182739.1 626 286 2 ENSG00000105323.15 HNRNPUL1 chr19 41262496 41307598 + protein_coding KNOWN OTTHUMG00000182740.5 45103 6543 187 ENSG00000239868.3 RN7SL34P chr19 41286424 41286693 - misc_RNA KNOWN NA 270 270 1 ENSG00000105329.8 TGFB1 chr19 41301587 41353911 - protein_coding KNOWN OTTHUMG00000182760.5 52325 3238 17 ENSG00000142039.3 CCDC97 chr19 41310189 41324883 + protein_coding KNOWN OTTHUMG00000182722.3 14695 3821 9 ENSG00000255730.3 CTC-435M10.3 chr19 41350853 41425004 + protein_coding KNOWN OTTHUMG00000168134.1 74152 2350 21 ENSG00000142046.13 TMEM91 chr19 41350911 41384083 + protein_coding KNOWN OTTHUMG00000168127.2 33173 2796 50 ENSG00000123810.6 B9D2 chr19 41354421 41364173 - protein_coding KNOWN OTTHUMG00000182758.1 9753 1316 12 ENSG00000277744.1 CTC-435M10.12 chr19 41373971 41374419 + sense_intronic NOVEL OTTHUMG00000186754.1 449 449 1 ENSG00000272195.1 RP11-156E8.1 chr1 244969350 244971088 - antisense NOVEL OTTHUMG00000185820.1 1739 1739 1 ENSG00000077348.7 EXOSC5 chr19 41386374 41397479 - protein_coding KNOWN OTTHUMG00000182759.1 11106 1488 21 ENSG00000248098.9 BCKDHA chr19 41397460 41431345 + protein_coding KNOWN OTTHUMG00000168128.3 33886 2892 53 ENSG00000268987.1 CTC-435M10.10 chr19 41399372 41400365 + sense_intronic NOVEL OTTHUMG00000182773.1 994 540 2 ENSG00000268475.1 CTC-435M10.6 chr19 41425359 41426237 + antisense NOVEL OTTHUMG00000182748.1 879 344 2 ENSG00000177191.2 B3GNT8 chr19 41425359 41428730 - protein_coding KNOWN OTTHUMG00000182749.1 3372 1874 7 ENSG00000105341.17 ATP5SL chr19 41431318 41440717 - protein_coding KNOWN OTTHUMG00000182342.4 9400 4381 68 ENSG00000277136.1 Metazoa_SRP chr19 41442102 41442392 - misc_RNA NOVEL NA 291 291 1 ENSG00000204978.2 ERICH4 chr19 41443158 41444765 + protein_coding KNOWN OTTHUMG00000187130.1 1608 946 2 ENSG00000267107.5 PCAT19 chr19 41454169 41500649 - lincRNA NOVEL OTTHUMG00000182344.3 46481 3884 22 ENSG00000268034.1 AC005795.1 chr19 41506152 41506898 + processed_pseudogene KNOWN OTTHUMG00000182621.1 747 747 1 ENSG00000203666.11 EFCAB2 chr1 244969705 245127164 + protein_coding KNOWN OTTHUMG00000040474.4 157460 8607 91 ENSG00000269800.1 PLEKHA3P1 chr19 41521043 41521989 - processed_pseudogene KNOWN OTTHUMG00000182622.2 947 894 2 ENSG00000268355.1 AC006129.1 chr19 41531206 41532174 + lincRNA NOVEL OTTHUMG00000182623.2 969 969 4 ENSG00000270164.1 LINC01480 chr19 41535183 41536904 + lincRNA NOVEL OTTHUMG00000184156.2 1722 1722 9 ENSG00000268027.4 AC006129.2 chr19 41545192 41555462 + lincRNA NOVEL OTTHUMG00000182624.2 10271 1440 14 ENSG00000007129.16 CEACAM21 chr19 41549518 41586844 + protein_coding KNOWN OTTHUMG00000151062.6 37327 1922 38 ENSG00000280014.1 AC006129.3 chr19 41551568 41552274 - TEC KNOWN OTTHUMG00000182625.2 707 707 1 ENSG00000105388.13 CEACAM5 chr19 41576273 41729798 + protein_coding KNOWN OTTHUMG00000151061.3 153526 3426 67 ENSG00000239736.2 CEACAMP3 chr19 41599735 41605984 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000151558.3 6250 1927 6 ENSG00000269266.1 DNAJC19P2 chr19 41605341 41605671 - processed_pseudogene KNOWN OTTHUMG00000182626.1 331 302 2 ENSG00000105352.9 CEACAM4 chr19 41618971 41627074 - protein_coding KNOWN OTTHUMG00000151065.3 8104 1364 15 ENSG00000252282.1 RNU6-1089P chr1 245023015 245023118 + snRNA KNOWN NA 104 104 1 ENSG00000268997.1 DNAJC19P3 chr19 41638569 41638899 - processed_pseudogene KNOWN OTTHUMG00000182636.1 331 331 1 ENSG00000269354.1 AC005626.3 chr19 41639659 41640602 - processed_pseudogene KNOWN OTTHUMG00000182637.1 944 255 2 ENSG00000268582.1 AC005794.1 chr19 41652676 41652963 + processed_pseudogene KNOWN OTTHUMG00000182638.1 288 288 1 ENSG00000007306.13 CEACAM7 chr19 41673307 41706976 - protein_coding KNOWN OTTHUMG00000151063.3 33670 2649 17 ENSG00000267881.1 AC011513.3 chr19 41708612 41761282 + protein_coding NOVEL OTTHUMG00000182656.1 52671 716 5 ENSG00000086548.8 CEACAM6 chr19 41750977 41772208 + protein_coding KNOWN OTTHUMG00000151064.3 21232 3052 10 ENSG00000268833.1 AC011513.4 chr19 41757898 41786893 - antisense NOVEL OTTHUMG00000182657.1 28996 567 2 ENSG00000170956.15 CEACAM3 chr19 41796437 41811553 + protein_coding KNOWN OTTHUMG00000150142.4 15117 3080 37 ENSG00000269119.1 HNRNPA1P52 chr19 41829692 41830938 + processed_pseudogene KNOWN OTTHUMG00000182661.1 1247 947 2 ENSG00000278239.1 AC020956.3 chr19 41833686 41835950 - lincRNA NOVEL OTTHUMG00000188263.1 2265 2265 1 ENSG00000251754.1 RNU6-999P chr1 245043928 245044032 + snRNA KNOWN NA 105 105 1 ENSG00000273111.4 LYPD4 chr19 41837074 41844697 - protein_coding KNOWN OTTHUMG00000182674.4 7624 2165 16 ENSG00000142025.14 DMRTC2 chr19 41844743 41852333 + protein_coding KNOWN OTTHUMG00000182675.2 7591 3389 46 ENSG00000105372.5 RPS19 chr19 41859918 41872926 + protein_coding KNOWN OTTHUMG00000182676.2 13009 3805 38 ENSG00000276926.1 MIR6797 chr19 41869627 41869698 + miRNA KNOWN NA 72 72 1 ENSG00000105369.8 CD79A chr19 41877120 41881372 + protein_coding KNOWN OTTHUMG00000182678.1 4253 1503 13 ENSG00000076928.16 ARHGEF1 chr19 41883161 41930150 + protein_coding KNOWN OTTHUMG00000182679.4 46990 8636 271 ENSG00000268041.1 CTD-2575K13.6 chr19 41908519 41910097 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000182736.1 1579 707 6 ENSG00000105404.9 RABAC1 chr19 41956681 41959390 - protein_coding KNOWN OTTHUMG00000182737.1 2710 1999 33 ENSG00000105409.14 ATP1A3 chr19 41966582 41997497 - protein_coding KNOWN OTTHUMG00000137384.7 30916 5122 130 ENSG00000105737.8 GRIK5 chr19 41998321 42069498 - protein_coding KNOWN OTTHUMG00000044573.2 71178 5014 85 ENSG00000223353.2 RP11-290P14.2 chr1 245123471 245124450 - processed_pseudogene KNOWN OTTHUMG00000040475.2 980 791 2 ENSG00000105732.11 ZNF574 chr19 42068477 42081565 + protein_coding KNOWN OTTHUMG00000182751.1 13089 4682 13 ENSG00000268525.1 CTB-59C6.3 chr19 42078588 42080107 - antisense NOVEL OTTHUMG00000182752.1 1520 543 2 ENSG00000028277.19 POU2F2 chr19 42086110 42196585 - protein_coding KNOWN OTTHUMG00000165991.10 110476 8903 183 ENSG00000254887.1 CTC-378H22.1 chr19 42132555 42137099 + processed_transcript NOVEL OTTHUMG00000165992.1 4545 897 5 ENSG00000266226.1 MIR4323 chr19 42133445 42133513 - miRNA KNOWN NA 69 69 1 ENSG00000259436.1 CTC-378H22.2 chr19 42152569 42157523 + antisense NOVEL OTTHUMG00000171961.1 4955 1955 2 ENSG00000160570.12 DEDD2 chr19 42198598 42220140 - protein_coding KNOWN OTTHUMG00000182763.3 21543 2631 60 ENSG00000167625.9 ZNF526 chr19 42220271 42228201 + protein_coding KNOWN OTTHUMG00000182785.2 7931 4271 6 ENSG00000105723.10 GSK3A chr19 42230186 42242625 - protein_coding KNOWN OTTHUMG00000150722.2 12440 4126 36 ENSG00000268643.1 AC006486.9 chr19 42234583 42255132 - protein_coding NOVEL OTTHUMG00000182786.1 20550 634 5 ENSG00000201170.1 RNU1-132P chr1 245133927 245134090 - snRNA KNOWN NA 164 164 1 ENSG00000279539.1 AC006486.10 chr19 42242775 42244973 + TEC KNOWN OTTHUMG00000182787.1 2199 2199 1 ENSG00000105722.8 ERF chr19 42247572 42255157 - protein_coding KNOWN OTTHUMG00000182788.1 7586 3295 22 ENSG00000079432.6 CIC chr19 42268537 42295797 + protein_coding KNOWN OTTHUMG00000182794.2 27261 9494 82 ENSG00000079462.6 PAFAH1B3 chr19 42297033 42303546 - protein_coding KNOWN OTTHUMG00000182795.1 6514 1419 40 ENSG00000188368.8 PRR19 chr19 42302098 42310821 + protein_coding KNOWN OTTHUMG00000182796.1 8724 2575 10 ENSG00000167619.10 TMEM145 chr19 42313325 42325062 + protein_coding KNOWN OTTHUMG00000177694.3 11738 2640 42 ENSG00000105429.11 MEGF8 chr19 42325609 42378769 + protein_coding KNOWN OTTHUMG00000150342.2 53161 11372 135 ENSG00000277533.1 MIR8077 chr19 42351131 42351205 + miRNA KNOWN NA 75 75 1 ENSG00000105427.8 CNFN chr19 42387019 42390287 - protein_coding KNOWN OTTHUMG00000182813.1 3269 603 9 ENSG00000213904.7 LIPE-AS1 chr19 42397128 42652355 + antisense NOVEL OTTHUMG00000182815.3 255228 4208 20 ENSG00000162849.14 KIF26B chr1 245154985 245709431 + protein_coding KNOWN OTTHUMG00000040079.3 554447 14403 34 ENSG00000079435.8 LIPE chr19 42401507 42427426 - protein_coding KNOWN OTTHUMG00000182814.1 25920 5206 38 ENSG00000268605.1 CTB-50E14.4 chr19 42424384 42425071 - sense_intronic NOVEL OTTHUMG00000182816.1 688 561 2 ENSG00000189377.7 CXCL17 chr19 42428288 42443048 - protein_coding KNOWN OTTHUMG00000182817.1 14761 1189 8 ENSG00000253048.1 RNU4-60P chr19 42472875 42473009 + snRNA KNOWN NA 135 135 1 ENSG00000269374.1 CTB-50E14.5 chr19 42485076 42485714 - processed_pseudogene KNOWN OTTHUMG00000182818.1 639 639 1 ENSG00000079385.20 CEACAM1 chr19 42507304 42561234 - protein_coding KNOWN OTTHUMG00000151078.5 53931 5524 78 ENSG00000230558.2 CEACAMP2 chr19 42560433 42561750 - unprocessed_pseudogene KNOWN OTTHUMG00000151119.2 1318 440 2 ENSG00000124469.9 CEACAM8 chr19 42580241 42740384 - protein_coding KNOWN OTTHUMG00000151124.2 160144 2615 13 ENSG00000233681.1 CEACAMP1 chr19 42620212 42633034 - unprocessed_pseudogene KNOWN OTTHUMG00000151128.2 12823 1035 5 ENSG00000231561.2 CEACAMP5 chr19 42654200 42669076 + unprocessed_pseudogene KNOWN OTTHUMG00000151122.2 14877 961 5 ENSG00000232192.1 RP11-62I21.1 chr1 245206444 245234501 - antisense NOVEL OTTHUMG00000040077.1 28058 810 5 ENSG00000243167.1 RPS10P28 chr19 42670005 42670816 + processed_pseudogene KNOWN OTTHUMG00000158201.1 812 498 2 ENSG00000277756.1 AC005204.1 chr19 42673581 42673680 - miRNA NOVEL NA 100 100 1 ENSG00000221826.8 PSG3 chr19 42721638 42740569 - protein_coding KNOWN OTTHUMG00000151120.3 18932 3486 34 ENSG00000124467.17 PSG8 chr19 42752686 42855691 - protein_coding KNOWN OTTHUMG00000151118.3 103006 4090 37 ENSG00000238092.1 CEACAMP6 chr19 42781206 42786595 - unprocessed_pseudogene KNOWN OTTHUMG00000151126.2 5390 574 3 ENSG00000225877.1 AC004603.4 chr19 42821863 42826878 + lincRNA NOVEL OTTHUMG00000151551.1 5016 1873 4 ENSG00000248257.6 PSG10P chr19 42839368 42855718 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000151550.4 16351 1819 12 ENSG00000231924.8 PSG1 chr19 42866464 42879822 - protein_coding KNOWN OTTHUMG00000151123.2 13359 4961 47 ENSG00000170848.14 PSG6 chr19 42902079 42919563 - protein_coding KNOWN OTTHUMG00000151127.4 17485 5140 34 ENSG00000221878.9 PSG7 chr19 42906822 43082671 - protein_coding KNOWN OTTHUMG00000151125.9 175850 5961 33 ENSG00000232793.2 DNAJC19P8 chr1 245282831 245283089 - processed_pseudogene KNOWN OTTHUMG00000040078.2 259 259 1 ENSG00000227349.1 CEACAMP7 chr19 42949503 42950387 - unprocessed_pseudogene KNOWN OTTHUMG00000151121.2 885 496 2 ENSG00000243130.6 PSG11 chr19 43007656 43026512 - protein_coding KNOWN OTTHUMG00000151546.3 18857 5032 47 ENSG00000236932.2 CEACAMP8 chr19 43035869 43041248 - unprocessed_pseudogene KNOWN OTTHUMG00000151548.2 5380 580 3 ENSG00000242221.7 PSG2 chr19 43064211 43083045 - protein_coding KNOWN OTTHUMG00000151547.2 18835 2798 15 ENSG00000230529.1 CEACAMP9 chr19 43096456 43097360 - unprocessed_pseudogene KNOWN OTTHUMG00000151549.1 905 513 2 ENSG00000227606.2 AC005392.13 chr19 43153279 43160862 + lincRNA NOVEL OTTHUMG00000151543.1 7584 500 3 ENSG00000204941.12 PSG5 chr19 43166256 43186536 - protein_coding KNOWN OTTHUMG00000151539.3 20281 4678 45 ENSG00000243137.6 PSG4 chr19 43192702 43207299 - protein_coding KNOWN OTTHUMG00000151544.5 14598 6274 57 ENSG00000183668.16 PSG9 chr19 43211791 43269530 - protein_coding KNOWN OTTHUMG00000182826.1 57740 5048 41 ENSG00000241104.4 CEACAMP10 chr19 43211791 43248646 - transcribed_processed_pseudogene KNOWN OTTHUMG00000151538.1 36856 1962 11 ENSG00000116809.10 ZBTB17 chr1 15941869 15976132 - protein_coding KNOWN OTTHUMG00000009377.2 34264 4240 93 ENSG00000221165.1 AL359983.1 chr1 245370334 245370419 + miRNA NOVEL NA 86 86 1 ENSG00000236123.1 CEACAMP11 chr19 43278933 43284318 - unprocessed_pseudogene KNOWN OTTHUMG00000151540.1 5386 583 3 ENSG00000230681.1 CEACAMP4 chr19 43303171 43304523 - unprocessed_pseudogene KNOWN OTTHUMG00000151545.1 1353 421 2 ENSG00000231412.2 CTC-490G23.2 chr19 43329295 43331430 - lincRNA NOVEL OTTHUMG00000182827.1 2136 301 2 ENSG00000204936.8 CD177 chr19 43353659 43363172 + protein_coding KNOWN OTTHUMG00000185320.3 9514 2501 21 ENSG00000272396.1 CTC-490G23.4 chr19 43360685 43368970 - antisense NOVEL OTTHUMG00000185321.1 8286 459 3 ENSG00000204933.3 CD177P1 chr19 43372742 43379123 - unprocessed_pseudogene KNOWN OTTHUMG00000185322.1 6382 935 6 ENSG00000131126.17 TEX101 chr19 43401496 43418597 + protein_coding KNOWN OTTHUMG00000182695.2 17102 1597 20 ENSG00000124466.8 LYPD3 chr19 43460787 43465660 - protein_coding KNOWN OTTHUMG00000182696.2 4874 2519 14 ENSG00000176531.9 PHLDB3 chr19 43474954 43504935 - protein_coding KNOWN OTTHUMG00000150693.4 29982 4553 56 ENSG00000105755.6 ETHE1 chr19 43506719 43527244 - protein_coding KNOWN OTTHUMG00000182697.2 20526 1604 30 ENSG00000238224.1 RP11-522M21.2 chr1 245614773 245615145 - antisense NOVEL OTTHUMG00000040080.1 373 271 2 ENSG00000176472.9 ZNF575 chr19 43525497 43536130 + protein_coding KNOWN OTTHUMG00000182698.3 10634 3222 18 ENSG00000073050.10 XRCC1 chr19 43543040 43580473 - protein_coding KNOWN OTTHUMG00000182699.2 37434 3459 76 ENSG00000269177.1 L34079.3 chr19 43553445 43555494 + antisense NOVEL OTTHUMG00000182732.1 2050 561 2 ENSG00000268361.1 L34079.2 chr19 43554692 43593036 - protein_coding PUTATIVE OTTHUMG00000182700.1 38345 393 3 ENSG00000269583.1 L34079.4 chr19 43574638 43575618 + antisense NOVEL OTTHUMG00000182733.1 981 546 2 ENSG00000234465.9 PINLYP chr19 43576800 43583964 + protein_coding KNOWN OTTHUMG00000175560.4 7165 3570 28 ENSG00000167378.7 IRGQ chr19 43584369 43596135 - protein_coding KNOWN OTTHUMG00000182701.2 11767 9869 10 ENSG00000124444.14 ZNF576 chr19 43596392 43601157 + protein_coding KNOWN OTTHUMG00000165479.2 4766 3481 19 ENSG00000226763.4 SRRM5 chr19 43596617 43614497 + protein_coding KNOWN OTTHUMG00000165480.2 17881 2698 4 ENSG00000131116.10 ZNF428 chr19 43607219 43619874 - protein_coding KNOWN OTTHUMG00000182734.2 12656 1803 9 ENSG00000231612.1 RP11-522M21.3 chr1 245673732 245676478 - antisense NOVEL OTTHUMG00000040081.1 2747 447 2 ENSG00000105767.2 CADM4 chr19 43622368 43639839 - protein_coding KNOWN OTTHUMG00000182735.2 17472 2246 12 ENSG00000011422.10 PLAUR chr19 43646095 43670547 - protein_coding KNOWN OTTHUMG00000182778.1 24453 4457 69 ENSG00000239948.2 RN7SL368P chr19 43660500 43660776 - misc_RNA KNOWN NA 277 277 1 ENSG00000124449.6 IRGC chr19 43716010 43720021 + protein_coding KNOWN OTTHUMG00000154587.2 4012 1775 4 ENSG00000105771.12 SMG9 chr19 43727992 43754990 - protein_coding KNOWN OTTHUMG00000150337.3 26999 7927 73 ENSG00000104783.10 KCNN4 chr19 43766533 43781257 - protein_coding KNOWN OTTHUMG00000182779.1 14725 3289 47 ENSG00000268601.1 AC115522.3 chr19 43794309 43795658 - lincRNA NOVEL OTTHUMG00000182780.1 1350 556 2 ENSG00000159871.13 LYPD5 chr19 43795929 43827206 - protein_coding KNOWN OTTHUMG00000182781.2 31278 5091 29 ENSG00000167637.15 ZNF283 chr19 43827292 43852017 + protein_coding KNOWN OTTHUMG00000182186.2 24726 7229 48 ENSG00000176222.8 ZNF404 chr19 43872363 43901385 - protein_coding KNOWN OTTHUMG00000182206.1 29023 2479 9 ENSG00000185420.17 SMYD3 chr1 245749342 246507312 - protein_coding KNOWN OTTHUMG00000040508.5 757971 5752 102 ENSG00000278917.1 RP11-15A1.4 chr19 43891233 43895411 + TEC KNOWN OTTHUMG00000182207.1 4179 4179 1 ENSG00000267058.1 RP11-15A1.3 chr19 43891804 43901805 - lincRNA NOVEL OTTHUMG00000182208.1 10002 2193 5 ENSG00000267191.1 RP11-15A1.2 chr19 43902001 43926545 + antisense NOVEL OTTHUMG00000182188.1 24545 517 3 ENSG00000124459.10 ZNF45 chr19 43912629 43935278 - protein_coding KNOWN OTTHUMG00000182189.1 22650 4393 29 ENSG00000159905.13 ZNF221 chr19 43951223 43967709 + protein_coding KNOWN OTTHUMG00000182214.2 16487 2717 26 ENSG00000204920.9 ZNF155 chr19 43967862 43998325 + protein_coding KNOWN OTTHUMG00000182215.2 30464 3454 40 ENSG00000277806.1 RP11-15A1.8 chr19 43976815 43977448 + sense_intronic NOVEL OTTHUMG00000189065.1 634 634 1 ENSG00000278492.1 RP11-15A1.9 chr19 43978376 43978663 + sense_intronic NOVEL OTTHUMG00000189066.1 288 288 1 ENSG00000266921.1 RP11-15A1.7 chr19 43996896 44002836 - antisense NOVEL OTTHUMG00000182306.1 5941 2909 5 ENSG00000159882.11 ZNF230 chr19 44002948 44013926 + protein_coding KNOWN OTTHUMG00000182307.1 10979 6298 18 ENSG00000280657.1 SMYD3 chr1 245749563 246355081 - protein_coding KNOWN NA 605519 1110 11 ENSG00000267144.1 AC067968.3 chr19 44023604 44025262 - lincRNA NOVEL OTTHUMG00000182308.1 1659 566 3 ENSG00000159885.12 ZNF222 chr19 44025342 44033112 + protein_coding KNOWN OTTHUMG00000182309.2 7771 2003 17 ENSG00000267022.1 AC084219.2 chr19 44025354 44087318 + protein_coding NOVEL OTTHUMG00000182310.1 61965 3766 11 ENSG00000178386.11 ZNF223 chr19 44051367 44067991 + protein_coding KNOWN OTTHUMG00000182311.2 16625 3329 21 ENSG00000186026.6 ZNF284 chr19 44072144 44089613 + protein_coding KNOWN OTTHUMG00000182312.1 17470 4351 5 ENSG00000253021.1 RNU6-902P chr19 44085213 44085303 - snRNA KNOWN NA 91 91 1 ENSG00000267680.4 ZNF224 chr19 44094339 44109886 + protein_coding KNOWN OTTHUMG00000182313.2 15548 7104 28 ENSG00000267163.1 AC084219.3 chr19 44094350 44099711 - antisense NOVEL OTTHUMG00000182314.1 5362 2139 2 ENSG00000186019.10 AC084219.4 chr19 44105463 44113145 - antisense NOVEL OTTHUMG00000182335.1 7683 3488 4 ENSG00000256294.6 ZNF225 chr19 44112181 44134816 + protein_coding KNOWN OTTHUMG00000182336.3 22636 7226 26 ENSG00000235096.2 RP11-83A16.1 chr1 246025897 246035603 + antisense NOVEL OTTHUMG00000040510.2 9707 696 3 ENSG00000263002.6 ZNF234 chr19 44141557 44160309 + protein_coding KNOWN OTTHUMG00000182337.3 18753 5210 20 ENSG00000167380.15 ZNF226 chr19 44165073 44178381 + protein_coding KNOWN OTTHUMG00000182351.1 13309 6922 110 ENSG00000131115.14 ZNF227 chr19 44207547 44237268 + protein_coding KNOWN OTTHUMG00000182352.1 29722 5069 55 ENSG00000159917.13 ZNF235 chr19 44228729 44305046 - protein_coding KNOWN OTTHUMG00000182353.1 76318 5989 29 ENSG00000279103.1 CTC-204F22.1 chr19 44246478 44248374 - TEC KNOWN OTTHUMG00000175772.1 1897 1897 1 ENSG00000159915.11 ZNF233 chr19 44259880 44275317 + protein_coding KNOWN OTTHUMG00000182354.1 15438 4051 23 ENSG00000270679.1 CTC-512J12.7 chr19 44290081 44290911 + processed_pseudogene KNOWN OTTHUMG00000184978.1 831 526 2 ENSG00000267590.1 NDUFA3P1 chr19 44297104 44297355 + processed_pseudogene KNOWN OTTHUMG00000182355.1 252 252 1 ENSG00000062370.15 ZNF112 chr19 44326555 44367217 - protein_coding KNOWN OTTHUMG00000182357.3 40663 3848 26 ENSG00000267173.1 CTC-512J12.6 chr19 44329695 44401608 - protein_coding NOVEL OTTHUMG00000182375.1 71914 561 5 ENSG00000226876.2 RP11-36N20.1 chr1 246108626 246113866 + antisense NOVEL OTTHUMG00000040511.1 5241 581 4 ENSG00000267508.4 ZNF285 chr19 44382298 44401608 - protein_coding KNOWN OTTHUMG00000178848.4 19311 6866 23 ENSG00000267188.1 CTC-512J12.4 chr19 44392439 44448452 - processed_transcript NOVEL OTTHUMG00000182376.2 56014 574 6 ENSG00000278318.3 ZNF229 chr19 44417519 44448578 - protein_coding KNOWN OTTHUMG00000182377.3 31060 5505 28 ENSG00000176761.7 ZNF285B chr19 44467641 44473227 + unprocessed_pseudogene KNOWN OTTHUMG00000176423.2 5587 1767 2 ENSG00000167384.9 ZNF180 chr19 44474428 44500524 - protein_coding KNOWN OTTHUMG00000180495.3 26097 4783 51 ENSG00000273777.3 CEACAM20 chr19 44501677 44529788 - protein_coding KNOWN OTTHUMG00000151532.3 28112 2193 68 ENSG00000267614.1 AC138472.6 chr19 44536263 44536613 - lincRNA NOVEL OTTHUMG00000180496.2 351 241 2 ENSG00000230666.4 CEACAM22P chr19 44537058 44620821 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000151530.2 83764 3170 16 ENSG00000224366.1 AC138472.4 chr19 44570304 44570564 - unprocessed_pseudogene KNOWN OTTHUMG00000151529.1 261 261 1 ENSG00000216588.7 IGSF23 chr19 44613630 44636781 + protein_coding KNOWN OTTHUMG00000151531.3 23152 1347 16 ENSG00000225222.2 CHCHD4P5 chr1 246178778 246179204 + processed_pseudogene KNOWN OTTHUMG00000057839.2 427 427 1 ENSG00000266903.1 CTB-171A8.1 chr19 44632199 44718759 - antisense NOVEL OTTHUMG00000180497.2 86561 1418 8 ENSG00000073008.13 PVR chr19 44643798 44663583 + protein_coding KNOWN OTTHUMG00000151527.4 19786 3519 41 ENSG00000186567.11 CEACAM19 chr19 44662278 44684359 + protein_coding KNOWN OTTHUMG00000151528.4 22082 5203 49 ENSG00000279095.1 AC092066.1 chr19 44664131 44666158 + TEC KNOWN OTTHUMG00000188264.1 2028 2028 1 ENSG00000213892.9 CEACAM16 chr19 44699151 44710714 + protein_coding KNOWN OTTHUMG00000151519.3 11564 1702 13 ENSG00000252200.1 snoZ6 chr19 44725984 44726058 - snoRNA NOVEL NA 75 75 1 ENSG00000069399.11 BCL3 chr19 44747705 44760044 + protein_coding KNOWN OTTHUMG00000151517.2 12340 3242 41 ENSG00000277736.1 MIR8085 chr19 44758657 44758721 + miRNA KNOWN NA 65 65 1 ENSG00000253027.1 SNORA70 chr19 44764950 44765100 + snoRNA NOVEL NA 151 151 1 ENSG00000236807.1 AC092066.6 chr19 44765148 44765464 + processed_pseudogene KNOWN OTTHUMG00000151518.1 317 317 1 ENSG00000202184.1 RNU6-1283P chr1 246189014 246189118 - snRNA KNOWN NA 105 105 1 ENSG00000142273.9 CBLC chr19 44777869 44800634 + protein_coding KNOWN OTTHUMG00000150715.2 22766 1579 21 ENSG00000187244.9 BCAM chr19 44809059 44821420 + protein_coding KNOWN OTTHUMG00000180838.2 12362 5024 67 ENSG00000130202.8 PVRL2 chr19 44846175 44889228 + protein_coding KNOWN OTTHUMG00000180839.2 43054 3747 25 ENSG00000267282.1 CTB-129P6.4 chr19 44882027 44890876 - antisense NOVEL OTTHUMG00000180840.1 8850 426 2 ENSG00000130204.11 TOMM40 chr19 44890569 44903689 + protein_coding KNOWN OTTHUMG00000180842.1 13121 3610 52 ENSG00000130203.8 APOE chr19 44905754 44909393 + protein_coding KNOWN OTTHUMG00000128901.3 3640 2191 17 ENSG00000280087.1 CTB-129P6.7 chr19 44909375 44914968 + TEC KNOWN OTTHUMG00000180843.1 5594 5594 1 ENSG00000130208.8 APOC1 chr19 44914247 44919349 + protein_coding KNOWN OTTHUMG00000180844.1 5103 1231 33 ENSG00000214855.8 APOC1P1 chr19 44926804 44931386 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000177534.2 4583 938 16 ENSG00000267467.3 APOC4 chr19 44942238 44945496 + protein_coding KNOWN OTTHUMG00000180845.1 3259 741 5 ENSG00000230184.1 SMYD3-IT1 chr1 246321663 246322438 - sense_intronic NOVEL OTTHUMG00000040509.1 776 361 2 ENSG00000224916.7 APOC4-APOC2 chr19 44942238 44949565 + protein_coding KNOWN OTTHUMG00000180846.1 7328 1829 15 ENSG00000234906.7 APOC2 chr19 44946035 44949565 + protein_coding KNOWN OTTHUMG00000180847.2 3531 1263 14 ENSG00000267114.1 CTB-129P6.11 chr19 44950044 44954007 - lincRNA NOVEL OTTHUMG00000180848.1 3964 361 3 ENSG00000104853.14 CLPTM1 chr19 44954585 44993341 + protein_coding KNOWN OTTHUMG00000180849.1 38757 5229 81 ENSG00000104856.12 RELB chr19 45001430 45038198 + protein_coding KNOWN OTTHUMG00000162116.2 36769 3035 48 ENSG00000104859.13 CLASRP chr19 45039040 45070956 + protein_coding KNOWN OTTHUMG00000150189.3 31917 4931 134 ENSG00000207003.1 RNU6-611P chr19 45047458 45047561 + snRNA KNOWN NA 104 104 1 ENSG00000170684.7 ZNF296 chr19 45071500 45076588 - protein_coding KNOWN OTTHUMG00000181766.1 5089 1744 7 ENSG00000267348.2 CTB-179K24.3 chr19 45076510 45090391 - antisense NOVEL OTTHUMG00000181770.1 13882 1002 4 ENSG00000142252.9 GEMIN7 chr19 45079195 45091524 + protein_coding KNOWN OTTHUMG00000181768.1 12330 1915 13 ENSG00000234607.2 RP11-5P18.1 chr1 15969632 15970194 + processed_pseudogene KNOWN OTTHUMG00000009378.2 563 563 1 ENSG00000207326.1 Y_RNA chr1 246426006 246426119 - misc_RNA NOVEL NA 114 114 1 ENSG00000007047.13 MARK4 chr19 45079288 45305283 + protein_coding KNOWN OTTHUMG00000181769.1 225996 6668 87 ENSG00000104866.9 PPP1R37 chr19 45091396 45148077 + protein_coding KNOWN OTTHUMG00000168143.3 56682 7823 38 ENSG00000267346.1 EIF5AP3 chr19 45128569 45129030 + processed_pseudogene KNOWN OTTHUMG00000181771.1 462 462 1 ENSG00000267044.1 AC005757.6 chr19 45135993 45136977 - antisense NOVEL OTTHUMG00000181773.1 985 472 2 ENSG00000267037.1 AC005757.7 chr19 45149750 45150605 - lincRNA NOVEL OTTHUMG00000181774.1 856 856 1 ENSG00000179846.8 NKPD1 chr19 45149750 45160150 - protein_coding KNOWN OTTHUMG00000160521.3 10401 4764 8 ENSG00000007255.9 TRAPPC6A chr19 45162928 45178237 - protein_coding KNOWN OTTHUMG00000181775.1 15310 933 25 ENSG00000189114.6 BLOC1S3 chr19 45178745 45181801 + protein_coding KNOWN OTTHUMG00000181776.1 3057 2666 8 ENSG00000267545.1 AC005779.2 chr19 45179822 45202444 + protein_coding NOVEL OTTHUMG00000181777.1 22623 550 5 ENSG00000266958.1 AC006126.3 chr19 45187388 45216933 + antisense NOVEL OTTHUMG00000181779.1 29546 540 4 ENSG00000227728.2 RP11-690C23.4 chr1 246509038 246522592 - unprocessed_pseudogene KNOWN OTTHUMG00000040557.1 13555 1371 14 ENSG00000130201.6 EXOC3L2 chr19 45212621 45234211 - protein_coding KNOWN OTTHUMG00000155018.1 21591 1725 19 ENSG00000267045.1 AC006126.4 chr19 45238632 45245370 - lincRNA NOVEL OTTHUMG00000181780.1 6739 460 2 ENSG00000104879.4 CKM chr19 45306414 45322977 - protein_coding KNOWN OTTHUMG00000181782.1 16564 1657 8 ENSG00000242675.1 RPS16P9 chr19 45332698 45333124 - processed_pseudogene KNOWN OTTHUMG00000158202.1 427 427 1 ENSG00000104892.15 KLC3 chr19 45333434 45351520 + protein_coding KNOWN OTTHUMG00000143722.3 18087 3654 61 ENSG00000104884.13 ERCC2 chr19 45349837 45370918 - protein_coding KNOWN OTTHUMG00000048190.4 21082 6450 139 ENSG00000275943.1 AC092309.1 chr19 45377222 45377322 - miRNA NOVEL NA 101 101 1 ENSG00000104881.13 PPP1R13L chr19 45379634 45406349 - protein_coding KNOWN OTTHUMG00000181784.1 26716 5032 64 ENSG00000117877.9 CD3EAP chr19 45406209 45410766 + protein_coding KNOWN OTTHUMG00000182120.1 4558 3661 10 ENSG00000012061.14 ERCC1 chr19 45407333 45478828 - protein_coding KNOWN OTTHUMG00000182121.1 71496 5576 113 ENSG00000242042.1 RP11-690C23.2 chr1 246516039 246524287 - lincRNA NOVEL OTTHUMG00000040555.2 8249 964 3 ENSG00000275726.1 MIR6088 chr19 45436654 45436704 + miRNA KNOWN NA 51 51 1 ENSG00000125740.12 FOSB chr19 45467995 45475179 + protein_coding KNOWN OTTHUMG00000182122.1 7185 5553 42 ENSG00000125744.10 RTN2 chr19 45485289 45497061 - protein_coding KNOWN OTTHUMG00000182123.1 11773 3238 85 ENSG00000213889.9 PPM1N chr19 45488777 45502510 + protein_coding KNOWN OTTHUMG00000140397.6 13734 2571 36 ENSG00000125753.12 VASP chr19 45506579 45526983 + protein_coding KNOWN OTTHUMG00000182124.1 20405 3601 57 ENSG00000125741.4 OPA3 chr19 45527427 45602212 - protein_coding KNOWN OTTHUMG00000182125.1 74786 9999 6 ENSG00000177464.4 GPR4 chr19 45589764 45602208 - protein_coding KNOWN OTTHUMG00000182126.1 12445 3145 4 ENSG00000125746.13 EML2 chr19 45606994 45645629 - protein_coding KNOWN OTTHUMG00000182127.1 38636 8224 260 ENSG00000199066.1 MIR330 chr19 45638994 45639087 - miRNA KNOWN NA 94 94 1 ENSG00000267757.3 C19orf83 chr19 45641494 45642840 + protein_coding NOVEL OTTHUMG00000182128.1 1347 1235 10 ENSG00000230813.1 RP11-690C23.5 chr1 246527030 246528155 + unprocessed_pseudogene KNOWN OTTHUMG00000040629.1 1126 417 2 ENSG00000241226.3 RN7SL836P chr19 45651510 45651805 + misc_RNA KNOWN NA 296 296 1 ENSG00000010310.7 GIPR chr19 45668244 45683724 + protein_coding KNOWN OTTHUMG00000182129.1 15481 4736 62 ENSG00000207773.1 MIR642A chr19 45674928 45675024 + miRNA KNOWN NA 97 97 1 ENSG00000125743.9 SNRPD2 chr19 45687454 45692569 - protein_coding KNOWN OTTHUMG00000182130.2 5116 1608 26 ENSG00000011478.10 QPCTL chr19 45692483 45703989 + protein_coding KNOWN OTTHUMG00000182131.1 11507 2396 21 ENSG00000177051.5 FBXO46 chr19 45710629 45730904 - protein_coding KNOWN OTTHUMG00000182132.1 20276 3535 6 ENSG00000279407.1 AC007191.4 chr19 45714387 45717381 - TEC KNOWN OTTHUMG00000182133.1 2995 2995 1 ENSG00000237452.2 BHMG1 chr19 45733251 45764534 + protein_coding PUTATIVE OTTHUMG00000156178.3 31284 2749 15 ENSG00000259605.3 AC074212.5 chr19 45764785 45769806 + processed_transcript NOVEL OTTHUMG00000172207.3 5022 2600 3 ENSG00000177045.7 SIX5 chr19 45764785 45769226 - protein_coding KNOWN OTTHUMG00000172208.3 4442 3556 10 ENSG00000229112.1 RP11-690C23.3 chr1 246528562 246528841 - unprocessed_pseudogene KNOWN OTTHUMG00000040556.1 280 280 1 ENSG00000267395.4 AC074212.6 chr19 45767796 45772504 + antisense NOVEL OTTHUMG00000182333.2 4709 1027 11 ENSG00000104936.16 DMPK chr19 45769717 45782552 - protein_coding KNOWN OTTHUMG00000182334.2 12836 5807 166 ENSG00000268434.4 AC011530.4 chr19 45779437 45785973 - protein_coding NOVEL OTTHUMG00000182481.1 6537 859 16 ENSG00000185800.10 DMWD chr19 45782947 45792802 - protein_coding KNOWN OTTHUMG00000169044.3 9856 5658 20 ENSG00000104941.6 RSPH6A chr19 45795710 45815319 - protein_coding KNOWN OTTHUMG00000182482.1 19610 2547 17 ENSG00000125755.17 SYMPK chr19 45815410 45863290 - protein_coding KNOWN OTTHUMG00000150151.4 47881 10628 194 ENSG00000269148.1 AC092301.3 chr19 45830164 45831108 + antisense NOVEL OTTHUMG00000182483.1 945 764 2 ENSG00000170608.2 FOXA3 chr19 45863989 45873797 + protein_coding KNOWN OTTHUMG00000182484.1 9809 2192 4 ENSG00000170604.4 IRF2BP1 chr19 45883607 45886170 - protein_coding KNOWN OTTHUMG00000182485.1 2564 2564 1 ENSG00000176182.5 MYPOP chr19 45890020 45902604 - protein_coding KNOWN OTTHUMG00000182486.1 12585 1890 3 ENSG00000162851.7 TFB2M chr1 246540560 246566324 - protein_coding KNOWN OTTHUMG00000040091.2 25765 1848 8 ENSG00000188425.3 NANOS2 chr19 45913214 45914870 - protein_coding KNOWN OTTHUMG00000182487.1 1657 1657 1 ENSG00000104967.6 NOVA2 chr19 45933734 45973546 - protein_coding KNOWN OTTHUMG00000177499.3 39813 8684 10 ENSG00000280818.1 AC008623.1 chr19 45938139 45938282 - miRNA NOVEL NA 144 144 1 ENSG00000104983.7 CCDC61 chr19 45995461 46021318 + protein_coding KNOWN OTTHUMG00000182488.1 25858 2588 52 ENSG00000211580.1 MIR769 chr19 46018932 46019049 + miRNA KNOWN NA 118 118 1 ENSG00000008438.4 PGLYRP1 chr19 46019153 46023065 - protein_coding KNOWN OTTHUMG00000182489.1 3913 720 3 ENSG00000268401.1 CTC-344H19.4 chr19 46027654 46030161 + lincRNA NOVEL OTTHUMG00000182490.1 2508 775 5 ENSG00000204869.7 IGFL4 chr19 46039748 46077118 - protein_coding KNOWN OTTHUMG00000182491.1 37371 3725 17 ENSG00000267922.1 AC007193.6 chr19 46101122 46196218 + lincRNA NOVEL OTTHUMG00000182493.1 95097 332 4 ENSG00000268053.1 CTC-344H19.6 chr19 46111079 46113863 - processed_pseudogene KNOWN OTTHUMG00000182494.1 2785 1916 2 ENSG00000162852.12 CNST chr1 246566444 246668584 + protein_coding KNOWN OTTHUMG00000040090.3 102141 5922 32 ENSG00000188624.2 IGFL3 chr19 46120071 46124674 - protein_coding KNOWN OTTHUMG00000172904.1 4604 662 4 ENSG00000259339.2 TGIF1P1 chr19 46136746 46137547 - processed_pseudogene KNOWN OTTHUMG00000158208.3 802 802 1 ENSG00000204866.7 IGFL2 chr19 46143106 46161299 + protein_coding KNOWN OTTHUMG00000182492.1 18194 2426 18 ENSG00000269729.1 AC006262.4 chr19 46163893 46180647 - lincRNA NOVEL OTTHUMG00000182495.1 16755 849 7 ENSG00000268621.4 AC006262.5 chr19 46189166 46203083 - lincRNA NOVEL OTTHUMG00000182496.1 13918 1751 16 ENSG00000268879.1 IGFL1P1 chr19 46196238 46197323 + unprocessed_pseudogene KNOWN OTTHUMG00000182497.1 1086 360 4 ENSG00000268460.1 DKFZp434J0226 chr19 46203426 46214837 + processed_transcript NOVEL OTTHUMG00000182498.1 11412 5911 13 ENSG00000269637.1 RPL12P41 chr19 46219423 46219920 + processed_pseudogene KNOWN OTTHUMG00000182499.1 498 498 1 ENSG00000269745.1 AC006262.10 chr19 46228964 46230388 - antisense NOVEL OTTHUMG00000182500.1 1425 258 2 ENSG00000188293.5 IGFL1 chr19 46229752 46231243 + protein_coding KNOWN OTTHUMG00000182501.1 1492 769 4 ENSG00000225300.1 RP11-1086F11.1 chr1 246605873 246608102 + sense_intronic NOVEL OTTHUMG00000040132.1 2230 1960 2 ENSG00000277748.1 AC006262.11 chr19 46249394 46250163 - unprocessed_pseudogene KNOWN OTTHUMG00000188012.1 770 286 3 ENSG00000268238.1 IGFL1P2 chr19 46260420 46260858 - unprocessed_pseudogene KNOWN OTTHUMG00000182502.1 439 330 2 ENSG00000124440.14 HIF3A chr19 46297046 46343433 + protein_coding KNOWN OTTHUMG00000141296.5 46388 8371 156 ENSG00000199796.1 RNU6-924P chr19 46306470 46306577 - snRNA KNOWN NA 108 108 1 ENSG00000269124.1 AC007193.10 chr19 46320197 46340004 - antisense NOVEL OTTHUMG00000183422.1 19808 472 2 ENSG00000011485.13 PPP5C chr19 46346994 46392981 + protein_coding KNOWN OTTHUMG00000134287.5 45988 7059 92 ENSG00000268810.1 AC007193.9 chr19 46382492 46383169 - antisense NOVEL OTTHUMG00000183423.1 678 448 2 ENSG00000269151.1 AC007193.8 chr19 46390515 46390852 - antisense NOVEL OTTHUMG00000183424.1 338 188 2 ENSG00000169515.5 CCDC8 chr19 46410372 46413584 - protein_coding KNOWN OTTHUMG00000162348.2 3213 3213 1 ENSG00000277531.1 LLNLF-187D8.1 chr19 46424697 46425237 - lincRNA NOVEL OTTHUMG00000186767.2 541 541 1 ENSG00000228955.2 RP11-452J6.2 chr1 246632251 246632478 - processed_pseudogene KNOWN OTTHUMG00000040133.2 228 222 2 ENSG00000182013.16 PNMAL1 chr19 46466491 46471563 - protein_coding KNOWN OTTHUMG00000169421.2 5073 3696 9 ENSG00000230510.5 PPP5D1 chr19 46480796 46601200 - protein_coding KNOWN OTTHUMG00000183425.2 120405 5703 14 ENSG00000204851.6 PNMAL2 chr19 46486906 46496498 - protein_coding KNOWN OTTHUMG00000183426.2 9593 5506 3 ENSG00000204850.4 CTB-158D10.3 chr19 46494508 46496502 + antisense NOVEL OTTHUMG00000186768.2 1995 1995 1 ENSG00000278797.1 LLNLR-276E7.1 chr19 46533669 46534351 + unprocessed_pseudogene KNOWN OTTHUMG00000188014.1 683 683 1 ENSG00000268423.3 AC011551.3 chr19 46547056 46600861 - sense_intronic NOVEL OTTHUMG00000183427.1 53806 845 8 ENSG00000249210.1 GAPDHP38 chr19 46558641 46559642 + processed_pseudogene KNOWN OTTHUMG00000160067.1 1002 1002 1 ENSG00000160014.15 CALM3 chr19 46601074 46610793 + protein_coding KNOWN OTTHUMG00000133517.2 9720 3667 67 ENSG00000269292.1 CTB-12A17.3 chr19 46609277 46610779 - antisense NOVEL OTTHUMG00000183428.1 1503 296 2 ENSG00000160013.7 PTGIR chr19 46620468 46625118 - protein_coding KNOWN OTTHUMG00000183429.1 4651 3546 15 ENSG00000260698.1 RP11-439E19.9 chr1 246682108 246685075 + lincRNA NOVEL OTTHUMG00000176475.1 2968 2968 1 ENSG00000167414.4 GNG8 chr19 46634076 46634685 - protein_coding KNOWN OTTHUMG00000183430.1 610 216 2 ENSG00000279161.1 CTB-12A17.2 chr19 46636810 46639161 - TEC KNOWN OTTHUMG00000175773.1 2352 2352 1 ENSG00000197380.9 DACT3 chr19 46647612 46661138 - protein_coding KNOWN OTTHUMG00000153070.3 13527 5361 11 ENSG00000245598.5 DACT3-AS1 chr19 46660364 46677447 + antisense KNOWN OTTHUMG00000165987.1 17084 1825 8 ENSG00000105287.11 PRKD2 chr19 46674275 46717127 - protein_coding KNOWN OTTHUMG00000183431.2 42853 5446 155 ENSG00000243560.3 RN7SL364P chr19 46688797 46689068 - misc_RNA KNOWN NA 272 272 1 ENSG00000211513.4 MIR320E chr19 46709271 46709382 - miRNA KNOWN NA 112 112 1 ENSG00000090372.13 STRN4 chr19 46719507 46746994 - protein_coding KNOWN OTTHUMG00000183432.4 27488 7641 182 ENSG00000269487.1 CTB-174O21.2 chr19 46728603 46732700 + antisense NOVEL OTTHUMG00000183433.1 4098 562 3 ENSG00000222614.1 Y_RNA chr19 46736312 46736419 + misc_RNA NOVEL NA 108 108 1 ENSG00000231353.1 RP11-5P18.3 chr1 15988182 15988441 + unprocessed_pseudogene KNOWN OTTHUMG00000009380.1 260 260 1 ENSG00000235021.1 RP11-439E19.7 chr1 246690047 246691821 + lincRNA NOVEL OTTHUMG00000161248.1 1775 522 2 ENSG00000181027.9 FKRP chr19 46746046 46776988 + protein_coding KNOWN OTTHUMG00000183177.1 30943 5081 109 ENSG00000105281.11 SLC1A5 chr19 46774883 46788594 - protein_coding KNOWN OTTHUMG00000183434.1 13712 3332 40 ENSG00000275719.1 CTB-147N14.6 chr19 46787815 46789043 + antisense NOVEL OTTHUMG00000186769.1 1229 1229 2 ENSG00000280050.1 AC008622.1 chr19 46792971 46793189 - protein_coding KNOWN NA 219 48 2 ENSG00000275862.1 CTB-147N14.7 chr19 46809583 46810182 + processed_pseudogene KNOWN OTTHUMG00000188023.1 600 600 1 ENSG00000269576.1 HNRNPMP2 chr19 46809585 46810183 + processed_pseudogene KNOWN OTTHUMG00000183435.1 599 599 1 ENSG00000269014.1 CTB-147N14.4 chr19 46826895 46828440 - processed_pseudogene KNOWN OTTHUMG00000183436.1 1546 284 2 ENSG00000042753.10 AP2S1 chr19 46838136 46850992 - protein_coding KNOWN OTTHUMG00000183437.1 12857 1704 39 ENSG00000160007.16 ARHGAP35 chr19 46918676 47005077 + protein_coding KNOWN OTTHUMG00000183438.1 86402 11245 25 ENSG00000279948.1 CTD-2233K9.1 chr19 46946535 46949156 + TEC KNOWN OTTHUMG00000183439.1 2622 2622 1 ENSG00000143653.9 SCCPDH chr1 246724047 246768137 + protein_coding KNOWN OTTHUMG00000040221.2 44091 2503 12 ENSG00000130751.8 NPAS1 chr19 47019820 47045775 + protein_coding KNOWN OTTHUMG00000183440.1 25956 2582 59 ENSG00000130748.6 TMEM160 chr19 47045907 47048630 - protein_coding KNOWN OTTHUMG00000183441.1 2724 663 3 ENSG00000130749.8 ZC3H4 chr19 47064187 47113752 - protein_coding KNOWN OTTHUMG00000183442.1 49566 6502 37 ENSG00000142230.10 SAE1 chr19 47113274 47210636 + protein_coding KNOWN OTTHUMG00000183464.2 97363 3396 77 ENSG00000105327.14 BBC3 chr19 47220822 47232766 - protein_coding KNOWN OTTHUMG00000183489.2 11945 3180 16 ENSG00000265134.1 MIR3190 chr19 47226942 47227021 + miRNA KNOWN NA 80 80 1 ENSG00000105321.11 CCDC9 chr19 47255980 47271953 + protein_coding KNOWN OTTHUMG00000183503.1 15974 3407 29 ENSG00000257704.3 INAFM1 chr19 47274453 47275707 + protein_coding KNOWN OTTHUMG00000170128.2 1255 1255 1 ENSG00000197405.6 C5AR1 chr19 47290023 47322066 + protein_coding KNOWN OTTHUMG00000183504.1 32044 2951 10 ENSG00000134830.5 C5AR2 chr19 47332147 47347327 + protein_coding KNOWN OTTHUMG00000183505.2 15181 6802 4 ENSG00000228879.1 RP11-439E19.6 chr1 246755511 246755832 - processed_pseudogene KNOWN OTTHUMG00000040518.1 322 322 1 ENSG00000134815.17 DHX34 chr19 47349281 47382704 + protein_coding KNOWN OTTHUMG00000149959.4 33424 5696 39 ENSG00000105419.16 MEIS3 chr19 47403124 47419523 - protein_coding KNOWN OTTHUMG00000172280.2 16400 5122 125 ENSG00000118160.12 SLC8A2 chr19 47428017 47472168 - protein_coding KNOWN OTTHUMG00000183529.2 44152 5546 40 ENSG00000118162.12 KPTN chr19 47475144 47484268 - protein_coding KNOWN OTTHUMG00000183443.3 9125 2124 70 ENSG00000268061.4 NAPA-AS1 chr19 47484282 47501597 + antisense KNOWN OTTHUMG00000183420.2 17316 1894 7 ENSG00000105402.6 NAPA chr19 47487637 47515240 - protein_coding KNOWN OTTHUMG00000183294.2 27604 5839 132 ENSG00000279861.1 RP11-43N16.4 chr19 47487638 47489519 - TEC KNOWN OTTHUMG00000183421.1 1882 1882 1 ENSG00000118156.11 ZNF541 chr19 47520685 47555856 - protein_coding KNOWN OTTHUMG00000141262.2 35172 4655 54 ENSG00000276588.1 Metazoa_SRP chr19 47581023 47581321 + misc_RNA NOVEL NA 299 299 1 ENSG00000281476.1 AC010331.1 chr19 47581231 47581313 + miRNA NOVEL NA 83 83 1 ENSG00000223519.6 KIF28P chr1 246771837 246830059 - unitary_pseudogene KNOWN OTTHUMG00000153447.3 58223 3511 37 ENSG00000268746.1 CTD-2571L23.8 chr19 47607524 47733098 + lincRNA NOVEL OTTHUMG00000183262.1 125575 344 3 ENSG00000277383.1 CTD-3001H11.2 chr19 47607873 47608454 - antisense NOVEL OTTHUMG00000186770.1 582 582 1 ENSG00000063169.9 GLTSCR1 chr19 47608196 47703277 + protein_coding KNOWN OTTHUMG00000183263.2 95082 7507 33 ENSG00000269806.1 CTD-3001H11.1 chr19 47615699 47626395 - antisense NOVEL OTTHUMG00000183264.1 10697 547 2 ENSG00000278999.1 AC008985.1 chr19 47661657 47663895 - TEC KNOWN OTTHUMG00000183265.1 2239 2239 1 ENSG00000024422.10 EHD2 chr19 47713343 47743134 + protein_coding KNOWN OTTHUMG00000183266.1 29792 3923 19 ENSG00000105373.17 GLTSCR2 chr19 47745522 47757058 + protein_coding KNOWN OTTHUMG00000183059.1 11537 5341 84 ENSG00000221803.1 SNORD23 chr19 47755853 47755962 + snoRNA KNOWN NA 110 110 1 ENSG00000269656.1 CTD-2571L23.6 chr19 47757036 47768840 - antisense NOVEL OTTHUMG00000183060.1 11805 540 3 ENSG00000178980.13 SEPW1 chr19 47778572 47784686 + protein_coding KNOWN OTTHUMG00000183061.2 6115 5261 69 ENSG00000260855.1 RP11-439E19.10 chr1 246772301 246775772 + antisense NOVEL OTTHUMG00000176476.1 3472 3472 1 ENSG00000213035.4 RPL23AP80 chr19 47794467 47794890 - processed_pseudogene KNOWN OTTHUMG00000158216.2 424 424 1 ENSG00000271150.1 CTD-2571L23.9 chr19 47794650 47794920 + processed_pseudogene KNOWN OTTHUMG00000185249.1 271 271 1 ENSG00000178928.7 TPRX1 chr19 47801243 47819051 - protein_coding KNOWN OTTHUMG00000170628.1 17809 2075 9 ENSG00000105392.14 CRX chr19 47819779 47843330 + protein_coding KNOWN OTTHUMG00000170610.9 23552 5991 20 ENSG00000259009.4 TPRX2P chr19 47860113 47861512 + unprocessed_pseudogene KNOWN OTTHUMG00000171165.4 1400 881 2 ENSG00000259108.2 CTD-3098H1.2 chr19 47863483 47865341 - lincRNA NOVEL OTTHUMG00000170611.2 1859 710 4 ENSG00000105398.3 SULT2A1 chr19 47870466 47886397 - protein_coding KNOWN OTTHUMG00000162469.2 15932 1987 6 ENSG00000221072.1 AC124853.1 chr19 47898733 47898816 - miRNA NOVEL NA 84 84 1 ENSG00000188334.3 BSPH1 chr19 47968046 47992170 - protein_coding KNOWN OTTHUMG00000183137.1 24125 654 6 ENSG00000169393.7 ELSPBP1 chr19 47994651 48025153 + protein_coding KNOWN OTTHUMG00000183138.1 30503 1124 30 ENSG00000227953.5 LINC01341 chr1 246776013 246792385 + processed_transcript NOVEL OTTHUMG00000040519.2 16373 3984 18 ENSG00000105507.2 CABP5 chr19 48029953 48044053 - protein_coding KNOWN OTTHUMG00000183139.1 14101 1501 8 ENSG00000105499.12 PLA2G4C chr19 48047843 48110817 - protein_coding KNOWN OTTHUMG00000183185.1 62975 6613 143 ENSG00000221595.1 AC010458.1 chr19 48051424 48051509 - miRNA NOVEL NA 86 86 1 ENSG00000269420.4 CTD-2265M8.2 chr19 48061371 48064945 + antisense NOVEL OTTHUMG00000183186.1 3575 873 11 ENSG00000105486.12 LIG1 chr19 48115445 48170603 - protein_coding KNOWN OTTHUMG00000183187.1 55159 6576 260 ENSG00000269534.4 CTC-453G23.5 chr19 48118432 48127706 + antisense NOVEL OTTHUMG00000183188.1 9275 1009 7 ENSG00000269321.1 CTC-453G23.4 chr19 48145908 48147413 + antisense NOVEL OTTHUMG00000183189.1 1506 359 2 ENSG00000185453.11 C19orf68 chr19 48170692 48197620 + protein_coding KNOWN OTTHUMG00000183190.1 26929 3751 11 ENSG00000178150.7 ZNF114 chr19 48172318 48287608 + protein_coding KNOWN OTTHUMG00000183191.1 115291 3087 39 ENSG00000105483.15 CARD8 chr19 48180770 48255946 - protein_coding KNOWN OTTHUMG00000165047.6 75177 12927 244 ENSG00000235386.1 RP11-397A15.4 chr1 246818076 246818180 + unprocessed_pseudogene KNOWN OTTHUMG00000040520.2 105 105 1 ENSG00000280353.1 CTC-453G23.7 chr19 48198107 48199720 - TEC KNOWN OTTHUMG00000183192.1 1614 1614 1 ENSG00000268583.1 CTC-453G23.8 chr19 48204083 48213154 + antisense NOVEL OTTHUMG00000183193.1 9072 566 3 ENSG00000268001.1 CARD8-AS1 chr19 48255675 48258199 + antisense NOVEL OTTHUMG00000183194.1 2525 1969 2 ENSG00000268186.1 CTC-241F20.4 chr19 48262900 48271283 - lincRNA NOVEL OTTHUMG00000183195.1 8384 437 3 ENSG00000105479.14 CCDC114 chr19 48296457 48321894 - protein_coding KNOWN OTTHUMG00000156161.2 25438 4299 46 ENSG00000142227.9 EMP3 chr19 48321509 48330553 + protein_coding KNOWN OTTHUMG00000183196.1 9045 1667 37 ENSG00000161558.9 TMEM143 chr19 48332356 48364237 - protein_coding KNOWN OTTHUMG00000183197.2 31882 3701 59 ENSG00000105467.7 SYNGR4 chr19 48364395 48376376 + protein_coding KNOWN OTTHUMG00000183214.1 11982 1240 15 ENSG00000105438.7 KDELR1 chr19 48382570 48391553 - protein_coding KNOWN OTTHUMG00000183215.1 8984 2251 19 ENSG00000105464.3 GRIN2D chr19 48394875 48444931 + protein_coding KNOWN OTTHUMG00000183304.1 50057 5093 13 ENSG00000252011.1 SNORA25 chr1 246833448 246833529 - snoRNA NOVEL NA 82 82 1 ENSG00000105447.11 GRWD1 chr19 48445773 48457022 + protein_coding KNOWN OTTHUMG00000183305.1 11250 5763 15 ENSG00000182324.6 KCNJ14 chr19 48455509 48466980 + protein_coding KNOWN OTTHUMG00000183307.2 11472 4340 5 ENSG00000268530.4 CTC-273B12.5 chr19 48465593 48469693 - antisense NOVEL OTTHUMG00000183308.1 4101 1398 11 ENSG00000268465.1 CTC-273B12.7 chr19 48465837 48472431 + protein_coding PUTATIVE OTTHUMG00000183309.1 6595 443 4 ENSG00000105443.12 CYTH2 chr19 48469032 48482314 + protein_coding KNOWN OTTHUMG00000150245.5 13283 9509 84 ENSG00000142235.7 LMTK3 chr19 48485271 48513189 - protein_coding KNOWN OTTHUMG00000183312.1 27919 5163 31 ENSG00000269814.1 CTC-273B12.10 chr19 48513207 48513660 - lincRNA NOVEL OTTHUMG00000183313.1 454 454 1 ENSG00000088002.10 SULT2B1 chr19 48552075 48599425 + protein_coding KNOWN OTTHUMG00000183314.1 47351 2822 20 ENSG00000105523.3 FAM83E chr19 48600810 48614854 - protein_coding KNOWN OTTHUMG00000183315.1 14045 2529 13 ENSG00000177202.2 SPACA4 chr19 48606743 48607714 + protein_coding KNOWN OTTHUMG00000183316.1 972 972 1 ENSG00000153207.13 AHCTF1 chr1 246839098 246931978 - protein_coding KNOWN OTTHUMG00000040706.2 92881 9609 118 ENSG00000063177.11 RPL18 chr19 48615328 48619536 - protein_coding KNOWN OTTHUMG00000169760.3 4209 4209 77 ENSG00000268093.1 AC022154.7 chr19 48619272 48624132 - antisense NOVEL OTTHUMG00000183317.1 4861 1330 8 ENSG00000063176.14 SPHK2 chr19 48619291 48630717 + protein_coding KNOWN OTTHUMG00000183318.1 11427 6009 63 ENSG00000105516.9 DBP chr19 48630030 48637438 - protein_coding KNOWN OTTHUMG00000183319.1 7409 6544 15 ENSG00000063180.7 CA11 chr19 48637942 48646312 - protein_coding KNOWN OTTHUMG00000183320.1 8371 2075 17 ENSG00000232871.7 SEC1P chr19 48638071 48682245 + unitary_pseudogene KNOWN OTTHUMG00000154617.2 44175 2634 12 ENSG00000142233.10 NTN5 chr19 48661407 48673081 - protein_coding KNOWN OTTHUMG00000183321.1 11675 3115 18 ENSG00000176920.11 FUT2 chr19 48695971 48705950 + protein_coding KNOWN OTTHUMG00000164427.3 9980 3380 9 ENSG00000176909.10 MAMSTR chr19 48712742 48719721 - protein_coding KNOWN OTTHUMG00000183322.1 6980 2265 34 ENSG00000105538.7 RASIP1 chr19 48720587 48740721 - protein_coding KNOWN OTTHUMG00000183323.1 20135 4149 37 ENSG00000135747.10 ZNF670 chr1 246945547 247078811 - protein_coding NOVEL OTTHUMG00000187277.1 133265 3197 13 ENSG00000182264.7 IZUMO1 chr19 48740852 48746909 - protein_coding KNOWN OTTHUMG00000183324.1 6058 3415 36 ENSG00000174951.9 FUT1 chr19 48748011 48755390 - protein_coding KNOWN OTTHUMG00000183325.1 7380 4343 16 ENSG00000105550.7 FGF21 chr19 48755559 48758330 + protein_coding KNOWN OTTHUMG00000183326.1 2772 1312 7 ENSG00000206758.1 RNU6-317P chr19 48793152 48793258 - snRNA KNOWN NA 107 107 1 ENSG00000105552.13 BCAT2 chr19 48795062 48811029 - protein_coding KNOWN OTTHUMG00000183327.2 15968 4553 92 ENSG00000087076.7 HSD17B14 chr19 48813017 48836678 - protein_coding KNOWN OTTHUMG00000183328.1 23662 1281 28 ENSG00000105559.10 PLEKHA4 chr19 48837097 48868632 - protein_coding KNOWN OTTHUMG00000183329.2 31536 3851 76 ENSG00000087074.7 PPP1R15A chr19 48872392 48876057 + protein_coding KNOWN OTTHUMG00000183330.2 3666 3093 4 ENSG00000104804.6 TULP2 chr19 48880965 48898733 - protein_coding KNOWN OTTHUMG00000164406.1 17769 2240 37 ENSG00000104805.14 NUCB1 chr19 48900050 48923372 + protein_coding KNOWN OTTHUMG00000152514.3 23323 3937 75 ENSG00000275503.1 RP11-5P18.11 chr1 15989140 15989375 - processed_pseudogene KNOWN OTTHUMG00000187521.1 236 236 1 ENSG00000197472.13 ZNF695 chr1 246945547 247008093 - protein_coding KNOWN OTTHUMG00000040707.6 62547 3756 31 ENSG00000235191.1 NUCB1-AS1 chr19 48910930 48918891 - antisense NOVEL OTTHUMG00000152526.1 7962 433 2 ENSG00000260366.1 CTD-2639E6.4 chr19 48926171 48926444 + sense_overlapping NOVEL OTTHUMG00000175774.1 274 274 1 ENSG00000104808.6 DHDH chr19 48933682 48944969 + protein_coding KNOWN OTTHUMG00000165029.1 11288 1081 22 ENSG00000087088.18 BAX chr19 48954815 48961798 + protein_coding KNOWN OTTHUMG00000160476.2 6984 2587 60 ENSG00000267898.1 CTD-2639E6.9 chr19 48963975 48965158 + lincRNA NOVEL OTTHUMG00000183331.1 1184 946 4 ENSG00000087086.12 FTL chr19 48965301 48966878 + protein_coding KNOWN OTTHUMG00000183332.1 1578 878 9 ENSG00000281206.1 AC026803.1 chr19 48966694 48966775 - miRNA NOVEL NA 82 82 1 ENSG00000104812.13 GYS1 chr19 48968125 48993310 - protein_coding KNOWN OTTHUMG00000150723.4 25186 4246 48 ENSG00000183207.11 RUVBL2 chr19 48993448 49015995 + protein_coding KNOWN OTTHUMG00000183333.1 22548 3658 114 ENSG00000273898.1 MIR6798 chr19 49009906 49009972 + miRNA KNOWN NA 67 67 1 ENSG00000236775.1 RP11-551G24.3 chr1 247015068 247017291 + processed_pseudogene KNOWN OTTHUMG00000040998.1 2224 1256 2 ENSG00000104826.10 LHB chr19 49015980 49017090 - protein_coding KNOWN OTTHUMG00000183334.1 1111 523 7 ENSG00000268655.1 CTB-60B18.10 chr19 49018247 49019484 - lincRNA NOVEL OTTHUMG00000183335.1 1238 493 3 ENSG00000104827.12 CGB chr19 49022869 49024333 - protein_coding KNOWN OTTHUMG00000180605.2 1465 877 3 ENSG00000267335.2 CTB-60B18.6 chr19 49022953 49036895 - protein_coding PUTATIVE OTTHUMG00000180606.3 13943 786 6 ENSG00000267019.1 NTF6A chr19 49025461 49026020 - unprocessed_pseudogene KNOWN OTTHUMG00000180607.1 560 560 1 ENSG00000267099.1 NTF6G chr19 49029726 49030341 + unprocessed_pseudogene KNOWN OTTHUMG00000180608.1 616 616 1 ENSG00000104818.14 CGB2 chr19 49031912 49033238 + protein_coding KNOWN OTTHUMG00000150185.2 1327 859 6 ENSG00000267631.4 CGB1 chr19 49035610 49036895 - protein_coding KNOWN OTTHUMG00000150186.5 1286 829 6 ENSG00000267685.2 NTF6B chr19 49038479 49039038 - unprocessed_pseudogene KNOWN OTTHUMG00000180623.2 560 560 1 ENSG00000268669.1 CTB-60B18.17 chr19 49042174 49042731 + unprocessed_pseudogene KNOWN OTTHUMG00000183336.1 558 558 1 ENSG00000277462.1 ZNF670 chr1 247036784 247078755 - protein_coding KNOWN OTTHUMG00000040868.3 41972 1994 4 ENSG00000189052.6 CGB5 chr19 49043884 49045311 + protein_coding KNOWN OTTHUMG00000183337.1 1428 841 3 ENSG00000213030.5 CGB8 chr19 49047638 49049106 - protein_coding KNOWN OTTHUMG00000180609.1 1469 882 3 ENSG00000269706.1 CTB-60B18.15 chr19 49050217 49050846 - unprocessed_pseudogene KNOWN OTTHUMG00000183338.1 630 630 1 ENSG00000196337.9 CGB7 chr19 49054275 49058860 - protein_coding KNOWN OTTHUMG00000183339.1 4586 3386 19 ENSG00000225950.6 NTF4 chr19 49055793 49065076 - protein_coding KNOWN OTTHUMG00000183340.1 9284 2734 14 ENSG00000268108.1 CTB-60B18.12 chr19 49060613 49061132 + antisense NOVEL OTTHUMG00000183341.1 520 520 1 ENSG00000268287.1 CTB-60B18.18 chr19 49064259 49064856 + lincRNA NOVEL OTTHUMG00000183342.1 598 598 1 ENSG00000104848.1 KCNA7 chr19 49067418 49072941 - protein_coding KNOWN OTTHUMG00000183343.1 5524 4372 2 ENSG00000265675.2 RN7SL708P chr19 49081332 49081630 + misc_RNA KNOWN NA 299 299 1 ENSG00000104852.13 SNRNP70 chr19 49085419 49108605 + protein_coding KNOWN OTTHUMG00000183344.1 23187 4684 78 ENSG00000215796.3 RP11-551G24.2 chr1 247042791 247044021 + processed_pseudogene KNOWN OTTHUMG00000040997.1 1231 1231 1 ENSG00000104863.10 LIN7B chr19 49114324 49118460 + protein_coding KNOWN OTTHUMG00000134288.3 4137 1753 30 ENSG00000221916.3 C19orf73 chr19 49118397 49119140 - protein_coding KNOWN OTTHUMG00000183345.1 744 744 1 ENSG00000177380.12 PPFIA3 chr19 49119389 49151026 + protein_coding KNOWN OTTHUMG00000183213.1 31638 6451 155 ENSG00000130528.10 HRC chr19 49151198 49155424 - protein_coding KNOWN OTTHUMG00000183203.1 4227 2685 17 ENSG00000130529.14 TRPM4 chr19 49157741 49211836 + protein_coding KNOWN OTTHUMG00000183184.5 54096 6604 175 ENSG00000269009.1 SLC6A21P chr19 49255472 49256102 - processed_pseudogene KNOWN OTTHUMG00000183204.1 631 369 3 ENSG00000265023.1 AC011450.1 chr19 49266483 49266568 + miRNA NOVEL NA 86 86 1 ENSG00000235555.1 SUMO1P4 chr19 49275119 49275420 + processed_pseudogene KNOWN OTTHUMG00000154914.1 302 302 1 ENSG00000063127.14 SLC6A16 chr19 49289638 49325225 - protein_coding KNOWN OTTHUMG00000183179.2 35588 3599 42 ENSG00000265407.1 MIR4324 chr19 49308797 49308868 - miRNA KNOWN NA 72 72 1 ENSG00000228982.1 RP11-107G24.3 chr1 247085389 247086067 - unprocessed_pseudogene KNOWN OTTHUMG00000041114.1 679 321 2 ENSG00000197813.5 CTC-301O7.4 chr19 49331617 49340303 - lincRNA NOVEL OTTHUMG00000184009.1 8687 615 6 ENSG00000104894.10 CD37 chr19 49335171 49343335 + protein_coding KNOWN OTTHUMG00000183183.1 8165 4161 88 ENSG00000074219.12 TEAD2 chr19 49340595 49362457 - protein_coding KNOWN OTTHUMG00000183174.2 21863 2980 95 ENSG00000268157.1 AC010524.4 chr19 49356152 49357769 + antisense NOVEL OTTHUMG00000183178.1 1618 494 2 ENSG00000104901.5 DKKL1 chr19 49361783 49375116 + protein_coding KNOWN OTTHUMG00000183171.2 13334 1461 23 ENSG00000268686.1 AC010524.2 chr19 49368705 49388081 - antisense NOVEL OTTHUMG00000183172.1 19377 3263 3 ENSG00000161609.8 CCDC155 chr19 49388218 49417994 + protein_coding KNOWN OTTHUMG00000183170.3 29777 5624 108 ENSG00000142538.1 PTH2 chr19 49422414 49423441 - protein_coding KNOWN OTTHUMG00000183165.1 1028 459 2 ENSG00000261949.4 GFY chr19 49423749 49428818 + protein_coding PUTATIVE OTTHUMG00000177824.1 5070 1876 8 ENSG00000104888.8 SLC17A7 chr19 49429401 49442360 - protein_coding KNOWN OTTHUMG00000183166.3 12960 6013 45 ENSG00000188295.13 ZNF669 chr1 247099962 247104372 - protein_coding KNOWN OTTHUMG00000040869.5 4411 1980 18 ENSG00000104872.9 PIH1D1 chr19 49446298 49453497 - protein_coding KNOWN OTTHUMG00000183167.2 7200 3331 133 ENSG00000161618.8 ALDH16A1 chr19 49453169 49471048 + protein_coding KNOWN OTTHUMG00000183163.2 17880 4643 89 ENSG00000269469.1 CTD-3148I10.9 chr19 49462752 49486231 + protein_coding NOVEL OTTHUMG00000183164.1 23480 675 6 ENSG00000090554.11 FLT3LG chr19 49474207 49486231 + protein_coding KNOWN OTTHUMG00000186490.1 12025 2846 87 ENSG00000273189.1 CTD-3148I10.15 chr19 49474586 49487637 + processed_transcript NOVEL OTTHUMG00000183157.2 13052 1421 8 ENSG00000142541.15 RPL13A chr19 49487554 49492308 + protein_coding KNOWN OTTHUMG00000134289.4 4755 2369 78 ENSG00000201675.1 SNORD32A chr19 49489965 49490048 + snoRNA KNOWN NA 84 84 1 ENSG00000199631.1 SNORD33 chr19 49490615 49490699 + snoRNA KNOWN NA 85 85 1 ENSG00000202503.1 SNORD34 chr19 49490904 49490974 + snoRNA KNOWN NA 71 71 1 ENSG00000200259.1 SNORD35A chr19 49491175 49491260 + snoRNA KNOWN NA 86 86 1 ENSG00000221953.5 C1orf229 chr1 247110160 247112417 - lincRNA KNOWN OTTHUMG00000165196.2 2258 2258 1 ENSG00000142534.5 RPS11 chr19 49496365 49499689 + protein_coding KNOWN OTTHUMG00000183156.3 3325 1390 38 ENSG00000200530.1 SNORD35B chr19 49497720 49497806 + snoRNA KNOWN NA 87 87 1 ENSG00000207782.2 MIR150 chr19 49500762 49500873 - miRNA KNOWN NA 112 112 1 ENSG00000268681.1 COX6CP7 chr19 49502432 49502639 - processed_pseudogene KNOWN OTTHUMG00000183168.1 208 208 1 ENSG00000104870.11 FCGRT chr19 49506816 49526333 + protein_coding KNOWN OTTHUMG00000183155.2 19518 4173 77 ENSG00000142552.6 RCN3 chr19 49527618 49546962 + protein_coding KNOWN OTTHUMG00000183154.1 19345 2093 19 ENSG00000142546.12 NOSIP chr19 49555711 49590262 - protein_coding KNOWN OTTHUMG00000183169.2 34552 4248 94 ENSG00000207073.1 Y_RNA chr19 49566672 49566772 + misc_RNA NOVEL NA 101 101 1 ENSG00000126460.9 PRRG2 chr19 49580646 49591015 + protein_coding KNOWN OTTHUMG00000183153.1 10370 1701 28 ENSG00000126464.12 PRR12 chr19 49591643 49626439 + protein_coding KNOWN OTTHUMG00000183275.2 34797 7093 28 ENSG00000226164.2 FGFR3P6 chr1 247119669 247120278 + processed_pseudogene KNOWN OTTHUMG00000041166.2 610 610 1 ENSG00000268636.1 CTB-33G10.11 chr19 49625994 49626439 - antisense NOVEL OTTHUMG00000183276.1 446 360 2 ENSG00000126458.3 RRAS chr19 49635292 49640201 - protein_coding KNOWN OTTHUMG00000183247.1 4910 1160 10 ENSG00000126461.13 SCAF1 chr19 49642125 49658642 + protein_coding KNOWN OTTHUMG00000183238.1 16518 4548 26 ENSG00000126456.14 IRF3 chr19 49659569 49665875 - protein_coding KNOWN OTTHUMG00000183287.1 6307 3794 166 ENSG00000126453.8 BCL2L12 chr19 49665142 49673916 + protein_coding KNOWN OTTHUMG00000183239.2 8775 2216 66 ENSG00000126457.19 PRMT1 chr19 49675786 49689029 + protein_coding KNOWN OTTHUMG00000167568.1 13244 4796 124 ENSG00000274306.1 MIR5088 chr19 49682117 49682195 + miRNA KNOWN NA 79 79 1 ENSG00000224420.3 ADM5 chr19 49688664 49690575 + protein_coding KNOWN OTTHUMG00000183240.1 1912 1718 2 ENSG00000268677.1 CTB-33G10.6 chr19 49688853 49690573 - antisense NOVEL OTTHUMG00000183248.1 1721 427 2 ENSG00000169169.13 CPT1C chr19 49690898 49713731 + protein_coding KNOWN OTTHUMG00000183267.4 22834 5864 210 ENSG00000196418.11 ZNF124 chr1 247121975 247172016 - protein_coding KNOWN OTTHUMG00000041112.3 50042 4517 23 ENSG00000243829.1 CTB-33G10.1 chr19 49719498 49720081 - processed_pseudogene KNOWN OTTHUMG00000158217.1 584 584 1 ENSG00000126467.9 TSKS chr19 49739753 49763330 - protein_coding KNOWN OTTHUMG00000183249.2 23578 2391 19 ENSG00000206599.1 RNU6-841P chr19 49764524 49764630 - snRNA KNOWN NA 107 107 1 ENSG00000196961.11 AP2A1 chr19 49766968 49807113 + protein_coding KNOWN OTTHUMG00000183253.1 40146 8746 90 ENSG00000276270.1 MIR6799 chr19 49791866 49791934 + miRNA KNOWN NA 69 69 1 ENSG00000010361.12 FUZ chr19 49806869 49817376 - protein_coding KNOWN OTTHUMG00000167281.2 10508 2950 116 ENSG00000269194.1 AC006942.4 chr19 49808933 49809738 + antisense NOVEL OTTHUMG00000183160.1 806 520 2 ENSG00000104973.13 MED25 chr19 49818279 49838816 + protein_coding KNOWN OTTHUMG00000183161.2 20538 6120 121 ENSG00000277609.1 MIR6800 chr19 49832018 49832099 + miRNA KNOWN NA 82 82 1 ENSG00000268006.1 PTOV1-AS1 chr19 49838639 49851676 - antisense KNOWN OTTHUMG00000183257.1 13038 4203 7 ENSG00000224014.1 RP11-488L18.6 chr1 247175256 247175525 + processed_pseudogene KNOWN OTTHUMG00000041167.1 270 270 1 ENSG00000104960.14 PTOV1 chr19 49850735 49860744 + protein_coding KNOWN OTTHUMG00000183162.2 10010 5962 158 ENSG00000268047.1 AC018766.6 chr19 49852887 49854967 - antisense NOVEL OTTHUMG00000183258.1 2081 484 3 ENSG00000265954.1 MIR4749 chr19 49854591 49854651 + miRNA KNOWN NA 61 61 1 ENSG00000269352.1 PTOV1-AS2 chr19 49856970 49859289 - antisense NOVEL OTTHUMG00000183259.1 2320 1023 9 ENSG00000267896.1 AC018766.4 chr19 49859882 49860514 - antisense NOVEL OTTHUMG00000183260.1 633 548 2 ENSG00000039650.8 PNKP chr19 49861204 49878351 - protein_coding KNOWN OTTHUMG00000183261.6 17148 4025 195 ENSG00000204673.9 AKT1S1 chr19 49869033 49878459 - protein_coding KNOWN OTTHUMG00000150246.4 9427 5737 35 ENSG00000104946.9 TBC1D17 chr19 49877425 49888749 + protein_coding KNOWN OTTHUMG00000183376.3 11325 4745 108 ENSG00000263462.1 MIR4750 chr19 49888175 49888230 + miRNA KNOWN NA 56 56 1 ENSG00000104951.14 IL4I1 chr19 49889654 49929539 - protein_coding KNOWN OTTHUMG00000183377.1 39886 2563 60 ENSG00000235373.1 RP11-206L10.3 chr1 741813 750016 - lincRNA NOVEL OTTHUMG00000002407.1 8204 4860 2 ENSG00000224966.4 TBC1D3P6 chr1 15989871 15994751 + unprocessed_pseudogene KNOWN OTTHUMG00000009379.1 4881 962 8 ENSG00000215795.2 RP11-488L18.3 chr1 247183813 247185482 - processed_pseudogene KNOWN OTTHUMG00000041113.1 1670 1670 1 ENSG00000213024.9 NUP62 chr19 49906825 49929763 - protein_coding KNOWN OTTHUMG00000183077.2 22939 6020 78 ENSG00000269179.1 CTC-326K19.6 chr19 49909501 49958391 - protein_coding NOVEL OTTHUMG00000183078.1 48891 575 3 ENSG00000169136.7 ATF5 chr19 49928702 49933935 + protein_coding KNOWN OTTHUMG00000183065.3 5234 2954 16 ENSG00000265438.1 MIR4751 chr19 49933064 49933137 + miRNA KNOWN NA 74 74 1 ENSG00000161640.14 SIGLEC11 chr19 49948985 49961172 - protein_coding KNOWN OTTHUMG00000157077.3 12188 3173 24 ENSG00000221125.2 U3 chr19 49949316 49949527 - snoRNA NOVEL NA 212 212 1 ENSG00000161643.11 SIGLEC16 chr19 49969673 49975814 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000183074.1 6142 2510 18 ENSG00000105053.9 VRK3 chr19 49976467 50025946 - protein_coding KNOWN OTTHUMG00000183053.3 49480 9796 207 ENSG00000276729.1 Metazoa_SRP chr19 50019019 50019320 + misc_RNA NOVEL NA 302 302 1 ENSG00000142528.14 ZNF473 chr19 50025714 50053414 + protein_coding KNOWN OTTHUMG00000183054.1 27701 6898 41 ENSG00000259865.1 RP11-488L18.10 chr1 247187281 247188526 - lincRNA NOVEL OTTHUMG00000176477.1 1246 1246 1 ENSG00000269091.4 CTD-2126E3.3 chr19 50043196 50051062 - antisense NOVEL OTTHUMG00000183055.1 7867 711 7 ENSG00000204666.3 FLJ26850 chr19 50050589 50066793 + sense_overlapping NOVEL OTTHUMG00000165525.1 16205 1525 3 ENSG00000269540.1 CTD-2126E3.5 chr19 50058882 50060232 - processed_pseudogene KNOWN OTTHUMG00000183152.1 1351 1351 1 ENSG00000267890.1 CTD-2126E3.4 chr19 50075123 50075902 + lincRNA NOVEL OTTHUMG00000183149.1 780 575 2 ENSG00000161652.11 IZUMO2 chr19 50152548 50163195 - protein_coding KNOWN OTTHUMG00000074063.2 10648 1511 26 ENSG00000105357.14 MYH14 chr19 50188186 50310545 + protein_coding KNOWN OTTHUMG00000183034.2 122360 9905 294 ENSG00000276002.1 Metazoa_SRP chr19 50258443 50258722 + misc_RNA NOVEL NA 280 280 1 ENSG00000267815.1 CTB-191K22.5 chr19 50310022 50310539 - antisense NOVEL OTTHUMG00000183045.1 518 457 2 ENSG00000131398.12 KCNC3 chr19 50311937 50333515 - protein_coding KNOWN OTTHUMG00000044580.3 21579 6277 14 ENSG00000131408.12 NR1H2 chr19 50329653 50382982 + protein_coding KNOWN OTTHUMG00000183036.4 53330 3753 91 ENSG00000227671.4 RP11-488L18.4 chr1 247189851 247210856 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000041115.3 21006 2160 12 ENSG00000131401.10 NAPSB chr19 50333796 50344767 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000166192.3 10972 1915 34 ENSG00000131400.6 NAPSA chr19 50358477 50365830 - protein_coding KNOWN OTTHUMG00000183035.1 7354 3581 30 ENSG00000269392.1 CTB-191K22.6 chr19 50365880 50369331 - antisense NOVEL OTTHUMG00000183150.1 3452 304 2 ENSG00000062822.11 POLD1 chr19 50384204 50418018 + protein_coding KNOWN OTTHUMG00000183037.2 33815 4858 185 ENSG00000142539.9 CTD-2545M3.6 chr19 50415799 50428409 + protein_coding PUTATIVE OTTHUMG00000183038.1 12611 1265 10 ENSG00000269404.5 SPIB chr19 50418938 50431313 + protein_coding KNOWN OTTHUMG00000183039.1 12376 4281 39 ENSG00000086967.9 MYBPC2 chr19 50432903 50466321 + protein_coding KNOWN OTTHUMG00000183040.1 33419 3708 30 ENSG00000142530.9 FAM71E1 chr19 50466785 50476753 - protein_coding KNOWN OTTHUMG00000183041.2 9969 1566 25 ENSG00000281744.1 Clostridiales-1 chr19 50471746 50471907 + sRNA NOVEL NA 162 162 1 ENSG00000161671.15 EMC10 chr19 50476400 50490870 + protein_coding KNOWN OTTHUMG00000183042.3 14471 10748 45 ENSG00000263568.1 MIR3916 chr1 247201967 247202060 - miRNA KNOWN NA 94 94 1 ENSG00000268854.1 CTD-2545M3.2 chr19 50480119 50483351 - antisense NOVEL OTTHUMG00000183043.1 3233 375 2 ENSG00000268518.1 CTD-2545M3.8 chr19 50486810 50487638 - lincRNA NOVEL OTTHUMG00000183047.1 829 626 2 ENSG00000161677.10 JOSD2 chr19 50505998 50511353 - protein_coding KNOWN OTTHUMG00000183062.1 5356 1514 23 ENSG00000204653.8 ASPDH chr19 50511600 50514690 - protein_coding KNOWN OTTHUMG00000183057.1 3091 1653 30 ENSG00000131409.11 LRRC4B chr19 50516892 50568045 - protein_coding KNOWN OTTHUMG00000183063.1 51154 3121 9 ENSG00000268231.1 CTD-2560K21.6 chr19 50555370 50557969 - sense_intronic NOVEL OTTHUMG00000183148.1 2600 813 2 ENSG00000213023.8 SYT3 chr19 50621307 50668394 - protein_coding KNOWN OTTHUMG00000183064.1 47088 3832 52 ENSG00000235034.5 C19orf81 chr19 50649445 50659310 + protein_coding KNOWN OTTHUMG00000154593.4 9866 888 12 ENSG00000161681.14 SHANK1 chr19 50661827 50719450 - protein_coding KNOWN OTTHUMG00000137380.3 57624 7567 89 ENSG00000105472.11 CLEC11A chr19 50723329 50725718 + protein_coding KNOWN OTTHUMG00000182866.1 2390 1469 13 ENSG00000252516.1 RNA5SP82 chr1 247204570 247204661 - rRNA KNOWN NA 92 92 1 ENSG00000269565.1 GPR32P1 chr19 50758382 50759192 + unprocessed_pseudogene KNOWN OTTHUMG00000182880.1 811 811 1 ENSG00000142511.4 GPR32 chr19 50770464 50771732 + protein_coding KNOWN OTTHUMG00000183079.1 1269 1269 1 ENSG00000261341.4 CTD-2568A17.1 chr19 50776141 50786210 - lincRNA NOVEL OTTHUMG00000176604.1 10070 605 7 ENSG00000142513.5 ACPT chr19 50790415 50795224 + protein_coding KNOWN OTTHUMG00000182961.1 4810 1347 11 ENSG00000268375.1 CTD-2568A17.8 chr19 50792685 50793584 - antisense NOVEL OTTHUMG00000182962.1 900 260 2 ENSG00000167747.12 C19orf48 chr19 50797704 50804929 - protein_coding KNOWN OTTHUMG00000182875.2 7226 3256 53 ENSG00000221381.1 SNORD88B chr19 50799032 50799122 - snoRNA KNOWN NA 91 91 1 ENSG00000221241.1 SNORD88A chr19 50799442 50799532 - snoRNA KNOWN NA 91 91 1 ENSG00000220988.1 SNORD88C chr19 50802328 50802418 - snoRNA KNOWN NA 91 91 1 ENSG00000180279.5 MGC45922 chr19 50817681 50818878 + lincRNA NOVEL OTTHUMG00000182877.1 1198 936 5 ENSG00000232347.1 RP11-488L18.8 chr1 247210691 247241823 - lincRNA NOVEL OTTHUMG00000041449.1 31133 706 4 ENSG00000167748.9 KLK1 chr19 50819148 50823787 - protein_coding KNOWN OTTHUMG00000182876.2 4640 2378 18 ENSG00000174562.12 KLK15 chr19 50825289 50837213 - protein_coding KNOWN OTTHUMG00000183116.1 11925 2289 28 ENSG00000267968.1 AC011523.2 chr19 50830530 50851089 + antisense NOVEL OTTHUMG00000183117.1 20560 392 3 ENSG00000142515.13 KLK3 chr19 50854915 50860764 + protein_coding KNOWN OTTHUMG00000182867.5 5850 4639 74 ENSG00000167751.11 KLK2 chr19 50861568 50880567 + protein_coding KNOWN OTTHUMG00000182963.3 19000 6394 80 ENSG00000197588.8 KLKP1 chr19 50882096 50896398 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000183118.1 14303 1912 8 ENSG00000167749.10 KLK4 chr19 50906352 50910738 - protein_coding KNOWN OTTHUMG00000182964.2 4387 1935 29 ENSG00000228674.4 CTB-147C22.3 chr19 50927079 50927571 - processed_pseudogene KNOWN OTTHUMG00000182965.2 493 493 1 ENSG00000167754.11 KLK5 chr19 50943303 50953093 - protein_coding KNOWN OTTHUMG00000183097.4 9791 1653 28 ENSG00000269495.1 CTB-147C22.8 chr19 50950185 50963649 + antisense NOVEL OTTHUMG00000183100.1 13465 959 8 ENSG00000214144.3 RP11-488L18.1 chr1 247229940 247231880 + processed_pseudogene KNOWN OTTHUMG00000040999.2 1941 1941 1 ENSG00000167755.12 KLK6 chr19 50958631 50969673 - protein_coding KNOWN OTTHUMG00000183098.1 11043 1976 44 ENSG00000279676.1 CTB-147C22.6 chr19 50962197 50962781 - TEC KNOWN OTTHUMG00000183099.1 585 585 1 ENSG00000267879.1 CTB-147C22.9 chr19 50968210 51012129 + antisense NOVEL OTTHUMG00000183127.1 43920 536 4 ENSG00000169035.10 KLK7 chr19 50976482 50984099 - protein_coding KNOWN OTTHUMG00000182917.3 7618 2434 28 ENSG00000129455.14 KLK8 chr19 50996007 51002711 - protein_coding KNOWN OTTHUMG00000183086.2 6705 1865 43 ENSG00000269741.4 KLK9 chr19 50996018 51009581 - protein_coding NOVEL OTTHUMG00000183088.1 13564 1933 12 ENSG00000213022.5 KLK9 chr19 51003111 51009634 - protein_coding KNOWN OTTHUMG00000183087.3 6524 840 9 ENSG00000129451.10 KLK10 chr19 51012739 51020175 - protein_coding KNOWN OTTHUMG00000182916.2 7437 3853 29 ENSG00000268739.1 CTC-518B2.12 chr19 51014374 51014734 + antisense NOVEL OTTHUMG00000183145.1 361 240 2 ENSG00000167757.12 KLK11 chr19 51022216 51028039 - protein_coding KNOWN OTTHUMG00000182915.3 5824 3113 55 ENSG00000235818.3 VN1R17P chr1 247236868 247237957 - processed_pseudogene KNOWN OTTHUMG00000041163.1 1090 1090 1 ENSG00000186474.14 KLK12 chr19 51029092 51035230 - protein_coding KNOWN OTTHUMG00000165806.3 6139 1769 41 ENSG00000268906.1 CTC-518B2.9 chr19 51030076 51034335 + antisense NOVEL OTTHUMG00000183128.1 4260 485 2 ENSG00000268390.1 CTC-518B2.10 chr19 51043806 51052077 + lincRNA NOVEL OTTHUMG00000183129.1 8272 443 2 ENSG00000167759.11 KLK13 chr19 51056206 51065114 - protein_coding KNOWN OTTHUMG00000182912.2 8909 2007 43 ENSG00000129437.8 KLK14 chr19 51077495 51084245 - protein_coding KNOWN OTTHUMG00000143721.4 6751 1159 15 ENSG00000142544.6 CTU1 chr19 51097606 51108370 - protein_coding KNOWN OTTHUMG00000182910.1 10765 2087 3 ENSG00000268581.1 SIGLEC18P chr19 51119987 51122965 + unprocessed_pseudogene KNOWN OTTHUMG00000183140.2 2979 909 3 ENSG00000129450.7 SIGLEC9 chr19 51124908 51136651 + protein_coding KNOWN OTTHUMG00000182894.2 11744 2539 18 ENSG00000267990.1 CTD-3187F8.15 chr19 51137970 51138634 + unprocessed_pseudogene KNOWN OTTHUMG00000183528.1 665 421 3 ENSG00000168995.12 SIGLEC7 chr19 51142299 51153526 + protein_coding KNOWN OTTHUMG00000182895.2 11228 2043 23 ENSG00000197617.6 VN1R5 chr1 247256072 247257143 + processed_pseudogene KNOWN OTTHUMG00000041165.14 1072 1072 1 ENSG00000267895.1 SIGLEC19P chr19 51143826 51144196 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000183141.1 371 371 1 ENSG00000269072.1 CTD-3187F8.14 chr19 51152923 51181966 - antisense NOVEL OTTHUMG00000183198.1 29044 1763 5 ENSG00000269681.1 CTD-3187F8.6 chr19 51155288 51155624 - processed_pseudogene KNOWN OTTHUMG00000183125.1 337 337 1 ENSG00000171101.12 SIGLEC17P chr19 51167328 51173524 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000182974.3 6197 2280 25 ENSG00000268336.1 SIGLEC20P chr19 51184905 51190809 + unprocessed_pseudogene KNOWN OTTHUMG00000183130.2 5905 1311 7 ENSG00000268652.1 CTD-3187F8.7 chr19 51194118 51195540 - processed_pseudogene KNOWN OTTHUMG00000183126.1 1423 872 2 ENSG00000269253.1 SIGLEC21P chr19 51198855 51201449 + unprocessed_pseudogene KNOWN OTTHUMG00000183131.1 2595 1010 3 ENSG00000278617.1 MIR8074 chr19 51206929 51207009 - miRNA KNOWN NA 81 81 1 ENSG00000268849.4 SIGLEC22P chr19 51211080 51212088 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000183132.1 1009 744 6 ENSG00000105383.13 CD33 chr19 51225064 51243860 + protein_coding KNOWN OTTHUMG00000182891.2 18797 5975 39 ENSG00000202079.1 Y_RNA chr1 247294835 247294941 + misc_RNA NOVEL NA 107 107 1 ENSG00000179213.12 SIGLECL1 chr19 51246348 51269330 + protein_coding KNOWN OTTHUMG00000182881.2 22983 2351 34 ENSG00000268595.1 CTD-3187F8.2 chr19 51251231 51271179 - antisense NOVEL OTTHUMG00000182882.1 19949 547 3 ENSG00000268318.4 CTD-3187F8.11 chr19 51271266 51281234 + lincRNA NOVEL OTTHUMG00000183133.1 9969 1109 9 ENSG00000269021.1 CTD-3187F8.12 chr19 51280862 51283022 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000183134.2 2161 974 4 ENSG00000142549.9 IGLON5 chr19 51311848 51330354 + protein_coding KNOWN OTTHUMG00000154422.1 18507 2606 8 ENSG00000186806.5 VSIG10L chr19 51331536 51342124 - protein_coding KNOWN OTTHUMG00000182975.1 10589 3771 17 ENSG00000267905.4 CTD-2616J11.16 chr19 51340695 51344117 + antisense NOVEL OTTHUMG00000183146.1 3423 438 9 ENSG00000105379.8 ETFB chr19 51345169 51366418 - protein_coding KNOWN OTTHUMG00000182903.2 21250 6526 21 ENSG00000267984.1 CTD-2616J11.9 chr19 51345169 51353293 + antisense NOVEL OTTHUMG00000182902.1 8125 219 2 ENSG00000269403.1 CTD-2616J11.11 chr19 51350373 51368099 - protein_coding NOVEL OTTHUMG00000182911.2 17727 551 4 ENSG00000183888.4 C1orf64 chr1 16004236 16008807 + protein_coding KNOWN OTTHUMG00000009523.1 4572 3039 2 ENSG00000162714.11 ZNF496 chr1 247297412 247331846 - protein_coding KNOWN OTTHUMG00000041164.3 34435 10531 29 ENSG00000268520.1 CTD-2616J11.10 chr19 51361712 51365544 - sense_intronic NOVEL OTTHUMG00000182904.1 3833 473 2 ENSG00000160318.5 CLDND2 chr19 51367098 51369003 - protein_coding KNOWN OTTHUMG00000182901.1 1906 1156 12 ENSG00000105374.8 NKG7 chr19 51371606 51372715 - protein_coding KNOWN OTTHUMG00000182898.2 1110 935 17 ENSG00000105370.6 LIM2 chr19 51379909 51387960 - protein_coding KNOWN OTTHUMG00000182896.1 8052 988 10 ENSG00000262874.1 C19orf84 chr19 51388289 51390574 - protein_coding KNOWN OTTHUMG00000177322.3 2286 1447 4 ENSG00000268889.1 CTD-2616J11.14 chr19 51394488 51403650 + lincRNA NOVEL OTTHUMG00000183135.1 9163 559 2 ENSG00000268144.1 NIFKP6 chr19 51396755 51403526 - processed_pseudogene KNOWN OTTHUMG00000182966.1 6772 845 2 ENSG00000142512.13 SIGLEC10 chr19 51410021 51417803 - protein_coding KNOWN OTTHUMG00000165521.3 7783 3667 88 ENSG00000254760.1 CTD-2616J11.3 chr19 51414298 51414965 + antisense NOVEL OTTHUMG00000165522.1 668 492 2 ENSG00000255441.1 CTD-2616J11.2 chr19 51415724 51417425 + antisense NOVEL OTTHUMG00000165523.1 1702 1005 5 ENSG00000162711.15 NLRP3 chr1 247416156 247449108 + protein_coding KNOWN OTTHUMG00000040647.3 32953 4757 58 ENSG00000268711.1 CTD-2616J11.15 chr19 51426347 51426668 - unprocessed_pseudogene KNOWN OTTHUMG00000183136.1 322 322 1 ENSG00000269181.1 CTD-3073N11.5 chr19 51442379 51442650 + processed_pseudogene KNOWN OTTHUMG00000183491.1 272 272 1 ENSG00000105366.14 SIGLEC8 chr19 51450847 51458456 - protein_coding KNOWN OTTHUMG00000182776.4 7610 3171 22 ENSG00000268957.1 SIGLEC26P chr19 51468360 51468636 - unprocessed_pseudogene KNOWN OTTHUMG00000185923.1 277 277 1 ENSG00000213822.6 CEACAM18 chr19 51478622 51490952 + protein_coding KNOWN OTTHUMG00000151557.2 12331 1476 6 ENSG00000254521.5 SIGLEC12 chr19 51491357 51501789 - protein_coding KNOWN OTTHUMG00000165524.4 10433 2201 23 ENSG00000268839.1 CTD-3073N11.7 chr19 51505059 51505362 - unprocessed_pseudogene KNOWN OTTHUMG00000183493.1 304 304 1 ENSG00000269580.2 SIGLEC27P chr19 51508573 51509311 + unprocessed_pseudogene KNOWN OTTHUMG00000183494.1 739 545 2 ENSG00000105492.14 SIGLEC6 chr19 51519525 51531856 - protein_coding KNOWN OTTHUMG00000133571.5 12332 2573 55 ENSG00000268777.1 CTD-3073N11.9 chr19 51519731 51520260 + antisense NOVEL OTTHUMG00000183512.1 530 430 2 ENSG00000177535.7 OR2B11 chr1 247451029 247451982 - protein_coding KNOWN OTTHUMG00000040572.1 954 954 1 ENSG00000269130.1 SIGLEC28P chr19 51560122 51560590 - unprocessed_pseudogene KNOWN OTTHUMG00000183513.1 469 329 2 ENSG00000268267.1 SIGLEC29P chr19 51563797 51564910 - unprocessed_pseudogene KNOWN OTTHUMG00000183514.1 1114 1114 1 ENSG00000105497.6 ZNF175 chr19 51571298 51592508 + protein_coding KNOWN OTTHUMG00000167771.4 21211 7396 17 ENSG00000269388.1 AC018755.16 chr19 51594561 51606150 + transcribed_processed_pseudogene KNOWN OTTHUMG00000183496.2 11590 1472 7 ENSG00000267808.1 AC018755.17 chr19 51599289 51600470 + lincRNA NOVEL OTTHUMG00000183497.1 1182 1182 1 ENSG00000105501.10 SIGLEC5 chr19 51611503 51645545 - protein_coding KNOWN OTTHUMG00000165510.6 34043 2784 19 ENSG00000268500.4 SIGLEC5 chr19 51612091 51646889 - protein_coding NOVEL OTTHUMG00000188645.1 34799 2310 18 ENSG00000244071.1 RPL9P33 chr19 51621136 51621701 + processed_pseudogene KNOWN OTTHUMG00000158218.1 566 566 1 ENSG00000273837.1 LLNLR-470E3.1 chr19 51639478 51639931 - sense_intronic NOVEL OTTHUMG00000183498.3 454 454 1 ENSG00000254415.3 SIGLEC14 chr19 51642553 51646801 - protein_coding KNOWN OTTHUMG00000165511.4 4249 2082 12 ENSG00000203664.6 OR2W5 chr1 247491068 247492147 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000040573.3 1080 1080 2 ENSG00000243469.1 RPL7P51 chr19 51648862 51649610 + processed_pseudogene KNOWN OTTHUMG00000158219.1 749 749 1 ENSG00000269959.1 SPACA6P-AS chr19 51685363 51693456 - lincRNA NOVEL OTTHUMG00000183887.1 8094 3962 2 ENSG00000207550.1 MIR99B chr19 51692612 51692681 + miRNA KNOWN NA 70 70 1 ENSG00000198972.2 MIRLET7E chr19 51692773 51692881 + miRNA KNOWN NA 109 109 1 ENSG00000208008.1 MIR125A chr19 51693254 51693339 + miRNA KNOWN NA 86 86 1 ENSG00000182310.11 SPACA6P chr19 51693340 51712387 + processed_transcript NOVEL OTTHUMG00000177373.3 19048 3648 56 ENSG00000105509.9 HAS1 chr19 51713112 51723994 - protein_coding KNOWN OTTHUMG00000183499.3 10883 2241 21 ENSG00000171051.7 FPR1 chr19 51745172 51804110 - protein_coding KNOWN OTTHUMG00000183500.2 58939 2594 10 ENSG00000171049.8 FPR2 chr19 51752026 51770526 + protein_coding KNOWN OTTHUMG00000183501.2 18501 3700 16 ENSG00000187474.4 FPR3 chr19 51795163 51826189 + protein_coding KNOWN OTTHUMG00000183502.2 31027 2772 4 ENSG00000169224.11 GCSAML chr1 247507058 247577690 + protein_coding KNOWN OTTHUMG00000040648.4 70633 4680 64 ENSG00000268316.1 AC006272.2 chr19 51839771 51840945 - lincRNA NOVEL OTTHUMG00000182420.1 1175 552 2 ENSG00000269483.1 AC006272.1 chr19 51839924 51843324 - lincRNA NOVEL OTTHUMG00000182421.1 3401 423 3 ENSG00000161551.11 ZNF577 chr19 51855802 51890950 - protein_coding KNOWN OTTHUMG00000157045.2 35149 6234 78 ENSG00000176024.15 ZNF613 chr19 51879872 51948759 + protein_coding KNOWN OTTHUMG00000182424.3 68888 3889 37 ENSG00000268095.1 ZNF649-AS1 chr19 51888025 51900463 + antisense NOVEL OTTHUMG00000182422.1 12439 579 3 ENSG00000198093.9 ZNF649 chr19 51889224 51905040 - protein_coding KNOWN OTTHUMG00000182423.1 15817 4365 27 ENSG00000269235.1 ZNF350-AS1 chr19 51949134 51981367 + antisense NOVEL OTTHUMG00000182537.1 32234 1018 5 ENSG00000256683.5 ZNF350 chr19 51964343 51986856 - protein_coding KNOWN OTTHUMG00000182538.2 22514 4539 36 ENSG00000197619.12 ZNF615 chr19 51991332 52008230 - protein_coding KNOWN OTTHUMG00000182550.1 16899 4898 80 ENSG00000142556.17 ZNF614 chr19 52012765 52030240 - protein_coding KNOWN OTTHUMG00000182551.1 17476 5813 20 ENSG00000227135.1 GCSAML-AS1 chr1 247524679 247526752 - antisense NOVEL OTTHUMG00000040649.1 2074 1638 2 ENSG00000256087.5 ZNF432 chr19 52031379 52095738 - protein_coding KNOWN OTTHUMG00000182552.2 64360 5985 28 ENSG00000275055.1 CTC-471J1.11 chr19 52049007 52049754 + antisense NOVEL OTTHUMG00000186778.1 748 748 1 ENSG00000260160.1 CTC-471J1.2 chr19 52058490 52063703 - sense_overlapping NOVEL OTTHUMG00000176422.1 5214 675 2 ENSG00000197608.10 ZNF841 chr19 52064466 52095765 - protein_coding KNOWN OTTHUMG00000182558.2 31300 4287 29 ENSG00000270248.1 CTC-471J1.10 chr19 52110318 52110726 - processed_pseudogene KNOWN OTTHUMG00000184982.1 409 409 1 ENSG00000204611.5 ZNF616 chr19 52113091 52139922 - protein_coding KNOWN OTTHUMG00000182566.1 26832 4891 21 ENSG00000267827.4 CTC-471J1.8 chr19 52130548 52171533 - processed_transcript NOVEL OTTHUMG00000182586.1 40986 599 10 ENSG00000268458.1 CTC-471J1.9 chr19 52142626 52144156 + lincRNA NOVEL OTTHUMG00000182587.1 1531 332 2 ENSG00000243680.1 RPL37P23 chr19 52143043 52143336 + processed_pseudogene KNOWN OTTHUMG00000158220.1 294 294 1 ENSG00000196267.11 ZNF836 chr19 52153864 52171643 - protein_coding KNOWN OTTHUMG00000182567.2 17780 4244 22 ENSG00000196242.7 OR2C3 chr1 247530132 247533839 - protein_coding KNOWN OTTHUMG00000040579.2 3708 2815 3 ENSG00000267927.1 CTD-2525I3.2 chr19 52171158 52177002 + antisense NOVEL OTTHUMG00000182588.1 5845 578 2 ENSG00000105568.16 PPP2R1A chr19 52190039 52229533 + protein_coding KNOWN OTTHUMG00000137367.3 39495 7437 71 ENSG00000274380.1 MIR6801 chr19 52222020 52222098 + miRNA KNOWN NA 79 79 1 ENSG00000268015.1 CTD-2525I3.3 chr19 52222225 52231294 - antisense NOVEL OTTHUMG00000182628.1 9070 1121 7 ENSG00000277562.1 CTD-2525I3.8 chr19 52241765 52242440 - processed_pseudogene KNOWN OTTHUMG00000188028.1 676 676 1 ENSG00000207265.1 Y_RNA chr19 52259076 52259187 - misc_RNA NOVEL NA 112 112 1 ENSG00000196214.9 ZNF766 chr19 52269571 52296046 + protein_coding KNOWN OTTHUMG00000182629.3 26476 7335 37 ENSG00000208002.1 MIR643 chr19 52281797 52281893 + miRNA KNOWN NA 97 97 1 ENSG00000269102.1 CTD-2525I3.5 chr19 52284780 52297920 - antisense NOVEL OTTHUMG00000182631.1 13141 447 2 ENSG00000198464.12 ZNF480 chr19 52297177 52325922 + protein_coding KNOWN OTTHUMG00000157507.3 28746 4836 27 ENSG00000236817.4 RP11-978I15.10 chr1 247565639 247640854 - antisense NOVEL OTTHUMG00000040653.1 75216 894 6 ENSG00000269535.1 CTD-2525I3.6 chr19 52300693 52345229 - antisense NOVEL OTTHUMG00000182644.1 44537 1905 7 ENSG00000167554.13 ZNF610 chr19 52336245 52367778 + protein_coding KNOWN OTTHUMG00000182645.2 31534 3546 40 ENSG00000221923.7 ZNF880 chr19 52369917 52385795 + protein_coding KNOWN OTTHUMG00000167972.2 15879 3719 22 ENSG00000269834.4 ZNF528-AS1 chr19 52388842 52397766 - processed_transcript NOVEL OTTHUMG00000182646.1 8925 4160 14 ENSG00000277977.1 CTD-3018O17.5 chr19 52392659 52392755 + unprocessed_pseudogene KNOWN OTTHUMG00000188029.1 97 97 1 ENSG00000167555.12 ZNF528 chr19 52397849 52418412 + protein_coding KNOWN OTTHUMG00000156494.6 20564 8530 57 ENSG00000269776.1 DPPA5P1 chr19 52425863 52426202 - processed_pseudogene KNOWN OTTHUMG00000182671.1 340 340 1 ENSG00000198633.9 ZNF534 chr19 52429187 52452315 + protein_coding KNOWN OTTHUMG00000156493.2 23129 3279 20 ENSG00000258405.8 ZNF578 chr19 52453576 52512154 + protein_coding KNOWN OTTHUMG00000156468.6 58579 7189 21 ENSG00000278543.1 CTD-3018O17.6 chr19 52473336 52475239 - unprocessed_pseudogene KNOWN OTTHUMG00000188030.1 1904 1904 1 ENSG00000177489.1 OR2G2 chr1 247588360 247589313 + protein_coding KNOWN OTTHUMG00000040575.1 954 954 1 ENSG00000269349.1 CTD-3099C6.5 chr19 52511282 52512342 - antisense NOVEL OTTHUMG00000182753.1 1061 880 2 ENSG00000198482.9 ZNF808 chr19 52527652 52564464 + protein_coding KNOWN OTTHUMG00000158230.3 36813 5432 28 ENSG00000167562.10 ZNF701 chr19 52555822 52587174 + protein_coding KNOWN OTTHUMG00000182754.1 31353 6294 28 ENSG00000242255.1 RPL39P34 chr19 52564076 52564231 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000158225.2 156 156 1 ENSG00000268886.1 CTD-3099C6.7 chr19 52575883 52585561 - antisense NOVEL OTTHUMG00000182757.1 9679 640 2 ENSG00000123870.10 ZNF137P chr19 52588505 52597345 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000154335.2 8841 2029 5 ENSG00000167766.17 ZNF83 chr19 52594060 52690496 - protein_coding KNOWN OTTHUMG00000182761.4 96437 8028 87 ENSG00000268970.1 CTD-3099C6.11 chr19 52597699 52598887 - sense_intronic NOVEL OTTHUMG00000182791.1 1189 644 2 ENSG00000269825.1 CTD-3099C6.9 chr19 52650437 52653284 - sense_intronic NOVEL OTTHUMG00000182793.1 2848 2848 1 ENSG00000213020.7 ZNF611 chr19 52702813 52735073 - protein_coding KNOWN OTTHUMG00000154908.3 32261 7148 91 ENSG00000177476.3 OR2G3 chr1 247605586 247606515 + protein_coding KNOWN OTTHUMG00000040576.1 930 930 1 ENSG00000189190.8 ZNF600 chr19 52764195 52818004 - protein_coding KNOWN OTTHUMG00000182686.1 53810 5538 24 ENSG00000198538.9 ZNF28 chr19 52797409 52857600 - protein_coding KNOWN OTTHUMG00000154564.6 60192 5974 27 ENSG00000255875.2 CTD-2102P23.1 chr19 52809824 52810708 + processed_pseudogene KNOWN OTTHUMG00000167868.2 885 885 1 ENSG00000204604.8 ZNF468 chr19 52838008 52857649 - protein_coding KNOWN OTTHUMG00000182687.1 19642 5281 30 ENSG00000268225.1 CTD-2331H12.5 chr19 52861807 52862866 - processed_pseudogene KNOWN OTTHUMG00000182812.1 1060 1060 1 ENSG00000182986.11 ZNF320 chr19 52863790 52897693 - protein_coding KNOWN OTTHUMG00000182797.2 33904 8363 60 ENSG00000213793.4 ZNF888 chr19 52915196 52923470 - lincRNA NOVEL OTTHUMG00000182819.1 8275 551 4 ENSG00000269646.1 CTD-2331H12.7 chr19 52923382 52924075 + lincRNA NOVEL OTTHUMG00000182820.1 694 486 2 ENSG00000213801.4 ZNF816-ZNF321P chr19 52927135 52942601 - transcribed_processed_pseudogene KNOWN OTTHUMG00000167760.2 15467 2341 3 ENSG00000221874.4 ZNF321P chr19 52928475 52962823 - protein_coding KNOWN OTTHUMG00000167759.1 34349 1252 4 ENSG00000233078.1 RP11-5P18.5 chr1 16006160 16006671 - antisense NOVEL OTTHUMG00000009524.1 512 466 2 ENSG00000198452.6 OR14L1P chr1 247619643 247620570 + unprocessed_pseudogene KNOWN OTTHUMG00000040577.2 928 928 1 ENSG00000180257.11 ZNF816 chr19 52949379 52962911 - protein_coding KNOWN OTTHUMG00000167761.2 13533 3310 36 ENSG00000269082.1 CTD-2620I22.1 chr19 52956041 52981654 - processed_transcript NOVEL OTTHUMG00000182823.1 25614 553 4 ENSG00000242779.5 ZNF702P chr19 52968251 53037898 - transcribed_processed_pseudogene KNOWN OTTHUMG00000150515.2 69648 4769 42 ENSG00000268282.1 CTD-2620I22.2 chr19 53004040 53005150 + processed_pseudogene KNOWN OTTHUMG00000182852.1 1111 1111 1 ENSG00000267943.1 CTD-2620I22.3 chr19 53007512 53013180 + lincRNA NOVEL OTTHUMG00000182853.1 5669 4060 2 ENSG00000269526.1 ERVV-1 chr19 53013921 53016122 + protein_coding KNOWN OTTHUMG00000182942.1 2202 2202 1 ENSG00000268964.1 ERVV-2 chr19 53044738 53051076 + protein_coding KNOWN OTTHUMG00000182943.1 6339 2431 2 ENSG00000170949.16 ZNF160 chr19 53066606 53103436 - protein_coding KNOWN OTTHUMG00000182854.2 36831 8511 73 ENSG00000170954.10 ZNF415 chr19 53107879 53133077 - protein_coding KNOWN OTTHUMG00000182865.1 25199 3780 118 ENSG00000197937.11 ZNF347 chr19 53124072 53159075 - protein_coding KNOWN OTTHUMG00000182883.3 35004 9131 32 ENSG00000235749.2 RP11-634B7.4 chr1 247639749 247747062 + antisense NOVEL OTTHUMG00000040651.2 107314 1882 4 ENSG00000197497.9 ZNF665 chr19 53159213 53193386 - protein_coding KNOWN OTTHUMG00000182885.2 34174 7475 19 ENSG00000268842.1 CTD-2245F17.2 chr19 53162428 53163563 + antisense NOVEL OTTHUMG00000182886.1 1136 359 2 ENSG00000269051.4 CTD-2245F17.3 chr19 53197111 53211015 + lincRNA NOVEL OTTHUMG00000182887.1 13905 545 8 ENSG00000269001.1 ZNF818P chr19 53212988 53213396 + processed_pseudogene KNOWN OTTHUMG00000182888.1 409 409 1 ENSG00000267809.1 NDUFV2P1 chr19 53223973 53224879 - processed_pseudogene KNOWN OTTHUMG00000182889.1 907 907 1 ENSG00000197928.9 ZNF677 chr19 53235381 53254898 - protein_coding KNOWN OTTHUMG00000182890.2 19518 9348 42 ENSG00000269288.1 CTD-2245F17.6 chr19 53240675 53241913 + antisense NOVEL OTTHUMG00000182905.1 1239 337 2 ENSG00000196131.6 VN1R2 chr19 53258292 53261837 + protein_coding KNOWN OTTHUMG00000182906.1 3546 1460 3 ENSG00000228567.3 VN1R4 chr19 53266676 53267723 - protein_coding KNOWN OTTHUMG00000182907.1 1048 1048 1 ENSG00000269758.1 CTD-2245F17.9 chr19 53267870 53270932 - lincRNA NOVEL OTTHUMG00000182908.1 3063 507 3 ENSG00000230411.1 OR3D1P chr1 247666887 247667841 + unprocessed_pseudogene KNOWN OTTHUMG00000040200.1 955 955 1 ENSG00000189348.6 FAM90A27P chr19 53281559 53284944 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000182909.1 3386 1381 7 ENSG00000163098.4 BIRC8 chr19 53289601 53291626 - protein_coding KNOWN OTTHUMG00000182919.1 2026 2026 1 ENSG00000269118.1 FAM90A28P chr19 53299051 53308644 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000182944.1 9594 1858 8 ENSG00000174677.4 VN1R6P chr19 53315137 53316043 + unitary_pseudogene KNOWN OTTHUMG00000154497.1 907 907 1 ENSG00000203326.8 ZNF525 chr19 53330675 53392217 + protein_coding KNOWN OTTHUMG00000158277.4 61543 7205 29 ENSG00000213799.9 ZNF845 chr19 53333749 53354869 + protein_coding KNOWN OTTHUMG00000182920.1 21121 4413 13 ENSG00000241069.1 CTD-3141N22.1 chr19 53386233 53386388 + transcribed_processed_pseudogene KNOWN OTTHUMG00000158259.1 156 156 1 ENSG00000196417.11 ZNF765 chr19 53389793 53430413 + protein_coding KNOWN OTTHUMG00000163079.3 40621 12344 40 ENSG00000239912.1 RPL39P36 chr19 53413190 53413345 + processed_pseudogene KNOWN OTTHUMG00000158291.1 156 156 1 ENSG00000249435.1 CTD-2224J9.7 chr19 53426019 53426499 - processed_pseudogene KNOWN OTTHUMG00000163080.1 481 481 1 ENSG00000197437.3 OR13G1 chr1 247672118 247673041 - protein_coding KNOWN OTTHUMG00000040212.1 924 924 1 ENSG00000241015.2 TPM3P9 chr19 53431984 53444670 + transcribed_processed_pseudogene KNOWN OTTHUMG00000157312.3 12687 2920 3 ENSG00000160336.13 ZNF761 chr19 53431993 53458261 + protein_coding KNOWN OTTHUMG00000156999.7 26269 4714 20 ENSG00000198346.9 ZNF813 chr19 53467735 53496255 + protein_coding KNOWN OTTHUMG00000158309.2 28521 6244 12 ENSG00000250731.1 TPM3P6 chr19 53479350 53480091 + processed_pseudogene KNOWN OTTHUMG00000163081.1 742 742 1 ENSG00000241434.1 CTD-2224J9.4 chr19 53495887 53496037 + transcribed_processed_pseudogene KNOWN OTTHUMG00000158303.1 151 151 1 ENSG00000213777.5 CTD-2224J9.8 chr19 53503392 53512687 + transcribed_processed_pseudogene KNOWN OTTHUMG00000163078.2 9296 1423 6 ENSG00000274892.1 CTB-167G5.7 chr19 53512092 53512616 - unprocessed_pseudogene KNOWN OTTHUMG00000188032.1 525 525 1 ENSG00000130844.15 ZNF331 chr19 53520981 53580269 + protein_coding KNOWN OTTHUMG00000163019.2 59289 7728 113 ENSG00000268864.3 CTB-167G5.6 chr19 53599628 53608451 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000183076.2 8824 2047 13 ENSG00000269608.1 CTB-167G5.3 chr19 53616802 53617254 + processed_pseudogene KNOWN OTTHUMG00000183000.1 453 453 1 ENSG00000239395.1 RP11-634B7.5 chr1 247711813 247723764 - processed_transcript NOVEL OTTHUMG00000041416.2 11952 833 6 ENSG00000242668.3 RN7SL317P chr19 53629713 53630041 + misc_RNA KNOWN NA 329 329 1 ENSG00000204595.1 DPRX chr19 53632056 53637009 + protein_coding KNOWN OTTHUMG00000170632.1 4954 648 3 ENSG00000200393.1 RNU6-698P chr19 53653685 53653791 + snRNA KNOWN NA 107 107 1 ENSG00000270347.1 CTC-339O9.2 chr19 53657400 53658462 - unprocessed_pseudogene KNOWN OTTHUMG00000184985.1 1063 729 2 ENSG00000207645.1 MIR512-1 chr19 53666673 53666770 + miRNA KNOWN NA 98 98 1 ENSG00000207644.1 MIR512-2 chr19 53669157 53669254 + miRNA KNOWN NA 98 98 1 ENSG00000221017.1 MIR1323 chr19 53671968 53672040 + miRNA KNOWN NA 73 73 1 ENSG00000207869.1 MIR498 chr19 53674197 53674320 + miRNA KNOWN NA 124 124 1 ENSG00000207599.1 MIR520E chr19 53675711 53675797 + miRNA KNOWN NA 87 87 1 ENSG00000207616.1 MIR515-1 chr19 53679003 53679085 + miRNA KNOWN NA 83 83 1 ENSG00000169214.3 OR6F1 chr1 247711829 247712755 - protein_coding KNOWN OTTHUMG00000040213.1 927 927 1 ENSG00000207810.1 MIR519E chr19 53679940 53680023 + miRNA KNOWN NA 84 84 1 ENSG00000280524.1 MIR520F chr19 53682162 53682260 + miRNA KNOWN NA 99 99 1 ENSG00000207615.2 MIR515-2 chr19 53684995 53685109 + miRNA KNOWN NA 115 115 1 ENSG00000207788.1 MIR519C chr19 53686469 53686555 + miRNA KNOWN NA 87 87 1 ENSG00000221421.1 MIR1283-1 chr19 53688481 53688567 + miRNA KNOWN NA 87 87 1 ENSG00000207594.1 MIR520A chr19 53690881 53690965 + miRNA KNOWN NA 85 85 1 ENSG00000207580.1 MIR526B chr19 53694393 53694475 + miRNA KNOWN NA 83 83 1 ENSG00000207825.1 MIR519B chr19 53695213 53695293 + miRNA KNOWN NA 81 81 1 ENSG00000207711.1 MIR525 chr19 53697533 53697617 + miRNA KNOWN NA 85 85 1 ENSG00000281285.1 AC011453.4 chr19 53698371 53698489 + miRNA NOVEL NA 119 119 1 ENSG00000241128.1 OR14A2 chr1 247723099 247724043 - protein_coding KNOWN OTTHUMG00000040207.1 945 945 1 ENSG00000207706.1 MIR518F chr19 53700015 53700101 + miRNA KNOWN NA 87 87 1 ENSG00000207722.1 MIR520B chr19 53701227 53701287 + miRNA KNOWN NA 61 61 1 ENSG00000207862.1 MIR518B chr19 53702737 53702819 + miRNA KNOWN NA 83 83 1 ENSG00000207629.1 MIR526A1 chr19 53706252 53706336 + miRNA KNOWN NA 85 85 1 ENSG00000207738.1 MIR520C chr19 53707453 53707539 + miRNA KNOWN NA 87 87 1 ENSG00000280867.1 MIR518C chr19 53708731 53708848 + miRNA KNOWN NA 118 118 1 ENSG00000280911.1 MIR524 chr19 53710988 53711093 + miRNA KNOWN NA 106 106 1 ENSG00000207734.1 MIR517A chr19 53712268 53712354 + miRNA KNOWN NA 87 87 1 ENSG00000207981.1 MIR519D chr19 53713347 53713434 + miRNA KNOWN NA 88 88 1 ENSG00000207549.1 MIR521-2 chr19 53716594 53716680 + miRNA KNOWN NA 87 87 1 ENSG00000153230.4 OR14K1 chr1 247738615 247739559 + protein_coding KNOWN OTTHUMG00000040211.1 945 945 1 ENSG00000251843.1 RNU6-803P chr19 53719064 53719165 - snRNA KNOWN NA 102 102 1 ENSG00000207735.1 MIR520D chr19 53720096 53720182 + miRNA KNOWN NA 87 87 1 ENSG00000207837.1 MIR517B chr19 53721076 53721142 + miRNA KNOWN NA 67 67 1 ENSG00000207799.1 MIR520G chr19 53722166 53722255 + miRNA KNOWN NA 90 90 1 ENSG00000207925.1 MIR516B2 chr19 53725442 53725526 + miRNA KNOWN NA 85 85 1 ENSG00000211532.1 MIR526A2 chr19 53726922 53726986 + miRNA KNOWN NA 65 65 1 ENSG00000207987.1 MIR518E chr19 53729838 53729925 + miRNA KNOWN NA 88 88 1 ENSG00000207803.1 MIR518A1 chr19 53731006 53731090 + miRNA KNOWN NA 85 85 1 ENSG00000252734.1 RNU6-980P chr19 53732981 53733083 - snRNA KNOWN NA 103 103 1 ENSG00000281027.1 AC011453.3 chr19 53734863 53734981 + miRNA NOVEL NA 119 119 1 ENSG00000221888.3 OR1C1 chr1 247757462 247758406 - protein_coding KNOWN OTTHUMG00000040198.1 945 945 1 ENSG00000207946.2 MIR516B1 chr19 53736840 53736949 + miRNA KNOWN NA 110 110 1 ENSG00000207699.1 MIR518A2 chr19 53739333 53739419 + miRNA KNOWN NA 87 87 1 ENSG00000207838.1 MIR517C chr19 53741313 53741407 + miRNA KNOWN NA 95 95 1 ENSG00000207861.1 MIR520H chr19 53742512 53742599 + miRNA KNOWN NA 88 88 1 ENSG00000252025.1 RNU6-982P chr19 53745004 53745105 - snRNA KNOWN NA 102 102 1 ENSG00000207634.1 MIR521-1 chr19 53748636 53748722 + miRNA KNOWN NA 87 87 1 ENSG00000252191.1 RNU6-751P chr19 53749851 53749951 - snRNA KNOWN NA 101 101 1 ENSG00000281751.1 MIR522 chr19 53751197 53751303 + miRNA KNOWN NA 107 107 1 ENSG00000207992.1 MIR519A1 chr19 53752397 53752481 + miRNA KNOWN NA 85 85 1 ENSG00000207979.1 MIR527 chr19 53754018 53754102 + miRNA KNOWN NA 85 85 1 ENSG00000228336.1 OR9H1P chr1 247774910 247775836 + unitary_pseudogene KNOWN OTTHUMG00000040209.3 927 927 1 ENSG00000207767.2 MIR516A1 chr19 53756727 53756836 + miRNA KNOWN NA 110 110 1 ENSG00000265569.1 AC011453.1 chr19 53757869 53757969 + miRNA NOVEL NA 101 101 1 ENSG00000221548.1 MIR1283-2 chr19 53758232 53758318 + miRNA KNOWN NA 87 87 1 ENSG00000252063.1 RNU6-1041P chr19 53760087 53760188 - snRNA KNOWN NA 102 102 1 ENSG00000207620.1 MIR516A2 chr19 53761133 53761222 + miRNA KNOWN NA 90 90 1 ENSG00000269842.3 CTC-339O9.1 chr19 53761961 53764199 + lincRNA NOVEL OTTHUMG00000183209.1 2239 2239 1 ENSG00000280835.1 AC011453.2 chr19 53762335 53762445 + miRNA NOVEL NA 111 111 1 ENSG00000252979.1 RNU6-165P chr19 53766534 53766632 - snRNA KNOWN NA 99 99 1 ENSG00000237589.1 HMGN1P32 chr19 53767971 53768553 - processed_pseudogene KNOWN OTTHUMG00000060742.1 583 256 2 ENSG00000229000.1 SEPT7P8 chr19 53772506 53773280 - processed_pseudogene KNOWN OTTHUMG00000060777.1 775 775 1 ENSG00000173641.16 HSPB7 chr1 16014028 16019594 - protein_coding KNOWN OTTHUMG00000009531.2 5567 3910 21 ENSG00000196772.3 OR14A16 chr1 247814800 247815729 - protein_coding KNOWN OTTHUMG00000040199.1 930 930 1 ENSG00000238150.1 AC008753.3 chr19 53775599 53775882 + processed_pseudogene KNOWN OTTHUMG00000060778.1 284 284 1 ENSG00000269877.1 CTD-3022G6.1 chr19 53787597 53788169 - lincRNA NOVEL OTTHUMG00000183210.1 573 446 2 ENSG00000199031.1 MIR371A chr19 53787675 53787741 + miRNA KNOWN NA 67 67 1 ENSG00000199095.1 MIR372 chr19 53787890 53787956 + miRNA KNOWN NA 67 67 1 ENSG00000199143.1 MIR373 chr19 53788705 53788773 + miRNA KNOWN NA 69 69 1 ENSG00000269564.1 AC008753.4 chr19 53788782 53789168 + lincRNA NOVEL OTTHUMG00000060779.1 387 387 1 ENSG00000142405.20 NLRP12 chr19 53793603 53824394 - protein_coding KNOWN OTTHUMG00000060776.3 30792 5088 52 ENSG00000274524.1 AC008753.1 chr19 53831859 53831926 - miRNA NOVEL NA 68 68 1 ENSG00000228323.2 AC008753.6 chr19 53854581 53869107 - antisense NOVEL OTTHUMG00000060780.2 14527 439 4 ENSG00000232324.1 AC008440.10 chr19 53864763 53866140 + lincRNA NOVEL OTTHUMG00000149885.1 1378 555 3 ENSG00000232908.3 HSD17B7P1 chr1 247827486 247828502 + processed_pseudogene KNOWN OTTHUMG00000040197.2 1017 1017 1 ENSG00000179820.14 MYADM chr19 53866223 53876437 + protein_coding KNOWN OTTHUMG00000060775.3 10215 3675 25 ENSG00000232220.2 AC008440.5 chr19 53874626 53876049 - antisense NOVEL OTTHUMG00000060830.2 1424 423 2 ENSG00000126583.9 PRKCG chr19 53879190 53907652 + protein_coding KNOWN OTTHUMG00000064846.7 28463 3381 37 ENSG00000105605.6 CACNG7 chr19 53909335 53943941 + protein_coding KNOWN OTTHUMG00000064852.3 34607 2800 18 ENSG00000142408.2 CACNG8 chr19 53963040 53990215 + protein_coding KNOWN OTTHUMG00000064908.3 27176 8747 4 ENSG00000215998.1 MIR935 chr19 53982307 53982397 + miRNA KNOWN NA 91 91 1 ENSG00000130433.6 CACNG6 chr19 53992288 54012669 + protein_coding KNOWN OTTHUMG00000064907.1 20382 1853 9 ENSG00000276206.1 CTD-3093M3.1 chr19 54031412 54031504 + unprocessed_pseudogene KNOWN OTTHUMG00000188518.1 93 93 1 ENSG00000189068.8 VSTM1 chr19 54040825 54063953 - protein_coding KNOWN OTTHUMG00000064906.6 23129 1111 42 ENSG00000248385.6 TARM1 chr19 54069895 54081365 - protein_coding KNOWN OTTHUMG00000064912.5 11471 1277 10 ENSG00000230576.1 OR6R1P chr1 247833349 247834288 - unprocessed_pseudogene KNOWN OTTHUMG00000040202.1 940 940 1 ENSG00000170909.12 OSCAR chr19 54094668 54102692 - protein_coding KNOWN OTTHUMG00000064966.7 8025 2084 55 ENSG00000170906.14 NDUFA3 chr19 54102728 54109257 + protein_coding KNOWN OTTHUMG00000064972.14 6530 2475 56 ENSG00000105619.12 TFPT chr19 54107013 54115675 - protein_coding KNOWN OTTHUMG00000065906.9 8663 1240 23 ENSG00000105618.12 PRPF31 chr19 54115410 54131719 + protein_coding KNOWN OTTHUMG00000066040.12 16310 2673 85 ENSG00000237017.1 AC012314.8 chr19 54119511 54125343 - antisense NOVEL OTTHUMG00000066041.2 5833 4158 4 ENSG00000088038.16 CNOT3 chr19 54137728 54155681 + protein_coding KNOWN OTTHUMG00000066468.10 17954 6676 103 ENSG00000105617.3 LENG1 chr19 54155161 54159882 - protein_coding KNOWN OTTHUMG00000066486.2 4722 1542 4 ENSG00000167608.10 TMC4 chr19 54160108 54173250 - protein_coding KNOWN OTTHUMG00000066485.28 13143 3062 64 ENSG00000125505.15 MBOAT7 chr19 54173412 54189882 - protein_coding KNOWN OTTHUMG00000066516.9 16471 5292 71 ENSG00000170892.9 TSEN34 chr19 54189938 54194536 + protein_coding KNOWN OTTHUMG00000066515.29 4599 3542 31 ENSG00000197591.3 OR11L1 chr1 247840928 247841896 - protein_coding KNOWN OTTHUMG00000040193.1 969 969 1 ENSG00000223660.1 AC012314.20 chr19 54199454 54199971 - lincRNA NOVEL OTTHUMG00000149883.1 518 410 2 ENSG00000170889.12 RPS9 chr19 54200742 54249003 + protein_coding KNOWN OTTHUMG00000066618.9 48262 4371 59 ENSG00000224579.1 AC012314.19 chr19 54209092 54209418 - unprocessed_pseudogene KNOWN OTTHUMG00000128747.1 327 327 1 ENSG00000204577.10 LILRB3 chr19 54216278 54223506 - protein_coding KNOWN OTTHUMG00000066626.9 7229 3736 75 ENSG00000244482.8 LILRA6 chr19 54216868 54242800 - protein_coding KNOWN OTTHUMG00000066635.7 25933 4088 65 ENSG00000269524.1 CTB-83J4.1 chr19 54224523 54224881 + lincRNA NOVEL OTTHUMG00000183027.2 359 359 1 ENSG00000235081.1 AC010492.2 chr19 54229036 54230213 + processed_pseudogene KNOWN OTTHUMG00000066633.3 1178 901 2 ENSG00000131042.12 LILRB2 chr19 54238904 54281184 - protein_coding KNOWN OTTHUMG00000064896.5 42281 4514 97 ENSG00000249189.1 AC010492.4 chr19 54246101 54247322 - unprocessed_pseudogene KNOWN OTTHUMG00000066634.1 1222 219 3 ENSG00000105609.15 LILRB5 chr19 54249431 54257301 - protein_coding KNOWN OTTHUMG00000066636.6 7871 7017 53 ENSG00000162722.8 TRIM58 chr1 247857199 247878205 + protein_coding KNOWN OTTHUMG00000040203.1 21007 3225 6 ENSG00000212314.2 RNU6-1307P chr19 54263951 54264053 - snRNA KNOWN NA 103 103 1 ENSG00000240296.1 AC010492.5 chr19 54268005 54269045 + processed_pseudogene KNOWN OTTHUMG00000149998.1 1041 649 2 ENSG00000264703.1 MIR4752 chr19 54282109 54282180 + miRNA KNOWN NA 72 72 1 ENSG00000240197.1 AC010518.3 chr19 54294049 54294366 - unprocessed_pseudogene KNOWN OTTHUMG00000149884.1 318 170 2 ENSG00000276758.1 AC010518.2 chr19 54296194 54296252 - unprocessed_pseudogene KNOWN OTTHUMG00000065358.6 59 59 1 ENSG00000251431.1 AC008984.5 chr19 54298105 54298814 - unprocessed_pseudogene KNOWN OTTHUMG00000065810.1 710 356 3 ENSG00000234436.1 AC008984.7 chr19 54301758 54306026 - unprocessed_pseudogene KNOWN OTTHUMG00000132225.1 4269 404 2 ENSG00000187116.12 LILRA5 chr19 54307070 54313139 - protein_coding KNOWN OTTHUMG00000065357.3 6070 1760 24 ENSG00000275210.1 AC008984.2 chr19 54308915 54337168 - processed_transcript NOVEL OTTHUMG00000065356.2 28254 1734 8 ENSG00000249654.1 VN1R104P chr19 54320204 54321212 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000065546.2 1009 1009 1 ENSG00000238243.3 OR2W3 chr1 247895587 247896531 + protein_coding KNOWN OTTHUMG00000040204.1 945 945 1 ENSG00000250507.1 AC008984.6 chr19 54328272 54331434 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000065809.2 3163 1067 5 ENSG00000239961.2 LILRA4 chr19 54333185 54339150 - protein_coding KNOWN OTTHUMG00000065355.4 5966 2171 13 ENSG00000167613.14 LAIR1 chr19 54351384 54370558 - protein_coding KNOWN OTTHUMG00000065545.11 19175 8071 146 ENSG00000237955.1 AC008746.10 chr19 54379489 54379960 + processed_pseudogene KNOWN OTTHUMG00000128473.1 472 472 1 ENSG00000167614.12 TTYH1 chr19 54415219 54436900 + protein_coding KNOWN OTTHUMG00000065544.9 21682 7068 122 ENSG00000227407.1 AC008746.3 chr19 54430654 54434698 - antisense NOVEL OTTHUMG00000065547.1 4045 529 2 ENSG00000268496.1 CTD-2587H19.2 chr19 54434183 54434665 + sense_intronic NOVEL OTTHUMG00000183030.1 483 483 1 ENSG00000269873.1 CTD-2587H19.3 chr19 54438010 54438346 - lincRNA NOVEL OTTHUMG00000183031.1 337 337 1 ENSG00000267838.2 AC008746.12 chr19 54438665 54439544 - lincRNA NOVEL OTTHUMG00000150514.2 880 880 1 ENSG00000226696.4 LENG8-AS1 chr19 54444813 54449045 - antisense NOVEL OTTHUMG00000133686.5 4233 1248 7 ENSG00000177462.6 OR2T8 chr1 247921018 247921956 + protein_coding KNOWN OTTHUMG00000040205.1 939 939 1 ENSG00000235681.1 AC008746.5 chr19 54446830 54447047 + processed_pseudogene KNOWN OTTHUMG00000065702.1 218 218 1 ENSG00000167615.15 LENG8 chr19 54448887 54462037 + protein_coding KNOWN OTTHUMG00000065548.13 13151 6469 80 ENSG00000275183.1 LENG9 chr19 54461796 54463711 - protein_coding KNOWN OTTHUMG00000188273.2 1916 1916 1 ENSG00000167617.2 CDC42EP5 chr19 54465026 54473264 - protein_coding KNOWN OTTHUMG00000065699.1 8239 903 5 ENSG00000167618.8 LAIR2 chr19 54497879 54510687 + protein_coding KNOWN OTTHUMG00000065697.3 12809 1078 14 ENSG00000213016.3 AC008746.9 chr19 54521723 54522031 + unprocessed_pseudogene KNOWN OTTHUMG00000065698.2 309 309 1 ENSG00000104970.9 KIR3DX1 chr19 54532692 54545771 + protein_coding KNOWN OTTHUMG00000065696.6 13080 5125 60 ENSG00000235181.1 AC009892.2 chr19 54551970 54552256 + unprocessed_pseudogene KNOWN OTTHUMG00000065694.1 287 287 1 ENSG00000239998.4 LILRA2 chr19 54572920 54590287 + protein_coding KNOWN OTTHUMG00000065703.5 17368 5349 49 ENSG00000104974.9 LILRA1 chr19 54573879 54602090 + protein_coding KNOWN OTTHUMG00000065701.2 28212 3657 48 ENSG00000177275.3 OR2AJ1 chr1 247933769 247934755 + protein_coding KNOWN OTTHUMG00000040206.1 987 987 1 ENSG00000269271.1 CTB-83J4.2 chr19 54589441 54590287 + lincRNA NOVEL OTTHUMG00000183032.2 847 847 1 ENSG00000238094.1 AC009892.5 chr19 54607870 54608376 + unprocessed_pseudogene KNOWN OTTHUMG00000065704.2 507 319 2 ENSG00000104972.13 LILRB1 chr19 54617158 54700954 + protein_coding KNOWN OTTHUMG00000065695.8 83797 5552 162 ENSG00000264799.1 AC245036.1 chr19 54629392 54629463 - miRNA NOVEL NA 72 72 1 ENSG00000224730.1 AC009892.10 chr19 54635722 54638892 - antisense NOVEL OTTHUMG00000149999.2 3171 554 2 ENSG00000186818.11 LILRB4 chr19 54643889 54670359 + protein_coding KNOWN OTTHUMG00000065879.13 26471 6328 85 ENSG00000277520.1 AC245036.6 chr19 54644707 54644782 + miRNA NOVEL NA 76 76 1 ENSG00000274787.1 AC245036.3 chr19 54644793 54644868 + miRNA NOVEL NA 76 76 1 ENSG00000276748.1 AC245036.5 chr19 54644922 54644997 + miRNA NOVEL NA 76 76 1 ENSG00000275694.1 AC245036.4 chr19 54645008 54645083 + miRNA NOVEL NA 76 76 1 ENSG00000226191.3 CLK3P2 chr1 247936061 247937513 - processed_pseudogene KNOWN OTTHUMG00000040208.2 1453 1453 1 ENSG00000274095.1 AC245036.2 chr19 54645180 54645255 + miRNA NOVEL NA 76 76 1 ENSG00000277636.1 MIR8061 chr19 54645309 54645383 + miRNA KNOWN NA 75 75 1 ENSG00000242856.3 VN1R105P chr19 54647944 54648853 + transcribed_processed_pseudogene KNOWN OTTHUMG00000065711.1 910 910 1 ENSG00000237323.1 AC009892.9 chr19 54652085 54652230 + unprocessed_pseudogene KNOWN OTTHUMG00000065710.1 146 146 1 ENSG00000225370.1 AC011515.2 chr19 54671231 54672591 + unprocessed_pseudogene KNOWN OTTHUMG00000065888.1 1361 579 3 ENSG00000186152.6 LILRP1 chr19 54696604 54700905 + unprocessed_pseudogene KNOWN OTTHUMG00000065881.2 4302 1370 7 ENSG00000228790.1 AC098784.1 chr19 54703952 54704235 + unprocessed_pseudogene KNOWN OTTHUMG00000102121.1 284 284 1 ENSG00000170858.9 LILRP2 chr19 54707916 54713453 + transcribed_processed_pseudogene KNOWN OTTHUMG00000065886.3 5538 2127 13 ENSG00000243772.5 KIR2DL3 chr19 54724459 54767884 + protein_coding KNOWN OTTHUMG00000065887.1 43426 2561 16 ENSG00000242019.1 KIR3DL3 chr19 54724479 54736536 + protein_coding KNOWN OTTHUMG00000065884.2 12058 1691 8 ENSG00000196071.3 OR2L13 chr1 247937191 248100922 + protein_coding KNOWN OTTHUMG00000040446.1 163732 1886 5 ENSG00000215765.3 CTB-61M7.1 chr19 54724496 54798285 + processed_transcript NOVEL OTTHUMG00000065883.2 73790 1294 6 ENSG00000167633.15 KIR3DL1 chr19 54724497 54867215 + protein_coding KNOWN OTTHUMG00000065933.3 142719 2842 52 ENSG00000242473.1 KIR2DP1 chr19 54755023 54767371 + unprocessed_pseudogene KNOWN OTTHUMG00000065882.1 12349 1331 9 ENSG00000125498.18 KIR2DL1 chr19 54769811 54784322 + protein_coding KNOWN OTTHUMG00000065885.3 14512 1674 17 ENSG00000264257.1 KIR3DP1 chr19 54786355 54790318 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000178663.1 3964 628 3 ENSG00000189013.13 KIR2DL4 chr19 54803535 54814517 + protein_coding KNOWN OTTHUMG00000065880.6 10983 1724 60 ENSG00000221957.7 KIR2DS4 chr19 54832676 54848569 + polymorphic_pseudogene KNOWN OTTHUMG00000065932.5 15894 1608 13 ENSG00000240403.4 KIR3DL2 chr19 54850443 54867207 + protein_coding KNOWN OTTHUMG00000065935.1 16765 1877 17 ENSG00000199308.1 RNU6-222P chr19 54868939 54869045 - snRNA KNOWN NA 107 107 1 ENSG00000186431.17 FCAR chr19 54874248 54890472 + protein_coding KNOWN OTTHUMG00000065936.6 16225 2366 55 ENSG00000186510.10 CLCNKA chr1 16018875 16034050 + protein_coding KNOWN OTTHUMG00000009529.3 15176 3476 101 ENSG00000224830.2 OR2X1P chr1 247938973 247939659 + unprocessed_pseudogene KNOWN OTTHUMG00000040210.2 687 687 1 ENSG00000268734.1 CTB-61M7.2 chr19 54890673 54891420 + lincRNA NOVEL OTTHUMG00000183033.1 748 748 1 ENSG00000189430.11 NCR1 chr19 54906150 54916140 + protein_coding KNOWN OTTHUMG00000183212.2 9991 1893 43 ENSG00000167634.11 NLRP7 chr19 54923509 54966312 - protein_coding KNOWN OTTHUMG00000180428.3 42804 3914 74 ENSG00000275012.1 CTC-550B14.10 chr19 54948864 54948993 + processed_pseudogene KNOWN OTTHUMG00000188519.1 130 130 1 ENSG00000022556.14 NLRP2 chr19 54953130 55001142 + protein_coding KNOWN OTTHUMG00000167763.5 48013 6313 149 ENSG00000243494.1 CTC-550B14.1 chr19 54973817 54974417 + processed_pseudogene KNOWN OTTHUMG00000158316.1 601 307 2 ENSG00000280921.1 Metazoa_SRP chr19 55000173 55000440 - misc_RNA NOVEL NA 268 268 1 ENSG00000267265.4 CTC-550B14.7 chr19 55006193 55048086 + antisense NOVEL OTTHUMG00000180476.1 41894 1374 11 ENSG00000088053.10 GP6 chr19 55013705 55038264 - protein_coding KNOWN OTTHUMG00000159709.2 24560 2703 29 ENSG00000267149.2 CTC-550B14.6 chr19 55027593 55053928 - processed_transcript NOVEL OTTHUMG00000180477.2 26336 1271 6 ENSG00000196936.3 OR2L8 chr1 247948858 247949796 + protein_coding KNOWN NA 939 939 1 ENSG00000160439.14 RDH13 chr19 55039108 55071291 - protein_coding KNOWN OTTHUMG00000180478.2 32184 8594 94 ENSG00000131037.13 EPS8L1 chr19 55072020 55087923 + protein_coding KNOWN OTTHUMG00000180513.3 15904 5341 155 ENSG00000125503.11 PPP1R12C chr19 55090913 55117559 - protein_coding KNOWN OTTHUMG00000180540.3 26647 7726 91 ENSG00000267507.1 CTD-2587H24.1 chr19 55119250 55120383 - processed_pseudogene KNOWN OTTHUMG00000180541.1 1134 488 3 ENSG00000275863.1 MIR7975 chr19 55123225 55123292 - miRNA KNOWN NA 68 68 1 ENSG00000105048.15 TNNT1 chr19 55132794 55149354 - protein_coding KNOWN OTTHUMG00000180542.6 16561 2171 171 ENSG00000129991.11 TNNI3 chr19 55151767 55157773 - protein_coding KNOWN OTTHUMG00000180589.4 6007 2034 41 ENSG00000267110.1 CTD-2587H24.4 chr19 55154757 55160671 - protein_coding NOVEL OTTHUMG00000180667.3 5915 975 9 ENSG00000167646.12 DNAAF3 chr19 55158661 55166722 - protein_coding KNOWN OTTHUMG00000128547.8 8062 3302 111 ENSG00000267577.1 CTD-2587H24.5 chr19 55158939 55177540 + antisense NOVEL OTTHUMG00000180668.2 18602 1643 5 ENSG00000279263.1 OR2L8 chr1 247948858 247949796 + polymorphic_pseudogene KNOWN OTTHUMG00000040196.2 939 939 1 ENSG00000239137.1 snoU13 chr19 55167171 55167274 + snoRNA NOVEL NA 104 104 1 ENSG00000129990.13 SYT5 chr19 55171199 55180441 - protein_coding KNOWN OTTHUMG00000180669.2 9243 5347 55 ENSG00000080031.8 PTPRH chr19 55181248 55209506 - protein_coding KNOWN OTTHUMG00000180701.2 28259 4344 63 ENSG00000267649.1 CTD-2587H24.10 chr19 55216660 55221616 + lincRNA NOVEL OTTHUMG00000180702.1 4957 1577 3 ENSG00000180089.5 TMEM86B chr19 55226639 55229264 - protein_coding KNOWN OTTHUMG00000187285.1 2626 2626 6 ENSG00000276570.1 CTD-2587H24.14 chr19 55227219 55230279 - processed_transcript NOVEL OTTHUMG00000180703.1 3061 3061 1 ENSG00000105063.17 PPP6R1 chr19 55229780 55258995 - protein_coding KNOWN OTTHUMG00000180704.1 29216 6583 72 ENSG00000275519.1 MIR6804 chr19 55230885 55230952 - miRNA KNOWN NA 68 68 1 ENSG00000278328.1 MIR6802 chr19 55239912 55239976 - miRNA KNOWN NA 65 65 1 ENSG00000278264.1 MIR6803 chr19 55245186 55245250 - miRNA KNOWN NA 65 65 1 ENSG00000187080.7 OR2AK2 chr1 247965233 247966339 + protein_coding KNOWN OTTHUMG00000040201.2 1107 1107 1 ENSG00000133265.9 HSPBP1 chr19 55262231 55280381 - protein_coding KNOWN OTTHUMG00000180705.1 18151 2159 46 ENSG00000160469.15 BRSK1 chr19 55282072 55312533 + protein_coding KNOWN OTTHUMG00000180735.3 30462 3841 80 ENSG00000280855.1 AC020922.1 chr19 55292997 55293068 - miRNA NOVEL NA 72 72 1 ENSG00000268729.1 CTD-2105E13.14 chr19 55312029 55312495 - antisense NOVEL OTTHUMG00000183397.1 467 359 2 ENSG00000180061.8 TMEM150B chr19 55312801 55334048 - protein_coding KNOWN OTTHUMG00000180709.4 21248 1713 45 ENSG00000276831.1 CTD-2105E13.16 chr19 55338945 55339283 - lincRNA NOVEL OTTHUMG00000186783.1 339 339 1 ENSG00000133247.12 SUV420H2 chr19 55339853 55348120 + protein_coding KNOWN OTTHUMG00000150483.4 8268 4775 60 ENSG00000160471.11 COX6B2 chr19 55349306 55354814 - protein_coding KNOWN OTTHUMG00000180774.6 5509 3815 39 ENSG00000267706.3 CTD-2105E13.6 chr19 55352301 55359516 - protein_coding NOVEL OTTHUMG00000180784.4 7216 3058 8 ENSG00000180043.10 FAM71E2 chr19 55354908 55363260 - protein_coding KNOWN OTTHUMG00000170357.6 8353 3274 20 ENSG00000237492.1 OR2L9P chr1 247974741 247975653 + unprocessed_pseudogene KNOWN OTTHUMG00000040215.1 913 913 1 ENSG00000095752.5 IL11 chr19 55364389 55370463 - protein_coding KNOWN OTTHUMG00000180789.1 6075 2671 17 ENSG00000160472.4 TMEM190 chr19 55376836 55378244 + protein_coding KNOWN OTTHUMG00000180794.1 1409 593 5 ENSG00000269275.1 CTD-2105E13.15 chr19 55377579 55378125 - antisense NOVEL OTTHUMG00000183398.1 547 547 1 ENSG00000233493.3 TMEM238 chr19 55379245 55384598 - protein_coding KNOWN OTTHUMG00000180795.1 5354 1000 2 ENSG00000108107.11 RPL28 chr19 55385345 55403250 + protein_coding KNOWN OTTHUMG00000171991.4 17906 6933 43 ENSG00000277326.1 MIR6805 chr19 55388181 55388242 + miRNA KNOWN NA 62 62 1 ENSG00000108106.12 UBE2S chr19 55399745 55407777 - protein_coding KNOWN OTTHUMG00000180811.3 8033 2788 14 ENSG00000187902.10 SHISA7 chr19 55428740 55442863 - protein_coding KNOWN OTTHUMG00000154240.2 14124 6083 9 ENSG00000063241.6 ISOC2 chr19 55452985 55462343 - protein_coding KNOWN OTTHUMG00000180830.1 9359 4408 35 ENSG00000279063.1 CTD-2537I9.15 chr19 55467438 55467934 - TEC KNOWN OTTHUMG00000181844.1 497 497 1 ENSG00000224227.2 OR2L1P chr1 247990267 247991204 + unprocessed_pseudogene KNOWN OTTHUMG00000040216.2 938 938 1 ENSG00000269859.1 CTD-2537I9.16 chr19 55475983 55476482 - antisense NOVEL OTTHUMG00000183416.1 500 500 1 ENSG00000197483.9 ZNF628 chr19 55476332 55484487 + protein_coding KNOWN OTTHUMG00000150396.3 8156 3851 6 ENSG00000090971.4 NAT14 chr19 55485004 55487568 + protein_coding KNOWN OTTHUMG00000180854.3 2565 2163 13 ENSG00000179954.13 SSC5D chr19 55488404 55519098 + protein_coding KNOWN OTTHUMG00000180855.3 30695 7314 52 ENSG00000187550.7 SBK2 chr19 55529733 55537089 - protein_coding KNOWN OTTHUMG00000155830.1 7357 1092 7 ENSG00000231274.5 SBK3 chr19 55540656 55545543 - protein_coding KNOWN OTTHUMG00000155831.5 4888 1520 7 ENSG00000218891.4 ZNF579 chr19 55576770 55580845 - protein_coding KNOWN OTTHUMG00000180857.3 4076 3321 4 ENSG00000179943.7 FIZ1 chr19 55591371 55601970 - protein_coding KNOWN OTTHUMG00000180858.3 10600 6790 13 ENSG00000171443.6 ZNF524 chr19 55600022 55603138 + protein_coding KNOWN OTTHUMG00000180859.2 3117 1360 5 ENSG00000261221.3 ZNF865 chr19 55605405 55617269 + protein_coding KNOWN OTTHUMG00000177108.1 11865 4005 4 ENSG00000199442.1 Y_RNA chr1 247997000 247997096 + misc_RNA NOVEL NA 97 97 1 ENSG00000276488.1 CTD-2537I9.18 chr19 55612490 55613097 - antisense NOVEL OTTHUMG00000186784.1 608 608 1 ENSG00000179922.5 ZNF784 chr19 55620742 55624601 - protein_coding KNOWN OTTHUMG00000180860.2 3860 2058 4 ENSG00000213015.7 ZNF580 chr19 55635016 55643469 + protein_coding KNOWN OTTHUMG00000180868.2 8454 2692 11 ENSG00000171425.8 ZNF581 chr19 55635459 55645622 + protein_coding KNOWN OTTHUMG00000180869.3 10164 1736 8 ENSG00000173581.6 CCDC106 chr19 55641062 55653161 + protein_coding KNOWN OTTHUMG00000180907.1 12100 2709 39 ENSG00000063244.11 U2AF2 chr19 55654146 55674715 + protein_coding KNOWN OTTHUMG00000180908.4 20570 4115 54 ENSG00000267523.1 CTD-2537I9.12 chr19 55661901 55674715 - antisense NOVEL OTTHUMG00000180909.1 12815 561 4 ENSG00000267096.1 CTD-2537I9.13 chr19 55670632 55672069 + sense_intronic NOVEL OTTHUMG00000180910.1 1438 802 2 ENSG00000063245.13 EPN1 chr19 55675226 55709858 + protein_coding KNOWN OTTHUMG00000180911.5 34633 17616 44 ENSG00000211571.1 AC010525.1 chr19 55684772 55684916 + miRNA NOVEL NA 145 145 1 ENSG00000232215.2 OR2L6P chr1 248003129 248004068 + unprocessed_pseudogene KNOWN OTTHUMG00000040217.2 940 940 1 ENSG00000267117.1 AC010525.4 chr19 55694118 55694558 - antisense NOVEL OTTHUMG00000180912.1 441 441 1 ENSG00000267689.1 AC010525.5 chr19 55705978 55706172 - processed_pseudogene KNOWN OTTHUMG00000180919.1 195 195 1 ENSG00000268593.3 CTD-2611O12.6 chr19 55707550 55707855 + processed_pseudogene KNOWN OTTHUMG00000183283.1 306 306 1 ENSG00000185792.8 NLRP9 chr19 55708432 55738402 - protein_coding KNOWN OTTHUMG00000180920.2 29971 3599 18 ENSG00000222524.1 RN7SKP109 chr19 55737285 55737600 + misc_RNA KNOWN NA 316 316 1 ENSG00000223638.3 RFPL4A chr19 55759014 55763175 + protein_coding KNOWN OTTHUMG00000165449.1 4162 1035 3 ENSG00000229292.1 RFPL4AL1 chr19 55769141 55773179 + protein_coding KNOWN OTTHUMG00000165450.1 4039 908 3 ENSG00000255238.1 RFPL4AP1 chr19 55777553 55778900 + processed_pseudogene KNOWN OTTHUMG00000165451.1 1348 850 2 ENSG00000179873.13 NLRP11 chr19 55785397 55836800 - protein_coding KNOWN OTTHUMG00000180921.5 51404 4312 54 ENSG00000160505.14 NLRP4 chr19 55836578 55881854 + protein_coding KNOWN OTTHUMG00000181734.3 45277 3903 28 ENSG00000197454.1 OR2L5 chr1 248021948 248022886 + protein_coding KNOWN OTTHUMG00000040194.1 939 939 1 ENSG00000173572.10 NLRP13 chr19 55891699 55932336 - protein_coding KNOWN OTTHUMG00000167839.2 40638 3580 23 ENSG00000179709.7 NLRP8 chr19 55947832 55988629 + protein_coding KNOWN OTTHUMG00000181754.1 40798 3934 20 ENSG00000171487.13 NLRP5 chr19 55999726 56061813 + protein_coding KNOWN OTTHUMG00000149887.3 62088 4080 34 ENSG00000267522.1 CTD-2621I17.6 chr19 56066684 56078801 + lincRNA NOVEL OTTHUMG00000181876.1 12118 1661 4 ENSG00000281209.1 Metazoa_SRP chr19 56072367 56072640 - misc_RNA NOVEL NA 274 274 1 ENSG00000142409.5 ZNF787 chr19 56087366 56121280 - protein_coding KNOWN OTTHUMG00000181760.4 33915 3671 7 ENSG00000223060.1 Y_RNA chr19 56105416 56105510 + misc_RNA NOVEL NA 95 95 1 ENSG00000279959.1 CTD-2621I17.8 chr19 56127236 56127466 - TEC KNOWN OTTHUMG00000183286.1 231 231 1 ENSG00000167685.13 ZNF444 chr19 56132599 56160893 + protein_coding KNOWN OTTHUMG00000181761.2 28295 7239 40 ENSG00000279794.1 CTD-2621I17.3 chr19 56149817 56150490 + TEC KNOWN OTTHUMG00000181762.1 674 674 1 ENSG00000200085.1 Y_RNA chr1 248029120 248029221 + misc_RNA NOVEL NA 102 102 1 ENSG00000197487.7 GALP chr19 56176020 56185775 + protein_coding KNOWN OTTHUMG00000181826.1 9756 938 13 ENSG00000197213.8 ZSCAN5B chr19 56189570 56197920 - protein_coding KNOWN OTTHUMG00000181827.3 8351 2059 16 ENSG00000204532.5 ZSCAN5C chr19 56202301 56209452 + protein_coding KNOWN OTTHUMG00000167475.1 7152 1892 9 ENSG00000242411.2 CTD-2086L14.1 chr19 56217168 56217777 - processed_pseudogene KNOWN OTTHUMG00000158320.2 610 610 1 ENSG00000131848.8 ZSCAN5A chr19 56219670 56368383 - protein_coding KNOWN OTTHUMG00000181883.4 148714 8039 57 ENSG00000267908.1 ZSCAN5D chr19 56240404 56247494 + protein_coding NOVEL OTTHUMG00000183254.1 7091 1491 5 ENSG00000267710.4 AC006116.20 chr19 56272769 56310450 + protein_coding NOVEL OTTHUMG00000182076.2 37682 2215 35 ENSG00000267298.1 AC006116.19 chr19 56311928 56312486 - sense_intronic NOVEL OTTHUMG00000182077.1 559 559 1 ENSG00000267549.4 AC006116.17 chr19 56314703 56341287 + antisense NOVEL OTTHUMG00000182078.2 26585 2537 7 ENSG00000200646.1 Y_RNA chr19 56316524 56316636 - misc_RNA NOVEL NA 113 113 1 ENSG00000232456.1 RP11-5P18.10 chr1 16035178 16040029 - unprocessed_pseudogene KNOWN OTTHUMG00000009526.1 4852 704 5 ENSG00000203663.3 OR2L2 chr1 248038268 248039206 + protein_coding KNOWN OTTHUMG00000040214.1 939 939 1 ENSG00000213014.3 VN2R17P chr19 56317177 56318008 - processed_pseudogene KNOWN OTTHUMG00000182139.1 832 832 1 ENSG00000266907.1 AC006116.22 chr19 56319790 56322310 - processed_pseudogene KNOWN OTTHUMG00000182140.1 2521 2171 2 ENSG00000267145.1 AC006116.14 chr19 56338288 56338648 - processed_pseudogene KNOWN OTTHUMG00000181957.1 361 361 1 ENSG00000266932.1 AC006116.13 chr19 56342432 56343419 - transcribed_processed_pseudogene KNOWN OTTHUMG00000181958.2 988 988 1 ENSG00000267429.1 AC006116.15 chr19 56347081 56348183 - sense_intronic NOVEL OTTHUMG00000181963.1 1103 1103 1 ENSG00000267606.1 AC006116.21 chr19 56354493 56368053 - lincRNA NOVEL OTTHUMG00000182136.1 13561 1040 9 ENSG00000240225.9 ZNF542P chr19 56368099 56379828 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000140382.3 11730 4690 63 ENSG00000018869.15 ZNF582 chr19 56375846 56393545 - protein_coding KNOWN OTTHUMG00000181939.4 17700 3350 34 ENSG00000267776.1 AC006116.24 chr19 56376704 56377284 - sense_intronic NOVEL OTTHUMG00000182150.1 581 581 1 ENSG00000267459.1 AC006116.27 chr19 56377037 56377792 - transcribed_processed_pseudogene KNOWN OTTHUMG00000182174.1 756 756 1 ENSG00000200982.1 Y_RNA chr1 248045788 248045889 + misc_RNA NOVEL NA 102 102 1 ENSG00000267781.1 SLC25A36P1 chr19 56386226 56386690 + processed_pseudogene KNOWN OTTHUMG00000182175.1 465 465 1 ENSG00000267192.1 AC006116.12 chr19 56387412 56388424 + antisense NOVEL OTTHUMG00000181959.1 1013 452 2 ENSG00000267454.4 ZNF582-AS1 chr19 56393656 56399172 + lincRNA NOVEL OTTHUMG00000182151.1 5517 2037 15 ENSG00000266631.1 AC006116.1 chr19 56396316 56396401 - miRNA NOVEL NA 86 86 1 ENSG00000198440.8 ZNF583 chr19 56397966 56436035 + protein_coding KNOWN OTTHUMG00000168874.4 38070 8060 32 ENSG00000198046.10 ZNF667 chr19 56439325 56478065 - protein_coding KNOWN OTTHUMG00000181941.3 38741 8810 38 ENSG00000166770.9 ZNF667-AS1 chr19 56477250 56500666 + lincRNA NOVEL OTTHUMG00000181942.4 23417 3629 22 ENSG00000279405.1 AC098795.1 chr19 56480397 56483977 - TEC KNOWN OTTHUMG00000183256.1 3581 331 2 ENSG00000276578.1 LLNLR-285B5.1 chr19 56485923 56494280 - unprocessed_pseudogene KNOWN OTTHUMG00000188041.1 8358 607 4 ENSG00000196263.6 ZNF471 chr19 56507843 56530221 + protein_coding KNOWN OTTHUMG00000181943.2 22379 6783 16 ENSG00000198128.3 OR2L3 chr1 248060682 248061620 + protein_coding KNOWN OTTHUMG00000040195.1 939 939 1 ENSG00000267224.1 AC005498.4 chr19 56535299 56535763 + lincRNA NOVEL OTTHUMG00000182161.1 465 465 1 ENSG00000267421.5 AC005498.3 chr19 56536156 56538575 - lincRNA NOVEL OTTHUMG00000181946.3 2420 1105 13 ENSG00000196867.6 ZFP28 chr19 56538948 56556810 + protein_coding KNOWN OTTHUMG00000181944.4 17863 6974 25 ENSG00000269696.1 AC007228.11 chr19 56545566 56567411 - antisense NOVEL OTTHUMG00000182205.1 21846 2045 2 ENSG00000281545.1 AC005498.1 chr19 56547105 56547241 + miRNA NOVEL NA 137 137 1 ENSG00000197016.10 ZNF470 chr19 56567511 56588911 + protein_coding KNOWN OTTHUMG00000182141.5 21401 9627 25 ENSG00000268847.1 SIGLEC31P chr19 56589495 56590281 - unprocessed_pseudogene KNOWN OTTHUMG00000182191.2 787 551 2 ENSG00000197951.7 ZNF71 chr19 56595264 56626481 + protein_coding KNOWN OTTHUMG00000182157.2 31218 6170 10 ENSG00000268036.1 AC007228.8 chr19 56613810 56613951 + transcribed_processed_pseudogene KNOWN OTTHUMG00000182184.1 142 142 1 ENSG00000268182.4 SMIM17 chr19 56643145 56655766 + protein_coding KNOWN OTTHUMG00000177861.1 12622 1076 7 ENSG00000197067.5 OR2T32P chr1 248083634 248084596 - unprocessed_pseudogene KNOWN OTTHUMG00000040455.3 963 963 1 ENSG00000127903.13 ZNF835 chr19 56661981 56671783 - protein_coding KNOWN OTTHUMG00000182158.2 9803 3473 4 ENSG00000268352.1 AC007228.5 chr19 56672268 56684653 + lincRNA NOVEL OTTHUMG00000182159.1 12386 517 2 ENSG00000268568.1 AC007228.9 chr19 56672574 56673901 - lincRNA NOVEL OTTHUMG00000182185.1 1328 1328 1 ENSG00000269793.4 ZIM2-AS1 chr19 56690686 56799646 + antisense NOVEL OTTHUMG00000182160.2 108961 3003 18 ENSG00000265070.1 AC006115.1 chr19 56719203 56719287 - miRNA NOVEL NA 85 85 1 ENSG00000268067.1 OR5AH1P chr19 56760933 56761215 + transcribed_processed_pseudogene KNOWN OTTHUMG00000182169.1 283 283 1 ENSG00000269699.4 ZIM2 chr19 56774552 56840729 - protein_coding KNOWN OTTHUMG00000171953.3 66178 2834 76 ENSG00000268407.1 AC006115.6 chr19 56793048 56793249 - processed_pseudogene KNOWN OTTHUMG00000182177.1 202 202 1 ENSG00000198300.11 PEG3 chr19 56810083 56840728 - protein_coding KNOWN OTTHUMG00000171954.3 30646 9278 65 ENSG00000268654.1 MIMT1 chr19 56840902 56848556 + lincRNA KNOWN OTTHUMG00000182170.1 7655 2002 3 ENSG00000177233.2 OR2M1P chr1 248121932 248122882 + unprocessed_pseudogene KNOWN OTTHUMG00000040445.2 951 951 1 ENSG00000281440.1 MIMT1_1 chr19 56840905 56840992 + sRNA NOVEL NA 88 88 1 ENSG00000274777.1 MIMT1_2 chr19 56848068 56848204 + misc_RNA NOVEL NA 137 137 1 ENSG00000269786.1 CTC-258N23.3 chr19 56922018 56922213 + processed_pseudogene KNOWN OTTHUMG00000182173.1 196 196 1 ENSG00000268483.1 RPL7AP69 chr19 57065334 57066139 + processed_pseudogene KNOWN OTTHUMG00000158331.2 806 806 1 ENSG00000274219.1 CTC-360J11.7 chr19 57111120 57112027 - unprocessed_pseudogene KNOWN OTTHUMG00000188042.1 908 908 1 ENSG00000131864.9 USP29 chr19 57119138 57131926 + protein_coding KNOWN OTTHUMG00000183101.1 12789 3894 13 ENSG00000141946.1 ZIM3 chr19 57134096 57145202 - protein_coding KNOWN OTTHUMG00000183102.1 11107 2627 5 ENSG00000270293.1 CTC-360J11.5 chr19 57150513 57150978 + processed_pseudogene KNOWN OTTHUMG00000184929.1 466 466 1 ENSG00000270790.1 CTC-360J11.6 chr19 57151587 57151860 - processed_pseudogene KNOWN OTTHUMG00000184930.1 274 274 1 ENSG00000258873.2 DUXA chr19 57154021 57167443 - protein_coding KNOWN OTTHUMG00000170714.3 13423 1006 6 ENSG00000162727.3 OR2M5 chr1 248145148 248146086 + protein_coding KNOWN OTTHUMG00000040447.1 939 939 1 ENSG00000268379.1 CTC-360J11.4 chr19 57175233 57177921 + processed_pseudogene KNOWN OTTHUMG00000183103.1 2689 2072 3 ENSG00000083844.9 ZNF264 chr19 57191500 57222846 + protein_coding KNOWN OTTHUMG00000183104.2 31347 12532 20 ENSG00000105146.11 AURKC chr19 57230802 57235548 + protein_coding KNOWN OTTHUMG00000183106.1 4747 1948 50 ENSG00000204524.6 ZNF805 chr19 57240685 57255135 + protein_coding KNOWN OTTHUMG00000183219.1 14451 2523 7 ENSG00000268713.1 CTC-444N24.8 chr19 57261354 57262738 + lincRNA NOVEL OTTHUMG00000183220.1 1385 1385 1 ENSG00000267871.4 CTC-444N24.6 chr19 57267220 57280334 - antisense NOVEL OTTHUMG00000183221.1 13115 738 7 ENSG00000197714.7 ZNF460 chr19 57280051 57293569 + protein_coding KNOWN OTTHUMG00000183222.1 13519 3505 9 ENSG00000279541.1 CTC-444N24.7 chr19 57293083 57294469 - TEC KNOWN OTTHUMG00000183223.1 1387 1387 1 ENSG00000268205.1 CTC-444N24.11 chr19 57304305 57308562 + lincRNA NOVEL OTTHUMG00000183241.1 4258 4258 1 ENSG00000268723.1 CTC-444N24.9 chr19 57317208 57317562 - processed_pseudogene KNOWN OTTHUMG00000183242.1 355 355 1 ENSG00000198601.2 OR2M2 chr1 248179986 248181029 + protein_coding KNOWN OTTHUMG00000040460.2 1044 1044 1 ENSG00000178229.7 ZNF543 chr19 57320509 57330776 + protein_coding KNOWN OTTHUMG00000183243.1 10268 3659 4 ENSG00000268678.1 CTC-444N24.13 chr19 57350848 57352012 - antisense NOVEL OTTHUMG00000183244.1 1165 1045 2 ENSG00000131845.13 ZNF304 chr19 57351307 57359898 + protein_coding KNOWN OTTHUMG00000183245.1 8592 4609 15 ENSG00000152433.13 ZNF547 chr19 57363477 57379565 + protein_coding KNOWN OTTHUMG00000183246.3 16089 3568 13 ENSG00000256060.2 TRAPPC2B chr19 57363511 57365353 + protein_coding KNOWN OTTHUMG00000183279.1 1843 1843 3 ENSG00000268133.1 AC003002.4 chr19 57363566 57398584 + protein_coding PUTATIVE OTTHUMG00000183282.1 35019 456 4 ENSG00000188785.10 ZNF548 chr19 57389850 57401418 + protein_coding KNOWN OTTHUMG00000183281.2 11569 4587 49 ENSG00000269533.4 AC003002.6 chr19 57389884 57419994 + protein_coding NOVEL OTTHUMG00000183372.1 30111 1210 13 ENSG00000268533.1 AC004076.7 chr19 57394183 57438457 + protein_coding PUTATIVE OTTHUMG00000183378.1 44275 521 3 ENSG00000186272.11 ZNF17 chr19 57411163 57421939 + protein_coding KNOWN OTTHUMG00000183371.2 10777 3762 18 ENSG00000228198.2 OR2M3 chr1 248203068 248204006 + protein_coding KNOWN OTTHUMG00000040459.1 939 939 1 ENSG00000186230.6 ZNF749 chr19 57435329 57445485 + protein_coding KNOWN OTTHUMG00000150372.2 10157 3017 9 ENSG00000268163.1 AC004076.9 chr19 57437970 57477536 - protein_coding NOVEL OTTHUMG00000183399.1 39567 1028 12 ENSG00000276449.1 AC004076.5 chr19 57449689 57453011 + antisense NOVEL OTTHUMG00000183379.1 3323 3323 1 ENSG00000178201.4 VN1R1 chr19 57454790 57457142 - protein_coding KNOWN OTTHUMG00000183400.1 2353 2353 1 ENSG00000268545.1 VN1R107P chr19 57459912 57460120 + unprocessed_pseudogene KNOWN OTTHUMG00000183401.1 209 209 1 ENSG00000197128.10 ZNF772 chr19 57466663 57477570 - protein_coding KNOWN OTTHUMG00000168007.3 10908 6096 33 ENSG00000268266.1 AC003005.2 chr19 57477649 57482996 + lincRNA NOVEL OTTHUMG00000183402.1 5348 664 4 ENSG00000105136.18 ZNF419 chr19 57487711 57496097 + protein_coding KNOWN OTTHUMG00000037073.9 8387 8008 67 ENSG00000268107.4 AC003005.4 chr19 57487718 57505381 + protein_coding NOVEL OTTHUMG00000183404.1 17664 603 8 ENSG00000152439.11 ZNF773 chr19 57499915 57518404 + protein_coding KNOWN OTTHUMG00000183403.2 18490 8073 25 ENSG00000171180.1 OR2M4 chr1 248238929 248239864 + protein_coding KNOWN OTTHUMG00000040456.1 936 936 1 ENSG00000121406.7 ZNF549 chr19 57527325 57557542 + protein_coding KNOWN OTTHUMG00000183465.1 30218 9279 13 ENSG00000251369.7 ZNF550 chr19 57535257 57559863 - protein_coding KNOWN OTTHUMG00000133709.5 24607 5087 33 ENSG00000083817.8 ZNF416 chr19 57571566 57578927 - protein_coding KNOWN OTTHUMG00000183467.1 7362 2561 4 ENSG00000171649.10 ZIK1 chr19 57578456 57593777 + protein_coding KNOWN OTTHUMG00000183468.1 15322 5257 24 ENSG00000183647.9 ZNF530 chr19 57599885 57612722 + protein_coding KNOWN OTTHUMG00000183469.1 12838 5019 16 ENSG00000213762.9 ZNF134 chr19 57614233 57624723 + protein_coding KNOWN OTTHUMG00000183471.2 10491 5138 15 ENSG00000268392.1 AC003682.16 chr19 57625032 57626950 + lincRNA NOVEL OTTHUMG00000183472.1 1919 462 2 ENSG00000121417.12 ZNF211 chr19 57630395 57642779 + protein_coding KNOWN OTTHUMG00000168012.1 12385 3300 45 ENSG00000269097.1 AC003682.17 chr19 57664280 57665039 + processed_pseudogene KNOWN OTTHUMG00000183473.1 760 760 1 ENSG00000180532.9 ZSCAN4 chr19 57668935 57679152 + protein_coding KNOWN OTTHUMG00000183474.1 10218 2249 9 ENSG00000177212.3 OR2T33 chr1 248272852 248273814 - protein_coding KNOWN OTTHUMG00000040458.1 963 963 1 ENSG00000204519.9 ZNF551 chr19 57681969 57717301 + protein_coding KNOWN OTTHUMG00000183470.2 35333 4709 11 ENSG00000269026.2 AC003006.7 chr19 57682045 57753575 + protein_coding NOVEL OTTHUMG00000183475.1 71531 833 5 ENSG00000179909.14 ZNF154 chr19 57697367 57709194 - protein_coding KNOWN OTTHUMG00000140375.2 11828 5713 9 ENSG00000083814.11 ZNF671 chr19 57719751 57727624 - protein_coding KNOWN OTTHUMG00000183476.1 7874 3532 24 ENSG00000264453.1 AC003006.1 chr19 57738465 57738550 + miRNA NOVEL NA 86 86 1 ENSG00000152443.11 ZNF776 chr19 57746796 57758159 + protein_coding KNOWN OTTHUMG00000156943.3 11364 5484 13 ENSG00000083828.14 ZNF586 chr19 57769655 57819939 + protein_coding KNOWN OTTHUMG00000183477.2 50285 3261 17 ENSG00000178935.5 ZNF552 chr19 57803841 57814913 - protein_coding KNOWN OTTHUMG00000183478.1 11073 2989 10 ENSG00000268750.5 CTD-2583A14.10 chr19 57819719 57858941 + protein_coding NOVEL OTTHUMG00000183527.3 39223 1159 20 ENSG00000269343.5 ZNF587B chr19 57819741 57846238 + protein_coding KNOWN OTTHUMG00000183479.2 26498 4380 11 ENSG00000184908.16 CLCNKB chr1 16043736 16057308 + protein_coding KNOWN OTTHUMG00000009530.2 13573 2939 52 ENSG00000177201.1 OR2T12 chr1 248294616 248295578 - protein_coding KNOWN OTTHUMG00000040457.1 963 963 1 ENSG00000269304.1 AC010522.1 chr19 57826461 57826778 - processed_pseudogene KNOWN OTTHUMG00000183480.1 318 318 1 ENSG00000204514.8 ZNF814 chr19 57848731 57889074 - protein_coding KNOWN OTTHUMG00000183519.1 40344 12600 51 ENSG00000198466.11 ZNF587 chr19 57849857 57865112 + protein_coding KNOWN OTTHUMG00000154901.4 15256 7350 12 ENSG00000269867.1 CTD-2583A14.8 chr19 57867038 57868172 - sense_intronic NOVEL OTTHUMG00000183520.1 1135 679 2 ENSG00000270804.1 CTD-2583A14.11 chr19 57867885 57868834 + transcribed_processed_pseudogene KNOWN OTTHUMG00000184914.1 950 936 3 ENSG00000269476.1 CTD-2583A14.9 chr19 57876765 57916591 - protein_coding NOVEL OTTHUMG00000183521.1 39827 1020 6 ENSG00000173480.9 ZNF417 chr19 57900296 57916610 - protein_coding KNOWN OTTHUMG00000183488.2 16315 4204 25 ENSG00000196724.11 ZNF418 chr19 57921884 57935393 - protein_coding KNOWN OTTHUMG00000183448.2 13510 4501 51 ENSG00000152454.3 ZNF256 chr19 57940833 57947675 - protein_coding KNOWN OTTHUMG00000183449.1 6843 2176 5 ENSG00000243234.1 CTD-2583A14.1 chr19 57953158 57953759 - processed_pseudogene KNOWN OTTHUMG00000158333.1 602 602 1 ENSG00000177186.3 OR2M7 chr1 248323630 248324568 - protein_coding KNOWN OTTHUMG00000040461.1 939 939 1 ENSG00000177025.3 C19orf18 chr19 57958437 57974534 - protein_coding KNOWN OTTHUMG00000183450.1 16098 915 6 ENSG00000166704.10 ZNF606 chr19 57977053 58003349 - protein_coding KNOWN OTTHUMG00000169804.1 26297 7635 40 ENSG00000176593.6 CTD-2368P22.1 chr19 58002061 58011232 + processed_transcript NOVEL OTTHUMG00000169805.1 9172 8787 19 ENSG00000235974.1 VN2R19P chr19 58012589 58025926 - unitary_pseudogene KNOWN OTTHUMG00000152894.1 13338 1052 3 ENSG00000152467.8 ZSCAN1 chr19 58034032 58054631 + protein_coding KNOWN OTTHUMG00000183381.1 20600 2389 13 ENSG00000268660.1 LETM1P2 chr19 58044592 58046769 + processed_pseudogene KNOWN OTTHUMG00000183382.1 2178 2178 1 ENSG00000270837.1 HNRNPDLP4 chr19 58049046 58049346 - processed_pseudogene KNOWN OTTHUMG00000184915.1 301 301 1 ENSG00000176293.18 ZNF135 chr19 58059239 58086310 + protein_coding KNOWN OTTHUMG00000160719.5 27072 6418 28 ENSG00000243642.3 RN7SL526P chr19 58069970 58070288 + misc_RNA KNOWN NA 319 319 1 ENSG00000121413.11 ZSCAN18 chr19 58083838 58118427 - protein_coding KNOWN OTTHUMG00000183451.1 34590 8307 67 ENSG00000177174.1 OR14C36 chr1 248348775 248349713 + protein_coding KNOWN OTTHUMG00000040463.1 939 939 1 ENSG00000181894.13 ZNF329 chr19 58126252 58155110 - protein_coding KNOWN OTTHUMG00000183453.2 28859 4309 18 ENSG00000268293.1 CTD-2623H2.7 chr19 58136713 58137054 + processed_pseudogene KNOWN OTTHUMG00000183454.1 342 342 1 ENSG00000269236.1 CTD-2619J13.1 chr19 58166166 58167145 + processed_pseudogene KNOWN OTTHUMG00000183455.1 980 980 1 ENSG00000171606.16 ZNF274 chr19 58183029 58213562 + protein_coding KNOWN OTTHUMG00000183456.4 30534 8333 65 ENSG00000213013.4 RPS15AP36 chr19 58216180 58216561 + processed_pseudogene KNOWN OTTHUMG00000158336.1 382 382 1 ENSG00000268866.1 AC020915.2 chr19 58224506 58225469 + processed_pseudogene KNOWN OTTHUMG00000183457.1 964 964 1 ENSG00000198131.12 ZNF544 chr19 58228594 58277495 + protein_coding KNOWN OTTHUMG00000183458.2 48902 7130 102 ENSG00000269545.1 CTD-3138B18.4 chr19 58229465 58286807 + protein_coding NOVEL OTTHUMG00000183459.1 57343 1463 5 ENSG00000268516.2 CTD-3138B18.5 chr19 58257270 58278808 - antisense NOVEL OTTHUMG00000183460.2 21539 2708 2 ENSG00000268201.1 CTD-3138B18.6 chr19 58266635 58267685 + sense_intronic NOVEL OTTHUMG00000183461.1 1051 550 2 ENSG00000196944.3 OR2T4 chr1 248361581 248362627 + protein_coding KNOWN OTTHUMG00000040453.2 1047 1047 1 ENSG00000278129.1 ZNF8 chr19 58278951 58302805 + protein_coding KNOWN OTTHUMG00000182073.2 23855 9128 4 ENSG00000267216.1 AC010642.1 chr19 58278966 58315197 + protein_coding NOVEL OTTHUMG00000182074.1 36232 4227 7 ENSG00000142396.9 ERVK3-1 chr19 58305319 58315663 + processed_transcript KNOWN OTTHUMG00000150367.6 10345 5023 27 ENSG00000264333.1 AC020915.1 chr19 58310917 58311002 - miRNA NOVEL NA 86 86 1 ENSG00000269794.1 AC010642.2 chr19 58319277 58320489 + processed_pseudogene KNOWN OTTHUMG00000183462.1 1213 1213 1 ENSG00000182318.5 ZSCAN22 chr19 58327019 58342332 + protein_coding KNOWN OTTHUMG00000183463.1 15314 4629 3 ENSG00000277588.1 MIR6806 chr19 58334688 58334751 + miRNA KNOWN NA 64 64 1 ENSG00000121410.10 A1BG chr19 58345178 58353499 - protein_coding KNOWN OTTHUMG00000183507.1 8322 4006 24 ENSG00000268230.4 CTD-2619J13.8 chr19 58346854 58362751 - processed_transcript NOVEL OTTHUMG00000183515.1 15898 4151 22 ENSG00000268895.4 A1BG-AS1 chr19 58347751 58355183 + antisense KNOWN OTTHUMG00000183508.1 7433 2793 22 ENSG00000198104.2 OR2T6 chr1 248387609 248388535 + protein_coding KNOWN OTTHUMG00000040448.1 927 927 1 ENSG00000279611.1 CTD-2619J13.5 chr19 58350795 58351720 + TEC KNOWN OTTHUMG00000183509.1 926 926 1 ENSG00000174586.9 ZNF497 chr19 58354357 58362848 - protein_coding KNOWN OTTHUMG00000183510.3 8492 3897 9 ENSG00000268049.1 CTD-2619J13.9 chr19 58357999 58359603 + antisense NOVEL OTTHUMG00000183516.1 1605 1154 2 ENSG00000269054.1 CTD-2619J13.3 chr19 58362585 58366591 + antisense NOVEL OTTHUMG00000183511.1 4007 790 3 ENSG00000252211.1 RNA5SP473 chr19 58363438 58363562 + rRNA KNOWN NA 125 125 1 ENSG00000152475.6 ZNF837 chr19 58367618 58381060 - protein_coding KNOWN OTTHUMG00000183517.1 13443 2076 6 ENSG00000083845.7 RPS5 chr19 58386400 58394806 + protein_coding KNOWN OTTHUMG00000183530.1 8407 3617 43 ENSG00000266640.1 MIR4754 chr19 58386770 58386858 - miRNA KNOWN NA 89 89 1 ENSG00000269855.2 RNF225 chr19 58396090 58397079 + protein_coding KNOWN OTTHUMG00000189258.1 990 990 1 ENSG00000268307.1 CTD-2619J13.13 chr19 58400221 58400679 + lincRNA NOVEL OTTHUMG00000183532.1 459 459 1 ENSG00000175143.3 OR2T1 chr1 248405995 248407104 + protein_coding KNOWN OTTHUMG00000040450.2 1110 1110 1 ENSG00000171574.16 ZNF584 chr19 58401504 58418327 + protein_coding KNOWN OTTHUMG00000183533.1 16824 3696 30 ENSG00000232098.3 CTD-2619J13.14 chr19 58404238 58408484 - lincRNA NOVEL OTTHUMG00000183534.1 4247 3417 7 ENSG00000268543.1 CTD-2619J13.16 chr19 58418560 58419310 + TEC KNOWN OTTHUMG00000183535.1 751 495 2 ENSG00000268912.1 CTD-2619J13.17 chr19 58428632 58431148 - lincRNA NOVEL OTTHUMG00000183536.1 2517 2517 1 ENSG00000131849.10 ZNF132 chr19 58432814 58440222 - protein_coding KNOWN OTTHUMG00000183537.1 7409 3404 4 ENSG00000269473.1 CTD-2619J13.19 chr19 58440448 58445849 + lincRNA NOVEL OTTHUMG00000183538.1 5402 5402 1 ENSG00000249471.6 ZNF324B chr19 58451604 58457833 + protein_coding KNOWN OTTHUMG00000183539.1 6230 4042 24 ENSG00000083812.10 ZNF324 chr19 58467045 58475436 + protein_coding KNOWN OTTHUMG00000183540.2 8392 5664 15 ENSG00000083838.14 ZNF446 chr19 58474017 58481230 + protein_coding KNOWN OTTHUMG00000183541.1 7214 4923 46 ENSG00000269106.1 CTD-2619J13.23 chr19 58475355 58475763 - antisense NOVEL OTTHUMG00000183542.1 409 409 1 ENSG00000227152.5 OR2T7 chr1 248441207 248442133 + protein_coding KNOWN OTTHUMG00000040449.3 927 927 1 ENSG00000083807.8 SLC27A5 chr19 58479512 58512413 - protein_coding KNOWN OTTHUMG00000183543.1 32902 8025 37 ENSG00000252334.1 RNU6-1337P chr19 58483749 58483843 - snRNA KNOWN NA 95 95 1 ENSG00000265272.2 RN7SL693P chr19 58490797 58491075 + misc_RNA KNOWN NA 279 279 1 ENSG00000273901.1 CTD-2619J13.27 chr19 58500505 58501137 + antisense NOVEL OTTHUMG00000186789.2 633 633 1 ENSG00000119574.11 ZBTB45 chr19 58513530 58538911 - protein_coding KNOWN OTTHUMG00000183545.1 25382 3418 13 ENSG00000264910.2 RN7SL525P chr19 58543299 58543578 - misc_RNA KNOWN NA 280 280 1 ENSG00000130726.10 TRIM28 chr19 58544091 58550722 + protein_coding KNOWN OTTHUMG00000183546.1 6632 4034 95 ENSG00000275924.1 MIR6807 chr19 58550285 58550376 + miRNA KNOWN NA 92 92 1 ENSG00000130724.7 CHMP2A chr19 58551566 58555124 - protein_coding KNOWN OTTHUMG00000183547.1 3559 2129 32 ENSG00000130725.6 UBE2M chr19 58555712 58558960 - protein_coding KNOWN OTTHUMG00000183548.1 3249 1831 22 ENSG00000196240.3 OR2T2 chr1 248452798 248453772 + protein_coding KNOWN OTTHUMG00000040480.1 975 975 1 ENSG00000267858.4 MZF1-AS1 chr19 58559129 58574797 + antisense NOVEL OTTHUMG00000183549.1 15669 2968 13 ENSG00000099326.7 MZF1 chr19 58561931 58573575 - protein_coding KNOWN OTTHUMG00000183550.1 11645 6691 33 ENSG00000213753.9 CENPBD1P1 chr19 58573503 58599801 + transcribed_processed_pseudogene KNOWN OTTHUMG00000158344.2 26299 4969 20 ENSG00000268784.1 MGC2752 chr19 58582024 58582609 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000183523.1 586 586 1 ENSG00000269032.1 AC016629.7 chr19 58586158 58586356 + transcribed_processed_pseudogene KNOWN OTTHUMG00000183524.1 199 199 1 ENSG00000269600.1 AC016629.3 chr19 58593896 58599355 - antisense NOVEL OTTHUMG00000183526.1 5460 1120 5 ENSG00000178591.6 DEFB125 chr20 87250 97094 + protein_coding KNOWN OTTHUMG00000031614.3 9845 1258 4 ENSG00000125788.5 DEFB126 chr20 142369 145751 + protein_coding KNOWN OTTHUMG00000031616.3 3383 655 5 ENSG00000088782.4 DEFB127 chr20 157470 159163 + protein_coding KNOWN OTTHUMG00000031617.1 1694 514 2 ENSG00000274590.1 AL360078.1 chr20 173229 173296 - miRNA NOVEL NA 68 68 1 ENSG00000196539.3 OR2T3 chr1 248473351 248474307 + protein_coding KNOWN OTTHUMG00000040452.1 957 957 1 ENSG00000185982.6 DEFB128 chr20 187853 189681 - protein_coding KNOWN OTTHUMG00000043057.2 1829 373 2 ENSG00000125903.4 DEFB129 chr20 227258 229886 + protein_coding KNOWN OTTHUMG00000031618.2 2629 698 2 ENSG00000186458.4 DEFB132 chr20 257736 261096 + protein_coding KNOWN OTTHUMG00000043061.1 3361 2121 2 ENSG00000272874.1 RP5-1103G7.10 chr20 267186 268857 + lincRNA NOVEL OTTHUMG00000186509.1 1672 1672 1 ENSG00000196476.10 C20orf96 chr20 270863 290778 - protein_coding KNOWN OTTHUMG00000031626.3 19916 1730 31 ENSG00000247315.3 ZCCHC3 chr20 296968 300321 + protein_coding KNOWN OTTHUMG00000188280.1 3354 3354 1 ENSG00000225377.4 NRSN2-AS1 chr20 320313 348224 - antisense NOVEL OTTHUMG00000031624.1 27912 875 6 ENSG00000177732.7 SOX12 chr20 325401 330224 + protein_coding KNOWN OTTHUMG00000031623.3 4824 4824 1 ENSG00000125841.11 NRSN2 chr20 346782 359660 + protein_coding KNOWN OTTHUMG00000031628.4 12879 2933 40 ENSG00000101255.9 TRIB3 chr20 362835 397559 + protein_coding KNOWN OTTHUMG00000031627.4 34725 3434 18 ENSG00000229255.1 RP11-407H12.8 chr1 248484245 248485484 - lincRNA NOVEL OTTHUMG00000041417.1 1240 967 2 ENSG00000125826.18 RBCK1 chr20 407498 430966 + protein_coding KNOWN OTTHUMG00000031634.6 23469 4024 87 ENSG00000125875.12 TBC1D20 chr20 435480 462553 - protein_coding KNOWN OTTHUMG00000031637.5 27074 5831 28 ENSG00000206797.1 Y_RNA chr20 450663 450762 + misc_RNA NOVEL NA 100 100 1 ENSG00000101266.15 CSNK2A1 chr20 473591 543821 - protein_coding KNOWN OTTHUMG00000031636.5 70231 6047 93 ENSG00000125878.5 TCF15 chr20 603797 610398 - protein_coding KNOWN OTTHUMG00000031640.2 6602 1555 6 ENSG00000271303.1 SRXN1 chr20 646615 653370 - protein_coding KNOWN OTTHUMG00000031644.5 6756 2698 2 ENSG00000270299.1 RP5-850E9.3 chr20 646626 675800 - protein_coding PUTATIVE OTTHUMG00000184659.2 29175 2714 3 ENSG00000215397.3 SCRT2 chr20 661596 676179 - protein_coding KNOWN OTTHUMG00000130829.2 14584 3577 2 ENSG00000101276.13 SLC52A3 chr20 760080 768487 - protein_coding KNOWN OTTHUMG00000031647.2 8408 3445 14 ENSG00000125898.11 FAM110A chr20 833715 857463 + protein_coding KNOWN OTTHUMG00000031649.3 23749 2722 13 ENSG00000185519.8 FAM131C chr1 16057769 16073632 - protein_coding KNOWN OTTHUMG00000009525.1 15864 1701 13 ENSG00000203661.3 OR2T5 chr1 248488589 248489536 + protein_coding KNOWN OTTHUMG00000040481.1 948 948 1 ENSG00000101278.6 RPS10L chr20 839447 839977 - processed_pseudogene KNOWN OTTHUMG00000031646.4 531 531 1 ENSG00000101280.7 ANGPT4 chr20 869899 916317 - protein_coding KNOWN OTTHUMG00000031652.2 46419 4676 9 ENSG00000101282.7 RSPO4 chr20 958452 1002264 - protein_coding KNOWN OTTHUMG00000031651.3 43813 2710 9 ENSG00000125818.16 PSMF1 chr20 1113263 1189415 + protein_coding KNOWN OTTHUMG00000031656.9 76153 5296 51 ENSG00000276026.1 RP4-545L17.11 chr20 1117847 1118450 - antisense NOVEL OTTHUMG00000186544.1 604 209 2 ENSG00000215388.3 ACTG1P3 chr20 1160584 1161697 + processed_pseudogene KNOWN OTTHUMG00000031654.1 1114 1114 1 ENSG00000125895.5 TMEM74B chr20 1180561 1185415 - protein_coding KNOWN OTTHUMG00000031655.2 4855 2210 7 ENSG00000274269.1 RP4-545L17.12 chr20 1186092 1207036 + processed_transcript NOVEL OTTHUMG00000186550.1 20945 572 2 ENSG00000215595.1 C20orf202 chr20 1203454 1208274 + protein_coding KNOWN OTTHUMG00000129375.1 4821 1604 2 ENSG00000244588.4 RAD21L1 chr20 1226056 1296421 + protein_coding KNOWN OTTHUMG00000031664.7 70366 2730 34 ENSG00000271934.1 OR2AS2P chr1 248498308 248498628 + unprocessed_pseudogene KNOWN OTTHUMG00000185769.1 321 321 1 ENSG00000101298.12 SNPH chr20 1266316 1309328 + protein_coding KNOWN OTTHUMG00000031662.3 43013 5574 17 ENSG00000125775.13 SDCBP2 chr20 1309909 1329239 - protein_coding KNOWN OTTHUMG00000031661.4 19331 2653 39 ENSG00000274322.1 RP11-314N13.10 chr20 1317571 1393096 - protein_coding NOVEL OTTHUMG00000186553.2 75526 1375 11 ENSG00000280162.1 RP11-314N13.9 chr20 1320710 1324367 + TEC KNOWN OTTHUMG00000185844.1 3658 3658 1 ENSG00000234684.5 SDCBP2-AS1 chr20 1325405 1378734 + antisense NOVEL OTTHUMG00000031671.2 53330 4058 15 ENSG00000229728.1 RP11-314N13.3 chr20 1361622 1362585 + antisense NOVEL OTTHUMG00000031663.1 964 480 2 ENSG00000088832.13 FKBP1A chr20 1368978 1393172 - protein_coding KNOWN OTTHUMG00000031666.3 24195 2577 44 ENSG00000276741.1 MIR6869 chr20 1392900 1392961 - miRNA KNOWN NA 62 62 1 ENSG00000088833.16 NSFL1C chr20 1442162 1473842 - protein_coding KNOWN OTTHUMG00000031665.7 31681 6531 86 ENSG00000196209.11 SIRPB2 chr20 1470741 1491587 - protein_coding KNOWN OTTHUMG00000031670.4 20847 5034 38 ENSG00000188558.5 OR2G6 chr1 248521647 248522597 + protein_coding KNOWN OTTHUMG00000040462.1 951 951 1 ENSG00000266085.1 AL109658.1 chr20 1488550 1488647 + miRNA NOVEL NA 98 98 1 ENSG00000242324.1 RP4-576H24.2 chr20 1516759 1557653 - unprocessed_pseudogene KNOWN OTTHUMG00000031673.1 40895 1720 6 ENSG00000252103.1 RNU6-917P chr20 1529056 1529159 - snRNA KNOWN NA 104 104 1 ENSG00000125900.11 SIRPD chr20 1534251 1558843 - protein_coding KNOWN OTTHUMG00000031674.1 24593 1961 11 ENSG00000260861.5 RP4-576H24.4 chr20 1540144 1620009 - protein_coding PUTATIVE OTTHUMG00000172944.4 79866 1283 9 ENSG00000101307.14 SIRPB1 chr20 1563521 1620061 - protein_coding KNOWN OTTHUMG00000031676.9 56541 6091 58 ENSG00000271523.1 RP4-576H24.5 chr20 1591392 1591848 + processed_pseudogene KNOWN OTTHUMG00000184906.1 457 457 1 ENSG00000089012.13 SIRPG chr20 1629152 1657779 - protein_coding KNOWN OTTHUMG00000031680.4 28628 2242 31 ENSG00000237914.4 SIRPG-AS1 chr20 1633508 1648472 + antisense NOVEL OTTHUMG00000031675.2 14965 2965 7 ENSG00000223750.1 SIRPB3P chr20 1665283 1708200 - unprocessed_pseudogene KNOWN OTTHUMG00000031678.2 42918 1216 5 ENSG00000224521.1 RP11-438F14.3 chr1 248548756 248563839 + antisense NOVEL OTTHUMG00000040386.1 15084 1331 4 ENSG00000242348.3 RN7SL561P chr20 1666360 1666640 + misc_RNA KNOWN NA 281 281 1 ENSG00000236550.1 RP4-673D20.5 chr20 1676662 1676907 - unprocessed_pseudogene KNOWN OTTHUMG00000154774.1 246 246 1 ENSG00000234282.1 RP4-673D20.4 chr20 1722045 1722537 - unprocessed_pseudogene KNOWN OTTHUMG00000154773.1 493 493 1 ENSG00000271461.1 RP4-673D20.6 chr20 1756756 1758940 - processed_pseudogene KNOWN OTTHUMG00000184919.1 2185 2185 1 ENSG00000232528.3 RP4-673D20.3 chr20 1767957 1779995 - unitary_pseudogene KNOWN OTTHUMG00000154775.2 12039 1564 9 ENSG00000230839.1 RP5-968J1.1 chr20 1804016 1817606 - lincRNA NOVEL OTTHUMG00000031681.1 13591 346 4 ENSG00000280922.1 AL121760.1 chr20 1870053 1870185 + miRNA NOVEL NA 133 133 1 ENSG00000276649.1 RP5-858L17.1 chr20 1888128 1894374 - antisense NOVEL OTTHUMG00000186567.1 6247 1607 7 ENSG00000198053.10 SIRPA chr20 1894167 1940592 + protein_coding KNOWN OTTHUMG00000031682.3 46426 5068 35 ENSG00000233896.1 RP4-684O24.5 chr20 1947246 2007517 + antisense NOVEL OTTHUMG00000129569.1 60272 1802 4 ENSG00000227102.2 OR2AS1P chr1 248549444 248549762 - unprocessed_pseudogene KNOWN OTTHUMG00000040385.2 319 319 1 ENSG00000101327.7 PDYN chr20 1978757 1994285 - protein_coding KNOWN OTTHUMG00000031683.2 15529 2847 11 ENSG00000227663.1 RPL7P2 chr20 2075555 2075822 + processed_pseudogene KNOWN OTTHUMG00000031686.1 268 268 1 ENSG00000125834.11 STK35 chr20 2101611 2177038 + protein_coding KNOWN OTTHUMG00000031688.4 75428 7055 8 ENSG00000280766.1 AL121899.1 chr20 2157212 2157281 - miRNA NOVEL NA 70 70 1 ENSG00000226644.4 RP11-128M1.1 chr20 2207217 2213151 + lincRNA NOVEL OTTHUMG00000031689.1 5935 546 4 ENSG00000125780.11 TGM3 chr20 2296001 2341078 + protein_coding KNOWN OTTHUMG00000031690.2 45078 2693 17 ENSG00000166948.8 TGM6 chr20 2380908 2432753 + protein_coding KNOWN OTTHUMG00000031692.2 51846 2292 29 ENSG00000207305.1 Y_RNA chr20 2453010 2453117 - misc_RNA NOVEL NA 108 108 1 ENSG00000125835.16 SNRPB chr20 2461634 2470853 - protein_coding KNOWN OTTHUMG00000031694.4 9220 1278 31 ENSG00000256566.1 RP4-734P14.4 chr20 2467212 2508907 - protein_coding NOVEL OTTHUMG00000168016.1 41696 823 7 ENSG00000182783.4 OR2T29 chr1 248558544 248559491 - protein_coding KNOWN OTTHUMG00000040382.1 948 948 1 ENSG00000088876.10 ZNF343 chr20 2481817 2524702 - protein_coding KNOWN OTTHUMG00000031701.3 42886 4643 45 ENSG00000149488.12 TMC2 chr20 2536607 2641784 + protein_coding KNOWN OTTHUMG00000031698.3 105178 4935 26 ENSG00000101361.13 NOP56 chr20 2652145 2658393 + protein_coding KNOWN OTTHUMG00000031703.5 6249 5398 91 ENSG00000221062.1 MIR1292 chr20 2652777 2652842 + miRNA KNOWN NA 66 66 1 ENSG00000221116.1 SNORD110 chr20 2654212 2654286 + snoRNA KNOWN NA 75 75 1 ENSG00000271798.1 SNORA51 chr20 2655067 2655198 + snoRNA KNOWN NA 132 132 1 ENSG00000212498.1 SNORD86 chr20 2656097 2656182 + snoRNA KNOWN NA 86 86 1 ENSG00000229686.1 SNORD56 chr20 2656624 2656694 + snoRNA KNOWN NA 71 71 1 ENSG00000226572.1 SNORD57 chr20 2656939 2657010 + snoRNA KNOWN NA 72 72 1 ENSG00000101365.19 IDH3B chr20 2658395 2664219 - protein_coding KNOWN OTTHUMG00000031699.5 5825 2567 91 ENSG00000183310.3 OR2T34 chr1 248573801 248574757 - protein_coding KNOWN OTTHUMG00000040387.1 957 957 1 ENSG00000228293.1 RP4-686C3.7 chr20 2664352 2665874 + antisense NOVEL OTTHUMG00000031696.1 1523 872 2 ENSG00000088881.19 EBF4 chr20 2692878 2760108 + protein_coding KNOWN OTTHUMG00000031709.7 67231 3717 115 ENSG00000226217.1 RPL19P1 chr20 2780614 2781041 + processed_pseudogene KNOWN OTTHUMG00000031708.1 428 428 1 ENSG00000088882.7 CPXM1 chr20 2794069 2800637 - protein_coding KNOWN OTTHUMG00000031706.2 6569 2391 14 ENSG00000241690.3 TMEM239 chr20 2814968 2818066 + protein_coding PUTATIVE OTTHUMG00000171821.1 3099 1866 3 ENSG00000258713.2 C20orf141 chr20 2814987 2815833 + protein_coding KNOWN OTTHUMG00000031707.3 847 754 5 ENSG00000198326.9 TMEM239 chr20 2816302 2820284 + protein_coding KNOWN OTTHUMG00000031713.3 3983 3892 4 ENSG00000132635.15 PCED1A chr20 2835314 2841190 - protein_coding KNOWN OTTHUMG00000031716.7 5877 2341 34 ENSG00000215305.8 VPS16 chr20 2840703 2866732 + protein_coding KNOWN OTTHUMG00000031714.4 26030 3364 93 ENSG00000132670.19 PTPRA chr20 2864184 3039076 + protein_coding KNOWN OTTHUMG00000031718.5 174893 4469 140 ENSG00000184022.3 OR2T10 chr1 248592830 248593768 - protein_coding KNOWN OTTHUMG00000040388.1 939 939 1 ENSG00000125787.10 GNRH2 chr20 3043622 3045747 + protein_coding KNOWN OTTHUMG00000031723.2 2126 823 14 ENSG00000125901.5 MRPS26 chr20 3045945 3048254 + protein_coding KNOWN OTTHUMG00000031721.2 2310 1127 4 ENSG00000101405.3 OXT chr20 3071620 3072517 + protein_coding KNOWN OTTHUMG00000031724.2 898 513 3 ENSG00000101200.5 AVP chr20 3082556 3084724 - protein_coding KNOWN OTTHUMG00000031733.2 2169 619 3 ENSG00000263905.2 RN7SL555P chr20 3094171 3094509 + misc_RNA KNOWN NA 339 339 1 ENSG00000235958.4 UBOX5-AS1 chr20 3106913 3150867 + antisense NOVEL OTTHUMG00000031730.1 43955 2027 10 ENSG00000185019.15 UBOX5 chr20 3107573 3160196 - protein_coding KNOWN OTTHUMG00000031731.2 52624 4738 13 ENSG00000215251.3 FASTKD5 chr20 3146519 3159897 - protein_coding KNOWN OTTHUMG00000031727.2 13379 2874 2 ENSG00000088899.13 LZTS3 chr20 3162617 3173592 - protein_coding KNOWN OTTHUMG00000031735.2 10976 5395 14 ENSG00000198171.11 DDRGK1 chr20 3190350 3204685 - protein_coding KNOWN OTTHUMG00000031732.2 14336 1832 22 ENSG00000201602.1 Y_RNA chr1 248594925 248595033 - misc_RNA NOVEL NA 109 109 1 ENSG00000125877.11 ITPA chr20 3208868 3223870 + protein_coding KNOWN OTTHUMG00000031738.4 15003 2071 60 ENSG00000088836.11 SLC4A11 chr20 3227417 3239190 - protein_coding KNOWN OTTHUMG00000031740.4 11774 4081 89 ENSG00000277287.1 RP4-794I6.4 chr20 3239705 3245382 + lincRNA NOVEL OTTHUMG00000186579.1 5678 5678 1 ENSG00000088854.12 C20orf194 chr20 3249305 3407625 - protein_coding KNOWN OTTHUMG00000031742.2 158321 8541 42 ENSG00000201294.1 RNU6-1019P chr20 3360036 3360142 + snRNA KNOWN NA 107 107 1 ENSG00000226632.1 UBE2V1P1 chr20 3361880 3362324 - processed_pseudogene KNOWN OTTHUMG00000031743.1 445 445 1 ENSG00000201346.2 U3 chr20 3384229 3384440 + snoRNA NOVEL NA 212 212 1 ENSG00000266355.1 AL117334.1 chr20 3404216 3404285 + miRNA NOVEL NA 70 70 1 ENSG00000225116.1 RP11-137F15.1 chr20 3465177 3465444 - processed_pseudogene KNOWN OTTHUMG00000031744.1 268 268 1 ENSG00000088812.16 ATRN chr20 3471040 3651122 + protein_coding KNOWN OTTHUMG00000031746.2 180083 8753 54 ENSG00000271701.1 RP11-438F14.10 chr1 248601416 248601869 + processed_pseudogene KNOWN OTTHUMG00000184486.1 454 454 1 ENSG00000230568.1 SF3A3P1 chr20 3489529 3491005 - processed_pseudogene KNOWN OTTHUMG00000031745.1 1477 1477 1 ENSG00000264957.1 AL109805.1 chr20 3507007 3507112 + miRNA NOVEL NA 106 106 1 ENSG00000125861.13 GFRA4 chr20 3659292 3663399 - protein_coding KNOWN OTTHUMG00000031748.3 4108 1517 15 ENSG00000149451.16 ADAM33 chr20 3667965 3682246 - protein_coding KNOWN OTTHUMG00000031758.3 14282 5834 108 ENSG00000088827.11 SIGLEC1 chr20 3686970 3707128 - protein_coding KNOWN OTTHUMG00000031757.2 20159 7886 26 ENSG00000132622.9 HSPA12B chr20 3732667 3753111 + protein_coding KNOWN OTTHUMG00000031755.3 20445 3151 25 ENSG00000101220.16 C20orf27 chr20 3753508 3768387 - protein_coding KNOWN OTTHUMG00000031753.2 14880 2415 21 ENSG00000101222.11 SPEF1 chr20 3777504 3781448 - protein_coding KNOWN OTTHUMG00000031756.2 3945 1925 18 ENSG00000125817.7 CENPB chr20 3783851 3786690 - protein_coding KNOWN OTTHUMG00000031761.2 2840 2840 1 ENSG00000101224.16 CDC25B chr20 3786772 3806121 + protein_coding KNOWN OTTHUMG00000031764.3 19350 4314 112 ENSG00000142627.12 EPHA2 chr1 16124337 16156087 - protein_coding KNOWN OTTHUMG00000009527.2 31751 4159 27 ENSG00000279301.1 OR2T11 chr1 248626119 248627190 - polymorphic_pseudogene KNOWN OTTHUMG00000040384.1 1072 1072 2 ENSG00000275491.1 RP5-1009E24.8 chr20 3808357 3812434 + lincRNA NOVEL OTTHUMG00000186580.1 4078 843 4 ENSG00000274949.1 RP5-1009E24.9 chr20 3811384 3823882 + processed_transcript NOVEL OTTHUMG00000186581.1 12499 562 3 ENSG00000125843.9 AP5S1 chr20 3820524 3828837 + protein_coding KNOWN OTTHUMG00000031760.3 8314 5490 15 ENSG00000088888.16 MAVS chr20 3846799 3876123 + protein_coding KNOWN OTTHUMG00000031765.4 29325 11771 13 ENSG00000229539.1 RP11-119B16.2 chr20 3888239 3888868 - antisense NOVEL OTTHUMG00000031766.1 630 441 2 ENSG00000125779.20 PANK2 chr20 3888839 3929882 + protein_coding KNOWN OTTHUMG00000031768.5 41044 6698 51 ENSG00000199024.1 MIR103A2 chr20 3917494 3917571 + miRNA KNOWN NA 78 78 1 ENSG00000275582.1 RP4-681N20.5 chr20 3921279 3923400 - antisense NOVEL OTTHUMG00000186598.1 2122 669 2 ENSG00000101236.15 RNF24 chr20 3927309 4015582 - protein_coding KNOWN OTTHUMG00000031770.4 88274 7668 25 ENSG00000226608.3 FTLP3 chr20 4023917 4024444 + processed_pseudogene KNOWN OTTHUMG00000031769.2 528 528 1 ENSG00000183130.3 OR2T11 chr1 248626178 248627128 - protein_coding KNOWN NA 951 951 1 ENSG00000215063.3 RPL21P2 chr20 4059633 4060113 - processed_pseudogene KNOWN OTTHUMG00000031773.1 481 481 1 ENSG00000205300.3 RP11-352D3.2 chr20 4070152 4075165 - lincRNA NOVEL OTTHUMG00000031774.1 5014 686 3 ENSG00000088826.16 SMOX chr20 4120980 4187747 + protein_coding KNOWN OTTHUMG00000031777.4 66768 2946 65 ENSG00000230176.2 LINC01433 chr20 4193065 4195943 + antisense NOVEL OTTHUMG00000031776.2 2879 697 3 ENSG00000171873.7 ADRA1D chr20 4220631 4249074 - protein_coding KNOWN OTTHUMG00000031779.4 28444 2790 4 ENSG00000236387.1 RP11-307O10.1 chr20 4431161 4431673 - lincRNA NOVEL OTTHUMG00000031781.1 513 408 2 ENSG00000238282.1 RP5-1164C1.2 chr20 4475638 4525200 + lincRNA NOVEL OTTHUMG00000031780.1 49563 168 2 ENSG00000228210.1 RPL7AL2 chr20 4590993 4591300 - processed_pseudogene KNOWN OTTHUMG00000031782.1 308 308 1 ENSG00000226948.1 RPS4XP2 chr20 4629427 4630219 - processed_pseudogene KNOWN OTTHUMG00000031784.1 793 793 1 ENSG00000171867.15 PRNP chr20 4686236 4701590 + protein_coding KNOWN OTTHUMG00000031786.2 15355 2851 8 ENSG00000177151.3 OR2T35 chr1 248638287 248639258 - protein_coding KNOWN OTTHUMG00000040380.1 972 972 1 ENSG00000171864.4 PRND chr20 4721910 4728460 + protein_coding KNOWN OTTHUMG00000031789.2 6551 3980 2 ENSG00000180259.8 PRNT chr20 4731282 4740668 - protein_coding KNOWN OTTHUMG00000031785.3 9387 2333 6 ENSG00000231071.1 RP5-1068H6.1 chr20 4735669 4736673 - processed_pseudogene KNOWN OTTHUMG00000031783.2 1005 687 2 ENSG00000278595.1 RP5-1068H6.6 chr20 4761300 4761696 + lincRNA NOVEL OTTHUMG00000186602.1 397 397 1 ENSG00000101265.14 RASSF2 chr20 4780023 4823645 - protein_coding KNOWN OTTHUMG00000031790.2 43623 5759 32 ENSG00000089057.13 SLC23A2 chr20 4852356 5010293 - protein_coding KNOWN OTTHUMG00000031793.2 157938 7515 59 ENSG00000252096.1 SNORA31 chr20 4868984 4869118 + snoRNA NOVEL NA 135 135 1 ENSG00000234573.1 RP5-1116H23.1 chr20 5013520 5013724 - processed_pseudogene KNOWN OTTHUMG00000031792.1 205 205 1 ENSG00000277087.1 RP5-1116H23.6 chr20 5045761 5046276 - lincRNA NOVEL OTTHUMG00000186604.1 516 516 1 ENSG00000276768.1 RP5-1116H23.5 chr20 5049857 5050321 - lincRNA NOVEL OTTHUMG00000186605.1 465 465 1 ENSG00000187701.3 OR2T27 chr1 248649931 248650884 - protein_coding KNOWN OTTHUMG00000040376.1 954 954 1 ENSG00000278816.1 RP5-1116H23.4 chr20 5061037 5061340 - lincRNA NOVEL OTTHUMG00000186606.1 304 304 1 ENSG00000277425.1 RP5-1116H23.3 chr20 5066082 5068154 - lincRNA NOVEL OTTHUMG00000186607.1 2073 609 3 ENSG00000089063.13 TMEM230 chr20 5068232 5113103 - protein_coding KNOWN OTTHUMG00000031796.4 44872 3051 49 ENSG00000212536.1 RNA5SP474 chr20 5098387 5098476 - rRNA KNOWN NA 90 90 1 ENSG00000252367.1 Y_RNA chr20 5113993 5114083 - misc_RNA NOVEL NA 91 91 1 ENSG00000132646.9 PCNA chr20 5114953 5126626 - protein_coding KNOWN OTTHUMG00000031798.2 11674 1471 13 ENSG00000212517.1 SNORA26 chr20 5121417 5121539 - snoRNA NOVEL NA 123 123 1 ENSG00000101290.12 CDS2 chr20 5126786 5197887 + protein_coding KNOWN OTTHUMG00000031801.2 71102 11893 52 ENSG00000225022.1 UBE2D3P1 chr20 5292388 5292831 - processed_pseudogene KNOWN OTTHUMG00000031799.2 444 444 1 ENSG00000101292.7 PROKR2 chr20 5302040 5314369 - protein_coding KNOWN OTTHUMG00000031800.1 12330 1155 2 ENSG00000189181.4 OR14I1 chr1 248681369 248682304 - protein_coding KNOWN OTTHUMG00000040378.1 936 936 1 ENSG00000200313.1 RNA5-8SP7 chr20 5346006 5346160 - rRNA KNOWN NA 155 155 1 ENSG00000276688.1 RP5-828H9.4 chr20 5407564 5407876 + lincRNA NOVEL OTTHUMG00000186609.1 313 313 1 ENSG00000226995.6 LINC00658 chr20 5426895 5471094 - lincRNA NOVEL OTTHUMG00000031805.3 44200 2575 27 ENSG00000230563.2 RP5-828H9.1 chr20 5471207 5475182 + lincRNA NOVEL OTTHUMG00000031804.1 3976 1964 4 ENSG00000205181.5 LINC00654 chr20 5496067 5504613 - lincRNA KNOWN OTTHUMG00000031810.3 8547 6294 5 ENSG00000266908.1 RP5-1022P6.7 chr20 5499116 5502881 + lincRNA NOVEL OTTHUMG00000182079.1 3766 395 2 ENSG00000225640.1 RP5-1022P6.4 chr20 5507875 5510002 - lincRNA NOVEL OTTHUMG00000031808.1 2128 358 3 ENSG00000225831.1 RPS18P1 chr20 5532878 5533335 + processed_pseudogene KNOWN OTTHUMG00000031811.1 458 458 1 ENSG00000235820.1 RP5-1022P6.5 chr20 5533628 5535889 + antisense NOVEL OTTHUMG00000031809.1 2262 473 3 ENSG00000125772.11 GPCPD1 chr20 5544439 5611026 - protein_coding KNOWN OTTHUMG00000031806.2 66588 7446 55 ENSG00000229703.4 XX-CR54.1 chr1 248692191 248699110 + lincRNA NOVEL OTTHUMG00000153448.3 6920 609 4 ENSG00000233578.1 EIF4EP1 chr20 5548840 5549481 + processed_pseudogene KNOWN OTTHUMG00000031807.1 642 642 1 ENSG00000171984.13 C20orf196 chr20 5750393 5863912 + protein_coding KNOWN OTTHUMG00000031813.2 113520 1702 14 ENSG00000202380.1 RNU1-55P chr20 5890055 5890212 + snRNA KNOWN NA 158 158 1 ENSG00000089199.8 CHGB chr20 5911430 5925361 + protein_coding KNOWN OTTHUMG00000031821.2 13932 4535 12 ENSG00000215589.3 RP5-967N21.2 chr20 5928085 5929318 - processed_pseudogene KNOWN OTTHUMG00000031815.2 1234 1234 1 ENSG00000089195.13 TRMT6 chr20 5937235 5950558 - protein_coding KNOWN OTTHUMG00000031816.2 13324 3776 47 ENSG00000125885.12 MCM8 chr20 5950652 5998977 + protein_coding KNOWN OTTHUMG00000031822.4 48326 7691 94 ENSG00000207380.1 Y_RNA chr20 5964538 5964650 + misc_RNA NOVEL NA 113 113 1 ENSG00000231961.1 RP5-967N21.7 chr20 5965180 5965511 + processed_pseudogene KNOWN OTTHUMG00000031819.1 332 332 1 ENSG00000278719.1 MCM8-AS1 chr20 5990943 6005821 - antisense NOVEL OTTHUMG00000186611.1 14879 983 5 ENSG00000276520.1 WI2-2118C23.2 chr1 248708202 248708641 + processed_pseudogene KNOWN OTTHUMG00000187561.1 440 440 1 ENSG00000263473.2 AL035461.1 chr20 5992260 5992353 - miRNA NOVEL NA 94 94 1 ENSG00000275632.1 RP5-967N21.11 chr20 6000418 6000941 + lincRNA NOVEL OTTHUMG00000186610.1 524 524 1 ENSG00000263755.2 RN7SL498P chr20 6001733 6002030 + misc_RNA KNOWN NA 298 298 1 ENSG00000088766.10 CRLS1 chr20 6006090 6040053 + protein_coding KNOWN OTTHUMG00000031823.4 33964 5370 39 ENSG00000125872.7 LRRN4 chr20 6040778 6054049 - protein_coding KNOWN OTTHUMG00000031825.2 13272 2692 5 ENSG00000278192.1 RP5-1056H1.2 chr20 6065966 6067897 - lincRNA NOVEL OTTHUMG00000186613.1 1932 1932 1 ENSG00000101311.14 FERMT1 chr20 6074845 6123544 - protein_coding KNOWN OTTHUMG00000031826.3 48700 5359 40 ENSG00000233402.1 TARDBPP1 chr20 6200989 6202191 - processed_pseudogene KNOWN OTTHUMG00000031829.1 1203 1203 1 ENSG00000234241.1 RP4-775C13.1 chr20 6213699 6215381 + processed_pseudogene KNOWN OTTHUMG00000031830.1 1683 1683 1 ENSG00000271565.1 RP4-775C13.2 chr20 6219199 6219443 + processed_pseudogene KNOWN OTTHUMG00000184903.1 245 211 2 ENSG00000259823.4 LYPD8 chr1 248718649 248755739 - protein_coding KNOWN OTTHUMG00000174833.3 37091 2237 10 ENSG00000276915.1 RP4-775C13.3 chr20 6220330 6220759 + processed_pseudogene KNOWN OTTHUMG00000187958.1 430 430 1 ENSG00000221449.1 AL109618.1 chr20 6228794 6228948 - miRNA NOVEL NA 155 155 1 ENSG00000229876.1 CASC20 chr20 6446723 6528459 + lincRNA NOVEL OTTHUMG00000031831.1 81737 1484 3 ENSG00000228482.1 RP5-859D4.3 chr20 6731258 6736136 - lincRNA NOVEL OTTHUMG00000031832.1 4879 932 3 ENSG00000125845.6 BMP2 chr20 6767664 6780280 + protein_coding KNOWN OTTHUMG00000031833.3 12617 3601 3 ENSG00000232271.1 RP4-764O22.1 chr20 7069614 7146656 + lincRNA NOVEL OTTHUMG00000031835.1 77043 381 2 ENSG00000228888.1 LINC01428 chr20 7146467 7254202 - lincRNA NOVEL OTTHUMG00000031836.1 107736 874 8 ENSG00000238102.1 RP11-19D2.1 chr20 7256580 7258214 - lincRNA NOVEL OTTHUMG00000031837.1 1635 388 2 ENSG00000261249.1 RP11-19D2.2 chr20 7302056 7307432 - lincRNA NOVEL OTTHUMG00000175573.1 5377 1770 2 ENSG00000224711.1 RP5-988G17.1 chr20 7347467 7367632 + lincRNA NOVEL OTTHUMG00000031838.1 20166 748 3 ENSG00000242529.1 AHCYP8 chr1 248721993 248722201 - processed_pseudogene KNOWN OTTHUMG00000040381.2 209 209 1 ENSG00000278159.1 MIR8062 chr20 7371608 7371692 + miRNA KNOWN NA 85 85 1 ENSG00000240584.3 RN7SL547P chr20 7633562 7633851 - misc_RNA KNOWN NA 290 290 1 ENSG00000221726.2 AL031653.1 chr20 7696886 7696977 - miRNA NOVEL NA 92 92 1 ENSG00000215586.2 RP5-836E8.1 chr20 7831798 7832322 - processed_pseudogene KNOWN OTTHUMG00000031839.1 525 525 1 ENSG00000277315.1 RP1-209B9.2 chr20 7867327 7867614 + processed_pseudogene KNOWN OTTHUMG00000187960.1 288 288 1 ENSG00000101323.4 HAO1 chr20 7882981 7940474 - protein_coding KNOWN OTTHUMG00000031841.2 57494 1777 8 ENSG00000125827.7 TMX4 chr20 7977348 8019829 - protein_coding KNOWN OTTHUMG00000031843.4 42482 6579 27 ENSG00000229766.5 RP5-971N18.3 chr20 8019223 8043512 + antisense NOVEL OTTHUMG00000031842.2 24290 2294 15 ENSG00000226262.1 PHKBP1 chr20 8097824 8099774 - processed_pseudogene KNOWN OTTHUMG00000031845.1 1951 1951 1 ENSG00000182621.15 PLCB1 chr20 8114453 8968360 + protein_coding KNOWN OTTHUMG00000031849.9 853908 15755 312 ENSG00000229663.1 AL672296.1 chr1 248771635 248773792 - processed_pseudogene KNOWN OTTHUMG00000040383.1 2158 2158 1 ENSG00000225479.1 PLCB1-IT1 chr20 8248704 8256918 + sense_intronic NOVEL OTTHUMG00000031846.1 8215 558 4 ENSG00000222298.1 AL031655.1 chr20 8610154 8610240 - miRNA NOVEL NA 87 87 1 ENSG00000201348.1 RNU105B chr20 8831186 8831393 + snoRNA KNOWN NA 208 208 1 ENSG00000228438.1 RP5-859I17.2 chr20 8929895 8930038 - processed_pseudogene KNOWN OTTHUMG00000031848.1 144 144 1 ENSG00000276385.1 RP5-859I17.3 chr20 8934984 8935481 - processed_pseudogene KNOWN OTTHUMG00000187964.1 498 498 1 ENSG00000275222.1 Metazoa_SRP chr20 8998849 8999100 + misc_RNA NOVEL NA 252 252 1 ENSG00000101333.15 PLCB4 chr20 9068763 9481242 + protein_coding KNOWN OTTHUMG00000031853.3 412480 6900 327 ENSG00000225988.1 LAMP5-AS1 chr20 9505180 9514998 - antisense NOVEL OTTHUMG00000031850.1 9819 1928 5 ENSG00000125869.8 LAMP5 chr20 9514358 9530524 + protein_coding KNOWN OTTHUMG00000031851.3 16167 2042 11 ENSG00000101349.15 PAK7 chr20 9537389 9839041 - protein_coding KNOWN OTTHUMG00000031857.1 301653 4929 32 ENSG00000227959.1 RP11-276H7.2 chr1 16155211 16157329 + antisense NOVEL OTTHUMG00000009528.1 2119 904 2 ENSG00000175137.10 SH3BP5L chr1 248810446 248826633 - protein_coding KNOWN OTTHUMG00000040389.2 16188 6442 20 ENSG00000232738.1 RP5-986I17.2 chr20 9575608 9577689 + antisense NOVEL OTTHUMG00000031855.1 2082 465 2 ENSG00000243961.2 RP5-839B4.8 chr20 9986088 10007116 + lincRNA NOVEL OTTHUMG00000031858.1 21029 1036 2 ENSG00000132623.14 ANKEF1 chr20 9986126 10058303 + protein_coding KNOWN OTTHUMG00000031860.4 72178 5815 34 ENSG00000227906.6 SNAP25-AS1 chr20 10021978 10368776 - antisense KNOWN OTTHUMG00000031867.5 346799 5440 30 ENSG00000276525.1 Metazoa_SRP chr20 10025917 10026168 + misc_RNA NOVEL NA 252 252 1 ENSG00000230506.1 RP11-416N4.4 chr20 10173520 10196990 + lincRNA NOVEL OTTHUMG00000031862.1 23471 349 2 ENSG00000232448.1 RP11-416N4.1 chr20 10180235 10185775 + lincRNA NOVEL OTTHUMG00000031861.1 5541 446 3 ENSG00000132639.11 SNAP25 chr20 10218830 10307418 + protein_coding KNOWN OTTHUMG00000031863.3 88589 3357 26 ENSG00000237005.1 HIGD1AP15 chr20 10334419 10334698 + processed_pseudogene KNOWN OTTHUMG00000031865.2 280 280 1 ENSG00000214835.3 RPL23AP6 chr20 10349157 10349628 - processed_pseudogene KNOWN OTTHUMG00000031864.1 472 472 1 ENSG00000264500.1 MIR3124 chr1 248826377 248826443 + miRNA KNOWN NA 67 67 1 ENSG00000230750.1 SDAD1P2 chr20 10385779 10387806 + processed_pseudogene KNOWN OTTHUMG00000031870.1 2028 2028 1 ENSG00000125863.16 MKKS chr20 10401009 10434222 - protein_coding KNOWN OTTHUMG00000031868.4 33214 6953 15 ENSG00000149346.13 SLX4IP chr20 10435303 10636829 + protein_coding KNOWN OTTHUMG00000031873.5 201527 6492 12 ENSG00000235036.4 RP5-1099D15.1 chr20 10612861 10614229 - processed_pseudogene KNOWN OTTHUMG00000031874.2 1369 1369 1 ENSG00000101384.10 JAG1 chr20 10637684 10674107 - protein_coding KNOWN OTTHUMG00000031872.4 36424 8534 75 ENSG00000273745.1 MIR6870 chr20 10649636 10649695 - miRNA KNOWN NA 60 60 1 ENSG00000270792.4 RP11-103J8.1 chr20 10672928 10994924 + antisense NOVEL OTTHUMG00000185195.1 321997 1279 17 ENSG00000224961.1 RP1-278O22.1 chr20 10753090 10753966 + lincRNA NOVEL OTTHUMG00000031876.1 877 438 2 ENSG00000234900.1 RP1-278O22.2 chr20 10753278 10765286 - lincRNA NOVEL OTTHUMG00000031877.1 12009 729 3 ENSG00000232900.1 RP4-697P8.3 chr20 10875333 10909272 - lincRNA NOVEL OTTHUMG00000031880.1 33940 2006 7 ENSG00000171161.11 ZNF672 chr1 248838210 248849517 + protein_coding KNOWN OTTHUMG00000040377.2 11308 3741 29 ENSG00000217809.1 FAT1P1 chr20 10888582 10889088 - processed_pseudogene KNOWN OTTHUMG00000031878.1 507 507 1 ENSG00000270777.1 RP11-103J8.2 chr20 11001304 11001763 + lincRNA NOVEL OTTHUMG00000185231.1 460 460 1 ENSG00000125899.7 C20orf187 chr20 11027760 11029366 + lincRNA KNOWN OTTHUMG00000031881.1 1607 446 3 ENSG00000230990.1 RP4-734C18.1 chr20 11234170 11301525 - lincRNA NOVEL OTTHUMG00000031883.1 67356 1433 10 ENSG00000235544.1 RPS11P1 chr20 11345383 11345855 - processed_pseudogene KNOWN OTTHUMG00000031884.1 473 473 1 ENSG00000271397.1 RP5-1128N12.2 chr20 11608436 11609048 - processed_pseudogene KNOWN OTTHUMG00000184928.1 613 613 1 ENSG00000237256.1 PGAM3P chr20 11621051 11621477 + processed_pseudogene KNOWN OTTHUMG00000031885.1 427 427 1 ENSG00000261411.1 RP11-268G13.1 chr20 11685144 11687323 - lincRNA NOVEL OTTHUMG00000175627.1 2180 2180 1 ENSG00000228422.3 LINC00687 chr20 11800463 11870715 - lincRNA NOVEL OTTHUMG00000031887.2 70253 1078 6 ENSG00000222281.1 RN7SKP111 chr20 11818821 11819091 - misc_RNA KNOWN NA 271 271 1 ENSG00000171163.14 ZNF692 chr1 248850006 248859144 - protein_coding KNOWN OTTHUMG00000040423.2 9139 3929 166 ENSG00000271298.1 RP5-1012F16.2 chr20 11838355 11838574 + processed_pseudogene KNOWN OTTHUMG00000184901.1 220 220 1 ENSG00000132640.13 BTBD3 chr20 11890723 11926609 + protein_coding KNOWN OTTHUMG00000031889.3 35887 6228 59 ENSG00000236526.1 RP4-742J24.2 chr20 11909404 11918677 - antisense NOVEL OTTHUMG00000031890.1 9274 1831 3 ENSG00000235292.1 RP4-796I8.1 chr20 12243895 12244296 - lincRNA NOVEL OTTHUMG00000031891.1 402 280 2 ENSG00000230437.1 RP11-102J14.1 chr20 12305613 12316485 - lincRNA NOVEL OTTHUMG00000031892.1 10873 473 2 ENSG00000235698.1 PA2G4P2 chr20 12380056 12381255 + processed_pseudogene KNOWN OTTHUMG00000031893.1 1200 1200 1 ENSG00000233048.1 RP5-1069C8.2 chr20 12865202 12952519 - lincRNA NOVEL OTTHUMG00000031897.1 87318 3033 12 ENSG00000269931.1 RP5-1069C8.3 chr20 12934877 12935783 - lincRNA NOVEL OTTHUMG00000184071.1 907 907 1 ENSG00000234265.1 RP11-157E14.1 chr20 12950338 12951627 + lincRNA NOVEL OTTHUMG00000031895.1 1290 601 2 ENSG00000172296.11 SPTLC3 chr20 13008979 13169103 + protein_coding KNOWN OTTHUMG00000031899.3 160125 8520 29 ENSG00000227237.1 AL672294.1 chr1 248859164 248864796 + antisense NOVEL OTTHUMG00000040425.1 5633 462 3 ENSG00000271426.1 RP4-718P11.1 chr20 13073667 13074312 - processed_pseudogene KNOWN OTTHUMG00000184923.1 646 646 1 ENSG00000101230.5 ISM1 chr20 13221771 13300651 + protein_coding KNOWN OTTHUMG00000031902.2 78881 2593 6 ENSG00000226263.1 ISM1-AS1 chr20 13237801 13239674 - antisense NOVEL OTTHUMG00000031900.1 1874 652 3 ENSG00000225956.1 RP5-1077I2.3 chr20 13244064 13245369 - antisense NOVEL OTTHUMG00000031898.1 1306 446 2 ENSG00000278153.1 RP4-585I14.3 chr20 13368291 13368703 - lincRNA NOVEL OTTHUMG00000186699.1 413 413 1 ENSG00000089123.14 TASP1 chr20 13389392 13638940 - protein_coding KNOWN OTTHUMG00000031904.3 249549 2905 65 ENSG00000236811.1 GAPDHP2 chr20 13392677 13393674 + processed_pseudogene KNOWN OTTHUMG00000031903.1 998 998 1 ENSG00000275098.1 AL158089.1 chr20 13509635 13509744 - miRNA NOVEL NA 110 110 1 ENSG00000089048.13 ESF1 chr20 13714322 13784886 - protein_coding KNOWN OTTHUMG00000031906.1 70565 3216 25 ENSG00000101247.16 NDUFAF5 chr20 13784950 13821582 + protein_coding KNOWN OTTHUMG00000031909.7 36633 7217 107 ENSG00000185220.10 PGBD2 chr1 248906196 248919946 + protein_coding KNOWN OTTHUMG00000040424.1 13751 3651 9 ENSG00000101251.10 SEL1L2 chr20 13849247 13996443 - protein_coding KNOWN OTTHUMG00000031910.3 147197 3884 102 ENSG00000221328.1 AL117333.1 chr20 13955764 13955857 - miRNA NOVEL NA 94 94 1 ENSG00000212247.1 RNU6-278P chr20 13973316 13973424 - snRNA KNOWN NA 109 109 1 ENSG00000172264.15 MACROD2 chr20 13995369 16053197 + protein_coding KNOWN OTTHUMG00000031919.8 2057829 11344 89 ENSG00000230935.1 RPS3P1 chr20 14003508 14003699 + processed_pseudogene KNOWN OTTHUMG00000031912.1 192 192 1 ENSG00000234187.1 AIMP1P1 chr20 14127400 14128336 + processed_pseudogene KNOWN OTTHUMG00000031913.1 937 937 1 ENSG00000239923.3 RN7SL864P chr20 14223041 14223325 + misc_RNA KNOWN NA 285 285 1 ENSG00000276456.1 AL136992.1 chr20 14245042 14245139 - miRNA NOVEL NA 98 98 1 ENSG00000125848.9 FLRT3 chr20 14322988 14337616 - protein_coding KNOWN OTTHUMG00000031914.1 14629 5190 7 ENSG00000199570.1 RNU6-228P chr20 14352320 14352425 + snRNA KNOWN NA 106 106 1 ENSG00000200495.1 RNU6-1205P chr1 248912690 248912795 - snRNA KNOWN NA 106 106 1 ENSG00000227563.1 RNF11B chr20 14547184 14547623 - processed_pseudogene KNOWN OTTHUMG00000031916.1 440 440 1 ENSG00000227927.2 MACROD2-IT1 chr20 14554384 14636524 + sense_intronic KNOWN OTTHUMG00000031917.4 82141 1004 9 ENSG00000213950.2 RPS10P2 chr20 14757563 14758056 + processed_pseudogene KNOWN OTTHUMG00000031918.1 494 494 1 ENSG00000235914.1 MACROD2-AS1 chr20 14884253 14929515 - antisense KNOWN OTTHUMG00000031920.1 45263 1781 5 ENSG00000237832.1 RP5-974N19.1 chr20 14933843 14935363 - antisense NOVEL OTTHUMG00000031921.1 1521 371 3 ENSG00000199803.1 RNU6-1159P chr20 15021553 15021659 - snRNA KNOWN NA 107 107 1 ENSG00000201180.1 RNU6-115P chr20 15022852 15022958 + snRNA KNOWN NA 107 107 1 ENSG00000222500.1 RNA5SP475 chr20 15280764 15280873 - rRNA KNOWN NA 110 110 1 ENSG00000225181.1 RP11-388K2.1 chr20 15552157 15552885 - antisense NOVEL OTTHUMG00000031922.2 729 519 2 ENSG00000212111.2 AL121584.1 chr20 15558380 15558468 - miRNA NOVEL NA 89 89 1 ENSG00000233084.2 AL672183.2 chr1 248936581 248937043 + processed_pseudogene KNOWN OTTHUMG00000040422.1 463 463 1 ENSG00000224274.1 ENSAP1 chr20 15619494 15619819 - processed_pseudogene KNOWN OTTHUMG00000031923.1 326 326 1 ENSG00000225622.1 PPIAP17 chr20 16223750 16224535 - processed_pseudogene KNOWN OTTHUMG00000031926.1 786 471 2 ENSG00000089177.16 KIF16B chr20 16272104 16573433 - protein_coding KNOWN OTTHUMG00000031927.2 301330 6280 59 ENSG00000221448.1 AL118509.1 chr20 16410297 16410391 - miRNA NOVEL NA 95 95 1 ENSG00000280240.1 AL049794.1 chr20 16551149 16553012 - protein_coding KNOWN NA 1864 1864 1 ENSG00000273998.1 RP4-777L9.2 chr20 16576068 16579615 + lincRNA NOVEL OTTHUMG00000186702.1 3548 774 2 ENSG00000275728.1 RP4-777L9.3 chr20 16580258 16580622 + lincRNA NOVEL OTTHUMG00000186703.1 365 365 1 ENSG00000226229.2 RPLP0P1 chr20 16586333 16586693 - processed_pseudogene KNOWN OTTHUMG00000031929.1 361 361 1 ENSG00000200494.1 Y_RNA chr20 16670641 16670742 - misc_RNA NOVEL NA 102 102 1 ENSG00000235208.2 RPL7AL3 chr20 16684108 16684404 - processed_pseudogene KNOWN OTTHUMG00000031930.2 297 297 1 ENSG00000184731.5 FAM110C chr2 38814 46870 - protein_coding KNOWN OTTHUMG00000151321.1 8057 3968 6 ENSG00000228809.2 RP4-705D16.3 chr20 16714844 16730948 - processed_transcript NOVEL OTTHUMG00000031932.2 16105 1700 7 ENSG00000125870.9 SNRPB2 chr20 16729961 16742563 + protein_coding KNOWN OTTHUMG00000031933.3 12603 2607 17 ENSG00000125879.4 OTOR chr20 16748358 16770062 + protein_coding KNOWN OTTHUMG00000031931.3 21705 2198 10 ENSG00000236985.1 RP5-1195D24.1 chr20 16857962 16864148 - lincRNA NOVEL OTTHUMG00000031936.1 6187 833 3 ENSG00000212165.2 U3 chr20 16982831 16983033 - snoRNA NOVEL NA 203 203 1 ENSG00000251955.1 RNU6-27P chr20 17187510 17187616 + snRNA KNOWN NA 107 107 1 ENSG00000220540.1 RP1-298M8.1 chr20 17188134 17188344 + processed_pseudogene KNOWN OTTHUMG00000031937.3 211 211 1 ENSG00000238833.1 RNU1-131P chr20 17209060 17209220 + snRNA KNOWN NA 161 161 1 ENSG00000125851.8 PCSK2 chr20 17226107 17484578 + protein_coding KNOWN OTTHUMG00000031941.5 258472 7078 44 ENSG00000232241.1 DYNLT3P1 chr20 17479085 17479431 - processed_pseudogene KNOWN OTTHUMG00000031939.1 347 347 1 ENSG00000227061.1 AC079779.7 chr2 197569 202605 + antisense NOVEL OTTHUMG00000151377.1 5037 4775 2 ENSG00000125864.10 BFSP1 chr20 17493905 17569220 - protein_coding KNOWN OTTHUMG00000031940.9 75316 3226 37 ENSG00000232333.1 RPS27AP2 chr20 17516843 17517307 + processed_pseudogene KNOWN OTTHUMG00000031943.1 465 465 1 ENSG00000277373.1 RP11-462D18.4 chr20 17565501 17565851 - sense_intronic NOVEL OTTHUMG00000186704.1 351 351 1 ENSG00000125868.14 DSTN chr20 17569863 17609919 + protein_coding KNOWN OTTHUMG00000031947.9 40057 3851 14 ENSG00000202260.1 RN7SKP69 chr20 17576206 17576510 - misc_RNA KNOWN NA 305 305 1 ENSG00000230495.1 RP11-462D18.2 chr20 17599255 17599807 - processed_pseudogene KNOWN OTTHUMG00000031944.1 553 553 1 ENSG00000125844.14 RRBP1 chr20 17613678 17682295 - protein_coding KNOWN OTTHUMG00000031945.9 68618 6980 175 ENSG00000125888.13 BANF2 chr20 17693672 17735871 + protein_coding KNOWN OTTHUMG00000031949.6 42200 1358 15 ENSG00000221220.1 AL035045.1 chr20 17842583 17842728 + miRNA NOVEL NA 146 146 1 ENSG00000233625.1 RP5-905G11.3 chr20 17887363 17888160 - lincRNA NOVEL OTTHUMG00000031951.1 798 632 2 ENSG00000223181.1 RNU6-1199P chr1 758233 758336 - snRNA KNOWN NA 104 104 1 ENSG00000224621.1 RP11-276H7.3 chr1 16159266 16161883 + antisense NOVEL OTTHUMG00000035305.1 2618 544 2 ENSG00000035115.20 SH3YL1 chr2 217730 266398 - protein_coding KNOWN OTTHUMG00000151359.7 48669 11165 197 ENSG00000212555.1 RNU6-192P chr20 17903762 17903861 + snRNA KNOWN NA 100 100 1 ENSG00000089006.15 SNX5 chr20 17941597 17968980 - protein_coding KNOWN OTTHUMG00000031953.9 27384 7953 122 ENSG00000125850.9 OVOL2 chr20 17956979 18059188 - protein_coding KNOWN OTTHUMG00000031960.7 102210 2175 17 ENSG00000212232.1 SNORD17 chr20 17962710 17962946 - snoRNA KNOWN NA 237 237 1 ENSG00000125871.12 MGME1 chr20 17968913 17991122 + protein_coding KNOWN OTTHUMG00000031955.2 22210 2336 18 ENSG00000218902.3 PTMAP3 chr20 18011955 18012284 + processed_pseudogene KNOWN OTTHUMG00000031954.3 330 330 1 ENSG00000229262.1 RP4-726N1.2 chr20 18059493 18071008 + antisense NOVEL OTTHUMG00000031958.1 11516 400 2 ENSG00000227343.1 RPL15P1 chr20 18090116 18090715 - processed_pseudogene KNOWN OTTHUMG00000031959.1 600 600 1 ENSG00000252597.1 RNU7-137P chr20 18095571 18095632 - snRNA KNOWN NA 62 62 1 ENSG00000207282.1 Y_RNA chr20 18113467 18113579 - misc_RNA NOVEL NA 113 113 1 ENSG00000143727.14 ACP1 chr2 264140 278283 + protein_coding KNOWN OTTHUMG00000086933.5 14144 4160 62 ENSG00000232838.3 PET117 chr20 18137873 18143169 + protein_coding KNOWN OTTHUMG00000186019.1 5297 1141 2 ENSG00000149474.12 CSRP2BP chr20 18138118 18188387 + protein_coding KNOWN OTTHUMG00000031962.11 50270 4251 37 ENSG00000251713.1 AL050321.1 chr20 18169905 18169989 - miRNA NOVEL NA 85 85 1 ENSG00000232943.1 RP4-717M23.2 chr20 18220113 18220512 + processed_pseudogene KNOWN OTTHUMG00000031963.2 400 400 1 ENSG00000266720.2 RN7SL14P chr20 18258554 18258851 - misc_RNA KNOWN NA 298 298 1 ENSG00000252635.1 RNU2-56P chr20 18265690 18265879 - snRNA KNOWN NA 190 190 1 ENSG00000125846.14 ZNF133 chr20 18288283 18316996 + protein_coding KNOWN OTTHUMG00000031965.5 28714 5426 64 ENSG00000199719.1 RN7SKP74 chr20 18295143 18295451 - misc_RNA KNOWN NA 309 309 1 ENSG00000237259.1 RP4-568F9.3 chr20 18313765 18315111 - antisense NOVEL OTTHUMG00000031966.1 1347 258 2 ENSG00000230010.1 RP4-568F9.6 chr20 18322552 18359300 - lincRNA NOVEL OTTHUMG00000057435.1 36749 2548 10 ENSG00000189292.14 FAM150B chr2 279558 288851 - protein_coding KNOWN OTTHUMG00000151366.5 9294 2191 39 ENSG00000237282.3 LINC00851 chr20 18379049 18381484 + antisense NOVEL OTTHUMG00000057443.1 2436 734 3 ENSG00000089091.15 DZANK1 chr20 18383367 18467281 - protein_coding KNOWN OTTHUMG00000031968.6 83915 6619 166 ENSG00000236474.1 GCNT1P1 chr20 18420160 18421454 - processed_pseudogene KNOWN OTTHUMG00000031974.4 1295 1295 1 ENSG00000252422.1 RNA5SP476 chr20 18433842 18433944 + rRNA KNOWN NA 103 103 1 ENSG00000132664.10 POLR3F chr20 18467127 18484643 + protein_coding KNOWN OTTHUMG00000031971.3 17517 2928 34 ENSG00000265137.2 AL121893.2 chr20 18470604 18470715 + miRNA NOVEL NA 112 112 1 ENSG00000225419.1 RPL21P3 chr20 18485265 18486052 + processed_pseudogene KNOWN OTTHUMG00000031969.1 788 478 2 ENSG00000089050.13 RBBP9 chr20 18486540 18497243 - protein_coding KNOWN OTTHUMG00000031972.4 10704 3861 18 ENSG00000214612.3 RPS19P1 chr20 18504633 18505066 + processed_pseudogene KNOWN OTTHUMG00000031973.1 434 434 1 ENSG00000101310.13 SEC23B chr20 18507493 18561415 + protein_coding KNOWN OTTHUMG00000031976.6 53923 4039 100 ENSG00000228643.1 AC079779.4 chr2 286419 301515 + processed_transcript NOVEL OTTHUMG00000151364.1 15097 922 6 ENSG00000264134.1 AL121893.1 chr20 18545708 18545784 - miRNA NOVEL NA 77 77 1 ENSG00000232388.4 LINC00493 chr20 18567347 18569563 + protein_coding KNOWN OTTHUMG00000031978.8 2217 1098 6 ENSG00000125821.10 DTD1 chr20 18567453 18763917 + protein_coding KNOWN OTTHUMG00000031980.6 196465 3329 16 ENSG00000243702.3 RN7SL638P chr20 18592330 18592619 + misc_RNA KNOWN NA 290 290 1 ENSG00000221806.1 RNU6ATAC34P chr20 18611047 18611167 - snRNA KNOWN NA 121 121 1 ENSG00000232136.2 DUXAP7 chr20 18642782 18643634 - processed_pseudogene KNOWN OTTHUMG00000031979.3 853 689 2 ENSG00000233993.1 RP11-379J5.5 chr20 18674395 18698709 - antisense NOVEL OTTHUMG00000046204.1 24315 1695 4 ENSG00000233324.1 EEF1A1P34 chr20 18782424 18783690 - processed_pseudogene KNOWN OTTHUMG00000031987.1 1267 1267 1 ENSG00000179935.8 LINC00652 chr20 18786065 18794335 - lincRNA NOVEL OTTHUMG00000031986.4 8271 3859 12 ENSG00000273148.1 RP5-1068E13.7 chr20 18794529 18796067 + lincRNA NOVEL OTTHUMG00000186033.1 1539 1539 1 ENSG00000235779.6 AC079779.5 chr2 305111 314367 - lincRNA NOVEL OTTHUMG00000151363.5 9257 3312 94 ENSG00000149443.6 C20orf78 chr20 18809728 18830153 - sense_overlapping KNOWN OTTHUMG00000031982.4 20426 738 5 ENSG00000132631.5 SCP2D1 chr20 18813726 18814392 + protein_coding KNOWN OTTHUMG00000031983.1 667 667 1 ENSG00000274863.1 RP11-97N19.3 chr20 19000709 19056796 - lincRNA NOVEL OTTHUMG00000186706.1 56088 998 6 ENSG00000264669.1 AL136090.1 chr20 19125785 19125907 + miRNA NOVEL NA 123 123 1 ENSG00000185052.10 SLC24A3 chr20 19212646 19722937 + protein_coding KNOWN OTTHUMG00000031993.4 510292 3933 35 ENSG00000235996.1 RP11-97N19.2 chr20 19212852 19213477 - antisense NOVEL OTTHUMG00000031988.1 626 366 2 ENSG00000179447.2 RP5-1027G4.3 chr20 19242302 19284596 - antisense NOVEL OTTHUMG00000031990.1 42295 1789 8 ENSG00000216017.2 AL139429.1 chr20 19590097 19590187 - miRNA NOVEL NA 91 91 1 ENSG00000232675.6 RP4-718D20.3 chr20 19693209 19697576 - processed_transcript NOVEL OTTHUMG00000031991.3 4368 2464 19 ENSG00000239120.1 AL121761.1 chr20 19734816 19734909 - miRNA NOVEL NA 94 94 1 ENSG00000277997.1 RP11-356M6.1 chr2 307683 309424 + lincRNA NOVEL OTTHUMG00000187987.1 1742 548 2 ENSG00000268628.2 RP1-122P22.4 chr20 19756390 19758037 - lincRNA NOVEL OTTHUMG00000186707.1 1648 1648 1 ENSG00000233895.1 RP1-122P22.2 chr20 19757708 19809675 + lincRNA NOVEL OTTHUMG00000031992.1 51968 1089 7 ENSG00000236992.2 RPL12L3 chr20 19823443 19823943 - processed_pseudogene KNOWN OTTHUMG00000031995.1 501 501 1 ENSG00000275142.1 RP5-999L4.2 chr20 19871891 19872284 + lincRNA NOVEL OTTHUMG00000186709.1 394 394 1 ENSG00000132669.11 RIN2 chr20 19886521 20002457 + protein_coding KNOWN OTTHUMG00000031996.2 115937 5053 46 ENSG00000173418.10 NAA20 chr20 20017116 20033655 + protein_coding KNOWN OTTHUMG00000031998.4 16540 2376 37 ENSG00000101343.13 CRNKL1 chr20 20034368 20056046 - protein_coding KNOWN OTTHUMG00000032000.4 21679 4567 80 ENSG00000089101.16 CFAP61 chr20 20052514 20360702 + protein_coding KNOWN OTTHUMG00000032006.7 308189 7322 149 ENSG00000241054.1 RP5-1002M8.4 chr20 20094401 20095684 - antisense NOVEL OTTHUMG00000159257.1 1284 433 2 ENSG00000225417.1 RP5-1178H5.2 chr20 20214299 20215262 - antisense NOVEL OTTHUMG00000032002.1 964 282 2 ENSG00000233684.2 AC079779.6 chr2 317912 342118 + lincRNA NOVEL OTTHUMG00000151365.3 24207 1505 6 ENSG00000229500.1 RPL17P1 chr20 20253303 20253838 - processed_pseudogene KNOWN OTTHUMG00000032003.1 536 536 1 ENSG00000243810.1 RP5-1096J16.1 chr20 20258407 20267809 - antisense NOVEL OTTHUMG00000159256.1 9403 568 3 ENSG00000264879.2 RN7SL690P chr20 20316755 20316994 + misc_RNA KNOWN NA 240 240 1 ENSG00000280229.1 RP11-470C13.4 chr20 20363691 20365657 + TEC KNOWN OTTHUMG00000175631.1 1967 1967 1 ENSG00000173404.4 INSM1 chr20 20368121 20370949 + protein_coding KNOWN OTTHUMG00000032004.1 2829 2829 1 ENSG00000188559.12 RALGAPA2 chr20 20389552 20712488 - protein_coding KNOWN OTTHUMG00000032010.3 322937 11366 96 ENSG00000213384.2 EIF4E2P1 chr20 20659710 20659964 + processed_pseudogene KNOWN OTTHUMG00000032008.2 255 255 1 ENSG00000270793.1 LLPHP1 chr20 20721187 20721879 + processed_pseudogene KNOWN OTTHUMG00000184891.1 693 367 2 ENSG00000278525.1 Metazoa_SRP chr20 20738433 20738731 - misc_RNA NOVEL NA 299 299 1 ENSG00000225803.1 MRPS11P1 chr20 20854121 20854642 - processed_pseudogene KNOWN OTTHUMG00000032012.1 522 522 1 ENSG00000236856.1 AC105393.1 chr2 388412 416885 + lincRNA NOVEL OTTHUMG00000151367.1 28474 549 2 ENSG00000234104.1 RP5-1177M21.1 chr20 20970448 20972562 + lincRNA NOVEL OTTHUMG00000032013.1 2115 512 2 ENSG00000225127.2 LINC00237 chr20 21087604 21106358 - lincRNA NOVEL OTTHUMG00000032017.2 18755 1735 7 ENSG00000235065.1 RPL24P2 chr20 21114723 21115197 + processed_pseudogene KNOWN OTTHUMG00000032015.1 475 475 1 ENSG00000088970.14 KIZ chr20 21125983 21246622 + protein_coding KNOWN OTTHUMG00000032020.5 120640 5207 110 ENSG00000199509.1 RNA5SP477 chr20 21138956 21139074 - rRNA KNOWN NA 119 119 1 ENSG00000228604.3 RP5-872K7.7 chr20 21148741 21162890 - antisense NOVEL OTTHUMG00000032014.3 14150 1110 10 ENSG00000232712.5 KIZ-AS1 chr20 21154023 21218289 - antisense NOVEL OTTHUMG00000032018.3 64267 5451 21 ENSG00000214535.3 RPS15AP1 chr20 21166206 21166596 - processed_pseudogene KNOWN OTTHUMG00000032016.2 391 391 1 ENSG00000226875.1 ZNF877P chr20 21265854 21266465 + unprocessed_pseudogene KNOWN OTTHUMG00000032019.1 612 612 1 ENSG00000275457.1 RP1-198K11.5 chr20 21302731 21303704 - antisense NOVEL OTTHUMG00000186716.1 974 974 1 ENSG00000226277.1 AC105393.2 chr2 421057 422303 + lincRNA NOVEL OTTHUMG00000151358.1 1247 674 4 ENSG00000088930.7 XRN2 chr20 21303304 21389827 + protein_coding KNOWN OTTHUMG00000032025.3 86524 3437 30 ENSG00000125816.4 NKX2-4 chr20 21395367 21398028 - protein_coding KNOWN OTTHUMG00000032022.2 2662 2238 2 ENSG00000225280.5 RP11-227D2.3 chr20 21397818 21400391 + antisense NOVEL OTTHUMG00000032023.2 2574 615 5 ENSG00000223128.1 RN7SKP140 chr20 21424758 21425041 - misc_RNA KNOWN NA 284 284 1 ENSG00000226405.1 RP5-984P4.1 chr20 21488244 21488625 - processed_pseudogene KNOWN OTTHUMG00000032027.1 382 382 1 ENSG00000278041.1 RP5-984P4.6 chr20 21499261 21502934 - lincRNA NOVEL OTTHUMG00000186718.1 3674 3674 1 ENSG00000227693.1 GSTM3P1 chr20 21501395 21501968 + processed_pseudogene KNOWN OTTHUMG00000032028.1 574 574 1 ENSG00000125820.5 NKX2-2 chr20 21511010 21514026 - protein_coding KNOWN OTTHUMG00000170524.20 3017 2092 2 ENSG00000258197.1 NKX2-2-AS1 chr20 21511447 21512309 + antisense KNOWN OTTHUMG00000187950.2 863 638 2 ENSG00000233492.1 RP5-984P4.4 chr20 21530202 21530744 + lincRNA NOVEL OTTHUMG00000032029.1 543 449 2 ENSG00000223985.1 AC093326.1 chr2 490944 492655 - lincRNA NOVEL OTTHUMG00000151362.1 1712 510 2 ENSG00000279082.2 RP1-167O22.1 chr20 21569976 21619674 + lincRNA NOVEL OTTHUMG00000189116.1 49699 2180 13 ENSG00000280350.1 RP5-1065O2.4 chr20 21610787 21703585 - lincRNA NOVEL OTTHUMG00000189115.1 92799 1253 5 ENSG00000278410.1 Nkx2-2as chr20 21614978 21615435 + misc_RNA NOVEL NA 458 458 1 ENSG00000125813.12 PAX1 chr20 21705659 21718486 + protein_coding KNOWN OTTHUMG00000032034.3 12828 5855 20 ENSG00000233015.1 SLC25A6P1 chr20 21742303 21743077 - processed_pseudogene KNOWN OTTHUMG00000032031.1 775 775 1 ENSG00000227063.5 RPL41P1 chr20 21755270 21755350 + processed_pseudogene KNOWN OTTHUMG00000032033.1 81 81 1 ENSG00000238034.1 RP5-1185K9.1 chr20 21947647 21970783 + lincRNA NOVEL OTTHUMG00000032035.1 23137 569 2 ENSG00000234435.2 LINC01432 chr20 22054090 22074654 + lincRNA NOVEL OTTHUMG00000032036.2 20565 677 4 ENSG00000234862.1 RP5-1097P24.1 chr20 22220554 22223283 + lincRNA NOVEL OTTHUMG00000032037.1 2730 439 3 ENSG00000225170.2 RP5-828K20.1 chr20 22272052 22273454 - processed_pseudogene KNOWN OTTHUMG00000032038.2 1403 1403 1 ENSG00000142632.15 ARHGEF19 chr1 16197854 16212609 - protein_coding KNOWN OTTHUMG00000002219.3 14756 3745 43 ENSG00000225942.1 AC093326.2 chr2 545805 546667 + lincRNA NOVEL OTTHUMG00000151361.1 863 660 2 ENSG00000225321.1 LINC01427 chr20 22280228 22282672 - lincRNA NOVEL OTTHUMG00000032039.1 2445 504 3 ENSG00000270838.1 RP5-1004I9.2 chr20 22343693 22343930 - processed_pseudogene KNOWN OTTHUMG00000184926.1 238 238 1 ENSG00000204684.2 RP5-1004I9.1 chr20 22400351 22420643 - lincRNA NOVEL OTTHUMG00000032040.3 20293 1666 4 ENSG00000259974.2 LINC00261 chr20 22547671 22578642 - lincRNA KNOWN OTTHUMG00000046240.2 30972 5552 10 ENSG00000125798.13 FOXA2 chr20 22581005 22585455 - protein_coding KNOWN OTTHUMG00000032041.2 4451 2603 5 ENSG00000237396.1 LINC01384 chr20 22587522 22607517 - lincRNA NOVEL OTTHUMG00000032044.1 19996 659 3 ENSG00000230400.1 RP11-359G22.2 chr20 22676072 22685344 - lincRNA NOVEL OTTHUMG00000032047.1 9273 2781 5 ENSG00000215553.3 KRT18P3 chr20 22732802 22734089 - processed_pseudogene KNOWN OTTHUMG00000032046.1 1288 1288 1 ENSG00000265151.1 AL158175.1 chr20 22733210 22733301 - miRNA NOVEL NA 92 92 1 ENSG00000213882.2 CYB5P4 chr20 22885670 22886068 - processed_pseudogene KNOWN OTTHUMG00000032048.1 399 399 1 ENSG00000233633.1 AC093326.3 chr2 558204 578145 + lincRNA NOVEL OTTHUMG00000151360.1 19942 762 5 ENSG00000228935.1 RP11-189G24.2 chr20 22960534 22966063 - processed_pseudogene KNOWN OTTHUMG00000032049.1 5530 2043 4 ENSG00000230492.1 RP4-753D10.5 chr20 23010209 23030785 - antisense NOVEL OTTHUMG00000032052.1 20577 719 4 ENSG00000234646.4 RP4-753D10.3 chr20 23031542 23039236 + sense_overlapping NOVEL OTTHUMG00000032051.1 7695 533 5 ENSG00000132671.5 SSTR4 chr20 23035386 23036812 + protein_coding KNOWN OTTHUMG00000032054.1 1427 1427 1 ENSG00000178726.6 THBD chr20 23045633 23049741 - protein_coding KNOWN OTTHUMG00000032053.2 4109 4109 1 ENSG00000279447.1 RP4-737E23.6 chr20 23071547 23072722 - TEC KNOWN OTTHUMG00000175626.1 1176 1176 1 ENSG00000125810.9 CD93 chr20 23079349 23086340 - protein_coding KNOWN OTTHUMG00000032058.2 6992 6708 2 ENSG00000233746.1 LINC00656 chr20 23125068 23132621 - lincRNA NOVEL OTTHUMG00000133099.1 7554 1896 4 ENSG00000279164.1 RP4-737E23.5 chr20 23148086 23149939 + TEC KNOWN OTTHUMG00000175579.1 1854 1854 1 ENSG00000201527.1 RNA5SP478 chr20 23160857 23160971 - rRNA KNOWN NA 115 115 1 ENSG00000151353.13 TMEM18 chr2 667335 677439 - protein_coding KNOWN OTTHUMG00000151381.1 10105 5044 32 ENSG00000275179.1 RP4-737E23.7 chr20 23180176 23187544 + lincRNA NOVEL OTTHUMG00000186735.1 7369 673 4 ENSG00000230387.2 RP4-737E23.2 chr20 23187961 23190307 + lincRNA NOVEL OTTHUMG00000032057.2 2347 2347 3 ENSG00000277901.1 RP5-851M4.1 chr20 23320958 23325352 - lincRNA NOVEL OTTHUMG00000186736.1 4395 431 4 ENSG00000234832.1 RP3-322G13.7 chr20 23346941 23351486 - antisense NOVEL OTTHUMG00000032064.1 4546 814 2 ENSG00000132661.3 NXT1 chr20 23350736 23354777 + protein_coding KNOWN OTTHUMG00000032059.2 4042 1123 2 ENSG00000232645.4 LINC01431 chr20 23356594 23358116 - lincRNA NOVEL OTTHUMG00000032063.1 1523 841 8 ENSG00000125812.14 GZF1 chr20 23362182 23373063 + protein_coding KNOWN OTTHUMG00000032069.2 10882 5463 18 ENSG00000125814.16 NAPB chr20 23374519 23421519 - protein_coding KNOWN OTTHUMG00000032062.2 47001 5234 61 ENSG00000201728.1 RNA5SP479 chr20 23380896 23381012 - rRNA KNOWN NA 117 117 1 ENSG00000125823.11 CSTL1 chr20 23439685 23444930 + protein_coding KNOWN OTTHUMG00000032068.1 5246 1073 16 ENSG00000233296.1 AC092159.2 chr2 677186 697371 + antisense NOVEL OTTHUMG00000151378.1 20186 2298 6 ENSG00000125831.8 CST11 chr20 23450403 23452857 - protein_coding KNOWN OTTHUMG00000032060.2 2455 566 5 ENSG00000200208.1 Y_RNA chr20 23457584 23457685 - misc_RNA NOVEL NA 102 102 1 ENSG00000273838.1 RP3-333B15.5 chr20 23458529 23459459 + lincRNA NOVEL OTTHUMG00000186737.1 931 530 2 ENSG00000226344.1 CST12P chr20 23475700 23479798 + unitary_pseudogene KNOWN OTTHUMG00000032072.3 4099 362 3 ENSG00000260202.2 RP3-333B15.4 chr20 23481645 23519054 - lincRNA NOVEL OTTHUMG00000175576.2 37410 2290 3 ENSG00000276638.1 RP3-333B15.6 chr20 23489416 23489973 - lincRNA NOVEL OTTHUMG00000186738.1 558 558 1 ENSG00000125815.7 CST8 chr20 23491101 23496018 + protein_coding KNOWN OTTHUMG00000032071.2 4918 918 8 ENSG00000204663.8 CST13P chr20 23519146 23542018 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000032078.2 22873 1157 11 ENSG00000204662.2 CST9LP1 chr20 23547764 23550652 - unprocessed_pseudogene KNOWN OTTHUMG00000032079.1 2889 444 3 ENSG00000101435.4 CST9L chr20 23564732 23568749 - protein_coding KNOWN OTTHUMG00000032073.1 4018 959 3 ENSG00000280360.1 AC092159.1 chr2 687799 688348 + protein_coding KNOWN NA 550 550 1 ENSG00000204658.5 RP11-218C14.2 chr20 23583645 23586510 + unprocessed_pseudogene KNOWN OTTHUMG00000032075.1 2866 320 3 ENSG00000173335.4 CST9 chr20 23602410 23605876 - protein_coding KNOWN OTTHUMG00000032076.1 3467 1592 2 ENSG00000101439.7 CST3 chr20 23626706 23638473 - protein_coding KNOWN OTTHUMG00000032080.3 11768 3695 11 ENSG00000270001.1 RP11-218C14.8 chr20 23631826 23632316 - lincRNA NOVEL OTTHUMG00000184119.1 491 491 1 ENSG00000225056.1 RP11-218C14.5 chr20 23655225 23656390 - lincRNA NOVEL OTTHUMG00000032077.1 1166 436 2 ENSG00000101441.4 CST4 chr20 23685640 23689040 - protein_coding KNOWN OTTHUMG00000032083.2 3401 751 3 ENSG00000232595.1 CST2P1 chr20 23711320 23711406 - unprocessed_pseudogene KNOWN OTTHUMG00000032084.1 87 87 1 ENSG00000170373.7 CST1 chr20 23747553 23751268 - protein_coding KNOWN OTTHUMG00000032085.2 3716 872 7 ENSG00000277975.1 XXyac-YX60D10.2 chr20 23772785 23776169 - unprocessed_pseudogene KNOWN OTTHUMG00000187965.2 3385 398 3 ENSG00000230908.1 XXyac-YX60D10.1 chr20 23798141 23805663 + antisense NOVEL OTTHUMG00000133141.1 7523 797 4 ENSG00000233970.1 AC092159.3 chr2 692083 693235 - antisense NOVEL OTTHUMG00000151375.1 1153 571 2 ENSG00000170369.3 CST2 chr20 23823769 23826731 - protein_coding KNOWN OTTHUMG00000032086.2 2963 748 3 ENSG00000170367.4 CST5 chr20 23875935 23879750 - protein_coding KNOWN OTTHUMG00000032089.2 3816 756 3 ENSG00000228476.1 CSTP1 chr20 23918771 23922169 - unprocessed_pseudogene KNOWN OTTHUMG00000032091.1 3399 419 3 ENSG00000236168.1 RP5-831C21.1 chr20 23980585 23980734 - unprocessed_pseudogene KNOWN OTTHUMG00000032094.2 150 150 1 ENSG00000149435.11 GGTLC1 chr20 23985050 23988779 - protein_coding KNOWN OTTHUMG00000032095.3 3730 1279 17 ENSG00000167390.8 POM121L3P chr20 23989292 23990454 + processed_pseudogene KNOWN OTTHUMG00000032093.3 1163 1163 1 ENSG00000236151.1 RP5-1100I6.1 chr20 24142590 24144386 - lincRNA NOVEL OTTHUMG00000032097.1 1797 534 2 ENSG00000230133.1 FLJ33581 chr20 24199767 24224588 + lincRNA NOVEL OTTHUMG00000032098.1 24822 2376 4 ENSG00000200231.1 RNU1-23P chr20 24237255 24237398 + snRNA KNOWN NA 144 144 1 ENSG00000232200.2 RP4-564O4.1 chr20 24297585 24318086 - lincRNA NOVEL OTTHUMG00000032099.2 20502 602 5 ENSG00000227713.1 AC116609.1 chr2 724966 731224 - lincRNA NOVEL OTTHUMG00000151379.1 6259 706 4 ENSG00000234069.1 GAPDHP53 chr20 24445391 24446314 + processed_pseudogene KNOWN OTTHUMG00000032100.1 924 924 1 ENSG00000101463.5 SYNDIG1 chr20 24469199 24666616 + protein_coding KNOWN OTTHUMG00000032104.1 197418 2847 6 ENSG00000228539.1 RP11-526K17.2 chr20 24491472 24502345 - antisense NOVEL OTTHUMG00000032101.1 10874 823 3 ENSG00000231015.1 RP5-860P4.2 chr20 24679547 24680991 + lincRNA NOVEL OTTHUMG00000032103.1 1445 805 2 ENSG00000274173.1 RP4-568C11.4 chr20 24931840 24932983 + lincRNA NOVEL OTTHUMG00000186741.1 1144 1144 1 ENSG00000077984.5 CST7 chr20 24949230 24959928 + protein_coding KNOWN OTTHUMG00000032108.2 10699 930 4 ENSG00000101474.10 APMAP chr20 24962925 24992979 - protein_coding KNOWN OTTHUMG00000032107.2 30055 2454 19 ENSG00000207355.1 RNU6-1257P chr20 24974171 24974280 + snRNA KNOWN NA 110 110 1 ENSG00000154930.13 ACSS1 chr20 25006230 25058980 - protein_coding KNOWN OTTHUMG00000032112.2 52751 8691 44 ENSG00000275358.1 RP5-1025A1.3 chr20 25062962 25063591 - lincRNA NOVEL OTTHUMG00000186742.1 630 630 1 ENSG00000272342.1 RP13-539J13.1 chr2 739588 740164 - lincRNA NOVEL OTTHUMG00000185487.1 577 577 1 ENSG00000100987.13 VSX1 chr20 25070885 25082365 - protein_coding KNOWN OTTHUMG00000032111.6 11481 3849 30 ENSG00000225069.3 RP5-1025A1.2 chr20 25099105 25099928 + processed_pseudogene KNOWN OTTHUMG00000133192.1 824 824 1 ENSG00000230725.4 RP4-738P15.1 chr20 25140789 25149258 - lincRNA NOVEL OTTHUMG00000032113.1 8470 3379 13 ENSG00000225344.1 RP4-738P15.4 chr20 25161167 25162061 - processed_pseudogene KNOWN OTTHUMG00000032115.2 895 895 1 ENSG00000197586.11 ENTPD6 chr20 25195693 25226729 + protein_coding KNOWN OTTHUMG00000032116.2 31037 5327 152 ENSG00000202414.1 Y_RNA chr20 25214698 25214798 + misc_RNA NOVEL NA 101 101 1 ENSG00000279322.1 RP4-738P15.6 chr20 25226448 25226735 - TEC KNOWN OTTHUMG00000187305.1 288 288 1 ENSG00000277938.1 RP5-965G21.3 chr20 25229150 25231933 + lincRNA NOVEL OTTHUMG00000186743.1 2784 2784 1 ENSG00000274414.1 RP5-965G21.4 chr20 25239007 25245229 - lincRNA NOVEL OTTHUMG00000186744.1 6223 2335 2 ENSG00000100994.10 PYGB chr20 25248069 25298014 + protein_coding KNOWN OTTHUMG00000032117.2 49946 4474 29 ENSG00000231173.1 AC116609.3 chr2 741977 749856 + lincRNA NOVEL OTTHUMG00000151376.1 7880 256 2 ENSG00000274507.1 RP5-965G21.5 chr20 25251008 25251304 - antisense NOVEL OTTHUMG00000186745.1 297 297 1 ENSG00000276952.1 RP5-965G21.6 chr20 25284915 25285588 - antisense NOVEL OTTHUMG00000186746.1 674 674 1 ENSG00000100997.17 ABHD12 chr20 25294743 25390983 - protein_coding KNOWN OTTHUMG00000032121.3 96241 3429 68 ENSG00000227379.2 PPIAP2 chr20 25368275 25368766 - processed_pseudogene KNOWN OTTHUMG00000032123.1 492 492 1 ENSG00000101003.9 GINS1 chr20 25407727 25452628 + protein_coding KNOWN OTTHUMG00000032124.1 44902 4068 17 ENSG00000101004.13 NINL chr20 25452705 25585517 - protein_coding KNOWN OTTHUMG00000032127.4 132813 6008 65 ENSG00000251883.1 RNU6ATAC17P chr20 25611153 25611223 + snRNA KNOWN NA 71 71 1 ENSG00000170191.4 NANP chr20 25612935 25624175 - protein_coding KNOWN OTTHUMG00000032132.2 11241 3964 2 ENSG00000213742.5 ZNF337-AS1 chr20 25624045 25678074 + antisense NOVEL OTTHUMG00000032129.1 54030 5308 30 ENSG00000242236.2 RN7SL594P chr20 25654595 25654881 - misc_RNA KNOWN NA 287 287 1 ENSG00000223751.1 AC116609.2 chr2 742488 747767 + lincRNA NOVEL OTTHUMG00000151380.1 5280 535 2 ENSG00000236542.1 MED28P7 chr20 25669857 25670386 - processed_pseudogene KNOWN OTTHUMG00000032128.1 530 530 1 ENSG00000130684.12 ZNF337 chr20 25674215 25696841 - protein_coding KNOWN OTTHUMG00000032131.2 22627 3823 14 ENSG00000278383.1 RP4-694B14.8 chr20 25680781 25681246 + antisense NOVEL OTTHUMG00000186747.1 466 466 1 ENSG00000230772.1 VN1R108P chr20 25734264 25735093 + unprocessed_pseudogene KNOWN OTTHUMG00000032139.1 830 830 1 ENSG00000226465.1 RP13-401N8.1 chr20 25751218 25752761 + antisense NOVEL OTTHUMG00000032135.1 1544 320 2 ENSG00000175170.13 FAM182B chr20 25763466 25868225 - protein_coding KNOWN OTTHUMG00000032136.6 104760 3854 29 ENSG00000275048.1 RP13-401N8.6 chr20 25783553 25783919 + processed_pseudogene KNOWN OTTHUMG00000187967.1 367 367 1 ENSG00000250090.1 RP13-401N8.3 chr20 25835985 25836832 - unprocessed_pseudogene KNOWN OTTHUMG00000032137.1 848 222 2 ENSG00000274973.1 RP13-401N8.7 chr20 25845497 25845862 + processed_pseudogene KNOWN OTTHUMG00000187970.1 366 366 1 ENSG00000228593.1 CFTRP1 chr20 25919499 25919681 - unprocessed_pseudogene KNOWN OTTHUMG00000032142.2 183 183 1 ENSG00000234166.1 ARHGEF19-AS1 chr1 16197854 16198357 + antisense NOVEL OTTHUMG00000002220.1 504 439 2 ENSG00000237667.4 LINC01115 chr2 779840 868426 - lincRNA NOVEL OTTHUMG00000151368.2 88587 1519 7 ENSG00000226203.1 RP4-760C5.5 chr20 25955812 25969288 + lincRNA NOVEL OTTHUMG00000150168.1 13477 4604 4 ENSG00000231081.1 RP4-760C5.3 chr20 26008791 26010531 - lincRNA NOVEL OTTHUMG00000032141.1 1741 542 2 ENSG00000204556.4 CTD-2514C3.1 chr20 26018832 26020684 + unprocessed_pseudogene KNOWN OTTHUMG00000032143.1 1853 353 4 ENSG00000125804.12 FAM182A chr20 26054655 26086917 + processed_transcript KNOWN OTTHUMG00000032144.2 32263 5787 19 ENSG00000277508.1 RP13-401N8.8 chr20 26071988 26072351 - processed_pseudogene KNOWN OTTHUMG00000187972.1 364 364 1 ENSG00000240108.1 NCOR1P1 chr20 26103416 26114028 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000032145.2 10613 406 4 ENSG00000230440.1 RP13-329D4.3 chr20 26132887 26134198 - lincRNA NOVEL OTTHUMG00000032148.1 1312 271 2 ENSG00000227195.7 MIR663AHG chr20 26186920 26251526 - processed_transcript NOVEL OTTHUMG00000032149.4 64607 5252 181 ENSG00000238129.4 RP3-410C9.2 chr20 26188408 26196891 + lincRNA NOVEL OTTHUMG00000032150.2 8484 1352 6 ENSG00000273684.1 MIR663A chr20 26208186 26208278 - miRNA KNOWN NA 93 93 1 ENSG00000228799.4 AC113607.2 chr2 900216 905451 - lincRNA NOVEL OTTHUMG00000151369.1 5236 759 7 ENSG00000204555.2 CFTRP3 chr20 30214798 30214976 - processed_pseudogene KNOWN OTTHUMG00000032151.1 179 179 1 ENSG00000205611.3 RP4-610C12.4 chr20 30278906 30286537 - lincRNA NOVEL OTTHUMG00000133197.1 7632 3328 2 ENSG00000225490.1 RP4-610C12.3 chr20 30286961 30288311 - lincRNA NOVEL OTTHUMG00000032152.1 1351 553 2 ENSG00000200325.1 Y_RNA chr20 30309015 30309126 - misc_RNA NOVEL NA 112 112 1 ENSG00000231934.1 RP4-610C12.1 chr20 30323812 30361730 - antisense NOVEL OTTHUMG00000032154.3 37919 1035 8 ENSG00000149531.13 FRG1B chr20 30377181 30399334 + protein_coding KNOWN OTTHUMG00000032157.5 22154 1741 28 ENSG00000221319.1 AL441988.1 chr20 30402486 30402624 + miRNA NOVEL NA 139 139 1 ENSG00000238151.1 MLLT10P1 chr20 30403123 30403384 - processed_pseudogene KNOWN OTTHUMG00000032156.1 262 262 1 ENSG00000275877.1 5_8S_rRNA chr20 30484925 30485076 - rRNA NOVEL NA 152 152 1 ENSG00000276990.1 AC018688.1 chr20 30488745 30488859 - miRNA NOVEL NA 115 115 1 ENSG00000234796.1 AC113607.3 chr2 910926 921124 - antisense NOVEL OTTHUMG00000151371.1 10199 589 2 ENSG00000275707.2 AC092107.1 chr20 30626926 30627002 + miRNA NOVEL NA 77 77 1 ENSG00000277112.2 RP11-755J8.1 chr20 30681825 30723932 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000189351.1 42108 2610 17 ENSG00000274385.1 U6 chr20 30713240 30713346 - snRNA NOVEL NA 107 107 1 ENSG00000275305.1 5S_rRNA chr20 30816156 30816274 - rRNA NOVEL NA 119 119 1 ENSG00000276939.1 AC104301.1 chr20 30842322 30842404 + miRNA NOVEL NA 83 83 1 ENSG00000277204.1 AC104301.2 chr20 30901749 30901821 - miRNA NOVEL NA 73 73 1 ENSG00000215547.1 DEFB115 chr20 31257664 31259632 + protein_coding KNOWN OTTHUMG00000159284.1 1969 267 2 ENSG00000215546.2 DKKL1P1 chr20 31274170 31274867 + processed_pseudogene KNOWN OTTHUMG00000032158.1 698 698 1 ENSG00000224628.2 RP5-854E16.2 chr20 31285317 31286835 - processed_pseudogene KNOWN OTTHUMG00000032162.2 1519 1519 1 ENSG00000215545.1 DEFB116 chr20 31303212 31308585 - protein_coding KNOWN OTTHUMG00000159285.1 5374 309 2 ENSG00000235688.1 AC116614.1 chr2 949634 950274 - antisense NOVEL OTTHUMG00000151389.1 641 532 2 ENSG00000237929.1 RPL31P3 chr20 31311303 31311962 - processed_pseudogene KNOWN OTTHUMG00000032160.1 660 332 2 ENSG00000236121.1 HAUS6P2 chr20 31341371 31344471 - processed_pseudogene KNOWN OTTHUMG00000032159.1 3101 2404 4 ENSG00000252649.1 RNA5SP480 chr20 31356870 31356978 + rRNA KNOWN NA 109 109 1 ENSG00000212717.3 DEFB117 chr20 31360790 31360930 + processed_pseudogene KNOWN OTTHUMG00000184006.1 141 141 1 ENSG00000131068.3 DEFB118 chr20 31368618 31373923 + protein_coding KNOWN OTTHUMG00000032161.2 5306 1158 2 ENSG00000212134.1 SNORA40 chr20 31376319 31376446 + snoRNA NOVEL NA 128 128 1 ENSG00000180483.6 DEFB119 chr20 31377164 31390603 - protein_coding KNOWN OTTHUMG00000032172.2 13440 797 11 ENSG00000204548.3 DEFB121 chr20 31404845 31412838 - protein_coding KNOWN OTTHUMG00000032171.2 7994 630 4 ENSG00000204547.7 DEFB122 chr20 31421436 31429180 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000032169.2 7745 547 5 ENSG00000180424.6 DEFB123 chr20 31440519 31450257 + protein_coding KNOWN OTTHUMG00000032170.2 9739 467 2 ENSG00000172554.10 SNTG2 chr2 950868 1367613 + protein_coding KNOWN OTTHUMG00000151370.4 416746 4469 79 ENSG00000180383.3 DEFB124 chr20 31465506 31476757 - protein_coding KNOWN OTTHUMG00000159287.1 11252 729 4 ENSG00000088320.3 REM1 chr20 31475293 31484905 + protein_coding KNOWN OTTHUMG00000032168.2 9613 1665 5 ENSG00000233354.1 LINC00028 chr20 31485778 31487574 + lincRNA KNOWN OTTHUMG00000032166.3 1797 587 4 ENSG00000101294.15 HM13 chr20 31514428 31577923 + protein_coding KNOWN OTTHUMG00000032175.6 63496 10000 159 ENSG00000274364.1 RP3-324O17.7 chr20 31535263 31535626 + sense_intronic NOVEL OTTHUMG00000186752.1 364 364 1 ENSG00000101898.5 MCTS2P chr20 31547504 31548049 + processed_pseudogene KNOWN OTTHUMG00000032177.1 546 546 1 ENSG00000235313.1 HM13-IT1 chr20 31563166 31564076 + sense_intronic NOVEL OTTHUMG00000046194.1 911 356 2 ENSG00000230613.1 HM13-AS1 chr20 31567707 31573263 - antisense NOVEL OTTHUMG00000032176.1 5557 489 3 ENSG00000278276.1 RP3-324O17.8 chr20 31580890 31581214 + lincRNA NOVEL OTTHUMG00000186756.1 325 325 1 ENSG00000201770.1 RNU6-384P chr20 31581089 31581192 + snRNA KNOWN NA 104 104 1 ENSG00000235403.1 AC114808.3 chr2 1059133 1068341 - antisense NOVEL OTTHUMG00000151390.1 9209 432 2 ENSG00000125968.8 ID1 chr20 31605283 31606515 + protein_coding KNOWN OTTHUMG00000032181.1 1233 1233 3 ENSG00000264395.1 MIR3193 chr20 31607186 31607240 + miRNA KNOWN NA 55 55 1 ENSG00000131055.4 COX4I2 chr20 31637888 31645006 + protein_coding KNOWN OTTHUMG00000032180.1 7119 693 9 ENSG00000171552.11 BCL2L1 chr20 31664452 31723989 - protein_coding KNOWN OTTHUMG00000032192.2 59538 3314 21 ENSG00000236559.1 RP11-243J16.7 chr20 31686216 31716825 + antisense NOVEL OTTHUMG00000032185.2 30610 374 2 ENSG00000281376.1 ABALON chr20 31721507 31723409 + antisense KNOWN OTTHUMG00000189574.1 1903 1903 1 ENSG00000088325.14 TPX2 chr20 31739271 31801805 + protein_coding KNOWN OTTHUMG00000032190.2 62535 3605 37 ENSG00000230801.1 RP11-243J16.8 chr20 31808503 31808749 - processed_pseudogene KNOWN OTTHUMG00000032187.1 247 247 1 ENSG00000101306.9 MYLK2 chr20 31819308 31834689 + protein_coding KNOWN OTTHUMG00000032194.2 15382 2976 31 ENSG00000179772.7 FOXS1 chr20 31844301 31845619 - protein_coding KNOWN OTTHUMG00000032183.2 1319 1319 1 ENSG00000236665.1 AC114808.2 chr2 1158310 1160424 - antisense NOVEL OTTHUMG00000151387.1 2115 536 3 ENSG00000149599.14 DUSP15 chr20 31847637 31870747 - protein_coding KNOWN OTTHUMG00000032182.6 23111 3791 63 ENSG00000131044.15 TTLL9 chr20 31870702 31944963 + protein_coding KNOWN OTTHUMG00000186843.2 74262 5925 142 ENSG00000199497.1 RNU1-94P chr20 31901254 31901426 + snRNA KNOWN NA 173 173 1 ENSG00000088356.5 PDRG1 chr20 31944342 31952092 - protein_coding KNOWN OTTHUMG00000032196.3 7751 1998 5 ENSG00000260903.2 XKR7 chr20 31968002 32003387 + protein_coding KNOWN OTTHUMG00000032198.3 35386 7844 3 ENSG00000278012.1 RP1-310O13.13 chr20 31970181 31970831 + sense_intronic NOVEL OTTHUMG00000186867.1 651 651 1 ENSG00000252623.1 RNA5SP481 chr20 32008351 32008472 + rRNA KNOWN NA 122 122 1 ENSG00000101331.14 CCM2L chr20 32010450 32032180 + protein_coding KNOWN OTTHUMG00000032197.2 21731 2587 15 ENSG00000226239.1 RP1-310O13.7 chr20 32027753 32031575 - antisense NOVEL OTTHUMG00000032202.1 3823 2013 2 ENSG00000212571.1 RNA5SP482 chr20 32050588 32050705 + rRNA KNOWN NA 118 118 1 ENSG00000233553.1 AC108462.1 chr2 1341044 1346568 - antisense NOVEL OTTHUMG00000151388.1 5525 850 2 ENSG00000101336.11 HCK chr20 32052188 32101856 + protein_coding KNOWN OTTHUMG00000032204.6 49669 3092 123 ENSG00000101337.14 TM9SF4 chr20 32109506 32167258 + protein_coding KNOWN OTTHUMG00000032206.5 57753 5415 57 ENSG00000275576.1 RP5-836N17.4 chr20 32116171 32116629 + sense_intronic NOVEL OTTHUMG00000186868.1 459 459 1 ENSG00000265736.1 AL049539.1 chr20 32118654 32118751 - miRNA NOVEL NA 98 98 1 ENSG00000224452.1 RSL24D1P6 chr20 32170390 32170790 - processed_pseudogene KNOWN OTTHUMG00000032207.1 401 401 1 ENSG00000235217.6 TSPY26P chr20 32186477 32190527 - transcribed_processed_pseudogene KNOWN OTTHUMG00000032212.2 4051 4051 2 ENSG00000126003.6 PLAGL2 chr20 32192503 32207791 - protein_coding KNOWN OTTHUMG00000032210.2 15289 5705 3 ENSG00000101346.10 POFUT1 chr20 32207880 32238667 + protein_coding KNOWN OTTHUMG00000133268.2 30788 6426 23 ENSG00000221667.1 MIR1825 chr20 32237795 32237847 + miRNA KNOWN NA 53 53 1 ENSG00000101350.7 KIF3B chr20 32277664 32335011 + protein_coding KNOWN OTTHUMG00000032214.1 57348 6103 9 ENSG00000115705.19 TPO chr2 1374223 1543711 + protein_coding KNOWN OTTHUMG00000090271.8 169489 6841 140 ENSG00000264308.1 AL121897.1 chr20 32277700 32277788 - miRNA NOVEL NA 89 89 1 ENSG00000277692.1 RP11-358N2.2 chr20 32355053 32355734 + lincRNA NOVEL OTTHUMG00000186870.1 682 682 1 ENSG00000171456.15 ASXL1 chr20 32358344 32439319 + protein_coding KNOWN OTTHUMG00000032218.6 80976 9454 87 ENSG00000197183.11 NOL4L chr20 32443059 32585074 - protein_coding KNOWN OTTHUMG00000032219.3 142016 9448 61 ENSG00000236772.1 RP5-1184F4.5 chr20 32449755 32453607 + antisense NOVEL OTTHUMG00000032217.1 3853 986 4 ENSG00000277301.1 RP5-1184F4.7 chr20 32509959 32520285 + antisense NOVEL OTTHUMG00000186874.1 10327 1771 3 ENSG00000233293.1 RP11-410N8.3 chr20 32561093 32573888 + antisense NOVEL OTTHUMG00000032221.1 12796 469 3 ENSG00000204393.6 RP11-410N8.4 chr20 32564992 32608893 + lincRNA NOVEL OTTHUMG00000032222.1 43902 870 6 ENSG00000228156.1 RP11-410N8.1 chr20 32581963 32593900 + antisense NOVEL OTTHUMG00000032220.1 11938 370 2 ENSG00000198547.7 C20orf203 chr20 32631652 32673941 - lincRNA NOVEL OTTHUMG00000032224.3 42290 5076 9 ENSG00000228613.1 AC144450.1 chr2 1546665 1620113 - antisense NOVEL OTTHUMG00000151383.1 73449 786 3 ENSG00000175730.8 BAK1P1 chr20 32690180 32690815 - processed_pseudogene KNOWN OTTHUMG00000158163.1 636 636 1 ENSG00000149600.10 COMMD7 chr20 32702691 32743997 - protein_coding KNOWN OTTHUMG00000032229.3 41307 2584 34 ENSG00000088305.17 DNMT3B chr20 32762385 32809356 + protein_coding KNOWN OTTHUMG00000032226.4 46972 4630 124 ENSG00000101367.8 MAPRE1 chr20 32819893 32850405 + protein_coding KNOWN OTTHUMG00000032228.2 30513 2623 7 ENSG00000260536.1 RP5-1085F17.4 chr20 32843128 32854257 - antisense NOVEL OTTHUMG00000177125.1 11130 459 2 ENSG00000260257.2 RP5-1085F17.3 chr20 32856621 32858751 + lincRNA NOVEL OTTHUMG00000177126.2 2131 2131 1 ENSG00000215529.11 EFCAB8 chr20 32858923 32961609 + protein_coding KNOWN OTTHUMG00000153693.5 102687 4536 36 ENSG00000167098.10 SUN5 chr20 32983773 33004433 - protein_coding KNOWN OTTHUMG00000032239.2 20661 1475 34 ENSG00000078898.6 BPIFB2 chr20 33007600 33023709 + protein_coding KNOWN OTTHUMG00000032232.2 16110 1898 16 ENSG00000167104.10 BPIFB6 chr20 33031648 33044047 + protein_coding KNOWN OTTHUMG00000032238.2 12400 1676 31 ENSG00000237276.7 ANO7P1 chr1 16215909 16228027 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000002221.3 12119 1990 22 ENSG00000231482.2 AC141930.2 chr2 1572554 1580311 - lincRNA NOVEL OTTHUMG00000151384.2 7758 555 2 ENSG00000214245.3 HDHD1P3 chr20 33047517 33048152 - processed_pseudogene KNOWN OTTHUMG00000032236.1 636 636 1 ENSG00000186190.7 BPIFB3 chr20 33055424 33073628 + protein_coding KNOWN OTTHUMG00000032234.2 18205 1454 15 ENSG00000263856.1 AL121756.1 chr20 33057588 33057670 - miRNA NOVEL NA 83 83 1 ENSG00000186191.7 BPIFB4 chr20 33079644 33111751 + protein_coding KNOWN OTTHUMG00000032235.5 32108 2448 26 ENSG00000131050.9 BPIFA2 chr20 33161768 33181412 + protein_coding KNOWN OTTHUMG00000032244.2 19645 1178 18 ENSG00000237662.1 SOCS2P1 chr20 33187391 33188292 + processed_pseudogene KNOWN OTTHUMG00000032246.1 902 557 2 ENSG00000183566.9 BPIFA4P chr20 33193585 33210462 + unitary_pseudogene KNOWN OTTHUMG00000032251.6 16878 1725 23 ENSG00000224876.1 RP11-49G10.3 chr20 33214920 33217067 - antisense NOVEL OTTHUMG00000032248.1 2148 366 2 ENSG00000131059.10 BPIFA3 chr20 33217310 33227758 + protein_coding KNOWN OTTHUMG00000032245.2 10449 2481 27 ENSG00000198183.10 BPIFA1 chr20 33235995 33243311 + protein_coding KNOWN OTTHUMG00000032243.3 7317 1081 36 ENSG00000203635.2 AC144450.2 chr2 1620510 1625419 - lincRNA NOVEL OTTHUMG00000151382.1 4910 1641 2 ENSG00000233106.1 RPL12P3 chr20 33272262 33272657 - processed_pseudogene KNOWN OTTHUMG00000032250.2 396 396 1 ENSG00000125999.9 BPIFB1 chr20 33273480 33309878 + protein_coding KNOWN OTTHUMG00000032252.3 36399 3101 34 ENSG00000233146.1 BPIFB5P chr20 33316869 33329969 + unitary_pseudogene KNOWN OTTHUMG00000032258.1 13101 1099 10 ENSG00000125997.5 BPIFB9P chr20 33347720 33354444 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000032253.4 6725 1611 8 ENSG00000101391.19 CDK5RAP1 chr20 33358839 33401561 - protein_coding KNOWN OTTHUMG00000032256.5 42723 4567 124 ENSG00000101400.5 SNTA1 chr20 33407955 33443892 - protein_coding KNOWN OTTHUMG00000032259.2 35938 2342 8 ENSG00000078699.20 CBFA2T2 chr20 33490075 33650036 + protein_coding KNOWN OTTHUMG00000032261.6 159962 9457 90 ENSG00000275223.1 RP1-63M2.7 chr20 33655701 33656423 - lincRNA NOVEL OTTHUMG00000186771.1 723 723 1 ENSG00000125967.15 NECAB3 chr20 33657087 33674463 - protein_coding KNOWN OTTHUMG00000032264.6 17377 4342 174 ENSG00000149609.5 C20orf144 chr20 33662284 33665619 + protein_coding KNOWN OTTHUMG00000032263.3 3336 2442 3 ENSG00000130508.9 PXDN chr2 1631887 1744852 - protein_coding KNOWN OTTHUMG00000059697.3 112966 11257 100 ENSG00000182584.4 ACTL10 chr20 33666498 33668525 + protein_coding KNOWN OTTHUMG00000032262.1 2028 2028 1 ENSG00000271803.1 RP1-63M2.5 chr20 33674517 33675380 + antisense NOVEL OTTHUMG00000185827.1 864 440 2 ENSG00000101412.12 E2F1 chr20 33675683 33686404 - protein_coding KNOWN OTTHUMG00000032265.2 10722 2503 7 ENSG00000101417.10 PXMP4 chr20 33702754 33720319 - protein_coding KNOWN OTTHUMG00000032273.4 17566 5723 11 ENSG00000229188.2 RP4-553F4.2 chr20 33728931 33731828 - antisense NOVEL OTTHUMG00000032274.2 2898 401 2 ENSG00000131061.12 ZNF341 chr20 33731657 33792269 + protein_coding KNOWN OTTHUMG00000032275.3 60613 5457 61 ENSG00000230837.1 RPL31P2 chr20 33752167 33752543 - processed_pseudogene KNOWN OTTHUMG00000032276.1 377 377 1 ENSG00000230753.4 ZNF341-AS1 chr20 33787373 33811097 - antisense NOVEL OTTHUMG00000032278.2 23725 703 10 ENSG00000101421.3 CHMP4B chr20 33811304 33854366 + protein_coding KNOWN OTTHUMG00000032272.2 43063 1646 5 ENSG00000214200.2 TPM3P2 chr20 33912323 33913336 - processed_pseudogene KNOWN OTTHUMG00000032281.1 1014 723 2 ENSG00000186487.16 MYT1L chr2 1789113 2331260 - protein_coding KNOWN OTTHUMG00000151407.4 542148 13081 100 ENSG00000228958.1 PIGPP3 chr20 33965162 33965576 + processed_pseudogene KNOWN OTTHUMG00000032280.1 415 415 1 ENSG00000228265.4 RALY-AS1 chr20 33983052 33994357 - lincRNA NOVEL OTTHUMG00000032279.1 11306 1207 7 ENSG00000276073.1 RP5-1125A11.7 chr20 33985617 33988989 - lincRNA NOVEL OTTHUMG00000186773.1 3373 3373 1 ENSG00000275784.1 RP5-1125A11.6 chr20 33989480 33991818 - lincRNA NOVEL OTTHUMG00000186772.1 2339 578 2 ENSG00000125970.10 RALY chr20 33993646 34108308 + protein_coding KNOWN OTTHUMG00000032283.2 114663 7513 58 ENSG00000228386.2 RP5-1125A11.4 chr20 34014969 34017749 - lincRNA NOVEL OTTHUMG00000032284.2 2781 603 3 ENSG00000264616.1 MIR4755 chr20 34049119 34049190 + miRNA KNOWN NA 72 72 1 ENSG00000125977.6 EIF2S2 chr20 34088298 34112332 - protein_coding KNOWN OTTHUMG00000032287.2 24035 2656 9 ENSG00000225246.1 RPS2P1 chr20 34122470 34123290 + processed_pseudogene KNOWN OTTHUMG00000032286.1 821 821 1 ENSG00000101440.8 ASIP chr20 34194569 34269344 + protein_coding KNOWN OTTHUMG00000032289.2 74776 778 7 ENSG00000232057.1 AC093390.1 chr2 1824412 1828667 + antisense NOVEL OTTHUMG00000151406.1 4256 3403 2 ENSG00000214185.3 XPOTP1 chr20 34213495 34215892 - processed_pseudogene KNOWN OTTHUMG00000032292.1 2398 2398 1 ENSG00000250917.1 RP4-785G19.5 chr20 34234840 34281173 - sense_overlapping NOVEL OTTHUMG00000185883.1 46334 478 3 ENSG00000236456.1 RP4-785G19.2 chr20 34245953 34246537 - processed_pseudogene KNOWN OTTHUMG00000032291.1 585 585 1 ENSG00000101444.11 AHCY chr20 34280268 34311802 - protein_coding KNOWN OTTHUMG00000140098.3 31535 3894 39 ENSG00000272945.1 CTD-3216D2.5 chr20 34281632 34286466 - sense_intronic NOVEL OTTHUMG00000185848.1 4835 586 2 ENSG00000234087.1 CTD-3216D2.4 chr20 34347671 34347785 - processed_pseudogene KNOWN OTTHUMG00000032295.1 115 115 1 ENSG00000078747.11 ITCH chr20 34363235 34511393 + protein_coding KNOWN OTTHUMG00000032300.2 148159 6666 143 ENSG00000201498.1 Y_RNA chr20 34384165 34384265 - misc_RNA NOVEL NA 101 101 1 ENSG00000234933.1 CDC42P1 chr20 34402149 34402696 - processed_pseudogene KNOWN OTTHUMG00000032293.1 548 548 1 ENSG00000236388.1 ITCH-AS1 chr20 34441592 34442025 - antisense NOVEL OTTHUMG00000032298.1 434 299 2 ENSG00000225619.1 MYT1L-AS1 chr2 2319232 2327110 + antisense NOVEL OTTHUMG00000151409.3 7879 3244 4 ENSG00000231795.1 ITCH-IT1 chr20 34450930 34454552 + sense_intronic NOVEL OTTHUMG00000046196.1 3623 208 2 ENSG00000207997.1 MIR644A chr20 34466325 34466418 + miRNA KNOWN NA 94 94 1 ENSG00000181741.7 FDX1P1 chr20 34475924 34476474 - processed_pseudogene KNOWN OTTHUMG00000032297.1 551 551 1 ENSG00000277558.1 RP3-468O1.6 chr20 34476205 34476787 + sense_intronic NOVEL OTTHUMG00000186779.1 583 583 1 ENSG00000125971.15 DYNLRB1 chr20 34516409 34540958 + protein_coding KNOWN OTTHUMG00000032302.2 24550 2460 16 ENSG00000206582.1 Y_RNA chr20 34526510 34526606 - misc_RNA NOVEL NA 97 97 1 ENSG00000101460.11 MAP1LC3A chr20 34546854 34560345 + protein_coding KNOWN OTTHUMG00000032306.3 13492 1762 17 ENSG00000101464.9 PIGU chr20 34560542 34698790 - protein_coding KNOWN OTTHUMG00000032304.5 138249 2705 44 ENSG00000273561.1 AL118520.1 chr20 34654122 34654214 - miRNA NOVEL NA 93 93 1 ENSG00000231034.1 RP11-346K17.3 chr20 34688688 34688978 + processed_pseudogene KNOWN OTTHUMG00000032303.1 291 291 1 ENSG00000234929.1 AC018685.1 chr2 2641989 2656630 - lincRNA NOVEL OTTHUMG00000151395.1 14642 547 2 ENSG00000198646.12 NCOA6 chr20 34689097 34825649 - protein_coding KNOWN OTTHUMG00000032311.7 136553 11131 74 ENSG00000078804.11 TP53INP2 chr20 34704290 34713439 + protein_coding KNOWN OTTHUMG00000032310.2 9150 4228 16 ENSG00000225336.2 HMGB3P1 chr20 34833575 34834462 - processed_pseudogene KNOWN OTTHUMG00000032313.1 888 573 2 ENSG00000131067.15 GGT7 chr20 34844720 34872860 - protein_coding KNOWN OTTHUMG00000032314.7 28141 2966 28 ENSG00000131069.18 ACSS2 chr20 34872146 34927962 + protein_coding KNOWN OTTHUMG00000032317.7 55817 5385 153 ENSG00000100983.8 GSS chr20 34928430 34955817 - protein_coding KNOWN OTTHUMG00000032315.3 27388 1922 22 ENSG00000078814.14 MYH7B chr20 34975403 35002437 + protein_coding KNOWN OTTHUMG00000032320.3 27035 7931 111 ENSG00000207635.1 MIR499A chr20 34990376 34990497 + miRNA KNOWN NA 122 122 1 ENSG00000100991.10 TRPC4AP chr20 35002404 35092871 - protein_coding KNOWN OTTHUMG00000032319.3 90468 3226 38 ENSG00000202150.1 RNU6-407P chr20 35030317 35030420 - snRNA KNOWN NA 104 104 1 ENSG00000227364.1 AC018685.2 chr2 2729908 2730957 - lincRNA NOVEL OTTHUMG00000151394.1 1050 368 2 ENSG00000088298.11 EDEM2 chr20 35115357 35147364 - protein_coding KNOWN OTTHUMG00000032322.4 32008 1919 21 ENSG00000201151.1 SNORD56 chr20 35117136 35117207 - snoRNA NOVEL NA 72 72 1 ENSG00000101000.4 PROCR chr20 35172073 35177362 + protein_coding KNOWN OTTHUMG00000032323.3 5290 1348 4 ENSG00000278367.1 RP11-42O4.2 chr20 35174355 35174919 - antisense NOVEL OTTHUMG00000186781.1 565 565 1 ENSG00000200301.1 RNA5SP483 chr20 35195306 35195423 + rRNA KNOWN NA 118 118 1 ENSG00000269202.1 RP4-614O4.12 chr20 35201747 35203288 - lincRNA NOVEL OTTHUMG00000183013.1 1542 1542 1 ENSG00000264888.1 AL121753.1 chr20 35214589 35214689 + miRNA NOVEL NA 101 101 1 ENSG00000126005.14 MMP24-AS1 chr20 35216462 35278131 - antisense NOVEL OTTHUMG00000032333.7 61670 3967 30 ENSG00000229230.3 MT1P3 chr20 35218009 35218185 + processed_pseudogene KNOWN OTTHUMG00000032331.2 177 177 1 ENSG00000125966.9 MMP24 chr20 35226654 35277000 + protein_coding KNOWN OTTHUMG00000032330.5 50347 4414 9 ENSG00000237720.1 AC011995.1 chr2 2834264 2838391 - lincRNA NOVEL OTTHUMG00000151393.1 4128 574 3 ENSG00000279253.1 RP4-614O4.13 chr20 35262727 35264187 - TEC KNOWN OTTHUMG00000183014.1 1461 1461 1 ENSG00000261582.1 RP4-614O4.11 chr20 35267885 35280043 - antisense NOVEL OTTHUMG00000176080.1 12159 529 4 ENSG00000242372.5 EIF6 chr20 35278907 35284985 - protein_coding KNOWN OTTHUMG00000032328.5 6079 1637 47 ENSG00000235214.1 FAM83C-AS1 chr20 35285251 35285756 + antisense NOVEL OTTHUMG00000032327.2 506 352 2 ENSG00000125998.7 FAM83C chr20 35285731 35292401 - protein_coding KNOWN OTTHUMG00000032332.3 6671 3145 4 ENSG00000101019.20 UQCC1 chr20 35302566 35412141 - protein_coding KNOWN OTTHUMG00000032335.11 109576 6782 153 ENSG00000204183.1 GDF5OS chr20 35433029 35435450 + protein_coding KNOWN OTTHUMG00000055985.4 2422 1734 2 ENSG00000125965.7 GDF5 chr20 35433347 35454746 - protein_coding KNOWN OTTHUMG00000032341.3 21400 2646 6 ENSG00000221763.1 MIR1289-1 chr20 35453954 35454097 - miRNA KNOWN NA 144 144 1 ENSG00000126001.14 CEP250 chr20 35455164 35519280 + protein_coding KNOWN OTTHUMG00000032343.38 64117 16295 116 ENSG00000228391.1 AC011995.3 chr2 2870558 2871231 - lincRNA NOVEL OTTHUMG00000151428.1 674 578 2 ENSG00000230155.5 RP3-477O4.14 chr20 35476203 35490982 - antisense NOVEL OTTHUMG00000055986.3 14780 839 8 ENSG00000242507.5 RP3-477O4.5 chr20 35520852 35528255 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000032344.4 7404 1327 17 ENSG00000125975.12 C20orf173 chr20 35523186 35529652 - protein_coding KNOWN OTTHUMG00000032340.8 6467 1450 20 ENSG00000125991.17 ERGIC3 chr20 35542021 35557634 + protein_coding KNOWN OTTHUMG00000032346.9 15614 6012 124 ENSG00000224497.1 RPL36P4 chr20 35544430 35544747 - processed_pseudogene KNOWN OTTHUMG00000032338.1 318 318 1 ENSG00000088340.14 FER1L4 chr20 35558737 35607562 - unitary_pseudogene KNOWN OTTHUMG00000032354.11 48826 9067 177 ENSG00000227401.1 RPL37P1 chr20 35588324 35588607 + processed_pseudogene KNOWN OTTHUMG00000032347.2 284 284 1 ENSG00000061656.8 SPAG4 chr20 35615892 35621049 + protein_coding KNOWN OTTHUMG00000032352.4 5158 2240 46 ENSG00000214078.10 CPNE1 chr20 35626031 35664956 - protein_coding KNOWN OTTHUMG00000032356.31 38926 3608 266 ENSG00000272897.4 RP1-309K20.6 chr20 35632340 35674544 - protein_coding NOVEL OTTHUMG00000186060.1 42205 872 23 ENSG00000132881.10 RSG1 chr1 16231700 16237162 - protein_coding KNOWN OTTHUMG00000002214.3 5463 1545 9 ENSG00000234423.1 LINC01250 chr2 2895048 3126026 - lincRNA NOVEL OTTHUMG00000151427.1 230979 2344 7 ENSG00000222460.1 RN7SKP271 chr20 35643143 35643462 + misc_RNA KNOWN NA 320 320 1 ENSG00000252549.1 RNU6-759P chr20 35647328 35647430 - snRNA KNOWN NA 103 103 1 ENSG00000244462.6 RBM12 chr20 35648925 35664956 - protein_coding KNOWN OTTHUMG00000032350.3 16032 6702 17 ENSG00000244005.11 NFS1 chr20 35668055 35699359 - protein_coding KNOWN OTTHUMG00000032361.10 31305 6024 108 ENSG00000125995.14 ROMO1 chr20 35699272 35700984 + protein_coding KNOWN OTTHUMG00000032360.4 1713 702 14 ENSG00000131051.19 RBM39 chr20 35703609 35742312 - protein_coding KNOWN OTTHUMG00000032358.17 38704 9307 336 ENSG00000225357.3 RPF2P1 chr20 35752814 35753719 + processed_pseudogene KNOWN OTTHUMG00000032362.4 906 906 1 ENSG00000025293.14 PHF20 chr20 35771974 35950381 + protein_coding KNOWN OTTHUMG00000032367.6 178408 8384 107 ENSG00000234274.1 COX7BP2 chr20 35850674 35850915 - processed_pseudogene KNOWN OTTHUMG00000032365.1 242 242 1 ENSG00000199676.1 Y_RNA chr20 35853252 35853364 - misc_RNA NOVEL NA 113 113 1 ENSG00000263570.1 AC074264.1 chr2 3017219 3017330 - miRNA NOVEL NA 112 112 1 ENSG00000219608.3 HIGD1AP16 chr20 35878476 35878733 + processed_pseudogene KNOWN OTTHUMG00000032366.1 258 258 1 ENSG00000201221.1 RNU4-40P chr20 35887659 35887801 + snRNA KNOWN NA 143 143 1 ENSG00000207053.1 RNU6-937P chr20 35928570 35928675 - snRNA KNOWN NA 106 106 1 ENSG00000171222.9 SCAND1 chr20 35953617 35959472 - protein_coding KNOWN OTTHUMG00000032370.2 5856 1996 8 ENSG00000149646.11 CNBD2 chr20 35954564 36030700 + protein_coding KNOWN OTTHUMG00000032371.5 76137 5005 52 ENSG00000260032.1 LINC00657 chr20 36045622 36050960 - lincRNA NOVEL OTTHUMG00000175580.1 5339 5339 1 ENSG00000277235.1 RP4-550H1.7 chr20 36064243 36064563 - lincRNA NOVEL OTTHUMG00000186786.1 321 321 1 ENSG00000234139.2 RP4-550H1.4 chr20 36072441 36085260 + lincRNA NOVEL OTTHUMG00000032375.2 12820 682 5 ENSG00000231470.1 HMGB3P2 chr20 36076018 36076601 - processed_pseudogene KNOWN OTTHUMG00000032373.1 584 584 1 ENSG00000237063.1 RP4-550H1.5 chr20 36086252 36088192 - lincRNA NOVEL OTTHUMG00000032376.1 1941 616 2 ENSG00000236760.1 AC019118.3 chr2 3131581 3145780 - lincRNA NOVEL OTTHUMG00000151429.1 14200 952 4 ENSG00000088367.19 EPB41L1 chr20 36091504 36232799 + protein_coding KNOWN OTTHUMG00000032378.8 141296 7859 210 ENSG00000232406.5 RP11-234K24.3 chr20 36148726 36155760 - antisense NOVEL OTTHUMG00000032377.2 7035 2849 8 ENSG00000278035.1 RP11-234K24.6 chr20 36233851 36234297 + lincRNA NOVEL OTTHUMG00000186787.1 447 447 1 ENSG00000131043.10 AAR2 chr20 36236459 36270918 + protein_coding KNOWN OTTHUMG00000032380.2 34460 3101 12 ENSG00000281193.1 AL121895.1 chr20 36255716 36255820 + miRNA NOVEL NA 105 105 1 ENSG00000080845.16 DLGAP4 chr20 36306336 36528637 + protein_coding KNOWN OTTHUMG00000032390.5 222302 8789 110 ENSG00000232907.6 DLGAP4-AS1 chr20 36507702 36573391 - antisense NOVEL OTTHUMG00000032391.4 65690 2437 19 ENSG00000101335.8 MYL9 chr20 36541484 36551447 + protein_coding KNOWN OTTHUMG00000032387.3 9964 2821 7 ENSG00000273986.1 Metazoa_SRP chr20 36561237 36561530 - misc_RNA NOVEL NA 294 294 1 ENSG00000118707.8 TGIF2 chr20 36573488 36593950 + protein_coding KNOWN OTTHUMG00000172332.2 20463 3784 22 ENSG00000226649.1 AC019118.4 chr2 3156756 3157797 + lincRNA NOVEL OTTHUMG00000151435.1 1042 435 3 ENSG00000259399.1 TGIF2-C20orf24 chr20 36574553 36612384 + protein_coding KNOWN OTTHUMG00000032382.3 37832 918 5 ENSG00000101084.15 C20orf24 chr20 36605734 36612557 + protein_coding KNOWN OTTHUMG00000032384.3 6824 1517 25 ENSG00000101082.12 SLA2 chr20 36612318 36646216 - protein_coding KNOWN OTTHUMG00000032393.2 33899 2757 16 ENSG00000227688.2 HNRNPA3P2 chr20 36620403 36621423 + unprocessed_pseudogene KNOWN OTTHUMG00000032385.2 1021 662 2 ENSG00000101079.19 NDRG3 chr20 36651766 36746078 - protein_coding KNOWN OTTHUMG00000032398.3 94313 3248 68 ENSG00000202255.1 Y_RNA chr20 36668559 36668670 - misc_RNA NOVEL NA 112 112 1 ENSG00000265441.1 AL132768.1 chr20 36746056 36746130 + miRNA NOVEL NA 75 75 1 ENSG00000149636.14 DSN1 chr20 36751791 36773818 - protein_coding KNOWN OTTHUMG00000032396.5 22028 2739 96 ENSG00000149639.13 SOGA1 chr20 36777442 36863686 - protein_coding KNOWN OTTHUMG00000032395.7 86245 15128 44 ENSG00000242509.3 RN7SL156P chr20 36870099 36870402 + misc_RNA KNOWN NA 304 304 1 ENSG00000032389.11 TSSC1 chr2 3188925 3377882 - protein_coding KNOWN OTTHUMG00000090329.3 188958 5775 83 ENSG00000101342.8 TLDC2 chr20 36876121 36894235 + protein_coding KNOWN OTTHUMG00000032400.3 18115 2553 15 ENSG00000101347.8 SAMHD1 chr20 36890229 36951843 - protein_coding KNOWN OTTHUMG00000032402.2 61615 5038 19 ENSG00000080839.10 RBL1 chr20 36996349 37095995 - protein_coding KNOWN OTTHUMG00000032406.3 99647 5954 54 ENSG00000231241.1 RPS3AP3 chr20 37021743 37021984 - processed_pseudogene KNOWN OTTHUMG00000032403.1 242 242 1 ENSG00000226144.2 RPS27AP3 chr20 37049254 37049707 + processed_pseudogene KNOWN OTTHUMG00000032404.2 454 454 1 ENSG00000269846.1 RP4-621N11.2 chr20 37095785 37097178 + antisense NOVEL OTTHUMG00000187317.1 1394 1394 1 ENSG00000101353.13 MROH8 chr20 37101226 37179588 - protein_coding KNOWN OTTHUMG00000032407.4 78363 3878 105 ENSG00000236159.1 RP3-343K2.4 chr20 37165774 37166312 - processed_pseudogene KNOWN OTTHUMG00000032410.1 539 539 1 ENSG00000118705.15 RPN2 chr20 37178410 37241623 + protein_coding KNOWN OTTHUMG00000032409.4 63214 2819 69 ENSG00000118702.8 GHRH chr20 37251082 37261835 - protein_coding KNOWN OTTHUMG00000032413.3 10754 570 13 ENSG00000224885.1 TSSC1-IT1 chr2 3298341 3301465 - sense_intronic NOVEL OTTHUMG00000151430.1 3125 718 2 ENSG00000101363.11 MANBAL chr20 37289638 37317260 + protein_coding KNOWN OTTHUMG00000032414.2 27623 2045 20 ENSG00000197122.10 SRC chr20 37344685 37406050 + protein_coding KNOWN OTTHUMG00000032417.3 61366 6468 74 ENSG00000213979.3 RPL7AP14 chr20 37444733 37445534 - processed_pseudogene KNOWN OTTHUMG00000032418.1 802 802 1 ENSG00000166619.11 BLCAP chr20 37492472 37527931 - protein_coding KNOWN OTTHUMG00000032419.4 35460 7869 33 ENSG00000053438.8 NNAT chr20 37521215 37523693 + protein_coding KNOWN OTTHUMG00000032420.3 2479 1297 5 ENSG00000276603.1 RP11-425M5.7 chr20 37526642 37527060 - sense_intronic NOVEL OTTHUMG00000186254.2 419 419 1 ENSG00000235044.1 PPIAP3 chr20 37530039 37530543 + processed_pseudogene KNOWN OTTHUMG00000032425.1 505 505 1 ENSG00000274469.1 RP11-425M5.8 chr20 37571103 37583935 + lincRNA NOVEL OTTHUMG00000185859.2 12833 449 4 ENSG00000228234.1 GLRXP chr20 37602852 37603185 - processed_pseudogene KNOWN OTTHUMG00000032423.1 334 334 1 ENSG00000225759.1 LINC00489 chr20 37619298 37623119 - lincRNA KNOWN OTTHUMG00000046198.4 3822 543 3 ENSG00000171853.14 TRAPPC12 chr2 3379675 3485094 + protein_coding KNOWN OTTHUMG00000090328.3 105420 9193 122 ENSG00000204117.1 RP4-640H8.2 chr20 37676910 37683234 + lincRNA NOVEL OTTHUMG00000140219.1 6325 2112 4 ENSG00000132792.17 CTNNBL1 chr20 37693955 37872129 + protein_coding KNOWN OTTHUMG00000032428.4 178175 4148 120 ENSG00000132821.10 VSTM2L chr20 37903104 37945350 + protein_coding KNOWN OTTHUMG00000032430.2 42247 1959 9 ENSG00000199683.1 RN7SKP185 chr20 37975156 37975481 - misc_RNA KNOWN NA 326 326 1 ENSG00000101407.11 TTI1 chr20 37983007 38033468 - protein_coding KNOWN OTTHUMG00000032433.4 50462 4479 32 ENSG00000101413.10 RPRD1B chr20 38033546 38127780 + protein_coding KNOWN OTTHUMG00000032434.5 94235 5511 33 ENSG00000264767.2 RN7SL237P chr20 38098414 38098700 - misc_RNA KNOWN NA 287 287 1 ENSG00000277550.1 RP5-1057B20.3 chr20 38103524 38104961 - lincRNA NOVEL OTTHUMG00000186833.1 1438 1438 1 ENSG00000198959.10 TGM2 chr20 38127387 38166578 - protein_coding KNOWN OTTHUMG00000032437.3 39192 8036 44 ENSG00000149633.10 KIAA1755 chr20 38210488 38260772 - protein_coding KNOWN OTTHUMG00000032436.7 50285 8083 40 ENSG00000225234.1 TRAPPC12-AS1 chr2 3481242 3482409 - antisense NOVEL OTTHUMG00000151434.1 1168 908 2 ENSG00000277829.1 RP5-1054A22.4 chr20 38233251 38233799 - sense_intronic NOVEL OTTHUMG00000186837.1 549 549 1 ENSG00000101425.11 BPI chr20 38260149 38337505 + protein_coding KNOWN OTTHUMG00000032441.4 77357 5626 49 ENSG00000206249.3 CTD-2308N23.2 chr20 38288331 38326536 - antisense NOVEL OTTHUMG00000032439.1 38206 806 3 ENSG00000281466.1 AL391095.1 chr20 38339655 38339728 - miRNA NOVEL NA 74 74 1 ENSG00000129988.5 LBP chr20 38346356 38377023 + protein_coding KNOWN OTTHUMG00000032447.3 30668 1961 15 ENSG00000275285.1 RP4-564F22.6 chr20 38378825 38383179 + lincRNA NOVEL OTTHUMG00000186840.1 4355 378 2 ENSG00000224635.1 RP4-564F22.5 chr20 38406011 38416797 - lincRNA NOVEL OTTHUMG00000032445.2 10787 2004 2 ENSG00000275401.1 RP4-564F22.7 chr20 38418483 38419202 - lincRNA NOVEL OTTHUMG00000186875.1 720 720 1 ENSG00000196756.10 SNHG17 chr20 38420588 38435353 - processed_transcript NOVEL OTTHUMG00000032442.3 14766 4186 42 ENSG00000277034.1 SNORA71 chr20 38421647 38421774 - snoRNA NOVEL NA 128 128 1 ENSG00000271868.1 RP11-1293J14.1 chr2 3496956 3497428 + lincRNA NOVEL OTTHUMG00000185500.1 473 473 1 ENSG00000235408.4 SNORA71B chr20 38425083 38425354 - snoRNA KNOWN OTTHUMG00000032446.2 272 272 1 ENSG00000273718.1 SNORA71 chr20 38425198 38425331 - snoRNA KNOWN NA 134 134 1 ENSG00000225091.3 SNORA71A chr20 38427309 38427442 - snoRNA KNOWN NA 134 134 1 ENSG00000201512.1 SNORA71C chr20 38429670 38429803 - snoRNA KNOWN NA 134 134 1 ENSG00000200354.1 SNORA71D chr20 38433865 38433998 - snoRNA KNOWN NA 134 134 1 ENSG00000201811.1 SNORA71 chr20 38442036 38442169 + snoRNA NOVEL NA 134 134 1 ENSG00000174365.18 SNHG11 chr20 38446578 38450921 + processed_transcript KNOWN OTTHUMG00000032449.1 4344 2813 63 ENSG00000274309.1 SNORA71E chr20 38448084 38448215 + snoRNA KNOWN NA 132 132 1 ENSG00000199266.1 SNORA60 chr20 38449370 38449503 + snoRNA KNOWN NA 134 134 1 ENSG00000170471.13 RALGAPB chr20 38472816 38578861 + protein_coding KNOWN OTTHUMG00000140270.3 106046 12624 140 ENSG00000182551.12 ADI1 chr2 3497361 3519736 - protein_coding KNOWN OTTHUMG00000112441.6 22376 5560 10 ENSG00000275453.1 AL049868.1 chr20 38516537 38516647 + miRNA NOVEL NA 111 111 1 ENSG00000231307.1 RPS3P2 chr20 38537758 38538458 + processed_pseudogene KNOWN OTTHUMG00000032448.1 701 701 1 ENSG00000182035.10 ADIG chr20 38581195 38588463 + protein_coding KNOWN OTTHUMG00000032451.6 7269 1033 11 ENSG00000281747.1 AL035419.1 chr20 38598316 38598383 + miRNA NOVEL NA 68 68 1 ENSG00000124143.9 ARHGAP40 chr20 38601934 38651035 + protein_coding KNOWN OTTHUMG00000032453.3 49102 3195 38 ENSG00000213959.2 RP5-1100H13.3 chr20 38614913 38615476 - processed_pseudogene KNOWN OTTHUMG00000032452.1 564 564 1 ENSG00000277965.1 Metazoa_SRP chr20 38711821 38712103 - misc_RNA NOVEL NA 283 283 1 ENSG00000101438.3 SLC32A1 chr20 38724462 38729372 + protein_coding KNOWN OTTHUMG00000032457.1 4911 2574 2 ENSG00000101442.9 ACTR5 chr20 38748442 38772520 + protein_coding KNOWN OTTHUMG00000032456.3 24079 2565 9 ENSG00000199691.1 RN7SKP173 chr20 38761528 38761842 + misc_RNA KNOWN NA 315 315 1 ENSG00000233929.1 MT1XP1 chr1 16241213 16241398 - processed_pseudogene KNOWN OTTHUMG00000037883.1 186 186 1 ENSG00000235078.1 AC142528.1 chr2 3519275 3523197 + antisense NOVEL OTTHUMG00000151471.2 3923 974 2 ENSG00000101445.8 PPP1R16B chr20 38805705 38923024 + protein_coding KNOWN OTTHUMG00000032465.3 117320 6400 28 ENSG00000240474.3 RN7SL116P chr20 38872770 38873074 + misc_RNA KNOWN NA 305 305 1 ENSG00000101447.12 FAM83D chr20 38926312 38953106 + protein_coding KNOWN OTTHUMG00000032462.3 26795 2475 12 ENSG00000274825.1 RP4-616B8.5 chr20 38955910 38956547 + lincRNA NOVEL OTTHUMG00000186878.1 638 638 1 ENSG00000261431.1 RP4-616B8.4 chr20 38961925 38962111 - antisense NOVEL OTTHUMG00000175581.1 187 187 1 ENSG00000101452.13 DHX35 chr20 38962299 39039723 + protein_coding KNOWN OTTHUMG00000032463.6 77425 4930 98 ENSG00000277581.1 RP4-616B8.6 chr20 38962472 38962993 + sense_intronic NOVEL OTTHUMG00000186879.1 522 522 1 ENSG00000223864.1 NPM1P19 chr20 38977711 38978422 - processed_pseudogene KNOWN OTTHUMG00000032459.1 712 712 1 ENSG00000230324.1 RP4-705O1.1 chr20 39213777 39224748 - lincRNA NOVEL OTTHUMG00000032466.2 10972 1518 4 ENSG00000211534.2 AL121588.1 chr20 39271540 39271615 + miRNA NOVEL NA 76 76 1 ENSG00000242282.5 AC108488.4 chr2 3531813 3536873 - lincRNA NOVEL OTTHUMG00000151418.2 5061 1532 14 ENSG00000224357.1 ATG3P1 chr20 39329014 39329924 - processed_pseudogene KNOWN OTTHUMG00000032467.1 911 911 1 ENSG00000275337.1 Metazoa_SRP chr20 39349094 39349392 - misc_RNA NOVEL NA 299 299 1 ENSG00000281574.1 Metazoa_SRP chr20 39352778 39353023 + misc_RNA NOVEL NA 246 246 1 ENSG00000229976.1 RP5-1031J8.1 chr20 39785721 39813229 + lincRNA NOVEL OTTHUMG00000032468.1 27509 480 2 ENSG00000234878.1 HSPE1P1 chr20 39932922 39933239 - processed_pseudogene KNOWN OTTHUMG00000032471.1 318 318 1 ENSG00000237767.1 LINC01370 chr20 40004477 40008529 + lincRNA NOVEL OTTHUMG00000032469.1 4053 822 6 ENSG00000233415.1 RP11-101E14.3 chr20 40031585 40043889 + lincRNA NOVEL OTTHUMG00000032470.1 12305 640 3 ENSG00000281064.1 AL009050.1 chr20 40103219 40103357 - miRNA NOVEL NA 139 139 1 ENSG00000223410.1 RP1-191L6.2 chr20 40121041 40126357 + lincRNA NOVEL OTTHUMG00000032472.1 5317 426 3 ENSG00000221201.2 AL049691.1 chr20 40372814 40372901 - miRNA NOVEL NA 88 88 1 ENSG00000255767.1 RP13-512J5.1 chr2 3531984 3547957 - protein_coding PUTATIVE OTTHUMG00000167878.1 15974 421 3 ENSG00000204103.3 MAFB chr20 40685848 40689240 - protein_coding KNOWN OTTHUMG00000033052.2 3393 3393 1 ENSG00000229771.2 RP4-644L1.2 chr20 40696499 40698616 - lincRNA NOVEL OTTHUMG00000032473.2 2118 1669 2 ENSG00000238908.1 RNA5SP484 chr20 40854119 40854229 - rRNA KNOWN NA 111 111 1 ENSG00000222612.1 RNU2-52P chr20 41024205 41024394 + snRNA KNOWN NA 190 190 1 ENSG00000198900.5 TOP1 chr20 41028818 41124487 + protein_coding KNOWN OTTHUMG00000033057.2 95670 3738 21 ENSG00000226648.1 PLCG1-AS1 chr20 41098329 41138003 - antisense NOVEL OTTHUMG00000032476.1 39675 1462 7 ENSG00000124181.13 PLCG1 chr20 41136960 41196801 + protein_coding KNOWN OTTHUMG00000033082.8 59842 9648 165 ENSG00000276169.1 MIR6871 chr20 41169023 41169078 + miRNA KNOWN NA 56 56 1 ENSG00000174306.20 ZHX3 chr20 41178448 41317672 - protein_coding KNOWN OTTHUMG00000032481.5 139225 11621 79 ENSG00000272407.1 RP3-511B24.5 chr20 41196647 41196938 - transcribed_processed_pseudogene KNOWN OTTHUMG00000185618.1 292 292 1 ENSG00000171865.8 RNASEH1 chr2 3544793 3558616 - protein_coding KNOWN OTTHUMG00000090279.2 13824 2865 23 ENSG00000242748.1 RPL23AP81 chr20 41196691 41197157 + transcribed_processed_pseudogene KNOWN OTTHUMG00000032477.2 467 467 1 ENSG00000263989.2 RN7SL615P chr20 41290280 41290577 - misc_RNA KNOWN NA 298 298 1 ENSG00000235102.1 RP3-450M14.1 chr20 41331123 41331660 + processed_pseudogene KNOWN OTTHUMG00000032482.1 538 538 1 ENSG00000132793.10 LPIN3 chr20 41340920 41360582 + protein_coding KNOWN OTTHUMG00000033056.1 19663 4565 38 ENSG00000183798.4 EMILIN3 chr20 41359966 41366827 - protein_coding KNOWN OTTHUMG00000046304.2 6862 3796 4 ENSG00000229398.1 RP4-620E11.5 chr20 41382383 41383107 + processed_pseudogene KNOWN OTTHUMG00000032484.1 725 725 1 ENSG00000124177.13 CHD6 chr20 41402101 41618494 - protein_coding KNOWN OTTHUMG00000032487.2 216394 14126 91 ENSG00000235088.1 RP4-620E11.4 chr20 41459354 41461944 - processed_pseudogene KNOWN OTTHUMG00000032483.1 2591 323 2 ENSG00000273951.1 RP4-620E11.8 chr20 41485571 41486225 - sense_intronic NOVEL OTTHUMG00000186892.1 655 655 1 ENSG00000232493.2 RPL12P11 chr20 41547422 41547922 + processed_pseudogene KNOWN OTTHUMG00000032488.1 501 501 1 ENSG00000234171.2 RNASEH1-AS1 chr2 3558492 3561745 + antisense NOVEL OTTHUMG00000151419.2 3254 1218 5 ENSG00000252386.1 RNU6-1018P chr20 41684986 41685091 - snRNA KNOWN NA 106 106 1 ENSG00000212224.1 SNORA26 chr20 41712479 41712600 - snoRNA NOVEL NA 122 122 1 ENSG00000225458.1 RP5-1121H13.4 chr20 41991140 42063969 + antisense NOVEL OTTHUMG00000032492.1 72830 594 2 ENSG00000223651.1 RP5-1121H13.1 chr20 41997131 41999397 - processed_pseudogene KNOWN OTTHUMG00000032490.1 2267 2267 1 ENSG00000228959.1 RP5-1121H13.3 chr20 42014034 42015478 - lincRNA NOVEL OTTHUMG00000032491.1 1445 417 3 ENSG00000196090.11 PTPRT chr20 42072752 43189970 - protein_coding KNOWN OTTHUMG00000033040.5 1117219 12943 305 ENSG00000229892.1 RP4-730D4.1 chr20 42606694 42607559 + processed_pseudogene KNOWN OTTHUMG00000032493.1 866 348 2 ENSG00000229042.2 RP1-232N11.2 chr20 42685404 42688562 + antisense NOVEL OTTHUMG00000032494.2 3159 2133 7 ENSG00000227599.1 RP4-753D4.2 chr20 42968743 42971492 + antisense NOVEL OTTHUMG00000032495.1 2750 1586 2 ENSG00000223190.1 RN7SKP100 chr20 43063326 43063609 + misc_RNA KNOWN NA 284 284 1 ENSG00000171863.11 RPS7 chr2 3575205 3580919 + protein_coding KNOWN OTTHUMG00000090305.2 5715 5583 45 ENSG00000266136.2 AL117374.1 chr20 43073549 43073661 + miRNA NOVEL NA 113 113 1 ENSG00000233508.2 RP1-269M15.3 chr20 43190101 43202599 + lincRNA NOVEL OTTHUMG00000032498.2 12499 2232 5 ENSG00000240639.3 RN7SL666P chr20 43222206 43222509 + misc_RNA KNOWN NA 304 304 1 ENSG00000226038.5 PPIAP21 chr20 43230760 43231260 + processed_pseudogene KNOWN OTTHUMG00000032496.1 501 501 1 ENSG00000252193.1 SCARNA15 chr20 43304555 43304679 + scaRNA NOVEL NA 125 125 1 ENSG00000281368.1 AL021395.1 chr20 43304608 43304680 + miRNA NOVEL NA 73 73 1 ENSG00000237555.1 RP5-862K6.4 chr20 43388642 43389041 - processed_pseudogene KNOWN OTTHUMG00000032499.1 400 400 1 ENSG00000281663.1 AL031681.1 chr20 43400365 43400502 - miRNA NOVEL NA 138 138 1 ENSG00000201021.1 RNU6-743P chr20 43405473 43405578 + snRNA KNOWN NA 106 106 1 ENSG00000233711.1 EIF4EBP2P1 chr20 43423196 43423538 - processed_pseudogene KNOWN OTTHUMG00000032500.1 343 343 1 ENSG00000118004.16 COLEC11 chr2 3594832 3644644 + protein_coding KNOWN OTTHUMG00000090304.8 49813 2778 77 ENSG00000206998.1 Y_RNA chr20 43451159 43451260 - misc_RNA NOVEL NA 102 102 1 ENSG00000124193.13 SRSF6 chr20 43457928 43464247 + protein_coding KNOWN OTTHUMG00000032502.5 6320 4593 13 ENSG00000201372.1 RNU6-1251P chr20 43473013 43473119 + snRNA KNOWN NA 107 107 1 ENSG00000185513.13 L3MBTL1 chr20 43507680 43550950 + protein_coding KNOWN OTTHUMG00000032503.4 43271 10674 158 ENSG00000234271.1 RP1-138B7.4 chr20 43523261 43523572 - processed_pseudogene KNOWN OTTHUMG00000032504.1 312 312 1 ENSG00000277611.1 RP1-138B7.6 chr20 43540171 43569498 + protein_coding NOVEL OTTHUMG00000187507.1 29328 566 7 ENSG00000226143.1 RP1-138B7.5 chr20 43549389 43550949 - antisense NOVEL OTTHUMG00000032505.1 1561 518 2 ENSG00000101049.13 SGK2 chr20 43558968 43588237 + protein_coding KNOWN OTTHUMG00000033054.5 29270 4374 112 ENSG00000101052.11 IFT52 chr20 43590931 43647296 + protein_coding KNOWN OTTHUMG00000032513.1 56366 2542 52 ENSG00000215467.2 RPL27AP chr20 43652523 43653291 + processed_pseudogene KNOWN OTTHUMG00000032508.1 769 435 2 ENSG00000237370.1 AC010907.2 chr2 3603397 3604242 - antisense NOVEL OTTHUMG00000151467.1 846 693 2 ENSG00000101057.14 MYBL2 chr20 43667019 43716496 + protein_coding KNOWN OTTHUMG00000033062.1 49478 2777 27 ENSG00000124196.5 GTSF1L chr20 43726164 43726998 - protein_coding KNOWN OTTHUMG00000032510.1 835 835 3 ENSG00000206801.1 RNU6-639P chr20 43796437 43796543 - snRNA KNOWN NA 107 107 1 ENSG00000233277.1 RP5-1030M6.3 chr20 43894720 43895468 + lincRNA NOVEL OTTHUMG00000032515.1 749 524 2 ENSG00000124191.16 TOX2 chr20 43914864 44069616 + protein_coding KNOWN OTTHUMG00000032517.5 154753 3223 46 ENSG00000241229.3 RN7SL443P chr20 44007248 44007537 + misc_RNA KNOWN NA 290 290 1 ENSG00000149596.6 JPH2 chr20 44111695 44187578 - protein_coding KNOWN OTTHUMG00000033037.1 75884 5943 8 ENSG00000132823.9 OSER1 chr20 44196496 44210791 - protein_coding KNOWN OTTHUMG00000032518.2 14296 1712 10 ENSG00000223891.4 OSER1-AS1 chr20 44210960 44226027 + lincRNA NOVEL OTTHUMG00000032521.4 15068 2186 17 ENSG00000124194.14 GDAP1L1 chr20 44247099 44280917 + protein_coding KNOWN OTTHUMG00000032530.1 33819 3385 51 ENSG00000188765.7 TMSB4XP2 chr2 3617548 3617757 - unprocessed_pseudogene KNOWN OTTHUMG00000151484.1 210 210 1 ENSG00000197296.5 FITM2 chr20 44302838 44311169 - protein_coding KNOWN OTTHUMG00000032522.3 8332 4597 2 ENSG00000101074.3 R3HDML chr20 44336986 44351235 + protein_coding KNOWN OTTHUMG00000032524.1 14250 1377 5 ENSG00000201363.2 Y_RNA chr20 44344839 44344933 + misc_RNA NOVEL NA 95 95 1 ENSG00000226812.2 RP5-881L22.5 chr20 44347552 44355185 - antisense NOVEL OTTHUMG00000032526.2 7634 906 6 ENSG00000101076.15 HNF4A chr20 44355700 44434596 + protein_coding KNOWN OTTHUMG00000032531.5 78897 7311 82 ENSG00000229005.2 HNF4A-AS1 chr20 44372746 44395706 - antisense NOVEL OTTHUMG00000032525.2 22961 912 6 ENSG00000233376.1 RP5-881L22.6 chr20 44389624 44391537 - antisense NOVEL OTTHUMG00000032527.1 1914 403 2 ENSG00000266151.1 MIR3646 chr20 44408120 44408203 + miRNA KNOWN NA 84 84 1 ENSG00000265893.1 AL132772.1 chr20 44425052 44425141 - miRNA NOVEL NA 90 90 1 ENSG00000237907.1 LINC01430 chr20 44448777 44450092 - antisense NOVEL OTTHUMG00000032534.2 1316 411 2 ENSG00000151360.8 ALLC chr2 3658195 3702671 + protein_coding KNOWN OTTHUMG00000151485.1 44477 2542 23 ENSG00000168746.7 C20orf62 chr20 44451984 44465344 - protein_coding KNOWN OTTHUMG00000130221.1 13361 890 7 ENSG00000226243.1 RPL37AP1 chr20 44466564 44466842 - processed_pseudogene KNOWN OTTHUMG00000032532.1 279 279 1 ENSG00000124120.9 TTPAL chr20 44475886 44494603 + protein_coding KNOWN OTTHUMG00000032536.4 18718 7044 21 ENSG00000132824.12 SERINC3 chr20 44496221 44522109 - protein_coding KNOWN OTTHUMG00000033087.3 25889 4683 29 ENSG00000168734.12 PKIG chr20 44531785 44624247 + protein_coding KNOWN OTTHUMG00000033065.2 92463 2496 35 ENSG00000196839.11 ADA chr20 44619522 44652233 - protein_coding KNOWN OTTHUMG00000033081.3 32712 2852 71 ENSG00000132832.8 LINC01260 chr20 44656451 44696096 - antisense NOVEL OTTHUMG00000032542.3 39646 1416 10 ENSG00000244558.4 KCNK15-AS1 chr20 44694892 44746021 - antisense NOVEL OTTHUMG00000032545.1 51130 1226 13 ENSG00000064205.9 WISP2 chr20 44714844 44728509 + protein_coding KNOWN OTTHUMG00000033071.2 13666 4981 19 ENSG00000124249.6 KCNK15 chr20 44745780 44752313 + protein_coding KNOWN OTTHUMG00000032544.3 6534 2599 2 ENSG00000037637.9 FBXO42 chr1 16246839 16352454 - protein_coding KNOWN OTTHUMG00000002218.1 105616 8984 20 ENSG00000232718.1 GAPDHP48 chr2 3688021 3688981 - processed_pseudogene KNOWN OTTHUMG00000151489.1 961 961 1 ENSG00000276223.1 RP4-781B1.5 chr20 44746642 44747201 + sense_intronic NOVEL OTTHUMG00000186895.1 560 560 1 ENSG00000101098.11 RIMS4 chr20 44751808 44810338 - protein_coding KNOWN OTTHUMG00000032546.4 58531 5206 12 ENSG00000277708.1 PGBD4P2 chr20 44841925 44842539 - unprocessed_pseudogene KNOWN OTTHUMG00000187975.1 615 615 1 ENSG00000166913.11 YWHAB chr20 44885676 44908532 + protein_coding KNOWN OTTHUMG00000032549.3 22857 4017 31 ENSG00000101104.11 PABPC1L chr20 44910062 44959035 + protein_coding KNOWN OTTHUMG00000032553.8 48974 4984 120 ENSG00000025772.7 TOMM34 chr20 44942130 44960486 - protein_coding KNOWN OTTHUMG00000032552.3 18357 2062 7 ENSG00000227477.1 STK4-AS1 chr20 44963794 44966402 - lincRNA NOVEL OTTHUMG00000032555.1 2609 2065 6 ENSG00000101109.10 STK4 chr20 44966474 45079959 + protein_coding KNOWN OTTHUMG00000033059.5 113486 9075 49 ENSG00000252021.1 Y_RNA chr20 45004348 45004454 + misc_RNA NOVEL NA 107 107 1 ENSG00000124134.7 KCNS1 chr20 45092310 45101112 - protein_coding KNOWN OTTHUMG00000033079.3 8803 4538 9 ENSG00000224661.1 AC010907.5 chr2 3702585 3704153 - antisense NOVEL OTTHUMG00000151488.1 1569 807 2 ENSG00000175121.10 WFDC5 chr20 45109452 45115172 - protein_coding KNOWN OTTHUMG00000046411.1 5721 1044 8 ENSG00000168703.5 WFDC12 chr20 45123425 45124465 - protein_coding KNOWN OTTHUMG00000046412.1 1041 775 3 ENSG00000124102.4 PI3 chr20 45174876 45176544 + protein_coding KNOWN OTTHUMG00000032567.3 1669 577 3 ENSG00000124233.11 SEMG1 chr20 45206997 45209772 + protein_coding KNOWN OTTHUMG00000032565.3 2776 1662 3 ENSG00000124157.6 SEMG2 chr20 45221300 45224458 + protein_coding KNOWN OTTHUMG00000032566.1 3159 2051 3 ENSG00000233352.1 RP1-300I2.3 chr20 45229817 45230191 + unprocessed_pseudogene KNOWN OTTHUMG00000154638.1 375 222 2 ENSG00000243995.1 RP1-300I2.2 chr20 45230868 45233331 + unitary_pseudogene KNOWN OTTHUMG00000032569.4 2464 556 5 ENSG00000124107.5 SLPI chr20 45252239 45254564 - protein_coding KNOWN OTTHUMG00000033075.3 2326 596 4 ENSG00000124159.14 MATN4 chr20 45293445 45308529 - protein_coding KNOWN OTTHUMG00000033043.2 15085 2467 47 ENSG00000124232.9 RBPJL chr20 45306851 45317824 + protein_coding KNOWN OTTHUMG00000033055.2 10974 2763 44 ENSG00000214866.6 DCDC2C chr2 3703592 3847408 + protein_coding KNOWN OTTHUMG00000151490.2 143817 1780 28 ENSG00000124145.6 SDC4 chr20 45325288 45348424 - protein_coding KNOWN OTTHUMG00000033083.1 23137 2613 5 ENSG00000275894.1 RP3-453C12.14 chr20 45345115 45345823 - sense_intronic NOVEL OTTHUMG00000186913.1 709 709 1 ENSG00000204070.8 SYS1 chr20 45361937 45376798 + protein_coding KNOWN OTTHUMG00000032579.2 14862 6117 30 ENSG00000254806.4 SYS1-DBNDD2 chr20 45363200 45410610 + protein_coding KNOWN OTTHUMG00000166214.1 47411 1402 22 ENSG00000124251.9 TP53TG5 chr20 45372563 45407889 - protein_coding KNOWN OTTHUMG00000032582.3 35327 3040 18 ENSG00000232880.1 RP3-453C12.8 chr20 45388347 45388705 - processed_pseudogene KNOWN OTTHUMG00000032580.1 359 359 1 ENSG00000244274.6 DBNDD2 chr20 45406057 45410610 + protein_coding KNOWN OTTHUMG00000032576.2 4554 2764 34 ENSG00000124155.15 PIGT chr20 45416077 45426244 + protein_coding KNOWN OTTHUMG00000032574.5 10168 2428 62 ENSG00000273555.1 MIR6812 chr20 45425510 45425573 + miRNA KNOWN NA 64 64 1 ENSG00000277022.1 RP3-453C12.15 chr20 45435272 45448325 - lincRNA NOVEL OTTHUMG00000186919.1 13054 1794 2 ENSG00000227363.1 AC019172.2 chr2 3844184 3847411 + lincRNA NOVEL OTTHUMG00000151491.1 3228 717 2 ENSG00000269549.2 RP3-461P17.10 chr20 45445431 45448580 + lincRNA NOVEL OTTHUMG00000032593.3 3150 3150 3 ENSG00000101443.16 WFDC2 chr20 45469706 45481532 + protein_coding KNOWN OTTHUMG00000032594.5 11827 1382 23 ENSG00000237464.1 RP3-461P17.9 chr20 45487613 45490248 + antisense NOVEL OTTHUMG00000032591.3 2636 355 2 ENSG00000237068.1 RPL5P2 chr20 45490818 45491671 - processed_pseudogene KNOWN OTTHUMG00000032583.1 854 854 1 ENSG00000101446.7 SPINT3 chr20 45512461 45515624 - protein_coding KNOWN OTTHUMG00000032585.5 3164 476 2 ENSG00000243543.7 WFDC6 chr20 45534196 45539495 - protein_coding KNOWN OTTHUMG00000046354.5 5300 792 6 ENSG00000232135.1 RP3-461P17.6 chr20 45536796 45537014 - processed_pseudogene KNOWN OTTHUMG00000032590.1 219 219 1 ENSG00000249139.1 EPPIN-WFDC6 chr20 45536986 45547426 - protein_coding KNOWN OTTHUMG00000161548.1 10441 1156 5 ENSG00000229900.1 HSPD1P21 chr20 45539983 45540227 - processed_pseudogene KNOWN OTTHUMG00000032589.1 245 245 1 ENSG00000101448.12 EPPIN chr20 45540626 45547752 - protein_coding KNOWN OTTHUMG00000032588.5 7127 6238 13 ENSG00000237401.5 LINC01304 chr2 3957655 3974070 - lincRNA NOVEL OTTHUMG00000151486.2 16416 3443 32 ENSG00000158901.10 WFDC8 chr20 45551153 45579326 - protein_coding KNOWN OTTHUMG00000046342.1 28174 1529 13 ENSG00000201923.1 RNA5SP485 chr20 45559758 45559876 - rRNA KNOWN NA 119 119 1 ENSG00000230860.1 CCNB1IP1P2 chr20 45567990 45568807 - processed_pseudogene KNOWN OTTHUMG00000032597.1 818 818 1 ENSG00000180205.3 WFDC9 chr20 45607939 45631268 - protein_coding KNOWN OTTHUMG00000046332.1 23330 659 5 ENSG00000180305.4 WFDC10A chr20 45629526 45631196 + protein_coding KNOWN OTTHUMG00000046331.2 1671 706 2 ENSG00000235508.3 RPS2P7 chr20 45640486 45641370 - processed_pseudogene KNOWN OTTHUMG00000032603.1 885 885 1 ENSG00000180083.9 WFDC11 chr20 45648563 45670270 - protein_coding KNOWN OTTHUMG00000046330.1 21708 654 14 ENSG00000182931.8 WFDC10B chr20 45684653 45705019 - protein_coding KNOWN OTTHUMG00000130227.2 20367 630 7 ENSG00000168634.4 WFDC13 chr20 45702016 45708817 + protein_coding KNOWN OTTHUMG00000046333.1 6802 1372 4 ENSG00000266071.1 MIR3617 chr20 45705102 45705180 - miRNA KNOWN NA 79 79 1 ENSG00000229550.1 AC012445.1 chr2 4136644 4140731 - lincRNA NOVEL OTTHUMG00000151487.1 4088 607 3 ENSG00000149651.3 SPINT4 chr20 45722351 45725830 + protein_coding KNOWN OTTHUMG00000130153.2 3480 512 3 ENSG00000226188.2 HNRNPA1P3 chr20 45745737 45746287 - processed_pseudogene KNOWN OTTHUMG00000032613.1 551 551 1 ENSG00000124116.17 WFDC3 chr20 45747944 45791932 - protein_coding KNOWN OTTHUMG00000032614.4 43989 2405 58 ENSG00000168630.3 SPINT5P chr20 45749920 45750074 + processed_pseudogene KNOWN OTTHUMG00000032611.2 155 155 1 ENSG00000221046.1 RNU6ATAC38P chr20 45778698 45778823 + snRNA KNOWN NA 126 126 1 ENSG00000101457.11 DNTTIP1 chr20 45791937 45811427 + protein_coding KNOWN OTTHUMG00000032610.1 19491 1883 49 ENSG00000175063.15 UBE2C chr20 45812576 45816957 + protein_coding KNOWN OTTHUMG00000033038.2 4382 1286 41 ENSG00000101470.8 TNNC2 chr20 45823214 45833745 - protein_coding KNOWN OTTHUMG00000032623.4 10532 876 13 ENSG00000124104.17 SNX21 chr20 45833810 45843275 + protein_coding KNOWN OTTHUMG00000032624.2 9466 4066 50 ENSG00000101473.15 ACOT8 chr20 45841721 45857406 - protein_coding KNOWN OTTHUMG00000033045.6 15686 4213 49 ENSG00000215960.2 AC068292.1 chr2 4228428 4228518 - miRNA NOVEL NA 91 91 1 ENSG00000277051.1 Metazoa_SRP chr20 45847630 45847940 - misc_RNA NOVEL NA 311 311 1 ENSG00000132801.6 ZSWIM3 chr20 45857617 45879122 + protein_coding KNOWN OTTHUMG00000032627.1 21506 2773 2 ENSG00000168612.4 ZSWIM1 chr20 45881227 45885266 + protein_coding KNOWN OTTHUMG00000074023.2 4040 2769 5 ENSG00000149634.4 SPATA25 chr20 45886489 45887635 - protein_coding KNOWN OTTHUMG00000032628.1 1147 757 2 ENSG00000124257.6 NEURL2 chr20 45888625 45891287 - protein_coding KNOWN OTTHUMG00000032626.2 2663 1301 4 ENSG00000064601.15 CTSA chr20 45890144 45898820 + protein_coding KNOWN OTTHUMG00000033078.14 8677 5856 128 ENSG00000271984.1 RP3-337O18.9 chr20 45892694 45893419 - antisense NOVEL OTTHUMG00000185813.1 726 569 2 ENSG00000100979.13 PLTP chr20 45898621 45912155 - protein_coding KNOWN OTTHUMG00000033047.4 13535 2541 74 ENSG00000100982.10 PCIF1 chr20 45934628 45948023 + protein_coding KNOWN OTTHUMG00000032635.3 13396 3219 25 ENSG00000198026.7 ZNF335 chr20 45948653 45972172 - protein_coding KNOWN OTTHUMG00000032637.1 23520 7521 37 ENSG00000231821.1 NPM1P48 chr2 4514204 4515056 - processed_pseudogene KNOWN OTTHUMG00000151582.1 853 853 1 ENSG00000235525.1 FTLP1 chr20 45975249 45976075 - processed_pseudogene KNOWN OTTHUMG00000032630.1 827 526 2 ENSG00000100985.7 MMP9 chr20 46008908 46016561 + protein_coding KNOWN OTTHUMG00000033044.1 7654 2336 13 ENSG00000204044.6 RP11-465L10.10 chr20 46013500 46022073 - antisense NOVEL OTTHUMG00000032629.3 8574 2244 5 ENSG00000124140.11 SLC12A5 chr20 46021690 46060152 + protein_coding KNOWN OTTHUMG00000032638.6 38463 8778 170 ENSG00000124160.10 NCOA5 chr20 46060985 46089952 - protein_coding KNOWN OTTHUMG00000032639.4 28968 3220 12 ENSG00000213820.3 RPL13P2 chr20 46099518 46100176 + processed_pseudogene KNOWN OTTHUMG00000032642.1 659 659 1 ENSG00000101017.12 CD40 chr20 46118272 46129863 + protein_coding KNOWN OTTHUMG00000033053.3 11592 2527 53 ENSG00000229957.1 RP5-998H6.2 chr20 46168404 46171237 - lincRNA NOVEL OTTHUMG00000032644.1 2834 2137 2 ENSG00000149654.8 CDH22 chr20 46173733 46308498 - protein_coding KNOWN OTTHUMG00000033073.1 134766 4929 28 ENSG00000080189.13 SLC35C2 chr20 46345980 46364458 - protein_coding KNOWN OTTHUMG00000033050.3 18479 7708 92 ENSG00000231532.4 LINC01249 chr2 4628222 4656215 - lincRNA NOVEL OTTHUMG00000151581.1 27994 3099 11 ENSG00000273828.1 RP11-394O2.3 chr20 46364551 46390885 + antisense NOVEL OTTHUMG00000186920.2 26335 594 5 ENSG00000062598.16 ELMO2 chr20 46366049 46432985 - protein_coding KNOWN OTTHUMG00000033070.5 66937 6598 197 ENSG00000215452.3 ZNF663P chr20 46414228 46459276 - unitary_pseudogene KNOWN OTTHUMG00000032648.2 45049 3030 5 ENSG00000225849.1 RP5-981L23.2 chr20 46463902 46465124 - processed_pseudogene KNOWN OTTHUMG00000032649.1 1223 1223 1 ENSG00000184617.10 ZNF840P chr20 46484461 46492640 + unprocessed_pseudogene KNOWN OTTHUMG00000032647.2 8180 1996 3 ENSG00000198185.10 ZNF334 chr20 46499630 46513559 - protein_coding KNOWN OTTHUMG00000032654.4 13930 6865 28 ENSG00000149635.2 OCSTAMP chr20 46540946 46550574 - protein_coding KNOWN OTTHUMG00000032652.2 9629 2043 3 ENSG00000158296.12 SLC13A3 chr20 46557823 46684467 - protein_coding KNOWN OTTHUMG00000033042.7 126645 6055 102 ENSG00000273893.1 RP1-101A2.1 chr20 46681676 46682375 - sense_intronic NOVEL OTTHUMG00000186929.1 700 700 1 ENSG00000172315.5 TP53RK chr20 46684365 46689779 - protein_coding KNOWN OTTHUMG00000085887.1 5415 3520 4 ENSG00000252238.1 SNORA31 chr2 4827001 4827084 - snoRNA NOVEL NA 84 84 1 ENSG00000271784.1 RP1-28H20.3 chr20 46689659 46690289 + lincRNA NOVEL OTTHUMG00000185332.1 631 631 1 ENSG00000197496.5 SLC2A10 chr20 46709487 46736347 + protein_coding KNOWN OTTHUMG00000032657.4 26861 5000 9 ENSG00000222874.1 RN7SKP33 chr20 46859333 46859672 + misc_RNA KNOWN NA 340 340 1 ENSG00000235922.1 RP11-323C15.1 chr20 46863563 46864104 - processed_pseudogene KNOWN OTTHUMG00000032660.2 542 542 1 ENSG00000064655.17 EYA2 chr20 46894624 47188844 + protein_coding KNOWN OTTHUMG00000033041.7 294221 3618 89 ENSG00000236028.1 RP11-323C15.2 chr20 46901143 46901726 - lincRNA NOVEL OTTHUMG00000032661.1 584 423 2 ENSG00000226769.1 GAPDHP54 chr20 46997596 46998488 + processed_pseudogene KNOWN OTTHUMG00000032662.1 893 893 1 ENSG00000239783.1 RP5-1050K3.3 chr20 47071865 47072236 + processed_pseudogene KNOWN OTTHUMG00000032663.1 372 372 1 ENSG00000215450.2 RP5-890O15.3 chr20 47160838 47161700 - processed_pseudogene KNOWN OTTHUMG00000032664.3 863 863 1 ENSG00000264901.1 MIR3616 chr20 47166967 47167058 + miRNA KNOWN NA 92 92 1 ENSG00000055070.15 SZRD1 chr1 16352575 16398145 + protein_coding KNOWN OTTHUMG00000002217.4 45571 4747 40 ENSG00000207192.1 RNU6-649P chr2 4945277 4945383 + snRNA KNOWN NA 107 107 1 ENSG00000101040.18 ZMYND8 chr20 47209214 47356889 - protein_coding KNOWN OTTHUMG00000032667.9 147676 7625 400 ENSG00000267882.2 RP4-569M23.5 chr20 47318502 47320754 + antisense NOVEL OTTHUMG00000187320.2 2253 2253 1 ENSG00000273451.1 RP4-569M23.4 chr20 47348137 47349142 - sense_intronic NOVEL OTTHUMG00000185861.1 1006 1006 1 ENSG00000231119.2 RP4-569M23.2 chr20 47352561 47354633 + antisense NOVEL OTTHUMG00000032668.2 2073 1809 2 ENSG00000224565.1 RP1-148H17.1 chr20 47391929 47412327 - lincRNA NOVEL OTTHUMG00000032669.1 20399 750 4 ENSG00000234075.1 RPL35AP chr20 47478214 47479010 - processed_pseudogene KNOWN OTTHUMG00000032670.2 797 326 2 ENSG00000202186.1 RNU6-497P chr20 47484278 47484381 - snRNA KNOWN NA 104 104 1 ENSG00000201742.1 RNU6-563P chr20 47492978 47493085 - snRNA KNOWN NA 108 108 1 ENSG00000124151.17 NCOA3 chr20 47501902 47656877 + protein_coding KNOWN OTTHUMG00000033061.3 154976 8402 75 ENSG00000221294.1 AL021394.1 chr20 47570935 47571015 + miRNA NOVEL NA 81 81 1 ENSG00000228585.1 AC073143.1 chr2 5313740 5314134 - processed_pseudogene KNOWN OTTHUMG00000151417.1 395 395 1 ENSG00000229853.1 RP5-1049G16.4 chr20 47630266 47631438 - processed_pseudogene KNOWN OTTHUMG00000032671.1 1173 860 2 ENSG00000280970.1 AL034418.1 chr20 47651067 47651156 + miRNA NOVEL NA 90 90 1 ENSG00000196562.13 SULF2 chr20 47656348 47786616 - protein_coding KNOWN OTTHUMG00000032675.9 130269 6657 94 ENSG00000255438.2 CTD-2653D5.1 chr20 47677901 47686297 + antisense NOVEL OTTHUMG00000167583.2 8397 2437 4 ENSG00000238950.1 RNU7-173P chr20 47826969 47827044 - snRNA KNOWN NA 76 76 1 ENSG00000215448.3 SRMP1 chr20 47859788 47860672 + processed_pseudogene KNOWN OTTHUMG00000032673.1 885 885 1 ENSG00000251770.1 RNA5SP486 chr20 47873191 47873273 + rRNA KNOWN NA 83 83 1 ENSG00000238785.1 RNU7-92P chr20 47904348 47904423 + snRNA KNOWN NA 76 76 1 ENSG00000234967.1 RP11-347D21.1 chr20 47950799 47952055 + lincRNA NOVEL OTTHUMG00000032676.1 1257 425 2 ENSG00000228503.1 RP11-347D21.2 chr20 47958022 47958603 + lincRNA NOVEL OTTHUMG00000032677.1 582 456 2 ENSG00000232835.1 AC107057.1 chr2 5549780 5556031 - lincRNA NOVEL OTTHUMG00000151420.1 6252 319 2 ENSG00000237423.1 LINC01522 chr20 47980488 47988744 - lincRNA NOVEL OTTHUMG00000032678.1 8257 429 2 ENSG00000229522.1 LINC01523 chr20 47983404 47984313 + lincRNA NOVEL OTTHUMG00000032679.1 910 450 2 ENSG00000276923.1 RP11-321P16.1 chr20 48073869 48074188 + lincRNA NOVEL OTTHUMG00000186935.1 320 320 1 ENSG00000276815.1 AL139351.1 chr20 48090129 48090218 + miRNA NOVEL NA 90 90 1 ENSG00000235621.7 LINC00494 chr20 48359950 48370629 + lincRNA NOVEL OTTHUMG00000032682.1 10680 4204 14 ENSG00000236874.1 RP1-66N13.1 chr20 48383323 48384895 - lincRNA NOVEL OTTHUMG00000032680.1 1573 404 2 ENSG00000274261.1 RP1-66N13.4 chr20 48407367 48410716 + lincRNA NOVEL OTTHUMG00000186937.1 3350 318 3 ENSG00000281365.1 RP5-991B18.1 chr20 48471308 48472414 + lincRNA NOVEL OTTHUMG00000189697.1 1107 642 2 ENSG00000281460.1 RP5-991B18.2 chr20 48476999 48477553 + lincRNA NOVEL OTTHUMG00000189698.1 555 555 1 ENSG00000238452.1 RNU7-144P chr20 48494234 48494309 - snRNA KNOWN NA 76 76 1 ENSG00000224128.1 LINC01248 chr2 5602505 5691488 - antisense NOVEL OTTHUMG00000151424.1 88984 468 2 ENSG00000124126.12 PREX1 chr20 48624252 48827883 - protein_coding KNOWN OTTHUMG00000032685.4 203632 7393 65 ENSG00000251876.1 AL035106.1 chr20 48739330 48739448 - miRNA NOVEL NA 119 119 1 ENSG00000278231.1 RP5-906C1.1 chr20 48821688 48849458 - lincRNA NOVEL OTTHUMG00000186941.1 27771 366 2 ENSG00000124198.8 ARFGEF2 chr20 48921890 49036693 + protein_coding KNOWN OTTHUMG00000032687.1 114804 8945 41 ENSG00000230758.1 SNAP23P chr20 49038357 49038602 - processed_pseudogene KNOWN OTTHUMG00000032689.1 246 246 1 ENSG00000227431.4 CSE1L-AS1 chr20 49040463 49046044 - antisense NOVEL OTTHUMG00000032688.1 5582 556 5 ENSG00000124207.15 CSE1L chr20 49046246 49096960 + protein_coding KNOWN OTTHUMG00000033046.3 50715 3800 55 ENSG00000124214.18 STAU1 chr20 49113339 49188367 - protein_coding KNOWN OTTHUMG00000032691.5 75029 4094 117 ENSG00000226284.1 ARPC3P1 chr20 49134480 49135012 + processed_pseudogene KNOWN OTTHUMG00000032694.3 533 533 1 ENSG00000124228.13 DDX27 chr20 49219295 49244077 + protein_coding KNOWN OTTHUMG00000033072.4 24783 5457 104 ENSG00000230090.4 AC108025.2 chr2 5618327 5691118 - processed_transcript NOVEL OTTHUMG00000151425.2 72792 1115 10 ENSG00000124201.13 ZNFX1 chr20 49237946 49278426 - protein_coding KNOWN OTTHUMG00000032696.5 40481 9340 62 ENSG00000177410.11 ZFAS1 chr20 49278178 49295738 + antisense KNOWN OTTHUMG00000032698.5 17561 2243 41 ENSG00000277830.1 ZNFX1-AS1_1 chr20 49278427 49278624 + misc_RNA NOVEL NA 198 198 1 ENSG00000209042.1 SNORD12C chr20 49278940 49279028 + snoRNA KNOWN NA 89 89 1 ENSG00000274760.1 ZNFX1-AS1_2 chr20 49279116 49279208 + misc_RNA NOVEL NA 93 93 1 ENSG00000222365.1 SNORD12B chr20 49280319 49280409 + snoRNA KNOWN NA 91 91 1 ENSG00000277967.1 ZNFX1-AS1_3 chr20 49280485 49280571 + misc_RNA NOVEL NA 87 87 1 ENSG00000212304.1 SNORD12 chr20 49280683 49280772 + snoRNA KNOWN NA 90 90 1 ENSG00000158445.7 KCNB1 chr20 49363877 49482647 - protein_coding KNOWN OTTHUMG00000033051.3 118771 11850 2 ENSG00000124212.5 PTGIS chr20 49503874 49568146 - protein_coding KNOWN OTTHUMG00000033077.3 64273 5579 19 ENSG00000176887.6 SOX11 chr2 5692667 5701385 + protein_coding KNOWN OTTHUMG00000090333.1 8719 8719 1 ENSG00000265225.1 AL118525.1 chr20 49586681 49586774 + miRNA NOVEL NA 94 94 1 ENSG00000158470.5 B4GALT5 chr20 49632945 49713878 - protein_coding KNOWN OTTHUMG00000033086.3 80934 4722 9 ENSG00000276031.1 Metazoa_SRP chr20 49721949 49722247 + misc_RNA NOVEL NA 299 299 1 ENSG00000231878.1 SNRPFP1 chr20 49729591 49729842 - processed_pseudogene KNOWN OTTHUMG00000032701.1 252 252 1 ENSG00000252540.1 RNU6-919P chr20 49794811 49794914 + snRNA KNOWN NA 104 104 1 ENSG00000197818.10 SLC9A8 chr20 49812713 49892242 + protein_coding KNOWN OTTHUMG00000032710.4 79530 6946 36 ENSG00000237788.1 RP5-1041C10.3 chr20 49829125 49831085 + processed_pseudogene KNOWN OTTHUMG00000032703.1 1961 1653 2 ENSG00000158480.9 SPATA2 chr20 49903391 49915508 - protein_coding KNOWN OTTHUMG00000032704.1 12118 4270 6 ENSG00000199490.1 Y_RNA chr20 49920597 49920694 - misc_RNA NOVEL NA 98 98 1 ENSG00000269103.2 Metazoa_SRP chr20 49932795 49933078 + misc_RNA NOVEL NA 284 284 1 ENSG00000242540.2 AC010729.1 chr2 5696220 5708095 + 3prime_overlapping_ncrna NOVEL OTTHUMG00000151423.2 11876 1199 4 ENSG00000124226.9 RNF114 chr20 49936336 49953892 + protein_coding KNOWN OTTHUMG00000032709.2 17557 4344 38 ENSG00000229222.1 KRT18P4 chr20 49956745 49958032 + processed_pseudogene KNOWN OTTHUMG00000032705.1 1288 1288 1 ENSG00000206710.1 RNU6-147P chr20 49972106 49972212 + snRNA KNOWN NA 107 107 1 ENSG00000124216.3 SNAI1 chr20 49982999 49988886 + protein_coding KNOWN OTTHUMG00000033048.1 5888 1686 3 ENSG00000231265.1 TRERNA1 chr20 50040716 50041504 - lincRNA NOVEL OTTHUMG00000032711.1 789 462 2 ENSG00000244687.10 UBE2V1 chr20 50081124 50115959 - protein_coding KNOWN OTTHUMG00000152626.6 34836 4818 91 ENSG00000124208.16 TMEM189-UBE2V1 chr20 50081124 50153637 - protein_coding KNOWN OTTHUMG00000033085.12 72514 2757 8 ENSG00000240849.9 TMEM189 chr20 50118254 50153734 - protein_coding KNOWN OTTHUMG00000152625.4 35481 7931 29 ENSG00000237595.3 RP11-112L6.3 chr20 50162765 50166102 - lincRNA NOVEL OTTHUMG00000032717.3 3338 1064 4 ENSG00000234698.1 RP11-112L6.2 chr20 50166362 50171742 + lincRNA NOVEL OTTHUMG00000032716.1 5381 616 4 ENSG00000236106.1 AC010729.2 chr2 5726449 5730342 + lincRNA NOVEL OTTHUMG00000151422.1 3894 1746 2 ENSG00000231742.4 LINC01273 chr20 50172550 50176671 + lincRNA NOVEL OTTHUMG00000032718.2 4122 894 6 ENSG00000277449.1 CEBPB-AS1 chr20 50184598 50191498 - antisense NOVEL OTTHUMG00000186944.1 6901 2648 6 ENSG00000172216.5 CEBPB chr20 50190734 50192689 + protein_coding KNOWN OTTHUMG00000032715.1 1956 1956 1 ENSG00000224397.4 LINC01272 chr20 50267486 50279795 + lincRNA NOVEL OTTHUMG00000032721.1 12310 2451 15 ENSG00000203999.7 LINC01270 chr20 50292720 50314922 + lincRNA NOVEL OTTHUMG00000032719.1 22203 3014 7 ENSG00000233077.1 LINC01271 chr20 50310711 50321342 - lincRNA NOVEL OTTHUMG00000032720.1 10632 2250 3 ENSG00000244376.3 RN7SL636P chr20 50429190 50429483 - misc_RNA KNOWN NA 294 294 1 ENSG00000231715.1 COX6CP2 chr20 50479767 50479991 + processed_pseudogene KNOWN OTTHUMG00000032722.1 225 225 1 ENSG00000196396.8 PTPN1 chr20 50510321 50585241 + protein_coding KNOWN OTTHUMG00000032729.3 74921 4041 19 ENSG00000239742.3 RN7SL672P chr20 50557682 50557998 - misc_RNA KNOWN NA 317 317 1 ENSG00000237266.1 AC010729.3 chr2 5810641 5812596 - lincRNA NOVEL OTTHUMG00000151421.1 1956 411 4 ENSG00000201501.1 Y_RNA chr20 50563009 50563110 + misc_RNA NOVEL NA 102 102 1 ENSG00000232043.1 RP4-530I15.9 chr20 50570975 50578041 - antisense NOVEL OTTHUMG00000133695.1 7067 4587 2 ENSG00000208018.1 MIR645 chr20 50585786 50585879 + miRNA KNOWN NA 94 94 1 ENSG00000042062.10 FAM65C chr20 50586108 50691528 - protein_coding KNOWN OTTHUMG00000032724.2 105421 6009 71 ENSG00000221091.1 MIR1302-5 chr20 50614636 50614785 - miRNA KNOWN NA 150 150 1 ENSG00000231302.1 RPL36P2 chr20 50620763 50621077 + processed_pseudogene KNOWN OTTHUMG00000032728.1 315 315 1 ENSG00000278453.1 AL133230.1 chr20 50622189 50622299 - miRNA NOVEL NA 111 111 1 ENSG00000234693.1 RP4-530I15.6 chr20 50645471 50662275 + antisense NOVEL OTTHUMG00000032727.2 16805 964 7 ENSG00000124171.7 PARD6B chr20 50731544 50756795 + protein_coding KNOWN OTTHUMG00000032732.2 25252 4726 6 ENSG00000124243.16 BCAS4 chr20 50794894 50882676 + protein_coding KNOWN OTTHUMG00000032735.6 87783 7583 31 ENSG00000232044.6 LINC01105 chr2 5932687 6001275 + processed_transcript NOVEL OTTHUMG00000151462.2 68589 8200 18 ENSG00000230043.1 TMSB4XP6 chr20 50840615 50840749 - processed_pseudogene KNOWN OTTHUMG00000074021.1 135 135 1 ENSG00000265062.1 AL133228.1 chr20 50860908 50860986 + miRNA NOVEL NA 79 79 1 ENSG00000101126.14 ADNP chr20 50888919 50931240 - protein_coding KNOWN OTTHUMG00000032737.18 42322 7081 27 ENSG00000228663.1 PSMD10P1 chr20 50913731 50914411 + processed_pseudogene KNOWN OTTHUMG00000032736.1 681 681 1 ENSG00000259456.3 ADNP-AS1 chr20 50930984 50945134 + antisense NOVEL OTTHUMG00000172534.3 14151 927 6 ENSG00000000419.11 DPM1 chr20 50934867 50958555 - protein_coding KNOWN OTTHUMG00000032742.2 23689 1207 53 ENSG00000265582.1 AL034553.1 chr20 50938646 50938732 + miRNA NOVEL NA 87 87 1 ENSG00000124217.4 MOCS3 chr20 50958826 50963931 + protein_coding KNOWN OTTHUMG00000032741.4 5106 5106 1 ENSG00000232358.1 RP5-955M13.4 chr20 50999370 51010019 + antisense NOVEL OTTHUMG00000134277.2 10650 802 3 ENSG00000026559.12 KCNG1 chr20 51003656 51023129 - protein_coding KNOWN OTTHUMG00000032745.6 19474 5437 18 ENSG00000226457.1 RP11-430L17.1 chr1 16369150 16369530 - processed_pseudogene KNOWN OTTHUMG00000002215.1 381 381 1 ENSG00000276733.1 MIR7158 chr2 5974662 5974732 + miRNA KNOWN NA 71 71 1 ENSG00000279835.1 RP4-811M8.1 chr20 51098138 51098845 + TEC KNOWN OTTHUMG00000175632.1 708 708 1 ENSG00000228820.2 RPSAP1 chr20 51130788 51131667 - processed_pseudogene KNOWN OTTHUMG00000032746.1 880 880 1 ENSG00000263592.1 AL035457.1 chr20 51177505 51177599 + miRNA NOVEL NA 95 95 1 ENSG00000263645.1 AL079339.1 chr20 51377235 51377321 - miRNA NOVEL NA 87 87 1 ENSG00000101096.18 NFATC2 chr20 51386957 51562831 - protein_coding KNOWN OTTHUMG00000032747.3 175875 8286 66 ENSG00000266761.1 MIR3194 chr20 51452905 51452977 - miRNA KNOWN NA 73 73 1 ENSG00000054793.12 ATP9A chr20 51596514 51768634 - protein_coding KNOWN OTTHUMG00000032751.3 172121 8317 54 ENSG00000275370.1 AL138807.1 chr20 51717854 51717962 + miRNA NOVEL NA 109 109 1 ENSG00000215444.2 RP5-827A12.2 chr20 51734533 51735067 + processed_pseudogene KNOWN OTTHUMG00000032749.1 535 459 2 ENSG00000101115.11 SALL4 chr20 51784042 51802520 - protein_coding KNOWN OTTHUMG00000032752.3 18479 4061 17 ENSG00000234275.1 AC017053.1 chr2 6312954 6325646 - lincRNA NOVEL OTTHUMG00000151460.1 12693 579 3 ENSG00000227964.1 LINC01429 chr20 51831797 51862912 - lincRNA NOVEL OTTHUMG00000134283.1 31116 2326 3 ENSG00000252467.1 RNU6-347P chr20 51902291 51902395 + snRNA KNOWN NA 105 105 1 ENSG00000252654.1 RNU7-6P chr20 51904969 51905030 + snRNA KNOWN NA 62 62 1 ENSG00000020256.18 ZFP64 chr20 52051663 52204308 - protein_coding KNOWN OTTHUMG00000032756.2 152646 6997 68 ENSG00000233347.1 ERP29P1 chr20 52110344 52111049 - processed_pseudogene KNOWN OTTHUMG00000032754.1 706 706 1 ENSG00000234948.1 LINC01524 chr20 52210645 52650431 + lincRNA NOVEL OTTHUMG00000134297.2 439787 4883 10 ENSG00000276817.1 AL121923.1 chr20 52241185 52241266 + miRNA NOVEL NA 82 82 1 ENSG00000225785.1 RP4-583K8.1 chr20 52451464 52455619 - lincRNA NOVEL OTTHUMG00000032757.2 4156 431 3 ENSG00000275958.1 uc_338 chr20 52482801 52482991 - misc_RNA NOVEL NA 191 191 1 ENSG00000232465.1 RP5-1022J11.2 chr20 52487922 52500591 - lincRNA NOVEL OTTHUMG00000134296.1 12670 573 2 ENSG00000227007.1 LINC01247 chr2 6366010 6375422 - lincRNA NOVEL OTTHUMG00000151457.1 9413 4209 3 ENSG00000234821.1 MRPS33P4 chr20 52511252 52511568 + processed_pseudogene KNOWN OTTHUMG00000032758.1 317 317 1 ENSG00000232294.4 RP4-715N11.2 chr20 52671917 52690929 + lincRNA NOVEL OTTHUMG00000032760.2 19013 1173 21 ENSG00000232286.1 RP11-80K6.2 chr20 52858338 52862855 - lincRNA NOVEL OTTHUMG00000033074.2 4518 459 2 ENSG00000230636.1 RPL36P1 chr20 52890162 52890386 + processed_pseudogene KNOWN OTTHUMG00000032761.1 225 225 1 ENSG00000182463.14 TSHZ2 chr20 52972407 53495330 + protein_coding KNOWN OTTHUMG00000033058.8 522924 12581 12 ENSG00000252629.1 AL050316.1 chr20 53062617 53062701 + miRNA NOVEL NA 85 85 1 ENSG00000199218.1 RN7SKP184 chr20 53097652 53097984 + misc_RNA KNOWN NA 333 333 1 ENSG00000223492.1 RP11-15M15.1 chr20 53168643 53179550 - antisense NOVEL OTTHUMG00000134301.1 10908 1620 2 ENSG00000227705.1 RP11-15M15.2 chr20 53196229 53208705 - antisense NOVEL OTTHUMG00000134300.1 12477 485 5 ENSG00000271774.1 RP4-678D15.1 chr20 53255979 53487274 - antisense NOVEL OTTHUMG00000185603.1 231296 724 3 ENSG00000231610.1 AC021021.1 chr2 6495877 6496798 - processed_pseudogene KNOWN OTTHUMG00000151459.1 922 922 1 ENSG00000231703.2 RP4-669H2.1 chr20 53397661 53412910 - antisense NOVEL OTTHUMG00000033066.2 15250 3280 3 ENSG00000224530.1 PPIAP10 chr20 53421199 53421656 + processed_pseudogene KNOWN OTTHUMG00000032762.1 458 458 1 ENSG00000259723.1 RP5-823G15.5 chr20 53453058 53504314 - antisense NOVEL OTTHUMG00000172541.1 51257 542 4 ENSG00000206959.1 Y_RNA chr20 53544615 53544725 + misc_RNA NOVEL NA 111 111 1 ENSG00000197670.6 RP4-724E16.2 chr20 53552770 53575863 + antisense NOVEL OTTHUMG00000032765.3 23094 2502 6 ENSG00000171940.12 ZNF217 chr20 53567065 53609907 - protein_coding KNOWN OTTHUMG00000032764.3 42843 6181 20 ENSG00000235415.1 AC005808.3 chr20 53608354 53634590 + lincRNA NOVEL OTTHUMG00000032767.2 26237 381 3 ENSG00000238468.1 RNU7-14P chr20 53668697 53668758 - snRNA KNOWN NA 62 62 1 ENSG00000225563.1 AC006076.1 chr20 53799823 53801318 - lincRNA NOVEL OTTHUMG00000032768.1 1496 345 2 ENSG00000241721.1 SUMO1P1 chr20 53875252 53875557 - processed_pseudogene KNOWN OTTHUMG00000032770.2 306 306 1 ENSG00000226488.1 AC021021.2 chr2 6496003 6503806 + lincRNA NOVEL OTTHUMG00000151461.1 7804 528 3 ENSG00000064787.11 BCAS1 chr20 53936777 54070594 - protein_coding KNOWN OTTHUMG00000032772.2 133818 8186 49 ENSG00000236352.1 AC005220.3 chr20 53940160 53942508 + antisense NOVEL OTTHUMG00000032769.1 2349 884 3 ENSG00000265595.1 MIR4756 chr20 54068408 54068485 - miRNA KNOWN NA 78 78 1 ENSG00000019186.8 CYP24A1 chr20 54153449 54173973 - protein_coding KNOWN OTTHUMG00000032773.2 20525 3972 39 ENSG00000101132.8 PFDN4 chr20 54207847 54228052 + protein_coding KNOWN OTTHUMG00000032775.4 20206 1975 21 ENSG00000280041.1 AL133335.1 chr20 54249953 54250327 + protein_coding KNOWN NA 375 375 1 ENSG00000274453.1 AL389883.1 chr20 54376458 54376558 + miRNA NOVEL NA 101 101 1 ENSG00000101134.10 DOK5 chr20 54475597 54651171 + protein_coding KNOWN OTTHUMG00000032778.2 175575 2604 20 ENSG00000252089.1 RNU4ATAC7P chr20 54859688 54859812 - snRNA KNOWN NA 125 125 1 ENSG00000185834.10 RPL12P4 chr20 55074644 55075140 + processed_pseudogene KNOWN OTTHUMG00000032779.1 497 497 1 ENSG00000236172.5 MIR7515HG chr2 6615389 6650535 - lincRNA KNOWN OTTHUMG00000151631.4 35147 7129 335 ENSG00000235166.6 LINC01440 chr20 55408898 55482777 + lincRNA NOVEL OTTHUMG00000032780.6 73880 3782 41 ENSG00000224008.1 LINC01441 chr20 55420336 55427197 - lincRNA NOVEL OTTHUMG00000134311.1 6862 2290 3 ENSG00000275923.1 RP5-837G17.1 chr20 55504906 55505215 - lincRNA NOVEL OTTHUMG00000188363.1 310 310 1 ENSG00000054803.3 CBLN4 chr20 55997440 56005472 - protein_coding KNOWN OTTHUMG00000032782.2 8033 3024 3 ENSG00000222118.1 RNA5SP487 chr20 56205052 56205173 - rRNA KNOWN NA 122 122 1 ENSG00000124089.4 MC3R chr20 56248732 56249815 + protein_coding KNOWN OTTHUMG00000032785.2 1084 1084 1 ENSG00000235594.1 RP11-380D15.2 chr20 56267872 56269231 + processed_pseudogene KNOWN OTTHUMG00000032783.2 1360 1095 2 ENSG00000230843.1 RP11-380D15.3 chr20 56295967 56299160 - lincRNA NOVEL OTTHUMG00000032784.1 3194 453 2 ENSG00000124098.9 FAM210B chr20 56358915 56368663 + protein_coding KNOWN OTTHUMG00000032793.2 9749 3577 5 ENSG00000087586.16 AURKA chr20 56369389 56392337 - protein_coding KNOWN OTTHUMG00000032796.6 22949 2928 106 ENSG00000205837.6 LINC00487 chr2 6728177 6770311 - lincRNA NOVEL OTTHUMG00000151630.2 42135 2202 13 ENSG00000101138.10 CSTF1 chr20 56392371 56406369 + protein_coding KNOWN OTTHUMG00000032791.7 13999 4800 35 ENSG00000087589.15 CASS4 chr20 56412112 56460387 + protein_coding KNOWN OTTHUMG00000032788.3 48276 5069 17 ENSG00000228601.1 RPL39P chr20 56459428 56459583 - processed_pseudogene KNOWN OTTHUMG00000032789.1 156 156 1 ENSG00000212084.2 AL121914.1 chr20 56460266 56460357 - miRNA NOVEL NA 92 92 1 ENSG00000022277.11 RTFDC1 chr20 56468585 56519449 + protein_coding KNOWN OTTHUMG00000032801.3 50865 4063 59 ENSG00000124091.8 GCNT7 chr20 56491492 56525925 - protein_coding KNOWN OTTHUMG00000032798.2 34434 2064 11 ENSG00000124103.8 FAM209A chr20 56517187 56526142 + protein_coding KNOWN OTTHUMG00000032799.2 8956 1137 6 ENSG00000280387.1 RP5-1153D9.5 chr20 56522252 56523499 + TEC KNOWN OTTHUMG00000186869.1 1248 1248 1 ENSG00000213714.1 FAM209B chr20 56533246 56536520 + protein_coding KNOWN OTTHUMG00000032800.1 3275 694 2 ENSG00000225657.2 RP5-843L14.1 chr20 56577563 56598621 + lincRNA NOVEL OTTHUMG00000032803.2 21059 996 8 ENSG00000225964.4 NRIR chr2 6828514 6840464 - antisense NOVEL OTTHUMG00000151730.1 11951 973 7 ENSG00000214541.3 RPS4XP3 chr20 56601701 56602113 + processed_pseudogene KNOWN OTTHUMG00000032802.1 413 413 1 ENSG00000087510.6 TFAP2C chr20 56629302 56639283 + protein_coding KNOWN OTTHUMG00000032805.2 9982 3005 9 ENSG00000252091.1 RNU6-1146P chr20 56667430 56667531 + snRNA KNOWN NA 102 102 1 ENSG00000241821.3 RN7SL170P chr20 56688401 56688695 + misc_RNA KNOWN NA 295 295 1 ENSG00000237000.1 PTMAP6 chr20 56700837 56701514 - processed_pseudogene KNOWN OTTHUMG00000032804.2 678 327 2 ENSG00000221416.1 AL133232.1 chr20 56718886 56718969 + miRNA NOVEL NA 84 84 1 ENSG00000231604.2 RP5-897D18.1 chr20 56730397 56731460 + lincRNA NOVEL OTTHUMG00000032807.2 1064 483 2 ENSG00000207158.1 RNU6-929P chr20 56785981 56786087 - snRNA KNOWN NA 107 107 1 ENSG00000251772.1 AL117380.2 chr20 57000087 57000157 + miRNA NOVEL NA 71 71 1 ENSG00000238644.1 AL117380.1 chr20 57054790 57054841 + miRNA NOVEL NA 52 52 1 ENSG00000134326.10 CMPK2 chr2 6840570 6866635 - protein_coding KNOWN OTTHUMG00000151629.2 26066 4302 31 ENSG00000231078.1 RP11-560A15.4 chr20 57105741 57107128 + lincRNA NOVEL OTTHUMG00000032809.1 1388 377 3 ENSG00000203266.2 RP11-560A15.3 chr20 57114915 57122092 + lincRNA NOVEL OTTHUMG00000032808.2 7178 770 3 ENSG00000280220.1 RP11-560A15.6 chr20 57161822 57163775 + TEC KNOWN OTTHUMG00000175577.1 1954 1954 1 ENSG00000101144.11 BMP7 chr20 57168748 57266629 - protein_coding KNOWN OTTHUMG00000032812.3 97882 5418 42 ENSG00000235032.1 BMP7-AS1 chr20 57214872 57215866 + antisense NOVEL OTTHUMG00000032810.1 995 436 2 ENSG00000226308.1 RP4-813D12.3 chr20 57266797 57282998 + lincRNA NOVEL OTTHUMG00000032811.2 16202 1293 5 ENSG00000252064.1 Y_RNA chr20 57311854 57311958 + misc_RNA NOVEL NA 105 105 1 ENSG00000266666.1 MIR4325 chr20 57321502 57321591 - miRNA KNOWN NA 90 90 1 ENSG00000231005.1 RP3-481F12.1 chr20 57328546 57328696 + processed_pseudogene KNOWN OTTHUMG00000032815.1 151 151 1 ENSG00000054796.11 SPO11 chr20 57329759 57343994 + protein_coding KNOWN OTTHUMG00000032817.7 14236 1867 54 ENSG00000220999.3 AC017076.1 chr2 6855090 6855177 - miRNA NOVEL NA 88 88 1 ENSG00000101146.11 RAE1 chr20 57351010 57379211 + protein_coding KNOWN OTTHUMG00000032819.3 28202 5855 78 ENSG00000228995.1 MTND1P9 chr20 57357426 57358369 - processed_pseudogene KNOWN OTTHUMG00000032816.1 944 944 1 ENSG00000256222.2 MTRNR2L3 chr20 57358442 57359980 - protein_coding KNOWN OTTHUMG00000184962.2 1539 1539 1 ENSG00000218018.2 RP4-800J21.3 chr20 57384160 57393062 - antisense NOVEL OTTHUMG00000134335.1 8903 1540 2 ENSG00000132819.15 RBM38 chr20 57391407 57409333 + protein_coding KNOWN OTTHUMG00000032820.6 17927 2686 21 ENSG00000124097.7 HMGB1P1 chr20 57488392 57489027 - processed_pseudogene KNOWN OTTHUMG00000032823.3 636 636 1 ENSG00000124092.11 CTCFL chr20 57495966 57525652 - protein_coding KNOWN OTTHUMG00000032829.7 29687 8928 186 ENSG00000124253.10 PCK1 chr20 57561080 57568112 + protein_coding KNOWN OTTHUMG00000032825.3 7033 6819 23 ENSG00000227297.1 RP4-718J7.4 chr20 57599695 57601200 - lincRNA NOVEL OTTHUMG00000032826.2 1506 823 2 ENSG00000124256.13 ZBP1 chr20 57603846 57620576 - protein_coding KNOWN OTTHUMG00000032824.3 16731 5405 44 ENSG00000187144.10 SPATA21 chr1 16387117 16437424 - protein_coding KNOWN OTTHUMG00000002312.3 50308 4506 55 ENSG00000134321.10 RSAD2 chr2 6865806 6898239 + protein_coding KNOWN OTTHUMG00000090352.3 32434 4834 16 ENSG00000124225.14 PMEPA1 chr20 57648392 57711536 - protein_coding KNOWN OTTHUMG00000032831.2 63145 5619 31 ENSG00000278709.1 RP5-1059L7.1 chr20 57710183 57712780 + antisense NOVEL OTTHUMG00000186958.1 2598 2598 3 ENSG00000263453.1 MIR4532 chr20 57895394 57895444 + miRNA KNOWN NA 51 51 1 ENSG00000221007.1 AL354984.1 chr20 57918884 57919035 + miRNA NOVEL NA 152 152 1 ENSG00000203971.1 RP13-379L11.2 chr20 57957126 57959660 - lincRNA NOVEL OTTHUMG00000137362.1 2535 1854 2 ENSG00000221451.1 AL354984.3 chr20 57976018 57976093 + miRNA NOVEL NA 76 76 1 ENSG00000275852.1 RP13-379L11.4 chr20 58003904 58004648 + lincRNA NOVEL OTTHUMG00000186963.1 745 628 2 ENSG00000221385.1 AL354984.2 chr20 58067456 58067607 + miRNA NOVEL NA 152 152 1 ENSG00000225708.5 RP13-379L11.1 chr20 58069054 58072070 - lincRNA NOVEL OTTHUMG00000032833.3 3017 1024 4 ENSG00000270411.1 RP13-379L11.3 chr20 58097267 58097591 + processed_pseudogene KNOWN OTTHUMG00000184888.1 325 325 1 ENSG00000271947.1 RP11-439M11.1 chr2 6905724 6906301 - lincRNA NOVEL OTTHUMG00000185542.1 578 578 1 ENSG00000124237.5 C20orf85 chr20 58150904 58161150 + protein_coding KNOWN OTTHUMG00000032836.2 10247 803 4 ENSG00000124227.5 ANKRD60 chr20 58218495 58228653 - protein_coding KNOWN OTTHUMG00000032837.5 10159 1038 4 ENSG00000124224.15 PPP4R1L chr20 58228940 58309439 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000032838.11 80500 9251 76 ENSG00000124209.3 RAB22A chr20 58309696 58367507 + protein_coding KNOWN OTTHUMG00000032844.2 57812 9285 11 ENSG00000124164.14 VAPB chr20 58389122 58451101 + protein_coding KNOWN OTTHUMG00000032840.3 61980 10585 27 ENSG00000198768.9 APCDD1L chr20 58459101 58515131 - protein_coding KNOWN OTTHUMG00000032845.3 56031 3942 10 ENSG00000231290.4 APCDD1L-AS1 chr20 58515379 58619888 + processed_transcript NOVEL OTTHUMG00000032847.2 104510 4940 34 ENSG00000254620.1 RP5-907D15.3 chr20 58594417 58603973 + lincRNA NOVEL OTTHUMG00000167401.1 9557 507 2 ENSG00000221174.1 AL050327.1 chr20 58605084 58605227 + miRNA NOVEL NA 144 144 1 ENSG00000268941.2 RP5-907D15.4 chr20 58634772 58635738 + lincRNA NOVEL OTTHUMG00000187341.1 967 967 1 ENSG00000228203.5 RNF144A-AS1 chr2 6912277 6918709 - processed_transcript NOVEL OTTHUMG00000151701.3 6433 4648 14 ENSG00000124222.20 STX16 chr20 58651253 58679526 + protein_coding KNOWN OTTHUMG00000033084.7 28274 5099 160 ENSG00000254995.4 STX16-NPEPL1 chr20 58651434 58715410 + protein_coding KNOWN OTTHUMG00000167390.1 63977 3859 25 ENSG00000215440.10 NPEPL1 chr20 58689131 58719238 + protein_coding KNOWN OTTHUMG00000033060.7 30108 7641 72 ENSG00000254419.1 RP11-261P9.4 chr20 58710795 58711633 + sense_intronic NOVEL OTTHUMG00000167377.1 839 577 2 ENSG00000237121.1 PIEZO1P2 chr20 58740532 58783821 - unprocessed_pseudogene KNOWN OTTHUMG00000032850.1 43290 2180 14 ENSG00000270279.1 RP4-806M20.5 chr20 58754351 58756838 + lincRNA NOVEL OTTHUMG00000185294.1 2488 1619 3 ENSG00000268649.3 RP4-806M20.4 chr20 58817132 58817725 - lincRNA NOVEL OTTHUMG00000183175.1 594 594 1 ENSG00000276373.1 MIR296 chr20 58817615 58817694 - miRNA KNOWN NA 80 80 1 ENSG00000216031.1 MIR298 chr20 58818226 58818313 - miRNA KNOWN NA 88 88 1 ENSG00000235590.6 GNAS-AS1 chr20 58818919 58850903 - antisense KNOWN OTTHUMG00000060481.5 31985 3657 14 ENSG00000151692.13 RNF144A chr2 6917392 7068286 + protein_coding KNOWN OTTHUMG00000090353.6 150895 6473 37 ENSG00000268333.1 RP4-806M20.3 chr20 58833809 58836529 - lincRNA NOVEL OTTHUMG00000183176.1 2721 1153 2 ENSG00000087460.22 GNAS chr20 58839718 58911192 + protein_coding KNOWN OTTHUMG00000033069.19 71475 13320 427 ENSG00000276859.1 GNAS-AS1_1 chr20 58842030 58842132 + misc_RNA NOVEL NA 103 103 1 ENSG00000276722.1 GNAS-AS1_2 chr20 58842433 58842546 + misc_RNA NOVEL NA 114 114 1 ENSG00000274491.1 GNAS-AS1_4 chr20 58850530 58850641 + misc_RNA NOVEL NA 112 112 1 ENSG00000275069.1 GNAS-AS1_5 chr20 58850783 58850903 + misc_RNA NOVEL NA 121 121 1 ENSG00000225806.6 RP1-309F20.3 chr20 58863528 58888809 - antisense NOVEL OTTHUMG00000137369.3 25282 1521 10 ENSG00000270951.1 RP1-309F20.4 chr20 58876592 58876981 - antisense NOVEL OTTHUMG00000185295.1 390 390 1 ENSG00000101158.11 NELFCD chr20 58981208 58995133 + protein_coding KNOWN OTTHUMG00000032861.5 13926 6298 107 ENSG00000101160.12 CTSZ chr20 58995185 59007247 - protein_coding KNOWN OTTHUMG00000032858.2 12063 2038 16 ENSG00000223884.4 AC019048.1 chr2 7062727 7077880 - antisense NOVEL OTTHUMG00000151660.1 15154 743 6 ENSG00000101162.3 TUBB1 chr20 59019254 59026654 + protein_coding KNOWN OTTHUMG00000032860.1 7401 3496 4 ENSG00000124172.8 ATP5E chr20 59025467 59032382 - protein_coding KNOWN OTTHUMG00000032854.3 6916 5126 8 ENSG00000101166.14 SLMO2 chr20 59033145 59042909 - protein_coding KNOWN OTTHUMG00000032856.3 9765 2977 19 ENSG00000232925.2 MRPS16P2 chr20 59113224 59113631 + processed_pseudogene KNOWN OTTHUMG00000032863.1 408 408 1 ENSG00000274961.1 RP3-492J12.2 chr20 59123404 59147026 + lincRNA NOVEL OTTHUMG00000186964.1 23623 898 2 ENSG00000124203.5 ZNF831 chr20 59191020 59259113 + protein_coding KNOWN OTTHUMG00000032864.3 68094 9404 5 ENSG00000124205.14 EDN3 chr20 59300427 59325992 + protein_coding KNOWN OTTHUMG00000032867.2 25566 2675 24 ENSG00000263903.1 AL035250.1 chr20 59346379 59346480 - miRNA NOVEL NA 102 102 1 ENSG00000225129.1 RP4-614C15.2 chr20 59352195 59357774 - lincRNA NOVEL OTTHUMG00000137387.1 5580 593 2 ENSG00000230352.1 RP4-614C15.3 chr20 59360927 59364773 - lincRNA NOVEL OTTHUMG00000137385.1 3847 620 2 ENSG00000223145.1 RN7SKP112 chr2 7141227 7141544 - misc_RNA KNOWN NA 318 318 1 ENSG00000233686.3 PIEZO1P1 chr20 59460619 59460837 - processed_pseudogene KNOWN OTTHUMG00000032868.2 219 219 1 ENSG00000227282.1 RP11-164D18.2 chr20 59515191 59516039 + lincRNA NOVEL OTTHUMG00000137386.1 849 566 2 ENSG00000087495.15 PHACTR3 chr20 59577509 59847711 + protein_coding KNOWN OTTHUMG00000032869.3 270203 6095 88 ENSG00000238194.1 RP4-719C8.1 chr20 59626464 59628289 - antisense NOVEL OTTHUMG00000137388.1 1826 682 4 ENSG00000238777.1 RNU7-141P chr20 59852667 59852728 - snRNA KNOWN NA 62 62 1 ENSG00000196074.11 SYCP2 chr20 59863563 59933655 - protein_coding KNOWN OTTHUMG00000032872.3 70093 6466 156 ENSG00000196227.9 FAM217B chr20 59933764 59948680 + protein_coding KNOWN OTTHUMG00000032873.2 14917 5323 16 ENSG00000132825.6 PPP1R3D chr20 59936668 59940297 - protein_coding KNOWN OTTHUMG00000032876.2 3630 3630 1 ENSG00000124215.15 CDH26 chr20 59958427 60034011 + protein_coding KNOWN OTTHUMG00000032874.2 75585 5748 52 ENSG00000176659.7 C20orf197 chr20 60055925 60072953 + lincRNA KNOWN OTTHUMG00000032880.1 17029 2732 4 ENSG00000272002.1 RP11-557L19.1 chr2 7260871 7261504 + lincRNA NOVEL OTTHUMG00000185344.1 634 634 1 ENSG00000276093.1 RP5-1017F8.2 chr20 60083360 60083872 - lincRNA NOVEL OTTHUMG00000186966.1 513 513 1 ENSG00000228340.4 MIR646HG chr20 60087840 60527458 + lincRNA NOVEL OTTHUMG00000032883.1 439619 5137 51 ENSG00000207802.1 MIR646 chr20 60308474 60308567 + miRNA KNOWN NA 94 94 1 ENSG00000229690.1 MTCO2P1 chr20 60414396 60414872 - processed_pseudogene KNOWN OTTHUMG00000032881.1 477 477 1 ENSG00000266140.1 MIR4533 chr20 60478111 60478181 + miRNA KNOWN NA 71 71 1 ENSG00000265617.1 MIR548AG2 chr20 60564562 60564625 + miRNA KNOWN NA 64 64 1 ENSG00000276627.1 RP5-1016A21.1 chr20 60761874 60767279 + lincRNA NOVEL OTTHUMG00000186967.1 5406 459 4 ENSG00000261035.1 RP11-151E14.1 chr20 60812004 60814211 - lincRNA NOVEL OTTHUMG00000175574.1 2208 2208 1 ENSG00000229755.1 RP5-827L5.2 chr20 61077224 61077816 - lincRNA NOVEL OTTHUMG00000032885.1 593 500 2 ENSG00000229606.1 RP5-827L5.1 chr20 61079140 61080179 + lincRNA NOVEL OTTHUMG00000032884.1 1040 391 2 ENSG00000213774.3 AC010904.1 chr2 7324748 7325062 - processed_pseudogene KNOWN OTTHUMG00000151594.2 315 315 1 ENSG00000179242.14 CDH4 chr20 61252426 61940617 + protein_coding KNOWN OTTHUMG00000032890.4 688192 7351 46 ENSG00000276786.1 WI2-8325B5.1 chr20 61369879 61370855 + lincRNA NOVEL OTTHUMG00000186968.1 977 977 1 ENSG00000277270.1 RP5-827E24.1 chr20 61434625 61437547 - lincRNA NOVEL OTTHUMG00000186969.1 2923 1021 6 ENSG00000179253.3 RP11-429E11.3 chr20 61717506 61719748 - antisense NOVEL OTTHUMG00000032887.1 2243 2000 2 ENSG00000225106.1 RP11-429E11.2 chr20 61738219 61755056 - antisense NOVEL OTTHUMG00000032886.1 16838 1354 5 ENSG00000130699.15 TAF4 chr20 61953469 62065810 - protein_coding KNOWN OTTHUMG00000032893.8 112342 9808 47 ENSG00000221417.1 MIR1257 chr20 61953546 61953662 - miRNA KNOWN NA 117 117 1 ENSG00000235018.1 RP11-11M20.2 chr20 62037429 62037956 - processed_pseudogene KNOWN OTTHUMG00000032892.1 528 528 1 ENSG00000265306.1 MIR3195 chr20 62064802 62064885 + miRNA KNOWN NA 84 84 1 ENSG00000149657.18 LSM14B chr20 62122461 62135378 + protein_coding KNOWN OTTHUMG00000032901.6 12918 3381 32 ENSG00000229727.5 AC013460.1 chr2 7421261 7450254 + processed_transcript NOVEL OTTHUMG00000151593.2 28994 3239 26 ENSG00000280448.1 AL078633.1 chr20 62134680 62135089 - pseudogene NOVEL NA 410 407 2 ENSG00000101182.13 PSMA7 chr20 62136735 62143440 - protein_coding KNOWN OTTHUMG00000032895.3 6706 1750 33 ENSG00000184402.13 SS18L1 chr20 62143795 62182484 + protein_coding KNOWN OTTHUMG00000032902.4 38690 5094 34 ENSG00000101181.16 MTG2 chr20 62183029 62203568 + protein_coding KNOWN OTTHUMG00000032897.4 20540 5209 44 ENSG00000101180.14 HRH3 chr20 62214970 62220267 - protein_coding KNOWN OTTHUMG00000032899.1 5298 2671 12 ENSG00000130703.14 OSBPL2 chr20 62231922 62296213 + protein_coding KNOWN OTTHUMG00000032909.5 64292 11735 69 ENSG00000130706.11 ADRM1 chr20 62302093 62308862 + protein_coding KNOWN OTTHUMG00000032904.2 6770 2142 36 ENSG00000226332.2 RP11-157P1.4 chr20 62305432 62306325 - antisense NOVEL OTTHUMG00000032910.1 894 681 2 ENSG00000130702.12 LAMA5 chr20 62307955 62367312 - protein_coding KNOWN OTTHUMG00000032908.5 59358 14291 148 ENSG00000265329.1 MIR4758 chr20 62332487 62332557 - miRNA KNOWN NA 71 71 1 ENSG00000221255.1 RNU6ATAC37P chr2 7576841 7576971 + snRNA KNOWN NA 131 131 1 ENSG00000228812.6 LAMA5-AS1 chr20 62352995 62356480 + antisense NOVEL OTTHUMG00000032911.3 3486 843 10 ENSG00000273619.1 RP5-908M14.9 chr20 62386303 62386970 - antisense NOVEL OTTHUMG00000186988.1 668 668 1 ENSG00000171858.16 RPS21 chr20 62387116 62388520 + protein_coding KNOWN OTTHUMG00000032915.2 1405 1023 20 ENSG00000149679.10 CABLES2 chr20 62388632 62407285 - protein_coding KNOWN OTTHUMG00000032912.2 18654 3785 17 ENSG00000275437.1 RP5-908M14.10 chr20 62402236 62405935 - sense_intronic NOVEL OTTHUMG00000186989.1 3700 3700 1 ENSG00000130701.3 RBBP8NL chr20 62410237 62427533 - protein_coding KNOWN OTTHUMG00000032913.1 17297 2793 14 ENSG00000233017.2 RP5-908M14.5 chr20 62427827 62447621 + antisense NOVEL OTTHUMG00000032918.3 19795 1386 10 ENSG00000130700.6 GATA5 chr20 62463497 62475970 - protein_coding KNOWN OTTHUMG00000032919.2 12474 2595 7 ENSG00000272050.1 RP13-379O24.3 chr20 62477870 62478594 + lincRNA NOVEL OTTHUMG00000185378.1 725 725 1 ENSG00000260542.1 RP13-379O24.2 chr20 62513909 62516096 - lincRNA NOVEL OTTHUMG00000175628.1 2188 2188 1 ENSG00000240618.1 RP11-206L10.5 chr1 759032 764925 - lincRNA NOVEL OTTHUMG00000002409.1 5894 295 2 ENSG00000281598.1 AL358794.1 chr1 16408508 16408583 + miRNA NOVEL NA 76 76 1 ENSG00000230515.1 AC092580.3 chr2 7671604 7672246 - lincRNA NOVEL OTTHUMG00000151592.1 643 469 2 ENSG00000174403.14 C20orf166-AS1 chr20 62544343 62551526 - antisense KNOWN OTTHUMG00000048002.2 7184 3397 17 ENSG00000174407.10 MIR1-1HG chr20 62550453 62570764 + antisense KNOWN OTTHUMG00000048000.1 20312 1220 6 ENSG00000199017.1 MIR1-1 chr20 62554303 62554379 + miRNA KNOWN NA 77 77 1 ENSG00000207764.1 MIR133A2 chr20 62564912 62565013 + miRNA KNOWN NA 102 102 1 ENSG00000226094.1 RPL7P3 chr20 62572671 62573384 + processed_pseudogene KNOWN OTTHUMG00000048001.1 714 714 1 ENSG00000264490.3 WI2-87327B8.1 chr20 62575590 62577507 + lincRNA NOVEL OTTHUMG00000179711.1 1918 1918 1 ENSG00000273812.1 WI2-87327B8.2 chr20 62596732 62603115 - lincRNA NOVEL OTTHUMG00000186990.1 6384 625 2 ENSG00000232121.1 RP13-30A9.1 chr20 62633681 62635504 - antisense NOVEL OTTHUMG00000032921.1 1824 499 4 ENSG00000229882.1 RP13-30A9.2 chr20 62633772 62635862 + antisense NOVEL OTTHUMG00000032922.1 2091 461 2 ENSG00000167046.4 RP11-93B14.6 chr20 62640719 62643304 - antisense NOVEL OTTHUMG00000032926.1 2586 1933 2 ENSG00000235576.1 AC092580.4 chr2 7725801 7730705 + lincRNA NOVEL OTTHUMG00000151591.1 4905 243 2 ENSG00000101187.14 SLCO4A1 chr20 62642445 62685785 + protein_coding KNOWN OTTHUMG00000032923.3 43341 4051 60 ENSG00000277496.1 RP11-93B14.9 chr20 62648961 62650767 - antisense NOVEL OTTHUMG00000186991.1 1807 1807 1 ENSG00000276317.1 RP11-93B14.10 chr20 62651272 62652186 - antisense NOVEL OTTHUMG00000186999.1 915 614 2 ENSG00000232803.1 SLCO4A1-AS1 chr20 62663019 62666724 - antisense NOVEL OTTHUMG00000032925.1 3706 1534 8 ENSG00000237687.2 LINC00686 chr20 62695024 62700480 - lincRNA NOVEL OTTHUMG00000032927.1 5457 332 2 ENSG00000101188.4 NTSR1 chr20 62708837 62762771 + protein_coding KNOWN OTTHUMG00000032932.1 53935 4237 7 ENSG00000223669.1 RP11-93B14.4 chr20 62732566 62735347 - antisense NOVEL OTTHUMG00000032924.1 2782 739 2 ENSG00000228705.1 LINC00659 chr20 62774128 62775412 - antisense NOVEL OTTHUMG00000032931.1 1285 540 2 ENSG00000101189.6 MRGBP chr20 62796453 62801738 + protein_coding KNOWN OTTHUMG00000032940.2 5286 2781 5 ENSG00000229873.1 OGFR-AS1 chr20 62800627 62805587 - antisense NOVEL OTTHUMG00000032933.1 4961 668 3 ENSG00000232979.1 AC092580.2 chr2 7735645 7735783 - processed_pseudogene KNOWN OTTHUMG00000151597.1 139 139 1 ENSG00000060491.15 OGFR chr20 62804835 62814000 + protein_coding KNOWN OTTHUMG00000032937.2 9166 4702 29 ENSG00000092758.14 COL9A3 chr20 62816244 62841159 + protein_coding KNOWN OTTHUMG00000032938.4 24916 4831 119 ENSG00000101190.11 TCFL5 chr20 62841115 62861763 - protein_coding KNOWN OTTHUMG00000032939.2 20649 3436 12 ENSG00000233838.5 DPH3P1 chr20 62845664 62845912 + processed_pseudogene KNOWN OTTHUMG00000032941.2 249 249 1 ENSG00000236527.1 ARF4P2 chr20 62872250 62873076 - processed_pseudogene KNOWN OTTHUMG00000032934.1 827 526 2 ENSG00000101191.15 DIDO1 chr20 62877738 62937952 - protein_coding KNOWN OTTHUMG00000032945.3 60215 13281 71 ENSG00000273759.1 RP4-563E14.1 chr20 62928621 62929297 - lincRNA NOVEL OTTHUMG00000187000.1 677 677 1 ENSG00000101193.7 GID8 chr20 62938119 62948475 + protein_coding KNOWN OTTHUMG00000032949.3 10357 4622 7 ENSG00000101194.16 SLC17A9 chr20 62952647 62969585 + protein_coding KNOWN OTTHUMG00000032951.8 16939 5521 58 ENSG00000125533.5 BHLHE23 chr20 63005927 63007035 - protein_coding KNOWN OTTHUMG00000032948.3 1109 1109 2 ENSG00000229405.1 AC092580.1 chr2 7736438 7737095 - processed_pseudogene KNOWN OTTHUMG00000151588.1 658 658 1 ENSG00000272259.4 RP11-305P22.9 chr20 63009383 63085071 + lincRNA NOVEL OTTHUMG00000185413.1 75689 3936 6 ENSG00000125514.8 LINC00029 chr20 63034217 63037028 - lincRNA KNOWN OTTHUMG00000032950.2 2812 1790 9 ENSG00000237119.1 LINC01056 chr20 63038011 63053863 + lincRNA NOVEL OTTHUMG00000032954.1 15853 1234 6 ENSG00000231133.5 HAR1B chr20 63095493 63102319 - lincRNA KNOWN OTTHUMG00000140135.2 6827 896 5 ENSG00000274915.1 HAR1A chr20 63102142 63102259 + misc_RNA NOVEL NA 118 118 1 ENSG00000225978.3 HAR1A chr20 63102205 63104386 + lincRNA KNOWN OTTHUMG00000140136.1 2182 1882 2 ENSG00000260416.1 RP5-963E22.5 chr20 63127495 63129459 - lincRNA NOVEL OTTHUMG00000175621.1 1965 1965 1 ENSG00000231977.1 RP5-963E22.4 chr20 63166797 63180903 - lincRNA NOVEL OTTHUMG00000140137.1 14107 542 2 ENSG00000207598.1 MIR124-3 chr20 63178500 63178586 + miRNA KNOWN NA 87 87 1 ENSG00000149658.16 YTHDF1 chr20 63195429 63216234 - protein_coding KNOWN OTTHUMG00000032955.3 20806 3301 9 ENSG00000226506.4 AC007463.2 chr2 7886770 7899655 - lincRNA NOVEL OTTHUMG00000151589.1 12886 796 9 ENSG00000273821.1 RP5-963E22.6 chr20 63218041 63218502 + lincRNA NOVEL OTTHUMG00000187004.1 462 462 1 ENSG00000101197.11 BIRC7 chr20 63235883 63240507 + protein_coding KNOWN OTTHUMG00000032957.2 4625 1562 18 ENSG00000266463.1 MIR3196 chr20 63238779 63238842 + miRNA KNOWN NA 64 64 1 ENSG00000101198.13 NKAIN4 chr20 63240784 63272694 - protein_coding KNOWN OTTHUMG00000032959.3 31911 2668 45 ENSG00000275620.1 FLJ16779 chr20 63253978 63261615 + antisense NOVEL OTTHUMG00000187005.1 7638 7638 1 ENSG00000101199.11 ARFGAP1 chr20 63272785 63289793 + protein_coding KNOWN OTTHUMG00000032965.6 17009 6613 182 ENSG00000266104.1 MIR4326 chr20 63286808 63286866 + miRNA KNOWN NA 59 59 1 ENSG00000101203.15 COL20A1 chr20 63293186 63334851 + protein_coding KNOWN OTTHUMG00000032964.17 41666 10974 146 ENSG00000222439.1 RNU6-994P chr20 63337339 63337449 + snRNA KNOWN NA 111 111 1 ENSG00000101204.14 CHRNA4 chr20 63343223 63378401 - protein_coding KNOWN OTTHUMG00000033080.6 35179 10650 54 ENSG00000235665.4 LINC00298 chr2 7922425 8278084 - lincRNA NOVEL OTTHUMG00000151595.1 355660 2610 8 ENSG00000203900.2 RP11-261N11.8 chr20 63359988 63371177 + antisense NOVEL OTTHUMG00000032958.2 11190 3410 8 ENSG00000075043.16 KCNQ2 chr20 63400210 63472677 - protein_coding KNOWN OTTHUMG00000033049.13 72468 11355 197 ENSG00000280936.1 RP11-358D14.3 chr20 63422269 63424555 + antisense NOVEL OTTHUMG00000189592.1 2287 519 3 ENSG00000226390.1 RP11-358D14.2 chr20 63448051 63449329 + antisense NOVEL OTTHUMG00000032967.1 1279 789 2 ENSG00000101210.9 EEF1A2 chr20 63488013 63499315 - protein_coding KNOWN OTTHUMG00000033076.1 11303 2006 15 ENSG00000230226.1 RP4-697K14.3 chr20 63502287 63505111 + antisense NOVEL OTTHUMG00000032968.1 2825 376 2 ENSG00000125534.8 PPDPF chr20 63520724 63522206 + protein_coding KNOWN OTTHUMG00000032978.1 1483 1094 12 ENSG00000101213.6 PTK6 chr20 63528001 63537370 - protein_coding KNOWN OTTHUMG00000033039.2 9370 2947 15 ENSG00000125508.3 SRMS chr20 63540810 63547504 - protein_coding KNOWN OTTHUMG00000032977.1 6695 1516 8 ENSG00000275812.1 RP4-697K14.15 chr20 63543411 63543738 + antisense NOVEL OTTHUMG00000187022.1 328 328 1 ENSG00000236790.4 LINC00299 chr2 8007771 8383621 - lincRNA KNOWN OTTHUMG00000112455.5 375851 4418 26 ENSG00000125531.6 C20orf195 chr20 63547891 63556708 + protein_coding KNOWN OTTHUMG00000032980.3 8818 3625 7 ENSG00000130589.15 HELZ2 chr20 63558086 63574239 - protein_coding KNOWN OTTHUMG00000032969.3 16154 12066 48 ENSG00000101216.9 GMEB2 chr20 63587602 63627041 - protein_coding KNOWN OTTHUMG00000032988.1 39440 4707 27 ENSG00000232442.1 CTD-3184A7.4 chr20 63627227 63628824 + antisense NOVEL OTTHUMG00000032983.1 1598 801 4 ENSG00000197457.8 STMN3 chr20 63639705 63653427 - protein_coding KNOWN OTTHUMG00000032985.1 13723 2452 10 ENSG00000258366.6 RTEL1 chr20 63657810 63696253 + protein_coding KNOWN OTTHUMG00000032992.6 38444 5995 192 ENSG00000026036.19 RTEL1-TNFRSF6B chr20 63659300 63698698 + protein_coding KNOWN OTTHUMG00000170363.1 39399 8752 143 ENSG00000243509.4 TNFRSF6B chr20 63696668 63698684 + protein_coding KNOWN OTTHUMG00000143724.1 2017 1124 3 ENSG00000101246.18 ARFRP1 chr20 63698642 63708025 - protein_coding KNOWN OTTHUMG00000032993.7 9384 7627 75 ENSG00000197114.10 ZGPAT chr20 63707465 63736142 + protein_coding KNOWN OTTHUMG00000032998.5 28678 3335 56 ENSG00000229740.1 U91324.1 chr2 8139402 8143269 + lincRNA NOVEL OTTHUMG00000151596.1 3868 447 2 ENSG00000273154.2 RP4-583P15.15 chr20 63708864 63739103 + protein_coding NOVEL OTTHUMG00000186489.2 30240 3154 15 ENSG00000274501.1 RP4-583P15.16 chr20 63730072 63730377 - antisense NOVEL OTTHUMG00000187024.1 306 306 1 ENSG00000203896.8 LIME1 chr20 63736283 63739103 + protein_coding KNOWN OTTHUMG00000032999.4 2821 2550 43 ENSG00000273047.1 RP4-583P15.14 chr20 63738270 63740398 + protein_coding NOVEL OTTHUMG00000186435.1 2129 586 5 ENSG00000125520.12 SLC2A4RG chr20 63739861 63743505 + protein_coding KNOWN OTTHUMG00000032997.3 3645 2244 33 ENSG00000130584.9 ZBTB46 chr20 63743666 63831244 - protein_coding KNOWN OTTHUMG00000033001.2 87579 6084 20 ENSG00000229299.2 RP4-583P15.10 chr20 63744689 63745958 + antisense NOVEL OTTHUMG00000032989.2 1270 471 4 ENSG00000231208.4 ZBTB46-AS1 chr20 63808076 63816521 + antisense NOVEL OTTHUMG00000032990.1 8446 533 3 ENSG00000279610.1 C20orf181 chr20 63843436 63843915 - TEC KNOWN OTTHUMG00000033002.1 480 480 1 ENSG00000268858.2 RP4-591C20.9 chr20 63861212 63864293 - antisense NOVEL OTTHUMG00000187033.1 3082 3082 1 ENSG00000231435.1 AC011747.3 chr2 8543592 8575501 - lincRNA NOVEL OTTHUMG00000151623.1 31910 1036 3 ENSG00000183260.6 ABHD16B chr20 63861213 63863306 + protein_coding KNOWN OTTHUMG00000033010.1 2094 2094 1 ENSG00000101150.16 TPD52L2 chr20 63865228 63891545 + protein_coding KNOWN OTTHUMG00000033009.2 26318 4694 64 ENSG00000101152.9 DNAJC5 chr20 63895182 63936031 + protein_coding KNOWN OTTHUMG00000033007.3 40850 5287 11 ENSG00000199805.1 RNU1-134P chr20 63908955 63909119 + snRNA KNOWN NA 165 165 1 ENSG00000274555.1 AL118506.2 chr20 63919393 63919464 + miRNA NOVEL NA 72 72 1 ENSG00000216141.3 MIR941-2 chr20 63919505 63919576 + miRNA KNOWN NA 72 72 1 ENSG00000274277.1 AL118506.1 chr20 63919617 63919688 + miRNA NOVEL NA 72 72 1 ENSG00000216195.3 MIR941-4 chr20 63919756 63919827 + miRNA KNOWN NA 72 72 1 ENSG00000275842.1 MIR941-5 chr20 63919868 63919939 + miRNA KNOWN NA 72 72 1 ENSG00000215946.3 MIR941-1 chr20 63920036 63920107 + miRNA KNOWN NA 72 72 1 ENSG00000236008.1 AC011747.4 chr2 8559833 8583792 - lincRNA NOVEL OTTHUMG00000151622.2 23960 8956 8 ENSG00000198276.12 UCKL1 chr20 63939829 63956415 - protein_coding KNOWN OTTHUMG00000033003.5 16587 3108 54 ENSG00000272045.1 MIR1914 chr20 63941465 63941544 - miRNA KNOWN NA 80 80 1 ENSG00000207554.1 MIR647 chr20 63942631 63942726 - miRNA KNOWN NA 96 96 1 ENSG00000280213.1 UCKL1-AS1 chr20 63953384 63956985 + antisense KNOWN OTTHUMG00000187354.1 3602 3602 1 ENSG00000196700.6 ZNF512B chr20 63956702 64048758 - protein_coding KNOWN OTTHUMG00000033008.1 92057 6022 51 ENSG00000130590.12 SAMD10 chr20 63974113 63980008 - protein_coding KNOWN OTTHUMG00000033011.1 5896 2453 19 ENSG00000101161.7 PRPF6 chr20 63981135 64033100 + protein_coding KNOWN OTTHUMG00000033018.1 51966 3044 21 ENSG00000196421.6 LINC00176 chr20 64034344 64039962 + lincRNA KNOWN OTTHUMG00000033015.2 5619 5480 11 ENSG00000203883.6 SOX18 chr20 64047582 64049641 - protein_coding KNOWN OTTHUMG00000033017.2 2060 1864 2 ENSG00000171703.15 TCEA2 chr20 64049836 64072347 + protein_coding KNOWN OTTHUMG00000033026.3 22512 4802 101 ENSG00000157191.18 NECAP2 chr1 16440672 16460078 + protein_coding KNOWN OTTHUMG00000002313.4 19407 5559 75 ENSG00000231083.1 AC011747.6 chr2 8600892 8622942 - lincRNA NOVEL OTTHUMG00000151627.1 22051 565 3 ENSG00000237371.1 RP13-152O15.5 chr20 64056803 64057084 + antisense NOVEL OTTHUMG00000033016.1 282 188 2 ENSG00000171700.12 RGS19 chr20 64073181 64079988 - protein_coding KNOWN OTTHUMG00000033024.2 6808 2028 18 ENSG00000274034.1 MIR6813 chr20 64076955 64077010 - miRNA KNOWN NA 56 56 1 ENSG00000125510.14 OPRL1 chr20 64080173 64100643 + protein_coding KNOWN OTTHUMG00000033027.1 20471 3549 15 ENSG00000171695.9 LKAAEAR1 chr20 64083380 64084359 - protein_coding KNOWN OTTHUMG00000033021.2 980 868 5 ENSG00000125522.3 NPBWR2 chr20 64105820 64107171 - protein_coding KNOWN OTTHUMG00000033032.1 1352 1352 1 ENSG00000196132.10 MYT1 chr20 64151791 64242253 + protein_coding KNOWN OTTHUMG00000149988.3 90463 6265 81 ENSG00000203880.10 PCMTD2 chr20 64255695 64287821 + protein_coding KNOWN OTTHUMG00000033029.3 32127 5997 40 ENSG00000278171.1 RP11-476I15.5 chr20 64278306 64278561 + processed_pseudogene KNOWN OTTHUMG00000187990.1 256 256 1 ENSG00000232852.1 CICP4 chr20 64290187 64292998 - processed_pseudogene KNOWN OTTHUMG00000033035.1 2812 2812 1 ENSG00000225642.1 SNRPEP5 chr2 8603082 8603359 + processed_pseudogene KNOWN OTTHUMG00000151628.1 278 278 1 ENSG00000149656.7 LINC00266-1 chr20 64290385 64313132 + lincRNA KNOWN OTTHUMG00000033036.2 22748 1438 9 ENSG00000274727.1 RP11-476I15.6 chr20 64327418 64327972 - processed_pseudogene KNOWN OTTHUMG00000187993.1 555 555 1 ENSG00000279493.1 CH507-9B2.2 chr21 5011799 5017145 + protein_coding KNOWN OTTHUMG00000189354.1 5347 513 4 ENSG00000277117.3 ICOSLG chr21 5022493 5040666 + protein_coding KNOWN OTTHUMG00000189355.1 18174 3357 33 ENSG00000279687.1 CH507-9B2.8 chr21 5073458 5087867 + antisense NOVEL OTTHUMG00000189356.1 14410 479 2 ENSG00000280071.2 CH507-9B2.3 chr21 5079294 5128425 - protein_coding KNOWN OTTHUMG00000189357.1 49132 3106 55 ENSG00000276612.2 CH507-9B2.4 chr21 5116343 5133805 - protein_coding KNOWN OTTHUMG00000189358.1 17463 1599 7 ENSG00000275464.2 CH507-9B2.5 chr21 5130871 5154734 - protein_coding KNOWN OTTHUMG00000189361.1 23864 6801 29 ENSG00000280433.1 CH507-9B2.9 chr21 5155499 5165472 - protein_coding KNOWN OTTHUMG00000189362.1 9974 5411 6 ENSG00000279669.1 RP11-717F1.1 chr21 5232668 5243833 - lincRNA NOVEL OTTHUMG00000189363.1 11166 388 2 ENSG00000235092.4 ID2-AS1 chr2 8666636 8681863 - antisense NOVEL OTTHUMG00000151625.1 15228 2060 21 ENSG00000279094.2 CH507-24F1.1 chr21 5499151 5502542 - lincRNA NOVEL OTTHUMG00000189365.2 3392 1125 8 ENSG00000274333.3 RP11-717F1.2 chr21 5553637 5614880 + lincRNA NOVEL OTTHUMG00000189364.2 61244 8756 40 ENSG00000277777.1 Y_RNA chr21 5597390 5597490 + misc_RNA NOVEL NA 101 101 1 ENSG00000279186.1 CH507-39O4.3 chr21 5703182 5705637 - TEC KNOWN OTTHUMG00000189486.1 2456 2456 1 ENSG00000279784.1 CH507-39O4.1 chr21 5705345 5707160 + lincRNA NOVEL OTTHUMG00000189385.1 1816 307 2 ENSG00000279064.1 CH507-39O4.2 chr21 5707004 5709456 - lincRNA NOVEL OTTHUMG00000189386.1 2453 457 2 ENSG00000274559.2 CH507-42P11.1 chr21 5972956 5973333 - processed_pseudogene KNOWN OTTHUMG00000189387.1 378 378 1 ENSG00000280013.1 CH507-42P11.2 chr21 6008604 6008810 + processed_pseudogene KNOWN OTTHUMG00000189388.1 207 207 1 ENSG00000279769.1 CH507-42P11.3 chr21 6034690 6036093 + TEC KNOWN OTTHUMG00000189389.1 1404 1404 1 ENSG00000280191.2 CH507-42P11.5 chr21 6060340 6076305 + lincRNA NOVEL OTTHUMG00000189391.1 15966 1681 15 ENSG00000115738.8 ID2 chr2 8678845 8684453 + protein_coding KNOWN OTTHUMG00000112454.3 5609 2205 12 ENSG00000280095.1 CH507-42P11.7 chr21 6081193 6082585 + lincRNA NOVEL OTTHUMG00000189392.1 1393 476 2 ENSG00000280179.1 CH507-42P11.6 chr21 6084364 6091407 - lincRNA NOVEL OTTHUMG00000189393.1 7044 3973 7 ENSG00000275993.2 CH507-42P11.8 chr21 6111134 6123739 + protein_coding KNOWN OTTHUMG00000189394.1 12606 4806 17 ENSG00000274790.1 Y_RNA chr21 6223480 6223580 - misc_RNA NOVEL NA 101 101 1 ENSG00000275496.3 CH507-24F1.2 chr21 6228966 6267317 - lincRNA NOVEL OTTHUMG00000189367.2 38352 2878 21 ENSG00000280019.1 CH507-145C22.2 chr21 6272135 6276532 - unprocessed_pseudogene KNOWN OTTHUMG00000189465.1 4398 1023 10 ENSG00000279709.1 CH507-254M2.4 chr21 6309161 6312948 + unprocessed_pseudogene KNOWN OTTHUMG00000189487.1 3788 741 6 ENSG00000278903.2 CH507-145C22.1 chr21 6318434 6360415 + lincRNA NOVEL OTTHUMG00000189376.2 41982 3405 18 ENSG00000276902.1 Y_RNA chr21 6365955 6366055 + misc_RNA NOVEL NA 101 101 1 ENSG00000278014.1 FP236240.2 chr21 6441320 6441419 - miRNA NOVEL NA 100 100 1 ENSG00000260837.1 RP11-434B12.1 chr2 8721134 8722686 - lincRNA NOVEL OTTHUMG00000175715.1 1553 1553 1 ENSG00000274276.3 CBS chr21 6444869 6468040 - protein_coding KNOWN OTTHUMG00000189375.2 23172 4004 120 ENSG00000275895.3 U2AF1 chr21 6484623 6499261 - protein_coding KNOWN OTTHUMG00000189373.2 14639 5603 39 ENSG00000280346.1 CH507-152C13.4 chr21 6507017 6507389 - processed_pseudogene KNOWN OTTHUMG00000189466.1 373 373 1 ENSG00000277798.1 FP236240.1 chr21 6519205 6519304 + miRNA NOVEL NA 100 100 1 ENSG00000279226.1 CH507-152C13.5 chr21 6520344 6520670 - TEC KNOWN OTTHUMG00000189467.1 327 327 1 ENSG00000278927.1 CH507-152C13.6 chr21 6550749 6553955 - lincRNA NOVEL OTTHUMG00000189468.1 3207 1052 3 ENSG00000276076.3 CRYAA chr21 6560714 6564489 + protein_coding KNOWN OTTHUMG00000189395.1 3776 1660 11 ENSG00000280145.2 CH507-154B10.1 chr21 6630182 6670695 - lincRNA NOVEL OTTHUMG00000189396.1 40514 7492 25 ENSG00000278878.1 CH507-145C22.3 chr21 6667304 6670667 - lincRNA NOVEL OTTHUMG00000189469.1 3364 1097 5 ENSG00000279788.1 CH507-154B10.3 chr21 6676178 6679962 - unprocessed_pseudogene KNOWN OTTHUMG00000189488.1 3785 1031 9 ENSG00000134313.13 KIDINS220 chr2 8725278 8837630 - protein_coding KNOWN OTTHUMG00000151658.2 112353 11082 180 ENSG00000279728.1 CH507-236L23.5 chr21 6712596 6716361 + unprocessed_pseudogene KNOWN OTTHUMG00000189493.1 3766 818 8 ENSG00000280164.1 CH507-254M2.3 chr21 6721812 6725209 + lincRNA NOVEL OTTHUMG00000189369.1 3398 1032 3 ENSG00000279998.1 CH507-210P18.1 chr21 6789592 6812297 + lincRNA NOVEL OTTHUMG00000189397.1 22706 1612 3 ENSG00000278955.1 CH507-210P18.4 chr21 6858539 6897263 + lincRNA NOVEL OTTHUMG00000189398.1 38725 553 3 ENSG00000275507.1 MIR8069-2 chr21 6859171 6859256 + miRNA KNOWN NA 86 86 1 ENSG00000280172.1 CH507-210P18.3 chr21 6897291 6899280 + processed_pseudogene KNOWN OTTHUMG00000189399.1 1990 1990 1 ENSG00000279751.1 CH507-210P18.5 chr21 6904884 6906692 + lincRNA NOVEL OTTHUMG00000189402.1 1809 458 2 ENSG00000280018.2 CH507-154B10.2 chr21 6986450 6997765 - lincRNA NOVEL OTTHUMG00000189403.1 11316 1788 11 ENSG00000279313.1 CH507-145C22.4 chr21 6994374 6997737 - lincRNA NOVEL OTTHUMG00000189470.1 3364 897 3 ENSG00000279477.1 CH507-236L23.4 chr21 7003248 7007022 - unprocessed_pseudogene KNOWN OTTHUMG00000189489.2 3775 924 9 ENSG00000143797.10 MBOAT2 chr2 8852690 9003813 - protein_coding KNOWN OTTHUMG00000090363.3 151124 8798 65 ENSG00000278884.1 CH507-236L23.1 chr21 7020599 7025166 + lincRNA NOVEL OTTHUMG00000189404.1 4568 593 2 ENSG00000277067.3 CH507-254M2.1 chr21 7048891 7087229 + lincRNA NOVEL OTTHUMG00000189370.1 38339 3058 19 ENSG00000274046.1 Y_RNA chr21 7092616 7092716 + misc_RNA NOVEL NA 101 101 1 ENSG00000280330.1 CH507-236L23.2 chr21 7129103 7130287 + processed_pseudogene KNOWN OTTHUMG00000189471.1 1185 1185 1 ENSG00000279303.1 CH507-236L23.3 chr21 7135334 7137789 - TEC KNOWN OTTHUMG00000189472.1 2456 2456 1 ENSG00000279647.1 CH507-254M2.5 chr21 7385058 7388799 - unprocessed_pseudogene KNOWN OTTHUMG00000189490.1 3742 879 9 ENSG00000279895.1 CH507-254M2.6 chr21 7421442 7425839 - unprocessed_pseudogene KNOWN OTTHUMG00000189494.1 4398 1029 10 ENSG00000276077.3 CH507-254M2.2 chr21 7430659 7469007 + lincRNA NOVEL OTTHUMG00000189371.1 38349 3387 23 ENSG00000274484.1 Y_RNA chr21 7474394 7474494 + misc_RNA NOVEL NA 101 101 1 ENSG00000279177.1 CH507-338C24.2 chr21 7626344 7627528 - processed_pseudogene KNOWN OTTHUMG00000189473.1 1185 1185 1 ENSG00000230886.3 HMGB1P25 chr2 9018293 9018899 - processed_pseudogene KNOWN OTTHUMG00000159110.1 607 607 1 ENSG00000276546.1 Y_RNA chr21 7663911 7664011 - misc_RNA NOVEL NA 101 101 1 ENSG00000277991.3 CH507-338C24.1 chr21 7669397 7681742 - lincRNA NOVEL OTTHUMG00000189411.1 12346 7778 21 ENSG00000273590.3 SMIM11 chr21 7744962 7777853 + protein_coding KNOWN OTTHUMG00000189412.1 32892 4324 27 ENSG00000277277.2 CH507-396I9.7 chr21 7769796 7770546 - processed_pseudogene KNOWN OTTHUMG00000189500.1 751 751 1 ENSG00000278961.1 CH507-396I9.3 chr21 7788703 7793954 - lincRNA NOVEL OTTHUMG00000189413.1 5252 1050 2 ENSG00000276289.3 CH507-396I9.6 chr21 7816675 7829926 - protein_coding KNOWN OTTHUMG00000189416.1 13252 3649 11 ENSG00000273614.1 SNORA11 chr21 7826098 7826225 - snoRNA NOVEL NA 128 128 1 ENSG00000279967.1 CH507-338C24.3 chr21 8101251 8103706 - TEC KNOWN OTTHUMG00000189474.1 2456 2456 1 ENSG00000278996.1 CH507-513H4.1 chr21 8197620 8227646 + lincRNA NOVEL OTTHUMG00000189417.1 30027 2498 7 ENSG00000275279.1 FP671120.3 chr21 8201210 8201287 + miRNA NOVEL NA 78 78 1 ENSG00000223640.1 RPL30P3 chr2 9081395 9081727 - processed_pseudogene KNOWN OTTHUMG00000157021.2 333 333 1 ENSG00000275950.1 MIR6724-3 chr21 8205315 8205406 + miRNA KNOWN NA 92 92 1 ENSG00000275664.1 pRNA chr21 8205851 8205940 + misc_RNA NOVEL NA 90 90 1 ENSG00000275252.1 FP671120.2 chr21 8208012 8208125 + miRNA NOVEL NA 114 114 1 ENSG00000275708.1 MIR3648-2 chr21 8208473 8208652 + miRNA KNOWN NA 180 180 1 ENSG00000277437.1 MIR3687-2 chr21 8208844 8208904 + miRNA KNOWN NA 61 61 1 ENSG00000280800.1 CH507-513H4.6 chr21 8210384 8211306 - lincRNA NOVEL OTTHUMG00000189716.1 923 923 1 ENSG00000278233.1 RNA5-8S5 chr21 8212572 8212724 + rRNA KNOWN NA 153 153 1 ENSG00000278597.1 FP671120.7 chr21 8217953 8218001 + miRNA NOVEL NA 49 49 1 ENSG00000275530.1 FP671120.4 chr21 8218721 8218776 + miRNA NOVEL NA 56 56 1 ENSG00000274060.1 MIR6724-2 chr21 8249505 8249596 + miRNA KNOWN NA 92 92 1 ENSG00000242136.1 RP11-734K21.2 chr2 9103440 9105114 + processed_transcript NOVEL OTTHUMG00000159113.1 1675 817 5 ENSG00000277671.1 pRNA chr21 8250060 8250149 + misc_RNA NOVEL NA 90 90 1 ENSG00000276104.1 FP671120.5 chr21 8252221 8252334 + miRNA NOVEL NA 114 114 1 ENSG00000274426.1 FP671120.1 chr21 8253050 8253109 + miRNA NOVEL NA 60 60 1 ENSG00000281383.1 CH507-513H4.5 chr21 8254592 8255514 - lincRNA NOVEL OTTHUMG00000189717.1 923 923 1 ENSG00000277739.1 RNA5-8S5 chr21 8256781 8256933 + rRNA KNOWN NA 153 153 1 ENSG00000278047.1 FP671120.6 chr21 8258914 8259005 + miRNA NOVEL NA 92 92 1 ENSG00000280441.1 CH507-528H12.1 chr21 8383777 8410645 + lincRNA NOVEL OTTHUMG00000189419.1 26869 2197 6 ENSG00000274725.1 FP236383.2 chr21 8384256 8384333 + miRNA NOVEL NA 78 78 1 ENSG00000277379.1 MIR6724-3 chr21 8388362 8388453 + miRNA KNOWN NA 92 92 1 ENSG00000274868.1 pRNA chr21 8388898 8388987 + misc_RNA NOVEL NA 90 90 1 ENSG00000226029.1 RP4-798A10.2 chr1 16460948 16468481 + lincRNA NOVEL OTTHUMG00000002314.1 7534 3245 2 ENSG00000261104.1 RP11-734K21.5 chr2 9106593 9109865 + lincRNA NOVEL OTTHUMG00000175721.1 3273 3273 1 ENSG00000276796.1 FP236383.8 chr21 8391059 8391172 + miRNA NOVEL NA 114 114 1 ENSG00000276322.1 FP236383.6 chr21 8391520 8391697 + miRNA NOVEL NA 178 178 1 ENSG00000277244.1 FP236383.11 chr21 8391884 8391943 + miRNA NOVEL NA 60 60 1 ENSG00000280614.1 CH507-513H4.4 chr21 8393419 8394341 - lincRNA NOVEL OTTHUMG00000189718.1 923 923 1 ENSG00000275215.1 RNA5-8S5 chr21 8395607 8395759 + rRNA KNOWN NA 153 153 1 ENSG00000275209.1 FP236383.4 chr21 8400991 8401039 + miRNA NOVEL NA 49 49 1 ENSG00000277105.1 FP236383.10 chr21 8401760 8401816 + miRNA NOVEL NA 57 57 1 ENSG00000275692.1 MIR6724-3 chr21 8432530 8432621 + miRNA KNOWN NA 92 92 1 ENSG00000278775.1 pRNA chr21 8433085 8433174 + misc_RNA NOVEL NA 90 90 1 ENSG00000276737.1 FP236383.7 chr21 8435246 8435359 + miRNA NOVEL NA 114 114 1 ENSG00000244310.1 RP11-734K21.3 chr2 9115197 9116884 + lincRNA NOVEL OTTHUMG00000159112.1 1688 368 2 ENSG00000275783.1 FP236383.5 chr21 8435707 8435886 + miRNA NOVEL NA 180 180 1 ENSG00000274519.1 FP236383.1 chr21 8436078 8436138 + miRNA NOVEL NA 61 61 1 ENSG00000281181.1 CH507-513H4.3 chr21 8437629 8438551 - lincRNA NOVEL OTTHUMG00000189719.1 923 923 1 ENSG00000278189.1 RNA5-8S5 chr21 8439823 8439975 + rRNA KNOWN NA 153 153 1 ENSG00000276924.1 FP236383.9 chr21 8441949 8442040 + miRNA NOVEL NA 92 92 1 ENSG00000277644.1 FP236383.12 chr21 8445223 8445271 + miRNA NOVEL NA 49 49 1 ENSG00000274735.1 FP236383.3 chr21 8445991 8446046 + miRNA NOVEL NA 56 56 1 ENSG00000279990.1 bP-2168N6.2 chr21 8603547 8603984 + processed_pseudogene KNOWN OTTHUMG00000189475.1 438 438 1 ENSG00000279615.1 bP-2168N6.1 chr21 8680538 8680934 - processed_pseudogene KNOWN OTTHUMG00000189438.1 397 397 1 ENSG00000279167.1 bP-2168N6.3 chr21 8701461 8701562 + processed_pseudogene KNOWN OTTHUMG00000189476.1 102 102 1 ENSG00000240980.1 RP11-734K21.4 chr2 9143166 9146106 + lincRNA NOVEL OTTHUMG00000159111.1 2941 455 3 ENSG00000279579.2 bP-2189O9.3 chr21 8759077 8761335 + lincRNA NOVEL OTTHUMG00000189439.1 2259 845 4 ENSG00000238411.1 CR381670.1 chr21 8794358 8794439 + miRNA NOVEL NA 82 82 1 ENSG00000279213.1 bP-2189O9.4 chr21 8801362 8801880 - processed_pseudogene KNOWN OTTHUMG00000189477.1 519 519 1 ENSG00000280243.1 bP-2189O9.1 chr21 8845566 8846646 + processed_pseudogene KNOWN OTTHUMG00000189421.1 1081 1081 1 ENSG00000278931.1 bP-2189O9.2 chr21 8857260 8880976 + unprocessed_pseudogene KNOWN OTTHUMG00000189440.1 23717 1693 9 ENSG00000264462.1 MIR3648-1 chr21 8986999 8987178 + miRNA KNOWN NA 180 180 1 ENSG00000264063.1 MIR3687-1 chr21 8987370 8987430 + miRNA KNOWN NA 61 61 1 ENSG00000279501.1 bP-2171C21.3 chr21 8996496 9018670 - lincRNA NOVEL OTTHUMG00000189478.1 22175 227 2 ENSG00000279414.1 bP-2171C21.4 chr21 9026821 9027329 - processed_pseudogene KNOWN OTTHUMG00000189479.1 509 509 1 ENSG00000280436.1 bP-2171C21.2 chr21 9053122 9059060 + unprocessed_pseudogene KNOWN OTTHUMG00000189441.1 5939 510 2 ENSG00000151693.8 ASAP2 chr2 9206765 9405683 + protein_coding KNOWN OTTHUMG00000117485.2 198919 7248 66 ENSG00000188681.10 TEKT4P2 chr21 9068361 9129752 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000172149.1 61392 2309 10 ENSG00000279720.1 bP-2171C21.6 chr21 9082601 9083101 - processed_pseudogene KNOWN OTTHUMG00000189480.1 501 501 1 ENSG00000279381.1 bP-2171C21.5 chr21 9088188 9088391 + processed_pseudogene KNOWN OTTHUMG00000189481.1 204 204 1 ENSG00000239179.1 CR392039.2 chr21 9098863 9098944 - miRNA NOVEL NA 82 82 1 ENSG00000239107.1 CR392039.1 chr21 9099103 9099185 - miRNA NOVEL NA 83 83 1 ENSG00000278932.2 bP-21264C1.2 chr21 9325013 9368775 + lincRNA NOVEL OTTHUMG00000189442.1 43763 1880 20 ENSG00000279718.1 bP-21264C1.3 chr21 9364467 9365225 - processed_pseudogene KNOWN OTTHUMG00000189482.1 759 759 1 ENSG00000279208.1 bP-21264C1.1 chr21 9369285 9376645 - unprocessed_pseudogene KNOWN OTTHUMG00000189443.1 7361 768 4 ENSG00000277827.1 AC124864.1 chr21 9553503 9553572 + miRNA NOVEL NA 70 70 1 ENSG00000279864.1 RP11-570J4.1 chr21 9558970 9559155 + processed_pseudogene KNOWN OTTHUMG00000189451.1 186 186 1 ENSG00000213772.3 EIF1P7 chr2 9271292 9271628 - processed_pseudogene KNOWN OTTHUMG00000159105.1 337 337 1 ENSG00000279211.1 RP11-570J4.2 chr21 9580024 9580415 - processed_pseudogene KNOWN OTTHUMG00000189456.1 392 392 1 ENSG00000275631.1 U1 chr21 9646825 9647000 + snRNA NOVEL NA 176 176 1 ENSG00000280081.2 MGC39584 chr21 9781918 9814009 - lincRNA NOVEL OTTHUMG00000189457.2 32092 2485 14 ENSG00000280075.1 RP11-555K2.1 chr21 9810381 9810503 - processed_pseudogene KNOWN OTTHUMG00000189458.1 123 123 1 ENSG00000279783.1 RP11-555K2.2 chr21 9810501 9810848 + processed_pseudogene KNOWN OTTHUMG00000189459.1 348 348 1 ENSG00000264002.2 RN7SL52P chr21 9902344 9902627 - misc_RNA KNOWN NA 284 284 1 ENSG00000252199.1 SNORA70 chr21 9907916 9908010 + snoRNA NOVEL NA 95 95 1 ENSG00000279321.1 RP11-555K2.4 chr21 9913117 9914846 + lincRNA NOVEL OTTHUMG00000189461.1 1730 920 5 ENSG00000270533.2 bP-21201H5.1 chr21 9975017 10119309 - transcribed_processed_pseudogene KNOWN OTTHUMG00000184872.2 144293 1856 12 ENSG00000280372.1 bP-21201H5.2 chr21 10028361 10029855 - TEC KNOWN OTTHUMG00000189483.1 1495 1495 1 ENSG00000119185.11 ITGB1BP1 chr2 9403475 9423547 - protein_coding KNOWN OTTHUMG00000090414.7 20073 6678 108 ENSG00000279851.1 CH507-216K13.2 chr21 10123896 10129029 + lincRNA NOVEL OTTHUMG00000189484.1 5134 1939 2 ENSG00000279062.1 CH507-216K13.1 chr21 10136419 10137004 + unprocessed_pseudogene KNOWN OTTHUMG00000189485.1 586 586 1 ENSG00000277693.1 AP003900.6 chr21 10328411 10342737 - lincRNA NOVEL OTTHUMG00000188300.1 14327 927 6 ENSG00000275945.1 EIF3S5P1 chr21 10330732 10331537 + processed_pseudogene KNOWN OTTHUMG00000188301.1 806 806 1 ENSG00000275592.1 VN1R7P chr21 10357400 10358620 + processed_pseudogene KNOWN OTTHUMG00000188302.1 1221 903 2 ENSG00000278106.1 RP11-589M2.1 chr21 10397644 10397778 + unprocessed_pseudogene KNOWN OTTHUMG00000188251.1 135 135 1 ENSG00000187172.14 BAGE2 chr21 10413477 10516431 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000074128.5 102955 4080 28 ENSG00000277137.1 AF254983.1 chr21 10460442 10460546 + miRNA NOVEL NA 105 105 1 ENSG00000273840.1 AL078471.5 chr21 10482738 10605716 + processed_transcript NOVEL OTTHUMG00000188252.1 122979 3336 32 ENSG00000274391.3 TPTE chr21 10521553 10606140 + protein_coding KNOWN OTTHUMG00000074127.12 84588 2596 98 ENSG00000119203.12 CPSF3 chr2 9423568 9473101 + protein_coding KNOWN OTTHUMG00000090415.4 49534 3769 49 ENSG00000278678.1 AL078471.4 chr21 10576292 10576587 + processed_pseudogene KNOWN OTTHUMG00000188253.1 296 296 1 ENSG00000273872.1 AF254982.3 chr21 10612455 10613379 - unprocessed_pseudogene KNOWN OTTHUMG00000188293.1 925 289 2 ENSG00000276556.1 AF254982.2 chr21 10640028 10640338 - unprocessed_pseudogene KNOWN OTTHUMG00000188294.1 311 311 1 ENSG00000277282.1 IGHV1OR21-1 chr21 10649400 10649835 - IG_V_gene NOVEL OTTHUMG00000188295.1 436 353 2 ENSG00000229306.1 AP001464.4 chr21 12999676 13016692 - lincRNA NOVEL OTTHUMG00000074167.1 17017 323 2 ENSG00000224309.6 ANKRD30BP2 chr21 13038160 13067033 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000074164.3 28874 5110 22 ENSG00000207097.1 RNU6-614P chr21 13047583 13047689 + snRNA KNOWN NA 107 107 1 ENSG00000168122.4 ZNF355P chr21 13095305 13113790 - unprocessed_pseudogene KNOWN OTTHUMG00000074165.1 18486 3216 3 ENSG00000237202.1 AJ239321.3 chr21 13120244 13120807 + processed_pseudogene KNOWN OTTHUMG00000155589.1 564 564 1 ENSG00000280108.1 AJ239318.1 chr21 13305171 13314664 + protein_coding KNOWN NA 9494 308 2 ENSG00000134330.17 IAH1 chr2 9473658 9496543 + protein_coding KNOWN OTTHUMG00000159076.2 22886 5908 73 ENSG00000185390.2 FGF7P2 chr21 13349265 13350648 + unprocessed_pseudogene KNOWN OTTHUMG00000074196.1 1384 296 2 ENSG00000175302.5 ANKRD30BP1 chr21 13384249 13427773 - unprocessed_pseudogene KNOWN OTTHUMG00000074201.1 43525 2186 18 ENSG00000266211.1 MIR3156-3 chr21 13406384 13406460 - miRNA KNOWN NA 77 77 1 ENSG00000226930.1 GTF2IP2 chr21 13443373 13489176 - unprocessed_pseudogene KNOWN OTTHUMG00000074198.1 45804 697 6 ENSG00000219280.1 VN1R8P chr21 13476371 13477263 + processed_pseudogene KNOWN OTTHUMG00000074205.1 893 893 1 ENSG00000228184.1 SNX19P1 chr21 13525599 13528579 + processed_pseudogene KNOWN OTTHUMG00000074199.1 2981 2981 1 ENSG00000179381.7 OR4K11P chr21 13544282 13545185 - processed_pseudogene KNOWN OTTHUMG00000074202.1 904 904 1 ENSG00000228159.1 AP001465.5 chr21 13546033 13558461 + lincRNA NOVEL OTTHUMG00000074207.1 12429 504 4 ENSG00000218549.1 OR4K12P chr21 13581044 13582004 - processed_pseudogene KNOWN OTTHUMG00000074203.1 961 961 1 ENSG00000166351.9 POTED chr21 13609858 13641585 + protein_coding KNOWN OTTHUMG00000074197.1 31728 2636 19 ENSG00000151694.11 ADAM17 chr2 9488486 9555792 - protein_coding KNOWN OTTHUMG00000090425.3 67307 5491 40 ENSG00000207476.1 RNU6-286P chr21 13621577 13621683 + snRNA KNOWN NA 107 107 1 ENSG00000266299.1 MIR3118-1 chr21 13644775 13644850 - miRNA KNOWN NA 76 76 1 ENSG00000278381.1 AL050303.11 chr21 13654073 13654356 + processed_pseudogene KNOWN OTTHUMG00000187951.1 284 284 1 ENSG00000227874.1 GRAMD4P1 chr21 13665868 13667546 - processed_pseudogene KNOWN OTTHUMG00000155592.1 1679 1110 2 ENSG00000214319.2 CXADRP1 chr21 13676022 13677116 + processed_pseudogene KNOWN OTTHUMG00000074204.1 1095 1095 1 ENSG00000279773.1 AL050303.10 chr21 13679300 13681138 - TEC KNOWN OTTHUMG00000187360.1 1839 1839 1 ENSG00000273692.1 AL050303.12 chr21 13704853 13705518 + processed_pseudogene KNOWN OTTHUMG00000187952.1 666 666 1 ENSG00000278618.1 MIR8069-1 chr21 13724189 13724274 + miRNA KNOWN NA 86 86 1 ENSG00000229231.1 FEM1AP1 chr21 13762338 13764332 + processed_pseudogene KNOWN OTTHUMG00000074206.1 1995 1995 1 ENSG00000224922.1 AL050303.7 chr21 13769932 13771740 + lincRNA NOVEL OTTHUMG00000074200.1 1809 458 2 ENSG00000239300.4 RP11-400L8.2 chr2 9505445 9512412 + antisense NOVEL OTTHUMG00000159106.1 6968 491 5 ENSG00000173231.6 TERF1P1 chr21 13776086 13777266 + processed_pseudogene KNOWN OTTHUMG00000074234.1 1181 1181 1 ENSG00000232797.1 FAM207CP chr21 13792635 13793141 + processed_pseudogene KNOWN OTTHUMG00000074236.1 507 507 1 ENSG00000224860.1 GXYLT1P2 chr21 13824406 13825635 - processed_pseudogene KNOWN OTTHUMG00000074230.1 1230 1230 1 ENSG00000215562.2 CNN2P7 chr21 13826696 13827627 + processed_pseudogene KNOWN OTTHUMG00000074231.1 932 932 1 ENSG00000234538.1 ZNF114P1 chr21 13839118 13839409 + processed_pseudogene KNOWN OTTHUMG00000155503.1 292 292 1 ENSG00000228314.1 CYP4F29P chr21 13843133 13848364 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000074229.2 5232 1717 12 ENSG00000230965.1 SNX18P13 chr21 13905960 13906488 - processed_pseudogene KNOWN OTTHUMG00000155490.1 529 529 1 ENSG00000215559.7 ANKRD20A11P chr21 13909574 13980437 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000074237.2 70864 4842 59 ENSG00000203616.2 RHOT1P2 chr21 13936993 13937325 - processed_pseudogene KNOWN OTTHUMG00000155588.1 333 333 1 ENSG00000223287.1 RNU6-954P chr21 13968489 13968595 - snRNA KNOWN NA 107 107 1 ENSG00000080947.13 CROCCP3 chr1 16467436 16499257 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000037885.3 31822 6813 50 ENSG00000271855.1 RP11-214N9.1 chr2 9555899 9556775 + lincRNA NOVEL OTTHUMG00000185545.1 877 877 1 ENSG00000266838.1 AP001634.1 chr21 13985447 13985519 + miRNA NOVEL NA 73 73 1 ENSG00000183249.8 NF1P3 chr21 14000927 14005279 + unprocessed_pseudogene KNOWN OTTHUMG00000074232.1 4353 450 4 ENSG00000233442.2 PPP6R2P1 chr21 14007134 14014880 + unprocessed_pseudogene KNOWN OTTHUMG00000074233.1 7747 1275 11 ENSG00000275170.1 AP001634.6 chr21 14019060 14020725 - processed_pseudogene KNOWN OTTHUMG00000187953.1 1666 856 4 ENSG00000224905.5 AP001347.6 chr21 14027421 14144468 + antisense NOVEL OTTHUMG00000074260.1 117048 1770 9 ENSG00000249493.1 ANKRD20A18P chr21 14064325 14069087 + unprocessed_pseudogene KNOWN OTTHUMG00000074259.1 4763 492 3 ENSG00000201812.1 RNA5SP488 chr21 14070871 14070986 + rRNA KNOWN NA 116 116 1 ENSG00000277572.1 pRNA chr21 14075950 14076038 - misc_RNA NOVEL NA 89 89 1 ENSG00000188992.10 LIPI chr21 14108813 14210891 - protein_coding KNOWN OTTHUMG00000074258.3 102079 1744 33 ENSG00000240755.1 ERLEC1P1 chr21 14143581 14144158 + processed_pseudogene KNOWN OTTHUMG00000155493.1 578 578 1 ENSG00000134308.12 YWHAQ chr2 9583972 9631014 - protein_coding KNOWN OTTHUMG00000013848.5 47043 2713 22 ENSG00000185272.12 RBM11 chr21 14216130 14228372 + protein_coding KNOWN OTTHUMG00000074263.1 12243 2360 24 ENSG00000243064.7 ABCC13 chr21 14236206 14362754 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000074257.3 126549 10722 63 ENSG00000155304.5 HSPA13 chr21 14371115 14383484 - protein_coding KNOWN OTTHUMG00000074261.1 12370 4194 8 ENSG00000155307.16 SAMSN1 chr21 14485228 14583402 - protein_coding KNOWN OTTHUMG00000074317.1 98175 3169 36 ENSG00000223662.1 SAMSN1-AS1 chr21 14582202 14598303 + antisense NOVEL OTTHUMG00000074321.2 16102 840 5 ENSG00000243440.5 AF165138.7 chr21 14591930 14658821 - protein_coding NOVEL OTTHUMG00000074315.3 66892 1889 19 ENSG00000232884.6 AF127936.3 chr21 14746762 14753863 - lincRNA NOVEL OTTHUMG00000074314.4 7102 1863 6 ENSG00000228600.1 POLR2CP chr21 14757588 14758352 + processed_pseudogene KNOWN OTTHUMG00000074316.1 765 765 1 ENSG00000226751.2 AF127936.5 chr21 14761710 14763090 - lincRNA NOVEL OTTHUMG00000074319.2 1381 695 2 ENSG00000225502.2 GAPDHP16 chr21 14774301 14775262 + processed_pseudogene KNOWN OTTHUMG00000074324.2 962 962 1 ENSG00000207086.1 Y_RNA chr2 9615267 9615373 + misc_RNA NOVEL NA 107 107 1 ENSG00000235609.7 AF127936.9 chr21 14818843 15014430 - lincRNA NOVEL OTTHUMG00000189713.1 195588 5929 4 ENSG00000281903.1 AF127936.7 chr21 14819699 14918552 - lincRNA NOVEL OTTHUMG00000074322.6 98854 3635 23 ENSG00000226406.1 RBMX2P1 chr21 14829154 14829989 - processed_pseudogene KNOWN OTTHUMG00000074320.1 836 836 1 ENSG00000235277.1 AF127577.8 chr21 14918534 14947096 + antisense NOVEL OTTHUMG00000074318.1 28563 781 2 ENSG00000180530.8 NRIP1 chr21 14961235 15065000 - protein_coding KNOWN OTTHUMG00000074323.1 103766 7940 12 ENSG00000229047.1 AF127577.10 chr21 14961309 14964233 + antisense NOVEL OTTHUMG00000074325.1 2925 562 2 ENSG00000231201.1 AF127577.11 chr21 14971470 14992854 + antisense NOVEL OTTHUMG00000074330.1 21385 824 3 ENSG00000279390.1 AF127577.13 chr21 15050189 15052379 + TEC KNOWN OTTHUMG00000177446.1 2191 2191 1 ENSG00000236471.1 AF127577.12 chr21 15067070 15067837 + lincRNA NOVEL OTTHUMG00000074332.1 768 446 2 ENSG00000280082.1 AF246928.1 chr21 15346652 15346738 + TEC KNOWN OTTHUMG00000172752.1 87 87 1 ENSG00000240687.1 RP11-521D12.1 chr2 9638772 9649439 + lincRNA NOVEL OTTHUMG00000159115.1 10668 832 3 ENSG00000229425.1 AJ006998.2 chr21 15370522 15402305 - lincRNA NOVEL OTTHUMG00000074333.1 31784 1000 7 ENSG00000224524.1 CYCSP42 chr21 15490530 15490767 - processed_pseudogene KNOWN OTTHUMG00000074331.1 238 238 1 ENSG00000224247.1 AJ009632.3 chr21 15493932 15496124 - lincRNA NOVEL OTTHUMG00000078773.1 2193 1376 2 ENSG00000212564.1 RNU6-1326P chr21 15614283 15614389 + snRNA KNOWN NA 107 107 1 ENSG00000221497.1 AL034449.1 chr21 15693208 15693303 + miRNA NOVEL NA 96 96 1 ENSG00000226298.1 RAD23BLP chr21 15694300 15696581 - processed_pseudogene KNOWN OTTHUMG00000074344.1 2282 1152 2 ENSG00000155313.14 USP25 chr21 15730025 15880069 + protein_coding KNOWN OTTHUMG00000074343.2 150045 7823 116 ENSG00000234159.1 RBPMSLP chr21 15744004 15745080 - processed_pseudogene KNOWN OTTHUMG00000074345.1 1077 502 2 ENSG00000252273.1 RNU6-426P chr21 16035413 16035509 - snRNA KNOWN NA 97 97 1 ENSG00000215386.9 MIR99AHG chr21 16070522 16627397 + lincRNA KNOWN OTTHUMG00000074377.3 556876 5503 95 ENSG00000244260.1 RP11-521D12.2 chr2 9674023 9708413 + lincRNA NOVEL OTTHUMG00000159120.1 34391 1852 5 ENSG00000214976.2 VDAC2P1 chr21 16094415 16095372 - processed_pseudogene KNOWN OTTHUMG00000074376.2 958 958 1 ENSG00000224602.1 RPS26P5 chr21 16121310 16121644 - processed_pseudogene KNOWN OTTHUMG00000074375.1 335 335 1 ENSG00000201025.1 SNORD74 chr21 16284696 16284768 - snoRNA NOVEL NA 73 73 1 ENSG00000270071.1 AP001172.2 chr21 16291791 16308133 - lincRNA NOVEL OTTHUMG00000184146.1 16343 581 3 ENSG00000270139.1 AP001172.3 chr21 16417139 16419080 - lincRNA NOVEL OTTHUMG00000184148.1 1942 467 3 ENSG00000280432.1 AP000962.1 chr21 16525919 16527019 + TEC KNOWN OTTHUMG00000184149.1 1101 1101 1 ENSG00000207638.1 MIR99A chr21 16539089 16539169 + miRNA KNOWN NA 81 81 1 ENSG00000199030.1 MIRLET7C chr21 16539823 16539916 + miRNA KNOWN NA 94 94 1 ENSG00000269950.1 AP000962.2 chr21 16574718 16582637 - lincRNA NOVEL OTTHUMG00000184150.1 7920 729 2 ENSG00000207863.1 MIR125B2 chr21 16590237 16590325 + miRNA KNOWN NA 89 89 1 ENSG00000200034.1 RNU4-73P chr2 9740643 9740783 - snRNA KNOWN NA 141 141 1 ENSG00000228798.1 AP000473.5 chr21 16630827 16640683 + lincRNA NOVEL OTTHUMG00000074396.1 9857 649 4 ENSG00000270093.1 AP000473.8 chr21 16643529 16645065 + lincRNA NOVEL OTTHUMG00000184152.1 1537 1537 1 ENSG00000239023.1 RNU1-98P chr21 16718998 16719157 + snRNA KNOWN NA 160 160 1 ENSG00000237735.2 AP000473.6 chr21 16754519 16815688 - lincRNA NOVEL OTTHUMG00000074394.2 61170 438 3 ENSG00000232886.1 AF212831.2 chr21 16862875 16873691 - lincRNA NOVEL OTTHUMG00000074395.1 10817 377 4 ENSG00000225735.1 NEK4P1 chr21 17210469 17211347 - processed_pseudogene KNOWN OTTHUMG00000074393.1 879 879 1 ENSG00000278181.1 AP000457.2 chr21 17296219 17296596 + processed_pseudogene KNOWN OTTHUMG00000187954.1 378 378 1 ENSG00000252462.1 RNU6-113P chr21 17431547 17431647 + snRNA KNOWN NA 101 101 1 ENSG00000232560.5 LINC01549 chr21 17438890 17449185 + lincRNA KNOWN OTTHUMG00000074397.1 10296 714 7 ENSG00000226580.1 RPL39P40 chr21 17500679 17500824 - processed_pseudogene KNOWN OTTHUMG00000074503.1 146 146 1 ENSG00000240960.1 RP11-521D12.4 chr2 9746704 9746869 + processed_pseudogene KNOWN OTTHUMG00000159121.1 166 166 1 ENSG00000266195.2 RN7SL163P chr21 17506453 17506728 + misc_RNA KNOWN NA 276 276 1 ENSG00000154639.17 CXADR chr21 17512382 17593579 + protein_coding KNOWN OTTHUMG00000074508.2 81198 6682 27 ENSG00000232260.2 BTF3L4P1 chr21 17518526 17518993 - processed_pseudogene KNOWN OTTHUMG00000074502.2 468 468 1 ENSG00000200754.1 Y_RNA chr21 17527140 17527247 - misc_RNA NOVEL NA 108 108 1 ENSG00000199962.1 Y_RNA chr21 17576798 17576906 + misc_RNA NOVEL NA 109 109 1 ENSG00000154640.13 BTG3 chr21 17593653 17612947 - protein_coding KNOWN OTTHUMG00000074501.2 19295 2306 20 ENSG00000280594.1 AP000432.1 chr21 17611744 17633199 + processed_transcript NOVEL OTTHUMG00000190270.1 21456 2578 4 ENSG00000226956.1 AP000432.2 chr21 17659276 17660384 - lincRNA NOVEL OTTHUMG00000074507.1 1109 516 2 ENSG00000279648.1 AP000432.3 chr21 17705408 17707455 + TEC KNOWN OTTHUMG00000177531.1 2048 2048 1 ENSG00000240770.4 C21orf91-OT1 chr21 17763315 17792523 - lincRNA NOVEL OTTHUMG00000074506.1 29209 998 12 ENSG00000243491.1 RP11-521D12.5 chr2 9757496 9770341 - lincRNA NOVEL OTTHUMG00000159119.1 12846 1947 2 ENSG00000154642.9 C21orf91 chr21 17788967 17819386 - protein_coding KNOWN OTTHUMG00000074509.7 30420 6235 25 ENSG00000244676.4 AL109761.5 chr21 17793488 17810845 + antisense NOVEL OTTHUMG00000074504.1 17358 454 4 ENSG00000231755.1 CHODL-AS1 chr21 17835016 17885608 - lincRNA KNOWN OTTHUMG00000074500.1 50593 1117 3 ENSG00000221335.1 AP000745.1 chr21 17891711 17891799 + miRNA NOVEL NA 89 89 1 ENSG00000215369.3 RPL37P3 chr21 17894193 17894485 - processed_pseudogene KNOWN OTTHUMG00000074505.1 293 293 1 ENSG00000154645.12 CHODL chr21 17901263 18267373 + protein_coding KNOWN OTTHUMG00000074519.4 366111 3093 41 ENSG00000227330.1 AP000998.2 chr21 18022370 18114904 - lincRNA NOVEL OTTHUMG00000074517.1 92535 478 5 ENSG00000154646.7 TMPRSS15 chr21 18269116 18485879 - protein_coding KNOWN OTTHUMG00000074518.6 216764 4233 37 ENSG00000228708.1 AL109763.1 chr21 18477358 18486599 - sense_overlapping NOVEL OTTHUMG00000074548.1 9242 461 2 ENSG00000224141.4 AL109763.2 chr21 18561265 18760003 - lincRNA NOVEL OTTHUMG00000074544.1 198739 1454 12 ENSG00000115750.15 TAF1B chr2 9843354 9934416 + protein_coding KNOWN OTTHUMG00000151673.4 91063 4064 74 ENSG00000230233.1 AF240627.2 chr21 18614431 18650360 + lincRNA NOVEL OTTHUMG00000074543.1 35930 879 3 ENSG00000265841.1 MIR548X chr21 18686090 18686164 - miRNA KNOWN NA 75 75 1 ENSG00000221041.2 AP001537.1 chr21 18704371 18704454 - miRNA NOVEL NA 84 84 1 ENSG00000198618.5 PPIAP22 chr21 18857779 18858276 + processed_pseudogene KNOWN OTTHUMG00000074545.1 498 498 1 ENSG00000279156.1 RP4-646P19.1 chr21 18917213 18917429 + TEC KNOWN OTTHUMG00000172749.1 217 217 1 ENSG00000232193.1 AL157359.4 chr21 18917934 18935859 - lincRNA NOVEL OTTHUMG00000074549.1 17926 784 2 ENSG00000226204.1 AL157359.3 chr21 18953264 18967058 - lincRNA NOVEL OTTHUMG00000074546.1 13795 424 2 ENSG00000235965.2 AP000431.1 chr21 19046310 19047684 - lincRNA NOVEL OTTHUMG00000074542.2 1375 790 2 ENSG00000229289.1 AP000431.2 chr21 19130523 19134423 + lincRNA NOVEL OTTHUMG00000074550.1 3901 469 2 ENSG00000226818.1 SLC6A6P1 chr21 19244543 19246392 + processed_pseudogene KNOWN OTTHUMG00000074547.1 1850 1850 1 ENSG00000269973.1 RP11-95D17.1 chr2 9936360 9939590 + lincRNA NOVEL OTTHUMG00000183966.2 3231 3231 1 ENSG00000231620.1 AP000855.4 chr21 19301613 19303739 + lincRNA NOVEL OTTHUMG00000074551.1 2127 636 2 ENSG00000212609.1 RNU1-139P chr21 19345148 19345312 + snRNA KNOWN NA 165 165 1 ENSG00000230198.1 RPL37P4 chr21 19593841 19594108 + processed_pseudogene KNOWN OTTHUMG00000074608.1 268 268 1 ENSG00000271486.1 AP000403.3 chr21 19620695 19621545 + processed_pseudogene KNOWN OTTHUMG00000184880.1 851 851 1 ENSG00000229336.1 AP000568.2 chr21 19739709 19740150 + processed_pseudogene KNOWN OTTHUMG00000074609.2 442 442 1 ENSG00000215353.2 C1QBPP chr21 19759359 19760128 - processed_pseudogene KNOWN OTTHUMG00000074605.1 770 770 1 ENSG00000233480.1 AP000946.2 chr21 19893279 19899755 - lincRNA NOVEL OTTHUMG00000074607.1 6477 412 3 ENSG00000233236.1 AP001171.1 chr21 20256752 20258820 - lincRNA NOVEL OTTHUMG00000074606.1 2069 864 2 ENSG00000251851.1 RNU6-772P chr21 20355748 20355852 - snRNA KNOWN NA 105 105 1 ENSG00000252963.1 RN7SKP147 chr21 20356653 20356896 + misc_RNA KNOWN NA 244 244 1 ENSG00000206652.1 RNU1-1 chr1 16514122 16514285 - snRNA KNOWN NA 164 164 1 ENSG00000134317.16 GRHL1 chr2 9951693 10002277 + protein_coding KNOWN OTTHUMG00000151704.6 50585 7952 79 ENSG00000233676.2 FDPSP6 chr21 20388334 20388845 + processed_pseudogene KNOWN OTTHUMG00000078059.2 512 512 1 ENSG00000234439.1 KRT18P2 chr21 20424949 20426206 - processed_pseudogene KNOWN OTTHUMG00000078062.1 1258 1258 1 ENSG00000233206.1 RPS3AP1 chr21 20430443 20430762 - processed_pseudogene KNOWN OTTHUMG00000078061.1 320 320 1 ENSG00000276738.1 AP001506.1 chr21 20597953 20598163 + processed_pseudogene KNOWN OTTHUMG00000187955.1 211 211 1 ENSG00000224924.5 LINC00320 chr21 20742590 20803216 - lincRNA KNOWN OTTHUMG00000078063.2 60627 2325 37 ENSG00000215351.3 PPIAP1 chr21 20828127 20828622 - processed_pseudogene KNOWN OTTHUMG00000078060.1 496 496 1 ENSG00000154654.13 NCAM2 chr21 20998315 21543329 + protein_coding KNOWN OTTHUMG00000078121.3 545015 8380 48 ENSG00000226771.1 AP001136.2 chr21 21223295 21226829 - antisense NOVEL OTTHUMG00000078120.1 3535 635 2 ENSG00000221210.1 AP001137.1 chr21 21397748 21397826 - miRNA NOVEL NA 79 79 1 ENSG00000234730.1 AF241725.4 chr21 21566763 21615437 + lincRNA NOVEL OTTHUMG00000078122.1 48675 609 2 ENSG00000188525.3 AC010969.1 chr2 10003158 10006030 - antisense NOVEL OTTHUMG00000119005.2 2873 2412 2 ENSG00000237527.1 AF241725.6 chr21 21655038 21686329 - lincRNA NOVEL OTTHUMG00000078124.1 31292 480 5 ENSG00000238265.1 LINC00317 chr21 21723293 21737319 - lincRNA KNOWN OTTHUMG00000078123.1 14027 612 3 ENSG00000233997.4 LINC01425 chr21 21746973 21797415 + lincRNA NOVEL OTTHUMG00000078125.1 50443 772 9 ENSG00000227075.1 AP000472.3 chr21 21933315 21975681 - lincRNA NOVEL OTTHUMG00000078257.1 42367 530 3 ENSG00000233215.4 AP000472.2 chr21 22008944 22098459 - lincRNA NOVEL OTTHUMG00000078243.1 89516 1486 12 ENSG00000184856.6 LINC00308 chr21 22098617 22116528 + lincRNA KNOWN OTTHUMG00000078244.2 17912 727 6 ENSG00000234340.1 AP000705.8 chr21 22134698 22136083 - processed_pseudogene KNOWN OTTHUMG00000156301.1 1386 1386 1 ENSG00000231136.1 AP000705.6 chr21 22153950 22154299 - processed_pseudogene KNOWN OTTHUMG00000078252.1 350 350 1 ENSG00000202339.1 RNU4-45P chr21 22205192 22205332 + snRNA KNOWN NA 141 141 1 ENSG00000226043.1 AP000705.7 chr21 22209939 22420819 + lincRNA NOVEL OTTHUMG00000078249.1 210881 435 3 ENSG00000260476.1 RP11-254F7.1 chr2 10021578 10022825 + lincRNA NOVEL OTTHUMG00000175723.1 1248 1248 1 ENSG00000223488.2 MAPK6PS2 chr21 22436290 22438349 - processed_pseudogene KNOWN OTTHUMG00000078251.1 2060 2060 1 ENSG00000234034.1 AP000959.2 chr21 22500604 22520058 - lincRNA NOVEL OTTHUMG00000078247.1 19455 977 3 ENSG00000225906.1 AP000949.1 chr21 22882582 22884000 + processed_pseudogene KNOWN OTTHUMG00000078254.1 1419 629 3 ENSG00000230972.1 AP001255.2 chr21 23065491 23131206 + lincRNA NOVEL OTTHUMG00000078253.1 65716 762 5 ENSG00000275469.1 MIR6130 chr21 23079284 23079392 + miRNA KNOWN NA 109 109 1 ENSG00000219368.3 ZNF299P chr21 23090028 23091831 - processed_pseudogene KNOWN OTTHUMG00000078250.1 1804 1804 1 ENSG00000231058.1 MSANTD2P1 chr21 23101223 23103074 + processed_pseudogene KNOWN OTTHUMG00000078255.1 1852 1368 3 ENSG00000223078.1 RNU2-55P chr21 23281736 23281909 - snRNA KNOWN NA 174 174 1 ENSG00000228592.1 D21S2088E chr21 23361104 23384861 - lincRNA NOVEL OTTHUMG00000078246.1 23758 1725 5 ENSG00000223822.2 EEF1A1P1 chr21 23390258 23390996 + processed_pseudogene KNOWN OTTHUMG00000078248.1 739 739 1 ENSG00000260077.1 RP11-254F7.2 chr2 10039092 10040663 - lincRNA NOVEL OTTHUMG00000175729.1 1572 1572 1 ENSG00000237569.1 TUBAP chr21 23407658 23409128 - processed_pseudogene KNOWN OTTHUMG00000078256.1 1471 1352 2 ENSG00000199698.1 Y_RNA chr21 23432181 23432282 - misc_RNA NOVEL NA 102 102 1 ENSG00000227716.1 AP000459.7 chr21 23477641 23490724 + lincRNA NOVEL OTTHUMG00000078245.1 13084 861 2 ENSG00000277305.1 AP000960.1 chr21 23841559 23841643 - miRNA NOVEL NA 85 85 1 ENSG00000231986.1 AP000474.1 chr21 23888798 23890541 - lincRNA NOVEL OTTHUMG00000078274.1 1744 680 3 ENSG00000235564.1 AP000477.2 chr21 23960905 23967273 - lincRNA NOVEL OTTHUMG00000078275.2 6369 778 2 ENSG00000226996.4 AP000477.3 chr21 24043257 24050286 + lincRNA NOVEL OTTHUMG00000078273.1 7030 984 4 ENSG00000224018.1 AP000470.2 chr21 24155170 24188342 - lincRNA NOVEL OTTHUMG00000078333.1 33173 693 3 ENSG00000224832.1 AP000469.2 chr21 24304550 24321377 - lincRNA NOVEL OTTHUMG00000078332.1 16828 2007 4 ENSG00000237484.5 AP000476.1 chr21 24428740 24547942 + lincRNA NOVEL OTTHUMG00000078326.2 119203 4970 12 ENSG00000172059.9 KLF11 chr2 10042849 10054836 + protein_coding KNOWN OTTHUMG00000119004.4 11988 4589 21 ENSG00000226983.2 AP000235.2 chr21 24840550 25057746 + lincRNA NOVEL OTTHUMG00000078331.1 217197 2719 4 ENSG00000227090.1 AP000402.3 chr21 24886676 24902756 - lincRNA NOVEL OTTHUMG00000078329.1 16081 540 2 ENSG00000230379.4 AP000146.2 chr21 24938431 24992817 - lincRNA NOVEL OTTHUMG00000078324.1 54387 614 6 ENSG00000237444.1 AP001342.1 chr21 25031005 25031529 - processed_pseudogene KNOWN OTTHUMG00000156286.1 525 525 1 ENSG00000244278.1 AP000235.3 chr21 25055535 25069906 + lincRNA NOVEL OTTHUMG00000078328.1 14372 479 4 ENSG00000232512.5 AP000233.2 chr21 25095022 25103670 + lincRNA NOVEL OTTHUMG00000078330.1 8649 704 6 ENSG00000274662.1 7SK chr21 25101132 25101415 + misc_RNA NOVEL NA 284 284 1 ENSG00000223870.1 AP000233.3 chr21 25127469 25135247 + lincRNA NOVEL OTTHUMG00000078327.1 7779 291 4 ENSG00000222042.1 AP000233.4 chr21 25169431 25333825 - lincRNA NOVEL OTTHUMG00000078325.3 164395 763 4 ENSG00000238627.1 RNA5SP489 chr21 25202207 25202315 + rRNA KNOWN NA 109 109 1 ENSG00000271787.1 RP11-254F7.3 chr2 10054421 10054866 - antisense NOVEL OTTHUMG00000185549.1 446 446 1 ENSG00000238660.1 AP001340.1 chr21 25339005 25339099 + miRNA NOVEL NA 95 95 1 ENSG00000213885.3 RPL13AP7 chr21 25361821 25362431 + processed_pseudogene KNOWN OTTHUMG00000078369.2 611 611 1 ENSG00000279534.1 AP001340.3 chr21 25371827 25372043 + TEC KNOWN OTTHUMG00000172748.1 217 217 1 ENSG00000185433.7 LINC00158 chr21 25385820 25431701 - lincRNA KNOWN OTTHUMG00000078368.1 45882 2027 16 ENSG00000275053.1 AP000221.2 chr21 25454736 25454842 + miRNA NOVEL NA 107 107 1 ENSG00000229962.1 AP000221.1 chr21 25515473 25518338 - lincRNA NOVEL OTTHUMG00000078370.1 2866 1046 2 ENSG00000234883.3 MIR155HG chr21 25561909 25575168 + lincRNA KNOWN OTTHUMG00000078367.1 13260 1600 4 ENSG00000275402.1 MIR155 chr21 25573980 25574044 + miRNA KNOWN NA 65 65 1 ENSG00000260583.1 AP000223.42 chr21 25582770 25583326 - antisense NOVEL OTTHUMG00000172769.1 557 557 1 ENSG00000154719.12 MRPL39 chr21 25585656 25607517 - protein_coding KNOWN OTTHUMG00000078371.4 21862 1199 29 ENSG00000205795.4 CYS1 chr2 10056780 10080944 - protein_coding KNOWN OTTHUMG00000151703.1 24165 2847 6 ENSG00000154721.13 JAM2 chr21 25639272 25717562 + protein_coding KNOWN OTTHUMG00000078441.3 78291 5933 46 ENSG00000237731.1 RNGTTP1 chr21 25643489 25644216 + processed_pseudogene KNOWN OTTHUMG00000155486.1 728 728 1 ENSG00000227054.1 FDX1P2 chr21 25692180 25692554 + processed_pseudogene KNOWN OTTHUMG00000078440.1 375 375 1 ENSG00000154723.11 ATP5J chr21 25716503 25735673 - protein_coding KNOWN OTTHUMG00000078442.2 19171 2043 33 ENSG00000154727.9 GABPA chr21 25734570 25772460 + protein_coding KNOWN OTTHUMG00000078443.2 37891 5429 24 ENSG00000235514.1 LLPHP2 chr21 25762938 25763333 - processed_pseudogene KNOWN OTTHUMG00000078439.1 396 396 1 ENSG00000142192.19 APP chr21 25880550 26171128 - protein_coding KNOWN OTTHUMG00000078438.9 290579 6316 174 ENSG00000233783.6 AP001442.2 chr21 25928754 25942686 + processed_transcript NOVEL OTTHUMG00000078483.5 13933 3201 16 ENSG00000251972.1 RNU6-123P chr21 25943044 25943145 - snRNA KNOWN NA 102 102 1 ENSG00000224541.1 AP001439.2 chr21 26158091 26175824 + antisense NOVEL OTTHUMG00000078481.1 17734 392 2 ENSG00000233502.1 AC104794.4 chr2 10083781 10086101 + lincRNA NOVEL OTTHUMG00000151705.2 2321 312 3 ENSG00000273492.4 AP000230.1 chr21 26170871 26217381 + lincRNA NOVEL OTTHUMG00000186038.1 46511 2044 7 ENSG00000206802.1 RNU6-926P chr21 26190707 26190813 + snRNA KNOWN NA 107 107 1 ENSG00000229025.1 AP001595.1 chr21 26349780 26350634 - lincRNA NOVEL OTTHUMG00000078482.1 855 516 2 ENSG00000232692.1 AP001596.6 chr21 26378552 26471698 + antisense NOVEL OTTHUMG00000078661.2 93147 2247 14 ENSG00000197934.7 CYYR1-AS1 chr21 26393635 26569252 + antisense NOVEL OTTHUMG00000078660.1 175618 3713 8 ENSG00000273115.1 KB-1466C5.1 chr21 26459903 26460214 - lincRNA NOVEL OTTHUMG00000186039.1 312 312 1 ENSG00000166265.10 CYYR1 chr21 26466209 26573284 - protein_coding KNOWN OTTHUMG00000078689.2 107076 3266 8 ENSG00000154734.13 ADAMTS1 chr21 26835747 26845409 - protein_coding KNOWN OTTHUMG00000078688.3 9663 7063 28 ENSG00000223563.1 AP001601.2 chr21 26889376 26939742 + antisense NOVEL OTTHUMG00000078687.1 50367 361 3 ENSG00000154736.5 ADAMTS5 chr21 26917912 26966513 - protein_coding KNOWN OTTHUMG00000078686.1 48602 9056 8 ENSG00000212558.1 SNORA26 chr2 10090205 10090319 - snoRNA NOVEL NA 115 115 1 ENSG00000266133.1 MIR4759 chr21 26953961 26954043 + miRNA KNOWN NA 83 83 1 ENSG00000215326.3 GPX1P2 chr21 27143344 27143949 - processed_pseudogene KNOWN OTTHUMG00000078697.1 606 606 1 ENSG00000281587.1 AP001604.1 chr21 27302659 27302710 + miRNA NOVEL NA 52 52 1 ENSG00000231236.2 AP001604.3 chr21 27358885 27448579 - lincRNA NOVEL OTTHUMG00000078699.2 89695 2603 4 ENSG00000236332.1 AP001605.4 chr21 27361164 27395787 + lincRNA NOVEL OTTHUMG00000078698.1 34624 954 5 ENSG00000233300.1 EIF4A1P1 chr21 27367014 27367947 - processed_pseudogene KNOWN OTTHUMG00000078696.1 934 934 1 ENSG00000217026.3 RPL10P1 chr21 27420380 27421023 - processed_pseudogene KNOWN OTTHUMG00000078695.1 644 644 1 ENSG00000219592.2 NCSTNP1 chr21 27492118 27492261 + processed_pseudogene KNOWN OTTHUMG00000078705.2 144 144 1 ENSG00000234052.1 AP001607.1 chr21 27638693 27653491 + lincRNA NOVEL OTTHUMG00000078707.1 14799 468 3 ENSG00000225298.4 LINC00113 chr21 27722379 27751233 + lincRNA KNOWN OTTHUMG00000078708.1 28855 611 12 ENSG00000272524.1 RP11-254F7.4 chr2 10120734 10121065 + lincRNA NOVEL OTTHUMG00000185555.1 332 332 1 ENSG00000234083.1 AJ006995.3 chr21 27954922 27985295 + lincRNA NOVEL OTTHUMG00000074159.1 30374 572 3 ENSG00000178457.3 LINC00314 chr21 28013363 28023233 + lincRNA KNOWN OTTHUMG00000074158.1 9871 607 2 ENSG00000232079.5 AL035610.1 chr21 28048404 28137611 + processed_transcript NOVEL OTTHUMG00000078709.4 89208 4053 20 ENSG00000236532.4 AL035610.2 chr21 28116094 28228667 - lincRNA NOVEL OTTHUMG00000078706.1 112574 4753 13 ENSG00000281339.1 AL035610.3 chr21 28150606 28150677 + miRNA NOVEL NA 72 72 1 ENSG00000232855.5 AF131217.1 chr21 28439346 28674848 - lincRNA NOVEL OTTHUMG00000078747.3 235503 6532 12 ENSG00000226935.5 LINC00161 chr21 28539318 28540355 + lincRNA KNOWN OTTHUMG00000078748.1 1038 870 4 ENSG00000156239.10 N6AMT1 chr21 28872191 28885371 - protein_coding KNOWN OTTHUMG00000078750.4 13181 4865 18 ENSG00000215005.2 HSPD1P7 chr21 28887280 28889272 - processed_pseudogene KNOWN OTTHUMG00000078751.2 1993 1686 2 ENSG00000215317.2 THUMPD1P1 chr21 28901779 28903697 - processed_pseudogene KNOWN OTTHUMG00000078749.1 1919 1041 3 ENSG00000261135.1 RP4-798A10.7 chr1 16514645 16515754 + lincRNA NOVEL OTTHUMG00000175735.1 1110 1110 1 ENSG00000171848.12 RRM2 chr2 10122328 10131419 + protein_coding KNOWN OTTHUMG00000090449.5 9092 4955 61 ENSG00000198862.12 LTN1 chr21 28928144 28992956 - protein_coding KNOWN OTTHUMG00000078803.4 64813 8876 118 ENSG00000176054.6 RPL23P2 chr21 28997613 28998033 - processed_pseudogene KNOWN OTTHUMG00000078804.1 421 421 1 ENSG00000156253.5 RWDD2B chr21 29004384 29019378 - protein_coding KNOWN OTTHUMG00000078805.2 14995 3395 29 ENSG00000273254.1 RP1-100J12.1 chr21 29024255 29024890 - antisense NOVEL OTTHUMG00000186465.1 636 636 1 ENSG00000156256.13 USP16 chr21 29024629 29054488 + protein_coding KNOWN OTTHUMG00000078802.1 29860 5694 79 ENSG00000156261.11 CCT8 chr21 29055805 29073797 - protein_coding KNOWN OTTHUMG00000044595.4 17993 3341 102 ENSG00000231125.2 AF129075.5 chr21 29058073 29060095 - sense_intronic NOVEL OTTHUMG00000078807.2 2023 794 2 ENSG00000156265.14 MAP3K7CL chr21 29077471 29175889 + protein_coding KNOWN OTTHUMG00000078806.6 98419 4497 100 ENSG00000232687.1 RPL12P9 chr21 29127701 29128188 - processed_pseudogene KNOWN OTTHUMG00000155485.2 488 488 1 ENSG00000201984.1 Y_RNA chr21 29139283 29139384 - misc_RNA NOVEL NA 102 102 1 ENSG00000163009.7 C2orf48 chr2 10141382 10211725 + lincRNA KNOWN OTTHUMG00000119017.1 70344 1897 7 ENSG00000212479.2 U3 chr21 29180425 29180639 - snoRNA NOVEL NA 215 215 1 ENSG00000224649.1 AF124730.4 chr21 29182027 29187795 - antisense NOVEL OTTHUMG00000078877.1 5769 327 2 ENSG00000215533.7 LINC00189 chr21 29193480 29288205 + sense_overlapping KNOWN OTTHUMG00000078876.1 94726 1087 8 ENSG00000156273.14 BACH1 chr21 29194071 29630751 + protein_coding KNOWN OTTHUMG00000078878.7 436681 7717 45 ENSG00000236056.1 GAPDHP14 chr21 29222321 29223257 + processed_pseudogene KNOWN OTTHUMG00000078875.1 937 937 1 ENSG00000248476.1 BACH1-IT1 chr21 29351634 29361894 + sense_intronic NOVEL OTTHUMG00000078881.1 10261 821 4 ENSG00000273017.1 AP000240.9 chr21 29359002 29359453 + sense_intronic NOVEL OTTHUMG00000186466.1 452 452 1 ENSG00000232118.2 BACH1-AS1 chr21 29370019 29376339 - lincRNA NOVEL OTTHUMG00000081874.3 6321 879 4 ENSG00000228817.4 BACH1-IT2 chr21 29370497 29373709 + lincRNA NOVEL OTTHUMG00000078880.4 3213 1291 8 ENSG00000234293.1 BACH1-IT3 chr21 29496047 29500386 + sense_intronic NOVEL OTTHUMG00000078874.1 4340 406 2 ENSG00000206647.1 SNORA2 chr2 10155072 10155206 - snoRNA NOVEL NA 135 135 1 ENSG00000171189.15 GRIK1 chr21 29536933 29940033 - protein_coding KNOWN OTTHUMG00000078879.1 403101 4243 157 ENSG00000273464.1 RP11-313P22.1 chr21 29657406 29657831 + antisense NOVEL OTTHUMG00000186469.1 426 426 1 ENSG00000281868.1 AP000237.1 chr21 29712038 29712125 + miRNA NOVEL NA 88 88 1 ENSG00000174680.8 GRIK1-AS1 chr21 29748175 29764002 + antisense KNOWN OTTHUMG00000081875.1 15828 1330 16 ENSG00000259981.1 AF096876.1 chr21 30089717 30097836 + lincRNA NOVEL OTTHUMG00000172753.1 8120 444 2 ENSG00000156282.4 CLDN17 chr21 30165564 30166756 - protein_coding KNOWN OTTHUMG00000081873.1 1193 1193 1 ENSG00000227342.1 LINC00307 chr21 30209151 30211783 - lincRNA NOVEL OTTHUMG00000081871.1 2633 424 3 ENSG00000156284.5 CLDN8 chr21 30214006 30216073 - protein_coding KNOWN OTTHUMG00000081872.1 2068 2068 1 ENSG00000225267.1 RPL8P2 chr21 30263380 30263881 - processed_pseudogene KNOWN OTTHUMG00000081870.1 502 502 1 ENSG00000188694.5 KRTAP24-1 chr21 30281309 30282958 - protein_coding KNOWN OTTHUMG00000125483.3 1650 1650 1 ENSG00000265418.1 MIR4261 chr2 10192614 10192671 - miRNA KNOWN NA 58 58 1 ENSG00000232263.1 KRTAP25-1 chr21 30289145 30289514 - protein_coding KNOWN OTTHUMG00000125482.1 370 370 1 ENSG00000197683.4 KRTAP26-1 chr21 30319124 30320316 - protein_coding KNOWN OTTHUMG00000057766.1 1193 1193 1 ENSG00000206107.2 KRTAP27-1 chr21 30337013 30337694 - protein_coding KNOWN OTTHUMG00000059577.3 682 682 1 ENSG00000182816.7 KRTAP13-2 chr21 30348075 30425912 - protein_coding KNOWN OTTHUMG00000057793.2 77838 1240 4 ENSG00000186980.6 KRTAP23-1 chr21 30348399 30348609 - protein_coding KNOWN OTTHUMG00000057792.4 211 211 1 ENSG00000250973.1 KRTAP13-6P chr21 30356515 30356885 - unprocessed_pseudogene KNOWN OTTHUMG00000057780.2 371 371 1 ENSG00000265007.1 MIR4327 chr21 30375294 30375378 - miRNA KNOWN NA 85 85 1 ENSG00000198390.4 KRTAP13-1 chr21 30396074 30396822 + protein_coding KNOWN OTTHUMG00000057800.3 749 749 1 ENSG00000240432.3 KRTAP13-3 chr21 30425265 30425968 - protein_coding KNOWN OTTHUMG00000057776.2 704 704 1 ENSG00000186971.3 KRTAP13-4 chr21 30430230 30431026 + protein_coding KNOWN OTTHUMG00000057770.1 797 797 1 ENSG00000264030.2 RN7SL66P chr2 10280628 10280891 + misc_RNA KNOWN NA 264 264 1 ENSG00000233640.2 KRTAP13-5P chr21 30436466 30436964 - unprocessed_pseudogene KNOWN OTTHUMG00000057795.2 499 499 1 ENSG00000186970.4 KRTAP15-1 chr21 30440275 30440945 + protein_coding KNOWN OTTHUMG00000057784.1 671 671 1 ENSG00000184351.7 KRTAP19-1 chr21 30479699 30480344 - protein_coding KNOWN OTTHUMG00000057768.2 646 646 1 ENSG00000244025.3 KRTAP19-3 chr21 30480048 30491985 - protein_coding KNOWN OTTHUMG00000057782.2 11938 611 3 ENSG00000186965.4 KRTAP19-2 chr21 30487057 30487436 - protein_coding KNOWN OTTHUMG00000057772.3 380 380 1 ENSG00000186967.6 KRTAP19-4 chr21 30496824 30497133 - protein_coding KNOWN OTTHUMG00000057767.2 310 310 1 ENSG00000186977.2 KRTAP19-5 chr21 30501657 30502117 - protein_coding KNOWN OTTHUMG00000057774.2 461 461 1 ENSG00000237841.1 KRTAP19-9P chr21 30510307 30510497 - unprocessed_pseudogene KNOWN OTTHUMG00000057789.2 191 191 1 ENSG00000235312.1 KRTAP19-10P chr21 30514613 30514799 - unprocessed_pseudogene KNOWN OTTHUMG00000057775.2 187 187 1 ENSG00000218125.1 AP000567.27 chr21 30526546 30526701 - unprocessed_pseudogene KNOWN OTTHUMG00000057783.2 156 156 1 ENSG00000206898.1 SNORA51 chr2 10296047 10296180 - snoRNA NOVEL NA 134 134 1 ENSG00000236612.1 KRTAP19-11P chr21 30537278 30537381 - unprocessed_pseudogene KNOWN OTTHUMG00000057799.1 104 104 1 ENSG00000186925.6 KRTAP19-6 chr21 30541535 30541864 - protein_coding KNOWN OTTHUMG00000057779.4 330 330 1 ENSG00000244362.2 KRTAP19-7 chr21 30541660 30561314 - protein_coding KNOWN OTTHUMG00000057785.2 19655 522 3 ENSG00000206106.2 KRTAP22-2 chr21 30590105 30590397 - protein_coding KNOWN OTTHUMG00000065630.2 293 293 1 ENSG00000212938.3 KRTAP6-3 chr21 30592440 30593075 + protein_coding KNOWN OTTHUMG00000057791.3 636 636 1 ENSG00000186930.4 KRTAP6-2 chr21 30598590 30598902 - protein_coding KNOWN OTTHUMG00000057794.3 313 313 1 ENSG00000186924.3 KRTAP22-1 chr21 30601087 30601382 + protein_coding KNOWN OTTHUMG00000057778.2 296 296 1 ENSG00000184724.5 KRTAP6-1 chr21 30613431 30613930 - protein_coding KNOWN OTTHUMG00000057788.2 500 500 1 ENSG00000244624.3 KRTAP20-1 chr21 30616425 30616699 + protein_coding KNOWN OTTHUMG00000057801.3 275 275 1 ENSG00000206105.2 KRTAP20-4 chr21 30620627 30620850 + protein_coding KNOWN OTTHUMG00000125519.1 224 224 1 ENSG00000115756.11 HPCAL1 chr2 10302889 10427617 + protein_coding KNOWN OTTHUMG00000090451.3 124729 6237 42 ENSG00000184032.2 KRTAP20-2 chr21 30635236 30635619 + protein_coding KNOWN OTTHUMG00000057786.3 384 384 1 ENSG00000206104.2 KRTAP20-3 chr21 30642864 30643136 + protein_coding KNOWN OTTHUMG00000057798.2 273 273 1 ENSG00000231068.1 KRTAP21-3 chr21 30718525 30718777 - protein_coding KNOWN OTTHUMG00000125533.1 253 253 1 ENSG00000236400.1 KRTAP21-4P chr21 30741780 30742595 - unprocessed_pseudogene KNOWN OTTHUMG00000057790.1 816 816 1 ENSG00000187026.2 KRTAP21-2 chr21 30746794 30747233 - protein_coding KNOWN OTTHUMG00000057769.2 440 440 1 ENSG00000187005.4 KRTAP21-1 chr21 30754830 30755428 - protein_coding KNOWN OTTHUMG00000057777.2 599 599 1 ENSG00000238257.1 AP000244.11 chr21 30762682 30762882 - unprocessed_pseudogene KNOWN OTTHUMG00000084862.1 201 201 1 ENSG00000233036.1 KRTAP8-2P chr21 30802242 30802427 - unprocessed_pseudogene KNOWN OTTHUMG00000057797.2 186 186 1 ENSG00000227840.1 KRTAP8-3P chr21 30806932 30807119 - unprocessed_pseudogene KNOWN OTTHUMG00000057781.2 188 188 1 ENSG00000183640.5 KRTAP8-1 chr21 30812697 30813252 - protein_coding KNOWN OTTHUMG00000057771.1 556 556 1 ENSG00000115758.11 ODC1 chr2 10439968 10448504 - protein_coding KNOWN OTTHUMG00000090450.3 8537 2968 33 ENSG00000274749.1 KRTAP7-1 chr21 30829039 30829759 - protein_coding KNOWN OTTHUMG00000188305.1 721 721 1 ENSG00000182591.5 KRTAP11-1 chr21 30880644 30881555 - protein_coding KNOWN OTTHUMG00000057773.1 912 912 1 ENSG00000206102.2 KRTAP19-8 chr21 31038159 31038476 - protein_coding KNOWN OTTHUMG00000057787.3 318 318 1 ENSG00000228941.1 UBE3AP2 chr21 31060600 31063168 - processed_pseudogene KNOWN OTTHUMG00000084863.1 2569 2259 2 ENSG00000156299.11 TIAM1 chr21 31118416 31559977 - protein_coding KNOWN OTTHUMG00000084869.3 441562 8751 76 ENSG00000237325.3 AP000563.2 chr21 31452466 31453223 + processed_pseudogene KNOWN OTTHUMG00000084871.2 758 758 1 ENSG00000237594.2 AP000251.3 chr21 31559245 31560487 + antisense NOVEL OTTHUMG00000186474.1 1243 822 2 ENSG00000230870.2 FBXW11P1 chr21 31627127 31628600 - processed_pseudogene KNOWN OTTHUMG00000084868.1 1474 1474 1 ENSG00000234509.1 AP000253.1 chr21 31653593 31659500 - lincRNA NOVEL OTTHUMG00000084879.1 5908 2233 3 ENSG00000142168.13 SOD1 chr21 31659622 31668931 + protein_coding KNOWN OTTHUMG00000084878.2 9310 2019 20 ENSG00000206633.1 SNORA80B chr2 10446714 10446849 - snoRNA KNOWN NA 136 136 1 ENSG00000238390.1 SNORA81 chr21 31664306 31664482 + snoRNA NOVEL NA 177 177 1 ENSG00000273271.1 AP000254.8 chr21 31666728 31667247 - antisense NOVEL OTTHUMG00000186467.1 520 520 1 ENSG00000156304.13 SCAF4 chr21 31671033 31732075 - protein_coding KNOWN OTTHUMG00000084903.5 61043 5901 83 ENSG00000229046.1 HMGN1P2 chr21 31706555 31706864 + processed_pseudogene KNOWN OTTHUMG00000084901.2 310 310 1 ENSG00000273091.1 AP000255.6 chr21 31735732 31736407 + lincRNA NOVEL OTTHUMG00000186475.1 676 676 1 ENSG00000234107.1 TPT1P1 chr21 31840341 31840858 + processed_pseudogene KNOWN OTTHUMG00000084902.1 518 518 1 ENSG00000142149.7 HUNK chr21 31873315 32044633 + protein_coding KNOWN OTTHUMG00000085019.2 171319 8294 24 ENSG00000237138.1 HUNK-AS1 chr21 32020966 32021782 - antisense NOVEL OTTHUMG00000085305.1 817 616 2 ENSG00000230323.4 LINC00159 chr21 32080316 32197813 - lincRNA KNOWN OTTHUMG00000085307.1 117498 572 7 ENSG00000264055.1 AP000261.1 chr21 32151905 32152008 + miRNA NOVEL NA 104 104 1 ENSG00000257135.4 RP11-320M2.1 chr2 10448694 10451327 + lincRNA NOVEL OTTHUMG00000170230.1 2634 1753 7 ENSG00000261610.1 AP000265.1 chr21 32259804 32261585 - lincRNA NOVEL OTTHUMG00000172750.1 1782 1782 1 ENSG00000159055.3 MIS18A chr21 32268219 32279069 - protein_coding KNOWN OTTHUMG00000085308.1 10851 1723 7 ENSG00000227256.1 MIS18A-AS1 chr21 32277863 32280988 + antisense NOVEL OTTHUMG00000085306.1 3126 769 3 ENSG00000170262.11 MRAP chr21 32291813 32314784 + protein_coding KNOWN OTTHUMG00000085309.1 22972 1346 15 ENSG00000232623.1 AP000266.7 chr21 32306464 32308737 - antisense NOVEL OTTHUMG00000085304.1 2274 582 2 ENSG00000142207.6 URB1 chr21 32311018 32393026 - protein_coding KNOWN OTTHUMG00000064919.3 82009 11461 43 ENSG00000200792.1 SNORA80A chr21 32377187 32377322 - snoRNA KNOWN NA 136 136 1 ENSG00000256073.3 URB1-AS1 chr21 32393130 32393960 + lincRNA KNOWN OTTHUMG00000064921.2 831 831 1 ENSG00000166979.11 EVA1C chr21 32412006 32515397 + protein_coding KNOWN OTTHUMG00000064922.4 103392 4353 73 ENSG00000229007.1 EXOSC3P1 chr21 32496812 32497311 + processed_pseudogene KNOWN OTTHUMG00000064920.1 500 500 1 ENSG00000224174.2 RP4-798A10.4 chr1 16520694 16521796 + lincRNA NOVEL OTTHUMG00000002490.2 1103 327 2 ENSG00000217258.2 AC007249.3 chr2 10452319 10455552 + lincRNA NOVEL OTTHUMG00000151706.2 3234 494 4 ENSG00000252045.1 SNORA33 chr21 32538299 32538434 + snoRNA NOVEL NA 136 136 1 ENSG00000252950.1 RNA5SP490 chr21 32563075 32563210 + rRNA KNOWN NA 136 136 1 ENSG00000186842.4 LINC00846 chr21 32572238 32575881 - 3prime_overlapping_ncrna NOVEL OTTHUMG00000190260.1 3644 1778 4 ENSG00000242220.5 TCP10L chr21 32574841 32587373 - protein_coding KNOWN OTTHUMG00000064901.7 12533 3026 18 ENSG00000265590.8 AP000275.65 chr21 32578822 32612281 - protein_coding PUTATIVE OTTHUMG00000064928.8 33460 1026 15 ENSG00000159079.17 C21orf59 chr21 32592079 32612866 - protein_coding KNOWN OTTHUMG00000179510.1 20788 3353 36 ENSG00000228433.1 OR7E23P chr21 32621049 32622096 + processed_pseudogene KNOWN OTTHUMG00000064927.1 1048 1048 1 ENSG00000238220.1 AP000275.64 chr21 32624416 32625096 - processed_pseudogene KNOWN OTTHUMG00000128947.1 681 390 2 ENSG00000159082.16 SYNJ1 chr21 32628759 32728048 - protein_coding KNOWN OTTHUMG00000064926.13 99290 8070 193 ENSG00000238197.4 PAXBP1-AS1 chr21 32728115 32743122 + antisense NOVEL OTTHUMG00000064979.3 15008 4046 9 ENSG00000115761.14 NOL10 chr2 10570766 10689987 - protein_coding KNOWN OTTHUMG00000119023.2 119222 3824 74 ENSG00000273662.1 AP000279.1 chr21 32730987 32731044 + miRNA NOVEL NA 58 58 1 ENSG00000159086.13 PAXBP1 chr21 32733899 32771858 - protein_coding KNOWN OTTHUMG00000064980.8 37960 7212 94 ENSG00000205930.7 C21orf62-AS1 chr21 32772100 32893735 + lincRNA KNOWN OTTHUMG00000064992.5 121636 3504 23 ENSG00000279690.1 AP000280.66 chr21 32790673 32791504 - TEC KNOWN OTTHUMG00000064991.6 832 832 1 ENSG00000205929.8 C21orf62 chr21 32790674 32813743 - protein_coding KNOWN OTTHUMG00000163477.2 23070 4122 14 ENSG00000224427.1 AP000281.1 chr21 32841496 32841811 - processed_pseudogene KNOWN OTTHUMG00000064933.1 316 316 1 ENSG00000207098.1 SNORA70 chr21 32841861 32841995 - snoRNA NOVEL NA 135 135 1 ENSG00000232360.1 AP000281.2 chr21 32844367 32849934 - antisense NOVEL OTTHUMG00000064934.1 5568 384 2 ENSG00000227757.3 AP000282.2 chr21 32913649 33071104 - antisense NOVEL OTTHUMG00000065033.2 157456 682 2 ENSG00000228961.1 AP000282.3 chr21 32958888 32960566 + lincRNA NOVEL OTTHUMG00000065034.1 1679 576 2 ENSG00000234818.1 AC092687.5 chr2 10589166 10604830 + antisense NOVEL OTTHUMG00000153036.1 15665 565 4 ENSG00000205927.4 OLIG2 chr21 33025845 33029196 + protein_coding KNOWN OTTHUMG00000065032.3 3352 3352 5 ENSG00000232539.1 LINC00945 chr21 33057829 33064983 + lincRNA NOVEL OTTHUMG00000065060.1 7155 753 5 ENSG00000184221.11 OLIG1 chr21 33070144 33072420 + protein_coding KNOWN OTTHUMG00000065064.2 2277 2277 5 ENSG00000226527.1 AP000289.6 chr21 33111699 33123703 - lincRNA NOVEL OTTHUMG00000065062.1 12005 1361 3 ENSG00000226433.1 AP000290.7 chr21 33156632 33159110 + antisense NOVEL OTTHUMG00000065063.1 2479 449 2 ENSG00000229086.3 LINC01548 chr21 33165470 33170236 - lincRNA KNOWN OTTHUMG00000065061.3 4767 595 4 ENSG00000281214.1 AP000290.1 chr21 33167128 33167262 + miRNA NOVEL NA 135 135 1 ENSG00000159110.18 IFNAR2 chr21 33229901 33265675 + protein_coding KNOWN OTTHUMG00000065127.38 35775 4614 73 ENSG00000249624.7 AP000295.9 chr21 33246774 33283212 + protein_coding NOVEL OTTHUMG00000162031.2 36439 1000 12 ENSG00000223799.1 IL10RB-AS1 chr21 33263873 33266260 - antisense NOVEL OTTHUMG00000065125.1 2388 2228 2 ENSG00000243819.4 RN7SL832P chr2 10690344 10692099 + lincRNA NOVEL OTTHUMG00000185349.1 1756 1756 1 ENSG00000243646.7 IL10RB chr21 33266358 33297234 + protein_coding KNOWN OTTHUMG00000065128.7 30877 2545 29 ENSG00000272659.1 AP000295.10 chr21 33309491 33310181 + lincRNA NOVEL OTTHUMG00000186478.2 691 691 1 ENSG00000142166.11 IFNAR1 chr21 33324477 33359862 + protein_coding KNOWN OTTHUMG00000065126.8 35386 6301 17 ENSG00000226501.2 USF1P1 chr21 33334571 33335096 + processed_pseudogene KNOWN OTTHUMG00000065124.1 526 526 1 ENSG00000159128.13 IFNGR2 chr21 33402896 33479348 + protein_coding KNOWN OTTHUMG00000065188.5 76453 2960 39 ENSG00000142188.15 TMEM50B chr21 33432485 33480011 - protein_coding KNOWN OTTHUMG00000065286.11 47527 4495 49 ENSG00000215088.3 RPS5P3 chr21 33481580 33482195 - processed_pseudogene KNOWN OTTHUMG00000065532.1 616 616 1 ENSG00000231355.1 AP000302.58 chr21 33482499 33484258 - antisense NOVEL OTTHUMG00000065530.1 1760 666 3 ENSG00000177692.10 DNAJC28 chr21 33485530 33491720 - protein_coding KNOWN OTTHUMG00000065531.6 6191 2484 9 ENSG00000159131.15 GART chr21 33503931 33543491 - protein_coding KNOWN OTTHUMG00000065628.24 39561 7751 155 ENSG00000277446.1 Metazoa_SRP chr2 10691538 10691831 + misc_RNA NOVEL NA 294 294 1 ENSG00000233956.1 BTF3P6 chr21 33518610 33519108 - processed_pseudogene KNOWN OTTHUMG00000065805.2 499 499 1 ENSG00000159140.16 SON chr21 33542618 33577481 + protein_coding KNOWN OTTHUMG00000065806.6 34864 13172 124 ENSG00000275224.1 MIR6501 chr21 33550662 33550728 + miRNA KNOWN NA 67 67 1 ENSG00000159147.16 DONSON chr21 33559542 33588708 - protein_coding KNOWN OTTHUMG00000065904.8 29167 3513 93 ENSG00000249209.2 AP000304.12 chr21 33584687 33931607 - protein_coding NOVEL OTTHUMG00000162259.2 346921 1078 8 ENSG00000205758.10 CRYZL1 chr21 33589341 33643926 - protein_coding KNOWN OTTHUMG00000065954.11 54586 6177 168 ENSG00000205726.12 ITSN1 chr21 33642400 33899861 + protein_coding KNOWN OTTHUMG00000065284.32 257462 21748 421 ENSG00000241837.5 ATP5O chr21 33903453 33915980 - protein_coding KNOWN OTTHUMG00000065186.10 12528 3336 45 ENSG00000237945.6 LINC00649 chr21 33915534 33977691 + antisense KNOWN OTTHUMG00000065819.10 62158 14336 56 ENSG00000244294.3 RN7SL740P chr21 33918995 33919338 - misc_RNA KNOWN NA 344 344 1 ENSG00000236162.1 AC092687.3 chr2 10717773 10720952 + lincRNA NOVEL OTTHUMG00000151707.1 3180 568 5 ENSG00000273102.1 AP000569.9 chr21 33967101 33968573 - lincRNA NOVEL OTTHUMG00000186318.1 1473 591 2 ENSG00000243927.4 MRPS6 chr21 34073224 34143034 + protein_coding KNOWN OTTHUMG00000065820.2 69811 4299 18 ENSG00000198743.5 SLC5A3 chr21 34073570 34106260 + protein_coding KNOWN OTTHUMG00000065821.2 32691 11574 2 ENSG00000272657.1 AP000320.7 chr21 34073592 34360033 + processed_transcript NOVEL OTTHUMG00000185873.1 286442 641 6 ENSG00000224598.1 RPS5P2 chr21 34135432 34136071 - processed_pseudogene KNOWN OTTHUMG00000065822.1 640 640 1 ENSG00000227456.6 LINC00310 chr21 34157724 34190244 + lincRNA KNOWN OTTHUMG00000086190.7 32521 3280 21 ENSG00000214955.5 AP000318.2 chr21 34205055 34325034 + lincRNA NOVEL OTTHUMG00000086188.1 119980 805 5 ENSG00000159197.3 KCNE2 chr21 34364024 34371389 + protein_coding KNOWN OTTHUMG00000086189.2 7366 1051 2 ENSG00000225555.1 AP000320.6 chr21 34370802 34375348 - antisense NOVEL OTTHUMG00000086192.1 4547 471 2 ENSG00000205670.9 SMIM11 chr21 34375480 34407866 + protein_coding KNOWN OTTHUMG00000086193.3 32387 4200 30 ENSG00000143882.8 ATP6V1C2 chr2 10721649 10785110 + protein_coding KNOWN OTTHUMG00000090459.2 63462 3324 30 ENSG00000222018.1 C21orf140 chr21 34400317 34401072 - protein_coding PUTATIVE OTTHUMG00000154291.1 756 756 1 ENSG00000273104.1 CMP21-97G8.1 chr21 34412200 34412587 + lincRNA NOVEL OTTHUMG00000186481.1 388 388 1 ENSG00000243627.4 AP000322.53 chr21 34418715 34423966 - protein_coding PUTATIVE OTTHUMG00000153030.3 5252 1050 2 ENSG00000272958.1 CMP21-97G8.2 chr21 34425508 34426017 + lincRNA NOVEL OTTHUMG00000186482.1 510 510 1 ENSG00000180509.10 KCNE1 chr21 34446688 34512275 - protein_coding KNOWN OTTHUMG00000086236.2 65588 5713 25 ENSG00000221398.1 SNORA11 chr21 34456110 34456237 - snoRNA NOVEL NA 128 128 1 ENSG00000159200.16 RCAN1 chr21 34513142 34615142 - protein_coding KNOWN OTTHUMG00000086235.4 102001 6990 49 ENSG00000159212.11 CLIC6 chr21 34669389 34718227 + protein_coding KNOWN OTTHUMG00000086237.1 48839 3860 13 ENSG00000230978.1 LINC00160 chr21 34723807 34737181 - lincRNA KNOWN OTTHUMG00000086234.1 13375 693 6 ENSG00000234380.1 LINC01426 chr21 34745757 34784886 + antisense NOVEL OTTHUMG00000086233.1 39130 3219 5 ENSG00000239053.1 RNU7-138P chr2 10744186 10744249 + snRNA KNOWN NA 64 64 1 ENSG00000159216.17 RUNX1 chr21 34787801 36004667 - protein_coding KNOWN OTTHUMG00000086299.9 1216867 15574 83 ENSG00000234703.1 AF015262.2 chr21 35136638 35139222 + lincRNA NOVEL OTTHUMG00000086303.1 2585 698 2 ENSG00000223671.2 RPL34P3 chr21 35472095 35472432 - processed_pseudogene KNOWN OTTHUMG00000086465.2 338 338 1 ENSG00000231300.1 EZH2P1 chr21 35599732 35600022 - processed_pseudogene KNOWN OTTHUMG00000086464.1 291 291 1 ENSG00000230794.1 AF015720.3 chr21 35713139 35732942 - lincRNA NOVEL OTTHUMG00000086462.1 19804 349 2 ENSG00000211590.1 MIR802 chr21 35720715 35720808 + miRNA KNOWN NA 94 94 1 ENSG00000229761.1 RPS20P1 chr21 35724747 35725100 - processed_pseudogene KNOWN OTTHUMG00000086461.1 354 354 1 ENSG00000234008.5 PPP1R2P2 chr21 35887195 35887807 + processed_pseudogene KNOWN OTTHUMG00000086466.1 613 613 1 ENSG00000280170.1 FKSG68 chr21 35898055 35898429 - protein_coding KNOWN NA 375 375 1 ENSG00000231106.2 LINC01436 chr21 36005338 36007838 + lincRNA NOVEL OTTHUMG00000086463.2 2501 1048 2 ENSG00000272275.1 RP11-791G15.2 chr2 10767875 10770058 - lincRNA NOVEL OTTHUMG00000185558.1 2184 393 3 ENSG00000214914.3 RPL23AP3 chr21 36016079 36016546 - processed_pseudogene KNOWN OTTHUMG00000086467.1 468 468 1 ENSG00000185917.12 SETD4 chr21 36034541 36079389 - protein_coding KNOWN OTTHUMG00000086483.2 44849 7312 120 ENSG00000189089.5 RIMKLBP1 chr21 36050214 36051377 + processed_pseudogene KNOWN OTTHUMG00000086605.2 1164 1164 1 ENSG00000236677.1 AP000688.11 chr21 36060432 36064408 + antisense NOVEL OTTHUMG00000086615.1 3977 446 3 ENSG00000200213.1 RNU6-992P chr21 36066545 36066652 + snRNA KNOWN NA 108 108 1 ENSG00000230212.5 AP000688.14 chr21 36069642 36126640 - sense_intronic NOVEL OTTHUMG00000086616.3 56999 1293 6 ENSG00000159228.11 CBR1 chr21 36069941 36073166 + protein_coding KNOWN OTTHUMG00000086618.2 3226 2450 14 ENSG00000236119.1 AP000688.15 chr21 36082859 36090414 + lincRNA NOVEL OTTHUMG00000086614.1 7556 348 2 ENSG00000233393.1 AP000688.29 chr21 36104881 36109690 + lincRNA NOVEL OTTHUMG00000153500.1 4810 2336 2 ENSG00000226054.2 MEMO1P1 chr21 36130489 36131376 + processed_pseudogene KNOWN OTTHUMG00000086608.1 888 888 1 ENSG00000143870.11 PDIA6 chr2 10783391 10837977 - protein_coding KNOWN OTTHUMG00000090479.4 54587 4101 94 ENSG00000236830.5 CBR3-AS1 chr21 36131767 36175815 - processed_transcript NOVEL OTTHUMG00000086607.4 44049 8459 57 ENSG00000214889.3 RPS9P1 chr21 36132450 36133032 + processed_pseudogene KNOWN OTTHUMG00000086609.1 583 583 1 ENSG00000159231.5 CBR3 chr21 36134912 36146566 + protein_coding KNOWN OTTHUMG00000086617.1 11655 1169 3 ENSG00000142197.11 DOPEY2 chr21 36156782 36294274 + protein_coding KNOWN OTTHUMG00000086619.3 137493 9030 51 ENSG00000228149.1 RPL3P1 chr21 36168970 36170180 - processed_pseudogene KNOWN OTTHUMG00000086610.1 1211 1211 1 ENSG00000214867.3 SRSF9P1 chr21 36295173 36295702 - processed_pseudogene KNOWN OTTHUMG00000086621.1 530 530 1 ENSG00000273199.1 AP000692.10 chr21 36319792 36320670 - antisense NOVEL OTTHUMG00000186487.1 879 879 1 ENSG00000159256.11 MORC3 chr21 36320189 36386148 + protein_coding KNOWN OTTHUMG00000086620.4 65960 6408 83 ENSG00000228107.1 AP000692.9 chr21 36360630 36362040 + sense_overlapping NOVEL OTTHUMG00000086612.1 1411 596 2 ENSG00000159259.7 CHAF1B chr21 36385378 36419015 + protein_coding KNOWN OTTHUMG00000086606.3 33638 5118 24 ENSG00000233421.4 RP5-875O13.1 chr1 16533886 16536172 - lincRNA NOVEL OTTHUMG00000002488.1 2287 2068 4 ENSG00000238962.1 RNU7-176P chr2 10815485 10815546 - snRNA KNOWN NA 62 62 1 ENSG00000224421.1 ATP5J2LP chr21 36388878 36389112 - processed_pseudogene KNOWN OTTHUMG00000086613.1 235 235 1 ENSG00000230479.1 AP000695.6 chr21 36430360 36481070 + antisense NOVEL OTTHUMG00000086643.1 50711 893 2 ENSG00000233818.1 AP000695.4 chr21 36445731 36532408 + antisense NOVEL OTTHUMG00000086611.2 86678 1178 4 ENSG00000159261.9 CLDN14 chr21 36460621 36576569 - protein_coding KNOWN OTTHUMG00000086638.1 115949 2853 15 ENSG00000279365.1 KB-176G8.1 chr21 36485867 36487760 + TEC KNOWN OTTHUMG00000187462.1 1894 1894 1 ENSG00000223741.1 PSMD4P1 chr21 36485983 36487411 - processed_pseudogene KNOWN OTTHUMG00000086641.1 1429 1109 2 ENSG00000231324.1 AP000696.2 chr21 36632681 36637033 - lincRNA NOVEL OTTHUMG00000086644.1 4353 1133 2 ENSG00000224269.1 AP000697.6 chr21 36698773 36701564 - antisense NOVEL OTTHUMG00000086642.1 2792 339 2 ENSG00000159263.14 SIM2 chr21 36699133 36749917 + protein_coding KNOWN OTTHUMG00000086637.3 50785 7652 35 ENSG00000159267.13 HLCS chr21 36750888 36990236 - protein_coding KNOWN OTTHUMG00000086636.2 239349 7889 51 ENSG00000232056.1 AC092687.4 chr2 10847577 10854955 + lincRNA NOVEL OTTHUMG00000151708.2 7379 389 3 ENSG00000237646.1 HLCS-IT1 chr21 36803984 36806284 - sense_intronic NOVEL OTTHUMG00000086640.1 2301 531 2 ENSG00000199806.1 RNA5SP491 chr21 36851911 36852028 + rRNA KNOWN NA 118 118 1 ENSG00000270652.1 DPRXP5 chr21 36943267 36944125 + processed_pseudogene KNOWN OTTHUMG00000185257.1 859 539 2 ENSG00000224790.1 AP000704.5 chr21 36966512 36971828 + lincRNA NOVEL OTTHUMG00000086635.2 5317 438 4 ENSG00000207416.1 Y_RNA chr21 36986739 36986851 - misc_RNA NOVEL NA 113 113 1 ENSG00000215734.3 MRPL20P1 chr21 36994643 36995075 + processed_pseudogene KNOWN OTTHUMG00000086645.1 433 433 1 ENSG00000183145.7 RIPPLY3 chr21 37006150 37019659 + protein_coding KNOWN OTTHUMG00000086639.1 13510 2319 11 ENSG00000212136.1 RNU6-696P chr21 37045530 37045636 + snRNA KNOWN NA 107 107 1 ENSG00000185808.12 PIGP chr21 37059170 37073170 - protein_coding KNOWN OTTHUMG00000086653.7 14001 7923 33 ENSG00000182670.12 TTC3 chr21 37073226 37203112 + protein_coding KNOWN OTTHUMG00000086654.6 129887 15883 475 ENSG00000270488.1 RP11-245G13.1 chr2 10874291 10874567 - processed_pseudogene KNOWN OTTHUMG00000184433.1 277 277 1 ENSG00000270116.1 AP001429.1 chr21 37100814 37101343 + sense_intronic NOVEL OTTHUMG00000183922.1 530 530 1 ENSG00000228677.1 TTC3-AS1 chr21 37187666 37193926 - antisense NOVEL OTTHUMG00000086658.1 6261 1097 2 ENSG00000230366.8 DSCR9 chr21 37208503 37221736 + lincRNA KNOWN OTTHUMG00000086655.2 13234 1901 21 ENSG00000263969.2 RN7SL678P chr21 37215605 37215903 + misc_RNA KNOWN NA 299 299 1 ENSG00000242553.1 AP001432.14 chr21 37221419 37237744 + lincRNA NOVEL OTTHUMG00000086656.1 16326 520 2 ENSG00000157538.12 DSCR3 chr21 37223420 37267919 - protein_coding KNOWN OTTHUMG00000086659.2 44500 9301 65 ENSG00000272948.2 AP001412.1 chr21 37267784 37268497 + antisense NOVEL OTTHUMG00000186494.2 714 714 1 ENSG00000273210.1 AP001437.1 chr21 37365477 37365932 - antisense NOVEL OTTHUMG00000186495.1 456 456 1 ENSG00000157540.18 DYRK1A chr21 37365790 37517450 + protein_coding KNOWN OTTHUMG00000086657.3 151661 10213 64 ENSG00000157542.9 KCNJ6 chr21 37607376 37916446 - protein_coding KNOWN OTTHUMG00000086667.3 309071 19645 4 ENSG00000271952.1 RP11-245G13.2 chr2 10878269 10885118 + lincRNA NOVEL OTTHUMG00000185559.1 6850 461 2 ENSG00000233213.1 KCNJ6-AS1 chr21 37717102 37719569 - sense_intronic NOVEL OTTHUMG00000086669.2 2468 357 2 ENSG00000184029.8 DSCR4 chr21 37951425 38121360 - protein_coding KNOWN OTTHUMG00000086673.3 169936 2054 13 ENSG00000223608.1 DSCR4-IT1 chr21 38006544 38010618 - sense_intronic NOVEL OTTHUMG00000086672.1 4075 424 2 ENSG00000198054.10 DSCR8 chr21 38121451 38188016 + protein_coding KNOWN OTTHUMG00000090610.2 66566 1472 30 ENSG00000157551.16 KCNJ15 chr21 38157034 38307357 + protein_coding KNOWN OTTHUMG00000090609.4 150324 9728 90 ENSG00000270835.1 AP001425.14 chr21 38204544 38205606 - processed_pseudogene KNOWN OTTHUMG00000184885.1 1063 1063 1 ENSG00000233316.3 DSCR10 chr21 38206156 38208644 + sense_intronic KNOWN OTTHUMG00000090611.2 2489 860 4 ENSG00000226012.1 AP001434.2 chr21 38237217 38238201 - lincRNA NOVEL OTTHUMG00000090613.1 985 287 2 ENSG00000231123.1 SPATA20P1 chr21 38238227 38238664 - processed_pseudogene KNOWN OTTHUMG00000090612.1 438 438 1 ENSG00000231231.4 LINC01423 chr21 38323635 38333421 - lincRNA NOVEL OTTHUMG00000090768.1 9787 859 9 ENSG00000162975.4 KCNF1 chr2 10911937 10914225 + protein_coding KNOWN OTTHUMG00000119054.1 2289 2289 1 ENSG00000157554.17 ERG chr21 38380027 38661780 - protein_coding KNOWN OTTHUMG00000090767.3 281754 7588 142 ENSG00000231480.1 SNRPGP13 chr21 38502445 38502621 + processed_pseudogene KNOWN OTTHUMG00000090770.1 177 177 1 ENSG00000223806.6 LINC00114 chr21 38739021 38747460 - lincRNA KNOWN OTTHUMG00000090771.2 8440 1972 15 ENSG00000157557.10 ETS2 chr21 38805307 38824955 + protein_coding KNOWN OTTHUMG00000090769.5 19649 4595 34 ENSG00000229986.1 AP001042.1 chr21 38846247 38848644 + lincRNA NOVEL OTTHUMG00000086700.1 2398 487 2 ENSG00000205622.8 AF064858.6 chr21 38863676 38956467 - lincRNA NOVEL OTTHUMG00000066036.7 92792 7860 27 ENSG00000229925.1 AP001043.1 chr21 38888772 38903905 + lincRNA NOVEL OTTHUMG00000086701.1 15134 288 2 ENSG00000272015.1 SNORA62 chr21 38894785 38894867 + snoRNA NOVEL NA 83 83 1 ENSG00000227721.1 RPSAP64 chr21 38894917 38895252 + processed_pseudogene KNOWN OTTHUMG00000086703.1 336 336 1 ENSG00000232837.1 AF064858.7 chr21 38974429 38977774 - lincRNA NOVEL OTTHUMG00000066032.1 3346 1598 3 ENSG00000226080.1 RP11-345J13.1 chr2 11102142 11102997 + processed_pseudogene KNOWN OTTHUMG00000157022.1 856 856 1 ENSG00000235888.1 AF064858.8 chr21 38988707 39006153 - lincRNA NOVEL OTTHUMG00000066035.2 17447 1412 3 ENSG00000237721.1 AF064858.11 chr21 39006648 39011329 - lincRNA NOVEL OTTHUMG00000086702.1 4682 509 3 ENSG00000237609.1 AF064858.10 chr21 39028536 39029128 - lincRNA NOVEL OTTHUMG00000066033.2 593 292 2 ENSG00000228861.5 RPL23AP12 chr21 39127568 39128040 + processed_pseudogene KNOWN OTTHUMG00000066031.2 473 473 1 ENSG00000235701.1 PCBP2P1 chr21 39171130 39172106 - processed_pseudogene KNOWN OTTHUMG00000066029.2 977 977 1 ENSG00000276873.1 uc_338 chr21 39171462 39171560 - misc_RNA NOVEL NA 99 99 1 ENSG00000183527.10 PSMG1 chr21 39174769 39183851 - protein_coding KNOWN OTTHUMG00000066034.4 9083 2515 29 ENSG00000185658.12 BRWD1 chr21 39184176 39321559 - protein_coding KNOWN OTTHUMG00000066030.7 137384 19794 260 ENSG00000272991.1 AF129408.17 chr21 39184469 39184899 + antisense NOVEL OTTHUMG00000186501.1 431 431 1 ENSG00000232608.1 TIMM9P2 chr21 39216624 39217506 + processed_pseudogene KNOWN OTTHUMG00000066153.1 883 266 2 ENSG00000145063.13 AC062028.1 chr2 11105317 11132821 - lincRNA NOVEL OTTHUMG00000119056.4 27505 2705 23 ENSG00000237373.1 BRWD1-IT1 chr21 39217093 39219805 - sense_overlapping NOVEL OTTHUMG00000133692.1 2713 489 2 ENSG00000229623.1 METTL21AP1 chr21 39235386 39236020 - processed_pseudogene KNOWN OTTHUMG00000066177.1 635 635 1 ENSG00000255568.3 BRWD1-AS2 chr21 39313935 39314962 + antisense KNOWN OTTHUMG00000066154.5 1028 1028 1 ENSG00000238141.2 BRWD1-AS1 chr21 39315707 39323218 + antisense NOVEL OTTHUMG00000133705.2 7512 691 3 ENSG00000205581.9 HMGN1 chr21 39342315 39349647 - protein_coding KNOWN OTTHUMG00000066178.4 7333 5102 117 ENSG00000252915.1 Y_RNA chr21 39344537 39344628 + misc_RNA NOVEL NA 92 92 1 ENSG00000227406.1 RNF6P1 chr21 39373763 39377066 - processed_pseudogene KNOWN OTTHUMG00000102163.1 3304 1784 5 ENSG00000182093.13 WRB chr21 39380244 39428528 + protein_coding KNOWN OTTHUMG00000066250.15 48285 5558 51 ENSG00000157578.12 LCA5L chr21 39405844 39445805 - protein_coding KNOWN OTTHUMG00000066280.6 39962 5841 117 ENSG00000185437.12 SH3BGR chr21 39445855 39515506 + protein_coding KNOWN OTTHUMG00000074113.12 69652 1495 52 ENSG00000150873.10 C2orf50 chr2 11133053 11146790 + protein_coding KNOWN OTTHUMG00000119057.2 13738 2938 7 ENSG00000275523.1 MIR6508 chr21 39447010 39447069 + miRNA KNOWN NA 60 60 1 ENSG00000235808.1 MYL6P2 chr21 39488327 39488760 + processed_pseudogene KNOWN OTTHUMG00000086714.1 434 434 1 ENSG00000228349.1 RPS26P4 chr21 39491544 39491898 - processed_pseudogene KNOWN OTTHUMG00000086713.1 355 355 1 ENSG00000235012.1 AF121897.4 chr21 39525583 39529855 + processed_pseudogene KNOWN OTTHUMG00000086715.2 4273 3980 2 ENSG00000183778.16 B3GALT5 chr21 39556442 39673137 + protein_coding KNOWN OTTHUMG00000086725.3 116696 14319 18 ENSG00000184809.11 B3GALT5-AS1 chr21 39597147 39612821 - antisense KNOWN OTTHUMG00000086722.1 15675 2516 11 ENSG00000225330.1 AF064860.5 chr21 39630271 39726085 + sense_overlapping NOVEL OTTHUMG00000086721.1 95815 544 3 ENSG00000231713.2 AF064860.7 chr21 39727755 39730680 + lincRNA NOVEL OTTHUMG00000086723.2 2926 1786 5 ENSG00000183067.5 IGSF5 chr21 39745407 39802096 + protein_coding KNOWN OTTHUMG00000086724.1 56690 2650 17 ENSG00000183036.9 PCP4 chr21 39867317 39929397 + protein_coding KNOWN OTTHUMG00000086731.3 62081 1106 14 ENSG00000162976.11 PQLC3 chr2 11155198 11178874 + protein_coding KNOWN OTTHUMG00000119055.4 23677 2275 48 ENSG00000171587.13 DSCAM chr21 40010999 40847139 - protein_coding KNOWN OTTHUMG00000086732.1 836141 8577 92 ENSG00000263973.1 MIR4760 chr21 40212352 40212431 - miRNA KNOWN NA 80 80 1 ENSG00000235123.4 DSCAM-AS1 chr21 40383083 40385358 + antisense NOVEL OTTHUMG00000086733.1 2276 1769 10 ENSG00000207147.1 SNORA51 chr21 40513144 40513279 + snoRNA NOVEL NA 136 136 1 ENSG00000233756.4 DSCAM-IT1 chr21 40615378 40630767 - sense_intronic NOVEL OTTHUMG00000086730.2 15390 826 8 ENSG00000230859.1 YRDCP3 chr21 40863994 40864473 + processed_pseudogene KNOWN OTTHUMG00000154985.1 480 480 1 ENSG00000226496.2 LINC00323 chr21 41141493 41148133 - antisense KNOWN OTTHUMG00000086741.2 6641 2439 7 ENSG00000263681.1 MIR3197 chr21 41167557 41167629 + miRNA KNOWN NA 73 73 1 ENSG00000182240.14 BACE2 chr21 41167801 41282518 + protein_coding KNOWN OTTHUMG00000086742.2 114718 9619 65 ENSG00000280109.1 PLAC4 chr21 41175231 41185239 - TEC KNOWN OTTHUMG00000086743.1 10009 10009 2 ENSG00000134318.12 ROCK2 chr2 11179761 11348330 - protein_coding KNOWN OTTHUMG00000149916.6 168570 10145 130 ENSG00000225745.7 PLAC4 chr21 41176322 41186788 - antisense NOVEL OTTHUMG00000086744.2 10467 1224 10 ENSG00000224388.1 BACE2-IT1 chr21 41180097 41180626 + antisense NOVEL OTTHUMG00000086745.1 530 382 2 ENSG00000183844.15 FAM3B chr21 41304212 41357431 + protein_coding KNOWN OTTHUMG00000086752.2 53220 3599 46 ENSG00000183486.11 MX2 chr21 41361943 41409390 + protein_coding KNOWN OTTHUMG00000086753.4 47448 13047 62 ENSG00000157601.12 MX1 chr21 41420304 41459214 + protein_coding KNOWN OTTHUMG00000086755.5 38911 8616 132 ENSG00000228318.3 AP001610.5 chr21 41441056 41445708 - antisense NOVEL OTTHUMG00000086754.3 4653 1116 3 ENSG00000184012.10 TMPRSS2 chr21 41464551 41531116 - protein_coding KNOWN OTTHUMG00000086762.5 66566 6117 80 ENSG00000207503.1 SNORA32 chr21 41539206 41539326 + snoRNA NOVEL NA 121 121 1 ENSG00000232806.1 AP001610.9 chr21 41559125 41562958 - lincRNA NOVEL OTTHUMG00000086761.1 3834 422 3 ENSG00000223400.1 AP006748.1 chr21 41576135 41581319 - lincRNA NOVEL OTTHUMG00000086763.1 5185 346 2 ENSG00000277344.1 U1 chr1 16534081 16534224 - snRNA NOVEL NA 144 144 1 ENSG00000207267.1 RNU6-1081P chr2 11233988 11234094 + snRNA KNOWN NA 107 107 1 ENSG00000227702.1 LINC00111 chr21 41679181 41697336 + lincRNA KNOWN OTTHUMG00000086772.1 18156 575 3 ENSG00000236384.6 LINC00479 chr21 41711520 41715775 - lincRNA KNOWN OTTHUMG00000086773.5 4256 2114 20 ENSG00000232401.1 LINC00112 chr21 41716436 41717580 + antisense KNOWN OTTHUMG00000086769.1 1145 522 3 ENSG00000183421.10 RIPK4 chr21 41739369 41767106 - protein_coding KNOWN OTTHUMG00000086770.1 27738 4033 17 ENSG00000236883.1 AP001615.9 chr21 41739373 41741308 + antisense NOVEL OTTHUMG00000086771.1 1936 461 2 ENSG00000275166.1 MIR6814 chr21 41746772 41746841 - miRNA KNOWN NA 70 70 1 ENSG00000141956.12 PRDM15 chr21 41798225 41879482 - protein_coding KNOWN OTTHUMG00000086781.7 81258 13004 252 ENSG00000236545.1 AP001619.3 chr21 41870633 41872054 + antisense NOVEL OTTHUMG00000086778.1 1422 587 2 ENSG00000227698.1 AP001619.2 chr21 41874756 41877613 - sense_intronic NOVEL OTTHUMG00000086780.1 2858 447 3 ENSG00000251778.1 SNORA3 chr21 41882205 41882300 + snoRNA NOVEL NA 96 96 1 ENSG00000230154.1 AC018463.4 chr2 11308025 11308941 + processed_pseudogene KNOWN OTTHUMG00000151820.3 917 917 1 ENSG00000157617.15 C2CD2 chr21 41885112 41953890 - protein_coding KNOWN OTTHUMG00000086779.4 68779 8602 66 ENSG00000275439.1 AP001619.1 chr21 41922177 41922274 - miRNA NOVEL NA 98 98 1 ENSG00000173276.12 ZBTB21 chr21 41986831 42010387 - protein_coding KNOWN OTTHUMG00000086789.1 23557 8062 26 ENSG00000237232.6 ZNF295-AS1 chr21 42009194 42024924 + lincRNA KNOWN OTTHUMG00000086787.2 15731 1363 6 ENSG00000177398.17 UMODL1 chr21 42062959 42143453 + protein_coding KNOWN OTTHUMG00000086788.3 80495 7278 151 ENSG00000184385.2 UMODL1-AS1 chr21 42102134 42108534 - sense_overlapping KNOWN OTTHUMG00000086790.2 6401 2141 2 ENSG00000160179.17 ABCG1 chr21 42199689 42297244 + protein_coding KNOWN OTTHUMG00000086791.3 97556 6121 136 ENSG00000223262.1 RNA5SP492 chr21 42221173 42221286 + rRNA KNOWN NA 114 114 1 ENSG00000160180.15 TFF3 chr21 42311667 42315651 - protein_coding KNOWN OTTHUMG00000086798.4 3985 1168 12 ENSG00000160181.7 TFF2 chr21 42346357 42351128 - protein_coding KNOWN OTTHUMG00000086797.1 4772 830 13 ENSG00000281867.1 AC018463.1 chr2 11322048 11322182 - miRNA NOVEL NA 135 135 1 ENSG00000160182.2 TFF1 chr21 42362282 42366594 - protein_coding KNOWN OTTHUMG00000086799.1 4313 551 3 ENSG00000160183.12 TMPRSS3 chr21 42371890 42396846 - protein_coding KNOWN OTTHUMG00000086796.3 24957 5660 75 ENSG00000160185.12 UBASH3A chr21 42403899 42447681 + protein_coding KNOWN OTTHUMG00000086805.1 43783 3091 55 ENSG00000252619.1 RNU6-1149P chr21 42417497 42417593 - snRNA KNOWN NA 97 97 1 ENSG00000160188.8 RSPH1 chr21 42472486 42496354 - protein_coding KNOWN OTTHUMG00000086804.2 23869 2988 25 ENSG00000160190.12 SLC37A1 chr21 42496008 42581440 + protein_coding KNOWN OTTHUMG00000086803.5 85433 6814 63 ENSG00000239930.2 AP001625.4 chr21 42496539 42497443 + sense_intronic NOVEL OTTHUMG00000086811.1 905 449 3 ENSG00000231867.1 AP001625.5 chr21 42508624 42509661 + sense_intronic NOVEL OTTHUMG00000086812.1 1038 463 4 ENSG00000235772.1 AP001625.6 chr21 42560374 42561934 - antisense NOVEL OTTHUMG00000086815.1 1561 575 2 ENSG00000225431.1 AP001626.1 chr21 42599280 42615058 - lincRNA NOVEL OTTHUMG00000086813.1 15779 1775 2 ENSG00000226961.3 AC018463.5 chr2 11351627 11352118 + processed_pseudogene KNOWN OTTHUMG00000151817.3 492 492 1 ENSG00000235023.1 AP001626.2 chr21 42648271 42651244 - antisense NOVEL OTTHUMG00000086814.1 2974 2854 2 ENSG00000160191.16 PDE9A chr21 42653636 42775509 + protein_coding KNOWN OTTHUMG00000086825.1 121874 5266 422 ENSG00000225731.1 AP001627.1 chr21 42733594 42741758 - antisense NOVEL OTTHUMG00000153501.1 8165 1754 2 ENSG00000233754.1 AP001628.7 chr21 42781074 42782233 - lincRNA NOVEL OTTHUMG00000086827.1 1160 788 2 ENSG00000225218.1 AP001628.6 chr21 42831040 42836477 - lincRNA NOVEL OTTHUMG00000086824.1 5438 285 3 ENSG00000160193.10 WDR4 chr21 42843094 42879568 - protein_coding KNOWN OTTHUMG00000086826.1 36475 2738 65 ENSG00000160194.16 NDUFV3 chr21 42879644 42913304 + protein_coding KNOWN OTTHUMG00000086823.3 33661 6345 15 ENSG00000233056.2 ERVH48-1 chr21 42916803 42925646 - lincRNA NOVEL OTTHUMG00000086835.1 8844 2842 3 ENSG00000264580.1 MIR5692B chr21 42950928 42951014 - miRNA KNOWN NA 87 87 1 ENSG00000224100.1 AP001630.5 chr21 42964639 42965363 - antisense NOVEL OTTHUMG00000086837.1 725 437 2 ENSG00000230952.1 AC099344.2 chr2 11357515 11365636 - lincRNA NOVEL OTTHUMG00000151821.1 8122 1061 2 ENSG00000160199.13 PKNOX1 chr21 42974510 43033931 + protein_coding KNOWN OTTHUMG00000086833.5 59422 7621 59 ENSG00000160200.16 CBS chr21 43053191 43076943 - protein_coding KNOWN OTTHUMG00000086834.7 23753 6786 139 ENSG00000160201.10 U2AF1 chr21 43092956 43107587 - protein_coding KNOWN OTTHUMG00000086836.2 14632 11112 70 ENSG00000232777.1 MRPL51P2 chr21 43115334 43115709 - processed_pseudogene KNOWN OTTHUMG00000086843.1 376 376 1 ENSG00000264009.1 AP001631.1 chr21 43127520 43127619 + miRNA NOVEL NA 100 100 1 ENSG00000236663.1 AP001631.9 chr21 43140523 43141092 - antisense NOVEL OTTHUMG00000086845.1 570 422 2 ENSG00000228120.2 AP001631.10 chr21 43159066 43162277 - lincRNA NOVEL OTTHUMG00000086844.1 3212 1052 3 ENSG00000160202.6 CRYAA chr21 43169008 43172805 + protein_coding KNOWN OTTHUMG00000086842.1 3798 1821 15 ENSG00000237864.1 LINC00322 chr21 43322417 43332039 - lincRNA NOVEL OTTHUMG00000086864.2 9623 699 3 ENSG00000237989.1 AP001046.5 chr21 43358147 43362349 - lincRNA NOVEL OTTHUMG00000086865.1 4203 2798 2 ENSG00000231403.1 AC099344.3 chr2 11388023 11390367 - lincRNA NOVEL OTTHUMG00000151819.1 2345 626 3 ENSG00000225637.1 AP001046.6 chr21 43363332 43366566 + lincRNA NOVEL OTTHUMG00000086868.1 3235 2816 2 ENSG00000142178.7 SIK1 chr21 43414515 43427128 - protein_coding KNOWN OTTHUMG00000086874.1 12614 4886 17 ENSG00000188660.3 LINC00319 chr21 43446601 43453893 + lincRNA KNOWN OTTHUMG00000086866.1 7293 4222 7 ENSG00000185186.7 LINC00313 chr21 43462094 43479534 - lincRNA KNOWN OTTHUMG00000086867.1 17441 2303 22 ENSG00000223975.1 AP001048.4 chr21 43465309 43467298 + lincRNA NOVEL OTTHUMG00000086871.1 1990 280 2 ENSG00000160207.7 HSF2BP chr21 43529192 43659493 - protein_coding KNOWN OTTHUMG00000086863.1 130302 1908 16 ENSG00000214326.2 RPL31P1 chr21 43551229 43551600 + processed_pseudogene KNOWN OTTHUMG00000086873.1 372 372 1 ENSG00000234289.5 H2BFS chr21 43565189 43565648 + protein_coding KNOWN OTTHUMG00000086869.3 460 460 1 ENSG00000278433.1 MIR6070 chr21 43609887 43609989 - miRNA KNOWN NA 103 103 1 ENSG00000160208.12 RRP1B chr21 43659548 43696079 + protein_coding KNOWN OTTHUMG00000086872.3 36532 5762 21 ENSG00000224177.5 LINC00570 chr2 11393981 11403077 + lincRNA NOVEL OTTHUMG00000151818.2 9097 1650 12 ENSG00000160209.17 PDXK chr21 43719094 43762307 + protein_coding KNOWN OTTHUMG00000086870.4 43214 11912 122 ENSG00000281420.1 AP001052.1 chr21 43748365 43748468 - pseudogene NOVEL NA 104 99 2 ENSG00000160213.5 CSTB chr21 43772512 43776445 - protein_coding KNOWN OTTHUMG00000086886.3 3934 2490 5 ENSG00000234030.1 TMEM97P1 chr21 43783123 43783573 + processed_pseudogene KNOWN OTTHUMG00000154997.1 451 451 1 ENSG00000160214.11 RRP1 chr21 43789513 43805293 + protein_coding KNOWN OTTHUMG00000086884.2 15781 4251 51 ENSG00000215458.7 AATBC chr21 43805758 43812567 - antisense NOVEL OTTHUMG00000086882.1 6810 4874 8 ENSG00000226543.3 MYL6P1 chr21 43855890 43856342 - processed_pseudogene KNOWN OTTHUMG00000086885.1 453 453 1 ENSG00000160216.17 AGPAT3 chr21 43865186 43986536 + protein_coding KNOWN OTTHUMG00000086892.12 121351 11296 113 ENSG00000199598.1 RNU6-859P chr21 43919795 43919901 - snRNA KNOWN NA 107 107 1 ENSG00000252606.1 RNU6-1150P chr21 43996322 43996420 - snRNA KNOWN NA 99 99 1 ENSG00000169016.15 E2F6 chr2 11444375 11466177 - protein_coding KNOWN OTTHUMG00000090565.5 21803 4067 76 ENSG00000160218.11 TRAPPC10 chr21 44012319 44106552 + protein_coding KNOWN OTTHUMG00000086894.3 94234 11941 91 ENSG00000213440.2 H2AFZP1 chr21 44046347 44047041 - processed_pseudogene KNOWN OTTHUMG00000086895.1 695 395 2 ENSG00000241945.6 PWP2 chr21 44107290 44131181 + protein_coding KNOWN OTTHUMG00000086893.4 23892 6922 46 ENSG00000160221.15 C21orf33 chr21 44133605 44145723 + protein_coding KNOWN OTTHUMG00000086916.6 12119 3108 58 ENSG00000225331.1 AP001055.6 chr21 44158740 44160076 - lincRNA NOVEL OTTHUMG00000086913.1 1337 867 5 ENSG00000237604.1 AP001056.1 chr21 44175489 44176453 + lincRNA NOVEL OTTHUMG00000086912.1 965 821 2 ENSG00000232124.1 AP001057.1 chr21 44201290 44202696 + antisense NOVEL OTTHUMG00000086911.1 1407 799 2 ENSG00000232698.1 AP001058.3 chr21 44206525 44207399 - lincRNA NOVEL OTTHUMG00000086915.1 875 463 2 ENSG00000160223.15 ICOSLG chr21 44222991 44240966 - protein_coding KNOWN OTTHUMG00000086920.1 17976 8110 26 ENSG00000278158.1 AP001059.6 chr21 44241847 44242081 + lincRNA NOVEL OTTHUMG00000186518.1 235 235 1 ENSG00000196208.12 GREB1 chr2 11482341 11642788 + protein_coding KNOWN OTTHUMG00000141276.6 160448 12361 126 ENSG00000275799.1 AP001059.7 chr21 44244545 44244993 + lincRNA NOVEL OTTHUMG00000186519.1 449 449 1 ENSG00000142182.7 DNMT3L chr21 44246339 44262216 - protein_coding KNOWN OTTHUMG00000086914.5 15878 1859 37 ENSG00000232010.1 AP001059.5 chr21 44250813 44251520 + antisense NOVEL OTTHUMG00000086917.1 708 523 2 ENSG00000160224.15 AIRE chr21 44285838 44298648 + protein_coding KNOWN OTTHUMG00000086921.4 12811 4678 55 ENSG00000141959.15 PFKL chr21 44300051 44327376 + protein_coding KNOWN OTTHUMG00000086910.2 27326 8926 137 ENSG00000160226.14 C21orf2 chr21 44328944 44339402 - protein_coding KNOWN OTTHUMG00000086909.1 10459 6063 40 ENSG00000241728.4 AP001062.8 chr21 44328944 44330221 - sense_overlapping NOVEL OTTHUMG00000086918.1 1278 846 5 ENSG00000184441.4 AP001062.7 chr21 44331234 44335851 + antisense NOVEL OTTHUMG00000086919.1 4618 4354 2 ENSG00000232969.1 AP001062.9 chr21 44339376 44340470 + antisense NOVEL OTTHUMG00000086923.1 1095 127 2 ENSG00000260256.1 AP001063.1 chr21 44347767 44348295 - lincRNA NOVEL OTTHUMG00000172757.1 529 529 1 ENSG00000201610.1 RNA5SP84 chr2 11517397 11517503 + rRNA KNOWN NA 107 107 1 ENSG00000142185.15 TRPM2 chr21 44350163 44443081 + protein_coding KNOWN OTTHUMG00000040840.4 92919 6705 180 ENSG00000230061.2 TRPM2-AS chr21 44414588 44425272 - antisense NOVEL OTTHUMG00000040845.3 10685 2292 5 ENSG00000266692.1 snoZ6 chr21 44437121 44437175 + snoRNA NOVEL NA 55 55 1 ENSG00000264452.1 snoZ6 chr21 44439035 44439110 + snoRNA NOVEL NA 76 76 1 ENSG00000229356.1 LRRC3-AS1 chr21 44450986 44455284 - antisense NOVEL OTTHUMG00000040842.1 4299 784 4 ENSG00000160233.7 LRRC3 chr21 44455486 44462196 + protein_coding KNOWN OTTHUMG00000040847.4 6711 5869 2 ENSG00000224747.1 AP001065.7 chr21 44469929 44472516 - processed_pseudogene KNOWN OTTHUMG00000040846.1 2588 1113 3 ENSG00000223431.1 MTND6P21 chr21 44472895 44473739 + processed_pseudogene KNOWN OTTHUMG00000040843.1 845 482 2 ENSG00000227999.1 MTND5P1 chr21 44473723 44475097 - processed_pseudogene KNOWN OTTHUMG00000040844.2 1375 1375 1 ENSG00000274225.1 KB-68A7.1 chr21 44477850 44478493 + lincRNA NOVEL OTTHUMG00000186520.1 644 644 1 ENSG00000268991.2 FAM231C chr1 16539066 16539575 + protein_coding KNOWN OTTHUMG00000189241.1 510 510 1 ENSG00000264010.1 MIR4429 chr2 11540605 11540677 - miRNA KNOWN NA 73 73 1 ENSG00000228709.1 AP001065.15 chr21 44485577 44490288 + lincRNA NOVEL OTTHUMG00000086925.1 4712 912 2 ENSG00000277352.1 KB-68A7.2 chr21 44494874 44495519 + lincRNA NOVEL OTTHUMG00000186521.1 646 646 1 ENSG00000175894.13 TSPEAR chr21 44497892 44711580 - protein_coding KNOWN OTTHUMG00000041215.2 213689 4471 46 ENSG00000235890.2 TSPEAR-AS1 chr21 44506807 44516575 + antisense NOVEL OTTHUMG00000041216.3 9769 2355 9 ENSG00000182912.6 TSPEAR-AS2 chr21 44517216 44525952 + antisense KNOWN OTTHUMG00000041217.4 8737 3026 7 ENSG00000215455.4 KRTAP10-1 chr21 44538981 44540195 - protein_coding KNOWN OTTHUMG00000057627.1 1215 1215 1 ENSG00000205445.3 KRTAP10-2 chr21 44550357 44551505 - protein_coding KNOWN OTTHUMG00000057625.1 1149 1149 3 ENSG00000212935.1 KRTAP10-3 chr21 44557790 44558760 - protein_coding KNOWN OTTHUMG00000057628.1 971 971 1 ENSG00000215454.5 KRTAP10-4 chr21 44573729 44575371 + protein_coding KNOWN OTTHUMG00000057641.2 1643 1643 1 ENSG00000241123.1 KRTAP10-5 chr21 44579455 44580604 - protein_coding KNOWN OTTHUMG00000057638.2 1150 1150 1 ENSG00000251718.1 RNU2-13P chr2 11561194 11561306 + snRNA KNOWN NA 113 113 1 ENSG00000188155.9 KRTAP10-6 chr21 44579737 44592505 - protein_coding KNOWN OTTHUMG00000057634.2 12769 1527 3 ENSG00000272804.2 KRTAP10-7 chr21 44600597 44612906 + protein_coding KNOWN OTTHUMG00000188307.1 12310 1935 4 ENSG00000187766.1 KRTAP10-8 chr21 44612079 44612954 + protein_coding KNOWN OTTHUMG00000057632.1 876 876 1 ENSG00000221837.5 KRTAP10-9 chr21 44627123 44628293 + protein_coding KNOWN OTTHUMG00000057637.1 1171 1171 6 ENSG00000221859.2 KRTAP10-10 chr21 44637356 44638455 + protein_coding KNOWN OTTHUMG00000057631.1 1100 1100 1 ENSG00000243489.3 KRTAP10-11 chr21 44646414 44697984 + protein_coding KNOWN OTTHUMG00000057626.1 51571 1474 6 ENSG00000205439.9 KRTAP12-3 chr21 44646657 44658341 + protein_coding KNOWN OTTHUMG00000057630.1 11685 623 4 ENSG00000212933.1 KRTAP12-4 chr21 44654213 44654659 - protein_coding KNOWN OTTHUMG00000057633.1 447 447 1 ENSG00000221864.4 KRTAP12-2 chr21 44666189 44666927 - protein_coding KNOWN OTTHUMG00000057636.1 739 739 1 ENSG00000229880.1 IMMTP1 chr21 44675868 44678086 - processed_pseudogene KNOWN OTTHUMG00000086935.2 2219 2219 1 ENSG00000202248.1 RNA5SP85 chr2 11561661 11561779 - rRNA KNOWN NA 119 119 1 ENSG00000187175.5 KRTAP12-1 chr21 44681576 44682163 - protein_coding KNOWN OTTHUMG00000057639.1 588 588 1 ENSG00000276647.1 RP1-225L15.1 chr21 44686358 44686629 + processed_pseudogene KNOWN OTTHUMG00000187956.1 272 272 1 ENSG00000189169.7 KRTAP10-12 chr21 44697172 44698044 + protein_coding KNOWN OTTHUMG00000057629.1 873 873 4 ENSG00000236382.1 KRTAP10-13P chr21 44702221 44702791 + unprocessed_pseudogene KNOWN OTTHUMG00000057640.1 571 571 1 ENSG00000184787.17 UBE2G2 chr21 44768580 44802019 - protein_coding KNOWN OTTHUMG00000089179.6 33440 7388 60 ENSG00000236519.1 LINC01424 chr21 44802577 44804717 + antisense NOVEL OTTHUMG00000090255.1 2141 1031 2 ENSG00000184900.14 SUMO3 chr21 44805617 44818779 - protein_coding KNOWN OTTHUMG00000090256.4 13163 2732 22 ENSG00000183255.10 PTTG1IP chr21 44849585 44873903 - protein_coding KNOWN OTTHUMG00000090254.1 24319 3537 32 ENSG00000160255.15 ITGB2 chr21 44885953 44931989 - protein_coding KNOWN OTTHUMG00000090257.7 46037 6797 212 ENSG00000227039.5 ITGB2-AS1 chr21 44921051 44929678 + antisense NOVEL OTTHUMG00000090253.2 8628 2438 22 ENSG00000239899.3 RN7SL674P chr2 11584773 11585047 + misc_RNA KNOWN NA 275 275 1 ENSG00000273027.1 LL21NC02-1C16.1 chr21 44929653 44930112 - sense_intronic NOVEL OTTHUMG00000186257.1 460 460 1 ENSG00000183250.10 LINC01547 chr21 44932814 44939913 - lincRNA KNOWN OTTHUMG00000090294.3 7100 2656 10 ENSG00000272825.1 LL21NC02-1C16.2 chr21 44936303 44936954 + antisense NOVEL OTTHUMG00000186258.1 652 652 1 ENSG00000160256.11 FAM207A chr21 44940010 44976989 + protein_coding KNOWN OTTHUMG00000090293.1 36980 1402 24 ENSG00000276529.1 AP001505.10 chr21 44978832 44979274 + lincRNA NOVEL OTTHUMG00000186523.1 443 443 1 ENSG00000234880.1 LINC00163 chr21 44989864 44994086 - lincRNA KNOWN OTTHUMG00000090296.1 4223 2155 4 ENSG00000261706.1 LINC00165 chr21 44994362 44995185 - lincRNA KNOWN OTTHUMG00000172755.1 824 824 1 ENSG00000275874.1 LINC00162 chr21 44999208 45004727 - lincRNA KNOWN OTTHUMG00000090292.2 5520 733 2 ENSG00000235374.2 SSR4P1 chr21 45070952 45074165 - transcribed_processed_pseudogene KNOWN OTTHUMG00000090297.4 3214 2636 4 ENSG00000197381.14 ADARB1 chr21 45073853 45226560 + protein_coding KNOWN OTTHUMG00000090295.4 152708 10012 121 ENSG00000265583.1 AC011994.1 chr2 11607404 11607505 + miRNA NOVEL NA 102 102 1 ENSG00000267857.2 RP5-1023B21.1 chr21 45100487 45101094 - lincRNA NOVEL OTTHUMG00000187465.1 608 608 1 ENSG00000182586.6 LINC00334 chr21 45234340 45258730 + lincRNA KNOWN OTTHUMG00000084875.2 24391 899 6 ENSG00000186866.15 POFUT2 chr21 45263928 45287898 - protein_coding KNOWN OTTHUMG00000084874.5 23971 5862 84 ENSG00000215447.6 BX322557.10 chr21 45288052 45291738 + processed_transcript NOVEL OTTHUMG00000090398.1 3687 1549 6 ENSG00000223768.1 LINC00205 chr21 45293285 45297354 + lincRNA KNOWN OTTHUMG00000090403.2 4070 1391 2 ENSG00000184274.3 LINC00315 chr21 45300245 45305257 - lincRNA KNOWN OTTHUMG00000090409.1 5013 2323 3 ENSG00000229382.1 BX322557.13 chr21 45336707 45338665 + lincRNA NOVEL OTTHUMG00000090402.1 1959 379 2 ENSG00000237664.1 LINC00316 chr21 45338590 45341990 - lincRNA KNOWN OTTHUMG00000090404.1 3401 455 2 ENSG00000228930.1 MTCO1P3 chr21 45376191 45376382 - processed_pseudogene KNOWN OTTHUMG00000090406.1 192 192 1 ENSG00000228355.1 BX322559.3 chr21 45378201 45379635 - antisense NOVEL OTTHUMG00000090400.1 1435 330 4 ENSG00000169006.6 NTSR2 chr2 11658178 11670164 - protein_coding KNOWN OTTHUMG00000119083.2 11987 1569 4 ENSG00000273796.1 LL21NC02-21A1.1 chr21 45403809 45404369 - lincRNA NOVEL OTTHUMG00000186524.1 561 561 1 ENSG00000182871.13 COL18A1 chr21 45405137 45513720 + protein_coding KNOWN OTTHUMG00000090407.4 108584 8525 166 ENSG00000224574.1 COL18A1-AS2 chr21 45407386 45410065 - antisense NOVEL OTTHUMG00000137616.1 2680 552 4 ENSG00000183535.8 COL18A1-AS1 chr21 45419716 45425070 - antisense KNOWN OTTHUMG00000090401.3 5355 3455 6 ENSG00000275167.1 MIR6815 chr21 45478266 45478326 + miRNA KNOWN NA 61 61 1 ENSG00000173638.17 SLC19A1 chr21 45493572 45544411 - protein_coding KNOWN OTTHUMG00000090397.6 50840 9998 47 ENSG00000233922.2 AL133493.2 chr21 45593654 45603056 + lincRNA NOVEL OTTHUMG00000090408.2 9403 6810 5 ENSG00000183570.15 PCBP3 chr21 45643694 45942454 + protein_coding KNOWN OTTHUMG00000090399.8 298761 6828 151 ENSG00000275139.1 RP1-101D8.1 chr21 45759804 45763758 - antisense NOVEL OTTHUMG00000187467.1 3955 3955 1 ENSG00000205424.1 AL592528.1 chr21 45827961 45836419 - antisense NOVEL OTTHUMG00000090417.1 8459 3466 3 ENSG00000230044.1 AC110754.3 chr2 11665369 11665969 - processed_pseudogene KNOWN OTTHUMG00000133577.1 601 601 1 ENSG00000276633.1 AJ011931.1 chr21 45870854 45873345 + sense_intronic NOVEL OTTHUMG00000186525.1 2492 2492 1 ENSG00000280604.1 PCBP3-OT1 chr21 45914296 45919483 + sense_overlapping KNOWN OTTHUMG00000189529.1 5188 4807 3 ENSG00000274248.1 AJ011932.1 chr21 45974489 45974953 + lincRNA NOVEL OTTHUMG00000186529.1 465 465 1 ENSG00000142156.13 COL6A1 chr21 45981737 46005050 + protein_coding KNOWN OTTHUMG00000090440.1 23314 5343 89 ENSG00000224413.1 AP001476.2 chr21 46037052 46039807 + lincRNA NOVEL OTTHUMG00000090443.1 2756 2198 2 ENSG00000228235.1 AP001476.4 chr21 46052596 46053105 + lincRNA NOVEL OTTHUMG00000090442.1 510 415 2 ENSG00000226115.1 AP001476.3 chr21 46056516 46057567 + lincRNA NOVEL OTTHUMG00000090439.1 1052 355 2 ENSG00000233767.1 PSMA6P3 chr21 46072085 46072248 - processed_pseudogene KNOWN OTTHUMG00000090441.1 164 164 1 ENSG00000227438.1 AP001471.1 chr21 46093264 46097530 - antisense NOVEL OTTHUMG00000090438.1 4267 672 2 ENSG00000142173.13 COL6A2 chr21 46098097 46132849 + protein_coding KNOWN OTTHUMG00000090489.5 34753 5386 133 ENSG00000276411.1 RP11-494G9.1 chr2 11673964 11676925 - lincRNA NOVEL OTTHUMG00000187768.1 2962 596 2 ENSG00000160282.12 FTCD chr21 46136262 46155567 - protein_coding KNOWN OTTHUMG00000090488.2 19306 3311 95 ENSG00000237338.1 FTCD-AS1 chr21 46151614 46152647 + antisense NOVEL OTTHUMG00000090486.1 1034 500 2 ENSG00000160284.13 SPATC1L chr21 46161148 46184476 - protein_coding KNOWN OTTHUMG00000090487.3 23329 2333 9 ENSG00000228404.1 AP001468.58 chr21 46185079 46188941 + antisense NOVEL OTTHUMG00000156278.1 3863 557 2 ENSG00000160285.13 LSS chr21 46188141 46228824 - protein_coding KNOWN OTTHUMG00000090633.9 40684 7238 115 ENSG00000223901.2 AP001469.5 chr21 46220269 46225364 + antisense NOVEL OTTHUMG00000090629.2 5096 1117 6 ENSG00000215424.8 MCM3AP-AS1 chr21 46229217 46259390 + antisense KNOWN OTTHUMG00000090639.2 30174 7605 25 ENSG00000160294.9 MCM3AP chr21 46235126 46286297 - protein_coding KNOWN OTTHUMG00000090630.1 51172 9360 118 ENSG00000228137.1 AP001469.7 chr21 46246890 46247682 + antisense NOVEL OTTHUMG00000090628.1 793 390 2 ENSG00000239415.1 AP001469.9 chr21 46251549 46254133 - antisense NOVEL OTTHUMG00000090631.1 2585 2277 4 ENSG00000134324.10 LPIN1 chr2 11677595 11827409 + protein_coding KNOWN OTTHUMG00000119082.10 149815 11861 172 ENSG00000182362.12 YBEY chr21 46286337 46297751 + protein_coding KNOWN OTTHUMG00000090632.1 11415 1807 34 ENSG00000160298.16 C21orf58 chr21 46300181 46323875 - protein_coding KNOWN OTTHUMG00000090634.4 23695 5315 70 ENSG00000160299.15 PCNT chr21 46324122 46445769 + protein_coding KNOWN OTTHUMG00000090665.1 121648 11660 123 ENSG00000281637.1 Metazoa_SRP chr21 46326919 46327224 - misc_RNA NOVEL NA 306 306 1 ENSG00000225043.1 RPL18AP2 chr21 46420553 46421034 - processed_pseudogene KNOWN OTTHUMG00000154992.1 482 482 1 ENSG00000160305.16 DIP2A chr21 46458899 46569852 + protein_coding KNOWN OTTHUMG00000090717.3 110954 13557 191 ENSG00000223692.1 DIP2A-IT1 chr21 46462471 46469306 + sense_intronic NOVEL OTTHUMG00000090716.1 6836 428 4 ENSG00000202239.1 RNU6-396P chr21 46525618 46525722 + snRNA KNOWN NA 105 105 1 ENSG00000160307.8 S100B chr21 46598962 46605208 - protein_coding KNOWN OTTHUMG00000090715.2 6247 1448 9 ENSG00000160310.15 PRMT2 chr21 46635167 46665124 + protein_coding KNOWN OTTHUMG00000048806.3 29958 8031 109 ENSG00000228496.1 AC106875.1 chr2 11681460 11683328 + sense_intronic NOVEL OTTHUMG00000151822.1 1869 1171 4 ENSG00000230982.1 DSTNP1 chr21 46653558 46654022 - processed_pseudogene KNOWN OTTHUMG00000048830.1 465 465 1 ENSG00000212932.3 RPL23AP4 chr21 46690764 46691226 + processed_pseudogene KNOWN OTTHUMG00000090714.1 463 463 1 ENSG00000277248.1 U2 chr22 10736171 10736283 - snRNA NOVEL NA 113 113 1 ENSG00000274237.1 CU459211.1 chr22 10936023 10936161 - miRNA NOVEL NA 139 139 1 ENSG00000280363.1 CU104787.1 chr22 11065974 11067346 - protein_coding KNOWN NA 1373 54 2 ENSG00000279973.1 BAGE5 chr22 11066501 11068089 + protein_coding KNOWN NA 1589 120 2 ENSG00000226444.2 ACTR3BP6 chr22 11124337 11125705 + processed_pseudogene KNOWN OTTHUMG00000140398.2 1369 1241 2 ENSG00000276871.1 5_8S_rRNA chr22 11249809 11249959 - rRNA NOVEL NA 151 151 1 ENSG00000277683.1 AC137488.1 chr22 11253605 11253719 - miRNA NOVEL NA 115 115 1 ENSG00000277821.1 AC137488.2 chr22 11275565 11275637 - miRNA NOVEL NA 73 73 1 ENSG00000229905.1 RP11-206L10.4 chr1 760911 761989 + antisense NOVEL OTTHUMG00000002408.1 1079 456 2 ENSG00000225710.1 RP5-875O13.6 chr1 16548651 16552531 - unprocessed_pseudogene KNOWN OTTHUMG00000057481.1 3881 882 3 ENSG00000203643.3 AC012456.3 chr2 11721619 11724222 - antisense NOVEL OTTHUMG00000140389.2 2604 1605 2 ENSG00000273663.1 CU013544.1 chr22 11456856 11456937 + miRNA NOVEL NA 82 82 1 ENSG00000278534.1 CT867976.1 chr22 11478158 11478241 - miRNA NOVEL NA 84 84 1 ENSG00000278398.1 CT867977.1 chr22 11607867 11607939 - miRNA NOVEL NA 73 73 1 ENSG00000274416.1 CT978678.1 chr22 11628660 11628774 + miRNA NOVEL NA 115 115 1 ENSG00000278297.1 CU459202.1 chr22 11685895 11685976 + miRNA NOVEL NA 82 82 1 ENSG00000277861.1 AC116618.1 chr22 12629372 12629473 - miRNA NOVEL NA 102 102 1 ENSG00000274773.1 CU463998.1 chr22 12779259 12779341 - miRNA NOVEL NA 83 83 1 ENSG00000277372.1 CU463998.3 chr22 12779976 12780057 - miRNA NOVEL NA 82 82 1 ENSG00000275065.1 CU463998.2 chr22 12780120 12780203 - miRNA NOVEL NA 84 84 1 ENSG00000276138.1 U6 chr22 15273855 15273961 + snRNA NOVEL NA 107 107 1 ENSG00000230790.2 AC012456.4 chr2 11740997 11745301 - antisense NOVEL OTTHUMG00000151836.2 4305 561 3 ENSG00000280341.1 LA16c-60D12.1 chr22 15282557 15288670 - lincRNA NOVEL OTTHUMG00000189266.1 6114 6114 1 ENSG00000236235.1 LA16c-13E4.3 chr22 15290718 15297196 + unprocessed_pseudogene KNOWN OTTHUMG00000140362.1 6479 371 5 ENSG00000279442.1 LA16c-60D12.2 chr22 15298378 15304556 - lincRNA NOVEL OTTHUMG00000189267.1 6179 6179 1 ENSG00000184624.4 ZNF72P chr22 15326037 15343065 - unprocessed_pseudogene KNOWN OTTHUMG00000140359.1 17029 1908 3 ENSG00000236097.1 BNIP3P2 chr22 15349467 15350043 + processed_pseudogene KNOWN OTTHUMG00000155642.1 577 577 1 ENSG00000236831.1 YME1L1P1 chr22 15489990 15492564 + unprocessed_pseudogene KNOWN OTTHUMG00000140356.1 2575 297 3 ENSG00000130538.4 OR11H1 chr22 15528158 15529139 + protein_coding KNOWN OTTHUMG00000030069.2 982 982 1 ENSG00000237299.1 LA16c-60G3.6 chr22 15541436 15578006 + unprocessed_pseudogene KNOWN OTTHUMG00000140352.2 36571 568 4 ENSG00000235759.1 ARHGAP42P3 chr22 15550904 15553838 - processed_pseudogene KNOWN OTTHUMG00000140358.3 2935 2508 3 ENSG00000233408.1 LA16c-23H5.4 chr22 15557577 15560694 - antisense NOVEL OTTHUMG00000030075.2 3118 1294 3 ENSG00000265056.1 MIR548S chr2 11767444 11767525 + miRNA KNOWN NA 82 82 1 ENSG00000215268.3 LA16c-60G3.8 chr22 15562017 15564276 - processed_pseudogene KNOWN OTTHUMG00000140355.1 2260 2260 1 ENSG00000213727.3 LA16c-60G3.7 chr22 15572089 15573265 - processed_pseudogene KNOWN OTTHUMG00000140354.1 1177 1177 1 ENSG00000230643.1 LA16c-60G3.5 chr22 15588361 15588478 + unprocessed_pseudogene KNOWN OTTHUMG00000140350.1 118 118 1 ENSG00000230471.1 LA16c-2F2.8 chr22 15600908 15604882 - lincRNA NOVEL OTTHUMG00000140353.1 3975 1730 3 ENSG00000231565.1 NEK2P2 chr22 15611759 15613096 - processed_pseudogene KNOWN OTTHUMG00000140351.1 1338 1338 1 ENSG00000226474.1 LA16c-2F2.5 chr22 15615402 15615578 - unprocessed_pseudogene KNOWN OTTHUMG00000140338.2 177 177 1 ENSG00000224435.2 NF1P6 chr22 15622601 15632051 - unprocessed_pseudogene KNOWN OTTHUMG00000140337.1 9451 1649 11 ENSG00000234381.1 MED15P7 chr22 15635180 15644330 - unprocessed_pseudogene KNOWN OTTHUMG00000140336.1 9151 822 7 ENSG00000198062.13 POTEH chr22 15690026 15721631 + protein_coding KNOWN OTTHUMG00000140314.5 31606 2293 35 ENSG00000236666.1 POTEH-AS1 chr22 15699361 15703403 - antisense NOVEL OTTHUMG00000140316.1 4043 2566 2 ENSG00000265172.1 MIR4262 chr2 11836933 11836986 - miRNA KNOWN NA 54 54 1 ENSG00000212216.1 RNU6-816P chr22 15701459 15701565 + snRNA KNOWN NA 107 107 1 ENSG00000241838.3 LA16c-3G11.7 chr22 15721486 15722608 + processed_pseudogene KNOWN OTTHUMG00000140315.1 1123 1123 1 ENSG00000225255.5 LA16c-83F12.6 chr22 15746630 15778297 + lincRNA NOVEL OTTHUMG00000140260.2 31668 855 6 ENSG00000235992.1 GRAMD4P2 chr22 15749156 15750825 - processed_pseudogene KNOWN OTTHUMG00000155641.1 1670 1097 2 ENSG00000206195.9 DUXAP8 chr22 15784959 15829984 + processed_transcript NOVEL OTTHUMG00000185288.2 45026 5545 32 ENSG00000271127.1 LL22NC03-N64E9.1 chr22 15796959 15798346 + sense_intronic NOVEL OTTHUMG00000185289.1 1388 1388 1 ENSG00000232775.5 AP000525.10 chr22 15805263 15820884 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000140198.3 15622 1572 8 ENSG00000272872.1 LL22NC03-N14H11.1 chr22 15823197 15823890 + sense_intronic NOVEL OTTHUMG00000186093.1 694 694 1 ENSG00000271672.1 DUXAP8 chr22 15826566 15827187 + transcribed_processed_pseudogene KNOWN OTTHUMG00000140194.3 622 622 1 ENSG00000223875.2 NBEAP3 chr22 15852990 15893942 + unprocessed_pseudogene KNOWN OTTHUMG00000140196.2 40953 1493 5 ENSG00000224184.4 AC096559.1 chr2 11848622 12578348 + lincRNA NOVEL OTTHUMG00000151709.2 729727 3876 27 ENSG00000215270.3 LA16c-60H5.7 chr22 15854195 15855243 - processed_pseudogene KNOWN OTTHUMG00000140200.1 1049 1049 1 ENSG00000229286.1 LA16c-4G1.4 chr22 15901791 15901911 + unprocessed_pseudogene KNOWN OTTHUMG00000140193.1 121 121 1 ENSG00000233866.1 LA16c-4G1.3 chr22 15914721 15915800 - lincRNA NOVEL OTTHUMG00000140195.2 1080 586 2 ENSG00000278188.1 U6 chr22 16141767 16141872 + snRNA NOVEL NA 106 106 1 ENSG00000278335.1 AC092854.1 chr22 16232345 16232425 + miRNA NOVEL NA 81 81 1 ENSG00000225293.1 ABCD1P4 chr22 16387694 16390887 + unprocessed_pseudogene KNOWN OTTHUMG00000030330.4 3194 604 4 ENSG00000226160.1 LA16c-17H1.3 chr22 16405330 16405417 + processed_pseudogene KNOWN OTTHUMG00000140366.1 88 88 1 ENSG00000229658.1 PABPC1P9 chr22 16423943 16426031 + unprocessed_pseudogene KNOWN OTTHUMG00000140367.3 2089 1612 4 ENSG00000227367.1 SLC9B1P4 chr22 16428947 16476870 - unprocessed_pseudogene KNOWN OTTHUMG00000140399.1 47924 1288 9 ENSG00000280263.1 ACTR3BP2 chr22 16486985 16488322 + processed_pseudogene KNOWN NA 1338 1338 1 ENSG00000238503.1 SNORD18 chr2 12030303 12030372 - snoRNA NOVEL NA 70 70 1 ENSG00000235969.1 CHEK2P4 chr22 16503304 16509475 + unprocessed_pseudogene KNOWN OTTHUMG00000140400.1 6172 246 3 ENSG00000273362.1 KB-67B5.17 chr22 16521059 16527237 + lincRNA NOVEL OTTHUMG00000186094.1 6179 661 3 ENSG00000233995.1 KB-67B5.12 chr22 16572027 16574637 + unprocessed_pseudogene KNOWN OTTHUMG00000141256.1 2611 617 5 ENSG00000239435.2 KCNMB3P1 chr22 16575363 16582707 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000141303.3 7345 3389 5 ENSG00000198445.4 CCT8L2 chr22 16590751 16592810 - protein_coding KNOWN OTTHUMG00000141302.1 2060 2060 1 ENSG00000240122.1 FABP5P11 chr22 16595089 16595485 - processed_pseudogene KNOWN OTTHUMG00000150095.1 397 397 1 ENSG00000221084.1 AP000547.1 chr22 16598717 16598804 - miRNA NOVEL NA 88 88 1 ENSG00000100181.20 TPTEP1 chr22 16601887 16698742 + lincRNA NOVEL OTTHUMG00000141300.7 96856 12081 43 ENSG00000267338.1 KB-7G2.9 chr22 16616170 16617114 + lincRNA NOVEL OTTHUMG00000182183.1 945 546 2 ENSG00000249288.1 SLC25A15P5 chr22 16645695 16646581 - unprocessed_pseudogene KNOWN OTTHUMG00000142830.1 887 253 2 ENSG00000264089.1 MIR3681 chr2 12199130 12199201 + miRNA KNOWN NA 72 72 1 ENSG00000249263.2 PARP4P3 chr22 16653892 16659628 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000142831.4 5737 317 2 ENSG00000189295.12 ANKRD62P1-PARP4P3 chr22 16654066 16675540 - processed_transcript NOVEL OTTHUMG00000186061.1 21475 1181 13 ENSG00000259271.1 ANKRD62P1 chr22 16671090 16679493 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000149993.3 8404 1623 6 ENSG00000273244.1 KB-7G2.8 chr22 16676016 16694648 - processed_transcript NOVEL OTTHUMG00000172533.1 18633 875 7 ENSG00000241717.1 VWFP1 chr22 16690103 16704477 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000143725.1 14375 2907 12 ENSG00000235343.1 AC005301.8 chr22 16746869 16748645 - lincRNA NOVEL OTTHUMG00000153504.1 1777 1241 2 ENSG00000172967.7 XKR3 chr22 16783412 16821699 - protein_coding KNOWN OTTHUMG00000143726.1 38288 1690 4 ENSG00000229027.3 HSFY1P1 chr22 16827474 16829335 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000143727.3 1862 1381 4 ENSG00000234121.1 GPM6BP3 chr22 16837522 16837666 + processed_pseudogene KNOWN OTTHUMG00000144175.2 145 145 1 ENSG00000237835.1 AC007064.22 chr22 16855804 16856162 + processed_pseudogene KNOWN OTTHUMG00000144176.1 359 359 1 ENSG00000207183.1 RNU6-843P chr2 12411398 12411501 - snRNA KNOWN NA 104 104 1 ENSG00000220248.1 ZNF402P chr22 16857619 16860718 - processed_pseudogene KNOWN OTTHUMG00000147350.1 3100 3100 1 ENSG00000237689.1 AC007064.24 chr22 16869478 16871126 + lincRNA NOVEL OTTHUMG00000147348.1 1649 500 2 ENSG00000228122.1 MTND1P17 chr22 16876218 16876421 - processed_pseudogene KNOWN OTTHUMG00000147347.1 204 204 1 ENSG00000237358.1 AC007064.25 chr22 16876552 16876902 - processed_pseudogene KNOWN OTTHUMG00000147345.1 351 351 1 ENSG00000225480.1 AC006548.19 chr22 16897445 16897546 + processed_pseudogene KNOWN OTTHUMG00000147346.1 102 102 1 ENSG00000230481.2 IGKV1OR22-5 chr22 16904219 16904696 - IG_V_pseudogene KNOWN OTTHUMG00000147349.2 478 354 2 ENSG00000253691.2 IGKV2OR22-4 chr22 16914235 16914981 - IG_V_pseudogene KNOWN OTTHUMG00000149991.2 747 367 2 ENSG00000253460.2 IGKV2OR22-3 chr22 16921443 16922173 - IG_V_pseudogene KNOWN OTTHUMG00000149994.2 731 360 2 ENSG00000254264.2 IGKV3OR22-2 chr22 16925952 16926444 - IG_V_pseudogene KNOWN OTTHUMG00000149995.2 493 313 2 ENSG00000253481.2 IGKV1OR22-1 chr22 16933521 16934003 - IG_V_pseudogene KNOWN OTTHUMG00000149996.2 483 360 2 ENSG00000223360.1 AC096559.2 chr2 12598987 12605145 + lincRNA NOVEL OTTHUMG00000151710.1 6159 399 4 ENSG00000280156.1 AC006548.28 chr22 16950086 17034417 - sense_overlapping NOVEL OTTHUMG00000189184.1 84332 84332 1 ENSG00000215568.6 GAB4 chr22 16961936 17008222 - protein_coding KNOWN OTTHUMG00000149992.3 46287 3747 25 ENSG00000270226.1 AC006548.26 chr22 17012404 17012932 + processed_pseudogene KNOWN OTTHUMG00000184893.1 529 529 1 ENSG00000276400.1 VN1R9P chr22 17021398 17022570 - processed_pseudogene KNOWN OTTHUMG00000188007.1 1173 867 2 ENSG00000237438.5 CECR7 chr22 17036570 17060825 + lincRNA KNOWN OTTHUMG00000150027.4 24256 4354 16 ENSG00000273203.1 AC006946.16 chr22 17067821 17070675 + lincRNA NOVEL OTTHUMG00000186095.1 2855 2855 1 ENSG00000273442.1 AC006946.17 chr22 17080701 17081456 + lincRNA NOVEL OTTHUMG00000186096.1 756 756 1 ENSG00000177663.12 IL17RA chr22 17084954 17115694 + protein_coding KNOWN OTTHUMG00000150026.1 30741 9036 31 ENSG00000235328.1 AC006946.12 chr22 17093612 17093939 - processed_pseudogene KNOWN OTTHUMG00000150025.2 328 328 1 ENSG00000183307.3 CECR6 chr22 17116299 17121367 - protein_coding KNOWN OTTHUMG00000030471.5 5069 5069 3 ENSG00000261117.1 RP11-333O1.1 chr2 12715415 12716227 + lincRNA NOVEL OTTHUMG00000175731.1 813 813 1 ENSG00000235478.3 AC006946.15 chr22 17121586 17132104 + lincRNA NOVEL OTTHUMG00000153502.4 10519 1354 8 ENSG00000069998.11 CECR5 chr22 17137511 17165287 - protein_coding KNOWN OTTHUMG00000150071.2 27777 4936 32 ENSG00000185837.3 CECR5-AS1 chr22 17159384 17165445 + antisense KNOWN OTTHUMG00000150096.2 6062 631 4 ENSG00000093072.14 CECR1 chr22 17178790 17221989 - protein_coding KNOWN OTTHUMG00000030726.8 43200 5800 66 ENSG00000236325.1 AC005300.5 chr22 17192936 17193308 + processed_pseudogene KNOWN OTTHUMG00000150066.1 373 373 1 ENSG00000203416.2 FAM32B chr22 17213728 17214155 + processed_pseudogene KNOWN OTTHUMG00000150068.1 428 428 1 ENSG00000241832.1 CECR3 chr22 17256859 17266733 - lincRNA KNOWN OTTHUMG00000150063.1 9875 1915 3 ENSG00000231004.2 CECR9 chr22 17329034 17329232 + TEC KNOWN OTTHUMG00000150065.1 199 199 1 ENSG00000239547.3 RN7SL843P chr22 17352881 17353177 - misc_RNA KNOWN NA 297 297 1 ENSG00000099954.17 CECR2 chr22 17359949 17558149 + protein_coding KNOWN OTTHUMG00000150072.9 198201 10759 85 ENSG00000266584.1 AL355149.1 chr1 16548914 16548987 + miRNA NOVEL NA 74 74 1 ENSG00000071575.10 TRIB2 chr2 12716889 12742734 + protein_coding KNOWN OTTHUMG00000090575.4 25846 4588 11 ENSG00000229492.1 AC004019.10 chr22 17418697 17419828 + processed_pseudogene KNOWN OTTHUMG00000150062.1 1132 1132 1 ENSG00000232305.1 CLCP1 chr22 17424388 17424775 - processed_pseudogene KNOWN OTTHUMG00000155638.1 388 388 1 ENSG00000228045.1 DNAJA1P6 chr22 17518676 17519029 - processed_pseudogene KNOWN OTTHUMG00000150091.1 354 354 1 ENSG00000182902.12 SLC25A18 chr22 17563439 17590994 + protein_coding KNOWN OTTHUMG00000150089.3 27556 4741 35 ENSG00000236754.4 AC004019.13 chr22 17580157 17589192 - antisense NOVEL OTTHUMG00000150092.1 9036 1960 8 ENSG00000131100.11 ATP6V1E1 chr22 17592136 17628818 - protein_coding KNOWN OTTHUMG00000059320.4 36683 3212 53 ENSG00000099968.16 BCL2L13 chr22 17628855 17730855 + protein_coding KNOWN OTTHUMG00000150088.3 102001 7662 83 ENSG00000015475.17 BID chr22 17734138 17774770 - protein_coding KNOWN OTTHUMG00000150087.5 40633 4446 73 ENSG00000264757.1 MIR3198-1 chr22 17764180 17764259 - miRNA KNOWN NA 80 80 1 ENSG00000269220.1 LINC00528 chr22 17777322 17779481 + lincRNA KNOWN OTTHUMG00000186097.1 2160 2160 1 ENSG00000264370.1 MIR3125 chr2 12737367 12737444 + miRNA KNOWN NA 78 78 1 ENSG00000243156.6 MICAL3 chr22 17787649 18024559 - protein_coding KNOWN OTTHUMG00000150067.5 236911 22354 192 ENSG00000093100.13 XXbac-B461K10.4 chr22 17787652 17811497 - processed_transcript NOVEL OTTHUMG00000150085.1 23846 4328 5 ENSG00000207780.1 MIR648 chr22 17980868 17980961 - miRNA KNOWN NA 94 94 1 ENSG00000235445.1 XXbac-B476C20.14 chr22 17983205 17983619 - sense_intronic NOVEL OTTHUMG00000150069.1 415 361 2 ENSG00000234913.1 XXbac-B476C20.13 chr22 18004270 18007308 - sense_intronic NOVEL OTTHUMG00000150064.1 3039 2493 2 ENSG00000237446.1 RHEBP3 chr22 18019214 18020200 + processed_pseudogene KNOWN OTTHUMG00000150061.1 987 351 3 ENSG00000235295.1 FLJ41941 chr22 18029385 18037968 + lincRNA NOVEL OTTHUMG00000153506.1 8584 2379 2 ENSG00000225335.3 XXbac-B476C20.9 chr22 18076527 18078884 - antisense NOVEL OTTHUMG00000149968.2 2358 2235 4 ENSG00000215193.11 PEX26 chr22 18077920 18131138 + protein_coding KNOWN OTTHUMG00000149970.5 53219 20045 26 ENSG00000236890.2 XXbac-B476C20.11 chr22 18081466 18081675 - processed_pseudogene KNOWN OTTHUMG00000150070.2 210 210 1 ENSG00000225649.4 AC064875.2 chr2 12966784 13007013 - processed_transcript NOVEL OTTHUMG00000151711.1 40230 2846 15 ENSG00000235617.1 XXbac-B476C20.10 chr22 18101612 18101888 + unprocessed_pseudogene KNOWN OTTHUMG00000150060.1 277 277 1 ENSG00000225225.1 ARL2BPP10 chr22 18102457 18103649 - processed_pseudogene KNOWN OTTHUMG00000155640.1 1193 531 2 ENSG00000183785.13 TUBA8 chr22 18110331 18146554 + protein_coding KNOWN OTTHUMG00000150097.4 36224 3641 20 ENSG00000280007.1 AC008079.10 chr22 18110759 18131154 - antisense NOVEL OTTHUMG00000189278.1 20396 20396 1 ENSG00000184979.9 USP18 chr22 18149899 18177397 + protein_coding KNOWN OTTHUMG00000150104.1 27499 2129 11 ENSG00000187979.4 AC008079.9 chr22 18178038 18205915 - antisense NOVEL OTTHUMG00000150103.2 27878 1859 9 ENSG00000276160.1 GGTLC5P chr22 18340145 18345899 + unprocessed_pseudogene KNOWN OTTHUMG00000188346.1 5755 998 7 ENSG00000274044.3 AC011718.2 chr22 18361823 18391105 - lincRNA NOVEL OTTHUMG00000188347.1 29283 4606 38 ENSG00000276874.1 AC011718.3 chr22 18374106 18375689 + lincRNA NOVEL OTTHUMG00000188348.1 1584 375 2 ENSG00000275060.1 PPP1R26P3 chr22 18400407 18404206 - unprocessed_pseudogene KNOWN OTTHUMG00000188349.1 3800 3800 1 ENSG00000229370.1 AC092635.1 chr2 13537673 13609168 + lincRNA NOVEL OTTHUMG00000151714.1 71496 455 2 ENSG00000277017.1 XXbac-B33L19.6 chr22 18486999 18491247 - lincRNA NOVEL OTTHUMG00000188350.1 4249 1079 4 ENSG00000277870.3 FAM230A chr22 18487126 18500583 + lincRNA KNOWN OTTHUMG00000189114.2 13458 1942 10 ENSG00000278044.1 XXbac-B33L19.12 chr22 18501794 18512187 - lincRNA NOVEL OTTHUMG00000188351.1 10394 358 2 ENSG00000274252.1 GGTLC3 chr22 18516344 18518161 - protein_coding KNOWN OTTHUMG00000188352.1 1818 968 6 ENSG00000275319.1 Metazoa_SRP chr22 18524620 18524935 + misc_RNA NOVEL NA 316 316 1 ENSG00000277690.2 XXbac-B33L19.15 chr22 18527157 18527626 + processed_pseudogene KNOWN OTTHUMG00000189496.1 470 470 1 ENSG00000278558.3 TMEM191B chr22 18527802 18530573 + protein_coding KNOWN OTTHUMG00000188353.1 2772 2067 37 ENSG00000274602.3 PI4KAP1 chr22 18533646 18577968 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000188354.1 44323 4812 80 ENSG00000280694.1 Metazoa_SRP chr22 18598750 18599065 + misc_RNA NOVEL NA 316 316 1 ENSG00000274625.1 SCARNA17 chr22 18605355 18605497 + scaRNA NOVEL NA 143 143 1 ENSG00000230448.4 LINC00276 chr2 13710531 14400963 - lincRNA NOVEL OTTHUMG00000151716.2 690433 3848 9 ENSG00000222630.2 RN7SKP41 chr22 18605802 18606102 - misc_RNA KNOWN NA 301 301 1 ENSG00000275793.1 RIMBP3 chr22 18605815 18611919 - protein_coding KNOWN OTTHUMG00000188355.1 6105 6105 1 ENSG00000275362.1 Metazoa_SRP chr22 18615581 18615900 + misc_RNA NOVEL NA 320 320 1 ENSG00000278110.1 XXbac-B33L19.10 chr22 18623339 18625289 - unprocessed_pseudogene KNOWN OTTHUMG00000188356.1 1951 758 4 ENSG00000273907.1 XXbac-B33L19.11 chr22 18636445 18638405 - unprocessed_pseudogene KNOWN OTTHUMG00000188357.1 1961 834 5 ENSG00000273643.1 AC011718.4 chr22 18650023 18653617 - processed_pseudogene KNOWN OTTHUMG00000188358.1 3595 3595 1 ENSG00000278008.1 PPP1R26P4 chr22 18715815 18719341 + processed_pseudogene KNOWN OTTHUMG00000188024.1 3527 3527 1 ENSG00000182824.7 AC008132.15 chr22 18733914 18757906 + lincRNA NOVEL OTTHUMG00000187471.1 23993 2990 10 ENSG00000197421.8 GGT3P chr22 18773665 18843399 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000150161.2 69735 2744 31 ENSG00000239989.1 AC008132.14 chr22 18794414 18794804 - transcribed_processed_pseudogene KNOWN OTTHUMG00000155694.1 391 391 1 ENSG00000227718.1 AC016730.1 chr2 13723048 13758152 + lincRNA NOVEL OTTHUMG00000151713.1 35105 832 3 ENSG00000234764.2 E2F6P1 chr22 18833694 18834438 + processed_pseudogene KNOWN OTTHUMG00000150178.2 745 745 1 ENSG00000161103.10 AC008132.13 chr22 18846811 18861049 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000150176.3 14239 7689 15 ENSG00000215544.6 BCRP7 chr22 18855621 18858640 - unprocessed_pseudogene KNOWN OTTHUMG00000030708.4 3020 544 4 ENSG00000276095.2 AC008103.3 chr22 18873543 18894407 - lincRNA NOVEL OTTHUMG00000188102.2 20865 535 8 ENSG00000279987.1 AC008103.4 chr22 18883502 18884682 - sense_intronic NOVEL OTTHUMG00000189176.1 1181 1181 1 ENSG00000183628.11 DGCR6 chr22 18906028 18914238 + protein_coding KNOWN OTTHUMG00000150162.4 8211 5262 34 ENSG00000100033.15 PRODH chr22 18912777 18936553 - protein_coding KNOWN OTTHUMG00000150163.4 23777 8776 124 ENSG00000279560.1 AC007326.1 chr22 18945123 18946971 + protein_coding KNOWN NA 1849 228 2 ENSG00000280418.1 AC007326.10 chr22 18951934 18959512 - lincRNA NOVEL OTTHUMG00000189175.1 7579 7579 1 ENSG00000237517.7 DGCR5 chr22 18970514 19031242 + antisense KNOWN OTTHUMG00000149977.4 60729 7448 21 ENSG00000277503.1 AC016730.2 chr2 13839140 13839246 - miRNA NOVEL NA 107 107 1 ENSG00000271275.1 AC007326.9 chr22 18997138 18997595 - processed_pseudogene KNOWN OTTHUMG00000184895.1 458 458 1 ENSG00000273032.1 DGCR9 chr22 19017834 19020248 + lincRNA NOVEL OTTHUMG00000186098.1 2415 2415 1 ENSG00000270393.1 AC000095.9 chr22 19018043 19018916 - processed_pseudogene KNOWN OTTHUMG00000184897.1 874 874 1 ENSG00000273164.1 AC000095.11 chr22 19023056 19023550 + sense_intronic NOVEL OTTHUMG00000186099.1 495 495 1 ENSG00000241527.1 CA15P1 chr22 19031564 19034564 - unitary_pseudogene KNOWN OTTHUMG00000157581.1 3001 905 8 ENSG00000070413.17 DGCR2 chr22 19036282 19122454 - protein_coding KNOWN OTTHUMG00000150141.2 86173 5636 61 ENSG00000206739.1 Y_RNA chr22 19045256 19045367 + misc_RNA NOVEL NA 112 112 1 ENSG00000273311.1 DGCR11 chr22 19046162 19048375 - sense_intronic KNOWN OTTHUMG00000186100.1 2214 2214 1 ENSG00000237347.2 AC004461.4 chr22 19055801 19056512 + processed_pseudogene KNOWN OTTHUMG00000150140.2 712 403 2 ENSG00000281530.1 DGCR12 chr22 19061041 19061843 - sense_intronic KNOWN OTTHUMG00000189728.1 803 803 1 ENSG00000251859.1 RNU6-1288P chr2 14274622 14274725 - snRNA KNOWN NA 104 104 1 ENSG00000223461.1 AC004471.9 chr22 19121529 19124503 + antisense NOVEL OTTHUMG00000150139.1 2975 582 2 ENSG00000272682.1 AC004471.10 chr22 19124309 19128449 - lincRNA NOVEL OTTHUMG00000186185.2 4141 1514 3 ENSG00000231086.1 TSSK1A chr22 19124879 19125646 + unitary_pseudogene KNOWN OTTHUMG00000150125.2 768 768 1 ENSG00000100056.10 DGCR14 chr22 19130279 19144684 - protein_coding KNOWN OTTHUMG00000150119.5 14406 6003 32 ENSG00000206203.4 TSSK2 chr22 19130808 19132623 + protein_coding KNOWN OTTHUMG00000150118.1 1816 1816 1 ENSG00000063515.2 GSC2 chr22 19148576 19150283 - protein_coding KNOWN OTTHUMG00000150122.2 1708 1033 3 ENSG00000260924.2 LINC01311 chr22 19171395 19172839 + antisense NOVEL OTTHUMG00000172740.2 1445 1445 1 ENSG00000100075.8 SLC25A1 chr22 19175575 19178830 - protein_coding KNOWN OTTHUMG00000150123.3 3256 2096 34 ENSG00000070371.14 CLTCL1 chr22 19179473 19291716 - protein_coding KNOWN OTTHUMG00000150109.9 112244 10049 170 ENSG00000230194.1 AC000081.2 chr22 19238443 19238739 - processed_pseudogene KNOWN OTTHUMG00000150110.1 297 297 1 ENSG00000280595.1 AC064846.1 chr2 14341178 14341259 + miRNA NOVEL NA 82 82 1 ENSG00000251940.1 SNORA15 chr22 19249873 19249966 + snoRNA NOVEL NA 94 94 1 ENSG00000233471.2 KRT18P62 chr22 19257520 19258806 + processed_pseudogene KNOWN OTTHUMG00000150111.1 1287 1287 1 ENSG00000100084.13 HIRA chr22 19330698 19447450 - protein_coding KNOWN OTTHUMG00000150134.4 116753 4299 58 ENSG00000242259.7 C22orf39 chr22 19351368 19448232 - protein_coding KNOWN OTTHUMG00000150137.4 96865 6943 39 ENSG00000244296.3 RN7SL168P chr22 19365766 19366044 + misc_RNA KNOWN NA 279 279 1 ENSG00000185608.7 MRPL40 chr22 19431902 19436075 + protein_coding KNOWN OTTHUMG00000150136.3 4174 1965 11 ENSG00000185065.6 AC000068.5 chr22 19447893 19450105 + antisense NOVEL OTTHUMG00000150135.1 2213 2097 2 ENSG00000070010.17 UFD1L chr22 19449910 19479215 - protein_coding KNOWN OTTHUMG00000150130.14 29306 8736 76 ENSG00000273300.1 AC000068.9 chr22 19454179 19454605 + antisense NOVEL OTTHUMG00000186101.1 427 427 1 ENSG00000273212.1 AC000068.10 chr22 19456503 19456962 + antisense NOVEL OTTHUMG00000186102.1 460 460 1 ENSG00000237261.2 Metazoa_SRP chr2 14530941 14531223 + misc_RNA NOVEL NA 283 283 1 ENSG00000093009.8 CDC45 chr22 19479459 19520612 + protein_coding KNOWN OTTHUMG00000150386.1 41154 2846 124 ENSG00000184113.9 CLDN5 chr22 19523024 19527545 - protein_coding KNOWN OTTHUMG00000150441.4 4522 3429 6 ENSG00000281548.1 LINC00895 chr22 19565203 19566839 - lincRNA KNOWN OTTHUMG00000189517.1 1637 1637 1 ENSG00000230485.1 AC000077.2 chr22 19630750 19633574 - processed_pseudogene KNOWN OTTHUMG00000150438.1 2825 953 3 ENSG00000225007.1 AC000067.1 chr22 19667023 19667555 + lincRNA NOVEL OTTHUMG00000150429.1 533 287 2 ENSG00000184702.16 SEPT5 chr22 19714464 19724772 + protein_coding KNOWN OTTHUMG00000150399.7 10309 5914 130 ENSG00000203618.5 GP1BB chr22 19722945 19724771 + protein_coding KNOWN OTTHUMG00000150397.2 1827 1553 2 ENSG00000184058.11 TBX1 chr22 19756703 19783593 + protein_coding KNOWN OTTHUMG00000150421.3 26891 3496 42 ENSG00000185838.12 GNB1L chr22 19783224 19854939 - protein_coding KNOWN OTTHUMG00000150279.2 71716 6988 36 ENSG00000235776.2 AC000089.3 chr22 19792294 19793094 + processed_pseudogene KNOWN OTTHUMG00000150618.2 801 801 1 ENSG00000219481.9 NBPF1 chr1 16562319 16613562 - protein_coding KNOWN OTTHUMG00000002487.10 51244 12212 88 ENSG00000228505.4 AC011897.2 chr2 14616428 14630192 + lincRNA NOVEL OTTHUMG00000151715.1 13765 346 5 ENSG00000215012.7 C22orf29 chr22 19846138 19854896 - protein_coding KNOWN OTTHUMG00000030314.3 8759 6803 14 ENSG00000184470.18 TXNRD2 chr22 19875517 19941992 - protein_coding KNOWN OTTHUMG00000149975.6 66476 7694 194 ENSG00000232926.1 AC000078.5 chr22 19887289 19887970 + processed_pseudogene KNOWN OTTHUMG00000150619.2 682 682 1 ENSG00000093010.10 COMT chr22 19941607 19969975 + protein_coding KNOWN OTTHUMG00000150529.7 28369 5195 55 ENSG00000265087.1 MIR4761 chr22 19963753 19963834 + miRNA KNOWN NA 82 82 1 ENSG00000099889.12 ARVCF chr22 19969896 20016808 - protein_coding KNOWN OTTHUMG00000030426.8 46913 5621 100 ENSG00000183597.14 TANGO2 chr22 20017014 20065926 + protein_coding KNOWN OTTHUMG00000150510.24 48913 6157 164 ENSG00000208023.2 MIR185 chr22 20033133 20033241 + miRNA KNOWN NA 109 109 1 ENSG00000236540.6 AC006547.13 chr22 20058030 20070569 - antisense NOVEL OTTHUMG00000150731.5 12540 2267 38 ENSG00000268292.1 AC006547.15 chr22 20064552 20065705 - antisense NOVEL OTTHUMG00000182465.1 1154 583 2 ENSG00000162981.13 FAM84A chr2 14632686 14650814 + protein_coding KNOWN OTTHUMG00000119093.3 18129 8384 13 ENSG00000277950.1 Metazoa_SRP chr22 20070716 20070965 + misc_RNA NOVEL NA 250 250 1 ENSG00000128191.12 DGCR8 chr22 20080232 20111877 + protein_coding KNOWN OTTHUMG00000150503.2 31646 7315 75 ENSG00000266567.1 MIR3618 chr22 20085746 20085833 + miRNA KNOWN NA 88 88 1 ENSG00000221366.2 MIR1306 chr22 20086042 20086150 + miRNA KNOWN NA 109 109 1 ENSG00000243762.1 AC006547.8 chr22 20110821 20111875 - antisense NOVEL OTTHUMG00000150489.2 1055 526 2 ENSG00000099899.13 TRMT2A chr22 20111866 20117392 - protein_coding KNOWN OTTHUMG00000150454.9 5527 3963 111 ENSG00000278278.1 MIR6816 chr22 20114686 20114751 - miRNA KNOWN NA 66 66 1 ENSG00000099901.15 RANBP1 chr22 20115938 20127357 + protein_coding KNOWN OTTHUMG00000150490.32 11420 4622 59 ENSG00000264346.1 SNORA77 chr22 20126402 20126526 + snoRNA NOVEL NA 125 125 1 ENSG00000099904.14 ZDHHC8 chr22 20129456 20148007 + protein_coding KNOWN OTTHUMG00000150499.3 18552 5542 49 ENSG00000235127.1 AC068286.1 chr2 14886647 14907664 - lincRNA NOVEL OTTHUMG00000151726.1 21018 467 3 ENSG00000234409.6 AC006547.14 chr22 20148427 20151065 - protein_coding NOVEL OTTHUMG00000150751.5 2639 1598 15 ENSG00000249923.1 XXbac-B444P24.8 chr22 20198729 20204918 - antisense NOVEL OTTHUMG00000150567.4 6190 2228 4 ENSG00000236499.2 LINC00896 chr22 20206397 20208524 + lincRNA KNOWN OTTHUMG00000186112.1 2128 2128 2 ENSG00000040608.12 RTN4R chr22 20241415 20283246 - protein_coding KNOWN OTTHUMG00000150572.2 41832 3339 13 ENSG00000221039.2 MIR1286 chr22 20249125 20249235 - miRNA KNOWN NA 111 111 1 ENSG00000161132.6 XXbac-B444P24.10 chr22 20299760 20313216 + unprocessed_pseudogene KNOWN OTTHUMG00000150582.2 13457 1240 10 ENSG00000128185.8 DGCR6L chr22 20314276 20320080 - protein_coding KNOWN OTTHUMG00000150583.3 5805 1154 13 ENSG00000273343.1 XXbac-B444P24.13 chr22 20318119 20318749 - sense_intronic NOVEL OTTHUMG00000186113.1 631 631 1 ENSG00000273139.1 XXbac-B444P24.14 chr22 20320739 20321203 + lincRNA NOVEL OTTHUMG00000186114.1 465 465 1 ENSG00000188280.10 FAM230A chr22 20338805 20354372 + antisense NOVEL OTTHUMG00000150686.6 15568 2256 21 ENSG00000151779.11 NBAS chr2 15166909 15561330 - protein_coding KNOWN OTTHUMG00000121153.2 394422 8948 114 ENSG00000235578.1 XXbac-B33L19.4 chr22 20343203 20344365 - lincRNA NOVEL OTTHUMG00000150605.1 1163 446 2 ENSG00000161133.15 USP41 chr22 20350578 20390758 - protein_coding KNOWN OTTHUMG00000151317.4 40181 1592 31 ENSG00000185252.16 ZNF74 chr22 20394115 20408461 + protein_coding KNOWN OTTHUMG00000150687.3 14347 6251 45 ENSG00000207343.1 RNU6-225P chr22 20416797 20416899 - snRNA KNOWN NA 103 103 1 ENSG00000244486.6 SCARF2 chr22 20424585 20437859 - protein_coding KNOWN OTTHUMG00000150779.5 13275 3604 41 ENSG00000277971.1 XXbac-B562F10.12 chr22 20429241 20446620 - protein_coding KNOWN OTTHUMG00000150778.43 17380 644 5 ENSG00000099910.15 KLHL22 chr22 20441519 20495883 - protein_coding KNOWN OTTHUMG00000188269.1 54365 4646 48 ENSG00000215493.3 XXbac-B562F10.11 chr22 20450122 20451824 + processed_pseudogene KNOWN OTTHUMG00000151320.1 1703 1703 1 ENSG00000255156.1 RNY1P9 chr22 20475203 20475311 - misc_RNA KNOWN NA 109 109 1 ENSG00000201916.1 Y_RNA chr22 20481158 20481268 + misc_RNA NOVEL NA 111 111 1 ENSG00000229087.1 RP11-32P22.1 chr2 15397435 15397782 - processed_pseudogene KNOWN OTTHUMG00000157025.1 348 348 1 ENSG00000242876.3 RN7SL812P chr22 20481935 20482213 - misc_RNA KNOWN NA 279 279 1 ENSG00000236670.1 KRT18P5 chr22 20482815 20484105 - processed_pseudogene KNOWN OTTHUMG00000150808.1 1291 1291 1 ENSG00000265300.1 AC007731.1 chr22 20483225 20483316 - miRNA NOVEL NA 92 92 1 ENSG00000099917.16 MED15 chr22 20495913 20587632 + protein_coding KNOWN OTTHUMG00000150810.8 91720 10374 221 ENSG00000236003.1 AC007050.17 chr22 20522070 20523870 - antisense NOVEL OTTHUMG00000150842.1 1801 652 3 ENSG00000250261.1 AC007050.18 chr22 20587496 20592218 - unprocessed_pseudogene KNOWN OTTHUMG00000150880.1 4723 1123 6 ENSG00000223553.4 SMPD4P1 chr22 20602595 20656914 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000030245.5 54320 3871 30 ENSG00000276427.1 IGLL4P chr22 20632619 20632751 + unprocessed_pseudogene KNOWN OTTHUMG00000188038.1 133 133 1 ENSG00000238125.1 SLC9A3P2 chr22 20652730 20654750 + processed_pseudogene KNOWN OTTHUMG00000150753.1 2021 2021 1 ENSG00000264718.1 AC007050.1 chr22 20657035 20657116 + miRNA NOVEL NA 82 82 1 ENSG00000234022.1 AC008278.2 chr2 15564170 15573868 + antisense NOVEL OTTHUMG00000151725.1 9699 409 4 ENSG00000229107.2 ABHD17AP4 chr22 20667836 20670984 - processed_pseudogene KNOWN OTTHUMG00000150752.1 3149 909 2 ENSG00000217261.4 POM121L4P chr22 20689929 20698938 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000150756.2 9010 1891 6 ENSG00000235062.4 BCRP5 chr22 20697962 20698934 - unprocessed_pseudogene KNOWN OTTHUMG00000150757.1 973 253 2 ENSG00000226287.6 TMEM191A chr22 20701114 20704606 + processed_transcript KNOWN OTTHUMG00000150164.2 3493 2707 58 ENSG00000241973.9 PI4KA chr22 20707691 20859417 - protein_coding KNOWN OTTHUMG00000167440.2 151727 11407 176 ENSG00000234252.1 AC007308.6 chr22 20723047 20725920 + antisense NOVEL OTTHUMG00000153507.1 2874 2400 2 ENSG00000099937.9 SERPIND1 chr22 20773879 20787720 + protein_coding KNOWN OTTHUMG00000150755.1 13842 2553 9 ENSG00000099940.10 SNAP29 chr22 20858983 20891218 + protein_coding KNOWN OTTHUMG00000150765.5 32236 4953 12 ENSG00000272600.1 AC007308.7 chr22 20889206 20891214 - antisense NOVEL OTTHUMG00000186194.1 2009 373 2 ENSG00000099942.11 CRKL chr22 20917426 20953749 + protein_coding KNOWN OTTHUMG00000150807.1 36324 5325 7 ENSG00000079785.13 DDX1 chr2 15591178 15631111 + protein_coding KNOWN OTTHUMG00000090593.3 39934 3833 109 ENSG00000237476.1 XXbac-B135H6.15 chr22 20957092 20964679 + lincRNA NOVEL OTTHUMG00000150805.1 7588 684 2 ENSG00000183773.14 AIFM3 chr22 20965108 20981360 + protein_coding KNOWN OTTHUMG00000150804.5 16253 5401 161 ENSG00000099949.17 LZTR1 chr22 20979462 20999038 + protein_coding KNOWN OTTHUMG00000150878.1 19577 7556 119 ENSG00000272829.1 XXbac-B135H6.18 chr22 20981361 20981755 - lincRNA NOVEL OTTHUMG00000186195.1 395 395 1 ENSG00000184436.10 THAP7 chr22 20999104 21002196 - protein_coding KNOWN OTTHUMG00000150879.1 3093 2879 26 ENSG00000230513.1 THAP7-AS1 chr22 21001886 21010342 + antisense KNOWN OTTHUMG00000150877.1 8457 2975 6 ENSG00000161149.10 TUBA3FP chr22 21002895 21014292 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000150876.1 11398 2405 9 ENSG00000099957.15 P2RX6 chr22 21009808 21028830 + protein_coding KNOWN OTTHUMG00000150689.3 19023 4730 74 ENSG00000099960.11 SLC7A4 chr22 21028718 21032840 - protein_coding KNOWN OTTHUMG00000150896.1 4123 2447 12 ENSG00000226872.1 AC002472.11 chr22 21031357 21043969 + antisense NOVEL OTTHUMG00000150899.2 12613 563 3 ENSG00000224194.1 AC008278.3 chr2 15668684 15680484 - antisense NOVEL OTTHUMG00000151727.1 11801 568 3 ENSG00000207575.1 MIR649 chr22 21034176 21034272 - miRNA KNOWN NA 97 97 1 ENSG00000206145.7 P2RX6P chr22 21035243 21045017 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000150898.1 9775 551 7 ENSG00000187905.9 LRRC74B chr22 21045960 21064168 + protein_coding NOVEL OTTHUMG00000150897.3 18209 5542 31 ENSG00000249680.1 TUBA3GP chr22 21065460 21070097 + unprocessed_pseudogene KNOWN OTTHUMG00000150926.1 4638 1323 4 ENSG00000169668.10 BCRP2 chr22 21103016 21122285 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000150627.5 19270 5447 14 ENSG00000197210.7 KB-1592A4.15 chr22 21114607 21124451 - lincRNA NOVEL OTTHUMG00000150927.1 9845 4833 6 ENSG00000239511.2 POM121L7 chr22 21125660 21128063 - protein_coding KNOWN OTTHUMG00000150783.1 2404 2404 1 ENSG00000224688.1 E2F6P2 chr22 21141624 21142371 - processed_pseudogene KNOWN OTTHUMG00000150785.2 748 748 1 ENSG00000215498.7 FAM230B chr22 21167758 21302681 + processed_transcript KNOWN OTTHUMG00000150782.3 134924 7126 56 ENSG00000234503.1 KB-1592A4.14 chr22 21177892 21179875 - lincRNA NOVEL OTTHUMG00000150794.1 1984 774 2 ENSG00000231031.5 AC008271.1 chr2 15690782 15744339 + lincRNA NOVEL OTTHUMG00000151724.1 53558 2223 14 ENSG00000133475.15 GGT2 chr22 21207973 21227637 - protein_coding KNOWN OTTHUMG00000150617.6 19665 2367 40 ENSG00000226885.1 E2F6P3 chr22 21268161 21268903 + processed_pseudogene KNOWN OTTHUMG00000150760.1 743 743 1 ENSG00000229266.1 POM121L8P chr22 21282881 21284161 + processed_pseudogene KNOWN OTTHUMG00000150759.1 1281 1281 1 ENSG00000169662.8 BCRP6 chr22 21290760 21294586 - unprocessed_pseudogene KNOWN OTTHUMG00000150784.2 3827 632 5 ENSG00000206142.8 KB-1183D5.13 chr22 21300990 21325042 - lincRNA NOVEL OTTHUMG00000150795.1 24053 6336 55 ENSG00000237407.1 KB-1183D5.14 chr22 21312920 21314904 + lincRNA NOVEL OTTHUMG00000150793.1 1985 775 2 ENSG00000232771.2 PPP1R26P5 chr22 21341595 21345258 + processed_pseudogene KNOWN OTTHUMG00000150826.3 3664 3664 1 ENSG00000279920.1 KB-1183D5.18 chr22 21354563 21355763 + lincRNA NOVEL OTTHUMG00000189206.1 1201 350 2 ENSG00000226534.1 KB-1183D5.16 chr22 21370064 21371945 + processed_pseudogene KNOWN OTTHUMG00000150824.1 1882 689 4 ENSG00000273846.1 Metazoa_SRP chr22 21379382 21379701 - misc_RNA NOVEL NA 320 320 1 ENSG00000237326.1 AC113608.1 chr2 15801747 15810877 - lincRNA NOVEL OTTHUMG00000151723.1 9131 487 2 ENSG00000274600.1 RIMBP3B chr22 21383374 21389478 + protein_coding KNOWN OTTHUMG00000150819.2 6105 6105 1 ENSG00000200057.1 RN7SKP63 chr22 21389191 21389491 + misc_RNA KNOWN NA 301 301 1 ENSG00000252020.1 SCARNA17 chr22 21389796 21389938 - scaRNA NOVEL NA 143 143 1 ENSG00000275840.1 Metazoa_SRP chr22 21396273 21396590 - misc_RNA NOVEL NA 318 318 1 ENSG00000169635.8 HIC2 chr22 21417404 21451463 + protein_coding KNOWN OTTHUMG00000150781.3 34060 7219 8 ENSG00000276800.1 Metazoa_SRP chr22 21463963 21464279 + misc_RNA NOVEL NA 317 317 1 ENSG00000206140.8 TMEM191C chr22 21466423 21471269 + lincRNA KNOWN OTTHUMG00000150780.1 4847 4299 84 ENSG00000183506.15 PI4KAP2 chr22 21473000 21517533 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000150827.4 44534 7474 131 ENSG00000281629.1 Metazoa_SRP chr22 21538285 21538601 + misc_RNA NOVEL NA 317 317 1 ENSG00000252143.1 SCARNA17 chr22 21544897 21545039 + scaRNA NOVEL NA 143 143 1 ENSG00000271732.1 RP5-1182A14.5 chr1 16617391 16617729 + lincRNA NOVEL OTTHUMG00000185682.1 339 339 1 ENSG00000202160.1 RNU5E-7P chr2 15864935 15865051 + snRNA KNOWN NA 117 117 1 ENSG00000222352.1 RN7SKP221 chr22 21545344 21545644 - misc_RNA KNOWN NA 301 301 1 ENSG00000183246.6 RIMBP3C chr22 21545357 21551461 - protein_coding KNOWN OTTHUMG00000150825.1 6105 6105 2 ENSG00000185651.13 UBE2L3 chr22 21549447 21624034 + protein_coding KNOWN OTTHUMG00000150823.2 74588 3838 15 ENSG00000275293.1 Metazoa_SRP chr22 21555138 21555457 + misc_RNA NOVEL NA 320 320 1 ENSG00000161179.12 YDJC chr22 21628089 21630064 - protein_coding KNOWN OTTHUMG00000150822.1 1976 1754 27 ENSG00000161180.9 CCDC116 chr22 21632716 21637327 + protein_coding KNOWN OTTHUMG00000150821.2 4612 2949 12 ENSG00000273342.1 KB-1440D3.14 chr22 21640844 21641284 + lincRNA NOVEL OTTHUMG00000186182.1 441 441 1 ENSG00000128228.4 SDF2L1 chr22 21642261 21644298 + protein_coding KNOWN OTTHUMG00000150820.1 2038 1099 5 ENSG00000100023.16 PPIL2 chr22 21652270 21700015 + protein_coding KNOWN OTTHUMG00000030174.16 47746 8437 153 ENSG00000212102.1 MIR301B chr22 21652981 21653058 + miRNA KNOWN NA 78 78 1 ENSG00000214657.4 RP11-120J4.1 chr2 15869939 15870243 + processed_pseudogene KNOWN OTTHUMG00000157044.1 305 305 1 ENSG00000207751.1 MIR130B chr22 21653304 21653385 + miRNA KNOWN NA 82 82 1 ENSG00000272954.1 KB-1440D3.13 chr22 21661934 21662363 + sense_intronic NOVEL OTTHUMG00000186183.1 430 430 1 ENSG00000100027.13 YPEL1 chr22 21697544 21735834 - protein_coding KNOWN OTTHUMG00000150830.1 38291 4713 13 ENSG00000244671.3 RN7SL280P chr22 21722895 21723182 - misc_RNA KNOWN NA 288 288 1 ENSG00000100030.13 MAPK1 chr22 21754500 21867680 - protein_coding KNOWN OTTHUMG00000030508.2 113181 11336 26 ENSG00000200985.1 RNA5SP493 chr22 21792434 21792524 + rRNA KNOWN NA 91 91 1 ENSG00000225544.1 KB-1027C11.4 chr22 21885282 21885673 - processed_pseudogene KNOWN OTTHUMG00000150829.1 392 392 1 ENSG00000100034.12 PPM1F chr22 21919420 21952837 - protein_coding KNOWN OTTHUMG00000150835.11 33418 10083 41 ENSG00000224086.5 LL22NC03-86G7.1 chr22 21938293 21977632 + antisense NOVEL OTTHUMG00000153510.2 39340 37852 2 ENSG00000100038.18 TOP3B chr22 21957025 21982816 - protein_coding KNOWN OTTHUMG00000167438.1 25792 6641 135 ENSG00000238371.1 snoU13 chr2 15903669 15903772 + snoRNA NOVEL NA 104 104 1 ENSG00000197549.8 PRAMENP chr22 21991099 22043934 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000150836.4 52836 3039 15 ENSG00000253239.1 IGLVI-70 chr22 22026076 22026593 + IG_V_pseudogene KNOWN OTTHUMG00000150834.1 518 390 2 ENSG00000211637.2 IGLV4-69 chr22 22030934 22031472 + IG_V_gene KNOWN OTTHUMG00000150857.1 539 419 2 ENSG00000254355.1 IGLVI-68 chr22 22032745 22033194 + IG_V_pseudogene KNOWN OTTHUMG00000150853.1 450 345 2 ENSG00000278657.1 LL22NC03-23C6.13 chr22 22036344 22040065 + lincRNA NOVEL OTTHUMG00000150859.2 3722 780 2 ENSG00000249333.1 LL22NC03-23C6.12 chr22 22038643 22039126 + unprocessed_pseudogene KNOWN OTTHUMG00000150863.1 484 375 2 ENSG00000253794.1 IGLV10-67 chr22 22043618 22043942 + IG_V_pseudogene KNOWN OTTHUMG00000150849.1 325 325 1 ENSG00000228161.1 LL22NC03-23C6.15 chr22 22046430 22046591 + unprocessed_pseudogene KNOWN OTTHUMG00000150860.2 162 162 1 ENSG00000253874.1 IGLVIV-66-1 chr22 22058433 22058892 + IG_V_pseudogene KNOWN OTTHUMG00000150862.1 460 460 1 ENSG00000254075.1 IGLVV-66 chr22 22061077 22061538 + IG_V_pseudogene KNOWN OTTHUMG00000151584.2 462 341 2 ENSG00000223850.1 MYCNUT chr2 15920399 15936017 + lincRNA NOVEL OTTHUMG00000039578.3 15619 1039 3 ENSG00000254161.1 IGLVIV-65 chr22 22070225 22070707 + IG_V_pseudogene KNOWN OTTHUMG00000150861.2 483 360 2 ENSG00000253242.1 IGLVIV-64 chr22 22075366 22075666 + IG_V_pseudogene KNOWN OTTHUMG00000150852.2 301 301 1 ENSG00000253752.1 IGLVI-63 chr22 22079770 22080263 + IG_V_pseudogene KNOWN OTTHUMG00000150855.2 494 384 2 ENSG00000253823.1 IGLV1-62 chr22 22086561 22087110 + IG_V_pseudogene KNOWN OTTHUMG00000150848.1 550 441 2 ENSG00000275361.1 LL22NC03-88E1.18 chr22 22087924 22088085 + unprocessed_pseudogene KNOWN OTTHUMG00000188091.1 162 162 1 ENSG00000211638.2 IGLV8-61 chr22 22098700 22099212 + IG_V_gene KNOWN OTTHUMG00000150844.1 513 414 2 ENSG00000225741.1 LL22NC03-88E1.17 chr22 22103219 22104857 + unprocessed_pseudogene KNOWN OTTHUMG00000150843.1 1639 1262 2 ENSG00000263366.2 LL22NC03-33B6.4 chr22 22114844 22118005 - processed_pseudogene KNOWN OTTHUMG00000188359.1 3162 923 2 ENSG00000236118.1 LL22NC03-30E12.10 chr22 22155582 22155942 + unprocessed_pseudogene KNOWN OTTHUMG00000150845.2 361 281 2 ENSG00000233720.1 LL22NC03-30E12.11 chr22 22157382 22157631 + unprocessed_pseudogene KNOWN OTTHUMG00000150856.2 250 250 1 ENSG00000233718.4 MYCNOS chr2 15921037 15942249 - antisense KNOWN OTTHUMG00000151741.2 21213 2413 15 ENSG00000211639.2 IGLV4-60 chr22 22162199 22162681 + IG_V_gene KNOWN OTTHUMG00000150851.1 483 362 2 ENSG00000227710.1 LL22NC03-30E12.13 chr22 22168289 22168634 + unprocessed_pseudogene KNOWN OTTHUMG00000150858.1 346 346 1 ENSG00000224465.1 SOCS2P2 chr22 22170983 22171556 - processed_pseudogene KNOWN OTTHUMG00000150854.1 574 574 1 ENSG00000254308.1 IGLVIV-59 chr22 22179228 22179477 + IG_V_pseudogene KNOWN OTTHUMG00000150847.1 250 250 1 ENSG00000253637.1 IGLVV-58 chr22 22182582 22182885 + IG_V_pseudogene KNOWN OTTHUMG00000150893.1 304 304 1 ENSG00000236323.1 BMP6P1 chr22 22185941 22186619 + processed_pseudogene KNOWN OTTHUMG00000150994.1 679 679 1 ENSG00000211640.3 IGLV6-57 chr22 22195713 22196460 + IG_V_gene KNOWN OTTHUMG00000150996.4 748 623 2 ENSG00000253126.1 IGLVI-56 chr22 22198560 22199011 + IG_V_pseudogene KNOWN OTTHUMG00000151583.1 452 342 2 ENSG00000211641.2 IGLV11-55 chr22 22201663 22202206 + IG_V_gene KNOWN OTTHUMG00000150995.4 544 426 2 ENSG00000211642.2 IGLV10-54 chr22 22214794 22215270 + IG_V_gene KNOWN OTTHUMG00000150993.1 477 365 2 ENSG00000134323.10 MYCN chr2 15940564 15947007 + protein_coding KNOWN OTTHUMG00000039579.2 6444 2602 3 ENSG00000253935.1 IGLVIV-53 chr22 22219647 22220133 + IG_V_pseudogene KNOWN OTTHUMG00000151585.1 487 367 2 ENSG00000228050.1 TOP3BP1 chr22 22223187 22224566 - processed_pseudogene KNOWN OTTHUMG00000151044.1 1380 1380 1 ENSG00000234726.1 LL22NC03-123E1.5 chr22 22228719 22230469 - processed_pseudogene KNOWN OTTHUMG00000155637.1 1751 1242 2 ENSG00000169575.4 VPREB1 chr22 22244675 22245515 + protein_coding KNOWN OTTHUMG00000151042.2 841 755 4 ENSG00000279278.1 CH17-264L24.1 chr22 22264601 22273020 + lincRNA NOVEL OTTHUMG00000189235.1 8420 8420 1 ENSG00000274422.1 LL22NC03-2H8.5 chr22 22283928 22287220 - lincRNA NOVEL OTTHUMG00000188364.1 3293 3293 1 ENSG00000234630.1 LL22NC03-2H8.4 chr22 22293733 22294794 + lincRNA NOVEL OTTHUMG00000151038.1 1062 524 2 ENSG00000272779.1 LL22NC03-80A10.6 chr22 22303224 22310401 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000151046.3 7178 1121 8 ENSG00000236850.4 BMS1P20 chr22 22303224 22322847 + processed_transcript NOVEL OTTHUMG00000186398.2 19624 1776 10 ENSG00000211643.2 IGLV5-52 chr22 22318727 22319226 + IG_V_gene KNOWN OTTHUMG00000151049.1 500 379 2 ENSG00000243541.3 RN7SL104P chr2 15950689 15950981 - misc_RNA KNOWN NA 293 293 1 ENSG00000211644.2 IGLV1-51 chr22 22322472 22322980 + IG_V_gene KNOWN OTTHUMG00000151035.1 509 400 2 ENSG00000211645.2 IGLV1-50 chr22 22327300 22327814 + IG_V_gene KNOWN OTTHUMG00000151051.3 515 405 2 ENSG00000225724.1 LL22NC03-80A10.11 chr22 22339573 22341214 + unprocessed_pseudogene KNOWN OTTHUMG00000151037.2 1642 1642 1 ENSG00000223350.2 IGLV9-49 chr22 22343187 22343732 + IG_V_gene KNOWN OTTHUMG00000151045.2 546 409 2 ENSG00000232515.1 LL22NC03-75A1.9 chr22 22347807 22348164 + unprocessed_pseudogene KNOWN OTTHUMG00000151039.2 358 358 1 ENSG00000211647.1 IGLV5-48 chr22 22352940 22353433 + IG_V_gene KNOWN OTTHUMG00000151041.4 494 369 2 ENSG00000211648.2 IGLV1-47 chr22 22357739 22358260 + IG_V_gene KNOWN OTTHUMG00000151048.2 522 407 2 ENSG00000237428.1 LL22NC03-22A12.9 chr22 22366210 22367770 + processed_pseudogene KNOWN OTTHUMG00000151052.1 1561 1561 1 ENSG00000211649.3 IGLV7-46 chr22 22369614 22370087 + IG_V_gene KNOWN OTTHUMG00000151040.2 474 385 2 ENSG00000232603.1 LL22NC03-22A12.12 chr22 22370829 22371120 + unprocessed_pseudogene KNOWN OTTHUMG00000151055.1 292 292 1 ENSG00000226764.2 AC010145.4 chr2 15997049 16062885 - lincRNA NOVEL OTTHUMG00000151751.2 65837 516 3 ENSG00000211650.2 IGLV5-45 chr22 22375986 22376505 + IG_V_gene KNOWN OTTHUMG00000151054.3 520 397 2 ENSG00000211651.3 IGLV1-44 chr22 22380766 22381347 + IG_V_gene KNOWN OTTHUMG00000151050.2 582 467 2 ENSG00000211652.2 IGLV7-43 chr22 22395018 22395489 + IG_V_gene KNOWN OTTHUMG00000151053.1 472 385 2 ENSG00000254175.1 IGLVI-42 chr22 22397032 22397524 + IG_V_pseudogene KNOWN OTTHUMG00000151043.1 493 381 2 ENSG00000254073.1 IGLVVII-41-1 chr22 22398849 22398999 + IG_V_pseudogene KNOWN OTTHUMG00000151296.2 151 151 1 ENSG00000253818.1 IGLV1-41 chr22 22404207 22404721 + IG_V_pseudogene KNOWN OTTHUMG00000151056.1 515 406 2 ENSG00000211653.2 IGLV1-40 chr22 22409766 22410282 + IG_V_gene KNOWN OTTHUMG00000151072.1 517 407 2 ENSG00000224144.1 ASH2LP1 chr22 22420326 22421310 + processed_pseudogene KNOWN OTTHUMG00000151071.1 985 985 1 ENSG00000253889.1 IGLVI-38 chr22 22425821 22426314 + IG_V_pseudogene KNOWN OTTHUMG00000151073.2 494 385 2 ENSG00000211654.2 IGLV5-37 chr22 22427540 22428035 + IG_V_gene KNOWN OTTHUMG00000151069.1 496 374 2 ENSG00000236289.2 GACAT3 chr2 16050427 16085801 + lincRNA NOVEL OTTHUMG00000151744.2 35375 1330 7 ENSG00000211655.3 IGLV1-36 chr22 22431958 22432465 + IG_V_gene KNOWN OTTHUMG00000151074.2 508 393 2 ENSG00000230821.1 KB-288A10.17 chr22 22446686 22448336 + processed_pseudogene KNOWN OTTHUMG00000151070.1 1651 1651 1 ENSG00000253631.1 IGLV7-35 chr22 22450202 22450652 + IG_V_pseudogene KNOWN OTTHUMG00000151067.1 451 340 2 ENSG00000226595.1 KB-288A10.19 chr22 22465659 22465986 + unprocessed_pseudogene KNOWN OTTHUMG00000151068.1 328 328 1 ENSG00000275004.2 ZNF280B chr22 22484421 22509154 - protein_coding KNOWN OTTHUMG00000151066.5 24734 5723 11 ENSG00000169548.3 ZNF280A chr22 22513736 22520270 - protein_coding KNOWN OTTHUMG00000030545.4 6535 2148 2 ENSG00000185686.16 PRAME chr22 22547701 22559361 - protein_coding KNOWN OTTHUMG00000151172.2 11661 3775 64 ENSG00000220891.1 LL22NC03-63E9.3 chr22 22559343 22566602 + antisense NOVEL OTTHUMG00000151164.2 7260 3111 3 ENSG00000253120.1 IGLV2-34 chr22 22580014 22580296 + IG_V_pseudogene KNOWN OTTHUMG00000151174.3 283 283 1 ENSG00000211656.3 IGLV2-33 chr22 22588155 22588688 + IG_V_gene KNOWN OTTHUMG00000151178.3 534 412 2 ENSG00000236989.4 AC142119.1 chr2 16085222 16105841 - lincRNA NOVEL OTTHUMG00000151742.1 20620 1262 7 ENSG00000211657.3 IGLV3-32 chr22 22594528 22595056 + IG_V_gene KNOWN OTTHUMG00000151166.3 529 383 2 ENSG00000253920.1 IGLV3-31 chr22 22604445 22605165 + IG_V_pseudogene KNOWN OTTHUMG00000151179.1 721 297 2 ENSG00000253329.1 IGLV3-30 chr22 22618572 22619163 + IG_V_pseudogene KNOWN OTTHUMG00000151182.1 592 298 2 ENSG00000215456.5 BCRP4 chr22 22630061 22636153 + unprocessed_pseudogene KNOWN OTTHUMG00000151175.1 6093 826 7 ENSG00000183169.6 POM121L1P chr22 22639177 22644473 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000151169.2 5297 2375 3 ENSG00000100121.11 GGTLC2 chr22 22644475 22647903 + protein_coding KNOWN OTTHUMG00000151177.2 3429 1229 26 ENSG00000253338.1 IGLV3-29 chr22 22661299 22661542 + IG_V_pseudogene KNOWN OTTHUMG00000151168.1 244 244 1 ENSG00000207834.1 AC244250.2 chr22 22664428 22664523 + miRNA NOVEL NA 96 96 1 ENSG00000253451.1 IGLV2-28 chr22 22664473 22664907 + IG_V_pseudogene KNOWN OTTHUMG00000151183.1 435 304 2 ENSG00000211658.2 IGLV3-27 chr22 22668288 22668806 + IG_V_gene KNOWN OTTHUMG00000151171.1 519 377 2 ENSG00000215908.6 CROCCP2 chr1 16618262 16644683 - lincRNA NOVEL OTTHUMG00000037884.3 26422 4514 14 ENSG00000271315.1 WI2-2221J1.1 chr2 16149251 16149394 + processed_pseudogene KNOWN OTTHUMG00000184340.1 144 144 1 ENSG00000253913.1 IGLV3-26 chr22 22673152 22673602 + IG_V_pseudogene KNOWN OTTHUMG00000151211.1 451 302 2 ENSG00000253779.1 IGLVVI-25-1 chr22 22679097 22679345 + IG_V_pseudogene KNOWN OTTHUMG00000151586.1 249 249 1 ENSG00000211659.2 IGLV3-25 chr22 22686726 22687271 + IG_V_gene KNOWN OTTHUMG00000151221.2 546 380 2 ENSG00000232350.1 LL22NC03-102D1.16 chr22 22689831 22689978 + unprocessed_pseudogene KNOWN OTTHUMG00000151223.1 148 148 1 ENSG00000223999.1 LL22NC03-102D1.18 chr22 22692778 22693312 - lincRNA NOVEL OTTHUMG00000151209.1 535 451 2 ENSG00000253822.1 IGLV3-24 chr22 22694439 22694952 + IG_V_pseudogene KNOWN OTTHUMG00000151230.2 514 197 2 ENSG00000211660.3 IGLV2-23 chr22 22697789 22698407 + IG_V_gene KNOWN OTTHUMG00000151234.2 619 502 2 ENSG00000207830.1 AC244250.1 chr22 22697906 22698000 + miRNA NOVEL NA 95 95 1 ENSG00000253546.1 IGLVVI-22-1 chr22 22700760 22700970 + IG_V_pseudogene KNOWN OTTHUMG00000151219.1 211 211 1 ENSG00000211661.2 IGLV3-22 chr22 22704265 22704822 + IG_V_gene KNOWN OTTHUMG00000151229.2 558 409 2 ENSG00000251704.1 SNORA40 chr2 16199203 16199295 + snoRNA NOVEL NA 93 93 1 ENSG00000211662.2 IGLV3-21 chr22 22711689 22713203 + IG_V_gene KNOWN OTTHUMG00000151213.1 1515 602 3 ENSG00000254240.1 IGLVI-20 chr22 22715290 22715419 + IG_V_pseudogene KNOWN OTTHUMG00000151242.1 130 130 1 ENSG00000211663.2 IGLV3-19 chr22 22720623 22721145 + IG_V_gene KNOWN OTTHUMG00000151226.1 523 377 2 ENSG00000278667.1 LL22NC03-48A11.14 chr22 22730725 22731090 - processed_pseudogene KNOWN OTTHUMG00000188074.1 366 366 1 ENSG00000264629.1 AC244250.4 chr22 22734575 22734669 + miRNA NOVEL NA 95 95 1 ENSG00000211664.2 IGLV2-18 chr22 22734607 22735096 + IG_V_gene KNOWN OTTHUMG00000151232.1 490 374 2 ENSG00000254709.5 IGLL5 chr22 22734620 22896107 + protein_coding KNOWN OTTHUMG00000165670.2 161488 2472 55 ENSG00000253152.1 IGLV3-17 chr22 22738944 22739187 + IG_V_pseudogene KNOWN OTTHUMG00000151227.1 244 244 1 ENSG00000211665.2 IGLV3-16 chr22 22747383 22747911 + IG_V_gene KNOWN OTTHUMG00000151231.1 529 375 2 ENSG00000253786.1 IGLV3-15 chr22 22755554 22755797 + IG_V_pseudogene KNOWN OTTHUMG00000151210.2 244 244 1 ENSG00000226041.1 AC010745.1 chr2 16202430 16204226 + lincRNA NOVEL OTTHUMG00000151746.1 1797 637 3 ENSG00000207835.1 AC244250.3 chr22 22758696 22758790 + miRNA NOVEL NA 95 95 1 ENSG00000211666.2 IGLV2-14 chr22 22758700 22759218 + IG_V_gene KNOWN OTTHUMG00000151235.1 519 402 2 ENSG00000253590.1 IGLV3-13 chr22 22762294 22762516 + IG_V_pseudogene KNOWN OTTHUMG00000151215.2 223 223 1 ENSG00000211667.2 IGLV3-12 chr22 22771824 22772586 + IG_V_gene KNOWN OTTHUMG00000151233.1 763 360 2 ENSG00000231392.1 LL22NC03-24A12.8 chr22 22774529 22774691 + unprocessed_pseudogene KNOWN OTTHUMG00000151295.1 163 163 1 ENSG00000275772.1 LL22NC03-24A12.9 chr22 22785643 22787268 - processed_pseudogene KNOWN OTTHUMG00000188073.1 1626 1006 2 ENSG00000207833.1 AC244157.1 chr22 22792488 22792582 + miRNA NOVEL NA 95 95 1 ENSG00000211668.2 IGLV2-11 chr22 22792491 22793007 + IG_V_gene KNOWN OTTHUMG00000151236.1 517 400 2 ENSG00000274381.1 LL22NC03-84E4.13 chr22 22803076 22803360 + unprocessed_pseudogene KNOWN OTTHUMG00000188072.2 285 285 1 ENSG00000211669.2 IGLV3-10 chr22 22811747 22812285 + IG_V_gene KNOWN OTTHUMG00000151237.1 539 386 2 ENSG00000228876.1 AC010745.2 chr2 16224047 16229140 + lincRNA NOVEL OTTHUMG00000151750.1 5094 839 3 ENSG00000226477.1 LL22NC03-84E4.11 chr22 22814671 22814926 + unprocessed_pseudogene KNOWN OTTHUMG00000151241.1 256 256 1 ENSG00000211670.2 IGLV3-9 chr22 22819010 22819756 + IG_V_gene KNOWN OTTHUMG00000151239.1 747 461 2 ENSG00000278196.1 IGLV2-8 chr22 22822658 22823293 + IG_V_gene KNOWN OTTHUMG00000151240.3 636 521 2 ENSG00000207836.1 MIR650 chr22 22822776 22822871 + miRNA KNOWN NA 96 96 1 ENSG00000237127.1 LL22NC03-84E4.8 chr22 22834865 22835117 + unprocessed_pseudogene KNOWN OTTHUMG00000151228.1 253 253 1 ENSG00000254077.1 IGLV3-7 chr22 22838602 22838872 + IG_V_pseudogene KNOWN OTTHUMG00000151208.1 271 271 1 ENSG00000253448.1 IGLV3-6 chr22 22850375 22850624 + IG_V_pseudogene KNOWN OTTHUMG00000151222.1 250 250 1 ENSG00000207832.1 AC245028.1 chr22 22856545 22856638 + miRNA NOVEL NA 94 94 1 ENSG00000253234.1 IGLV2-5 chr22 22856762 22857038 + IG_V_pseudogene KNOWN OTTHUMG00000151216.1 277 277 1 ENSG00000226420.1 IGLV3-4 chr22 22858025 22858268 + IG_V_pseudogene KNOWN OTTHUMG00000151238.1 244 244 1 ENSG00000231266.1 AC010745.3 chr2 16227027 16228194 - lincRNA NOVEL OTTHUMG00000151749.1 1168 415 2 ENSG00000211672.2 IGLV4-3 chr22 22871507 22872035 + IG_V_gene KNOWN OTTHUMG00000151244.1 529 403 2 ENSG00000253963.1 IGLV3-2 chr22 22873212 22873440 + IG_V_pseudogene KNOWN OTTHUMG00000151212.1 229 229 1 ENSG00000211673.2 IGLV3-1 chr22 22880706 22881396 + IG_V_gene KNOWN OTTHUMG00000151224.2 691 398 2 ENSG00000264824.1 MIR5571 chr22 22886267 22886379 + miRNA KNOWN NA 113 113 1 ENSG00000211674.2 IGLJ1 chr22 22893692 22893818 + IG_J_gene KNOWN OTTHUMG00000151225.1 127 127 1 ENSG00000211675.2 IGLC1 chr22 22895375 22895834 + IG_C_gene KNOWN OTTHUMG00000151218.3 460 460 1 ENSG00000211676.2 IGLJ2 chr22 22899481 22899655 + IG_J_gene KNOWN OTTHUMG00000151243.1 175 175 1 ENSG00000211677.2 IGLC2 chr22 22900976 22901437 + IG_C_gene KNOWN OTTHUMG00000151214.3 462 462 1 ENSG00000211678.2 IGLJ3 chr22 22904850 22905025 + IG_J_gene KNOWN OTTHUMG00000151220.2 176 176 1 ENSG00000211679.2 IGLC3 chr22 22906342 22906803 + IG_C_gene KNOWN OTTHUMG00000151217.4 462 462 1 ENSG00000232444.1 AC010745.4 chr2 16316324 16319566 - lincRNA NOVEL OTTHUMG00000151743.1 3243 740 2 ENSG00000211680.2 IGLJ4 chr22 22910574 22910606 + IG_J_gene KNOWN OTTHUMG00000151184.1 33 33 1 ENSG00000254029.1 IGLC4 chr22 22910828 22911075 + IG_C_pseudogene KNOWN OTTHUMG00000151180.1 248 248 1 ENSG00000211681.2 IGLJ5 chr22 22914237 22914308 + IG_J_gene KNOWN OTTHUMG00000151170.2 72 72 1 ENSG00000254030.1 IGLC5 chr22 22915635 22915927 + IG_C_pseudogene KNOWN OTTHUMG00000151176.1 293 293 1 ENSG00000211682.2 IGLJ6 chr22 22918132 22918201 + IG_J_gene KNOWN OTTHUMG00000151181.1 70 70 1 ENSG00000222037.5 IGLC6 chr22 22919535 22919851 + IG_C_pseudogene KNOWN OTTHUMG00000151165.2 317 317 1 ENSG00000211684.2 IGLJ7 chr22 22921390 22921435 + IG_J_gene KNOWN OTTHUMG00000151167.2 46 46 1 ENSG00000211685.3 IGLC7 chr22 22922594 22923034 + IG_C_gene KNOWN OTTHUMG00000151017.6 441 441 1 ENSG00000237472.1 AP000361.2 chr22 22988263 22988581 + processed_pseudogene KNOWN OTTHUMG00000151014.1 319 319 1 ENSG00000223679.1 AP000362.1 chr22 22990690 23008356 + unprocessed_pseudogene KNOWN OTTHUMG00000155698.1 17667 258 3 ENSG00000224400.4 AC010880.1 chr2 16354256 16432702 + lincRNA NOVEL OTTHUMG00000151752.1 78447 477 7 ENSG00000100218.10 RSPH14 chr22 23059415 23145021 - protein_coding KNOWN OTTHUMG00000150602.3 85607 2436 19 ENSG00000128266.8 GNAZ chr22 23070361 23125037 + protein_coding KNOWN OTTHUMG00000150611.5 54677 3840 7 ENSG00000221069.1 AC000029.1 chr22 23136620 23136710 + miRNA NOVEL NA 91 91 1 ENSG00000275635.1 U7 chr22 23137805 23137864 - snRNA NOVEL NA 60 60 1 ENSG00000100228.11 RAB36 chr22 23145326 23164350 + protein_coding KNOWN OTTHUMG00000150601.1 19025 4107 25 ENSG00000186716.18 BCR chr22 23179704 23318037 + protein_coding KNOWN OTTHUMG00000150655.3 138334 12389 113 ENSG00000236794.5 BCRP8 chr22 23179918 23180172 - processed_pseudogene KNOWN OTTHUMG00000155712.2 255 255 1 ENSG00000240160.3 RN7SL263P chr22 23261782 23262071 - misc_RNA KNOWN NA 290 290 1 ENSG00000230701.2 FBXW4P1 chr22 23262767 23265005 + processed_pseudogene KNOWN OTTHUMG00000030931.9 2239 2239 1 ENSG00000214526.3 AP000343.1 chr22 23322543 23322927 - processed_pseudogene KNOWN OTTHUMG00000150656.1 385 385 1 ENSG00000237633.2 AC104623.2 chr2 16523176 16529387 + antisense NOVEL OTTHUMG00000151748.1 6212 691 5 ENSG00000236611.1 AP000343.2 chr22 23326616 23328493 + lincRNA NOVEL OTTHUMG00000150838.1 1878 346 2 ENSG00000215478.7 CES5AP1 chr22 23359603 23387731 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000150651.3 28129 1560 22 ENSG00000133519.11 ZDHHC8P1 chr22 23390606 23402726 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000150650.1 12121 3269 22 ENSG00000248409.1 KB-1269D1.8 chr22 23392771 23393839 + unprocessed_pseudogene KNOWN OTTHUMG00000155750.1 1069 629 5 ENSG00000234928.1 AP000344.3 chr22 23433564 23435071 + lincRNA NOVEL OTTHUMG00000150668.1 1508 1083 5 ENSG00000227755.1 AP000344.4 chr22 23446598 23460833 + transcribed_processed_pseudogene KNOWN OTTHUMG00000150667.2 14236 795 5 ENSG00000178248.11 AP000345.1 chr22 23462086 23486980 - lincRNA NOVEL OTTHUMG00000150669.2 24895 1578 12 ENSG00000225413.2 AP000345.4 chr22 23512494 23513602 - lincRNA NOVEL OTTHUMG00000150840.2 1109 477 2 ENSG00000280623.1 PCAT14 chr22 23536881 23547797 + lincRNA KNOWN OTTHUMG00000189569.1 10917 4911 7 ENSG00000224277.4 AP000345.2 chr22 23567064 23573507 + antisense NOVEL OTTHUMG00000150666.1 6444 612 9 ENSG00000279663.1 AC104623.1 chr2 16541690 16545695 - pseudogene KNOWN NA 4006 4002 2 ENSG00000128322.6 IGLL1 chr22 23573125 23580308 - protein_coding KNOWN OTTHUMG00000150673.1 7184 904 8 ENSG00000272733.1 KB-208E9.1 chr22 23580880 23583859 - lincRNA NOVEL OTTHUMG00000186121.1 2980 1081 3 ENSG00000278655.1 KB-1572G7.5 chr22 23607041 23608407 + unprocessed_pseudogene KNOWN OTTHUMG00000188069.1 1367 381 2 ENSG00000189269.11 DRICH1 chr22 23608452 23632321 - protein_coding KNOWN OTTHUMG00000186352.1 23870 1302 23 ENSG00000275609.1 KB-1572G7.4 chr22 23610329 23610538 + processed_pseudogene KNOWN OTTHUMG00000188070.1 210 210 1 ENSG00000211683.3 KB-1572G7.3 chr22 23630618 23638941 - processed_transcript NOVEL OTTHUMG00000150710.4 8324 1087 6 ENSG00000228315.10 GUSBP11 chr22 23638487 23717356 - processed_transcript NOVEL OTTHUMG00000150709.2 78870 6550 53 ENSG00000234353.2 AP000347.4 chr22 23638492 23640762 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000150708.3 2271 906 4 ENSG00000244723.3 ASLP1 chr22 23649213 23653334 - unprocessed_pseudogene KNOWN OTTHUMG00000150707.1 4122 637 6 ENSG00000273000.4 KB-1572G7.2 chr22 23652860 23717347 - processed_transcript NOVEL OTTHUMG00000186001.1 64488 3126 20 ENSG00000197872.10 FAM49A chr2 16549459 16666331 - protein_coding KNOWN OTTHUMG00000090615.2 116873 5448 39 ENSG00000272578.4 AP000347.2 chr22 23658094 23717356 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000186353.2 59263 7012 32 ENSG00000159496.13 RGL4 chr22 23688136 23699176 + protein_coding KNOWN OTTHUMG00000150711.2 11041 4715 100 ENSG00000187792.4 ZNF70 chr22 23738678 23751092 - protein_coding KNOWN OTTHUMG00000150739.2 12415 6924 2 ENSG00000128218.7 VPREB3 chr22 23752743 23754468 - protein_coding KNOWN OTTHUMG00000150738.2 1726 610 4 ENSG00000169314.13 C22orf15 chr22 23763021 23765861 + protein_coding KNOWN OTTHUMG00000150740.2 2841 2086 23 ENSG00000250479.7 CHCHD10 chr22 23765834 23768443 - protein_coding KNOWN OTTHUMG00000150736.2 2610 1360 17 ENSG00000099953.8 MMP11 chr22 23768226 23784316 + protein_coding KNOWN OTTHUMG00000150742.2 16091 5176 56 ENSG00000280178.1 AP000349.2 chr22 23782283 23783958 - protein_coding KNOWN NA 1676 747 3 ENSG00000099956.16 SMARCB1 chr22 23786963 23834516 + protein_coding KNOWN OTTHUMG00000150737.7 47554 2481 44 ENSG00000099958.13 DERL3 chr22 23834503 23839128 - protein_coding KNOWN OTTHUMG00000150743.2 4626 3796 45 ENSG00000186301.8 MST1P2 chr1 16645622 16650289 + unprocessed_pseudogene KNOWN OTTHUMG00000057487.4 4668 2291 18 ENSG00000223536.4 AC008069.1 chr2 16728124 16767555 + lincRNA NOVEL OTTHUMG00000151740.1 39432 710 5 ENSG00000272973.1 KB-1125A3.11 chr22 23856427 23857039 - antisense NOVEL OTTHUMG00000186120.1 613 613 1 ENSG00000133460.18 SLC2A11 chr22 23856703 23886309 + protein_coding KNOWN OTTHUMG00000166469.2 29607 8890 157 ENSG00000251357.4 AP000350.10 chr22 23862188 23895223 + protein_coding PUTATIVE OTTHUMG00000150787.3 33036 788 6 ENSG00000279467.1 KB-1125A3.12 chr22 23865248 23873277 - antisense NOVEL OTTHUMG00000189174.1 8030 8030 1 ENSG00000244425.3 RN7SL268P chr22 23879493 23879790 - misc_RNA KNOWN NA 298 298 1 ENSG00000240972.1 MIF chr22 23894004 23895227 + protein_coding KNOWN OTTHUMG00000150773.2 1224 1109 7 ENSG00000218537.1 MIF-AS1 chr22 23894426 23898930 - antisense KNOWN OTTHUMG00000150772.2 4505 1476 3 ENSG00000273295.1 AP000350.5 chr22 23901432 23907068 - lincRNA NOVEL OTTHUMG00000150777.2 5637 5637 1 ENSG00000277002.1 AP000350.1 chr22 23903381 23903455 + miRNA NOVEL NA 75 75 1 ENSG00000225282.1 AP000350.6 chr22 23926900 23929574 + processed_pseudogene KNOWN OTTHUMG00000150775.1 2675 1763 3 ENSG00000224604.1 AC008069.2 chr2 16853820 16855284 - processed_pseudogene KNOWN OTTHUMG00000151747.1 1465 950 2 ENSG00000206090.4 AP000350.7 chr22 23939998 23942798 + unprocessed_pseudogene KNOWN OTTHUMG00000150771.1 2801 532 3 ENSG00000231271.1 AP000350.8 chr22 23949918 23954042 + unprocessed_pseudogene KNOWN OTTHUMG00000150776.1 4125 289 3 ENSG00000133433.9 GSTT2B chr22 23957414 23961186 - protein_coding KNOWN OTTHUMG00000150774.2 3773 1099 10 ENSG00000228039.3 KB-1125A3.10 chr22 23963780 23964374 + processed_pseudogene KNOWN OTTHUMG00000166616.2 595 254 2 ENSG00000099974.7 DDTL chr22 23966901 23972532 + protein_coding KNOWN OTTHUMG00000150800.1 5632 1545 3 ENSG00000272787.1 KB-226F1.2 chr22 23969211 23969873 + lincRNA NOVEL OTTHUMG00000186175.1 663 663 1 ENSG00000099977.12 DDT chr22 23971365 23980469 - protein_coding KNOWN OTTHUMG00000150798.3 9105 1753 22 ENSG00000250470.1 AP000351.3 chr22 23976904 23977585 - unprocessed_pseudogene KNOWN OTTHUMG00000150799.2 682 347 2 ENSG00000099984.9 GSTT2 chr22 23980123 23983911 + polymorphic_pseudogene KNOWN OTTHUMG00000150786.4 3789 1115 11 ENSG00000224205.1 AP000351.4 chr22 23987320 23991421 - unprocessed_pseudogene KNOWN OTTHUMG00000150801.1 4102 315 3 ENSG00000237670.1 AC080094.1 chr2 16970034 16974497 + lincRNA NOVEL OTTHUMG00000151745.1 4464 201 3 ENSG00000276950.3 GSTTP2 chr22 23998401 24005453 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000150811.5 7053 2028 22 ENSG00000235689.1 AP000351.13 chr22 24006305 24008258 - unprocessed_pseudogene KNOWN OTTHUMG00000150812.1 1954 267 3 ENSG00000099991.15 CABIN1 chr22 24011192 24178628 + protein_coding KNOWN OTTHUMG00000150797.5 167437 9388 201 ENSG00000232545.1 KB-318B8.7 chr22 24101689 24103354 + sense_intronic NOVEL OTTHUMG00000150809.1 1666 558 3 ENSG00000099994.10 SUSD2 chr22 24181259 24189110 + protein_coding KNOWN OTTHUMG00000150792.1 7852 5279 26 ENSG00000099998.16 GGT5 chr22 24219654 24245142 - protein_coding KNOWN OTTHUMG00000150796.2 25489 6054 44 ENSG00000230712.2 AP000354.4 chr22 24248074 24249466 - unprocessed_pseudogene KNOWN OTTHUMG00000150766.1 1393 664 5 ENSG00000128262.7 POM121L9P chr22 24251828 24265525 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000150763.2 13698 5137 12 ENSG00000225098.1 BCRP1 chr22 24259929 24263764 - unprocessed_pseudogene KNOWN OTTHUMG00000150768.1 3836 691 5 ENSG00000215464.4 AP000354.2 chr22 24269346 24270134 - processed_pseudogene KNOWN OTTHUMG00000150770.2 789 456 2 ENSG00000222842.1 RN7SKP168 chr2 17122841 17123140 - misc_RNA KNOWN NA 300 300 1 ENSG00000100014.18 SPECC1L chr22 24270817 24417740 + protein_coding KNOWN OTTHUMG00000171450.5 146924 7324 65 ENSG00000258555.4 SPECC1L-ADORA2A chr22 24270898 24442356 + protein_coding NOVEL OTTHUMG00000150762.5 171459 6204 20 ENSG00000280413.1 KB-1674E1.1 chr22 24295244 24300054 + sense_intronic NOVEL OTTHUMG00000189220.1 4811 4811 1 ENSG00000279424.1 KB-1674E1.2 chr22 24360531 24362064 + sense_intronic NOVEL OTTHUMG00000189221.1 1534 1534 1 ENSG00000128271.18 ADORA2A chr22 24417879 24442360 + protein_coding KNOWN OTTHUMG00000150761.4 24482 4193 41 ENSG00000178803.9 ADORA2A-AS1 chr22 24429206 24495074 - antisense KNOWN OTTHUMG00000150735.5 65869 4025 18 ENSG00000100024.13 UPB1 chr22 24494107 24528390 + protein_coding KNOWN OTTHUMG00000150749.2 34284 6793 30 ENSG00000228923.1 AP000355.2 chr22 24516508 24518386 + antisense NOVEL OTTHUMG00000150750.1 1879 480 2 ENSG00000138867.15 GUCD1 chr22 24540423 24555935 - protein_coding KNOWN OTTHUMG00000150728.2 15513 4529 57 ENSG00000100028.10 SNRPD3 chr22 24555503 24609980 + protein_coding KNOWN OTTHUMG00000150727.1 54478 2544 25 ENSG00000214843.3 ZFYVE9P2 chr2 17284292 17284895 + processed_pseudogene KNOWN OTTHUMG00000151762.1 604 604 1 ENSG00000100031.17 GGT1 chr22 24583750 24629005 + protein_coding KNOWN OTTHUMG00000030859.31 45256 4434 204 ENSG00000178026.11 LRRC75B chr22 24585620 24593208 - protein_coding KNOWN OTTHUMG00000150729.1 7589 3422 31 ENSG00000230947.2 AP000356.2 chr22 24598054 24599398 + sense_intronic NOVEL OTTHUMG00000150625.2 1345 364 2 ENSG00000215481.7 BCRP3 chr22 24632915 24653356 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000150726.5 20442 2751 22 ENSG00000224124.3 POM121L10P chr22 24657481 24658765 - processed_pseudogene KNOWN OTTHUMG00000150732.1 1285 1285 1 ENSG00000224806.2 ARL5AP4 chr22 24686168 24686679 + processed_pseudogene KNOWN OTTHUMG00000155636.1 512 512 1 ENSG00000224334.1 AP000357.4 chr22 24686923 24688087 + processed_pseudogene KNOWN OTTHUMG00000150733.1 1165 1165 1 ENSG00000237601.1 AP000358.5 chr22 24703348 24703503 + processed_pseudogene KNOWN OTTHUMG00000155630.1 156 156 1 ENSG00000182351.7 CRIP1P4 chr22 24712292 24712520 + processed_pseudogene KNOWN OTTHUMG00000150730.1 229 229 1 ENSG00000184571.12 PIWIL3 chr22 24719034 24774720 - protein_coding KNOWN OTTHUMG00000150788.3 55687 3803 106 ENSG00000236348.1 PSMC1P10 chr2 17385091 17386417 + processed_pseudogene KNOWN OTTHUMG00000151763.1 1327 1327 1 ENSG00000167037.17 SGSM1 chr22 24806169 24927578 + protein_coding KNOWN OTTHUMG00000150837.1 121410 8607 125 ENSG00000199783.1 SNORD56 chr22 24901147 24901214 - snoRNA NOVEL NA 68 68 1 ENSG00000206069.5 TMEM211 chr22 24935110 24946695 - protein_coding KNOWN OTTHUMG00000150790.2 11586 950 7 ENSG00000197077.11 KIAA1671 chr22 24952730 25197448 + protein_coding KNOWN OTTHUMG00000150841.8 244719 15818 41 ENSG00000279085.1 CTA-243E7.4 chr22 25009685 25015072 - antisense NOVEL OTTHUMG00000189171.1 5388 5388 1 ENSG00000279548.1 CTA-243E7.3 chr22 25022594 25024652 - antisense NOVEL OTTHUMG00000189172.1 2059 2059 1 ENSG00000279006.1 CTA-243E7.2 chr22 25048967 25051966 - antisense NOVEL OTTHUMG00000189170.1 3000 3000 1 ENSG00000279110.1 CTA-243E7.1 chr22 25052122 25065241 - antisense NOVEL OTTHUMG00000189169.1 13120 13120 1 ENSG00000203280.4 CTA-221G9.12 chr22 25102433 25112692 - antisense NOVEL OTTHUMG00000150908.3 10260 957 5 ENSG00000271181.1 CTA-221G9.10 chr22 25179309 25179554 - processed_pseudogene KNOWN OTTHUMG00000150902.2 246 246 1 ENSG00000214842.5 RAD51AP2 chr2 17510584 17518439 - protein_coding KNOWN OTTHUMG00000151761.3 7856 3724 3 ENSG00000100053.8 CRYBB3 chr22 25199850 25207363 + protein_coding KNOWN OTTHUMG00000150869.1 7514 867 11 ENSG00000236641.1 CTA-221G9.7 chr22 25212742 25213685 + lincRNA NOVEL OTTHUMG00000150865.1 944 482 2 ENSG00000244752.2 CRYBB2 chr22 25219522 25231869 + protein_coding KNOWN OTTHUMG00000150905.1 12348 886 6 ENSG00000278125.1 Z99916.1 chr22 25227787 25227852 + miRNA NOVEL NA 66 66 1 ENSG00000279298.1 CTA-221G9.11 chr22 25251523 25252602 - lincRNA NOVEL OTTHUMG00000189168.1 1080 1080 1 ENSG00000233577.5 RP3-462D8.2 chr22 25279529 25282674 - lincRNA NOVEL OTTHUMG00000150906.2 3146 593 5 ENSG00000206066.3 IGLL3P chr22 25318256 25320080 + unprocessed_pseudogene KNOWN OTTHUMG00000150866.2 1825 434 2 ENSG00000230637.2 CTA-246H3.8 chr22 25327252 25339975 + unprocessed_pseudogene KNOWN OTTHUMG00000150868.1 12724 663 4 ENSG00000231466.2 CTA-246H3.11 chr22 25349543 25350322 - processed_pseudogene KNOWN OTTHUMG00000155629.1 780 780 1 ENSG00000100068.10 LRP5L chr22 25351418 25405377 - protein_coding KNOWN OTTHUMG00000150900.2 53960 4555 35 ENSG00000163032.10 VSNL1 chr2 17539126 17657018 + protein_coding KNOWN OTTHUMG00000090645.4 117893 3833 22 ENSG00000272942.1 CTA-246H3.12 chr22 25434324 25435070 - lincRNA NOVEL OTTHUMG00000186164.1 747 747 1 ENSG00000272798.1 CTA-390C10.9 chr22 25436312 25436915 + lincRNA NOVEL OTTHUMG00000186165.1 604 604 1 ENSG00000271138.1 IGLVIVOR22-1 chr22 25437306 25437823 - IG_V_pseudogene KNOWN OTTHUMG00000184784.1 518 397 2 ENSG00000100058.11 CRYBB2P1 chr22 25448105 25520854 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000150874.3 72750 6435 21 ENSG00000277872.1 MIR6817 chr22 25455646 25455711 + miRNA KNOWN NA 66 66 1 ENSG00000272977.1 CTA-390C10.10 chr22 25476218 25479971 + sense_intronic NOVEL OTTHUMG00000186166.2 3754 3754 1 ENSG00000265978.1 AL008721.1 chr22 25532720 25532809 - miRNA NOVEL NA 90 90 1 ENSG00000234884.1 CTA-407F11.8 chr22 25561117 25564462 - antisense NOVEL OTTHUMG00000150903.1 3346 939 7 ENSG00000100077.13 ADRBK2 chr22 25564849 25729294 + protein_coding KNOWN OTTHUMG00000150280.5 164446 9303 53 ENSG00000237387.1 CTA-407F11.7 chr22 25580241 25581382 - antisense NOVEL OTTHUMG00000150901.1 1142 660 2 ENSG00000163029.14 SMC6 chr2 17663812 17800242 - protein_coding KNOWN OTTHUMG00000090675.5 136431 9824 138 ENSG00000224003.1 YES1P1 chr22 25647261 25649232 + processed_pseudogene KNOWN OTTHUMG00000150872.1 1972 1628 2 ENSG00000222585.1 RNA5SP494 chr22 25715041 25715169 - rRNA KNOWN NA 129 129 1 ENSG00000133454.14 MYO18B chr22 25742144 26031041 + protein_coding KNOWN OTTHUMG00000151129.2 288898 9706 229 ENSG00000278960.1 CTA-407F11.9 chr22 25756318 25756669 - antisense NOVEL OTTHUMG00000189167.1 352 352 1 ENSG00000231933.6 CTA-125H2.2 chr22 25876854 25903247 - antisense NOVEL OTTHUMG00000150907.4 26394 6326 89 ENSG00000264925.1 Z98949.1 chr22 25883074 25883161 - miRNA NOVEL NA 88 88 1 ENSG00000232464.1 CTA-125H2.1 chr22 25959074 25983526 - antisense NOVEL OTTHUMG00000150904.1 24453 472 2 ENSG00000223056.1 RN7SKP169 chr22 25963983 25964273 - misc_RNA KNOWN NA 291 291 1 ENSG00000232050.1 CTA-125H2.3 chr22 26006389 26006532 - processed_pseudogene KNOWN OTTHUMG00000155628.1 144 144 1 ENSG00000280065.1 CTA-796E4.5 chr22 26056135 26087851 + lincRNA NOVEL OTTHUMG00000189225.1 31717 31717 1 ENSG00000178295.13 GEN1 chr2 17753858 17788941 + protein_coding KNOWN OTTHUMG00000121173.3 35084 11827 51 ENSG00000236464.1 CTA-796E4.3 chr22 26161834 26164303 + lincRNA NOVEL OTTHUMG00000151344.1 2470 188 2 ENSG00000229770.1 CTA-796E4.4 chr22 26161910 26163214 - antisense NOVEL OTTHUMG00000151345.1 1305 357 3 ENSG00000100095.17 SEZ6L chr22 26169474 26383597 + protein_coding KNOWN OTTHUMG00000150870.4 214124 7149 132 ENSG00000224192.2 RP11-259P1.1 chr22 26241331 26254092 - antisense NOVEL OTTHUMG00000151346.2 12762 535 5 ENSG00000252267.1 RNA5SP495 chr22 26390667 26390776 - rRNA KNOWN NA 110 110 1 ENSG00000280246.1 RP3-341O5.3 chr22 26390740 26394853 - lincRNA NOVEL OTTHUMG00000189166.1 4114 4114 1 ENSG00000230203.1 CTB-1048E9.7 chr22 26422071 26423193 - processed_pseudogene KNOWN OTTHUMG00000150886.1 1123 807 2 ENSG00000128203.6 ASPHD2 chr22 26429273 26445015 + protein_coding KNOWN OTTHUMG00000150884.1 15743 3357 4 ENSG00000100099.19 HPS4 chr22 26443423 26483837 - protein_coding KNOWN OTTHUMG00000030459.7 40415 10782 149 ENSG00000100104.11 SRRD chr22 26483877 26494658 + protein_coding KNOWN OTTHUMG00000150885.4 10782 4319 23 ENSG00000207513.1 RNU1-3 chr1 16666785 16666948 - snRNA KNOWN NA 164 164 1 ENSG00000151379.3 MSGN1 chr2 17816496 17817101 + protein_coding KNOWN OTTHUMG00000159089.1 606 606 1 ENSG00000100109.15 TFIP11 chr22 26491225 26512505 - protein_coding KNOWN OTTHUMG00000150883.2 21281 5436 120 ENSG00000261188.1 CTA-445C9.14 chr22 26512537 26514568 + antisense NOVEL OTTHUMG00000172738.1 2032 2032 3 ENSG00000128294.14 TPST2 chr22 26521983 26596717 - protein_coding KNOWN OTTHUMG00000150987.4 74735 6957 39 ENSG00000221760.1 MIR548J chr22 26555212 26555323 - miRNA KNOWN NA 112 112 1 ENSG00000213707.2 HMGB1P10 chr22 26560526 26561088 + processed_pseudogene KNOWN OTTHUMG00000150984.1 563 563 1 ENSG00000100122.5 CRYBB1 chr22 26599278 26618088 - protein_coding KNOWN OTTHUMG00000150980.1 18811 1102 6 ENSG00000196431.3 CRYBA4 chr22 26621964 26630672 + protein_coding KNOWN OTTHUMG00000150983.2 8709 811 11 ENSG00000226912.1 ISCA2P1 chr22 26644889 26645336 - processed_pseudogene KNOWN OTTHUMG00000150978.1 448 448 1 ENSG00000225783.5 MIAT chr22 26646428 26676475 + lincRNA KNOWN OTTHUMG00000150985.4 30048 11505 73 ENSG00000278404.1 MIAT_exon1 chr22 26657521 26657655 + misc_RNA NOVEL NA 135 135 1 ENSG00000170745.10 KCNS3 chr2 17877847 18361616 + protein_coding KNOWN OTTHUMG00000044150.4 483770 3131 17 ENSG00000206028.1 CTA-373H7.7 chr22 26667693 26672654 - lincRNA NOVEL OTTHUMG00000150982.1 4962 2613 3 ENSG00000277941.1 MIAT_exon5_1 chr22 26671402 26671550 + misc_RNA NOVEL NA 149 149 1 ENSG00000275942.1 MIAT_exon5_2 chr22 26672164 26672248 + misc_RNA NOVEL NA 85 85 1 ENSG00000244625.4 MIATNB chr22 26672767 26780207 + lincRNA NOVEL OTTHUMG00000150981.3 107441 2847 38 ENSG00000276991.1 MIAT_exon5_3 chr22 26673254 26673630 + misc_RNA NOVEL NA 377 377 1 ENSG00000223704.1 LINC01422 chr22 26858634 26865786 + lincRNA NOVEL OTTHUMG00000150979.1 7153 6043 3 ENSG00000231369.1 RP1-40G4P.1 chr22 26886909 26887548 - processed_pseudogene KNOWN OTTHUMG00000150977.1 640 578 2 ENSG00000235271.4 RP1-90L6.3 chr22 26903292 26920611 + lincRNA NOVEL OTTHUMG00000151357.1 17320 744 6 ENSG00000279440.1 CTA-992D9.11 chr22 27019369 27024550 + lincRNA NOVEL OTTHUMG00000189177.1 5182 5182 1 ENSG00000200443.1 RNU6-1066P chr22 27035887 27035991 + snRNA KNOWN NA 105 105 1 ENSG00000212455.1 SNORA40 chr2 18040606 18040733 - snoRNA NOVEL NA 128 128 1 ENSG00000279914.1 CTA-992D9.10 chr22 27040197 27041494 + lincRNA NOVEL OTTHUMG00000189178.1 1298 1298 1 ENSG00000279848.1 CTA-992D9.9 chr22 27044001 27045315 + lincRNA NOVEL OTTHUMG00000189179.1 1315 1315 1 ENSG00000236858.1 CTA-992D9.6 chr22 27048144 27060518 - lincRNA NOVEL OTTHUMG00000150953.1 12375 2383 2 ENSG00000280025.1 CTA-992D9.8 chr22 27102766 27107019 + lincRNA NOVEL OTTHUMG00000189180.1 4254 4254 1 ENSG00000231405.1 CTA-992D9.7 chr22 27143478 27159878 + lincRNA NOVEL OTTHUMG00000150945.1 16401 473 2 ENSG00000238195.1 CTA-503F6.2 chr22 27204211 27205126 + lincRNA NOVEL OTTHUMG00000150949.1 916 308 2 ENSG00000233521.4 RP5-1172A22.1 chr22 27221349 27224727 - lincRNA NOVEL OTTHUMG00000150955.1 3379 975 6 ENSG00000233574.1 CTA-929C8.5 chr22 27276240 27286349 + lincRNA NOVEL OTTHUMG00000150952.1 10110 274 3 ENSG00000223726.1 CTA-929C8.7 chr22 27307483 27318538 - lincRNA NOVEL OTTHUMG00000150956.1 11056 578 3 ENSG00000226741.1 CTA-929C8.6 chr22 27310651 27317456 + lincRNA NOVEL OTTHUMG00000150947.1 6806 5052 2 ENSG00000260331.1 RP11-111J6.2 chr2 18547386 18548204 - lincRNA NOVEL OTTHUMG00000175734.1 819 819 1 ENSG00000230051.1 CTA-929C8.8 chr22 27331787 27379265 + lincRNA NOVEL OTTHUMG00000150950.1 47479 571 4 ENSG00000279185.1 CTA-929C8.9 chr22 27353442 27378438 + sense_intronic NOVEL OTTHUMG00000189226.1 24997 24997 1 ENSG00000280445.1 RP1-205F14P.1 chr22 27414462 27419713 - lincRNA NOVEL OTTHUMG00000189165.2 5252 1044 3 ENSG00000227880.1 RP11-46E17.6 chr22 27457247 27460060 - lincRNA NOVEL OTTHUMG00000150954.1 2814 770 2 ENSG00000280391.1 RP11-46E17.8 chr22 27514067 27523265 + lincRNA NOVEL OTTHUMG00000189227.1 9199 9199 1 ENSG00000224027.1 RP1-231P7P.1 chr22 27563839 27573573 - lincRNA NOVEL OTTHUMG00000150951.1 9735 577 3 ENSG00000227838.1 RP1-213J1P__B.1 chr22 27676559 27714970 - lincRNA NOVEL OTTHUMG00000150948.1 38412 819 5 ENSG00000231495.1 RP1-213J1P__B.2 chr22 27707580 27709931 + lincRNA NOVEL OTTHUMG00000150946.1 2352 115 2 ENSG00000226169.1 RP11-375H17.1 chr22 27716480 27721677 + antisense NOVEL OTTHUMG00000150974.1 5198 451 2 ENSG00000169184.5 MN1 chr22 27748277 27801498 - protein_coding KNOWN OTTHUMG00000150975.1 53222 7693 7 ENSG00000240857.1 RDH14 chr2 18554723 18560680 - protein_coding KNOWN OTTHUMG00000090705.2 5958 1587 4 ENSG00000180957.16 PITPNB chr22 27851669 27920134 - protein_coding KNOWN OTTHUMG00000150976.4 68466 5129 71 ENSG00000235954.5 TTC28-AS1 chr22 27919376 28008581 + processed_transcript KNOWN OTTHUMG00000150973.1 89206 10818 71 ENSG00000277460.1 TTC28-AS1_1 chr22 27919384 27919545 + misc_RNA NOVEL NA 162 162 1 ENSG00000264073.1 MIR3199-2 chr22 27920525 27920612 - miRNA KNOWN NA 88 88 1 ENSG00000276150.1 TTC28-AS1_2 chr22 27922022 27922178 + misc_RNA NOVEL NA 157 157 1 ENSG00000100154.13 TTC28 chr22 27978014 28679865 - protein_coding KNOWN OTTHUMG00000151006.4 701852 12645 65 ENSG00000274342.1 TTC28-AS1_3 chr22 27994474 27994654 + misc_RNA NOVEL NA 181 181 1 ENSG00000276675.1 TTC28-AS1_4 chr22 28002484 28002595 + misc_RNA NOVEL NA 112 112 1 ENSG00000239249.3 RN7SL757P chr22 28056153 28056453 - misc_RNA KNOWN NA 301 301 1 ENSG00000279802.1 CTA-544A11.1 chr22 28220486 28232600 + antisense NOVEL OTTHUMG00000189215.1 12115 12115 1 ENSG00000250741.5 NT5C1B-RDH14 chr2 18555545 18589564 - protein_coding KNOWN OTTHUMG00000161546.2 34020 2150 20 ENSG00000201209.1 SNORD42 chr22 28232756 28232823 - snoRNA NOVEL NA 68 68 1 ENSG00000199797.1 Y_RNA chr22 28303754 28303850 + misc_RNA NOVEL NA 97 97 1 ENSG00000280258.1 CTA-732E4.1 chr22 28398572 28404581 + antisense NOVEL OTTHUMG00000189216.1 6010 6010 1 ENSG00000276162.1 MIR5739 chr22 28459869 28459948 + miRNA KNOWN NA 80 80 1 ENSG00000266503.2 RN7SL162P chr22 28642979 28643270 - misc_RNA KNOWN NA 292 292 1 ENSG00000183765.19 CHEK2 chr22 28687743 28742422 - protein_coding KNOWN OTTHUMG00000151023.22 54680 4142 242 ENSG00000100209.8 HSCB chr22 28742031 28757515 + protein_coding KNOWN OTTHUMG00000151092.1 15485 1462 39 ENSG00000159873.8 CCDC117 chr22 28772674 28789301 + protein_coding KNOWN OTTHUMG00000151091.1 16628 4326 25 ENSG00000280111.1 CTA-292E10.9 chr22 28784360 28809287 + antisense NOVEL OTTHUMG00000189214.1 24928 24928 1 ENSG00000100219.15 XBP1 chr22 28794555 28800597 - protein_coding KNOWN OTTHUMG00000151094.2 6043 3028 31 ENSG00000185013.15 NT5C1B chr2 18562872 18589572 - protein_coding KNOWN OTTHUMG00000151765.4 26701 3987 46 ENSG00000280977.1 Z93930.1 chr22 28798628 28798725 - miRNA NOVEL NA 98 98 1 ENSG00000226471.5 CTA-292E10.6 chr22 28800683 28848559 + antisense NOVEL OTTHUMG00000151093.2 47877 1470 11 ENSG00000272858.1 CTA-292E10.8 chr22 28814914 28815662 + sense_intronic NOVEL OTTHUMG00000186156.1 749 749 1 ENSG00000224256.1 CTA-292E10.7 chr22 28835893 28836137 - processed_pseudogene KNOWN OTTHUMG00000151116.1 245 245 1 ENSG00000183579.14 ZNRF3 chr22 28883592 29057487 + protein_coding KNOWN OTTHUMG00000151009.2 173896 6968 26 ENSG00000279978.1 chr22-38_28785274-29006793.1 chr22 28930201 29197572 + lincRNA NOVEL OTTHUMG00000189213.1 267372 267372 1 ENSG00000235786.1 ZNRF3-IT1 chr22 28992721 29018620 + sense_intronic NOVEL OTTHUMG00000151010.1 25900 674 2 ENSG00000177993.3 ZNRF3-AS1 chr22 29024999 29031476 - antisense NOVEL OTTHUMG00000153511.1 6478 2170 3 ENSG00000100249.4 C22orf31 chr22 29058672 29061844 - protein_coding KNOWN OTTHUMG00000151011.1 3173 995 3 ENSG00000183762.11 KREMEN1 chr22 29073078 29168333 + protein_coding KNOWN OTTHUMG00000030987.3 95256 7977 37 ENSG00000207170.1 RNU6-1215P chr2 18583367 18583468 - snRNA KNOWN NA 102 102 1 ENSG00000226772.1 CTA-747E2.10 chr22 29099041 29111683 - antisense NOVEL OTTHUMG00000151012.1 12643 539 2 ENSG00000281592.1 Z95116.1 chr22 29126261 29126404 - miRNA NOVEL NA 144 144 1 ENSG00000200871.1 RNU6-810P chr22 29134014 29134120 + snRNA KNOWN NA 107 107 1 ENSG00000251952.1 RNU6-1219P chr22 29191697 29191808 - snRNA KNOWN NA 112 112 1 ENSG00000186998.14 EMID1 chr22 29205851 29259597 + protein_coding KNOWN OTTHUMG00000151013.7 53747 4899 94 ENSG00000100263.12 RHBDD3 chr22 29259852 29268209 - protein_coding KNOWN OTTHUMG00000151032.2 8358 3014 31 ENSG00000237015.1 CTA-984G1.5 chr22 29260889 29262037 + antisense NOVEL OTTHUMG00000151156.1 1149 385 2 ENSG00000182944.16 EWSR1 chr22 29268009 29300525 + protein_coding KNOWN OTTHUMG00000151107.8 32517 10326 220 ENSG00000185340.14 GAS2L1 chr22 29306582 29312785 + protein_coding KNOWN OTTHUMG00000151108.5 6204 4481 44 ENSG00000100276.9 RASL10A chr22 29312933 29319679 - protein_coding KNOWN OTTHUMG00000151106.2 6747 2240 10 ENSG00000224626.1 AC106053.1 chr2 18784807 18787752 + lincRNA NOVEL OTTHUMG00000151764.1 2946 368 2 ENSG00000273216.1 AC002059.10 chr22 29316744 29317220 - sense_intronic NOVEL OTTHUMG00000186150.1 477 477 1 ENSG00000100280.15 AP1B1 chr22 29327680 29423179 - protein_coding KNOWN OTTHUMG00000151109.3 95500 6721 157 ENSG00000280968.1 MIR3653 chr22 29333158 29333267 - miRNA KNOWN NA 110 110 1 ENSG00000239127.1 SNORD125 chr22 29333163 29333258 - snoRNA KNOWN NA 96 96 1 ENSG00000242156.1 AC000041.8 chr22 29419155 29423193 - unprocessed_pseudogene KNOWN OTTHUMG00000151154.1 4039 175 2 ENSG00000278292.1 RFPL4AP6 chr22 29432944 29435005 + unprocessed_pseudogene KNOWN OTTHUMG00000188040.1 2062 846 3 ENSG00000225465.8 RFPL1S chr22 29436534 29478175 - antisense KNOWN OTTHUMG00000030476.7 41642 6271 9 ENSG00000274457.1 AC000041.10 chr22 29437583 29437733 + unprocessed_pseudogene KNOWN OTTHUMG00000188064.1 151 151 1 ENSG00000128250.5 RFPL1 chr22 29438583 29442455 + protein_coding KNOWN OTTHUMG00000150516.1 3873 1496 2 ENSG00000100285.9 NEFH chr22 29480230 29491390 + protein_coding KNOWN OTTHUMG00000151155.2 11161 3783 4 ENSG00000236204.4 LINC01376 chr2 18986451 19346748 - lincRNA NOVEL OTTHUMG00000151766.3 360298 2963 19 ENSG00000100296.12 THOC5 chr22 29505879 29555216 - protein_coding KNOWN OTTHUMG00000151291.10 49338 7878 189 ENSG00000234208.1 CTA-256D12.11 chr22 29513889 29535390 - sense_intronic NOVEL OTTHUMG00000151293.1 21502 289 2 ENSG00000184117.10 NIPSNAP1 chr22 29554808 29581337 - protein_coding KNOWN OTTHUMG00000151294.2 26530 3067 38 ENSG00000186575.16 NF2 chr22 29603556 29698598 + protein_coding KNOWN OTTHUMG00000030727.4 95043 7170 158 ENSG00000233010.1 RPEP4 chr22 29608900 29609501 + processed_pseudogene KNOWN OTTHUMG00000155625.1 602 602 1 ENSG00000232396.2 RP1-76B20.11 chr22 29705256 29719859 - antisense NOVEL OTTHUMG00000151279.2 14604 773 5 ENSG00000239446.1 RP1-76B20.12 chr22 29711820 29719714 - antisense NOVEL OTTHUMG00000151281.1 7895 244 2 ENSG00000100314.3 CABP7 chr22 29720084 29731839 + protein_coding KNOWN OTTHUMG00000151282.1 11756 3259 5 ENSG00000100319.12 ZMAT5 chr22 29730956 29767011 - protein_coding KNOWN OTTHUMG00000151292.1 36056 3200 8 ENSG00000200976.1 Y_RNA chr22 29758758 29758859 + misc_RNA NOVEL NA 102 102 1 ENSG00000237847.2 FAM231A chr1 16673003 16673512 + protein_coding KNOWN OTTHUMG00000189242.1 510 510 1 ENSG00000266738.1 MIR4757 chr2 19348429 19348505 + miRNA KNOWN NA 77 77 1 ENSG00000184076.12 UQCR10 chr22 29767369 29770413 + protein_coding KNOWN OTTHUMG00000151283.2 3045 975 7 ENSG00000100325.13 ASCC2 chr22 29788608 29838304 - protein_coding KNOWN OTTHUMG00000067658.6 49697 5416 167 ENSG00000100330.14 MTMR3 chr22 29883155 30030866 + protein_coding KNOWN OTTHUMG00000151278.2 147712 9903 122 ENSG00000278841.1 AC004819.1 chr22 29883860 29883945 + miRNA NOVEL NA 86 86 1 ENSG00000207455.1 RNU6-331P chr22 29899587 29899693 - snRNA KNOWN NA 107 107 1 ENSG00000221736.2 AC003681.1 chr22 29944206 29944299 + miRNA NOVEL NA 94 94 1 ENSG00000279159.1 RP3-394A18.1 chr22 29978950 30028236 - antisense NOVEL OTTHUMG00000189264.1 49287 49287 1 ENSG00000275818.1 MIR6818 chr22 30007049 30007113 + miRNA KNOWN NA 65 65 1 ENSG00000227117.5 HORMAD2-AS1 chr22 30008742 30080480 - antisense NOVEL OTTHUMG00000151289.2 71739 1439 11 ENSG00000227201.2 CNN2P1 chr22 30046276 30047193 - processed_pseudogene KNOWN OTTHUMG00000151269.1 918 918 1 ENSG00000143867.6 OSR1 chr2 19351485 19358653 - protein_coding KNOWN OTTHUMG00000088793.2 7169 5309 7 ENSG00000176635.16 HORMAD2 chr22 30080174 30177075 + protein_coding KNOWN OTTHUMG00000150881.3 96902 2575 35 ENSG00000226573.1 CTA-85E5.7 chr22 30105094 30105408 - processed_pseudogene KNOWN OTTHUMG00000150895.1 315 315 1 ENSG00000225971.1 CTA-85E5.6 chr22 30136673 30137681 - processed_pseudogene KNOWN OTTHUMG00000150894.1 1009 789 2 ENSG00000225676.1 RP3-438O4.4 chr22 30184644 30207109 - antisense NOVEL OTTHUMG00000150912.1 22466 298 3 ENSG00000232530.1 RP1-102K2.6 chr22 30239194 30240538 + antisense NOVEL OTTHUMG00000150909.1 1345 808 3 ENSG00000128342.4 LIF chr22 30240447 30246851 - protein_coding KNOWN OTTHUMG00000150910.2 6405 3969 5 ENSG00000268812.3 RP1-102K2.8 chr22 30246205 30246998 + antisense NOVEL OTTHUMG00000186198.1 794 794 1 ENSG00000099985.3 OSM chr22 30262829 30266840 - protein_coding KNOWN OTTHUMG00000150913.1 4012 2114 8 ENSG00000279699.1 RP1-102K2.9 chr22 30275215 30276951 - TEC KNOWN OTTHUMG00000186199.1 1737 1737 1 ENSG00000239282.6 GATSL3 chr22 30285117 30289627 - protein_coding KNOWN OTTHUMG00000150929.3 4511 2746 69 ENSG00000234597.1 AC010096.1 chr2 19458220 19468961 - lincRNA NOVEL OTTHUMG00000151772.1 10742 1709 2 ENSG00000248751.5 RP1-130H16.18 chr22 30285238 30299482 - protein_coding NOVEL OTTHUMG00000162144.1 14245 2057 65 ENSG00000099992.14 TBC1D10A chr22 30291990 30327046 - protein_coding KNOWN OTTHUMG00000150924.2 35057 7047 67 ENSG00000099995.17 SF3A1 chr22 30331988 30356947 - protein_coding KNOWN OTTHUMG00000151005.2 24960 6329 43 ENSG00000187860.9 CCDC157 chr22 30356635 30378658 + protein_coding KNOWN OTTHUMG00000151007.2 22024 6586 49 ENSG00000099999.13 RNF215 chr22 30368811 30421771 - protein_coding KNOWN OTTHUMG00000151016.5 52961 10624 43 ENSG00000100003.16 SEC14L2 chr22 30396857 30425317 + protein_coding KNOWN OTTHUMG00000151024.26 28461 5985 120 ENSG00000249590.6 RP4-539M6.19 chr22 30409255 30428990 + protein_coding NOVEL OTTHUMG00000160853.2 19736 1480 18 ENSG00000275258.1 AC004832.1 chr22 30411646 30411755 + miRNA NOVEL NA 110 110 1 ENSG00000273350.1 RP4-539M6.20 chr22 30420512 30420912 + sense_intronic NOVEL OTTHUMG00000186200.1 401 401 1 ENSG00000222915.1 RNU6-564P chr22 30421045 30421148 + snRNA KNOWN NA 104 104 1 ENSG00000237992.1 AC010096.2 chr2 19475450 19488850 + lincRNA NOVEL OTTHUMG00000151774.1 13401 754 3 ENSG00000272689.1 RP4-539M6.21 chr22 30421206 30421536 - sense_intronic NOVEL OTTHUMG00000186201.1 331 331 1 ENSG00000242114.4 MTFP1 chr22 30425530 30429053 + protein_coding KNOWN OTTHUMG00000151057.5 3524 1696 20 ENSG00000273428.3 RP4-539M6.22 chr22 30435544 30436247 + lincRNA NOVEL OTTHUMG00000186202.1 704 704 3 ENSG00000230137.1 RP4-539M6.18 chr22 30439837 30440318 + processed_pseudogene KNOWN OTTHUMG00000151268.1 482 482 1 ENSG00000100012.10 SEC14L3 chr22 30447959 30472049 - protein_coding KNOWN OTTHUMG00000151259.4 24091 3663 85 ENSG00000181123.7 RP4-539M6.14 chr22 30475364 30492804 + antisense NOVEL OTTHUMG00000151260.5 17441 2422 18 ENSG00000214161.3 SDC4P chr22 30481311 30481911 - processed_pseudogene KNOWN OTTHUMG00000151266.1 601 601 1 ENSG00000133488.13 SEC14L4 chr22 30488913 30505711 - protein_coding KNOWN OTTHUMG00000151258.1 16799 2624 49 ENSG00000214491.7 SEC14L6 chr22 30522799 30546682 - protein_coding KNOWN OTTHUMG00000151267.2 23884 3392 16 ENSG00000225774.2 SIRPAP1 chr22 30542536 30544305 + processed_pseudogene KNOWN OTTHUMG00000151257.1 1770 1770 1 ENSG00000235911.1 AC019055.1 chr2 19711715 19717576 + lincRNA NOVEL OTTHUMG00000151775.1 5862 443 2 ENSG00000128242.11 GAL3ST1 chr22 30554635 30574587 - protein_coding KNOWN OTTHUMG00000151200.2 19953 3017 81 ENSG00000100029.16 PES1 chr22 30576625 30607083 - protein_coding KNOWN OTTHUMG00000151077.5 30459 4557 112 ENSG00000223831.1 RP1-56J10.8 chr22 30598309 30606687 + sense_intronic NOVEL OTTHUMG00000151090.1 8379 249 3 ENSG00000185339.7 TCN2 chr22 30606838 30627278 + protein_coding KNOWN OTTHUMG00000151095.3 20441 3122 44 ENSG00000100036.12 SLC35E4 chr22 30635652 30669016 + protein_coding KNOWN OTTHUMG00000151110.1 33365 5531 8 ENSG00000167065.12 DUSP18 chr22 30652051 30667890 - protein_coding KNOWN OTTHUMG00000151115.2 15840 4450 27 ENSG00000250318.1 CTA-963H5.5 chr22 30653877 30654814 - unprocessed_pseudogene KNOWN OTTHUMG00000151111.1 938 612 2 ENSG00000184792.14 OSBP2 chr22 30693782 30907824 + protein_coding KNOWN OTTHUMG00000151153.5 214043 6700 169 ENSG00000264661.2 AL022336.1 chr22 30731540 30731649 + miRNA NOVEL NA 110 110 1 ENSG00000237977.1 EIF4HP2 chr22 30902219 30902781 + processed_pseudogene KNOWN OTTHUMG00000151158.1 563 563 1 ENSG00000213403.2 CISD1P1 chr2 19826249 19826575 + processed_pseudogene KNOWN OTTHUMG00000151771.1 327 327 1 ENSG00000235989.3 MORC2-AS1 chr22 30922308 30932449 + antisense KNOWN OTTHUMG00000150197.3 10142 2695 10 ENSG00000133422.11 MORC2 chr22 30925130 30968298 - protein_coding KNOWN OTTHUMG00000151193.4 43169 6258 73 ENSG00000253352.7 TUG1 chr22 30970677 30979395 + antisense KNOWN OTTHUMG00000030444.4 8719 6793 23 ENSG00000276664.1 TUG1_1 chr22 30971005 30971149 + misc_RNA NOVEL NA 145 145 1 ENSG00000276057.1 TUG1_2 chr22 30971296 30971382 + misc_RNA NOVEL NA 87 87 1 ENSG00000276965.1 TUG1_3 chr22 30972857 30973093 + misc_RNA NOVEL NA 237 237 1 ENSG00000275307.1 TUG1_4 chr22 30973417 30973597 + misc_RNA NOVEL NA 181 181 1 ENSG00000269987.1 RP3-430N8.11 chr22 30976515 30978848 - lincRNA NOVEL OTTHUMG00000183897.1 2334 546 2 ENSG00000269972.1 RP3-430N8.10 chr22 30977516 30977858 - lincRNA NOVEL OTTHUMG00000183898.1 343 264 2 ENSG00000278920.1 RP3-412A9.17 chr22 31051630 31068327 + sense_overlapping NOVEL OTTHUMG00000189271.1 16698 16698 1 ENSG00000228784.6 LINC00954 chr2 19868860 19885047 + lincRNA NOVEL OTTHUMG00000151773.2 16188 4683 26 ENSG00000240186.3 RN7SL633P chr22 31059989 31060285 + misc_RNA KNOWN NA 297 297 1 ENSG00000183963.17 SMTN chr22 31064105 31104757 + protein_coding KNOWN OTTHUMG00000151203.6 40653 10242 231 ENSG00000273387.1 RP3-412A9.16 chr22 31082156 31083565 - antisense NOVEL OTTHUMG00000186126.1 1410 1410 1 ENSG00000198832.9 SELM chr22 31104772 31120069 - protein_coding KNOWN OTTHUMG00000151207.1 15298 3187 45 ENSG00000235573.2 RP3-412A9.12 chr22 31113017 31113396 + processed_pseudogene KNOWN OTTHUMG00000151205.2 380 380 1 ENSG00000185133.12 INPP5J chr22 31122731 31134696 + protein_coding KNOWN OTTHUMG00000151206.9 11966 4822 120 ENSG00000100078.3 PLA2G3 chr22 31134809 31140607 - protein_coding KNOWN OTTHUMG00000151255.1 5799 2697 7 ENSG00000214125.2 RP3-412A9.15 chr22 31155966 31156647 - processed_pseudogene KNOWN OTTHUMG00000151250.1 682 682 1 ENSG00000264141.1 MIR3928 chr22 31160062 31160119 - miRNA KNOWN NA 58 58 1 ENSG00000138942.14 RNF185 chr22 31160183 31207019 + protein_coding KNOWN OTTHUMG00000151253.3 46837 3447 43 ENSG00000183891.5 TTC32 chr2 19896643 19901986 - protein_coding KNOWN OTTHUMG00000151776.2 5344 1986 9 ENSG00000254835.1 RNF185-AS1 chr22 31205264 31205616 - antisense NOVEL OTTHUMG00000166845.1 353 353 1 ENSG00000182541.16 LIMK2 chr22 31212239 31280080 + protein_coding KNOWN OTTHUMG00000151251.1 67842 6170 79 ENSG00000199695.1 RNU6-1128P chr22 31222745 31222853 - snRNA KNOWN NA 109 109 1 ENSG00000202019.1 Y_RNA chr22 31230071 31230172 - misc_RNA NOVEL NA 102 102 1 ENSG00000100100.11 PIK3IP1 chr22 31281593 31292534 - protein_coding KNOWN OTTHUMG00000151256.1 10942 3805 27 ENSG00000228839.4 PIK3IP1-AS1 chr22 31292499 31338021 + antisense NOVEL OTTHUMG00000151249.1 45523 622 4 ENSG00000212542.1 RNA5SP496 chr22 31305404 31305512 + rRNA KNOWN NA 109 109 1 ENSG00000100105.16 PATZ1 chr22 31325804 31346232 - protein_coding KNOWN OTTHUMG00000151254.1 20429 5693 21 ENSG00000213888.3 LINC01521 chr22 31346777 31348719 + lincRNA NOVEL OTTHUMG00000187474.1 1943 1943 2 ENSG00000206615.1 RNU6-338P chr22 31388733 31388837 - snRNA KNOWN NA 105 105 1 ENSG00000271991.1 RP11-79O8.1 chr2 19902025 19902569 + lincRNA NOVEL OTTHUMG00000185562.1 545 545 1 ENSG00000185721.10 DRG1 chr22 31399523 31528740 + protein_coding KNOWN OTTHUMG00000030792.11 129218 2113 32 ENSG00000184708.16 EIF4ENIF1 chr22 31436977 31496108 - protein_coding KNOWN OTTHUMG00000030793.11 59132 6084 117 ENSG00000240591.1 RP11-247I13.11 chr22 31454251 31464204 + antisense NOVEL OTTHUMG00000159059.1 9954 788 4 ENSG00000199248.1 RNU6-28P chr22 31479383 31479489 - snRNA KNOWN NA 107 107 1 ENSG00000198089.13 SFI1 chr22 31488688 31618586 + protein_coding KNOWN OTTHUMG00000030249.13 129899 12174 325 ENSG00000233733.1 H2AFZP6 chr22 31521199 31521592 - processed_pseudogene KNOWN OTTHUMG00000030795.2 394 394 1 ENSG00000229169.1 RP11-247I13.6 chr22 31538352 31538589 - processed_pseudogene KNOWN OTTHUMG00000030797.2 238 238 1 ENSG00000214093.3 RP11-247I13.3 chr22 31559483 31559939 + processed_pseudogene KNOWN OTTHUMG00000030794.2 457 457 1 ENSG00000241878.8 PISD chr22 31618491 31662432 - protein_coding KNOWN OTTHUMG00000030252.27 43942 5002 101 ENSG00000275382.1 MIR7109 chr22 31621467 31621531 - miRNA KNOWN NA 65 65 1 ENSG00000118965.13 WDR35 chr2 19910260 19990131 - protein_coding KNOWN OTTHUMG00000090737.3 79872 7836 113 ENSG00000183530.12 PRR14L chr22 31676256 31750140 - protein_coding KNOWN OTTHUMG00000030139.14 73885 11809 33 ENSG00000100150.15 DEPDC5 chr22 31753951 31907034 + protein_coding KNOWN OTTHUMG00000030926.15 153084 8196 364 ENSG00000242251.3 RN7SL20P chr22 31757202 31757498 + misc_RNA KNOWN NA 297 297 1 ENSG00000236132.1 CTA-440B3.1 chr22 31816379 31817491 - processed_pseudogene KNOWN OTTHUMG00000030879.2 1113 477 3 ENSG00000252909.1 RNU6-201P chr22 31837238 31837298 + snRNA KNOWN NA 61 61 1 ENSG00000227813.1 RP1-180M12.1 chr22 31890344 31891434 - processed_pseudogene KNOWN OTTHUMG00000030407.2 1091 490 2 ENSG00000128254.12 C22orf24 chr22 31933521 31945518 - processed_transcript KNOWN OTTHUMG00000030834.3 11998 1754 8 ENSG00000128245.13 YWHAH chr22 31944461 31957603 + protein_coding KNOWN OTTHUMG00000030833.8 13143 2453 15 ENSG00000227519.1 CTA-342B11.1 chr22 31963357 31970400 + lincRNA NOVEL OTTHUMG00000058207.1 7044 473 2 ENSG00000230866.1 CTA-342B11.2 chr22 31970823 31973475 + lincRNA NOVEL OTTHUMG00000150005.1 2653 336 5 ENSG00000280114.1 RP5-875O13.7 chr1 16681097 16688749 - unprocessed_pseudogene KNOWN OTTHUMG00000189243.1 7653 1351 5 ENSG00000227210.1 AC079145.4 chr2 19990217 20004210 + antisense NOVEL OTTHUMG00000151790.1 13994 541 3 ENSG00000240647.3 RN7SL305P chr22 31981147 31981427 - misc_RNA KNOWN NA 281 281 1 ENSG00000280370.1 CTA-342B11.3 chr22 31991593 32016256 + lincRNA NOVEL OTTHUMG00000189217.1 24664 24664 1 ENSG00000232346.1 SC22CB-1E7.1 chr22 32039490 32039896 + processed_pseudogene KNOWN OTTHUMG00000030769.2 407 407 1 ENSG00000100170.8 SLC5A1 chr22 32043032 32113029 + protein_coding KNOWN OTTHUMG00000030768.5 69998 5310 38 ENSG00000234479.2 AP1B1P1 chr22 32121977 32133469 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000030158.4 11493 827 5 ENSG00000237439.1 RP1-127L4.10 chr22 32129689 32130612 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000128471.1 924 630 2 ENSG00000232707.1 AP1B1P2 chr22 32134028 32134133 + unprocessed_pseudogene KNOWN OTTHUMG00000030159.2 106 106 1 ENSG00000239674.2 RP1-127L4.7 chr22 32141267 32143272 + lincRNA NOVEL OTTHUMG00000073689.2 2006 274 2 ENSG00000205856.3 C22orf42 chr22 32149006 32159322 - protein_coding KNOWN OTTHUMG00000030380.3 10317 2055 19 ENSG00000230120.1 RP1-90G24.8 chr22 32159454 32160392 - lincRNA NOVEL OTTHUMG00000150003.1 939 562 2 ENSG00000132031.11 MATN3 chr2 19992111 20012694 - protein_coding KNOWN OTTHUMG00000151788.1 20584 3118 17 ENSG00000275656.1 RFPL3-AS1_1 chr22 32188400 32188487 - misc_RNA NOVEL NA 88 88 1 ENSG00000128253.12 RFPL2 chr22 32190435 32203477 - protein_coding KNOWN OTTHUMG00000030374.4 13043 2718 20 ENSG00000279219.1 AL008723.1 chr22 32191094 32191452 + protein_coding KNOWN NA 359 359 1 ENSG00000254127.1 IGLCOR22-1 chr22 32199919 32200234 + IG_C_pseudogene KNOWN OTTHUMG00000030375.2 316 316 1 ENSG00000242082.1 RP1-90G24.10 chr22 32205115 32269666 + antisense NOVEL OTTHUMG00000150008.1 64552 876 4 ENSG00000100191.5 SLC5A4 chr22 32218476 32255341 - protein_coding KNOWN OTTHUMG00000150007.2 36866 2030 15 ENSG00000214076.3 CPSF1P1 chr22 32269381 32273110 + processed_pseudogene KNOWN OTTHUMG00000030378.3 3730 3730 1 ENSG00000224050.1 RP1-90G24.6 chr22 32273420 32277186 + lincRNA NOVEL OTTHUMG00000073688.1 3767 590 2 ENSG00000273325.1 RP1-90G24.11 chr22 32284683 32285131 + lincRNA NOVEL OTTHUMG00000186203.1 449 449 1 ENSG00000234626.1 RP1-149A16.12 chr22 32327171 32343105 - antisense NOVEL OTTHUMG00000058271.1 15935 361 2 ENSG00000068697.6 LAPTM4A chr2 20032650 20052028 - protein_coding KNOWN OTTHUMG00000090750.2 19379 1946 10 ENSG00000280361.1 RP1-149A16.19 chr22 32348584 32349555 + lincRNA NOVEL OTTHUMG00000189218.1 972 972 1 ENSG00000128276.9 RFPL3 chr22 32354885 32361161 + protein_coding KNOWN OTTHUMG00000030290.4 6277 1501 5 ENSG00000271093.1 IGLCOR22-2 chr22 32356676 32356988 - IG_C_pseudogene KNOWN OTTHUMG00000184769.1 313 313 1 ENSG00000205853.9 RFPL3S chr22 32359906 32382052 - protein_coding KNOWN OTTHUMG00000030295.5 22147 1790 23 ENSG00000274617.1 RFPL3-AS1_1 chr22 32362972 32363059 + misc_RNA NOVEL NA 88 88 1 ENSG00000274170.1 RFPL3-AS1_2 chr22 32368497 32368567 + misc_RNA NOVEL NA 71 71 1 ENSG00000230736.2 RP1-149A16.3 chr22 32376664 32384343 + lincRNA NOVEL OTTHUMG00000058267.1 7680 1558 3 ENSG00000243519.1 IGLVIVOR22-2 chr22 32376682 32377135 + IG_V_pseudogene KNOWN OTTHUMG00000099456.1 454 330 2 ENSG00000241954.1 RP1-149A16.17 chr22 32383786 32385631 + lincRNA NOVEL OTTHUMG00000150006.1 1846 444 2 ENSG00000232218.1 RP1-149A16.16 chr22 32386668 32386868 + unprocessed_pseudogene KNOWN OTTHUMG00000099457.1 201 201 1 ENSG00000223734.2 RP11-644K8.1 chr2 20052134 20054496 + lincRNA NOVEL OTTHUMG00000168757.1 2363 573 2 ENSG00000100220.10 RTCB chr22 32387582 32412255 - protein_coding KNOWN OTTHUMG00000030300.7 24674 2948 32 ENSG00000184459.7 BPIFC chr22 32413847 32464484 - protein_coding KNOWN OTTHUMG00000058273.2 50638 2228 49 ENSG00000100225.16 FBXO7 chr22 32474676 32498829 + protein_coding KNOWN OTTHUMG00000030674.10 24154 8521 58 ENSG00000185666.13 SYN3 chr22 32512552 33058372 - protein_coding KNOWN OTTHUMG00000031004.23 545821 5444 57 ENSG00000236054.1 LL22NC03-104C7.1 chr22 32583300 32584204 + antisense NOVEL OTTHUMG00000058269.1 905 457 2 ENSG00000251890.1 RNA5SP497 chr22 32635102 32635198 - rRNA KNOWN NA 97 97 1 ENSG00000229673.1 LL22NC01-116C6.1 chr22 32783177 32784982 + antisense NOVEL OTTHUMG00000058268.1 1806 147 2 ENSG00000100234.11 TIMP3 chr22 32801701 32863043 + protein_coding KNOWN OTTHUMG00000030784.3 61343 4603 5 ENSG00000279338.1 RP1-309I22.2 chr22 32836706 32865634 + sense_overlapping NOVEL OTTHUMG00000189209.1 28929 28929 1 ENSG00000228194.1 CTA-415G2.2 chr22 33014980 33015461 + processed_pseudogene KNOWN OTTHUMG00000030096.2 482 265 2 ENSG00000234378.1 AC098828.2 chr2 20063856 20106829 - lincRNA NOVEL OTTHUMG00000151787.1 42974 746 2 ENSG00000228622.1 RP1-302D9.1 chr22 33105383 33106059 - lincRNA NOVEL OTTHUMG00000030382.2 677 437 2 ENSG00000231253.1 RP1-302D9.2 chr22 33108529 33116294 + lincRNA NOVEL OTTHUMG00000150002.1 7766 550 4 ENSG00000233632.1 RP1-302D9.5 chr22 33137140 33137338 + processed_pseudogene KNOWN OTTHUMG00000155747.1 199 199 1 ENSG00000133424.19 LARGE chr22 33162226 33922841 - protein_coding KNOWN OTTHUMG00000150914.19 760616 10687 96 ENSG00000232073.1 RP1-302D9.3 chr22 33164063 33166439 + antisense NOVEL OTTHUMG00000150009.1 2377 567 2 ENSG00000230741.1 SC22CB-1D7.1 chr22 33320865 33322813 + antisense NOVEL OTTHUMG00000150925.1 1949 484 2 ENSG00000266012.1 MIR4764 chr22 33436582 33436669 - miRNA KNOWN NA 88 88 1 ENSG00000281295.1 SNORA50 chr22 33704786 33704922 - snoRNA NOVEL NA 137 137 1 ENSG00000253007.2 SNORA76 chr22 33704786 33704920 - snoRNA NOVEL NA 135 135 1 ENSG00000232081.1 LARGE-IT1 chr22 33723832 33724912 - sense_intronic NOVEL OTTHUMG00000150915.1 1081 558 2 ENSG00000213729.3 AC098828.3 chr2 20155618 20156057 - processed_pseudogene KNOWN OTTHUMG00000151786.2 440 440 1 ENSG00000224973.4 LARGE-AS1 chr22 33725014 33750843 + processed_transcript NOVEL OTTHUMG00000150916.3 25830 2929 41 ENSG00000273082.1 LL22NC03-32F9.1 chr22 33922422 33922766 + antisense NOVEL OTTHUMG00000186104.1 345 345 1 ENSG00000236052.1 LL22NC03-86D4.1 chr22 34017473 34188425 + lincRNA NOVEL OTTHUMG00000150928.3 170953 757 8 ENSG00000224404.1 LL22NC03-13G6.2 chr22 34208141 34209262 - lincRNA NOVEL OTTHUMG00000150930.1 1122 519 2 ENSG00000279003.1 LL22NC03-22D1.1 chr22 34477746 34506771 + lincRNA NOVEL OTTHUMG00000189210.1 29026 29026 1 ENSG00000235485.1 RP1-101G11.2 chr22 34589085 34591278 - processed_pseudogene KNOWN OTTHUMG00000150932.1 2194 2194 1 ENSG00000280356.1 RP1-101G11.3 chr22 34641179 34651862 + lincRNA NOVEL OTTHUMG00000189274.1 10684 10684 1 ENSG00000234891.1 RP1-288L1.5 chr22 34703126 34704885 - lincRNA NOVEL OTTHUMG00000150931.1 1760 768 3 ENSG00000237316.1 RP1-288L1.4 chr22 34711908 34724919 - lincRNA NOVEL OTTHUMG00000150933.1 13012 549 4 ENSG00000227895.5 ISX-AS1 chr22 34997719 35002862 - lincRNA NOVEL OTTHUMG00000150934.4 5144 202 2 ENSG00000266059.2 RN7SL140P chr2 20175346 20175639 + misc_RNA KNOWN NA 294 294 1 ENSG00000279582.1 SC22CB-109E1.1 chr22 35051326 35061427 + lincRNA NOVEL OTTHUMG00000189211.1 10102 10102 1 ENSG00000175329.11 ISX chr22 35066136 35087387 + protein_coding KNOWN OTTHUMG00000150962.2 21252 3384 9 ENSG00000233080.2 LINC01399 chr22 35119824 35231056 - lincRNA NOVEL OTTHUMG00000150957.1 111233 648 6 ENSG00000273068.1 CTA-714B7.7 chr22 35122661 35127419 + lincRNA NOVEL OTTHUMG00000185932.1 4759 364 2 ENSG00000279184.1 RP3-323A16.1 chr22 35160947 35215025 + antisense NOVEL OTTHUMG00000189208.1 54079 54079 1 ENSG00000238153.1 CTA-714B7.4 chr22 35164304 35165347 + processed_pseudogene KNOWN OTTHUMG00000150959.1 1044 380 2 ENSG00000243453.1 COX7BP1 chr22 35194699 35194942 - processed_pseudogene KNOWN OTTHUMG00000155624.1 244 244 1 ENSG00000238584.1 RNU7-167P chr22 35249772 35249833 + snRNA KNOWN NA 62 62 1 ENSG00000100281.12 HMGXB4 chr22 35257452 35295807 + protein_coding KNOWN OTTHUMG00000150439.2 38356 6006 44 ENSG00000273176.1 RP3-510H16.3 chr22 35298838 35299541 - antisense NOVEL OTTHUMG00000186162.1 704 385 2 ENSG00000200763.1 RNU6-961P chr2 20175805 20175909 + snRNA KNOWN NA 105 105 1 ENSG00000100284.19 TOM1 chr22 35299275 35347994 + protein_coding KNOWN OTTHUMG00000150958.4 48720 5871 161 ENSG00000266320.1 MIR3909 chr22 35335640 35335758 + miRNA KNOWN NA 119 119 1 ENSG00000274280.1 MIR6069 chr22 35336721 35336799 - miRNA KNOWN NA 79 79 1 ENSG00000100292.15 HMOX1 chr22 35380361 35394214 + protein_coding KNOWN OTTHUMG00000150960.2 13854 2405 14 ENSG00000100297.14 MCM5 chr22 35400063 35425430 + protein_coding KNOWN OTTHUMG00000150961.17 25368 7338 74 ENSG00000233388.2 RP4-569D19.5 chr22 35501861 35503586 - processed_pseudogene KNOWN OTTHUMG00000150608.2 1726 1726 1 ENSG00000273044.1 RP4-569D19.8 chr22 35526932 35527415 + lincRNA NOVEL OTTHUMG00000186105.1 484 484 1 ENSG00000100302.6 RASD2 chr22 35540868 35554001 + protein_coding KNOWN OTTHUMG00000150607.1 13134 3412 3 ENSG00000198125.11 MB chr22 35606764 35637951 - protein_coding KNOWN OTTHUMG00000150606.10 31188 2168 36 ENSG00000268818.2 CITF22-62D4.1 chr22 35626988 35635134 - sense_intronic NOVEL OTTHUMG00000187476.1 8147 852 2 ENSG00000115884.9 SDC1 chr2 20200797 20225433 - protein_coding KNOWN OTTHUMG00000090751.3 24637 3595 25 ENSG00000221963.5 APOL6 chr22 35648395 35668409 + protein_coding KNOWN OTTHUMG00000150615.2 20015 10121 3 ENSG00000228587.1 RP1-41P2.7 chr22 35685940 35689373 + lincRNA NOVEL OTTHUMG00000150586.1 3434 601 2 ENSG00000226336.2 MRPS16P3 chr22 35703803 35704176 + processed_pseudogene KNOWN OTTHUMG00000150587.2 374 374 1 ENSG00000128313.2 APOL5 chr22 35717872 35729483 + protein_coding KNOWN OTTHUMG00000150588.1 11612 1438 5 ENSG00000100320.21 RBFOX2 chr22 35738736 36028425 - protein_coding KNOWN OTTHUMG00000150585.10 289690 10014 139 ENSG00000237406.1 NDUFA9P1 chr22 35897270 35898404 - processed_pseudogene KNOWN OTTHUMG00000150636.1 1135 1135 1 ENSG00000279652.1 RP1-78B3.1 chr22 35992321 36000469 + lincRNA NOVEL OTTHUMG00000189270.1 8149 8149 1 ENSG00000279927.1 CTA-212A2.4 chr22 36066533 36070110 + lincRNA NOVEL OTTHUMG00000189181.1 3578 3578 1 ENSG00000279217.1 CTA-212A2.3 chr22 36071000 36085573 + lincRNA NOVEL OTTHUMG00000189182.1 14574 14574 1 ENSG00000279714.1 CTA-212A2.2 chr22 36091148 36093352 + lincRNA NOVEL OTTHUMG00000189183.1 2205 2205 1 ENSG00000235411.1 AC007041.2 chr2 20239892 20241046 - processed_pseudogene KNOWN OTTHUMG00000151785.1 1155 1155 1 ENSG00000279805.1 CTA-212A2.1 chr22 36137430 36139350 - TEC KNOWN OTTHUMG00000172731.1 1921 1921 1 ENSG00000128284.18 APOL3 chr22 36140330 36166177 - protein_coding KNOWN OTTHUMG00000150632.19 25848 5901 77 ENSG00000233764.1 Z95114.4 chr22 36172422 36172779 + processed_pseudogene KNOWN OTTHUMG00000150633.1 358 358 1 ENSG00000231576.1 Z95114.3 chr22 36172934 36173948 + processed_pseudogene KNOWN OTTHUMG00000150631.1 1015 673 2 ENSG00000237948.1 Z95114.5 chr22 36174261 36174822 + processed_pseudogene KNOWN OTTHUMG00000150639.1 562 562 1 ENSG00000225557.1 Z95114.6 chr22 36175167 36175854 + processed_pseudogene KNOWN OTTHUMG00000150635.3 688 688 1 ENSG00000237129.1 Z95114.7 chr22 36175857 36176526 + processed_pseudogene KNOWN OTTHUMG00000150638.1 670 670 1 ENSG00000229088.1 MTND1P10 chr22 36178554 36179385 + processed_pseudogene KNOWN OTTHUMG00000150637.1 832 832 1 ENSG00000100336.16 APOL4 chr22 36189124 36204840 - protein_coding KNOWN OTTHUMG00000150630.22 15717 4377 57 ENSG00000128335.12 APOL2 chr22 36226203 36239954 - protein_coding KNOWN OTTHUMG00000150634.4 13752 3484 37 ENSG00000264742.1 AL021920.1 chr1 16681255 16681328 + miRNA NOVEL NA 74 74 1 ENSG00000238735.1 RNU7-113P chr2 20246326 20246387 - snRNA KNOWN NA 62 62 1 ENSG00000100342.19 APOL1 chr22 36253010 36267530 + protein_coding KNOWN OTTHUMG00000030427.8 14521 3519 71 ENSG00000100345.19 MYH9 chr22 36281281 36388018 - protein_coding KNOWN OTTHUMG00000030429.6 106738 8959 78 ENSG00000278420.1 MIR6819 chr22 36286847 36286907 - miRNA KNOWN NA 61 61 1 ENSG00000223695.1 RP4-633O19__A.1 chr22 36388626 36396517 + lincRNA NOVEL OTTHUMG00000150616.1 7892 510 2 ENSG00000237668.1 RPS15AP38 chr22 36421273 36421644 - processed_pseudogene KNOWN OTTHUMG00000150595.1 372 372 1 ENSG00000252575.1 BX470187.1 chr22 36438824 36438926 - miRNA NOVEL NA 103 103 1 ENSG00000252225.1 Y_RNA chr22 36440880 36440970 - misc_RNA NOVEL NA 91 91 1 ENSG00000228719.1 RP5-1119A7.14 chr22 36445395 36454944 - lincRNA NOVEL OTTHUMG00000150597.2 9550 372 2 ENSG00000100348.8 TXN2 chr22 36467036 36482030 - protein_coding KNOWN OTTHUMG00000150596.3 14995 2050 21 ENSG00000100350.13 FOXRED2 chr22 36487190 36507101 - protein_coding KNOWN OTTHUMG00000044614.4 19912 5577 32 ENSG00000055917.14 PUM2 chr2 20248691 20352234 - protein_coding KNOWN OTTHUMG00000122098.3 103544 6978 131 ENSG00000100353.16 EIF3D chr22 36510850 36529436 - protein_coding KNOWN OTTHUMG00000150599.3 18587 4070 79 ENSG00000188078.5 RP5-1119A7.11 chr22 36536656 36537604 - unprocessed_pseudogene KNOWN OTTHUMG00000150600.1 949 444 2 ENSG00000229971.1 RP5-1119A7.10 chr22 36552165 36552700 + antisense NOVEL OTTHUMG00000150598.1 536 405 2 ENSG00000261675.1 RP5-1119A7.17 chr22 36560870 36562915 - sense_overlapping NOVEL OTTHUMG00000176420.1 2046 2046 1 ENSG00000166862.6 CACNG2 chr22 36563921 36703558 - protein_coding KNOWN OTTHUMG00000030612.3 139638 3224 6 ENSG00000234688.1 RP1-293L6.1 chr22 36703918 36721472 + antisense NOVEL OTTHUMG00000150584.1 17555 632 2 ENSG00000100360.13 IFT27 chr22 36758202 36776256 - protein_coding KNOWN OTTHUMG00000150544.17 18055 8009 57 ENSG00000100362.11 PVALB chr22 36800684 36819479 - protein_coding KNOWN OTTHUMG00000150547.14 18796 1050 25 ENSG00000234979.1 CITF22-24E5.1 chr22 36816326 36819736 + antisense NOVEL OTTHUMG00000150549.1 3411 549 3 ENSG00000183822.3 CTA-833B7.2 chr22 36847372 36870441 - antisense NOVEL OTTHUMG00000150550.2 23070 1218 4 ENSG00000232800.1 SLC7A15P chr2 20386386 20396588 + unitary_pseudogene KNOWN OTTHUMG00000154621.1 10203 1363 6 ENSG00000100365.13 NCF4 chr22 36860988 36878015 + protein_coding KNOWN OTTHUMG00000150548.2 17028 1759 30 ENSG00000100368.12 CSF2RB chr22 36913628 36940449 + protein_coding KNOWN OTTHUMG00000150546.1 26822 5000 49 ENSG00000232254.1 CSF2RBP1 chr22 36950529 36953723 - unprocessed_pseudogene KNOWN OTTHUMG00000150535.1 3195 391 3 ENSG00000215403.1 LL22NC01-81G9.3 chr22 36965248 36968172 + antisense NOVEL OTTHUMG00000150539.1 2925 992 4 ENSG00000185264.10 TEX33 chr22 36991120 37007841 - protein_coding KNOWN OTTHUMG00000150531.3 16722 1154 23 ENSG00000128311.12 TST chr22 37010859 37020183 - protein_coding KNOWN OTTHUMG00000150533.2 9325 1937 10 ENSG00000252412.1 Y_RNA chr22 37013225 37013319 + misc_RNA NOVEL NA 95 95 1 ENSG00000128309.15 MPST chr22 37019635 37029822 + protein_coding KNOWN OTTHUMG00000150543.2 10188 6760 26 ENSG00000100379.16 KCTD17 chr22 37051736 37063390 + protein_coding KNOWN OTTHUMG00000150532.2 11655 2786 51 ENSG00000201078.1 RN7SKP214 chr22 37055033 37055347 - misc_RNA KNOWN NA 315 315 1 ENSG00000212171.1 RNA5SP86 chr2 20401627 20401724 - rRNA KNOWN NA 98 98 1 ENSG00000187045.15 TMPRSS6 chr22 37065436 37109563 - protein_coding KNOWN OTTHUMG00000150541.2 44128 4082 91 ENSG00000231467.2 RP5-1170K4.7 chr22 37080068 37082847 + antisense NOVEL OTTHUMG00000150536.2 2780 464 3 ENSG00000100385.12 IL2RB chr22 37125838 37175054 - protein_coding KNOWN OTTHUMG00000150534.2 49217 4700 40 ENSG00000252142.1 AL022314.1 chr22 37138024 37138083 + miRNA NOVEL NA 60 60 1 ENSG00000235237.1 RP1-151B14.6 chr22 37166757 37182850 + antisense NOVEL OTTHUMG00000150530.1 16094 630 2 ENSG00000133466.12 C1QTNF6 chr22 37180167 37199385 - protein_coding KNOWN OTTHUMG00000150538.1 19219 7143 33 ENSG00000278195.1 SSTR3 chr22 37204238 37212322 - protein_coding KNOWN OTTHUMG00000150537.3 8085 4521 4 ENSG00000226233.1 RP1-151B14.9 chr22 37215738 37215891 - processed_pseudogene KNOWN OTTHUMG00000150542.1 154 154 1 ENSG00000128340.13 RAC2 chr22 37225261 37244448 - protein_coding KNOWN OTTHUMG00000150540.1 19188 2532 36 ENSG00000100055.19 CYTH4 chr22 37282027 37315345 + protein_coding KNOWN OTTHUMG00000150562.19 33319 6161 73 ENSG00000281337.1 AC007041.1 chr2 20401650 20401706 - miRNA NOVEL NA 57 57 1 ENSG00000243902.5 RP1-63G5.5 chr22 37339583 37427445 - sense_overlapping NOVEL OTTHUMG00000150561.1 87863 2118 6 ENSG00000237862.1 RP1-63G5.7 chr22 37352190 37354839 - sense_intronic NOVEL OTTHUMG00000150559.1 2650 1965 2 ENSG00000166897.13 ELFN2 chr22 37367960 37427470 - protein_coding KNOWN OTTHUMG00000150558.3 59511 8782 21 ENSG00000272694.1 RP1-63G5.8 chr22 37371684 37372858 + antisense NOVEL OTTHUMG00000185931.1 1175 910 2 ENSG00000100060.16 MFNG chr22 37469063 37486401 - protein_coding KNOWN OTTHUMG00000150560.2 17339 3042 46 ENSG00000100065.13 CARD10 chr22 37490362 37519542 - protein_coding KNOWN OTTHUMG00000150592.2 29181 5652 101 ENSG00000225867.1 RP5-1177I5.3 chr22 37550026 37551735 + antisense NOVEL OTTHUMG00000150593.1 1710 498 2 ENSG00000128283.6 CDC42EP1 chr22 37560447 37569405 + protein_coding KNOWN OTTHUMG00000150591.3 8959 2573 10 ENSG00000100079.6 LGALS2 chr22 37570246 37582616 - protein_coding KNOWN OTTHUMG00000150590.21 12371 828 8 ENSG00000273866.1 Metazoa_SRP chr22 37578669 37578922 + misc_RNA NOVEL NA 254 254 1 ENSG00000143878.9 RHOB chr2 20447074 20449445 + protein_coding KNOWN OTTHUMG00000090755.3 2372 2372 1 ENSG00000100083.17 GGA1 chr22 37608475 37633564 + protein_coding KNOWN OTTHUMG00000030985.25 25090 9369 158 ENSG00000100092.19 SH3BP1 chr22 37634654 37666932 + protein_coding KNOWN OTTHUMG00000030996.5 32279 6170 98 ENSG00000233360.4 Z83844.1 chr22 37641832 37658377 - antisense NOVEL OTTHUMG00000150662.1 16546 1945 6 ENSG00000241360.1 PDXP chr22 37658727 37666934 + protein_coding KNOWN OTTHUMG00000044618.3 8208 2203 4 ENSG00000241333.3 RN7SL385P chr22 37669464 37669739 - misc_RNA KNOWN NA 276 276 1 ENSG00000100097.10 LGALS1 chr22 37675608 37679806 + protein_coding KNOWN OTTHUMG00000150661.1 4199 1099 25 ENSG00000273899.3 NOL12 chr22 37681673 37693478 + protein_coding KNOWN OTTHUMG00000150660.5 11806 3589 39 ENSG00000100101.14 RP1-37E16.12 chr22 37686414 37774130 + protein_coding NOVEL OTTHUMG00000188619.1 87717 8110 28 ENSG00000100106.18 TRIOBP chr22 37697004 37776556 + protein_coding KNOWN OTTHUMG00000150657.8 79553 12238 104 ENSG00000189060.5 H1F0 chr22 37805093 37807436 + protein_coding KNOWN OTTHUMG00000150659.1 2344 2344 1 ENSG00000228950.1 AC023137.2 chr2 20451042 20452947 + lincRNA NOVEL OTTHUMG00000151780.1 1906 308 2 ENSG00000100116.15 GCAT chr22 37807905 37817176 + protein_coding KNOWN OTTHUMG00000150664.3 9272 2104 37 ENSG00000128310.2 GALR3 chr22 37823382 37825495 + protein_coding KNOWN OTTHUMG00000150658.1 2114 1157 2 ENSG00000100124.11 ANKRD54 chr22 37830855 37849327 - protein_coding KNOWN OTTHUMG00000150663.4 18473 4487 73 ENSG00000207945.1 MIR658 chr22 37844272 37844371 - miRNA KNOWN NA 100 100 1 ENSG00000207696.1 MIR659 chr22 37847678 37847774 - miRNA KNOWN NA 97 97 1 ENSG00000100129.16 EIF3L chr22 37848868 37889407 + protein_coding KNOWN OTTHUMG00000150671.5 40540 4296 111 ENSG00000279738.1 RP5-1014D13.2 chr22 37876148 37895563 + sense_overlapping NOVEL OTTHUMG00000189205.1 19416 19416 1 ENSG00000207227.1 RNU6-900P chr22 37891347 37891448 + snRNA KNOWN NA 102 102 1 ENSG00000100139.12 MICALL1 chr22 37905657 37942822 + protein_coding KNOWN OTTHUMG00000150670.5 37166 5968 49 ENSG00000128346.9 C22orf23 chr22 37943050 37953669 - protein_coding KNOWN OTTHUMG00000150672.2 10620 2299 37 ENSG00000200829.1 Y_RNA chr2 20480844 20480955 + misc_RNA NOVEL NA 112 112 1 ENSG00000278948.1 RP5-1039K5.12 chr22 37943050 37944898 + TEC KNOWN OTTHUMG00000151195.1 1849 1849 1 ENSG00000280527.1 AL031587.1 chr22 37946326 37946426 + miRNA NOVEL NA 101 101 1 ENSG00000279010.1 RP5-1039K5.19 chr22 37948352 38002889 + sense_overlapping NOVEL OTTHUMG00000189201.1 54538 54538 1 ENSG00000272582.1 RP5-1039K5.17 chr22 37950965 37951778 + antisense NOVEL OTTHUMG00000186180.1 814 814 1 ENSG00000100142.13 POLR2F chr22 37952607 38041915 + protein_coding KNOWN OTTHUMG00000151160.3 89309 7042 62 ENSG00000277321.1 MIR6820 chr22 37967563 37967624 + miRNA KNOWN NA 62 62 1 ENSG00000100146.15 SOX10 chr22 37970686 37987422 - protein_coding KNOWN OTTHUMG00000149913.3 16737 3710 18 ENSG00000264505.1 MIR4534 chr22 37988794 37988853 + miRNA KNOWN NA 60 60 1 ENSG00000222044.1 RP5-1039K5.16 chr22 38032165 38034228 - antisense NOVEL OTTHUMG00000153513.2 2064 1055 2 ENSG00000273214.1 RP5-1039K5.18 chr22 38043230 38043920 + lincRNA NOVEL OTTHUMG00000186181.1 691 691 1 ENSG00000227047.1 AC012065.4 chr2 20499571 20501311 - lincRNA NOVEL OTTHUMG00000151781.1 1741 686 2 ENSG00000100151.14 PICK1 chr22 38056311 38075701 + protein_coding KNOWN OTTHUMG00000151159.3 19391 4371 101 ENSG00000233739.1 RP5-1039K5.13 chr22 38057180 38073940 - antisense NOVEL OTTHUMG00000151194.1 16761 414 2 ENSG00000100156.9 SLC16A8 chr22 38078134 38084093 - protein_coding KNOWN OTTHUMG00000151196.1 5960 2203 11 ENSG00000128298.15 BAIAP2L2 chr22 38084889 38110670 - protein_coding KNOWN OTTHUMG00000151197.4 25782 2146 33 ENSG00000272720.1 CTA-228A9.3 chr22 38090127 38091559 + lincRNA NOVEL OTTHUMG00000186146.1 1433 1433 1 ENSG00000184381.17 PLA2G6 chr22 38111495 38205690 - protein_coding KNOWN OTTHUMG00000151246.3 94196 6758 151 ENSG00000279080.1 CTA-228A9.4 chr22 38130216 38150612 + antisense NOVEL OTTHUMG00000189202.1 20397 20397 1 ENSG00000185022.10 MAFF chr22 38200767 38216511 + protein_coding KNOWN OTTHUMG00000151163.2 15745 5615 20 ENSG00000198792.11 TMEM184B chr22 38219291 38273034 - protein_coding KNOWN OTTHUMG00000030557.15 53744 5014 56 ENSG00000235246.1 RP1-5O6.5 chr22 38231320 38232248 + antisense NOVEL OTTHUMG00000151248.1 929 297 2 ENSG00000279307.1 AC012065.1 chr2 20529470 20529976 - processed_pseudogene NOVEL NA 507 507 1 ENSG00000241693.2 RN7SL704P chr22 38231720 38231993 + misc_RNA KNOWN NA 274 274 1 ENSG00000279038.1 RP1-5O6.6 chr22 38259960 38266759 - sense_intronic NOVEL OTTHUMG00000189308.1 6800 6800 1 ENSG00000265311.1 AL020993.1 chr22 38274339 38274424 - miRNA NOVEL NA 86 86 1 ENSG00000277385.1 Metazoa_SRP chr22 38281028 38281289 - misc_RNA NOVEL NA 262 262 1 ENSG00000213923.9 CSNK1E chr22 38290691 38398522 - protein_coding KNOWN OTTHUMG00000151135.3 107832 6700 106 ENSG00000244627.4 RP3-449O17.1 chr22 38335762 38398929 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000151245.2 63168 3851 52 ENSG00000229955.1 RP1-5O6.4 chr22 38387918 38388857 - sense_intronic NOVEL OTTHUMG00000151134.1 940 541 2 ENSG00000228620.1 RP3-434P1.6 chr22 38424288 38427336 + antisense NOVEL OTTHUMG00000151130.1 3049 556 3 ENSG00000168135.4 KCNJ4 chr22 38426327 38455199 - protein_coding KNOWN OTTHUMG00000151131.1 28873 2065 2 ENSG00000100196.9 KDELR3 chr22 38468062 38483447 + protein_coding KNOWN OTTHUMG00000153520.1 15386 1929 14 ENSG00000228327.2 RP11-206L10.2 chr1 764857 778626 - lincRNA NOVEL OTTHUMG00000002406.1 13770 1317 7 ENSG00000236698.1 EIF1AXP1 chr1 16685621 16686055 - processed_pseudogene KNOWN OTTHUMG00000002579.1 435 435 1 ENSG00000118960.11 HS1BP3 chr2 20560448 20651089 - protein_coding KNOWN OTTHUMG00000122099.2 90642 9059 32 ENSG00000100201.17 DDX17 chr22 38483440 38507660 - protein_coding KNOWN OTTHUMG00000151136.4 24221 9995 67 ENSG00000100206.8 DMC1 chr22 38518949 38570286 - protein_coding KNOWN OTTHUMG00000151088.16 51338 3524 59 ENSG00000224279.2 RP1-199H16.6 chr22 38574931 38575431 - processed_pseudogene KNOWN OTTHUMG00000155623.2 501 164 2 ENSG00000184949.14 FAM227A chr22 38578120 38656629 - protein_coding KNOWN OTTHUMG00000151133.6 78510 10781 106 ENSG00000100211.9 CBY1 chr22 38656636 38673854 + protein_coding KNOWN OTTHUMG00000150990.19 17219 2348 47 ENSG00000230912.1 RP3-508I15.10 chr22 38666508 38668750 - antisense NOVEL OTTHUMG00000150992.1 2243 410 2 ENSG00000228274.3 RP3-508I15.9 chr22 38667585 38681820 - antisense NOVEL OTTHUMG00000150989.7 14236 3358 8 ENSG00000100216.5 TOMM22 chr22 38681948 38685421 + protein_coding KNOWN OTTHUMG00000150991.2 3474 2191 7 ENSG00000100221.9 JOSD1 chr22 38685543 38701556 - protein_coding KNOWN OTTHUMG00000151030.17 16014 4326 26 ENSG00000100226.14 GTPBP1 chr22 38705723 38738299 + protein_coding KNOWN OTTHUMG00000151002.3 32577 8166 54 ENSG00000269976.1 RP11-130L8.2 chr2 20586248 20586686 - lincRNA NOVEL OTTHUMG00000183968.1 439 439 1 ENSG00000229598.1 PRDX3P1 chr22 38722743 38723505 - processed_pseudogene KNOWN OTTHUMG00000151027.1 763 763 1 ENSG00000244491.1 RP3-508I15.18 chr22 38734725 38738765 + antisense NOVEL OTTHUMG00000151086.1 4041 461 2 ENSG00000100242.14 SUN2 chr22 38734725 38794143 - protein_coding KNOWN OTTHUMG00000151031.9 59419 6489 130 ENSG00000230149.2 RP3-508I15.19 chr22 38734730 38738990 + antisense NOVEL OTTHUMG00000151089.1 4261 527 3 ENSG00000273096.1 RP3-508I15.20 chr22 38736610 38736792 - sense_intronic NOVEL OTTHUMG00000186187.1 183 183 1 ENSG00000225450.1 RP3-508I15.14 chr22 38739003 38749041 + antisense NOVEL OTTHUMG00000151003.1 10039 500 2 ENSG00000272669.1 RP3-508I15.21 chr22 38742625 38743115 + antisense NOVEL OTTHUMG00000186188.1 491 491 1 ENSG00000273076.1 RP3-508I15.22 chr22 38743495 38743910 + antisense NOVEL OTTHUMG00000186189.1 416 416 1 ENSG00000100246.11 DNAL4 chr22 38778508 38794198 - protein_coding KNOWN OTTHUMG00000151025.2 15691 2430 11 ENSG00000221890.2 NPTXR chr22 38818452 38843982 - protein_coding KNOWN OTTHUMG00000150458.2 25531 5784 5 ENSG00000231948.2 HS1BP3-IT1 chr2 20590775 20592548 - sense_intronic NOVEL OTTHUMG00000151789.2 1774 600 2 ENSG00000183741.10 CBX6 chr22 38861450 38872314 - protein_coding KNOWN OTTHUMG00000150456.2 10865 8030 14 ENSG00000235209.1 CTA-150C2.13 chr22 38921227 38924708 + lincRNA NOVEL OTTHUMG00000151001.1 3482 678 2 ENSG00000128383.11 APOBEC3A chr22 38952741 38992778 + protein_coding KNOWN OTTHUMG00000151004.2 40038 2358 20 ENSG00000179750.14 APOBEC3B chr22 38982347 38992804 + protein_coding KNOWN OTTHUMG00000151085.1 10458 1896 30 ENSG00000249310.2 APOBEC3B-AS1 chr22 38991559 38998209 - antisense NOVEL OTTHUMG00000151083.3 6651 691 5 ENSG00000244509.3 APOBEC3C chr22 39014083 39020352 + protein_coding KNOWN OTTHUMG00000151087.3 6270 2818 7 ENSG00000243811.6 APOBEC3D chr22 39014363 39033276 + protein_coding KNOWN OTTHUMG00000151084.2 18914 2545 22 ENSG00000128394.15 APOBEC3F chr22 39040604 39053910 + protein_coding KNOWN OTTHUMG00000151080.3 13307 3242 16 ENSG00000239713.6 APOBEC3G chr22 39040961 39087743 + protein_coding KNOWN OTTHUMG00000151081.4 46783 5454 33 ENSG00000259421.1 CTA-150C2.20 chr22 39070414 39070671 + unprocessed_pseudogene KNOWN OTTHUMG00000172255.2 258 258 1 ENSG00000233416.1 AC012065.5 chr2 20606280 20606654 - processed_pseudogene KNOWN OTTHUMG00000151784.1 375 375 1 ENSG00000225720.5 RP4-742C19.12 chr22 39091586 39092855 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000151191.2 1270 640 5 ENSG00000100298.14 APOBEC3H chr22 39097224 39104067 + protein_coding KNOWN OTTHUMG00000151082.6 6844 1251 30 ENSG00000100307.11 CBX7 chr22 39120167 39152674 - protein_coding KNOWN OTTHUMG00000150418.2 32508 7461 25 ENSG00000226024.1 COX5BP7 chr22 39120293 39120566 - processed_pseudogene KNOWN OTTHUMG00000151028.1 274 274 1 ENSG00000279833.1 RP4-742C19.13 chr22 39133090 39136760 + antisense NOVEL OTTHUMG00000189207.1 3671 3671 1 ENSG00000227009.1 FUNDC2P4 chr22 39155525 39155945 + processed_pseudogene KNOWN OTTHUMG00000151185.1 421 421 1 ENSG00000100311.15 PDGFB chr22 39223359 39244751 - protein_coding KNOWN OTTHUMG00000151029.14 21393 3761 24 ENSG00000224794.1 RP3-333H23.8 chr22 39292988 39295563 + antisense NOVEL OTTHUMG00000153516.1 2576 1778 2 ENSG00000100316.14 RPL3 chr22 39312882 39320389 - protein_coding KNOWN OTTHUMG00000151079.8 7508 4787 80 ENSG00000209480.1 SNORD83B chr22 39313819 39313911 - snoRNA KNOWN NA 93 93 1 ENSG00000143869.6 GDF7 chr2 20666664 20679245 + protein_coding KNOWN OTTHUMG00000090781.3 12582 9749 2 ENSG00000209482.1 SNORD83A chr22 39315213 39315307 - snoRNA KNOWN NA 95 95 1 ENSG00000280859.1 AL022326.1 chr22 39319019 39319147 - miRNA NOVEL NA 129 129 1 ENSG00000263764.1 SNORD43 chr22 39319050 39319113 - snoRNA KNOWN NA 64 64 1 ENSG00000100321.13 SYNGR1 chr22 39349925 39385588 + protein_coding KNOWN OTTHUMG00000030978.4 35664 6953 25 ENSG00000280216.1 RP3-333H23.9 chr22 39379610 39380015 + TEC KNOWN OTTHUMG00000184136.1 406 406 1 ENSG00000100324.12 TAB1 chr22 39399741 39437060 + protein_coding KNOWN OTTHUMG00000151102.2 37320 4456 36 ENSG00000128268.11 MGAT3 chr22 39457344 39492194 + protein_coding KNOWN OTTHUMG00000030185.4 34851 5457 7 ENSG00000227188.1 MGAT3-AS1 chr22 39475807 39476822 - antisense NOVEL OTTHUMG00000151100.1 1016 498 2 ENSG00000100335.11 MIEF1 chr22 39499432 39518132 + protein_coding KNOWN OTTHUMG00000151105.1 18701 7555 61 ENSG00000128272.13 ATF4 chr22 39519695 39522685 + protein_coding KNOWN OTTHUMG00000151099.2 2991 2514 9 ENSG00000270100.1 RP11-130L8.1 chr2 20678254 20678932 - lincRNA NOVEL OTTHUMG00000183969.1 679 679 1 ENSG00000187051.7 RPS19BP1 chr22 39529093 39532855 - protein_coding KNOWN OTTHUMG00000151101.1 3763 3763 19 ENSG00000100346.16 CACNA1I chr22 39570753 39689737 + protein_coding KNOWN OTTHUMG00000151096.1 118985 10792 146 ENSG00000176177.9 ENTHD1 chr22 39743044 39893864 - protein_coding KNOWN OTTHUMG00000151098.1 150821 3068 9 ENSG00000235647.1 RP1-172B20.6 chr22 39750127 39751293 + processed_pseudogene KNOWN OTTHUMG00000155619.1 1167 1167 1 ENSG00000238875.1 RN7SKP210 chr22 39874255 39874515 - misc_RNA KNOWN NA 261 261 1 ENSG00000226085.3 UQCRFS1P1 chr22 39875289 39876108 + processed_pseudogene KNOWN OTTHUMG00000151103.1 820 820 1 ENSG00000100351.15 GRAP2 chr22 39901082 39973721 + protein_coding KNOWN OTTHUMG00000151097.1 72640 6190 29 ENSG00000225528.1 RP3-370M22.8 chr22 39960397 39964683 + sense_intronic NOVEL OTTHUMG00000151104.1 4287 1287 2 ENSG00000133477.15 FAM83F chr22 39994949 40043529 + protein_coding KNOWN OTTHUMG00000150688.4 48581 16389 13 ENSG00000261202.1 RP3-496C20.1 chr22 40043068 40044530 - antisense NOVEL OTTHUMG00000172747.1 1463 1463 1 ENSG00000118961.13 C2orf43 chr2 20684014 20823130 - protein_coding KNOWN OTTHUMG00000122097.5 139117 4433 73 ENSG00000100354.19 TNRC6B chr22 40044817 40335808 + protein_coding KNOWN OTTHUMG00000151114.7 290992 19998 123 ENSG00000228599.1 RPL7P52 chr22 40106325 40107066 - processed_pseudogene KNOWN OTTHUMG00000151113.1 742 742 1 ENSG00000239900.10 ADSL chr22 40346500 40369367 + protein_coding KNOWN OTTHUMG00000166425.8 22868 5632 97 ENSG00000279624.2 RP5-1042K10.14 chr22 40364958 40404362 + protein_coding NOVEL OTTHUMG00000189298.2 39405 780 9 ENSG00000100359.19 SGSM3 chr22 40370591 40410289 + protein_coding KNOWN OTTHUMG00000151141.13 39699 4770 106 ENSG00000229999.5 RP5-1042K10.10 chr22 40372664 40388290 - antisense NOVEL OTTHUMG00000151143.6 15627 893 10 ENSG00000196588.13 MKL1 chr22 40410281 40636702 - protein_coding KNOWN OTTHUMG00000151146.7 226422 6602 113 ENSG00000272834.1 RP5-1042K10.13 chr22 40415003 40415445 + antisense NOVEL OTTHUMG00000186106.1 443 443 1 ENSG00000227413.1 RP5-1042K10.12 chr22 40433136 40433641 + processed_pseudogene KNOWN OTTHUMG00000155621.1 506 355 2 ENSG00000232564.2 RP4-591N18.2 chr22 40521800 40561397 + antisense NOVEL OTTHUMG00000151147.4 39598 2483 11 ENSG00000236436.1 AC012361.1 chr2 20859771 20861661 + lincRNA NOVEL OTTHUMG00000151783.1 1891 1498 2 ENSG00000252124.1 AL031594.1 chr22 40528057 40528133 - miRNA NOVEL NA 77 77 1 ENSG00000172912.4 COX6B1P3 chr22 40569286 40569895 + processed_pseudogene KNOWN OTTHUMG00000151144.1 610 260 2 ENSG00000230071.2 RPL4P6 chr22 40586700 40588003 - processed_pseudogene KNOWN OTTHUMG00000151142.2 1304 1304 1 ENSG00000231907.2 GAPDHP37 chr22 40673484 40674451 - processed_pseudogene KNOWN OTTHUMG00000151145.2 968 968 1 ENSG00000128285.4 MCHR1 chr22 40678750 40682814 + protein_coding KNOWN OTTHUMG00000150256.1 4065 2961 9 ENSG00000100372.13 SLC25A17 chr22 40769630 40819399 - protein_coding KNOWN OTTHUMG00000151139.2 49770 3989 115 ENSG00000230769.1 RP3-408N23.4 chr22 40788777 40789267 - processed_pseudogene KNOWN OTTHUMG00000151140.1 491 491 1 ENSG00000233603.1 JTBP1 chr22 40798039 40798285 + processed_pseudogene KNOWN OTTHUMG00000155620.1 247 247 1 ENSG00000266594.1 MIR4766 chr22 40813883 40813958 - miRNA KNOWN NA 76 76 1 ENSG00000100380.11 ST13 chr22 40824535 40857022 - protein_coding KNOWN OTTHUMG00000151201.1 32488 4147 65 ENSG00000261012.2 RP11-116D2.1 chr2 20999313 21000917 - lincRNA NOVEL OTTHUMG00000175749.2 1605 1605 1 ENSG00000196236.11 XPNPEP3 chr22 40857077 40932815 + protein_coding KNOWN OTTHUMG00000151312.5 75739 9574 32 ENSG00000172404.4 DNAJB7 chr22 40859549 40862126 - protein_coding KNOWN OTTHUMG00000151202.1 2578 2578 1 ENSG00000273979.1 Metazoa_SRP chr22 40917111 40917381 + misc_RNA NOVEL NA 271 271 1 ENSG00000200683.1 RNU6-379P chr22 40917743 40917846 + snRNA KNOWN NA 104 104 1 ENSG00000100387.8 RBX1 chr22 40951347 40973309 + protein_coding KNOWN OTTHUMG00000151298.3 21963 3092 10 ENSG00000222698.1 Y_RNA chr22 41045497 41045591 + misc_RNA NOVEL NA 95 95 1 ENSG00000280863.1 AL080243.1 chr22 41060632 41060701 - miRNA NOVEL NA 70 70 1 ENSG00000237214.3 RP11-12M9.3 chr22 41064052 41064633 + processed_pseudogene KNOWN OTTHUMG00000150944.1 582 582 1 ENSG00000199515.1 Y_RNA chr22 41065554 41065646 - misc_RNA NOVEL NA 93 93 1 ENSG00000213857.3 RP11-12M9.4 chr22 41074180 41075239 - processed_pseudogene KNOWN OTTHUMG00000150938.1 1060 1060 1 ENSG00000084674.12 APOB chr2 21001429 21044073 - protein_coding KNOWN OTTHUMG00000090785.3 42645 14828 76 ENSG00000100393.9 EP300 chr22 41091786 41180077 + protein_coding KNOWN OTTHUMG00000150937.1 88292 9585 31 ENSG00000221160.1 MIR1281 chr22 41092513 41092566 + miRNA KNOWN NA 54 54 1 ENSG00000252859.1 RNU6-375P chr22 41168217 41168316 + snRNA KNOWN NA 100 100 1 ENSG00000232754.1 RP1-85F18.6 chr22 41169190 41183144 - antisense NOVEL OTTHUMG00000150939.1 13955 357 3 ENSG00000231993.1 EP300-AS1 chr22 41174591 41197456 - antisense NOVEL OTTHUMG00000150941.1 22866 457 3 ENSG00000215771.2 LRRC37A14P chr22 41189727 41190188 - processed_pseudogene KNOWN OTTHUMG00000150935.2 462 462 1 ENSG00000100395.13 L3MBTL2 chr22 41205205 41231271 + protein_coding KNOWN OTTHUMG00000150942.1 26067 6451 102 ENSG00000235513.1 RP4-756G23.5 chr22 41209122 41217627 - antisense NOVEL OTTHUMG00000150943.1 8506 2500 6 ENSG00000100399.14 CHADL chr22 41229510 41240934 - protein_coding KNOWN OTTHUMG00000150936.2 11425 2599 15 ENSG00000100401.18 RANGAP1 chr22 41245611 41286251 - protein_coding KNOWN OTTHUMG00000150940.11 40641 5348 67 ENSG00000268869.4 ESPNP chr1 16687339 16720157 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000000803.5 32819 3178 17 ENSG00000280390.1 AC010872.1 chr2 21023496 21024170 + TEC KNOWN OTTHUMG00000151794.2 675 675 1 ENSG00000274552.1 MIR6889 chr22 41252992 41253050 - miRNA KNOWN NA 59 59 1 ENSG00000100403.11 ZC3H7B chr22 41301522 41360147 + protein_coding KNOWN OTTHUMG00000150969.2 58626 10525 30 ENSG00000167074.13 TEF chr22 41367333 41399326 + protein_coding KNOWN OTTHUMG00000150968.1 31994 4715 11 ENSG00000199865.1 RNU6-495P chr22 41377177 41377283 - snRNA KNOWN NA 107 107 1 ENSG00000273424.1 CTA-223H9.9 chr22 41430934 41431375 + lincRNA NOVEL OTTHUMG00000186116.1 442 442 1 ENSG00000183864.4 TOB2 chr22 41433492 41447023 - protein_coding KNOWN OTTHUMG00000150970.1 13532 4565 4 ENSG00000100410.6 PHF5A chr22 41459717 41468725 - protein_coding KNOWN OTTHUMG00000150966.1 9009 1235 12 ENSG00000100412.14 ACO2 chr22 41469125 41528989 + protein_coding KNOWN OTTHUMG00000030544.3 59865 4041 53 ENSG00000100413.15 POLR3H chr22 41525804 41544606 - protein_coding KNOWN OTTHUMG00000150971.1 18803 6594 48 ENSG00000172346.13 CSDC2 chr22 41560763 41577741 + protein_coding KNOWN OTTHUMG00000150967.4 16979 3250 7 ENSG00000218819.4 TDRD15 chr2 21123917 21143272 + protein_coding KNOWN OTTHUMG00000151795.1 19356 6135 5 ENSG00000100417.10 PMM1 chr22 41576894 41589890 - protein_coding KNOWN OTTHUMG00000150972.3 12997 5082 48 ENSG00000100418.7 DESI1 chr22 41598028 41621096 - protein_coding KNOWN OTTHUMG00000044632.4 23069 4972 13 ENSG00000196419.11 XRCC6 chr22 41621119 41664048 + protein_coding KNOWN OTTHUMG00000151190.3 42930 3288 80 ENSG00000200332.1 Y_RNA chr22 41648089 41648190 - misc_RNA NOVEL NA 102 102 1 ENSG00000100138.12 NHP2L1 chr22 41673930 41690504 - protein_coding KNOWN OTTHUMG00000151189.2 16575 2780 25 ENSG00000207457.1 RNU6-476P chr22 41679711 41679817 + snRNA KNOWN NA 107 107 1 ENSG00000184208.10 C22orf46 chr22 41688939 41698136 + protein_coding KNOWN OTTHUMG00000151188.4 9198 5341 5 ENSG00000167077.11 MEI1 chr22 41699499 41799456 + protein_coding KNOWN OTTHUMG00000030083.4 99958 5393 114 ENSG00000231261.1 HMGN2P10 chr22 41709225 41709489 - processed_pseudogene KNOWN OTTHUMG00000151187.1 265 265 1 ENSG00000252603.1 RNU6ATAC22P chr22 41722043 41722131 - snRNA KNOWN NA 89 89 1 ENSG00000271629.1 RP11-79J24.1 chr2 21198518 21198896 - processed_pseudogene KNOWN OTTHUMG00000184434.1 379 379 1 ENSG00000206813.1 Y_RNA chr22 41747312 41747413 + misc_RNA NOVEL NA 102 102 1 ENSG00000100147.12 CCDC134 chr22 41800679 41826299 + protein_coding KNOWN OTTHUMG00000151262.1 25621 1270 11 ENSG00000184068.2 RP5-821D11.7 chr22 41831215 41834665 - antisense NOVEL OTTHUMG00000151272.1 3451 2989 2 ENSG00000198911.10 SREBF2 chr22 41833079 41907308 + protein_coding KNOWN OTTHUMG00000151261.1 74230 7557 89 ENSG00000207932.1 MIR33A chr22 41900944 41901012 + miRNA KNOWN NA 69 69 1 ENSG00000234965.2 SHISA8 chr22 41909554 41914667 - protein_coding KNOWN OTTHUMG00000151273.4 5114 1405 6 ENSG00000159958.4 TNFRSF13C chr22 41922023 41926818 - protein_coding KNOWN OTTHUMG00000151271.2 4796 3944 3 ENSG00000263463.1 MIR378I chr22 41923222 41923297 - miRNA KNOWN NA 76 76 1 ENSG00000100162.13 CENPM chr22 41938721 41947164 - protein_coding KNOWN OTTHUMG00000151277.2 8444 1778 33 ENSG00000205704.6 LINC00634 chr22 41952165 41958933 + unitary_pseudogene KNOWN OTTHUMG00000151274.2 6769 1521 4 ENSG00000233005.1 AC067959.1 chr2 21221175 21970959 + lincRNA NOVEL OTTHUMG00000151796.2 749785 882 8 ENSG00000100167.18 SEPT3 chr22 41976272 41998221 + protein_coding KNOWN OTTHUMG00000030494.3 21950 5427 49 ENSG00000224883.1 CTA-250D10.19 chr22 41981304 41982217 - antisense NOVEL OTTHUMG00000151275.1 914 515 3 ENSG00000183066.13 WBP2NL chr22 41998725 42058456 + protein_coding KNOWN OTTHUMG00000151270.1 59732 6180 59 ENSG00000215347.3 SLC25A5P1 chr22 42001069 42001966 - processed_pseudogene KNOWN OTTHUMG00000151288.1 898 898 1 ENSG00000198951.10 NAGA chr22 42058354 42070842 - protein_coding KNOWN OTTHUMG00000151276.2 12489 3706 29 ENSG00000177096.7 FAM109B chr22 42074251 42079441 + protein_coding KNOWN OTTHUMG00000151285.1 5191 2451 6 ENSG00000238498.1 snoU13 chr22 42076058 42076161 - snoRNA NOVEL NA 104 104 1 ENSG00000183172.8 SMDT1 chr22 42079691 42084284 + protein_coding KNOWN OTTHUMG00000151286.3 4594 1731 8 ENSG00000184983.8 NDUFA6 chr22 42085525 42090955 - protein_coding KNOWN OTTHUMG00000151287.4 5431 1416 11 ENSG00000270083.1 RP1-257I20.14 chr22 42089630 42090028 - sense_intronic KNOWN OTTHUMG00000184054.1 399 399 1 ENSG00000231204.4 AC011752.1 chr2 21317660 21561313 + lincRNA NOVEL OTTHUMG00000151793.2 243654 1076 9 ENSG00000237037.8 NDUFA6-AS1 chr22 42090931 42137742 + processed_transcript NOVEL OTTHUMG00000150917.9 46812 5206 79 ENSG00000213790.2 OLA1P1 chr22 42107765 42108953 - processed_pseudogene KNOWN OTTHUMG00000151284.1 1189 1189 1 ENSG00000100197.19 CYP2D6 chr22 42126499 42130906 - protein_coding KNOWN OTTHUMG00000150918.3 4408 2443 42 ENSG00000227370.1 RP4-669P10.19 chr22 42132543 42132998 + processed_pseudogene KNOWN OTTHUMG00000155612.2 456 456 1 ENSG00000232710.1 RP4-669P10.16 chr22 42136433 42139927 - lincRNA KNOWN OTTHUMG00000189689.1 3495 667 3 ENSG00000281538.1 RP4-669P10.20 chr22 42138060 42139726 + lincRNA KNOWN OTTHUMG00000150921.3 1667 631 2 ENSG00000205702.9 CYP2D7 chr22 42140203 42144577 - polymorphic_pseudogene KNOWN OTTHUMG00000030222.7 4375 2260 54 ENSG00000226450.2 CYP2D8P chr22 42149886 42155001 - unprocessed_pseudogene KNOWN OTTHUMG00000150922.2 5116 1490 9 ENSG00000100207.17 TCF20 chr22 42160013 42343616 - protein_coding KNOWN OTTHUMG00000150920.2 183604 7548 16 ENSG00000182057.4 OGFRP1 chr22 42269753 42275196 + lincRNA NOVEL OTTHUMG00000150700.1 5444 1451 8 ENSG00000270654.1 NUTF2P8 chr2 21362292 21364025 - processed_pseudogene KNOWN OTTHUMG00000184437.1 1734 363 2 ENSG00000233903.2 Z83851.4 chr22 42276355 42277052 + lincRNA NOVEL OTTHUMG00000150697.2 698 545 2 ENSG00000273366.1 CTA-989H11.1 chr22 42278188 42278846 + lincRNA NOVEL OTTHUMG00000186179.1 659 659 1 ENSG00000229891.1 LINC01315 chr22 42364400 42369236 - lincRNA NOVEL OTTHUMG00000150696.1 4837 1267 6 ENSG00000235568.5 NFAM1 chr22 42380410 42432395 - protein_coding KNOWN OTTHUMG00000150923.1 51986 5817 9 ENSG00000230107.1 CTA-126B4.7 chr22 42438023 42446195 + lincRNA NOVEL OTTHUMG00000150919.1 8173 572 4 ENSG00000172250.13 SERHL chr22 42500579 42512560 + processed_transcript KNOWN OTTHUMG00000150888.3 11982 1742 24 ENSG00000189306.9 RRP7A chr22 42509968 42519802 - protein_coding KNOWN OTTHUMG00000150891.1 9835 4082 17 ENSG00000265106.1 Z93241.1 chr22 42552188 42552273 - miRNA NOVEL NA 86 86 1 ENSG00000183569.16 SERHL2 chr22 42553617 42574382 + protein_coding KNOWN OTTHUMG00000150892.2 20766 2821 91 ENSG00000182841.11 RRP7B chr22 42555223 42582038 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000150889.3 26816 5092 34 ENSG00000235537.1 AC009411.2 chr2 21630548 21636309 - lincRNA NOVEL OTTHUMG00000151806.1 5762 539 3 ENSG00000202058.1 RN7SKP80 chr22 42565048 42565330 - misc_RNA KNOWN NA 283 283 1 ENSG00000251913.1 RNU6-513P chr22 42569147 42569250 - snRNA KNOWN NA 104 104 1 ENSG00000100227.16 POLDIP3 chr22 42583721 42614962 - protein_coding KNOWN OTTHUMG00000150887.2 31242 3650 59 ENSG00000276027.1 RNU12 chr22 42615244 42615393 + snRNA KNOWN NA 150 150 1 ENSG00000270022.3 RNU12 chr22 42615244 42615907 + lincRNA KNOWN OTTHUMG00000183993.1 664 664 1 ENSG00000100243.19 CYB5R3 chr22 42617840 42649568 - protein_coding KNOWN OTTHUMG00000150745.5 31729 5973 60 ENSG00000249222.1 ATP5L2 chr22 42639803 42640601 - protein_coding KNOWN OTTHUMG00000150890.2 799 799 1 ENSG00000128274.14 A4GALT chr22 42692121 42721298 - protein_coding KNOWN OTTHUMG00000150744.2 29178 2943 10 ENSG00000200448.1 Y_RNA chr22 42762860 42762959 - misc_RNA NOVEL NA 100 100 1 ENSG00000234009.1 RPL5P34 chr22 42776406 42777296 - processed_pseudogene KNOWN OTTHUMG00000150746.1 891 891 1 ENSG00000228538.4 AC009411.1 chr2 21638431 21649563 - lincRNA NOVEL OTTHUMG00000151809.1 11133 548 6 ENSG00000229608.1 GOLGA2P4 chr22 42784462 42787100 + unprocessed_pseudogene KNOWN OTTHUMG00000150747.1 2639 777 7 ENSG00000274717.1 RP1-47A17.1 chr22 42791814 42794313 - processed_pseudogene KNOWN OTTHUMG00000188039.1 2500 1596 3 ENSG00000242247.9 ARFGAP3 chr22 42796502 42858106 - protein_coding KNOWN OTTHUMG00000150718.11 61605 3381 51 ENSG00000100266.16 PACSIN2 chr22 42835412 43015145 - protein_coding KNOWN OTTHUMG00000150701.5 179734 4548 77 ENSG00000226989.1 AL049758.2 chr22 42853403 42853799 - processed_pseudogene KNOWN OTTHUMG00000150717.1 397 397 1 ENSG00000230319.1 AL022476.2 chr22 43038585 43052366 + antisense NOVEL OTTHUMG00000150695.1 13782 2083 3 ENSG00000100271.15 TTLL1 chr22 43039644 43089428 - protein_coding KNOWN OTTHUMG00000150699.2 49785 1749 43 ENSG00000234735.1 AL022237.3 chr22 43092167 43092524 + processed_pseudogene KNOWN OTTHUMG00000150698.1 358 358 1 ENSG00000100290.2 BIK chr22 43110748 43129712 + protein_coding KNOWN OTTHUMG00000150703.1 18965 953 5 ENSG00000100294.11 MCAT chr22 43132206 43143394 - protein_coding KNOWN OTTHUMG00000150704.2 11189 2388 11 ENSG00000229621.1 AC018742.1 chr2 21687434 21710623 - lincRNA NOVEL OTTHUMG00000151807.1 23190 2098 3 ENSG00000100300.16 TSPO chr22 43151514 43163242 + protein_coding KNOWN OTTHUMG00000150573.7 11729 1455 20 ENSG00000100304.12 TTLL12 chr22 43166622 43187133 - protein_coding KNOWN OTTHUMG00000150682.3 20512 4622 24 ENSG00000159307.17 SCUBE1 chr22 43197283 43343388 - protein_coding KNOWN OTTHUMG00000150679.4 146106 12135 54 ENSG00000236272.1 Z82214.3 chr22 43212674 43213661 + antisense NOVEL OTTHUMG00000150678.1 988 531 2 ENSG00000234892.1 Z82214.2 chr22 43232141 43239010 + antisense NOVEL OTTHUMG00000150676.1 6870 988 3 ENSG00000203527.2 Z99756.1 chr22 43275955 43283830 + antisense NOVEL OTTHUMG00000150677.1 7876 1951 2 ENSG00000236117.1 RP4-754E20__A.5 chr22 43400331 43409681 + lincRNA NOVEL OTTHUMG00000150565.1 9351 951 4 ENSG00000186732.12 MPPED1 chr22 43411196 43507848 + protein_coding KNOWN OTTHUMG00000150566.6 96653 5821 24 ENSG00000223843.4 EFCAB6-AS1 chr22 43516107 43537117 + antisense NOVEL OTTHUMG00000150523.5 21011 2656 3 ENSG00000186976.13 EFCAB6 chr22 43528744 43812337 - protein_coding KNOWN OTTHUMG00000150522.3 283594 8557 116 ENSG00000264192.1 RN7SL117P chr2 21922993 21923288 + misc_RNA KNOWN NA 296 296 1 ENSG00000233157.1 RP3-388M5.8 chr22 43759199 43759910 - processed_pseudogene KNOWN OTTHUMG00000155610.1 712 712 1 ENSG00000180150.5 HMGN2P9 chr22 43802544 43802772 + processed_pseudogene KNOWN OTTHUMG00000030777.3 229 229 1 ENSG00000261251.1 RP3-388M5.9 chr22 43812456 43817394 + antisense NOVEL OTTHUMG00000172728.1 4939 1981 3 ENSG00000130540.12 SULT4A1 chr22 43824509 43862503 - protein_coding KNOWN OTTHUMG00000141314.2 37995 2849 24 ENSG00000100341.10 PNPLA5 chr22 43879678 43892013 - protein_coding KNOWN OTTHUMG00000030779.9 12336 2544 37 ENSG00000266837.1 Z97055.1 chr22 43904596 43904681 - miRNA NOVEL NA 86 86 1 ENSG00000100344.9 PNPLA3 chr22 43923739 43964488 + protein_coding KNOWN OTTHUMG00000150555.2 40750 3232 36 ENSG00000100347.13 SAMM50 chr22 43955421 44010531 + protein_coding KNOWN OTTHUMG00000150557.4 55111 6435 38 ENSG00000224856.2 RP4-796I17.5 chr22 43957027 43957348 + processed_pseudogene KNOWN OTTHUMG00000150556.2 322 322 1 ENSG00000188677.13 PARVB chr22 43999211 44172949 + protein_coding KNOWN OTTHUMG00000150665.4 173739 7403 75 ENSG00000279151.1 RP1-163M9.7 chr1 16701546 16705594 + lincRNA NOVEL OTTHUMG00000189501.1 4049 406 3 ENSG00000231200.1 AC068490.2 chr2 21933336 22531105 - lincRNA NOVEL OTTHUMG00000151808.2 597770 636 5 ENSG00000279175.1 CTA-414D7.1 chr22 44102779 44116232 + sense_intronic NOVEL OTTHUMG00000189192.1 13454 13454 1 ENSG00000280434.1 RP4-671O14.6 chr22 44139365 44153626 + sense_overlapping NOVEL OTTHUMG00000189193.1 14262 14262 1 ENSG00000138964.15 PARVG chr22 44172956 44219533 + protein_coding KNOWN OTTHUMG00000150473.7 46578 8656 91 ENSG00000279933.1 RP4-671O14.5 chr22 44183031 44187739 - TEC KNOWN OTTHUMG00000186160.2 4709 4709 1 ENSG00000280011.1 RP4-671O14.7 chr22 44210442 44229512 - antisense NOVEL OTTHUMG00000189263.1 19071 19071 1 ENSG00000138944.7 KIAA1644 chr22 44243667 44312851 - protein_coding KNOWN OTTHUMG00000030991.2 69185 6751 5 ENSG00000220702.1 RP1-32I10.10 chr22 44365551 44366284 + lincRNA NOVEL OTTHUMG00000150464.1 734 606 2 ENSG00000236079.1 RP1-32I10.11 chr22 44413485 44414814 - processed_pseudogene KNOWN OTTHUMG00000150466.1 1330 452 2 ENSG00000232655.1 CTA-397C4.2 chr22 44443327 44444788 + lincRNA NOVEL OTTHUMG00000150468.1 1462 630 3 ENSG00000228807.1 MRPS18CP6 chr22 44483495 44483717 - processed_pseudogene KNOWN OTTHUMG00000150467.1 223 223 1 ENSG00000228999.1 AC068490.1 chr2 21944609 21965551 - lincRNA NOVEL OTTHUMG00000151805.1 20943 579 2 ENSG00000279642.1 RP5-1033E15.3 chr22 44486295 44486914 - TEC KNOWN OTTHUMG00000172745.1 620 620 1 ENSG00000188636.3 LDOC1L chr22 44492572 44498298 - protein_coding KNOWN OTTHUMG00000150465.1 5727 5495 2 ENSG00000215333.3 KRT18P23 chr22 44566965 44568247 + processed_pseudogene KNOWN OTTHUMG00000150459.1 1283 1283 1 ENSG00000187012.9 LINC00207 chr22 44569339 44572341 + lincRNA KNOWN OTTHUMG00000150462.2 3003 914 16 ENSG00000234300.1 LINC00229 chr22 44606939 44625419 - lincRNA NOVEL OTTHUMG00000149974.1 18481 500 4 ENSG00000231801.2 ANP32BP2 chr22 44651835 44652379 + processed_pseudogene KNOWN OTTHUMG00000150461.2 545 545 1 ENSG00000186654.19 PRR5 chr22 44668547 44737681 + protein_coding KNOWN OTTHUMG00000150460.4 69135 5247 129 ENSG00000248405.8 PRR5-ARHGAP8 chr22 44702233 44862784 + protein_coding KNOWN OTTHUMG00000160954.1 160552 3342 96 ENSG00000241484.8 ARHGAP8 chr22 44752558 44862788 + protein_coding KNOWN OTTHUMG00000030234.12 110231 4990 90 ENSG00000056487.14 PHF21B chr22 44881162 45009999 - protein_coding KNOWN OTTHUMG00000151199.3 128838 5753 85 ENSG00000223691.1 AC068044.1 chr2 22188336 22190313 + processed_pseudogene KNOWN OTTHUMG00000151812.1 1978 1978 1 ENSG00000223730.1 RP1-127B20.4 chr22 44901547 44902471 + transcribed_processed_pseudogene KNOWN OTTHUMG00000151198.2 925 925 2 ENSG00000230922.1 RP4-753M9.1 chr22 45000565 45003619 - sense_intronic NOVEL OTTHUMG00000153503.1 3055 1633 3 ENSG00000226328.5 NUP50-AS1 chr22 45133020 45163781 - lincRNA NOVEL OTTHUMG00000151264.3 30762 2263 8 ENSG00000273243.1 CTA-217C2.2 chr22 45155539 45156011 - lincRNA NOVEL OTTHUMG00000186136.1 473 473 1 ENSG00000093000.17 NUP50 chr22 45163841 45188015 + protein_coding KNOWN OTTHUMG00000151265.3 24175 8318 88 ENSG00000273353.1 CTA-268H5.12 chr22 45178990 45179310 + sense_intronic NOVEL OTTHUMG00000186137.1 321 321 1 ENSG00000100364.17 KIAA0930 chr22 45190338 45240769 - protein_coding KNOWN OTTHUMG00000151263.3 50432 10019 91 ENSG00000221598.2 MIR1249 chr22 45200938 45201049 - miRNA KNOWN NA 112 112 1 ENSG00000273287.2 CTA-268H5.14 chr22 45262273 45263585 - lincRNA NOVEL OTTHUMG00000186139.2 1313 1313 1 ENSG00000213752.3 CTA-268H5.9 chr22 45275599 45276085 + processed_pseudogene KNOWN OTTHUMG00000151335.2 487 487 1 ENSG00000277951.1 AC116176.1 chr2 22239149 22239243 - miRNA NOVEL NA 95 95 1 ENSG00000100373.8 UPK3A chr22 45284982 45295874 + protein_coding KNOWN OTTHUMG00000151339.1 10893 1051 10 ENSG00000100376.10 FAM118A chr22 45308968 45341955 + protein_coding KNOWN OTTHUMG00000151338.2 32988 6512 68 ENSG00000077935.15 SMC1B chr22 45344063 45413619 - protein_coding KNOWN OTTHUMG00000151334.3 69557 4253 48 ENSG00000128408.8 RIBC2 chr22 45413691 45432496 + protein_coding KNOWN OTTHUMG00000151332.3 18806 1815 14 ENSG00000232363.1 RP1-102D24.5 chr22 45435864 45448743 - antisense NOVEL OTTHUMG00000151333.1 12880 545 2 ENSG00000077942.16 FBLN1 chr22 45502238 45601135 + protein_coding KNOWN OTTHUMG00000151340.2 98898 7128 131 ENSG00000238120.1 CTA-941F9.9 chr22 45604432 45605621 - antisense NOVEL OTTHUMG00000151331.1 1190 548 2 ENSG00000251985.1 RNU6-1161P chr22 45624531 45624632 - snRNA KNOWN NA 102 102 1 ENSG00000280383.1 CTA-941F9.10 chr22 45657019 45680130 + sense_overlapping NOVEL OTTHUMG00000189269.1 23112 23112 1 ENSG00000130638.14 ATXN10 chr22 45671798 45845307 + protein_coding KNOWN OTTHUMG00000150451.2 173510 5098 62 ENSG00000234189.1 AC099799.1 chr2 22317053 22317244 + processed_pseudogene KNOWN OTTHUMG00000151814.1 192 192 1 ENSG00000264160.1 MIR4762 chr22 45760524 45760598 + miRNA KNOWN NA 75 75 1 ENSG00000235347.1 RP1-37M3.8 chr22 45792418 45793636 - processed_pseudogene KNOWN OTTHUMG00000151337.2 1219 1219 1 ENSG00000279954.1 WI2-85898F10.2 chr22 45875932 45879247 + antisense NOVEL OTTHUMG00000189275.1 3316 3316 1 ENSG00000235091.1 WI2-85898F10.1 chr22 45875999 45887748 - lincRNA NOVEL OTTHUMG00000150449.1 11750 805 3 ENSG00000188064.8 WNT7B chr22 45920362 45977129 - protein_coding KNOWN OTTHUMG00000154636.1 56768 5051 19 ENSG00000265610.1 CR536603.1 chr22 45976878 45976954 - miRNA NOVEL NA 77 77 1 ENSG00000280424.1 CITF22-92A6.2 chr22 46006616 46010777 + TEC KNOWN OTTHUMG00000186190.1 4162 4162 1 ENSG00000273145.1 CITF22-92A6.1 chr22 46013606 46015498 + lincRNA NOVEL OTTHUMG00000170172.1 1893 1207 2 ENSG00000231711.2 LINC00899 chr22 46039907 46044853 - processed_transcript NOVEL OTTHUMG00000150406.2 4947 4947 8 ENSG00000182257.6 PRR34 chr22 46049478 46054144 - protein_coding KNOWN OTTHUMG00000150407.1 4667 2817 2 ENSG00000206882.1 RNA5SP87 chr2 22338886 22339003 - rRNA KNOWN NA 118 118 1 ENSG00000273289.1 RP6-109B7.5 chr22 46053093 46053560 + antisense NOVEL OTTHUMG00000186115.1 468 468 1 ENSG00000241990.4 PRR34-AS1 chr22 46053705 46057210 + antisense NOVEL OTTHUMG00000150198.2 3506 1093 10 ENSG00000197182.11 MIRLET7BHG chr22 46053869 46113928 + lincRNA KNOWN OTTHUMG00000150446.2 60060 5728 19 ENSG00000231010.1 RP6-109B7.2 chr22 46055740 46058160 - lincRNA NOVEL OTTHUMG00000150444.1 2421 1181 2 ENSG00000235159.1 RP6-109B7.4 chr22 46067356 46069891 - lincRNA NOVEL OTTHUMG00000150445.1 2536 867 3 ENSG00000266533.1 MIR3619 chr22 46091044 46091126 + miRNA KNOWN NA 83 83 1 ENSG00000198986.2 MIRLET7A3 chr22 46112732 46112840 + miRNA KNOWN NA 109 109 1 ENSG00000264147.1 MIR4763 chr22 46113566 46113657 + miRNA KNOWN NA 92 92 1 ENSG00000207875.1 MIRLET7B chr22 46113686 46113768 + miRNA KNOWN NA 83 83 1 ENSG00000186951.15 PPARA chr22 46150521 46243756 + protein_coding KNOWN OTTHUMG00000150443.5 93236 13219 53 ENSG00000234207.1 AC096570.2 chr2 22377594 22482004 + lincRNA NOVEL OTTHUMG00000151815.1 104411 569 4 ENSG00000280384.1 RP4-695O20.1 chr22 46163303 46165347 + sense_intronic NOVEL OTTHUMG00000189191.1 2045 2045 1 ENSG00000205643.9 CDPF1 chr22 46244011 46250679 - protein_coding KNOWN OTTHUMG00000030672.4 6669 2005 21 ENSG00000130943.6 PKDREJ chr22 46255663 46263355 - protein_coding KNOWN OTTHUMG00000150493.1 7693 7693 1 ENSG00000075234.15 TTC38 chr22 46267961 46294008 + protein_coding KNOWN OTTHUMG00000150494.1 26048 3578 44 ENSG00000277232.2 GTSE1-AS1 chr22 46295143 46296660 - lincRNA KNOWN OTTHUMG00000189497.1 1518 1518 2 ENSG00000075218.17 GTSE1 chr22 46296741 46330810 + protein_coding KNOWN OTTHUMG00000150486.2 34070 4242 21 ENSG00000100416.11 TRMU chr22 46330875 46357340 + protein_coding KNOWN OTTHUMG00000150424.2 26466 8390 108 ENSG00000075275.15 CELSR1 chr22 46360834 46537170 - protein_coding KNOWN OTTHUMG00000150423.1 176337 12806 46 ENSG00000230634.1 RP5-996D20.3 chr22 46481329 46481760 - processed_pseudogene KNOWN OTTHUMG00000150422.1 432 432 1 ENSG00000234869.1 RP3-439F8.1 chr22 46541495 46548196 + antisense NOVEL OTTHUMG00000150405.1 6702 2949 2 ENSG00000233587.1 AC096570.1 chr2 22536479 22538288 + lincRNA NOVEL OTTHUMG00000151816.1 1810 440 3 ENSG00000075240.15 GRAMD4 chr22 46576012 46679790 + protein_coding KNOWN OTTHUMG00000150402.2 103779 4885 57 ENSG00000100422.12 CERK chr22 46684411 46738261 - protein_coding KNOWN OTTHUMG00000150395.2 53851 4938 31 ENSG00000260708.1 CTA-29F11.1 chr22 46761894 46762563 - antisense NOVEL OTTHUMG00000172744.1 670 670 1 ENSG00000054611.12 TBC1D22A chr22 46762617 47175699 + protein_coding KNOWN OTTHUMG00000150332.3 413083 5315 106 ENSG00000280080.1 U51561.1 chr22 46915328 46915908 - protein_coding KNOWN NA 581 581 1 ENSG00000278881.1 FP325331.1 chr22 47115838 47117217 - protein_coding KNOWN NA 1380 1380 1 ENSG00000280312.1 RP1-111J24.1 chr22 47259366 47261007 + TEC KNOWN OTTHUMG00000172746.1 1642 1642 1 ENSG00000224715.1 CITF22-49D8.1 chr22 47345569 47373541 + lincRNA NOVEL OTTHUMG00000150328.1 27973 4364 4 ENSG00000218357.3 LL22NC03-75H12.2 chr22 47461299 47487111 - lincRNA NOVEL OTTHUMG00000150324.3 25813 1090 5 ENSG00000205634.5 LINC00898 chr22 47621043 47631569 - lincRNA NOVEL OTTHUMG00000150323.2 10527 4314 12 ENSG00000222616.1 RN7SKP27 chr2 22861552 22861884 + misc_RNA KNOWN NA 333 333 1 ENSG00000224271.4 RP11-191L9.4 chr22 47631674 47855600 + lincRNA NOVEL OTTHUMG00000150321.1 223927 2276 16 ENSG00000232897.2 RP11-191L9.5 chr22 47662559 47663603 - processed_pseudogene KNOWN OTTHUMG00000150322.2 1045 740 2 ENSG00000230345.1 RP13-455A7.1 chr22 47860671 47862062 + lincRNA NOVEL OTTHUMG00000150319.1 1392 219 2 ENSG00000279712.1 CTA-280A3.2 chr22 47916728 47926264 + lincRNA NOVEL OTTHUMG00000189277.1 9537 9537 1 ENSG00000279888.1 CTA-280A3.1 chr22 47944306 47945146 + lincRNA NOVEL OTTHUMG00000189219.1 841 841 1 ENSG00000235154.1 CTA-280A3__B.2 chr22 48044710 48048549 - lincRNA NOVEL OTTHUMG00000150320.1 3840 372 2 ENSG00000278890.1 LL22NC03-27C5.1 chr22 48052646 48058275 + lincRNA NOVEL OTTHUMG00000189268.1 5630 5630 1 ENSG00000238192.1 LL22NC03-121E8.4 chr22 48139461 48141001 - lincRNA NOVEL OTTHUMG00000150317.1 1541 498 2 ENSG00000229275.1 LL22NC03-121E8.3 chr22 48141542 48143229 + lincRNA NOVEL OTTHUMG00000150318.1 1688 668 4 ENSG00000266508.1 MIR3201 chr22 48274364 48274415 + miRNA KNOWN NA 52 52 1 ENSG00000232451.1 AC016768.1 chr2 23018125 23199056 - lincRNA NOVEL OTTHUMG00000151813.2 180932 1536 14 ENSG00000233179.1 RP11-536P6.3 chr22 48448890 48451217 + lincRNA NOVEL OTTHUMG00000150310.1 2328 568 2 ENSG00000219438.7 FAM19A5 chr22 48489460 48850912 + protein_coding KNOWN OTTHUMG00000150308.1 361453 3173 18 ENSG00000281732.1 CTA-299D3.8 chr22 48538900 48547387 - processed_transcript NOVEL OTTHUMG00000150309.1 8488 3629 10 ENSG00000266887.1 MIR4535 chr22 48780295 48780353 + miRNA KNOWN NA 59 59 1 ENSG00000251912.1 AL954742.1 chr22 48814320 48814404 - miRNA NOVEL NA 85 85 1 ENSG00000205632.2 LINC01310 chr22 48892917 48898386 + lincRNA NOVEL OTTHUMG00000150307.1 5470 3426 4 ENSG00000226142.2 RPL35P8 chr22 49213911 49214247 - processed_pseudogene KNOWN OTTHUMG00000150301.2 337 337 1 ENSG00000280199.1 RP1-34P24.3 chr22 49264201 49266080 + lincRNA NOVEL OTTHUMG00000189187.1 1880 1880 1 ENSG00000188511.11 C22orf34 chr22 49414524 49657542 - lincRNA KNOWN OTTHUMG00000030424.4 243019 6769 30 ENSG00000280224.1 CTA-722E9.1 chr22 49500568 49501585 + lincRNA NOVEL OTTHUMG00000189188.1 1018 1018 1 ENSG00000279132.1 FAM231A chr1 16733951 16734461 - protein_coding NOVEL OTTHUMG00000189300.1 511 511 1 ENSG00000223530.1 AC012506.1 chr2 23330664 23332044 - lincRNA NOVEL OTTHUMG00000151898.1 1381 525 4 ENSG00000279597.1 RP4-566L20.1 chr22 49534062 49534926 + lincRNA NOVEL OTTHUMG00000189189.1 865 865 1 ENSG00000264139.1 MIR3667 chr22 49543393 49543466 - miRNA KNOWN NA 74 74 1 ENSG00000212939.2 RP1-29C18.10 chr22 49548681 49556473 + lincRNA NOVEL OTTHUMG00000150300.1 7793 3894 2 ENSG00000213279.2 RP1-29C18.9 chr22 49572264 49575426 - lincRNA NOVEL OTTHUMG00000150298.1 3163 2379 2 ENSG00000235111.1 RP1-29C18.8 chr22 49612657 49615716 - sense_intronic NOVEL OTTHUMG00000150299.1 3060 2975 2 ENSG00000226954.1 RP5-983L19.2 chr22 49718053 49724506 - lincRNA NOVEL OTTHUMG00000150297.1 6454 3775 2 ENSG00000223142.1 RN7SKP252 chr22 49738677 49739003 + misc_RNA KNOWN NA 327 327 1 ENSG00000214727.2 RPL5P35 chr22 49757627 49758980 - unprocessed_pseudogene KNOWN OTTHUMG00000150295.1 1354 816 3 ENSG00000100425.17 BRD1 chr22 49773283 49827512 - protein_coding KNOWN OTTHUMG00000150288.3 54230 5850 68 ENSG00000279345.1 RP3-522J7.7 chr22 49805452 49807208 + antisense NOVEL OTTHUMG00000189262.1 1757 1757 1 ENSG00000233714.1 AC012506.2 chr2 23347654 23351864 + lincRNA NOVEL OTTHUMG00000151900.1 4211 892 2 ENSG00000236867.1 RP3-522J7.5 chr22 49817248 49817712 + processed_pseudogene KNOWN OTTHUMG00000150296.1 465 465 1 ENSG00000260613.1 RP3-522J7.6 chr22 49832616 49837786 - lincRNA NOVEL OTTHUMG00000172739.1 5171 1567 2 ENSG00000229409.1 RP11-494O16.3 chr22 49845929 49846090 + processed_pseudogene KNOWN OTTHUMG00000150287.1 162 162 1 ENSG00000277771.1 Metazoa_SRP chr22 49846456 49846720 + misc_RNA NOVEL NA 265 265 1 ENSG00000279494.1 RP11-494O16.4 chr22 49851425 49853364 + lincRNA NOVEL OTTHUMG00000189190.1 1940 1940 1 ENSG00000100426.6 ZBED4 chr22 49853842 49890078 + protein_coding KNOWN OTTHUMG00000150291.2 36237 6893 2 ENSG00000280567.1 Metazoa_SRP chr22 49878999 49879242 + misc_RNA NOVEL NA 244 244 1 ENSG00000182858.12 ALG12 chr22 49900229 49918458 - protein_coding KNOWN OTTHUMG00000150289.3 18230 5350 20 ENSG00000273192.1 CITF22-1A6.3 chr22 49902228 49904576 + lincRNA NOVEL OTTHUMG00000186143.1 2349 2349 1 ENSG00000184164.13 CRELD2 chr22 49918167 49927540 + protein_coding KNOWN OTTHUMG00000150292.4 9374 5165 76 ENSG00000223634.1 AC012506.3 chr2 23357516 23360376 - lincRNA NOVEL OTTHUMG00000151905.1 2861 533 2 ENSG00000278869.1 CITF22-49E9.3 chr22 49933198 49934074 - lincRNA NOVEL OTTHUMG00000189148.1 877 877 1 ENSG00000198355.4 PIM3 chr22 49960513 49964080 + protein_coding KNOWN OTTHUMG00000150290.1 3568 2461 9 ENSG00000276753.1 MIR6821 chr22 49962866 49962939 + miRNA KNOWN NA 74 74 1 ENSG00000188263.9 IL17REL chr22 49994513 50012659 - protein_coding KNOWN OTTHUMG00000150242.1 18147 3696 28 ENSG00000138892.10 TTLL8 chr22 50015123 50056935 - protein_coding KNOWN OTTHUMG00000150241.6 41813 2707 31 ENSG00000100427.14 MLC1 chr22 50059391 50085902 - protein_coding KNOWN OTTHUMG00000150236.2 26512 4297 40 ENSG00000073146.14 MOV10L1 chr22 50089879 50161690 + protein_coding KNOWN OTTHUMG00000044648.4 71812 6872 138 ENSG00000280395.1 RP5-898I4.1 chr22 50092745 50096437 + sense_overlapping NOVEL OTTHUMG00000189186.1 3693 3693 1 ENSG00000073150.12 PANX2 chr22 50170731 50180294 + protein_coding KNOWN OTTHUMG00000044649.4 9564 3102 12 ENSG00000170638.8 TRABD chr22 50185915 50199598 + protein_coding KNOWN OTTHUMG00000044644.3 13684 3153 51 ENSG00000235497.4 AC012506.4 chr2 23375229 23381299 - lincRNA NOVEL OTTHUMG00000151891.1 6071 751 10 ENSG00000273188.1 RP3-402G11.25 chr22 50191724 50192402 - antisense NOVEL OTTHUMG00000186122.1 679 679 1 ENSG00000273253.2 RP3-402G11.26 chr22 50199090 50200837 - antisense NOVEL OTTHUMG00000186123.4 1748 1001 2 ENSG00000073169.12 SELO chr22 50200979 50217616 + protein_coding KNOWN OTTHUMG00000044645.3 16638 2363 27 ENSG00000272836.1 RP3-402G11.27 chr22 50205585 50206062 - antisense NOVEL OTTHUMG00000186124.1 478 478 1 ENSG00000273137.1 RP3-402G11.28 chr22 50208461 50209542 - antisense NOVEL OTTHUMG00000186125.1 1082 640 2 ENSG00000128159.10 TUBGCP6 chr22 50217689 50244992 - protein_coding KNOWN OTTHUMG00000030150.5 27304 7689 116 ENSG00000100429.16 HDAC10 chr22 50245183 50251405 - protein_coding KNOWN OTTHUMG00000044647.5 6223 4951 225 ENSG00000188130.12 MAPK12 chr22 50245450 50261825 - protein_coding KNOWN OTTHUMG00000030145.4 16376 9424 105 ENSG00000185386.13 MAPK11 chr22 50263713 50270767 - protein_coding KNOWN OTTHUMG00000150226.1 7055 2688 41 ENSG00000196576.13 PLXNB2 chr22 50274979 50307627 - protein_coding KNOWN OTTHUMG00000150219.7 32649 7257 189 ENSG00000119771.13 KLHL29 chr2 23385217 23708611 + protein_coding KNOWN OTTHUMG00000151899.3 323395 11071 33 ENSG00000279216.1 AL022328.1 chr22 50275674 50275921 + protein_coding KNOWN NA 248 168 2 ENSG00000205593.10 DENND6B chr22 50309030 50327060 - protein_coding KNOWN OTTHUMG00000150210.5 18031 5935 64 ENSG00000227484.1 XX-C283C717.1 chr22 50314631 50316008 + antisense NOVEL OTTHUMG00000150220.1 1378 531 2 ENSG00000279182.1 XX-C00717C00720L.1 chr22 50316035 50317025 + antisense NOVEL OTTHUMG00000189185.1 991 991 1 ENSG00000100239.14 PPP6R2 chr22 50343304 50445090 + protein_coding KNOWN OTTHUMG00000150199.4 101787 5349 153 ENSG00000242463.3 RN7SL500P chr22 50371210 50371496 + misc_RNA KNOWN NA 287 287 1 ENSG00000238604.1 Y_RNA chr22 50398820 50398920 + misc_RNA NOVEL NA 101 101 1 ENSG00000100241.19 SBF1 chr22 50445000 50475024 - protein_coding KNOWN OTTHUMG00000150204.3 30025 9441 113 ENSG00000128165.8 ADM2 chr22 50481556 50486440 + protein_coding KNOWN OTTHUMG00000150202.1 4885 4276 5 ENSG00000100253.11 MIOX chr22 50486784 50490648 + protein_coding KNOWN OTTHUMG00000150207.1 3865 1796 37 ENSG00000224361.1 AC011239.1 chr2 23507043 23524344 - antisense NOVEL OTTHUMG00000151895.1 17302 584 2 ENSG00000100258.16 LMF2 chr22 50502949 50507691 - protein_coding KNOWN OTTHUMG00000150206.2 4743 3054 47 ENSG00000025770.17 NCAPH2 chr22 50508216 50523472 + protein_coding KNOWN OTTHUMG00000150205.5 15257 3159 111 ENSG00000130489.11 SCO2 chr22 50523568 50526439 - protein_coding KNOWN OTTHUMG00000150251.1 2872 1361 12 ENSG00000272821.1 CTA-384D8.36 chr22 50523926 50524780 + antisense NOVEL OTTHUMG00000186256.1 855 855 1 ENSG00000025708.11 TYMP chr22 50525752 50530085 - protein_coding KNOWN OTTHUMG00000150249.1 4334 3349 77 ENSG00000177989.12 ODF3B chr22 50529710 50532580 - protein_coding KNOWN OTTHUMG00000150334.2 2871 2301 42 ENSG00000272666.1 CTA-384D8.35 chr22 50542305 50542906 - lincRNA NOVEL OTTHUMG00000186141.1 602 602 1 ENSG00000273272.1 CTA-384D8.34 chr22 50542650 50543011 + lincRNA NOVEL OTTHUMG00000186142.1 362 362 1 ENSG00000226738.1 CTA-384D8.31 chr22 50546415 50547652 + antisense NOVEL OTTHUMG00000155749.1 1238 157 2 ENSG00000130487.5 KLHDC7B chr22 50548033 50551023 + protein_coding KNOWN OTTHUMG00000150250.2 2991 2991 1 ENSG00000279526.1 AC011239.2 chr2 23616499 23617987 - TEC KNOWN OTTHUMG00000151890.1 1489 1489 1 ENSG00000217442.3 SYCE3 chr22 50551112 50562905 - protein_coding KNOWN OTTHUMG00000150273.2 11794 475 5 ENSG00000205560.11 CPT1B chr22 50568861 50578465 - protein_coding KNOWN OTTHUMG00000137390.11 9605 4102 123 ENSG00000254413.7 CHKB-CPT1B chr22 50568869 50582965 - protein_coding KNOWN OTTHUMG00000166282.1 14097 5022 56 ENSG00000100288.18 CHKB chr22 50578949 50601455 - protein_coding KNOWN OTTHUMG00000150275.5 22507 3021 83 ENSG00000205559.3 CHKB-AS1 chr22 50583026 50583877 + antisense NOVEL OTTHUMG00000150208.1 852 578 2 ENSG00000272940.1 CTA-384D8.33 chr22 50597152 50597599 + lincRNA NOVEL OTTHUMG00000186119.1 448 448 1 ENSG00000008735.13 MAPK8IP2 chr22 50600685 50613981 + protein_coding KNOWN OTTHUMG00000150181.7 13297 5901 22 ENSG00000100299.16 ARSA chr22 50622754 50628173 - protein_coding KNOWN OTTHUMG00000150180.3 5420 2932 50 ENSG00000212569.1 Y_RNA chr22 50669804 50669901 + misc_RNA NOVEL NA 98 98 1 ENSG00000251322.6 SHANK3 chr22 50674415 50733298 + processed_transcript KNOWN OTTHUMG00000150169.2 58884 7455 71 ENSG00000119778.13 ATAD2B chr2 23748664 23927114 - protein_coding KNOWN OTTHUMG00000151902.3 178451 10492 84 ENSG00000206841.1 RNU6-409P chr22 50691260 50691363 - snRNA KNOWN NA 104 104 1 ENSG00000225929.1 AC000036.4 chr22 50735825 50738139 - antisense NOVEL OTTHUMG00000150170.1 2315 2030 2 ENSG00000100312.9 ACR chr22 50738196 50745334 + protein_coding KNOWN OTTHUMG00000150155.3 7139 2059 14 ENSG00000254499.1 AC002056.5 chr22 50740593 50743520 - antisense NOVEL OTTHUMG00000166231.1 2928 284 2 ENSG00000213683.4 AC002056.3 chr22 50754675 50755434 - processed_pseudogene KNOWN OTTHUMG00000150159.1 760 760 1 ENSG00000184319.14 RPL23AP82 chr22 50756948 50801309 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000150154.3 44362 4250 26 ENSG00000079974.16 RABL2B chr22 50767501 50783663 - protein_coding KNOWN OTTHUMG00000150156.3 16163 5870 98 ENSG00000228572.5 LL0YNC03-29C1.1 chrX 253743 255091 + unprocessed_pseudogene KNOWN OTTHUMG00000046372.2 1349 259 2 ENSG00000182378.11 PLCXD1 chrX 276322 303356 + protein_coding KNOWN OTTHUMG00000022693.4 27035 6191 57 ENSG00000178605.11 GTPBP6 chrX 304529 318819 - protein_coding KNOWN OTTHUMG00000022694.3 14291 2964 14 ENSG00000224464.2 PGAM1P6 chr2 23872268 23873014 - processed_pseudogene KNOWN OTTHUMG00000151904.1 747 747 1 ENSG00000226179.4 LINC00685 chrX 320990 321851 + antisense KNOWN OTTHUMG00000021049.1 862 428 2 ENSG00000167393.15 PPP2R3B chrX 333963 386955 - protein_coding KNOWN OTTHUMG00000021052.2 52993 9015 56 ENSG00000281849.1 RP13-465B17.4 chrX 386980 405579 + antisense NOVEL OTTHUMG00000189992.1 18600 484 2 ENSG00000275287.3 Metazoa_SRP chrX 388100 388389 - misc_RNA NOVEL NA 290 290 1 ENSG00000280767.1 RP13-465B17.5 chrX 419157 421980 + lincRNA NOVEL OTTHUMG00000189993.1 2824 515 2 ENSG00000234958.4 FABP5P13 chrX 523775 524102 - processed_pseudogene KNOWN OTTHUMG00000021050.1 328 328 1 ENSG00000229232.4 KRT18P53 chrX 545236 545352 - processed_pseudogene KNOWN OTTHUMG00000021051.1 117 117 1 ENSG00000185960.11 SHOX chrX 624344 659411 + protein_coding KNOWN OTTHUMG00000021053.4 35068 4384 22 ENSG00000237531.4 RP11-309M23.1 chrX 990221 994365 + lincRNA NOVEL OTTHUMG00000021054.1 4145 588 2 ENSG00000225661.5 RPL14P5 chrX 1008503 1010101 - processed_pseudogene KNOWN OTTHUMG00000021055.1 1599 730 3 ENSG00000238111.1 AC066692.3 chr2 23900693 23901149 + processed_pseudogene KNOWN OTTHUMG00000151896.1 457 457 1 ENSG00000205755.9 CRLF2 chrX 1187549 1212750 - protein_coding KNOWN OTTHUMG00000067432.2 25202 2010 32 ENSG00000198223.13 CSF2RA chrX 1268800 1310381 + protein_coding KNOWN OTTHUMG00000012533.6 41582 3830 172 ENSG00000264510.4 BX649553.3 chrX 1291755 1291828 + miRNA NOVEL NA 74 74 1 ENSG00000264819.4 BX649553.4 chrX 1292094 1292167 + miRNA NOVEL NA 74 74 1 ENSG00000263980.4 BX649553.2 chrX 1293615 1293689 + miRNA NOVEL NA 75 75 1 ENSG00000265658.4 MIR3690 chrX 1293918 1293992 + miRNA KNOWN NA 75 75 1 ENSG00000263835.4 BX649553.1 chrX 1294132 1294206 + miRNA NOVEL NA 75 75 1 ENSG00000223274.4 RNA5SP498 chrX 1300256 1300375 - rRNA KNOWN NA 120 120 1 ENSG00000185291.9 IL3RA chrX 1336616 1382689 + protein_coding KNOWN OTTHUMG00000021059.3 46074 1710 27 ENSG00000169100.11 SLC25A6 chrX 1386152 1392724 - protein_coding KNOWN OTTHUMG00000021058.1 6573 2164 12 ENSG00000058453.15 CROCC chr1 16740273 16972979 + protein_coding KNOWN OTTHUMG00000002200.8 232707 8871 130 ENSG00000173960.11 UBXN2A chr2 23927285 24004909 + protein_coding KNOWN OTTHUMG00000125497.3 77625 6884 31 ENSG00000236871.5 LINC00106 chrX 1396427 1399402 + lincRNA KNOWN OTTHUMG00000021061.3 2976 592 5 ENSG00000236017.6 ASMTL-AS1 chrX 1401769 1414028 + antisense KNOWN OTTHUMG00000021056.3 12260 1335 15 ENSG00000169093.13 ASMTL chrX 1403139 1453762 - protein_coding KNOWN OTTHUMG00000021057.1 50624 3506 46 ENSG00000182162.8 P2RY8 chrX 1462572 1537107 - protein_coding KNOWN OTTHUMG00000021060.1 74536 4459 4 ENSG00000197976.9 AKAP17A chrX 1591593 1602514 + protein_coding KNOWN OTTHUMG00000021063.3 10922 4075 15 ENSG00000196433.10 ASMT chrX 1615001 1643081 + protein_coding KNOWN OTTHUMG00000021065.2 28081 1846 28 ENSG00000223511.4 RP13-297E16.4 chrX 1732584 1755985 + lincRNA NOVEL OTTHUMG00000021062.2 23402 747 5 ENSG00000234622.4 RP13-297E16.5 chrX 1767347 1768776 + lincRNA NOVEL OTTHUMG00000021064.1 1430 548 2 ENSG00000169084.11 DHRSX chrX 2219516 2502805 - protein_coding KNOWN OTTHUMG00000021068.3 283290 3620 34 ENSG00000223571.4 DHRSX-IT1 chrX 2334295 2336410 - sense_intronic NOVEL OTTHUMG00000067406.1 2116 651 2 ENSG00000234946.1 SDHCP3 chr2 23943846 23944351 + processed_pseudogene KNOWN OTTHUMG00000151897.1 506 506 1 ENSG00000214717.8 ZBED1 chrX 2486414 2500967 - protein_coding KNOWN OTTHUMG00000021069.5 14554 4755 10 ENSG00000277120.3 MIR6089 chrX 2609191 2609254 + miRNA KNOWN NA 64 64 1 ENSG00000223773.5 CD99P1 chrX 2609348 2657229 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000021071.4 47882 5921 36 ENSG00000230542.4 LINC00102 chrX 2612988 2615347 - lincRNA KNOWN OTTHUMG00000021072.1 2360 1340 2 ENSG00000002586.16 CD99 chrX 2691179 2741309 + protein_coding KNOWN OTTHUMG00000021073.6 50131 3284 94 ENSG00000124343.11 XG chrX 2752050 2815927 + protein_coding KNOWN OTTHUMG00000021075.2 63878 2774 34 ENSG00000056998.17 GYG2 chrX 2828788 2882818 + protein_coding KNOWN OTTHUMG00000021079.4 54031 3646 62 ENSG00000235483.1 GYG2-AS1 chrX 2852740 2853760 - antisense NOVEL OTTHUMG00000021074.1 1021 515 2 ENSG00000006756.14 ARSD chrX 2903970 2929351 - protein_coding KNOWN OTTHUMG00000021077.3 25382 7030 35 ENSG00000229851.1 ARSD-AS1 chrX 2904904 2906081 + antisense NOVEL OTTHUMG00000021076.1 1178 816 2 ENSG00000280793.1 AC066692.1 chr2 23996792 23996870 - miRNA NOVEL NA 79 79 1 ENSG00000157399.13 ARSE chrX 2934632 2968310 - protein_coding KNOWN OTTHUMG00000137358.1 33679 2878 45 ENSG00000205667.2 ARSH chrX 3006613 3033571 + protein_coding KNOWN OTTHUMG00000159612.1 26959 1875 9 ENSG00000062096.13 ARSF chrX 3041471 3112726 + protein_coding KNOWN OTTHUMG00000021081.1 71256 2204 22 ENSG00000239228.3 RN7SL578P chrX 3058220 3058502 - misc_RNA KNOWN NA 283 283 1 ENSG00000230249.1 RP13-824C8.2 chrX 3112900 3113596 - processed_pseudogene KNOWN OTTHUMG00000021080.1 697 386 2 ENSG00000278560.1 AC079172.1 chrX 3188166 3188251 + miRNA NOVEL NA 86 86 1 ENSG00000228459.3 LINC01546 chrX 3271820 3284653 + lincRNA KNOWN OTTHUMG00000021082.1 12834 674 3 ENSG00000101825.7 MXRA5 chrX 3308565 3346641 - protein_coding KNOWN OTTHUMG00000021083.2 38077 9793 7 ENSG00000213487.3 ASS1P4 chrX 3367149 3368382 + processed_pseudogene KNOWN OTTHUMG00000021084.1 1234 1234 1 ENSG00000212214.1 SNORA48 chrX 3532117 3532251 - snoRNA NOVEL NA 135 135 1 ENSG00000243847.3 RN7SL610P chr2 23996795 23997085 - misc_RNA KNOWN NA 291 291 1 ENSG00000207435.1 RNU6-114P chrX 3572857 3572961 + snRNA KNOWN NA 105 105 1 ENSG00000183943.5 PRKX chrX 3604370 3713608 - protein_coding KNOWN OTTHUMG00000021087.2 109239 6452 21 ENSG00000207332.1 RNU6-146P chrX 3607258 3607365 - snRNA KNOWN NA 108 108 1 ENSG00000207320.1 Y_RNA chrX 3641443 3641555 - misc_RNA NOVEL NA 113 113 1 ENSG00000236188.1 PRKX-AS1 chrX 3659487 3668192 + antisense NOVEL OTTHUMG00000021086.1 8706 516 3 ENSG00000182888.5 RP11-558O12.1 chrX 3717149 3717600 + processed_pseudogene KNOWN OTTHUMG00000021085.2 452 452 1 ENSG00000205664.9 RP11-706O15.1 chrX 3817528 3843857 - lincRNA NOVEL OTTHUMG00000067412.3 26330 3054 26 ENSG00000234449.2 RP11-706O15.3 chrX 3853010 3882317 - lincRNA NOVEL OTTHUMG00000067411.3 29308 4381 8 ENSG00000205663.5 RP11-706O15.5 chrX 3891438 3920746 - lincRNA NOVEL OTTHUMG00000067421.4 29309 3700 7 ENSG00000205662.2 RP11-706O15.7 chrX 3929869 3937855 - lincRNA NOVEL OTTHUMG00000067420.1 7987 2118 2 ENSG00000205639.8 MFSD2B chr2 24010081 24063321 + protein_coding KNOWN OTTHUMG00000090819.2 53241 4438 46 ENSG00000225722.1 RP11-706O15.8 chrX 3953056 3953561 + processed_pseudogene KNOWN OTTHUMG00000067424.1 506 474 2 ENSG00000264861.1 AC108683.1 chrX 4583422 4583500 - miRNA NOVEL NA 79 79 1 ENSG00000236513.1 RP11-707P20.1 chrX 4627200 4633572 - lincRNA NOVEL OTTHUMG00000021088.1 6373 1184 3 ENSG00000222834.1 AC074035.1 chrX 4718793 4718914 - miRNA NOVEL NA 122 122 1 ENSG00000235039.1 MTND6P12 chrX 5168918 5169439 - processed_pseudogene KNOWN OTTHUMG00000021089.1 522 522 1 ENSG00000226313.1 RP11-585K14.2 chrX 5169512 5170645 + processed_pseudogene KNOWN OTTHUMG00000021090.1 1134 1134 1 ENSG00000238193.1 RP11-555H23.1 chrX 5305714 5307128 - processed_pseudogene KNOWN OTTHUMG00000021091.1 1415 1415 1 ENSG00000201660.1 SNORA20 chrX 5410122 5410251 + snoRNA NOVEL NA 130 130 1 ENSG00000236120.5 RP11-733O18.1 chrX 5653421 5726305 - lincRNA NOVEL OTTHUMG00000021092.1 72885 976 7 ENSG00000146938.13 NLGN4X chrX 5840637 6228863 - protein_coding KNOWN OTTHUMG00000021093.1 388227 7441 38 ENSG00000163026.10 C2orf44 chr2 24029340 24049575 - protein_coding KNOWN OTTHUMG00000125498.3 20236 3847 9 ENSG00000252291.1 SNORA31 chrX 6061644 6061749 - snoRNA NOVEL NA 106 106 1 ENSG00000229818.1 RP11-459A10.3 chrX 6381155 6381309 - processed_pseudogene KNOWN OTTHUMG00000021096.1 155 155 1 ENSG00000225962.1 RP11-459A10.2 chrX 6381474 6381644 - processed_pseudogene KNOWN OTTHUMG00000021095.1 171 171 1 ENSG00000265284.1 MIR4770 chrX 6383906 6383963 - miRNA KNOWN NA 58 58 1 ENSG00000237730.1 RP11-459A10.1 chrX 6422092 6422701 - processed_pseudogene KNOWN OTTHUMG00000021094.1 610 610 1 ENSG00000274521.1 AC078991.1 chrX 6514643 6514742 - miRNA NOVEL NA 100 100 1 ENSG00000169059.11 VCX3A chrX 6533618 6535118 - protein_coding KNOWN OTTHUMG00000021097.1 1501 995 12 ENSG00000231217.1 RP11-1M18.1 chrX 6667865 6721544 - lincRNA NOVEL OTTHUMG00000021098.1 53680 517 3 ENSG00000237490.3 RP13-926M18.1 chrX 6989329 6989783 + processed_pseudogene KNOWN OTTHUMG00000021099.1 455 455 1 ENSG00000130021.12 HDHD1 chrX 7048920 7148190 - protein_coding KNOWN OTTHUMG00000021101.2 99271 3168 24 ENSG00000222940.1 RNU6-370P chr2 24045835 24045938 + snRNA KNOWN NA 104 104 1 ENSG00000228550.1 RP11-483M24.2 chrX 7113005 7113404 - processed_pseudogene KNOWN OTTHUMG00000021100.1 400 400 1 ENSG00000264268.1 MIR4767 chrX 7147860 7147937 + miRNA KNOWN NA 78 78 1 ENSG00000101846.6 STS chrX 7219456 7354810 + protein_coding KNOWN OTTHUMG00000021102.1 135355 6521 10 ENSG00000279682.1 RP11-791N19.1 chrX 7489659 7491199 + TEC KNOWN OTTHUMG00000175445.1 1541 1541 1 ENSG00000182583.11 VCX chrX 7842262 7844143 + protein_coding KNOWN OTTHUMG00000028608.1 1882 1055 12 ENSG00000274923.1 GS1-214D18.3 chrX 7896514 7896722 - unprocessed_pseudogene KNOWN OTTHUMG00000187998.1 209 209 1 ENSG00000006757.10 PNPLA4 chrX 7898247 7927739 - protein_coding KNOWN OTTHUMG00000021103.1 29493 3441 26 ENSG00000230394.1 RP11-692P14.1 chrX 8007378 8018160 + lincRNA NOVEL OTTHUMG00000021104.1 10783 177 2 ENSG00000207628.2 MIR651 chrX 8126960 8127068 + miRNA KNOWN NA 109 109 1 ENSG00000177504.10 VCX2 chrX 8169944 8171267 - protein_coding KNOWN OTTHUMG00000021105.2 1324 815 3 ENSG00000119782.12 FKBP1B chr2 24049701 24063681 + protein_coding KNOWN OTTHUMG00000151889.2 13981 1677 27 ENSG00000205642.8 VCX3B chrX 8464830 8466510 + protein_coding KNOWN OTTHUMG00000021106.1 1681 1175 16 ENSG00000011201.9 KAL1 chrX 8528874 8732187 - protein_coding KNOWN OTTHUMG00000021107.1 203314 7132 36 ENSG00000225574.1 DRAXINP1 chrX 8783514 8784461 - processed_pseudogene KNOWN OTTHUMG00000021108.2 948 948 1 ENSG00000183304.9 FAM9A chrX 8790795 8801383 - protein_coding KNOWN OTTHUMG00000021110.1 10589 1590 20 ENSG00000231619.1 GS1-542M4.3 chrX 8856665 8857059 - processed_pseudogene KNOWN OTTHUMG00000021109.1 395 395 1 ENSG00000229012.1 GS1-542M4.4 chrX 8863861 8867601 - lincRNA NOVEL OTTHUMG00000021111.1 3741 466 3 ENSG00000225271.1 RP11-66N5.2 chrX 8980425 8982505 - processed_pseudogene KNOWN OTTHUMG00000021112.1 2081 2081 1 ENSG00000177138.14 FAM9B chrX 9024232 9164639 - protein_coding KNOWN OTTHUMG00000021114.3 140408 6843 49 ENSG00000200852.1 RNA5SP499 chrX 9133828 9133946 + rRNA KNOWN NA 119 119 1 ENSG00000219870.2 RP11-430A19.2 chrX 9179385 9179606 + processed_pseudogene KNOWN OTTHUMG00000021113.1 222 222 1 ENSG00000115128.6 SF3B6 chr2 24067584 24076443 - protein_coding NOVEL OTTHUMG00000125499.2 8860 1197 6 ENSG00000228543.1 GS1-519E5.1 chrX 9249920 9275206 + lincRNA NOVEL OTTHUMG00000021115.1 25287 1715 2 ENSG00000232111.1 RP11-126O22.1 chrX 9402751 9414566 + processed_pseudogene KNOWN OTTHUMG00000021116.1 11816 11812 2 ENSG00000101849.14 TBL1X chrX 9463295 9719743 + protein_coding KNOWN OTTHUMG00000021117.2 256449 7009 95 ENSG00000101850.11 GPR143 chrX 9725346 9786297 - protein_coding KNOWN OTTHUMG00000021118.3 60952 2486 28 ENSG00000146950.11 SHROOM2 chrX 9786456 9949443 + protein_coding KNOWN OTTHUMG00000021121.1 162988 8191 25 ENSG00000215319.2 EIF5P1 chrX 9818239 9819469 - processed_pseudogene KNOWN OTTHUMG00000021119.1 1231 1231 1 ENSG00000230326.1 HMGN1P33 chrX 9865093 9865543 - processed_pseudogene KNOWN OTTHUMG00000021120.1 451 451 1 ENSG00000206844.1 Y_RNA chrX 9874601 9874701 - misc_RNA NOVEL NA 101 101 1 ENSG00000234469.4 AC002365.5 chrX 9967358 9968352 + protein_coding NOVEL OTTHUMG00000189259.1 995 995 1 ENSG00000047644.16 WWC3 chrX 10015562 10144478 + protein_coding KNOWN OTTHUMG00000021123.1 128917 7114 49 ENSG00000219626.7 FAM228B chr2 24076526 24169640 + protein_coding KNOWN OTTHUMG00000151901.3 93115 4916 58 ENSG00000225076.1 WWC3-AS1 chrX 10024842 10038654 - antisense NOVEL OTTHUMG00000021122.1 13813 578 2 ENSG00000202469.1 Y_RNA chrX 10061222 10061323 + misc_RNA NOVEL NA 102 102 1 ENSG00000073464.10 CLCN4 chrX 10156945 10237660 + protein_coding KNOWN OTTHUMG00000021125.1 80716 6789 42 ENSG00000222133.1 AC003666.1 chrX 10216598 10216699 - miRNA NOVEL NA 102 102 1 ENSG00000227042.1 RP6-1O2.1 chrX 10242339 10365323 + lincRNA NOVEL OTTHUMG00000021126.1 122985 611 5 ENSG00000101871.13 MID1 chrX 10445310 10833654 - protein_coding KNOWN OTTHUMG00000021127.2 388345 9295 95 ENSG00000207202.1 RNU6-800P chrX 10582817 10582919 + snRNA KNOWN NA 103 103 1 ENSG00000234129.6 RP11-120D5.1 chrX 10847877 11111141 - lincRNA NOVEL OTTHUMG00000021129.3 263265 3080 17 ENSG00000004961.13 HCCS chrX 11111301 11123078 + protein_coding KNOWN OTTHUMG00000021128.1 11778 2335 21 ENSG00000207151.1 Y_RNA chrX 11116092 11116193 - misc_RNA NOVEL NA 102 102 1 ENSG00000207389.1 RNU1-4 chr1 16740516 16740679 + snRNA KNOWN NA 164 164 1 ENSG00000115129.12 TP53I3 chr2 24077433 24085861 - protein_coding KNOWN OTTHUMG00000090817.2 8429 2312 24 ENSG00000047648.20 ARHGAP6 chrX 11137543 11665701 - protein_coding KNOWN OTTHUMG00000021134.5 528159 7885 94 ENSG00000278218.1 uc_338 chrX 11148584 11148769 - misc_RNA NOVEL NA 186 186 1 ENSG00000275194.1 RP1-27C22.1 chrX 11221348 11225731 + unprocessed_pseudogene KNOWN OTTHUMG00000188001.1 4384 330 4 ENSG00000125363.13 AMELX chrX 11293413 11300761 + protein_coding KNOWN OTTHUMG00000021130.1 7349 835 18 ENSG00000263652.1 MIR548AX chrX 11318614 11318686 - miRNA KNOWN NA 73 73 1 ENSG00000232392.1 AC002366.3 chrX 11334233 11335901 - processed_pseudogene KNOWN OTTHUMG00000021131.1 1669 1190 2 ENSG00000274077.1 AC002366.1 chrX 11465953 11466138 + miRNA NOVEL NA 186 186 1 ENSG00000223418.1 GS1-590J6.2 chrX 11704123 11705590 - processed_pseudogene KNOWN OTTHUMG00000021133.1 1468 1468 1 ENSG00000005302.16 MSL3 chrX 11758159 11775753 + protein_coding KNOWN OTTHUMG00000021132.5 17595 6496 125 ENSG00000206792.1 Y_RNA chrX 12054824 12054926 - misc_RNA NOVEL NA 103 103 1 ENSG00000176732.6 PFN4 chr2 24115371 24123477 - protein_coding KNOWN OTTHUMG00000090816.2 8107 1056 12 ENSG00000169933.11 FRMPD4 chrX 12138466 12724523 + protein_coding KNOWN OTTHUMG00000021138.1 586058 8478 34 ENSG00000252111.1 AC002981.1 chrX 12148318 12148401 - miRNA NOVEL NA 84 84 1 ENSG00000206795.1 Y_RNA chrX 12149126 12149238 + misc_RNA NOVEL NA 113 113 1 ENSG00000223487.1 FRMPD4-AS1 chrX 12373167 12375133 - antisense NOVEL OTTHUMG00000021135.1 1967 285 2 ENSG00000231211.2 RPL17P49 chrX 12395757 12396167 - processed_pseudogene KNOWN OTTHUMG00000021136.1 411 411 1 ENSG00000273800.1 RP11-1J4.1 chrX 12583415 12583526 - unprocessed_pseudogene KNOWN OTTHUMG00000188002.1 112 112 1 ENSG00000271814.1 7SK chrX 12614003 12614197 - misc_RNA NOVEL NA 195 195 1 ENSG00000101911.11 PRPS2 chrX 12791355 12824222 + protein_coding KNOWN OTTHUMG00000021139.2 32868 2758 27 ENSG00000229083.1 PSMA6P2 chrX 12825840 12826833 + processed_pseudogene KNOWN OTTHUMG00000021140.1 994 686 2 ENSG00000230691.1 MRPL35P4 chrX 12844865 12845430 - processed_pseudogene KNOWN OTTHUMG00000021141.1 566 566 1 ENSG00000276087.1 RP11-507M3.1 chr2 24124366 24190436 + protein_coding NOVEL OTTHUMG00000178849.3 66071 2281 14 ENSG00000196664.4 TLR7 chrX 12867083 12890380 + protein_coding KNOWN OTTHUMG00000021137.1 23298 5209 5 ENSG00000233338.1 TLR8-AS1 chrX 12902817 12908333 - antisense NOVEL OTTHUMG00000021142.1 5517 1349 3 ENSG00000101916.11 TLR8 chrX 12906620 12923169 + protein_coding KNOWN OTTHUMG00000021145.3 16550 4353 5 ENSG00000205542.9 TMSB4X chrX 12975108 12977227 + protein_coding KNOWN OTTHUMG00000021144.2 2120 1705 11 ENSG00000187268.10 FAM9C chrX 13035618 13044682 - protein_coding KNOWN OTTHUMG00000021143.3 9065 5858 33 ENSG00000261030.1 RP11-791M20.1 chrX 13093660 13094573 + lincRNA NOVEL OTTHUMG00000175492.1 914 914 1 ENSG00000235385.1 GS1-600G8.5 chrX 13266048 13303452 - lincRNA NOVEL OTTHUMG00000021149.2 37405 1557 5 ENSG00000231216.1 GS1-600G8.3 chrX 13310652 13319933 + antisense NOVEL OTTHUMG00000021147.1 9282 2249 17 ENSG00000123594.4 ATXN3L chrX 13318236 13319952 - protein_coding KNOWN OTTHUMG00000021146.2 1717 1717 4 ENSG00000235592.1 GS1-600G8.4 chrX 13327937 13329867 + unprocessed_pseudogene KNOWN OTTHUMG00000021148.1 1931 739 6 ENSG00000232642.1 AC008073.7 chr2 24165884 24175005 - antisense NOVEL OTTHUMG00000151892.1 9122 1190 6 ENSG00000226985.4 LINC01203 chrX 13335241 13373634 + lincRNA NOVEL OTTHUMG00000021151.1 38394 922 11 ENSG00000226434.1 RP11-1L9.1 chrX 13377188 13403019 + lincRNA NOVEL OTTHUMG00000021152.1 25832 586 4 ENSG00000197582.5 GPX1P1 chrX 13378735 13379340 - processed_pseudogene KNOWN OTTHUMG00000021150.1 606 606 1 ENSG00000198759.10 EGFL6 chrX 13569605 13633575 + protein_coding KNOWN OTTHUMG00000021155.1 63971 2607 27 ENSG00000233357.2 RPL30P15 chrX 13574746 13575066 + processed_pseudogene KNOWN OTTHUMG00000021153.2 321 321 1 ENSG00000199622.1 RN7SKP20 chrX 13596236 13596548 + misc_RNA KNOWN NA 313 313 1 ENSG00000176896.8 TCEANC chrX 13653189 13681964 + protein_coding KNOWN OTTHUMG00000021154.3 28776 5231 14 ENSG00000123595.6 RAB9A chrX 13689121 13710506 + protein_coding KNOWN OTTHUMG00000021156.1 21386 2043 7 ENSG00000196459.12 TRAPPC2 chrX 13712244 13734635 - protein_coding KNOWN OTTHUMG00000021157.5 22392 6107 35 ENSG00000046651.13 OFD1 chrX 13734745 13769353 + protein_coding KNOWN OTTHUMG00000021159.1 34609 5172 132 ENSG00000186453.11 FAM228A chr2 24175069 24200849 + protein_coding KNOWN OTTHUMG00000151903.1 25781 2265 22 ENSG00000046653.13 GPM6B chrX 13771031 13938638 - protein_coding KNOWN OTTHUMG00000021162.3 167608 5675 68 ENSG00000233535.1 RP1-122K4.2 chrX 13955393 13963904 + lincRNA NOVEL OTTHUMG00000021161.1 8512 696 2 ENSG00000212663.2 RP1-122K4.3 chrX 13980066 13988820 - lincRNA NOVEL OTTHUMG00000021163.1 8755 544 2 ENSG00000046647.12 GEMIN8 chrX 14008279 14029893 - protein_coding KNOWN OTTHUMG00000021160.1 21615 2424 20 ENSG00000233247.3 GS1-257G1.1 chrX 14244382 14244928 + processed_pseudogene KNOWN OTTHUMG00000021164.1 547 547 1 ENSG00000101958.12 GLRA2 chrX 14529298 14731812 + protein_coding KNOWN OTTHUMG00000021166.2 202515 3713 35 ENSG00000221278.1 AC003658.1 chrX 14764975 14765117 - miRNA NOVEL NA 143 143 1 ENSG00000231066.3 NPM1P9 chrX 14834476 14835319 - processed_pseudogene KNOWN OTTHUMG00000021167.3 844 844 1 ENSG00000181544.12 FANCB chrX 14843407 14873069 - protein_coding KNOWN OTTHUMG00000021168.3 29663 3215 31 ENSG00000130150.10 MOSPD2 chrX 14873441 14922327 + protein_coding KNOWN OTTHUMG00000021170.2 48887 5656 54 ENSG00000223754.1 AC008073.9 chr2 24199839 24201698 - antisense NOVEL OTTHUMG00000151894.1 1860 543 2 ENSG00000235929.1 TPT1P14 chrX 14977959 14978463 - processed_pseudogene KNOWN OTTHUMG00000021169.1 505 505 1 ENSG00000236929.2 RP11-699A7.1 chrX 15117437 15117768 - processed_pseudogene KNOWN OTTHUMG00000021171.2 332 332 1 ENSG00000102048.14 ASB9 chrX 15235288 15270467 - protein_coding KNOWN OTTHUMG00000021172.2 35180 2363 56 ENSG00000165192.12 ASB11 chrX 15281697 15315656 - protein_coding KNOWN OTTHUMG00000021173.3 33960 3140 29 ENSG00000165195.12 PIGA chrX 15319451 15335554 - protein_coding KNOWN OTTHUMG00000021174.1 16104 3746 24 ENSG00000165197.4 FIGF chrX 15345591 15384376 - protein_coding KNOWN OTTHUMG00000021175.1 38786 2153 9 ENSG00000087842.9 PIR chrX 15384799 15493564 - protein_coding KNOWN OTTHUMG00000021176.1 108766 2512 36 ENSG00000102010.13 BMX chrX 15464246 15556529 + protein_coding KNOWN OTTHUMG00000021180.1 92284 2806 69 ENSG00000130234.9 ACE2 chrX 15561033 15602148 - protein_coding KNOWN OTTHUMG00000021177.1 41116 3926 47 ENSG00000225833.1 GS1-594A7.3 chrX 15602881 15621484 + antisense NOVEL OTTHUMG00000021178.1 18604 574 2 ENSG00000198399.13 ITSN2 chr2 24202864 24360714 - protein_coding KNOWN OTTHUMG00000090818.6 157851 12022 201 ENSG00000147003.5 TMEM27 chrX 15627318 15665031 - protein_coding KNOWN OTTHUMG00000021181.1 37714 1578 6 ENSG00000237539.1 GS1-594A7.5 chrX 15646167 15646875 - processed_pseudogene KNOWN OTTHUMG00000021179.1 709 611 2 ENSG00000186312.9 CA5BP1 chrX 15674932 15703724 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000021182.3 28793 2409 26 ENSG00000169239.11 CA5B chrX 15688830 15788409 + protein_coding KNOWN OTTHUMG00000021183.4 99580 8520 40 ENSG00000279413.1 AC112497.1 chrX 15702602 15703243 - pseudogene NOVEL NA 642 639 2 ENSG00000200620.1 SNORA7 chrX 15716208 15716346 + snoRNA NOVEL NA 139 139 1 ENSG00000281119.1 AC112497.2 chrX 15716262 15716364 + miRNA NOVEL NA 103 103 1 ENSG00000281371.1 INE2 chrX 15785716 15787589 - antisense KNOWN OTTHUMG00000189580.1 1874 1874 1 ENSG00000169249.11 ZRSR2 chrX 15790472 15823260 + protein_coding KNOWN OTTHUMG00000021184.2 32789 2077 19 ENSG00000182287.12 AP1S2 chrX 15825806 15855014 - protein_coding KNOWN OTTHUMG00000021186.1 29209 5454 28 ENSG00000242628.4 AC009228.1 chr2 24214381 24221516 + antisense NOVEL OTTHUMG00000151893.1 7136 627 7 ENSG00000200566.1 RNU5F-7P chrX 15916189 15916303 - snRNA KNOWN NA 115 115 1 ENSG00000226536.1 SETP15 chrX 15917548 15918631 + processed_pseudogene KNOWN OTTHUMG00000021185.1 1084 337 2 ENSG00000126010.5 GRPR chrX 16123556 16153021 + protein_coding KNOWN OTTHUMG00000021189.1 29466 1929 3 ENSG00000238178.5 RP11-431J24.2 chrX 16152941 16170869 - antisense NOVEL OTTHUMG00000021187.3 17929 1219 14 ENSG00000182798.9 MAGEB17 chrX 16167481 16171464 + protein_coding KNOWN OTTHUMG00000021188.6 3984 1611 5 ENSG00000215313.3 RPL6P30 chrX 16198428 16199289 - processed_pseudogene KNOWN OTTHUMG00000021190.1 862 862 1 ENSG00000252648.1 AC078993.1 chrX 16298390 16298474 + miRNA NOVEL NA 85 85 1 ENSG00000235071.1 RP11-759L5.2 chrX 16474342 16475340 - processed_pseudogene KNOWN OTTHUMG00000021191.1 999 999 1 ENSG00000239333.3 RN7SL658P chrX 16539137 16539439 - misc_RNA KNOWN NA 303 303 1 ENSG00000047230.13 CTPS2 chrX 16588003 16712936 - protein_coding KNOWN OTTHUMG00000021193.1 124934 5510 64 ENSG00000251805.1 SCARNA21 chr2 24273614 24273741 - scaRNA NOVEL NA 128 128 1 ENSG00000265144.1 MIR548AM chrX 16627012 16627085 - miRNA KNOWN NA 74 74 1 ENSG00000169906.5 S100G chrX 16650158 16654670 + protein_coding KNOWN OTTHUMG00000021194.1 4513 455 3 ENSG00000169895.5 SYAP1 chrX 16719632 16765336 + protein_coding KNOWN OTTHUMG00000021192.1 45705 6418 12 ENSG00000238709.1 RNU7-56P chrX 16767844 16767905 + snRNA KNOWN NA 62 62 1 ENSG00000086712.11 TXLNG chrX 16786427 16844519 + protein_coding KNOWN OTTHUMG00000021196.1 58093 4460 20 ENSG00000230180.1 CTD-2542O7.2 chrX 16803233 16803353 + processed_pseudogene KNOWN OTTHUMG00000021195.1 121 121 1 ENSG00000102054.16 RBBP7 chrX 16839283 16870414 - protein_coding KNOWN OTTHUMG00000021198.4 31132 7392 74 ENSG00000222736.1 RNU4-6P chrX 16875146 16875267 - snRNA KNOWN NA 122 122 1 ENSG00000223498.1 RP11-716A19.3 chrX 16897651 16898521 - processed_pseudogene KNOWN OTTHUMG00000021197.1 871 871 1 ENSG00000199410.1 Y_RNA chrX 16912215 16912317 - misc_RNA NOVEL NA 103 103 1 ENSG00000232963.1 HMGN2P20 chr2 24330402 24330674 + processed_pseudogene KNOWN OTTHUMG00000157047.1 273 273 1 ENSG00000169891.16 REPS2 chrX 16946691 17153280 + protein_coding KNOWN OTTHUMG00000021199.3 206590 11311 47 ENSG00000201467.1 SNORA16 chrX 17044380 17044511 - snoRNA NOVEL NA 132 132 1 ENSG00000214322.3 CBX1P2 chrX 17099782 17100239 - processed_pseudogene KNOWN OTTHUMG00000021200.1 458 458 1 ENSG00000214321.3 CBX1P4 chrX 17282637 17283093 + processed_pseudogene KNOWN OTTHUMG00000021201.1 457 457 1 ENSG00000238764.1 snoU13 chrX 17357930 17358033 + snoRNA NOVEL NA 104 104 1 ENSG00000188158.13 NHS chrX 17375420 17735994 + protein_coding KNOWN OTTHUMG00000022799.4 360575 10168 37 ENSG00000265465.1 MIR4768 chrX 17425881 17425954 + miRNA KNOWN NA 74 74 1 ENSG00000235834.1 RP1-60N8.1 chrX 17528435 17587160 + sense_intronic NOVEL OTTHUMG00000021202.1 58726 1554 2 ENSG00000230020.1 NHS-AS1 chrX 17552349 17557387 - antisense NOVEL OTTHUMG00000021203.1 5039 366 2 ENSG00000226153.1 RP3-389A20.5 chrX 17705339 17705691 - processed_pseudogene KNOWN OTTHUMG00000021204.1 353 353 1 ENSG00000227684.1 CROCCP4 chr1 16750233 16750964 + unprocessed_pseudogene KNOWN OTTHUMG00000057485.1 732 498 4 ENSG00000233747.1 RPL36AP13 chr2 24334512 24335152 + processed_pseudogene KNOWN OTTHUMG00000157046.1 641 317 2 ENSG00000047634.13 SCML1 chrX 17737449 17754988 + protein_coding KNOWN OTTHUMG00000021206.6 17540 5497 41 ENSG00000227873.1 RP3-389A20.2 chrX 17769005 17769398 - processed_pseudogene KNOWN OTTHUMG00000024017.1 394 394 1 ENSG00000131831.16 RAI2 chrX 17800049 17861337 - protein_coding KNOWN OTTHUMG00000021209.3 61289 2622 17 ENSG00000276467.1 RP1-272E8.2 chrX 17897711 17900333 - unprocessed_pseudogene KNOWN OTTHUMG00000188004.1 2623 2623 1 ENSG00000225066.1 RP1-272E8.1 chrX 17933349 17934823 + processed_pseudogene KNOWN OTTHUMG00000021208.1 1475 1475 1 ENSG00000225882.1 LINC01456 chrX 17970197 18104644 - lincRNA NOVEL OTTHUMG00000021210.1 134448 708 5 ENSG00000177324.12 BEND2 chrX 18162931 18220883 - protein_coding KNOWN OTTHUMG00000021211.1 57953 4637 25 ENSG00000102098.16 SCML2 chrX 18239314 18354727 - protein_coding KNOWN OTTHUMG00000021212.2 115414 4203 24 ENSG00000235211.4 TMSB10P2 chrX 18341216 18341346 + processed_pseudogene KNOWN OTTHUMG00000021213.2 131 131 1 ENSG00000207025.1 Y_RNA chrX 18395994 18396095 - misc_RNA NOVEL NA 102 102 1 ENSG00000084676.14 NCOA1 chr2 24491914 24770702 + protein_coding KNOWN OTTHUMG00000125523.6 278789 8633 149 ENSG00000008086.9 CDKL5 chrX 18425583 18653629 + protein_coding KNOWN OTTHUMG00000021214.5 228047 15642 92 ENSG00000236187.1 GJA6P chrX 18535079 18536120 + processed_pseudogene KNOWN OTTHUMG00000021215.1 1042 1042 1 ENSG00000102104.8 RS1 chrX 18639910 18672109 - protein_coding KNOWN OTTHUMG00000021216.1 32200 3485 11 ENSG00000086717.17 PPEF1 chrX 18675909 18827921 + protein_coding KNOWN OTTHUMG00000021219.8 152013 3513 81 ENSG00000237221.1 PPEF1-AS1 chrX 18688643 18691604 - antisense NOVEL OTTHUMG00000021217.1 2962 430 2 ENSG00000196564.4 RP3-499B10.3 chrX 18838709 18839452 - processed_pseudogene KNOWN OTTHUMG00000021218.1 744 744 1 ENSG00000223018.1 AL096700.1 chrX 18863564 18863708 - miRNA NOVEL NA 145 145 1 ENSG00000224224.1 HAUS1P2 chrX 18865771 18866554 + processed_pseudogene KNOWN OTTHUMG00000021221.1 784 784 1 ENSG00000237836.4 PHKA2-AS1 chrX 18890296 18894497 + antisense NOVEL OTTHUMG00000021220.1 4202 930 6 ENSG00000044446.10 PHKA2 chrX 18892300 18984598 - protein_coding KNOWN OTTHUMG00000021222.2 92299 9029 62 ENSG00000202430.1 RNA5SP88 chr2 24564630 24564738 - rRNA KNOWN NA 109 109 1 ENSG00000266710.2 RN7SL48P chrX 18915243 18915535 - misc_RNA KNOWN NA 293 293 1 ENSG00000173698.16 GPR64 chrX 18989309 19122637 - protein_coding KNOWN OTTHUMG00000021223.2 133329 10155 279 ENSG00000131828.12 PDHA1 chrX 19343893 19361705 + protein_coding KNOWN OTTHUMG00000021224.2 17813 4493 83 ENSG00000180815.13 MAP3K15 chrX 19360056 19515261 - protein_coding KNOWN OTTHUMG00000022724.4 155206 5592 120 ENSG00000202144.1 Y_RNA chrX 19376774 19376875 + misc_RNA NOVEL NA 102 102 1 ENSG00000275800.1 EIF5P2 chrX 19496378 19497721 - unprocessed_pseudogene KNOWN OTTHUMG00000188005.1 1344 1035 2 ENSG00000147010.16 SH3KBP1 chrX 19533975 19887601 - protein_coding KNOWN OTTHUMG00000021227.1 353627 5780 103 ENSG00000276515.1 AL732325.1 chrX 19868637 19868700 - miRNA NOVEL NA 64 64 1 ENSG00000173681.15 CXorf23 chrX 19912860 19970298 - protein_coding KNOWN OTTHUMG00000021226.5 57439 8630 52 ENSG00000206663.1 Y_RNA chrX 19985058 19985159 - misc_RNA NOVEL NA 102 102 1 ENSG00000206732.1 RNU6-936P chr2 24676309 24676415 + snRNA KNOWN NA 107 107 1 ENSG00000184368.14 MAP7D2 chrX 20006713 20116917 - protein_coding KNOWN OTTHUMG00000021228.3 110205 4376 67 ENSG00000264566.2 MIR23C chrX 20017081 20017191 - miRNA KNOWN NA 111 111 1 ENSG00000173674.9 EIF1AX chrX 20124518 20141844 - protein_coding KNOWN OTTHUMG00000022704.1 17327 4427 13 ENSG00000201882.1 snoU2-30 chrX 20136066 20136135 - snoRNA NOVEL NA 70 70 1 ENSG00000201592.1 snoU2_19 chrX 20136306 20136385 - snoRNA NOVEL NA 80 80 1 ENSG00000225037.1 EIF1AX-AS1 chrX 20139968 20140444 + antisense NOVEL OTTHUMG00000021229.1 477 378 2 ENSG00000177189.11 RPS6KA3 chrX 20149911 20267100 - protein_coding KNOWN OTTHUMG00000021231.4 117190 8837 55 ENSG00000281047.1 AL807772.1 chrX 20274433 20274577 + miRNA NOVEL NA 145 145 1 ENSG00000252978.1 RN7SKP183 chrX 20452108 20452431 + misc_RNA KNOWN NA 324 324 1 ENSG00000206716.1 RNU6-133P chrX 21214637 21214743 + snRNA KNOWN NA 107 107 1 ENSG00000184924.5 PTRHD1 chr2 24789734 24793382 - protein_coding KNOWN OTTHUMG00000151978.3 3649 1917 13 ENSG00000149970.13 CNKSR2 chrX 21374418 21654695 + protein_coding KNOWN OTTHUMG00000021233.1 280278 7160 96 ENSG00000231913.1 RARRES2P3 chrX 21421822 21422294 - processed_pseudogene KNOWN OTTHUMG00000021232.1 473 473 1 ENSG00000273787.1 AL928874.1 chrX 21563072 21563169 + miRNA NOVEL NA 98 98 1 ENSG00000185915.5 KLHL34 chrX 21654690 21658330 - protein_coding KNOWN OTTHUMG00000021234.1 3641 3641 1 ENSG00000091482.5 SMPX chrX 21705972 21758163 - protein_coding KNOWN OTTHUMG00000021235.1 52192 1040 11 ENSG00000012174.10 MBTPS2 chrX 21839636 21885424 + protein_coding KNOWN OTTHUMG00000021237.1 45789 8927 24 ENSG00000275681.1 LL0XNC01-138C3.2 chrX 21841794 21841961 - unprocessed_pseudogene KNOWN OTTHUMG00000188006.1 168 168 1 ENSG00000230797.2 YY2 chrX 21855987 21858727 + protein_coding KNOWN OTTHUMG00000021236.1 2741 2741 1 ENSG00000206639.1 Y_RNA chrX 21872707 21872808 + misc_RNA NOVEL NA 102 102 1 ENSG00000271286.1 LL0XNC01-39B3.1 chrX 21939461 21940160 + processed_pseudogene KNOWN OTTHUMG00000184989.1 700 700 1 ENSG00000138092.9 CENPO chr2 24793136 24822376 + protein_coding KNOWN OTTHUMG00000125525.3 29241 5518 50 ENSG00000102172.14 SMS chrX 21940573 21994835 + protein_coding KNOWN OTTHUMG00000021239.2 54263 2160 31 ENSG00000102174.8 PHEX chrX 22032441 22251310 + protein_coding KNOWN OTTHUMG00000021241.2 218870 6384 26 ENSG00000224204.1 PHEX-AS1 chrX 22162733 22172983 - antisense NOVEL OTTHUMG00000021240.1 10251 1906 5 ENSG00000277896.1 Y10196.1 chrX 22173493 22173587 + miRNA NOVEL NA 95 95 1 ENSG00000233067.2 PTCHD1-AS chrX 22259797 23293146 - lincRNA NOVEL OTTHUMG00000021249.2 1033350 1135 10 ENSG00000175809.4 ZNF645 chrX 22272943 22274457 + protein_coding KNOWN OTTHUMG00000021242.1 1515 1515 1 ENSG00000231846.1 RP11-494I9.2 chrX 22428132 22494713 + lincRNA NOVEL OTTHUMG00000021244.1 66582 389 3 ENSG00000224396.1 METTL15P3 chrX 22435598 22436818 + processed_pseudogene KNOWN OTTHUMG00000021243.1 1221 1221 1 ENSG00000201095.1 RNU6-266P chrX 22527835 22527941 + snRNA KNOWN NA 107 107 1 ENSG00000231011.1 RP11-494I9.1 chrX 22616744 22617143 - processed_pseudogene KNOWN OTTHUMG00000021245.1 400 400 1 ENSG00000138031.13 ADCY3 chr2 24819169 24919839 - protein_coding KNOWN OTTHUMG00000094765.5 100671 6058 109 ENSG00000265819.1 AC092832.1 chrX 22636992 22637077 + miRNA NOVEL NA 86 86 1 ENSG00000237019.1 GS1-433O24.1 chrX 22698457 22768966 + lincRNA NOVEL OTTHUMG00000021246.1 70510 382 2 ENSG00000277735.1 AC004470.1 chrX 22761306 22761390 - miRNA NOVEL NA 85 85 1 ENSG00000184735.6 DDX53 chrX 22999961 23003589 + protein_coding KNOWN OTTHUMG00000021248.1 3629 3629 1 ENSG00000174028.6 FAM3C2 chrX 23075758 23076767 + processed_pseudogene KNOWN OTTHUMG00000021247.1 1010 681 2 ENSG00000221786.1 AC004673.1 chrX 23120832 23120905 - miRNA NOVEL NA 74 74 1 ENSG00000228610.1 PDCL2P1 chrX 23198339 23198690 + processed_pseudogene KNOWN OTTHUMG00000021250.1 352 352 1 ENSG00000165186.10 PTCHD1 chrX 23334015 23404372 + protein_coding KNOWN OTTHUMG00000021251.2 70358 14895 8 ENSG00000226774.1 RP11-654E17.2 chrX 23351013 23351450 + processed_pseudogene KNOWN OTTHUMG00000021252.1 438 438 1 ENSG00000238623.2 AC096507.1 chrX 23553772 23553896 - miRNA NOVEL NA 125 125 1 ENSG00000271936.1 RP11-443B20.1 chr2 24825610 24826717 + antisense NOVEL OTTHUMG00000185752.1 1108 1108 1 ENSG00000123131.11 PRDX4 chrX 23664262 23686399 + protein_coding KNOWN OTTHUMG00000021253.3 22138 1904 25 ENSG00000123130.15 ACOT9 chrX 23702253 23766475 - protein_coding KNOWN OTTHUMG00000021257.4 64223 5046 90 ENSG00000263425.1 AC131011.1 chrX 23756172 23756281 + miRNA NOVEL NA 110 110 1 ENSG00000233785.1 RP13-314C10.5 chrX 23772992 23782956 - antisense NOVEL OTTHUMG00000021255.1 9965 672 3 ENSG00000202272.1 Y_RNA chrX 23782210 23782310 + misc_RNA NOVEL NA 101 101 1 ENSG00000130066.15 SAT1 chrX 23783173 23786226 + protein_coding KNOWN OTTHUMG00000021256.1 3054 2498 36 ENSG00000184831.12 APOO chrX 23833353 23907934 - protein_coding KNOWN OTTHUMG00000021259.3 74582 1146 27 ENSG00000238103.4 RPL9P7 chrX 23836742 23837321 - processed_pseudogene KNOWN OTTHUMG00000021254.3 580 580 1 ENSG00000165182.9 CXorf58 chrX 23907801 23939507 + protein_coding KNOWN OTTHUMG00000021258.1 31707 1925 13 ENSG00000174010.9 KLHL15 chrX 23983720 24027186 - protein_coding KNOWN OTTHUMG00000021261.1 43467 6272 4 ENSG00000115137.10 DNAJC27 chr2 24943636 24972094 - protein_coding KNOWN OTTHUMG00000125524.3 28459 5624 40 ENSG00000130741.9 EIF2S3 chrX 24054716 24077971 + protein_coding KNOWN OTTHUMG00000021262.2 23256 3472 24 ENSG00000201407.1 SNORA68 chrX 24133186 24133317 + snoRNA NOVEL NA 132 132 1 ENSG00000234230.1 ZFX-AS1 chrX 24146225 24149654 - antisense NOVEL OTTHUMG00000021263.1 3430 417 3 ENSG00000005889.14 ZFX chrX 24149173 24216255 + protein_coding KNOWN OTTHUMG00000021264.1 67083 9037 63 ENSG00000264184.1 AC096509.1 chrX 24286545 24286677 + miRNA NOVEL NA 133 133 1 ENSG00000223611.5 SUPT20HL2 chrX 24310907 24313315 - processed_pseudogene KNOWN OTTHUMG00000021265.1 2409 2409 1 ENSG00000264746.1 AC004552.1 chrX 24348809 24348906 + miRNA NOVEL NA 98 98 1 ENSG00000223731.2 SUPT20HL1 chrX 24362761 24365378 + processed_pseudogene KNOWN OTTHUMG00000021267.1 2618 2618 1 ENSG00000225071.1 GS1-184P14.2 chrX 24429573 24429920 - processed_pseudogene KNOWN OTTHUMG00000021266.1 348 348 1 ENSG00000067992.11 PDK3 chrX 24465221 24539837 + protein_coding KNOWN OTTHUMG00000021269.2 74617 2695 25 ENSG00000237953.1 AC013267.1 chr2 24968958 24969224 - processed_pseudogene KNOWN OTTHUMG00000151979.1 267 267 1 ENSG00000214124.3 SNRPEP9 chrX 24513450 24513687 + processed_pseudogene KNOWN OTTHUMG00000021268.1 238 238 1 ENSG00000281483.1 AC004656.1 chrX 24517240 24517340 - miRNA NOVEL NA 101 101 1 ENSG00000260822.1 GS1-358P8.4 chrX 24545516 24550466 + sense_overlapping NOVEL OTTHUMG00000175571.1 4951 4951 1 ENSG00000102230.12 PCYT1B chrX 24558087 24672677 - protein_coding KNOWN OTTHUMG00000021270.5 114591 5555 32 ENSG00000226222.3 RP11-753E22.3 chrX 24632257 24632601 + processed_pseudogene KNOWN OTTHUMG00000021272.3 345 345 1 ENSG00000236836.1 PCYT1B-AS1 chrX 24650073 24658237 + antisense NOVEL OTTHUMG00000021273.1 8165 275 2 ENSG00000236487.2 RP11-753E22.2 chrX 24681909 24682634 + processed_pseudogene KNOWN OTTHUMG00000021271.2 726 416 2 ENSG00000101868.9 POLA1 chrX 24693919 24996986 + protein_coding KNOWN OTTHUMG00000021277.2 303068 6336 127 ENSG00000264224.1 AC004655.1 chrX 24698122 24698191 + miRNA NOVEL NA 70 70 1 ENSG00000251869.1 SCARNA23 chrX 24744441 24744570 + scaRNA KNOWN NA 130 130 1 ENSG00000186715.9 MST1L chr1 16754910 16770237 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000002578.3 15328 5180 47 ENSG00000202479.1 SNORD14 chr2 24969388 24969477 - snoRNA NOVEL NA 90 90 1 ENSG00000232472.1 EEF1B2P3 chrX 24788392 24789069 - processed_pseudogene KNOWN OTTHUMG00000021274.1 678 678 1 ENSG00000004848.6 ARX chrX 25003694 25015948 - protein_coding KNOWN OTTHUMG00000021275.2 12255 2876 5 ENSG00000214111.3 RP1-258N20.3 chrX 25029545 25030235 + processed_pseudogene KNOWN OTTHUMG00000021276.2 691 691 1 ENSG00000240439.3 RN7SL91P chrX 25060649 25060939 - misc_RNA KNOWN NA 291 291 1 ENSG00000176812.7 RP11-629O4.1 chrX 25194381 25195207 - processed_pseudogene KNOWN OTTHUMG00000021278.1 827 827 1 ENSG00000212075.1 AC112778.1 chrX 25206370 25206460 - miRNA NOVEL NA 91 91 1 ENSG00000281895.1 AC112778.2 chrX 25229795 25229932 + miRNA NOVEL NA 138 138 1 ENSG00000229310.1 RPP40P1 chrX 25591353 25591808 - processed_pseudogene KNOWN OTTHUMG00000021279.1 456 456 1 ENSG00000228519.3 RP11-298C3.2 chrX 25645722 25646327 - processed_pseudogene KNOWN OTTHUMG00000021280.1 606 606 1 ENSG00000233403.1 RP11-86A5.1 chrX 25878339 25893544 + lincRNA NOVEL OTTHUMG00000021281.1 15206 550 4 ENSG00000224165.4 DNAJC27-AS1 chr2 24971390 25039694 + antisense NOVEL OTTHUMG00000151981.2 68305 5651 22 ENSG00000176774.5 MAGEB18 chrX 26138343 26140735 + protein_coding KNOWN OTTHUMG00000021282.1 2393 1811 3 ENSG00000232446.1 RP13-60P5.2 chrX 26147774 26148281 + unprocessed_pseudogene KNOWN OTTHUMG00000021283.1 508 508 1 ENSG00000232030.2 MAGEB6P1 chrX 26160601 26161896 + unprocessed_pseudogene KNOWN OTTHUMG00000021284.2 1296 1296 1 ENSG00000227511.1 GS1-466O4.2 chrX 26170052 26170913 + unprocessed_pseudogene KNOWN OTTHUMG00000021286.1 862 862 1 ENSG00000176746.6 MAGEB6 chrX 26192440 26195646 + protein_coding KNOWN OTTHUMG00000021285.1 3207 1949 2 ENSG00000232644.1 GS1-466O4.3 chrX 26200042 26200647 + unprocessed_pseudogene KNOWN OTTHUMG00000021287.1 606 606 1 ENSG00000188408.5 MAGEB5 chrX 26216169 26218270 + protein_coding KNOWN OTTHUMG00000021288.2 2102 1216 2 ENSG00000237171.1 GS1-466O4.5 chrX 26223903 26224658 + unprocessed_pseudogene KNOWN OTTHUMG00000021289.1 756 756 1 ENSG00000228464.1 RP11-617O8.1 chrX 26345236 26346242 + processed_pseudogene KNOWN OTTHUMG00000021290.1 1007 650 2 ENSG00000231388.1 RP11-702C7.2 chrX 26496936 26505603 + processed_pseudogene KNOWN OTTHUMG00000021292.1 8668 1624 2 ENSG00000207069.1 Y_RNA chr2 25008845 25008946 - misc_RNA NOVEL NA 102 102 1 ENSG00000230265.1 RP11-702C7.1 chrX 26557675 26558330 + processed_pseudogene KNOWN OTTHUMG00000021291.1 656 656 1 ENSG00000259849.1 VENTXP1 chrX 26558337 26561052 + lincRNA KNOWN OTTHUMG00000175433.1 2716 2716 1 ENSG00000236160.1 GS1-541M1.2 chrX 26657291 26657507 - processed_pseudogene KNOWN OTTHUMG00000021294.1 217 217 1 ENSG00000216938.3 RPL7P58 chrX 26686026 26687955 + processed_pseudogene KNOWN OTTHUMG00000021293.1 1930 758 2 ENSG00000236683.3 HMGA1P1 chrX 26748029 26749090 + processed_pseudogene KNOWN OTTHUMG00000021295.1 1062 1062 1 ENSG00000252491.1 RNU1-142P chrX 26790142 26790286 + snRNA KNOWN NA 145 145 1 ENSG00000242021.2 RP11-268G12.3 chrX 27042907 27176298 - lincRNA NOVEL OTTHUMG00000021297.2 133392 887 8 ENSG00000228933.6 RP11-268G12.1 chrX 27174920 27398997 - lincRNA NOVEL OTTHUMG00000021298.2 224078 2820 11 ENSG00000233807.1 RP11-268G12.2 chrX 27218131 27218678 - processed_pseudogene KNOWN OTTHUMG00000021296.1 548 548 1 ENSG00000274880.1 AC097262.1 chrX 27222282 27222367 + miRNA NOVEL NA 86 86 1 ENSG00000084710.12 EFR3B chr2 25042130 25159137 + protein_coding KNOWN OTTHUMG00000151988.6 117008 10591 103 ENSG00000252486.1 Y_RNA chrX 27252119 27252235 - misc_RNA NOVEL NA 117 117 1 ENSG00000235642.1 PTP4A1P5 chrX 27427777 27428231 - processed_pseudogene KNOWN OTTHUMG00000021299.1 455 455 1 ENSG00000224960.3 GS1-309P15.2 chrX 27460804 27463296 - processed_pseudogene KNOWN OTTHUMG00000021300.2 2493 2493 1 ENSG00000223391.2 GS1-309P15.3 chrX 27517771 27517881 - processed_pseudogene KNOWN OTTHUMG00000021301.2 111 111 1 ENSG00000238247.1 GS1-309P15.4 chrX 27517884 27519759 + processed_pseudogene KNOWN OTTHUMG00000021302.1 1876 1541 2 ENSG00000189186.9 DCAF8L2 chrX 27590382 27748821 + protein_coding KNOWN OTTHUMG00000021305.4 158440 4449 27 ENSG00000263522.2 AC107613.1 chrX 27743751 27743848 - miRNA NOVEL NA 98 98 1 ENSG00000177689.10 MAGEB10 chrX 27807990 27823014 + protein_coding KNOWN OTTHUMG00000046084.1 15025 1953 4 ENSG00000229731.1 RP11-501H19.2 chrX 27811885 27812902 + processed_pseudogene KNOWN OTTHUMG00000021303.1 1018 1018 1 ENSG00000226199.1 RP11-12D5.2 chrX 27832175 27833204 + processed_pseudogene KNOWN OTTHUMG00000021311.1 1030 1030 1 ENSG00000276653.1 Metazoa_SRP chr2 25058032 25058329 + misc_RNA NOVEL NA 298 298 1 ENSG00000232834.1 RP11-12D5.3 chrX 27847588 27847939 - processed_pseudogene KNOWN OTTHUMG00000021306.1 352 352 1 ENSG00000228345.2 RP11-12D5.4 chrX 27854323 27855353 + processed_pseudogene KNOWN OTTHUMG00000021307.1 1031 1031 1 ENSG00000233243.1 RP11-12D5.5 chrX 27863893 27864349 + processed_pseudogene KNOWN OTTHUMG00000021308.1 457 457 1 ENSG00000224589.1 RP11-12D5.6 chrX 27893348 27894059 - processed_pseudogene KNOWN OTTHUMG00000021309.1 712 712 1 ENSG00000226372.2 DCAF8L1 chrX 27977993 27981355 - protein_coding KNOWN OTTHUMG00000021312.2 3363 3363 1 ENSG00000263509.1 AC078988.1 chrX 28376963 28377061 - miRNA NOVEL NA 99 99 1 ENSG00000277569.1 MIR6134 chrX 28495555 28495663 - miRNA KNOWN NA 109 109 1 ENSG00000223742.1 RP11-149B9.2 chrX 28571532 28586395 - lincRNA NOVEL OTTHUMG00000021313.1 14864 756 3 ENSG00000169306.8 IL1RAPL1 chrX 28587399 29956723 + protein_coding KNOWN OTTHUMG00000021317.1 1369325 3668 16 ENSG00000226436.1 RP1-22N22.1 chrX 28659065 28659469 - processed_pseudogene KNOWN OTTHUMG00000021314.1 405 405 1 ENSG00000229593.1 SUCLA2P3 chr2 25079901 25081689 - processed_pseudogene KNOWN OTTHUMG00000151987.1 1789 1357 3 ENSG00000201666.1 SNORD74 chrX 28924069 28924138 + snoRNA NOVEL NA 70 70 1 ENSG00000237994.1 RP1-146A15.1 chrX 28942050 28942568 + sense_intronic NOVEL OTTHUMG00000021315.1 519 465 2 ENSG00000201356.1 RNA5SP500 chrX 28982852 28982970 - rRNA KNOWN NA 119 119 1 ENSG00000227393.1 RP6-127F18.2 chrX 29369001 29369845 - processed_pseudogene KNOWN OTTHUMG00000021316.1 845 845 1 ENSG00000264090.1 MIR4666B chrX 29574278 29574358 + miRNA KNOWN NA 81 81 1 ENSG00000227592.1 PIGFP3 chrX 30017160 30017881 - processed_pseudogene KNOWN OTTHUMG00000021318.1 722 722 1 ENSG00000270794.1 GS1-383H3.6 chrX 30209423 30210209 + processed_pseudogene KNOWN OTTHUMG00000184990.1 787 787 1 ENSG00000099399.5 MAGEB2 chrX 30215560 30220089 + protein_coding KNOWN OTTHUMG00000021319.1 4530 1610 2 ENSG00000198798.5 MAGEB3 chrX 30230436 30237492 + protein_coding KNOWN OTTHUMG00000021320.3 7057 2305 6 ENSG00000120289.11 MAGEB4 chrX 30242052 30244193 + protein_coding KNOWN OTTHUMG00000021321.1 2142 2142 1 ENSG00000115138.9 POMC chr2 25160853 25168903 - protein_coding KNOWN OTTHUMG00000094764.4 8051 1538 18 ENSG00000214107.6 MAGEB1 chrX 30243730 30252038 + protein_coding KNOWN OTTHUMG00000021322.1 8309 1969 9 ENSG00000276940.1 GS1-383H3.7 chrX 30290047 30290351 - unprocessed_pseudogene KNOWN OTTHUMG00000188010.1 305 305 1 ENSG00000169297.7 NR0B1 chrX 30304206 30309598 - protein_coding KNOWN OTTHUMG00000021323.1 5393 2203 4 ENSG00000266257.1 AC005926.1 chrX 30315085 30315178 - miRNA NOVEL NA 94 94 1 ENSG00000120280.5 CXorf21 chrX 30558824 30577844 - protein_coding KNOWN OTTHUMG00000021325.1 19021 1855 3 ENSG00000178556.8 CKS1BP6 chrX 30617454 30617693 + processed_pseudogene KNOWN OTTHUMG00000021326.2 240 240 1 ENSG00000232368.1 FTLP2 chrX 30630298 30630825 + processed_pseudogene KNOWN OTTHUMG00000021327.2 528 528 1 ENSG00000198814.11 GK chrX 30653359 30731456 + protein_coding KNOWN OTTHUMG00000021328.2 78098 5359 138 ENSG00000229331.1 GK-IT1 chrX 30671635 30672166 + sense_intronic NOVEL OTTHUMG00000021324.1 532 397 2 ENSG00000241886.1 RP11-242C19.2 chrX 30698207 30721932 + sense_intronic NOVEL OTTHUMG00000159435.1 23726 562 2 ENSG00000230452.1 LINC01381 chr2 25204313 25209202 + antisense NOVEL OTTHUMG00000152010.1 4890 466 2 ENSG00000243055.1 GK-AS1 chrX 30699998 30724174 - antisense NOVEL OTTHUMG00000159434.1 24177 651 2 ENSG00000277876.1 RP11-467P22.5 chrX 30821815 30823407 - unprocessed_pseudogene KNOWN OTTHUMG00000188011.2 1593 1211 2 ENSG00000157625.14 TAB3 chrX 30827442 30975084 - protein_coding KNOWN OTTHUMG00000021329.7 147643 12711 48 ENSG00000231542.1 TAB3-AS1 chrX 30834623 30835300 + antisense KNOWN OTTHUMG00000021331.2 678 245 2 ENSG00000235512.1 TAB3-AS2 chrX 30854321 30854707 + antisense NOVEL OTTHUMG00000021330.2 387 292 2 ENSG00000132446.6 FTHL17 chrX 31071241 31072053 - protein_coding KNOWN OTTHUMG00000021332.1 813 813 1 ENSG00000198947.13 DMD chrX 31097677 33339441 - protein_coding KNOWN OTTHUMG00000021336.5 2241765 18239 654 ENSG00000252903.2 RNU6-894P chrX 31348192 31348296 + snRNA KNOWN NA 105 105 1 ENSG00000222922.1 RNA5SP501 chrX 32102065 32102176 + rRNA KNOWN NA 112 112 1 ENSG00000236285.1 NPM1P8 chrX 32205902 32206738 + processed_pseudogene KNOWN OTTHUMG00000021333.1 837 837 1 ENSG00000119772.15 DNMT3A chr2 25227855 25342590 - protein_coding KNOWN OTTHUMG00000094777.6 114736 12020 156 ENSG00000263600.1 MIR3915 chrX 32583656 32583752 - miRNA KNOWN NA 97 97 1 ENSG00000221348.1 MIR548F5 chrX 32641474 32641559 - miRNA KNOWN NA 86 86 1 ENSG00000236828.1 DMD-AS3 chrX 32754940 32756400 + antisense NOVEL OTTHUMG00000021334.1 1461 293 2 ENSG00000226781.1 TBCAP1 chrX 33041395 33041721 + processed_pseudogene KNOWN OTTHUMG00000021335.1 327 327 1 ENSG00000215310.2 RP6-60B16.1 chrX 33410944 33412173 + processed_pseudogene KNOWN OTTHUMG00000021337.1 1230 1230 1 ENSG00000233928.4 RP11-305F18.1 chrX 33726508 33942280 + lincRNA NOVEL OTTHUMG00000021338.1 215773 512 6 ENSG00000185448.10 FAM47A chrX 34129756 34132314 - protein_coding KNOWN OTTHUMG00000021339.1 2559 2559 3 ENSG00000185638.9 FTH1P14 chrX 34147036 34147586 + processed_pseudogene KNOWN OTTHUMG00000021340.1 551 551 1 ENSG00000233571.1 RP11-545D19.1 chrX 34206725 34415537 - lincRNA NOVEL OTTHUMG00000021342.1 208813 526 3 ENSG00000236072.1 RP11-281B1.2 chrX 34387722 34388464 + processed_pseudogene KNOWN OTTHUMG00000021341.1 743 743 1 ENSG00000221445.2 MIR1301 chr2 25328633 25328744 - miRNA KNOWN NA 112 112 1 ENSG00000271136.1 RP11-320J16.1 chrX 34516920 34517358 + processed_pseudogene KNOWN OTTHUMG00000184993.1 439 439 1 ENSG00000147027.3 TMEM47 chrX 34627064 34657288 - protein_coding KNOWN OTTHUMG00000021343.1 30225 4054 3 ENSG00000225384.1 RP13-643D4.1 chrX 34717440 34717992 - processed_pseudogene KNOWN OTTHUMG00000021344.1 553 553 1 ENSG00000273704.1 RP11-573C10.1 chrX 34768327 34768688 - unprocessed_pseudogene KNOWN OTTHUMG00000188013.1 362 362 1 ENSG00000189132.6 FAM47B chrX 34942796 34944915 + protein_coding KNOWN OTTHUMG00000021345.1 2120 2120 1 ENSG00000222864.1 AL596268.1 chrX 35056331 35056458 - miRNA NOVEL NA 128 128 1 ENSG00000229347.1 RP11-504E21.1 chrX 35058927 35059974 + processed_pseudogene KNOWN OTTHUMG00000021346.1 1048 1048 1 ENSG00000252411.1 RNU6-1087P chrX 35594173 35594273 + snRNA KNOWN NA 101 101 1 ENSG00000230227.4 SIAH1P1 chrX 35626142 35627064 + processed_pseudogene KNOWN OTTHUMG00000021347.2 923 923 1 ENSG00000233663.1 RP11-497J7.1 chrX 35710911 35711942 + processed_pseudogene KNOWN OTTHUMG00000045352.1 1032 1032 1 ENSG00000223643.5 RP11-108M9.1 chr1 16851257 16853129 - lincRNA NOVEL OTTHUMG00000002201.3 1873 837 7 ENSG00000235072.2 AC012074.2 chr2 25369136 25375845 - lincRNA NOVEL OTTHUMG00000152130.2 6710 1809 3 ENSG00000271088.1 RP11-497J7.4 chrX 35741600 35744582 + processed_pseudogene KNOWN OTTHUMG00000184996.1 2983 2983 1 ENSG00000233880.1 RP11-497J7.2 chrX 35761499 35762479 + processed_pseudogene KNOWN OTTHUMG00000021349.2 981 981 1 ENSG00000189023.9 MAGEB16 chrX 35798342 35803735 + protein_coding KNOWN OTTHUMG00000021348.8 5394 1986 12 ENSG00000271519.1 RP11-307A17.2 chrX 35864858 35869631 + processed_pseudogene KNOWN OTTHUMG00000184997.1 4774 4774 1 ENSG00000165164.11 CXorf22 chrX 35919734 36385319 + protein_coding KNOWN OTTHUMG00000021351.4 465586 11254 141 ENSG00000206733.1 RNU6-641P chrX 36021939 36022045 - snRNA KNOWN NA 107 107 1 ENSG00000229384.2 HMGB1P16 chrX 36211096 36211635 + processed_pseudogene KNOWN OTTHUMG00000021352.1 540 540 1 ENSG00000226484.2 RP11-87M18.2 chrX 36365626 36440292 - antisense NOVEL OTTHUMG00000021356.2 74667 1861 8 ENSG00000233921.2 RPS15AP40 chrX 36374793 36375183 - processed_pseudogene KNOWN OTTHUMG00000021355.2 391 391 1 ENSG00000221729.1 AC233287.1 chrX 36577396 36577491 + miRNA NOVEL NA 96 96 1 ENSG00000138101.17 DTNB chr2 25377198 25673647 - protein_coding KNOWN OTTHUMG00000152129.6 296450 7146 284 ENSG00000249467.1 RP11-492O8.1 chrX 36719918 36720221 + processed_pseudogene KNOWN OTTHUMG00000021357.2 304 304 1 ENSG00000275314.1 RP11-32A1.2 chrX 36794500 36795460 - unprocessed_pseudogene KNOWN OTTHUMG00000188017.1 961 559 2 ENSG00000235510.1 BX842568.1 chrX 36957913 36958139 + unprocessed_pseudogene KNOWN OTTHUMG00000024023.1 227 227 1 ENSG00000223723.1 BX842568.2 chrX 36962196 36963425 - processed_pseudogene KNOWN OTTHUMG00000024024.1 1230 1230 1 ENSG00000231069.1 BX842568.4 chrX 36985523 36986093 - unprocessed_pseudogene KNOWN OTTHUMG00000024027.1 571 571 1 ENSG00000198173.4 FAM47C chrX 37008397 37011666 + protein_coding KNOWN OTTHUMG00000024025.1 3270 3270 1 ENSG00000243048.3 FTH1P18 chrX 37043023 37043571 - unprocessed_pseudogene KNOWN OTTHUMG00000033090.1 549 549 1 ENSG00000214071.4 RP11-31H15.2 chrX 37077851 37078401 - unprocessed_pseudogene KNOWN OTTHUMG00000033091.1 551 551 1 ENSG00000233810.1 MOB1AP2 chrX 37291168 37292227 + processed_pseudogene KNOWN OTTHUMG00000021358.2 1060 614 2 ENSG00000130962.16 PRRG1 chrX 37349275 37457295 + protein_coding KNOWN OTTHUMG00000021360.2 108021 6180 36 ENSG00000224220.1 AC104699.1 chr2 25421117 25427643 + antisense NOVEL OTTHUMG00000155125.1 6527 414 3 ENSG00000250349.3 RP5-972B16.2 chrX 37349330 38687674 + protein_coding PUTATIVE OTTHUMG00000161009.1 1338345 954 9 ENSG00000241607.1 RP11-357K9.2 chrX 37441523 37442068 + unprocessed_pseudogene KNOWN OTTHUMG00000021359.2 546 546 1 ENSG00000219186.2 FTH1P19 chrX 37492021 37492548 + unprocessed_pseudogene KNOWN OTTHUMG00000033179.2 528 528 1 ENSG00000234355.3 FTH1P27 chrX 37505310 37505860 + unprocessed_pseudogene KNOWN OTTHUMG00000033173.2 551 551 1 ENSG00000174678.9 FAM47DP chrX 37541077 37545262 - processed_pseudogene KNOWN OTTHUMG00000033174.1 4186 3290 2 ENSG00000147036.10 LANCL3 chrX 37571569 37684463 + protein_coding KNOWN OTTHUMG00000033177.2 112895 10298 16 ENSG00000047597.5 XK chrX 37685759 37732130 + protein_coding KNOWN OTTHUMG00000033171.1 46372 5206 3 ENSG00000165168.7 CYBB chrX 37780011 37813461 + protein_coding KNOWN OTTHUMG00000033175.1 33451 4423 17 ENSG00000165169.9 DYNLT3 chrX 37836757 37847637 - protein_coding KNOWN OTTHUMG00000033172.1 10881 3186 16 ENSG00000206983.1 RNU6-49P chrX 37870109 37870215 + snRNA KNOWN NA 107 107 1 ENSG00000201160.1 Y_RNA chr2 25697076 25697188 - misc_RNA NOVEL NA 113 113 1 ENSG00000259977.1 AL121578.2 chrX 37906147 37949405 + lincRNA NOVEL OTTHUMG00000033178.1 43259 710 3 ENSG00000224339.1 AL121578.5 chrX 37945884 37946775 + processed_pseudogene KNOWN OTTHUMG00000039781.2 892 892 1 ENSG00000187516.6 HYPM chrX 37990817 37991317 + protein_coding KNOWN OTTHUMG00000033180.1 501 501 1 ENSG00000229674.1 AL121578.7 chrX 37994344 37994790 + processed_pseudogene KNOWN OTTHUMG00000150277.1 447 447 1 ENSG00000147041.10 SYTL5 chrX 38006582 38128819 + protein_coding KNOWN OTTHUMG00000033176.1 122238 4791 34 ENSG00000221466.2 MIR548AJ2 chrX 38023895 38023986 - miRNA KNOWN NA 92 92 1 ENSG00000101955.13 SRPX chrX 38149336 38220924 - protein_coding KNOWN OTTHUMG00000021362.1 71589 1987 43 ENSG00000226679.1 RP13-43E11.1 chrX 38221391 38223667 + antisense NOVEL OTTHUMG00000021363.1 2277 655 2 ENSG00000156313.11 RPGR chrX 38269163 38327564 - protein_coding KNOWN OTTHUMG00000021361.5 58402 7143 104 ENSG00000252050.1 SNORA31 chrX 38308112 38308241 - snoRNA NOVEL NA 130 130 1 ENSG00000222070.1 AC010150.2 chr2 25722192 25722296 + miRNA NOVEL NA 105 105 1 ENSG00000036473.6 OTC chrX 38352545 38421450 + protein_coding KNOWN OTTHUMG00000022727.2 68906 1585 16 ENSG00000227988.1 TDGF1P1 chrX 38395369 38395895 - processed_pseudogene KNOWN OTTHUMG00000024089.1 527 527 1 ENSG00000232370.1 AF241726.2 chrX 38479215 38479913 + processed_pseudogene KNOWN OTTHUMG00000024086.1 699 699 1 ENSG00000229735.1 FTLP16 chrX 38484752 38485264 - processed_pseudogene KNOWN OTTHUMG00000024087.1 513 513 1 ENSG00000233007.1 UBTFL11 chrX 38531923 38534174 - processed_pseudogene KNOWN OTTHUMG00000024088.2 2252 2252 1 ENSG00000156298.11 TSPAN7 chrX 38561370 38688920 + protein_coding KNOWN OTTHUMG00000024090.4 127551 3110 56 ENSG00000238606.1 RNU7-7P chrX 38608215 38608276 + snRNA KNOWN NA 62 62 1 ENSG00000235806.1 RP4-646N3.1 chrX 38770331 38799658 + lincRNA NOVEL OTTHUMG00000024091.3 29328 1180 5 ENSG00000165175.14 MID1IP1 chrX 38801432 38806537 + protein_coding KNOWN OTTHUMG00000024092.2 5106 3790 10 ENSG00000238123.1 MID1IP1-AS1 chrX 38801568 38803883 - antisense NOVEL OTTHUMG00000024093.1 2316 376 2 ENSG00000143970.15 ASXL2 chr2 25733753 25878516 - protein_coding KNOWN OTTHUMG00000152176.3 144764 13023 40 ENSG00000207122.1 RNU6-591P chrX 39081180 39081285 - snRNA KNOWN NA 106 106 1 ENSG00000224610.1 RP11-265P11.1 chrX 39226103 39299786 - lincRNA NOVEL OTTHUMG00000024094.1 73684 828 3 ENSG00000235304.1 LINC01281 chrX 39304956 39327362 - lincRNA NOVEL OTTHUMG00000024095.2 22407 1773 6 ENSG00000236747.1 LINC01282 chrX 39367285 39391774 - lincRNA NOVEL OTTHUMG00000024096.2 24490 880 6 ENSG00000234191.1 RP11-157D23.2 chrX 39401252 39434824 - lincRNA NOVEL OTTHUMG00000024097.1 33573 786 4 ENSG00000263730.1 MIR3937 chrX 39661216 39661321 + miRNA KNOWN NA 106 106 1 ENSG00000281059.1 AF241734.1 chrX 39704368 39704431 - miRNA NOVEL NA 64 64 1 ENSG00000264618.2 RN7SL732P chrX 39786524 39786823 - misc_RNA KNOWN NA 300 300 1 ENSG00000228232.1 GAPDHP1 chrX 39787132 39788136 - processed_pseudogene KNOWN OTTHUMG00000024098.1 1005 1005 1 ENSG00000270759.1 CTD-2324A24.2 chrX 39791580 39791904 - processed_pseudogene KNOWN OTTHUMG00000184998.1 325 325 1 ENSG00000187536.4 TPM3P7 chr2 25809925 25810656 - processed_pseudogene KNOWN OTTHUMG00000152172.1 732 732 1 ENSG00000261435.1 RP13-126P21.2 chrX 39837536 39848358 - lincRNA NOVEL OTTHUMG00000175535.1 10823 1976 2 ENSG00000263972.1 MIR1587 chrX 39837561 39837613 + miRNA KNOWN NA 53 53 1 ENSG00000214047.4 RPS11P7 chrX 39865424 39865888 + processed_pseudogene KNOWN OTTHUMG00000021364.4 465 465 1 ENSG00000275790.1 AC092198.2 chrX 39981591 39981677 + miRNA NOVEL NA 87 87 1 ENSG00000223486.1 AC092198.1 chrX 40009276 40012182 + lincRNA NOVEL OTTHUMG00000024099.2 2907 2691 2 ENSG00000183337.15 BCOR chrX 40049815 40177329 - protein_coding KNOWN OTTHUMG00000024100.3 127515 8544 108 ENSG00000236393.1 RP11-320G24.1 chrX 40262917 40287720 + lincRNA NOVEL OTTHUMG00000033140.1 24804 3120 5 ENSG00000214045.3 RP6-186E3.1 chrX 40359183 40360726 - processed_pseudogene KNOWN OTTHUMG00000024101.1 1544 1544 1 ENSG00000206677.2 Y_RNA chrX 40492844 40492941 + misc_RNA NOVEL NA 98 98 1 ENSG00000235685.2 RP11-126D17.1 chrX 40514895 40515508 + processed_pseudogene KNOWN OTTHUMG00000024102.2 614 221 2 ENSG00000217643.1 PTGES3P2 chr2 25822469 25822950 + processed_pseudogene KNOWN OTTHUMG00000152177.1 482 482 1 ENSG00000238730.1 RNU7-164P chrX 40535502 40535563 - snRNA KNOWN NA 62 62 1 ENSG00000182220.12 ATP6AP2 chrX 40580908 40606637 + protein_coding KNOWN OTTHUMG00000024103.2 25730 2573 40 ENSG00000238205.2 MPC1L chrX 40623566 40623860 + processed_pseudogene KNOWN OTTHUMG00000024105.2 295 295 1 ENSG00000185753.11 CXorf38 chrX 40626921 40647554 - protein_coding KNOWN OTTHUMG00000024104.4 20634 6043 19 ENSG00000180182.9 MED14 chrX 40648306 40735858 - protein_coding KNOWN OTTHUMG00000024107.1 87553 9656 60 ENSG00000234636.2 MED14OS chrX 40735400 40738701 + antisense NOVEL OTTHUMG00000024106.2 3302 900 2 ENSG00000270791.1 DPRXP6 chrX 40758483 40759050 + processed_pseudogene KNOWN OTTHUMG00000185001.1 568 568 1 ENSG00000214031.2 RP11-169L17.3 chrX 40760104 40761270 - processed_pseudogene KNOWN OTTHUMG00000024108.1 1167 1167 1 ENSG00000237661.1 RP11-169L17.5 chrX 40831844 40832562 - processed_pseudogene KNOWN OTTHUMG00000024110.1 719 719 1 ENSG00000238222.3 MKRN4P chrX 40834485 40836005 + processed_pseudogene KNOWN OTTHUMG00000024109.4 1521 1521 1 ENSG00000218682.1 AC010150.1 chr2 25856461 25856966 - processed_pseudogene KNOWN OTTHUMG00000152174.1 506 506 1 ENSG00000232801.1 SDCBPP3 chrX 40890647 40891537 - processed_pseudogene KNOWN OTTHUMG00000024113.1 891 891 1 ENSG00000189145.7 RP11-77G22.2 chrX 40907987 40908391 + processed_pseudogene KNOWN OTTHUMG00000024111.2 405 405 1 ENSG00000216866.5 RPS2P55 chrX 40934982 40935864 - processed_pseudogene KNOWN OTTHUMG00000024112.2 883 883 1 ENSG00000237931.1 CLIC4P3 chrX 41076999 41077750 + processed_pseudogene KNOWN OTTHUMG00000021365.1 752 752 1 ENSG00000124486.11 USP9X chrX 41085635 41236579 + protein_coding KNOWN OTTHUMG00000021367.4 150945 13962 105 ENSG00000269941.1 RP5-1172N10.4 chrX 41233633 41234283 + sense_intronic NOVEL OTTHUMG00000184143.1 651 651 1 ENSG00000223714.1 RP5-1172N10.2 chrX 41275739 41276778 + lincRNA NOVEL OTTHUMG00000021366.1 1040 835 2 ENSG00000199564.1 RNA5SP502 chrX 41292798 41292916 + rRNA KNOWN NA 119 119 1 ENSG00000238426.1 Y_RNA chrX 41316488 41316589 + misc_RNA NOVEL NA 102 102 1 ENSG00000226641.1 RP13-13A3.1 chrX 41322601 41323111 - processed_pseudogene KNOWN OTTHUMG00000021368.1 511 511 1 ENSG00000217718.1 AC064847.4 chr2 25886964 25887206 - processed_pseudogene KNOWN OTTHUMG00000152175.2 243 243 1 ENSG00000215301.8 DDX3X chrX 41333348 41364472 + protein_coding KNOWN OTTHUMG00000021369.12 31125 8881 237 ENSG00000264573.2 RN7SL15P chrX 41345576 41345876 - misc_RNA KNOWN NA 301 301 1 ENSG00000188937.5 NYX chrX 41447434 41475710 + protein_coding KNOWN OTTHUMG00000021370.1 28277 2988 7 ENSG00000225238.1 RP1-169I5.4 chrX 41472264 41472653 - processed_pseudogene KNOWN OTTHUMG00000021371.1 390 390 1 ENSG00000147044.19 CASK chrX 41514934 41923463 - protein_coding KNOWN OTTHUMG00000021378.3 408530 10529 195 ENSG00000233033.1 CASK-AS1 chrX 41520036 41522336 + antisense NOVEL OTTHUMG00000021372.1 2301 515 2 ENSG00000212207.1 RNU6-1321P chrX 41570923 41571029 - snRNA KNOWN NA 107 107 1 ENSG00000217624.2 RP11-204C16.4 chrX 41675760 41676494 - processed_pseudogene KNOWN OTTHUMG00000021374.1 735 735 1 ENSG00000242559.3 RN7SL144P chrX 41683168 41683462 - misc_RNA KNOWN NA 295 295 1 ENSG00000171659.12 GPR34 chrX 41688973 41697277 + protein_coding KNOWN OTTHUMG00000021375.2 8305 1928 10 ENSG00000230239.1 RP11-108M9.2 chr1 16855407 16859284 + lincRNA NOVEL OTTHUMG00000002202.1 3878 882 3 ENSG00000084731.12 KIF3C chr2 25926596 25982749 - protein_coding KNOWN OTTHUMG00000094797.4 56154 6403 56 ENSG00000171657.5 GPR82 chrX 41724155 41730135 + protein_coding KNOWN OTTHUMG00000021373.1 5981 3349 5 ENSG00000229822.2 RP5-1174J21.2 chrX 41748222 41748608 + processed_pseudogene KNOWN OTTHUMG00000021376.2 387 387 1 ENSG00000237875.1 RP5-1174J21.1 chrX 41790192 41790250 - processed_pseudogene KNOWN OTTHUMG00000039817.1 59 59 1 ENSG00000251807.1 RNU6-202P chrX 41919254 41919349 - snRNA KNOWN NA 96 96 1 ENSG00000233103.1 RP11-524P6.1 chrX 42047883 42054836 - lincRNA NOVEL OTTHUMG00000021379.1 6954 478 2 ENSG00000228847.1 ATP5G2P4 chrX 42098754 42099173 - processed_pseudogene KNOWN OTTHUMG00000021381.1 420 420 1 ENSG00000212560.1 RNU6-630P chrX 42139425 42139530 - snRNA KNOWN NA 106 106 1 ENSG00000228780.2 RP1-50A13.1 chrX 42150511 42150744 - processed_pseudogene KNOWN OTTHUMG00000021380.2 234 234 1 ENSG00000206896.1 RNU6-1124P chrX 42174279 42174385 - snRNA KNOWN NA 107 107 1 ENSG00000231772.4 RP1-154K9.2 chrX 42252459 42699385 + lincRNA NOVEL OTTHUMG00000021383.1 446927 1308 12 ENSG00000237629.1 UQCRHP2 chr2 25994794 25995081 + processed_pseudogene KNOWN OTTHUMG00000151934.1 288 288 1 ENSG00000279849.1 FKSG70 chrX 42285229 42285603 + protein_coding KNOWN NA 375 375 1 ENSG00000102055.5 PPP1R2P9 chrX 42777471 42778079 - processed_pseudogene KNOWN OTTHUMG00000021382.4 609 609 1 ENSG00000270280.1 RP11-265D20.1 chrX 43000174 43000396 + processed_pseudogene KNOWN OTTHUMG00000185004.1 223 223 1 ENSG00000224294.1 RP3-326I13.1 chrX 43176994 43226598 + lincRNA NOVEL OTTHUMG00000021384.1 49605 2228 6 ENSG00000237206.1 IMPDH1P4 chrX 43278125 43279658 - processed_pseudogene KNOWN OTTHUMG00000021385.1 1534 1534 1 ENSG00000231750.3 NANOGP10 chrX 43407665 43408559 - processed_pseudogene KNOWN OTTHUMG00000021386.2 895 895 1 ENSG00000189221.8 MAOA chrX 43654907 43746824 + protein_coding KNOWN OTTHUMG00000021387.1 91918 5528 42 ENSG00000069535.13 MAOB chrX 43766611 43882447 - protein_coding KNOWN OTTHUMG00000021388.4 115837 2891 25 ENSG00000124479.8 NDP chrX 43948776 43973504 - protein_coding KNOWN OTTHUMG00000021391.1 24729 1833 6 ENSG00000236276.1 NDP-AS1 chrX 43949732 43969620 + antisense NOVEL OTTHUMG00000021390.1 19889 737 5 ENSG00000268412.2 TRMT112P6 chr2 26028208 26028612 - processed_pseudogene KNOWN OTTHUMG00000187085.1 405 372 2 ENSG00000214019.2 RP6-218J18.2 chrX 44029332 44030921 + processed_pseudogene KNOWN OTTHUMG00000021389.1 1590 1590 1 ENSG00000183690.12 EFHC2 chrX 44147882 44343672 - protein_coding KNOWN OTTHUMG00000021393.2 195791 3319 20 ENSG00000198414.5 TATDN2P1 chrX 44283916 44286246 + processed_pseudogene KNOWN OTTHUMG00000021392.1 2331 2331 1 ENSG00000214018.3 RRM2P3 chrX 44309314 44310476 - processed_pseudogene KNOWN OTTHUMG00000021394.1 1163 1163 1 ENSG00000200702.1 Y_RNA chrX 44401603 44401704 + misc_RNA NOVEL NA 102 102 1 ENSG00000224054.1 RP4-551E13.2 chrX 44466691 44468955 + processed_pseudogene KNOWN OTTHUMG00000021396.1 2265 1569 4 ENSG00000215035.2 FDPSP5 chrX 44476027 44477422 - processed_pseudogene KNOWN OTTHUMG00000021395.1 1396 1057 2 ENSG00000069509.5 FUNDC1 chrX 44523639 44543001 - protein_coding KNOWN OTTHUMG00000021399.1 19363 1399 9 ENSG00000252120.1 AL136137.1 chrX 44577354 44577438 - miRNA NOVEL NA 85 85 1 ENSG00000233543.1 CHTF8P1 chrX 44633692 44635232 + processed_pseudogene KNOWN OTTHUMG00000021397.3 1541 1541 1 ENSG00000084733.9 RAB10 chr2 26034107 26137454 + protein_coding KNOWN OTTHUMG00000094796.3 103348 3631 23 ENSG00000229168.4 RPL19P20 chrX 44649129 44649719 + processed_pseudogene KNOWN OTTHUMG00000021398.2 591 591 1 ENSG00000214016.3 RP6-105D16.1 chrX 44741087 44741964 + processed_pseudogene KNOWN OTTHUMG00000021400.1 878 878 1 ENSG00000242065.3 RN7SL291P chrX 44772773 44773061 - misc_RNA KNOWN NA 289 289 1 ENSG00000189037.7 DUSP21 chrX 44844004 44844888 + protein_coding KNOWN OTTHUMG00000021401.1 885 885 1 ENSG00000147050.13 KDM6A chrX 44873177 45112602 + protein_coding KNOWN OTTHUMG00000021402.1 239426 7139 221 ENSG00000281786.1 AL138744.1 chrX 44982494 44982556 + miRNA NOVEL NA 63 63 1 ENSG00000147113.15 CXorf36 chrX 45148374 45200901 - protein_coding KNOWN OTTHUMG00000021403.2 52528 6720 13 ENSG00000229491.4 RP11-342D14.1 chrX 45183251 45333917 + antisense NOVEL OTTHUMG00000021404.1 150667 1725 14 ENSG00000237782.3 RP1-192P9.1 chrX 45381527 45381995 - processed_pseudogene KNOWN OTTHUMG00000021405.1 469 469 1 ENSG00000229563.5 LINC01204 chrX 45505388 45630202 + lincRNA NOVEL OTTHUMG00000021406.2 124815 5260 12 ENSG00000199872.1 RNU6-942P chr2 26042675 26042781 + snRNA KNOWN NA 107 107 1 ENSG00000214282.3 KRT8P14 chrX 45632292 45633733 - processed_pseudogene KNOWN OTTHUMG00000021407.2 1442 1442 1 ENSG00000204915.3 RP6-99M1.1 chrX 45730752 45731688 + processed_pseudogene KNOWN OTTHUMG00000021408.1 937 937 1 ENSG00000270069.1 MIR222HG chrX 45745211 45770274 - lincRNA NOVEL OTTHUMG00000184015.3 25064 2785 4 ENSG00000207870.1 MIR221 chrX 45746157 45746266 - miRNA KNOWN NA 110 110 1 ENSG00000207725.2 MIR222 chrX 45747015 45747126 - miRNA KNOWN NA 112 112 1 ENSG00000269902.1 RP6-99M1.3 chrX 45764772 45765299 - lincRNA NOVEL OTTHUMG00000184078.1 528 528 1 ENSG00000231566.1 RP5-1158E12.3 chrX 45848074 45851490 - lincRNA NOVEL OTTHUMG00000021411.1 3417 375 3 ENSG00000212347.2 SNORD77 chrX 45892912 45892979 - snoRNA NOVEL NA 68 68 1 ENSG00000215286.3 RP5-1158E12.2 chrX 45913118 45913871 + processed_pseudogene KNOWN OTTHUMG00000021410.1 754 754 1 ENSG00000234613.1 RP5-1158E12.1 chrX 45913267 45917040 - lincRNA NOVEL OTTHUMG00000021409.1 3774 767 2 ENSG00000235440.1 RP11-214J9.1 chr2 26101317 26102136 - processed_pseudogene KNOWN OTTHUMG00000157048.1 820 820 1 ENSG00000224701.1 MED28P4 chrX 45951762 45952333 - processed_pseudogene KNOWN OTTHUMG00000021412.1 572 572 1 ENSG00000213100.2 KRT18P68 chrX 45983365 45984364 + processed_pseudogene KNOWN OTTHUMG00000021413.1 1000 1000 1 ENSG00000214009.2 PCNAP3 chrX 46058751 46059528 - processed_pseudogene KNOWN OTTHUMG00000021414.1 778 778 1 ENSG00000278838.1 Metazoa_SRP chrX 46073651 46073935 - misc_RNA NOVEL NA 285 285 1 ENSG00000229145.1 ACTBP1 chrX 46288016 46289128 - processed_pseudogene KNOWN OTTHUMG00000021415.1 1113 1113 1 ENSG00000236751.1 LINC01186 chrX 46325924 46327645 - lincRNA NOVEL OTTHUMG00000021416.1 1722 626 2 ENSG00000231235.1 RP11-75A9.1 chrX 46418450 46420079 - processed_pseudogene KNOWN OTTHUMG00000021417.1 1630 1630 1 ENSG00000235587.2 GAPDHP65 chrX 46439709 46440714 - processed_pseudogene KNOWN OTTHUMG00000021418.2 1006 1006 1 ENSG00000147121.14 KRBOX4 chrX 46446857 46497422 + protein_coding KNOWN OTTHUMG00000021421.2 50566 4120 38 ENSG00000224072.1 RP11-75A9.3 chrX 46454097 46457199 - processed_pseudogene KNOWN OTTHUMG00000021419.1 3103 2299 4 ENSG00000231655.1 AC011742.3 chr2 26140263 26141264 - processed_pseudogene KNOWN OTTHUMG00000151932.1 1002 352 2 ENSG00000251192.6 ZNF674 chrX 46497727 46545457 - protein_coding KNOWN OTTHUMG00000021420.2 47731 6203 33 ENSG00000199226.1 RNU6-50P chrX 46517766 46517868 + snRNA KNOWN NA 103 103 1 ENSG00000230844.2 ZNF674-AS1 chrX 46545493 46548408 + lincRNA NOVEL OTTHUMG00000021424.2 2916 2078 5 ENSG00000277721.1 Metazoa_SRP chrX 46553522 46553775 - misc_RNA NOVEL NA 254 254 1 ENSG00000270499.1 MKI67P1 chrX 46560928 46562749 - processed_pseudogene KNOWN OTTHUMG00000185006.1 1822 1460 2 ENSG00000147119.3 CHST7 chrX 46573784 46598408 + protein_coding KNOWN OTTHUMG00000021423.1 24625 2289 2 ENSG00000065923.8 SLC9A7 chrX 46599252 46759172 - protein_coding KNOWN OTTHUMG00000021428.1 159921 10033 47 ENSG00000213997.3 PGAM1P7 chrX 46646594 46647330 - processed_pseudogene KNOWN OTTHUMG00000039871.1 737 737 1 ENSG00000226048.1 YBX1P8 chrX 46684765 46685707 - processed_pseudogene KNOWN OTTHUMG00000021425.1 943 943 1 ENSG00000215284.2 RP11-198M15.1 chrX 46725164 46725818 - processed_pseudogene KNOWN OTTHUMG00000021426.1 655 655 1 ENSG00000214465.3 SMARCE1P6 chr2 26149204 26150731 + processed_pseudogene KNOWN OTTHUMG00000151936.2 1528 1216 2 ENSG00000102218.5 RP2 chrX 46836940 46882358 + protein_coding KNOWN OTTHUMG00000021430.1 45419 3803 5 ENSG00000204904.6 LINC01545 chrX 46887417 46899703 - lincRNA KNOWN OTTHUMG00000021429.1 12287 532 7 ENSG00000102221.12 JADE3 chrX 46912276 47061242 + protein_coding KNOWN OTTHUMG00000021431.4 148967 5137 33 ENSG00000130988.11 RGN chrX 47078355 47093314 + protein_coding KNOWN OTTHUMG00000021435.1 14960 2811 35 ENSG00000206685.1 RNU6-1189P chrX 47087506 47087612 + snRNA KNOWN NA 107 107 1 ENSG00000201659.1 RNU12-2P chrX 47132671 47132826 + snRNA KNOWN NA 156 156 1 ENSG00000147123.10 NDUFB11 chrX 47142216 47145504 - protein_coding KNOWN OTTHUMG00000021433.1 3289 1418 6 ENSG00000182872.14 RBM10 chrX 47144869 47186813 + protein_coding KNOWN OTTHUMG00000021432.2 41945 3889 106 ENSG00000237351.1 CTD-2522E6.4 chrX 47156638 47158199 - processed_pseudogene KNOWN OTTHUMG00000021434.1 1562 1248 2 ENSG00000130985.15 UBA1 chrX 47190861 47215128 + protein_coding KNOWN OTTHUMG00000021436.3 24268 6437 103 ENSG00000227133.1 AC011742.5 chr2 26160023 26161136 + processed_pseudogene KNOWN OTTHUMG00000151933.1 1114 434 3 ENSG00000224975.1 INE1 chrX 47204921 47205865 + sense_intronic KNOWN OTTHUMG00000046428.1 945 945 1 ENSG00000102225.14 CDK16 chrX 47217860 47229997 + protein_coding KNOWN OTTHUMG00000021438.2 12138 6524 176 ENSG00000102226.8 USP11 chrX 47232690 47248328 + protein_coding KNOWN OTTHUMG00000021437.4 15639 5269 102 ENSG00000237623.1 RP11-571E6.1 chrX 47273366 47274390 - processed_pseudogene KNOWN OTTHUMG00000021441.2 1025 635 2 ENSG00000266158.2 RN7SL785P chrX 47280811 47281063 - misc_RNA KNOWN NA 253 253 1 ENSG00000203402.2 RP11-571E6.3 chrX 47297852 47298721 + lincRNA NOVEL OTTHUMG00000021439.1 870 477 2 ENSG00000147117.7 ZNF157 chrX 47370583 47414305 + protein_coding KNOWN OTTHUMG00000021443.1 43723 2318 4 ENSG00000221459.1 SNORA11C chrX 47388649 47388777 + snoRNA KNOWN NA 129 129 1 ENSG00000232009.1 RP11-571E6.4 chrX 47389961 47392300 - processed_pseudogene KNOWN OTTHUMG00000021440.1 2340 1005 3 ENSG00000226556.2 NPM1P49 chrX 47438736 47439774 - processed_pseudogene KNOWN OTTHUMG00000021442.1 1039 714 2 ENSG00000237951.1 PPIL1P1 chr2 26162056 26162554 + processed_pseudogene KNOWN OTTHUMG00000151937.1 499 499 1 ENSG00000147124.11 ZNF41 chrX 47445879 47482946 - protein_coding KNOWN OTTHUMG00000021448.1 37068 4784 18 ENSG00000277605.1 Metazoa_SRP chrX 47476822 47477152 - misc_RNA NOVEL NA 331 331 1 ENSG00000196741.5 LINC01560 chrX 47483571 47484823 + lincRNA KNOWN OTTHUMG00000021445.1 1253 1253 2 ENSG00000235636.1 NUS1P1 chrX 47512602 47513483 - processed_pseudogene KNOWN OTTHUMG00000021444.1 882 882 1 ENSG00000078061.11 ARAF chrX 47561100 47571920 + protein_coding KNOWN OTTHUMG00000021446.2 10821 3535 48 ENSG00000008056.11 SYN1 chrX 47571898 47619853 - protein_coding KNOWN OTTHUMG00000021454.2 47956 3209 26 ENSG00000280539.1 Z84466.1 chrX 47577263 47577346 - miRNA NOVEL NA 84 84 1 ENSG00000102265.10 TIMP1 chrX 47582313 47586789 + protein_coding KNOWN OTTHUMG00000021447.1 4477 1541 21 ENSG00000263858.1 MIR4769 chrX 47587429 47587505 + miRNA KNOWN NA 77 77 1 ENSG00000126759.11 CFP chrX 47624213 47630305 - protein_coding KNOWN OTTHUMG00000021451.3 6093 4576 47 ENSG00000237491.7 RP11-206L10.9 chr1 778770 810060 + lincRNA NOVEL OTTHUMG00000002404.7 31291 5517 61 ENSG00000263811.1 MIR3675 chr1 16858949 16859021 - miRNA KNOWN NA 73 73 1 ENSG00000157833.11 GAREML chr2 26173091 26189663 + protein_coding KNOWN OTTHUMG00000151935.2 16573 5939 14 ENSG00000126767.16 ELK1 chrX 47635521 47650604 - protein_coding KNOWN OTTHUMG00000021452.3 15084 3398 22 ENSG00000126756.10 UXT chrX 47651798 47659161 - protein_coding KNOWN OTTHUMG00000021453.3 7364 1243 24 ENSG00000267064.1 UXT-AS1 chrX 47658833 47660377 + antisense NOVEL OTTHUMG00000180159.1 1545 1545 3 ENSG00000187893.9 CXXC1P1 chrX 47707191 47753456 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000021450.3 46266 3148 16 ENSG00000224656.1 RP1-212G6.4 chrX 47718002 47719099 - processed_pseudogene KNOWN OTTHUMG00000021449.1 1098 1098 1 ENSG00000229968.1 RP3-393P12.1 chrX 47776827 47778697 - processed_pseudogene KNOWN OTTHUMG00000021455.1 1871 1433 2 ENSG00000188459.4 WASF4P chrX 47803296 47804789 + processed_pseudogene KNOWN OTTHUMG00000021456.1 1494 1494 1 ENSG00000279988.1 AL022578.1 chrX 47835953 47836793 - protein_coding KNOWN NA 841 841 1 ENSG00000197779.12 ZNF81 chrX 47836902 48002561 + protein_coding KNOWN OTTHUMG00000021462.2 165660 8443 22 ENSG00000224401.2 RPL7P57 chrX 47840963 47841702 - processed_pseudogene KNOWN OTTHUMG00000021457.1 740 740 1 ENSG00000084754.9 HADHA chr2 26190635 26244726 - protein_coding KNOWN OTTHUMG00000096979.3 54092 3811 31 ENSG00000147118.9 ZNF182 chrX 47974851 48003978 - protein_coding KNOWN OTTHUMG00000021460.2 29128 3587 17 ENSG00000221994.9 ZNF630 chrX 47983356 48071658 - protein_coding KNOWN OTTHUMG00000021463.5 88303 3676 44 ENSG00000171489.9 SPACA5 chrX 48004336 48009729 + protein_coding KNOWN OTTHUMG00000021459.1 5394 732 9 ENSG00000277541.1 ZNF630-AS1 chrX 48056310 48066583 + antisense NOVEL OTTHUMG00000021461.2 10274 397 2 ENSG00000171483.12 SSX6 chrX 48107992 48120210 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000021464.3 12219 1869 14 ENSG00000171478.7 SPACA5B chrX 48130657 48132613 + protein_coding KNOWN OTTHUMG00000021465.1 1957 595 4 ENSG00000230241.1 RP11-38O23.3 chrX 48135658 48136159 - processed_pseudogene KNOWN OTTHUMG00000021466.1 502 228 3 ENSG00000233139.1 RP11-38O23.4 chrX 48153868 48155941 - processed_pseudogene KNOWN OTTHUMG00000021467.2 2074 1669 3 ENSG00000201517.1 RNU6-707P chrX 48153980 48154074 - snRNA KNOWN NA 95 95 1 ENSG00000225198.1 SSXP3 chrX 48156367 48166350 + unprocessed_pseudogene KNOWN OTTHUMG00000021468.1 9984 1300 8 ENSG00000138029.12 HADHB chr2 26243170 26290468 + protein_coding KNOWN OTTHUMG00000096978.3 47299 4280 97 ENSG00000238032.1 RP11-38O23.7 chrX 48177731 48178023 - processed_pseudogene KNOWN OTTHUMG00000021469.1 293 293 1 ENSG00000165583.12 SSX5 chrX 48186220 48277578 - protein_coding KNOWN OTTHUMG00000021471.1 91359 1668 35 ENSG00000234780.1 RP11-552E4.2 chrX 48197221 48199431 + processed_pseudogene KNOWN OTTHUMG00000021470.1 2211 556 4 ENSG00000252856.1 RNA5SP503 chrX 48206258 48206374 + rRNA KNOWN NA 117 117 1 ENSG00000204368.6 RP11-552E4.3 chrX 48212791 48218010 + processed_pseudogene KNOWN OTTHUMG00000021472.1 5220 873 4 ENSG00000231568.1 RP11-552E4.4 chrX 48228833 48228959 - processed_pseudogene KNOWN OTTHUMG00000021473.1 127 127 1 ENSG00000229662.2 RP11-552E4.5 chrX 48244894 48245745 + processed_pseudogene KNOWN OTTHUMG00000021475.2 852 530 2 ENSG00000126752.7 SSX1 chrX 48255317 48267444 + protein_coding KNOWN OTTHUMG00000021488.1 12128 1298 8 ENSG00000232813.1 RP11-344N17.2 chrX 48274904 48275047 - processed_pseudogene KNOWN OTTHUMG00000021480.1 144 144 1 ENSG00000241207.1 RP11-344N17.3 chrX 48276704 48277578 - unprocessed_pseudogene KNOWN OTTHUMG00000021481.1 875 284 3 ENSG00000173567.13 GPR113 chr2 26308173 26346817 - protein_coding KNOWN OTTHUMG00000150225.4 38645 5761 85 ENSG00000237345.1 RP11-344N17.11 chrX 48279423 48281792 + processed_pseudogene KNOWN OTTHUMG00000022692.1 2370 617 4 ENSG00000204648.10 SSX9 chrX 48296816 48306179 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000021490.2 9364 821 11 ENSG00000234391.1 RP11-344N17.6 chrX 48306769 48309055 + processed_pseudogene KNOWN OTTHUMG00000021482.1 2287 523 4 ENSG00000227302.1 SSXP9 chrX 48322349 48326683 + unprocessed_pseudogene KNOWN OTTHUMG00000021484.1 4335 292 3 ENSG00000230100.1 RP11-344N17.8 chrX 48333675 48334439 - lincRNA NOVEL OTTHUMG00000021486.1 765 270 2 ENSG00000270747.1 RP11-344N17.15 chrX 48336899 48337169 - processed_pseudogene KNOWN OTTHUMG00000185038.1 271 271 1 ENSG00000165584.14 SSX3 chrX 48346428 48356707 - protein_coding KNOWN OTTHUMG00000021489.2 10280 2107 25 ENSG00000225055.1 RP11-344N17.9 chrX 48357125 48359495 + processed_pseudogene KNOWN OTTHUMG00000021487.1 2371 765 3 ENSG00000234448.1 RP11-344N17.13 chrX 48371905 48372095 + processed_pseudogene KNOWN OTTHUMG00000021483.1 191 191 1 ENSG00000268009.4 SSX4 chrX 48383516 48393347 + protein_coding KNOWN OTTHUMG00000022698.4 9832 1232 15 ENSG00000138018.16 EPT1 chr2 26308547 26395891 + protein_coding KNOWN OTTHUMG00000151931.3 87345 8552 34 ENSG00000269791.4 SSX4B chrX 48402078 48411910 - protein_coding KNOWN OTTHUMG00000021497.3 9833 1232 15 ENSG00000231603.1 RP11-344N17.12 chrX 48412303 48415285 + processed_pseudogene KNOWN OTTHUMG00000021485.1 2983 760 4 ENSG00000231489.1 AF196972.10 chrX 48423342 48423468 - processed_pseudogene KNOWN OTTHUMG00000024115.1 127 127 1 ENSG00000235350.1 AF196972.3 chrX 48433201 48441619 + unprocessed_pseudogene KNOWN OTTHUMG00000021492.2 8419 319 3 ENSG00000226971.1 AF196972.4 chrX 48446893 48448879 - processed_pseudogene KNOWN OTTHUMG00000021493.3 1987 1330 3 ENSG00000017483.13 SLC38A5 chrX 48458537 48470256 - protein_coding KNOWN OTTHUMG00000024117.10 11720 4014 134 ENSG00000068438.13 FTSJ1 chrX 48476021 48486364 + protein_coding KNOWN OTTHUMG00000024118.2 10344 2872 91 ENSG00000224292.1 AF196972.9 chrX 48506523 48508838 - antisense NOVEL OTTHUMG00000021498.1 2316 653 2 ENSG00000102312.19 PORCN chrX 48508962 48520814 + protein_coding KNOWN OTTHUMG00000024116.7 11853 3012 148 ENSG00000147155.9 EBP chrX 48521158 48528716 + protein_coding KNOWN OTTHUMG00000034482.2 7559 2409 28 ENSG00000157856.9 DRC1 chr2 26401916 26456711 + protein_coding KNOWN OTTHUMG00000125531.4 54796 3048 48 ENSG00000276823.1 Metazoa_SRP chrX 48524480 48524806 + misc_RNA NOVEL NA 327 327 1 ENSG00000068354.14 TBC1D25 chrX 48539457 48562609 + protein_coding KNOWN OTTHUMG00000024123.4 23153 4223 24 ENSG00000204620.3 RP11-1148L6.9 chrX 48568014 48574860 - antisense NOVEL OTTHUMG00000187479.1 6847 549 2 ENSG00000102317.16 RBM3 chrX 48574449 48579066 + protein_coding KNOWN OTTHUMG00000024121.2 4618 3731 52 ENSG00000228343.1 RP11-1148L6.5 chrX 48579774 48581157 - antisense NOVEL OTTHUMG00000024122.1 1384 450 2 ENSG00000279528.1 RP11-1148L6.8 chrX 48580741 48581165 + TEC KNOWN OTTHUMG00000184123.1 425 425 1 ENSG00000220125.1 MRPL32P1 chrX 48583093 48583339 - processed_pseudogene KNOWN OTTHUMG00000048056.3 247 247 1 ENSG00000101940.16 WDR13 chrX 48590042 48608867 + protein_coding KNOWN OTTHUMG00000024119.10 18826 7884 57 ENSG00000231725.1 VN1R110P chrX 48636165 48637135 + processed_pseudogene KNOWN OTTHUMG00000024120.2 971 971 1 ENSG00000015285.9 WAS chrX 48676596 48691427 + protein_coding KNOWN OTTHUMG00000034483.1 14832 2381 43 ENSG00000115155.15 OTOF chr2 26457203 26558698 - protein_coding KNOWN OTTHUMG00000096977.3 101496 7885 189 ENSG00000101945.15 SUV39H1 chrX 48695554 48709012 + protein_coding KNOWN OTTHUMG00000022701.3 13459 3368 18 ENSG00000232828.1 AF196970.3 chrX 48698963 48737163 - antisense NOVEL OTTHUMG00000021501.1 38201 925 3 ENSG00000206723.1 RNU6-1056P chrX 48724455 48724561 - snRNA KNOWN NA 107 107 1 ENSG00000171433.10 GLOD5 chrX 48761750 48773648 + protein_coding KNOWN OTTHUMG00000024125.2 11899 1061 13 ENSG00000233585.1 AC115617.2 chrX 48775993 48776970 - processed_pseudogene KNOWN OTTHUMG00000024126.1 978 978 1 ENSG00000207367.1 RNU6-29P chrX 48776965 48777071 - snRNA KNOWN NA 107 107 1 ENSG00000102145.12 GATA1 chrX 48786554 48794311 + protein_coding KNOWN OTTHUMG00000021504.2 7758 1500 12 ENSG00000094631.17 HDAC6 chrX 48801377 48824982 + protein_coding KNOWN OTTHUMG00000034496.4 23606 10412 272 ENSG00000187682.1 ERAS chrX 48828873 48830138 + protein_coding KNOWN OTTHUMG00000059533.1 1266 1266 1 ENSG00000102109.8 PCSK1N chrX 48831094 48835633 - protein_coding KNOWN OTTHUMG00000034502.3 4540 1363 5 ENSG00000173557.13 C2orf70 chr2 26562582 26579532 + protein_coding KNOWN OTTHUMG00000151994.3 16951 2507 16 ENSG00000126768.11 TIMM17B chrX 48893447 48898143 - protein_coding KNOWN OTTHUMG00000034498.5 4697 2562 49 ENSG00000102103.14 PQBP1 chrX 48897912 48903143 + protein_coding KNOWN OTTHUMG00000024128.4 5232 1903 101 ENSG00000102100.13 SLC35A2 chrX 48903182 48911958 - protein_coding KNOWN OTTHUMG00000024129.3 8777 3222 41 ENSG00000102096.9 PIM2 chrX 48913182 48919024 - protein_coding KNOWN OTTHUMG00000024132.1 5843 2761 10 ENSG00000068308.12 OTUD5 chrX 48922028 48958386 - protein_coding KNOWN OTTHUMG00000024130.2 36359 3592 68 ENSG00000279155.1 LL0XNC01-36H8.1 chrX 48939992 48940808 + TEC KNOWN OTTHUMG00000186881.1 817 817 1 ENSG00000223309.1 RNU6-722P chrX 48959179 48959282 - snRNA KNOWN NA 104 104 1 ENSG00000102057.8 KCND1 chrX 48961378 48971569 - protein_coding KNOWN OTTHUMG00000024127.3 10192 5807 13 ENSG00000068400.12 GRIPAP1 chrX 48973720 49002264 - protein_coding KNOWN OTTHUMG00000033192.8 28545 6841 168 ENSG00000068323.15 TFE3 chrX 49028726 49043486 - protein_coding KNOWN OTTHUMG00000022690.6 14761 4283 32 ENSG00000157884.9 CIB4 chr2 26581202 26641368 - protein_coding KNOWN OTTHUMG00000151993.2 60167 1049 17 ENSG00000147144.11 CCDC120 chrX 49053572 49069857 + protein_coding KNOWN OTTHUMG00000021509.7 16286 5318 65 ENSG00000243279.3 PRAF2 chrX 49071156 49074071 - protein_coding KNOWN OTTHUMG00000034499.4 2916 1736 7 ENSG00000250232.1 AF196779.12 chrX 49071726 49079887 - protein_coding PUTATIVE OTTHUMG00000162142.1 8162 1176 8 ENSG00000196998.14 WDR45 chrX 49074433 49101170 - protein_coding KNOWN OTTHUMG00000034500.4 26738 4480 166 ENSG00000206936.1 RNU4-52P chrX 49082028 49082165 + snRNA KNOWN NA 138 138 1 ENSG00000068394.10 GPKOW chrX 49113389 49123801 - protein_coding KNOWN OTTHUMG00000021511.3 10413 1742 11 ENSG00000265033.2 RN7SL262P chrX 49152651 49152944 + misc_RNA KNOWN NA 294 294 1 ENSG00000280116.1 AC231657.1 chrX 49155242 49157351 - protein_coding KNOWN NA 2110 252 3 ENSG00000269313.4 MAGIX chrX 49162564 49168483 + protein_coding KNOWN OTTHUMG00000188218.10 5920 5107 43 ENSG00000279422.1 RP11-641J8.1 chrX 49165576 49165972 - TEC KNOWN OTTHUMG00000188365.1 397 397 1 ENSG00000225378.1 AC015977.6 chr2 26671254 26674464 - antisense NOVEL OTTHUMG00000151995.1 3211 567 3 ENSG00000102007.9 PLP2 chrX 49171926 49175239 + protein_coding KNOWN OTTHUMG00000021513.1 3314 1279 8 ENSG00000012211.11 PRICKLE3 chrX 49175264 49186528 - protein_coding KNOWN OTTHUMG00000024134.9 11265 3194 46 ENSG00000102003.9 SYP chrX 49187804 49200259 - protein_coding KNOWN OTTHUMG00000034557.6 12456 5215 37 ENSG00000237341.1 SYP-AS1 chrX 49198966 49202454 + antisense NOVEL OTTHUMG00000024133.1 3489 542 2 ENSG00000102001.11 CACNA1F chrX 49205063 49233371 - protein_coding KNOWN OTTHUMG00000022703.4 28309 6928 154 ENSG00000230216.1 HSPB1P2 chrX 49233956 49234501 - processed_pseudogene KNOWN OTTHUMG00000024140.1 546 546 1 ENSG00000101997.11 CCDC22 chrX 49235467 49250526 + protein_coding KNOWN OTTHUMG00000024141.2 15060 2516 28 ENSG00000049768.13 FOXP3 chrX 49250436 49264826 - protein_coding KNOWN OTTHUMG00000024135.3 14391 2647 63 ENSG00000049769.11 PPP1R3F chrX 49269843 49301461 + protein_coding KNOWN OTTHUMG00000024139.3 31619 4173 20 ENSG00000270012.1 LL0XNC01-7P3.1 chrX 49273054 49275768 + lincRNA NOVEL OTTHUMG00000184084.1 2715 2715 1 ENSG00000228549.3 RP11-108M9.3 chr1 16870945 16874092 + lincRNA NOVEL OTTHUMG00000002203.1 3148 2963 10 ENSG00000225024.1 AC015977.5 chr2 26678219 26678510 - processed_pseudogene KNOWN OTTHUMG00000151997.1 292 292 1 ENSG00000215274.5 GAGE10 chrX 49303669 49319844 + protein_coding KNOWN OTTHUMG00000024136.2 16176 538 5 ENSG00000224659.2 GAGE12J chrX 49322057 49329384 + protein_coding KNOWN OTTHUMG00000024137.2 7328 541 5 ENSG00000274274.1 GAGE13 chrX 49331616 49338952 + protein_coding KNOWN OTTHUMG00000024138.5 7337 530 5 ENSG00000275113.1 GAGE2E chrX 49341192 49345922 + protein_coding KNOWN OTTHUMG00000067394.3 4731 403 4 ENSG00000236737.1 GAGE12B chrX 49529869 49529985 + protein_coding KNOWN OTTHUMG00000024142.3 117 117 1 ENSG00000237671.3 GAGE12C chrX 49532211 49539538 + protein_coding KNOWN OTTHUMG00000024144.3 7328 527 5 ENSG00000227488.2 GAGE12D chrX 49541767 49549094 + protein_coding KNOWN OTTHUMG00000024145.3 7328 527 5 ENSG00000216649.3 GAGE12E chrX 49551333 49558649 + protein_coding KNOWN OTTHUMG00000024146.3 7317 520 5 ENSG00000236362.7 GAGE12F chrX 49560876 49568205 + protein_coding KNOWN OTTHUMG00000024147.3 7330 527 5 ENSG00000215269.5 GAGE12G chrX 49570434 49577754 + protein_coding KNOWN OTTHUMG00000024148.3 7321 527 5 ENSG00000171303.6 KCNK3 chr2 26692690 26733420 + protein_coding KNOWN OTTHUMG00000125530.2 40731 6223 5 ENSG00000224902.5 GAGE12H chrX 49579983 49587301 + protein_coding KNOWN OTTHUMG00000024149.3 7319 527 5 ENSG00000205777.16 GAGE1 chrX 49589496 49608536 + protein_coding KNOWN OTTHUMG00000024150.5 19041 3237 20 ENSG00000189064.8 GAGE2A chrX 49589529 49596827 + protein_coding KNOWN OTTHUMG00000024143.3 7299 528 5 ENSG00000213856.3 VDAC1P2 chrX 49632500 49633349 - processed_pseudogene KNOWN OTTHUMG00000024151.3 850 850 1 ENSG00000227391.1 SALL1P1 chrX 49664844 49668680 - processed_pseudogene KNOWN OTTHUMG00000024152.2 3837 3837 1 ENSG00000068985.4 PAGE1 chrX 49687450 49695993 - protein_coding KNOWN OTTHUMG00000033224.1 8544 665 6 ENSG00000101951.15 PAGE4 chrX 49829260 49833973 + protein_coding KNOWN OTTHUMG00000024155.1 4714 1950 16 ENSG00000234390.4 USP27X-AS1 chrX 49876724 49879241 - lincRNA NOVEL OTTHUMG00000024154.2 2518 2175 2 ENSG00000273820.1 USP27X chrX 49879948 49882565 + protein_coding KNOWN OTTHUMG00000189037.1 2618 2618 1 ENSG00000220132.1 AF238380.8 chrX 49911620 49912362 - processed_pseudogene KNOWN OTTHUMG00000048045.1 743 743 1 ENSG00000213699.7 SLC35F6 chr2 26764284 26781231 + protein_coding KNOWN OTTHUMG00000128407.2 16948 3902 19 ENSG00000171365.14 CLCN5 chrX 49922615 50099235 + protein_coding KNOWN OTTHUMG00000021514.5 176621 10619 57 ENSG00000201341.1 RNU6-421P chrX 49945336 49945442 - snRNA KNOWN NA 107 107 1 ENSG00000207758.1 MIR532 chrX 50003148 50003238 + miRNA KNOWN NA 91 91 1 ENSG00000207768.2 MIR188 chrX 50003497 50003607 + miRNA KNOWN NA 111 111 1 ENSG00000265152.2 AC231645.1 chrX 50006637 50006746 + miRNA NOVEL NA 110 110 1 ENSG00000207785.1 MIR500A chrX 50008431 50008514 + miRNA KNOWN NA 84 84 1 ENSG00000208015.1 MIR362 chrX 50008964 50009028 + miRNA KNOWN NA 65 65 1 ENSG00000211538.1 MIR501 chrX 50009722 50009805 + miRNA KNOWN NA 84 84 1 ENSG00000239057.1 MIR500B chrX 50010671 50010749 + miRNA KNOWN NA 79 79 1 ENSG00000207970.2 MIR660 chrX 50013236 50013345 + miRNA KNOWN NA 110 110 1 ENSG00000115163.13 CENPA chr2 26764289 26801067 + protein_coding KNOWN OTTHUMG00000097073.4 36779 1983 29 ENSG00000272080.1 MIR502 chrX 50014598 50014683 + miRNA KNOWN NA 86 86 1 ENSG00000181977.3 PYY3 chrX 50156159 50156371 + processed_pseudogene KNOWN OTTHUMG00000021515.2 213 213 1 ENSG00000202495.1 Y_RNA chrX 50171197 50171297 - misc_RNA NOVEL NA 101 101 1 ENSG00000147081.13 AKAP4 chrX 50190768 50201013 - protein_coding KNOWN OTTHUMG00000021517.1 10246 3042 34 ENSG00000147082.16 CCNB3 chrX 50202713 50351910 + protein_coding KNOWN OTTHUMG00000021519.4 149198 5408 66 ENSG00000274588.1 DGKK chrX 50365409 50470738 - protein_coding KNOWN OTTHUMG00000021520.4 105330 7407 28 ENSG00000158352.14 SHROOM4 chrX 50591647 50814302 - protein_coding KNOWN OTTHUMG00000021521.5 222656 10333 32 ENSG00000265211.2 AL121865.1 chrX 50645112 50645209 + miRNA NOVEL NA 98 98 1 ENSG00000222303.1 RNU6-935P chrX 50649641 50649740 + snRNA KNOWN NA 100 100 1 ENSG00000226881.5 H3F3AP5 chrX 50905438 50905866 + processed_pseudogene KNOWN OTTHUMG00000021523.1 429 429 1 ENSG00000145835.6 CDKN2AIPNLP2 chr2 26827169 26827520 - processed_pseudogene KNOWN OTTHUMG00000151989.2 352 352 1 ENSG00000130385.5 BMP15 chrX 50910784 50916607 + protein_coding KNOWN OTTHUMG00000021525.1 5824 1179 2 ENSG00000238190.1 HMGB1P15 chrX 50931114 50931548 - processed_pseudogene KNOWN OTTHUMG00000021524.1 435 435 1 ENSG00000227493.1 RP11-104D21.1 chrX 51030422 51031357 - unprocessed_pseudogene KNOWN OTTHUMG00000021526.1 936 936 1 ENSG00000230926.1 RP11-104D21.2 chrX 51082818 51091228 + unprocessed_pseudogene KNOWN OTTHUMG00000021527.1 8411 705 5 ENSG00000230317.1 LINC01284 chrX 51095844 51171400 - lincRNA NOVEL OTTHUMG00000021529.1 75557 730 9 ENSG00000237926.1 RP13-346H10.2 chrX 51162864 51163677 + unprocessed_pseudogene KNOWN OTTHUMG00000021528.1 814 814 1 ENSG00000122824.9 NUDT10 chrX 51332231 51337525 + protein_coding KNOWN OTTHUMG00000021530.1 5295 2054 5 ENSG00000229151.1 RP11-348F1.3 chrX 51356944 51396462 - antisense NOVEL OTTHUMG00000021533.1 39519 451 2 ENSG00000226530.1 RP11-348F1.2 chrX 51396511 51465661 + lincRNA NOVEL OTTHUMG00000021532.1 69151 841 4 ENSG00000187690.3 CXorf67 chrX 51406915 51408843 + protein_coding KNOWN OTTHUMG00000187481.1 1929 1929 1 ENSG00000157851.15 DPYSL5 chr2 26847747 26950351 + protein_coding KNOWN OTTHUMG00000097071.2 102605 7079 56 ENSG00000196368.4 NUDT11 chrX 51490011 51496596 - protein_coding KNOWN OTTHUMG00000021531.1 6586 2385 2 ENSG00000234766.1 LINC01496 chrX 51502090 51511005 - lincRNA NOVEL OTTHUMG00000021535.1 8916 460 4 ENSG00000224109.1 CENPVP3 chrX 51618109 51618594 - processed_pseudogene KNOWN OTTHUMG00000021534.1 486 486 1 ENSG00000223591.4 CENPVP1 chrX 51710791 51712131 + transcribed_processed_pseudogene KNOWN OTTHUMG00000021539.2 1341 1341 2 ENSG00000189369.8 GSPT2 chrX 51743431 51746232 + protein_coding KNOWN OTTHUMG00000021538.1 2802 2802 1 ENSG00000179222.16 MAGED1 chrX 51803007 51902357 + protein_coding KNOWN OTTHUMG00000021540.3 99351 6016 81 ENSG00000236576.1 RP11-22B10.3 chrX 51856968 51858066 + processed_pseudogene KNOWN OTTHUMG00000021537.1 1099 1099 1 ENSG00000252377.1 RNU6-504P chrX 51870706 51870809 - snRNA KNOWN NA 104 104 1 ENSG00000228827.1 RP11-234P3.2 chrX 51903338 51903850 - unprocessed_pseudogene KNOWN OTTHUMG00000021541.1 513 154 2 ENSG00000232951.1 IPO7P1 chrX 51921864 51922499 - processed_pseudogene KNOWN OTTHUMG00000021542.1 636 636 1 ENSG00000230286.1 AC013472.4 chr2 26950308 27009807 - antisense NOVEL OTTHUMG00000151992.1 59500 306 2 ENSG00000237528.1 RP11-234P3.4 chrX 51923552 51923740 + processed_pseudogene KNOWN OTTHUMG00000021543.1 189 189 1 ENSG00000232562.1 TPMTP3 chrX 51979223 51980012 - processed_pseudogene KNOWN OTTHUMG00000021544.1 790 735 2 ENSG00000182776.4 RP11-114H20.1 chrX 52050860 52054255 - lincRNA NOVEL OTTHUMG00000021545.1 3396 2369 2 ENSG00000279750.2 RP11-33H15.1 chrX 52053176 52055684 + lincRNA NOVEL OTTHUMG00000189366.1 2509 760 8 ENSG00000187243.15 MAGED4B chrX 52061827 52069248 - protein_coding KNOWN OTTHUMG00000021546.4 7422 4947 94 ENSG00000221705.1 SNORA11E chrX 52063347 52063474 - snoRNA KNOWN NA 128 128 1 ENSG00000154545.15 MAGED4 chrX 52184823 52192268 + protein_coding KNOWN OTTHUMG00000042235.2 7446 4809 99 ENSG00000221475.1 SNORA11D chrX 52190621 52190748 + snoRNA KNOWN NA 128 128 1 ENSG00000179028.4 RP11-363G10.2 chrX 52199840 52203235 + lincRNA NOVEL OTTHUMG00000021548.1 3396 2369 2 ENSG00000274479.1 AC231759.1 chrX 52265772 52265860 + miRNA NOVEL NA 89 89 1 ENSG00000084764.9 MAPRE3 chr2 26970612 27027196 + protein_coding KNOWN OTTHUMG00000097067.2 56585 3459 41 ENSG00000278506.1 AC231759.2 chrX 52288107 52288192 + miRNA NOVEL NA 86 86 1 ENSG00000276474.1 RP11-363G10.3 chrX 52326166 52326762 + processed_pseudogene KNOWN OTTHUMG00000188018.1 597 597 1 ENSG00000275335.1 MIR8088 chrX 52336557 52336642 - miRNA KNOWN NA 86 86 1 ENSG00000155622.6 XAGE2B chrX 52369030 52375680 + protein_coding KNOWN OTTHUMG00000021549.1 6651 618 5 ENSG00000225957.1 CTD-2267G17.2 chrX 52382053 52385614 + unprocessed_pseudogene KNOWN OTTHUMG00000021550.2 3562 312 3 ENSG00000276897.1 RP11-651H2.1 chrX 52409772 52410432 - unprocessed_pseudogene KNOWN OTTHUMG00000188609.1 661 180 2 ENSG00000224556.2 RP11-485B17.3 chrX 52422069 52459066 + unprocessed_pseudogene KNOWN OTTHUMG00000021554.2 36998 237 2 ENSG00000250084.1 RP11-485B17.5 chrX 52448587 52451138 - unprocessed_pseudogene KNOWN OTTHUMG00000021553.1 2552 304 3 ENSG00000278358.1 RP11-485B17.9 chrX 52480836 52481131 + processed_pseudogene KNOWN OTTHUMG00000188019.1 296 296 1 ENSG00000278160.1 RP11-485B17.10 chrX 52481515 52483950 + unprocessed_pseudogene KNOWN OTTHUMG00000188020.1 2436 630 4 ENSG00000205500.7 AC013472.3 chr2 26984776 27014612 - processed_transcript NOVEL OTTHUMG00000151998.2 29837 2563 16 ENSG00000275643.1 RP11-204I15.1 chrX 52485046 52485912 - processed_pseudogene KNOWN OTTHUMG00000188635.1 867 867 1 ENSG00000204379.9 XAGE1A chrX 52495676 52500812 + protein_coding KNOWN OTTHUMG00000021557.3 5137 1071 14 ENSG00000223395.2 RBM22P7 chrX 52509903 52510182 + processed_pseudogene KNOWN OTTHUMG00000021556.2 280 280 1 ENSG00000204382.10 XAGE1B chrX 52512077 52520803 - protein_coding KNOWN OTTHUMG00000163577.2 8727 1414 20 ENSG00000277289.1 RP11-485B17.12 chrX 52531709 52532051 - processed_pseudogene KNOWN OTTHUMG00000188022.1 343 343 1 ENSG00000227058.1 RP13-34L8.7 chrX 52545151 52547695 + unprocessed_pseudogene KNOWN OTTHUMG00000021571.2 2545 305 3 ENSG00000231593.1 RP13-34L8.8 chrX 52561769 52562301 - unprocessed_pseudogene KNOWN OTTHUMG00000150409.1 533 193 2 ENSG00000228771.1 RP11-552J9.1 chrX 52583989 52586312 + unprocessed_pseudogene KNOWN OTTHUMG00000021580.2 2324 306 3 ENSG00000185319.5 SSXP4 chrX 52598494 52603289 + unprocessed_pseudogene KNOWN OTTHUMG00000021581.1 4796 245 3 ENSG00000197185.7 SSXP1 chrX 52606535 52611758 - unprocessed_pseudogene KNOWN OTTHUMG00000021582.1 5224 473 5 ENSG00000119777.17 TMEM214 chr2 27032910 27041695 + protein_coding KNOWN OTTHUMG00000151999.1 8786 4910 106 ENSG00000234792.1 RP11-552J9.6 chrX 52612656 52613523 + processed_pseudogene KNOWN OTTHUMG00000021583.2 868 545 2 ENSG00000157965.11 SSX8 chrX 52624998 52632895 + unprocessed_pseudogene KNOWN OTTHUMG00000021573.4 7898 579 6 ENSG00000187754.8 SSX7 chrX 52644090 52654900 - protein_coding KNOWN OTTHUMG00000021572.1 10811 1311 8 ENSG00000241476.6 SSX2 chrX 52644567 52707189 - protein_coding KNOWN OTTHUMG00000022697.1 62623 1950 28 ENSG00000228354.1 RP11-552J9.9 chrX 52655207 52657254 + processed_pseudogene KNOWN OTTHUMG00000021584.1 2048 751 3 ENSG00000222608.1 RNA5SP504 chrX 52665231 52665347 + rRNA KNOWN NA 117 117 1 ENSG00000225508.1 SSXP5 chrX 52672718 52677051 + unprocessed_pseudogene KNOWN OTTHUMG00000021574.2 4334 287 3 ENSG00000237275.1 RP11-552J9.11 chrX 52687363 52687633 - processed_pseudogene KNOWN OTTHUMG00000021575.1 271 271 1 ENSG00000223958.1 RP11-552J9.12 chrX 52707602 52709933 + processed_pseudogene KNOWN OTTHUMG00000021576.1 2332 759 3 ENSG00000225397.1 RP11-552J9.13 chrX 52722338 52722524 + processed_pseudogene KNOWN OTTHUMG00000021577.1 187 187 1 ENSG00000277234.1 U1 chr1 16873708 16873851 + snRNA NOVEL NA 144 144 1 ENSG00000084693.14 AGBL5 chr2 27042364 27070622 + protein_coding KNOWN OTTHUMG00000128406.6 28259 5283 72 ENSG00000229826.2 RP11-552J9.14 chrX 52735901 52736107 - processed_pseudogene KNOWN OTTHUMG00000021578.2 207 207 1 ENSG00000268447.4 SSX2B chrX 52751132 52790305 + protein_coding KNOWN OTTHUMG00000021593.3 39174 2255 29 ENSG00000269281.2 RP11-564H18.1 chrX 52770809 52771080 + processed_pseudogene KNOWN OTTHUMG00000188636.1 272 272 1 ENSG00000226867.1 RP13-77O11.8 chrX 52781452 52785786 - unprocessed_pseudogene KNOWN OTTHUMG00000021592.2 4335 287 3 ENSG00000204363.4 SPANXN5 chrX 52796144 52798101 - protein_coding KNOWN OTTHUMG00000021590.3 1958 1316 2 ENSG00000229885.1 RP13-77O11.12 chrX 52801400 52801529 - processed_pseudogene KNOWN OTTHUMG00000021586.2 130 130 1 ENSG00000171405.11 XAGE5 chrX 52812204 52818301 + protein_coding KNOWN OTTHUMG00000021589.3 6098 1115 16 ENSG00000196395.7 RP13-77O11.11 chrX 52824269 52829267 - unprocessed_pseudogene KNOWN OTTHUMG00000021585.2 4999 307 3 ENSG00000224781.1 EIF4A2P4 chrX 52832704 52833899 - processed_pseudogene KNOWN OTTHUMG00000021588.1 1196 1196 1 ENSG00000171402.13 XAGE3 chrX 52862525 52868068 - protein_coding KNOWN OTTHUMG00000021587.2 5544 552 10 ENSG00000231636.1 AGBL5-AS1 chr2 27049683 27050264 - antisense NOVEL OTTHUMG00000151996.1 582 407 2 ENSG00000179304.15 FAM156B chrX 52891306 52908560 + protein_coding KNOWN OTTHUMG00000188219.2 17255 4456 29 ENSG00000268350.6 FAM156A chrX 52926402 52995472 - protein_coding KNOWN OTTHUMG00000188220.3 69071 6608 86 ENSG00000278536.1 AC234031.1 chrX 53001527 53001617 + miRNA NOVEL NA 91 91 1 ENSG00000184194.5 GPR173 chrX 53049091 53080615 + protein_coding KNOWN OTTHUMG00000021596.2 31525 4608 5 ENSG00000270497.1 RP1-290F12.3 chrX 53065053 53065548 - processed_pseudogene KNOWN OTTHUMG00000185040.1 496 496 1 ENSG00000184205.13 TSPYL2 chrX 53082367 53088540 + protein_coding KNOWN OTTHUMG00000021597.3 6174 4948 26 ENSG00000234019.1 RP11-236P24.3 chrX 53093710 53094858 - lincRNA NOVEL OTTHUMG00000021599.1 1149 615 2 ENSG00000232593.5 KANTR chrX 53094145 53167014 + lincRNA NOVEL OTTHUMG00000021603.2 72870 2357 16 ENSG00000235224.1 RP11-236P24.1 chrX 53113018 53113274 - processed_pseudogene KNOWN OTTHUMG00000021598.1 257 257 1 ENSG00000231340.1 ACTG1P10 chrX 53142832 53143913 - processed_pseudogene KNOWN OTTHUMG00000021601.2 1082 1082 1 ENSG00000272056.1 RP11-503P10.1 chr2 27053618 27054276 - antisense NOVEL OTTHUMG00000185589.1 659 659 1 ENSG00000266700.1 AL139396.1 chrX 53143034 53143117 - miRNA NOVEL NA 84 84 1 ENSG00000227329.2 RP11-258C19.4 chrX 53164391 53164557 - processed_pseudogene KNOWN OTTHUMG00000021602.2 167 167 1 ENSG00000270189.1 RP11-258C19.7 chrX 53169097 53170914 + lincRNA NOVEL OTTHUMG00000184227.1 1818 1818 1 ENSG00000126012.10 KDM5C chrX 53191321 53225422 - protein_coding KNOWN OTTHUMG00000021606.2 34102 8727 161 ENSG00000276575.1 MIR6895 chrX 53195411 53195488 - miRNA KNOWN NA 78 78 1 ENSG00000277474.1 MIR6894 chrX 53198889 53198945 - miRNA KNOWN NA 57 57 1 ENSG00000235262.1 KDM5C-IT1 chrX 53212408 53214679 - sense_intronic NOVEL OTTHUMG00000021604.1 2272 755 2 ENSG00000124313.11 IQSEC2 chrX 53232876 53321324 - protein_coding KNOWN OTTHUMG00000021608.2 88449 6962 38 ENSG00000226299.2 RP6-29D12.4 chrX 53322990 53323822 + processed_pseudogene KNOWN OTTHUMG00000021611.2 833 833 1 ENSG00000207408.1 Y_RNA chrX 53324562 53324674 + misc_RNA NOVEL NA 113 113 1 ENSG00000229122.1 AGBL5-IT1 chr2 27061038 27061815 + sense_intronic NOVEL OTTHUMG00000151991.1 778 339 2 ENSG00000236571.1 RP6-29D12.3 chrX 53337783 53337973 - processed_pseudogene KNOWN OTTHUMG00000021610.1 191 180 2 ENSG00000234413.1 RP6-29D12.2 chrX 53340986 53341505 + processed_pseudogene KNOWN OTTHUMG00000021609.1 520 520 1 ENSG00000072501.16 SMC1A chrX 53374149 53422728 - protein_coding KNOWN OTTHUMG00000021614.5 48580 10484 68 ENSG00000278204.1 MIR6857 chrX 53405673 53405765 - miRNA KNOWN NA 93 93 1 ENSG00000158423.15 RIBC1 chrX 53422690 53431120 + protein_coding KNOWN OTTHUMG00000021615.3 8431 2993 26 ENSG00000072506.11 HSD17B10 chrX 53431258 53434373 - protein_coding KNOWN OTTHUMG00000021612.1 3116 1115 25 ENSG00000233250.1 RP3-339A18.6 chrX 53432722 53433032 - antisense NOVEL OTTHUMG00000021616.1 311 218 2 ENSG00000235416.1 RP3-339A18.3 chrX 53456273 53457029 - processed_pseudogene KNOWN OTTHUMG00000021613.1 757 757 1 ENSG00000199422.1 VTRNA3-1P chrX 53462209 53462310 + misc_RNA KNOWN NA 102 102 1 ENSG00000086758.14 HUWE1 chrX 53532096 53686729 - protein_coding KNOWN OTTHUMG00000021617.7 154634 17380 346 ENSG00000272148.1 RP11-195B17.1 chr2 27062428 27062907 - antisense NOVEL OTTHUMG00000185590.1 480 480 1 ENSG00000271886.1 MIR98 chrX 53556223 53556341 - miRNA KNOWN NA 119 119 1 ENSG00000208012.1 MIRLET7F2 chrX 53557192 53557274 - miRNA KNOWN NA 83 83 1 ENSG00000224735.1 RP11-272G22.1 chrX 53759026 53759204 + processed_pseudogene KNOWN OTTHUMG00000021618.1 179 179 1 ENSG00000226110.2 RP11-272G22.2 chrX 53768986 53769219 - processed_pseudogene KNOWN OTTHUMG00000021619.2 234 234 1 ENSG00000229037.2 RP11-272G22.3 chrX 53807776 53808623 + processed_pseudogene KNOWN OTTHUMG00000021620.2 848 527 2 ENSG00000235916.1 RP13-444K19.1 chrX 53825887 53826309 + processed_pseudogene KNOWN OTTHUMG00000021621.1 423 423 1 ENSG00000201618.1 RNA5SP505 chrX 53909054 53909161 + rRNA KNOWN NA 108 108 1 ENSG00000172943.17 PHF8 chrX 53936676 54048958 - protein_coding KNOWN OTTHUMG00000021622.2 112283 9016 191 ENSG00000280659.1 AL732374.1 chrX 54028845 54028922 + miRNA NOVEL NA 78 78 1 ENSG00000184083.10 FAM120C chrX 54068324 54183281 - protein_coding KNOWN OTTHUMG00000021625.3 114958 8799 34 ENSG00000228474.4 OST4 chr2 27070472 27071773 - protein_coding KNOWN OTTHUMG00000151990.3 1302 719 8 ENSG00000224949.2 RP11-161N3.3 chrX 54147372 54147659 + processed_pseudogene KNOWN OTTHUMG00000021623.2 288 288 1 ENSG00000196632.9 WNK3 chrX 54192823 54358642 - protein_coding KNOWN OTTHUMG00000021626.2 165820 11472 95 ENSG00000234566.1 RPL7AP71 chrX 54223324 54224062 + processed_pseudogene KNOWN OTTHUMG00000021624.1 739 739 1 ENSG00000207104.1 RNU6-434P chrX 54343546 54343652 + snRNA KNOWN NA 107 107 1 ENSG00000158526.7 TSR2 chrX 54440401 54445487 + protein_coding KNOWN OTTHUMG00000021628.1 5087 1534 5 ENSG00000102302.7 FGD1 chrX 54445454 54496166 - protein_coding KNOWN OTTHUMG00000021627.1 50713 4275 18 ENSG00000130119.14 GNL3L chrX 54530211 54561071 + protein_coding KNOWN OTTHUMG00000021629.1 30861 2589 41 ENSG00000215197.4 PGAM4P1 chrX 54671985 54672638 + processed_pseudogene KNOWN OTTHUMG00000021630.2 654 654 1 ENSG00000102313.8 ITIH6 chrX 54748899 54798240 - protein_coding KNOWN OTTHUMG00000021634.2 49342 5497 15 ENSG00000102316.15 MAGED2 chrX 54807599 54816012 + protein_coding KNOWN OTTHUMG00000021638.3 8414 2940 123 ENSG00000138080.12 EMILIN1 chr2 27078567 27086408 + protein_coding KNOWN OTTHUMG00000097069.4 7842 3958 13 ENSG00000221716.1 SNORA11 chrX 54814370 54814497 + snoRNA KNOWN NA 128 128 1 ENSG00000275387.1 RP6-14C6.3 chrX 54842014 54842134 + unprocessed_pseudogene KNOWN OTTHUMG00000188080.1 121 121 1 ENSG00000067445.19 TRO chrX 54920462 54931431 + protein_coding KNOWN OTTHUMG00000021640.4 10970 6716 164 ENSG00000221750.1 SNORA11 chrX 54927305 54927433 + snoRNA NOVEL NA 129 129 1 ENSG00000158571.9 PFKFB1 chrX 54932961 54998534 - protein_coding KNOWN OTTHUMG00000021643.1 65574 2058 50 ENSG00000169188.4 APEX2 chrX 55000357 55009057 + protein_coding KNOWN OTTHUMG00000021642.1 8701 3245 11 ENSG00000158578.17 ALAS2 chrX 55009055 55031064 - protein_coding KNOWN OTTHUMG00000021641.4 22010 2134 57 ENSG00000278283.1 RP5-884M20.4 chrX 55044749 55045121 - unprocessed_pseudogene KNOWN OTTHUMG00000188081.1 373 373 1 ENSG00000234466.1 RP11-266I3.1 chrX 55054945 55055838 - processed_pseudogene KNOWN OTTHUMG00000021644.1 894 894 1 ENSG00000238269.7 PAGE2B chrX 55075063 55078909 + protein_coding KNOWN OTTHUMG00000021645.1 3847 507 10 ENSG00000138030.11 KHK chr2 27086747 27100772 + protein_coding KNOWN OTTHUMG00000097077.2 14026 3060 43 ENSG00000234068.5 PAGE2 chrX 55089008 55092842 + protein_coding KNOWN OTTHUMG00000021648.5 3835 661 13 ENSG00000158639.10 PAGE5 chrX 55089045 55288785 + protein_coding KNOWN OTTHUMG00000021650.1 199741 919 20 ENSG00000278319.1 RP11-266I3.8 chrX 55101637 55102026 - unprocessed_pseudogene KNOWN OTTHUMG00000188084.1 390 390 1 ENSG00000276929.1 RP11-266I3.9 chrX 55137930 55142433 + unprocessed_pseudogene KNOWN OTTHUMG00000188089.1 4504 943 3 ENSG00000182518.12 FAM104B chrX 55143102 55161310 - protein_coding KNOWN OTTHUMG00000021646.2 18209 2499 23 ENSG00000186678.7 RP11-266I3.7 chrX 55172717 55176026 + unprocessed_pseudogene KNOWN OTTHUMG00000021649.2 3310 313 3 ENSG00000229760.1 RP11-266I3.5 chrX 55178207 55178737 - processed_pseudogene KNOWN OTTHUMG00000021647.1 531 531 1 ENSG00000231947.1 MTND2P24 chrX 55179194 55179999 - processed_pseudogene KNOWN OTTHUMG00000021653.1 806 806 1 ENSG00000238047.1 MTND1P30 chrX 55180377 55181277 - processed_pseudogene KNOWN OTTHUMG00000021652.1 901 901 1 ENSG00000256045.2 MTRNR2L10 chrX 55181391 55182920 - protein_coding KNOWN OTTHUMG00000184991.2 1530 1530 1 ENSG00000138028.13 CGREF1 chr2 27098889 27119115 - protein_coding KNOWN OTTHUMG00000152009.3 20227 4039 45 ENSG00000204279.6 PAGE3 chrX 55258412 55264846 - protein_coding KNOWN OTTHUMG00000021654.4 6435 759 10 ENSG00000232765.5 RP11-382F24.1 chrX 55279839 55288785 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000039439.2 8947 501 9 ENSG00000266328.2 AL590410.1 chrX 55451475 55451585 + miRNA NOVEL NA 111 111 1 ENSG00000187601.4 MAGEH1 chrX 55452105 55453566 + protein_coding KNOWN OTTHUMG00000021655.1 1462 1462 1 ENSG00000247746.4 USP51 chrX 55484616 55489202 - protein_coding KNOWN OTTHUMG00000021656.4 4587 4407 4 ENSG00000277516.1 RP11-541G7.4 chrX 55520382 55520714 - unprocessed_pseudogene KNOWN OTTHUMG00000188096.1 333 333 1 ENSG00000200635.1 Y_RNA chrX 55582733 55582834 + misc_RNA NOVEL NA 102 102 1 ENSG00000235136.1 RP13-146A14.1 chrX 55599663 55600106 - processed_pseudogene KNOWN OTTHUMG00000021658.1 444 444 1 ENSG00000189299.6 FOXR2 chrX 55623400 55625325 + protein_coding KNOWN OTTHUMG00000021661.2 1926 1926 1 ENSG00000229594.1 RP11-167P23.4 chrX 55633031 55635656 - unprocessed_pseudogene KNOWN OTTHUMG00000021660.2 2626 307 3 ENSG00000143994.12 ABHD1 chr2 27123789 27130812 + protein_coding KNOWN OTTHUMG00000097072.5 7024 4630 45 ENSG00000169164.7 RP11-167P23.2 chrX 55654709 55657014 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000021659.4 2306 293 6 ENSG00000083750.11 RRAGB chrX 55717739 55758774 + protein_coding KNOWN OTTHUMG00000021662.1 41036 2725 36 ENSG00000227486.1 RP13-188A5.1 chrX 55908123 56015173 + lincRNA NOVEL OTTHUMG00000021664.1 107051 1007 2 ENSG00000214745.2 RP11-54I5.1 chrX 55961208 55962482 + processed_pseudogene KNOWN OTTHUMG00000021663.1 1275 1275 1 ENSG00000102349.13 KLF8 chrX 56232421 56287889 + protein_coding KNOWN OTTHUMG00000021666.3 55469 9022 30 ENSG00000234135.2 RPL23AP83 chrX 56242937 56243409 - processed_pseudogene KNOWN OTTHUMG00000021665.2 473 473 1 ENSG00000188021.8 UBQLN2 chrX 56563639 56567868 + protein_coding KNOWN OTTHUMG00000021669.1 4230 4230 1 ENSG00000230105.1 RP11-431N15.2 chrX 56618391 56624458 + lincRNA NOVEL OTTHUMG00000021671.1 6068 713 2 ENSG00000204272.9 LINC01420 chrX 56729259 56818380 + processed_transcript NOVEL OTTHUMG00000021676.1 89122 1529 8 ENSG00000237748.1 UQCRBP1 chrX 56737242 56737577 - processed_pseudogene KNOWN OTTHUMG00000021675.2 336 336 1 ENSG00000238142.1 RP11-108M9.4 chr1 16888538 16889649 - lincRNA NOVEL OTTHUMG00000002204.1 1112 508 6 ENSG00000138073.12 PREB chr2 27130756 27134675 - protein_coding KNOWN OTTHUMG00000097076.3 3920 3221 50 ENSG00000224799.1 RP11-445O16.3 chrX 56973510 56974796 + antisense NOVEL OTTHUMG00000021679.1 1287 644 2 ENSG00000204271.9 SPIN3 chrX 56976370 56995537 - protein_coding KNOWN OTTHUMG00000021677.4 19168 2222 12 ENSG00000237708.1 RP11-445O16.2 chrX 57068914 57069685 - processed_pseudogene KNOWN OTTHUMG00000021678.1 772 772 1 ENSG00000186787.7 SPIN2B chrX 57118551 57121547 - protein_coding KNOWN OTTHUMG00000021680.1 2997 1478 13 ENSG00000226310.1 RP3-323P24.3 chrX 57121662 57127243 + antisense NOVEL OTTHUMG00000021681.1 5582 665 2 ENSG00000147059.8 SPIN2A chrX 57134530 57137625 - protein_coding KNOWN OTTHUMG00000022705.1 3096 2889 6 ENSG00000231765.1 PPP1R11P2 chrX 57229034 57229415 + processed_pseudogene KNOWN OTTHUMG00000021682.1 382 382 1 ENSG00000165591.6 FAAH2 chrX 57286706 57489196 + protein_coding KNOWN OTTHUMG00000021684.1 202491 2019 18 ENSG00000231831.1 MTHFD1P1 chrX 57392646 57395409 - processed_pseudogene KNOWN OTTHUMG00000021683.1 2764 2764 1 ENSG00000198455.4 ZXDB chrX 57591652 57597545 + protein_coding KNOWN OTTHUMG00000021685.1 5894 5894 1 ENSG00000186143.9 PRR30 chr2 27136848 27139410 - protein_coding KNOWN OTTHUMG00000128408.4 2563 2008 7 ENSG00000215174.2 RP13-487C10.1 chrX 57677067 57680260 - processed_pseudogene KNOWN OTTHUMG00000021686.1 3194 3194 1 ENSG00000227427.1 RP1-49C23.1 chrX 57766320 57767292 + processed_pseudogene KNOWN OTTHUMG00000021687.1 973 973 1 ENSG00000198205.6 ZXDA chrX 57906708 57910820 - protein_coding KNOWN OTTHUMG00000021688.1 4113 4113 1 ENSG00000228004.1 MYCLP2 chrX 57933837 57934803 - processed_pseudogene KNOWN OTTHUMG00000021689.1 967 967 1 ENSG00000235124.1 KRT8P17 chrX 57984686 57986133 + processed_pseudogene KNOWN OTTHUMG00000021690.2 1448 1448 1 ENSG00000236852.1 RP11-3D23.1 chrX 62779250 62780326 + processed_pseudogene KNOWN OTTHUMG00000021691.1 1077 1077 1 ENSG00000235170.1 MTND1P31 chrX 62842542 62843502 + processed_pseudogene KNOWN OTTHUMG00000021692.1 961 961 1 ENSG00000228182.1 MTND2P25 chrX 62843697 62844306 + processed_pseudogene KNOWN OTTHUMG00000021693.1 610 610 1 ENSG00000234570.1 ZFRP1 chrX 62878811 62884842 - processed_pseudogene KNOWN OTTHUMG00000021694.2 6032 2970 2 ENSG00000277499.1 RP11-144M17.1 chrX 63087071 63088664 + processed_pseudogene KNOWN OTTHUMG00000188098.1 1594 1594 1 ENSG00000163792.6 TCF23 chr2 27149004 27156974 + protein_coding KNOWN OTTHUMG00000152031.2 7971 5123 5 ENSG00000230823.3 CBX1P1 chrX 63299247 63299673 - processed_pseudogene KNOWN OTTHUMG00000021695.2 427 427 1 ENSG00000235437.6 LINC01278 chrX 63343227 63561071 - processed_transcript NOVEL OTTHUMG00000021699.2 217845 6379 22 ENSG00000186767.5 SPIN4 chrX 63347228 63351344 - protein_coding KNOWN OTTHUMG00000021696.2 4117 4117 2 ENSG00000233661.1 SPIN4-AS1 chrX 63349646 63352178 + antisense NOVEL OTTHUMG00000021697.1 2533 426 2 ENSG00000131089.12 ARHGEF9 chrX 63634967 63809274 - protein_coding KNOWN OTTHUMG00000021700.5 174308 7411 129 ENSG00000231729.1 ARHGEF9-IT1 chrX 63670196 63671502 - sense_intronic NOVEL OTTHUMG00000021698.1 1307 394 2 ENSG00000236813.1 BTF3P8 chrX 63766875 63767400 + processed_pseudogene KNOWN OTTHUMG00000021701.1 526 526 1 ENSG00000222532.1 MIR1468 chrX 63786002 63786087 - miRNA KNOWN NA 86 86 1 ENSG00000232794.1 HNRNPDP1 chrX 64044305 64045058 + processed_pseudogene KNOWN OTTHUMG00000021702.1 754 754 1 ENSG00000226010.1 RP11-403E24.1 chrX 64144872 64147052 - processed_pseudogene KNOWN OTTHUMG00000039913.1 2181 1771 2 ENSG00000236099.1 AC013403.13 chr2 27158563 27159229 - unprocessed_pseudogene KNOWN OTTHUMG00000152030.1 667 263 2 ENSG00000184675.8 AMER1 chrX 64185117 64205744 - protein_coding KNOWN OTTHUMG00000021703.2 20628 8443 5 ENSG00000244006.3 RN7SL799P chrX 64210691 64210988 + misc_RNA KNOWN NA 298 298 1 ENSG00000198881.9 ASB12 chrX 64224196 64230631 - protein_coding KNOWN OTTHUMG00000021705.2 6436 1289 3 ENSG00000102043.14 MTMR8 chrX 64268081 64395431 - protein_coding KNOWN OTTHUMG00000021707.2 127351 2782 27 ENSG00000213754.2 RP11-284B18.3 chrX 64305047 64306733 - processed_pseudogene KNOWN OTTHUMG00000021704.1 1687 1436 2 ENSG00000230889.2 SHC1P1 chrX 64432401 64434145 + processed_pseudogene KNOWN OTTHUMG00000021706.2 1745 1745 1 ENSG00000227261.1 YWHAZP7 chrX 64612632 64613262 - processed_pseudogene KNOWN OTTHUMG00000021708.1 631 631 1 ENSG00000226502.2 KRT8P27 chrX 64623117 64624573 + processed_pseudogene KNOWN OTTHUMG00000021709.2 1457 1457 1 ENSG00000225814.1 GRPEL2P2 chrX 64697878 64698547 - processed_pseudogene KNOWN OTTHUMG00000021710.1 670 670 1 ENSG00000236982.1 BLOC1S2P1 chrX 64726748 64727048 - processed_pseudogene KNOWN OTTHUMG00000021711.1 301 301 1 ENSG00000138074.13 SLC5A6 chr2 27199587 27212958 - protein_coding KNOWN OTTHUMG00000097075.7 13372 5606 119 ENSG00000126970.14 ZC4H2 chrX 64915802 65034713 - protein_coding KNOWN OTTHUMG00000021712.1 118912 5173 36 ENSG00000237971.1 RP11-231N9.1 chrX 65185018 65187265 - processed_pseudogene KNOWN OTTHUMG00000021714.1 2248 1362 3 ENSG00000266526.2 AL445523.1 chrX 65215237 65215342 + miRNA NOVEL NA 106 106 1 ENSG00000225569.1 CCT4P2 chrX 65270913 65273019 + processed_pseudogene KNOWN OTTHUMG00000021713.1 2107 1548 3 ENSG00000231857.1 MORF4L1P5 chrX 65327988 65331233 - processed_pseudogene KNOWN OTTHUMG00000021715.1 3246 961 2 ENSG00000237963.1 RP11-151G12.2 chrX 65356890 65357547 - processed_pseudogene KNOWN OTTHUMG00000021716.1 658 658 1 ENSG00000102053.12 ZC3H12B chrX 65366638 65507887 + protein_coding KNOWN OTTHUMG00000021719.5 141250 7829 11 ENSG00000228158.2 TLE1P1 chrX 65408084 65408672 + processed_pseudogene KNOWN OTTHUMG00000021718.1 589 589 1 ENSG00000227534.1 RP3-323B6.1 chrX 65469087 65470380 + processed_pseudogene KNOWN OTTHUMG00000021717.1 1294 968 2 ENSG00000001497.15 LAS1L chrX 65512582 65534775 - protein_coding KNOWN OTTHUMG00000021720.2 22194 5589 54 ENSG00000138085.15 ATRAID chr2 27212027 27217178 + protein_coding KNOWN OTTHUMG00000128405.5 5152 2019 38 ENSG00000227942.1 FRMD8P1 chrX 65550898 65552421 - processed_pseudogene KNOWN OTTHUMG00000021721.1 1524 1524 1 ENSG00000147065.15 MSN chrX 65588377 65741931 + protein_coding KNOWN OTTHUMG00000021723.3 153555 5971 29 ENSG00000231809.4 NANOGP9 chrX 65772741 65773632 - processed_pseudogene KNOWN OTTHUMG00000021724.4 892 892 1 ENSG00000276689.1 RP11-314A15.3 chrX 65786763 65787169 + processed_pseudogene KNOWN OTTHUMG00000188099.1 407 407 1 ENSG00000233833.1 ETF1P3 chrX 65794345 65795835 + processed_pseudogene KNOWN OTTHUMG00000021725.1 1491 1160 2 ENSG00000230039.1 RP11-314A15.2 chrX 65821255 65822249 - processed_pseudogene KNOWN OTTHUMG00000021726.1 995 995 1 ENSG00000217835.3 RP6-159A1.2 chrX 65956289 65957196 - processed_pseudogene KNOWN OTTHUMG00000021728.1 908 908 1 ENSG00000237311.1 RP6-159A1.3 chrX 65999751 66001071 + antisense NOVEL OTTHUMG00000021729.1 1321 857 2 ENSG00000274536.3 RP6-159A1.4 chrX 66015461 66020422 + antisense NOVEL OTTHUMG00000188128.1 4962 1815 5 ENSG00000207939.1 MIR223 chrX 66018870 66018979 + miRNA KNOWN NA 110 110 1 ENSG00000084774.12 CAD chr2 27217390 27243943 + protein_coding KNOWN OTTHUMG00000097070.4 26554 8422 126 ENSG00000155659.13 VSIG4 chrX 66021738 66040125 - protein_coding KNOWN OTTHUMG00000021727.2 18388 2192 29 ENSG00000215168.2 RP11-30M20.1 chrX 66055587 66056587 - processed_pseudogene KNOWN OTTHUMG00000021730.1 1001 1001 1 ENSG00000237294.1 EIF4BP9 chrX 66074835 66076347 - processed_pseudogene KNOWN OTTHUMG00000021731.1 1513 1513 1 ENSG00000089472.15 HEPH chrX 66162549 66268867 + protein_coding KNOWN OTTHUMG00000021732.5 106319 7113 126 ENSG00000231356.1 RP13-238N7.2 chrX 66360766 66361776 - processed_pseudogene KNOWN OTTHUMG00000021733.1 1011 1011 1 ENSG00000226820.2 RP11-747I9.1 chrX 66437345 66440668 + unprocessed_pseudogene KNOWN OTTHUMG00000021734.1 3324 1188 3 ENSG00000235892.1 PKMP2 chrX 66497748 66499424 + processed_pseudogene KNOWN OTTHUMG00000021735.1 1677 1677 1 ENSG00000131080.13 EDA2R chrX 66595637 66639298 - protein_coding KNOWN OTTHUMG00000021736.1 43662 3579 27 ENSG00000222667.1 RNU6-394P chrX 66676258 66676364 - snRNA KNOWN NA 107 107 1 ENSG00000226280.2 RP6-22P16.1 chrX 67373573 67375520 + processed_pseudogene KNOWN OTTHUMG00000021737.2 1948 1948 1 ENSG00000115194.9 SLC30A3 chr2 27253684 27275817 - protein_coding KNOWN OTTHUMG00000128409.3 22134 5978 52 ENSG00000233710.1 RP4-808O4.2 chrX 67533163 67533987 + processed_pseudogene KNOWN OTTHUMG00000021738.1 825 825 1 ENSG00000169083.14 AR chrX 67544032 67730619 + protein_coding KNOWN OTTHUMG00000021740.2 186588 12775 52 ENSG00000280956.1 AL049564.1 chrX 67545277 67545422 + miRNA NOVEL NA 146 146 1 ENSG00000234201.1 BMI1P1 chrX 67791955 67792895 - processed_pseudogene KNOWN OTTHUMG00000021739.1 941 941 1 ENSG00000260118.1 RP6-201G10.2 chrX 68013470 68014901 - lincRNA NOVEL OTTHUMG00000175555.2 1432 1432 1 ENSG00000079482.12 OPHN1 chrX 68042344 68433913 - protein_coding KNOWN OTTHUMG00000021744.1 391570 8224 41 ENSG00000228328.2 RP11-516A11.1 chrX 68070520 68071767 - processed_pseudogene KNOWN OTTHUMG00000021741.2 1248 1248 1 ENSG00000252145.1 RNU6-1225P chrX 68102068 68102132 - snRNA KNOWN NA 65 65 1 ENSG00000228125.2 AKIRIN1P2 chrX 68132868 68133437 + processed_pseudogene KNOWN OTTHUMG00000021742.2 570 570 1 ENSG00000206646.1 Y_RNA chrX 68361075 68361187 + misc_RNA NOVEL NA 113 113 1 ENSG00000163793.11 DNAJC5G chr2 27275421 27281499 + protein_coding KNOWN OTTHUMG00000097079.2 6079 2350 32 ENSG00000225925.1 RP13-313G19.2 chrX 68474710 68476874 + processed_pseudogene KNOWN OTTHUMG00000021743.1 2165 1015 3 ENSG00000181704.10 YIPF6 chrX 68498323 68537285 + protein_coding KNOWN OTTHUMG00000021745.1 38963 8850 35 ENSG00000206747.1 RNU6-245P chrX 68539443 68539549 - snRNA KNOWN NA 107 107 1 ENSG00000236735.3 RPL31P63 chrX 68600099 68600473 + processed_pseudogene KNOWN OTTHUMG00000021746.1 375 375 1 ENSG00000234463.1 COX6CP12 chrX 68645326 68645527 - processed_pseudogene KNOWN OTTHUMG00000021747.1 202 202 1 ENSG00000130052.12 STARD8 chrX 68647666 68725842 + protein_coding KNOWN OTTHUMG00000021748.2 78177 5558 59 ENSG00000232267.1 ACTR3P2 chrX 68771322 68772578 + processed_pseudogene KNOWN OTTHUMG00000021749.1 1257 1257 1 ENSG00000213740.2 SERBP1P1 chrX 68783472 68785066 + processed_pseudogene KNOWN OTTHUMG00000021750.1 1595 1160 2 ENSG00000090776.5 EFNB1 chrX 68828997 68842147 + protein_coding KNOWN OTTHUMG00000021751.1 13151 3314 5 ENSG00000181191.11 PJA1 chrX 69160851 69165793 - protein_coding KNOWN OTTHUMG00000021753.5 4943 3117 14 ENSG00000138100.12 TRIM54 chr2 27282392 27307439 + protein_coding KNOWN OTTHUMG00000097078.3 25048 2764 24 ENSG00000172186.7 HMGN1P35 chrX 69174124 69174717 + processed_pseudogene KNOWN OTTHUMG00000021752.1 594 594 1 ENSG00000215162.1 LINC00269 chrX 69179557 69209924 + lincRNA KNOWN OTTHUMG00000021754.2 30368 2173 5 ENSG00000231706.2 CYCSP43 chrX 69485343 69485652 - processed_pseudogene KNOWN OTTHUMG00000021755.2 310 310 1 ENSG00000264604.1 AL158069.1 chrX 69504705 69504823 + miRNA NOVEL NA 119 119 1 ENSG00000130054.4 FAM155B chrX 69505241 69532508 + protein_coding KNOWN OTTHUMG00000021756.1 27268 4013 3 ENSG00000228160.1 RP13-57D9.3 chrX 69569669 69570357 - lincRNA NOVEL OTTHUMG00000021757.1 689 455 2 ENSG00000158813.16 EDA chrX 69616067 70039469 + protein_coding KNOWN OTTHUMG00000021764.6 423403 6999 64 ENSG00000272351.1 5S_rRNA chrX 69672479 69672597 + rRNA NOVEL NA 119 119 1 ENSG00000212434.2 U3 chrX 69692956 69693155 + snoRNA NOVEL NA 200 200 1 ENSG00000233229.1 CNOT7P1 chrX 69937166 69938017 - processed_pseudogene KNOWN OTTHUMG00000021759.1 852 852 1 ENSG00000235241.1 RP11-108M9.5 chr1 16889095 16889602 + processed_pseudogene KNOWN OTTHUMG00000002205.1 508 508 1 ENSG00000163794.6 UCN chr2 27307400 27308445 - protein_coding KNOWN OTTHUMG00000097068.4 1046 795 2 ENSG00000211991.3 AL158141.1 chrX 70022829 70022939 + miRNA NOVEL NA 111 111 1 ENSG00000147160.8 AWAT2 chrX 70040542 70049938 - protein_coding KNOWN OTTHUMG00000021763.2 9397 2453 16 ENSG00000189401.2 OTUD6A chrX 70062491 70064179 + protein_coding KNOWN OTTHUMG00000159996.1 1689 1689 1 ENSG00000226579.1 RP11-351K23.3 chrX 70120353 70121474 - processed_pseudogene KNOWN OTTHUMG00000021761.1 1122 1122 1 ENSG00000235382.1 MTND4P31 chrX 70124972 70129071 - processed_pseudogene KNOWN OTTHUMG00000021760.1 4100 1343 5 ENSG00000089289.14 IGBP1 chrX 70133449 70166324 + protein_coding KNOWN OTTHUMG00000021767.1 32876 1862 13 ENSG00000220925.2 IGBP1-AS2 chrX 70148582 70149654 - antisense NOVEL OTTHUMG00000021762.2 1073 513 2 ENSG00000203588.3 IGBP1-AS1 chrX 70163842 70165206 - antisense NOVEL OTTHUMG00000021766.1 1365 542 2 ENSG00000184210.5 DGAT2L6 chrX 70177483 70205545 + protein_coding KNOWN OTTHUMG00000021774.1 28063 1553 7 ENSG00000242657.3 RN7SL581P chrX 70222006 70222314 - misc_RNA KNOWN NA 309 309 1 ENSG00000115204.13 MPV17 chr2 27309492 27325680 - protein_coding KNOWN OTTHUMG00000097074.6 16189 5625 129 ENSG00000204195.3 AWAT1 chrX 70234655 70240627 + protein_coding KNOWN OTTHUMG00000021773.3 5973 1434 11 ENSG00000200473.1 RNA5SP507 chrX 70253042 70253162 + rRNA KNOWN NA 121 121 1 ENSG00000186912.6 P2RY4 chrX 70258170 70259764 - protein_coding KNOWN OTTHUMG00000021769.2 1595 1595 1 ENSG00000120500.16 ARR3 chrX 70268305 70281840 + protein_coding KNOWN OTTHUMG00000021768.2 13536 1729 60 ENSG00000147127.7 RAB41 chrX 70282093 70285002 + protein_coding KNOWN OTTHUMG00000021772.4 2910 1344 19 ENSG00000120509.9 PDZD11 chrX 70286595 70290514 - protein_coding KNOWN OTTHUMG00000021771.1 3920 1393 25 ENSG00000090889.11 KIF4A chrX 70290090 70420832 + protein_coding KNOWN OTTHUMG00000021775.1 130743 4533 35 ENSG00000231053.1 RP13-26D14.2 chrX 70361486 70362374 - processed_pseudogene KNOWN OTTHUMG00000021770.1 889 349 2 ENSG00000201377.1 RNY4P23 chrX 70396279 70396375 + misc_RNA KNOWN NA 97 97 1 ENSG00000277312.1 AL139398.1 chrX 70408176 70408284 - miRNA NOVEL NA 109 109 1 ENSG00000115207.12 GTF3C2 chr2 27325849 27357034 - protein_coding KNOWN OTTHUMG00000097785.7 31186 5839 95 ENSG00000130055.12 GDPD2 chrX 70423031 70433390 + protein_coding KNOWN OTTHUMG00000021776.1 10360 2638 73 ENSG00000082458.10 DLG3 chrX 70444861 70505490 + protein_coding KNOWN OTTHUMG00000021778.3 60630 7844 114 ENSG00000200431.1 RNU4-81P chrX 70450879 70451022 + snRNA KNOWN NA 144 144 1 ENSG00000231651.1 DLG3-AS1 chrX 70452958 70455994 - antisense NOVEL OTTHUMG00000021777.1 3037 482 4 ENSG00000120498.12 TEX11 chrX 70528940 70908731 - protein_coding KNOWN OTTHUMG00000021782.2 379792 3371 109 ENSG00000230187.1 RP11-291O7.1 chrX 70672895 70673515 - processed_pseudogene KNOWN OTTHUMG00000039969.1 621 297 2 ENSG00000277492.1 ACEA_U3 chrX 70846079 70846295 - snoRNA NOVEL NA 217 217 1 ENSG00000280704.1 U3 chrX 70846080 70846295 - snoRNA NOVEL NA 216 216 1 ENSG00000213747.2 RP13-278H16.2 chrX 70857163 70857502 + processed_pseudogene KNOWN OTTHUMG00000021779.1 340 340 1 ENSG00000165349.10 SLC7A3 chrX 70925582 70931125 - protein_coding KNOWN OTTHUMG00000021780.1 5544 2265 24 ENSG00000234945.6 GTF3C2-AS1 chr2 27335535 27342599 + antisense NOVEL OTTHUMG00000151913.6 7065 3253 36 ENSG00000230629.2 RPS23P8 chrX 70962964 70963293 + processed_pseudogene KNOWN OTTHUMG00000021781.2 330 330 1 ENSG00000229324.1 NUTF2P7 chrX 71016531 71016905 - processed_pseudogene KNOWN OTTHUMG00000021783.1 375 375 1 ENSG00000212605.1 RNU1-56P chrX 71020275 71020438 - snRNA KNOWN NA 164 164 1 ENSG00000227536.1 SOCS5P4 chrX 71043214 71045470 - processed_pseudogene KNOWN OTTHUMG00000021784.1 2257 1566 3 ENSG00000147164.10 SNX12 chrX 71056332 71073426 - protein_coding KNOWN OTTHUMG00000021786.2 17095 2595 29 ENSG00000184481.15 FOXO4 chrX 71096197 71103535 + protein_coding KNOWN OTTHUMG00000021789.1 7339 3447 12 ENSG00000204165.5 CXorf65 chrX 71103889 71106788 - protein_coding KNOWN OTTHUMG00000021785.4 2900 1128 16 ENSG00000147168.11 IL2RG chrX 71107404 71112108 - protein_coding KNOWN OTTHUMG00000021787.2 4705 2760 48 ENSG00000184634.14 MED12 chrX 71118556 71142454 + protein_coding KNOWN OTTHUMG00000021788.3 23899 7425 157 ENSG00000265597.1 AL590764.1 chrX 71141185 71141306 + miRNA NOVEL NA 122 122 1 ENSG00000234072.1 AC074117.10 chr2 27356246 27367622 + antisense NOVEL OTTHUMG00000151914.1 11377 3412 7 ENSG00000196338.11 NLGN3 chrX 71144831 71171201 + protein_coding KNOWN OTTHUMG00000021790.1 26371 4006 39 ENSG00000228427.1 RP5-1091N2.9 chrX 71183559 71198175 - antisense NOVEL OTTHUMG00000021796.2 14617 726 2 ENSG00000169562.9 GJB1 chrX 71215194 71225516 + protein_coding KNOWN OTTHUMG00000021797.1 10323 2235 9 ENSG00000147130.13 ZMYM3 chrX 71239624 71255146 - protein_coding KNOWN OTTHUMG00000021799.1 15523 6916 145 ENSG00000147140.14 NONO chrX 71283192 71301168 + protein_coding KNOWN OTTHUMG00000021798.2 17977 5292 106 ENSG00000147166.9 ITGB1BP2 chrX 71301734 71305371 + protein_coding KNOWN OTTHUMG00000021793.1 3638 2201 32 ENSG00000224208.1 AL590762.6 chrX 71314912 71315879 - processed_pseudogene KNOWN OTTHUMG00000021791.1 968 640 2 ENSG00000281075.1 Metazoa_SRP chrX 71319394 71319658 - misc_RNA NOVEL NA 265 265 1 ENSG00000213706.2 AL590762.7 chrX 71352418 71352988 + processed_pseudogene KNOWN OTTHUMG00000021792.1 571 571 1 ENSG00000147133.14 TAF1 chrX 71366239 71532374 + protein_coding KNOWN OTTHUMG00000022723.6 166136 10860 233 ENSG00000115211.14 EIF2B4 chr2 27364352 27370486 - protein_coding KNOWN OTTHUMG00000151927.2 6135 5341 112 ENSG00000275975.1 Metazoa_SRP chrX 71368666 71368968 + misc_RNA NOVEL NA 303 303 1 ENSG00000229601.1 AL590762.10 chrX 71413834 71414086 - processed_pseudogene KNOWN OTTHUMG00000021794.1 253 253 1 ENSG00000213018.2 AL590762.11 chrX 71420083 71420514 - processed_pseudogene KNOWN OTTHUMG00000021795.1 432 432 1 ENSG00000199751.1 Y_RNA chrX 71491066 71491167 - misc_RNA NOVEL NA 102 102 1 ENSG00000243468.5 INGX chrX 71491682 71492928 - transcribed_processed_pseudogene KNOWN OTTHUMG00000024051.3 1247 1247 2 ENSG00000215120.2 AL590763.5 chrX 71527814 71530225 - processed_pseudogene KNOWN OTTHUMG00000039977.1 2412 1545 2 ENSG00000147162.12 OGT chrX 71533083 71575897 + protein_coding KNOWN OTTHUMG00000033316.5 42815 9812 93 ENSG00000147174.10 ACRC chrX 71578411 71613583 + protein_coding KNOWN OTTHUMG00000033327.1 35173 3621 28 ENSG00000186810.7 CXCR3 chrX 71615916 71618517 - protein_coding KNOWN OTTHUMG00000033326.2 2602 1868 4 ENSG00000264855.1 AL590763.1 chrX 71625753 71625855 - miRNA NOVEL NA 103 103 1 ENSG00000115234.9 SNX17 chr2 27370496 27377533 + protein_coding KNOWN OTTHUMG00000097781.2 7038 3765 91 ENSG00000281405.1 AL590763.2 chrX 71632223 71632361 - miRNA NOVEL NA 139 139 1 ENSG00000237265.4 RP11-402P6.9 chrX 71662995 71665753 - processed_transcript NOVEL OTTHUMG00000022722.1 2759 984 9 ENSG00000230934.1 RP11-402P6.2 chrX 71691932 71692179 + processed_pseudogene KNOWN OTTHUMG00000022682.1 248 248 1 ENSG00000281852.1 LINC00891 chrX 71697196 71706455 + lincRNA KNOWN OTTHUMG00000189559.1 9260 4113 3 ENSG00000215115.6 CXorf49 chrX 71714371 71718151 - protein_coding KNOWN OTTHUMG00000022702.2 3781 1756 11 ENSG00000226870.2 RP11-402P6.13 chrX 71719142 71721278 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000186915.1 2137 834 7 ENSG00000237182.1 RP11-402P6.3 chrX 71736454 71736703 - processed_pseudogene KNOWN OTTHUMG00000021800.1 250 250 1 ENSG00000237717.1 RP11-402P6.4 chrX 71744828 71745077 + processed_pseudogene KNOWN OTTHUMG00000021801.1 250 250 1 ENSG00000231774.1 RP11-402P6.11 chrX 71760775 71761659 - lincRNA NOVEL OTTHUMG00000021805.1 885 220 3 ENSG00000234442.2 RP11-402P6.12 chrX 71761968 71762433 - unprocessed_pseudogene KNOWN OTTHUMG00000186891.1 466 466 1 ENSG00000163795.12 ZNF513 chr2 27377231 27380790 - protein_coding KNOWN OTTHUMG00000097783.2 3560 2365 13 ENSG00000215113.6 CXorf49B chrX 71763424 71767204 + protein_coding KNOWN OTTHUMG00000021804.2 3781 1756 11 ENSG00000224617.1 RP11-402P6.5 chrX 71789386 71789636 - processed_pseudogene KNOWN OTTHUMG00000021802.1 251 251 1 ENSG00000229030.1 RP11-402P6.6 chrX 71848775 71849004 + processed_pseudogene KNOWN OTTHUMG00000021803.1 230 230 1 ENSG00000201392.1 RNU6-1078P chrX 71965972 71966074 - snRNA KNOWN NA 103 103 1 ENSG00000196933.5 RPS26P11 chrX 72044545 72044892 + processed_pseudogene KNOWN OTTHUMG00000021806.2 348 348 1 ENSG00000242732.4 RGAG4 chrX 72127110 72131901 - protein_coding KNOWN OTTHUMG00000021808.2 4792 4779 3 ENSG00000248345.1 RP11-262D11.1 chrX 72132150 72134706 + unprocessed_pseudogene KNOWN OTTHUMG00000039985.1 2557 165 2 ENSG00000204131.7 NHSL2 chrX 72133649 72141362 + protein_coding KNOWN OTTHUMG00000021807.2 7714 3978 5 ENSG00000225471.4 RP11-262D11.2 chrX 72144184 72161750 + transcribed_processed_pseudogene KNOWN OTTHUMG00000021809.2 17567 2269 3 ENSG00000102309.11 PIN4 chrX 72181353 72302926 + protein_coding KNOWN OTTHUMG00000021811.2 121574 4011 27 ENSG00000115241.10 PPM1G chr2 27381194 27409687 - protein_coding KNOWN OTTHUMG00000097788.2 28494 4092 20 ENSG00000239577.3 RN7SL388P chrX 72198712 72199050 + misc_RNA KNOWN NA 339 339 1 ENSG00000186871.6 ERCC6L chrX 72204657 72239047 - protein_coding KNOWN OTTHUMG00000021810.3 34391 4364 5 ENSG00000198034.9 RPS4X chrX 72255679 72277300 - protein_coding KNOWN OTTHUMG00000021813.2 21622 2982 22 ENSG00000238926.1 Y_RNA chrX 72284945 72285045 - misc_RNA NOVEL NA 101 101 1 ENSG00000125931.9 CITED1 chrX 72301638 72307187 - protein_coding KNOWN OTTHUMG00000021812.2 5550 1760 35 ENSG00000147099.18 HDAC8 chrX 72329516 72573103 - protein_coding KNOWN OTTHUMG00000021814.3 243588 5379 107 ENSG00000222810.1 RNU2-68P chrX 72376979 72377169 - snRNA KNOWN NA 191 191 1 ENSG00000067177.13 PHKA1 chrX 72578814 72714319 - protein_coding KNOWN OTTHUMG00000022696.1 135506 6350 158 ENSG00000225858.1 RP1-172N19.3 chrX 72660470 72660719 + processed_pseudogene KNOWN OTTHUMG00000021816.1 250 250 1 ENSG00000231944.1 PHKA1-AS1 chrX 72688950 72712348 + antisense NOVEL OTTHUMG00000021815.1 23399 598 5 ENSG00000213453.3 FTH1P3 chr2 27392784 27393367 - processed_pseudogene KNOWN OTTHUMG00000151928.1 584 584 1 ENSG00000273788.1 U3 chrX 72726122 72726337 - snoRNA NOVEL NA 216 216 1 ENSG00000213698.2 RP1-172N19.4 chrX 72727977 72728821 - processed_pseudogene KNOWN OTTHUMG00000021817.2 845 845 1 ENSG00000201271.1 RNU1-112P chrX 72740706 72740869 - snRNA KNOWN NA 164 164 1 ENSG00000184911.13 DMRTC1B chrX 72777009 72848802 + protein_coding KNOWN OTTHUMG00000021818.6 71794 1913 37 ENSG00000269911.1 RP1-172N19.5 chrX 72777608 72779097 + sense_intronic NOVEL OTTHUMG00000184072.1 1490 1490 1 ENSG00000268994.2 RP1-172N19.1 chrX 72781883 72782594 - lincRNA NOVEL OTTHUMG00000188221.2 712 381 3 ENSG00000225396.4 RP11-69A21.2 chrX 72807425 72808210 - lincRNA NOVEL OTTHUMG00000021819.2 786 463 6 ENSG00000269502.4 DMRTC1 chrX 72872025 72943814 - protein_coding KNOWN OTTHUMG00000021820.6 71790 1853 23 ENSG00000275520.1 LINC00684 chrX 72938163 72938958 + lincRNA KNOWN OTTHUMG00000188527.1 796 465 6 ENSG00000226725.2 PABPC1L2B-AS1 chrX 72998388 73002856 - antisense NOVEL OTTHUMG00000021822.2 4469 1167 4 ENSG00000207005.1 RNU1-2 chr1 16895980 16896143 + snRNA KNOWN NA 164 164 1 ENSG00000115216.12 NRBP1 chr2 27427790 27442259 + protein_coding KNOWN OTTHUMG00000097789.2 14470 5329 86 ENSG00000184388.5 PABPC1L2B chrX 73003517 73005713 + protein_coding KNOWN OTTHUMG00000021823.1 2197 2197 1 ENSG00000186288.5 PABPC1L2A chrX 73077276 73079512 - protein_coding KNOWN OTTHUMG00000021824.1 2237 2237 1 ENSG00000231963.1 RP11-493K23.4 chrX 73080167 73084635 + antisense NOVEL OTTHUMG00000021825.1 4469 1167 4 ENSG00000204118.1 NAP1L6 chrX 73126037 73128080 - protein_coding KNOWN OTTHUMG00000021826.1 2044 2044 1 ENSG00000186462.8 NAP1L2 chrX 73212299 73214848 - protein_coding KNOWN OTTHUMG00000021827.1 2550 2550 1 ENSG00000230311.2 TOMM20P4 chrX 73223124 73223558 + processed_pseudogene KNOWN OTTHUMG00000021830.2 435 435 1 ENSG00000237014.1 AC004074.4 chrX 73237647 73238709 - processed_pseudogene KNOWN OTTHUMG00000021829.1 1063 1063 1 ENSG00000225664.3 YWHAZP8 chrX 73274785 73275515 + processed_pseudogene KNOWN OTTHUMG00000021828.2 731 731 1 ENSG00000207486.1 RNU6-1044P chrX 73397531 73397637 - snRNA KNOWN NA 107 107 1 ENSG00000131264.3 CDX4 chrX 73447254 73455245 + protein_coding KNOWN OTTHUMG00000021831.2 7992 1515 3 ENSG00000157992.11 KRTCAP3 chr2 27442366 27446481 + protein_coding KNOWN OTTHUMG00000097782.2 4116 1403 37 ENSG00000233162.1 MORF4L1P6 chrX 73474563 73474830 + processed_pseudogene KNOWN OTTHUMG00000021832.1 268 268 1 ENSG00000269904.2 MAP2K4P1 chrX 73524275 73563085 - transcribed_processed_pseudogene KNOWN OTTHUMG00000021833.1 38811 2539 3 ENSG00000237475.2 RPL7P53 chrX 73535503 73536241 + processed_pseudogene KNOWN OTTHUMG00000021834.2 739 739 1 ENSG00000204116.10 CHIC1 chrX 73563200 73687102 + protein_coding KNOWN OTTHUMG00000021835.5 123903 6939 25 ENSG00000230146.1 SEPHS1P4 chrX 73769248 73770423 + processed_pseudogene KNOWN OTTHUMG00000021836.1 1176 1176 1 ENSG00000270641.1 TSIX chrX 73792205 73829231 + lincRNA KNOWN OTTHUMG00000184725.1 37027 37027 1 ENSG00000229807.8 XIST chrX 73820651 73852753 - lincRNA KNOWN OTTHUMG00000021839.4 32103 19931 33 ENSG00000274655.1 XIST_intron chrX 73821657 73821724 - misc_RNA NOVEL NA 68 68 1 ENSG00000277577.1 Xist_exon4 chrX 73831145 73831270 - misc_RNA NOVEL NA 126 126 1 ENSG00000278039.1 Xist_exon1 chrX 73850487 73850571 + misc_RNA NOVEL NA 85 85 1 ENSG00000138002.13 IFT172 chr2 27444371 27489789 - protein_coding KNOWN OTTHUMG00000128425.4 45419 8401 215 ENSG00000182707.4 FXYD6P3 chrX 73875068 73875635 + processed_pseudogene KNOWN OTTHUMG00000021837.2 568 285 2 ENSG00000225470.5 JPX chrX 73944324 74070408 + lincRNA KNOWN OTTHUMG00000021840.3 126085 4427 46 ENSG00000274430.1 JPX_1 chrX 73944332 73944466 + misc_RNA NOVEL NA 135 135 1 ENSG00000276784.1 JPX_2 chrX 73944595 73944663 + misc_RNA NOVEL NA 69 69 1 ENSG00000228906.1 RP13-216E22.4 chrX 73948973 73949558 + lincRNA NOVEL OTTHUMG00000021838.1 586 451 2 ENSG00000271199.1 RP13-216E22.5 chrX 73958059 73969485 - sense_overlapping NOVEL OTTHUMG00000184200.1 11427 347 2 ENSG00000230590.6 FTX chrX 73963955 74293574 - lincRNA KNOWN OTTHUMG00000021850.3 329620 6132 50 ENSG00000270223.1 RP13-36G14.4 chrX 74009389 74011468 - sense_intronic NOVEL OTTHUMG00000184201.1 2080 905 2 ENSG00000233984.1 RPSAP14 chrX 74031462 74031820 + processed_pseudogene KNOWN OTTHUMG00000021841.2 359 359 1 ENSG00000203397.2 RP13-36G14.3 chrX 74066083 74066592 + processed_pseudogene KNOWN OTTHUMG00000021842.1 510 510 1 ENSG00000235267.1 AC074117.13 chr2 27455156 27455862 + processed_pseudogene KNOWN OTTHUMG00000151938.1 707 397 2 ENSG00000234969.1 RP13-33H18.1 chrX 74069276 74070832 + processed_pseudogene KNOWN OTTHUMG00000021843.1 1557 1182 2 ENSG00000223650.1 UHRF2P1 chrX 74105572 74107958 + processed_pseudogene KNOWN OTTHUMG00000021844.1 2387 2387 1 ENSG00000232928.2 DDX3P1 chrX 74121012 74131923 + processed_pseudogene KNOWN OTTHUMG00000021845.2 10912 1950 2 ENSG00000280375.1 RP13-204A15.5 chrX 74122134 74122725 - TEC KNOWN OTTHUMG00000184202.1 592 592 1 ENSG00000230986.1 DDX3P2 chrX 74133004 74133114 - processed_pseudogene KNOWN OTTHUMG00000040019.1 111 111 1 ENSG00000224430.2 MKRN5P chrX 74161062 74162528 - processed_pseudogene KNOWN OTTHUMG00000021846.2 1467 1467 1 ENSG00000231549.1 USMG5P1 chrX 74173890 74174066 + processed_pseudogene KNOWN OTTHUMG00000021847.2 177 177 1 ENSG00000204113.6 BMP2KL chrX 74185929 74187153 + processed_pseudogene KNOWN OTTHUMG00000021848.3 1225 1225 1 ENSG00000271430.1 RP3-368A4.5 chrX 74200229 74242148 - sense_intronic NOVEL OTTHUMG00000184204.1 41920 3897 2 ENSG00000228492.2 RAB11FIP1P1 chrX 74202834 74204595 + processed_pseudogene KNOWN OTTHUMG00000021849.2 1762 1762 1 ENSG00000200003.1 RNU6-986P chr2 27475494 27475595 - snRNA KNOWN NA 102 102 1 ENSG00000271533.1 RP3-368A4.6 chrX 74209976 74213660 - sense_intronic NOVEL OTTHUMG00000184205.1 3685 3685 1 ENSG00000202566.3 MIR421 chrX 74218373 74218484 - miRNA KNOWN NA 112 112 1 ENSG00000212027.2 MIR374B chrX 74218517 74218628 - miRNA KNOWN NA 112 112 1 ENSG00000265727.2 RN7SL648P chrX 74242608 74242908 - misc_RNA KNOWN NA 301 301 1 ENSG00000278421.1 FTX_1 chrX 74274341 74274411 + misc_RNA NOVEL NA 71 71 1 ENSG00000273974.1 FTX_2 chrX 74280402 74280495 + misc_RNA NOVEL NA 94 94 1 ENSG00000275254.1 FTX_3 chrX 74280936 74281082 + misc_RNA NOVEL NA 147 147 1 ENSG00000275625.1 FTX_4 chrX 74281703 74281849 + misc_RNA NOVEL NA 147 147 1 ENSG00000207820.1 MIR545 chrX 74287104 74287209 - miRNA KNOWN NA 106 106 1 ENSG00000199168.2 MIR374A chrX 74287276 74287386 - miRNA KNOWN NA 111 111 1 ENSG00000115226.8 FNDC4 chr2 27491883 27495245 - protein_coding KNOWN OTTHUMG00000097787.2 3363 1982 17 ENSG00000277922.1 FTX_5 chrX 74293357 74293574 + misc_RNA NOVEL NA 218 218 1 ENSG00000187969.5 ZCCHC13 chrX 74304190 74305031 + protein_coding KNOWN OTTHUMG00000021851.1 842 842 1 ENSG00000226515.1 AC004386.3 chrX 74342713 74342860 - processed_pseudogene KNOWN OTTHUMG00000021852.2 148 148 1 ENSG00000213269.2 AC004386.4 chrX 74376125 74376885 - processed_pseudogene KNOWN OTTHUMG00000021853.1 761 761 1 ENSG00000239745.3 RN7SL790P chrX 74390692 74390989 + misc_RNA KNOWN NA 298 298 1 ENSG00000230665.3 PRKRIRP1 chrX 74396871 74399550 - processed_pseudogene KNOWN OTTHUMG00000021854.2 2680 2203 2 ENSG00000213695.3 RPS7P14 chrX 74409518 74410100 + processed_pseudogene KNOWN OTTHUMG00000021855.1 583 583 1 ENSG00000147100.8 SLC16A2 chrX 74421461 74533917 + protein_coding KNOWN OTTHUMG00000021857.3 112457 4161 10 ENSG00000231206.2 HNRNPA1P25 chrX 74473017 74473953 - processed_pseudogene KNOWN OTTHUMG00000021856.2 937 937 1 ENSG00000230673.3 PABPC1P3 chrX 74583088 74583546 - processed_pseudogene KNOWN OTTHUMG00000021858.1 459 459 1 ENSG00000084734.7 GCKR chr2 27496842 27523684 + protein_coding KNOWN OTTHUMG00000128426.2 26843 3146 55 ENSG00000131263.11 RLIM chrX 74585217 74614617 - protein_coding KNOWN OTTHUMG00000021859.1 29401 8379 9 ENSG00000199885.1 RNU6-330P chrX 74680053 74680159 + snRNA KNOWN NA 107 107 1 ENSG00000050030.12 KIAA2022 chrX 74732849 74925485 - protein_coding KNOWN OTTHUMG00000021860.2 192637 11757 12 ENSG00000271589.1 RP11-130N24.2 chrX 74769639 74769798 + processed_pseudogene KNOWN OTTHUMG00000185043.1 160 160 1 ENSG00000131269.14 ABCB7 chrX 75053172 75156732 - protein_coding KNOWN OTTHUMG00000021862.4 103561 2970 100 ENSG00000229661.1 RP11-145B3.2 chrX 75201491 75201790 + processed_pseudogene KNOWN OTTHUMG00000021861.1 300 300 1 ENSG00000199601.1 RNU6-562P chrX 75202703 75202809 + snRNA KNOWN NA 107 107 1 ENSG00000094841.12 UPRT chrX 75274085 75304600 + protein_coding KNOWN OTTHUMG00000021864.6 30516 2825 49 ENSG00000232186.1 RP11-311P8.2 chrX 75326772 75327999 - processed_pseudogene KNOWN OTTHUMG00000021863.1 1228 1228 1 ENSG00000102383.12 ZDHHC15 chrX 75368427 75523502 - protein_coding KNOWN OTTHUMG00000021866.1 155076 6820 25 ENSG00000233438.1 AC109829.1 chr2 27537386 27567144 + protein_coding PUTATIVE OTTHUMG00000151939.2 29759 825 5 ENSG00000233254.1 RPL21P134 chrX 75384346 75384828 + processed_pseudogene KNOWN OTTHUMG00000021865.1 483 483 1 ENSG00000237089.2 PCNPP4 chrX 75537547 75538702 - processed_pseudogene KNOWN OTTHUMG00000021867.2 1156 517 2 ENSG00000224775.2 BRAFP1 chrX 75582676 75585506 + unprocessed_pseudogene KNOWN OTTHUMG00000021868.2 2831 2703 2 ENSG00000215105.4 TTC3P1 chrX 75740831 75746911 - processed_pseudogene KNOWN OTTHUMG00000021869.1 6081 6081 1 ENSG00000186675.6 MAGEE2 chrX 75782988 75785236 - protein_coding KNOWN OTTHUMG00000021870.1 2249 2249 1 ENSG00000233063.2 SAR1AP4 chrX 75884546 75885136 + processed_pseudogene KNOWN OTTHUMG00000021873.2 591 591 1 ENSG00000226753.1 RP11-212D3.2 chrX 75888700 75888888 + processed_pseudogene KNOWN OTTHUMG00000021874.1 189 189 1 ENSG00000226854.1 RP11-212D3.4 chrX 75903105 75904858 + lincRNA NOVEL OTTHUMG00000021872.1 1754 1234 2 ENSG00000232332.1 RP3-481A17.1 chrX 76029895 76030330 + processed_pseudogene KNOWN OTTHUMG00000021875.2 436 436 1 ENSG00000102390.9 PBDC1 chrX 76172936 76178204 + protein_coding KNOWN OTTHUMG00000021876.2 5269 1201 11 ENSG00000280034.1 AC109829.2 chr2 27556908 27557282 + protein_coding KNOWN NA 375 375 1 ENSG00000237252.1 RP11-322A17.1 chrX 76222637 76223097 + processed_pseudogene KNOWN OTTHUMG00000021878.1 461 461 1 ENSG00000201826.1 RNU6-867P chrX 76244968 76245074 + snRNA KNOWN NA 107 107 1 ENSG00000274398.1 RP11-322A17.3 chrX 76250183 76251796 - processed_pseudogene KNOWN OTTHUMG00000188107.1 1614 1614 1 ENSG00000213684.4 LDHBP2 chrX 76334841 76335845 - processed_pseudogene KNOWN OTTHUMG00000021877.3 1005 1005 1 ENSG00000198934.4 MAGEE1 chrX 76427724 76431353 + protein_coding KNOWN OTTHUMG00000021879.2 3630 3630 1 ENSG00000223259.1 RNA5SP508 chrX 76655009 76655127 - rRNA KNOWN NA 119 119 1 ENSG00000235447.2 TRAPPC13P1 chrX 76655498 76656559 - processed_pseudogene KNOWN OTTHUMG00000021880.4 1062 1062 1 ENSG00000280870.1 MIR325HG chrX 76657798 77014532 - lincRNA KNOWN OTTHUMG00000189737.1 356735 1826 28 ENSG00000207995.1 MIR325 chrX 77005404 77005501 - miRNA KNOWN NA 98 98 1 ENSG00000201447.1 RNA5SP509 chrX 77066709 77066827 + rRNA KNOWN NA 119 119 1 ENSG00000221843.3 C2orf16 chr2 27576522 27582720 + protein_coding KNOWN OTTHUMG00000159099.1 6199 6199 1 ENSG00000234404.2 BX682235.1 chrX 77374212 77381319 + processed_pseudogene KNOWN OTTHUMG00000013135.3 7108 570 2 ENSG00000196468.7 FGF16 chrX 77447405 77457278 + protein_coding KNOWN OTTHUMG00000013133.2 9874 1650 3 ENSG00000085224.19 ATRX chrX 77504878 77786269 - protein_coding KNOWN OTTHUMG00000022686.8 281392 19060 199 ENSG00000237106.2 FABP5P15 chrX 77727867 77728080 + processed_pseudogene KNOWN OTTHUMG00000021881.2 214 214 1 ENSG00000102158.18 MAGT1 chrX 77826364 77895593 - protein_coding KNOWN OTTHUMG00000021882.4 69230 4862 39 ENSG00000200906.1 RNU6-854P chrX 77837289 77837395 + snRNA KNOWN NA 107 107 1 ENSG00000263410.2 RN7SL460P chrX 77885377 77885634 + misc_RNA KNOWN NA 258 258 1 ENSG00000131174.4 COX7B chrX 77899438 77907373 + protein_coding KNOWN OTTHUMG00000022718.1 7936 3024 9 ENSG00000165240.16 ATP7A chrX 77910656 78050395 + protein_coding KNOWN OTTHUMG00000021885.2 139740 8529 69 ENSG00000248503.2 RP5-1000K24.2 chrX 77910741 77964890 + transcribed_processed_pseudogene KNOWN OTTHUMG00000021883.2 54150 2433 3 ENSG00000272426.1 RP11-108M9.6 chr1 16904339 16904776 - lincRNA NOVEL OTTHUMG00000185683.1 438 438 1 ENSG00000221531.1 AC074091.1 chr2 27581889 27581946 - miRNA NOVEL NA 58 58 1 ENSG00000226784.2 PGAM4 chrX 77968874 77969638 - protein_coding KNOWN OTTHUMG00000057865.2 765 765 1 ENSG00000102144.12 PGK1 chrX 78065188 78129296 + protein_coding KNOWN OTTHUMG00000021888.1 64109 5415 26 ENSG00000187325.4 TAF9B chrX 78129748 78139706 - protein_coding KNOWN OTTHUMG00000021887.1 9959 2791 13 ENSG00000223592.2 FNDC3CP chrX 78165696 78172422 - unitary_pseudogene KNOWN OTTHUMG00000021886.2 6727 1155 11 ENSG00000173198.5 CYSLTR1 chrX 78271464 78327691 - protein_coding KNOWN OTTHUMG00000021889.1 56228 5571 7 ENSG00000224755.1 HMGN1P34 chrX 78519593 78520186 - processed_pseudogene KNOWN OTTHUMG00000021890.1 594 290 2 ENSG00000235061.3 UBE2V1P7 chrX 78554412 78554751 - processed_pseudogene KNOWN OTTHUMG00000021891.3 340 340 1 ENSG00000179300.3 ZCCHC5 chrX 78656069 78659328 - protein_coding KNOWN OTTHUMG00000021892.1 3260 2648 2 ENSG00000271433.1 PPATP2 chrX 78699384 78699891 - processed_pseudogene KNOWN OTTHUMG00000185044.1 508 508 1 ENSG00000147145.11 LPAR4 chrX 78747709 78757094 + protein_coding KNOWN OTTHUMG00000021895.2 9386 3113 21 ENSG00000243943.8 ZNF512 chr2 27582969 27623215 + protein_coding KNOWN OTTHUMG00000097786.5 40247 4398 78 ENSG00000227645.2 RPL7P54 chrX 78763226 78763899 + processed_pseudogene KNOWN OTTHUMG00000021894.2 674 674 1 ENSG00000078589.11 P2RY10 chrX 78945332 78961954 + protein_coding KNOWN OTTHUMG00000021896.1 16623 1803 11 ENSG00000232168.2 RP11-180D15.1 chrX 79084936 79085848 + processed_pseudogene KNOWN OTTHUMG00000021897.2 913 913 1 ENSG00000280897.1 AL590222.1 chrX 79158031 79158119 + miRNA NOVEL NA 89 89 1 ENSG00000147138.1 GPR174 chrX 79170972 79172229 + protein_coding KNOWN OTTHUMG00000021898.1 1258 1258 1 ENSG00000271005.1 CTHRC1P1 chrX 79177200 79177668 - processed_pseudogene KNOWN OTTHUMG00000185045.1 469 469 1 ENSG00000225025.2 KIF4CP chrX 79323446 79325217 + processed_pseudogene KNOWN OTTHUMG00000021899.2 1772 1279 3 ENSG00000078596.9 ITM2A chrX 79360384 79367667 - protein_coding KNOWN OTTHUMG00000021900.1 7284 2051 24 ENSG00000270268.1 RP1-164L12.1 chrX 79369364 79370165 - processed_pseudogene KNOWN OTTHUMG00000185068.1 802 802 1 ENSG00000122145.13 TBX22 chrX 80014756 80031769 + protein_coding KNOWN OTTHUMG00000021901.2 17014 2654 35 ENSG00000259080.1 RP11-158I13.2 chr2 27583046 27635174 + processed_transcript NOVEL OTTHUMG00000171804.1 52129 1741 18 ENSG00000281700.1 TBX22 chrX 80024067 80031111 + protein_coding KNOWN NA 7045 1203 6 ENSG00000266822.2 AL049791.1 chrX 80101220 80101308 - miRNA NOVEL NA 89 89 1 ENSG00000278530.3 CHMP1B2P chrX 80228489 80335364 - unitary_pseudogene KNOWN OTTHUMG00000021903.3 106876 7046 14 ENSG00000174016.10 FAM46D chrX 80335504 80445311 + protein_coding KNOWN OTTHUMG00000021902.1 109808 3204 8 ENSG00000230247.2 HNRNPH3P1 chrX 80529037 80530027 + processed_pseudogene KNOWN OTTHUMG00000021904.2 991 583 2 ENSG00000228051.1 RP11-325E14.2 chrX 80560146 80562054 + processed_pseudogene KNOWN OTTHUMG00000021905.1 1909 1909 1 ENSG00000228612.2 HK2P1 chrX 80571871 80574607 - processed_pseudogene KNOWN OTTHUMG00000021906.2 2737 2737 1 ENSG00000165288.10 BRWD3 chrX 80670854 80809688 - protein_coding KNOWN OTTHUMG00000021908.3 138835 12694 78 ENSG00000225715.1 RP11-325E14.5 chrX 80709928 80710705 + processed_pseudogene KNOWN OTTHUMG00000021907.1 778 778 1 ENSG00000239008.1 ACA64 chrX 80857076 80857202 - snoRNA NOVEL NA 127 127 1 ENSG00000176714.9 CCDC121 chr2 27625639 27629012 - protein_coding KNOWN OTTHUMG00000128427.3 3374 2844 6 ENSG00000212623.1 RNU6-493P chrX 80900757 80900864 + snRNA KNOWN NA 108 108 1 ENSG00000073905.8 VDAC1P1 chrX 80929500 80930347 + processed_pseudogene KNOWN OTTHUMG00000021909.2 848 848 1 ENSG00000212546.1 RNU6-995P chrX 80936434 80936540 + snRNA KNOWN NA 107 107 1 ENSG00000198157.9 HMGN5 chrX 81113701 81201942 - protein_coding KNOWN OTTHUMG00000021911.1 88242 2416 44 ENSG00000131171.11 SH3BGRL chrX 81201943 81298547 + protein_coding KNOWN OTTHUMG00000021910.1 96605 2304 17 ENSG00000264374.1 AL357115.1 chrX 81240820 81240901 + miRNA NOVEL NA 82 82 1 ENSG00000231875.1 RP11-346E8.1 chrX 81363268 81364170 + processed_pseudogene KNOWN OTTHUMG00000021912.1 903 903 1 ENSG00000224523.1 RP13-52K8.1 chrX 81408938 81427276 + unprocessed_pseudogene KNOWN OTTHUMG00000021913.1 18339 747 5 ENSG00000233446.2 XXyac-YR12DB5.1 chrX 81600072 81601306 + processed_pseudogene KNOWN OTTHUMG00000021914.2 1235 1235 1 ENSG00000206826.1 RNU6-974P chrX 82001220 82001327 - snRNA KNOWN NA 108 108 1 ENSG00000198522.12 GPN1 chr2 27628247 27651508 + protein_coding KNOWN OTTHUMG00000097784.5 23262 3746 132 ENSG00000228041.2 RP4-581F12.1 chrX 82497669 82497924 - processed_pseudogene KNOWN OTTHUMG00000021915.2 256 256 1 ENSG00000213653.4 RPL22P22 chrX 82506434 82506812 - processed_pseudogene KNOWN OTTHUMG00000021916.3 379 379 1 ENSG00000202183.1 SNORA4 chrX 82561201 82561347 + snoRNA NOVEL NA 147 147 1 ENSG00000275182.1 AL022574.1 chrX 82675638 82675727 - miRNA NOVEL NA 90 90 1 ENSG00000236365.1 RP5-849L7.1 chrX 82875649 82875885 + processed_pseudogene KNOWN OTTHUMG00000021917.1 237 237 1 ENSG00000232735.2 ATG4AP1 chrX 82998699 82999236 + processed_pseudogene KNOWN OTTHUMG00000021918.2 538 538 1 ENSG00000279437.1 RP3-326L13.2 chrX 83506023 83509214 - TEC KNOWN OTTHUMG00000185373.2 3192 3192 1 ENSG00000196767.6 POU3F4 chrX 83508250 83512127 + protein_coding KNOWN OTTHUMG00000021919.4 3878 3878 1 ENSG00000236870.2 RP1-223D17.1 chrX 83559896 83560312 - processed_pseudogene KNOWN OTTHUMG00000021920.2 417 417 1 ENSG00000215102.2 TERF1P4 chrX 83748825 83749939 - processed_pseudogene KNOWN OTTHUMG00000021921.1 1115 1115 1 ENSG00000206731.1 SNORA36 chr2 27642043 27642169 - snoRNA NOVEL NA 127 127 1 ENSG00000183035.11 CYLC1 chrX 83861126 83886699 + protein_coding KNOWN OTTHUMG00000021922.1 25574 2128 9 ENSG00000072133.9 RPS6KA6 chrX 84058346 84187907 - protein_coding KNOWN OTTHUMG00000021923.1 129562 8502 56 ENSG00000221494.1 MIR548I4 chrX 84225752 84225828 - miRNA KNOWN NA 77 77 1 ENSG00000165259.12 HDX chrX 84317874 84502479 - protein_coding KNOWN OTTHUMG00000021926.4 184606 7258 38 ENSG00000233484.2 RP11-74B21.1 chrX 84403898 84404024 - transcribed_processed_pseudogene KNOWN OTTHUMG00000021925.2 127 127 1 ENSG00000237211.2 SETP4 chrX 84755136 84756003 + processed_pseudogene KNOWN OTTHUMG00000021927.3 868 868 1 ENSG00000229547.4 UBE2DNL chrX 84934151 84934890 + transcribed_processed_pseudogene KNOWN OTTHUMG00000021928.4 740 740 6 ENSG00000230781.1 RP1-215K18.4 chrX 84973217 84977829 + unitary_pseudogene KNOWN OTTHUMG00000154699.2 4613 1499 3 ENSG00000155008.12 APOOL chrX 85003826 85093316 + protein_coding KNOWN OTTHUMG00000021930.2 89491 6548 29 ENSG00000184788.11 SATL1 chrX 85092287 85109048 - protein_coding KNOWN OTTHUMG00000021931.2 16762 2272 11 ENSG00000119760.14 SUPT7L chr2 27650812 27663840 - protein_coding KNOWN OTTHUMG00000151947.2 13029 5309 27 ENSG00000276391.1 RP5-928E24.4 chrX 85207187 85210649 + processed_pseudogene KNOWN OTTHUMG00000188093.1 3463 831 3 ENSG00000235461.1 RP5-928E24.2 chrX 85210706 85219698 + lincRNA NOVEL OTTHUMG00000021932.1 8993 1135 4 ENSG00000147180.15 ZNF711 chrX 85244032 85273362 + protein_coding KNOWN OTTHUMG00000021933.3 29331 5004 29 ENSG00000264517.1 AC003001.1 chrX 85244095 85244171 + miRNA NOVEL NA 77 77 1 ENSG00000124429.16 POF1B chrX 85277396 85379743 - protein_coding KNOWN OTTHUMG00000021934.4 102348 4029 33 ENSG00000223707.2 RP1-93L7.3 chrX 85849410 85850139 - processed_pseudogene KNOWN OTTHUMG00000021935.2 730 730 1 ENSG00000276892.1 RP1-93L7.4 chrX 85851575 85851682 - processed_pseudogene KNOWN OTTHUMG00000188095.1 108 108 1 ENSG00000188419.12 CHM chrX 85861180 86047562 - protein_coding KNOWN OTTHUMG00000021937.6 186383 8645 27 ENSG00000199051.2 MIR361 chrX 85903611 85903722 - miRNA KNOWN NA 112 112 1 ENSG00000199567.1 Y_RNA chrX 86019608 86019715 + misc_RNA NOVEL NA 108 108 1 ENSG00000163798.12 SLC4A1AP chr2 27663471 27694976 + protein_coding KNOWN OTTHUMG00000151944.3 31506 5207 58 ENSG00000234039.2 NDUFA5P7 chrX 86066227 86066468 - processed_pseudogene KNOWN OTTHUMG00000021938.2 242 242 1 ENSG00000225536.2 STIP1P3 chrX 86084716 86086339 - processed_pseudogene KNOWN OTTHUMG00000021939.2 1624 1624 1 ENSG00000223574.1 TPMTP4 chrX 86128893 86129570 - processed_pseudogene KNOWN OTTHUMG00000021940.1 678 678 1 ENSG00000126733.19 DACH2 chrX 86148458 86832604 + protein_coding KNOWN OTTHUMG00000021944.3 684147 7039 90 ENSG00000215093.3 EEF1A1P29 chrX 86160264 86161359 - processed_pseudogene KNOWN OTTHUMG00000021941.1 1096 1096 1 ENSG00000223772.1 GEMIN8P3 chrX 86304367 86305086 + processed_pseudogene KNOWN OTTHUMG00000021942.1 720 720 1 ENSG00000277717.1 U6 chrX 86481028 86481130 + snRNA NOVEL NA 103 103 1 ENSG00000231478.1 FCF1P9 chrX 86481532 86481813 + transcribed_processed_pseudogene KNOWN OTTHUMG00000021943.1 282 282 1 ENSG00000271290.1 RP11-345E19.2 chrX 86798598 86799226 - processed_pseudogene KNOWN OTTHUMG00000185002.1 629 629 1 ENSG00000236190.1 RP3-431C21.1 chrX 86888586 86888816 + processed_pseudogene KNOWN OTTHUMG00000021945.1 231 231 1 ENSG00000205334.2 LINC01460 chr2 27705786 27715732 - lincRNA NOVEL OTTHUMG00000151945.1 9947 2860 2 ENSG00000271457.1 RP11-192B18.1 chrX 87143854 87144748 - processed_pseudogene KNOWN OTTHUMG00000185039.1 895 542 2 ENSG00000200422.1 SNORD45 chrX 87146733 87146804 + snoRNA NOVEL NA 72 72 1 ENSG00000230478.1 RP1-52D1.1 chrX 87425583 87425690 - processed_pseudogene KNOWN OTTHUMG00000040021.1 108 108 1 ENSG00000102271.12 KLHL4 chrX 87517749 87670050 + protein_coding KNOWN OTTHUMG00000021946.1 152302 5818 22 ENSG00000237506.3 RPSAP15 chrX 87703343 87704203 - processed_pseudogene KNOWN OTTHUMG00000021947.1 861 861 1 ENSG00000271205.1 RP1-138A5.2 chrX 87723089 87723238 - processed_pseudogene KNOWN OTTHUMG00000185003.1 150 150 1 ENSG00000270446.1 RP6-43L17.1 chrX 87806433 87806769 - processed_pseudogene KNOWN OTTHUMG00000185047.1 337 337 1 ENSG00000271056.1 RP6-43L17.2 chrX 87807549 87809883 - processed_pseudogene KNOWN OTTHUMG00000185048.1 2335 851 2 ENSG00000230706.2 RP5-998G20.1 chrX 88061590 88062844 - processed_pseudogene KNOWN OTTHUMG00000021948.2 1255 1255 1 ENSG00000230956.2 RP3-452M16.1 chrX 88096393 88097225 - processed_pseudogene KNOWN OTTHUMG00000021949.2 833 833 1 ENSG00000243147.6 MRPL33 chr2 27771717 27988087 + protein_coding KNOWN OTTHUMG00000097795.2 216371 1539 22 ENSG00000252016.1 ACA64 chrX 88148792 88148918 + snoRNA NOVEL NA 127 127 1 ENSG00000271693.1 CTD-2194M22.1 chrX 88369343 88369459 + processed_pseudogene KNOWN OTTHUMG00000185070.1 117 117 1 ENSG00000147183.8 CPXCR1 chrX 88747225 88754785 + protein_coding KNOWN OTTHUMG00000021950.1 7561 1630 8 ENSG00000271157.1 RP1-249C1.1 chrX 88827554 88829858 - processed_pseudogene KNOWN OTTHUMG00000185080.1 2305 785 2 ENSG00000232576.2 RP11-137D19.1 chrX 88908403 88908763 + processed_pseudogene KNOWN OTTHUMG00000021951.2 361 361 1 ENSG00000270745.1 RP13-324D24.1 chrX 88982215 88982353 - processed_pseudogene KNOWN OTTHUMG00000185072.1 139 139 1 ENSG00000224065.2 SRIP2 chrX 89367435 89367600 - processed_pseudogene KNOWN OTTHUMG00000021952.2 166 166 1 ENSG00000225012.4 RP13-348B13.2 chrX 89423738 89446983 + lincRNA NOVEL OTTHUMG00000021953.1 23246 469 5 ENSG00000221005.1 AL161723.1 chrX 89790335 89790451 + miRNA NOVEL NA 117 117 1 ENSG00000153779.9 TGIF2LX chrX 89921882 89922883 + protein_coding KNOWN OTTHUMG00000021954.3 1002 1002 6 ENSG00000117122.12 MFAP2 chr1 16974502 16980835 - protein_coding KNOWN OTTHUMG00000002290.1 6334 2915 38 ENSG00000171174.12 RBKS chr2 27781364 27891098 - protein_coding KNOWN OTTHUMG00000097833.2 109735 3625 26 ENSG00000227581.2 RP13-140E4.1 chrX 90039213 90039834 - processed_pseudogene KNOWN OTTHUMG00000021955.2 622 622 1 ENSG00000226081.2 USP12PX chrX 90112650 90113706 + processed_pseudogene KNOWN OTTHUMG00000021956.2 1057 1057 1 ENSG00000274022.1 RP13-362E11.3 chrX 90208895 90209418 - processed_pseudogene KNOWN OTTHUMG00000188108.1 524 524 1 ENSG00000227434.2 RNF19BPX chrX 90209796 90210420 - processed_pseudogene KNOWN OTTHUMG00000040023.2 625 625 1 ENSG00000229667.2 UBE2V1P9 chrX 90289536 90289903 - processed_pseudogene KNOWN OTTHUMG00000021957.2 368 368 1 ENSG00000207515.1 RNU6-555P chrX 90597235 90597340 - snRNA KNOWN NA 106 106 1 ENSG00000206062.4 RP13-212L9.1 chrX 91307781 91308878 + lincRNA NOVEL OTTHUMG00000021958.1 1098 741 2 ENSG00000234161.1 PABPC5-AS1 chrX 91414878 91434999 - antisense NOVEL OTTHUMG00000021960.1 20122 426 4 ENSG00000236413.2 RP13-24G8.2 chrX 91422309 91422538 + processed_pseudogene KNOWN OTTHUMG00000021961.2 230 230 1 ENSG00000174740.7 PABPC5 chrX 91434595 91438584 + protein_coding KNOWN OTTHUMG00000021959.1 3990 3450 4 ENSG00000158019.19 BRE chr2 27889941 28338901 + protein_coding KNOWN OTTHUMG00000097831.3 448961 3392 91 ENSG00000230275.2 SERBP1P4 chrX 91560436 91561597 - processed_pseudogene KNOWN OTTHUMG00000021962.2 1162 1162 1 ENSG00000102290.20 PCDH11X chrX 91779261 92623230 + protein_coding KNOWN OTTHUMG00000021965.8 843970 11645 50 ENSG00000222440.1 RNU2-26P chrX 91798093 91798283 + snRNA KNOWN NA 191 191 1 ENSG00000234702.1 VDAC1P3 chrX 91982655 91983505 - processed_pseudogene KNOWN OTTHUMG00000021963.1 851 851 1 ENSG00000229132.2 EIF4A1P10 chrX 92113246 92114461 - processed_pseudogene KNOWN OTTHUMG00000021964.3 1216 1216 1 ENSG00000215089.3 KRT18P11 chrX 92459670 92460952 + processed_pseudogene KNOWN OTTHUMG00000021966.1 1283 1283 1 ENSG00000211526.1 AL121869.1 chrX 92460452 92460545 + miRNA NOVEL NA 94 94 1 ENSG00000230543.1 SNX3P1X chrX 92515323 92515497 - processed_pseudogene KNOWN OTTHUMG00000021967.1 175 175 1 ENSG00000225912.1 RP13-258O15.1 chrX 92676519 92676954 - processed_pseudogene KNOWN OTTHUMG00000021968.1 436 436 1 ENSG00000237873.1 RP11-156J23.1 chrX 93042490 93042942 + processed_pseudogene KNOWN OTTHUMG00000021969.1 453 453 1 ENSG00000270846.1 RP11-674I16.1 chr2 27896116 27897195 - processed_pseudogene KNOWN OTTHUMG00000184441.1 1080 1080 1 ENSG00000234130.2 RP13-88F20.1 chrX 93222220 93225015 - processed_pseudogene KNOWN OTTHUMG00000021970.2 2796 2796 1 ENSG00000234322.1 ST13P18 chrX 93287733 93288759 - processed_pseudogene KNOWN OTTHUMG00000021971.1 1027 1027 1 ENSG00000237381.2 RP3-455H14.1 chrX 93388075 93389497 - processed_pseudogene KNOWN OTTHUMG00000021972.2 1423 1423 1 ENSG00000228301.1 RPL7P55 chrX 93573834 93574579 + processed_pseudogene KNOWN OTTHUMG00000021973.1 746 746 1 ENSG00000186310.9 NAP1L3 chrX 93670930 93673568 - protein_coding KNOWN OTTHUMG00000021974.2 2639 2639 3 ENSG00000179083.6 FAM133A chrX 93674013 93712274 + protein_coding KNOWN OTTHUMG00000021975.2 38262 3381 7 ENSG00000270826.1 RP1-60G11.1 chrX 93776911 93777384 - processed_pseudogene KNOWN OTTHUMG00000185075.1 474 474 1 ENSG00000212495.1 RNU6-332P chrX 94003815 94003922 - snRNA KNOWN NA 108 108 1 ENSG00000202410.1 Y_RNA chrX 94178005 94178106 + misc_RNA NOVEL NA 102 102 1 ENSG00000227521.2 RP13-213K19.1 chrX 94319038 94320025 + processed_pseudogene KNOWN OTTHUMG00000021976.2 988 988 1 ENSG00000265321.1 MIR4263 chr2 27996367 27996449 + miRNA KNOWN NA 83 83 1 ENSG00000232293.2 PAICSP7 chrX 94636663 94639570 - processed_pseudogene KNOWN OTTHUMG00000021977.2 2908 962 2 ENSG00000231001.2 CCNB1IP1P3 chrX 94776739 94777567 - processed_pseudogene KNOWN OTTHUMG00000021978.2 829 829 1 ENSG00000221665.1 AL591708.1 chrX 94893501 94893593 + miRNA NOVEL NA 93 93 1 ENSG00000221187.1 MIR548M chrX 95063141 95063226 - miRNA KNOWN NA 86 86 1 ENSG00000212098.1 AL390966.1 chrX 95134279 95134372 + miRNA NOVEL NA 94 94 1 ENSG00000271094.1 RP3-380C13.2 chrX 95453369 95453581 + processed_pseudogene KNOWN OTTHUMG00000185056.1 213 213 1 ENSG00000223467.2 CALM1P1 chrX 95499604 95500036 + processed_pseudogene KNOWN OTTHUMG00000021979.2 433 433 1 ENSG00000201567.1 RNA5SP510 chrX 95582064 95582162 + rRNA KNOWN NA 99 99 1 ENSG00000215085.4 RP11-471G13.2 chrX 95584303 95584942 + processed_pseudogene KNOWN OTTHUMG00000021981.2 640 640 1 ENSG00000236185.1 HNRNPDLP3 chrX 95610578 95610957 + processed_pseudogene KNOWN OTTHUMG00000154905.1 380 380 1 ENSG00000270528.1 RP11-674I16.2 chr2 28015777 28016482 - processed_pseudogene KNOWN OTTHUMG00000184443.1 706 706 1 ENSG00000226307.1 HNRNPDLP1 chrX 95638375 95638924 + processed_pseudogene KNOWN OTTHUMG00000021982.1 550 550 1 ENSG00000235425.2 RPS7P13 chrX 95679130 95679627 - processed_pseudogene KNOWN OTTHUMG00000021980.2 498 498 1 ENSG00000270583.1 RP11-471G13.5 chrX 95720243 95721144 + processed_pseudogene KNOWN OTTHUMG00000185060.1 902 902 1 ENSG00000232842.2 RP5-961K14.1 chrX 95973328 95974315 - processed_pseudogene KNOWN OTTHUMG00000021983.2 988 988 1 ENSG00000242998.3 RN7SL379P chrX 96023360 96023652 + misc_RNA KNOWN NA 293 293 1 ENSG00000203262.3 RP5-961K14.2 chrX 96070669 96071778 - processed_pseudogene KNOWN OTTHUMG00000021984.2 1110 1110 1 ENSG00000232069.1 RPS29P28 chrX 96195477 96195617 + processed_pseudogene KNOWN OTTHUMG00000021985.1 141 141 1 ENSG00000271209.1 BRDTP1 chrX 96337236 96337912 - processed_pseudogene KNOWN OTTHUMG00000185081.1 677 677 1 ENSG00000223260.1 RN7SKP194 chrX 96410432 96410782 - misc_RNA KNOWN NA 351 351 1 ENSG00000229693.2 RP11-25C15.1 chrX 96620654 96621903 + processed_pseudogene KNOWN OTTHUMG00000021986.2 1250 1250 1 ENSG00000277035.1 uc_338 chr2 28134408 28134585 - misc_RNA NOVEL NA 178 178 1 ENSG00000147202.16 DIAPH2 chrX 96684663 97604997 + protein_coding KNOWN OTTHUMG00000022689.2 920335 9550 136 ENSG00000207426.1 Y_RNA chrX 96701507 96701619 - misc_RNA NOVEL NA 113 113 1 ENSG00000204086.4 RPA4 chrX 96883908 96885467 + protein_coding KNOWN OTTHUMG00000021987.1 1560 1560 1 ENSG00000214628.3 RP11-392M9.2 chrX 96953630 96954195 - processed_pseudogene KNOWN OTTHUMG00000021988.2 566 566 1 ENSG00000277900.1 Metazoa_SRP chrX 97081674 97081956 + misc_RNA NOVEL NA 283 283 1 ENSG00000265260.2 RN7SL74P chrX 97341046 97341344 + misc_RNA KNOWN NA 299 299 1 ENSG00000236256.8 DIAPH2-AS1 chrX 97431286 97642589 - antisense NOVEL OTTHUMG00000021989.3 211304 2309 15 ENSG00000233887.1 ERVWE2 chrX 97847263 97849017 + processed_pseudogene KNOWN OTTHUMG00000021991.2 1755 1755 1 ENSG00000237752.2 RP13-75G22.1 chrX 97906644 97908090 + processed_pseudogene KNOWN OTTHUMG00000021990.2 1447 1447 1 ENSG00000234889.2 RP13-130D24.1 chrX 97975878 97978641 - processed_pseudogene KNOWN OTTHUMG00000021992.2 2764 2764 1 ENSG00000223522.1 AC093690.1 chr2 28307691 28310459 - antisense NOVEL OTTHUMG00000151943.2 2769 2110 3 ENSG00000236243.2 RPL6P29 chrX 98251679 98252543 + processed_pseudogene KNOWN OTTHUMG00000021993.2 865 865 1 ENSG00000271322.1 RP11-390F10.3 chrX 98348451 98348748 - processed_pseudogene KNOWN OTTHUMG00000185086.1 298 298 1 ENSG00000213704.3 EEF1A1P15 chrX 98389512 98390919 + processed_pseudogene KNOWN OTTHUMG00000021994.2 1408 1408 1 ENSG00000226837.2 HMGB1P32 chrX 98422138 98422809 + processed_pseudogene KNOWN OTTHUMG00000021995.2 672 565 2 ENSG00000281566.1 RP11-485F13.1 chrX 98573859 98864984 + lincRNA NOVEL OTTHUMG00000189756.1 291126 729 10 ENSG00000252430.1 AL109750.1 chrX 99385195 99385276 - miRNA NOVEL NA 82 82 1 ENSG00000270308.1 RP3-377O6.2 chrX 99656997 99657381 + processed_pseudogene KNOWN OTTHUMG00000185073.2 385 385 1 ENSG00000215070.4 XRCC6P5 chrX 99719364 99721158 - processed_pseudogene KNOWN OTTHUMG00000021996.2 1795 1795 1 ENSG00000229946.2 B3GNT2P1 chrX 99886740 99887691 - processed_pseudogene KNOWN OTTHUMG00000021997.2 952 952 1 ENSG00000252296.2 SNORA25 chrX 100100084 100100172 + snoRNA NOVEL NA 89 89 1 ENSG00000225991.1 RP11-731I19.1 chr2 28308161 28308570 + processed_pseudogene KNOWN OTTHUMG00000157055.1 410 410 1 ENSG00000236988.2 RP11-402K9.1 chrX 100149783 100151340 - processed_pseudogene KNOWN OTTHUMG00000021998.2 1558 1558 1 ENSG00000230592.2 RPSAP8 chrX 100155885 100156773 - processed_pseudogene KNOWN OTTHUMG00000021999.2 889 889 1 ENSG00000275864.1 AL355593.1 chrX 100249212 100249313 - miRNA NOVEL NA 102 102 1 ENSG00000165194.13 PCDH19 chrX 100291644 100410273 - protein_coding KNOWN OTTHUMG00000022000.4 118630 9756 18 ENSG00000000005.5 TNMD chrX 100584802 100599885 + protein_coding KNOWN OTTHUMG00000022001.1 15084 1610 10 ENSG00000000003.13 TSPAN6 chrX 100627109 100639991 - protein_coding KNOWN OTTHUMG00000022002.1 12883 4535 34 ENSG00000102359.5 SRPX2 chrX 100644218 100671299 + protein_coding KNOWN OTTHUMG00000022003.1 27082 2368 14 ENSG00000261295.1 RP11-524D16__A.3 chrX 100673330 100673981 + antisense NOVEL OTTHUMG00000175567.1 652 652 1 ENSG00000102362.14 SYTL4 chrX 100674491 100732123 - protein_coding KNOWN OTTHUMG00000022004.1 57633 7428 67 ENSG00000223819.2 RP3-347M6.1 chrX 100800303 100800784 - processed_pseudogene KNOWN OTTHUMG00000022005.2 482 482 1 ENSG00000229951.4 FLJ31356 chr2 28384409 28394672 - antisense NOVEL OTTHUMG00000151946.1 10264 3001 5 ENSG00000238116.2 RP3-347M6.2 chrX 100801188 100803060 + processed_pseudogene KNOWN OTTHUMG00000022006.2 1873 1873 1 ENSG00000275320.1 RP3-347M6.3 chrX 100815865 100817174 - processed_pseudogene KNOWN OTTHUMG00000188090.1 1310 572 4 ENSG00000101811.12 CSTF2 chrX 100820359 100840932 + protein_coding KNOWN OTTHUMG00000022709.3 20574 2187 49 ENSG00000202231.1 SNORA9 chrX 100822620 100822752 - snoRNA NOVEL NA 133 133 1 ENSG00000007952.16 NOX1 chrX 100843324 100874345 - protein_coding KNOWN OTTHUMG00000022007.1 31022 2529 47 ENSG00000239345.2 HNRNPA1P26 chrX 100855288 100856379 - processed_pseudogene KNOWN OTTHUMG00000022008.3 1092 1092 1 ENSG00000233680.4 HNRNPA1P27 chrX 100887636 100888590 - processed_pseudogene KNOWN OTTHUMG00000022009.2 955 955 1 ENSG00000275220.1 Z83819.1 chrX 100890396 100890487 + miRNA NOVEL NA 92 92 1 ENSG00000179031.8 LL0XNC01-131B10.2 chrX 100910712 100911489 + processed_pseudogene KNOWN OTTHUMG00000022011.2 778 778 1 ENSG00000182489.8 XKRX chrX 100913445 100929433 - protein_coding KNOWN OTTHUMG00000022010.3 15989 3372 5 ENSG00000075426.10 FOSL2 chr2 28392448 28417312 + protein_coding KNOWN OTTHUMG00000097832.5 24865 7157 15 ENSG00000182574.8 RP3-341D10.1 chrX 100956593 100957538 + processed_pseudogene KNOWN OTTHUMG00000022012.2 946 946 1 ENSG00000174225.13 ARL13A chrX 100969708 100990829 + protein_coding KNOWN OTTHUMG00000022013.4 21122 1535 26 ENSG00000188917.13 TRMT2B chrX 101009346 101052116 - protein_coding KNOWN OTTHUMG00000022017.4 42771 4055 64 ENSG00000225839.2 TRMT2B-AS1 chrX 101043564 101094476 - sense_overlapping NOVEL OTTHUMG00000022015.2 50913 205 2 ENSG00000126950.7 TMEM35 chrX 101078720 101096364 + protein_coding KNOWN OTTHUMG00000022016.1 17645 2571 4 ENSG00000102384.12 CENPI chrX 101098218 101163681 + protein_coding KNOWN OTTHUMG00000022018.1 65464 4321 64 ENSG00000231643.4 GHc-210E9.2 chrX 101191115 101191409 - processed_pseudogene KNOWN OTTHUMG00000022019.2 295 295 1 ENSG00000102385.11 DRP2 chrX 101219769 101264497 + protein_coding KNOWN OTTHUMG00000022020.3 44729 8187 108 ENSG00000102387.14 TAF7L chrX 101268253 101293057 - protein_coding KNOWN OTTHUMG00000022021.2 24805 2714 37 ENSG00000202024.1 RNU6-934P chrX 101325404 101325510 + snRNA KNOWN NA 107 107 1 ENSG00000226526.1 RP1-37C10.3 chr1 16978926 17005091 + antisense NOVEL OTTHUMG00000002292.1 26166 636 2 ENSG00000270640.1 RP11-373D23.2 chr2 28396815 28397110 + sense_intronic NOVEL OTTHUMG00000185291.1 296 296 1 ENSG00000270813.2 NANOGNBP3 chrX 101337725 101338289 - processed_pseudogene KNOWN OTTHUMG00000185071.2 565 565 1 ENSG00000183911.7 RPL21P132 chrX 101339917 101340934 + processed_pseudogene KNOWN OTTHUMG00000022023.1 1018 462 3 ENSG00000126953.5 TIMM8A chrX 101345661 101349196 - protein_coding KNOWN OTTHUMG00000022028.1 3536 2629 4 ENSG00000010671.14 BTK chrX 101349447 101390796 - protein_coding KNOWN OTTHUMG00000022022.2 41350 4575 88 ENSG00000241343.8 RPL36A chrX 101390824 101396154 + protein_coding KNOWN OTTHUMG00000022027.7 5331 3964 41 ENSG00000257529.4 RPL36A-HNRNPH2 chrX 101391011 101412297 + protein_coding KNOWN OTTHUMG00000170052.2 21287 695 9 ENSG00000102393.8 GLA chrX 101397803 101407925 - protein_coding KNOWN OTTHUMG00000022026.2 10123 2065 32 ENSG00000126945.8 HNRNPH2 chrX 101408295 101414133 + protein_coding KNOWN OTTHUMG00000022029.1 5839 2223 2 ENSG00000196440.10 ARMCX4 chrX 101418287 101533459 + protein_coding KNOWN OTTHUMG00000022030.8 115173 13351 87 ENSG00000221132.1 AL035422.1 chrX 101427393 101427495 - miRNA NOVEL NA 103 103 1 ENSG00000270210.1 RP11-373D23.3 chr2 28425945 28426719 + lincRNA NOVEL OTTHUMG00000185292.1 775 775 1 ENSG00000234557.2 RP1-164F3.8 chrX 101443707 101444103 - processed_pseudogene KNOWN OTTHUMG00000022025.2 397 397 1 ENSG00000237682.2 RP3-514P16.1 chrX 101537485 101539276 - processed_pseudogene KNOWN OTTHUMG00000022032.3 1792 1792 1 ENSG00000126947.10 ARMCX1 chrX 101550531 101554700 + protein_coding KNOWN OTTHUMG00000022033.1 4170 2141 9 ENSG00000204072.3 ARMCX7P chrX 101597510 101598671 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000022036.3 1162 1162 2 ENSG00000198960.9 ARMCX6 chrX 101615118 101618001 - protein_coding KNOWN OTTHUMG00000022034.2 2884 2489 26 ENSG00000102401.18 ARMCX3 chrX 101622797 101627843 + protein_coding KNOWN OTTHUMG00000022035.2 5047 4239 32 ENSG00000228275.1 ARMCX3-AS1 chrX 101622983 101624164 - antisense NOVEL OTTHUMG00000022037.1 1182 490 2 ENSG00000278203.1 AC234775.1 chrX 101624057 101624157 + miRNA NOVEL NA 101 101 1 ENSG00000261101.2 RP4-545K15.5 chrX 101627868 101628523 + sense_overlapping NOVEL OTTHUMG00000175561.3 656 656 1 ENSG00000207291.1 RNU6-30P chrX 101634006 101634112 - snRNA KNOWN NA 107 107 1 ENSG00000227938.1 AC104695.4 chr2 28448167 28450184 - lincRNA NOVEL OTTHUMG00000151942.1 2018 849 2 ENSG00000184867.12 ARMCX2 chrX 101655281 101659891 - protein_coding KNOWN OTTHUMG00000022038.2 4611 3589 55 ENSG00000223753.2 GHc-602D8.2 chrX 101683780 101684449 + processed_pseudogene KNOWN OTTHUMG00000022039.3 670 670 1 ENSG00000212584.1 RNU6-587P chrX 101691580 101691685 + snRNA KNOWN NA 106 106 1 ENSG00000229090.2 RP1-232L22__A.1 chrX 101720340 101721709 - processed_pseudogene KNOWN OTTHUMG00000022040.2 1370 1370 1 ENSG00000178146.9 RP1-232L22__B.1 chrX 101778969 101780538 - processed_pseudogene KNOWN OTTHUMG00000022041.2 1570 1570 1 ENSG00000126952.15 NXF5 chrX 101832112 101857577 - protein_coding KNOWN OTTHUMG00000022042.4 25466 2158 124 ENSG00000166432.13 ZMAT1 chrX 101882288 101932031 - protein_coding KNOWN OTTHUMG00000022044.3 49744 7514 37 ENSG00000235196.3 RP1-3E10.2 chrX 101911529 101912072 + processed_pseudogene KNOWN OTTHUMG00000022043.2 544 544 1 ENSG00000252810.1 RNU6-345P chrX 101915589 101915695 + snRNA KNOWN NA 107 107 1 ENSG00000235976.2 RP1-197J16.1 chrX 101989481 101989872 - processed_pseudogene KNOWN OTTHUMG00000022045.2 392 392 1 ENSG00000163803.11 PLB1 chr2 28457145 28643788 + protein_coding KNOWN OTTHUMG00000152014.3 186644 8238 264 ENSG00000226119.1 RP1-197J16.2 chrX 102006883 102007294 + processed_pseudogene KNOWN OTTHUMG00000022046.1 412 412 1 ENSG00000234901.1 MTND6P13 chrX 102008524 102009046 - processed_pseudogene KNOWN OTTHUMG00000022047.1 523 523 1 ENSG00000184905.7 TCEAL2 chrX 102125688 102127711 + protein_coding KNOWN OTTHUMG00000022048.1 2024 1666 8 ENSG00000204071.8 TCEAL6 chrX 102140476 102142970 - protein_coding KNOWN OTTHUMG00000022050.1 2495 1375 10 ENSG00000184515.9 BEX5 chrX 102153708 102156057 - protein_coding KNOWN OTTHUMG00000022049.1 2350 1063 8 ENSG00000251525.5 TCP11X3P chrX 102173100 102185021 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000189498.1 11922 1254 10 ENSG00000268235.5 RP11-461C20.1 chrX 102215301 102229532 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000022051.3 14232 2055 29 ENSG00000269405.5 NXF2 chrX 102247161 102326719 + protein_coding KNOWN OTTHUMG00000189320.1 79559 2343 44 ENSG00000273746.1 GHc-1077H7.2 chrX 102259043 102261692 + unprocessed_pseudogene KNOWN OTTHUMG00000022052.2 2650 1203 3 ENSG00000269437.5 NXF2B chrX 102360395 102463274 - protein_coding KNOWN OTTHUMG00000154920.2 102880 3868 101 ENSG00000242915.1 SNRPGP7 chr2 28460256 28460361 - processed_pseudogene KNOWN OTTHUMG00000159107.1 106 106 1 ENSG00000215029.7 TCP11X2 chrX 102374628 102471812 - protein_coding KNOWN OTTHUMG00000152591.3 97185 2835 26 ENSG00000231590.1 RP11-353J17.3 chrX 102425428 102428074 - unitary_pseudogene KNOWN OTTHUMG00000152590.1 2647 1325 3 ENSG00000158164.6 TMSB15A chrX 102513676 102516784 - protein_coding KNOWN OTTHUMG00000022054.1 3109 685 3 ENSG00000176318.8 FOXN3P1 chrX 102546734 102548213 - processed_pseudogene KNOWN OTTHUMG00000022055.2 1480 1480 1 ENSG00000196970.7 NXF4 chrX 102549965 102571695 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000039695.1 21731 3617 35 ENSG00000125962.13 ARMCX5 chrX 102599168 102604159 + protein_coding KNOWN OTTHUMG00000022062.2 4992 4911 19 ENSG00000271147.6 RP4-769N13.6 chrX 102599512 102714671 + processed_transcript NOVEL OTTHUMG00000022059.3 115160 2711 46 ENSG00000270050.1 RP4-769N13.7 chrX 102599657 102659712 - antisense NOVEL OTTHUMG00000183959.1 60056 387 3 ENSG00000227211.2 RP5-1100E15.4 chrX 102615473 102615820 - processed_pseudogene KNOWN OTTHUMG00000022057.2 348 348 1 ENSG00000198932.11 GPRASP1 chrX 102651366 102659083 + protein_coding KNOWN OTTHUMG00000022061.2 7718 6340 20 ENSG00000230730.1 AC074011.2 chr2 28633282 28664540 - antisense NOVEL OTTHUMG00000152013.1 31259 581 2 ENSG00000252294.1 RNU6-589P chrX 102678707 102678813 - snRNA KNOWN NA 107 107 1 ENSG00000230320.1 BEND7P1 chrX 102705784 102706240 + processed_pseudogene KNOWN OTTHUMG00000022058.1 457 457 1 ENSG00000158301.17 GPRASP2 chrX 102712176 102717733 + protein_coding KNOWN OTTHUMG00000185178.1 5558 3975 23 ENSG00000198908.10 BHLHB9 chrX 102720688 102753540 + protein_coding KNOWN OTTHUMG00000022060.1 32853 5518 24 ENSG00000223546.5 LINC00630 chrX 102769161 102885406 + lincRNA NOVEL OTTHUMG00000022077.1 116246 4077 26 ENSG00000232282.1 MTND1P32 chrX 102785667 102786604 + processed_pseudogene KNOWN OTTHUMG00000022067.1 938 938 1 ENSG00000229954.1 MTND2P2 chrX 102786813 102788387 + processed_pseudogene KNOWN OTTHUMG00000022068.1 1575 945 2 ENSG00000237300.2 RP11-522L3.3 chrX 102796251 102797093 + processed_pseudogene KNOWN OTTHUMG00000022069.2 843 500 2 ENSG00000237628.2 RP11-522L3.4 chrX 102797531 102798128 + processed_pseudogene KNOWN OTTHUMG00000022070.2 598 598 1 ENSG00000228316.1 RP11-522L3.5 chrX 102798396 102799560 + processed_pseudogene KNOWN OTTHUMG00000022071.1 1165 659 2 ENSG00000222232.1 RNA5SP89 chr2 28683976 28684083 + rRNA KNOWN NA 108 108 1 ENSG00000224471.2 RP11-522L3.6 chrX 102799563 102799883 + processed_pseudogene KNOWN OTTHUMG00000022072.2 321 321 1 ENSG00000226056.1 MTND4P32 chrX 102799942 102801399 + processed_pseudogene KNOWN OTTHUMG00000022063.1 1458 1237 2 ENSG00000234886.1 MTND5P26 chrX 102803041 102806138 + processed_pseudogene KNOWN OTTHUMG00000022064.1 3098 1752 2 ENSG00000227649.1 RP11-522L3.9 chrX 102806164 102806646 - processed_pseudogene KNOWN OTTHUMG00000022065.1 483 483 1 ENSG00000229794.2 RP11-522L3.11 chrX 102806741 102807824 + processed_pseudogene KNOWN OTTHUMG00000022066.2 1084 1084 1 ENSG00000239407.4 LL0XNC01-237H1.2 chrX 102884414 102906158 + lincRNA NOVEL OTTHUMG00000022085.1 21745 1133 10 ENSG00000102128.7 RAB40AL chrX 102937250 102938962 + protein_coding KNOWN OTTHUMG00000022084.1 1713 1713 1 ENSG00000234050.1 LL0XNC01-237H1.3 chrX 102937770 102940561 - antisense NOVEL OTTHUMG00000022086.1 2792 628 2 ENSG00000224632.1 LL0XNC01-73E8.1 chrX 103007461 103008072 + processed_pseudogene KNOWN OTTHUMG00000022087.1 612 612 1 ENSG00000133169.5 BEX1 chrX 103062651 103064240 - protein_coding KNOWN OTTHUMG00000022708.1 1590 864 3 ENSG00000226833.4 AC097724.3 chr2 28708953 28736205 - antisense NOVEL OTTHUMG00000152012.1 27253 1438 9 ENSG00000221010.2 AL008708.1 chrX 103068865 103068986 - miRNA NOVEL NA 122 122 1 ENSG00000147206.15 NXF3 chrX 103075810 103093125 - protein_coding KNOWN OTTHUMG00000022088.1 17316 3526 68 ENSG00000226241.2 LL0XNC01-221F2.2 chrX 103087198 103089277 + processed_pseudogene KNOWN OTTHUMG00000022089.2 2080 2080 1 ENSG00000233071.3 RP4-635G19.1 chrX 103206010 103206899 - processed_pseudogene KNOWN OTTHUMG00000022090.3 890 890 1 ENSG00000102409.9 BEX4 chrX 103215092 103217246 + protein_coding KNOWN OTTHUMG00000022091.1 2155 1328 5 ENSG00000180964.15 TCEAL8 chrX 103252995 103255203 - protein_coding KNOWN OTTHUMG00000022094.1 2209 1222 9 ENSG00000224692.1 LL0XNC01-177E8.2 chrX 103258572 103259581 - processed_pseudogene KNOWN OTTHUMG00000022093.1 1010 841 2 ENSG00000204065.2 TCEAL5 chrX 103273691 103276872 - protein_coding KNOWN OTTHUMG00000022092.1 3182 1168 3 ENSG00000133134.10 BEX2 chrX 103309346 103311046 - protein_coding KNOWN OTTHUMG00000022095.1 1701 1176 12 ENSG00000182916.7 TCEAL7 chrX 103330196 103332326 + protein_coding KNOWN OTTHUMG00000022096.1 2131 1177 6 ENSG00000213639.8 PPP1CB chr2 28751640 28802940 + protein_coding KNOWN OTTHUMG00000152011.4 51301 5760 47 ENSG00000238049.2 LL0XNC01-105G4.3 chrX 103347462 103347729 - processed_pseudogene KNOWN OTTHUMG00000022098.1 268 268 1 ENSG00000185222.7 WBP5 chrX 103356445 103358469 + protein_coding KNOWN OTTHUMG00000022097.1 2025 1096 5 ENSG00000166681.12 NGFRAP1 chrX 103376340 103378077 + protein_coding KNOWN OTTHUMG00000022099.1 1738 1080 10 ENSG00000281091.1 RP13-349O20.2 chrX 103404777 103408299 + lincRNA NOVEL OTTHUMG00000189758.1 3523 462 6 ENSG00000234405.1 LL0XNC01-250H12.3 chrX 103497523 103500317 + antisense NOVEL OTTHUMG00000022102.1 2795 632 2 ENSG00000172476.3 RAB40A chrX 103499750 103519489 - protein_coding KNOWN OTTHUMG00000022100.1 19740 3398 4 ENSG00000133142.16 TCEAL4 chrX 103576231 103587736 + protein_coding KNOWN OTTHUMG00000022103.6 11506 2518 39 ENSG00000279894.1 GHc-857G6.7 chrX 103596608 103598904 + TEC KNOWN OTTHUMG00000175537.1 2297 2297 1 ENSG00000196507.9 TCEAL3 chrX 103607451 103629690 + protein_coding KNOWN OTTHUMG00000022106.1 22240 2305 16 ENSG00000224031.1 TCEAL3-AS1 chrX 103626076 103626492 - antisense NOVEL OTTHUMG00000022105.1 417 361 2 ENSG00000163806.14 SPDYA chr2 28782517 28850611 + protein_coding KNOWN OTTHUMG00000074041.2 68095 3483 38 ENSG00000172465.12 TCEAL1 chrX 103628704 103630953 + protein_coding KNOWN OTTHUMG00000022699.1 2250 1602 11 ENSG00000180284.5 RP5-1055C14.6 chrX 103651735 103652106 - processed_pseudogene KNOWN OTTHUMG00000022107.2 372 372 1 ENSG00000123562.15 MORF4L2 chrX 103675496 103688158 - protein_coding KNOWN OTTHUMG00000022104.1 12663 2648 57 ENSG00000231154.1 MORF4L2-AS1 chrX 103687284 103691772 + antisense NOVEL OTTHUMG00000022108.2 4489 2086 3 ENSG00000188828.10 GLRA4 chrX 103707224 103728655 - protein_coding KNOWN OTTHUMG00000022110.4 21432 2722 26 ENSG00000179363.6 TMEM31 chrX 103710909 103714028 + protein_coding KNOWN OTTHUMG00000022109.1 3120 728 3 ENSG00000123560.12 PLP1 chrX 103773718 103792619 + protein_coding KNOWN OTTHUMG00000022111.4 18902 6078 95 ENSG00000221392.1 Z73964.1 chrX 103810384 103810508 + miRNA NOVEL NA 125 125 1 ENSG00000123570.3 RAB9B chrX 103822322 103832228 - protein_coding KNOWN OTTHUMG00000022112.1 9907 3748 3 ENSG00000222419.1 RNA5SP511 chrX 103850797 103850911 - rRNA KNOWN NA 115 115 1 ENSG00000159363.16 ATP13A2 chr1 16985958 17011928 - protein_coding KNOWN OTTHUMG00000002293.3 25971 5253 173 ENSG00000273233.1 RP11-713D19.1 chr2 28810281 28810706 - lincRNA NOVEL OTTHUMG00000185837.1 426 426 1 ENSG00000231787.4 RP11-370B6.1 chrX 103904322 103904754 - processed_pseudogene KNOWN OTTHUMG00000022113.2 433 433 1 ENSG00000276298.1 LL0XNC01-116E7.5 chrX 103909126 103909449 + unprocessed_pseudogene KNOWN OTTHUMG00000188086.1 324 324 1 ENSG00000234345.2 LL0XNC01-116E7.1 chrX 103910305 103911352 - processed_pseudogene KNOWN OTTHUMG00000022114.2 1048 1048 1 ENSG00000231728.3 LL0XNC01-116E7.2 chrX 103917411 103919548 - antisense NOVEL OTTHUMG00000022115.3 2138 1311 6 ENSG00000158427.13 TMSB15B chrX 103918896 103966712 + protein_coding KNOWN OTTHUMG00000022117.4 47817 5525 19 ENSG00000230312.2 LL0XNC01-116E7.4 chrX 103928099 103929017 + processed_pseudogene KNOWN OTTHUMG00000022116.2 919 919 1 ENSG00000227067.3 DPPA3P1 chrX 103961811 103962279 - processed_pseudogene KNOWN OTTHUMG00000022118.2 469 469 1 ENSG00000123569.8 H2BFWT chrX 104011147 104013687 - protein_coding KNOWN OTTHUMG00000022120.3 2541 894 5 ENSG00000101812.11 H2BFM chrX 104039949 104042454 + protein_coding KNOWN OTTHUMG00000022122.2 2506 1882 8 ENSG00000235946.1 LL0XNC01-240C2.1 chrX 104062542 104063037 - processed_pseudogene KNOWN OTTHUMG00000022121.1 496 496 1 ENSG00000171103.9 TRMT61B chr2 28849821 28870301 - protein_coding KNOWN OTTHUMG00000128433.2 20481 2056 23 ENSG00000269226.6 TMSB15B chrX 104063871 104076212 - protein_coding PUTATIVE OTTHUMG00000188508.2 12342 3061 6 ENSG00000269743.2 SLC25A53 chrX 104099214 104157027 - protein_coding KNOWN OTTHUMG00000022124.3 57814 6845 4 ENSG00000166707.9 ZCCHC18 chrX 104112131 104115846 + protein_coding KNOWN OTTHUMG00000022123.4 3716 3389 16 ENSG00000123575.8 FAM199X chrX 104166620 104195902 + protein_coding KNOWN OTTHUMG00000022126.1 29283 7457 10 ENSG00000123576.5 ESX1 chrX 104250038 104254933 - protein_coding KNOWN OTTHUMG00000022125.2 4896 1495 4 ENSG00000189108.11 IL1RAPL2 chrX 104566315 105767829 + protein_coding KNOWN OTTHUMG00000022141.1 1201515 3147 20 ENSG00000232665.2 PHBP10 chrX 104647216 104647999 - processed_pseudogene KNOWN OTTHUMG00000022127.2 784 784 1 ENSG00000223733.1 RPL18AP14 chrX 104803915 104804440 + processed_pseudogene KNOWN OTTHUMG00000022128.1 526 526 1 ENSG00000268629.5 TEX13A chrX 105218929 105220674 - protein_coding KNOWN OTTHUMG00000022133.3 1746 1377 6 ENSG00000181819.14 KCTD9P2 chrX 105405647 105407039 + processed_pseudogene KNOWN OTTHUMG00000022140.2 1393 1013 4 ENSG00000163811.10 WDR43 chr2 28894643 28948222 + protein_coding KNOWN OTTHUMG00000152015.3 53580 4130 46 ENSG00000206864.1 RNU6-207P chrX 105676071 105676177 - snRNA KNOWN NA 107 107 1 ENSG00000123572.15 NRK chrX 105822543 105958610 + protein_coding KNOWN OTTHUMG00000022143.9 136068 9573 63 ENSG00000222161.1 Z97356.1 chrX 105860689 105860762 + miRNA NOVEL NA 74 74 1 ENSG00000123561.13 SERPINA7 chrX 106032442 106038738 - protein_coding KNOWN OTTHUMG00000022144.2 6297 2744 12 ENSG00000230788.2 RP11-560L11.1 chrX 106070481 106073202 + processed_pseudogene KNOWN OTTHUMG00000022145.2 2722 1253 2 ENSG00000157502.11 MUM1L1 chrX 106168305 106208956 + protein_coding KNOWN OTTHUMG00000022146.1 40652 4343 18 ENSG00000256709.2 RP1-19N1.1 chrX 106327534 106327824 + processed_pseudogene KNOWN OTTHUMG00000186882.1 291 291 1 ENSG00000202407.1 Y_RNA chrX 106426568 106426669 + misc_RNA NOVEL NA 102 102 1 ENSG00000224816.1 NAP1L4P2 chrX 106466542 106467440 - processed_pseudogene KNOWN OTTHUMG00000022148.1 899 899 1 ENSG00000227657.1 SERPINA7P1 chrX 106562774 106563404 - unprocessed_pseudogene KNOWN OTTHUMG00000022149.1 631 631 1 ENSG00000264994.1 SNORD92 chr2 28913664 28913748 + snoRNA KNOWN NA 85 85 1 ENSG00000277673.1 RP13-483F6.2 chrX 106566021 106566161 + unprocessed_pseudogene KNOWN OTTHUMG00000188085.1 141 141 1 ENSG00000147231.12 CXorf57 chrX 106611930 106679442 + protein_coding KNOWN OTTHUMG00000022150.3 67513 4853 55 ENSG00000263515.1 MIR548AN chrX 106639814 106639896 + miRNA KNOWN NA 83 83 1 ENSG00000133135.12 RNF128 chrX 106693794 106796993 + protein_coding KNOWN OTTHUMG00000022151.1 103200 3432 20 ENSG00000133138.18 TBC1D8B chrX 106802680 106876145 + protein_coding KNOWN OTTHUMG00000022152.2 73466 9503 71 ENSG00000133131.13 MORC4 chrX 106813871 107000244 - protein_coding KNOWN OTTHUMG00000022155.4 186374 6055 38 ENSG00000147223.5 RIPPLY1 chrX 106900063 106903335 - protein_coding KNOWN OTTHUMG00000022153.2 3273 1190 6 ENSG00000165376.9 CLDN2 chrX 106900164 106930861 + protein_coding KNOWN OTTHUMG00000022154.1 30698 3410 6 ENSG00000231144.1 EEF1A1P40 chrX 107032248 107032820 + processed_pseudogene KNOWN OTTHUMG00000022157.1 573 573 1 ENSG00000089682.15 RBM41 chrX 107064420 107118823 - protein_coding KNOWN OTTHUMG00000022156.4 54404 6101 42 ENSG00000265145.1 SNORD53 chr2 28927067 28927144 + snoRNA KNOWN NA 78 78 1 ENSG00000198088.9 NUP62CL chrX 107123427 107206433 - protein_coding KNOWN OTTHUMG00000022159.3 83007 1867 28 ENSG00000213569.4 RP13-383K5.4 chrX 107131659 107132269 + processed_pseudogene KNOWN OTTHUMG00000022158.2 611 611 1 ENSG00000199832.1 Y_RNA chrX 107202577 107202683 + misc_RNA NOVEL NA 107 107 1 ENSG00000080572.11 PIH1D3 chrX 107206632 107244243 + protein_coding KNOWN OTTHUMG00000022160.1 37612 1931 22 ENSG00000204053.6 MYCLP1 chrX 107272582 107273656 + processed_pseudogene KNOWN OTTHUMG00000022162.3 1075 1075 1 ENSG00000215007.3 DNAJA1P3 chrX 107351650 107352843 - processed_pseudogene KNOWN OTTHUMG00000022161.2 1194 1194 1 ENSG00000214720.4 KRT18P49 chrX 107428630 107429461 + processed_pseudogene KNOWN OTTHUMG00000022163.2 832 832 1 ENSG00000207846.1 AL035088.1 chrX 107428989 107429079 + miRNA NOVEL NA 91 91 1 ENSG00000227610.1 FRMPD3-AS1 chrX 107512983 107545821 - antisense NOVEL OTTHUMG00000022164.1 32839 457 2 ENSG00000147234.9 FRMPD3 chrX 107522450 107605251 + protein_coding KNOWN OTTHUMG00000022165.2 82802 9158 34 ENSG00000222224.1 Y_RNA chr2 28927243 28927340 - misc_RNA NOVEL NA 98 98 1 ENSG00000147224.9 PRPS1 chrX 107628424 107651026 + protein_coding KNOWN OTTHUMG00000022167.1 22603 2280 19 ENSG00000280469.1 AL772400.1 chrX 107698516 107698603 - miRNA NOVEL NA 88 88 1 ENSG00000157514.15 TSC22D3 chrX 107713221 107777342 - protein_coding KNOWN OTTHUMG00000022168.2 64122 4766 51 ENSG00000170935.6 NCBP2L chrX 107777733 107794682 + protein_coding KNOWN OTTHUMG00000022169.2 16950 660 2 ENSG00000080561.12 MID2 chrX 107825755 107927193 + protein_coding KNOWN OTTHUMG00000022171.2 101439 3097 25 ENSG00000236064.1 RP6-191P20.4 chrX 107894597 107935980 - antisense NOVEL OTTHUMG00000022173.1 41384 2090 4 ENSG00000207363.1 Y_RNA chrX 107901145 107901246 - misc_RNA NOVEL NA 102 102 1 ENSG00000225728.2 RP6-191P20.3 chrX 107939263 107939642 - processed_pseudogene KNOWN OTTHUMG00000022172.2 380 380 1 ENSG00000277883.1 RP6-191P20.5 chrX 107974078 107985008 + unprocessed_pseudogene KNOWN OTTHUMG00000188083.1 10931 1785 3 ENSG00000170925.3 TEX13B chrX 107980864 107982370 - protein_coding KNOWN OTTHUMG00000022174.1 1507 1248 3 ENSG00000265706.1 SNORD53_SNORD92 chr2 28927983 28928060 + snoRNA NOVEL NA 78 78 1 ENSG00000101842.12 VSIG1 chrX 108044970 108079184 + protein_coding KNOWN OTTHUMG00000022175.2 34215 3769 25 ENSG00000101843.17 PSMD10 chrX 108084207 108091618 - protein_coding KNOWN OTTHUMG00000022177.2 7412 2459 31 ENSG00000101844.16 ATG4A chrX 108091668 108154671 + protein_coding KNOWN OTTHUMG00000022176.7 63004 2927 75 ENSG00000197565.14 COL4A6 chrX 108155607 108439497 - protein_coding KNOWN OTTHUMG00000022179.2 283891 9282 285 ENSG00000189372.4 RP6-149D17.1 chrX 108383398 108383993 + unprocessed_pseudogene KNOWN OTTHUMG00000022178.1 596 477 2 ENSG00000188153.11 COL4A5 chrX 108439844 108697545 + protein_coding KNOWN OTTHUMG00000022182.4 257702 8738 154 ENSG00000207146.1 Y_RNA chrX 108676951 108677057 - misc_RNA NOVEL NA 107 107 1 ENSG00000261409.1 RP6-24A23.7 chrX 108719949 108724944 - sense_overlapping NOVEL OTTHUMG00000175497.1 4996 4996 1 ENSG00000260548.1 RP6-24A23.6 chrX 108722070 108732687 - protein_coding PUTATIVE OTTHUMG00000175498.1 10618 563 2 ENSG00000280322.1 RP6-24A23.8 chrX 108725886 108726948 - TEC KNOWN OTTHUMG00000175499.1 1063 1063 1 ENSG00000189350.11 FAM179A chr2 28956611 29061373 + protein_coding KNOWN OTTHUMG00000128432.6 104763 19816 53 ENSG00000133124.11 IRS4 chrX 108732482 108736409 - protein_coding KNOWN OTTHUMG00000022181.1 3928 3928 1 ENSG00000237863.2 RP6-24A23.3 chrX 108736011 108738903 + antisense NOVEL OTTHUMG00000022180.2 2893 1498 5 ENSG00000201443.1 RNU6-309P chrX 108826764 108826869 + snRNA KNOWN NA 106 106 1 ENSG00000226958.1 CTD-2328D6.1 chrX 109054131 109054562 - processed_pseudogene KNOWN OTTHUMG00000040033.1 432 432 1 ENSG00000275110.1 MIR6087 chrX 109054542 109054590 + miRNA KNOWN NA 49 49 1 ENSG00000215000.4 RP1-31B8.1 chrX 109341813 109342697 + processed_pseudogene KNOWN OTTHUMG00000022183.1 885 885 1 ENSG00000101890.4 GUCY2F chrX 109372906 109482072 - protein_coding KNOWN OTTHUMG00000022184.1 109167 3714 20 ENSG00000101888.10 NXT2 chrX 109535781 109544690 + protein_coding KNOWN OTTHUMG00000022185.2 8910 3064 18 ENSG00000233874.2 RP1-136J15.5 chrX 109568478 109570289 + processed_pseudogene KNOWN OTTHUMG00000022188.2 1812 1812 1 ENSG00000176076.7 KCNE5 chrX 109623700 109625172 - protein_coding KNOWN OTTHUMG00000022189.1 1473 1473 1 ENSG00000200283.1 Y_RNA chr2 28972414 28972521 - misc_RNA NOVEL NA 108 108 1 ENSG00000068366.18 ACSL4 chrX 109624244 109733403 - protein_coding KNOWN OTTHUMG00000022190.4 109160 6415 80 ENSG00000237319.1 RP1-136J15.1 chrX 109636834 109637063 + processed_pseudogene KNOWN OTTHUMG00000040035.1 230 230 1 ENSG00000280934.1 AL118496.1 chrX 109659904 109659968 - miRNA NOVEL NA 65 65 1 ENSG00000252069.1 Y_RNA chrX 109744643 109744749 - misc_RNA NOVEL NA 107 107 1 ENSG00000225381.2 RPS5P7 chrX 109853312 109853919 + processed_pseudogene KNOWN OTTHUMG00000022191.2 608 608 1 ENSG00000157600.10 TMEM164 chrX 110002631 110182734 + protein_coding KNOWN OTTHUMG00000022192.1 180104 6583 39 ENSG00000208013.2 MIR652 chrX 110055319 110055427 + miRNA KNOWN NA 109 109 1 ENSG00000265584.1 MIR3978 chrX 110082118 110082218 + miRNA KNOWN NA 101 101 1 ENSG00000101935.8 AMMECR1 chrX 110194186 110440233 - protein_coding KNOWN OTTHUMG00000022197.3 246048 6516 24 ENSG00000208883.1 SNORD96B chrX 110224985 110225063 - snoRNA KNOWN NA 79 79 1 ENSG00000179270.6 C2orf71 chr2 29060976 29074261 - protein_coding KNOWN OTTHUMG00000152024.3 13286 7273 5 ENSG00000281776.1 AL079334.1 chrX 110248911 110249004 + miRNA NOVEL NA 94 94 1 ENSG00000224142.1 AMMECR1-IT1 chrX 110305420 110307221 - sense_intronic NOVEL OTTHUMG00000022194.1 1802 561 2 ENSG00000133136.4 GNG5P2 chrX 110346703 110346909 - processed_pseudogene KNOWN OTTHUMG00000022193.2 207 207 1 ENSG00000243978.7 RGAG1 chrX 110358816 110456334 + protein_coding KNOWN OTTHUMG00000022196.3 97519 5529 9 ENSG00000225366.4 TDGF1P3 chrX 110520312 110523021 + transcribed_processed_pseudogene KNOWN OTTHUMG00000022195.3 2710 2710 2 ENSG00000228042.2 RP11-441A11.1 chrX 110636841 110637672 + processed_pseudogene KNOWN OTTHUMG00000022198.2 832 832 1 ENSG00000101938.13 CHRDL1 chrX 110673856 110795819 - protein_coding KNOWN OTTHUMG00000022199.3 121964 3920 58 ENSG00000077264.13 PAK3 chrX 110944285 111227361 + protein_coding KNOWN OTTHUMG00000022202.3 283077 10312 182 ENSG00000226112.1 FCF1P4 chrX 111169221 111169403 + processed_pseudogene KNOWN OTTHUMG00000022200.1 183 183 1 ENSG00000234349.1 GLUD1P9 chrX 111229889 111231061 - processed_pseudogene KNOWN OTTHUMG00000022201.1 1173 1173 1 ENSG00000230092.6 RP11-206L10.8 chr1 800879 817712 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000002403.3 16834 872 8 ENSG00000117118.8 SDHB chr1 17018722 17054170 - protein_coding KNOWN OTTHUMG00000002289.3 35449 2462 38 ENSG00000263957.1 AC105398.1 chr2 29081270 29081351 - miRNA NOVEL NA 82 82 1 ENSG00000077274.8 CAPN6 chrX 111245103 111270523 - protein_coding KNOWN OTTHUMG00000022203.1 25421 3568 13 ENSG00000077279.15 DCX chrX 111293780 111412375 - protein_coding KNOWN OTTHUMG00000022204.4 118596 10138 43 ENSG00000251954.1 RNU6-496P chrX 111421510 111421608 - snRNA KNOWN NA 99 99 1 ENSG00000223904.2 HMGB1P12 chrX 111434427 111435024 + processed_pseudogene KNOWN OTTHUMG00000022205.2 598 598 1 ENSG00000260802.1 LINC00890 chrX 111511662 111522399 + lincRNA NOVEL OTTHUMG00000173027.3 10738 4758 5 ENSG00000229939.1 RP11-111F16.2 chrX 111618808 111619094 + processed_pseudogene KNOWN OTTHUMG00000022207.1 287 287 1 ENSG00000225031.1 EIF4BP7 chrX 111619677 111621489 - processed_pseudogene KNOWN OTTHUMG00000022206.1 1813 1813 1 ENSG00000236189.2 RPL18AP15 chrX 111624210 111624726 - processed_pseudogene KNOWN OTTHUMG00000022208.2 517 517 1 ENSG00000101901.9 ALG13 chrX 111665811 111760649 + protein_coding KNOWN OTTHUMG00000022209.12 94839 7925 369 ENSG00000201420.1 RNA5SP512 chrX 111669829 111669948 - rRNA KNOWN NA 120 120 1 ENSG00000229224.1 AC105398.3 chr2 29096843 29097525 - antisense NOVEL OTTHUMG00000152025.1 683 402 2 ENSG00000229487.1 ALG13-AS1 chrX 111706649 111711101 - antisense NOVEL OTTHUMG00000067670.1 4453 195 2 ENSG00000072315.3 TRPC5 chrX 111774315 112082776 - protein_coding KNOWN OTTHUMG00000022212.1 308462 5839 11 ENSG00000204025.5 TRPC5OS chrX 111876051 111903990 + antisense NOVEL OTTHUMG00000022211.1 27940 2945 8 ENSG00000271421.1 RP1-269O5.3 chrX 111930735 111931092 + processed_pseudogene KNOWN OTTHUMG00000185067.1 358 358 1 ENSG00000265858.1 AL031176.1 chrX 112259493 112259574 - miRNA NOVEL NA 82 82 1 ENSG00000271464.1 DPRXP7 chrX 112319952 112320417 - processed_pseudogene KNOWN OTTHUMG00000185258.1 466 466 1 ENSG00000271400.1 RP13-266I11.1 chrX 112381392 112382220 + processed_pseudogene KNOWN OTTHUMG00000185065.1 829 829 1 ENSG00000187823.3 ZCCHC16 chrX 112454500 112457112 + protein_coding KNOWN OTTHUMG00000159706.1 2613 2613 1 ENSG00000281109.1 BX088563.1 chrX 112486059 112486127 - miRNA NOVEL NA 69 69 1 ENSG00000182508.12 LHFPL1 chrX 112630648 112680054 - protein_coding KNOWN OTTHUMG00000022214.1 49407 1750 7 ENSG00000115295.18 CLIP4 chr2 29097705 29189643 + protein_coding KNOWN OTTHUMG00000097837.3 91939 7775 112 ENSG00000200436.1 Y_RNA chrX 112661657 112661768 + misc_RNA NOVEL NA 112 112 1 ENSG00000213652.3 HMGB3P30 chrX 112689915 112690520 + processed_pseudogene KNOWN OTTHUMG00000022215.1 606 606 1 ENSG00000126016.12 AMOT chrX 112774503 112840815 - protein_coding KNOWN OTTHUMG00000022216.3 66313 8502 59 ENSG00000263351.1 MIR4329 chrX 112780718 112780788 - miRNA KNOWN NA 71 71 1 ENSG00000243011.3 RN7SL266P chrX 112855874 112856162 + misc_RNA KNOWN NA 289 289 1 ENSG00000232025.1 RP1-218B13.1 chrX 112917636 112917761 + processed_pseudogene KNOWN OTTHUMG00000022217.1 126 126 1 ENSG00000252930.1 RNU6-1015P chrX 112919132 112919230 + snRNA KNOWN NA 99 99 1 ENSG00000277832.1 AC002072.1 chrX 112978229 112978318 - miRNA NOVEL NA 90 90 1 ENSG00000221175.2 AL023876.1 chrX 113024429 113024506 - miRNA NOVEL NA 78 78 1 ENSG00000235329.2 RP5-1168A5.1 chrX 113347413 113347619 + processed_pseudogene KNOWN OTTHUMG00000022218.2 207 207 1 ENSG00000171094.14 ALK chr2 29192774 29921566 - protein_coding KNOWN OTTHUMG00000152034.1 728793 6932 77 ENSG00000220541.4 RP5-1170D6.1 chrX 113522482 113522989 + processed_pseudogene KNOWN OTTHUMG00000022219.1 508 508 1 ENSG00000241743.2 RP5-964N17.1 chrX 113616300 113938218 - lincRNA NOVEL OTTHUMG00000022220.3 321919 497 3 ENSG00000270524.1 QTRT1P1 chrX 113882590 113883667 + processed_pseudogene KNOWN OTTHUMG00000184984.1 1078 1078 1 ENSG00000201674.2 U3 chrX 113944186 113944399 - snoRNA NOVEL NA 214 214 1 ENSG00000207220.1 RNU1-57P chrX 113949917 113950082 + snRNA KNOWN NA 166 166 1 ENSG00000240327.3 RN7SL93P chrX 113976341 113976633 - misc_RNA KNOWN NA 293 293 1 ENSG00000212611.1 SNORD30 chrX 114017033 114017102 + snoRNA NOVEL NA 70 70 1 ENSG00000230502.1 CTD-2230M5.1 chrX 114388988 114389155 - processed_pseudogene KNOWN OTTHUMG00000040049.1 168 168 1 ENSG00000271686.1 CTD-2230M5.3 chrX 114389135 114389954 + processed_pseudogene KNOWN OTTHUMG00000185063.1 820 820 1 ENSG00000226547.2 SSU72P1 chrX 114390674 114391256 + processed_pseudogene KNOWN OTTHUMG00000022221.2 583 583 1 ENSG00000280947.1 AC093756.1 chr2 29681024 29681102 - miRNA NOVEL NA 79 79 1 ENSG00000147246.8 HTR2C chrX 114584078 114910061 + protein_coding KNOWN OTTHUMG00000022226.3 325984 4842 19 ENSG00000224664.2 RPL36AP53 chrX 114589620 114589935 + processed_pseudogene KNOWN OTTHUMG00000022222.2 316 316 1 ENSG00000208839.1 SNORA35 chrX 114630797 114630924 + snoRNA KNOWN NA 128 128 1 ENSG00000263653.1 AC233299.1 chrX 114636260 114636366 + miRNA NOVEL NA 107 107 1 ENSG00000212100.2 MIR764 chrX 114639435 114639519 + miRNA KNOWN NA 85 85 1 ENSG00000222321.1 MIR1912 chrX 114651544 114651623 + miRNA KNOWN NA 80 80 1 ENSG00000276158.1 AC233299.2 chrX 114652625 114652736 + miRNA NOVEL NA 112 112 1 ENSG00000221710.1 MIR1298 chrX 114715233 114715344 + miRNA KNOWN NA 112 112 1 ENSG00000222715.1 MIR1911 chrX 114763184 114763263 + miRNA KNOWN NA 80 80 1 ENSG00000224773.2 HSPA8P7 chrX 114774828 114776775 - processed_pseudogene KNOWN OTTHUMG00000022224.3 1948 1948 1 ENSG00000242699.3 RN7SL516P chr2 29681027 29681323 - misc_RNA KNOWN NA 297 297 1 ENSG00000199001.1 MIR448 chrX 114823454 114823564 + miRNA KNOWN NA 111 111 1 ENSG00000270413.1 RP11-810O3.2 chrX 114900359 114900574 - processed_pseudogene KNOWN OTTHUMG00000185050.1 216 216 1 ENSG00000123496.6 IL13RA2 chrX 115003975 115019977 - protein_coding KNOWN OTTHUMG00000022229.1 16003 1626 26 ENSG00000222122.1 RNU6-648P chrX 115032427 115032533 + snRNA KNOWN NA 107 107 1 ENSG00000238223.1 RP6-204F4.2 chrX 115063936 115064794 - processed_pseudogene KNOWN OTTHUMG00000022227.1 859 859 1 ENSG00000236080.2 YAP1P2 chrX 115069237 115069846 + processed_pseudogene KNOWN OTTHUMG00000022228.1 610 610 1 ENSG00000130224.13 LRCH2 chrX 115110616 115234072 - protein_coding KNOWN OTTHUMG00000022233.3 123457 4929 41 ENSG00000271907.1 SNORA35 chrX 115126316 115126444 - snoRNA NOVEL NA 129 129 1 ENSG00000212241.1 Y_RNA chrX 115139030 115139123 - misc_RNA NOVEL NA 94 94 1 ENSG00000175718.9 RBMXL3 chrX 115189427 115192868 + protein_coding KNOWN OTTHUMG00000022230.3 3442 3442 1 ENSG00000230737.1 AC106870.1 chr2 29890371 29892354 + antisense NOVEL OTTHUMG00000152001.1 1984 691 2 ENSG00000235656.1 RPL36P18 chrX 115198432 115198749 + processed_pseudogene KNOWN OTTHUMG00000022231.1 318 318 1 ENSG00000102021.9 LUZP4 chrX 115289727 115307556 + protein_coding KNOWN OTTHUMG00000022234.2 17830 1727 7 ENSG00000274374.1 RP5-878I13.1 chrX 115424064 115425600 - processed_pseudogene KNOWN OTTHUMG00000022235.3 1537 1165 2 ENSG00000271021.1 RP5-878I13.2 chrX 115454733 115455194 - processed_pseudogene KNOWN OTTHUMG00000185051.1 462 462 1 ENSG00000271826.4 PLS3-AS1 chrX 115518182 115562731 - antisense NOVEL OTTHUMG00000185326.2 44550 2075 7 ENSG00000252441.1 SNORA64 chrX 115545637 115545717 + snoRNA NOVEL NA 81 81 1 ENSG00000102024.16 PLS3 chrX 115561174 115650861 + protein_coding KNOWN OTTHUMG00000022237.8 89688 4145 107 ENSG00000281638.1 AL589842.1 chrX 115622308 115649561 + protein_coding KNOWN NA 27254 1758 14 ENSG00000270431.1 RP1-241P17.7 chrX 115659713 115660022 + processed_pseudogene KNOWN OTTHUMG00000184988.1 310 310 1 ENSG00000227881.1 ASS1P5 chrX 115664895 115666133 + processed_pseudogene KNOWN OTTHUMG00000022236.1 1239 1239 1 ENSG00000197644.2 AC106870.2 chr2 29899597 29907199 + antisense NOVEL OTTHUMG00000152004.1 7603 200 2 ENSG00000234785.1 EEF1GP5 chrX 115702811 115704120 + processed_pseudogene KNOWN OTTHUMG00000022238.1 1310 1310 1 ENSG00000264759.1 AC005000.1 chrX 115703812 115703867 + miRNA NOVEL NA 56 56 1 ENSG00000228532.4 RP1-241P17.4 chrX 115718942 115719229 - processed_pseudogene KNOWN OTTHUMG00000022239.2 288 288 1 ENSG00000229335.1 RP1-241P17.1 chrX 115840964 115843050 + antisense NOVEL OTTHUMG00000033102.1 2087 446 5 ENSG00000235244.3 RP11-761E20.1 chrX 115917271 115969089 - lincRNA NOVEL OTTHUMG00000022240.1 51819 2079 3 ENSG00000266828.2 RN7SL712P chrX 115992466 115992773 - misc_RNA KNOWN NA 308 308 1 ENSG00000231371.1 AKR1B1P8 chrX 116043483 116044418 + processed_pseudogene KNOWN OTTHUMG00000022241.1 936 936 1 ENSG00000234558.1 API5P1 chrX 116106921 116108430 - processed_pseudogene KNOWN OTTHUMG00000022242.1 1510 1510 1 ENSG00000180772.6 AGTR2 chrX 116170722 116174972 + protein_coding KNOWN OTTHUMG00000022243.1 4251 2882 3 ENSG00000207033.1 RNU6-154P chrX 116400848 116400953 - snRNA KNOWN NA 106 106 1 ENSG00000233862.4 AC016907.3 chr2 30051066 30143804 - antisense NOVEL OTTHUMG00000152000.2 92739 4218 9 ENSG00000268104.2 SLC6A14 chrX 116436622 116461458 + protein_coding KNOWN OTTHUMG00000022245.3 24837 4520 17 ENSG00000204019.4 CT83 chrX 116461682 116463003 - protein_coding KNOWN OTTHUMG00000022244.1 1322 548 2 ENSG00000236077.2 RP11-232D9.2 chrX 116669810 116680303 - unprocessed_pseudogene KNOWN OTTHUMG00000022246.2 10494 957 7 ENSG00000237860.1 RP11-232D9.4 chrX 116688870 116690185 + unprocessed_pseudogene KNOWN OTTHUMG00000022247.1 1316 301 2 ENSG00000230159.1 RP11-232D9.3 chrX 116692910 116694188 - lincRNA NOVEL OTTHUMG00000022248.1 1279 512 2 ENSG00000224217.1 RP11-232D9.1 chrX 116748530 116748877 - processed_pseudogene KNOWN OTTHUMG00000040051.1 348 348 1 ENSG00000206752.1 RNU6-1323P chrX 116850839 116850945 - snRNA KNOWN NA 107 107 1 ENSG00000213526.3 SETP8 chrX 116963049 116963676 + processed_pseudogene KNOWN OTTHUMG00000022249.1 628 628 1 ENSG00000238066.1 RP3-378P9.1 chrX 117397938 117398206 + processed_pseudogene KNOWN OTTHUMG00000022250.1 269 269 1 ENSG00000224314.1 RP3-378P9.2 chrX 117399452 117400081 + processed_pseudogene KNOWN OTTHUMG00000022251.1 630 540 2 ENSG00000221383.1 AC016907.1 chr2 30066124 30066213 - miRNA NOVEL NA 90 90 1 ENSG00000279587.1 RP1-278D1.2 chrX 117894632 117895683 - TEC KNOWN OTTHUMG00000175556.1 1052 1052 1 ENSG00000003096.12 KLHL13 chrX 117897813 118117340 - protein_coding KNOWN OTTHUMG00000022252.2 219528 6983 77 ENSG00000200291.1 Y_RNA chrX 117914244 117914345 - misc_RNA NOVEL NA 102 102 1 ENSG00000239500.2 RP1-169K13.3 chrX 118116179 118116800 - processed_pseudogene KNOWN OTTHUMG00000022253.2 622 622 1 ENSG00000237458.1 TUBB4BP3 chrX 118128748 118129018 + processed_pseudogene KNOWN OTTHUMG00000040068.1 271 271 1 ENSG00000234524.1 RPL12P43 chrX 118146063 118146561 + processed_pseudogene KNOWN OTTHUMG00000040069.1 499 499 1 ENSG00000270619.1 RP11-197B12.1 chrX 118278159 118283367 + processed_pseudogene KNOWN OTTHUMG00000185062.1 5209 190 2 ENSG00000131725.12 WDR44 chrX 118346073 118449961 + protein_coding KNOWN OTTHUMG00000022254.1 103889 4202 79 ENSG00000221463.2 MIR1277 chrX 118386370 118386477 + miRNA KNOWN NA 108 108 1 ENSG00000147251.14 DOCK11 chrX 118495898 118686163 + protein_coding KNOWN OTTHUMG00000022256.2 190266 6664 106 ENSG00000117115.11 PADI2 chr1 17066761 17119435 - protein_coding KNOWN OTTHUMG00000002295.1 52675 5984 38 ENSG00000225943.1 AC016907.2 chr2 30077093 30078272 + processed_pseudogene KNOWN OTTHUMG00000152003.1 1180 435 2 ENSG00000206862.1 Y_RNA chrX 118569405 118569515 - misc_RNA NOVEL NA 111 111 1 ENSG00000230399.1 RBBP8P1 chrX 118632375 118634218 - processed_pseudogene KNOWN OTTHUMG00000022255.1 1844 1844 1 ENSG00000131724.9 IL13RA1 chrX 118727572 118794539 + protein_coding KNOWN OTTHUMG00000022258.1 66968 4372 23 ENSG00000239182.1 SNORA35 chrX 118738055 118738182 + snoRNA NOVEL NA 128 128 1 ENSG00000250995.1 RP13-128O4.3 chrX 118769796 118770857 + processed_pseudogene KNOWN OTTHUMG00000022257.1 1062 1062 1 ENSG00000174460.3 ZCCHC12 chrX 118823790 118826968 + protein_coding KNOWN OTTHUMG00000022261.1 3179 2231 4 ENSG00000203650.6 LINC01285 chrX 118839556 118882015 + lincRNA NOVEL OTTHUMG00000022260.2 42460 2527 14 ENSG00000224341.1 RP4-562J12.1 chrX 118877886 118879185 - processed_pseudogene KNOWN OTTHUMG00000022259.1 1300 959 2 ENSG00000231270.1 RP13-347D8.1 chrX 118938153 118939134 + processed_pseudogene KNOWN OTTHUMG00000022263.1 982 905 2 ENSG00000175556.15 LONRF3 chrX 118974614 119018355 + protein_coding KNOWN OTTHUMG00000022262.6 43742 4041 66 ENSG00000119801.11 YPEL5 chr2 30146941 30160533 + protein_coding KNOWN OTTHUMG00000097839.4 13593 3421 36 ENSG00000277535.1 RP13-347D8.7 chrX 119073226 119075081 + unprocessed_pseudogene KNOWN OTTHUMG00000188075.1 1856 831 4 ENSG00000250423.2 KIAA1210 chrX 119078635 119150579 - protein_coding KNOWN OTTHUMG00000162980.2 71945 7824 14 ENSG00000227864.1 ARL5AP1 chrX 119186442 119186829 - processed_pseudogene KNOWN OTTHUMG00000022265.1 388 388 1 ENSG00000230170.1 HNRNPA1P28 chrX 119220782 119221742 + processed_pseudogene KNOWN OTTHUMG00000022266.1 961 961 1 ENSG00000270625.1 RP4-555N2.4 chrX 119222564 119223245 - processed_pseudogene KNOWN OTTHUMG00000185061.1 682 682 1 ENSG00000101856.9 PGRMC1 chrX 119236245 119244466 + protein_coding KNOWN OTTHUMG00000022268.1 8222 1919 5 ENSG00000214992.6 AKAP17BP chrX 119249346 119257667 - unprocessed_pseudogene KNOWN OTTHUMG00000022267.3 8322 2719 4 ENSG00000230392.1 RP5-1139I1.1 chrX 119291529 119335610 + lincRNA NOVEL OTTHUMG00000022271.1 44082 2907 4 ENSG00000226661.1 RP5-1139I1.2 chrX 119356301 119393595 - antisense NOVEL OTTHUMG00000022269.1 37295 635 3 ENSG00000227814.3 MRPS17P9 chrX 119379712 119380104 + processed_pseudogene KNOWN OTTHUMG00000022270.2 393 393 1 ENSG00000207187.1 SNORA64 chr2 30187434 30187566 + snoRNA NOVEL NA 133 133 1 ENSG00000077713.17 SLC25A43 chrX 119399060 119454478 + protein_coding KNOWN OTTHUMG00000022272.1 55419 3115 18 ENSG00000237903.1 RP3-404F18.5 chrX 119422917 119423547 + sense_intronic NOVEL OTTHUMG00000022274.1 631 433 2 ENSG00000207175.1 RNU1-67P chrX 119423742 119423905 + snRNA KNOWN NA 164 164 1 ENSG00000264952.1 AC004000.1 chrX 119424065 119424116 + miRNA NOVEL NA 52 52 1 ENSG00000266420.2 RN7SL118P chrX 119434519 119434820 + misc_RNA KNOWN NA 302 302 1 ENSG00000252147.1 RNY3P16 chrX 119456558 119456658 + misc_RNA KNOWN NA 101 101 1 ENSG00000224281.4 SLC25A5-AS1 chrX 119466034 119469098 - processed_transcript NOVEL OTTHUMG00000022273.2 3065 3065 7 ENSG00000005022.5 SLC25A5 chrX 119468400 119471319 + protein_coding KNOWN OTTHUMG00000022715.2 2920 1500 12 ENSG00000277275.1 AC004000.2 chrX 119524455 119524563 + miRNA NOVEL NA 109 109 1 ENSG00000018610.12 CXorf56 chrX 119538149 119565408 - protein_coding KNOWN OTTHUMG00000022276.6 27260 2580 16 ENSG00000231712.1 AC104698.2 chr2 30209995 30210307 + processed_pseudogene KNOWN OTTHUMG00000152128.2 313 276 2 ENSG00000077721.14 UBE2A chrX 119574467 119591083 + protein_coding KNOWN OTTHUMG00000022275.4 16617 5276 50 ENSG00000186416.11 NKRF chrX 119588337 119605895 - protein_coding KNOWN OTTHUMG00000022277.1 17559 4004 14 ENSG00000125354.21 SEPT6 chrX 119615724 119693370 - protein_coding KNOWN OTTHUMG00000022280.4 77647 6245 79 ENSG00000211578.2 MIR766 chrX 119646743 119646854 - miRNA KNOWN NA 112 112 1 ENSG00000279601.1 CTA-38K21.2 chrX 119693568 119696059 + TEC KNOWN OTTHUMG00000175503.1 2492 2492 1 ENSG00000187808.4 SOWAHD chrX 119758613 119760164 + protein_coding KNOWN OTTHUMG00000159606.1 1552 1552 1 ENSG00000198918.7 RPL39 chrX 119786504 119791643 - protein_coding KNOWN OTTHUMG00000022278.1 5140 2141 7 ENSG00000206622.1 SNORA69 chrX 119787353 119787484 - snoRNA KNOWN NA 132 132 1 ENSG00000277555.1 CTA-38K21.5 chrX 119807433 119807581 - unprocessed_pseudogene KNOWN OTTHUMG00000188076.1 149 149 1 ENSG00000273811.1 AC005052.1 chrX 119810257 119810359 - miRNA NOVEL NA 103 103 1 ENSG00000213626.10 LBH chr2 30231531 30323730 + protein_coding KNOWN OTTHUMG00000152051.3 92200 4535 27 ENSG00000278244.1 CTA-38K21.3 chrX 119815164 119815307 - unprocessed_pseudogene KNOWN OTTHUMG00000188077.1 144 144 1 ENSG00000278504.1 CTA-38K21.4 chrX 119822906 119823043 - unprocessed_pseudogene KNOWN OTTHUMG00000188078.1 138 138 1 ENSG00000276354.1 RP3-327A19.7 chrX 119831616 119831759 - unprocessed_pseudogene KNOWN OTTHUMG00000188079.1 144 144 1 ENSG00000125351.9 UPF3B chrX 119834022 119852998 - protein_coding KNOWN OTTHUMG00000022282.1 18977 2531 36 ENSG00000125352.5 RNF113A chrX 119870475 119871827 - protein_coding KNOWN OTTHUMG00000022283.1 1353 1353 1 ENSG00000125356.6 NDUFA1 chrX 119871487 119876662 + protein_coding KNOWN OTTHUMG00000022287.1 5176 766 3 ENSG00000186471.11 AKAP14 chrX 119895837 119920716 + protein_coding KNOWN OTTHUMG00000022285.1 24880 1170 23 ENSG00000101882.8 NKAP chrX 119920672 119943772 - protein_coding KNOWN OTTHUMG00000022284.2 23101 7894 21 ENSG00000234493.1 GS1-421I3.2 chrX 120010718 120015544 - lincRNA NOVEL OTTHUMG00000022289.1 4827 772 4 ENSG00000258545.4 RP4-755D9.1 chrX 120036236 120146854 + antisense NOVEL OTTHUMG00000171158.1 110619 2495 11 ENSG00000235997.2 AC109642.1 chr2 30346659 30352431 + lincRNA NOVEL OTTHUMG00000152052.3 5773 2952 2 ENSG00000277663.1 GS1-421I3.5 chrX 120070672 120071369 - lincRNA NOVEL OTTHUMG00000171156.1 698 698 1 ENSG00000203989.3 RHOXF2B chrX 120072264 120077705 - protein_coding KNOWN OTTHUMG00000022288.3 5442 1272 4 ENSG00000101883.4 RHOXF1 chrX 120109053 120115937 - protein_coding KNOWN OTTHUMG00000022290.2 6885 769 3 ENSG00000228139.1 LINC01402 chrX 120117642 120119700 - lincRNA NOVEL OTTHUMG00000022291.1 2059 279 3 ENSG00000233382.6 NKAPP1 chrX 120120953 120245267 - transcribed_processed_pseudogene KNOWN OTTHUMG00000022295.5 124315 3222 13 ENSG00000131721.4 RHOXF2 chrX 120158561 120164039 + protein_coding KNOWN OTTHUMG00000022296.2 5479 1309 4 ENSG00000227541.1 RP3-525N14.2 chrX 120202061 120202748 - processed_pseudogene KNOWN OTTHUMG00000022293.1 688 688 1 ENSG00000237757.2 EEF1A1P30 chrX 120210461 120212680 - processed_pseudogene KNOWN OTTHUMG00000022294.2 2220 1315 4 ENSG00000177485.6 ZBTB33 chrX 120250752 120258398 + protein_coding KNOWN OTTHUMG00000171159.2 7647 5313 5 ENSG00000125355.14 TMEM255A chrX 120258650 120311556 - protein_coding KNOWN OTTHUMG00000022298.2 52907 3858 39 ENSG00000280154.1 RP11-182E7.1 chr2 30408170 30408346 + TEC KNOWN OTTHUMG00000175789.1 177 177 1 ENSG00000232042.1 RP11-45J1.1 chrX 120273127 120273526 + processed_pseudogene KNOWN OTTHUMG00000022297.1 400 400 1 ENSG00000101892.10 ATP1B4 chrX 120362085 120383249 + protein_coding KNOWN OTTHUMG00000022299.1 21165 4773 23 ENSG00000005893.14 LAMP2 chrX 120427827 120469365 - protein_coding KNOWN OTTHUMG00000022301.4 41539 5526 34 ENSG00000251707.2 RNU7-37P chrX 120503037 120503096 - snRNA KNOWN NA 60 60 1 ENSG00000158290.15 CUL4B chrX 120524609 120575794 - protein_coding KNOWN OTTHUMG00000022302.1 51186 7031 82 ENSG00000232119.6 MCTS1 chrX 120594010 120621074 + protein_coding KNOWN OTTHUMG00000022303.2 27065 2837 31 ENSG00000171155.7 C1GALT1C1 chrX 120625793 120630150 - protein_coding KNOWN OTTHUMG00000022305.1 4358 1785 5 ENSG00000278317.1 RP4-655L22.5 chrX 120709061 120709392 - processed_pseudogene KNOWN OTTHUMG00000188071.1 332 294 2 ENSG00000181511.5 RP4-655L22.4 chrX 120733094 120733396 + processed_pseudogene KNOWN OTTHUMG00000022306.1 303 303 1 ENSG00000237828.1 PA2G4P1 chrX 120868611 120869807 - processed_pseudogene KNOWN OTTHUMG00000022307.1 1197 1197 1 ENSG00000221377.1 AC073255.1 chr2 30432353 30432448 - miRNA NOVEL NA 96 96 1 ENSG00000236446.3 CT47B1 chrX 120872603 120875929 - protein_coding KNOWN OTTHUMG00000187483.3 3327 1328 3 ENSG00000271346.1 RP1-321E8.4 chrX 120876552 120876805 + processed_pseudogene KNOWN OTTHUMG00000184981.1 254 254 1 ENSG00000230347.4 CT47A8 chrX 120877490 120951744 - protein_coding KNOWN OTTHUMG00000022318.2 74255 1595 6 ENSG00000278646.1 RP1-321E8.5 chrX 120877496 120878924 - protein_coding NOVEL OTTHUMG00000188842.1 1429 291 2 ENSG00000226685.4 CT47A12 chrX 120930250 120932301 - protein_coding KNOWN OTTHUMG00000188843.2 2052 1165 2 ENSG00000270678.1 RP6-166C19.21 chrX 120932901 120933152 + processed_pseudogene KNOWN OTTHUMG00000184966.1 252 252 1 ENSG00000226929.3 CT47A11 chrX 120933840 120937158 - protein_coding KNOWN OTTHUMG00000022310.2 3319 1294 3 ENSG00000270493.1 RP6-166C19.22 chrX 120937762 120938015 + processed_pseudogene KNOWN OTTHUMG00000184967.1 254 254 1 ENSG00000224089.3 CT47A10 chrX 120938701 120942023 - protein_coding KNOWN OTTHUMG00000022309.2 3323 1298 3 ENSG00000271154.1 RP6-166C19.23 chrX 120942623 120942875 + processed_pseudogene KNOWN OTTHUMG00000184968.1 253 253 1 ENSG00000172954.12 LCLAT1 chr2 30447226 30644225 + protein_coding KNOWN OTTHUMG00000099349.6 197000 7517 62 ENSG00000226600.3 CT47A9 chrX 120943561 120946883 - protein_coding KNOWN OTTHUMG00000022319.2 3323 1298 3 ENSG00000271041.1 RP6-166C19.18 chrX 120947483 120947735 + processed_pseudogene KNOWN OTTHUMG00000184969.1 253 253 1 ENSG00000270397.1 RP6-166C19.16 chrX 120952344 120952595 + processed_pseudogene KNOWN OTTHUMG00000184970.1 252 252 1 ENSG00000226023.5 CT47A6 chrX 120953282 120961487 - protein_coding KNOWN OTTHUMG00000022316.2 8206 1595 6 ENSG00000228517.2 CT47A7 chrX 120953288 120956600 - protein_coding KNOWN OTTHUMG00000022317.1 3313 1288 3 ENSG00000271502.1 RP6-166C19.17 chrX 120957227 120957479 + processed_pseudogene KNOWN OTTHUMG00000184971.1 253 253 1 ENSG00000237957.5 CT47A5 chrX 120958165 120966348 - protein_coding KNOWN OTTHUMG00000022315.2 8184 1595 6 ENSG00000271211.1 RP6-166C19.20 chrX 120962087 120962339 + processed_pseudogene KNOWN OTTHUMG00000184972.1 253 253 1 ENSG00000270736.1 RP6-166C19.19 chrX 120966948 120967199 + processed_pseudogene KNOWN OTTHUMG00000184973.1 252 252 1 ENSG00000230594.3 CT47A4 chrX 120967886 120971208 - protein_coding KNOWN OTTHUMG00000022314.2 3323 1298 3 ENSG00000280462.1 Clostridiales-1 chr2 30494502 30494619 - sRNA NOVEL NA 118 118 1 ENSG00000270771.1 RP6-166C19.12 chrX 120971808 120972059 + processed_pseudogene KNOWN OTTHUMG00000184946.1 252 252 1 ENSG00000236126.3 CT47A3 chrX 120972746 120976068 - protein_coding KNOWN OTTHUMG00000022313.2 3323 1298 3 ENSG00000270646.1 RP6-166C19.15 chrX 120976668 120976919 + processed_pseudogene KNOWN OTTHUMG00000184974.1 252 252 1 ENSG00000242362.2 CT47A2 chrX 120977606 120980928 - protein_coding KNOWN OTTHUMG00000022312.2 3323 1298 3 ENSG00000270456.1 RP6-166C19.14 chrX 120981529 120981779 + processed_pseudogene KNOWN OTTHUMG00000184975.1 251 251 1 ENSG00000236371.4 CT47A1 chrX 120982466 120985788 - protein_coding KNOWN OTTHUMG00000022311.2 3323 1298 3 ENSG00000270251.1 RP6-166C19.13 chrX 120986388 120986639 + processed_pseudogene KNOWN OTTHUMG00000184976.1 252 252 1 ENSG00000233433.1 RP1-296G17.3 chrX 121024964 121026563 - processed_pseudogene KNOWN OTTHUMG00000022321.1 1600 1600 1 ENSG00000182890.4 GLUD2 chrX 121047588 121050080 + protein_coding KNOWN OTTHUMG00000022320.1 2493 2493 1 ENSG00000234176.1 HSPA8P1 chrX 121203182 121205014 - processed_pseudogene KNOWN OTTHUMG00000022322.1 1833 1833 1 ENSG00000281330.1 Y_RNA chr1 17158197 17158284 + misc_RNA NOVEL NA 88 88 1 ENSG00000278908.1 RP11-523J2.1 chr2 30677762 30679895 + TEC KNOWN OTTHUMG00000175792.2 2134 2134 1 ENSG00000212032.2 AC007486.1 chrX 121332554 121332638 - miRNA NOVEL NA 85 85 1 ENSG00000265456.1 MIR3672 chrX 121370972 121371053 + miRNA KNOWN NA 82 82 1 ENSG00000213498.3 TPT1P13 chrX 121863698 121864196 - processed_pseudogene KNOWN OTTHUMG00000022323.1 499 499 1 ENSG00000221217.2 AL359851.1 chrX 121868867 121868956 + miRNA NOVEL NA 90 90 1 ENSG00000260585.1 RP13-192B19.2 chrX 121871869 121876865 + lincRNA NOVEL OTTHUMG00000176478.1 4997 4997 1 ENSG00000237891.1 RP11-417D4.1 chrX 122010976 122011612 - processed_pseudogene KNOWN OTTHUMG00000022324.1 637 251 2 ENSG00000280142.1 RP13-16D10.1 chrX 122242008 122242616 + TEC KNOWN OTTHUMG00000175550.1 609 609 1 ENSG00000221317.1 AL513487.1 chrX 122471725 122471818 - miRNA NOVEL NA 94 94 1 ENSG00000232496.2 RPL3P12 chrX 122538253 122539460 + processed_pseudogene KNOWN OTTHUMG00000022325.2 1208 1208 1 ENSG00000212321.2 U3 chrX 122840426 122840645 + snoRNA NOVEL NA 220 220 1 ENSG00000162949.15 CAPN13 chr2 30722771 30820542 - protein_coding KNOWN OTTHUMG00000152053.4 97772 5191 72 ENSG00000263845.2 AL109800.1 chrX 123017819 123017909 + miRNA NOVEL NA 91 91 1 ENSG00000224236.3 MRRFP1 chrX 123116107 123117781 - processed_pseudogene KNOWN OTTHUMG00000022326.1 1675 1675 1 ENSG00000125675.16 GRIA3 chrX 123184153 123490915 + protein_coding KNOWN OTTHUMG00000022685.3 306763 6484 82 ENSG00000265082.2 AL356213.1 chrX 123465093 123465177 + miRNA NOVEL NA 85 85 1 ENSG00000179101.5 RP11-349N19.2 chrX 123514473 123514872 + processed_pseudogene KNOWN OTTHUMG00000022327.1 400 400 1 ENSG00000229733.1 RP5-1189B24.1 chrX 123558350 123558584 + processed_pseudogene KNOWN OTTHUMG00000040087.1 235 235 1 ENSG00000228466.1 TUBB4AP1 chrX 123561642 123562966 + processed_pseudogene KNOWN OTTHUMG00000022330.3 1325 1325 1 ENSG00000125676.18 THOC2 chrX 123600561 123733056 - protein_coding KNOWN OTTHUMG00000022334.19 132496 10277 216 ENSG00000232149.1 FERP1 chrX 123603139 123603931 + processed_pseudogene KNOWN OTTHUMG00000022329.2 793 793 1 ENSG00000230376.1 MEMO1P4 chrX 123765301 123765686 + processed_pseudogene KNOWN OTTHUMG00000022332.6 386 386 1 ENSG00000230118.1 AC092569.2 chr2 30746444 30746701 - processed_pseudogene KNOWN OTTHUMG00000152113.1 258 258 1 ENSG00000252178.1 RNU7-69P chrX 123772078 123772139 - snRNA KNOWN NA 62 62 1 ENSG00000226902.1 CHCHD2P1 chrX 123785009 123785451 + processed_pseudogene KNOWN OTTHUMG00000022333.6 443 443 1 ENSG00000264933.2 RN7SL190P chrX 123811331 123811587 - misc_RNA KNOWN NA 257 257 1 ENSG00000199705.1 Y_RNA chrX 123857062 123857163 - misc_RNA NOVEL NA 102 102 1 ENSG00000101966.11 XIAP chrX 123859724 123913979 + protein_coding KNOWN OTTHUMG00000022336.6 54256 9025 54 ENSG00000237331.1 XIAP-AS1 chrX 123872626 123873932 - antisense NOVEL OTTHUMG00000022339.5 1307 482 2 ENSG00000252627.1 RNU6-122P chrX 123874459 123874565 + snRNA KNOWN NA 107 107 1 ENSG00000237025.1 RP1-315G1.1 chrX 123878590 123879296 - processed_pseudogene KNOWN OTTHUMG00000022337.1 707 707 1 ENSG00000232412.1 RP1-315G1.3 chrX 123959233 123961341 - lincRNA NOVEL OTTHUMG00000022338.2 2109 326 2 ENSG00000101972.17 STAG2 chrX 123960212 124422664 + protein_coding KNOWN OTTHUMG00000022725.12 462453 8187 261 ENSG00000158089.13 GALNT14 chr2 30910467 31155202 - protein_coding KNOWN OTTHUMG00000074077.2 244736 4567 134 ENSG00000237426.1 ZIK1P1 chrX 124173001 124174459 - processed_pseudogene KNOWN OTTHUMG00000022340.1 1459 1459 1 ENSG00000252693.1 SNORA40 chrX 124197743 124197849 + snoRNA NOVEL NA 107 107 1 ENSG00000234564.1 HSPA8P20 chrX 124204499 124205806 - processed_pseudogene KNOWN OTTHUMG00000022341.1 1308 1007 2 ENSG00000232054.1 NPM1P34 chrX 124280530 124281422 + processed_pseudogene KNOWN OTTHUMG00000022342.1 893 893 1 ENSG00000226532.1 RP5-1052M9.1 chrX 124326175 124326258 - processed_pseudogene KNOWN OTTHUMG00000040093.1 84 84 1 ENSG00000229825.1 RP5-1052M9.4 chrX 124332918 124333376 + processed_pseudogene KNOWN OTTHUMG00000022343.1 459 459 1 ENSG00000183918.13 SH2D1A chrX 124346344 124373155 + protein_coding KNOWN OTTHUMG00000022344.3 26812 2450 18 ENSG00000009694.12 TENM1 chrX 124375903 124963817 - protein_coding KNOWN OTTHUMG00000022721.1 587915 12896 67 ENSG00000236880.1 RP3-384D21.2 chrX 124688504 124688838 - processed_pseudogene KNOWN OTTHUMG00000022345.1 335 335 1 ENSG00000281303.1 AL008707.1 chrX 125199151 125199286 - miRNA NOVEL NA 136 136 1 ENSG00000234579.1 AC009305.1 chr2 30986939 30991426 + antisense NOVEL OTTHUMG00000152041.1 4488 368 2 ENSG00000232599.1 RP1-161N10.1 chrX 125203805 125204338 - processed_pseudogene KNOWN OTTHUMG00000022346.1 534 534 1 ENSG00000280699.1 SMAD5-AS1_2 chrX 125204378 125204511 - misc_RNA NOVEL NA 134 134 1 ENSG00000263886.1 AL953885.1 chrX 125287776 125287843 + miRNA NOVEL NA 68 68 1 ENSG00000278804.1 RP13-147D17.2 chrX 125320114 125323036 + unprocessed_pseudogene KNOWN OTTHUMG00000188068.1 2923 559 2 ENSG00000213489.3 RP13-147D17.1 chrX 125326897 125328021 - processed_pseudogene KNOWN OTTHUMG00000022347.2 1125 1125 1 ENSG00000222518.1 FO393407.1 chrX 125662904 125662994 + miRNA NOVEL NA 91 91 1 ENSG00000280223.1 RP1-138O17.1 chrX 126004446 126006118 - TEC KNOWN OTTHUMG00000175564.1 1673 1673 1 ENSG00000237208.1 RP11-13E5.2 chrX 126109762 126115562 + lincRNA NOVEL OTTHUMG00000022349.1 5801 639 3 ENSG00000198354.5 DCAF12L2 chrX 126164531 126165951 - protein_coding KNOWN OTTHUMG00000022348.1 1421 1421 1 ENSG00000230916.2 RP11-10B2.1 chrX 126471705 126472403 + processed_pseudogene KNOWN OTTHUMG00000022350.3 699 699 1 ENSG00000266310.2 AC009305.2 chr2 31092826 31092916 + miRNA NOVEL NA 91 91 1 ENSG00000231501.1 MTND4LP1 chrX 126472728 126472884 + processed_pseudogene KNOWN OTTHUMG00000022351.3 157 157 1 ENSG00000264338.1 AL359973.1 chrX 126472809 126472882 - miRNA NOVEL NA 74 74 1 ENSG00000232177.1 MTND4P24 chrX 126472885 126473281 + processed_pseudogene KNOWN OTTHUMG00000022352.1 397 397 1 ENSG00000274901.1 LL0XNC01-220B11.1 chrX 126502898 126503144 - processed_pseudogene KNOWN OTTHUMG00000188060.1 247 247 1 ENSG00000198889.4 DCAF12L1 chrX 126549383 126552851 - protein_coding KNOWN OTTHUMG00000022353.2 3469 3382 2 ENSG00000226414.1 RP11-375A20.1 chrX 126729104 126730226 + processed_pseudogene KNOWN OTTHUMG00000022354.1 1123 1123 1 ENSG00000263686.1 AL391375.1 chrX 126732436 126732520 - miRNA NOVEL NA 85 85 1 ENSG00000183631.4 PRR32 chrX 126819764 126821786 + protein_coding KNOWN OTTHUMG00000022355.1 2023 1228 2 ENSG00000274871.1 AL596243.1 chrX 126863514 126863581 - miRNA NOVEL NA 68 68 1 ENSG00000230538.1 RP3-428A13.1 chrX 127390342 127392526 + processed_pseudogene KNOWN OTTHUMG00000022356.1 2185 2135 2 ENSG00000214711.8 CAPN14 chr2 31173056 31233858 - protein_coding KNOWN OTTHUMG00000152039.2 60803 4014 44 ENSG00000280275.1 RP3-428A13.2 chrX 127392760 127394771 + TEC KNOWN OTTHUMG00000175563.1 2012 2012 1 ENSG00000274631.1 RP11-368E13.1 chrX 127623410 127623530 - processed_pseudogene KNOWN OTTHUMG00000188063.1 121 121 1 ENSG00000260683.1 CTD-2076M15.1 chrX 127660631 127662530 - lincRNA NOVEL OTTHUMG00000175443.1 1900 1900 1 ENSG00000235274.1 RP1-107N3.1 chrX 127728734 127730858 - processed_pseudogene KNOWN OTTHUMG00000022357.1 2125 1167 3 ENSG00000224548.1 RP1-107N3.2 chrX 127796124 127796733 + processed_pseudogene KNOWN OTTHUMG00000022358.1 610 314 2 ENSG00000123165.8 ACTRT1 chrX 128050962 128052398 - protein_coding KNOWN OTTHUMG00000022359.1 1437 1437 1 ENSG00000236042.2 RP1-203C2.2 chrX 128098032 128098529 - processed_pseudogene KNOWN OTTHUMG00000022360.2 498 498 1 ENSG00000235334.1 RP1-203C2.3 chrX 128122734 128123496 + processed_pseudogene KNOWN OTTHUMG00000022361.1 763 716 2 ENSG00000235239.1 RP1-203C2.4 chrX 128127090 128128212 - processed_pseudogene KNOWN OTTHUMG00000022362.1 1123 1123 1 ENSG00000235735.1 RPL7AP72 chrX 128313281 128314048 + processed_pseudogene KNOWN OTTHUMG00000022363.1 768 768 1 ENSG00000201671.1 RNA5SP90 chr2 31228312 31228410 + rRNA KNOWN NA 99 99 1 ENSG00000276801.1 Z70272.1 chrX 128319027 128319080 - miRNA NOVEL NA 54 54 1 ENSG00000225689.1 RP1-30E17.2 chrX 128323620 128600468 - lincRNA NOVEL OTTHUMG00000022365.1 276849 481 4 ENSG00000226802.1 RP11-72I18.1 chrX 128440929 128441785 + processed_pseudogene KNOWN OTTHUMG00000022364.1 857 857 1 ENSG00000218728.3 KRT18P44 chrX 128714506 128715790 + processed_pseudogene KNOWN OTTHUMG00000022366.2 1285 1285 1 ENSG00000223995.2 RPL32P35 chrX 128838441 128838834 - processed_pseudogene KNOWN OTTHUMG00000022367.2 394 394 1 ENSG00000234592.1 RP11-41L14.1 chrX 129041536 129043183 - processed_pseudogene KNOWN OTTHUMG00000022368.1 1648 1648 1 ENSG00000226339.1 RPS26P56 chrX 129408382 129408621 + processed_pseudogene KNOWN OTTHUMG00000022369.1 240 240 1 ENSG00000201518.1 RNA5SP513 chrX 129436530 129436647 - rRNA KNOWN NA 118 118 1 ENSG00000102038.14 SMARCA1 chrX 129446501 129523500 - protein_coding KNOWN OTTHUMG00000022370.4 77000 4363 103 ENSG00000252170.2 SNORD112 chrX 129518576 129518647 + snoRNA NOVEL NA 72 72 1 ENSG00000013016.13 EHD3 chr2 31234337 31269447 + protein_coding KNOWN OTTHUMG00000099365.1 35111 4636 13 ENSG00000122126.14 OCRL chrX 129539849 129592561 + protein_coding KNOWN OTTHUMG00000022706.3 52713 5779 57 ENSG00000171388.11 APLN chrX 129645259 129654937 - protein_coding KNOWN OTTHUMG00000022371.2 9679 3205 3 ENSG00000122121.9 XPNPEP2 chrX 129738974 129769538 + protein_coding KNOWN OTTHUMG00000022373.1 30565 3500 27 ENSG00000122122.9 SASH3 chrX 129779979 129795201 + protein_coding KNOWN OTTHUMG00000022372.1 15223 2711 10 ENSG00000240143.1 RP4-753P9.3 chrX 129794994 129796963 + 3prime_overlapping_ncrna NOVEL OTTHUMG00000022374.1 1970 326 3 ENSG00000275070.1 Metazoa_SRP chrX 129796491 129796783 - misc_RNA NOVEL NA 293 293 1 ENSG00000188706.11 ZDHHC9 chrX 129803288 129843909 - protein_coding KNOWN OTTHUMG00000022375.1 40622 5243 34 ENSG00000235189.1 RP4-537K23.4 chrX 129869064 129957528 - antisense NOVEL OTTHUMG00000022377.1 88465 526 4 ENSG00000238040.1 SALL4P2 chrX 129871309 129877567 + processed_pseudogene KNOWN OTTHUMG00000022376.1 6259 2910 3 ENSG00000156697.11 UTP14A chrX 129906121 129929761 + protein_coding KNOWN OTTHUMG00000022378.1 23641 4087 38 ENSG00000213620.3 AL121657.4 chr2 31290762 31291604 + processed_pseudogene KNOWN OTTHUMG00000152040.1 843 531 2 ENSG00000085185.14 BCORL1 chrX 129981107 130058083 + protein_coding KNOWN OTTHUMG00000022379.5 76977 7996 49 ENSG00000102034.15 ELF4 chrX 130064874 130110716 - protein_coding KNOWN OTTHUMG00000022390.1 45843 4316 33 ENSG00000156709.12 AIFM1 chrX 130129362 130165887 - protein_coding KNOWN OTTHUMG00000022392.4 36526 3306 111 ENSG00000134594.4 RAB33A chrX 130171649 130184870 + protein_coding KNOWN OTTHUMG00000022391.1 13222 1258 2 ENSG00000056277.14 ZNF280C chrX 130202711 130268899 - protein_coding KNOWN OTTHUMG00000022393.2 66189 4634 33 ENSG00000202304.1 RNU6-1130P chrX 130310072 130310178 - snRNA KNOWN NA 107 107 1 ENSG00000225046.2 RP1-20I3.3 chrX 130330857 130331069 + processed_pseudogene KNOWN OTTHUMG00000022396.2 213 213 1 ENSG00000102078.14 SLC25A14 chrX 130339888 130373361 + protein_coding KNOWN OTTHUMG00000022394.1 33474 3009 117 ENSG00000147262.3 GPR119 chrX 130384440 130385447 - protein_coding KNOWN OTTHUMG00000022397.1 1008 1008 1 ENSG00000134597.12 RBMX2 chrX 130401969 130413343 + protein_coding KNOWN OTTHUMG00000022395.1 11375 2487 22 ENSG00000204362.5 RP11-380J14.1 chr1 17189783 17197617 + lincRNA KNOWN OTTHUMG00000002291.1 7835 4676 3 ENSG00000158125.8 XDH chr2 31334321 31414715 - protein_coding KNOWN OTTHUMG00000099385.3 80395 6037 45 ENSG00000274775.1 RP1-274L7.4 chrX 130445085 130475614 - unprocessed_pseudogene KNOWN OTTHUMG00000188056.1 30530 17936 16 ENSG00000229702.1 RP1-274L7.1 chrX 130477069 130524257 - lincRNA NOVEL OTTHUMG00000022398.1 47189 1646 12 ENSG00000221930.6 FAM45B chrX 130494965 130496588 + transcribed_processed_pseudogene KNOWN OTTHUMG00000022399.3 1624 1624 2 ENSG00000271677.1 RP1-274L7.3 chrX 130545586 130546474 + unprocessed_pseudogene KNOWN OTTHUMG00000185094.2 889 398 2 ENSG00000165675.15 ENOX2 chrX 130623369 130903317 - protein_coding KNOWN OTTHUMG00000022401.2 279949 4279 84 ENSG00000238188.1 RP5-875H3.2 chrX 130645723 130646325 + processed_pseudogene KNOWN OTTHUMG00000022400.1 603 603 1 ENSG00000228659.1 LINC01201 chrX 130981590 131058146 - antisense NOVEL OTTHUMG00000022403.1 76557 561 5 ENSG00000147256.9 ARHGAP36 chrX 131058242 131089883 + protein_coding KNOWN OTTHUMG00000022402.2 31642 3173 51 ENSG00000241198.3 RN7SL191P chrX 131134086 131134390 - misc_RNA KNOWN NA 305 305 1 ENSG00000237650.1 OR11Q1P chrX 131204128 131205004 + processed_pseudogene KNOWN OTTHUMG00000022404.1 877 877 1 ENSG00000277893.1 SRD5A2 chr2 31522480 31581067 - protein_coding KNOWN OTTHUMG00000152057.3 58588 4648 5 ENSG00000276205.1 RP11-529O20.2 chrX 131221196 131221436 - unprocessed_pseudogene KNOWN OTTHUMG00000188052.1 241 241 1 ENSG00000147255.16 IGSF1 chrX 131273506 131399703 - protein_coding KNOWN OTTHUMG00000022406.1 126198 6818 99 ENSG00000185903.9 OR11N1P chrX 131324398 131325250 - processed_pseudogene KNOWN OTTHUMG00000022405.1 853 853 1 ENSG00000229082.1 OR5AW1P chrX 131341447 131342452 - processed_pseudogene KNOWN OTTHUMG00000153220.1 1006 1006 1 ENSG00000242610.1 OR5BH1P chrX 131398054 131398972 - processed_pseudogene KNOWN OTTHUMG00000022407.1 919 919 1 ENSG00000216047.2 AL135784.1 chrX 131404510 131404602 - miRNA NOVEL NA 93 93 1 ENSG00000234288.1 OR1AA1P chrX 131424299 131425214 + processed_pseudogene KNOWN OTTHUMG00000022408.1 916 916 1 ENSG00000230973.1 RP1-154J13.2 chrX 131437055 131437670 - processed_pseudogene KNOWN OTTHUMG00000022409.1 616 616 1 ENSG00000228450.2 RP1-154J13.3 chrX 131492279 131492886 - processed_pseudogene KNOWN OTTHUMG00000022410.2 608 608 1 ENSG00000171054.7 OR13H1 chrX 131544074 131545000 + protein_coding KNOWN OTTHUMG00000022411.1 927 927 1 ENSG00000228563.1 AL133247.2 chr2 31526942 31563464 + antisense NOVEL OTTHUMG00000152058.1 36523 646 3 ENSG00000237225.1 OR13K1P chrX 131562738 131563834 + processed_pseudogene KNOWN OTTHUMG00000022412.1 1097 975 2 ENSG00000232787.1 OR7L1P chrX 131596139 131596838 + processed_pseudogene KNOWN OTTHUMG00000022413.1 700 380 2 ENSG00000235730.1 OR2AF1P chrX 131619021 131619909 + processed_pseudogene KNOWN OTTHUMG00000022414.1 889 889 1 ENSG00000227183.3 HDGFP1 chrX 131646639 131646890 + processed_pseudogene KNOWN OTTHUMG00000022415.3 252 252 1 ENSG00000213468.3 FIRRE chrX 131702650 131830643 - lincRNA NOVEL OTTHUMG00000022417.1 127994 2928 13 ENSG00000241418.1 FAM195CP chrX 131795657 131796167 - processed_pseudogene KNOWN OTTHUMG00000022416.1 511 511 1 ENSG00000228089.1 PNKDP1 chrX 131803312 131803741 - processed_pseudogene KNOWN OTTHUMG00000022418.1 430 430 1 ENSG00000235190.1 RP1-197O17.3 chrX 131937670 131937853 + processed_pseudogene KNOWN OTTHUMG00000022419.1 184 184 1 ENSG00000200587.1 RNA5SP514 chrX 131938846 131938956 - rRNA KNOWN NA 111 111 1 ENSG00000265686.1 KF459411.1 chrX 131996845 131996933 + miRNA NOVEL NA 89 89 1 ENSG00000270422.1 AL133247.3 chr2 31651381 31651862 + processed_pseudogene KNOWN OTTHUMG00000184338.1 482 482 1 ENSG00000134602.14 STK26 chrX 132023265 132075943 + protein_coding KNOWN OTTHUMG00000022420.2 52679 3354 57 ENSG00000165694.8 FRMD7 chrX 132076993 132128020 - protein_coding KNOWN OTTHUMG00000022421.2 51028 3324 32 ENSG00000228819.1 RP1-305B16.3 chrX 132130091 132131352 - processed_pseudogene KNOWN OTTHUMG00000022423.1 1262 1262 1 ENSG00000123728.8 RAP2C chrX 132203024 132219480 - protein_coding KNOWN OTTHUMG00000022424.1 16457 4118 23 ENSG00000232160.5 RAP2C-AS1 chrX 132217147 132432862 + antisense NOVEL OTTHUMG00000022425.2 215716 3536 6 ENSG00000076770.13 MBNL3 chrX 132369317 132489968 - protein_coding KNOWN OTTHUMG00000022426.4 120652 12199 82 ENSG00000277353.1 AL050310.1 chrX 132435097 132435189 - miRNA NOVEL NA 93 93 1 ENSG00000206900.1 RNU6-98P chrX 132580117 132580223 - snRNA KNOWN NA 107 107 1 ENSG00000171004.16 HS6ST2 chrX 132626016 132961395 - protein_coding KNOWN OTTHUMG00000022430.8 335380 4948 20 ENSG00000235849.1 HS6ST2-AS1 chrX 132667642 132669888 + antisense NOVEL OTTHUMG00000022427.1 2247 550 3 ENSG00000223647.1 AL133249.1 chr2 31793823 31803980 - lincRNA NOVEL OTTHUMG00000152056.1 10158 418 5 ENSG00000277433.1 Z82205.1 chrX 132890379 132890470 - miRNA NOVEL NA 92 92 1 ENSG00000227064.1 RP3-363L9.1 chrX 132907279 132907575 - processed_pseudogene KNOWN OTTHUMG00000022428.1 297 297 1 ENSG00000134588.11 USP26 chrX 133024631 133097109 - protein_coding KNOWN OTTHUMG00000022429.3 72479 4145 13 ENSG00000225949.1 RP3-358H7.1 chrX 133141300 133143940 - processed_pseudogene KNOWN OTTHUMG00000022432.1 2641 1175 4 ENSG00000281231.1 Z77249.1 chrX 133152752 133152818 + miRNA NOVEL NA 67 67 1 ENSG00000207100.1 SNORA8 chrX 133152754 133152892 + snoRNA NOVEL NA 139 139 1 ENSG00000183434.9 TFDP3 chrX 133216669 133218348 - protein_coding KNOWN OTTHUMG00000022433.1 1680 1680 1 ENSG00000202199.1 RNU1-115P chrX 133238657 133238816 - snRNA KNOWN NA 160 160 1 ENSG00000076716.8 GPC4 chrX 133300103 133415490 - protein_coding KNOWN OTTHUMG00000022434.1 115388 4960 9 ENSG00000206765.1 RNU6-203P chrX 133531723 133531826 - snRNA KNOWN NA 104 104 1 ENSG00000238448.1 AL121652.2 chr2 31810195 31810288 - miRNA NOVEL NA 94 94 1 ENSG00000147257.12 GPC3 chrX 133535745 133985895 - protein_coding KNOWN OTTHUMG00000022448.2 450151 2711 29 ENSG00000227008.2 RP3-417G15.1 chrX 133670971 133671386 + processed_pseudogene KNOWN OTTHUMG00000022439.1 416 416 1 ENSG00000211495.1 AL009174.1 chrX 133746748 133746846 - miRNA NOVEL NA 99 99 1 ENSG00000233260.1 RPSAP63 chrX 133762796 133763683 + processed_pseudogene KNOWN OTTHUMG00000022445.1 888 888 1 ENSG00000232068.1 AF003529.2 chrX 133989443 133990086 + unprocessed_pseudogene KNOWN OTTHUMG00000022447.1 644 644 1 ENSG00000200572.1 Y_RNA chrX 134142228 134142340 - misc_RNA NOVEL NA 113 113 1 ENSG00000224908.1 TIMM8BP2 chrX 134166682 134166932 + processed_pseudogene KNOWN OTTHUMG00000022449.2 251 251 1 ENSG00000207572.2 MIR363 chrX 134169361 134169473 - miRNA KNOWN NA 113 113 1 ENSG00000208034.1 MIR92A2 chrX 134169538 134169612 - miRNA KNOWN NA 75 75 1 ENSG00000207812.2 MIR19B2 chrX 134169671 134169767 - miRNA KNOWN NA 97 97 1 ENSG00000237007.4 KRT18P52 chr2 31822591 31823436 - processed_pseudogene KNOWN OTTHUMG00000152055.1 846 846 1 ENSG00000207710.1 MIR20B chrX 134169809 134169877 - miRNA KNOWN NA 69 69 1 ENSG00000239594.3 AC002407.1 chrX 134170017 134170125 - miRNA NOVEL NA 109 109 1 ENSG00000207602.1 MIR106A chrX 134170198 134170278 - miRNA KNOWN NA 81 81 1 ENSG00000232664.2 LARP1BP3 chrX 134204353 134205916 + processed_pseudogene KNOWN OTTHUMG00000022450.2 1564 869 2 ENSG00000203952.8 CCDC160 chrX 134237047 134246207 + protein_coding KNOWN OTTHUMG00000164183.2 9161 1790 5 ENSG00000214961.2 RP11-355K23B.1 chrX 134272287 134273658 + processed_pseudogene KNOWN OTTHUMG00000022451.1 1372 1372 1 ENSG00000156531.15 PHF6 chrX 134373253 134428791 + protein_coding KNOWN OTTHUMG00000022453.2 55539 8016 49 ENSG00000251962.1 AL591668.1 chrX 134403298 134403382 - miRNA NOVEL NA 85 85 1 ENSG00000165704.13 HPRT1 chrX 134460153 134520513 + protein_coding KNOWN OTTHUMG00000022452.1 60361 1624 25 ENSG00000226107.1 AC004383.3 chrX 134522702 134522990 + processed_pseudogene KNOWN OTTHUMG00000022454.1 289 289 1 ENSG00000265267.1 AL121652.3 chr2 31823018 31823106 - miRNA NOVEL NA 89 89 1 ENSG00000216001.2 MIR450B chrX 134540161 134540272 - miRNA KNOWN NA 112 112 1 ENSG00000199132.1 MIR450A1 chrX 134540341 134540431 - miRNA KNOWN NA 91 91 1 ENSG00000207755.2 MIR450A2 chrX 134540495 134540605 - miRNA KNOWN NA 111 111 1 ENSG00000207784.2 MIR542 chrX 134541344 134541455 - miRNA KNOWN NA 112 112 1 ENSG00000223749.6 MIR503HG chrX 134543337 134546632 - lincRNA NOVEL OTTHUMG00000022455.1 3296 1678 13 ENSG00000208005.1 MIR503 chrX 134546328 134546398 - miRNA KNOWN NA 71 71 1 ENSG00000274784.1 MIR424 chrX 134546611 134546721 - miRNA KNOWN NA 111 111 1 ENSG00000227060.5 LINC00629 chrX 134549973 134559923 + lincRNA NOVEL OTTHUMG00000022456.2 9951 909 6 ENSG00000170965.8 PLAC1 chrX 134565838 134764322 - protein_coding KNOWN OTTHUMG00000022457.1 198485 1916 12 ENSG00000235813.1 RP11-308B5.2 chrX 134599457 134606254 + lincRNA NOVEL OTTHUMG00000022458.1 6798 938 4 ENSG00000242272.1 AK2P2 chr2 31823413 31823817 - processed_pseudogene KNOWN OTTHUMG00000152054.1 405 405 1 ENSG00000236509.2 RPL21P133 chrX 134607157 134607632 + processed_pseudogene KNOWN OTTHUMG00000022459.2 476 476 1 ENSG00000237432.2 RPS7P12 chrX 134650830 134651411 + processed_pseudogene KNOWN OTTHUMG00000022460.2 582 582 1 ENSG00000199920.1 RNU4-44P chrX 134760208 134760348 - snRNA KNOWN NA 141 141 1 ENSG00000156504.15 FAM122B chrX 134769566 134797232 - protein_coding KNOWN OTTHUMG00000022461.3 27667 4404 74 ENSG00000156500.13 FAM122C chrX 134796789 134854610 + protein_coding KNOWN OTTHUMG00000022716.1 57822 5894 55 ENSG00000280249.1 AL691477.1 chrX 134799782 134799945 - pseudogene NOVEL NA 164 162 2 ENSG00000101928.11 MOSPD1 chrX 134887626 134915267 - protein_coding KNOWN OTTHUMG00000035315.2 27642 2675 31 ENSG00000221299.1 Z83826.1 chrX 134895754 134895842 + miRNA NOVEL NA 89 89 1 ENSG00000207081.1 RNU6-616P chrX 134918310 134918416 - snRNA KNOWN NA 107 107 1 ENSG00000236091.1 RP3-473B4.3 chrX 134949549 134953382 + lincRNA NOVEL OTTHUMG00000022462.1 3834 961 3 ENSG00000273165.1 RP11-1057B6.1 chr2 31852976 31853423 - lincRNA NOVEL OTTHUMG00000185839.1 448 448 1 ENSG00000231929.2 HMGB3P31 chrX 134961711 134962305 - processed_pseudogene KNOWN OTTHUMG00000022463.1 595 595 1 ENSG00000184785.5 SMIM10 chrX 134990938 134992473 + protein_coding KNOWN OTTHUMG00000187484.1 1536 1536 1 ENSG00000212747.4 FAM127C chrX 135020504 135022529 - protein_coding KNOWN OTTHUMG00000022464.3 2026 2026 1 ENSG00000134590.12 FAM127A chrX 135032366 135033546 + protein_coding KNOWN OTTHUMG00000022465.3 1181 1181 5 ENSG00000203950.6 FAM127B chrX 135050932 135052196 - protein_coding KNOWN OTTHUMG00000022466.3 1265 1265 7 ENSG00000228372.6 RP11-85L21.4 chrX 135059685 135123952 + lincRNA NOVEL OTTHUMG00000022470.2 64268 1077 6 ENSG00000234228.1 NCLP2 chrX 135075136 135076597 - processed_pseudogene KNOWN OTTHUMG00000022467.1 1462 1462 1 ENSG00000196972.7 LINC00087 chrX 135095028 135098634 - lincRNA KNOWN OTTHUMG00000022468.2 3607 2696 2 ENSG00000224107.4 LINC00633 chrX 135118955 135120526 - lincRNA NOVEL OTTHUMG00000022469.1 1572 700 5 ENSG00000223809.1 RP11-85L21.6 chrX 135123239 135123604 - lincRNA NOVEL OTTHUMG00000022472.1 366 250 2 ENSG00000142623.9 PADI1 chr1 17205126 17246005 + protein_coding KNOWN OTTHUMG00000002294.3 40880 4903 22 ENSG00000162959.12 MEMO1 chr2 31865060 32011230 - protein_coding KNOWN OTTHUMG00000128453.6 146171 5220 59 ENSG00000232582.1 RP11-85L21.5 chrX 135135149 135135770 - processed_pseudogene KNOWN OTTHUMG00000022471.1 622 622 1 ENSG00000169551.11 CT55 chrX 135156536 135171398 - protein_coding KNOWN OTTHUMG00000022473.1 14863 1732 11 ENSG00000236491.1 RP13-565O16.2 chrX 135180255 135194679 - unprocessed_pseudogene KNOWN OTTHUMG00000022474.1 14425 730 6 ENSG00000228922.1 RP13-210D15.1 chrX 135201731 135215232 + unprocessed_pseudogene KNOWN OTTHUMG00000022475.1 13502 597 4 ENSG00000264894.1 AC234771.1 chrX 135206561 135206646 + miRNA NOVEL NA 86 86 1 ENSG00000269833.2 RP11-11A5.1 chrX 135236895 135237408 + processed_pseudogene KNOWN OTTHUMG00000188610.1 514 514 1 ENSG00000186376.13 ZNF75D chrX 135248920 135344087 - protein_coding KNOWN OTTHUMG00000022482.1 95168 6819 17 ENSG00000238210.2 RP13-210D15.4 chrX 135252576 135253583 + lincRNA NOVEL OTTHUMG00000022476.1 1008 604 4 ENSG00000274024.1 RP13-210D15.8 chrX 135297046 135298585 + processed_pseudogene KNOWN OTTHUMG00000188048.1 1540 1136 2 ENSG00000173275.11 ZNF449 chrX 135344796 135363152 + protein_coding KNOWN OTTHUMG00000022478.1 18357 5330 7 ENSG00000162961.12 DPY30 chr2 31867809 32039812 - protein_coding KNOWN OTTHUMG00000128457.3 172004 2745 46 ENSG00000229015.1 RP11-265D19.6 chrX 135396429 135397764 + lincRNA NOVEL OTTHUMG00000022481.1 1336 405 2 ENSG00000178947.8 LINC00086 chrX 135421943 135428074 + lincRNA KNOWN OTTHUMG00000022479.2 6132 5230 2 ENSG00000201440.1 RNA5SP515 chrX 135428168 135428285 - rRNA KNOWN NA 118 118 1 ENSG00000225769.1 CROCCP1 chrX 135432960 135438634 + processed_pseudogene KNOWN OTTHUMG00000022480.2 5675 5675 1 ENSG00000273988.1 RP11-265D19.8 chrX 135445897 135447368 - unprocessed_pseudogene KNOWN OTTHUMG00000188049.1 1472 367 3 ENSG00000271158.1 RP11-265D19.7 chrX 135464329 135465484 - processed_pseudogene KNOWN OTTHUMG00000185069.1 1156 1156 1 ENSG00000225235.1 DDX26B-AS1 chrX 135520083 135520674 - antisense NOVEL OTTHUMG00000022483.1 592 398 2 ENSG00000165359.13 DDX26B chrX 135520659 135582510 + protein_coding KNOWN OTTHUMG00000022484.2 61852 7177 57 ENSG00000264284.1 AL391380.1 chrX 135568567 135568666 - miRNA NOVEL NA 100 100 1 ENSG00000237833.1 RP11-432N13.2 chrX 135583651 135585160 - processed_pseudogene KNOWN OTTHUMG00000022485.1 1510 1432 2 ENSG00000221326.1 AL121652.1 chr2 31919862 31919949 - miRNA NOVEL NA 88 88 1 ENSG00000224539.1 SAGE4P chrX 135598927 135615431 + unprocessed_pseudogene KNOWN OTTHUMG00000022486.1 16505 3381 24 ENSG00000277486.1 SAGE3P chrX 135637623 135642756 - unprocessed_pseudogene KNOWN OTTHUMG00000188050.1 5134 1635 12 ENSG00000198022.6 SAGE2P chrX 135673591 135686151 - unprocessed_pseudogene KNOWN OTTHUMG00000022487.2 12561 2126 15 ENSG00000274601.1 WI2-88277B6.1 chrX 135710095 135710377 - unprocessed_pseudogene KNOWN OTTHUMG00000188051.1 283 283 1 ENSG00000268940.4 CT45A1 chrX 135713453 135723539 + protein_coding KNOWN OTTHUMG00000188602.1 10087 1325 9 ENSG00000233861.1 MGAT2P1 chrX 135730733 135732197 - processed_pseudogene KNOWN OTTHUMG00000022492.1 1465 797 2 ENSG00000238200.1 MGAT2P2 chrX 135751119 135752583 + processed_pseudogene KNOWN OTTHUMG00000022493.2 1465 797 2 ENSG00000269096.5 CT45A3 chrX 135759846 135768191 - protein_coding KNOWN OTTHUMG00000022489.6 8346 1166 9 ENSG00000228836.7 CT45A5 chrX 135777130 135785298 - protein_coding KNOWN OTTHUMG00000188603.1 8169 1161 9 ENSG00000278289.3 CT45A6 chrX 135794706 135802656 - protein_coding KNOWN OTTHUMG00000188604.1 7951 916 9 ENSG00000271228.1 CTC-336P14.1 chr2 32013061 32013368 + antisense NOVEL OTTHUMG00000185176.1 308 308 1 ENSG00000271449.6 CT45A2 chrX 135811668 135820012 - protein_coding KNOWN OTTHUMG00000022490.6 8345 1321 9 ENSG00000273696.3 CT45A7 chrX 135829247 135837268 - protein_coding KNOWN OTTHUMG00000022491.5 8022 998 9 ENSG00000278085.3 CT45A8 chrX 135846499 135854538 - protein_coding KNOWN OTTHUMG00000188605.1 8040 1010 9 ENSG00000270946.4 CT45A9 chrX 135863776 135871812 - protein_coding KNOWN OTTHUMG00000188606.2 8037 1012 9 ENSG00000269586.6 CT45A10 chrX 135881063 135889086 - protein_coding KNOWN OTTHUMG00000022494.6 8024 1012 9 ENSG00000181433.8 SAGE1 chrX 135889205 135913061 + protein_coding KNOWN OTTHUMG00000022496.1 23857 2953 51 ENSG00000230162.1 CT45A11P chrX 135942478 135947139 - unprocessed_pseudogene KNOWN OTTHUMG00000022497.1 4662 1134 4 ENSG00000169446.5 MMGT1 chrX 135962070 135974063 - protein_coding KNOWN OTTHUMG00000022499.3 11994 3738 4 ENSG00000198689.8 SLC9A6 chrX 135985424 136047269 + protein_coding KNOWN OTTHUMG00000022498.2 61846 5200 64 ENSG00000276558.1 AL732579.1 chrX 136008483 136008573 + miRNA NOVEL NA 91 91 1 ENSG00000021574.10 SPAST chr2 32063611 32157637 + protein_coding KNOWN OTTHUMG00000128455.3 94027 5213 67 ENSG00000219930.4 GAPDHP67 chrX 136077844 136078631 + processed_pseudogene KNOWN OTTHUMG00000022501.2 788 788 1 ENSG00000231513.3 E2F6P4 chrX 136097835 136098348 - processed_pseudogene KNOWN OTTHUMG00000022502.1 514 514 1 ENSG00000239080.1 snoU13 chrX 136134317 136134420 - snoRNA NOVEL NA 104 104 1 ENSG00000022267.15 FHL1 chrX 136146702 136211359 + protein_coding KNOWN OTTHUMG00000022504.5 64658 5997 178 ENSG00000129680.14 MAP7D3 chrX 136213220 136256482 - protein_coding KNOWN OTTHUMG00000022507.3 43263 7067 89 ENSG00000230079.1 STK24P1 chrX 136295690 136300298 - processed_pseudogene KNOWN OTTHUMG00000022506.1 4609 1291 2 ENSG00000156920.9 GPR112 chrX 136300963 136416888 + protein_coding KNOWN OTTHUMG00000022508.2 115926 10074 73 ENSG00000266272.1 Z97632.1 chrX 136487292 136487392 + miRNA NOVEL NA 101 101 1 ENSG00000102239.4 BRS3 chrX 136487887 136493780 + protein_coding KNOWN OTTHUMG00000022726.1 5894 2833 3 ENSG00000102241.10 HTATSF1 chrX 136497079 136512346 + protein_coding KNOWN OTTHUMG00000022510.2 15268 3136 31 ENSG00000263802.1 AL121655.1 chr2 32088304 32088391 - miRNA NOVEL NA 88 88 1 ENSG00000102243.11 VGLL1 chrX 136532152 136556807 + protein_coding KNOWN OTTHUMG00000022509.1 24656 1541 14 ENSG00000216060.1 MIR934 chrX 136550878 136550960 + miRNA KNOWN NA 83 83 1 ENSG00000199424.1 Y_RNA chrX 136571705 136571815 - misc_RNA NOVEL NA 111 111 1 ENSG00000252320.1 RNU6-320P chrX 136583240 136583345 + snRNA KNOWN NA 106 106 1 ENSG00000233093.4 LINC00892 chrX 136639543 136642429 + processed_transcript NOVEL OTTHUMG00000022511.2 2887 1918 8 ENSG00000102245.6 CD40LG chrX 136648193 136660390 + protein_coding KNOWN OTTHUMG00000022512.1 12198 1817 9 ENSG00000129675.14 ARHGEF6 chrX 136665547 136782088 - protein_coding KNOWN OTTHUMG00000022518.2 116542 6434 64 ENSG00000212510.1 RNU6-972P chrX 136773999 136774105 + snRNA KNOWN NA 107 107 1 ENSG00000271339.1 RP11-1114A5.6 chrX 136788286 136788787 + processed_pseudogene KNOWN OTTHUMG00000184939.1 502 502 1 ENSG00000231164.1 RPL7P56 chrX 136791064 136791780 + processed_pseudogene KNOWN OTTHUMG00000022513.1 717 717 1 ENSG00000272716.1 RP11-563N4.1 chr2 32165046 32165757 - lincRNA NOVEL OTTHUMG00000185842.1 712 712 1 ENSG00000225125.2 RANP4 chrX 136807223 136807877 - processed_pseudogene KNOWN OTTHUMG00000022514.2 655 655 1 ENSG00000202279.1 Y_RNA chrX 136816477 136816574 - misc_RNA NOVEL NA 98 98 1 ENSG00000232611.1 RP11-1114A5.4 chrX 136840931 136847797 - lincRNA NOVEL OTTHUMG00000022515.2 6867 3018 2 ENSG00000225400.1 RP11-1114A5.5 chrX 136847384 136848034 + processed_pseudogene KNOWN OTTHUMG00000022516.1 651 651 1 ENSG00000147274.13 RBMX chrX 136848004 136880764 - protein_coding KNOWN OTTHUMG00000022517.2 32761 5882 73 ENSG00000206979.1 SNORD61 chrX 136879199 136879271 - snoRNA KNOWN NA 73 73 1 ENSG00000234062.6 RP11-308D16.2 chrX 136909395 137021630 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000040141.2 112236 3389 26 ENSG00000232379.1 RP11-308D16.1 chrX 136947748 136948133 - processed_pseudogene KNOWN OTTHUMG00000040140.1 386 386 1 ENSG00000237307.2 SRRM1P3 chrX 136976417 136985705 - processed_pseudogene KNOWN OTTHUMG00000022520.2 9289 2678 3 ENSG00000165370.1 GPR101 chrX 137030148 137031674 - protein_coding KNOWN OTTHUMG00000022521.1 1527 1527 1 ENSG00000152683.13 SLC30A6 chr2 32165841 32224379 + protein_coding KNOWN OTTHUMG00000128456.2 58539 5410 106 ENSG00000214748.2 RP11-332E4.1 chrX 137324972 137325049 - processed_pseudogene KNOWN OTTHUMG00000022522.1 78 78 1 ENSG00000237584.1 RAC1P4 chrX 137441258 137441836 - processed_pseudogene KNOWN OTTHUMG00000022523.2 579 579 1 ENSG00000224765.1 RP1-137H15.2 chrX 137556191 137564387 - antisense NOVEL OTTHUMG00000022524.1 8197 736 5 ENSG00000156925.10 ZIC3 chrX 137566142 137577691 + protein_coding KNOWN OTTHUMG00000022525.1 11550 4136 8 ENSG00000239579.3 RN7SL325P chrX 137595265 137595547 + misc_RNA KNOWN NA 283 283 1 ENSG00000229562.1 ZFYVE9P1 chrX 137660519 137662242 + processed_pseudogene KNOWN OTTHUMG00000022526.1 1724 1724 1 ENSG00000222114.1 RNU6-985P chrX 137687891 137687994 - snRNA KNOWN NA 104 104 1 ENSG00000252163.1 RN7SKP31 chrX 138397351 138397628 + misc_RNA KNOWN NA 278 278 1 ENSG00000183981.8 MAGEA13P chrX 138482745 138483695 + processed_pseudogene KNOWN OTTHUMG00000022527.1 951 951 1 ENSG00000214930.2 KRT8P6 chrX 138487665 138488871 - processed_pseudogene KNOWN OTTHUMG00000022528.1 1207 1207 1 ENSG00000229816.1 DDX50P1 chr2 32201600 32203999 + processed_pseudogene KNOWN OTTHUMG00000152105.1 2400 2400 1 ENSG00000129682.12 FGF13 chrX 138614731 139222777 - protein_coding KNOWN OTTHUMG00000022532.4 608047 20627 41 ENSG00000232183.1 RP6-27P15.2 chrX 138627077 138627343 + antisense NOVEL OTTHUMG00000022529.1 267 142 2 ENSG00000207800.2 MIR504 chrX 138667692 138667800 - miRNA KNOWN NA 109 109 1 ENSG00000226031.4 FGF13-AS1 chrX 138711452 138716617 + antisense KNOWN OTTHUMG00000137416.1 5166 1145 7 ENSG00000235975.1 RP1-106C24.1 chrX 138806374 138807091 + processed_pseudogene KNOWN OTTHUMG00000022531.1 718 718 1 ENSG00000173954.8 SNURFL chrX 139362040 139362382 + processed_pseudogene KNOWN OTTHUMG00000022534.1 343 343 1 ENSG00000232549.1 SRD5A1P1 chrX 139446891 139447676 + processed_pseudogene KNOWN OTTHUMG00000022684.1 786 786 1 ENSG00000101981.9 F9 chrX 139530758 139563458 + protein_coding KNOWN OTTHUMG00000022536.2 32701 2780 19 ENSG00000101977.18 MCF2 chrX 139581770 139708227 - protein_coding KNOWN OTTHUMG00000022537.3 126458 4996 214 ENSG00000216114.2 AL033403.1 chrX 139599216 139599303 - miRNA NOVEL NA 88 88 1 ENSG00000201113.1 RNU6-647P chr2 32214456 32214562 - snRNA KNOWN NA 107 107 1 ENSG00000238485.1 snoU13 chrX 139702287 139702390 - snoRNA NOVEL NA 104 104 1 ENSG00000101974.13 ATP11C chrX 139726346 139945276 - protein_coding KNOWN OTTHUMG00000022538.6 218931 7407 141 ENSG00000221375.1 RNU6ATAC23P chrX 139885481 139885603 + snRNA KNOWN NA 123 123 1 ENSG00000252719.1 SNORA18 chrX 139909904 139910034 + snoRNA NOVEL NA 131 131 1 ENSG00000207633.2 MIR505 chrX 139924126 139924237 - miRNA KNOWN NA 112 112 1 ENSG00000203933.2 CXorf66 chrX 139955725 139965520 - protein_coding KNOWN OTTHUMG00000022539.1 9796 1281 3 ENSG00000233145.1 RP11-364B14.1 chrX 140017268 140018037 + lincRNA NOVEL OTTHUMG00000022540.1 770 582 2 ENSG00000214653.4 HNRNPA3P3 chrX 140032344 140033480 + processed_pseudogene KNOWN OTTHUMG00000022541.1 1137 1137 1 ENSG00000241248.3 RN7SL727P chrX 140085855 140086150 + misc_RNA KNOWN NA 296 296 1 ENSG00000280833.1 AL589987.1 chrX 140086058 140086145 + miRNA NOVEL NA 88 88 1 ENSG00000142619.4 PADI3 chr1 17249098 17284233 + protein_coding KNOWN OTTHUMG00000002373.1 35136 3189 16 ENSG00000091106.17 NLRC4 chr2 32224453 32265854 - protein_coding KNOWN OTTHUMG00000152107.2 41402 3624 36 ENSG00000230707.1 RP11-364B14.3 chrX 140091743 140092561 + processed_pseudogene KNOWN OTTHUMG00000022542.1 819 819 1 ENSG00000231110.1 AC004070.1 chrX 140216035 140216804 - lincRNA NOVEL OTTHUMG00000022543.2 770 582 2 ENSG00000224942.1 RP11-51C14.1 chrX 140397062 140398311 + processed_pseudogene KNOWN OTTHUMG00000022545.1 1250 1226 2 ENSG00000263377.1 AL121875.1 chrX 140404099 140404190 - miRNA NOVEL NA 92 92 1 ENSG00000275268.1 U7 chrX 140451148 140451208 + snRNA NOVEL NA 61 61 1 ENSG00000225758.1 RPS17P17 chrX 140470866 140471274 - processed_pseudogene KNOWN OTTHUMG00000022546.2 409 409 1 ENSG00000134595.7 SOX3 chrX 140502987 140505503 - protein_coding KNOWN OTTHUMG00000022544.1 2517 2517 1 ENSG00000230668.1 XXyac-YR29IB3.1 chrX 140681106 140687705 - lincRNA NOVEL OTTHUMG00000022547.1 6600 323 3 ENSG00000203930.9 LINC00632 chrX 140709767 140772679 + lincRNA KNOWN OTTHUMG00000022548.3 62913 3008 14 ENSG00000184258.6 CDR1 chrX 140782405 140784871 - protein_coding KNOWN OTTHUMG00000137398.1 2467 2467 1 ENSG00000119820.9 YIPF4 chr2 32277910 32316594 + protein_coding KNOWN OTTHUMG00000128452.3 38685 12233 15 ENSG00000281508.1 CDR1-AS chrX 140783176 140784660 + antisense KNOWN OTTHUMG00000189747.1 1485 1485 1 ENSG00000221081.1 MIR320D2 chrX 140926172 140926219 - miRNA KNOWN NA 48 48 1 ENSG00000229269.1 RP11-298A8.2 chrX 140931738 140997448 + lincRNA NOVEL OTTHUMG00000022550.1 65711 217 3 ENSG00000227234.1 SPANXB2 chrX 141002591 141003706 + protein_coding KNOWN OTTHUMG00000022554.2 1116 469 2 ENSG00000207041.1 RNU6-3P chrX 141118030 141118136 - snRNA KNOWN NA 107 107 1 ENSG00000214925.3 RP3-507I15.1 chrX 141138478 141139174 + processed_pseudogene KNOWN OTTHUMG00000022555.1 697 370 2 ENSG00000261212.1 RP3-507I15.2 chrX 141173235 141173588 - lincRNA NOVEL OTTHUMG00000175566.1 354 354 1 ENSG00000182195.7 LDOC1 chrX 141175745 141177125 - protein_coding KNOWN OTTHUMG00000022558.2 1381 1381 3 ENSG00000198573.6 SPANXC chrX 141241463 141242496 - protein_coding KNOWN OTTHUMG00000022556.2 1034 387 2 ENSG00000213423.4 RBMX2P2 chrX 141261119 141264213 - processed_pseudogene KNOWN OTTHUMG00000022557.3 3095 946 2 ENSG00000272754.1 AL133245.2 chr2 32321638 32323002 + lincRNA NOVEL OTTHUMG00000185846.2 1365 1365 1 ENSG00000227779.1 GS1-164F24.1 chrX 141380823 141381107 + processed_pseudogene KNOWN OTTHUMG00000022560.1 285 285 1 ENSG00000277215.1 SPANXA2-OT1 chrX 141502849 141649927 + lincRNA NOVEL OTTHUMG00000022566.3 147079 1686 4 ENSG00000198021.6 SPANXA1 chrX 141583674 141698444 - protein_coding KNOWN OTTHUMG00000022564.3 114771 802 4 ENSG00000203926.4 SPANXA2 chrX 141589435 141590772 + protein_coding KNOWN OTTHUMG00000022565.2 1338 691 2 ENSG00000223438.1 RP1-171K16.5 chrX 141625864 141626733 + lincRNA NOVEL OTTHUMG00000022567.1 870 681 2 ENSG00000196406.4 SPANXD chrX 141697411 141698739 - protein_coding KNOWN OTTHUMG00000022563.2 1329 682 2 ENSG00000165509.12 MAGEC3 chrX 141838316 141897832 + protein_coding KNOWN OTTHUMG00000022570.3 59517 2763 23 ENSG00000155495.8 MAGEC1 chrX 141903894 141909388 + protein_coding KNOWN OTTHUMG00000022569.1 5495 4270 8 ENSG00000236205.1 RP3-406C18.1 chrX 142147862 142148866 - unprocessed_pseudogene KNOWN OTTHUMG00000022571.2 1005 1005 1 ENSG00000225469.3 RP3-406C18.2 chrX 142172866 142173989 - unprocessed_pseudogene KNOWN OTTHUMG00000022572.1 1124 1124 1 ENSG00000115760.12 BIRC6 chr2 32357028 32618899 + protein_coding KNOWN OTTHUMG00000150528.5 261872 17723 123 ENSG00000250625.1 RP1-142F18.2 chrX 142194352 142195490 - unprocessed_pseudogene KNOWN OTTHUMG00000022573.1 1139 1139 1 ENSG00000046774.9 MAGEC2 chrX 142202345 142205290 - protein_coding KNOWN OTTHUMG00000022574.1 2946 1991 3 ENSG00000275508.1 GS1-54N10.1 chrX 142372276 142373990 + processed_pseudogene KNOWN OTTHUMG00000188047.1 1715 1197 2 ENSG00000201000.1 RNA5SP516 chrX 142411053 142411171 + rRNA KNOWN NA 119 119 1 ENSG00000274448.1 AL109620.1 chrX 142428477 142428544 + miRNA NOVEL NA 68 68 1 ENSG00000266319.1 AL080272.1 chrX 142606860 142606945 - miRNA NOVEL NA 86 86 1 ENSG00000189326.4 SPANXN4 chrX 143025918 143034702 + protein_coding KNOWN OTTHUMG00000022575.3 8785 625 5 ENSG00000202473.1 RN7SKP81 chrX 143090347 143090677 + misc_RNA KNOWN NA 331 331 1 ENSG00000199878.1 RN7SKP149 chrX 143197248 143197591 - misc_RNA KNOWN NA 344 344 1 ENSG00000227303.1 GS1-256O22.5 chrX 143284977 143516803 + antisense NOVEL OTTHUMG00000022584.1 231827 623 6 ENSG00000230046.1 BIRC6-AS1 chr2 32377631 32379599 - antisense NOVEL OTTHUMG00000152106.1 1969 697 2 ENSG00000226064.1 PGBD4P6 chrX 143343976 143344585 + processed_pseudogene KNOWN OTTHUMG00000022576.1 610 610 1 ENSG00000235539.1 MTND1P33 chrX 143433042 143433958 + processed_pseudogene KNOWN OTTHUMG00000022577.2 917 917 1 ENSG00000230130.1 RP5-1189K21.2 chrX 143434517 143435280 + processed_pseudogene KNOWN OTTHUMG00000022578.1 764 764 1 ENSG00000221505.1 AC239395.1 chrX 143446208 143446337 - miRNA NOVEL NA 130 130 1 ENSG00000189252.4 SPANXN3 chrX 143508735 143517475 - protein_coding KNOWN OTTHUMG00000022582.3 8741 590 2 ENSG00000179542.14 SLITRK4 chrX 143622790 143635777 - protein_coding KNOWN OTTHUMG00000022580.2 12988 8914 6 ENSG00000213924.3 HNRNPH1P2 chrX 143677153 143678362 - processed_pseudogene KNOWN OTTHUMG00000022581.2 1210 1210 1 ENSG00000268988.1 SPANXN2 chrX 143711955 143721423 - protein_coding KNOWN OTTHUMG00000022583.4 9469 1378 2 ENSG00000225970.1 RP3-526F5.2 chrX 143757737 143828133 + lincRNA NOVEL OTTHUMG00000022587.1 70397 318 3 ENSG00000235729.1 RP11-29O6.2 chrX 143806391 143806733 + processed_pseudogene KNOWN OTTHUMG00000022585.1 343 343 1 ENSG00000276334.1 AL133243.1 chr2 32521927 32523547 + sense_intronic NOVEL OTTHUMG00000188157.1 1621 1621 1 ENSG00000276380.1 UBE2NL chrX 143884071 143885255 + transcribed_processed_pseudogene KNOWN OTTHUMG00000188525.1 1185 1185 2 ENSG00000224630.2 RP1-169P22.2 chrX 144308834 144309080 - processed_pseudogene KNOWN OTTHUMG00000022589.3 247 247 1 ENSG00000235598.1 RRM2P4 chrX 144309132 144309693 + processed_pseudogene KNOWN OTTHUMG00000022588.1 562 562 1 ENSG00000215054.3 HNRNPCP10 chrX 144840777 144841660 + processed_pseudogene KNOWN OTTHUMG00000022590.2 884 884 1 ENSG00000201912.1 RN7SKP189 chrX 145057108 145057437 + misc_RNA KNOWN NA 330 330 1 ENSG00000233548.1 CYCSP44 chrX 145176582 145176894 + processed_pseudogene KNOWN OTTHUMG00000022591.1 313 313 1 ENSG00000234712.1 RP11-143G3.1 chrX 145232929 145233619 - antisense NOVEL OTTHUMG00000022592.1 691 378 2 ENSG00000203923.4 SPANXN1 chrX 145246828 145256112 + protein_coding NOVEL OTTHUMG00000022593.2 9285 1276 2 ENSG00000231093.1 RP13-150K15.1 chrX 145630218 145632375 + processed_pseudogene KNOWN OTTHUMG00000022594.1 2158 1855 2 ENSG00000280456.1 AL109653.1 chrX 145707665 145707742 + miRNA NOVEL NA 78 78 1 ENSG00000276517.1 AL133243.2 chr2 32526504 32529507 + sense_intronic NOVEL OTTHUMG00000188158.1 3004 3004 1 ENSG00000270709.1 GS1-115M3.4 chrX 145768095 145768342 + processed_pseudogene KNOWN OTTHUMG00000184937.1 248 248 1 ENSG00000279585.1 GS1-115M3.3 chrX 145797375 145798439 + TEC KNOWN OTTHUMG00000175565.1 1065 1065 1 ENSG00000185985.8 SLITRK2 chrX 145817832 145825842 + protein_coding KNOWN OTTHUMG00000022595.1 8011 7867 6 ENSG00000221870.2 TMEM257 chrX 145827410 145829850 + protein_coding KNOWN OTTHUMG00000159605.1 2441 2441 1 ENSG00000252219.2 MIR892C chrX 145992750 145992826 - miRNA KNOWN NA 77 77 1 ENSG00000216075.1 MIR890 chrX 145994275 145994351 - miRNA KNOWN NA 77 77 1 ENSG00000216005.1 MIR888 chrX 145994784 145994860 - miRNA KNOWN NA 77 77 1 ENSG00000215943.1 MIR892A chrX 145996669 145996743 - miRNA KNOWN NA 75 75 1 ENSG00000216098.1 MIR892B chrX 145997198 145997274 - miRNA KNOWN NA 77 77 1 ENSG00000216064.1 MIR891B chrX 146001053 146001131 - miRNA KNOWN NA 79 79 1 ENSG00000207653.1 MIR558 chr2 32532153 32532246 + miRNA KNOWN NA 94 94 1 ENSG00000216056.1 MIR891A chrX 146027794 146027872 - miRNA KNOWN NA 79 79 1 ENSG00000201594.1 RNA5SP517 chrX 146427456 146427572 - rRNA KNOWN NA 117 117 1 ENSG00000234748.1 RP11-183K14.1 chrX 146537535 146538048 + processed_pseudogene KNOWN OTTHUMG00000022596.1 514 514 1 ENSG00000226388.1 ELL2P4 chrX 146553728 146555765 + processed_pseudogene KNOWN OTTHUMG00000022597.1 2038 1376 2 ENSG00000231686.1 RP1-203P18.1 chrX 146619597 146620584 - processed_pseudogene KNOWN OTTHUMG00000022598.1 988 988 1 ENSG00000235699.2 CXorf51B chrX 146809784 146810409 + lincRNA NOVEL OTTHUMG00000022599.1 626 436 2 ENSG00000224440.1 CXorf51A chrX 146814106 146814726 - lincRNA KNOWN OTTHUMG00000022600.1 621 431 2 ENSG00000225660.1 RP1-73A14.1 chrX 146955075 146955209 + processed_pseudogene KNOWN OTTHUMG00000022601.1 135 135 1 ENSG00000271660.1 RP1-73A14.2 chrX 146964176 146964485 - processed_pseudogene KNOWN OTTHUMG00000185054.1 310 310 1 ENSG00000216171.1 MIR513C chrX 147189704 147189787 - miRNA KNOWN NA 84 84 1 ENSG00000274159.1 AL133243.3 chr2 32548675 32549040 + sense_intronic NOVEL OTTHUMG00000188159.1 366 366 1 ENSG00000207871.2 MIR513B chrX 147199044 147199127 - miRNA KNOWN NA 84 84 1 ENSG00000207873.1 MIR513A1 chrX 147213463 147213591 - miRNA KNOWN NA 129 129 1 ENSG00000207984.1 MIR513A2 chrX 147225826 147225952 - miRNA KNOWN NA 127 127 1 ENSG00000207731.1 MIR506 chrX 147230720 147230843 - miRNA KNOWN NA 124 124 1 ENSG00000207969.1 MIR507 chrX 147230984 147231077 - miRNA KNOWN NA 94 94 1 ENSG00000207589.1 MIR508 chrX 147236913 147237027 - miRNA KNOWN NA 115 115 1 ENSG00000252583.2 MIR514B chrX 147250151 147250230 - miRNA KNOWN NA 80 80 1 ENSG00000212013.1 MIR509-2 chrX 147258760 147258850 - miRNA KNOWN NA 91 91 1 ENSG00000212014.1 MIR509-3 chrX 147259652 147259726 - miRNA KNOWN NA 75 75 1 ENSG00000208000.1 MIR509-1 chrX 147260532 147260625 - miRNA KNOWN NA 94 94 1 ENSG00000279897.1 BIRC6-AS2 chr2 32557520 32574818 - antisense KNOWN OTTHUMG00000189406.1 17299 589 2 ENSG00000207641.1 MIR510 chrX 147272335 147272408 - miRNA KNOWN NA 74 74 1 ENSG00000207868.1 MIR514A1 chrX 147279247 147279344 - miRNA KNOWN NA 98 98 1 ENSG00000207866.1 MIR514A2 chrX 147281943 147282030 - miRNA KNOWN NA 88 88 1 ENSG00000207867.1 MIR514A3 chrX 147284641 147284728 - miRNA KNOWN NA 88 88 1 ENSG00000274579.1 RP5-824H1.1 chrX 147476324 147476446 + processed_pseudogene KNOWN OTTHUMG00000188046.1 123 123 1 ENSG00000228855.1 RP3-433G13.1 chrX 147591612 147591909 - processed_pseudogene KNOWN OTTHUMG00000022602.1 298 298 1 ENSG00000227505.1 RP11-434J24.2 chrX 147801005 147801302 + processed_pseudogene KNOWN OTTHUMG00000022603.1 298 298 1 ENSG00000271175.1 RP11-434J24.3 chrX 147812733 147812974 - processed_pseudogene KNOWN OTTHUMG00000185055.1 242 242 1 ENSG00000202051.1 RNU6-382P chrX 147827279 147827384 + snRNA KNOWN NA 106 106 1 ENSG00000227083.1 L29074.3 chrX 147900178 147901459 - antisense NOVEL OTTHUMG00000022605.1 1282 534 2 ENSG00000266634.1 MIR3972 chr1 17277889 17277975 + miRNA KNOWN NA 87 87 1 ENSG00000279544.1 AL133243.4 chr2 32563328 32566436 + TEC KNOWN OTTHUMG00000188160.1 3109 3109 1 ENSG00000268066.4 FMR1-AS1 chrX 147909431 147911817 - processed_transcript KNOWN OTTHUMG00000182466.1 2387 2387 8 ENSG00000274086.1 FMR1-AS1_2 chrX 147911822 147911948 + misc_RNA NOVEL NA 127 127 1 ENSG00000102081.12 FMR1 chrX 147911951 147951125 + protein_coding KNOWN OTTHUMG00000022606.3 39175 8827 215 ENSG00000236337.1 FMR1-IT1 chrX 147946941 147947583 + sense_intronic NOVEL OTTHUMG00000046184.1 643 343 2 ENSG00000176988.7 FMR1NB chrX 147981329 148026667 + protein_coding KNOWN OTTHUMG00000022608.4 45339 1149 11 ENSG00000201285.1 5S_rRNA chrX 148008100 148008215 - rRNA NOVEL NA 116 116 1 ENSG00000219507.4 FTH1P8 chrX 148052233 148052746 + processed_pseudogene KNOWN OTTHUMG00000022607.1 514 514 1 ENSG00000233467.2 U40455.1 chrX 148198014 148198878 - processed_pseudogene KNOWN OTTHUMG00000022609.1 865 865 1 ENSG00000176970.8 RPL7L1P11 chrX 148464708 148465428 + processed_pseudogene KNOWN OTTHUMG00000022610.2 721 721 1 ENSG00000237741.1 AC002368.4 chrX 148498113 148500615 - antisense NOVEL OTTHUMG00000022612.1 2503 388 2 ENSG00000018699.10 TTC27 chr2 32628032 32821051 + protein_coding KNOWN OTTHUMG00000152134.3 193020 3185 43 ENSG00000155966.12 AFF2 chrX 148500619 149000663 + protein_coding KNOWN OTTHUMG00000022613.3 500045 14006 67 ENSG00000281817.1 AFF2 chrX 148501098 148991332 + protein_coding KNOWN NA 490235 3831 20 ENSG00000223516.1 AFF2-IT1 chrX 148546878 148547397 + sense_intronic NOVEL OTTHUMG00000022611.1 520 443 2 ENSG00000222313.1 RN7SKP267 chrX 148822164 148822448 - misc_RNA KNOWN NA 285 285 1 ENSG00000242186.1 AC002523.1 chrX 149056716 149057166 + unprocessed_pseudogene KNOWN OTTHUMG00000022614.2 451 260 2 ENSG00000264702.1 AC231656.1 chrX 149312233 149312315 + miRNA NOVEL NA 83 83 1 ENSG00000010404.16 IDS chrX 149476990 149521096 - protein_coding KNOWN OTTHUMG00000022615.7 44107 9292 53 ENSG00000241489.6 IDS chrX 149482543 149533935 - protein_coding NOVEL OTTHUMG00000022618.5 51393 3311 23 ENSG00000238039.1 AF011889.2 chrX 149511509 149526264 - lincRNA NOVEL OTTHUMG00000022616.1 14756 655 2 ENSG00000176289.4 IDSP1 chrX 149525001 149526043 + unprocessed_pseudogene KNOWN OTTHUMG00000022620.1 1043 376 2 ENSG00000265057.1 MIR4765 chr2 32635255 32635331 + miRNA KNOWN NA 77 77 1 ENSG00000241769.6 LINC00893 chrX 149527591 149540959 - antisense NOVEL OTTHUMG00000022617.5 13369 3604 70 ENSG00000197620.9 CXorf40A chrX 149540355 149550510 + protein_coding KNOWN OTTHUMG00000022622.4 10156 4104 54 ENSG00000225261.1 RP5-937E21.8 chrX 149548210 149549835 - antisense NOVEL OTTHUMG00000022623.1 1626 1167 2 ENSG00000267978.4 MAGEA9 chrX 149581653 149587453 - protein_coding KNOWN OTTHUMG00000188533.1 5801 1921 15 ENSG00000268738.2 HSFX2 chrX 149592515 149594716 - protein_coding KNOWN OTTHUMG00000188526.1 2202 1365 2 ENSG00000269556.6 TMEM185A chrX 149596556 149631912 - protein_coding KNOWN OTTHUMG00000022625.9 35357 5158 44 ENSG00000229322.1 RP5-937E21.1 chrX 149649174 149650124 - processed_pseudogene KNOWN OTTHUMG00000022624.2 951 951 1 ENSG00000185247.13 MAGEA11 chrX 149688228 149717266 + protein_coding KNOWN OTTHUMG00000022633.4 29039 3465 21 ENSG00000228833.1 RP5-1014O16.9 chrX 149757797 149757895 + unprocessed_pseudogene KNOWN OTTHUMG00000150425.1 99 99 1 ENSG00000223377.1 RP5-1014O16.1 chrX 149758021 149758295 - unprocessed_pseudogene KNOWN OTTHUMG00000022628.2 275 275 1 ENSG00000230876.5 LINC00486 chr2 32825443 32926693 + lincRNA NOVEL OTTHUMG00000152136.2 101251 2101 15 ENSG00000231694.1 RP5-1014O16.10 chrX 149760779 149760874 + unprocessed_pseudogene KNOWN OTTHUMG00000150426.1 96 96 1 ENSG00000235254.3 TMEM185AP1 chrX 149768897 149771368 + unprocessed_pseudogene KNOWN OTTHUMG00000022629.4 2472 546 3 ENSG00000171116.7 HSFX1 chrX 149774068 149776867 + protein_coding KNOWN OTTHUMG00000022626.1 2800 1963 2 ENSG00000123584.7 MAGEA9B chrX 149781930 149787737 + protein_coding KNOWN OTTHUMG00000022621.4 5808 1814 4 ENSG00000224732.1 MAGEA7P chrX 149808214 149809155 + unprocessed_pseudogene KNOWN OTTHUMG00000022631.3 942 942 1 ENSG00000229829.1 DUTP4 chrX 149817170 149817644 + processed_pseudogene KNOWN OTTHUMG00000022632.1 475 475 1 ENSG00000280752.1 LINC00850 chrX 149825708 149879799 + lincRNA KNOWN OTTHUMG00000189730.1 54092 685 3 ENSG00000230899.1 MAGEA8-AS1 chrX 149878836 149881070 - antisense NOVEL OTTHUMG00000022634.1 2235 476 5 ENSG00000156009.8 MAGEA8 chrX 149881141 149885835 + protein_coding KNOWN OTTHUMG00000022635.2 4695 2363 17 ENSG00000197021.7 CXorf40B chrX 149929527 149938811 - protein_coding KNOWN OTTHUMG00000034327.3 9285 2509 33 ENSG00000236854.1 AL121656.5 chr2 32927127 32928405 + lincRNA NOVEL OTTHUMG00000152135.1 1279 482 3 ENSG00000224871.1 XX-FW81066F1.2 chrX 149929662 149930698 + antisense NOVEL OTTHUMG00000034359.1 1037 578 2 ENSG00000235703.4 LINC00894 chrX 149938628 150224580 + antisense NOVEL OTTHUMG00000022638.4 285953 6323 45 ENSG00000183171.5 RP11-49C9.2 chrX 150114378 150116520 + processed_pseudogene KNOWN OTTHUMG00000022636.1 2143 2143 1 ENSG00000252454.2 MIR2114 chrX 150227982 150228091 + miRNA KNOWN NA 110 110 1 ENSG00000234825.3 XRCC6P2 chrX 150231075 150232896 - processed_pseudogene KNOWN OTTHUMG00000022637.2 1822 1822 1 ENSG00000013619.12 MAMLD1 chrX 150361422 150514178 + protein_coding KNOWN OTTHUMG00000024157.4 152757 5958 35 ENSG00000263713.1 AC235953.1 chrX 150489532 150489618 - miRNA NOVEL NA 87 87 1 ENSG00000171100.13 MTM1 chrX 150568619 150673322 + protein_coding KNOWN OTTHUMG00000024158.5 104704 4016 45 ENSG00000063601.15 MTMR1 chrX 150692971 150765103 + protein_coding KNOWN OTTHUMG00000024159.5 72133 6323 134 ENSG00000102181.18 CD99L2 chrX 150766337 150898816 - protein_coding KNOWN OTTHUMG00000024247.3 132480 5762 72 ENSG00000275309.1 AL133244.2 chr2 32939061 32939145 - miRNA NOVEL NA 85 85 1 ENSG00000228728.1 RP11-316K19.3 chrX 150818753 150819246 + processed_pseudogene KNOWN OTTHUMG00000024160.1 494 494 1 ENSG00000230153.4 AF003626.1 chrX 150915813 150920938 + lincRNA NOVEL OTTHUMG00000024161.1 5126 520 7 ENSG00000222796.1 RNU6-383P chrX 150955494 150955587 - snRNA KNOWN NA 94 94 1 ENSG00000029993.13 HMGB3 chrX 150980509 150990775 + protein_coding KNOWN OTTHUMG00000024162.1 10267 3967 23 ENSG00000230508.1 RPL19P21 chrX 150993501 150994091 + processed_pseudogene KNOWN OTTHUMG00000024163.1 591 591 1 ENSG00000270916.1 RP4-741O10.1 chrX 151023607 151023722 - processed_pseudogene KNOWN OTTHUMG00000185066.1 116 116 1 ENSG00000212595.1 5S_rRNA chrX 151026295 151026406 - rRNA NOVEL NA 112 112 1 ENSG00000265789.1 MIR4330 chrX 151168222 151168326 + miRNA KNOWN NA 105 105 1 ENSG00000234696.1 GPR50-AS1 chrX 151175192 151177836 - antisense NOVEL OTTHUMG00000024165.1 2645 1620 3 ENSG00000102195.8 GPR50 chrX 151176653 151181465 + protein_coding KNOWN OTTHUMG00000024166.1 4813 1951 6 ENSG00000206951.1 Y_RNA chr2 32945339 32945451 - misc_RNA NOVEL NA 113 113 1 ENSG00000269993.1 AF003625.3 chrX 151182386 151182855 + lincRNA NOVEL OTTHUMG00000184144.2 470 470 1 ENSG00000228717.1 AF013593.1 chrX 151226229 151227715 - processed_pseudogene KNOWN OTTHUMG00000024167.1 1487 1487 1 ENSG00000278724.1 Metazoa_SRP chrX 151275509 151275789 + misc_RNA NOVEL NA 281 281 1 ENSG00000160131.12 VMA21 chrX 151396515 151409364 + protein_coding KNOWN OTTHUMG00000024168.1 12850 5109 10 ENSG00000270052.1 WI2-80269A6.1 chrX 151497726 151498354 + lincRNA NOVEL OTTHUMG00000184061.1 629 435 2 ENSG00000214915.3 XX-FW80269A6.1 chrX 151515551 151516245 + lincRNA NOVEL OTTHUMG00000032120.1 695 482 2 ENSG00000166049.10 PASD1 chrX 151563622 151676739 + protein_coding KNOWN OTTHUMG00000024169.3 113118 4429 31 ENSG00000239429.1 RP11-45D17.1 chrX 151611664 151671196 + unprocessed_pseudogene KNOWN OTTHUMG00000040477.1 59533 615 6 ENSG00000130032.14 PRRG3 chrX 151695124 151705924 + protein_coding KNOWN OTTHUMG00000024170.1 10801 6364 17 ENSG00000147378.10 FATE1 chrX 151716035 151723194 + protein_coding KNOWN OTTHUMG00000024172.2 7160 1072 9 ENSG00000049323.14 LTBP1 chr2 32946972 33399509 + protein_coding KNOWN OTTHUMG00000152118.13 452538 7329 194 ENSG00000183862.5 CNGA2 chrX 151738451 151745304 + protein_coding KNOWN OTTHUMG00000024173.1 6854 2834 6 ENSG00000229967.1 RP11-366F6.2 chrX 151904431 151913968 - antisense NOVEL OTTHUMG00000024175.1 9538 1589 10 ENSG00000147381.10 MAGEA4 chrX 151912509 151925170 + protein_coding KNOWN OTTHUMG00000024174.1 12662 3081 42 ENSG00000102287.15 GABRE chrX 151953124 151974680 - protein_coding KNOWN OTTHUMG00000024176.3 21557 9612 44 ENSG00000264120.1 AF274855.1 chrX 151956683 151956778 - miRNA NOVEL NA 96 96 1 ENSG00000207621.1 MIR224 chrX 151958578 151958658 - miRNA KNOWN NA 81 81 1 ENSG00000207753.2 MIR452 chrX 151959607 151959719 - miRNA KNOWN NA 113 113 1 ENSG00000228965.1 RP11-1007I13.2 chrX 152045314 152046193 - processed_pseudogene KNOWN OTTHUMG00000024177.1 880 880 1 ENSG00000242520.5 MAGEA5 chrX 152114599 152115540 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000160288.2 942 942 1 ENSG00000266560.4 RP11-1007I13.4 chrX 152114994 152138556 - processed_transcript NOVEL OTTHUMG00000179366.2 23563 1310 14 ENSG00000223951.1 AL133244.1 chr2 33056333 33063113 - processed_pseudogene KNOWN OTTHUMG00000152123.2 6781 258 3 ENSG00000124260.10 MAGEA10 chrX 152133310 152138578 - protein_coding KNOWN OTTHUMG00000024180.3 5269 2899 28 ENSG00000231937.1 RP11-329E24.6 chrX 152138883 152186857 + antisense NOVEL OTTHUMG00000024178.1 47975 551 4 ENSG00000011677.11 GABRA3 chrX 152166234 152451358 - protein_coding KNOWN OTTHUMG00000024183.2 285125 4193 24 ENSG00000252205.1 RNU6-764P chrX 152250572 152250676 - snRNA KNOWN NA 105 105 1 ENSG00000207957.1 MIR105-1 chrX 152392219 152392299 - miRNA KNOWN NA 81 81 1 ENSG00000211583.2 MIR767 chrX 152393413 152393523 - miRNA KNOWN NA 111 111 1 ENSG00000207818.1 MIR105-2 chrX 152394412 152394492 - miRNA KNOWN NA 81 81 1 ENSG00000223940.1 KRT8P8 chrX 152479577 152481024 + processed_pseudogene KNOWN OTTHUMG00000024182.1 1448 1448 1 ENSG00000268089.2 GABRQ chrX 152638183 152657534 + protein_coding KNOWN OTTHUMG00000022649.4 19352 6172 9 ENSG00000269475.2 CH17-38B12.4 chrX 152682810 152683842 + unprocessed_pseudogene KNOWN OTTHUMG00000188621.1 1033 955 2 ENSG00000212204.1 RNA5SP91 chr2 33285769 33285887 - rRNA KNOWN NA 119 119 1 ENSG00000221867.7 MAGEA3 chrX 152698752 152702347 + protein_coding KNOWN OTTHUMG00000022640.1 3596 1788 9 ENSG00000268902.2 CSAG2 chrX 152708261 152714549 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000022641.5 6289 825 7 ENSG00000183305.12 MAGEA2B chrX 152714586 152718607 + protein_coding KNOWN OTTHUMG00000022645.3 4022 2422 47 ENSG00000198930.11 CSAG1 chrX 152727484 152733735 - protein_coding KNOWN OTTHUMG00000022648.3 6252 1092 17 ENSG00000213401.7 MAGEA12 chrX 152733779 152737669 + protein_coding KNOWN OTTHUMG00000022650.2 3891 1943 8 ENSG00000242599.6 CSAG4 chrX 152733827 152740985 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000022646.4 7159 755 7 ENSG00000231447.1 RP1-14D6.7 chrX 152746817 152747762 + antisense NOVEL OTTHUMG00000022647.1 946 848 2 ENSG00000268606.4 MAGEA2 chrX 152749863 152753884 - protein_coding KNOWN OTTHUMG00000188622.1 4022 2272 42 ENSG00000268916.4 CSAG3 chrX 152753921 152760222 + transcribed_processed_pseudogene KNOWN OTTHUMG00000188381.1 6302 789 7 ENSG00000197172.9 MAGEA6 chrX 152766136 152769747 - protein_coding KNOWN OTTHUMG00000022642.3 3612 1863 13 ENSG00000159339.12 PADI4 chr1 17308195 17364004 + protein_coding KNOWN OTTHUMG00000002371.1 55810 2971 31 ENSG00000252246.1 RNA5SP92 chr2 33332898 33333007 + rRNA KNOWN NA 110 110 1 ENSG00000147400.8 CETN2 chrX 152826973 152830777 - protein_coding KNOWN OTTHUMG00000024246.1 3805 1928 8 ENSG00000147383.9 NSDHL chrX 152830967 152869729 + protein_coding KNOWN OTTHUMG00000024185.1 38763 1996 25 ENSG00000147394.17 ZNF185 chrX 152914442 152973480 + protein_coding KNOWN OTTHUMG00000024187.11 59039 4812 218 ENSG00000198883.10 PNMA5 chrX 152988824 152994127 - protein_coding KNOWN OTTHUMG00000024184.1 5304 3439 14 ENSG00000234200.1 U82671.8 chrX 153028785 153030446 + unprocessed_pseudogene KNOWN OTTHUMG00000024188.3 1662 938 3 ENSG00000229979.1 U82670.9 chrX 153052150 153052413 - processed_pseudogene KNOWN OTTHUMG00000024190.1 264 264 1 ENSG00000183837.9 PNMA3 chrX 153056409 153060467 + protein_coding KNOWN OTTHUMG00000024195.4 4059 3748 7 ENSG00000235961.5 PNMA6A chrX 153072482 153075018 + protein_coding KNOWN OTTHUMG00000186485.2 2537 2209 2 ENSG00000268883.2 PNMA6B chrX 153075769 153076968 - unprocessed_pseudogene KNOWN OTTHUMG00000186486.3 1200 1200 1 ENSG00000224931.3 AC152010.1 chrX 153122145 153128323 - unprocessed_pseudogene KNOWN OTTHUMG00000067452.2 6179 2006 2 ENSG00000152689.16 RASGRP3 chr2 33436324 33564750 + protein_coding KNOWN OTTHUMG00000152124.18 128427 11118 116 ENSG00000198681.6 MAGEA1 chrX 153179285 153183880 + protein_coding KNOWN OTTHUMG00000024192.2 4596 1710 3 ENSG00000266108.1 AC236972.1 chrX 153196633 153196684 + miRNA NOVEL NA 52 52 1 ENSG00000235219.1 CTC-233O10.1 chrX 153203044 153205534 + unprocessed_pseudogene KNOWN OTTHUMG00000067453.1 2491 310 3 ENSG00000273877.3 RP11-635O16.2 chrX 153225649 153230357 + lincRNA NOVEL OTTHUMG00000188638.1 4709 1232 8 ENSG00000231600.1 AC151960.1 chrX 153249115 153249691 - unprocessed_pseudogene KNOWN OTTHUMG00000067456.1 577 199 2 ENSG00000278803.1 RP11-635O16.1 chrX 153276841 153277803 + unprocessed_pseudogene KNOWN OTTHUMG00000188639.1 963 963 1 ENSG00000225110.1 LL0XNC01-16G2.1 chrX 153317683 153320686 - unprocessed_pseudogene KNOWN OTTHUMG00000067448.1 3004 1960 5 ENSG00000063587.13 ZNF275 chrX 153334155 153360110 + protein_coding KNOWN OTTHUMG00000067450.4 25956 8139 10 ENSG00000232249.1 LL0XNC01-37G1.2 chrX 153355733 153355956 + unprocessed_pseudogene KNOWN OTTHUMG00000067455.1 224 224 1 ENSG00000214897.3 U82695.5 chrX 153396963 153398849 - transcribed_processed_pseudogene KNOWN OTTHUMG00000024197.3 1887 1236 5 ENSG00000237133.1 AC020594.5 chr2 33555047 33563547 - antisense NOVEL OTTHUMG00000152537.1 8501 338 2 ENSG00000265170.2 RN7SL667P chrX 153403844 153404141 - misc_RNA KNOWN NA 298 298 1 ENSG00000189420.8 ZFP92 chrX 153418322 153426481 + protein_coding KNOWN OTTHUMG00000024198.4 8160 6105 4 ENSG00000183479.11 TREX2 chrX 153444720 153470587 - protein_coding KNOWN OTTHUMG00000159319.3 25868 2715 54 ENSG00000213397.9 HAUS7 chrX 153447666 153495516 - protein_coding KNOWN OTTHUMG00000159321.3 47851 3968 63 ENSG00000224963.2 U82695.9 chrX 153485856 153487088 + antisense NOVEL OTTHUMG00000024203.2 1233 700 2 ENSG00000182492.14 BGN chrX 153494939 153509554 + protein_coding KNOWN OTTHUMG00000024205.3 14616 2453 32 ENSG00000067842.16 ATP2B3 chrX 153517676 153582939 + protein_coding KNOWN OTTHUMG00000024202.5 65264 7534 110 ENSG00000262919.6 FAM58A chrX 153587919 153600045 - protein_coding KNOWN OTTHUMG00000024206.6 12127 1730 39 ENSG00000260081.1 RP11-66N11.8 chrX 153599340 153604353 + antisense NOVEL OTTHUMG00000175536.1 5014 787 3 ENSG00000217889.3 KRT18P48 chrX 153604497 153605348 - processed_pseudogene KNOWN OTTHUMG00000024199.1 852 852 1 ENSG00000119812.17 FAM98A chr2 33583658 33599382 - protein_coding KNOWN OTTHUMG00000152152.4 15725 4921 35 ENSG00000213391.3 RP11-66N11.6 chrX 153606517 153606888 + processed_pseudogene KNOWN OTTHUMG00000024200.1 372 372 1 ENSG00000228616.1 RP11-66N11.7 chrX 153610694 153612925 + lincRNA NOVEL OTTHUMG00000024201.1 2232 617 2 ENSG00000130829.16 DUSP9 chrX 153642492 153651326 + protein_coding KNOWN OTTHUMG00000024211.6 8835 2776 11 ENSG00000237793.3 RPL18AP16 chrX 153662162 153662692 + processed_pseudogene KNOWN OTTHUMG00000024214.3 531 531 1 ENSG00000244335.3 RN7SL687P chrX 153666226 153666510 + misc_RNA KNOWN NA 285 285 1 ENSG00000281066.1 U52111.1 chrX 153666422 153666511 + miRNA NOVEL NA 90 90 1 ENSG00000130822.14 PNCK chrX 153669730 153689010 - protein_coding KNOWN OTTHUMG00000024216.6 19281 5091 194 ENSG00000130821.14 SLC6A8 chrX 153688099 153696593 + protein_coding KNOWN OTTHUMG00000024208.2 8495 5498 56 ENSG00000185825.14 BCAP31 chrX 153700497 153724697 - protein_coding KNOWN OTTHUMG00000024218.2 24201 2624 46 ENSG00000101986.11 ABCD1 chrX 153724868 153744762 + protein_coding KNOWN OTTHUMG00000024215.3 19895 4233 18 ENSG00000238038.1 ATP6V0E1P3 chr2 33602041 33602286 + processed_pseudogene KNOWN OTTHUMG00000152159.3 246 246 1 ENSG00000232725.1 U52111.14 chrX 153735626 153766478 - antisense NOVEL OTTHUMG00000024213.1 30853 1087 6 ENSG00000198753.10 PLXNB3 chrX 153764196 153779346 + protein_coding KNOWN OTTHUMG00000024217.1 15151 7007 99 ENSG00000184343.9 SRPK3 chrX 153776412 153785732 + protein_coding KNOWN OTTHUMG00000024207.2 9321 4744 108 ENSG00000067829.17 IDH3G chrX 153785766 153794523 - protein_coding KNOWN OTTHUMG00000024219.30 8758 2717 108 ENSG00000180879.12 SSR4 chrX 153793516 153798505 + protein_coding KNOWN OTTHUMG00000024212.2 4990 4590 63 ENSG00000067840.11 PDZD4 chrX 153802166 153830565 - protein_coding KNOWN OTTHUMG00000024209.4 28400 4341 57 ENSG00000184844.6 CYCSP45 chrX 153841251 153841565 + processed_pseudogene KNOWN OTTHUMG00000024210.2 315 315 1 ENSG00000198910.11 L1CAM chrX 153861514 153909223 - protein_coding KNOWN OTTHUMG00000024221.13 47710 7423 159 ENSG00000273769.3 U52112.12 chrX 153880672 153888990 + processed_transcript NOVEL OTTHUMG00000058499.2 8319 1392 15 ENSG00000126895.12 AVPR2 chrX 153902531 153907166 + protein_coding KNOWN OTTHUMG00000024227.4 4636 2231 16 ENSG00000187999.4 HNRNPA1P61 chr2 33636502 33637425 + processed_pseudogene KNOWN OTTHUMG00000152163.3 924 924 1 ENSG00000089820.14 ARHGAP4 chrX 153907367 153934999 - protein_coding KNOWN OTTHUMG00000024226.46 27633 5580 254 ENSG00000102030.14 NAA10 chrX 153929242 153935223 - protein_coding KNOWN OTTHUMG00000024225.6 5982 4742 87 ENSG00000102032.11 RENBP chrX 153935263 153944691 - protein_coding KNOWN OTTHUMG00000024224.8 9429 2057 65 ENSG00000172534.12 HCFC1 chrX 153947553 153971807 - protein_coding KNOWN OTTHUMG00000024222.5 24255 9004 65 ENSG00000235802.1 HCFC1-AS1 chrX 153969325 153970087 + antisense NOVEL OTTHUMG00000024223.1 763 350 2 ENSG00000177854.7 TMEM187 chrX 153972327 153983195 + protein_coding KNOWN OTTHUMG00000024220.4 10869 1924 6 ENSG00000265176.1 MIR3202-1 chrX 153981097 153981177 + miRNA KNOWN NA 81 81 1 ENSG00000184216.10 IRAK1 chrX 154010500 154019980 - protein_coding KNOWN OTTHUMG00000024228.44 9481 4001 102 ENSG00000211524.3 MIR718 chrX 154019920 154019995 - miRNA KNOWN NA 76 76 1 ENSG00000169057.18 MECP2 chrX 154021573 154137103 - protein_coding KNOWN OTTHUMG00000024229.13 115531 18280 69 ENSG00000203386.5 LINC01317 chr2 33706886 34297753 + lincRNA NOVEL OTTHUMG00000152138.1 590868 1089 13 ENSG00000102076.8 OPN1LW chrX 154144224 154159032 + protein_coding KNOWN OTTHUMG00000034295.6 14809 1261 14 ENSG00000277008.1 TEX28P2 chrX 154159357 154176349 - unprocessed_pseudogene KNOWN OTTHUMG00000022713.4 16993 1221 3 ENSG00000268221.4 OPN1MW chrX 154182596 154196135 + protein_coding KNOWN OTTHUMG00000022652.8 13540 1272 14 ENSG00000274962.1 TEX28P1 chrX 154196471 154213487 - unprocessed_pseudogene KNOWN OTTHUMG00000024230.4 17017 1221 3 ENSG00000166160.8 OPN1MW2 chrX 154219756 154233286 + protein_coding KNOWN OTTHUMG00000024231.5 13531 1261 14 ENSG00000277009.1 CH17-128G5.1 chrX 154233615 154251288 - unprocessed_pseudogene KNOWN OTTHUMG00000188366.1 17674 1216 3 ENSG00000269433.3 OPN1MW chrX 154257538 154271805 + protein_coding KNOWN OTTHUMG00000189499.1 14268 1998 6 ENSG00000278057.3 TEX28 chrX 154271265 154295853 - protein_coding KNOWN OTTHUMG00000022654.8 24589 1862 18 ENSG00000007350.15 TKTL1 chrX 154295671 154330350 + protein_coding KNOWN OTTHUMG00000022707.7 34680 3650 50 ENSG00000231830.1 XX-FW83128A1.2 chrX 154333960 154335037 - antisense NOVEL OTTHUMG00000022655.2 1078 341 2 ENSG00000239649.3 MYADML chr2 33722721 33728207 - transcribed_processed_pseudogene KNOWN OTTHUMG00000099399.3 5487 2528 5 ENSG00000196924.13 FLNA chrX 154348524 154374638 - protein_coding KNOWN OTTHUMG00000022712.29 26115 10585 387 ENSG00000102119.9 EMD chrX 154379197 154381523 + protein_coding KNOWN OTTHUMG00000033186.5 2327 2020 39 ENSG00000147403.15 RPL10 chrX 154389955 154409168 + protein_coding KNOWN OTTHUMG00000033189.12 19214 4825 87 ENSG00000280195.1 XX-FW83563B9.5 chrX 154396878 154398816 - antisense NOVEL OTTHUMG00000057501.1 1939 1939 1 ENSG00000207165.1 SNORA70 chrX 154400281 154400415 + snoRNA KNOWN NA 135 135 1 ENSG00000013563.12 DNASE1L1 chrX 154401238 154412112 - protein_coding KNOWN OTTHUMG00000033188.27 10875 4130 76 ENSG00000102125.14 TAZ chrX 154411518 154421726 + protein_coding KNOWN OTTHUMG00000033190.19 10209 4721 140 ENSG00000197180.2 CH17-340M24.3 chrX 154424380 154428479 - lincRNA NOVEL OTTHUMG00000189028.1 4100 598 2 ENSG00000071553.15 ATP6AP1 chrX 154428632 154436516 + protein_coding KNOWN OTTHUMG00000033291.9 7885 4884 69 ENSG00000203879.10 GDI1 chrX 154436913 154443467 + protein_coding KNOWN OTTHUMG00000033293.9 6555 5256 67 ENSG00000264267.1 AC069303.1 chr2 33786038 33786138 - miRNA NOVEL NA 101 101 1 ENSG00000071859.13 FAM50A chrX 154444126 154450654 + protein_coding KNOWN OTTHUMG00000033292.11 6529 2567 51 ENSG00000276350.1 MIR6858 chrX 154450320 154450386 + miRNA KNOWN NA 67 67 1 ENSG00000130827.6 PLXNA3 chrX 154458281 154477779 + protein_coding KNOWN OTTHUMG00000033290.6 19499 11710 55 ENSG00000196976.6 LAGE3 chrX 154477769 154479257 - protein_coding KNOWN OTTHUMG00000033294.4 1489 949 7 ENSG00000102178.11 UBL4A chrX 154483717 154486670 - protein_coding KNOWN OTTHUMG00000013370.5 2954 2630 22 ENSG00000126903.14 SLC10A3 chrX 154487306 154490690 - protein_coding KNOWN OTTHUMG00000013369.6 3385 2247 14 ENSG00000264484.2 RN7SL697P chrX 154495815 154496113 - misc_RNA KNOWN NA 299 299 1 ENSG00000071889.15 FAM3A chrX 154506159 154516242 - protein_coding KNOWN OTTHUMG00000013418.19 10084 5098 155 ENSG00000261773.1 WI2-89031B12.1 chrX 154517840 154518631 - sense_overlapping NOVEL OTTHUMG00000175554.3 792 792 1 ENSG00000160211.14 G6PD chrX 154531391 154547572 - protein_coding KNOWN OTTHUMG00000024237.7 16182 3709 89 ENSG00000235064.1 SLC25A5P2 chr2 33839782 33840678 - processed_pseudogene KNOWN OTTHUMG00000152137.1 897 897 1 ENSG00000269335.4 IKBKG chrX 154541199 154565046 + protein_coding KNOWN OTTHUMG00000024234.16 23848 3529 108 ENSG00000279245.1 FAM223A chrX 154571248 154571960 + lincRNA NOVEL OTTHUMG00000057425.3 713 713 2 ENSG00000273041.1 ATF4P2 chrX 154580926 154581998 + processed_pseudogene KNOWN OTTHUMG00000188664.2 1073 1073 1 ENSG00000268651.2 CTAG1A chrX 154585143 154586821 + protein_coding KNOWN OTTHUMG00000024238.3 1679 993 8 ENSG00000232155.1 AF277315.19 chrX 154605858 154605950 + processed_pseudogene KNOWN OTTHUMG00000101273.1 93 93 1 ENSG00000184033.11 CTAG1B chrX 154617604 154619282 - protein_coding KNOWN OTTHUMG00000024232.2 1679 1003 10 ENSG00000273773.1 RP5-865E18.2 chrX 154620096 154620171 + unprocessed_pseudogene KNOWN OTTHUMG00000188045.1 76 76 1 ENSG00000213338.3 ATF4P1 chrX 154622428 154623500 - processed_pseudogene KNOWN OTTHUMG00000189741.1 1073 1073 1 ENSG00000272681.2 FAM223A chrX 154632470 154633182 - lincRNA KNOWN OTTHUMG00000188665.1 713 713 2 ENSG00000275882.1 IKBKGP1 chrX 154639978 154648275 - unprocessed_pseudogene KNOWN OTTHUMG00000188230.2 8298 1073 8 ENSG00000280226.1 AC004824.2 chr1 17329012 17331796 - protein_coding KNOWN NA 2785 189 2 ENSG00000266861.1 AC097506.1 chr2 33927384 33927472 + miRNA NOVEL NA 89 89 1 ENSG00000126890.13 CTAG2 chrX 154651972 154653579 - protein_coding KNOWN OTTHUMG00000024239.3 1608 993 5 ENSG00000226141.1 AF277315.13 chrX 154654546 154655325 + unprocessed_pseudogene KNOWN OTTHUMG00000040487.2 780 332 2 ENSG00000237619.1 OR3B1P chrX 154658790 154659682 - unprocessed_pseudogene KNOWN OTTHUMG00000024240.2 893 893 1 ENSG00000160219.10 GAB3 chrX 154675249 154751583 - protein_coding KNOWN OTTHUMG00000024245.9 76335 5272 43 ENSG00000130826.14 DKC1 chrX 154762742 154777689 + protein_coding KNOWN OTTHUMG00000024242.9 14948 4203 89 ENSG00000206948.1 SNORA36A chrX 154768528 154768659 + snoRNA KNOWN NA 132 132 1 ENSG00000281135.1 MIR664B chrX 154768596 154768656 + miRNA KNOWN NA 61 61 1 ENSG00000206693.1 SNORA56 chrX 154774998 154775126 + snoRNA KNOWN NA 129 129 1 ENSG00000130830.13 MPP1 chrX 154778684 154821007 - protein_coding KNOWN OTTHUMG00000024244.8 42324 5396 110 ENSG00000229237.2 HMGN1P37 chrX 154817099 154817401 - processed_pseudogene KNOWN OTTHUMG00000024241.4 303 303 1 ENSG00000276246.1 AC009499.1 chr2 34017971 34018067 - miRNA NOVEL NA 97 97 1 ENSG00000203870.5 SMIM9 chrX 154823348 154834662 - protein_coding KNOWN OTTHUMG00000024243.3 11315 1225 9 ENSG00000185010.12 F8 chrX 154835788 155026940 - protein_coding KNOWN OTTHUMG00000022688.13 191153 9609 44 ENSG00000274183.1 H2AFB1 chrX 154884972 154885558 + protein_coding KNOWN OTTHUMG00000034291.2 587 587 1 ENSG00000277203.1 F8A1 chrX 154886349 154888061 + protein_coding KNOWN OTTHUMG00000013500.3 1713 1713 1 ENSG00000221533.1 MIR1184-1 chrX 154887360 154887458 - miRNA KNOWN NA 99 99 1 ENSG00000224069.1 CTD-2183H9.7 chrX 154897561 154898092 - processed_pseudogene KNOWN OTTHUMG00000128681.1 532 532 1 ENSG00000237859.1 EEF1A1P31 chrX 154908885 154919103 - processed_pseudogene KNOWN OTTHUMG00000013503.2 10219 1133 2 ENSG00000233688.1 CTD-2183H9.3 chrX 154919578 154920182 - processed_pseudogene KNOWN OTTHUMG00000013501.1 605 605 1 ENSG00000165775.16 FUNDC2 chrX 155025980 155060303 + protein_coding KNOWN OTTHUMG00000013504.5 34324 10252 28 ENSG00000214827.8 MTCP1 chrX 155061622 155147937 - protein_coding KNOWN OTTHUMG00000156241.4 86316 2990 21 ENSG00000237790.1 LINC01318 chr2 34067226 34069550 + lincRNA NOVEL OTTHUMG00000152139.1 2325 597 3 ENSG00000182712.14 CMC4 chrX 155061622 155071362 - protein_coding KNOWN OTTHUMG00000158504.3 9741 1539 6 ENSG00000185515.13 BRCC3 chrX 155071420 155123074 + protein_coding KNOWN OTTHUMG00000022658.5 51655 3182 95 ENSG00000235991.4 RP11-143H17.1 chrX 155137111 155156503 + unprocessed_pseudogene KNOWN OTTHUMG00000034290.1 19393 755 8 ENSG00000155959.9 VBP1 chrX 155197007 155239817 + protein_coding KNOWN OTTHUMG00000022666.3 42811 2018 23 ENSG00000224978.1 RP13-228J13.9 chrX 155212921 155213638 - processed_pseudogene KNOWN OTTHUMG00000022668.1 718 335 2 ENSG00000155961.4 RAB39B chrX 155258241 155264589 - protein_coding KNOWN OTTHUMG00000022659.2 6349 3505 2 ENSG00000155962.11 CLIC2 chrX 155276211 155334657 - protein_coding KNOWN OTTHUMG00000022660.3 58447 2840 23 ENSG00000225008.1 RP13-228J13.6 chrX 155290360 155291353 - processed_pseudogene KNOWN OTTHUMG00000022667.1 994 994 1 ENSG00000228986.1 RP13-228J13.8 chrX 155292169 155293432 + processed_pseudogene KNOWN OTTHUMG00000022665.2 1264 973 2 ENSG00000230491.1 RP13-228J13.10 chrX 155310247 155310490 + processed_pseudogene KNOWN OTTHUMG00000022664.1 244 244 1 ENSG00000226785.1 AC073218.1 chr2 34383788 34635340 + lincRNA NOVEL OTTHUMG00000152141.1 251553 567 3 ENSG00000224216.1 RP13-228J13.1 chrX 155334858 155351957 - antisense NOVEL OTTHUMG00000022662.2 17100 1721 4 ENSG00000230578.3 RP13-228J13.5 chrX 155348752 155349799 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000022663.4 1048 432 4 ENSG00000277858.1 H2AFB2 chrX 155380787 155381134 + protein_coding KNOWN OTTHUMG00000034292.1 348 348 1 ENSG00000274791.1 F8A2 chrX 155382115 155383230 + protein_coding KNOWN OTTHUMG00000034293.1 1116 1116 1 ENSG00000221190.1 MIR1184-1 chrX 155383100 155383198 - miRNA KNOWN NA 99 99 1 ENSG00000277150.1 F8A3 chrX 155456914 155458672 - protein_coding KNOWN OTTHUMG00000034289.1 1759 1759 1 ENSG00000221603.1 MIR1184-3 chrX 155457517 155457615 + miRNA KNOWN NA 99 99 1 ENSG00000277745.1 H2AFB3 chrX 155459415 155460005 - protein_coding KNOWN OTTHUMG00000022670.2 591 591 1 ENSG00000224533.4 TMLHE-AS1 chrX 155466540 155611616 + antisense NOVEL OTTHUMG00000022672.1 145077 1845 6 ENSG00000225393.1 RP11-218L14.4 chrX 155468286 155487046 + antisense NOVEL OTTHUMG00000022671.1 18761 553 2 ENSG00000212025.3 AC011748.1 chr2 34403664 34403757 + miRNA NOVEL NA 94 94 1 ENSG00000185973.9 TMLHE chrX 155490115 155669944 - protein_coding KNOWN OTTHUMG00000022674.2 179830 3922 23 ENSG00000168939.9 SPRY3 chrX 155767812 155782459 + protein_coding KNOWN OTTHUMG00000022675.3 14648 9019 2 ENSG00000237801.4 AMDP1 chrX 155828585 155829576 - processed_pseudogene KNOWN OTTHUMG00000022673.2 992 992 1 ENSG00000237040.4 DPH3P2 chrX 155875636 155875885 + processed_pseudogene KNOWN OTTHUMG00000022680.1 250 250 1 ENSG00000124333.13 VAMP7 chrX 155881293 155943769 + protein_coding KNOWN OTTHUMG00000022679.2 62477 2667 44 ENSG00000228410.4 TCEB1P24 chrX 155978992 155979325 - processed_pseudogene KNOWN OTTHUMG00000040493.1 334 334 1 ENSG00000223484.5 TRPC6P chrX 155985370 155986249 - processed_pseudogene KNOWN OTTHUMG00000022681.1 880 880 1 ENSG00000124334.15 IL9R chrX 155997581 156010817 + protein_coding KNOWN OTTHUMG00000022720.1 13237 2504 24 ENSG00000270726.4 AJ271736.10 chrX 156004218 156022236 + processed_transcript NOVEL OTTHUMG00000184987.2 18019 773 4 ENSG00000185203.10 WASIR1 chrX 156014623 156016837 - antisense NOVEL OTTHUMG00000022676.3 2215 1054 2 ENSG00000228262.7 LINC01320 chr2 34677555 34738231 + lincRNA NOVEL OTTHUMG00000152144.6 60677 4022 73 ENSG00000182484.13 WASH6P chrX 156020826 156025710 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000022677.4 4885 4618 71 ENSG00000276543.3 AJ271736.1 chrX 156022631 156022698 + miRNA NOVEL NA 68 68 1 ENSG00000227159.6 DDX11L16 chrX 156025664 156027877 - unprocessed_pseudogene KNOWN OTTHUMG00000022678.1 2214 1306 5 ENSGR0000228572.5 LL0YNC03-29C1.1 chrY 253743 255091 + unprocessed_pseudogene KNOWN OTTHUMG00000046372.2 1349 259 2 ENSGR0000182378.11 PLCXD1 chrY 276322 303356 + protein_coding KNOWN OTTHUMG00000022693.4 27035 6191 57 ENSGR0000178605.11 GTPBP6 chrY 304529 318819 - protein_coding KNOWN OTTHUMG00000022694.3 14291 2964 14 ENSGR0000226179.4 LINC00685 chrY 320990 321851 + antisense KNOWN OTTHUMG00000021049.1 862 428 2 ENSGR0000167393.15 PPP2R3B chrY 333963 386955 - protein_coding KNOWN OTTHUMG00000021052.2 52993 9015 56 ENSGR0000281849.1 RP13-465B17.4 chrY 386980 405579 + antisense NOVEL OTTHUMG00000189992.1 18600 484 2 ENSGR0000275287.3 Metazoa_SRP chrY 388100 388389 - misc_RNA NOVEL NA 290 290 1 ENSG00000272027.2 RP11-529E15.1 chr2 34692290 34703606 - lincRNA NOVEL OTTHUMG00000185622.2 11317 912 5 ENSGR0000280767.1 RP13-465B17.5 chrY 419157 421980 + lincRNA NOVEL OTTHUMG00000189993.1 2824 515 2 ENSGR0000234958.4 FABP5P13 chrY 523775 524102 - processed_pseudogene KNOWN OTTHUMG00000021050.1 328 328 1 ENSGR0000229232.4 KRT18P53 chrY 545236 545352 - processed_pseudogene KNOWN OTTHUMG00000021051.1 117 117 1 ENSGR0000185960.11 SHOX chrY 624344 659411 + protein_coding KNOWN OTTHUMG00000021053.4 35068 4384 22 ENSGR0000237531.4 RP11-309M23.1 chrY 990221 994365 + lincRNA NOVEL OTTHUMG00000021054.1 4145 588 2 ENSGR0000225661.5 RPL14P5 chrY 1008503 1010101 - processed_pseudogene KNOWN OTTHUMG00000021055.1 1599 730 3 ENSGR0000205755.9 CRLF2 chrY 1187549 1212750 - protein_coding KNOWN OTTHUMG00000067432.2 25202 2010 32 ENSGR0000198223.13 CSF2RA chrY 1268800 1310381 + protein_coding KNOWN OTTHUMG00000012533.6 41582 3830 172 ENSGR0000264510.4 BX649553.3 chrY 1291755 1291828 + miRNA NOVEL NA 74 74 1 ENSGR0000264819.4 BX649553.4 chrY 1292094 1292167 + miRNA NOVEL NA 74 74 1 ENSG00000232153.2 AC073218.3 chr2 34734975 34737118 - lincRNA NOVEL OTTHUMG00000152140.2 2144 171 2 ENSGR0000263980.4 BX649553.2 chrY 1293615 1293689 + miRNA NOVEL NA 75 75 1 ENSGR0000265658.4 MIR3690 chrY 1293918 1293992 + miRNA KNOWN NA 75 75 1 ENSGR0000263835.4 BX649553.1 chrY 1294132 1294206 + miRNA NOVEL NA 75 75 1 ENSGR0000223274.4 RNA5SP498 chrY 1300256 1300375 - rRNA KNOWN NA 120 120 1 ENSGR0000185291.9 IL3RA chrY 1336616 1382689 + protein_coding KNOWN OTTHUMG00000021059.3 46074 1710 27 ENSGR0000169100.11 SLC25A6 chrY 1386152 1392724 - protein_coding KNOWN OTTHUMG00000021058.1 6573 2164 12 ENSGR0000236871.5 LINC00106 chrY 1396427 1399402 + lincRNA KNOWN OTTHUMG00000021061.3 2976 592 5 ENSGR0000236017.6 ASMTL-AS1 chrY 1401769 1414028 + antisense KNOWN OTTHUMG00000021056.3 12260 1335 15 ENSGR0000169093.13 ASMTL chrY 1403139 1453762 - protein_coding KNOWN OTTHUMG00000021057.1 50624 3506 46 ENSGR0000182162.8 P2RY8 chrY 1462572 1537107 - protein_coding KNOWN OTTHUMG00000021060.1 74536 4459 4 ENSG00000226994.6 AC012593.1 chr2 34799850 35185689 + lincRNA NOVEL OTTHUMG00000152143.6 385840 4324 74 ENSGR0000197976.9 AKAP17A chrY 1591593 1602514 + protein_coding KNOWN OTTHUMG00000021063.3 10922 4075 15 ENSGR0000196433.10 ASMT chrY 1615001 1643081 + protein_coding KNOWN OTTHUMG00000021065.2 28081 1846 28 ENSGR0000223511.4 RP13-297E16.4 chrY 1732584 1755985 + lincRNA NOVEL OTTHUMG00000021062.2 23402 747 5 ENSGR0000234622.4 RP13-297E16.5 chrY 1767347 1768776 + lincRNA NOVEL OTTHUMG00000021064.1 1430 548 2 ENSGR0000169084.11 DHRSX chrY 2219516 2502805 - protein_coding KNOWN OTTHUMG00000021068.3 283290 3620 34 ENSGR0000223571.4 DHRSX-IT1 chrY 2334295 2336410 - sense_intronic NOVEL OTTHUMG00000067406.1 2116 651 2 ENSGR0000214717.8 ZBED1 chrY 2486414 2500967 - protein_coding KNOWN OTTHUMG00000021069.5 14554 4755 10 ENSGR0000277120.3 MIR6089 chrY 2609191 2609254 + miRNA KNOWN NA 64 64 1 ENSGR0000223773.5 CD99P1 chrY 2609348 2657229 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000021071.4 47882 5921 36 ENSGR0000230542.4 LINC00102 chrY 2612988 2615347 - lincRNA KNOWN OTTHUMG00000021072.1 2360 1340 2 ENSG00000264352.2 RN7SL602P chr2 34809233 34809556 - misc_RNA KNOWN NA 324 324 1 ENSGR0000002586.16 CD99 chrY 2691179 2741309 + protein_coding KNOWN OTTHUMG00000021073.6 50131 3284 94 ENSGR0000168939.9 SPRY3 chrY 56954332 56968979 + protein_coding KNOWN OTTHUMG00000022675.3 14648 9019 2 ENSGR0000237801.4 AMDP1 chrY 57015105 57016096 - processed_pseudogene KNOWN OTTHUMG00000022673.2 992 992 1 ENSGR0000237040.4 DPH3P2 chrY 57062156 57062405 + processed_pseudogene KNOWN OTTHUMG00000022680.1 250 250 1 ENSGR0000124333.13 VAMP7 chrY 57067813 57130289 + protein_coding KNOWN OTTHUMG00000022679.2 62477 2667 44 ENSGR0000228410.4 TCEB1P24 chrY 57165512 57165845 - processed_pseudogene KNOWN OTTHUMG00000040493.1 334 334 1 ENSGR0000223484.5 TRPC6P chrY 57171890 57172769 - processed_pseudogene KNOWN OTTHUMG00000022681.1 880 880 1 ENSGR0000124334.15 IL9R chrY 57184101 57197337 + protein_coding KNOWN OTTHUMG00000022720.1 13237 2504 24 ENSGR0000270726.4 AJ271736.10 chrY 57190738 57208756 + processed_transcript NOVEL OTTHUMG00000184987.2 18019 773 4 ENSGR0000185203.10 WASIR1 chrY 57201143 57203357 - antisense NOVEL OTTHUMG00000022676.3 2215 1054 2 ENSG00000276747.1 PADI6 chr1 17372196 17401699 + protein_coding KNOWN OTTHUMG00000002372.7 29504 2396 16 ENSG00000237320.2 AC019064.1 chr2 34998273 35000160 - lincRNA NOVEL OTTHUMG00000152142.2 1888 499 3 ENSGR0000182484.13 WASH6P chrY 57207346 57212230 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000022677.4 4885 4618 71 ENSGR0000276543.3 AJ271736.1 chrY 57209151 57209218 + miRNA NOVEL NA 68 68 1 ENSGR0000227159.6 DDX11L16 chrY 57212184 57214397 - unprocessed_pseudogene KNOWN OTTHUMG00000022678.1 2214 1306 5 ENSG00000251841.1 RNU6-1334P chrY 2784749 2784853 + snRNA KNOWN NA 105 105 1 ENSG00000184895.7 SRY chrY 2786855 2787699 - protein_coding KNOWN OTTHUMG00000036084.1 845 845 1 ENSG00000237659.1 RNASEH2CP1 chrY 2789827 2790328 + processed_pseudogene KNOWN OTTHUMG00000036081.1 502 502 1 ENSG00000232195.1 TOMM22P2 chrY 2827982 2828218 + processed_pseudogene KNOWN OTTHUMG00000036083.2 237 237 1 ENSG00000129824.14 RPS4Y1 chrY 2841486 2932000 + protein_coding KNOWN OTTHUMG00000036152.3 90515 2275 20 ENSG00000227289.1 HSFY3P chrY 2881683 2883652 - unprocessed_pseudogene KNOWN OTTHUMG00000036161.1 1970 1191 2 ENSG00000229163.2 NAP1L1P2 chrY 2929001 2931120 - processed_pseudogene KNOWN OTTHUMG00000036154.2 2120 1089 3 ENSG00000196085.5 AC013442.1 chr2 35219377 35219604 - processed_pseudogene KNOWN OTTHUMG00000152164.3 228 228 1 ENSG00000278847.1 RP11-414C23.1 chrY 2934406 2934771 - lincRNA NOVEL OTTHUMG00000188134.1 366 366 1 ENSG00000067646.10 ZFY chrY 2935281 2982506 + protein_coding KNOWN OTTHUMG00000036159.2 47226 5527 38 ENSG00000233070.1 ZFY-AS1 chrY 2966844 3002626 - antisense NOVEL OTTHUMG00000036156.1 35783 796 6 ENSG00000223600.1 EEF1A1P41 chrY 2995067 2995273 - processed_pseudogene KNOWN OTTHUMG00000036158.1 207 207 1 ENSG00000231535.4 LINC00278 chrY 3002912 3102272 + lincRNA NOVEL OTTHUMG00000036157.1 99361 775 7 ENSG00000234652.1 AGPAT5P1 chrY 3293808 3294826 + processed_pseudogene KNOWN OTTHUMG00000036179.1 1019 1019 1 ENSG00000216777.1 PRRC2CP1 chrY 3549652 3549810 - processed_pseudogene KNOWN OTTHUMG00000036160.1 159 159 1 ENSG00000176679.8 TGIF2LY chrY 3579041 3580041 + protein_coding KNOWN OTTHUMG00000036153.3 1001 1001 3 ENSG00000277537.1 AC019058.1 chrY 3630144 3630229 + miRNA NOVEL NA 86 86 1 ENSG00000232927.1 USP12PY chrY 3682805 3683868 + processed_pseudogene KNOWN OTTHUMG00000036183.1 1064 1064 1 ENSG00000265301.1 MIR548AD chr2 35471405 35471486 + miRNA KNOWN NA 82 82 1 ENSG00000225653.1 RNF19BPY chrY 3777997 3779546 - processed_pseudogene KNOWN OTTHUMG00000036180.1 1550 1550 1 ENSG00000218410.1 AC012078.2 chrY 3851224 3852869 - processed_pseudogene KNOWN OTTHUMG00000036181.2 1646 1646 1 ENSG00000229518.1 UBE2V1P3 chrY 3866306 3866722 - processed_pseudogene KNOWN OTTHUMG00000036182.1 417 417 1 ENSG00000229308.1 AC010084.1 chrY 4036497 4100320 + lincRNA NOVEL OTTHUMG00000036214.1 63824 559 2 ENSG00000252900.1 RNU6-303P chrY 4174985 4175090 - snRNA KNOWN NA 106 106 1 ENSG00000225878.1 SERBP1P2 chrY 4801685 4802848 - processed_pseudogene KNOWN OTTHUMG00000036215.1 1164 1164 1 ENSG00000277930.1 RP11-122L9.1 chrY 4993858 4999650 - lincRNA NOVEL OTTHUMG00000188135.1 5793 844 5 ENSG00000099715.13 PCDH11Y chrY 5000226 5742224 + protein_coding KNOWN OTTHUMG00000035105.5 741999 11672 30 ENSG00000252468.1 RNU2-57P chrY 5019076 5019266 + snRNA KNOWN NA 191 191 1 ENSG00000231341.1 VDAC1P6 chrY 5207215 5208069 - processed_pseudogene KNOWN OTTHUMG00000035151.1 855 855 1 ENSG00000207255.1 RNU6-1117P chr2 35471605 35471708 + snRNA KNOWN NA 104 104 1 ENSG00000235001.3 EIF4A1P2 chrY 5337745 5338964 - processed_pseudogene KNOWN OTTHUMG00000035195.1 1220 1220 1 ENSG00000214207.2 KRT18P10 chrY 5573145 5574431 + processed_pseudogene KNOWN OTTHUMG00000035193.1 1287 1287 1 ENSG00000252059.2 AC012667.1 chrY 5573928 5574019 + miRNA NOVEL NA 92 92 1 ENSG00000278585.1 SNX3P1Y chrY 5634480 5634655 - processed_pseudogene KNOWN OTTHUMG00000187995.1 176 176 1 ENSG00000235175.1 RPL26P37 chrY 5793300 5793737 - processed_pseudogene KNOWN OTTHUMG00000035194.1 438 438 1 ENSG00000251879.2 AC010874.1 chrY 5874246 5874338 + miRNA NOVEL NA 93 93 1 ENSG00000237195.1 DLGAP5P1 chrY 6158802 6159265 + processed_pseudogene KNOWN OTTHUMG00000036007.1 464 464 1 ENSG00000251275.1 AC006335.2 chrY 6241768 6243629 - unprocessed_pseudogene KNOWN OTTHUMG00000036005.1 1862 343 3 ENSG00000237069.2 TTTY23B chrY 6242446 6243610 - lincRNA KNOWN OTTHUMG00000036006.1 1165 512 3 ENSG00000250204.1 AC006335.6 chrY 6243295 6245283 - unprocessed_pseudogene KNOWN OTTHUMG00000040947.1 1989 549 3 ENSG00000229013.1 AC083939.1 chr2 35471716 35471841 + processed_pseudogene KNOWN OTTHUMG00000152540.2 126 126 1 ENSG00000168757.11 TSPY2 chrY 6246223 6249019 + protein_coding KNOWN OTTHUMG00000040957.3 2797 1941 26 ENSG00000234830.6 FAM197Y9 chrY 6256267 6263953 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000040949.2 7687 2551 10 ENSG00000238235.1 TSPY11P chrY 6266593 6269275 + unprocessed_pseudogene KNOWN OTTHUMG00000040946.1 2683 1045 6 ENSG00000275352.1 RP11-492C2.1 chrY 6273579 6274065 - unprocessed_pseudogene KNOWN OTTHUMG00000187996.1 487 292 3 ENSG00000234583.1 TSPY19P chrY 6303957 6305074 - unprocessed_pseudogene KNOWN OTTHUMG00000040953.1 1118 509 2 ENSG00000235094.2 AC006335.10 chrY 6306042 6307920 + unprocessed_pseudogene KNOWN OTTHUMG00000040948.1 1879 547 4 ENSG00000242879.1 AC006335.11 chrY 6307710 6309587 + unprocessed_pseudogene KNOWN OTTHUMG00000040950.1 1878 330 3 ENSG00000223744.1 RBMY2GP chrY 6328052 6343323 + unprocessed_pseudogene KNOWN OTTHUMG00000040954.1 15272 1034 7 ENSG00000229643.1 LINC00280 chrY 6357219 6361413 - lincRNA NOVEL OTTHUMG00000040955.1 4195 448 3 ENSG00000129816.5 TTTY1B chrY 6390431 6411564 + lincRNA KNOWN OTTHUMG00000040984.1 21134 910 5 ENSG00000234587.1 MRPL50P1 chr2 35724759 35725142 - processed_pseudogene KNOWN OTTHUMG00000152145.1 384 384 1 ENSG00000212856.5 TTTY2B chrY 6406244 6424145 - lincRNA KNOWN OTTHUMG00000040980.1 17902 3168 7 ENSG00000237563.1 TTTY21B chrY 6443434 6447077 + lincRNA KNOWN OTTHUMG00000040983.1 3644 307 2 ENSG00000147753.8 TTTY7 chrY 6449468 6457906 + lincRNA KNOWN OTTHUMG00000040981.1 8439 1466 16 ENSG00000185700.9 TTTY8B chrY 6470773 6473630 - lincRNA KNOWN OTTHUMG00000040982.1 2858 708 6 ENSG00000235895.1 AC010154.2 chrY 6492976 6496757 - unprocessed_pseudogene KNOWN OTTHUMG00000040985.1 3782 269 2 ENSG00000232620.1 TSPY17P chrY 6520463 6520929 + unprocessed_pseudogene KNOWN OTTHUMG00000036523.1 467 467 1 ENSG00000224953.1 SRIP3 chrY 6718962 6719180 - processed_pseudogene KNOWN OTTHUMG00000035294.1 219 219 1 ENSG00000274365.1 RP11-507A3.1 chrY 6789153 6789344 + processed_pseudogene KNOWN OTTHUMG00000187997.1 192 192 1 ENSG00000233634.1 GOT2P5 chrY 6837707 6838252 + processed_pseudogene KNOWN OTTHUMG00000035295.1 546 546 1 ENSG00000099721.12 AMELY chrY 6865918 6874027 - protein_coding KNOWN OTTHUMG00000035297.2 8110 844 12 ENSG00000233752.1 AC009414.1 chr2 36299388 36299830 - processed_pseudogene KNOWN OTTHUMG00000152150.1 443 443 1 ENSG00000237701.1 ATP5JP1 chrY 6900753 6901372 + processed_pseudogene KNOWN OTTHUMG00000035296.1 620 322 2 ENSG00000092377.12 TBL1Y chrY 6910686 7091683 + protein_coding KNOWN OTTHUMG00000035299.1 180998 2407 55 ENSG00000273906.1 RP11-115H13.1 chrY 6918682 6920791 + sense_intronic NOVEL OTTHUMG00000188136.1 2110 2110 1 ENSG00000232583.1 GPR143P chrY 7100733 7106502 - unprocessed_pseudogene KNOWN OTTHUMG00000035300.1 5770 205 2 ENSG00000099725.13 PRKY chrY 7273972 7381548 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000035301.3 107577 7674 20 ENSG00000252633.1 RN7SKP282 chrY 7324297 7324595 - misc_RNA KNOWN NA 299 299 1 ENSG00000251996.1 Y_RNA chrY 7341531 7341642 + misc_RNA NOVEL NA 112 112 1 ENSG00000252155.1 RNU6-941P chrY 7378672 7378779 + snRNA KNOWN NA 108 108 1 ENSG00000252472.1 RNU6-521P chrY 7423054 7423158 - snRNA KNOWN NA 105 105 1 ENSG00000275280.1 RP11-105L10.1 chrY 7656968 7657352 + processed_pseudogene KNOWN OTTHUMG00000187999.1 385 385 1 ENSG00000260025.1 RP11-490M8.1 chr2 36354749 36355114 - lincRNA NOVEL OTTHUMG00000175796.1 366 366 1 ENSG00000238073.1 RBMY2HP chrY 7671743 7676024 - unprocessed_pseudogene KNOWN OTTHUMG00000041010.1 4282 720 5 ENSG00000223422.1 AC007274.2 chrY 7678899 7681028 + unprocessed_pseudogene KNOWN OTTHUMG00000041011.1 2130 662 5 ENSG00000236435.1 TSPY12P chrY 7687739 7689548 - unprocessed_pseudogene KNOWN OTTHUMG00000041014.1 1810 868 5 ENSG00000236690.2 AC007274.5 chrY 7690511 7692678 + unprocessed_pseudogene KNOWN OTTHUMG00000041016.1 2168 662 4 ENSG00000225520.1 TTTY16 chrY 7699357 7701247 - lincRNA KNOWN OTTHUMG00000041019.1 1891 192 2 ENSG00000234795.8 RFTN1P1 chrY 7712985 7809261 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000041013.2 96277 1842 10 ENSG00000237048.2 TTTY12 chrY 7804924 7810683 + lincRNA KNOWN OTTHUMG00000067560.1 5760 979 2 ENSG00000278854.1 RP11-109F19.1 chrY 7845485 7846454 - processed_pseudogene KNOWN OTTHUMG00000188003.1 970 671 2 ENSG00000215603.4 ZNF92P1Y chrY 7853686 7854876 - processed_pseudogene KNOWN OTTHUMG00000041017.2 1191 1191 1 ENSG00000273863.1 RP11-108F14.1 chrY 7905536 7907303 - processed_pseudogene KNOWN OTTHUMG00000188000.1 1768 713 2 ENSG00000150938.8 CRIM1 chr2 36355926 36551135 + protein_coding KNOWN OTTHUMG00000099419.2 195210 7122 37 ENSG00000244246.1 ZNF736P8Y chrY 7913422 7914090 - processed_pseudogene KNOWN OTTHUMG00000041058.1 669 669 1 ENSG00000229745.1 BPY2DP chrY 7932997 7937640 - unprocessed_pseudogene KNOWN OTTHUMG00000041060.1 4644 265 4 ENSG00000241200.1 ZNF736P7Y chrY 7990987 7991806 - processed_pseudogene KNOWN OTTHUMG00000041059.1 820 820 1 ENSG00000239893.1 ZNF736P9Y chrY 8068896 8070723 - processed_pseudogene KNOWN OTTHUMG00000041061.1 1828 1345 2 ENSG00000227204.1 RBMY2JP chrY 8127130 8144203 + unprocessed_pseudogene KNOWN OTTHUMG00000041057.1 17074 1059 9 ENSG00000225809.1 RBMY2KP chrY 8264449 8277188 - unprocessed_pseudogene KNOWN OTTHUMG00000041263.1 12740 992 7 ENSG00000215601.3 TSPY24P chrY 8280198 8282209 + unprocessed_pseudogene KNOWN OTTHUMG00000041266.1 2012 443 4 ENSG00000224634.1 ZNF736P6Y chrY 8350931 8352143 + processed_pseudogene KNOWN OTTHUMG00000041269.1 1213 1213 1 ENSG00000223955.1 MTND6P1 chrY 8363536 8363959 - processed_pseudogene KNOWN OTTHUMG00000041270.1 424 424 1 ENSG00000234179.1 MTCYBP1 chrY 8364032 8365150 + processed_pseudogene KNOWN OTTHUMG00000041271.1 1119 1119 1 ENSG00000273090.1 RP11-78I14.1 chr2 36513255 36513732 - antisense NOVEL OTTHUMG00000185847.1 478 478 1 ENSG00000226529.1 MTND1P1 chrY 8371663 8372030 + processed_pseudogene KNOWN OTTHUMG00000041272.1 368 368 1 ENSG00000234850.1 MTND2P3 chrY 8372241 8372710 + processed_pseudogene KNOWN OTTHUMG00000041273.1 470 470 1 ENSG00000227830.1 TRIM60P3Y chrY 8413037 8414054 - processed_pseudogene KNOWN OTTHUMG00000041274.1 1018 673 2 ENSG00000216824.2 ZNF736P10Y chrY 8418791 8419900 - processed_pseudogene KNOWN OTTHUMG00000041275.1 1110 1110 1 ENSG00000275866.1 RP11-17E15.1 chrY 8517364 8517748 - processed_pseudogene KNOWN OTTHUMG00000188027.1 385 385 1 ENSG00000279435.1 AC064829.1 chrY 8549671 8748740 - protein_coding KNOWN NA 199070 723 15 ENSG00000232348.2 LINC00279 chrY 8638294 8644842 + lincRNA NOVEL OTTHUMG00000041258.3 6549 473 3 ENSG00000233699.1 TTTY18 chrY 8683370 8683878 - lincRNA KNOWN OTTHUMG00000041267.1 509 221 2 ENSG00000279664.1 AC009491.2 chrY 8695281 8743495 + protein_coding KNOWN NA 48215 384 6 ENSG00000232419.1 TTTY19 chrY 8704472 8705283 + lincRNA KNOWN OTTHUMG00000041268.1 812 269 2 ENSG00000237613.2 FAM138A chr1 34554 36081 - lincRNA KNOWN OTTHUMG00000000960.1 1528 1219 5 ENSG00000177757.2 FAM87B chr1 817371 819837 + lincRNA KNOWN OTTHUMG00000002471.2 2467 1947 2 ENSG00000179051.12 RCC2 chr1 17406760 17439724 - protein_coding KNOWN OTTHUMG00000002513.1 32965 4126 27 ENSG00000171055.13 FEZ2 chr2 36531805 36646087 - protein_coding KNOWN OTTHUMG00000152148.3 114283 8938 87 ENSG00000279547.1 AC009491.1 chrY 8710885 8745985 + protein_coding KNOWN NA 35101 384 8 ENSG00000180910.7 TTTY11 chrY 8783310 8817382 - lincRNA KNOWN OTTHUMG00000041259.2 34073 837 5 ENSG00000228207.1 AC007967.2 chrY 8901203 8903276 - unprocessed_pseudogene KNOWN OTTHUMG00000041261.1 2074 625 4 ENSG00000173357.11 AC007967.3 chrY 8906224 8916073 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000041262.2 9850 1159 11 ENSG00000273731.1 RP11-373F14.1 chrY 8931069 8931454 - processed_pseudogene KNOWN OTTHUMG00000188053.1 386 386 1 ENSG00000230025.1 AC007967.4 chrY 8971751 8974095 - unprocessed_pseudogene KNOWN OTTHUMG00000041264.1 2345 558 3 ENSG00000231988.1 OFD1P3Y chrY 9030594 9039988 + unprocessed_pseudogene KNOWN OTTHUMG00000041410.1 9395 783 6 ENSG00000232235.1 CDY3P chrY 9166085 9167702 - processed_pseudogene KNOWN OTTHUMG00000041411.1 1618 1618 1 ENSG00000224408.1 USP9YP22 chrY 9183694 9185803 + unprocessed_pseudogene KNOWN OTTHUMG00000041407.1 2110 294 2 ENSG00000238154.1 USP9YP4 chrY 9189629 9204611 - unprocessed_pseudogene KNOWN OTTHUMG00000041408.1 14983 1745 6 ENSG00000270677.1 RP11-294L11.1 chr2 36656322 36656941 - processed_pseudogene KNOWN OTTHUMG00000184524.1 620 620 1 ENSG00000232924.1 TCEB1P4 chrY 9230915 9231247 + processed_pseudogene KNOWN OTTHUMG00000041409.1 333 333 1 ENSG00000197038.6 RBMY1A3P chrY 9311130 9322869 - unprocessed_pseudogene KNOWN OTTHUMG00000041536.1 11740 1404 10 ENSG00000275310.1 RP11-441G8.1 chrY 9325799 9326047 + processed_pseudogene KNOWN OTTHUMG00000188054.1 249 249 1 ENSG00000232808.1 TTTY20 chrY 9329880 9334832 - antisense KNOWN OTTHUMG00000041537.1 4953 259 2 ENSG00000233803.7 TSPY4 chrY 9337464 9340284 + protein_coding KNOWN OTTHUMG00000041529.2 2821 1959 19 ENSG00000225560.5 FAM197Y8 chrY 9347511 9356814 - transcribed_processed_pseudogene KNOWN OTTHUMG00000187512.1 9304 2863 11 ENSG00000229549.7 TSPY8 chrY 9357797 9380870 + protein_coding KNOWN OTTHUMG00000041531.1 23074 2379 25 ENSG00000228383.5 FAM197Y7 chrY 9367803 9377092 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000041532.2 9290 3039 16 ENSG00000188656.8 TSPY7P chrY 9378122 9380871 + unprocessed_pseudogene KNOWN OTTHUMG00000041533.1 2750 1114 6 ENSG00000237802.5 FAM197Y6 chrY 9388122 9397438 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000041534.2 9317 3054 16 ENSG00000205221.11 VIT chr2 36696690 36814792 + protein_coding KNOWN OTTHUMG00000152149.3 118103 3710 98 ENSG00000228927.8 TSPY3 chrY 9398421 9401223 + protein_coding KNOWN OTTHUMG00000041535.1 2803 1941 19 ENSG00000225516.5 FAM197Y5 chrY 9458613 9465974 - lincRNA KNOWN OTTHUMG00000187485.9 7362 1119 16 ENSG00000258992.4 TSPY1 chrY 9466955 9490081 + protein_coding KNOWN OTTHUMG00000171452.1 23127 1722 25 ENSG00000274196.3 FAM197Y4 chrY 9479053 9486239 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000187486.2 7187 827 9 ENSG00000238074.4 TSPY6P chrY 9487286 9490081 + protein_coding NOVEL OTTHUMG00000187491.1 2796 1160 6 ENSG00000230066.4 FAM197Y3 chrY 9497287 9506566 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000041521.2 9280 2990 13 ENSG00000270073.1 AC006156.2 chrY 9507596 9510175 + unprocessed_pseudogene KNOWN OTTHUMG00000041522.1 2580 926 7 ENSG00000234803.6 FAM197Y2 chrY 9517599 9526897 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000041523.2 9299 3062 15 ENSG00000236424.6 TSPY10 chrY 9527880 9530682 + protein_coding KNOWN OTTHUMG00000041524.1 2803 1941 19 ENSG00000224336.2 FAM197Y1 chrY 9544917 9547147 - unprocessed_pseudogene KNOWN OTTHUMG00000187490.1 2231 764 5 ENSG00000279519.1 RP11-288C18.1 chr2 36839922 36842539 - TEC KNOWN OTTHUMG00000175841.1 2618 2618 1 ENSG00000236786.1 TSPY15P chrY 9548108 9550681 + unprocessed_pseudogene KNOWN OTTHUMG00000041526.1 2574 923 6 ENSG00000231436.1 RBMY3AP chrY 9610571 9621276 - unprocessed_pseudogene KNOWN OTTHUMG00000041525.1 10706 1145 8 ENSG00000234110.1 TSPY25P chrY 9624183 9626352 + unprocessed_pseudogene KNOWN OTTHUMG00000041527.1 2170 745 5 ENSG00000226223.1 TSPY16P chrY 9640249 9640716 - unprocessed_pseudogene KNOWN OTTHUMG00000041593.1 468 468 1 ENSG00000232617.1 AC017019.1 chrY 9665229 9669010 + unprocessed_pseudogene KNOWN OTTHUMG00000041590.1 3782 261 2 ENSG00000183385.8 TTTY8 chrY 9691100 9693957 + lincRNA KNOWN OTTHUMG00000046237.1 2858 708 6 ENSG00000147761.7 TTTY7B chrY 9706824 9715262 - lincRNA KNOWN OTTHUMG00000046238.1 8439 1466 16 ENSG00000228890.1 TTTY21 chrY 9717653 9721296 - lincRNA KNOWN OTTHUMG00000046232.1 3644 307 2 ENSG00000212855.5 TTTY2 chrY 9740584 9758476 + lincRNA KNOWN OTTHUMG00000046230.1 17893 3168 7 ENSG00000129845.5 TTTY1 chrY 9753156 9774289 - lincRNA KNOWN OTTHUMG00000046226.1 21134 910 5 ENSG00000115808.10 STRN chr2 36843640 36966472 - protein_coding KNOWN OTTHUMG00000100959.2 122833 8345 43 ENSG00000224075.1 TTTY22 chrY 9801153 9813245 + lincRNA KNOWN OTTHUMG00000041601.1 12093 427 5 ENSG00000228379.1 AC010891.2 chrY 9813315 9817513 + lincRNA NOVEL OTTHUMG00000041597.1 4199 448 3 ENSG00000229208.1 RBMY2NP chrY 9831418 9846696 - unprocessed_pseudogene KNOWN OTTHUMG00000041598.1 15279 1028 7 ENSG00000274445.1 RP11-373F14.2 chrY 9868462 9868702 - processed_pseudogene KNOWN OTTHUMG00000188055.1 241 241 1 ENSG00000231874.3 TSPY18P chrY 9869664 9870781 + unprocessed_pseudogene KNOWN OTTHUMG00000041594.1 1118 509 2 ENSG00000187657.6 TSPY13P chrY 9905595 9908139 - unprocessed_pseudogene KNOWN OTTHUMG00000041595.1 2545 914 6 ENSG00000239225.1 TTTY23 chrY 9910798 9911962 + lincRNA KNOWN OTTHUMG00000046234.1 1165 512 3 ENSG00000234950.1 RBMY2OP chrY 9951553 9959423 + unprocessed_pseudogene KNOWN OTTHUMG00000041596.1 7871 810 6 ENSG00000236718.3 RBMY2QP chrY 10022489 10034187 - unprocessed_pseudogene KNOWN OTTHUMG00000041600.1 11699 1147 8 ENSG00000243643.1 TSPY20P chrY 10036195 10038375 + unprocessed_pseudogene KNOWN OTTHUMG00000041614.1 2181 630 4 ENSG00000252756.1 RNU6-577P chr2 36867398 36867495 - snRNA KNOWN NA 98 98 1 ENSG00000225685.1 TSPY5P chrY 10066554 10069151 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000041615.2 2598 973 8 ENSG00000278478.1 RP11-160K17.1 chrY 10070131 10070409 + processed_pseudogene KNOWN OTTHUMG00000188057.1 279 279 1 ENSG00000235193.1 AC006987.4 chrY 10088026 10089586 + unprocessed_pseudogene KNOWN OTTHUMG00000041616.1 1561 527 2 ENSG00000251766.1 RNA5SP518 chrY 10090410 10090528 - rRNA KNOWN NA 119 119 1 ENSG00000235691.1 AC006987.5 chrY 10090802 10091207 + unprocessed_pseudogene KNOWN OTTHUMG00000041617.1 406 406 1 ENSG00000252289.1 RNA5SP519 chrY 10092875 10092993 - rRNA KNOWN NA 119 119 1 ENSG00000226975.1 AC006987.6 chrY 10169788 10170314 - unprocessed_pseudogene KNOWN OTTHUMG00000041618.1 527 527 1 ENSG00000231411.1 AC006987.7 chrY 10171590 10172725 - unprocessed_pseudogene KNOWN OTTHUMG00000041619.1 1136 1136 1 ENSG00000226061.1 PCMTD1P1 chrY 10173853 10174207 + unprocessed_pseudogene KNOWN OTTHUMG00000041613.1 355 355 1 ENSG00000237447.1 CDC27P2 chrY 10190377 10192298 - processed_pseudogene KNOWN OTTHUMG00000036270.1 1922 1922 1 ENSG00000281381.1 U6 chr2 36959362 36959462 + snRNA NOVEL NA 101 101 1 ENSG00000251966.2 AC010970.1 chrY 10196372 10196484 + miRNA NOVEL NA 113 113 1 ENSG00000225840.2 AC010970.2 chrY 10197256 10199103 - processed_pseudogene KNOWN OTTHUMG00000036271.2 1848 1848 1 ENSG00000251705.1 RNA5-8SP6 chrY 10200155 10200306 + rRNA KNOWN NA 152 152 1 ENSG00000273858.1 RP1-85D24.4 chrY 11042722 11042943 - processed_pseudogene KNOWN OTTHUMG00000188059.1 222 222 1 ENSG00000273693.1 C2orf27AP1 chrY 11085476 11086061 - processed_pseudogene KNOWN OTTHUMG00000188061.1 586 586 1 ENSG00000271365.1 RP1-85D24.3 chrY 11107065 11107263 - processed_pseudogene KNOWN OTTHUMG00000185057.1 199 199 1 ENSG00000271309.1 RP1-85D24.2 chrY 11107389 11107596 - processed_pseudogene KNOWN OTTHUMG00000185058.1 208 208 1 ENSG00000270570.1 RP1-85D24.1 chrY 11107719 11107887 - processed_pseudogene KNOWN OTTHUMG00000185059.1 169 169 1 ENSG00000274231.1 RP11-131M6.1 chrY 11144250 11144492 + processed_pseudogene KNOWN OTTHUMG00000188062.1 243 243 1 ENSG00000278212.1 MAFIP chrY 11153858 11159013 - unprocessed_pseudogene KNOWN OTTHUMG00000188065.1 5156 1265 6 ENSG00000008869.10 HEATR5B chr2 36968383 37084342 - protein_coding KNOWN OTTHUMG00000152158.1 115960 8206 46 ENSG00000274502.1 RP11-131M6.3 chrY 11173618 11173821 + processed_pseudogene KNOWN OTTHUMG00000188066.1 204 204 1 ENSG00000274162.1 RP11-131M6.4 chrY 11178306 11178816 + processed_pseudogene KNOWN OTTHUMG00000188067.1 511 511 1 ENSG00000263502.1 AC134878.2 chrY 11184683 11184764 - miRNA NOVEL NA 82 82 1 ENSG00000252855.1 AC134878.1 chrY 11184875 11184957 - miRNA NOVEL NA 83 83 1 ENSG00000258567.1 DUX4L16 chrY 11306918 11308181 + unprocessed_pseudogene KNOWN OTTHUMG00000170710.1 1264 1264 1 ENSG00000273534.1 AC134882.1 chrY 11308274 11308351 + miRNA NOVEL NA 78 78 1 ENSG00000259154.1 DUX4L17 chrY 11314921 11316187 + unprocessed_pseudogene KNOWN OTTHUMG00000170711.1 1267 1267 1 ENSG00000276079.1 AC134882.2 chrY 11316278 11316360 + miRNA NOVEL NA 83 83 1 ENSG00000259029.1 DUX4L18 chrY 11321557 11322823 + unprocessed_pseudogene KNOWN OTTHUMG00000170712.1 1267 1267 1 ENSG00000258991.1 DUX4L19 chrY 11332329 11333595 + unprocessed_pseudogene KNOWN OTTHUMG00000170713.1 1267 1267 1 ENSG00000152133.13 GPATCH11 chr2 37084451 37099244 + protein_coding KNOWN OTTHUMG00000128469.3 14794 4040 20 ENSG00000277716.1 AC134882.3 chrY 11333688 11333771 + miRNA NOVEL NA 84 84 1 ENSG00000270455.1 PABPC1P5 chrY 11335627 11337693 + processed_pseudogene KNOWN OTTHUMG00000185074.1 2067 1676 2 ENSG00000183704.7 SLC9B1P1 chrY 11340579 11385687 - unprocessed_pseudogene KNOWN OTTHUMG00000187487.1 45109 1337 9 ENSG00000270242.1 ACTR3BP1 chrY 11395699 11397076 + processed_pseudogene KNOWN OTTHUMG00000185098.1 1378 1247 2 ENSG00000275828.1 RP11-295P22.3 chrY 11412548 11418716 + unprocessed_pseudogene KNOWN OTTHUMG00000188082.1 6169 254 3 ENSG00000225433.3 MTND1P12 chrY 11445418 11445564 - unprocessed_pseudogene KNOWN OTTHUMG00000188087.1 147 147 1 ENSG00000224567.2 RP11-295P22.4 chrY 11445708 11446101 - processed_pseudogene KNOWN OTTHUMG00000188088.1 394 394 1 ENSG00000271375.1 RP11-295P22.2 chrY 11473727 11474237 - processed_pseudogene KNOWN OTTHUMG00000185099.1 511 389 2 ENSG00000234385.1 RCC2P1 chrY 11781052 11782527 - processed_pseudogene KNOWN OTTHUMG00000036287.2 1476 1476 1 ENSG00000215583.3 ASS1P6 chrY 11922536 11923769 - processed_pseudogene KNOWN OTTHUMG00000036286.1 1234 1234 1 ENSG00000055332.15 EIF2AK2 chr2 37099210 37157065 - protein_coding KNOWN OTTHUMG00000100962.3 57856 10753 68 ENSG00000235649.2 MXRA5Y chrY 11957208 11987386 + unprocessed_pseudogene KNOWN OTTHUMG00000036377.2 30179 8000 4 ENSG00000236477.1 RPS24P1 chrY 12244752 12245457 + processed_pseudogene KNOWN OTTHUMG00000036383.1 706 371 2 ENSG00000232226.2 ARSFP1 chrY 12252321 12258033 - unprocessed_pseudogene KNOWN OTTHUMG00000036376.1 5713 477 3 ENSG00000243980.3 RN7SL702P chrY 12273473 12273764 + misc_RNA KNOWN NA 292 292 1 ENSG00000232730.1 FAM8A4P chrY 12321623 12322835 + processed_pseudogene KNOWN OTTHUMG00000036378.1 1213 1213 1 ENSG00000224060.3 ARSEP1 chrY 12339813 12347495 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000036379.2 7683 782 5 ENSG00000225117.1 ARSDP1 chrY 12354096 12387328 + unprocessed_pseudogene KNOWN OTTHUMG00000036380.1 33233 1215 8 ENSG00000206159.9 GYG2P1 chrY 12354416 12420456 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000036382.4 66041 2159 17 ENSG00000227447.1 XGY1 chrY 12440046 12507369 - unprocessed_pseudogene KNOWN OTTHUMG00000036465.1 67324 446 8 ENSG00000226863.1 SHROOM2P1 chrY 12537773 12544883 + unprocessed_pseudogene KNOWN OTTHUMG00000036466.1 7111 2384 3 ENSG00000227751.1 RP1-20B21.4 chr1 17406760 17407382 + antisense KNOWN OTTHUMG00000037449.1 623 311 2 ENSG00000224891.1 AC007899.3 chr2 37148530 37149304 + processed_pseudogene KNOWN OTTHUMG00000152157.1 775 775 1 ENSG00000233774.1 MED14P1 chrY 12618983 12634402 - unprocessed_pseudogene KNOWN OTTHUMG00000036467.1 15420 648 5 ENSG00000233864.6 TTTY15 chrY 12662334 12692233 + lincRNA KNOWN OTTHUMG00000036468.1 29900 5284 12 ENSG00000114374.11 USP9Y chrY 12701231 12860839 + protein_coding KNOWN OTTHUMG00000036469.2 159609 11237 100 ENSG00000228411.1 CDY4P chrY 12801973 12803830 - processed_pseudogene KNOWN OTTHUMG00000036471.1 1858 1513 2 ENSG00000067048.15 DDX3Y chrY 12904108 12920478 + protein_coding KNOWN OTTHUMG00000036324.2 16371 5738 66 ENSG00000234059.1 CASKP1 chrY 12930165 12948182 - unprocessed_pseudogene KNOWN OTTHUMG00000036325.1 18018 582 8 ENSG00000224035.1 SFPQP1 chrY 13083790 13095805 + processed_pseudogene KNOWN OTTHUMG00000036320.1 12016 1786 2 ENSG00000235462.1 TAB3P1 chrY 13153931 13162214 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000036321.2 8284 1831 5 ENSG00000223915.1 DPPA2P1 chrY 13230884 13231439 + processed_pseudogene KNOWN OTTHUMG00000036323.1 556 556 1 ENSG00000183878.14 UTY chrY 13248379 13480673 - protein_coding KNOWN OTTHUMG00000036319.2 232295 9191 353 ENSG00000138068.9 SULT6B1 chr2 37167820 37196598 - protein_coding KNOWN OTTHUMG00000152160.1 28779 1325 23 ENSG00000215414.4 PSMA6P1 chrY 13286638 13287378 + processed_pseudogene KNOWN OTTHUMG00000036322.1 741 741 1 ENSG00000252694.1 AC006371.1 chrY 13667960 13668056 - miRNA NOVEL NA 97 97 1 ENSG00000154620.5 TMSB4Y chrY 13703567 13706024 + protein_coding KNOWN OTTHUMG00000036366.1 2458 1669 2 ENSG00000241859.5 KALP chrY 13751656 13915824 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000036365.3 164169 2369 24 ENSG00000129864.6 VCY chrY 13985772 13986513 - protein_coding KNOWN OTTHUMG00000036401.1 742 550 2 ENSG00000129862.6 VCY1B chrY 14056217 14056958 + protein_coding KNOWN OTTHUMG00000036402.1 742 550 2 ENSG00000235451.1 PNPLA4P1 chrY 14081075 14086600 + unprocessed_pseudogene KNOWN OTTHUMG00000036403.1 5526 305 3 ENSG00000266220.1 AC010723.2 chrY 14252185 14252291 - miRNA NOVEL NA 107 107 1 ENSG00000223517.1 AC010723.1 chrY 14276212 14277489 - lincRNA NOVEL OTTHUMG00000036405.1 1278 540 2 ENSG00000165246.11 NLGN4Y chrY 14522638 14845650 + protein_coding KNOWN OTTHUMG00000036618.3 323013 8206 47 ENSG00000233159.1 AC007390.4 chr2 37194382 37194737 - processed_pseudogene KNOWN OTTHUMG00000152161.1 356 356 1 ENSG00000226555.1 AGKP1 chrY 14639096 14640358 + processed_pseudogene KNOWN OTTHUMG00000036620.1 1263 1263 1 ENSG00000228787.1 NLGN4Y-AS1 chrY 14793642 14804033 - antisense NOVEL OTTHUMG00000058879.1 10392 532 4 ENSG00000236131.1 MED13P1 chrY 14907898 14908068 + processed_pseudogene KNOWN OTTHUMG00000036619.1 171 171 1 ENSG00000227949.1 CYCSP46 chrY 14941547 14941750 - processed_pseudogene KNOWN OTTHUMG00000036621.1 204 204 1 ENSG00000224518.2 AC006989.2 chrY 14941746 14942715 + processed_pseudogene KNOWN OTTHUMG00000036617.2 970 131 2 ENSG00000234620.1 HDHD1P1 chrY 15348662 15456074 - unprocessed_pseudogene KNOWN OTTHUMG00000036408.1 107413 495 3 ENSG00000227166.1 STSP1 chrY 15547216 15593331 + unprocessed_pseudogene KNOWN OTTHUMG00000036409.1 46116 1151 5 ENSG00000281069.1 AC017020.2 chrY 15935949 15936020 + miRNA NOVEL NA 72 72 1 ENSG00000252664.1 AC017020.1 chrY 16062766 16062829 + miRNA NOVEL NA 64 64 1 ENSG00000252689.1 SNORA20 chrY 16138248 16138379 - snoRNA NOVEL NA 132 132 1 ENSG00000218739.8 CEBPZOS chr2 37196488 37216193 + protein_coding NOVEL OTTHUMG00000152162.4 19706 4698 34 ENSG00000252173.1 RNU6-109P chrY 16248935 16249041 + snRNA KNOWN NA 107 107 1 ENSG00000252323.1 RNU6-184P chrY 16336283 16336389 - snRNA KNOWN NA 107 107 1 ENSG00000228518.1 SURF6P1 chrY 17192826 17193652 + processed_pseudogene KNOWN OTTHUMG00000036417.1 827 827 1 ENSG00000271595.1 TCEB1P35 chrY 17464879 17465214 - processed_pseudogene KNOWN OTTHUMG00000185085.1 336 336 1 ENSG00000224989.2 FAM41AY1 chrY 17500958 17515018 + lincRNA KNOWN OTTHUMG00000041970.2 14061 906 7 ENSG00000228578.1 TUBB1P2 chrY 17516836 17519038 - unprocessed_pseudogene KNOWN OTTHUMG00000036414.1 2203 1306 4 ENSG00000230663.1 FAM224B chrY 17552800 17579754 - lincRNA NOVEL OTTHUMG00000036416.1 26955 2032 5 ENSG00000252315.1 RNA5SP520 chrY 17557864 17557976 + rRNA KNOWN NA 113 113 1 ENSG00000252012.1 RNA5SP521 chrY 17559774 17559889 + rRNA KNOWN NA 116 116 1 ENSG00000273966.1 pRNA chrY 17568962 17569051 - misc_RNA NOVEL NA 90 90 1 ENSG00000115816.12 CEBPZ chr2 37201612 37231713 - protein_coding KNOWN OTTHUMG00000100960.2 30102 3629 40 ENSG00000238191.3 CLUHP1 chrY 17621259 17625832 - unprocessed_pseudogene KNOWN OTTHUMG00000041625.1 4574 1190 10 ENSG00000252038.1 AC068704.1 chrY 17623061 17623155 - miRNA NOVEL NA 95 95 1 ENSG00000226353.1 TAF9P1 chrY 17628513 17629402 + processed_pseudogene KNOWN OTTHUMG00000041658.1 890 515 2 ENSG00000275578.1 RP11-357E16.1 chrY 17705968 17708185 - unprocessed_pseudogene KNOWN OTTHUMG00000188092.1 2218 398 2 ENSG00000226449.1 CDY5P chrY 17721598 17723177 + unprocessed_pseudogene KNOWN OTTHUMG00000041659.1 1580 1580 1 ENSG00000225896.1 AC007742.3 chrY 17726752 17727080 + processed_pseudogene KNOWN OTTHUMG00000041660.1 329 329 1 ENSG00000224166.1 PRYP1 chrY 17729528 17744596 - unprocessed_pseudogene KNOWN OTTHUMG00000041661.1 15069 445 3 ENSG00000229129.1 ACTG1P2 chrY 17757001 17758125 - processed_pseudogene KNOWN OTTHUMG00000041662.1 1125 1125 1 ENSG00000250868.4 XKRY chrY 17768980 17777400 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000041664.2 8421 1916 3 ENSG00000223555.1 USP9YP23 chrY 17782210 17784815 + unprocessed_pseudogene KNOWN OTTHUMG00000059528.1 2606 407 3 ENSG00000272054.1 RP11-423P10.2 chr2 37208875 37212677 + sense_intronic NOVEL OTTHUMG00000185598.1 3803 3803 1 ENSG00000235521.1 USP9YP27 chrY 17788315 17789484 - unprocessed_pseudogene KNOWN OTTHUMG00000059529.1 1170 438 4 ENSG00000252513.1 RNU1-128P chrY 17789003 17789162 - snRNA KNOWN NA 160 160 1 ENSG00000224964.1 TRAPPC2P3 chrY 17797983 17800696 - unprocessed_pseudogene KNOWN OTTHUMG00000041665.1 2714 321 3 ENSG00000226011.1 OFD1P1Y chrY 17809807 17825329 + unprocessed_pseudogene KNOWN OTTHUMG00000041650.1 15523 1225 11 ENSG00000225740.1 TCEB1P6 chrY 17837201 17837528 - processed_pseudogene KNOWN OTTHUMG00000041651.1 328 328 1 ENSG00000129873.6 CDY2B chrY 17877410 17880220 - protein_coding KNOWN OTTHUMG00000041652.1 2811 2402 4 ENSG00000229138.1 CDY6P chrY 17882099 17883708 - unprocessed_pseudogene KNOWN OTTHUMG00000041653.1 1610 1266 2 ENSG00000224485.1 USP9YP7 chrY 17908755 17910806 + unprocessed_pseudogene KNOWN OTTHUMG00000059524.1 2052 430 2 ENSG00000226116.1 USP9YP6 chrY 17912699 17921630 - unprocessed_pseudogene KNOWN OTTHUMG00000041654.1 8932 854 5 ENSG00000237558.1 CDY7P chrY 17951589 17953500 + unprocessed_pseudogene KNOWN OTTHUMG00000041655.1 1912 1604 2 ENSG00000003509.14 NDUFAF7 chr2 37231631 37253403 + protein_coding KNOWN OTTHUMG00000128468.5 21773 3651 85 ENSG00000233378.1 USP9YP34 chrY 17984349 17993260 + unprocessed_pseudogene KNOWN OTTHUMG00000041656.1 8912 808 5 ENSG00000237616.1 USP9YP32 chrY 17995201 17997252 - unprocessed_pseudogene KNOWN OTTHUMG00000059525.1 2052 430 2 ENSG00000224033.1 CDY8P chrY 18022299 18023908 + unprocessed_pseudogene KNOWN OTTHUMG00000041958.1 1610 1279 2 ENSG00000182415.9 CDY2A chrY 18025787 18028597 + protein_coding KNOWN OTTHUMG00000041657.1 2811 2402 4 ENSG00000230412.1 TCEB1P12 chrY 18068483 18068810 + processed_pseudogene KNOWN OTTHUMG00000041972.1 328 328 1 ENSG00000226611.2 OFD1P2Y chrY 18080681 18096202 - unprocessed_pseudogene KNOWN OTTHUMG00000041948.1 15522 1149 10 ENSG00000225895.1 TRAPPC2P8 chrY 18105314 18108102 + unprocessed_pseudogene KNOWN OTTHUMG00000041951.1 2789 396 3 ENSG00000233120.1 USP9YP15 chrY 18116527 18117695 + unprocessed_pseudogene KNOWN OTTHUMG00000059527.1 1169 422 4 ENSG00000252166.1 RNU1-95P chrY 18116848 18117007 + snRNA KNOWN NA 160 160 1 ENSG00000232744.1 USP9YP16 chrY 18121195 18123799 - unprocessed_pseudogene KNOWN OTTHUMG00000059526.1 2605 407 3 ENSG00000115825.8 PRKD3 chr2 37250502 37324808 - protein_coding KNOWN OTTHUMG00000100961.4 74307 10244 82 ENSG00000244646.4 XKRY2 chrY 18128610 18137029 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000041953.2 8420 1916 3 ENSG00000229465.1 ACTG1P11 chrY 18147884 18149008 + processed_pseudogene KNOWN OTTHUMG00000041957.1 1125 1125 1 ENSG00000231311.1 PRYP2 chrY 18161366 18176484 + unprocessed_pseudogene KNOWN OTTHUMG00000041960.1 15119 492 3 ENSG00000236599.1 TCEB1P26 chrY 18178932 18179260 - processed_pseudogene KNOWN OTTHUMG00000041962.1 329 329 1 ENSG00000232899.1 CDY9P chrY 18182835 18184414 - unprocessed_pseudogene KNOWN OTTHUMG00000041963.1 1580 1580 1 ENSG00000229302.1 TAF9P2 chrY 18276607 18277495 - processed_pseudogene KNOWN OTTHUMG00000041966.1 889 515 2 ENSG00000228945.3 CLUHP2 chrY 18280178 18284761 + unprocessed_pseudogene KNOWN OTTHUMG00000041967.1 4584 1303 9 ENSG00000252439.1 AC007241.1 chrY 18282853 18282947 + miRNA NOVEL NA 95 95 1 ENSG00000233522.1 FAM224A chrY 18326253 18353210 + lincRNA NOVEL OTTHUMG00000041969.1 26958 2031 5 ENSG00000278391.1 pRNA chrY 18336960 18337049 + misc_RNA NOVEL NA 90 90 1 ENSG00000232028.1 AC007391.2 chr2 37325340 37326797 + lincRNA NOVEL OTTHUMG00000152509.1 1458 504 2 ENSG00000251953.1 RNA5SP522 chrY 18346123 18346238 - rRNA KNOWN NA 116 116 1 ENSG00000252667.1 RNA5SP523 chrY 18348035 18348147 - rRNA KNOWN NA 113 113 1 ENSG00000249726.1 TUBB1P1 chrY 18386974 18389151 + unprocessed_pseudogene KNOWN OTTHUMG00000041971.1 2178 1300 4 ENSG00000226362.2 FAM41AY2 chrY 18390994 18405046 - lincRNA NOVEL OTTHUMG00000041973.2 14053 906 7 ENSG00000225716.1 TCEB1P13 chrY 18440797 18441125 + processed_pseudogene KNOWN OTTHUMG00000041974.1 329 329 1 ENSG00000229406.1 OFD1P4Y chrY 18453150 18472137 - unprocessed_pseudogene KNOWN OTTHUMG00000041975.1 18988 1179 11 ENSG00000227494.2 USP9YP14 chrY 18481087 18487400 + unprocessed_pseudogene KNOWN OTTHUMG00000041981.1 6314 563 4 ENSG00000252209.1 RNU1-48P chrY 18486511 18486672 + snRNA KNOWN NA 162 162 1 ENSG00000249634.1 USP9YP5 chrY 18490915 18494295 - unprocessed_pseudogene KNOWN OTTHUMG00000041983.1 3381 630 4 ENSG00000251510.1 AC022486.1 chrY 18491740 18547698 + lincRNA NOVEL OTTHUMG00000041976.1 55959 1483 5 ENSG00000207364.1 RNU6-939P chr2 37331770 37331876 - snRNA KNOWN NA 107 107 1 ENSG00000238067.1 XKRYP1 chrY 18508577 18509068 + unprocessed_pseudogene KNOWN OTTHUMG00000041984.1 492 492 1 ENSG00000233546.1 PRYP5 chrY 18529358 18529623 + unprocessed_pseudogene KNOWN OTTHUMG00000041977.1 266 266 1 ENSG00000230377.1 TCEB1P7 chrY 18532326 18532656 - processed_pseudogene KNOWN OTTHUMG00000041978.1 331 331 1 ENSG00000250951.1 USP9YP1 chrY 18540980 18544128 + unprocessed_pseudogene KNOWN OTTHUMG00000041979.1 3149 1002 3 ENSG00000172468.12 HSFY1 chrY 18546671 18588963 + protein_coding KNOWN OTTHUMG00000041980.2 42293 2906 13 ENSG00000230458.1 GPM6BP1 chrY 18578417 18578560 + unprocessed_pseudogene KNOWN OTTHUMG00000041985.1 144 144 1 ENSG00000131007.8 TTTY9B chrY 18581206 18590521 - antisense KNOWN OTTHUMG00000041950.3 9316 1643 9 ENSG00000240438.2 OFD1P5Y chrY 18582063 18629077 - unprocessed_pseudogene KNOWN OTTHUMG00000041982.2 47015 2590 16 ENSG00000235479.1 RAB9AP4 chrY 18649671 18650279 + unprocessed_pseudogene KNOWN OTTHUMG00000041986.1 609 609 1 ENSG00000249606.1 TRAPPC2P7 chrY 18655520 18656190 - unprocessed_pseudogene KNOWN OTTHUMG00000041987.1 671 231 2 ENSG00000266727.1 AC004824.1 chr1 17413631 17413694 - miRNA NOVEL NA 64 64 1 ENSG00000115828.14 QPCT chr2 37344574 37373322 + protein_coding KNOWN OTTHUMG00000100963.2 28749 2599 29 ENSG00000242153.6 OFD1P6Y chrY 18674033 18739197 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000041945.2 65165 4088 26 ENSG00000169953.11 HSFY2 chrY 18731440 18828662 - protein_coding KNOWN OTTHUMG00000041947.2 97223 4137 18 ENSG00000236429.1 GPM6BP2 chrY 18741843 18741986 - unprocessed_pseudogene KNOWN OTTHUMG00000041949.1 144 144 1 ENSG00000249501.1 USP9YP2 chrY 18776279 18779427 - unprocessed_pseudogene KNOWN OTTHUMG00000041954.1 3149 1000 3 ENSG00000228193.1 TCEB1P14 chrY 18787750 18788080 + processed_pseudogene KNOWN OTTHUMG00000041956.1 331 331 1 ENSG00000248573.1 PRYP6 chrY 18790709 18791051 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000041959.1 343 343 1 ENSG00000230904.1 XKRYP2 chrY 18811338 18811829 - unprocessed_pseudogene KNOWN OTTHUMG00000041961.1 492 492 1 ENSG00000238135.1 USP9YP10 chrY 18826107 18829487 + unprocessed_pseudogene KNOWN OTTHUMG00000041964.1 3381 628 4 ENSG00000224151.1 USP9YP28 chrY 18833002 18839313 - unprocessed_pseudogene KNOWN OTTHUMG00000041965.1 6312 589 5 ENSG00000251970.1 RNU1-41P chrY 18833729 18833890 - snRNA KNOWN NA 162 162 1 ENSG00000253078.1 RNU6-1116P chr2 37435510 37435608 - snRNA KNOWN NA 99 99 1 ENSG00000238088.1 OFD1P7Y chrY 18848264 18867280 + unprocessed_pseudogene KNOWN OTTHUMG00000036507.1 19017 1155 11 ENSG00000217179.1 MTCYBP2 chrY 18872102 18872272 + processed_pseudogene KNOWN OTTHUMG00000036510.1 171 171 1 ENSG00000176728.6 TTTY14 chrY 18872501 19077416 - lincRNA KNOWN OTTHUMG00000036505.2 204916 3239 20 ENSG00000217896.2 ZNF839P1 chrY 18985175 18986398 + processed_pseudogene KNOWN OTTHUMG00000036499.2 1224 861 2 ENSG00000185275.6 CD24P4 chrY 18992467 18992709 - processed_pseudogene KNOWN OTTHUMG00000036500.3 243 243 1 ENSG00000252766.1 RNU6-255P chrY 19018983 19019087 - snRNA KNOWN NA 105 105 1 ENSG00000274282.1 RP11-118E9.1 chrY 19253960 19260875 - processed_pseudogene KNOWN OTTHUMG00000188094.1 6916 842 2 ENSG00000234529.2 GAPDHP19 chrY 19327569 19328573 + processed_pseudogene KNOWN OTTHUMG00000036502.2 1005 1005 1 ENSG00000215580.9 BCORP1 chrY 19455431 19503153 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000036498.1 47723 7069 30 ENSG00000131002.10 TXLNGY chrY 19567313 19606274 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000036509.2 38962 11377 58 ENSG00000236213.1 AC006369.2 chr2 37600136 37646698 + antisense NOVEL OTTHUMG00000152557.1 46563 548 5 ENSG00000279335.1 AC009977.1 chrY 19576009 19576182 - protein_coding KNOWN NA 174 99 2 ENSG00000267793.1 RP11-576C2.1 chrY 19598188 19598757 + transcribed_processed_pseudogene KNOWN OTTHUMG00000179847.1 570 570 1 ENSG00000260197.1 RP11-424G14.1 chrY 19691941 19694606 - lincRNA NOVEL OTTHUMG00000175431.1 2666 2666 1 ENSG00000012817.14 KDM5D chrY 19703865 19744939 - protein_coding KNOWN OTTHUMG00000036508.2 41075 9463 154 ENSG00000274837.1 RP11-356K22.1 chrY 19932130 19932500 - processed_pseudogene KNOWN OTTHUMG00000188097.1 371 371 1 ENSG00000237997.1 RCC2P2 chrY 19986575 19987852 - processed_pseudogene KNOWN OTTHUMG00000036504.1 1278 918 2 ENSG00000232522.1 ZNF886P chrY 20001185 20012204 - unprocessed_pseudogene KNOWN OTTHUMG00000036506.1 11020 723 3 ENSG00000228764.1 ZNF885P chrY 20390051 20396796 + processed_pseudogene KNOWN OTTHUMG00000036665.1 6746 1098 3 ENSG00000229236.1 TTTY10 chrY 20465668 20519228 - lincRNA KNOWN OTTHUMG00000036431.2 53561 1726 8 ENSG00000277438.1 RP11-256K9.1 chrY 20570222 20570519 - processed_pseudogene KNOWN OTTHUMG00000188101.1 298 298 1 ENSG00000163171.7 CDC42EP3 chr2 37641882 37738468 - protein_coding KNOWN OTTHUMG00000100971.4 96587 10406 14 ENSG00000198692.8 EIF1AY chrY 20575725 20593154 + protein_coding KNOWN OTTHUMG00000036544.1 17430 4074 23 ENSG00000225624.1 TBL1YP1 chrY 20727254 20742900 + unprocessed_pseudogene KNOWN OTTHUMG00000036543.1 15647 1026 9 ENSG00000280969.1 RPS4Y2 chrY 20756164 20781032 + protein_coding KNOWN OTTHUMG00000036540.1 24869 792 7 ENSG00000224482.1 HSFY4P chrY 20808776 20811809 - unprocessed_pseudogene KNOWN OTTHUMG00000036537.1 3034 1181 2 ENSG00000216844.1 AC009494.3 chrY 20843256 20843710 - processed_pseudogene KNOWN OTTHUMG00000036545.1 455 455 1 ENSG00000229551.2 GAPDHP17 chrY 20861337 20862337 + processed_pseudogene KNOWN OTTHUMG00000036538.2 1001 1001 1 ENSG00000226504.1 TMEM167AP1 chrY 20907344 20907562 - processed_pseudogene KNOWN OTTHUMG00000036541.1 219 219 1 ENSG00000254488.1 RP11-65G9.1 chrY 21038289 21044724 - lincRNA NOVEL OTTHUMG00000165821.1 6436 983 3 ENSG00000237427.1 TOMM22P1 chrY 21130870 21131181 + processed_pseudogene KNOWN OTTHUMG00000036539.1 312 312 1 ENSG00000232634.1 NEFLP1 chrY 21221106 21222089 - processed_pseudogene KNOWN OTTHUMG00000036542.1 984 984 1 ENSG00000236572.1 AC006369.3 chr2 37744333 37747046 + lincRNA NOVEL OTTHUMG00000152558.2 2714 384 2 ENSG00000226918.1 AC010086.1 chrY 21311268 21318895 + unprocessed_pseudogene KNOWN OTTHUMG00000042035.1 7628 1052 9 ENSG00000216102.2 AC010086.2 chrY 21370918 21371003 - miRNA NOVEL NA 86 86 1 ENSG00000183146.4 PRORY chrY 21382954 21386360 - protein_coding KNOWN OTTHUMG00000042036.1 3407 878 4 ENSG00000223637.6 RBMY2EP chrY 21394991 21401585 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000042038.2 6595 940 12 ENSG00000236615.1 AC010086.5 chrY 21405770 21405995 + unprocessed_pseudogene KNOWN OTTHUMG00000042039.1 226 226 1 ENSG00000237269.1 RBMY2TP chrY 21430697 21437245 - unprocessed_pseudogene KNOWN OTTHUMG00000042040.1 6549 947 6 ENSG00000235719.3 AC010141.1 chrY 21465384 21467163 - unprocessed_pseudogene KNOWN OTTHUMG00000042041.1 1780 520 3 ENSG00000169849.8 TSPY14P chrY 21468158 21470683 + unprocessed_pseudogene KNOWN OTTHUMG00000042042.1 2526 915 6 ENSG00000169811.8 RBMY1HP chrY 21493519 21501968 + unprocessed_pseudogene KNOWN OTTHUMG00000042043.1 8450 1389 10 ENSG00000242393.1 AC010141.4 chrY 21508299 21510470 - unprocessed_pseudogene KNOWN OTTHUMG00000042044.1 2172 717 5 ENSG00000225402.1 AC010878.3 chr2 37816915 37817961 + processed_pseudogene KNOWN OTTHUMG00000152556.1 1047 1047 1 ENSG00000242875.5 RBMY1B chrY 21511338 21549094 + protein_coding KNOWN OTTHUMG00000042045.3 37757 2266 34 ENSG00000234414.6 RBMY1A1 chrY 21511372 21549326 + protein_coding KNOWN OTTHUMG00000043592.3 37955 2252 46 ENSG00000228257.1 AC010141.6 chrY 21531839 21534011 - unprocessed_pseudogene KNOWN OTTHUMG00000043590.1 2173 721 5 ENSG00000227989.1 AC010141.8 chrY 21555852 21558070 - unprocessed_pseudogene KNOWN OTTHUMG00000043595.1 2219 623 4 ENSG00000184991.2 TTTY13 chrY 21583600 21594666 - lincRNA KNOWN OTTHUMG00000043583.1 11067 659 6 ENSG00000271123.1 TCEB1P5 chrY 21631683 21632015 - processed_pseudogene KNOWN OTTHUMG00000185064.1 333 333 1 ENSG00000226042.1 CDY10P chrY 21637475 21639041 - unprocessed_pseudogene KNOWN OTTHUMG00000043576.1 1567 1567 1 ENSG00000237023.1 USP9YP3 chrY 21661926 21674008 + unprocessed_pseudogene KNOWN OTTHUMG00000043577.1 12083 1766 6 ENSG00000229416.1 USP9YP8 chrY 21677246 21681118 - unprocessed_pseudogene KNOWN OTTHUMG00000043579.1 3873 500 3 ENSG00000230029.1 CDY11P chrY 21696570 21698220 + unprocessed_pseudogene KNOWN OTTHUMG00000043581.1 1651 1651 1 ENSG00000237803.4 LINC00211 chr2 37826247 37876274 - lincRNA KNOWN OTTHUMG00000152169.2 50028 2595 10 ENSG00000277519.1 OFD1P16Y chrY 21817579 21818218 - unprocessed_pseudogene KNOWN OTTHUMG00000188103.1 640 318 2 ENSG00000229725.1 AC007322.1 chrY 21871331 21873550 + unprocessed_pseudogene KNOWN OTTHUMG00000043597.1 2220 605 3 ENSG00000242389.6 RBMY1E chrY 21880076 21918067 - protein_coding KNOWN OTTHUMG00000043602.2 37992 2498 46 ENSG00000244395.5 RBMY1D chrY 21880076 21894526 - protein_coding KNOWN OTTHUMG00000043598.2 14451 1921 34 ENSG00000251618.1 AC007322.3 chrY 21895394 21897559 + unprocessed_pseudogene KNOWN OTTHUMG00000043600.1 2166 723 5 ENSG00000227444.1 AC007322.5 chrY 21918935 21921106 + unprocessed_pseudogene KNOWN OTTHUMG00000043604.1 2172 750 5 ENSG00000226092.4 RBMY2AP chrY 21927521 21937150 - unprocessed_pseudogene KNOWN OTTHUMG00000043606.1 9630 1157 8 ENSG00000237968.1 AC007322.7 chrY 21940012 21941593 + unprocessed_pseudogene KNOWN OTTHUMG00000043607.1 1582 701 5 ENSG00000231159.1 OFD1P8Y chrY 21972313 22005349 + unprocessed_pseudogene KNOWN OTTHUMG00000043575.1 33037 1433 9 ENSG00000232475.1 HSFY5P chrY 22048554 22049347 - unprocessed_pseudogene KNOWN OTTHUMG00000043599.1 794 309 2 ENSG00000115841.18 RMDN2 chr2 37923187 38067142 + protein_coding KNOWN OTTHUMG00000128487.8 143956 5999 92 ENSG00000229553.1 USP9YP17 chrY 22049755 22058113 - unprocessed_pseudogene KNOWN OTTHUMG00000043601.1 8359 696 5 ENSG00000228850.1 CDY12P chrY 22064698 22065712 + unprocessed_pseudogene KNOWN OTTHUMG00000043603.1 1015 1015 1 ENSG00000232029.1 TCEB1P15 chrY 22068820 22069151 + processed_pseudogene KNOWN OTTHUMG00000043605.2 332 332 1 ENSG00000169807.9 PRY2 chrY 22071756 22096007 - protein_coding KNOWN OTTHUMG00000043586.2 24252 1353 11 ENSG00000236951.4 AC007359.6 chrY 22100814 22147484 - lincRNA NOVEL OTTHUMG00000043574.1 46671 3181 17 ENSG00000131548.7 TTTY6B chrY 22144966 22146831 + antisense KNOWN OTTHUMG00000043580.1 1866 491 3 ENSG00000169800.12 RBMY1F chrY 22168542 22182982 - protein_coding KNOWN OTTHUMG00000043593.1 14441 1921 34 ENSG00000229159.1 TSPY23P chrY 22183850 22186021 + unprocessed_pseudogene KNOWN OTTHUMG00000043596.1 2172 739 5 ENSG00000225615.1 RBMY2UP chrY 22198429 22203712 + unprocessed_pseudogene KNOWN OTTHUMG00000043584.1 5284 324 3 ENSG00000229234.1 RBMY1KP chrY 22209331 22216580 + unprocessed_pseudogene KNOWN OTTHUMG00000043585.1 7250 476 4 ENSG00000235848.3 RMDN2-AS1 chr2 37949911 38067041 - antisense NOVEL OTTHUMG00000152578.4 117131 3282 46 ENSG00000215560.2 TTTY5 chrY 22296798 22298876 - lincRNA KNOWN OTTHUMG00000043578.1 2079 1562 2 ENSG00000229940.1 TSPY22P chrY 22305925 22307951 - unprocessed_pseudogene KNOWN OTTHUMG00000043587.1 2027 604 3 ENSG00000226941.6 RBMY1J chrY 22308823 22417881 + protein_coding KNOWN OTTHUMG00000043594.2 109059 2043 46 ENSG00000243040.5 RBMY2FP chrY 22308859 22321825 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000043589.1 12967 2914 13 ENSG00000259247.1 TTTY25P chrY 22330452 22332500 + unprocessed_pseudogene KNOWN OTTHUMG00000172609.1 2049 1505 2 ENSG00000237902.1 TSPY21P chrY 22400403 22402568 - unprocessed_pseudogene KNOWN OTTHUMG00000043591.1 2166 731 5 ENSG00000235059.4 AC008175.1 chrY 22438940 22485592 + lincRNA NOVEL OTTHUMG00000043582.3 46653 3181 17 ENSG00000131538.7 TTTY6 chrY 22439593 22441458 - lincRNA KNOWN OTTHUMG00000046220.1 1866 491 3 ENSG00000169789.9 PRY chrY 22490397 22514637 + protein_coding KNOWN OTTHUMG00000043845.3 24241 1353 11 ENSG00000234131.1 TCEB1P8 chrY 22517242 22517573 - processed_pseudogene KNOWN OTTHUMG00000043847.1 332 332 1 ENSG00000138061.10 CYP1B1 chr2 38066973 38109902 - protein_coding KNOWN OTTHUMG00000100970.7 42930 6014 18 ENSG00000224873.1 CDY13P chrY 22520681 22521695 - unprocessed_pseudogene KNOWN OTTHUMG00000043848.1 1015 1015 1 ENSG00000230814.1 USP9YP24 chrY 22528281 22536639 + unprocessed_pseudogene KNOWN OTTHUMG00000043849.1 8359 697 5 ENSG00000228571.1 HSFY7P chrY 22537047 22537849 + unprocessed_pseudogene KNOWN OTTHUMG00000043851.1 803 318 2 ENSG00000230476.1 OFD1P9Y chrY 22580989 22614081 - unprocessed_pseudogene KNOWN OTTHUMG00000043852.1 33093 1491 9 ENSG00000273589.1 RP11-427G18.1 chrY 22646031 22646327 - unprocessed_pseudogene KNOWN OTTHUMG00000188100.1 297 297 1 ENSG00000224657.8 RBMY2BP chrY 22649245 22658878 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000043855.2 9634 1156 12 ENSG00000224917.1 AC016694.2 chrY 22670616 22672859 - unprocessed_pseudogene KNOWN OTTHUMG00000043856.1 2244 700 5 ENSG00000230727.1 RBMY2WP chrY 22762851 22769787 - unprocessed_pseudogene KNOWN OTTHUMG00000043850.1 6937 894 6 ENSG00000228240.1 TTTY17A chrY 22851584 22852715 + lincRNA KNOWN OTTHUMG00000043854.1 1132 166 2 ENSG00000276829.1 RP11-473E1.1 chrY 22861112 22861834 - unprocessed_pseudogene KNOWN OTTHUMG00000188104.1 723 452 2 ENSG00000074964.15 ARHGEF10L chr1 17539835 17697874 + protein_coding KNOWN OTTHUMG00000002514.3 158040 7817 124 ENSG00000232973.10 CYP1B1-AS1 chr2 38073447 38231651 + antisense KNOWN OTTHUMG00000128569.13 158205 7447 126 ENSG00000215537.3 ZNF736P11Y chrY 22866544 22867756 - processed_pseudogene KNOWN OTTHUMG00000043857.1 1213 1213 1 ENSG00000226906.1 TTTY4 chrY 22936455 22973284 + lincRNA NOVEL OTTHUMG00000045294.1 36830 1346 4 ENSG00000183753.8 BPY2 chrY 22973819 23005465 + protein_coding KNOWN OTTHUMG00000058899.4 31647 1525 24 ENSG00000244000.1 AC006366.3 chrY 23017063 23017821 + processed_pseudogene KNOWN OTTHUMG00000043858.1 759 759 1 ENSG00000232764.1 TRIM60P8Y chrY 23025594 23026663 + processed_pseudogene KNOWN OTTHUMG00000043859.1 1070 762 2 ENSG00000233126.3 ZNF736P3Y chrY 23049247 23051195 + processed_pseudogene KNOWN OTTHUMG00000044062.1 1949 1465 3 ENSG00000227251.1 TRIM60P9Y chrY 23058030 23059186 + processed_pseudogene KNOWN OTTHUMG00000044063.1 1157 816 2 ENSG00000188120.13 DAZ1 chrY 23129355 23199094 - protein_coding KNOWN OTTHUMG00000044053.1 69740 4787 108 ENSG00000205944.10 DAZ2 chrY 23219434 23291356 + protein_coding KNOWN OTTHUMG00000044060.2 71923 4164 195 ENSG00000205936.3 PPP1R12BP2 chrY 23379484 23392697 + unprocessed_pseudogene KNOWN OTTHUMG00000044061.1 13214 639 5 ENSG00000280276.1 RP11-314C9.1 chr2 38121935 38123881 - TEC KNOWN OTTHUMG00000185594.1 1947 1947 1 ENSG00000251925.1 SNORA70 chrY 23423099 23423236 - snoRNA NOVEL NA 138 138 1 ENSG00000225189.1 REREP1Y chrY 23462465 23472280 + unprocessed_pseudogene KNOWN OTTHUMG00000044055.1 9816 198 2 ENSG00000230073.1 AC009947.2 chrY 23523321 23525369 + unprocessed_pseudogene KNOWN OTTHUMG00000044056.1 2049 727 4 ENSG00000215540.9 RBMY2CP chrY 23537308 23546942 - transcribed_processed_pseudogene KNOWN OTTHUMG00000044057.2 9635 1157 12 ENSG00000236647.1 AC009947.5 chrY 23549809 23551385 + unprocessed_pseudogene KNOWN OTTHUMG00000044059.1 1577 672 5 ENSG00000225466.1 OFD1P10Y chrY 23581595 23614640 + unprocessed_pseudogene KNOWN OTTHUMG00000044054.1 33046 1433 9 ENSG00000224169.1 HSFY6P chrY 23657839 23659058 - unprocessed_pseudogene KNOWN OTTHUMG00000044993.1 1220 403 3 ENSG00000223407.1 USP9YP18 chrY 23659466 23667822 - unprocessed_pseudogene KNOWN OTTHUMG00000044994.1 8357 695 5 ENSG00000226873.1 CDY14P chrY 23674379 23675392 + unprocessed_pseudogene KNOWN OTTHUMG00000044995.1 1014 1014 1 ENSG00000227915.1 TCEB1P16 chrY 23678504 23678835 + unprocessed_pseudogene KNOWN OTTHUMG00000044996.1 332 332 1 ENSG00000229160.1 AC009229.6 chr2 38132637 38138946 - lincRNA NOVEL OTTHUMG00000152559.1 6310 351 3 ENSG00000169763.13 PRYP3 chrY 23681440 23694579 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000044998.2 13140 1063 6 ENSG00000236620.1 XKRYP3 chrY 23715922 23726808 - unprocessed_pseudogene KNOWN OTTHUMG00000044981.1 10887 1116 2 ENSG00000224866.1 USP9YP25 chrY 23734193 23736249 + unprocessed_pseudogene KNOWN OTTHUMG00000044983.1 2057 443 2 ENSG00000232424.1 USP9YP29 chrY 23740258 23746693 - unprocessed_pseudogene KNOWN OTTHUMG00000044984.1 6436 563 5 ENSG00000252681.1 RNU1-97P chrY 23740942 23741105 - snRNA KNOWN NA 164 164 1 ENSG00000232910.1 RAB9AP1 chrY 23751188 23751760 + unprocessed_pseudogene KNOWN OTTHUMG00000044985.1 573 573 1 ENSG00000232845.1 TRAPPC2P9 chrY 23762838 23765583 - unprocessed_pseudogene KNOWN OTTHUMG00000044986.1 2746 343 3 ENSG00000237302.1 OFD1P11Y chrY 23771232 23798150 + unprocessed_pseudogene KNOWN OTTHUMG00000044987.1 26919 1177 11 ENSG00000231540.1 TCEB1P9 chrY 23808821 23809059 - processed_pseudogene KNOWN OTTHUMG00000044997.1 239 239 1 ENSG00000223362.1 CDY15P chrY 23855522 23857091 - unprocessed_pseudogene KNOWN OTTHUMG00000044980.1 1570 1570 1 ENSG00000199603.1 RNU6-951P chr2 38147415 38147521 + snRNA KNOWN NA 107 107 1 ENSG00000231026.1 XKRYP4 chrY 23917241 23917723 - unprocessed_pseudogene KNOWN OTTHUMG00000044982.1 483 483 1 ENSG00000224571.1 USP9YP13 chrY 23919905 23921510 + unprocessed_pseudogene KNOWN OTTHUMG00000044988.1 1606 480 2 ENSG00000226369.1 USP9YP11 chrY 23934953 23940101 + unprocessed_pseudogene KNOWN OTTHUMG00000044989.1 5149 717 4 ENSG00000280961.1 TTTY3B chrY 23936727 23941622 - lincRNA KNOWN OTTHUMG00000189591.1 4896 344 3 ENSG00000227871.1 USP9YP12 chrY 23945927 23952293 - unprocessed_pseudogene KNOWN OTTHUMG00000044990.1 6367 570 4 ENSG00000251917.1 RNU1-86P chrY 23946618 23946771 - snRNA KNOWN NA 154 154 1 ENSG00000231423.1 RAB9AP5 chrY 23956569 23960218 + unprocessed_pseudogene KNOWN OTTHUMG00000044991.1 3650 597 2 ENSG00000228465.1 TRAPPC2P10 chrY 23967564 23970694 - unprocessed_pseudogene KNOWN OTTHUMG00000044992.2 3131 323 3 ENSG00000232585.1 OFD1P12Y chrY 23972780 23995081 + unprocessed_pseudogene KNOWN OTTHUMG00000045044.1 22302 1207 11 ENSG00000234081.1 TCEB1P10 chrY 24006911 24007237 - processed_pseudogene KNOWN OTTHUMG00000045045.1 327 327 1 ENSG00000273006.1 RP11-314C9.2 chr2 38193348 38193629 + lincRNA NOVEL OTTHUMG00000185850.1 282 282 1 ENSG00000172352.5 CDY1B chrY 24045229 24048019 - protein_coding KNOWN OTTHUMG00000045037.1 2791 2675 3 ENSG00000231375.1 CDY17P chrY 24049878 24051487 - unprocessed_pseudogene KNOWN OTTHUMG00000045046.1 1610 1282 2 ENSG00000237467.1 USP9YP35 chrY 24077799 24079812 + unprocessed_pseudogene KNOWN OTTHUMG00000045038.1 2014 412 2 ENSG00000229250.1 USP9YP31 chrY 24081704 24090346 - unprocessed_pseudogene KNOWN OTTHUMG00000045039.1 8643 881 5 ENSG00000232205.1 CDY18P chrY 24104107 24106018 + unprocessed_pseudogene KNOWN OTTHUMG00000045040.1 1912 1609 2 ENSG00000235981.2 AC023274.4 chrY 24142358 24157843 + unprocessed_pseudogene KNOWN OTTHUMG00000045041.1 15486 521 6 ENSG00000223698.3 GOLGA6L11P chrY 24168187 24174494 + unprocessed_pseudogene KNOWN OTTHUMG00000045042.2 6308 1298 9 ENSG00000278844.1 AC023274.1 chrY 24172086 24172151 + miRNA NOVEL NA 66 66 1 ENSG00000242854.1 DNM1P24 chrY 24179316 24183505 - unprocessed_pseudogene KNOWN OTTHUMG00000045078.1 4190 490 3 ENSG00000230977.1 AC023274.6 chrY 24182477 24183071 + unprocessed_pseudogene KNOWN OTTHUMG00000045043.1 595 595 1 ENSG00000227292.1 AC009229.5 chr2 38203363 38239590 - lincRNA NOVEL OTTHUMG00000152269.2 36228 622 2 ENSG00000244231.1 CSPG4P2Y chrY 24183434 24187231 - processed_transcript KNOWN OTTHUMG00000045073.1 3798 795 2 ENSG00000172342.5 CSPG4P3Y chrY 24186509 24191870 - unprocessed_pseudogene KNOWN OTTHUMG00000045077.1 5362 3724 2 ENSG00000279287.1 AC012005.4 chrY 24196425 24206144 - protein_coding KNOWN NA 9720 501 4 ENSG00000239533.5 GOLGA2P2Y chrY 24209567 24215581 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000045074.2 6015 1506 22 ENSG00000278686.1 AC012005.2 chrY 24210050 24210132 - miRNA NOVEL NA 83 83 1 ENSG00000274234.1 Metazoa_SRP chrY 24210958 24211216 - misc_RNA NOVEL NA 259 259 1 ENSG00000277197.1 AC012005.1 chrY 24213354 24213419 - miRNA NOVEL NA 66 66 1 ENSG00000225491.1 UBE2Q2P4Y chrY 24232826 24238984 - unprocessed_pseudogene KNOWN OTTHUMG00000045075.1 6159 207 2 ENSG00000224827.1 LINC00265-2P chrY 24276245 24277026 + processed_pseudogene KNOWN OTTHUMG00000045102.1 782 782 1 ENSG00000233740.1 CICP2 chrY 24278337 24281140 - processed_pseudogene KNOWN OTTHUMG00000045105.1 2804 2328 3 ENSG00000227770.1 RPL7P12 chr2 38231568 38232317 + processed_pseudogene KNOWN OTTHUMG00000152270.2 750 750 1 ENSG00000248792.1 LINC00266-2P chrY 24278681 24291346 + unprocessed_pseudogene KNOWN OTTHUMG00000045104.1 12666 454 3 ENSG00000279274.1 AC012005.3 chrY 24362031 24362436 - protein_coding KNOWN NA 406 406 1 ENSG00000234399.1 RBMY2XP chrY 24396604 24403526 - unprocessed_pseudogene KNOWN OTTHUMG00000045103.1 6923 895 6 ENSG00000227439.1 TTTY17B chrY 24485332 24486463 + lincRNA NOVEL OTTHUMG00000046228.1 1132 166 2 ENSG00000224210.1 TRIM60P5Y chrY 24494709 24495583 - processed_pseudogene KNOWN OTTHUMG00000045106.1 875 574 2 ENSG00000232003.2 ZNF736P12Y chrY 24500263 24501505 - processed_pseudogene KNOWN OTTHUMG00000045107.1 1243 1243 1 ENSG00000235412.1 TTTY4B chrY 24570202 24607025 + lincRNA NOVEL OTTHUMG00000045296.1 36824 1346 4 ENSG00000183795.7 BPY2B chrY 24607560 24639207 + protein_coding KNOWN OTTHUMG00000045101.2 31648 1436 26 ENSG00000240566.1 AC010153.3 chrY 24650808 24651534 + processed_pseudogene KNOWN OTTHUMG00000045108.2 727 727 1 ENSG00000232976.1 TRIM60P10Y chrY 24659337 24660406 + processed_pseudogene KNOWN OTTHUMG00000045111.1 1070 751 2 ENSG00000213594.4 GAPDHP25 chr2 38285410 38286410 + processed_pseudogene KNOWN OTTHUMG00000152298.3 1001 1001 1 ENSG00000226270.3 ZNF736P2Y chrY 24683657 24684935 + processed_pseudogene KNOWN OTTHUMG00000045110.1 1279 1279 1 ENSG00000227837.1 TRIM60P11Y chrY 24691791 24692932 + processed_pseudogene KNOWN OTTHUMG00000045204.1 1142 801 2 ENSG00000187191.13 DAZ3 chrY 24763069 24813492 - protein_coding KNOWN OTTHUMG00000045099.2 50424 3516 52 ENSG00000205916.9 DAZ4 chrY 24833820 24907040 + protein_coding KNOWN OTTHUMG00000045100.6 73221 4371 128 ENSG00000278602.1 RP11-539D10.1 chrY 24977176 24978317 - unprocessed_pseudogene KNOWN OTTHUMG00000188109.1 1142 791 2 ENSG00000223978.1 ZNF736P1Y chrY 24985201 24986476 - processed_pseudogene KNOWN OTTHUMG00000045205.1 1276 1276 1 ENSG00000278197.1 RP11-539D10.2 chrY 25009700 25010769 - unprocessed_pseudogene KNOWN OTTHUMG00000188110.1 1070 749 2 ENSG00000230819.1 ZNF736P5Y chrY 25018499 25019303 - processed_pseudogene KNOWN OTTHUMG00000045198.1 805 805 1 ENSG00000185894.7 BPY2C chrY 25030901 25062548 - protein_coding KNOWN OTTHUMG00000045199.2 31648 1436 26 ENSG00000228296.1 TTTY4C chrY 25063083 25099892 - lincRNA KNOWN OTTHUMG00000045200.1 36810 1346 4 ENSG00000119787.12 ATL2 chr2 38294880 38377285 - protein_coding KNOWN OTTHUMG00000102074.7 82406 4885 127 ENSG00000236379.2 ZNF736P4Y chrY 25168599 25169841 + processed_pseudogene KNOWN OTTHUMG00000045206.1 1243 1243 1 ENSG00000274899.1 RP11-566H16.1 chrY 25174520 25175237 + processed_pseudogene KNOWN OTTHUMG00000188105.1 718 415 2 ENSG00000223641.1 TTTY17C chrY 25183643 25184773 - lincRNA NOVEL OTTHUMG00000045207.1 1131 166 2 ENSG00000227633.1 RBMY2YP chrY 25266584 25273531 + unprocessed_pseudogene KNOWN OTTHUMG00000045208.1 6948 912 6 ENSG00000279115.1 AC006386.1 chrY 25307702 25308107 + protein_coding KNOWN NA 406 406 1 ENSG00000228786.4 LINC00266-4P chrY 25378300 25394719 - lincRNA NOVEL OTTHUMG00000045201.1 16420 1192 7 ENSG00000233652.1 CICP1 chrY 25388992 25391811 + processed_pseudogene KNOWN OTTHUMG00000045203.1 2820 2410 2 ENSG00000233944.1 LINC00265-3P chrY 25393154 25394056 - processed_pseudogene KNOWN OTTHUMG00000045202.1 903 903 1 ENSG00000223636.1 UBE2Q2P5Y chrY 25431156 25437315 + unprocessed_pseudogene KNOWN OTTHUMG00000045280.1 6160 207 2 ENSG00000172297.7 GOLGA2P3Y chrY 25454561 25460572 + unprocessed_pseudogene KNOWN OTTHUMG00000045281.1 6012 1653 14 ENSG00000231367.4 AC016995.3 chr2 38406719 38515740 - lincRNA NOVEL OTTHUMG00000153431.1 109022 1768 15 ENSG00000278258.1 AC006328.3 chrY 25456723 25456788 + miRNA NOVEL NA 66 66 1 ENSG00000278242.1 Metazoa_SRP chrY 25458926 25459184 + misc_RNA NOVEL NA 259 259 1 ENSG00000252471.1 AC006328.1 chrY 25460010 25460092 + miRNA NOVEL NA 83 83 1 ENSG00000280301.1 AC006328.4 chrY 25463994 25473714 + protein_coding KNOWN NA 9721 501 4 ENSG00000172294.7 CSPG4P4Y chrY 25478269 25483630 + unprocessed_pseudogene KNOWN OTTHUMG00000045284.1 5362 3724 2 ENSG00000240450.1 CSPG4P1Y chrY 25482908 25486705 + lincRNA NOVEL OTTHUMG00000045282.1 3798 795 2 ENSG00000239304.1 DNM1P48 chrY 25486640 25487322 + processed_pseudogene KNOWN OTTHUMG00000045285.1 683 439 2 ENSG00000233619.1 AC006328.9 chrY 25487284 25487662 - processed_pseudogene KNOWN OTTHUMG00000045286.1 379 379 1 ENSG00000197092.5 GOLGA6L16P chrY 25495651 25501958 - unprocessed_pseudogene KNOWN OTTHUMG00000045260.1 6308 1299 9 ENSG00000273504.1 AC006328.2 chrY 25497994 25498059 - miRNA NOVEL NA 66 66 1 ENSG00000236648.1 RP11-473A10.2 chr1 17717687 17749978 + lincRNA NOVEL OTTHUMG00000002515.1 32292 610 4 ENSG00000235009.1 AC093822.1 chr2 38431294 38433573 + lincRNA NOVEL OTTHUMG00000153433.1 2280 380 2 ENSG00000235583.2 AC007562.1 chrY 25512301 25527786 - unprocessed_pseudogene KNOWN OTTHUMG00000045264.1 15486 517 6 ENSG00000237823.1 CDY19P chrY 25564122 25566033 - unprocessed_pseudogene KNOWN OTTHUMG00000045266.1 1912 1613 2 ENSG00000229709.1 USP9YP36 chrY 25579790 25588444 + unprocessed_pseudogene KNOWN OTTHUMG00000045268.1 8655 829 5 ENSG00000232064.1 USP9YP33 chrY 25590323 25592345 - unprocessed_pseudogene KNOWN OTTHUMG00000045270.1 2023 421 2 ENSG00000225609.1 CDY20P chrY 25618644 25620253 + unprocessed_pseudogene KNOWN OTTHUMG00000045272.1 1610 1279 2 ENSG00000172288.7 CDY1 chrY 25622162 25624902 + protein_coding KNOWN OTTHUMG00000045274.2 2741 2625 3 ENSG00000270535.1 TCEB1P34 chrY 25662900 25663226 + processed_pseudogene KNOWN OTTHUMG00000185077.1 327 327 1 ENSG00000225287.1 OFD1P13Y chrY 25675060 25697346 - unprocessed_pseudogene KNOWN OTTHUMG00000045290.1 22287 1232 11 ENSG00000225256.1 TRAPPC2P5 chrY 25699451 25702562 + unprocessed_pseudogene KNOWN OTTHUMG00000045291.1 3112 308 3 ENSG00000223856.1 RAB9AP2 chrY 25709908 25713557 - unprocessed_pseudogene KNOWN OTTHUMG00000045292.1 3650 597 2 ENSG00000213553.4 RPLP0P6 chr2 38481851 38482804 + processed_pseudogene KNOWN OTTHUMG00000153430.1 954 954 1 ENSG00000235004.1 USP9YP30 chrY 25723016 25724186 + unprocessed_pseudogene KNOWN OTTHUMG00000045255.1 1171 455 3 ENSG00000252426.1 RNU1-107P chrY 25723342 25723495 + snRNA KNOWN NA 154 154 1 ENSG00000231141.1 TTTY3 chrY 25728490 25733388 + lincRNA KNOWN OTTHUMG00000045256.1 4899 344 3 ENSG00000232614.1 USP9YP9 chrY 25730011 25735160 - unprocessed_pseudogene KNOWN OTTHUMG00000045258.1 5150 715 4 ENSG00000225326.1 USP9YP19 chrY 25748596 25750206 - unprocessed_pseudogene KNOWN OTTHUMG00000045257.1 1611 485 2 ENSG00000223406.1 XKRYP5 chrY 25752388 25752870 + unprocessed_pseudogene KNOWN OTTHUMG00000045259.1 483 483 1 ENSG00000229343.1 CDY22P chrY 25813013 25814566 + unprocessed_pseudogene KNOWN OTTHUMG00000045287.1 1554 1554 1 ENSG00000232695.1 TCEB1P17 chrY 25860943 25861268 + processed_pseudogene KNOWN OTTHUMG00000045288.1 326 326 1 ENSG00000235511.1 OFD1P18Y chrY 25871931 25898653 - unprocessed_pseudogene KNOWN OTTHUMG00000045289.1 26723 959 8 ENSG00000232914.1 TRAPPC2P4 chrY 25904518 25907250 + unprocessed_pseudogene KNOWN OTTHUMG00000045261.1 2733 331 3 ENSG00000271443.1 RP11-541E12.1 chr2 38535258 38536249 - transcribed_processed_pseudogene KNOWN OTTHUMG00000184445.1 992 880 3 ENSG00000223655.1 RAB9AP3 chrY 25918323 25918895 - processed_pseudogene KNOWN OTTHUMG00000045262.1 573 573 1 ENSG00000230854.1 USP9YP20 chrY 25923388 25929826 + unprocessed_pseudogene KNOWN OTTHUMG00000045263.1 6439 558 5 ENSG00000252625.1 RNU1-40P chrY 25928979 25929142 + snRNA KNOWN NA 164 164 1 ENSG00000227635.1 USP9YP21 chrY 25933833 25935881 - unprocessed_pseudogene KNOWN OTTHUMG00000045265.1 2049 432 2 ENSG00000237546.1 XKRYP6 chrY 25943268 25954152 + unprocessed_pseudogene KNOWN OTTHUMG00000045267.1 10885 1116 2 ENSG00000172283.10 PRYP4 chrY 25975549 25988069 + unprocessed_pseudogene KNOWN OTTHUMG00000045269.2 12521 444 3 ENSG00000227867.1 TCEB1P11 chrY 25991241 25991572 - processed_pseudogene KNOWN OTTHUMG00000045271.1 332 332 1 ENSG00000231716.1 CDY23P chrY 25994684 25995697 - unprocessed_pseudogene KNOWN OTTHUMG00000045273.1 1014 1014 1 ENSG00000234744.1 USP9YP26 chrY 26002254 26008856 + unprocessed_pseudogene KNOWN OTTHUMG00000045275.1 6603 661 4 ENSG00000233156.1 HSFY8P chrY 26011435 26012237 + unprocessed_pseudogene KNOWN OTTHUMG00000045277.1 803 318 2 ENSG00000143889.14 HNRNPLL chr2 38561978 38603586 - protein_coding KNOWN OTTHUMG00000102075.3 41609 5923 112 ENSG00000234888.1 OFD1P15Y chrY 26055779 26088493 - unprocessed_pseudogene KNOWN OTTHUMG00000045278.1 32715 1392 8 ENSG00000215507.9 RBMY2DP chrY 26123674 26133308 + transcribed_processed_pseudogene KNOWN OTTHUMG00000045283.2 9635 1157 12 ENSG00000235014.1 REREP2Y chrY 26198331 26208148 - unprocessed_pseudogene KNOWN OTTHUMG00000046126.1 9818 200 2 ENSG00000225876.1 AC024067.1 chrY 26244351 26244573 - unprocessed_pseudogene KNOWN OTTHUMG00000036763.1 223 223 1 ENSG00000251796.1 SNORA70 chrY 26247384 26247521 + snoRNA NOVEL NA 138 138 1 ENSG00000229238.3 PPP1R12BP1 chrY 26277923 26354418 - unprocessed_pseudogene KNOWN OTTHUMG00000036764.2 76496 1671 13 ENSG00000252948.1 RNU6-1314P chrY 26360989 26361092 + snRNA KNOWN NA 104 104 1 ENSG00000233843.1 CYCSP48 chrY 26400611 26401230 + processed_pseudogene KNOWN OTTHUMG00000036766.1 620 323 2 ENSG00000188399.5 ANKRD36P1 chrY 26409815 26420535 + unprocessed_pseudogene KNOWN OTTHUMG00000036761.1 10721 659 5 ENSG00000275510.1 AC013734.1 chrY 26411059 26411158 - miRNA NOVEL NA 100 100 1 ENSG00000235586.1 AC011247.3 chr2 38601598 38602178 + antisense NOVEL OTTHUMG00000153432.1 581 233 2 ENSG00000277146.1 RP11-557B9.1 chrY 26453982 26454092 + processed_pseudogene KNOWN OTTHUMG00000188106.1 111 111 1 ENSG00000215506.5 TPTE2P4 chrY 26508213 26579690 + unprocessed_pseudogene KNOWN OTTHUMG00000036765.1 71478 1605 20 ENSG00000224240.1 CYCSP49 chrY 26549425 26549743 + processed_pseudogene KNOWN OTTHUMG00000036760.1 319 319 1 ENSG00000227629.1 SLC25A15P1 chrY 26586642 26591601 - unprocessed_pseudogene KNOWN OTTHUMG00000036811.1 4960 342 3 ENSG00000237917.1 PARP4P1 chrY 26594851 26634652 - unprocessed_pseudogene KNOWN OTTHUMG00000036812.1 39802 2337 13 ENSG00000231514.1 FAM58CP chrY 26626520 26627159 - processed_pseudogene KNOWN OTTHUMG00000036813.1 640 640 1 ENSG00000235857.1 CTBP2P1 chrY 56855244 56855488 + processed_pseudogene KNOWN OTTHUMG00000036770.1 245 245 1 ENSG00000210049.1 MT-TF chrM 577 647 + Mt_tRNA KNOWN NA 71 71 1 ENSG00000211459.2 MT-RNR1 chrM 648 1601 + Mt_rRNA KNOWN NA 954 954 1 ENSG00000210077.1 MT-TV chrM 1602 1670 + Mt_tRNA KNOWN NA 69 69 1 ENSG00000143891.15 GALM chr2 38665910 38741237 + protein_coding KNOWN OTTHUMG00000102077.4 75328 2790 27 ENSG00000210082.2 MT-RNR2 chrM 1671 3229 + Mt_rRNA KNOWN NA 1559 1559 1 ENSG00000209082.1 MT-TL1 chrM 3230 3304 + Mt_tRNA KNOWN NA 75 75 1 ENSG00000198888.2 MT-ND1 chrM 3307 4262 + protein_coding KNOWN NA 956 956 1 ENSG00000210100.1 MT-TI chrM 4263 4331 + Mt_tRNA KNOWN NA 69 69 1 ENSG00000210107.1 MT-TQ chrM 4329 4400 - Mt_tRNA KNOWN NA 72 72 1 ENSG00000210112.1 MT-TM chrM 4402 4469 + Mt_tRNA KNOWN NA 68 68 1 ENSG00000198763.3 MT-ND2 chrM 4470 5511 + protein_coding KNOWN NA 1042 1042 1 ENSG00000210117.1 MT-TW chrM 5512 5579 + Mt_tRNA KNOWN NA 68 68 1 ENSG00000210127.1 MT-TA chrM 5587 5655 - Mt_tRNA KNOWN NA 69 69 1 ENSG00000210135.1 MT-TN chrM 5657 5729 - Mt_tRNA KNOWN NA 73 73 1 ENSG00000232518.2 AC074366.3 chr2 38668202 38671421 - antisense NOVEL OTTHUMG00000153449.2 3220 1086 15 ENSG00000210140.1 MT-TC chrM 5761 5826 - Mt_tRNA KNOWN NA 66 66 1 ENSG00000210144.1 MT-TY chrM 5826 5891 - Mt_tRNA KNOWN NA 66 66 1 ENSG00000198804.2 MT-CO1 chrM 5904 7445 + protein_coding KNOWN NA 1542 1542 1 ENSG00000210151.2 MT-TS1 chrM 7446 7514 - Mt_tRNA KNOWN NA 69 69 1 ENSG00000210154.1 MT-TD chrM 7518 7585 + Mt_tRNA KNOWN NA 68 68 1 ENSG00000198712.1 MT-CO2 chrM 7586 8269 + protein_coding KNOWN NA 684 684 1 ENSG00000210156.1 MT-TK chrM 8295 8364 + Mt_tRNA KNOWN NA 70 70 1 ENSG00000228253.1 MT-ATP8 chrM 8366 8572 + protein_coding KNOWN NA 207 207 1 ENSG00000198899.2 MT-ATP6 chrM 8527 9207 + protein_coding KNOWN NA 681 681 1 ENSG00000198938.2 MT-CO3 chrM 9207 9990 + protein_coding KNOWN NA 784 784 1 ENSG00000115875.17 SRSF7 chr2 38743599 38751494 - protein_coding KNOWN OTTHUMG00000102076.5 7896 4045 80 ENSG00000210164.1 MT-TG chrM 9991 10058 + Mt_tRNA KNOWN NA 68 68 1 ENSG00000198840.2 MT-ND3 chrM 10059 10404 + protein_coding KNOWN NA 346 346 1 ENSG00000210174.1 MT-TR chrM 10405 10469 + Mt_tRNA KNOWN NA 65 65 1 ENSG00000212907.2 MT-ND4L chrM 10470 10766 + protein_coding KNOWN NA 297 297 1 ENSG00000198886.2 MT-ND4 chrM 10760 12137 + protein_coding KNOWN NA 1378 1378 1 ENSG00000210176.1 MT-TH chrM 12138 12206 + Mt_tRNA KNOWN NA 69 69 1 ENSG00000210184.1 MT-TS2 chrM 12207 12265 + Mt_tRNA KNOWN NA 59 59 1 ENSG00000210191.1 MT-TL2 chrM 12266 12336 + Mt_tRNA KNOWN NA 71 71 1 ENSG00000198786.2 MT-ND5 chrM 12337 14148 + protein_coding KNOWN NA 1812 1812 1 ENSG00000198695.2 MT-ND6 chrM 14149 14673 - protein_coding KNOWN NA 525 525 1 ENSG00000152147.9 GEMIN6 chr2 38751534 38785000 + protein_coding KNOWN OTTHUMG00000128588.3 33467 4361 13 ENSG00000210194.1 MT-TE chrM 14674 14742 - Mt_tRNA KNOWN NA 69 69 1 ENSG00000198727.2 MT-CYB chrM 14747 15887 + protein_coding KNOWN NA 1141 1141 1 ENSG00000210195.2 MT-TT chrM 15888 15953 + Mt_tRNA KNOWN NA 66 66 1 ENSG00000210196.2 MT-TP chrM 15956 16023 - Mt_tRNA KNOWN NA 68 68 1 ENSG00000227238.1 TTC39DP chr2 38763534 38765221 + unitary_pseudogene KNOWN OTTHUMG00000153484.2 1688 1688 1 ENSG00000278471.1 AL136529.1 chr1 17747169 17747222 + miRNA NOVEL NA 54 54 1 ENSG00000232114.1 AC018693.5 chr2 38769265 38770124 + processed_pseudogene KNOWN OTTHUMG00000153505.1 860 530 2 ENSG00000163214.19 DHX57 chr2 38797729 38875934 - protein_coding KNOWN OTTHUMG00000102103.8 78206 7985 113 ENSG00000223922.1 ASS1P2 chr2 38810432 38811654 - processed_pseudogene KNOWN OTTHUMG00000153539.1 1223 1223 1 ENSG00000225284.1 AC018693.6 chr2 38861720 38863133 + antisense NOVEL OTTHUMG00000153519.1 1414 550 2 ENSG00000188010.11 MORN2 chr2 38875962 38929072 + protein_coding KNOWN OTTHUMG00000128589.3 53111 1364 32 ENSG00000207295.1 RNU6-851P chr2 38884560 38884666 - snRNA KNOWN NA 107 107 1 ENSG00000214694.9 ARHGEF33 chr2 38889880 38975449 + protein_coding KNOWN OTTHUMG00000153540.1 85570 5490 54 ENSG00000265905.2 RN7SL96P chr2 38936876 38937158 - misc_RNA KNOWN NA 283 283 1 ENSG00000269210.2 RP11-173C1.1 chr2 38959287 38960342 - antisense NOVEL OTTHUMG00000187088.1 1056 1056 1 ENSG00000281070.1 AC019171.1 chr2 38977203 38977287 - miRNA NOVEL NA 85 85 1 ENSG00000117148.7 ACTL8 chr1 17755313 17827063 + protein_coding KNOWN OTTHUMG00000002512.1 71751 1864 5 ENSG00000115904.11 SOS1 chr2 38981396 39124345 - protein_coding KNOWN OTTHUMG00000102109.4 142950 9263 84 ENSG00000229692.3 SOS1-IT1 chr2 38992279 38993857 - sense_intronic NOVEL OTTHUMG00000153569.3 1579 1254 6 ENSG00000206985.1 RNU6-198P chr2 39082589 39082692 + snRNA KNOWN NA 104 104 1 ENSG00000225900.1 HSPE1P13 chr2 39098149 39098445 - processed_pseudogene KNOWN OTTHUMG00000153568.1 297 297 1 ENSG00000202309.1 Y_RNA chr2 39128826 39128927 - misc_RNA NOVEL NA 102 102 1 ENSG00000205111.7 CDKL4 chr2 39175646 39229588 - protein_coding KNOWN OTTHUMG00000133574.2 53943 2074 24 ENSG00000011566.13 MAP4K3 chr2 39249266 39437312 - protein_coding KNOWN OTTHUMG00000102127.4 188047 6067 146 ENSG00000252473.1 SNORA67 chr2 39283657 39283791 - snoRNA NOVEL NA 135 135 1 ENSG00000273035.1 RP11-449G16.1 chr2 39323328 39323804 - sense_intronic NOVEL OTTHUMG00000185858.1 477 477 1 ENSG00000223179.2 RNU6-373P chr2 39393522 39393618 - snRNA KNOWN NA 97 97 1 ENSG00000261781.1 RP11-174G17.2 chr1 18065657 18074412 + lincRNA NOVEL OTTHUMG00000175750.1 8756 2471 3 ENSG00000231312.5 AC007246.3 chr2 39436637 39665343 + antisense NOVEL OTTHUMG00000152299.2 228707 6741 49 ENSG00000152154.9 TMEM178A chr2 39664982 39717963 + protein_coding KNOWN OTTHUMG00000128591.2 52982 2470 24 ENSG00000138050.13 THUMPD2 chr2 39736060 39779267 - protein_coding KNOWN OTTHUMG00000102149.4 43208 3823 56 ENSG00000227028.5 SLC8A1-AS1 chr2 39786453 40255209 + antisense NOVEL OTTHUMG00000152308.5 468757 8475 174 ENSG00000235653.1 AC007253.1 chr2 39929110 39929998 + processed_pseudogene KNOWN OTTHUMG00000152309.1 889 889 1 ENSG00000183023.17 SLC8A1 chr2 40097270 40611053 - protein_coding KNOWN OTTHUMG00000102183.7 513784 21922 86 ENSG00000233128.1 AC007317.1 chr2 40746487 40767452 + lincRNA NOVEL OTTHUMG00000152401.1 20966 549 4 ENSG00000237442.3 HNRNPA1P57 chr2 41143780 41157555 + transcribed_processed_pseudogene KNOWN OTTHUMG00000152297.3 13776 1271 4 ENSG00000221372.1 AC010739.1 chr2 41596386 41596492 + miRNA NOVEL NA 107 107 1 ENSG00000236090.2 LDHAP3 chr2 41819747 41820754 + processed_pseudogene KNOWN OTTHUMG00000152304.3 1008 1008 1 ENSG00000117154.10 IGSF21 chr1 18107746 18378483 + protein_coding KNOWN OTTHUMG00000002432.3 270738 3085 24 ENSG00000236533.1 AC009413.2 chr2 41850203 41850601 - processed_pseudogene KNOWN OTTHUMG00000152300.2 399 399 1 ENSG00000207218.1 Y_RNA chr2 41857271 41857372 - misc_RNA NOVEL NA 102 102 1 ENSG00000223245.1 RNU4-63P chr2 41871271 41871388 + snRNA KNOWN NA 118 118 1 ENSG00000214691.7 AC104654.1 chr2 41877074 41894046 + lincRNA NOVEL OTTHUMG00000152301.4 16973 2215 7 ENSG00000234362.4 AC104654.2 chr2 41931599 41933723 - lincRNA NOVEL OTTHUMG00000152505.2 2125 898 7 ENSG00000205086.6 C2orf91 chr2 41935368 41954266 - protein_coding KNOWN OTTHUMG00000152307.1 18899 4038 8 ENSG00000278093.1 AC013480.1 chr2 41947056 41947147 - miRNA NOVEL NA 92 92 1 ENSG00000226398.1 AC013480.2 chr2 42015625 42025302 - antisense NOVEL OTTHUMG00000152306.2 9678 346 3 ENSG00000162878.11 PKDCC chr2 42048020 42058528 + protein_coding KNOWN OTTHUMG00000152303.4 10509 3925 34 ENSG00000224875.2 AC083949.1 chr2 42143238 42170301 - antisense NOVEL OTTHUMG00000152629.2 27064 947 6 ENSG00000280222.1 RP11-174G17.3 chr1 18109389 18115861 + TEC KNOWN OTTHUMG00000175756.1 6473 6473 1 ENSG00000143924.17 EML4 chr2 42169350 42332548 + protein_coding KNOWN OTTHUMG00000128603.6 163199 8357 96 ENSG00000115944.13 COX7A2L chr2 42333546 42425088 - protein_coding KNOWN OTTHUMG00000128605.7 91543 5605 26 ENSG00000221300.1 SNORD75 chr2 42440377 42440436 + snoRNA NOVEL NA 60 60 1 ENSG00000171126.7 KCNG3 chr2 42442017 42494097 - protein_coding KNOWN OTTHUMG00000128604.3 52081 3824 4 ENSG00000232526.1 VDAC1P13 chr2 42463139 42463997 - processed_pseudogene KNOWN OTTHUMG00000152314.3 859 859 1 ENSG00000236913.1 AC025750.5 chr2 42469817 42470266 + processed_pseudogene KNOWN OTTHUMG00000152313.2 450 450 1 ENSG00000057935.12 MTA3 chr2 42494569 42756947 + protein_coding KNOWN OTTHUMG00000150452.4 262379 10580 170 ENSG00000273913.1 Metazoa_SRP chr2 42511570 42511851 + misc_RNA NOVEL NA 282 282 1 ENSG00000215263.2 AC025750.7 chr2 42532766 42533442 - processed_pseudogene KNOWN OTTHUMG00000152329.2 677 379 2 ENSG00000226523.1 AC074375.1 chr2 42680088 42680279 - processed_pseudogene KNOWN OTTHUMG00000152328.2 192 192 1 ENSG00000228794.7 LINC01128 chr1 825138 859446 + processed_transcript NOVEL OTTHUMG00000002468.7 34309 9470 62 ENSG00000230035.2 RP11-174G17 chr1 18166929 18179346 - antisense NOVEL OTTHUMG00000002434.2 12418 430 4 ENSG00000200550.1 RNU6-137P chr2 42712740 42712847 + snRNA KNOWN NA 108 108 1 ENSG00000162881.6 OXER1 chr2 42762481 42764261 - protein_coding KNOWN OTTHUMG00000128643.1 1781 1781 1 ENSG00000162882.13 HAAO chr2 42767089 42792593 - protein_coding KNOWN OTTHUMG00000152348.4 25505 2726 46 ENSG00000226491.1 FTOP1 chr2 42797225 42798712 - processed_pseudogene KNOWN OTTHUMG00000152364.2 1488 861 3 ENSG00000232202.1 AC098824.6 chr2 42826322 42827617 - processed_pseudogene KNOWN OTTHUMG00000152363.2 1296 980 2 ENSG00000224739.2 AC016735.1 chr2 43001355 43006060 - lincRNA NOVEL OTTHUMG00000152375.3 4706 237 3 ENSG00000231826.4 AC016735.2 chr2 43027853 43039547 - lincRNA NOVEL OTTHUMG00000152373.2 11695 2759 13 ENSG00000233978.1 AC016735.3 chr2 43041193 43043782 - lincRNA NOVEL OTTHUMG00000152376.1 2590 569 2 ENSG00000207087.1 RNU6-242P chr2 43091388 43091494 - snRNA KNOWN NA 107 107 1 ENSG00000230587.1 AC093609.1 chr2 43097746 43102691 - lincRNA NOVEL OTTHUMG00000152374.2 4946 952 2 ENSG00000225387.1 RP11-422P22.1 chr1 18385829 18388514 + lincRNA NOVEL OTTHUMG00000002437.1 2686 491 2 ENSG00000152518.6 ZFP36L2 chr2 43222402 43226609 - protein_coding KNOWN OTTHUMG00000128642.2 4208 3696 6 ENSG00000279873.2 LINC01126 chr2 43227210 43228855 + lincRNA KNOWN OTTHUMG00000152397.3 1646 1646 1 ENSG00000234936.1 AC010883.5 chr2 43229573 43233394 + antisense NOVEL OTTHUMG00000152402.2 3822 398 3 ENSG00000115970.17 THADA chr2 43230836 43596046 - protein_coding KNOWN OTTHUMG00000152398.10 365211 14220 284 ENSG00000252804.1 RNU6-958P chr2 43408307 43408412 + snRNA KNOWN NA 106 106 1 ENSG00000264071.2 RN7SL531P chr2 43492032 43492313 + misc_RNA KNOWN NA 282 282 1 ENSG00000207411.1 Y_RNA chr2 43620878 43620984 - misc_RNA NOVEL NA 107 107 1 ENSG00000152527.12 PLEKHH2 chr2 43637273 43767987 + protein_coding KNOWN OTTHUMG00000128657.7 130715 9835 106 ENSG00000223658.6 AC011242.6 chr2 43675380 43676322 - processed_pseudogene KNOWN OTTHUMG00000152807.2 943 943 1 ENSG00000229695.1 AC011242.5 chr2 43680465 43681622 - processed_pseudogene KNOWN OTTHUMG00000152470.2 1158 1158 1 ENSG00000179023.8 KLHDC7A chr1 18480982 18486126 + protein_coding KNOWN OTTHUMG00000002431.3 5145 5145 1 ENSG00000252490.1 RN7SKP66 chr2 43772120 43772350 - misc_RNA KNOWN NA 231 231 1 ENSG00000138036.17 DYNC2LI1 chr2 43774039 43810010 + protein_coding KNOWN OTTHUMG00000128656.9 35972 4618 80 ENSG00000138075.10 ABCG5 chr2 43812472 43838865 - protein_coding KNOWN OTTHUMG00000128758.5 26394 3720 41 ENSG00000143921.6 ABCG8 chr2 43838964 43878466 + protein_coding KNOWN OTTHUMG00000128756.1 39503 2665 13 ENSG00000138095.17 LRPPRC chr2 43886508 43996005 - protein_coding KNOWN OTTHUMG00000152782.11 109498 9760 98 ENSG00000200924.1 RNU6-1048P chr2 43892690 43892796 + snRNA KNOWN NA 107 107 1 ENSG00000264047.2 RN7SL455P chr2 43904412 43904693 + misc_RNA KNOWN NA 282 282 1 ENSG00000276967.1 AC019129.2 chr2 44065488 44065544 - miRNA NOVEL NA 57 57 1 ENSG00000219391.1 AC019129.1 chr2 44065894 44066154 - processed_pseudogene KNOWN OTTHUMG00000152408.2 261 261 1 ENSG00000252599.1 RNU6-566P chr2 44154789 44154895 - snRNA KNOWN NA 107 107 1 ENSG00000235282.3 DYNLL1P3 chr1 18513118 18513383 + processed_pseudogene KNOWN OTTHUMG00000002435.4 266 266 1 ENSG00000224637.1 PDSS1P2 chr2 44166266 44166943 + unprocessed_pseudogene KNOWN OTTHUMG00000152784.1 678 678 1 ENSG00000273106.1 RP11-559M23.1 chr2 44167625 44168859 - antisense NOVEL OTTHUMG00000185892.1 1235 1235 1 ENSG00000138032.19 PPM1B chr2 44167969 44244384 + protein_coding KNOWN OTTHUMG00000128757.17 76416 7103 54 ENSG00000226972.2 AC013717.3 chr2 44270621 44271106 + processed_pseudogene KNOWN OTTHUMG00000152783.2 486 486 1 ENSG00000138079.12 SLC3A1 chr2 44275458 44321494 + protein_coding KNOWN OTTHUMG00000128759.4 46037 6541 72 ENSG00000138078.14 PREPL chr2 44316281 44361862 - protein_coding KNOWN OTTHUMG00000152791.6 45582 8153 176 ENSG00000143919.13 CAMKMT chr2 44361950 44772592 + protein_coding KNOWN OTTHUMG00000128761.4 410643 3991 56 ENSG00000252896.1 AC067957.1 chr2 44782046 44782130 - miRNA NOVEL NA 85 85 1 ENSG00000259439.2 RP11-89K21.1 chr2 44921077 44939199 - lincRNA NOVEL OTTHUMG00000172199.2 18123 3872 11 ENSG00000278957.1 RP11-89K21.2 chr2 44927914 44928396 - TEC KNOWN OTTHUMG00000184122.1 483 483 1 ENSG00000225478.2 RP1-8B22.2 chr1 18595414 18595636 + processed_pseudogene KNOWN OTTHUMG00000002436.3 223 223 1 ENSG00000274520.1 Six3os1_1 chr2 44932320 44932406 + misc_RNA NOVEL NA 87 87 1 ENSG00000277311.1 Six3os1_2 chr2 44934055 44934271 + misc_RNA NOVEL NA 217 217 1 ENSG00000276229.1 Six3os1_3 chr2 44935294 44935368 + misc_RNA NOVEL NA 75 75 1 ENSG00000277809.1 Six3os1_4 chr2 44935585 44935908 + misc_RNA NOVEL NA 324 324 1 ENSG00000276048.1 Six3os1_5 chr2 44937426 44937696 + misc_RNA NOVEL NA 271 271 1 ENSG00000274547.1 Six3os1_6 chr2 44938833 44939028 + misc_RNA NOVEL NA 196 196 1 ENSG00000276670.1 Six3os1_7 chr2 44940045 44940245 + misc_RNA NOVEL NA 201 201 1 ENSG00000236502.1 SIX3-AS1 chr2 44940154 44941873 - lincRNA KNOWN OTTHUMG00000152423.1 1720 1151 4 ENSG00000138083.4 SIX3 chr2 44941898 44946077 + protein_coding KNOWN OTTHUMG00000152424.2 4180 2523 2 ENSG00000225156.2 AC012354.6 chr2 44954664 44968762 + lincRNA NOVEL OTTHUMG00000152422.2 14099 2685 4 ENSG00000009709.10 PAX7 chr1 18631006 18748866 + protein_coding KNOWN OTTHUMG00000002433.2 117861 6313 25 ENSG00000231848.1 AC012354.8 chr2 44996413 44996873 + processed_pseudogene KNOWN OTTHUMG00000152426.1 461 461 1 ENSG00000170577.7 SIX2 chr2 45005161 45009430 - protein_coding KNOWN OTTHUMG00000152421.2 4270 2205 2 ENSG00000231156.1 AC093702.1 chr2 45013214 45013668 - lincRNA NOVEL OTTHUMG00000152444.1 455 367 2 ENSG00000205054.5 LINC01121 chr2 45164870 45323295 - processed_transcript NOVEL OTTHUMG00000152484.2 158426 4131 18 ENSG00000231054.1 AC009236.2 chr2 45168583 45169414 + lincRNA NOVEL OTTHUMG00000152442.1 832 553 2 ENSG00000068784.11 SRBD1 chr2 45388680 45612165 - protein_coding KNOWN OTTHUMG00000128814.4 223486 5045 43 ENSG00000239396.3 RN7SL414P chr2 45569199 45569492 - misc_RNA KNOWN NA 294 294 1 ENSG00000171132.12 PRKCE chr2 45651345 46187990 + protein_coding KNOWN OTTHUMG00000128817.7 536646 9908 79 ENSG00000228481.1 U51244.2 chr2 45674701 45675476 - antisense NOVEL OTTHUMG00000151675.1 776 374 2 ENSG00000233829.1 AC017078.1 chr2 46003942 46004309 - processed_pseudogene KNOWN OTTHUMG00000151720.1 368 368 1 ENSG00000179002.5 TAS1R2 chr1 18839599 18859682 - protein_coding KNOWN OTTHUMG00000002442.1 20084 2542 6 ENSG00000232696.1 AC017006.2 chr2 46078015 46078828 - antisense NOVEL OTTHUMG00000151722.1 814 464 2 ENSG00000231336.1 AC017006.3 chr2 46166789 46167978 - antisense NOVEL OTTHUMG00000151721.1 1190 364 2 ENSG00000233335.1 AC016696.1 chr2 46256860 46257177 - processed_pseudogene KNOWN OTTHUMG00000152813.1 318 318 1 ENSG00000278764.1 Metazoa_SRP chr2 46266690 46266971 + misc_RNA NOVEL NA 282 282 1 ENSG00000116016.12 EPAS1 chr2 46293667 46386703 + protein_coding KNOWN OTTHUMG00000128818.23 93037 7302 51 ENSG00000228100.1 AC016912.3 chr2 46392297 46394167 - lincRNA NOVEL OTTHUMG00000153138.1 1871 570 3 ENSG00000187600.11 TMEM247 chr2 46429190 46484425 + protein_coding KNOWN OTTHUMG00000153137.2 55236 1682 19 ENSG00000241791.3 RN7SL817P chr2 46448224 46448511 - misc_RNA KNOWN NA 288 288 1 ENSG00000250565.5 ATP6V1E2 chr2 46490750 46542557 - protein_coding KNOWN OTTHUMG00000128819.2 51808 5283 23 ENSG00000253515.1 RP11-417F21.2 chr2 46499731 46501278 + antisense NOVEL OTTHUMG00000164841.1 1548 399 2 ENSG00000255275.3 RP13-279N23.2 chr1 18849273 18921121 - protein_coding NOVEL OTTHUMG00000167131.3 71849 4369 27 ENSG00000119729.9 RHOQ chr2 46541806 46583121 + protein_coding KNOWN OTTHUMG00000150653.2 41316 4619 35 ENSG00000250116.2 RP11-417F21.1 chr2 46568256 46580238 - antisense NOVEL OTTHUMG00000164842.1 11983 1519 2 ENSG00000151665.11 PIGF chr2 46580937 46617119 - protein_coding KNOWN OTTHUMG00000128816.3 36183 4978 28 ENSG00000119878.5 CRIPT chr2 46616416 46625742 + protein_coding KNOWN OTTHUMG00000128815.2 9327 2561 10 ENSG00000279254.1 RP11-536C12.1 chr2 46668870 46670778 + TEC KNOWN OTTHUMG00000175848.1 1909 1909 1 ENSG00000171150.7 SOCS5 chr2 46698952 46763129 + protein_coding KNOWN OTTHUMG00000128852.2 64178 5034 4 ENSG00000260977.1 RP11-333I13.1 chr2 46777783 46780245 + lincRNA NOVEL OTTHUMG00000175854.1 2463 2463 1 ENSG00000222005.7 LINC01118 chr2 46816668 46822657 + lincRNA NOVEL OTTHUMG00000153080.2 5990 2267 10 ENSG00000239332.4 LINC01119 chr2 46816697 46859007 + lincRNA NOVEL OTTHUMG00000153081.3 42311 2830 11 ENSG00000226548.1 AC016722.3 chr2 46852020 46853496 - lincRNA NOVEL OTTHUMG00000153084.1 1477 652 2 ENSG00000159423.15 ALDH4A1 chr1 18871430 18902781 - protein_coding KNOWN OTTHUMG00000002443.5 31352 3689 70 ENSG00000228925.1 AC016722.4 chr2 46899275 46908678 + antisense NOVEL OTTHUMG00000153091.2 9404 1835 2 ENSG00000180398.10 MCFD2 chr2 46901870 46941855 - protein_coding KNOWN OTTHUMG00000153100.2 39986 5994 57 ENSG00000068724.14 TTC7A chr2 46916157 47076137 + protein_coding KNOWN OTTHUMG00000153121.4 159981 6949 168 ENSG00000272814.1 RP11-15I20.1 chr2 46956615 46956888 - antisense NOVEL OTTHUMG00000185909.1 274 274 1 ENSG00000233845.1 AC093732.1 chr2 47035279 47040524 - antisense NOVEL OTTHUMG00000153135.1 5246 504 2 ENSG00000239605.7 C2orf61 chr2 47045538 47155378 - protein_coding KNOWN OTTHUMG00000128851.2 109841 3273 24 ENSG00000281003.1 Metazoa_SRP chr2 47060224 47060466 + misc_RNA NOVEL NA 243 243 1 ENSG00000273269.1 RP11-761B3.1 chr2 47065941 47176511 - protein_coding NOVEL OTTHUMG00000185936.1 110571 983 9 ENSG00000225187.1 AC073283.7 chr2 47067822 47071204 + antisense NOVEL OTTHUMG00000153134.1 3383 860 2 ENSG00000143933.15 CALM2 chr2 47160082 47176601 - protein_coding KNOWN OTTHUMG00000128850.8 16520 6466 50 ENSG00000265606.1 MIR4695 chr1 18883202 18883275 - miRNA KNOWN NA 74 74 1 ENSG00000234690.5 AC073283.4 chr2 47192405 47345074 - lincRNA NOVEL OTTHUMG00000151698.6 152670 3552 19 ENSG00000226087.1 AC106869.2 chr2 47225794 47239225 + lincRNA NOVEL OTTHUMG00000151712.2 13432 677 4 ENSG00000236824.1 BCYRN1 chr2 47331060 47344517 + lincRNA KNOWN OTTHUMG00000151778.1 13458 13458 1 ENSG00000119888.9 EPCAM chr2 47345158 47387601 + protein_coding KNOWN OTTHUMG00000128853.8 42444 2519 42 ENSG00000222685.1 RN7SKP119 chr2 47359505 47359777 - misc_RNA KNOWN NA 273 273 1 ENSG00000207923.1 MIR559 chr2 47377675 47377770 + miRNA KNOWN NA 96 96 1 ENSG00000277396.1 Metazoa_SRP chr2 47383160 47383421 + misc_RNA NOVEL NA 262 262 1 ENSG00000095002.11 MSH2 chr2 47402969 47562311 + protein_coding KNOWN OTTHUMG00000128861.7 159343 4552 143 ENSG00000184261.4 KCNK12 chr2 47516581 47570939 - protein_coding KNOWN OTTHUMG00000129131.3 54359 6685 4 ENSG00000235760.3 HCG2040054 chr2 47527537 47535199 + antisense NOVEL OTTHUMG00000151664.5 7663 762 5 ENSG00000225880.5 LINC00115 chr1 826206 827522 - lincRNA KNOWN OTTHUMG00000141258.2 1317 1317 1 ENSG00000221662.1 MIR1290 chr1 18897071 18897148 - miRNA KNOWN NA 78 78 1 ENSG00000230979.3 AC079250.1 chr2 47690716 47691246 - processed_pseudogene KNOWN OTTHUMG00000151670.1 531 531 1 ENSG00000116062.13 MSH6 chr2 47695530 47810101 + protein_coding KNOWN OTTHUMG00000129129.9 114572 10993 91 ENSG00000224443.1 AC006509.4 chr2 47705468 47705979 + processed_pseudogene KNOWN OTTHUMG00000151672.2 512 395 2 ENSG00000224058.2 AC006509.7 chr2 47731402 47732035 - processed_pseudogene KNOWN OTTHUMG00000151828.2 634 634 1 ENSG00000138081.18 FBXO11 chr2 47789316 47905793 - protein_coding KNOWN OTTHUMG00000129130.5 116478 7074 122 ENSG00000235369.1 RPL36AP15 chr2 47797826 47798091 - processed_pseudogene KNOWN OTTHUMG00000151838.1 266 266 1 ENSG00000236549.1 AC079807.3 chr2 47883455 47883909 + processed_pseudogene KNOWN OTTHUMG00000151835.1 455 455 1 ENSG00000233230.1 AC079807.2 chr2 47905678 47907810 + antisense NOVEL OTTHUMG00000151834.2 2133 856 6 ENSG00000226473.2 AC079807.1 chr2 47939738 47940218 - processed_pseudogene KNOWN OTTHUMG00000151738.1 481 481 1 ENSG00000230773.5 AC079807.4 chr2 47941696 48240983 - lincRNA NOVEL OTTHUMG00000151756.5 299288 2881 20 ENSG00000169991.9 IFFO2 chr1 18904281 18956686 - protein_coding KNOWN OTTHUMG00000002499.2 52406 6188 20 ENSG00000275423.1 RP11-429P7.1 chr2 47989625 47990526 + processed_pseudogene KNOWN OTTHUMG00000187526.1 902 902 1 ENSG00000201010.1 RN7SKP224 chr2 48217575 48217899 + misc_RNA KNOWN NA 325 325 1 ENSG00000170802.14 FOXN2 chr2 48314637 48379294 + protein_coding KNOWN OTTHUMG00000129168.5 64658 5481 18 ENSG00000251889.1 RNU4-49P chr2 48340687 48340826 - snRNA KNOWN NA 140 140 1 ENSG00000272663.1 RP11-191L17.1 chr2 48440043 48440597 - lincRNA NOVEL OTTHUMG00000185920.2 555 555 1 ENSG00000162869.14 PPP1R21 chr2 48440598 48515391 + protein_coding KNOWN OTTHUMG00000129167.11 74794 3995 125 ENSG00000202227.1 RNU6-282P chr2 48501922 48502024 - snRNA KNOWN NA 103 103 1 ENSG00000243244.4 STON1 chr2 48529383 48598513 + protein_coding KNOWN OTTHUMG00000129169.5 69131 7709 14 ENSG00000068781.19 STON1-GTF2A1L chr2 48529925 48776517 + protein_coding KNOWN OTTHUMG00000152037.5 246593 4302 55 ENSG00000242441.6 GTF2A1L chr2 48617798 48733148 + protein_coding KNOWN OTTHUMG00000152038.16 115351 2054 43 ENSG00000272084.1 RP5-1126H10.2 chr1 19072110 19075511 - 3prime_overlapping_ncrna NOVEL OTTHUMG00000185684.1 3402 3402 1 ENSG00000279956.1 RP11-310N16.1 chr2 48632291 48755724 - protein_coding NOVEL OTTHUMG00000189455.1 123434 2103 13 ENSG00000239995.2 TPT1P11 chr2 48632856 48633353 - transcribed_processed_pseudogene KNOWN OTTHUMG00000151767.2 498 498 1 ENSG00000138039.13 LHCGR chr2 48686775 48755730 - protein_coding KNOWN OTTHUMG00000129257.10 68956 4999 53 ENSG00000232285.1 TCEB2P3 chr2 48780602 48780895 + processed_pseudogene KNOWN OTTHUMG00000152104.1 294 294 1 ENSG00000214602.3 CTBP2P5 chr2 48915267 48916530 - processed_pseudogene KNOWN OTTHUMG00000151768.1 1264 1264 1 ENSG00000170820.10 FSHR chr2 48962157 49154537 - protein_coding KNOWN OTTHUMG00000129259.3 192381 3170 42 ENSG00000206915.1 RNU6-439P chr2 49233794 49233899 - snRNA KNOWN NA 106 106 1 ENSG00000234253.1 RPL7P13 chr2 49878623 49879363 + processed_pseudogene KNOWN OTTHUMG00000151779.1 741 741 1 ENSG00000212580.1 SNORA75 chr2 49888868 49888986 - snoRNA NOVEL NA 119 119 1 ENSG00000179915.19 NRXN1 chr2 49918505 51032561 - protein_coding KNOWN OTTHUMG00000129263.17 1114057 18156 270 ENSG00000127481.13 UBR4 chr1 19074506 19210276 - protein_coding KNOWN OTTHUMG00000002498.4 135771 24675 261 ENSG00000276506.1 AC068715.1 chr2 50381657 50381751 + miRNA NOVEL NA 95 95 1 ENSG00000230327.1 AC009234.1 chr2 50588690 50589415 - processed_pseudogene KNOWN OTTHUMG00000151798.2 726 726 1 ENSG00000216191.1 MIR8485 chr2 50696172 50696262 - miRNA KNOWN NA 91 91 1 ENSG00000215968.2 AC007560.2 chr2 50798964 50799055 - miRNA NOVEL NA 92 92 1 ENSG00000238165.1 AC007560.1 chr2 50829442 50829678 - processed_pseudogene KNOWN OTTHUMG00000151799.1 237 237 1 ENSG00000274815.1 AC007682.3 chr2 50943286 50943396 + miRNA NOVEL NA 111 111 1 ENSG00000272385.1 AC007682.2 chr2 50961245 50961333 + miRNA NOVEL NA 89 89 1 ENSG00000281171.1 AC007682.4 chr2 51027953 51028097 + miRNA NOVEL NA 145 145 1 ENSG00000231918.1 AC007682.1 chr2 51032601 52407917 + lincRNA NOVEL OTTHUMG00000144189.3 1375317 3939 11 ENSG00000237374.4 AC007680.2 chr2 51202081 51221764 - lincRNA NOVEL OTTHUMG00000151842.4 19684 499 6 ENSG00000230424.1 RP1-43E13.2 chr1 19210501 19240704 + antisense NOVEL OTTHUMG00000037839.1 30204 507 2 ENSG00000222692.1 AC007402.1 chr2 51435122 51435218 - miRNA NOVEL NA 97 97 1 ENSG00000224344.1 KNOP1P3 chr2 51511058 51511483 + processed_pseudogene KNOWN OTTHUMG00000102135.2 426 426 1 ENSG00000223710.1 CRYGGP chr2 51775258 51775402 - unprocessed_pseudogene KNOWN OTTHUMG00000058411.1 145 145 1 ENSG00000230840.1 AC097463.2 chr2 51925692 51925833 - processed_pseudogene KNOWN OTTHUMG00000128421.1 142 142 1 ENSG00000226366.1 AC097463.1 chr2 51926882 51927362 - processed_pseudogene KNOWN OTTHUMG00000058410.2 481 481 1 ENSG00000236538.1 ZNF863P chr2 52071355 52077197 + processed_pseudogene KNOWN OTTHUMG00000151841.3 5843 417 3 ENSG00000202195.1 Y_RNA chr2 52297995 52298096 + misc_RNA NOVEL NA 102 102 1 ENSG00000225444.1 AC087073.1 chr2 52373118 52390012 + lincRNA NOVEL OTTHUMG00000151845.1 16895 604 2 ENSG00000225842.1 AC139712.1 chr2 52474073 52474411 - processed_pseudogene KNOWN OTTHUMG00000152475.1 339 339 1 ENSG00000236837.1 AC139712.4 chr2 52494688 52500752 - lincRNA NOVEL OTTHUMG00000152267.1 6065 639 4 ENSG00000127463.12 EMC1 chr1 19215664 19251552 - protein_coding KNOWN OTTHUMG00000002497.4 35889 10650 104 ENSG00000204993.3 AC139712.2 chr2 52570648 52572522 + processed_pseudogene KNOWN OTTHUMG00000151839.1 1875 1875 1 ENSG00000233083.1 FTH1P6 chr2 52629743 52630078 + processed_pseudogene KNOWN OTTHUMG00000151801.2 336 320 2 ENSG00000216054.2 AC019196.1 chr2 52679750 52679840 + miRNA NOVEL NA 91 91 1 ENSG00000264975.1 MIR4431 chr2 52702522 52702615 - miRNA KNOWN NA 94 94 1 ENSG00000228033.4 AC010967.2 chr2 52722677 52910020 - lincRNA NOVEL OTTHUMG00000152413.1 187344 489 9 ENSG00000232604.1 AC010967.3 chr2 52864235 52866631 + lincRNA NOVEL OTTHUMG00000152414.1 2397 333 2 ENSG00000232668.1 AC010967.1 chr2 52883243 52883455 + processed_pseudogene KNOWN OTTHUMG00000151802.1 213 213 1 ENSG00000276117.1 AC069157.2 chr2 53422419 53422506 + miRNA NOVEL NA 88 88 1 ENSG00000251942.1 SCARNA16 chr2 53470447 53470629 - scaRNA NOVEL NA 183 183 1 ENSG00000223897.1 AC069157.1 chr2 53486144 53486280 - processed_pseudogene KNOWN OTTHUMG00000151800.2 137 137 1 ENSG00000053372.4 MRTO4 chr1 19251539 19260128 + protein_coding KNOWN OTTHUMG00000002496.2 8590 2822 14 ENSG00000115239.20 GPR75-ASB3 chr2 53532672 53787610 - protein_coding KNOWN OTTHUMG00000184778.1 254939 6299 79 ENSG00000207456.1 RNU6-997P chr2 53570374 53570480 - snRNA KNOWN NA 107 107 1 ENSG00000270898.4 GPR75-ASB3 chr2 53670293 53860160 - protein_coding KNOWN OTTHUMG00000129279.11 189868 2340 30 ENSG00000143942.4 CHAC2 chr2 53767792 53775196 + protein_coding KNOWN OTTHUMG00000151824.1 7405 1321 3 ENSG00000068912.12 ERLEC1 chr2 53787044 53818819 + protein_coding KNOWN OTTHUMG00000129281.4 31776 2592 43 ENSG00000265452.1 MIR3682 chr2 53849122 53849205 - miRNA KNOWN NA 84 84 1 ENSG00000119737.5 GPR75 chr2 53852913 53859989 - protein_coding KNOWN OTTHUMG00000129280.2 7077 2115 2 ENSG00000068878.13 PSME4 chr2 53864067 53970840 - protein_coding KNOWN OTTHUMG00000151852.5 106774 10241 123 ENSG00000170634.11 ACYP2 chr2 53970838 54305300 + protein_coding KNOWN OTTHUMG00000129287.7 334463 4964 41 ENSG00000235937.1 AC008280.1 chr2 54029552 54030682 - processed_pseudogene KNOWN OTTHUMG00000151882.1 1131 412 2 ENSG00000211454.12 AKR7L chr1 19265982 19274194 - polymorphic_pseudogene KNOWN OTTHUMG00000002520.5 8213 2768 22 ENSG00000233266.1 HMGB1P31 chr2 54051334 54051760 + processed_pseudogene KNOWN OTTHUMG00000152407.1 427 427 1 ENSG00000241114.1 AC008280.3 chr2 54079974 54080280 - processed_pseudogene KNOWN OTTHUMG00000152406.1 307 307 1 ENSG00000272156.1 RP11-477N3.1 chr2 54082554 54085066 + lincRNA NOVEL OTTHUMG00000185585.1 2513 732 2 ENSG00000252934.1 RNU7-172P chr2 54166944 54167007 - snRNA KNOWN NA 64 64 1 ENSG00000178021.10 TSPYL6 chr2 54253184 54256272 - protein_coding KNOWN OTTHUMG00000151823.3 3089 3089 1 ENSG00000177994.14 C2orf73 chr2 54330034 54383742 + protein_coding KNOWN OTTHUMG00000151826.6 53709 2716 38 ENSG00000115306.14 SPTBN1 chr2 54456285 54671445 + protein_coding KNOWN OTTHUMG00000133746.5 215161 18504 131 ENSG00000228108.1 AC092839.3 chr2 54516048 54540697 - antisense NOVEL OTTHUMG00000152417.2 24650 536 4 ENSG00000237887.1 AC092839.1 chr2 54529343 54529801 + processed_pseudogene KNOWN OTTHUMG00000152036.2 459 459 1 ENSG00000234943.2 AC092839.4 chr2 54545368 54546677 - antisense NOVEL OTTHUMG00000152418.2 1310 377 2 ENSG00000162482.4 AKR7A3 chr1 19282558 19289250 - protein_coding KNOWN OTTHUMG00000002523.1 6693 1710 7 ENSG00000274648.1 AC093110.1 chr2 54579018 54579119 + miRNA NOVEL NA 102 102 1 ENSG00000238018.2 AC093110.3 chr2 54661011 54680045 - antisense NOVEL OTTHUMG00000152506.2 19035 1236 6 ENSG00000214595.10 EML6 chr2 54723499 54972025 + protein_coding KNOWN OTTHUMG00000152035.10 248527 14426 81 ENSG00000231334.1 AC104781.1 chr2 54747103 54748404 - antisense NOVEL OTTHUMG00000152469.1 1302 397 2 ENSG00000252507.1 RNU7-81P chr2 54850289 54850352 + snRNA KNOWN NA 64 64 1 ENSG00000115310.16 RTN4 chr2 54972187 55112621 - protein_coding KNOWN OTTHUMG00000129337.7 140435 6644 98 ENSG00000200086.1 RNU6-433P chr2 55014418 55014521 - snRNA KNOWN NA 104 104 1 ENSG00000266376.1 AC093165.1 chr2 55108710 55108803 + miRNA NOVEL NA 94 94 1 ENSG00000162994.14 CLHC1 chr2 55174791 55232563 - protein_coding KNOWN OTTHUMG00000151918.7 57773 4398 71 ENSG00000203327.2 AC012358.7 chr2 55214387 55216126 - antisense NOVEL OTTHUMG00000152548.1 1740 916 2 ENSG00000270728.1 RP4-657E11.10 chr1 19297080 19297903 + processed_pseudogene KNOWN OTTHUMG00000184272.1 824 525 2 ENSG00000227799.1 AC012358.4 chr2 55224280 55225908 + processed_pseudogene KNOWN OTTHUMG00000151917.2 1629 1434 2 ENSG00000143947.11 RPS27A chr2 55231903 55235853 + protein_coding KNOWN OTTHUMG00000151919.17 3951 3130 41 ENSG00000085760.13 MTIF2 chr2 55236595 55269347 - protein_coding KNOWN OTTHUMG00000129338.22 32753 3374 82 ENSG00000162997.14 PRORSD1P chr2 55282319 55284522 + unitary_pseudogene KNOWN OTTHUMG00000176755.1 2204 2204 5 ENSG00000240401.7 AC012358.8 chr2 55282350 55346049 + antisense NOVEL OTTHUMG00000152491.7 63700 4741 82 ENSG00000206964.1 Y_RNA chr2 55286018 55286128 + misc_RNA NOVEL NA 111 111 1 ENSG00000115355.14 CCDC88A chr2 55287842 55419921 - protein_coding KNOWN OTTHUMG00000151915.8 132080 14537 219 ENSG00000233594.2 BTF3P5 chr2 55435156 55435622 - processed_pseudogene KNOWN OTTHUMG00000152119.2 467 467 1 ENSG00000238619.1 RNU6-775P chr2 55451004 55451099 - snRNA KNOWN NA 96 96 1 ENSG00000238493.1 RNU6-221P chr2 55456106 55456204 - snRNA KNOWN NA 99 99 1 ENSG00000230368.2 FAM41C chr1 868071 876903 - lincRNA KNOWN OTTHUMG00000002469.1 8833 1971 10 ENSG00000053371.11 AKR7A2 chr1 19303965 19312146 - protein_coding KNOWN OTTHUMG00000002522.2 8182 1781 26 ENSG00000264849.1 AC019198.1 chr2 55472744 55472841 + miRNA NOVEL NA 98 98 1 ENSG00000239189.1 RNU6-634P chr2 55499950 55500055 + snRNA KNOWN NA 106 106 1 ENSG00000163001.10 CFAP36 chr2 55519604 55545879 + protein_coding KNOWN OTTHUMG00000129339.7 26276 3505 53 ENSG00000275052.3 SMEK2 chr2 55547292 55618880 - protein_coding KNOWN OTTHUMG00000129336.7 71589 8217 57 ENSG00000212175.1 SNORA12 chr2 55565703 55565850 + snoRNA NOVEL NA 148 148 1 ENSG00000272606.1 RP11-554J4.1 chr2 55617909 55618373 + antisense NOVEL OTTHUMG00000185926.1 465 465 1 ENSG00000138035.13 PNPT1 chr2 55634265 55693910 - protein_coding KNOWN OTTHUMG00000129335.7 59646 5134 109 ENSG00000115380.17 EFEMP1 chr2 55865967 55924139 - protein_coding KNOWN OTTHUMG00000129343.4 58173 3962 67 ENSG00000202344.1 RN7SKP208 chr2 55951654 55952014 - misc_RNA KNOWN NA 361 361 1 ENSG00000272180.1 RP11-481J13.1 chr2 55952158 56181652 + lincRNA NOVEL OTTHUMG00000185572.1 229495 1275 7 ENSG00000200403.1 RNU6-1099P chr1 19305076 19305182 - snRNA KNOWN NA 107 107 1 ENSG00000226702.1 MIR217HG chr2 55963191 56047326 - lincRNA NOVEL OTTHUMG00000152029.1 84136 900 3 ENSG00000207548.2 MIR217 chr2 55982952 55983063 - miRNA KNOWN NA 112 112 1 ENSG00000207798.1 MIR216A chr2 55988950 55989059 - miRNA KNOWN NA 110 110 1 ENSG00000211520.2 MIR216B chr2 56000714 56000795 - miRNA KNOWN NA 82 82 1 ENSG00000229805.1 AC011306.1 chr2 56077417 56090382 - lincRNA NOVEL OTTHUMG00000152028.1 12966 712 2 ENSG00000271894.1 RP11-482H16.1 chr2 56147630 56386171 + processed_transcript NOVEL OTTHUMG00000185573.1 238542 2289 4 ENSG00000233251.6 AC007743.1 chr2 56173534 56185770 - antisense NOVEL OTTHUMG00000152032.2 12237 3713 10 ENSG00000055813.5 CCDC85A chr2 56184123 56386173 + protein_coding KNOWN OTTHUMG00000152033.3 202051 3982 6 ENSG00000199395.1 RNA5SP93 chr2 56235217 56235330 - rRNA KNOWN NA 114 114 1 ENSG00000231570.1 AC008173.1 chr2 56750300 56750563 + processed_pseudogene KNOWN OTTHUMG00000152045.1 264 264 1 ENSG00000040487.11 PQLC2 chr1 19312326 19329300 + protein_coding KNOWN OTTHUMG00000002521.7 16975 2686 46 ENSG00000271115.1 RP11-443I9.1 chr2 57048350 57049336 - processed_pseudogene KNOWN OTTHUMG00000184447.1 987 987 1 ENSG00000276201.1 AC009406.1 chr2 57192736 57192803 - miRNA NOVEL NA 68 68 1 ENSG00000277884.1 AC009406.2 chr2 57193499 57193566 - miRNA NOVEL NA 68 68 1 ENSG00000270569.1 RP11-127H13.1 chr2 57429548 57430693 - processed_pseudogene KNOWN OTTHUMG00000184449.1 1146 379 3 ENSG00000212168.1 SNORD78 chr2 57544535 57544599 + snoRNA NOVEL NA 65 65 1 ENSG00000271615.1 CTD-2026C7.1 chr2 57755428 57766052 + transcribed_processed_pseudogene KNOWN OTTHUMG00000184337.1 10625 1701 3 ENSG00000028116.15 VRK2 chr2 57907651 58159920 + protein_coding KNOWN OTTHUMG00000129348.5 252270 3509 99 ENSG00000251738.1 AC073215.1 chr2 58062581 58062665 - miRNA NOVEL NA 85 85 1 ENSG00000115392.10 FANCL chr2 58159243 58241372 - protein_coding KNOWN OTTHUMG00000129349.5 82130 2412 91 ENSG00000273063.1 RP11-334G22.1 chr2 58241349 58241686 + antisense NOVEL OTTHUMG00000185927.1 338 338 1 ENSG00000077549.16 CAPZB chr1 19338776 19485539 - protein_coding KNOWN OTTHUMG00000002556.5 146764 3238 64 ENSG00000233426.3 EIF3FP3 chr2 58251440 58252525 + processed_pseudogene KNOWN OTTHUMG00000152112.1 1086 1086 1 ENSG00000225226.1 AC007250.4 chr2 58275877 58296548 + lincRNA NOVEL OTTHUMG00000152120.1 20672 813 3 ENSG00000233723.6 LINC01122 chr2 58427799 59063766 + lincRNA NOVEL OTTHUMG00000152613.4 635968 5536 53 ENSG00000231043.3 AC007238.1 chr2 58460292 58462032 - processed_pseudogene KNOWN OTTHUMG00000152125.1 1741 1741 1 ENSG00000274548.1 AC007367.1 chr2 58527842 58527903 + miRNA NOVEL NA 62 62 1 ENSG00000222030.1 AC007131.1 chr2 59217708 59279400 + lincRNA NOVEL OTTHUMG00000152615.2 61693 2036 3 ENSG00000271955.1 RP11-444A22.1 chr2 59218680 60100200 - lincRNA NOVEL OTTHUMG00000185541.1 881521 478 4 ENSG00000233891.6 AC007131.2 chr2 59238714 59733396 - lincRNA NOVEL OTTHUMG00000152614.6 494683 2437 25 ENSG00000221653.1 AC007131.3 chr2 59241621 59241702 - miRNA NOVEL NA 82 82 1 ENSG00000231815.1 AC007179.1 chr2 59435213 59442261 + lincRNA NOVEL OTTHUMG00000152616.1 7049 438 3 ENSG00000240490.3 RN7SL277P chr1 19424384 19424671 + misc_RNA KNOWN NA 288 288 1 ENSG00000270447.1 RP11-569H17.1 chr2 59514890 59515124 + processed_pseudogene KNOWN OTTHUMG00000184336.1 235 235 1 ENSG00000252455.2 AC007179.2 chr2 59532984 59533075 - miRNA NOVEL NA 92 92 1 ENSG00000275742.1 AC007006.1 chr2 59565835 59565921 + miRNA NOVEL NA 87 87 1 ENSG00000200101.1 RNU6-508P chr2 59647621 59647723 + snRNA KNOWN NA 103 103 1 ENSG00000252726.1 RNA5SP94 chr2 59694762 59694869 + rRNA KNOWN NA 108 108 1 ENSG00000228590.1 AC007381.3 chr2 60350595 60353016 - lincRNA NOVEL OTTHUMG00000152619.1 2422 2005 2 ENSG00000223929.1 AC007381.2 chr2 60359216 60391375 - lincRNA NOVEL OTTHUMG00000152618.1 32160 1044 6 ENSG00000200807.1 RNU1-32P chr2 60384605 60384763 + snRNA KNOWN NA 159 159 1 ENSG00000266078.1 MIR4432 chr2 60387362 60387445 - miRNA KNOWN NA 84 84 1 ENSG00000276812.1 AC007381.1 chr2 60417838 60417905 - miRNA NOVEL NA 68 68 1 ENSG00000201609.1 RNU4-28P chr1 19510593 19510733 + snRNA KNOWN NA 141 141 1 ENSG00000119866.19 BCL11A chr2 60451167 60553567 - protein_coding KNOWN OTTHUMG00000129420.6 102401 8059 37 ENSG00000233953.1 AC009970.1 chr2 60495686 60499964 + antisense NOVEL OTTHUMG00000152622.1 4279 432 3 ENSG00000242158.3 RN7SL361P chr2 60640705 60641002 + misc_RNA KNOWN NA 298 298 1 ENSG00000271134.1 RP11-416L21.2 chr2 60682873 60683244 - processed_pseudogene KNOWN OTTHUMG00000184451.1 372 372 1 ENSG00000213495.3 RP11-416L21.1 chr2 60711484 60711920 + processed_pseudogene KNOWN OTTHUMG00000157061.1 437 437 1 ENSG00000252718.1 RNU6-612P chr2 60719640 60719741 + snRNA KNOWN NA 102 102 1 ENSG00000271707.1 ATP1B3P1 chr2 60734895 60735715 - processed_pseudogene KNOWN OTTHUMG00000184452.1 821 821 1 ENSG00000115421.11 PAPOLG chr2 60756230 60802085 + protein_coding KNOWN OTTHUMG00000129419.5 45856 8501 102 ENSG00000228414.5 LINC01185 chr2 60825132 60881314 - lincRNA NOVEL OTTHUMG00000152126.3 56183 2029 7 ENSG00000241524.3 RN7SL632P chr2 60831664 60831929 - misc_RNA KNOWN NA 266 266 1 ENSG00000235185.1 RP5-1056L3.1 chr1 19591802 19596832 - antisense NOVEL OTTHUMG00000002711.1 5031 207 2 ENSG00000237024.1 RPL21P33 chr2 60852260 60852743 + processed_pseudogene KNOWN OTTHUMG00000152167.1 484 484 1 ENSG00000162924.12 REL chr2 60881521 60931610 + protein_coding KNOWN OTTHUMG00000129418.3 50090 11255 21 ENSG00000201076.1 RNU4-51P chr2 60911303 60911442 + snRNA KNOWN NA 140 140 1 ENSG00000267520.2 RP11-373L24.1 chr2 60925909 60931610 + 3prime_overlapping_ncrna NOVEL OTTHUMG00000179927.2 5702 5702 1 ENSG00000237522.1 NONOP2 chr2 60936819 60938049 - processed_pseudogene KNOWN OTTHUMG00000155384.1 1231 1231 1 ENSG00000232713.2 AC010733.5 chr2 60938204 60938604 - processed_pseudogene KNOWN OTTHUMG00000152127.4 401 401 1 ENSG00000162927.12 PUS10 chr2 60940222 61018259 - protein_coding KNOWN OTTHUMG00000129423.7 78038 7651 62 ENSG00000222251.1 RNA5SP95 chr2 60998752 60998888 + rRNA KNOWN NA 137 137 1 ENSG00000162928.8 PEX13 chr2 61017225 61051990 + protein_coding KNOWN OTTHUMG00000129422.7 34766 5910 13 ENSG00000162929.12 KIAA1841 chr2 61065871 61138034 + protein_coding KNOWN OTTHUMG00000187089.1 72164 7992 147 ENSG00000173436.12 MINOS1 chr1 19596977 19629821 + protein_coding KNOWN OTTHUMG00000002712.2 32845 5227 39 ENSG00000274769.1 RP11-493E12.3 chr2 61115787 61164825 + processed_transcript NOVEL OTTHUMG00000129421.9 49039 1383 8 ENSG00000212978.6 AC016747.3 chr2 61141592 61144969 - processed_transcript NOVEL OTTHUMG00000152156.5 3378 3109 9 ENSG00000237651.5 C2orf74 chr2 61145068 61164829 + protein_coding KNOWN OTTHUMG00000187090.2 19762 1515 25 ENSG00000271889.1 RP11-493E12.1 chr2 61151433 61162105 - lincRNA NOVEL OTTHUMG00000185543.1 10673 884 6 ENSG00000173209.21 AHSA2 chr2 61177418 61191203 + protein_coding KNOWN OTTHUMG00000129437.8 13786 8382 53 ENSG00000280672.1 AC016747.1 chr2 61177554 61177636 + miRNA NOVEL NA 83 83 1 ENSG00000115464.13 USP34 chr2 61187463 61470769 - protein_coding KNOWN OTTHUMG00000152265.9 283307 18125 236 ENSG00000273302.1 RP11-493E12.2 chr2 61199979 61200769 + sense_intronic NOVEL OTTHUMG00000185935.1 791 791 1 ENSG00000271146.1 RP11-479F13.1 chr2 61249780 61250621 + processed_pseudogene KNOWN OTTHUMG00000184334.1 842 397 3 ENSG00000234624.2 AC016894.1 chr2 61416887 61417197 - processed_pseudogene KNOWN OTTHUMG00000152266.2 311 311 1 ENSG00000270136.4 MINOS1-NBL1 chr1 19596979 19658056 + protein_coding KNOWN OTTHUMG00000183956.2 61078 2493 28 ENSG00000206937.1 SNORA70B chr2 61417244 61417378 - snoRNA KNOWN NA 135 135 1 ENSG00000270820.4 RP11-355B11.2 chr2 61471188 61484130 + antisense NOVEL OTTHUMG00000185251.1 12943 1963 13 ENSG00000082898.15 XPO1 chr2 61477849 61538626 - protein_coding KNOWN OTTHUMG00000152316.22 60778 11708 182 ENSG00000266768.1 AC016727.1 chr2 61555360 61555458 + miRNA NOVEL NA 99 99 1 ENSG00000271243.1 RP11-355B11.1 chr2 61575774 61576394 + processed_pseudogene KNOWN OTTHUMG00000184510.1 621 621 1 ENSG00000226884.1 AC016727.3 chr2 61589498 61589663 - processed_pseudogene KNOWN OTTHUMG00000152362.2 166 166 1 ENSG00000206973.1 RNU6-1145P chr2 61605616 61605722 + snRNA KNOWN NA 107 107 1 ENSG00000213486.3 AC108039.1 chr2 61710076 61710978 - processed_pseudogene KNOWN OTTHUMG00000152379.1 903 609 2 ENSG00000227361.1 RPS24P7 chr2 61803143 61803388 + processed_pseudogene KNOWN OTTHUMG00000153265.1 246 246 1 ENSG00000229831.2 AC108039.3 chr2 61820208 61820566 + processed_pseudogene KNOWN OTTHUMG00000153264.1 359 359 1 ENSG00000226396.1 RP5-1056L3.3 chr1 19608114 19608568 + processed_pseudogene KNOWN OTTHUMG00000002695.2 455 455 1 ENSG00000170264.11 FAM161A chr2 61824854 61854143 - protein_coding KNOWN OTTHUMG00000152165.7 29290 5252 36 ENSG00000230702.1 RP11-681L4.1 chr2 61856695 61857055 + processed_pseudogene KNOWN OTTHUMG00000157062.1 361 361 1 ENSG00000277498.1 RP11-681L4.2 chr2 61858137 61860298 + unprocessed_pseudogene KNOWN OTTHUMG00000187528.1 2162 2034 2 ENSG00000115484.13 CCT4 chr2 61868089 61888804 - protein_coding KNOWN OTTHUMG00000152166.4 20716 2830 33 ENSG00000236498.1 AC107081.5 chr2 61868432 61886082 + antisense NOVEL OTTHUMG00000152650.1 17651 802 2 ENSG00000173163.9 COMMD1 chr2 61888724 62147247 + protein_coding KNOWN OTTHUMG00000129445.3 258524 2392 23 ENSG00000278523.1 Y_RNA chr2 61928634 61928704 - misc_RNA NOVEL NA 71 71 1 ENSG00000280544.1 AC107081.1 chr2 61929691 61930719 - protein_coding NOVEL NA 1029 129 4 ENSG00000229839.5 AC018462.2 chr2 62069447 62146881 - antisense NOVEL OTTHUMG00000152512.3 77435 1836 14 ENSG00000242735.1 AC018462.3 chr2 62146413 62147153 + processed_pseudogene KNOWN OTTHUMG00000152513.1 741 741 1 ENSG00000234711.1 TUBB8P11 chr1 873292 874349 + unprocessed_pseudogene KNOWN OTTHUMG00000002470.2 1058 1058 1 ENSG00000158747.12 NBL1 chr1 19640554 19658456 + protein_coding KNOWN OTTHUMG00000002700.6 17903 3465 51 ENSG00000271657.1 RP11-270B14.1 chr2 62168862 62171163 + processed_pseudogene KNOWN OTTHUMG00000184329.1 2302 395 2 ENSG00000170340.10 B3GNT2 chr2 62196113 62224731 + protein_coding KNOWN OTTHUMG00000129444.2 28619 2861 4 ENSG00000266097.1 MIR5192 chr2 62205826 62205917 + miRNA KNOWN NA 92 92 1 ENSG00000239958.3 RN7SL51P chr2 62262387 62262671 - misc_RNA KNOWN NA 285 285 1 ENSG00000270335.1 RP11-642D6.1 chr2 62348948 62350739 - processed_pseudogene KNOWN OTTHUMG00000184492.1 1792 636 2 ENSG00000228541.1 AC093159.1 chr2 62463127 62464070 + lincRNA NOVEL OTTHUMG00000152523.1 944 424 2 ENSG00000241625.3 RN7SL18P chr2 62491178 62491468 + misc_RNA KNOWN NA 291 291 1 ENSG00000186889.8 TMEM17 chr2 62500221 62511894 - protein_coding KNOWN OTTHUMG00000129455.3 11674 2982 10 ENSG00000233702.1 AC107083.1 chr2 62507545 62507823 - processed_pseudogene KNOWN OTTHUMG00000152515.1 279 279 1 ENSG00000229503.1 AC092155.1 chr2 62532583 62533059 - processed_pseudogene KNOWN OTTHUMG00000152517.2 477 477 1 ENSG00000158748.3 HTR6 chr1 19665287 19679562 + protein_coding KNOWN OTTHUMG00000002713.1 14276 1984 3 ENSG00000232144.1 PSAT1P2 chr2 62552463 62553434 - processed_pseudogene KNOWN OTTHUMG00000152522.1 972 972 1 ENSG00000230595.1 RSL24D1P2 chr2 62561058 62561423 - processed_pseudogene KNOWN OTTHUMG00000152521.1 366 366 1 ENSG00000226622.4 AC092155.4 chr2 62590255 62662654 - antisense NOVEL OTTHUMG00000152520.1 72400 1281 12 ENSG00000115504.13 EHBP1 chr2 62673851 63046487 + protein_coding KNOWN OTTHUMG00000129453.5 372637 8219 170 ENSG00000252436.1 Y_RNA chr2 62726636 62726740 - misc_RNA NOVEL NA 105 105 1 ENSG00000226605.1 AC007098.1 chr2 62826064 62858438 - antisense NOVEL OTTHUMG00000152544.1 32375 251 2 ENSG00000237162.1 RP11-443F16.1 chr2 62939916 62940282 + processed_pseudogene KNOWN OTTHUMG00000157069.1 367 367 1 ENSG00000231609.4 AC009501.4 chr2 63043922 63048640 - antisense NOVEL OTTHUMG00000152553.1 4719 2324 14 ENSG00000115507.8 OTX1 chr2 63050057 63057836 + protein_coding KNOWN OTTHUMG00000129454.3 7780 4833 22 ENSG00000270437.1 RP11-511I11.2 chr2 63083008 63087322 + processed_pseudogene KNOWN OTTHUMG00000184327.1 4315 1352 2 ENSG00000162542.12 TMCO4 chr1 19682213 19799945 - protein_coding KNOWN OTTHUMG00000002697.1 117733 4054 64 ENSG00000232403.1 RP11-511I11.1 chr2 63108118 63108429 - processed_pseudogene KNOWN OTTHUMG00000157070.1 312 312 1 ENSG00000242412.1 DBIL5P2 chr2 63117851 63119542 - transcribed_processed_pseudogene KNOWN OTTHUMG00000152565.1 1692 1692 2 ENSG00000143951.14 WDPCP chr2 63121383 63827843 - protein_coding KNOWN OTTHUMG00000152566.7 706461 11776 143 ENSG00000233716.1 AC074367.1 chr2 63232453 63233577 - processed_pseudogene KNOWN OTTHUMG00000152607.1 1125 1125 1 ENSG00000279485.1 RP11-391A7.1 chr2 63517892 63519268 - TEC KNOWN OTTHUMG00000186570.1 1377 1377 1 ENSG00000014641.16 MDH1 chr2 63588609 63607197 + protein_coding KNOWN OTTHUMG00000129512.11 18589 4990 78 ENSG00000281071.1 AC016734.1 chr2 63609247 63610211 - protein_coding NOVEL NA 965 45 3 ENSG00000228305.2 AC016734.2 chr2 63622178 63622831 - processed_pseudogene KNOWN OTTHUMG00000152582.1 654 654 1 ENSG00000229920.2 RPS4XP5 chr2 63642455 63644038 - transcribed_processed_pseudogene KNOWN OTTHUMG00000152611.2 1584 1584 2 ENSG00000234488.1 AC096664.1 chr2 63684305 63684710 + processed_pseudogene KNOWN OTTHUMG00000152612.1 406 406 1 ENSG00000178828.6 RNF186 chr1 19814029 19815278 - protein_coding KNOWN OTTHUMG00000002709.1 1250 1250 1 ENSG00000221085.1 AC096664.3 chr2 63695393 63695535 - miRNA NOVEL NA 143 143 1 ENSG00000228872.2 AC096664.2 chr2 63717122 63717899 + processed_pseudogene KNOWN OTTHUMG00000152610.1 778 778 1 ENSG00000229221.1 HNRNPA1P66 chr2 63751697 63752630 - processed_pseudogene KNOWN OTTHUMG00000152609.1 934 934 1 ENSG00000169764.13 UGP2 chr2 63840940 63891562 + protein_coding KNOWN OTTHUMG00000129513.7 50623 6495 176 ENSG00000251775.1 ACA59 chr2 63883249 63883391 - snoRNA NOVEL NA 143 143 1 ENSG00000143952.18 VPS54 chr2 63892146 64019072 - protein_coding KNOWN OTTHUMG00000152627.2 126927 5091 76 ENSG00000228079.2 AC012368.1 chr2 64086353 64088246 - lincRNA NOVEL OTTHUMG00000152631.2 1894 560 2 ENSG00000197329.10 PELI1 chr2 64092652 64144454 - protein_coding KNOWN OTTHUMG00000129511.3 51803 4125 18 ENSG00000225889.6 AC074289.1 chr2 64143239 64252859 + antisense NOVEL OTTHUMG00000152632.5 109621 2453 25 ENSG00000230923.1 LINC00309 chr2 64185078 64205485 - lincRNA NOVEL OTTHUMG00000152633.1 20408 3307 6 ENSG00000235434.1 RP11-91K11.2 chr1 19814367 19819502 + antisense NOVEL OTTHUMG00000002710.1 5136 447 2 ENSG00000270354.1 RP11-547M24.1 chr2 64208498 64208716 - processed_pseudogene KNOWN OTTHUMG00000184494.1 219 219 1 ENSG00000277960.1 AC074289.2 chr2 64252900 64252967 - miRNA NOVEL NA 68 68 1 ENSG00000238012.1 AC114752.1 chr2 64330486 64332131 - lincRNA NOVEL OTTHUMG00000152671.1 1646 289 2 ENSG00000238201.1 AC114752.3 chr2 64338067 64341647 - lincRNA NOVEL OTTHUMG00000152672.1 3581 404 2 ENSG00000264297.2 MIR4433B chr2 64340747 64340848 - miRNA KNOWN NA 102 102 1 ENSG00000236148.5 AC114752.2 chr2 64347193 64347741 - processed_pseudogene KNOWN OTTHUMG00000152669.1 549 549 1 ENSG00000223935.1 AC008074.3 chr2 64395220 64453798 - antisense NOVEL OTTHUMG00000152670.1 58579 723 4 ENSG00000237217.1 AC008074.5 chr2 64450096 64450524 + processed_pseudogene KNOWN OTTHUMG00000152675.1 429 429 1 ENSG00000119862.11 LGALSL chr2 64453969 64461381 + protein_coding KNOWN OTTHUMG00000129541.5 7413 4003 22 ENSG00000223863.1 AC008074.4 chr2 64486353 64500904 + lincRNA NOVEL OTTHUMG00000152676.1 14552 572 3 ENSG00000169914.5 OTUD3 chr1 19882513 19912945 + protein_coding KNOWN OTTHUMG00000002696.1 30433 6767 13 ENSG00000260101.1 RP11-568N6.1 chr2 64522187 64524093 - lincRNA NOVEL OTTHUMG00000175896.1 1907 1907 1 ENSG00000119844.13 AFTPH chr2 64524305 64593005 + protein_coding KNOWN OTTHUMG00000129539.2 68701 5767 56 ENSG00000279644.1 AC008074.1 chr2 64552771 64592133 - protein_coding KNOWN NA 39363 1622 9 ENSG00000252414.1 RNU6-100P chr2 64578892 64578997 + snRNA KNOWN NA 106 106 1 ENSG00000233694.4 AC007365.1 chr2 64606975 64616482 + lincRNA NOVEL OTTHUMG00000152679.1 9508 1929 8 ENSG00000179833.4 SERTAD2 chr2 64631621 64751005 - protein_coding KNOWN OTTHUMG00000152678.3 119385 6274 5 ENSG00000226756.1 AC007365.3 chr2 64644612 64646698 + lincRNA NOVEL OTTHUMG00000152702.1 2087 627 2 ENSG00000227791.3 AC007365.4 chr2 64665607 64666064 + processed_pseudogene KNOWN OTTHUMG00000152701.2 458 458 1 ENSG00000253082.1 AC007365.2 chr2 64776104 64776187 + miRNA NOVEL NA 84 84 1 ENSG00000275588.1 Metazoa_SRP chr2 64817378 64817675 + misc_RNA NOVEL NA 298 298 1 ENSG00000188784.4 PLA2G2E chr1 19920009 19923617 - protein_coding KNOWN OTTHUMG00000002702.1 3609 785 4 ENSG00000280945.1 AC007880.2 chr2 64817586 64817668 + miRNA NOVEL NA 83 83 1 ENSG00000199964.1 Y_RNA chr2 64834056 64834157 - misc_RNA NOVEL NA 102 102 1 ENSG00000234572.1 AC007880.1 chr2 64846130 64863626 - lincRNA NOVEL OTTHUMG00000152703.1 17497 1977 5 ENSG00000237638.1 AC007386.2 chr2 64901840 64905137 - lincRNA NOVEL OTTHUMG00000152704.1 3298 2928 2 ENSG00000244534.3 RN7SL211P chr2 64906863 64907138 - misc_RNA KNOWN NA 276 276 1 ENSG00000227394.1 AC007386.3 chr2 64960053 64960634 - processed_pseudogene KNOWN OTTHUMG00000152700.1 582 582 1 ENSG00000115902.9 SLC1A4 chr2 64988477 65023865 + protein_coding KNOWN OTTHUMG00000129537.3 35389 6939 33 ENSG00000252892.1 RNU6-548P chr2 64994746 64994860 + snRNA KNOWN NA 115 115 1 ENSG00000232613.5 AC007386.4 chr2 65030727 65053017 + antisense NOVEL OTTHUMG00000152699.3 22291 1133 6 ENSG00000011523.12 CEP68 chr2 65056366 65087004 + protein_coding KNOWN OTTHUMG00000129538.3 30639 8623 23 ENSG00000242688.3 RN7SL304P chr1 19970969 19971269 + misc_RNA KNOWN NA 301 301 1 ENSG00000138069.15 RAB1A chr2 65070701 65130106 - protein_coding KNOWN OTTHUMG00000152725.1 59406 2951 22 ENSG00000272025.1 SNORA74 chr2 65158662 65158860 + snoRNA NOVEL NA 199 199 1 ENSG00000273763.1 RP11-420C9.1 chr2 65203571 65203813 - processed_pseudogene KNOWN OTTHUMG00000187530.1 243 243 1 ENSG00000172974.11 AC007318.5 chr2 65205108 65205988 + processed_pseudogene KNOWN OTTHUMG00000152724.2 881 881 1 ENSG00000138071.12 ACTR2 chr2 65227753 65271253 + protein_coding KNOWN OTTHUMG00000129540.2 43501 4347 36 ENSG00000198369.8 SPRED2 chr2 65310851 65432637 - protein_coding KNOWN OTTHUMG00000152737.4 121787 5154 37 ENSG00000232693.2 AC012370.2 chr2 65373700 65380685 - sense_intronic NOVEL OTTHUMG00000152757.2 6986 530 4 ENSG00000204929.10 AC074391.1 chr2 65436711 66084639 + lincRNA NOVEL OTTHUMG00000152768.6 647929 3676 32 ENSG00000234255.7 AC012370.3 chr2 65439888 65456571 - lincRNA NOVEL OTTHUMG00000152758.6 16684 2522 32 ENSG00000237979.1 AC007389.1 chr2 65500993 65502138 - processed_pseudogene KNOWN OTTHUMG00000152798.1 1146 793 2 ENSG00000188257.9 PLA2G2A chr1 19975431 19980416 - protein_coding KNOWN OTTHUMG00000002699.2 4986 1685 33 ENSG00000223739.1 AC007389.2 chr2 65511771 65512076 - processed_pseudogene KNOWN OTTHUMG00000152795.1 306 306 1 ENSG00000243029.3 RN7SL635P chr2 65545401 65545696 - misc_RNA KNOWN NA 296 296 1 ENSG00000251900.1 VTRNA2-2P chr2 65555432 65555534 - misc_RNA KNOWN NA 103 103 1 ENSG00000235725.1 AC007389.3 chr2 65589566 65640177 - lincRNA NOVEL OTTHUMG00000152797.1 50612 1656 4 ENSG00000281920.1 RP11-418H16.1 chr2 65623272 65628424 + lincRNA NOVEL OTTHUMG00000189703.1 5153 744 3 ENSG00000214533.3 KRT18P33 chr2 65666695 65667737 + processed_pseudogene KNOWN OTTHUMG00000152796.1 1043 1043 1 ENSG00000265899.1 AC007389.4 chr2 65667256 65667346 + miRNA NOVEL NA 91 91 1 ENSG00000272177.1 RP11-340F16.1 chr2 65731676 65733041 + lincRNA NOVEL OTTHUMG00000185630.1 1366 424 2 ENSG00000280257.1 RP11-340F16.2 chr2 65790039 65793533 + TEC KNOWN OTTHUMG00000185631.1 3495 3495 1 ENSG00000221524.1 AC074391.2 chr2 66041250 66041390 + miRNA NOVEL NA 141 141 1 ENSG00000127472.9 PLA2G5 chr1 20028179 20091190 + protein_coding KNOWN OTTHUMG00000002698.3 63012 2607 56 ENSG00000227293.1 AC118345.1 chr2 66235377 66236213 - lincRNA NOVEL OTTHUMG00000152909.1 837 366 2 ENSG00000225815.2 AC092669.6 chr2 66327349 66328984 + lincRNA NOVEL OTTHUMG00000152908.1 1636 1228 5 ENSG00000264525.1 MIR4778 chr2 66358249 66358328 - miRNA KNOWN NA 80 80 1 ENSG00000232164.1 AC092669.3 chr2 66383306 66392450 + lincRNA NOVEL OTTHUMG00000152809.2 9145 1679 3 ENSG00000226819.1 MEIS1-AS3 chr2 66426735 66433470 - antisense KNOWN OTTHUMG00000152832.2 6736 707 4 ENSG00000143995.18 MEIS1 chr2 66433452 66573869 + protein_coding KNOWN OTTHUMG00000150714.13 140418 10934 116 ENSG00000230749.4 MEIS1-AS2 chr2 66439088 66441836 - antisense KNOWN OTTHUMG00000152831.1 2749 1029 4 ENSG00000232046.5 AC007392.3 chr2 66574030 66730157 + lincRNA NOVEL OTTHUMG00000152838.2 156128 1607 22 ENSG00000237179.4 AC007392.4 chr2 66697125 66703227 - lincRNA NOVEL OTTHUMG00000152839.1 6103 765 8 ENSG00000224071.1 AC009474.1 chr2 66820684 66822570 - processed_pseudogene KNOWN OTTHUMG00000152855.1 1887 1565 2 ENSG00000272438.1 RP11-54O7.16 chr1 904834 915976 + lincRNA NOVEL OTTHUMG00000185550.1 11143 351 2 ENSG00000117215.13 PLA2G2D chr1 20111939 20119566 - protein_coding KNOWN OTTHUMG00000002701.1 7628 2681 7 ENSG00000230355.1 AC009474.2 chr2 66881087 66881222 - processed_pseudogene KNOWN OTTHUMG00000152854.1 136 136 1 ENSG00000230525.4 AC007403.2 chr2 66904436 66971462 + lincRNA NOVEL OTTHUMG00000152853.1 67027 824 8 ENSG00000232688.1 AC007403.1 chr2 66921510 66922457 - lincRNA NOVEL OTTHUMG00000152852.1 948 397 3 ENSG00000223859.1 AC007403.3 chr2 67040546 67041966 + lincRNA NOVEL OTTHUMG00000152857.1 1421 567 2 ENSG00000235885.6 AC023115.2 chr2 67086446 67311439 + lincRNA NOVEL OTTHUMG00000152865.5 224994 6480 57 ENSG00000236780.4 AC078941.1 chr2 67123357 67215319 - lincRNA NOVEL OTTHUMG00000152856.1 91963 2788 16 ENSG00000236605.1 AC023115.4 chr2 67324627 67325304 + lincRNA NOVEL OTTHUMG00000152879.1 678 574 2 ENSG00000143971.7 ETAA1 chr2 67397319 67410545 + protein_coding KNOWN OTTHUMG00000129545.2 13227 3486 8 ENSG00000224173.1 AC007422.1 chr2 67562067 67574044 + lincRNA NOVEL OTTHUMG00000152486.3 11978 1008 6 ENSG00000235495.1 AC010987.5 chr2 67565604 67684077 - lincRNA NOVEL OTTHUMG00000152562.1 118474 167 2 ENSG00000158786.4 PLA2G2F chr1 20139326 20150386 + protein_coding KNOWN OTTHUMG00000002704.1 11061 6440 7 ENSG00000237013.1 AC010987.6 chr2 67796054 67825562 - lincRNA NOVEL OTTHUMG00000152485.1 29509 725 3 ENSG00000235968.1 AC079112.1 chr2 68023694 68024766 - processed_pseudogene KNOWN OTTHUMG00000152560.1 1073 939 2 ENSG00000197223.10 C1D chr2 68041130 68110948 - protein_coding KNOWN OTTHUMG00000129564.7 69819 3581 31 ENSG00000243667.5 WDR92 chr2 68122936 68157560 - protein_coding KNOWN OTTHUMG00000152561.4 34625 4079 38 ENSG00000236259.1 AC017083.2 chr2 68125265 68125747 + processed_pseudogene KNOWN OTTHUMG00000152569.1 483 483 1 ENSG00000273398.4 HZGJ chr2 68130149 68261230 - protein_coding NOVEL OTTHUMG00000185937.1 131082 3395 31 ENSG00000115946.6 PNO1 chr2 68157844 68176238 + protein_coding KNOWN OTTHUMG00000129563.2 18395 2674 14 ENSG00000221823.9 PPP3R1 chr2 68178857 68256237 - protein_coding KNOWN OTTHUMG00000129561.8 77381 3363 18 ENSG00000273275.1 RP11-474G23.2 chr2 68179833 68180532 + antisense NOVEL OTTHUMG00000185954.1 700 700 1 ENSG00000273064.1 RP11-474G23.3 chr2 68252870 68253848 + antisense NOVEL OTTHUMG00000185957.2 979 979 1 ENSG00000227066.1 RP3-340N1.2 chr1 20154338 20160568 + lincRNA NOVEL OTTHUMG00000002703.1 6231 2639 4 ENSG00000221443.1 AC017083.1 chr2 68273104 68273206 + miRNA NOVEL NA 103 103 1 ENSG00000119865.7 CNRIP1 chr2 68284171 68320051 - protein_coding KNOWN OTTHUMG00000129565.4 35881 3548 13 ENSG00000203395.2 AC015969.3 chr2 68361214 68365584 - antisense NOVEL OTTHUMG00000152574.1 4371 1416 2 ENSG00000115956.9 PLEK chr2 68365173 68397453 + protein_coding KNOWN OTTHUMG00000129562.4 32281 3314 13 ENSG00000229462.1 AC127383.1 chr2 68445710 68449174 - unprocessed_pseudogene KNOWN OTTHUMG00000152584.2 3465 1800 3 ENSG00000204923.3 FBXO48 chr2 68459419 68467258 - protein_coding KNOWN OTTHUMG00000152585.2 7840 5666 4 ENSG00000169621.8 APLF chr2 68467561 68655862 + protein_coding KNOWN OTTHUMG00000129566.6 188302 7135 51 ENSG00000214525.4 AC130709.1 chr2 68528241 68529452 - processed_pseudogene KNOWN OTTHUMG00000152620.1 1212 1212 1 ENSG00000169618.6 PROKR1 chr2 68643589 68658247 + protein_coding KNOWN OTTHUMG00000129567.3 14659 4273 3 ENSG00000163219.10 ARHGAP25 chr2 68679601 68826833 + protein_coding KNOWN OTTHUMG00000152621.5 147233 5452 110 ENSG00000187980.6 PLA2G2C chr1 20161253 20177424 - protein_coding KNOWN OTTHUMG00000002705.4 16172 3298 9 ENSG00000237576.1 AC097495.2 chr2 68832044 68837724 + antisense NOVEL OTTHUMG00000152623.1 5681 683 4 ENSG00000228329.1 AC097495.3 chr2 68832816 68837192 - lincRNA NOVEL OTTHUMG00000152624.1 4377 1017 2 ENSG00000163217.1 BMP10 chr2 68865481 68871517 - protein_coding KNOWN OTTHUMG00000129573.1 6037 1584 2 ENSG00000183607.8 GKN2 chr2 68945232 68952970 - protein_coding KNOWN OTTHUMG00000152655.2 7739 1653 11 ENSG00000169605.5 GKN1 chr2 68974573 68980974 + protein_coding KNOWN OTTHUMG00000129574.2 6402 1149 9 ENSG00000169604.18 ANTXR1 chr2 69013178 69249327 + protein_coding KNOWN OTTHUMG00000129575.7 236150 8185 67 ENSG00000266649.1 MIR3126 chr2 69103682 69103755 + miRNA KNOWN NA 74 74 1 ENSG00000251850.1 RNA5SP96 chr2 69181897 69182003 - rRNA KNOWN NA 107 107 1 ENSG00000199460.2 RNU6-1216P chr2 69182877 69182983 + snRNA KNOWN NA 107 107 1 ENSG00000271597.1 RP11-85D18.1 chr2 69251818 69252364 - processed_pseudogene KNOWN OTTHUMG00000184496.1 547 547 1 ENSG00000225986.1 UBXN10-AS1 chr1 20184242 20186486 - antisense NOVEL OTTHUMG00000002706.1 2245 510 2 ENSG00000198380.11 GFPT1 chr2 69319769 69387254 - protein_coding KNOWN OTTHUMG00000152666.4 67486 8866 51 ENSG00000252250.1 Y_RNA chr2 69334600 69334692 + misc_RNA NOVEL NA 93 93 1 ENSG00000169599.11 NFU1 chr2 69395750 69437628 - protein_coding KNOWN OTTHUMG00000152668.5 41879 2197 63 ENSG00000115977.17 AAK1 chr2 69457997 69674349 - protein_coding KNOWN OTTHUMG00000129648.8 216353 23608 90 ENSG00000244236.3 RN7SL604P chr2 69516751 69517046 + misc_RNA KNOWN NA 296 296 1 ENSG00000281301.1 AC079121.1 chr2 69520040 69520115 - miRNA NOVEL NA 76 76 1 ENSG00000207016.1 SNORA36C chr2 69520043 69520174 - snoRNA KNOWN NA 132 132 1 ENSG00000232228.1 RP11-77O7.1 chr2 69594741 69595058 - processed_pseudogene KNOWN OTTHUMG00000157071.1 318 318 1 ENSG00000229948.2 B3GALNT1P1 chr2 69597353 69598951 + processed_pseudogene KNOWN OTTHUMG00000152687.2 1599 975 3 ENSG00000196975.13 ANXA4 chr2 69644425 69826464 + protein_coding KNOWN OTTHUMG00000129649.4 182040 9946 75 ENSG00000162543.5 UBXN10 chr1 20186085 20196048 + protein_coding KNOWN OTTHUMG00000002708.1 9964 5571 2 ENSG00000231024.1 AC092431.3 chr2 69700192 69713847 - lincRNA NOVEL OTTHUMG00000152688.1 13656 420 2 ENSG00000087338.4 GMCL1 chr2 69829642 69881396 + protein_coding KNOWN OTTHUMG00000129643.3 51755 4922 26 ENSG00000275381.1 RP11-401N16.2 chr2 69844509 69844933 - processed_pseudogene KNOWN OTTHUMG00000187532.1 425 425 1 ENSG00000270723.1 RP11-401N16.1 chr2 69873565 69873819 - processed_pseudogene KNOWN OTTHUMG00000184498.1 255 255 1 ENSG00000124380.9 SNRNP27 chr2 69893560 69905575 + protein_coding KNOWN OTTHUMG00000152689.2 12016 2275 24 ENSG00000059728.9 MXD1 chr2 69897688 69942945 + protein_coding KNOWN OTTHUMG00000129646.3 45258 6351 28 ENSG00000279229.1 AC019206.1 chr2 69902350 69902709 - protein_coding KNOWN NA 360 192 2 ENSG00000244617.2 ASPRV1 chr2 69960089 69962265 - protein_coding KNOWN OTTHUMG00000129647.5 2177 2177 1 ENSG00000179818.12 PCBP1-AS1 chr2 69962263 70103220 - processed_transcript NOVEL OTTHUMG00000153728.20 140958 19619 924 ENSG00000263669.2 RN7SL470P chr2 70075014 70075272 - misc_RNA KNOWN NA 259 259 1 ENSG00000228105.1 RP3-340N1.6 chr1 20243095 20244655 + lincRNA NOVEL OTTHUMG00000002707.2 1561 480 2 ENSG00000169564.6 PCBP1 chr2 70087454 70089203 + protein_coding KNOWN OTTHUMG00000129645.1 1750 1750 1 ENSG00000233060.1 AC016700.2 chr2 70089721 70096100 + lincRNA NOVEL OTTHUMG00000153127.1 6380 448 3 ENSG00000225392.1 AC016700.4 chr2 70102551 70102862 + processed_pseudogene KNOWN OTTHUMG00000153126.2 312 312 1 ENSG00000231327.1 AC016700.5 chr2 70124036 70125317 - lincRNA NOVEL OTTHUMG00000153133.1 1282 662 2 ENSG00000115998.6 C2orf42 chr2 70149880 70248615 - protein_coding KNOWN OTTHUMG00000129642.6 98736 3630 49 ENSG00000116001.14 TIA1 chr2 70209444 70248660 - protein_coding KNOWN OTTHUMG00000129644.13 39217 6607 130 ENSG00000221238.1 MIR1285-2 chr2 70252918 70253005 - miRNA KNOWN NA 88 88 1 ENSG00000231414.1 AC016700.6 chr2 70253855 70254010 - processed_pseudogene KNOWN OTTHUMG00000153547.2 156 156 1 ENSG00000116005.10 PCYOX1 chr2 70257386 70281191 + protein_coding KNOWN OTTHUMG00000129671.20 23806 5870 28 ENSG00000143977.12 SNRPG chr2 70281362 70293771 - protein_coding KNOWN OTTHUMG00000129670.4 12410 1795 34 ENSG00000158816.14 VWA5B1 chr1 20290919 20354894 + protein_coding KNOWN OTTHUMG00000002835.6 63976 6377 110 ENSG00000035141.6 FAM136A chr2 70295975 70302090 - protein_coding KNOWN OTTHUMG00000129668.2 6116 3086 18 ENSG00000233849.1 AC022201.5 chr2 70301451 70302072 + antisense NOVEL OTTHUMG00000154180.1 622 287 2 ENSG00000235289.1 BRD7P6 chr2 70353010 70355915 + processed_pseudogene KNOWN OTTHUMG00000153163.1 2906 1860 2 ENSG00000229229.1 AC022201.4 chr2 70402934 70422678 + antisense NOVEL OTTHUMG00000153164.1 19745 577 4 ENSG00000163235.14 TGFA chr2 70447280 70554193 - protein_coding KNOWN OTTHUMG00000129669.39 106914 4963 46 ENSG00000215996.2 AC017084.1 chr2 70455530 70455624 - miRNA NOVEL NA 95 95 1 ENSG00000224606.1 TGFA-IT1 chr2 70467385 70468495 - sense_intronic NOVEL OTTHUMG00000153490.1 1111 436 2 ENSG00000075340.21 ADD2 chr2 70607618 70768225 - protein_coding KNOWN OTTHUMG00000129710.13 160608 12673 137 ENSG00000235035.1 AC007395.3 chr2 70687142 70691824 + antisense NOVEL OTTHUMG00000153445.2 4683 434 2 ENSG00000183733.6 FIGLA chr2 70777310 70790643 - protein_coding KNOWN OTTHUMG00000153440.1 13334 722 5 ENSG00000226664.1 RP4-745E8.2 chr1 20294211 20323187 - antisense NOVEL OTTHUMG00000002836.1 28977 229 2 ENSG00000228034.1 HMGN2P21 chr2 70803157 70803426 + processed_pseudogene KNOWN OTTHUMG00000154079.2 270 270 1 ENSG00000152672.6 CLEC4F chr2 70808643 70820600 - protein_coding KNOWN OTTHUMG00000129713.4 11958 2475 14 ENSG00000231386.1 AC007395.4 chr2 70810798 70811474 - processed_pseudogene KNOWN OTTHUMG00000153611.3 677 677 1 ENSG00000116031.8 CD207 chr2 70830214 70835822 - protein_coding KNOWN OTTHUMG00000153176.6 5609 1869 6 ENSG00000237751.2 LINC01143 chr2 70887871 70889959 + lincRNA NOVEL OTTHUMG00000153230.2 2089 625 4 ENSG00000277764.1 Vax2os1_3 chr2 70900155 70900351 + misc_RNA NOVEL NA 197 197 1 ENSG00000116035.2 VAX2 chr2 70900590 70933446 + protein_coding KNOWN OTTHUMG00000129714.1 32857 1147 3 ENSG00000116039.10 ATP6V1B1 chr2 70935882 70965406 + protein_coding KNOWN OTTHUMG00000129711.9 29525 2653 65 ENSG00000258881.5 AC007040.11 chr2 70939318 70995336 - protein_coding NOVEL OTTHUMG00000129708.6 56019 4451 10 ENSG00000239322.1 ATP6V1B1-AS1 chr2 70941817 70948610 - antisense NOVEL OTTHUMG00000153727.2 6794 1139 5 ENSG00000236963.4 LINC01141 chr1 20360579 20431234 - lincRNA NOVEL OTTHUMG00000002842.1 70656 3172 22 ENSG00000226186.1 TCEB1P21 chr2 70955899 70956234 - processed_pseudogene KNOWN OTTHUMG00000153748.2 336 336 1 ENSG00000241159.3 RN7SL160P chr2 70965584 70965867 + misc_RNA KNOWN NA 284 284 1 ENSG00000144031.10 ANKRD53 chr2 70978380 70985499 + protein_coding KNOWN OTTHUMG00000129712.6 7120 2526 32 ENSG00000144043.10 TEX261 chr2 70985938 70994945 - protein_coding KNOWN OTTHUMG00000170601.1 9008 4260 26 ENSG00000228384.4 AC007040.6 chr2 70994510 71002754 + antisense NOVEL OTTHUMG00000153238.3 8245 477 2 ENSG00000236469.1 AC007040.8 chr2 71002531 71064743 - antisense NOVEL OTTHUMG00000153726.4 62213 570 4 ENSG00000266029.1 AC007040.2 chr2 71012331 71012407 + miRNA NOVEL NA 77 77 1 ENSG00000266186.1 AC007040.3 chr2 71013089 71013157 - miRNA NOVEL NA 69 69 1 ENSG00000265812.1 AC007040.1 chr2 71017024 71017109 + miRNA NOVEL NA 86 86 1 ENSG00000205847.5 OR7E91P chr2 71029028 71029893 + unprocessed_pseudogene KNOWN OTTHUMG00000154170.2 866 866 1 ENSG00000230699.2 RP11-54O7.1 chr1 911435 914948 + lincRNA NOVEL OTTHUMG00000040716.1 3514 3043 2 ENSG00000226487.1 RP4-749H3.2 chr1 20412304 20413253 - lincRNA NOVEL OTTHUMG00000002843.1 950 376 3 ENSG00000234485.5 OR7E46P chr2 71037685 71038703 + unprocessed_pseudogene KNOWN OTTHUMG00000154169.2 1019 1019 1 ENSG00000264382.1 AC007881.1 chr2 71039307 71039360 + miRNA NOVEL NA 54 54 1 ENSG00000234896.1 OR7E62P chr2 71055527 71056003 + unprocessed_pseudogene KNOWN OTTHUMG00000154168.1 477 477 1 ENSG00000124357.11 NAGK chr2 71064344 71079805 + protein_coding KNOWN OTTHUMG00000153239.24 15462 8894 162 ENSG00000272735.1 RP11-467P9.1 chr2 71067519 71068125 - lincRNA NOVEL OTTHUMG00000185975.1 607 607 1 ENSG00000124370.9 MCEE chr2 71109684 71130239 - protein_coding KNOWN OTTHUMG00000129709.20 20556 1624 15 ENSG00000124383.7 MPHOSPH10 chr2 71130314 71150101 + protein_coding KNOWN OTTHUMG00000129715.6 19788 4673 23 ENSG00000233870.1 AC007881.4 chr2 71178587 71178773 + unprocessed_pseudogene KNOWN OTTHUMG00000153654.2 187 187 1 ENSG00000124374.8 PAIP2B chr2 71182739 71227083 - protein_coding KNOWN OTTHUMG00000153284.3 44345 6279 4 ENSG00000075292.17 ZNF638 chr2 71276561 71435069 + protein_coding KNOWN OTTHUMG00000129735.18 158509 12474 185 ENSG00000162545.5 CAMK2N1 chr1 20482391 20486220 - protein_coding KNOWN OTTHUMG00000002837.1 3830 2615 4 ENSG00000281195.1 ZNF638-IT1 chr2 71373938 71376320 + processed_transcript KNOWN OTTHUMG00000189547.1 2383 1615 2 ENSG00000200779.1 RNU6-105P chr2 71379755 71379858 - snRNA KNOWN NA 104 104 1 ENSG00000135636.12 DYSF chr2 71453722 71686768 + protein_coding KNOWN OTTHUMG00000129757.8 233047 8386 671 ENSG00000233971.1 RPS20P10 chr2 71984182 71984434 - processed_pseudogene KNOWN OTTHUMG00000152716.1 253 253 1 ENSG00000003137.7 CYP26B1 chr2 72129238 72148038 - protein_coding KNOWN OTTHUMG00000129756.4 18801 5015 21 ENSG00000276288.1 AC006461.1 chr2 72170559 72170645 + miRNA NOVEL NA 87 87 1 ENSG00000144036.13 EXOC6B chr2 72175984 72826041 - protein_coding KNOWN OTTHUMG00000152723.2 650058 10185 73 ENSG00000228568.1 AC006461.2 chr2 72288785 72289110 + processed_pseudogene KNOWN OTTHUMG00000152715.1 326 326 1 ENSG00000222536.1 RNU2-39P chr2 72721806 72722003 + snRNA KNOWN NA 198 198 1 ENSG00000212378.1 SNORD78 chr2 72760534 72760602 + snoRNA NOVEL NA 69 69 1 ENSG00000090432.6 MUL1 chr1 20499448 20508161 - protein_coding KNOWN OTTHUMG00000002838.2 8714 2438 4 ENSG00000116096.5 SPR chr2 72887360 72892158 + protein_coding KNOWN OTTHUMG00000129777.2 4799 1480 6 ENSG00000135638.12 EMX1 chr2 72916260 72936071 + protein_coding KNOWN OTTHUMG00000129778.6 19812 5516 15 ENSG00000278060.1 RP11-466M21.1 chr2 72932974 72934355 - antisense NOVEL OTTHUMG00000187934.1 1382 473 2 ENSG00000144040.11 SFXN5 chr2 72942036 73075619 - protein_coding KNOWN OTTHUMG00000129775.7 133584 11087 167 ENSG00000135631.14 RAB11FIP5 chr2 73073382 73156721 - protein_coding KNOWN OTTHUMG00000129779.3 83340 5932 19 ENSG00000272702.1 RP11-44N22.3 chr2 73113018 73115907 + processed_transcript NOVEL OTTHUMG00000185982.2 2890 2890 3 ENSG00000214513.3 NOTO chr2 73202258 73212513 + protein_coding KNOWN OTTHUMG00000164128.2 10256 2749 3 ENSG00000135632.10 SMYD5 chr2 73214222 73227237 + protein_coding KNOWN OTTHUMG00000150482.3 13016 3380 48 ENSG00000135617.3 PRADC1 chr2 73228006 73233238 - protein_coding KNOWN OTTHUMG00000129773.2 5233 1407 11 ENSG00000135624.14 CCT7 chr2 73233420 73253021 + protein_coding KNOWN OTTHUMG00000152765.6 19602 3591 103 ENSG00000215520.3 RPS4XP4 chr1 20525989 20526751 + processed_pseudogene KNOWN OTTHUMG00000002839.1 763 763 1 ENSG00000163013.10 FBXO41 chr2 73254682 73284431 - protein_coding KNOWN OTTHUMG00000164127.2 29750 8011 45 ENSG00000135625.7 EGR4 chr2 73290929 73293705 - protein_coding KNOWN OTTHUMG00000129774.5 2777 2377 4 ENSG00000252988.1 RNU6-111P chr2 73298683 73298787 + snRNA KNOWN NA 105 105 1 ENSG00000214484.3 AC074008.1 chr2 73370019 73370892 + processed_pseudogene KNOWN OTTHUMG00000152772.2 874 874 1 ENSG00000116127.16 ALMS1 chr2 73385758 73610793 + protein_coding KNOWN OTTHUMG00000152812.5 225036 14054 97 ENSG00000230002.2 ALMS1-IT1 chr2 73456764 73459484 + sense_intronic NOVEL OTTHUMG00000152785.2 2721 2107 2 ENSG00000221087.1 AC096546.1 chr2 73488579 73488660 - miRNA NOVEL NA 82 82 1 ENSG00000144035.3 NAT8 chr2 73640832 73642393 - protein_coding KNOWN OTTHUMG00000129818.3 1562 947 2 ENSG00000163016.8 ALMS1P chr2 73644919 73685576 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000152773.4 40658 1654 13 ENSG00000204872.3 NAT8B chr2 73700576 73701340 - polymorphic_pseudogene KNOWN OTTHUMG00000152811.3 765 765 2 ENSG00000183114.7 FAM43B chr1 20552439 20555010 + protein_coding KNOWN OTTHUMG00000057491.1 2572 2572 1 ENSG00000144034.13 TPRKB chr2 73729104 73737400 - protein_coding KNOWN OTTHUMG00000129815.2 8297 2047 45 ENSG00000273245.1 RP11-434P11.2 chr2 73750256 73750786 - lincRNA NOVEL OTTHUMG00000185985.1 531 531 1 ENSG00000280037.1 RP11-434P11.1 chr2 73761269 73761781 - TEC KNOWN OTTHUMG00000175915.1 513 513 1 ENSG00000144048.9 DUSP11 chr2 73762184 73780157 - protein_coding KNOWN OTTHUMG00000129816.3 17974 3544 35 ENSG00000187833.7 C2orf78 chr2 73784189 73817147 + protein_coding KNOWN OTTHUMG00000152819.1 32959 3045 3 ENSG00000124356.14 STAMBP chr2 73828916 73873659 + protein_coding KNOWN OTTHUMG00000129817.3 44744 7698 81 ENSG00000271536.1 RP11-51I5.1 chr2 73877566 73878862 + processed_pseudogene KNOWN OTTHUMG00000184324.1 1297 527 2 ENSG00000163017.12 ACTG2 chr2 73892314 73919865 + protein_coding KNOWN OTTHUMG00000129813.4 27552 3811 55 ENSG00000281314.1 AC073046.1 chr2 73916583 73916666 + miRNA NOVEL NA 84 84 1 ENSG00000114956.18 DGUOK chr2 73926826 73958961 + protein_coding KNOWN OTTHUMG00000129819.3 32136 1455 38 ENSG00000158825.5 CDA chr1 20588948 20618908 + protein_coding KNOWN OTTHUMG00000002845.1 29961 963 7 ENSG00000237883.1 DGUOK-AS1 chr2 73947642 73981441 - antisense NOVEL OTTHUMG00000152820.1 33800 865 6 ENSG00000201876.1 RNA5SP97 chr2 73968123 73968206 - rRNA KNOWN NA 84 84 1 ENSG00000235499.1 AC073046.25 chr2 73985132 73986343 + lincRNA NOVEL OTTHUMG00000152824.2 1212 390 2 ENSG00000187605.14 TET3 chr2 73986404 74108176 + protein_coding KNOWN OTTHUMG00000152823.7 121773 12271 26 ENSG00000279181.1 RP11-711M9.2 chr2 73998337 73998548 - TEC KNOWN OTTHUMG00000175920.1 212 212 1 ENSG00000257800.1 FNBP1P1 chr2 74120680 74123218 + processed_pseudogene KNOWN OTTHUMG00000170236.1 2539 1994 2 ENSG00000217702.2 RP11-287D1.4 chr2 74130583 74135395 + lincRNA NOVEL OTTHUMG00000187098.1 4813 1264 3 ENSG00000163170.10 BOLA3 chr2 74135398 74147994 - protein_coding KNOWN OTTHUMG00000152834.2 12597 3156 16 ENSG00000225439.2 BOLA3-AS1 chr2 74148009 74150061 + antisense NOVEL OTTHUMG00000152835.2 2053 1834 7 ENSG00000114978.16 MOB1A chr2 74152528 74178898 - protein_coding KNOWN OTTHUMG00000152833.2 26371 6440 25 ENSG00000158828.5 PINK1 chr1 20633455 20651511 + protein_coding KNOWN OTTHUMG00000002841.1 18057 4836 17 ENSG00000279201.1 RP11-287D1.5 chr2 74191388 74192245 + TEC KNOWN OTTHUMG00000187099.1 858 858 2 ENSG00000279070.2 RP11-287D1.2 chr2 74196698 74198560 - lincRNA NOVEL OTTHUMG00000175955.2 1863 1863 1 ENSG00000065911.10 MTHFD2 chr2 74198562 74217565 + protein_coding KNOWN OTTHUMG00000129814.4 19004 4870 43 ENSG00000264324.1 RP11-287D1.3 chr2 74211604 74363377 - protein_coding NOVEL OTTHUMG00000179354.1 151774 5059 39 ENSG00000188687.14 SLC4A5 chr2 74216242 74343414 - protein_coding KNOWN OTTHUMG00000090263.4 127173 8025 237 ENSG00000229798.1 KRT18P26 chr2 74306728 74308008 - processed_pseudogene KNOWN OTTHUMG00000152933.1 1281 1281 1 ENSG00000252214.1 RNU6-542P chr2 74319399 74319501 + snRNA KNOWN NA 103 103 1 ENSG00000234632.1 NECAP1P2 chr2 74350069 74351009 + processed_pseudogene KNOWN OTTHUMG00000152815.1 941 727 2 ENSG00000225658.1 TAF13P2 chr2 74351134 74351419 + processed_pseudogene KNOWN OTTHUMG00000152793.1 286 286 1 ENSG00000204843.11 DCTN1 chr2 74361154 74392087 - protein_coding KNOWN OTTHUMG00000129963.28 30934 10439 317 ENSG00000273695.1 MIR6084 chr1 20633679 20633788 + miRNA KNOWN NA 110 110 1 ENSG00000237737.4 DCTN1-AS1 chr2 74385486 74393882 + antisense NOVEL OTTHUMG00000152826.1 8397 3174 18 ENSG00000234521.1 AC005041.11 chr2 74413020 74413481 - processed_pseudogene KNOWN OTTHUMG00000152825.1 462 306 2 ENSG00000159239.10 C2orf81 chr2 74414176 74421591 - protein_coding KNOWN OTTHUMG00000164184.1 7416 2995 16 ENSG00000233155.1 HMGA1P8 chr2 74418122 74418442 - processed_pseudogene KNOWN OTTHUMG00000152827.1 321 321 1 ENSG00000005448.15 WDR54 chr2 74421678 74425755 + protein_coding KNOWN OTTHUMG00000129951.3 4078 2860 81 ENSG00000114993.14 RTKN chr2 74425836 74442422 - protein_coding KNOWN OTTHUMG00000129955.5 16587 5005 58 ENSG00000115274.13 INO80B chr2 74455023 74457960 + protein_coding KNOWN OTTHUMG00000129959.3 2938 1522 42 ENSG00000274049.3 INO80B-WBP1 chr2 74455088 74460884 + protein_coding NOVEL OTTHUMG00000187278.1 5797 2040 16 ENSG00000239779.5 WBP1 chr2 74458329 74460891 + protein_coding KNOWN OTTHUMG00000129958.2 2563 2438 58 ENSG00000115275.10 MOGS chr2 74461057 74465410 - protein_coding KNOWN OTTHUMG00000152886.1 4354 3234 31 ENSG00000117242.7 PINK1-AS chr1 20642657 20652193 - antisense NOVEL OTTHUMG00000002840.1 9537 4443 3 ENSG00000204822.6 MRPL53 chr2 74471958 74473322 - protein_coding KNOWN OTTHUMG00000129961.2 1365 1344 9 ENSG00000135637.12 CCDC142 chr2 74471986 74483408 - protein_coding KNOWN OTTHUMG00000129962.2 11423 4897 50 ENSG00000115282.18 TTC31 chr2 74483073 74494886 + protein_coding KNOWN OTTHUMG00000152887.1 11814 5094 105 ENSG00000179528.14 LBX2 chr2 74497517 74503316 - protein_coding KNOWN OTTHUMG00000170595.5 5800 2389 12 ENSG00000272183.1 RP11-523H20.3 chr2 74501717 74502365 + antisense NOVEL OTTHUMG00000185364.1 649 649 1 ENSG00000257702.3 LBX2-AS1 chr2 74502595 74504678 + antisense KNOWN OTTHUMG00000170509.3 2084 2084 3 ENSG00000115289.11 PCGF1 chr2 74505043 74508580 - protein_coding KNOWN OTTHUMG00000129954.4 3538 2629 47 ENSG00000115297.10 TLX2 chr2 74513463 74517147 + protein_coding KNOWN OTTHUMG00000129960.4 3685 2775 13 ENSG00000144045.12 DQX1 chr2 74518131 74526336 - protein_coding KNOWN OTTHUMG00000129965.5 8206 2940 53 ENSG00000115307.15 AUP1 chr2 74526645 74529939 - protein_coding KNOWN OTTHUMG00000129964.3 3295 2634 58 ENSG00000244038.8 DDOST chr1 20651767 20661544 - protein_coding KNOWN OTTHUMG00000002844.5 9778 2721 41 ENSG00000115317.10 HTRA2 chr2 74529377 74533348 + protein_coding KNOWN OTTHUMG00000129957.4 3972 3001 60 ENSG00000115318.10 LOXL3 chr2 74532414 74555690 - protein_coding KNOWN OTTHUMG00000129953.3 23277 4363 84 ENSG00000115325.12 DOK1 chr2 74549026 74557554 + protein_coding KNOWN OTTHUMG00000129956.3 8529 3049 49 ENSG00000159374.16 M1AP chr2 74557883 74648338 - protein_coding KNOWN OTTHUMG00000152918.7 90456 3000 53 ENSG00000233872.1 AC005033.6 chr2 74618856 74620979 - processed_pseudogene KNOWN OTTHUMG00000152919.1 2124 813 2 ENSG00000108442.2 TVP23BP2 chr2 74628328 74628942 - processed_pseudogene KNOWN OTTHUMG00000152917.1 615 615 1 ENSG00000135622.11 SEMA4F chr2 74654228 74683853 + protein_coding KNOWN OTTHUMG00000129952.8 29626 6227 83 ENSG00000224646.2 AC007387.2 chr2 74754670 74754819 - processed_pseudogene KNOWN OTTHUMG00000152924.1 150 150 1 ENSG00000272711.1 RP11-259N19.1 chr2 74832655 74833987 - lincRNA NOVEL OTTHUMG00000185987.1 1333 1333 1 ENSG00000159399.8 HK2 chr2 74833981 74893359 + protein_coding KNOWN OTTHUMG00000129972.5 59379 6064 38 ENSG00000241180.1 RP11-54O7.2 chr1 914171 914971 + lincRNA NOVEL OTTHUMG00000040717.2 801 443 2 ENSG00000117245.11 KIF17 chr1 20664014 20718017 - protein_coding KNOWN OTTHUMG00000002863.3 54004 4470 76 ENSG00000204792.2 LINC01291 chr2 74918148 74938418 + lincRNA NOVEL OTTHUMG00000152932.1 20271 4176 9 ENSG00000236209.1 AC104135.2 chr2 74919555 74924846 - lincRNA NOVEL OTTHUMG00000152930.1 5292 763 2 ENSG00000230836.1 LINC01293 chr2 74940258 74942670 + lincRNA NOVEL OTTHUMG00000152931.1 2413 1266 2 ENSG00000115350.10 POLE4 chr2 74958492 74970128 + protein_coding KNOWN OTTHUMG00000129971.2 11637 2151 22 ENSG00000115353.9 TACR1 chr2 75046463 75199700 - protein_coding KNOWN OTTHUMG00000129973.3 153238 5308 11 ENSG00000263909.1 MIR5000 chr2 75090812 75090914 + miRNA KNOWN NA 103 103 1 ENSG00000270571.2 RP11-355F16.1 chr2 75154366 75189949 + antisense NOVEL OTTHUMG00000185268.2 35584 3438 3 ENSG00000236167.1 GAPDHP57 chr2 75455994 75456578 - processed_pseudogene KNOWN OTTHUMG00000152942.1 585 585 1 ENSG00000115363.12 EVA1A chr2 75469302 75569722 - protein_coding KNOWN OTTHUMG00000129991.2 100421 2744 39 ENSG00000237293.1 AC007099.2 chr2 75474453 75482579 + antisense NOVEL OTTHUMG00000152939.1 8127 336 2 ENSG00000235432.1 RP5-930J4.5 chr1 20692734 20694013 - unprocessed_pseudogene KNOWN OTTHUMG00000129003.1 1280 479 4 ENSG00000238410.1 snoU109 chr2 75489576 75489710 + snoRNA NOVEL NA 135 135 1 ENSG00000231172.2 AC007099.1 chr2 75524068 75542706 + antisense NOVEL OTTHUMG00000152941.2 18639 1185 3 ENSG00000230477.1 AC005034.2 chr2 75598071 75598559 + processed_pseudogene KNOWN OTTHUMG00000152943.1 489 489 1 ENSG00000221638.2 U3 chr2 75627950 75628168 + snoRNA NOVEL NA 219 219 1 ENSG00000115364.12 MRPL19 chr2 75646783 75690851 + protein_coding KNOWN OTTHUMG00000129990.4 44069 4601 31 ENSG00000226247.1 SUPT4H1P chr2 75651288 75651627 - processed_pseudogene KNOWN OTTHUMG00000152940.1 340 340 1 ENSG00000005436.12 GCFC2 chr2 75652000 75710989 - protein_coding KNOWN OTTHUMG00000129989.3 58990 5465 101 ENSG00000270696.1 RP11-342K6.1 chr2 75660462 75662208 + antisense NOVEL OTTHUMG00000185090.1 1747 1747 1 ENSG00000271452.1 RP11-342K6.2 chr2 75669989 75670454 + sense_intronic NOVEL OTTHUMG00000185091.1 466 466 1 ENSG00000270462.1 RP11-342K6.3 chr2 75697583 75697996 + antisense NOVEL OTTHUMG00000185092.1 414 414 1 ENSG00000189410.10 SH2D5 chr1 20719732 20732837 - protein_coding KNOWN OTTHUMG00000002620.2 13106 4423 46 ENSG00000270996.1 RP11-342K6.4 chr2 75719120 75720018 + lincRNA NOVEL OTTHUMG00000185093.1 899 899 1 ENSG00000233107.1 SUCLA2P2 chr2 76106016 76107324 - processed_pseudogene KNOWN OTTHUMG00000152944.1 1309 1309 1 ENSG00000228209.1 AC073091.2 chr2 76258034 76258897 - processed_pseudogene KNOWN OTTHUMG00000152945.2 864 864 1 ENSG00000271356.1 RP11-335E8.1 chr2 76260755 76261661 - processed_pseudogene KNOWN OTTHUMG00000184501.1 907 907 1 ENSG00000200488.1 RN7SKP203 chr2 76445079 76445410 - misc_RNA KNOWN NA 332 332 1 ENSG00000251947.1 RN7SKP164 chr2 76595413 76595678 - misc_RNA KNOWN NA 266 266 1 ENSG00000176204.12 LRRTM4 chr2 76747719 77593319 - protein_coding KNOWN OTTHUMG00000152842.1 845601 5410 20 ENSG00000200028.1 RNA5SP98 chr2 76772909 76773045 + rRNA KNOWN NA 137 137 1 ENSG00000234653.1 AC079117.1 chr2 76985965 77009791 + antisense NOVEL OTTHUMG00000152840.1 23827 1000 4 ENSG00000211984.2 AC079117.2 chr2 77020336 77020421 - miRNA NOVEL NA 86 86 1 ENSG00000233069.1 RP5-930J4.2 chr1 20732880 20733952 + antisense NOVEL OTTHUMG00000002621.1 1073 299 2 ENSG00000263447.1 AC079117.3 chr2 77041778 77041863 - miRNA NOVEL NA 86 86 1 ENSG00000227088.1 AC084149.2 chr2 77652413 77654668 - lincRNA NOVEL OTTHUMG00000152843.1 2256 284 2 ENSG00000230968.1 AC084149.1 chr2 77672215 77673792 + lincRNA NOVEL OTTHUMG00000152841.1 1578 797 2 ENSG00000221704.2 AC105399.1 chr2 77731871 77731956 - miRNA NOVEL NA 86 86 1 ENSG00000237077.1 AC105399.2 chr2 77788382 77793087 + transcribed_processed_pseudogene KNOWN OTTHUMG00000152847.2 4706 418 3 ENSG00000233605.2 AC073628.1 chr2 77915934 77918011 + lincRNA NOVEL OTTHUMG00000152845.2 2078 637 3 ENSG00000229494.1 AC012494.1 chr2 78088730 78127806 + lincRNA NOVEL OTTHUMG00000152846.1 39077 1103 6 ENSG00000214429.3 CYCSP6 chr2 78412793 78413094 - processed_pseudogene KNOWN OTTHUMG00000152870.1 302 302 1 ENSG00000270470.1 RP11-601H16.1 chr2 78437850 78438921 + processed_pseudogene KNOWN OTTHUMG00000184323.1 1072 1072 1 ENSG00000234877.2 AC092660.1 chr2 78597911 78599406 + lincRNA NOVEL OTTHUMG00000152871.2 1496 371 2 ENSG00000127483.16 HP1BP3 chr1 20742661 20787323 - protein_coding KNOWN OTTHUMG00000002622.5 44663 7442 80 ENSG00000202423.1 RNU6-827P chr2 78882447 78882552 + snRNA KNOWN NA 106 106 1 ENSG00000200048.1 RNU6-812P chr2 78882628 78882734 + snRNA KNOWN NA 107 107 1 ENSG00000143954.11 REG3G chr2 79025686 79028505 + protein_coding KNOWN OTTHUMG00000130018.3 2820 1845 22 ENSG00000172023.6 REG1B chr2 79085030 79088019 - protein_coding KNOWN OTTHUMG00000130019.2 2990 2384 19 ENSG00000115386.5 REG1A chr2 79120362 79123419 + protein_coding KNOWN OTTHUMG00000130016.2 3058 1725 15 ENSG00000204787.7 REG1P chr2 79135503 79138427 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000152978.3 2925 2586 24 ENSG00000172016.14 REG3A chr2 79157003 79159753 - protein_coding KNOWN OTTHUMG00000130017.3 2751 1583 21 ENSG00000224879.1 AC011754.1 chr2 79158374 79185523 + sense_overlapping NOVEL OTTHUMG00000152958.1 27150 491 3 ENSG00000066032.17 CTNNA2 chr2 79185231 80648861 + protein_coding KNOWN OTTHUMG00000152903.12 1463631 7535 170 ENSG00000229385.1 AC010975.1 chr2 79493716 79500844 - antisense NOVEL OTTHUMG00000152910.1 7129 669 5 ENSG00000075151.18 EIF4G3 chr1 20806292 21176888 - protein_coding KNOWN OTTHUMG00000002624.5 370597 8535 193 ENSG00000277171.1 RP11-191H23.1 chr2 79547151 79548128 - unprocessed_pseudogene KNOWN OTTHUMG00000187601.1 978 978 1 ENSG00000230237.1 AC010975.2 chr2 79573764 79575593 - processed_pseudogene KNOWN OTTHUMG00000152950.2 1830 588 2 ENSG00000252031.1 RNU6-561P chr2 79636862 79636963 - snRNA KNOWN NA 102 102 1 ENSG00000266436.1 MIR4264 chr2 79649294 79649359 - miRNA KNOWN NA 66 66 1 ENSG00000263566.1 AC096753.1 chr2 79794270 79794381 + miRNA NOVEL NA 112 112 1 ENSG00000276917.1 MIR8080 chr2 79866495 79866583 - miRNA KNOWN NA 89 89 1 ENSG00000224731.1 AC016716.2 chr2 80028012 80030551 - antisense NOVEL OTTHUMG00000152926.1 2540 486 3 ENSG00000223427.1 AC016716.1 chr2 80162428 80163135 - processed_pseudogene KNOWN OTTHUMG00000152889.1 708 708 1 ENSG00000221179.1 AC016670.1 chr2 80244623 80244718 + miRNA NOVEL NA 96 96 1 ENSG00000162951.9 LRRTM1 chr2 80288351 80304749 - protein_coding KNOWN OTTHUMG00000130021.6 16399 5044 18 ENSG00000251914.1 RNU7-200P chr1 20841241 20841302 + snRNA KNOWN NA 62 62 1 ENSG00000237031.6 AC008067.2 chr2 80572681 80618777 - antisense NOVEL OTTHUMG00000152911.4 46097 3357 31 ENSG00000230975.1 AC084193.1 chr2 80699388 80870190 - lincRNA NOVEL OTTHUMG00000152890.1 170803 769 5 ENSG00000234429.1 AC105342.1 chr2 81194337 81201184 - processed_pseudogene KNOWN OTTHUMG00000152946.1 6848 6848 1 ENSG00000231722.1 AC012075.1 chr2 81418723 81419302 - processed_pseudogene KNOWN OTTHUMG00000152948.1 580 580 1 ENSG00000235519.1 AC012075.2 chr2 81462695 81466946 - lincRNA NOVEL OTTHUMG00000152947.1 4252 520 2 ENSG00000200890.1 RNA5SP99 chr2 81496214 81496327 - rRNA KNOWN NA 114 114 1 ENSG00000233444.1 AC013262.1 chr2 81666477 81666728 - processed_pseudogene KNOWN OTTHUMG00000152953.1 252 252 1 ENSG00000242118.3 RN7SL201P chr2 81967079 81967374 + misc_RNA KNOWN NA 296 296 1 ENSG00000231781.1 AC079896.1 chr2 81983272 82005700 - lincRNA NOVEL OTTHUMG00000152955.1 22429 488 5 ENSG00000229560.1 LYARP1 chr2 82268427 82269927 - processed_pseudogene KNOWN OTTHUMG00000152954.1 1501 1501 1 ENSG00000221808.1 MIR1256 chr1 20988314 20988432 - miRNA KNOWN NA 119 119 1 ENSG00000252897.1 RNU6-685P chr2 82268612 82268706 + snRNA KNOWN NA 95 95 1 ENSG00000201311.1 Y_RNA chr2 82307067 82307168 - misc_RNA NOVEL NA 102 102 1 ENSG00000237498.2 AC010105.1 chr2 82479128 82538711 - lincRNA NOVEL OTTHUMG00000152956.1 59584 385 3 ENSG00000226860.1 AC109638.1 chr2 82609652 82609977 + processed_pseudogene KNOWN OTTHUMG00000152957.1 326 326 1 ENSG00000226700.1 MTND4P25 chr2 82814984 82815516 + processed_pseudogene KNOWN OTTHUMG00000152963.1 533 533 1 ENSG00000225045.1 MTND5P27 chr2 82815809 82817528 + processed_pseudogene KNOWN OTTHUMG00000152965.1 1720 1720 1 ENSG00000224695.1 MTND6P7 chr2 82817538 82818061 - processed_pseudogene KNOWN OTTHUMG00000152964.1 524 524 1 ENSG00000227789.1 AC098817.3 chr2 82818131 82819264 + processed_pseudogene KNOWN OTTHUMG00000152962.1 1134 1134 1 ENSG00000168129.8 AC098817.5 chr2 82856826 82857384 + processed_pseudogene KNOWN OTTHUMG00000152960.1 559 559 1 ENSG00000223977.1 AC138623.1 chr2 83218890 83219105 - processed_pseudogene KNOWN OTTHUMG00000152961.1 216 216 1 ENSG00000233072.1 RPS15AP6 chr1 21003550 21003934 - processed_pseudogene KNOWN OTTHUMG00000002778.1 385 385 1 ENSG00000232548.1 AC010744.1 chr2 83522814 83523502 + lincRNA NOVEL OTTHUMG00000152969.1 689 303 2 ENSG00000224627.1 RPL37P10 chr2 83594956 83595243 + processed_pseudogene KNOWN OTTHUMG00000152971.1 288 288 1 ENSG00000199295.1 RNU6-1312P chr2 83657735 83657842 + snRNA KNOWN NA 108 108 1 ENSG00000236198.1 AC104395.2 chr2 83874708 83876333 - processed_pseudogene KNOWN OTTHUMG00000152972.1 1626 1626 1 ENSG00000223700.1 AC104395.1 chr2 83877727 83878553 - processed_pseudogene KNOWN OTTHUMG00000152970.1 827 555 2 ENSG00000228225.1 AC016908.1 chr2 84031140 84032358 + processed_pseudogene KNOWN OTTHUMG00000152974.2 1219 1219 1 ENSG00000228902.1 ST6GALNAC2P1 chr2 84039885 84040720 - processed_pseudogene KNOWN OTTHUMG00000152973.1 836 836 1 ENSG00000182814.7 FUNDC2P2 chr2 84290683 84292202 + transcribed_processed_pseudogene KNOWN OTTHUMG00000152875.4 1520 1223 3 ENSG00000228272.1 AC106874.1 chr2 84315108 84350774 + lincRNA NOVEL OTTHUMG00000152874.1 35667 646 3 ENSG00000233373.1 AC106874.3 chr2 84327262 84327567 + processed_pseudogene KNOWN OTTHUMG00000153038.1 306 306 1 ENSG00000236073.2 RP11-487E1.2 chr1 21073639 21073753 - processed_pseudogene KNOWN OTTHUMG00000002779.2 115 115 1 ENSG00000278669.1 AC106874.2 chr2 84374002 84374093 + miRNA NOVEL NA 92 92 1 ENSG00000163541.10 SUCLG1 chr2 84423523 84460045 - protein_coding KNOWN OTTHUMG00000130023.4 36523 4286 40 ENSG00000115423.17 DNAH6 chr2 84516455 84819589 + protein_coding KNOWN OTTHUMG00000128957.9 303135 13514 188 ENSG00000259056.1 DUXAP1 chr2 84750769 84751231 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000170724.1 463 463 1 ENSG00000235847.2 LDHAP7 chr2 84777259 84778223 - processed_pseudogene KNOWN OTTHUMG00000152923.2 965 965 1 ENSG00000186854.9 TRABD2A chr2 84821650 84907008 - protein_coding KNOWN OTTHUMG00000152922.6 85359 8771 40 ENSG00000276362.1 RP11-241M13.2 chr2 84850711 84851148 + unprocessed_pseudogene KNOWN OTTHUMG00000187606.1 438 438 1 ENSG00000213400.3 RPL12P18 chr2 84874696 84875020 + processed_pseudogene KNOWN OTTHUMG00000152921.1 325 325 1 ENSG00000279992.1 AC022210.1 chr2 84895085 84895221 - protein_coding KNOWN NA 137 54 2 ENSG00000034510.5 TMSB10 chr2 84905625 84906675 + protein_coding KNOWN OTTHUMG00000130027.5 1051 496 3 ENSG00000223764.2 RP11-54O7.3 chr1 916865 921016 - lincRNA NOVEL OTTHUMG00000040718.2 4152 4152 7 ENSG00000235112.1 HSPE1P27 chr1 21161475 21162081 + processed_pseudogene KNOWN OTTHUMG00000002776.1 607 296 2 ENSG00000213399.3 AC022210.2 chr2 84915868 84916660 + processed_pseudogene KNOWN OTTHUMG00000153009.1 793 793 1 ENSG00000176407.16 KCMF1 chr2 84971093 85059472 + protein_coding KNOWN OTTHUMG00000153004.11 88380 7968 18 ENSG00000260840.1 RP11-60H5.1 chr2 85064108 85067347 - lincRNA NOVEL OTTHUMG00000175958.1 3240 3137 2 ENSG00000235463.1 AC078974.2 chr2 85068809 85069031 - processed_pseudogene KNOWN OTTHUMG00000154059.1 223 223 1 ENSG00000225787.1 LSM3P3 chr2 85102389 85102694 - processed_pseudogene KNOWN OTTHUMG00000153212.1 306 306 1 ENSG00000152284.4 TCF7L1 chr2 85133410 85310388 + protein_coding KNOWN OTTHUMG00000130026.4 176979 4414 22 ENSG00000231134.1 TCF7L1-IT1 chr2 85186409 85187253 + sense_intronic NOVEL OTTHUMG00000153211.1 845 458 2 ENSG00000200701.1 RNU6-674P chr2 85204926 85205032 + snRNA KNOWN NA 107 107 1 ENSG00000230299.1 AC093162.3 chr2 85262144 85262267 - processed_pseudogene KNOWN OTTHUMG00000153014.1 124 124 1 ENSG00000221579.1 AC093162.1 chr2 85299034 85299118 + miRNA NOVEL NA 85 85 1 ENSG00000117298.13 ECE1 chr1 21217247 21345504 - protein_coding KNOWN OTTHUMG00000002625.2 128258 7265 132 ENSG00000246575.2 AC093162.5 chr2 85315041 85316529 + unprocessed_pseudogene KNOWN OTTHUMG00000130172.4 1489 704 5 ENSG00000152291.12 TGOLN2 chr2 85318020 85328425 - protein_coding KNOWN OTTHUMG00000153017.4 10406 7081 25 ENSG00000239143.1 Y_RNA chr2 85332895 85332996 - misc_RNA NOVEL NA 102 102 1 ENSG00000270532.1 PEBP1P2 chr2 85341281 85341838 - processed_pseudogene KNOWN OTTHUMG00000184503.1 558 558 1 ENSG00000042445.12 RETSAT chr2 85342088 85354620 - protein_coding KNOWN OTTHUMG00000154611.4 12533 4005 41 ENSG00000115459.16 ELMOD3 chr2 85354394 85391752 + protein_coding KNOWN OTTHUMG00000130170.15 37359 7259 193 ENSG00000271014.1 RP11-717A5.1 chr2 85360798 85360925 - processed_pseudogene KNOWN OTTHUMG00000184504.1 128 128 1 ENSG00000202382.1 Y_RNA chr2 85367585 85367686 + misc_RNA NOVEL NA 102 102 1 ENSG00000278590.1 Metazoa_SRP chr2 85368282 85368580 + misc_RNA NOVEL NA 299 299 1 ENSG00000273196.1 RP11-717A5.2 chr2 85387074 85387146 - antisense NOVEL OTTHUMG00000185994.1 73 73 1 ENSG00000236936.1 RP3-329E20.2 chr1 21266082 21267251 + antisense NOVEL OTTHUMG00000002623.1 1170 723 3 ENSG00000042493.14 CAPG chr2 85394748 85418432 - protein_coding KNOWN OTTHUMG00000130183.21 23685 2607 99 ENSG00000152292.15 SH2D6 chr2 85418721 85437029 + protein_coding KNOWN OTTHUMG00000130176.4 18309 3858 75 ENSG00000207207.1 Y_RNA chr2 85434507 85434619 + misc_RNA NOVEL NA 113 113 1 ENSG00000244399.3 RN7SL251P chr2 85442495 85442791 + misc_RNA KNOWN NA 297 297 1 ENSG00000199936.1 Y_RNA chr2 85460144 85460252 - misc_RNA NOVEL NA 109 109 1 ENSG00000229648.1 AC016753.7 chr2 85490930 85491780 - processed_pseudogene KNOWN OTTHUMG00000153083.1 851 851 1 ENSG00000168906.11 MAT2A chr2 85539165 85545280 + protein_coding KNOWN OTTHUMG00000130174.6 6116 4487 31 ENSG00000115486.10 GGCX chr2 85544723 85561547 - protein_coding KNOWN OTTHUMG00000130173.7 16825 9098 57 ENSG00000118640.9 VAMP8 chr2 85561562 85582031 + protein_coding KNOWN OTTHUMG00000130180.4 20470 990 10 ENSG00000276281.1 Metazoa_SRP chr2 85567662 85567960 - misc_RNA NOVEL NA 299 299 1 ENSG00000231105.1 RP5-1071N3.1 chr1 21293290 21299774 + antisense NOVEL OTTHUMG00000002777.1 6485 2479 3 ENSG00000280656.1 AC016753.1 chr2 85567662 85567737 - miRNA NOVEL NA 76 76 1 ENSG00000281331.1 AC016753.2 chr2 85573870 85574886 - protein_coding NOVEL NA 1017 75 2 ENSG00000168899.4 VAMP5 chr2 85584408 85593412 + protein_coding KNOWN OTTHUMG00000130169.2 9005 819 5 ENSG00000168894.8 RNF181 chr2 85595725 85597613 + protein_coding KNOWN OTTHUMG00000130182.3 1889 1220 23 ENSG00000168890.12 TMEM150A chr2 85598548 85603196 - protein_coding KNOWN OTTHUMG00000130168.3 4649 3094 65 ENSG00000168883.18 USP39 chr2 85602856 85649282 + protein_coding KNOWN OTTHUMG00000153090.9 46427 3952 150 ENSG00000168887.9 C2orf68 chr2 85606654 85612066 - protein_coding KNOWN OTTHUMG00000153088.2 5413 4413 14 ENSG00000168878.15 SFTPB chr2 85657314 85668741 - protein_coding KNOWN OTTHUMG00000130181.5 11428 4110 55 ENSG00000115523.15 GNLY chr2 85685175 85698854 + protein_coding KNOWN OTTHUMG00000130179.4 13680 3051 58 ENSG00000203363.2 AC012454.4 chr2 85686053 85687047 - processed_pseudogene KNOWN OTTHUMG00000153167.1 995 995 1 ENSG00000236216.5 PPP1R11P1 chr1 21397987 21398362 + processed_pseudogene KNOWN OTTHUMG00000002940.1 376 376 1 ENSG00000199687.1 RNU1-38P chr2 85728194 85728337 - snRNA KNOWN NA 144 144 1 ENSG00000168874.11 ATOH8 chr2 85751344 85788066 + protein_coding KNOWN OTTHUMG00000130178.2 36723 6076 15 ENSG00000278783.1 MIR6071 chr2 85783600 85783677 - miRNA KNOWN NA 78 78 1 ENSG00000229498.1 AC105053.3 chr2 85815130 85825391 + antisense NOVEL OTTHUMG00000153166.1 10262 1711 3 ENSG00000252321.1 RN7SKP83 chr2 85820435 85820612 - misc_RNA KNOWN NA 178 178 1 ENSG00000115525.15 ST3GAL5 chr2 85839144 85889014 - protein_coding KNOWN OTTHUMG00000130171.3 49871 5549 59 ENSG00000232504.4 ST3GAL5-AS1 chr2 85889280 85890980 + lincRNA NOVEL OTTHUMG00000153169.4 1701 783 2 ENSG00000272564.1 RP11-548P2.2 chr2 85904279 85904727 + lincRNA NOVEL OTTHUMG00000185996.1 449 449 1 ENSG00000068654.14 POLR1A chr2 86020216 86106155 - protein_coding KNOWN OTTHUMG00000153165.3 85940 13519 103 ENSG00000132300.17 PTCD3 chr2 86106182 86142157 + protein_coding KNOWN OTTHUMG00000153168.4 35976 10164 128 ENSG00000228823.1 RP11-293F5.8 chr1 21411460 21413293 - unprocessed_pseudogene KNOWN OTTHUMG00000057493.1 1834 649 2 ENSG00000208772.1 SNORD94 chr2 86135870 86136006 + snoRNA KNOWN NA 137 137 1 ENSG00000132305.19 IMMT chr2 86143932 86195770 - protein_coding KNOWN OTTHUMG00000153170.5 51839 3986 123 ENSG00000200241.1 Y_RNA chr2 86159956 86160066 - misc_RNA NOVEL NA 111 111 1 ENSG00000265420.1 MIR4779 chr2 86193026 86193108 - miRNA KNOWN NA 83 83 1 ENSG00000273080.1 RP11-301O19.1 chr2 86195590 86196049 + antisense NOVEL OTTHUMG00000185997.1 460 460 1 ENSG00000132313.13 MRPL35 chr2 86199355 86213794 + protein_coding KNOWN OTTHUMG00000037385.4 14440 3829 17 ENSG00000068615.15 REEP1 chr2 86213993 86338083 - protein_coding KNOWN OTTHUMG00000130205.5 124091 5193 56 ENSG00000202537.1 U8 chr2 86347062 86347195 - snoRNA NOVEL NA 134 134 1 ENSG00000251974.1 SNORA19 chr2 86364136 86364265 + snoRNA NOVEL NA 130 130 1 ENSG00000115548.15 KDM3A chr2 86440647 86492716 + protein_coding KNOWN OTTHUMG00000130204.5 52070 13423 169 ENSG00000236009.1 RP11-293F5.1 chr1 21415898 21417492 + lincRNA NOVEL OTTHUMG00000002945.1 1595 761 6 ENSG00000115561.13 CHMP3 chr2 86503430 86620493 - protein_coding KNOWN OTTHUMG00000153189.26 117064 7183 47 ENSG00000249884.7 RNF103-CHMP3 chr2 86505668 86721122 - protein_coding KNOWN OTTHUMG00000160822.3 215455 1503 13 ENSG00000200563.1 RNU6-640P chr2 86515204 86515308 - snRNA KNOWN NA 105 105 1 ENSG00000228363.2 AC015971.2 chr2 86562070 86618766 + antisense NOVEL OTTHUMG00000153204.3 56697 2860 14 ENSG00000281177.1 AC015971.3 chr2 86567320 86567464 - miRNA NOVEL NA 145 145 1 ENSG00000252453.2 AC015971.1 chr2 86586140 86586230 + miRNA NOVEL NA 91 91 1 ENSG00000239305.5 RNF103 chr2 86603393 86623866 - protein_coding KNOWN OTTHUMG00000153197.4 20474 7599 23 ENSG00000153561.11 RMND5A chr2 86720173 86778041 + protein_coding KNOWN OTTHUMG00000130262.3 57869 6804 20 ENSG00000281148.1 AC064848.1 chr2 86779030 86779127 - miRNA NOVEL NA 98 98 1 ENSG00000153563.14 CD8A chr2 86784610 86808396 - protein_coding KNOWN OTTHUMG00000130265.6 23787 3634 25 ENSG00000227001.3 NBPF2P chr1 21424625 21427967 - unprocessed_pseudogene KNOWN OTTHUMG00000002941.1 3343 661 5 ENSG00000172116.20 CD8B chr2 86815339 86861924 - protein_coding KNOWN OTTHUMG00000130264.6 46586 1864 34 ENSG00000233673.5 ANAPC1P1 chr2 86861825 86922693 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000153325.2 60869 2557 32 ENSG00000213605.2 AC111200.2 chr2 86885075 86885731 - processed_pseudogene KNOWN OTTHUMG00000153247.1 657 657 1 ENSG00000187627.13 RGPD1 chr2 86907953 87013981 + protein_coding KNOWN OTTHUMG00000153248.10 106029 6871 79 ENSG00000231351.2 AC111200.7 chr2 86930250 86930754 - processed_pseudogene KNOWN OTTHUMG00000153280.1 505 505 1 ENSG00000226114.1 AC111200.8 chr2 86934462 86934822 - processed_pseudogene KNOWN OTTHUMG00000153279.1 361 361 1 ENSG00000183281.13 PLGLB1 chr2 87002559 87021852 - protein_coding KNOWN OTTHUMG00000154612.3 19294 3220 29 ENSG00000231259.4 AC125232.1 chr2 87031815 87053069 - unprocessed_pseudogene KNOWN OTTHUMG00000153315.2 21255 1408 8 ENSG00000266931.1 RP11-1252D15.1 chr2 87055658 87055800 - unprocessed_pseudogene KNOWN OTTHUMG00000180815.1 143 143 1 ENSG00000230395.1 AC092651.1 chr2 87118534 87120980 - unprocessed_pseudogene KNOWN OTTHUMG00000153250.2 2447 312 3 ENSG00000187952.9 HS6ST1P1 chr1 21428303 21429536 + processed_pseudogene KNOWN OTTHUMG00000002942.3 1234 1234 1 ENSG00000204745.3 AC083899.3 chr2 87125390 87196647 + unprocessed_pseudogene KNOWN OTTHUMG00000153253.3 71258 3819 31 ENSG00000264793.1 MIR4771-2 chr2 87194786 87194859 + miRNA KNOWN NA 74 74 1 ENSG00000233671.1 AC083899.1 chr2 87221113 87222488 - processed_pseudogene KNOWN OTTHUMG00000153249.1 1376 1376 1 ENSG00000281477.1 RP11-223J6.2 chr2 87249095 87253750 - lincRNA NOVEL OTTHUMG00000189701.1 4656 792 2 ENSG00000271097.1 RP11-223J6.1 chr2 87301658 87302251 + processed_pseudogene KNOWN OTTHUMG00000184322.1 594 594 1 ENSG00000233999.3 IGKV3OR2-268 chr2 87338511 87339035 + IG_V_gene KNOWN OTTHUMG00000153256.2 525 350 2 ENSG00000224881.1 AC068279.3 chr2 87379880 87380767 - processed_pseudogene KNOWN OTTHUMG00000153254.2 888 888 1 ENSG00000280721.1 AC133644.2 chr2 87439523 87459044 - lincRNA NOVEL OTTHUMG00000153255.4 19522 1475 6 ENSG00000222041.9 LINC00152 chr2 87455368 87606805 + lincRNA NOVEL OTTHUMG00000130273.12 151438 3456 39 ENSG00000273445.1 RP11-1399P15.1 chr2 87477495 87478034 - antisense NOVEL OTTHUMG00000186003.1 540 540 1 ENSG00000186543.7 CROCCP5 chr1 21434318 21437558 + unprocessed_pseudogene KNOWN OTTHUMG00000002943.1 3241 830 5 ENSG00000214354.3 AC133644.3 chr2 87565828 87566764 - processed_pseudogene KNOWN OTTHUMG00000153257.2 937 937 1 ENSG00000265507.1 MIR4435-1 chr2 87629755 87629834 + miRNA KNOWN NA 80 80 1 ENSG00000225933.1 AC133965.1 chr2 87654890 87655243 + processed_pseudogene KNOWN OTTHUMG00000153258.1 354 354 1 ENSG00000234231.3 AC093616.4 chr2 87700984 87738105 + unprocessed_pseudogene KNOWN OTTHUMG00000153245.6 37122 2095 15 ENSG00000125551.17 PLGLB2 chr2 87748087 87758793 + protein_coding KNOWN OTTHUMG00000153273.4 10707 2254 12 ENSG00000185304.13 RGPD2 chr2 87755955 87825952 - protein_coding KNOWN OTTHUMG00000153276.3 69998 6991 25 ENSG00000229604.2 MTATP8P2 chr2 87824942 87825143 + processed_pseudogene KNOWN OTTHUMG00000153275.2 202 202 1 ENSG00000225428.1 AC108479.1 chr2 87968609 87968971 + processed_pseudogene KNOWN OTTHUMG00000151561.1 363 363 1 ENSG00000233205.1 AC108479.2 chr2 87972656 87973082 + processed_pseudogene KNOWN OTTHUMG00000151562.1 427 427 1 ENSG00000275597.1 RP11-1378G18.1 chr2 87980714 87992858 - unprocessed_pseudogene KNOWN OTTHUMG00000187608.1 12145 601 5 ENSG00000187634.9 SAMD11 chr1 924880 944581 + protein_coding KNOWN OTTHUMG00000040719.8 19702 3214 153 ENSG00000142794.17 NBPF3 chr1 21440128 21485005 + protein_coding KNOWN OTTHUMG00000002944.7 44878 6812 127 ENSG00000222724.1 RNU2-63P chr2 88016354 88016547 - snRNA KNOWN NA 194 194 1 ENSG00000172086.7 KRCC1 chr2 88027205 88055729 - protein_coding KNOWN OTTHUMG00000130315.1 28525 1753 4 ENSG00000275955.1 AC108479.3 chr2 88055665 88055791 - miRNA NOVEL NA 127 127 1 ENSG00000115593.13 SMYD1 chr2 88067780 88113387 + protein_coding KNOWN OTTHUMG00000155045.2 45608 4600 26 ENSG00000265003.1 MIR4780 chr2 88082519 88082599 - miRNA KNOWN NA 81 81 1 ENSG00000163586.8 FABP1 chr2 88122982 88128116 - protein_coding KNOWN OTTHUMG00000130312.4 5135 2470 13 ENSG00000144115.15 THNSL2 chr2 88170295 88186636 + protein_coding KNOWN OTTHUMG00000130314.2 16342 6431 51 ENSG00000221619.2 AC012671.1 chr2 88294592 88294679 + miRNA NOVEL NA 88 88 1 ENSG00000232508.1 MRPL45P1 chr2 88364695 88365608 - processed_pseudogene KNOWN OTTHUMG00000155050.2 914 914 1 ENSG00000266309.1 AC012671.3 chr2 88374139 88374239 + miRNA NOVEL NA 101 101 1 ENSG00000176378.8 PFN1P10 chr1 21459756 21460082 - processed_pseudogene KNOWN OTTHUMG00000002948.2 327 327 1 ENSG00000212133.1 RNU6-1168P chr2 88383494 88383597 - snRNA KNOWN NA 104 104 1 ENSG00000252395.2 RNU6-1007P chr2 88414898 88415004 - snRNA KNOWN NA 107 107 1 ENSG00000224291.1 AC012671.2 chr2 88428078 88428615 + processed_pseudogene KNOWN OTTHUMG00000155051.1 538 203 2 ENSG00000214336.4 FOXI3 chr2 88446787 88452656 - protein_coding KNOWN OTTHUMG00000155048.5 5870 2804 2 ENSG00000274377.1 AC012671.4 chr2 88462767 88462867 - miRNA NOVEL NA 101 101 1 ENSG00000172073.3 TEX37 chr2 88524651 88529584 + protein_coding KNOWN OTTHUMG00000130332.1 4934 795 4 ENSG00000225420.1 AC104134.2 chr2 88538720 88575610 + antisense NOVEL OTTHUMG00000155047.1 36891 1747 3 ENSG00000172071.10 EIF2AK3 chr2 88556741 88627576 - protein_coding KNOWN OTTHUMG00000155046.2 70836 5434 59 ENSG00000234028.3 AC062029.1 chr2 88627539 88631821 + antisense NOVEL OTTHUMG00000155049.3 4283 4283 3 ENSG00000153574.8 RPIA chr2 88691644 88750935 + protein_coding KNOWN OTTHUMG00000130333.2 59292 1848 9 ENSG00000162551.12 ALPL chr1 21509372 21578412 + protein_coding KNOWN OTTHUMG00000002949.2 69041 3007 58 ENSG00000230006.6 ANKRD36BP2 chr2 88765807 88806612 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000151690.4 40806 8042 59 ENSG00000221686.1 AC244205.1 chr2 88767318 88767413 + miRNA NOVEL NA 96 96 1 ENSG00000240040.4 AC096579.13 chr2 88811186 88861563 - lincRNA NOVEL OTTHUMG00000151694.3 50378 937 5 ENSG00000265510.1 MIR4436A chr2 88812370 88812454 + miRNA KNOWN NA 85 85 1 ENSG00000211592.5 IGKC chr2 88857161 89245596 - IG_C_gene KNOWN OTTHUMG00000151684.1 388436 2145 20 ENSG00000241351.2 IGKV3-11 chr2 88857361 89027731 - IG_V_gene KNOWN OTTHUMG00000151633.1 170371 753 6 ENSG00000240671.2 IGKV1-8 chr2 88857361 88992931 - IG_V_gene KNOWN OTTHUMG00000151634.1 135571 758 6 ENSG00000211593.2 IGKJ5 chr2 88860568 88860605 - IG_J_gene KNOWN OTTHUMG00000151676.1 38 38 1 ENSG00000211594.2 IGKJ4 chr2 88860886 88860922 - IG_J_gene KNOWN OTTHUMG00000151695.1 37 37 1 ENSG00000211595.2 IGKJ3 chr2 88861221 88861258 - IG_J_gene KNOWN OTTHUMG00000151680.1 38 38 1 ENSG00000233431.1 RP11-63N8.3 chr1 21586472 21591187 + antisense NOVEL OTTHUMG00000037843.1 4716 821 2 ENSG00000211596.3 IGKJ2 chr2 88861525 88861563 - IG_J_gene KNOWN OTTHUMG00000151691.3 39 39 1 ENSG00000211597.2 IGKJ1 chr2 88861886 88861923 - IG_J_gene KNOWN OTTHUMG00000151679.1 38 38 1 ENSG00000211598.2 IGKV4-1 chr2 88885397 88886153 + IG_V_gene KNOWN OTTHUMG00000151533.2 757 538 2 ENSG00000211599.2 IGKV5-2 chr2 88897232 88897784 + IG_V_gene KNOWN OTTHUMG00000151535.2 553 408 2 ENSG00000197794.2 IGKV7-3 chr2 88915081 88915378 - IG_V_pseudogene KNOWN OTTHUMG00000151534.1 298 298 1 ENSG00000225136.1 PGBD4P5 chr2 88922328 88922753 - processed_pseudogene KNOWN OTTHUMG00000151537.1 426 426 1 ENSG00000253435.1 IGKV2-4 chr2 88931666 88932380 - IG_V_pseudogene KNOWN OTTHUMG00000151536.1 715 340 2 ENSG00000243466.1 IGKV1-5 chr2 88947301 88947957 - IG_V_gene KNOWN OTTHUMG00000151560.1 657 532 2 ENSG00000239855.1 IGKV1-6 chr2 88966262 88966767 - IG_V_gene KNOWN OTTHUMG00000151559.3 506 380 2 ENSG00000243063.1 IGKV3-7 chr2 88978468 88979081 - IG_V_gene KNOWN OTTHUMG00000151636.1 614 445 2 ENSG00000221781.1 AL359815.1 chr1 21592411 21592548 - miRNA NOVEL NA 138 138 1 ENSG00000241755.1 IGKV1-9 chr2 89009982 89010515 - IG_V_gene KNOWN OTTHUMG00000151637.1 534 409 2 ENSG00000253278.1 IGKV2-10 chr2 89019992 89020686 - IG_V_pseudogene KNOWN OTTHUMG00000151635.1 695 351 2 ENSG00000243290.1 IGKV1-12 chr2 89040224 89040745 - IG_V_gene KNOWN OTTHUMG00000151643.1 522 398 2 ENSG00000253497.1 IGKV1-13 chr2 89045995 89046466 - IG_V_pseudogene KNOWN OTTHUMG00000151647.1 472 347 2 ENSG00000253265.1 IGKV2-14 chr2 89078010 89078784 - IG_V_pseudogene KNOWN OTTHUMG00000151642.1 775 347 2 ENSG00000244437.1 IGKV3-15 chr2 89085177 89085787 - IG_V_gene KNOWN OTTHUMG00000151653.1 611 442 2 ENSG00000240864.3 IGKV1-16 chr2 89099859 89100361 - IG_V_gene KNOWN OTTHUMG00000151649.1 503 378 2 ENSG00000240382.3 IGKV1-17 chr2 89117342 89117844 - IG_V_gene KNOWN OTTHUMG00000151650.1 503 378 2 ENSG00000254157.1 IGKV2-18 chr2 89128724 89129483 - IG_V_pseudogene KNOWN OTTHUMG00000151644.1 760 343 2 ENSG00000253732.1 IGKV2-19 chr2 89134975 89135257 - IG_V_pseudogene KNOWN OTTHUMG00000151651.1 283 283 1 ENSG00000076864.18 RAP1GAP chr1 21596215 21669363 - protein_coding KNOWN OTTHUMG00000007513.11 73149 5755 235 ENSG00000239951.1 IGKV3-20 chr2 89142574 89143160 - IG_V_gene KNOWN OTTHUMG00000151639.1 587 400 2 ENSG00000211611.2 IGKV6-21 chr2 89159751 89160366 - IG_V_gene KNOWN OTTHUMG00000151654.1 616 406 2 ENSG00000253578.1 IGKV1-22 chr2 89170775 89171212 - IG_V_pseudogene KNOWN OTTHUMG00000151646.2 438 326 2 ENSG00000253625.1 IGKV2-23 chr2 89172022 89172553 - IG_V_pseudogene KNOWN OTTHUMG00000151638.1 532 323 2 ENSG00000241294.1 IGKV2-24 chr2 89176328 89177160 - IG_V_gene KNOWN OTTHUMG00000151655.1 833 390 2 ENSG00000253202.1 IGKV3-25 chr2 89192500 89192752 - IG_V_pseudogene KNOWN OTTHUMG00000151645.1 253 253 1 ENSG00000254098.1 IGKV2-26 chr2 89196096 89196829 - IG_V_pseudogene KNOWN OTTHUMG00000151648.1 734 343 2 ENSG00000277852.1 RP11-421K23.1 chr2 89203509 89203906 - unprocessed_pseudogene KNOWN OTTHUMG00000187609.1 398 398 1 ENSG00000244575.3 IGKV1-27 chr2 89213423 89213928 - IG_V_gene KNOWN OTTHUMG00000151640.1 506 382 2 ENSG00000244116.3 IGKV2-28 chr2 89221698 89222461 - IG_V_gene KNOWN OTTHUMG00000151652.1 764 390 2 ENSG00000090686.14 USP48 chr1 21678298 21783606 - protein_coding KNOWN OTTHUMG00000007798.3 105309 9497 143 ENSG00000253998.3 IGKV2-29 chr2 89234174 89234912 - IG_V_pseudogene KNOWN OTTHUMG00000151641.1 739 372 2 ENSG00000243238.1 IGKV2-30 chr2 89244781 89245596 - IG_V_gene KNOWN OTTHUMG00000151692.1 816 390 2 ENSG00000253158.1 IGKV3-31 chr2 89252211 89252736 - IG_V_pseudogene KNOWN OTTHUMG00000151688.1 526 329 2 ENSG00000253870.1 IGKV1-32 chr2 89253571 89254015 - IG_V_pseudogene KNOWN OTTHUMG00000151687.1 445 311 2 ENSG00000242076.2 IGKV1-33 chr2 89266494 89268506 - IG_V_gene KNOWN OTTHUMG00000151682.1 2013 421 4 ENSG00000253860.1 IGKV3-34 chr2 89275298 89275787 - IG_V_pseudogene KNOWN OTTHUMG00000151693.1 490 293 2 ENSG00000253461.1 IGKV1-35 chr2 89286689 89286973 - IG_V_pseudogene KNOWN OTTHUMG00000151681.1 285 285 1 ENSG00000253487.1 IGKV2-36 chr2 89295233 89295455 - IG_V_pseudogene KNOWN OTTHUMG00000151683.1 223 223 1 ENSG00000239862.1 IGKV1-37 chr2 89297264 89297785 - IG_V_gene KNOWN OTTHUMG00000151689.1 522 398 2 ENSG00000253592.1 IGKV2-38 chr2 89309898 89310144 - IG_V_pseudogene KNOWN OTTHUMG00000151685.1 247 247 1 ENSG00000281866.1 U7 chr1 21741140 21741195 + snRNA NOVEL NA 56 56 1 ENSG00000242371.1 IGKV1-39 chr2 89319625 89320146 - IG_V_gene KNOWN OTTHUMG00000151678.1 522 398 2 ENSG00000273962.1 IGKV2-40 chr2 89330110 89330429 - IG_V_gene KNOWN OTTHUMG00000188265.1 320 320 2 ENSG00000276861.1 5S_rRNA chr2 89600571 89600680 + rRNA NOVEL NA 110 110 1 ENSG00000251039.2 IGKV2D-40 chr2 89851791 89852497 + IG_V_gene KNOWN OTTHUMG00000159963.1 707 336 3 ENSG00000251546.1 IGKV1D-39 chr2 89862482 89862981 + IG_V_gene KNOWN OTTHUMG00000159962.1 500 376 2 ENSG00000254009.1 IGKV2D-38 chr2 89872463 89872702 + IG_V_pseudogene KNOWN OTTHUMG00000159961.1 240 240 1 ENSG00000250036.1 IGKV1D-37 chr2 89884740 89885216 + IG_V_gene KNOWN OTTHUMG00000159960.1 477 353 2 ENSG00000253127.1 IGKV2D-36 chr2 89887022 89887247 + IG_V_pseudogene KNOWN OTTHUMG00000151611.1 226 226 1 ENSG00000232747.2 IGKV1D-35 chr2 89895502 89895772 + IG_V_pseudogene KNOWN OTTHUMG00000151603.1 271 271 1 ENSG00000253501.1 IGKV3D-34 chr2 89906757 89907246 + IG_V_pseudogene KNOWN OTTHUMG00000151601.1 490 302 2 ENSG00000231978.2 RP11-132G19.3 chr1 21768269 21768575 + processed_pseudogene KNOWN OTTHUMG00000007797.2 307 307 1 ENSG00000239975.2 IGKV1D-33 chr2 89913982 89916052 + IG_V_gene KNOWN OTTHUMG00000151602.1 2071 479 4 ENSG00000253191.1 IGKV1D-32 chr2 89928422 89928867 + IG_V_pseudogene KNOWN OTTHUMG00000151614.1 446 318 2 ENSG00000253999.1 IGKV3D-31 chr2 89929701 89930202 + IG_V_pseudogene KNOWN OTTHUMG00000151612.1 502 281 2 ENSG00000239571.1 IGKV2D-30 chr2 89936859 89937679 + IG_V_gene KNOWN OTTHUMG00000151613.1 821 395 2 ENSG00000243264.2 IGKV2D-29 chr2 89947512 89948279 + IG_V_gene KNOWN OTTHUMG00000151619.1 768 400 3 ENSG00000242534.2 IGKV2D-28 chr2 89959979 89960754 + IG_V_gene KNOWN OTTHUMG00000151616.2 776 402 3 ENSG00000224607.4 IGKV1D-27 chr2 89968867 89969335 + IG_V_pseudogene KNOWN OTTHUMG00000151607.1 469 335 2 ENSG00000211623.2 IGKV2D-26 chr2 89985922 89986702 + IG_V_gene KNOWN OTTHUMG00000151606.2 781 390 2 ENSG00000254097.1 IGKV3D-25 chr2 89989987 89990221 + IG_V_pseudogene KNOWN OTTHUMG00000151609.1 235 235 1 ENSG00000241566.1 IGKV2D-24 chr2 90004797 90005629 + IG_V_gene KNOWN OTTHUMG00000151618.1 833 390 2 ENSG00000187942.10 LDLRAD2 chr1 21812265 21825221 + protein_coding KNOWN OTTHUMG00000002675.1 12957 4490 13 ENSG00000254345.1 IGKV2D-23 chr2 90009402 90009927 + IG_V_pseudogene KNOWN OTTHUMG00000151605.1 526 286 2 ENSG00000253365.1 IGKV1D-22 chr2 90010741 90011184 + IG_V_pseudogene KNOWN OTTHUMG00000151604.1 444 324 2 ENSG00000225523.2 IGKV6D-21 chr2 90021567 90022185 + IG_V_gene KNOWN OTTHUMG00000151608.1 619 409 2 ENSG00000211625.2 IGKV3D-20 chr2 90038848 90039479 + IG_V_gene KNOWN OTTHUMG00000151615.1 632 445 2 ENSG00000253765.1 IGKV2D-19 chr2 90046796 90047057 + IG_V_pseudogene KNOWN OTTHUMG00000151617.1 262 262 1 ENSG00000254220.1 IGKV2D-18 chr2 90052581 90053372 + IG_V_pseudogene KNOWN OTTHUMG00000151620.1 792 375 2 ENSG00000211626.2 IGKV6D-41 chr2 90069662 90070238 + IG_V_gene KNOWN OTTHUMG00000151621.1 577 371 2 ENSG00000242766.1 IGKV1D-17 chr2 90082635 90083291 + IG_V_gene KNOWN OTTHUMG00000151610.1 657 532 2 ENSG00000279831.1 AC243981.1 chr2 90099156 90099391 - pseudogene NOVEL NA 236 234 2 ENSG00000241244.1 IGKV1D-16 chr2 90100236 90100738 + IG_V_gene KNOWN OTTHUMG00000151569.2 503 378 2 ENSG00000268020.3 OR4G4P chr1 52473 53312 + unprocessed_pseudogene KNOWN OTTHUMG00000185779.1 840 840 1 ENSG00000188976.9 NOC2L chr1 944204 959309 - protein_coding KNOWN OTTHUMG00000040720.1 15106 5539 52 ENSG00000142798.15 HSPG2 chr1 21822245 21937297 - protein_coding KNOWN OTTHUMG00000002674.6 115053 17666 154 ENSG00000224041.3 IGKV3D-15 chr2 90114838 90115402 + IG_V_gene KNOWN OTTHUMG00000151568.4 565 396 2 ENSG00000211632.3 IGKV3D-11 chr2 90114902 90173414 + IG_V_gene KNOWN OTTHUMG00000151563.4 58513 478 4 ENSG00000254292.1 IGKV2D-14 chr2 90121786 90122564 + IG_V_pseudogene KNOWN OTTHUMG00000151565.1 779 355 2 ENSG00000276566.1 IGKV1D-13 chr2 90154073 90154574 + IG_V_gene KNOWN OTTHUMG00000188271.1 502 376 2 ENSG00000278857.1 IGKV1D-12 chr2 90159840 90160335 + IG_V_gene KNOWN OTTHUMG00000188272.1 496 371 2 ENSG00000253906.1 IGKV2D-10 chr2 90179889 90180587 + IG_V_pseudogene KNOWN OTTHUMG00000151567.1 699 281 2 ENSG00000211633.3 IGKV1D-42 chr2 90190193 90190681 + IG_V_gene KNOWN OTTHUMG00000151573.3 489 373 2 ENSG00000242580.1 IGKV1D-43 chr2 90209873 90210529 + IG_V_gene KNOWN OTTHUMG00000151572.2 657 532 2 ENSG00000239819.2 IGKV1D-8 chr2 90220727 90221384 + IG_V_gene KNOWN OTTHUMG00000151570.4 658 534 2 ENSG00000228325.5 IGKV3D-7 chr2 90234812 90235370 + IG_V_gene KNOWN OTTHUMG00000184555.3 559 384 2 ENSG00000232037.3 RP11-26H16.1 chr1 21908098 21908580 + processed_pseudogene KNOWN OTTHUMG00000002673.1 483 483 1 ENSG00000275490.1 CH17-132F21.4 chr2 90309230 90309333 + unprocessed_pseudogene KNOWN OTTHUMG00000188274.1 104 104 1 ENSG00000270999.1 IGKV1OR2-118 chr2 90315366 90315836 - IG_V_pseudogene KNOWN OTTHUMG00000184560.1 471 347 2 ENSG00000265897.2 AC018696.1 chr2 90359809 90360032 - processed_pseudogene KNOWN OTTHUMG00000188275.1 224 224 1 ENSG00000281904.1 CH17-132F21.5 chr2 90365737 90367699 + lincRNA NOVEL OTTHUMG00000189798.1 1963 1963 1 ENSG00000230964.1 AC018696.4 chr2 91578478 91578573 + processed_pseudogene KNOWN OTTHUMG00000155075.3 96 96 1 ENSG00000261600.1 RP11-575H3.1 chr2 91580336 91580863 + lincRNA NOVEL OTTHUMG00000176044.2 528 528 1 ENSG00000278131.1 AC116050.1 chr2 91589494 91621421 + unprocessed_pseudogene KNOWN OTTHUMG00000155071.3 31928 1779 5 ENSG00000143429.8 AC027612.6 chr2 91617160 91659972 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155083.2 42813 3065 19 ENSG00000222835.1 RNA5SP100 chr2 91674857 91674966 + rRNA KNOWN NA 110 110 1 ENSG00000184303.5 DRD5P1 chr2 91684447 91685884 - processed_pseudogene KNOWN OTTHUMG00000155074.1 1438 1438 1 ENSG00000219073.6 CELA3B chr1 21977021 21998642 + protein_coding KNOWN OTTHUMG00000002758.2 21622 1541 22 ENSG00000230572.4 AC027612.3 chr2 91686102 91714745 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155070.1 28644 1532 18 ENSG00000271627.1 RP11-165D20.1 chr2 91723023 91723605 + processed_pseudogene KNOWN OTTHUMG00000184281.1 583 583 1 ENSG00000223703.1 AC027612.4 chr2 91736726 91767439 + unprocessed_pseudogene KNOWN OTTHUMG00000155080.1 30714 2395 6 ENSG00000232531.3 AC027612.1 chr2 91747940 91748986 - processed_pseudogene KNOWN OTTHUMG00000150478.1 1047 1047 1 ENSG00000238320.1 AC027612.2 chr2 91763925 91764018 + miRNA NOVEL NA 94 94 1 ENSG00000236969.2 GGT8P chr2 91775944 91781169 + unprocessed_pseudogene KNOWN OTTHUMG00000155086.2 5226 532 3 ENSG00000235235.6 IGKV1OR2-1 chr2 91817771 91818248 + IG_V_pseudogene KNOWN OTTHUMG00000155081.2 478 354 2 ENSG00000214330.4 ABCD1P5 chr2 91840601 91843802 + unprocessed_pseudogene KNOWN OTTHUMG00000155089.1 3202 754 3 ENSG00000237085.2 AC127391.3 chr2 91859384 91859481 + processed_pseudogene KNOWN OTTHUMG00000155079.3 98 98 1 ENSG00000227497.1 PABPC1P6 chr2 91877969 91880195 + processed_pseudogene KNOWN OTTHUMG00000155088.1 2227 1829 2 ENSG00000273610.1 Metazoa_SRP chr1 21987481 21987777 + misc_RNA NOVEL NA 297 297 1 ENSG00000214329.6 SLC9B1P2 chr2 91883076 91931714 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155082.2 48639 1184 11 ENSG00000226481.3 ACTR3BP2 chr2 91940668 91942040 + processed_pseudogene KNOWN OTTHUMG00000155085.1 1373 1373 1 ENSG00000234898.1 CHEK2P3 chr2 91957436 91963610 + unprocessed_pseudogene KNOWN OTTHUMG00000155087.1 6175 248 3 ENSG00000235147.1 AC128677.3 chr2 92006680 92007121 - processed_pseudogene KNOWN OTTHUMG00000155084.1 442 442 1 ENSG00000223816.5 IGKV1OR2-2 chr2 92034522 92035000 - unprocessed_pseudogene KNOWN OTTHUMG00000155090.2 479 355 2 ENSG00000261522.4 RP11-407P15.1 chr2 94575976 94587183 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000175551.1 11208 2028 6 ENSG00000259916.1 RP11-407P15.2 chr2 94588522 94604573 + protein_coding NOVEL OTTHUMG00000175552.1 16052 1044 7 ENSG00000237383.1 CNN2P11 chr2 94725674 94725935 - processed_pseudogene KNOWN OTTHUMG00000155140.1 262 262 1 ENSG00000227265.2 AC073464.4 chr2 94734655 94735844 - processed_pseudogene KNOWN OTTHUMG00000155134.2 1190 1190 1 ENSG00000213355.3 CNN2P8 chr2 94737337 94738249 + processed_pseudogene KNOWN OTTHUMG00000155130.1 913 913 1 ENSG00000201919.1 RNU6-1022P chr1 21987816 21987919 + snRNA KNOWN NA 104 104 1 ENSG00000234837.1 AC073464.6 chr2 94750582 94751293 + processed_pseudogene KNOWN OTTHUMG00000155132.1 712 712 1 ENSG00000223564.1 CYP4F32P chr2 94759259 94760279 - unprocessed_pseudogene KNOWN OTTHUMG00000155129.1 1021 504 3 ENSG00000232502.1 AC073464.7 chr2 94760774 94761116 - processed_pseudogene KNOWN OTTHUMG00000155139.1 343 343 1 ENSG00000235571.1 SNX18P14 chr2 94786688 94787261 - processed_pseudogene KNOWN OTTHUMG00000155128.1 574 574 1 ENSG00000204717.4 AC073464.11 chr2 94795808 94806452 - unprocessed_pseudogene KNOWN OTTHUMG00000155131.1 10645 534 3 ENSG00000229089.5 ANKRD20A8P chr2 94811046 94857282 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155138.2 46237 7042 32 ENSG00000212140.1 RNU6-1320P chr2 94846533 94846639 - snRNA KNOWN NA 107 107 1 ENSG00000278631.1 RP11-71B7.1 chr2 94861362 94862667 + processed_pseudogene KNOWN OTTHUMG00000187611.1 1306 1306 1 ENSG00000259848.7 AC097374.2 chr2 94867486 94947341 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155135.3 79856 7136 20 ENSG00000163060.7 TEKT4 chr2 94871433 94876829 + protein_coding KNOWN OTTHUMG00000130396.2 5397 2218 12 ENSG00000142789.18 CELA3A chr1 22001656 22012539 + protein_coding KNOWN OTTHUMG00000002755.2 10884 1224 16 ENSG00000237055.1 AC097374.3 chr2 94899566 94900661 - processed_pseudogene KNOWN OTTHUMG00000155136.1 1096 1096 1 ENSG00000232128.1 AC097374.4 chr2 94900990 94901602 + processed_pseudogene KNOWN OTTHUMG00000155133.1 613 613 1 ENSG00000233158.1 RPS24P6 chr2 94912432 94912831 + processed_pseudogene KNOWN OTTHUMG00000155141.1 400 400 1 ENSG00000231331.1 AC103563.2 chr2 94953161 94953593 - unprocessed_pseudogene KNOWN OTTHUMG00000155137.1 433 354 2 ENSG00000232594.1 AC103563.3 chr2 94961047 94961503 - unprocessed_pseudogene KNOWN OTTHUMG00000155164.1 457 368 2 ENSG00000233105.1 AC103563.4 chr2 94964473 94964836 - unprocessed_pseudogene KNOWN OTTHUMG00000155163.1 364 364 1 ENSG00000224585.1 AC103563.5 chr2 94971954 94972167 - unprocessed_pseudogene KNOWN OTTHUMG00000155152.1 214 123 2 ENSG00000233447.1 AC103563.6 chr2 94974544 94974838 - unprocessed_pseudogene KNOWN OTTHUMG00000155160.1 295 295 1 ENSG00000235186.1 AC103563.7 chr2 94991880 94994362 + unprocessed_pseudogene KNOWN OTTHUMG00000155167.1 2483 318 2 ENSG00000277591.1 Metazoa_SRP chr2 95003545 95003843 - misc_RNA NOVEL NA 299 299 1 ENSG00000278124.1 Metazoa_SRP chr1 22010650 22010946 + misc_RNA NOVEL NA 297 297 1 ENSG00000233850.1 AC103563.8 chr2 95025193 95026709 - antisense NOVEL OTTHUMG00000155157.1 1517 478 3 ENSG00000172005.9 MAL chr2 95025677 95053996 + protein_coding KNOWN OTTHUMG00000132011.4 28320 1457 14 ENSG00000231062.1 AC103563.9 chr2 95051395 95053176 - antisense NOVEL OTTHUMG00000155169.1 1782 597 2 ENSG00000144029.10 MRPS5 chr2 95087207 95149434 - protein_coding KNOWN OTTHUMG00000130394.2 62228 6719 48 ENSG00000144026.10 ZNF514 chr2 95147330 95165413 - protein_coding KNOWN OTTHUMG00000130391.3 18084 6813 16 ENSG00000275111.3 ZNF2 chr2 95165432 95184317 + protein_coding KNOWN OTTHUMG00000155150.4 18886 3996 21 ENSG00000275768.1 RP11-11P22.1 chr2 95196449 95197357 - unprocessed_pseudogene KNOWN OTTHUMG00000187613.1 909 909 1 ENSG00000233757.5 AC092835.2 chr2 95207535 95259774 + protein_coding NOVEL OTTHUMG00000155176.4 52240 2304 13 ENSG00000155066.14 PROM2 chr2 95274453 95291308 + protein_coding KNOWN OTTHUMG00000130393.2 16856 6063 140 ENSG00000115041.11 KCNIP3 chr2 95297304 95386083 + protein_coding KNOWN OTTHUMG00000130392.3 88780 7870 41 ENSG00000201273.1 RNU6-776P chr1 22010985 22011088 + snRNA KNOWN NA 104 104 1 ENSG00000235129.1 FABP7P2 chr2 95368507 95368885 - processed_pseudogene KNOWN OTTHUMG00000155162.1 379 379 1 ENSG00000115042.8 FAHD2A chr2 95402721 95416616 + protein_coding KNOWN OTTHUMG00000130397.2 13896 5665 30 ENSG00000248821.1 AC009238.6 chr2 95413456 95414296 - unprocessed_pseudogene KNOWN OTTHUMG00000155175.1 841 217 3 ENSG00000233275.1 AC009238.8 chr2 95434759 95435113 + processed_pseudogene KNOWN OTTHUMG00000155149.1 355 355 1 ENSG00000227120.1 AC009238.7 chr2 95436133 95436556 + processed_pseudogene KNOWN OTTHUMG00000155165.1 424 424 1 ENSG00000204705.3 UBTFL5 chr2 95450310 95451500 - unprocessed_pseudogene KNOWN OTTHUMG00000155173.1 1191 1191 1 ENSG00000277747.1 RP11-404J24.1 chr2 95460144 95460336 - unprocessed_pseudogene KNOWN OTTHUMG00000187615.1 193 193 1 ENSG00000234903.1 AC133104.2 chr2 95468863 95469778 - unprocessed_pseudogene KNOWN OTTHUMG00000155153.1 916 218 2 ENSG00000144010.8 TRIM43B chr2 95477164 95482714 - unprocessed_pseudogene KNOWN OTTHUMG00000155170.1 5551 1341 6 ENSG00000238162.1 AC009237.4 chr2 95485541 95485805 + processed_pseudogene KNOWN OTTHUMG00000155147.1 265 265 1 ENSG00000228397.1 RP1-224A6.3 chr1 22023994 22024968 - lincRNA NOVEL OTTHUMG00000002754.1 975 615 2 ENSG00000223917.1 AC009237.2 chr2 95486480 95488627 - unprocessed_pseudogene KNOWN OTTHUMG00000155159.1 2148 744 3 ENSG00000237308.1 AC009237.5 chr2 95496022 95496531 - processed_pseudogene KNOWN OTTHUMG00000155166.1 510 510 1 ENSG00000224719.1 AC009237.6 chr2 95502791 95505059 + unprocessed_pseudogene KNOWN OTTHUMG00000155154.1 2269 284 2 ENSG00000226185.1 TRIM64FP chr2 95514827 95520107 + unprocessed_pseudogene KNOWN OTTHUMG00000155177.1 5281 1336 7 ENSG00000272913.1 RP11-440D17.3 chr2 95525109 95526702 - lincRNA NOVEL OTTHUMG00000186024.1 1594 1594 1 ENSG00000229689.3 AC009237.8 chr2 95525345 95532405 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155156.3 7061 4978 6 ENSG00000236431.1 AC009237.11 chr2 95536117 95536495 - processed_pseudogene KNOWN OTTHUMG00000155158.1 379 379 1 ENSG00000273305.1 RP11-440D17.4 chr2 95537969 95538469 + lincRNA NOVEL OTTHUMG00000186025.1 501 501 1 ENSG00000233037.2 AC009237.10 chr2 95542730 95543230 - processed_pseudogene KNOWN OTTHUMG00000155172.2 501 501 1 ENSG00000168992.4 OR7E102P chr2 95546531 95547545 + unprocessed_pseudogene KNOWN OTTHUMG00000155151.1 1015 1015 1 ENSG00000218510.5 LINC00339 chr1 22025188 22031223 + lincRNA NOVEL OTTHUMG00000002757.2 6036 1424 12 ENSG00000232717.1 TRIM51JP chr2 95574899 95580764 + unprocessed_pseudogene KNOWN OTTHUMG00000155155.1 5866 1320 6 ENSG00000274028.1 RP11-440D17.5 chr2 95588149 95589253 + unprocessed_pseudogene KNOWN OTTHUMG00000187616.1 1105 506 2 ENSG00000230083.1 AC009237.13 chr2 95590969 95591206 - processed_pseudogene KNOWN OTTHUMG00000155171.1 238 238 1 ENSG00000144015.4 TRIM43 chr2 95592018 95599778 + protein_coding KNOWN OTTHUMG00000130401.1 7761 1682 7 ENSG00000236026.1 AC009237.14 chr2 95606924 95607152 + processed_pseudogene KNOWN OTTHUMG00000155174.1 229 229 1 ENSG00000271003.1 RP11-440D17.1 chr2 95607073 95616592 + unprocessed_pseudogene KNOWN OTTHUMG00000184279.1 9520 276 2 ENSG00000270193.1 RP11-440D17.2 chr2 95616492 95617233 + processed_pseudogene KNOWN OTTHUMG00000184280.1 742 742 1 ENSG00000204699.4 UBTFL3 chr2 95625213 95626236 + unprocessed_pseudogene KNOWN OTTHUMG00000155161.2 1024 1024 1 ENSG00000275497.1 RP11-440D17.6 chr2 95633850 95636106 + unprocessed_pseudogene KNOWN OTTHUMG00000187618.1 2257 748 2 ENSG00000235959.1 AC009237.17 chr2 95640181 95640604 - processed_pseudogene KNOWN OTTHUMG00000155168.1 424 424 1 ENSG00000187961.12 KLHL17 chr1 960587 965715 + protein_coding KNOWN OTTHUMG00000040721.6 5129 3395 31 ENSG00000070831.14 CDC42 chr1 22052627 22092946 + protein_coding KNOWN OTTHUMG00000002753.4 40320 3598 31 ENSG00000236750.1 AC009237.16 chr2 95641634 95641980 - processed_pseudogene KNOWN OTTHUMG00000155148.1 347 347 1 ENSG00000235584.2 AC008268.1 chr2 95666084 95668715 + lincRNA NOVEL OTTHUMG00000155185.2 2632 1119 2 ENSG00000237510.6 AC008268.2 chr2 95789654 95800166 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155187.1 10513 2245 23 ENSG00000232931.4 LINC00342 chr2 95807118 95816215 - lincRNA NOVEL OTTHUMG00000155186.1 9098 2618 7 ENSG00000174501.13 ANKRD36C chr2 95836919 95991831 - protein_coding KNOWN OTTHUMG00000155211.2 154913 8574 223 ENSG00000275961.1 Metazoa_SRP chr2 96004563 96004850 - misc_RNA NOVEL NA 288 288 1 ENSG00000231584.7 FAHD2CP chr2 96010551 96023380 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155210.3 12830 2140 28 ENSG00000186281.11 GPAT2 chr2 96021946 96039451 - protein_coding KNOWN OTTHUMG00000155208.1 17506 5684 153 ENSG00000274286.1 ADRA2B chr2 96112875 96116245 - protein_coding KNOWN OTTHUMG00000188276.1 3371 3371 1 ENSG00000188886.3 ASTL chr2 96123850 96138436 - protein_coding KNOWN OTTHUMG00000155212.1 14587 1654 12 ENSG00000230068.2 CDC42-IT1 chr1 22059197 22064199 + sense_intronic NOVEL OTTHUMG00000002890.2 5003 692 2 ENSG00000158050.4 DUSP2 chr2 96143166 96145440 - protein_coding KNOWN OTTHUMG00000130456.2 2275 1932 6 ENSG00000228873.1 AC012307.2 chr2 96145602 96147012 - lincRNA NOVEL OTTHUMG00000155213.1 1411 197 2 ENSG00000084090.12 STARD7 chr2 96184859 96208825 - protein_coding KNOWN OTTHUMG00000130457.3 23967 4414 26 ENSG00000204685.6 STARD7-AS1 chr2 96208416 96242621 + processed_transcript NOVEL OTTHUMG00000155209.1 34206 2349 6 ENSG00000135956.7 TMEM127 chr2 96248516 96265994 - protein_coding KNOWN OTTHUMG00000130454.4 17479 6367 11 ENSG00000144021.2 CIAO1 chr2 96266132 96273349 + protein_coding KNOWN OTTHUMG00000130452.2 7218 4031 18 ENSG00000144028.13 SNRNP200 chr2 96274336 96305515 - protein_coding KNOWN OTTHUMG00000130455.4 31180 10926 97 ENSG00000230747.1 AC021188.4 chr2 96307263 96321731 - antisense NOVEL OTTHUMG00000155228.1 14469 740 2 ENSG00000198885.8 ITPRIPL1 chr2 96325331 96330517 + protein_coding KNOWN OTTHUMG00000155230.2 5187 4652 10 ENSG00000121152.8 NCAPH chr2 96335787 96373845 + protein_coding KNOWN OTTHUMG00000130451.4 38059 3278 88 ENSG00000271428.1 RP1-224A6.8 chr1 22068340 22068827 - processed_pseudogene KNOWN OTTHUMG00000184273.1 488 488 1 ENSG00000163121.8 NEURL3 chr2 96497643 96508109 - protein_coding KNOWN OTTHUMG00000128645.7 10467 2497 16 ENSG00000235480.1 RP11-363D14.1 chr2 96527940 96532306 - antisense NOVEL OTTHUMG00000156116.1 4367 440 3 ENSG00000196843.14 ARID5A chr2 96536743 96552638 + protein_coding KNOWN OTTHUMG00000155229.4 15896 3565 33 ENSG00000114982.16 KANSL3 chr2 96593170 96642787 - protein_coding KNOWN OTTHUMG00000155249.4 49618 9015 209 ENSG00000249715.8 FER1L5 chr2 96642737 96704887 + protein_coding KNOWN OTTHUMG00000154929.7 62151 10475 306 ENSG00000114988.10 LMAN2L chr2 96705929 96740064 - protein_coding KNOWN OTTHUMG00000130453.2 34136 2709 62 ENSG00000158158.10 CNNM4 chr2 96760902 96811891 + protein_coding KNOWN OTTHUMG00000130532.2 50990 5105 20 ENSG00000264157.2 AC092636.1 chr2 96798268 96798378 + miRNA NOVEL NA 111 111 1 ENSG00000280510.1 AC092636.2 chr2 96809473 96809614 + miRNA NOVEL NA 142 142 1 ENSG00000273265.1 RP11-353K11.1 chr2 96812239 96813657 - lincRNA NOVEL OTTHUMG00000186027.1 1419 415 2 ENSG00000271840.1 RP1-224A6.9 chr1 22100613 22101360 + lincRNA NOVEL OTTHUMG00000185691.1 748 748 1 ENSG00000168763.14 CNNM3 chr2 96816245 96833911 + protein_coding KNOWN OTTHUMG00000130531.3 17667 4416 25 ENSG00000163126.13 ANKRD23 chr2 96824526 96857934 - protein_coding KNOWN OTTHUMG00000130534.3 33409 4116 48 ENSG00000213337.7 ANKRD39 chr2 96836611 96858095 - protein_coding KNOWN OTTHUMG00000130530.2 21485 5330 13 ENSG00000168758.9 SEMA4C chr2 96859716 96870757 - protein_coding KNOWN OTTHUMG00000130535.2 11042 6157 45 ENSG00000168754.12 FAM178B chr2 96875882 97018438 - protein_coding KNOWN OTTHUMG00000155257.4 142557 3970 62 ENSG00000274206.1 Metazoa_SRP chr2 96938923 96939203 + misc_RNA NOVEL NA 281 281 1 ENSG00000252845.1 RNA5SP101 chr2 96956708 96956815 - rRNA KNOWN NA 108 108 1 ENSG00000275094.1 RP11-219H23.1 chr2 97000436 97001593 - unprocessed_pseudogene KNOWN OTTHUMG00000187620.1 1158 484 2 ENSG00000273634.1 RP11-219H23.2 chr2 97008368 97009104 - processed_pseudogene KNOWN OTTHUMG00000187621.1 737 737 1 ENSG00000248134.1 AC079395.1 chr2 97018343 97018604 - unprocessed_pseudogene KNOWN OTTHUMG00000155333.1 262 262 1 ENSG00000162552.13 WNT4 chr1 22117305 22143969 - protein_coding KNOWN OTTHUMG00000002894.2 26665 4527 10 ENSG00000144188.9 TRIM43CP chr2 97025981 97031636 - unprocessed_pseudogene KNOWN OTTHUMG00000155327.1 5656 1028 5 ENSG00000230343.1 AC018892.8 chr2 97034442 97034706 + unprocessed_pseudogene KNOWN OTTHUMG00000155328.1 265 265 1 ENSG00000236847.1 AC018892.3 chr2 97035461 97037549 - unprocessed_pseudogene KNOWN OTTHUMG00000155329.1 2089 693 3 ENSG00000270748.1 IGKV2OR2-1 chr2 97046588 97046891 + IG_V_pseudogene KNOWN OTTHUMG00000155332.2 304 304 1 ENSG00000271402.1 IGKV2OR2-2 chr2 97050729 97051028 + IG_V_pseudogene KNOWN OTTHUMG00000155326.2 300 300 1 ENSG00000204670.7 IGKV1OR2-3 chr2 97060128 97060415 + IG_V_pseudogene KNOWN OTTHUMG00000155330.2 288 288 1 ENSG00000188383.8 AC018892.9 chr2 97081098 97083249 + unprocessed_pseudogene KNOWN OTTHUMG00000155331.1 2152 863 5 ENSG00000144199.10 FAHD2B chr2 97083583 97094882 - protein_coding KNOWN OTTHUMG00000130533.2 11300 2662 30 ENSG00000279791.1 RP11-499E14.1 chr2 97094935 97097433 + TEC KNOWN OTTHUMG00000176108.1 2499 2499 1 ENSG00000275655.1 Metazoa_SRP chr2 97100587 97100874 + misc_RNA NOVEL NA 288 288 1 ENSG00000266564.1 MIR4418 chr1 22266239 22266300 + miRNA KNOWN NA 62 62 1 ENSG00000135976.15 ANKRD36 chr2 97113496 97264521 + protein_coding KNOWN OTTHUMG00000155256.6 151026 9670 188 ENSG00000277701.3 RP11-734K23.9 chr2 97281904 97291780 + lincRNA NOVEL OTTHUMG00000188202.3 9877 3067 22 ENSG00000237837.1 AC159540.3 chr2 97301729 97304151 + lincRNA NOVEL OTTHUMG00000152992.1 2423 555 2 ENSG00000271351.1 IGKV1OR2-9 chr2 97322137 97322423 - IG_V_pseudogene KNOWN OTTHUMG00000184517.1 287 287 1 ENSG00000276050.1 IGKV2OR2-10 chr2 97331533 97331843 - IG_V_pseudogene KNOWN OTTHUMG00000188278.1 311 311 1 ENSG00000271015.1 IGKV2OR2-7 chr2 97335671 97335974 - IG_V_pseudogene KNOWN OTTHUMG00000184526.1 304 304 1 ENSG00000270252.1 IGKV3OR2-5 chr2 97348899 97349179 + IG_V_pseudogene KNOWN OTTHUMG00000184519.1 281 281 1 ENSG00000271569.1 IGKV1OR2-6 chr2 97355059 97355335 + IG_V_pseudogene KNOWN OTTHUMG00000184513.1 277 277 1 ENSG00000270450.1 IGKV2OR2-7D chr2 97372532 97372835 + IG_V_pseudogene KNOWN OTTHUMG00000184523.1 304 304 1 ENSG00000278537.1 IGKV2OR2-8 chr2 97376674 97376973 + IG_V_pseudogene KNOWN OTTHUMG00000188277.1 300 300 1 ENSG00000234397.3 RP11-415K20.1 chr1 22322840 22323331 - processed_pseudogene KNOWN OTTHUMG00000002895.1 492 492 1 ENSG00000270187.1 IGKV1OR2-11 chr2 97386082 97386368 + IG_V_pseudogene KNOWN OTTHUMG00000184518.1 287 287 1 ENSG00000230606.9 AC159540.1 chr2 97416165 97433527 - lincRNA NOVEL OTTHUMG00000152989.8 17363 5278 65 ENSG00000278766.2 AC159540.2 chr2 97421075 97434847 + lincRNA NOVEL OTTHUMG00000153001.5 13773 1295 7 ENSG00000196912.11 ANKRD36B chr2 97492663 97589965 - protein_coding KNOWN OTTHUMG00000130547.9 97303 6771 182 ENSG00000235833.1 AC159540.14 chr2 97523949 97524976 - processed_pseudogene KNOWN OTTHUMG00000153013.1 1028 1028 1 ENSG00000228970.6 UBTFL6 chr2 97636780 97637803 - unprocessed_pseudogene KNOWN OTTHUMG00000153012.2 1024 1024 1 ENSG00000135940.5 COX5B chr2 97646040 97648383 + protein_coding KNOWN OTTHUMG00000130548.2 2344 1441 16 ENSG00000115073.7 ACTR1B chr2 97655963 97664107 - protein_coding KNOWN OTTHUMG00000130549.4 8145 2892 20 ENSG00000228486.8 LINC01125 chr2 97664217 97703064 + antisense NOVEL OTTHUMG00000153062.8 38848 6501 309 ENSG00000201806.1 RNU4-8P chr2 97664591 97664731 - snRNA KNOWN NA 141 141 1 ENSG00000279625.1 RP11-415K20.2 chr1 22364630 22366482 - TEC KNOWN OTTHUMG00000175744.1 1853 1853 1 ENSG00000115085.12 ZAP70 chr2 97713560 97739862 + protein_coding KNOWN OTTHUMG00000153060.3 26303 5111 55 ENSG00000075568.15 TMEM131 chr2 97756333 97995891 - protein_coding KNOWN OTTHUMG00000153061.8 239559 12985 76 ENSG00000235734.4 HMGN1P36 chr2 97827248 97827545 + processed_pseudogene KNOWN OTTHUMG00000153063.2 298 298 1 ENSG00000238719.1 RNU7-96P chr2 97913054 97913117 - snRNA KNOWN NA 64 64 1 ENSG00000168658.17 VWA3B chr2 98087116 98313299 + protein_coding KNOWN OTTHUMG00000153104.3 226184 8307 250 ENSG00000231635.1 ATP5BP1 chr2 98206151 98207724 + processed_pseudogene KNOWN OTTHUMG00000153103.1 1574 1574 1 ENSG00000222000.6 AC092675.3 chr2 98331389 98356005 - antisense NOVEL OTTHUMG00000153102.1 24617 1164 11 ENSG00000144191.10 CNGA3 chr2 98346155 98398601 + protein_coding KNOWN OTTHUMG00000130561.3 52447 4378 32 ENSG00000227987.1 AC092675.4 chr2 98346995 98351140 + sense_intronic NOVEL OTTHUMG00000153105.1 4146 541 2 ENSG00000040933.14 INPP4A chr2 98444854 98594390 + protein_coding KNOWN OTTHUMG00000153106.3 149537 13187 152 ENSG00000184677.15 ZBTB40 chr1 22451851 22531157 + protein_coding KNOWN OTTHUMG00000002897.1 79307 8992 60 ENSG00000183513.7 COA5 chr2 98599310 98608515 - protein_coding KNOWN OTTHUMG00000153101.3 9206 2760 14 ENSG00000115446.10 UNC50 chr2 98608579 98618515 + protein_coding KNOWN OTTHUMG00000130562.2 9937 2230 24 ENSG00000071073.11 MGAT4A chr2 98619106 98731126 - protein_coding KNOWN OTTHUMG00000130563.4 112021 9630 80 ENSG00000236564.1 YWHAQP5 chr2 98694109 98695490 + processed_pseudogene KNOWN OTTHUMG00000153115.1 1382 1382 1 ENSG00000226791.5 AC109826.1 chr2 98761938 98772920 - lincRNA NOVEL OTTHUMG00000153173.4 10983 2101 20 ENSG00000201070.1 RNU4-84P chr2 98782410 98782548 + snRNA KNOWN NA 139 139 1 ENSG00000196872.9 KIAA1211L chr2 98793846 98936259 - protein_coding KNOWN OTTHUMG00000153171.8 142414 4705 50 ENSG00000238830.1 RNU7-46P chr2 98840675 98840736 - snRNA KNOWN NA 62 62 1 ENSG00000135951.13 TSGA10 chr2 98997261 99154964 - protein_coding KNOWN OTTHUMG00000130637.3 157704 7375 161 ENSG00000231822.1 AC019097.7 chr2 99102018 99102752 + processed_pseudogene KNOWN OTTHUMG00000153174.1 735 735 1 ENSG00000237200.1 ZBTB40-IT1 chr1 22517474 22519708 + sense_intronic NOVEL OTTHUMG00000040025.1 2235 273 2 ENSG00000241962.8 C2orf15 chr2 99141485 99322741 + protein_coding NOVEL OTTHUMG00000186049.1 181257 1993 18 ENSG00000273045.4 C2orf15 chr2 99141485 99151487 + protein_coding KNOWN OTTHUMG00000130635.4 10003 2098 11 ENSG00000144182.15 LIPT1 chr2 99154955 99163157 + protein_coding KNOWN OTTHUMG00000130640.2 8203 2279 18 ENSG00000273155.1 RP11-38C17.1 chr2 99154998 99195298 + protein_coding PUTATIVE OTTHUMG00000186443.1 40301 669 6 ENSG00000158411.9 MITD1 chr2 99161427 99181058 - protein_coding KNOWN OTTHUMG00000130638.4 19632 4305 42 ENSG00000185414.18 MRPL30 chr2 99181079 99197626 + protein_coding KNOWN OTTHUMG00000130642.2 16548 2898 27 ENSG00000185674.8 LYG2 chr2 99242246 99255282 - protein_coding KNOWN OTTHUMG00000130643.2 13037 1206 34 ENSG00000144214.8 LYG1 chr2 99284238 99304742 - protein_coding KNOWN OTTHUMG00000130639.2 20505 1093 15 ENSG00000115514.10 TXNDC9 chr2 99318982 99340702 - protein_coding KNOWN OTTHUMG00000130641.5 21721 2816 35 ENSG00000158417.9 EIF5B chr2 99337353 99401326 + protein_coding KNOWN OTTHUMG00000153242.2 63974 7883 57 ENSG00000277294.1 AL645608.1 chr1 965110 965166 + miRNA NOVEL NA 57 57 1 ENSG00000070886.9 EPHA8 chr1 22563564 22603594 + protein_coding KNOWN OTTHUMG00000002892.1 40031 5358 28 ENSG00000135945.8 REV1 chr2 99400475 99490035 - protein_coding KNOWN OTTHUMG00000130636.2 89561 7769 126 ENSG00000273306.1 RP11-527J8.1 chr2 99405218 99405843 + antisense NOVEL OTTHUMG00000186029.1 626 626 1 ENSG00000222274.1 AC018690.1 chr2 99520103 99520232 + miRNA NOVEL NA 130 130 1 ENSG00000144218.17 AFF3 chr2 99545419 100142739 - protein_coding KNOWN OTTHUMG00000153011.7 597321 12737 130 ENSG00000281739.1 AC093373.1 chr2 99601512 99601640 - miRNA NOVEL NA 129 129 1 ENSG00000230393.1 AC092667.2 chr2 100104919 100107504 + antisense NOVEL OTTHUMG00000153210.1 2586 2586 1 ENSG00000232084.4 LINC01104 chr2 100208254 100251484 + lincRNA NOVEL OTTHUMG00000153132.1 43231 3370 6 ENSG00000170500.11 LONRF2 chr2 100273291 100322733 - protein_coding KNOWN OTTHUMG00000130668.3 49443 13933 24 ENSG00000269383.2 RP11-292K15.2 chr2 100370255 100370545 - processed_pseudogene KNOWN OTTHUMG00000187107.1 291 291 1 ENSG00000270699.1 RP11-292K15.1 chr2 100377421 100377532 + processed_pseudogene KNOWN OTTHUMG00000184277.1 112 112 1 ENSG00000276835.1 AL158086.1 chr1 22633308 22633416 - miRNA NOVEL NA 109 109 1 ENSG00000115526.9 CHST10 chr2 100391860 100417656 - protein_coding KNOWN OTTHUMG00000130669.9 25797 4487 59 ENSG00000238029.1 AC012493.1 chr2 100425348 100426107 + processed_pseudogene KNOWN OTTHUMG00000153140.1 760 760 1 ENSG00000204640.1 NMS chr2 100470482 100483280 + protein_coding KNOWN OTTHUMG00000153142.1 12799 485 10 ENSG00000204637.4 AC068538.2 chr2 100509277 100509612 + processed_pseudogene KNOWN OTTHUMG00000153139.2 336 336 1 ENSG00000115539.12 PDCL3 chr2 100562690 100576735 + protein_coding KNOWN OTTHUMG00000153141.3 14046 1831 14 ENSG00000227259.2 HMGN2P22 chr2 100591150 100591324 - processed_pseudogene KNOWN OTTHUMG00000153161.2 175 175 1 ENSG00000234988.1 AC068538.4 chr2 100607028 100609358 + lincRNA NOVEL OTTHUMG00000153149.1 2331 654 4 ENSG00000226034.2 NANOGNBP1 chr2 100660199 100660678 + processed_pseudogene KNOWN OTTHUMG00000153162.2 480 480 1 ENSG00000234169.1 AC092168.3 chr2 100669892 100676038 - lincRNA NOVEL OTTHUMG00000153160.1 6147 562 2 ENSG00000228488.1 AC092168.4 chr2 100722221 100722882 - lincRNA NOVEL OTTHUMG00000153159.1 662 236 2 ENSG00000173372.15 C1QA chr1 22636506 22639608 + protein_coding KNOWN OTTHUMG00000002893.3 3103 1272 8 ENSG00000170485.15 NPAS2 chr2 100820152 100996829 + protein_coding KNOWN OTTHUMG00000130675.6 176678 12491 81 ENSG00000232034.1 AC092168.2 chr2 100822661 100847220 + sense_intronic NOVEL OTTHUMG00000153029.1 24560 717 3 ENSG00000230140.4 AC016738.3 chr2 100972648 100977161 - antisense NOVEL OTTHUMG00000153028.1 4514 939 8 ENSG00000223947.1 AC016738.4 chr2 100993676 101002244 - antisense NOVEL OTTHUMG00000153031.1 8569 3485 2 ENSG00000071082.9 RPL31 chr2 101001715 101024032 + protein_coding KNOWN OTTHUMG00000130687.7 22318 5791 44 ENSG00000204634.11 TBC1D8 chr2 101007617 101252866 - protein_coding KNOWN OTTHUMG00000153040.2 245250 6030 66 ENSG00000281681.1 Metazoa_SRP chr2 101023045 101023308 - misc_RNA NOVEL NA 264 264 1 ENSG00000271532.1 RP11-426K3.1 chr2 101068378 101068656 + processed_pseudogene KNOWN OTTHUMG00000184265.1 279 279 1 ENSG00000272902.2 RP11-299H21.1 chr2 101151660 101155412 + lincRNA NOVEL OTTHUMG00000186030.2 3753 2478 2 ENSG00000280738.1 AC013722.1 chr2 101231916 101232049 + miRNA NOVEL NA 134 134 1 ENSG00000159189.10 C1QC chr1 22643630 22648110 + protein_coding KNOWN OTTHUMG00000002891.2 4481 1335 9 ENSG00000158435.6 CNOT11 chr2 101252802 101270316 + protein_coding KNOWN OTTHUMG00000130686.2 17515 2786 13 ENSG00000163162.7 RNF149 chr2 101271219 101308701 - protein_coding KNOWN OTTHUMG00000130685.2 37483 4836 23 ENSG00000212283.1 SNORD89 chr2 101272936 101273049 - snoRNA KNOWN NA 114 114 1 ENSG00000264857.1 MIR5696 chr2 101309450 101309534 + miRNA KNOWN NA 85 85 1 ENSG00000175874.8 CREG2 chr2 101345551 101387595 - protein_coding KNOWN OTTHUMG00000130692.3 42045 7150 10 ENSG00000226058.1 AC092570.1 chr2 101375587 101376055 + processed_pseudogene KNOWN OTTHUMG00000155385.2 469 469 1 ENSG00000196460.11 RFX8 chr2 101397361 101474703 - protein_coding KNOWN OTTHUMG00000130693.5 77343 2551 35 ENSG00000223826.1 AC092570.2 chr2 101479390 101486822 + lincRNA NOVEL OTTHUMG00000155390.1 7433 390 3 ENSG00000237549.1 AC092570.3 chr2 101509530 101510222 - processed_pseudogene KNOWN OTTHUMG00000155389.1 693 693 1 ENSG00000232556.1 AC092570.4 chr2 101520834 101521976 - processed_pseudogene KNOWN OTTHUMG00000155388.1 1143 1143 1 ENSG00000173369.14 C1QB chr1 22652762 22661538 + protein_coding KNOWN OTTHUMG00000002896.3 8777 1601 13 ENSG00000071054.14 MAP4K4 chr2 101696850 101894689 + protein_coding KNOWN OTTHUMG00000155394.3 197840 11961 373 ENSG00000281162.1 LINC01127 chr2 101962056 101987167 + lincRNA KNOWN OTTHUMG00000189566.1 25112 3841 14 ENSG00000115590.12 IL1R2 chr2 101991844 102028544 + protein_coding KNOWN OTTHUMG00000130695.2 36701 3073 45 ENSG00000115594.10 IL1R1 chr2 102064544 102179874 + protein_coding KNOWN OTTHUMG00000130783.4 115331 7083 110 ENSG00000226925.1 AC007271.3 chr2 102172621 102182108 - antisense NOVEL OTTHUMG00000153435.1 9488 382 3 ENSG00000115598.8 IL1RL2 chr2 102186973 102240002 + protein_coding KNOWN OTTHUMG00000130776.2 53030 2644 37 ENSG00000205716.4 FAM183DP chr2 102249857 102250255 - processed_pseudogene KNOWN OTTHUMG00000153041.1 399 399 1 ENSG00000115602.15 IL1RL1 chr2 102311502 102352037 + protein_coding KNOWN OTTHUMG00000130782.2 40536 5746 59 ENSG00000115604.9 IL18R1 chr2 102311529 102398775 + protein_coding KNOWN OTTHUMG00000130780.4 87247 4353 40 ENSG00000236785.1 AC007248.7 chr2 102411243 102412108 + processed_pseudogene KNOWN OTTHUMG00000153095.1 866 866 1 ENSG00000133216.15 EPHB2 chr1 22710839 22921500 + protein_coding KNOWN OTTHUMG00000002881.4 210662 12516 80 ENSG00000115607.8 IL18RAP chr2 102418689 102452565 + protein_coding KNOWN OTTHUMG00000130777.2 33877 2966 27 ENSG00000264764.1 MIR4772 chr2 102432289 102432366 + miRNA KNOWN NA 78 78 1 ENSG00000236525.1 AC007278.2 chr2 102433957 102435340 + sense_intronic NOVEL OTTHUMG00000153098.1 1384 1200 2 ENSG00000234389.1 AC007278.3 chr2 102438713 102440475 + sense_intronic NOVEL OTTHUMG00000153092.1 1763 1327 3 ENSG00000180251.4 SLC9A4 chr2 102473303 102533972 + protein_coding KNOWN OTTHUMG00000153093.1 60670 4478 14 ENSG00000115616.2 SLC9A2 chr2 102619707 102711318 + protein_coding KNOWN OTTHUMG00000130778.2 91612 5984 20 ENSG00000135953.9 MFSD9 chr2 102715840 102736888 - protein_coding KNOWN OTTHUMG00000130781.3 21049 4367 40 ENSG00000170417.13 TMEM182 chr2 102736908 102843893 + protein_coding KNOWN OTTHUMG00000130779.3 106986 4879 36 ENSG00000277527.1 AC007251.2 chr2 102873339 102895722 - lincRNA NOVEL OTTHUMG00000153096.2 22384 709 4 ENSG00000224095.1 AC108051.1 chr2 102967408 102984429 - lincRNA NOVEL OTTHUMG00000153097.1 17022 437 4 ENSG00000265422.1 MIR4684 chr1 22719517 22719598 + miRNA KNOWN NA 82 82 1 ENSG00000227680.1 AC108051.2 chr2 102987323 102988565 + lincRNA NOVEL OTTHUMG00000153094.1 1243 549 3 ENSG00000224850.1 AC108051.3 chr2 103011779 103019898 + lincRNA NOVEL OTTHUMG00000153099.2 8120 478 2 ENSG00000229209.1 AC073987.1 chr2 103109759 103176260 - lincRNA NOVEL OTTHUMG00000153111.1 66502 638 4 ENSG00000227623.1 AC073987.2 chr2 103275904 103276138 + processed_pseudogene KNOWN OTTHUMG00000153112.1 235 235 1 ENSG00000236596.1 AC092568.1 chr2 103494241 103495842 + processed_pseudogene KNOWN OTTHUMG00000153113.2 1602 1284 2 ENSG00000221849.2 AC018880.1 chr2 103527620 103529261 + processed_pseudogene KNOWN OTTHUMG00000153110.1 1642 1319 2 ENSG00000231723.1 AC018880.2 chr2 103623630 103623830 + processed_pseudogene KNOWN OTTHUMG00000153114.1 201 201 1 ENSG00000232597.4 AC013727.1 chr2 103856659 103880209 - lincRNA NOVEL OTTHUMG00000153045.2 23551 1221 8 ENSG00000236141.1 AC013727.2 chr2 103865746 103869688 - lincRNA NOVEL OTTHUMG00000153043.1 3943 545 4 ENSG00000256637.5 RP11-76I14.1 chr2 103874310 104077778 + lincRNA NOVEL OTTHUMG00000167762.3 203469 2479 15 ENSG00000216157.2 AL611946.1 chr1 22748817 22748911 - miRNA NOVEL NA 95 95 1 ENSG00000273515.1 DAOA-AS1_2 chr2 103953098 103953284 - misc_RNA NOVEL NA 187 187 1 ENSG00000228968.1 AC096554.1 chr2 104125268 104147229 - lincRNA NOVEL OTTHUMG00000153044.1 21962 529 5 ENSG00000233955.1 AHCYP3 chr2 104395002 104396280 - processed_pseudogene KNOWN OTTHUMG00000153048.1 1279 1279 1 ENSG00000227157.1 AC068535.2 chr2 104411201 104415612 + lincRNA NOVEL OTTHUMG00000153047.1 4412 471 2 ENSG00000225765.1 AC068535.3 chr2 104412227 104414008 - lincRNA NOVEL OTTHUMG00000153049.1 1782 493 2 ENSG00000235597.1 LINC01102 chr2 104433267 104520832 + lincRNA NOVEL OTTHUMG00000153050.1 87566 5098 13 ENSG00000280979.1 AC068535.1 chr2 104488257 104488351 - miRNA NOVEL NA 95 95 1 ENSG00000234781.2 LINC01103 chr2 104488458 104510509 - lincRNA NOVEL OTTHUMG00000153051.2 22052 1457 6 ENSG00000199727.2 U3 chr2 104532773 104532985 + snoRNA NOVEL NA 213 213 1 ENSG00000221654.1 AC013402.1 chr2 104568817 104568920 - miRNA NOVEL NA 104 104 1 ENSG00000225952.1 RP11-69E9.1 chr1 22835713 22836849 - antisense NOVEL OTTHUMG00000002880.1 1137 480 2 ENSG00000231626.1 AC013402.4 chr2 104580821 104581890 - lincRNA NOVEL OTTHUMG00000153056.1 1070 437 2 ENSG00000236109.1 AC013402.3 chr2 104583152 104585354 + lincRNA NOVEL OTTHUMG00000153055.1 2203 451 2 ENSG00000230690.1 AC013402.5 chr2 104659337 104664837 + lincRNA NOVEL OTTHUMG00000153057.1 5501 561 4 ENSG00000225669.1 AC068535.5 chr2 104678223 104678673 + processed_pseudogene KNOWN OTTHUMG00000153053.2 451 451 1 ENSG00000228528.1 AC068057.1 chr2 104703758 104705509 + lincRNA NOVEL OTTHUMG00000153054.1 1752 709 2 ENSG00000279904.1 CTD-2015C24.1 chr2 104706612 104707506 + TEC KNOWN OTTHUMG00000176113.1 895 895 1 ENSG00000207249.1 SNORA72 chr2 104733234 104733362 + snoRNA NOVEL NA 129 129 1 ENSG00000234177.4 LINC01114 chr2 104746638 104757719 - lincRNA NOVEL OTTHUMG00000153066.1 11082 3751 10 ENSG00000213301.2 HMGB3P11 chr2 104771282 104771885 + processed_pseudogene KNOWN OTTHUMG00000153069.1 604 604 1 ENSG00000233639.4 LINC01158 chr2 104807572 104853183 - processed_transcript NOVEL OTTHUMG00000153065.1 45612 844 20 ENSG00000264014.1 MIR4253 chr1 22863159 22863226 - miRNA KNOWN NA 68 68 1 ENSG00000269707.1 RP11-13J10.1 chr2 104853285 104926052 + sense_overlapping NOVEL OTTHUMG00000182993.1 72768 443 3 ENSG00000198914.2 POU3F3 chr2 104855511 104860471 + protein_coding KNOWN OTTHUMG00000153067.2 4961 4961 1 ENSG00000239587.1 AC018730.4 chr2 104865407 104867496 - antisense NOVEL OTTHUMG00000153068.1 2090 327 4 ENSG00000229743.2 LINC01159 chr2 104865497 104872595 - processed_transcript NOVEL OTTHUMG00000153064.1 7099 3351 4 ENSG00000224509.1 AC010884.1 chr2 104936411 105038496 - antisense NOVEL OTTHUMG00000153077.1 102086 472 3 ENSG00000263685.1 AC010884.2 chr2 104992902 104992980 - miRNA NOVEL NA 79 79 1 ENSG00000135972.7 MRPS9 chr2 105037983 105099960 + protein_coding KNOWN OTTHUMG00000130807.2 61978 1915 21 ENSG00000231851.4 AC104655.2 chr2 105097052 105102944 - antisense NOVEL OTTHUMG00000153078.1 5893 609 7 ENSG00000226508.1 AC104655.3 chr2 105144113 105145424 + lincRNA NOVEL OTTHUMG00000153079.1 1312 1009 7 ENSG00000135973.2 GPR45 chr2 105241743 105243049 + protein_coding KNOWN OTTHUMG00000130805.1 1307 1307 1 ENSG00000187583.9 PLEKHN1 chr1 966497 975865 + protein_coding KNOWN OTTHUMG00000040756.4 9369 2833 54 ENSG00000215906.7 LACTBL1 chr1 22953043 22965338 - protein_coding KNOWN OTTHUMG00000003228.4 12296 1641 12 ENSG00000272861.1 RP11-332H14.1 chr2 105249404 105249794 - lincRNA NOVEL OTTHUMG00000186031.1 391 391 1 ENSG00000135966.11 TGFBRAP1 chr2 105264391 105330034 - protein_coding KNOWN OTTHUMG00000130809.2 65644 6005 35 ENSG00000281871.1 AC012360.1 chr2 105279938 105280038 + miRNA NOVEL NA 101 101 1 ENSG00000235319.1 AC012360.4 chr2 105324210 105330529 + lincRNA NOVEL OTTHUMG00000153107.1 6320 674 4 ENSG00000272994.1 RP11-332H14.2 chr2 105334027 105337475 - lincRNA NOVEL OTTHUMG00000186032.1 3449 3449 1 ENSG00000135974.8 C2orf49 chr2 105337359 105349211 + protein_coding KNOWN OTTHUMG00000130808.2 11853 4768 9 ENSG00000115641.17 FHL2 chr2 105357712 105438513 - protein_coding KNOWN OTTHUMG00000153120.3 80802 6626 69 ENSG00000238273.3 AC012360.6 chr2 105363038 105378839 + antisense NOVEL OTTHUMG00000153109.2 15802 2609 7 ENSG00000071051.12 NCK2 chr2 105744897 105894274 + protein_coding KNOWN OTTHUMG00000153116.2 149378 2990 23 ENSG00000235522.5 AC009505.2 chr2 105846534 105857177 - antisense NOVEL OTTHUMG00000153117.4 10644 2166 17 ENSG00000227868.5 C1orf234 chr1 23010834 23015850 - protein_coding KNOWN OTTHUMG00000003226.3 5017 658 7 ENSG00000234162.1 AC009505.4 chr2 105959084 105962006 - lincRNA NOVEL OTTHUMG00000153152.1 2923 491 4 ENSG00000119147.8 C2orf40 chr2 106063246 106078159 + protein_coding KNOWN OTTHUMG00000130921.2 14914 1741 22 ENSG00000115652.13 UXS1 chr2 106093303 106194339 - protein_coding KNOWN OTTHUMG00000153150.2 101037 7023 98 ENSG00000233339.1 AC018878.3 chr2 106179542 106183797 + antisense NOVEL OTTHUMG00000153153.1 4256 433 2 ENSG00000273595.1 RP11-707E21.1 chr2 106207394 106208115 + processed_pseudogene KNOWN OTTHUMG00000187676.1 722 722 1 ENSG00000213295.3 AC092106.2 chr2 106247369 106247741 + processed_pseudogene KNOWN OTTHUMG00000153154.1 373 373 1 ENSG00000224061.1 AC092106.1 chr2 106253231 106253717 - processed_pseudogene KNOWN OTTHUMG00000153151.1 487 487 1 ENSG00000230353.5 AC114755.2 chr2 106288803 106289053 - processed_pseudogene KNOWN OTTHUMG00000153129.1 251 251 1 ENSG00000233939.1 AC114755.4 chr2 106304755 106305197 + processed_pseudogene KNOWN OTTHUMG00000153186.1 443 443 1 ENSG00000227513.1 AC114755.3 chr2 106344566 106345433 + processed_pseudogene KNOWN OTTHUMG00000153131.1 868 868 1 ENSG00000004487.14 KDM1A chr1 23019448 23083689 + protein_coding KNOWN OTTHUMG00000003220.5 64242 5435 55 ENSG00000229682.1 AC114755.5 chr2 106368209 106368876 - processed_pseudogene KNOWN OTTHUMG00000153184.1 668 361 2 ENSG00000235486.1 AC114755.7 chr2 106369724 106378247 + unprocessed_pseudogene KNOWN OTTHUMG00000153179.1 8524 831 6 ENSG00000240935.5 PLGLA chr2 106382171 106393031 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000153188.2 10861 991 12 ENSG00000153165.17 RGPD3 chr2 106391290 106468376 - protein_coding KNOWN OTTHUMG00000153182.1 77087 5818 46 ENSG00000237666.2 AC108868.3 chr2 106470799 106477669 - unprocessed_pseudogene KNOWN OTTHUMG00000153187.1 6871 530 3 ENSG00000254126.5 CD8BP chr2 106487427 106506940 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000153183.2 19514 633 11 ENSG00000231505.1 AC108868.5 chr2 106521903 106538079 - lincRNA NOVEL OTTHUMG00000153181.1 16177 554 3 ENSG00000232001.1 AC108868.6 chr2 106543014 106544297 + lincRNA NOVEL OTTHUMG00000153180.1 1284 511 2 ENSG00000214199.3 EEF1A1P12 chr2 106697331 106698676 - processed_pseudogene KNOWN OTTHUMG00000153185.1 1346 1346 1 ENSG00000144057.14 ST6GAL2 chr2 106801600 106887108 - protein_coding KNOWN OTTHUMG00000130923.3 85509 7708 23 ENSG00000240553.1 RP1-184J9.2 chr1 23020147 23088058 - antisense NOVEL OTTHUMG00000003222.1 67912 666 2 ENSG00000238250.1 ST6GAL2-IT1 chr2 106822923 106825031 - sense_intronic NOVEL OTTHUMG00000153201.1 2109 388 2 ENSG00000227294.1 AC016994.2 chr2 106834464 106841207 + antisense NOVEL OTTHUMG00000153202.1 6744 552 2 ENSG00000229360.1 PPP1R2P5 chr2 106940880 106941482 - processed_pseudogene KNOWN OTTHUMG00000153206.1 603 603 1 ENSG00000226905.1 AC005040.3 chr2 106963193 106963674 + processed_pseudogene KNOWN OTTHUMG00000153207.1 482 482 1 ENSG00000229457.1 AC006227.1 chr2 107254691 107365873 - lincRNA NOVEL OTTHUMG00000153205.2 111183 1196 10 ENSG00000225588.2 AC096669.1 chr2 107362282 107407329 + lincRNA NOVEL OTTHUMG00000153144.3 45048 1305 9 ENSG00000237880.1 AC096669.2 chr2 107385632 107542649 - lincRNA NOVEL OTTHUMG00000153200.1 157018 609 5 ENSG00000224568.1 AC096669.3 chr2 107529487 107556326 + lincRNA NOVEL OTTHUMG00000153209.2 26840 1612 5 ENSG00000232991.4 GACAT1 chr2 107754112 107822129 + lincRNA KNOWN OTTHUMG00000153313.1 68018 811 9 ENSG00000230651.6 RGPD4-AS1 chr2 107823063 107826891 - lincRNA NOVEL OTTHUMG00000153314.3 3829 2500 14 ENSG00000263793.1 MIR3115 chr1 23044305 23044372 + miRNA KNOWN NA 68 68 1 ENSG00000196862.9 RGPD4 chr2 107826937 107890841 + protein_coding KNOWN OTTHUMG00000153208.2 63905 5464 23 ENSG00000233494.1 AC009963.3 chr2 107902997 107903134 - processed_pseudogene KNOWN OTTHUMG00000153328.1 138 138 1 ENSG00000227270.1 AC009963.4 chr2 107903964 107904241 + unprocessed_pseudogene KNOWN OTTHUMG00000153329.1 278 157 2 ENSG00000237745.1 AC009963.5 chr2 107914948 107915286 + processed_pseudogene KNOWN OTTHUMG00000153363.1 339 339 1 ENSG00000235325.1 AC009963.6 chr2 107920763 107921248 - processed_pseudogene KNOWN OTTHUMG00000153362.1 486 486 1 ENSG00000115665.7 SLC5A7 chr2 107986523 108013994 + protein_coding KNOWN OTTHUMG00000130959.2 27472 5168 18 ENSG00000231221.1 AC023672.2 chr2 108049200 108052755 - lincRNA NOVEL OTTHUMG00000153366.1 3556 388 3 ENSG00000229890.1 AC023672.1 chr2 108099110 108099492 + processed_pseudogene KNOWN OTTHUMG00000153365.1 383 383 1 ENSG00000225328.1 AC019100.3 chr2 108167748 108217841 - antisense NOVEL OTTHUMG00000153177.1 50094 611 5 ENSG00000236877.2 RP11-443K8.2 chr2 108226015 108226331 - processed_pseudogene KNOWN OTTHUMG00000184506.1 317 317 1 ENSG00000266802.1 MIR4419A chr1 23057858 23057934 - miRNA KNOWN NA 77 77 1 ENSG00000196228.3 SULT1C3 chr2 108247195 108265351 + protein_coding KNOWN OTTHUMG00000153227.1 18157 915 7 ENSG00000227597.1 AC019100.7 chr2 108276812 108277942 + processed_pseudogene KNOWN OTTHUMG00000153228.1 1131 1131 1 ENSG00000198203.8 SULT1C2 chr2 108288639 108309915 + protein_coding KNOWN OTTHUMG00000153215.2 21277 8399 55 ENSG00000261209.1 RP11-443K8.1 chr2 108317725 108318611 + unprocessed_pseudogene KNOWN OTTHUMG00000176329.1 887 294 2 ENSG00000237223.5 SULT1C2P1 chr2 108322238 108353799 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000153216.3 31562 2004 8 ENSG00000271070.1 RP11-465O11.2 chr2 108367116 108367938 + processed_pseudogene KNOWN OTTHUMG00000184264.1 823 823 1 ENSG00000198075.8 SULT1C4 chr2 108377911 108388057 + protein_coding KNOWN OTTHUMG00000130958.3 10147 2898 14 ENSG00000271284.1 RP11-465O11.1 chr2 108423612 108423885 + processed_pseudogene KNOWN OTTHUMG00000184263.1 274 274 1 ENSG00000135968.18 GCC2 chr2 108448561 108509415 + protein_coding KNOWN OTTHUMG00000153214.15 60855 13282 96 ENSG00000214184.3 AC012487.2 chr2 108507515 108534196 - antisense NOVEL OTTHUMG00000153224.1 26682 799 5 ENSG00000169641.12 LUZP1 chr1 23084023 23177808 - protein_coding KNOWN OTTHUMG00000003227.3 93786 9658 20 ENSG00000169756.15 LIMS1 chr2 108534355 108687246 + protein_coding KNOWN OTTHUMG00000130983.9 152892 7672 102 ENSG00000228763.1 AC010095.5 chr2 108676795 108678601 - antisense NOVEL OTTHUMG00000153229.1 1807 477 3 ENSG00000233648.1 AC010095.6 chr2 108694750 108694893 - processed_pseudogene KNOWN OTTHUMG00000153422.1 144 144 1 ENSG00000235644.1 AC010095.7 chr2 108712262 108712900 - processed_pseudogene KNOWN OTTHUMG00000153421.1 639 639 1 ENSG00000153201.14 RANBP2 chr2 108719481 108785811 + protein_coding KNOWN OTTHUMG00000130981.10 66331 12302 40 ENSG00000163006.10 CCDC138 chr2 108786757 108885477 + protein_coding KNOWN OTTHUMG00000130980.4 98721 5796 65 ENSG00000227470.1 AC073415.2 chr2 108878308 108878460 + processed_pseudogene KNOWN OTTHUMG00000153436.1 153 153 1 ENSG00000135960.8 EDAR chr2 108894471 108989372 - protein_coding KNOWN OTTHUMG00000130982.2 94902 4426 35 ENSG00000277628.1 Metazoa_SRP chr2 109124357 109124609 - misc_RNA NOVEL NA 253 253 1 ENSG00000259863.1 SH3RF3-AS1 chr2 109127327 109128930 - lincRNA NOVEL OTTHUMG00000153437.1 1604 1604 1 ENSG00000229010.1 RP5-979D14.1 chr1 23140325 23141142 + processed_pseudogene KNOWN OTTHUMG00000154765.1 818 818 1 ENSG00000172985.10 SH3RF3 chr2 109129348 109504632 + protein_coding KNOWN OTTHUMG00000153439.6 375285 5803 10 ENSG00000264934.1 MIR4265 chr2 109141490 109141588 - miRNA KNOWN NA 99 99 1 ENSG00000228551.1 SNRPGP9 chr2 109251422 109251646 + processed_pseudogene KNOWN OTTHUMG00000153438.1 225 225 1 ENSG00000265965.1 MIR4266 chr2 109313571 109313625 - miRNA KNOWN NA 55 55 1 ENSG00000279515.1 FLJ20019 chr2 109344229 109344918 - protein_coding KNOWN NA 690 690 1 ENSG00000186522.13 SEPT10 chr2 109542982 109614206 - protein_coding KNOWN OTTHUMG00000154957.4 71225 4131 93 ENSG00000237916.1 RP11-537E18.1 chr2 109552536 109552846 + processed_pseudogene KNOWN OTTHUMG00000157076.1 311 311 1 ENSG00000230696.1 AC011753.5 chr2 109594693 109605698 - sense_intronic NOVEL OTTHUMG00000154962.1 11006 610 2 ENSG00000198142.4 SOWAHC chr2 109614334 109618990 + protein_coding KNOWN OTTHUMG00000153219.1 4657 4657 1 ENSG00000230603.1 AC011753.6 chr2 109665209 109665742 + processed_pseudogene KNOWN OTTHUMG00000154980.1 534 220 2 ENSG00000206935.1 RNU6-514P chr1 23162704 23162810 + snRNA KNOWN NA 107 107 1 ENSG00000231099.1 BMS1P19 chr2 109667128 109668002 + processed_pseudogene KNOWN OTTHUMG00000154976.1 875 393 2 ENSG00000233307.1 AC109815.2 chr2 109732731 109733136 + processed_pseudogene KNOWN OTTHUMG00000154961.1 406 406 1 ENSG00000233707.3 RPL22P11 chr2 109737139 109737523 - processed_pseudogene KNOWN OTTHUMG00000154956.1 385 385 1 ENSG00000015568.11 RGPD5 chr2 109792758 109857695 + protein_coding KNOWN OTTHUMG00000130985.16 64938 14175 103 ENSG00000256977.9 LIMS3 chr2 109898428 109914635 + protein_coding KNOWN OTTHUMG00000131197.6 16208 1684 11 ENSG00000186148.10 AC013271.3 chr2 109933161 109985124 + processed_transcript NOVEL OTTHUMG00000153222.3 51964 4469 34 ENSG00000240069.1 GPAA1P1 chr2 109984058 109984988 + transcribed_processed_pseudogene KNOWN OTTHUMG00000153221.2 931 931 1 ENSG00000225108.1 ZBTB45P1 chr2 109986939 109988394 - processed_pseudogene KNOWN OTTHUMG00000154978.1 1456 1456 1 ENSG00000204588.5 LINC01123 chr2 109987063 109996140 + lincRNA NOVEL OTTHUMG00000154954.2 9078 3295 6 ENSG00000235721.1 AC013268.3 chr2 110007675 110010783 + processed_pseudogene KNOWN OTTHUMG00000154977.1 3109 2324 2 ENSG00000252578.1 RNU6-135P chr1 23163953 23164053 + snRNA KNOWN NA 101 101 1 ENSG00000229730.2 AC013268.4 chr2 110012265 110012601 - processed_pseudogene KNOWN OTTHUMG00000154979.2 337 337 1 ENSG00000265682.1 MIR4267 chr2 110069961 110070042 - miRNA KNOWN NA 82 82 1 ENSG00000144063.3 MALL chr2 110083870 110116566 - protein_coding KNOWN OTTHUMG00000131196.2 32697 3167 11 ENSG00000264979.1 MIR4436B2 chr2 110086433 110086523 - miRNA KNOWN NA 91 91 1 ENSG00000144061.11 NPHP1 chr2 110122311 110205066 - protein_coding KNOWN OTTHUMG00000131195.3 82756 11763 149 ENSG00000212091.1 AC013268.1 chr2 110126732 110126824 - miRNA NOVEL NA 93 93 1 ENSG00000233370.1 AC092664.1 chr2 110184054 110185179 + processed_pseudogene KNOWN OTTHUMG00000154959.1 1126 1126 1 ENSG00000175701.9 LINC00116 chr2 110211529 110245420 - protein_coding KNOWN OTTHUMG00000131194.5 33892 2051 14 ENSG00000261760.5 RP11-1223D19.1 chr2 110231106 110285856 + lincRNA NOVEL OTTHUMG00000176121.2 54751 2022 29 ENSG00000263881.1 MIR4436B1 chr2 110284853 110284943 + miRNA KNOWN NA 91 91 1 ENSG00000187642.8 PERM1 chr1 975204 982093 - protein_coding KNOWN OTTHUMG00000040757.3 6890 3424 10 ENSG00000179546.4 HTR1D chr1 23191895 23194729 - protein_coding KNOWN OTTHUMG00000003235.1 2835 2835 1 ENSG00000264336.1 AC140479.1 chr2 110301312 110301393 + miRNA NOVEL NA 82 82 1 ENSG00000226991.2 AC112229.6 chr2 110358790 110359126 + processed_pseudogene KNOWN OTTHUMG00000155032.2 337 337 1 ENSG00000230650.1 AC112229.1 chr2 110360608 110363737 - processed_pseudogene KNOWN OTTHUMG00000153193.1 3130 3130 1 ENSG00000175772.10 LINC01106 chr2 110375138 110384442 - lincRNA NOVEL OTTHUMG00000155034.3 9305 2774 5 ENSG00000226065.1 ZBTB45P2 chr2 110383112 110384642 + processed_pseudogene KNOWN OTTHUMG00000154955.1 1531 1531 1 ENSG00000230596.2 GPAA1P2 chr2 110386377 110388163 - transcribed_processed_pseudogene KNOWN OTTHUMG00000153194.2 1787 1787 2 ENSG00000273471.1 RP13-1039J1.4 chr2 110386411 110433673 - processed_transcript NOVEL OTTHUMG00000186050.1 47263 1528 4 ENSG00000184115.15 RP13-1039J1.2 chr2 110402914 110435166 - lincRNA NOVEL OTTHUMG00000167880.1 32253 3320 25 ENSG00000257207.5 AC108938.5 chr2 110402934 110473075 - protein_coding KNOWN OTTHUMG00000167881.3 70142 3202 18 ENSG00000227574.2 RP13-1039J1.3 chr2 110449242 110451064 + antisense NOVEL OTTHUMG00000155076.2 1823 476 3 ENSG00000215381.3 RP5-1057J7.1 chr1 23244765 23245224 + processed_pseudogene KNOWN OTTHUMG00000003221.1 460 460 1 ENSG00000256671.5 LIMS3L chr2 110465051 110472934 - protein_coding KNOWN OTTHUMG00000169984.2 7884 1256 5 ENSG00000231583.1 AC108938.3 chr2 110500100 110500235 + unprocessed_pseudogene KNOWN OTTHUMG00000155033.1 136 136 1 ENSG00000183054.10 RGPD6 chr2 110513812 110577185 - protein_coding KNOWN OTTHUMG00000153196.10 63374 13309 81 ENSG00000231536.1 AC123886.2 chr2 110610916 110612404 + antisense NOVEL OTTHUMG00000153641.1 1489 747 2 ENSG00000216867.2 AC114776.1 chr2 110633947 110634333 + processed_pseudogene KNOWN OTTHUMG00000153640.2 387 387 1 ENSG00000169679.13 BUB1 chr2 110637698 110678114 - protein_coding KNOWN OTTHUMG00000153638.4 40417 6032 131 ENSG00000235881.2 AC114776.3 chr2 110709575 110716595 - lincRNA NOVEL OTTHUMG00000153642.2 7021 4395 2 ENSG00000153093.17 ACOXL chr2 110732573 111118222 + protein_coding KNOWN OTTHUMG00000131257.4 385650 5747 87 ENSG00000236330.1 RPL5P9 chr2 110967834 110968719 + processed_pseudogene KNOWN OTTHUMG00000153639.1 886 886 1 ENSG00000204581.2 AC096670.3 chr2 111098345 111115588 - antisense NOVEL OTTHUMG00000153643.1 17244 3432 6 ENSG00000261326.2 LINC01355 chr1 23281309 23286752 - lincRNA NOVEL OTTHUMG00000175761.2 5444 5444 3 ENSG00000153094.20 BCL2L11 chr2 111119378 111168447 + protein_coding KNOWN OTTHUMG00000131256.8 49070 6658 100 ENSG00000230499.1 AC108463.1 chr2 111195963 111206494 + lincRNA NOVEL OTTHUMG00000153644.1 10532 412 2 ENSG00000172965.13 MIR4435-1HG chr2 111196350 111495100 - lincRNA NOVEL OTTHUMG00000150313.9 298751 8500 65 ENSG00000227992.1 AC108463.2 chr2 111203964 111206215 - processed_pseudogene KNOWN OTTHUMG00000153689.1 2252 347 2 ENSG00000271590.1 RP11-181E10.3 chr2 111210995 111212476 - lincRNA NOVEL OTTHUMG00000185273.1 1482 1482 1 ENSG00000229118.1 AC068491.2 chr2 111265283 111279880 + lincRNA NOVEL OTTHUMG00000153690.1 14598 617 2 ENSG00000270190.1 RP11-803D5.4 chr2 111266868 111267473 - lincRNA NOVEL OTTHUMG00000185276.1 606 606 1 ENSG00000226928.1 RPS14P4 chr2 111295629 111296046 - processed_pseudogene KNOWN OTTHUMG00000153699.1 418 418 1 ENSG00000266139.1 MIR4435-2 chr2 111321012 111321091 - miRNA KNOWN NA 80 80 1 ENSG00000279191.1 RP11-803D5.1 chr2 111321433 111324812 - TEC KNOWN OTTHUMG00000185277.1 3380 3380 1 ENSG00000125944.17 HNRNPR chr1 23303771 23344336 - protein_coding KNOWN OTTHUMG00000003224.4 40566 8676 85 ENSG00000223973.2 AC068491.3 chr2 111383752 111384992 + transcribed_processed_pseudogene KNOWN OTTHUMG00000153697.2 1241 1241 2 ENSG00000280878.1 RP11-68E19.2 chr2 111468810 111637967 + lincRNA NOVEL OTTHUMG00000189704.1 169158 871 2 ENSG00000240350.2 AC017002.1 chr2 111491273 111570974 + lincRNA NOVEL OTTHUMG00000153695.2 79702 889 5 ENSG00000224959.1 AC017002.2 chr2 111491943 111494811 - lincRNA NOVEL OTTHUMG00000153694.1 2869 881 2 ENSG00000271635.1 RP11-68E19.1 chr2 111558413 111559937 - processed_pseudogene KNOWN OTTHUMG00000184507.1 1525 1525 1 ENSG00000225744.1 AC017002.4 chr2 111607841 111612518 + lincRNA NOVEL OTTHUMG00000153696.1 4678 792 2 ENSG00000237583.1 AC093166.1 chr2 111675026 111675343 + processed_pseudogene KNOWN OTTHUMG00000153243.1 318 318 1 ENSG00000227842.1 AC093166.2 chr2 111717508 111717837 + processed_pseudogene KNOWN OTTHUMG00000153259.1 330 330 1 ENSG00000228615.1 AC093166.3 chr2 111742586 111744662 + processed_pseudogene KNOWN OTTHUMG00000153260.1 2077 1017 3 ENSG00000153107.10 ANAPC1 chr2 111766271 111884690 - protein_coding KNOWN OTTHUMG00000131277.3 118420 13327 118 ENSG00000125945.13 ZNF436 chr1 23359448 23369442 - protein_coding KNOWN OTTHUMG00000003232.2 9995 4392 7 ENSG00000266063.1 MIR4771-1 chr2 111771061 111771134 - miRNA KNOWN NA 74 74 1 ENSG00000230958.1 AC093166.4 chr2 111865798 111866405 + processed_pseudogene KNOWN OTTHUMG00000153262.1 608 303 2 ENSG00000236307.2 EEF1E1P1 chr2 111887914 111888741 + processed_pseudogene KNOWN OTTHUMG00000153261.2 828 430 2 ENSG00000153208.15 MERTK chr2 111898479 112029561 + protein_coding KNOWN OTTHUMG00000131278.3 131083 4700 124 ENSG00000240183.3 RN7SL297P chr2 111930175 111930467 + misc_RNA KNOWN NA 293 293 1 ENSG00000225496.1 AC104651.2 chr2 111940302 111941036 - processed_pseudogene KNOWN OTTHUMG00000153268.1 735 735 1 ENSG00000232277.1 AC104651.3 chr2 111952144 111952671 - processed_pseudogene KNOWN OTTHUMG00000153269.1 528 528 1 ENSG00000153214.8 TMEM87B chr2 112055223 112119318 + protein_coding KNOWN OTTHUMG00000153266.1 64096 5256 45 ENSG00000144152.11 FBLN7 chr2 112138385 112188216 + protein_coding KNOWN OTTHUMG00000153267.3 49832 6578 42 ENSG00000278962.1 RP11-399B17.1 chr2 112188364 112190635 + TEC KNOWN OTTHUMG00000176143.1 2272 2272 1 ENSG00000249087.5 ZNF436-AS1 chr1 23368997 23371839 + antisense KNOWN OTTHUMG00000003225.2 2843 2655 13 ENSG00000144161.11 ZC3H8 chr2 112211525 112255136 - protein_coding KNOWN OTTHUMG00000153270.3 43612 6600 49 ENSG00000188177.12 ZC3H6 chr2 112275594 112340063 + protein_coding KNOWN OTTHUMG00000153286.3 64470 11803 30 ENSG00000235258.1 AC115115.3 chr2 112286057 112286422 - processed_pseudogene KNOWN OTTHUMG00000153287.1 366 366 1 ENSG00000236555.1 AC115115.4 chr2 112346011 112346258 + processed_pseudogene KNOWN OTTHUMG00000153285.1 248 248 1 ENSG00000169629.10 RGPD8 chr2 112370092 112434488 - protein_coding KNOWN OTTHUMG00000153289.2 64397 6886 88 ENSG00000114999.7 TTL chr2 112482154 112541739 + protein_coding KNOWN OTTHUMG00000131316.3 59586 15732 14 ENSG00000125630.14 POLR1B chr2 112541915 112577150 + protein_coding KNOWN OTTHUMG00000131314.3 35236 6329 132 ENSG00000207383.1 Y_RNA chr2 112579484 112579584 - misc_RNA NOVEL NA 101 101 1 ENSG00000125611.14 CHCHD5 chr2 112584240 112589275 + protein_coding KNOWN OTTHUMG00000131312.2 5036 3759 17 ENSG00000243389.1 AC012442.5 chr2 112589040 112614431 + 3prime_overlapping_ncrna NOVEL OTTHUMG00000153302.1 25392 425 2 ENSG00000201405.1 Y_RNA chr1 23370254 23370346 + misc_RNA NOVEL NA 93 93 1 ENSG00000228251.1 AC012442.6 chr2 112590796 112591939 + lincRNA NOVEL OTTHUMG00000153300.1 1144 529 2 ENSG00000231747.1 AC079922.2 chr2 112621809 112622167 - processed_pseudogene KNOWN OTTHUMG00000153301.1 359 359 1 ENSG00000237753.1 AC079922.3 chr2 112641832 112645690 - lincRNA NOVEL OTTHUMG00000153299.1 3859 2022 5 ENSG00000144136.9 SLC20A1 chr2 112645857 112663827 + protein_coding KNOWN OTTHUMG00000131317.3 17971 5577 45 ENSG00000144130.10 NT5DC4 chr2 112721486 112742879 + protein_coding KNOWN OTTHUMG00000153308.1 21394 4225 37 ENSG00000169607.11 CKAP2L chr2 112736607 112764677 - protein_coding KNOWN OTTHUMG00000131313.2 28071 5219 34 ENSG00000115008.5 IL1A chr2 112773915 112784590 - protein_coding KNOWN OTTHUMG00000131315.2 10676 2124 7 ENSG00000125538.10 IL1B chr2 112829751 112836903 - protein_coding KNOWN OTTHUMG00000131344.2 7153 3096 37 ENSG00000280228.1 RP11-67L14.1 chr2 112840328 112844195 + TEC KNOWN OTTHUMG00000176146.1 3868 3868 1 ENSG00000221541.1 AC079753.1 chr2 112844311 112844411 + miRNA NOVEL NA 101 101 1 ENSG00000271420.1 RP5-1057J7.7 chr1 23378380 23379029 - lincRNA NOVEL OTTHUMG00000185287.1 650 650 1 ENSG00000180152.3 AC079753.4 chr2 112853328 112854122 + processed_pseudogene KNOWN OTTHUMG00000153319.1 795 795 1 ENSG00000125571.8 IL37 chr2 112912971 112918882 + protein_coding KNOWN OTTHUMG00000131345.1 5912 839 20 ENSG00000227368.1 AC079753.5 chr2 112932625 112933171 + processed_pseudogene KNOWN OTTHUMG00000153324.1 547 547 1 ENSG00000136688.9 IL36G chr2 112973203 112985665 + protein_coding KNOWN OTTHUMG00000131336.3 12463 1380 13 ENSG00000236124.1 HMGN2P23 chr2 112981166 112981434 - processed_pseudogene KNOWN OTTHUMG00000153321.1 269 269 1 ENSG00000232090.2 AC016724.6 chr2 112995517 112995937 + processed_pseudogene KNOWN OTTHUMG00000153323.2 421 421 1 ENSG00000136694.8 IL36A chr2 113005461 113008044 + protein_coding KNOWN OTTHUMG00000153320.1 2584 888 4 ENSG00000136696.9 IL36B chr2 113022091 113052867 - protein_coding KNOWN OTTHUMG00000131338.1 30777 1869 11 ENSG00000136695.13 IL36RN chr2 113058638 113065382 + protein_coding KNOWN OTTHUMG00000131337.3 6745 3299 16 ENSG00000136697.11 IL1F10 chr2 113067970 113075850 + protein_coding KNOWN OTTHUMG00000131339.2 7881 1597 11 ENSG00000204219.8 TCEA3 chr1 23381061 23424740 - protein_coding KNOWN OTTHUMG00000003233.3 43680 3515 31 ENSG00000201805.1 RNU6-1180P chr2 113086805 113086911 + snRNA KNOWN NA 107 107 1 ENSG00000136689.17 IL1RN chr2 113107214 113134016 + protein_coding KNOWN OTTHUMG00000131341.2 26803 3256 42 ENSG00000125637.14 PSD4 chr2 113157325 113209396 + protein_coding KNOWN OTTHUMG00000153339.3 52072 13442 90 ENSG00000234174.1 AC016683.5 chr2 113171535 113175360 - antisense NOVEL OTTHUMG00000153342.1 3826 1074 4 ENSG00000189223.12 PAX8-AS1 chr2 113211522 113276581 + processed_transcript KNOWN OTTHUMG00000153340.8 65060 16398 83 ENSG00000125618.15 PAX8 chr2 113215997 113278950 - protein_coding KNOWN OTTHUMG00000128529.10 62954 7400 89 ENSG00000274877.1 RP11-65I12.1 chr2 113237595 113240825 + antisense NOVEL OTTHUMG00000171056.2 3231 3231 1 ENSG00000231292.6 IGKV1OR2-108 chr2 113406396 113406872 + IG_V_gene KNOWN OTTHUMG00000153338.2 477 353 2 ENSG00000234997.1 AC016745.3 chr2 113424495 113425324 + antisense NOVEL OTTHUMG00000153341.1 830 508 2 ENSG00000272563.1 RP11-480C16.1 chr2 113432600 113436042 + lincRNA NOVEL OTTHUMG00000186041.1 3443 3443 1 ENSG00000232482.2 RP4-654C18.1 chr1 23410832 23412146 + processed_pseudogene KNOWN OTTHUMG00000003230.2 1315 426 3 ENSG00000136682.13 CBWD2 chr2 113437691 113496189 + protein_coding KNOWN OTTHUMG00000131360.3 58499 8396 101 ENSG00000184492.6 FOXD4L1 chr2 113498665 113501155 + protein_coding KNOWN OTTHUMG00000131359.1 2491 2491 1 ENSG00000234148.2 RP11-395L14.3 chr2 113512463 113515485 + lincRNA NOVEL OTTHUMG00000184091.1 3023 745 3 ENSG00000231943.6 PGM5P4-AS1 chr2 113527568 113542672 - lincRNA NOVEL OTTHUMG00000047830.2 15105 1435 12 ENSG00000225398.2 PGM5P4 chr2 113541937 113563298 + processed_pseudogene KNOWN OTTHUMG00000047819.2 21362 496 2 ENSG00000226516.6 FAM138B chr2 113577382 113578852 + lincRNA KNOWN OTTHUMG00000047820.3 1471 1232 5 ENSG00000221055.1 MIR1302-3 chr2 113582959 113583096 - miRNA KNOWN NA 138 138 1 ENSG00000146556.13 WASH2P chr2 113588550 113599043 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000047822.4 10494 2958 17 ENSG00000276624.1 AL078621.1 chr2 113596000 113596067 + miRNA NOVEL NA 68 68 1 ENSG00000236397.3 DDX11L2 chr2 113599036 113601261 - unprocessed_pseudogene KNOWN OTTHUMG00000047823.1 2226 1398 4 ENSG00000272512.1 RP11-54O7.17 chr1 995966 998051 - lincRNA NOVEL OTTHUMG00000185581.1 2086 2086 1 ENSG00000088280.17 ASAP3 chr1 23428563 23484568 - protein_coding KNOWN OTTHUMG00000003234.7 56006 4988 137 ENSG00000279267.1 RP11-395L14.18 chr2 113605867 113607908 - TEC KNOWN OTTHUMG00000176151.1 2042 2042 1 ENSG00000240356.5 RP11-395L14.11 chr2 113610502 113627090 - transcribed_processed_pseudogene KNOWN OTTHUMG00000047825.2 16589 2128 7 ENSG00000144134.17 RABL2A chr2 113627229 113643396 + protein_coding KNOWN OTTHUMG00000047828.5 16168 6008 113 ENSG00000144158.4 RP11-395L14.17 chr2 113657908 113658675 + processed_pseudogene KNOWN OTTHUMG00000153382.1 768 768 1 ENSG00000175509.8 RP11-395L14.13 chr2 113667478 113668621 - processed_pseudogene KNOWN OTTHUMG00000047826.3 1144 698 2 ENSG00000233479.1 AC017074.1 chr2 113669166 113673191 + lincRNA NOVEL OTTHUMG00000153381.1 4026 607 4 ENSG00000227359.1 AC017074.2 chr2 113677702 113704078 - lincRNA NOVEL OTTHUMG00000153380.1 26377 561 3 ENSG00000202427.1 RNU6-744P chr2 113681111 113681217 + snRNA KNOWN NA 107 107 1 ENSG00000115084.11 SLC35F5 chr2 113705011 113756823 - protein_coding KNOWN OTTHUMG00000131361.4 51813 7445 76 ENSG00000265429.2 AC017074.3 chr2 113721272 113721379 - miRNA NOVEL NA 108 108 1 ENSG00000007968.6 E2F2 chr1 23506430 23531220 - protein_coding KNOWN OTTHUMG00000003223.1 24791 5457 9 ENSG00000244063.1 AC024704.2 chr2 113829390 113831119 - lincRNA NOVEL OTTHUMG00000153498.1 1730 416 2 ENSG00000228857.2 AC104653.1 chr2 113831049 113843356 - lincRNA NOVEL OTTHUMG00000153496.1 12308 671 5 ENSG00000270019.1 RP11-141B14.1 chr2 113888203 113889750 - lincRNA NOVEL OTTHUMG00000183982.1 1548 1548 1 ENSG00000115091.10 ACTR3 chr2 113889960 113962596 + protein_coding KNOWN OTTHUMG00000153497.7 72637 12049 48 ENSG00000279957.1 RP11-141B14.2 chr2 113904086 113905258 + TEC KNOWN OTTHUMG00000187434.1 1173 1173 1 ENSG00000234199.2 LINC01191 chr2 113979569 114007302 + lincRNA NOVEL OTTHUMG00000153529.1 27734 844 2 ENSG00000243179.1 AC110769.3 chr2 113979909 113983258 + lincRNA NOVEL OTTHUMG00000153531.1 3350 815 2 ENSG00000215984.1 AC110769.1 chr2 113990010 113990096 - miRNA NOVEL NA 87 87 1 ENSG00000212182.2 U3 chr2 114005440 114005655 - snoRNA NOVEL NA 216 216 1 ENSG00000235242.1 AC010982.2 chr2 114122274 114123293 - lincRNA NOVEL OTTHUMG00000153530.1 1020 465 2 ENSG00000280791.1 Metazoa_SRP chr1 23538035 23538313 + misc_RNA NOVEL NA 279 279 1 ENSG00000231926.1 SEPHS1P7 chr2 114260050 114261226 - processed_pseudogene KNOWN OTTHUMG00000153272.1 1177 1177 1 ENSG00000222923.1 RNU2-41P chr2 114420125 114420302 + snRNA KNOWN NA 178 178 1 ENSG00000175497.15 DPP10 chr2 114442299 115845752 + protein_coding KNOWN OTTHUMG00000153294.8 1403454 10005 159 ENSG00000280854.1 Clostridiales-1 chr2 114497253 114497396 + sRNA NOVEL NA 144 144 1 ENSG00000231538.1 DPP10-AS3 chr2 114828432 114833548 - antisense NOVEL OTTHUMG00000153281.1 5117 665 2 ENSG00000235717.1 DPP10-AS2 chr2 114833830 114835588 - antisense NOVEL OTTHUMG00000153283.1 1759 624 2 ENSG00000235026.4 DPP10-AS1 chr2 115130935 115161343 - antisense NOVEL OTTHUMG00000153346.1 30409 995 8 ENSG00000230391.1 RPSAP23 chr2 115468056 115468938 + processed_pseudogene KNOWN OTTHUMG00000153316.1 883 883 1 ENSG00000271667.1 RP11-338I24.1 chr2 116687218 116687387 - processed_pseudogene KNOWN OTTHUMG00000184508.1 170 170 1 ENSG00000224869.1 AC062016.1 chr2 116726453 116726771 - processed_pseudogene KNOWN OTTHUMG00000153307.3 319 319 1 ENSG00000235052.1 RP1-150O5.3 chr1 23549139 23550915 - lincRNA NOVEL OTTHUMG00000037485.1 1777 456 2 ENSG00000226341.1 AC062016.2 chr2 116751158 116751648 + processed_pseudogene KNOWN OTTHUMG00000153306.3 491 491 1 ENSG00000235871.1 AC062016.3 chr2 116818086 116818761 + processed_pseudogene KNOWN OTTHUMG00000153850.1 676 676 1 ENSG00000230158.1 MTND1P28 chr2 117023918 117024867 + unprocessed_pseudogene KNOWN OTTHUMG00000153403.1 950 950 1 ENSG00000230950.1 MTND2P21 chr2 117025077 117026118 + unprocessed_pseudogene KNOWN OTTHUMG00000153401.1 1042 1042 1 ENSG00000274027.1 AC012365.1 chr2 117026331 117026396 + miRNA NOVEL NA 66 66 1 ENSG00000228898.1 AC012365.3 chr2 117026537 117027024 + unprocessed_pseudogene KNOWN OTTHUMG00000153404.1 488 488 1 ENSG00000239185.1 RNU7-190P chr2 117139715 117139775 - snRNA KNOWN NA 61 61 1 ENSG00000227291.1 AC092170.1 chr2 117180892 117181562 - processed_pseudogene KNOWN OTTHUMG00000153402.1 671 356 2 ENSG00000238207.1 AC009312.1 chr2 117757563 117804174 - antisense NOVEL OTTHUMG00000141319.1 46612 592 4 ENSG00000088205.11 DDX18 chr2 117814650 117832379 + protein_coding KNOWN OTTHUMG00000058521.8 17730 7851 38 ENSG00000117318.8 ID3 chr1 23557918 23559794 - protein_coding KNOWN OTTHUMG00000003229.2 1877 1797 7 ENSG00000236255.1 AC009404.2 chr2 117833937 117841658 + lincRNA NOVEL OTTHUMG00000058513.2 7722 4058 7 ENSG00000125631.7 HTR5BP chr2 117859427 117934942 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000058516.2 75516 2278 10 ENSG00000125633.9 CCDC93 chr2 117915478 118014133 - protein_coding KNOWN OTTHUMG00000058517.5 98656 8065 83 ENSG00000224967.1 AC009303.3 chr2 117934025 117934789 - processed_pseudogene KNOWN OTTHUMG00000128951.1 765 352 2 ENSG00000235066.5 AC009303.1 chr2 117995397 118055033 + antisense NOVEL OTTHUMG00000058519.5 59637 4282 33 ENSG00000272895.1 RP11-98C1.2 chr2 117998745 117999480 + antisense NOVEL OTTHUMG00000186118.1 736 736 1 ENSG00000279227.1 AC009303.2 chr2 118014174 118015673 + TEC KNOWN OTTHUMG00000058520.1 1500 1500 1 ENSG00000243510.3 RN7SL111P chr2 118016385 118016669 + misc_RNA KNOWN NA 285 285 1 ENSG00000125629.13 INSIG2 chr2 118088452 118110997 + protein_coding KNOWN OTTHUMG00000058518.2 22546 3950 40 ENSG00000226856.4 AC093901.1 chr2 118132128 118186386 - lincRNA NOVEL OTTHUMG00000153418.1 54259 979 9 ENSG00000197880.7 MDS2 chr1 23581495 23640568 + protein_coding KNOWN OTTHUMG00000002927.1 59074 2142 17 ENSG00000258910.2 RP11-19E11.1 chr2 118833700 118835110 - lincRNA NOVEL OTTHUMG00000170896.2 1411 942 5 ENSG00000163064.6 EN1 chr2 118842171 118847678 - protein_coding KNOWN OTTHUMG00000131401.3 5508 2886 4 ENSG00000019169.10 MARCO chr2 118942166 118994660 + protein_coding KNOWN OTTHUMG00000131400.2 52495 2079 23 ENSG00000259094.1 RP11-77A13.1 chr2 118949306 118952983 - antisense NOVEL OTTHUMG00000170897.1 3678 1011 2 ENSG00000144119.3 C1QL2 chr2 119156243 119158889 - protein_coding KNOWN OTTHUMG00000153271.2 2647 2043 2 ENSG00000264833.1 RN7SL468P chr2 119169822 119170115 + misc_RNA KNOWN NA 294 294 1 ENSG00000115107.18 STEAP3 chr2 119223831 119265652 + protein_coding KNOWN OTTHUMG00000131402.2 41822 4562 23 ENSG00000229867.1 STEAP3-AS1 chr2 119244422 119249071 - antisense NOVEL OTTHUMG00000153297.1 4650 3218 2 ENSG00000186132.13 C2orf76 chr2 119302225 119366828 - protein_coding KNOWN OTTHUMG00000153298.2 64604 1548 32 ENSG00000155368.15 DBI chr2 119366921 119372560 + protein_coding KNOWN OTTHUMG00000131403.4 5640 2509 49 ENSG00000229239.2 RP11-223J15.2 chr1 23670294 23680259 + unprocessed_pseudogene KNOWN OTTHUMG00000002929.2 9966 1186 7 ENSG00000171227.6 TMEM37 chr2 119429901 119438520 + protein_coding KNOWN OTTHUMG00000153304.3 8620 2292 8 ENSG00000080293.8 SCTR chr2 119439843 119525301 - protein_coding KNOWN OTTHUMG00000131407.3 85459 3426 41 ENSG00000231013.1 AC013275.2 chr2 119476448 119487346 + antisense NOVEL OTTHUMG00000153309.1 10899 2089 5 ENSG00000163075.11 CFAP221 chr2 119544432 119662251 + protein_coding KNOWN OTTHUMG00000153310.2 117820 9655 142 ENSG00000144120.11 TMEM177 chr2 119679167 119686507 + protein_coding KNOWN OTTHUMG00000153312.1 7341 2588 13 ENSG00000229326.3 AC069154.4 chr2 119698623 119700151 + processed_pseudogene KNOWN OTTHUMG00000153311.2 1529 542 3 ENSG00000088179.7 PTPN4 chr2 119759631 119983818 + protein_coding KNOWN OTTHUMG00000131436.7 224188 12486 100 ENSG00000233741.1 AC016691.2 chr2 119993199 119993611 - processed_pseudogene KNOWN OTTHUMG00000153845.4 413 413 1 ENSG00000115109.12 EPB41L5 chr2 120013005 120179119 + protein_coding KNOWN OTTHUMG00000131433.6 166115 9281 129 ENSG00000224789.1 AC012363.4 chr2 120174885 120216544 - antisense NOVEL OTTHUMG00000153764.1 41660 575 3 ENSG00000142676.11 RPL11 chr1 23691779 23696425 + protein_coding KNOWN OTTHUMG00000002926.2 4647 1987 20 ENSG00000202046.1 Y_RNA chr2 120192245 120192357 + misc_RNA NOVEL NA 113 113 1 ENSG00000275077.1 AC012363.1 chr2 120196062 120196141 + miRNA NOVEL NA 80 80 1 ENSG00000236878.1 AC012363.7 chr2 120211054 120211715 + processed_pseudogene KNOWN OTTHUMG00000154461.1 662 662 1 ENSG00000227788.1 AC012363.8 chr2 120211727 120212862 + processed_pseudogene KNOWN OTTHUMG00000154457.1 1136 771 2 ENSG00000233286.1 MTND3P10 chr2 120212935 120213275 + processed_pseudogene KNOWN OTTHUMG00000154459.1 341 341 1 ENSG00000243104.1 AC012363.10 chr2 120213344 120213631 + processed_pseudogene KNOWN OTTHUMG00000154460.1 288 288 1 ENSG00000234065.2 MTND4P26 chr2 120213631 120214989 + processed_pseudogene KNOWN OTTHUMG00000154456.1 1359 1359 1 ENSG00000223549.1 MTND5P28 chr2 120215181 120217279 + processed_pseudogene KNOWN OTTHUMG00000154458.1 2099 1594 3 ENSG00000226479.3 TMEM185B chr2 120221278 120223408 - protein_coding KNOWN OTTHUMG00000154402.4 2131 2131 1 ENSG00000144118.12 RALB chr2 120240064 120294713 + protein_coding KNOWN OTTHUMG00000131435.20 54650 2915 36 ENSG00000203589.2 RP5-886K2.1 chr1 23705801 23706934 - processed_pseudogene KNOWN OTTHUMG00000002928.1 1134 1134 1 ENSG00000281676.1 AC012363.2 chr2 120290710 120291049 - protein_coding NOVEL NA 340 42 2 ENSG00000235840.1 AC012363.13 chr2 120319007 120326298 + lincRNA NOVEL OTTHUMG00000155116.1 7292 555 3 ENSG00000163083.5 INHBB chr2 120346143 120351808 + protein_coding KNOWN OTTHUMG00000131437.1 5666 3204 2 ENSG00000280409.1 LINC01101 chr2 120464335 120466218 - TEC KNOWN OTTHUMG00000187117.1 1884 1884 1 ENSG00000237614.1 AC073257.2 chr2 120542909 120544326 - lincRNA NOVEL OTTHUMG00000155117.1 1418 528 2 ENSG00000232140.1 AC073257.1 chr2 120553743 120558109 - lincRNA NOVEL OTTHUMG00000153753.1 4367 523 3 ENSG00000201006.1 Y_RNA chr2 120651273 120651374 + misc_RNA NOVEL NA 102 102 1 ENSG00000229774.1 AC018866.1 chr2 120686635 120710517 - lincRNA NOVEL OTTHUMG00000154317.1 23883 592 4 ENSG00000074047.19 GLI2 chr2 120735623 120992653 + protein_coding KNOWN OTTHUMG00000153741.10 257031 7406 125 ENSG00000271709.1 RP11-297J22.1 chr2 120866378 120867403 - lincRNA NOVEL OTTHUMG00000185284.1 1026 708 2 ENSG00000011007.11 TCEB3 chr1 23743155 23762059 + protein_coding KNOWN OTTHUMG00000002957.3 18905 5391 37 ENSG00000221321.1 AC016764.1 chr2 121035073 121035218 + miRNA NOVEL NA 146 146 1 ENSG00000201584.1 Y_RNA chr2 121040610 121040710 - misc_RNA NOVEL NA 101 101 1 ENSG00000234455.1 AC067960.1 chr2 121081437 121088726 - lincRNA NOVEL OTTHUMG00000153742.1 7290 812 2 ENSG00000236145.1 AC079988.3 chr2 121178327 121182580 + lincRNA NOVEL OTTHUMG00000153330.1 4254 544 2 ENSG00000115112.7 TFCP2L1 chr2 121216587 121285207 - protein_coding KNOWN OTTHUMG00000131443.2 68621 9372 19 ENSG00000232723.1 AC013399.3 chr2 121309995 121310412 + processed_pseudogene KNOWN OTTHUMG00000155142.1 418 418 1 ENSG00000074054.16 CLASP1 chr2 121337776 121649587 - protein_coding KNOWN OTTHUMG00000153331.7 311812 11052 273 ENSG00000265451.1 RP11-204L24.2 chr2 121530422 121532705 + antisense NOVEL OTTHUMG00000179705.1 2284 682 2 ENSG00000264229.1 RNU4ATAC chr2 121530881 121531007 + snRNA KNOWN NA 127 127 1 ENSG00000222467.1 Y_RNA chr2 121603073 121603164 - misc_RNA NOVEL NA 92 92 1 ENSG00000188290.9 HES4 chr1 998962 1000172 - protein_coding KNOWN OTTHUMG00000040758.2 1211 1118 12 ENSG00000236810.4 TCEB3-AS1 chr1 23760382 23778287 - antisense NOVEL OTTHUMG00000002959.1 17906 1347 7 ENSG00000236859.5 NIFK-AS1 chr2 121649650 121728208 + antisense NOVEL OTTHUMG00000153332.3 78559 2278 14 ENSG00000230993.1 RPL12P15 chr2 121658475 121658973 - processed_pseudogene KNOWN OTTHUMG00000155143.1 499 499 1 ENSG00000279721.1 RP11-416H1.2 chr2 121688203 121689714 + TEC KNOWN OTTHUMG00000185304.1 1512 1512 1 ENSG00000213239.3 NPM1P32 chr2 121708512 121709115 - processed_pseudogene KNOWN OTTHUMG00000153347.1 604 604 1 ENSG00000155438.10 NIFK chr2 121726945 121736923 - protein_coding KNOWN OTTHUMG00000131442.3 9979 2447 32 ENSG00000211460.10 TSN chr2 121737103 121767853 + protein_coding KNOWN OTTHUMG00000153334.2 30751 4407 55 ENSG00000270798.1 RP11-416H1.1 chr2 121743479 121745921 - processed_pseudogene KNOWN OTTHUMG00000184509.1 2443 204 2 ENSG00000274151.1 AC018737.1 chr2 121761827 121761935 - miRNA NOVEL NA 109 109 1 ENSG00000224655.4 AC018737.3 chr2 121790444 121796702 + lincRNA NOVEL OTTHUMG00000153333.1 6259 1451 16 ENSG00000237856.1 AC062020.2 chr2 123065321 123067722 + lincRNA NOVEL OTTHUMG00000153425.1 2402 801 2 ENSG00000057757.8 PITHD1 chr1 23778405 23788232 + protein_coding KNOWN OTTHUMG00000002960.2 9828 2186 13 ENSG00000232740.1 AC062020.1 chr2 123066151 123073481 - lincRNA NOVEL OTTHUMG00000153424.1 7331 584 3 ENSG00000226708.1 AC073409.1 chr2 123443266 123444445 - lincRNA NOVEL OTTHUMG00000153426.1 1180 269 2 ENSG00000235640.1 AC092646.1 chr2 123695302 123697396 + processed_pseudogene KNOWN OTTHUMG00000153350.1 2095 2095 1 ENSG00000227738.1 AC092646.2 chr2 123762171 123763071 + processed_pseudogene KNOWN OTTHUMG00000153349.1 901 901 1 ENSG00000279874.1 RP11-329A6.1 chr2 123850522 123850695 - TEC KNOWN OTTHUMG00000176153.1 174 174 1 ENSG00000223118.1 RN7SKP102 chr2 123869256 123869570 - misc_RNA KNOWN NA 315 315 1 ENSG00000228400.1 AC079154.1 chr2 124016858 124025173 - antisense NOVEL OTTHUMG00000153351.1 8316 542 2 ENSG00000155052.14 CNTNAP5 chr2 124025287 124915287 + protein_coding KNOWN OTTHUMG00000153356.5 890001 5446 28 ENSG00000238046.1 MTND5P22 chr2 124680722 124680916 - processed_pseudogene KNOWN OTTHUMG00000153364.1 195 195 1 ENSG00000270815.1 RP11-56O18.1 chr2 124778454 124778640 - processed_pseudogene KNOWN OTTHUMG00000184429.1 187 187 1 ENSG00000011009.9 LYPLA2 chr1 23790970 23795539 + protein_coding KNOWN OTTHUMG00000002961.3 4570 2196 76 ENSG00000252674.1 RNA5SP102 chr2 124932915 124933020 + rRNA KNOWN NA 106 106 1 ENSG00000206726.1 RNU6-259P chr2 124989219 124989325 + snRNA KNOWN NA 107 107 1 ENSG00000281413.1 AC104842.1 chr2 125127071 125127154 - miRNA NOVEL NA 84 84 1 ENSG00000235491.1 AC097499.1 chr2 125710969 125765842 + lincRNA NOVEL OTTHUMG00000153369.1 54874 668 2 ENSG00000224410.1 AC097499.2 chr2 125823108 125823315 + processed_pseudogene KNOWN OTTHUMG00000153368.1 208 208 1 ENSG00000226813.2 AC114813.1 chr2 126110099 126117985 - lincRNA NOVEL OTTHUMG00000153386.2 7887 624 4 ENSG00000235774.1 AC023347.1 chr2 126308510 126343992 + lincRNA NOVEL OTTHUMG00000153374.2 35483 920 5 ENSG00000236655.1 AC023347.2 chr2 126311466 126311927 - processed_pseudogene KNOWN OTTHUMG00000153375.1 462 462 1 ENSG00000213236.3 YWHAZP2 chr2 126557435 126558162 - processed_pseudogene KNOWN OTTHUMG00000153373.1 728 728 1 ENSG00000136732.13 GYPC chr2 126655933 126696675 + protein_coding KNOWN OTTHUMG00000131464.2 40743 3242 21 ENSG00000117308.13 GALE chr1 23795599 23800804 - protein_coding KNOWN OTTHUMG00000002958.7 5206 3978 105 ENSG00000235128.1 AC013474.4 chr2 126679622 126680420 + processed_pseudogene KNOWN OTTHUMG00000153372.1 799 799 1 ENSG00000206963.1 RNU6-675P chr2 126702839 126702942 - snRNA KNOWN NA 104 104 1 ENSG00000237524.6 AC114783.1 chr2 126898896 126902097 + processed_transcript NOVEL OTTHUMG00000153376.3 3202 1005 34 ENSG00000238788.1 RNU7-182P chr2 127017421 127017482 + snRNA KNOWN NA 62 62 1 ENSG00000260634.1 RP11-521O16.1 chr2 127024252 127025723 - lincRNA NOVEL OTTHUMG00000176160.1 1472 1472 1 ENSG00000260163.1 RP11-521O16.2 chr2 127025211 127029686 + lincRNA NOVEL OTTHUMG00000176163.1 4476 4476 1 ENSG00000136717.13 BIN1 chr2 127048027 127107355 - protein_coding KNOWN OTTHUMG00000131465.2 59329 6929 193 ENSG00000237630.1 NIFKP9 chr2 127170011 127170231 + processed_pseudogene KNOWN OTTHUMG00000153399.1 221 221 1 ENSG00000186684.11 CYP27C1 chr2 127184120 127220078 - protein_coding KNOWN OTTHUMG00000153400.1 35959 4491 16 ENSG00000226789.1 AC110926.4 chr2 127247258 127250082 + processed_pseudogene KNOWN OTTHUMG00000153396.1 2825 2825 1 ENSG00000117305.13 HMGCL chr1 23801885 23838620 - protein_coding KNOWN OTTHUMG00000002963.4 36736 5658 52 ENSG00000163161.11 ERCC3 chr2 127257290 127294176 - protein_coding KNOWN OTTHUMG00000131530.6 36887 7401 67 ENSG00000169967.15 MAP3K2 chr2 127298730 127388465 - protein_coding KNOWN OTTHUMG00000153397.1 89736 11508 37 ENSG00000200250.1 RNU6-1147P chr2 127316873 127316979 + snRNA KNOWN NA 107 107 1 ENSG00000236682.1 AC068282.3 chr2 127389130 127400580 + lincRNA NOVEL OTTHUMG00000153398.1 11451 2690 2 ENSG00000115718.16 PROC chr2 127418427 127429246 + protein_coding KNOWN OTTHUMG00000131528.4 10820 2495 49 ENSG00000264075.1 MIR4783 chr2 127423537 127423618 - miRNA KNOWN NA 82 82 1 ENSG00000163166.12 IWS1 chr2 127436207 127526886 - protein_coding KNOWN OTTHUMG00000131527.8 90680 3990 42 ENSG00000231731.6 AC010976.2 chr2 127455394 127514623 + antisense NOVEL OTTHUMG00000153411.7 59230 5510 138 ENSG00000202429.1 RNU4-48P chr2 127472234 127472415 + snRNA KNOWN NA 182 182 1 ENSG00000169994.17 MYO7B chr2 127535802 127637729 + protein_coding KNOWN OTTHUMG00000153419.10 101928 8800 170 ENSG00000179163.11 FUCA1 chr1 23845077 23868294 - protein_coding KNOWN OTTHUMG00000002965.2 23218 2047 8 ENSG00000272789.1 RP11-286H15.1 chr2 127625997 127626848 - antisense NOVEL OTTHUMG00000186042.2 852 852 1 ENSG00000072163.17 LIMS2 chr2 127638381 127681786 - protein_coding KNOWN OTTHUMG00000131529.6 43406 8489 143 ENSG00000144230.15 GPR17 chr2 127645864 127652639 + protein_coding KNOWN OTTHUMG00000131533.4 6776 2671 17 ENSG00000136709.10 WDR33 chr2 127701022 127811187 - protein_coding KNOWN OTTHUMG00000131534.6 110166 14580 47 ENSG00000173349.5 SFT2D3 chr2 127701508 127705242 + protein_coding KNOWN OTTHUMG00000131532.1 3735 3735 1 ENSG00000201470.1 RNY4P7 chr2 127798903 127798998 - misc_RNA KNOWN NA 96 96 1 ENSG00000200390.1 Y_RNA chr2 127829747 127829852 - misc_RNA NOVEL NA 106 106 1 ENSG00000274010.1 RP5-935K16.2 chr2 127840606 127841763 - processed_pseudogene KNOWN OTTHUMG00000187678.1 1158 1158 1 ENSG00000144231.9 POLR2D chr2 127843551 127858157 - protein_coding KNOWN OTTHUMG00000131531.5 14607 5226 13 ENSG00000202532.1 RNU6-395P chr2 127845236 127845341 + snRNA KNOWN NA 106 106 1 ENSG00000188822.7 CNR2 chr1 23870526 23913362 - protein_coding KNOWN OTTHUMG00000013892.1 42837 5254 2 ENSG00000244563.1 AC006011.4 chr2 127846736 127847084 - processed_pseudogene KNOWN OTTHUMG00000153427.1 349 349 1 ENSG00000273950.1 Metazoa_SRP chr2 127856890 127857147 + misc_RNA NOVEL NA 258 258 1 ENSG00000144233.8 AMMECR1L chr2 127861630 127885922 - protein_coding KNOWN OTTHUMG00000131535.1 24293 4761 16 ENSG00000272667.1 RP11-395A13.2 chr2 127886556 127887185 + lincRNA NOVEL OTTHUMG00000186044.1 630 630 1 ENSG00000204399.3 AC012306.2 chr2 127931327 127931440 + processed_pseudogene KNOWN OTTHUMG00000153434.1 114 114 1 ENSG00000136715.16 SAP130 chr2 127941217 128028120 - protein_coding KNOWN OTTHUMG00000131571.5 86904 4373 73 ENSG00000234044.1 AC108059.1 chr2 128067194 128067407 + processed_pseudogene KNOWN OTTHUMG00000153443.1 214 214 1 ENSG00000200432.1 Y_RNA chr2 128067800 128067901 + misc_RNA NOVEL NA 102 102 1 ENSG00000136731.11 UGGT1 chr2 128091200 128195677 + protein_coding KNOWN OTTHUMG00000131570.4 104478 11349 126 ENSG00000229173.1 AC108059.4 chr2 128139792 128140516 - processed_pseudogene KNOWN OTTHUMG00000153442.1 725 725 1 ENSG00000229106.1 RP11-4M23.2 chr1 23901471 23902737 - processed_pseudogene KNOWN OTTHUMG00000013894.1 1267 1267 1 ENSG00000232101.1 AC108059.2 chr2 128151154 128151304 - processed_pseudogene KNOWN OTTHUMG00000153444.1 151 151 1 ENSG00000229758.2 DYNLT3P2 chr2 128199901 128200195 + processed_pseudogene KNOWN OTTHUMG00000153544.2 295 295 1 ENSG00000185631.7 AC017079.3 chr2 128203361 128203775 + processed_pseudogene KNOWN OTTHUMG00000153541.1 415 415 1 ENSG00000238180.1 AC017079.4 chr2 128217588 128218072 + processed_pseudogene KNOWN OTTHUMG00000153543.1 485 485 1 ENSG00000136720.6 HS6ST1 chr2 128236716 128318577 - protein_coding KNOWN OTTHUMG00000153542.1 81862 4683 9 ENSG00000252742.1 Y_RNA chr2 128350829 128350927 - misc_RNA NOVEL NA 99 99 1 ENSG00000238379.1 RNA5SP103 chr2 128445081 128445198 - rRNA KNOWN NA 118 118 1 ENSG00000227653.1 ISCA1P6 chr2 128518788 128519177 - processed_pseudogene KNOWN OTTHUMG00000153415.1 390 390 1 ENSG00000237532.1 AC012451.1 chr2 128580491 128581576 - lincRNA NOVEL OTTHUMG00000153416.1 1086 357 2 ENSG00000238277.1 AC068483.1 chr2 129063846 129071725 - lincRNA NOVEL OTTHUMG00000153414.1 7880 660 2 ENSG00000232557.3 RP11-4M23.3 chr1 23907111 23907885 + antisense NOVEL OTTHUMG00000013895.3 775 210 2 ENSG00000204460.3 AC079586.1 chr2 129242173 129273848 - lincRNA NOVEL OTTHUMG00000153413.1 31676 2213 5 ENSG00000233428.1 AC019050.1 chr2 129496297 129496788 + processed_pseudogene KNOWN OTTHUMG00000153429.1 492 492 1 ENSG00000229536.1 AC079776.1 chr2 129869193 129877553 - lincRNA NOVEL OTTHUMG00000153489.2 8361 563 2 ENSG00000214100.7 AC079776.2 chr2 129922863 129934317 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000153486.4 11455 627 7 ENSG00000237574.1 AC079776.3 chr2 129923177 129946703 + lincRNA NOVEL OTTHUMG00000153485.1 23527 2398 4 ENSG00000234559.1 AC079776.4 chr2 129939848 129940217 - processed_pseudogene KNOWN OTTHUMG00000153488.1 370 370 1 ENSG00000225449.3 RAB6C-AS1 chr2 129966592 129980466 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000153499.2 13875 3949 8 ENSG00000222014.5 RAB6C chr2 129979664 129982738 + protein_coding KNOWN OTTHUMG00000153487.3 3075 3075 1 ENSG00000180178.9 FAR2P1 chr2 129990456 130051131 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000153562.4 60676 8075 27 ENSG00000250207.1 AC079776.6 chr2 129992602 129993105 - unprocessed_pseudogene KNOWN OTTHUMG00000153522.1 504 504 1 ENSG00000264926.1 MIR378F chr1 23929070 23929147 + miRNA KNOWN NA 78 78 1 ENSG00000217289.3 AC018865.5 chr2 129992889 129994040 + processed_pseudogene KNOWN OTTHUMG00000153509.1 1152 1152 1 ENSG00000231147.2 ARHGAP42P2 chr2 130006200 130009123 + unprocessed_pseudogene KNOWN OTTHUMG00000153532.2 2924 2140 8 ENSG00000231240.1 KLF2P1 chr2 130036958 130038422 + processed_pseudogene KNOWN OTTHUMG00000153624.1 1465 1042 2 ENSG00000248313.1 CYP4F27P chr2 130048426 130049440 - unprocessed_pseudogene KNOWN OTTHUMG00000153629.1 1015 494 3 ENSG00000196604.10 POTEF chr2 130073535 130129222 - protein_coding KNOWN OTTHUMG00000153628.2 55688 4371 59 ENSG00000228471.1 AC018865.11 chr2 130082092 130082220 - processed_pseudogene KNOWN OTTHUMG00000153630.1 129 129 1 ENSG00000224087.1 AC018804.3 chr2 130107684 130109741 + antisense NOVEL OTTHUMG00000153626.1 2058 578 2 ENSG00000252223.1 RNU6-1049P chr2 130109204 130109310 - snRNA KNOWN NA 107 107 1 ENSG00000223760.4 MED15P9 chr2 130129621 130139417 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000153627.2 9797 2252 10 ENSG00000152076.17 CCDC74B chr2 130139287 130145134 - protein_coding KNOWN OTTHUMG00000131629.3 5848 4487 50 ENSG00000187608.7 ISG15 chr1 1001138 1014541 + protein_coding KNOWN OTTHUMG00000040777.2 13404 942 8 ENSG00000230228.2 RP11-4M23.4 chr1 23949016 23949383 - processed_pseudogene KNOWN OTTHUMG00000013896.2 368 368 1 ENSG00000136699.18 SMPD4 chr2 130151392 130182750 - protein_coding KNOWN OTTHUMG00000131624.17 31359 7375 200 ENSG00000152082.12 MZT2B chr2 130181737 130190729 + protein_coding KNOWN OTTHUMG00000131625.2 8993 1815 21 ENSG00000265280.1 AC018804.1 chr2 130183443 130183519 + miRNA NOVEL NA 77 77 1 ENSG00000152086.8 TUBA3E chr2 130191743 130198461 - protein_coding KNOWN OTTHUMG00000131626.2 6719 1542 5 ENSG00000227632.2 AC018804.6 chr2 130202312 130212628 + unprocessed_pseudogene KNOWN OTTHUMG00000153751.1 10317 618 5 ENSG00000230756.1 RHOQP3 chr2 130212870 130213490 - processed_pseudogene KNOWN OTTHUMG00000153752.2 621 621 1 ENSG00000213225.7 AC018804.7 chr2 130229379 130232106 + transcribed_processed_pseudogene KNOWN OTTHUMG00000153749.2 2728 2728 2 ENSG00000234398.1 AC134915.1 chr2 130245971 130248770 + unprocessed_pseudogene KNOWN OTTHUMG00000154215.1 2800 574 5 ENSG00000236595.1 MED15P5 chr2 130251568 130252559 + processed_pseudogene KNOWN OTTHUMG00000153750.1 992 992 1 ENSG00000237722.1 MTND1P29 chr2 130270596 130272272 + unprocessed_pseudogene KNOWN OTTHUMG00000153776.1 1677 561 2 ENSG00000189266.10 PNRC2 chr1 23959109 23963462 + protein_coding KNOWN OTTHUMG00000013891.2 4354 2564 11 ENSG00000231954.1 MTND2P22 chr2 130272479 130273511 + unprocessed_pseudogene KNOWN OTTHUMG00000153770.1 1033 1033 1 ENSG00000277699.1 AC068137.1 chr2 130273723 130273788 + miRNA NOVEL NA 66 66 1 ENSG00000236211.1 AC068137.5 chr2 130273908 130275449 + unprocessed_pseudogene KNOWN OTTHUMG00000153771.1 1542 1542 1 ENSG00000230496.1 AC068137.6 chr2 130275592 130276257 + unprocessed_pseudogene KNOWN OTTHUMG00000153775.1 666 666 1 ENSG00000232990.2 MTATP6P7 chr2 130276507 130277187 + unprocessed_pseudogene KNOWN OTTHUMG00000153767.1 681 681 1 ENSG00000249997.1 AC068137.8 chr2 130277184 130277957 + unprocessed_pseudogene KNOWN OTTHUMG00000153777.1 774 774 1 ENSG00000230548.1 MTND4P27 chr2 130278757 130280110 + unprocessed_pseudogene KNOWN OTTHUMG00000153772.1 1354 1354 1 ENSG00000234934.1 MTND5P29 chr2 130280299 130282105 + unprocessed_pseudogene KNOWN OTTHUMG00000153769.1 1807 1807 1 ENSG00000248136.1 MTND6P8 chr2 130282085 130282606 - unprocessed_pseudogene KNOWN OTTHUMG00000153773.1 522 522 1 ENSG00000233550.1 AC068137.11 chr2 130282679 130283329 + unprocessed_pseudogene KNOWN OTTHUMG00000153774.1 651 651 1 ENSG00000188529.13 SRSF10 chr1 23964804 23980927 - protein_coding KNOWN OTTHUMG00000013893.4 16124 10277 76 ENSG00000226915.1 AC068137.13 chr2 130293822 130294405 + processed_pseudogene KNOWN OTTHUMG00000153768.1 584 584 1 ENSG00000271435.1 RP11-803A13.1 chr2 130313934 130314411 - processed_pseudogene KNOWN OTTHUMG00000184424.1 478 478 1 ENSG00000224352.1 AC132479.4 chr2 130330142 130330285 - unprocessed_pseudogene KNOWN OTTHUMG00000154217.1 144 144 1 ENSG00000136710.8 CCDC115 chr2 130338241 130342349 - protein_coding KNOWN OTTHUMG00000131631.4 4109 3782 18 ENSG00000136718.8 IMP4 chr2 130342225 130347810 + protein_coding KNOWN OTTHUMG00000131627.2 5586 3861 105 ENSG00000072135.11 PTPN18 chr2 130356007 130375409 + protein_coding KNOWN OTTHUMG00000131630.5 19403 5774 86 ENSG00000178162.7 FAR2P2 chr2 130416755 130431363 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000153927.4 14609 5364 33 ENSG00000230646.1 KLF2P2 chr2 130427731 130429225 + processed_pseudogene KNOWN OTTHUMG00000153926.1 1495 1039 2 ENSG00000239402.3 CYP4F62P chr2 130429827 130441413 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000153934.4 11587 2596 11 ENSG00000196834.10 POTEI chr2 130459455 130509666 - protein_coding KNOWN OTTHUMG00000153925.3 50212 7023 41 ENSG00000215905.4 RP11-4M23.7 chr1 24007881 24008519 - processed_pseudogene KNOWN OTTHUMG00000013926.2 639 328 2 ENSG00000251973.1 RNU6-473P chr2 130497743 130497849 - snRNA KNOWN NA 107 107 1 ENSG00000225819.1 AC013269.3 chr2 130515997 130526691 - antisense NOVEL OTTHUMG00000153978.1 10695 444 2 ENSG00000274711.1 Metazoa_SRP chr2 130517049 130517312 - misc_RNA NOVEL NA 264 264 1 ENSG00000152093.6 CFC1B chr2 130521197 130528604 + protein_coding KNOWN OTTHUMG00000153959.3 7408 1669 15 ENSG00000225341.1 AC013269.4 chr2 130530275 130537182 + antisense NOVEL OTTHUMG00000153979.1 6908 727 2 ENSG00000184761.7 AC013269.5 chr2 130539095 130549883 - protein_coding PUTATIVE OTTHUMG00000153982.2 10789 1653 5 ENSG00000183292.11 TISP43 chr2 130570829 130584161 + protein_coding NOVEL OTTHUMG00000153992.3 13333 4082 19 ENSG00000232408.1 AC140481.4 chr2 130583549 130590463 - antisense NOVEL OTTHUMG00000153993.2 6915 695 2 ENSG00000136698.7 CFC1 chr2 130592168 130599575 - protein_coding KNOWN OTTHUMG00000131628.2 7408 1669 15 ENSG00000277668.1 Metazoa_SRP chr2 130603461 130603724 + misc_RNA NOVEL NA 264 264 1 ENSG00000225315.2 RP11-293P20.2 chr1 24040835 24086799 + antisense NOVEL OTTHUMG00000003034.2 45965 454 4 ENSG00000222038.3 POTEJ chr2 130611481 130658091 + protein_coding KNOWN OTTHUMG00000154050.1 46611 3383 15 ENSG00000251757.1 RNU6-848P chr2 130622838 130622944 + snRNA KNOWN NA 107 107 1 ENSG00000214081.6 CYP4F30P chr2 130680050 130691691 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000154046.2 11642 3082 17 ENSG00000240253.4 FAR2P3 chr2 130690133 130718831 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000154049.1 28699 1722 18 ENSG00000223349.1 KLF2P3 chr2 130692243 130693770 - processed_pseudogene KNOWN OTTHUMG00000154048.2 1528 1087 2 ENSG00000173302.5 GPR148 chr2 130729070 130730336 + protein_coding KNOWN OTTHUMG00000131655.3 1267 1267 1 ENSG00000229797.1 AC140481.8 chr2 130743538 130755879 - antisense NOVEL OTTHUMG00000154047.1 12342 1078 4 ENSG00000178171.9 AMER3 chr2 130755435 130768134 + protein_coding KNOWN OTTHUMG00000131637.3 12700 6543 8 ENSG00000232503.1 CYCSP8 chr2 130776646 130776957 + processed_pseudogene KNOWN OTTHUMG00000154067.1 312 312 1 ENSG00000233221.5 AC133785.1 chr2 130830978 130836994 - antisense NOVEL OTTHUMG00000154066.2 6017 3412 4 ENSG00000142661.17 MYOM3 chr1 24056035 24112175 - protein_coding KNOWN OTTHUMG00000002969.3 56141 9254 63 ENSG00000136002.15 ARHGEF4 chr2 130836916 131047263 + protein_coding KNOWN OTTHUMG00000131657.5 210348 10003 122 ENSG00000281159.1 SCARNA15 chr2 130929762 130929883 - scaRNA NOVEL NA 122 122 1 ENSG00000281516.1 SCARNA4 chr2 130929762 130929884 - scaRNA NOVEL NA 123 123 1 ENSG00000152102.16 FAM168B chr2 131047876 131093460 - protein_coding KNOWN OTTHUMG00000153473.3 45585 5435 14 ENSG00000115762.15 PLEKHB2 chr2 131104847 131353709 + protein_coding KNOWN OTTHUMG00000131656.9 248863 6728 73 ENSG00000230450.1 NEK2P4 chr2 131177618 131178946 - processed_pseudogene KNOWN OTTHUMG00000153538.2 1329 1329 1 ENSG00000225448.1 AC009477.7 chr2 131181153 131181369 - processed_pseudogene KNOWN OTTHUMG00000153534.1 217 217 1 ENSG00000236956.1 NF1P8 chr2 131189834 131197493 - unprocessed_pseudogene KNOWN OTTHUMG00000153537.2 7660 1461 9 ENSG00000248796.1 MED15P8 chr2 131201142 131202941 - unprocessed_pseudogene KNOWN OTTHUMG00000153535.1 1800 545 4 ENSG00000188219.13 POTEE chr2 131218067 131265278 + protein_coding KNOWN OTTHUMG00000186974.1 47212 4192 67 ENSG00000230703.1 RP11-293P20.4 chr1 24066774 24083565 + antisense NOVEL OTTHUMG00000003037.1 16792 461 3 ENSG00000212199.1 RNU6-127P chr2 131229607 131229713 + snRNA KNOWN NA 107 107 1 ENSG00000231431.6 FAR2P4 chr2 131279290 131309068 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000153559.3 29779 3925 16 ENSG00000236516.1 KLF2P4 chr2 131299220 131300444 - processed_pseudogene KNOWN OTTHUMG00000153557.1 1225 1225 1 ENSG00000227817.4 ARHGAP42P1 chr2 131328176 131330857 - unprocessed_pseudogene KNOWN OTTHUMG00000153560.2 2682 1976 3 ENSG00000224425.2 AC073869.2 chr2 131352214 131353239 - processed_pseudogene KNOWN OTTHUMG00000153558.1 1026 1026 1 ENSG00000233087.6 AC073869.1 chr2 131362956 131363720 - transcribed_processed_pseudogene KNOWN OTTHUMG00000153556.2 765 765 2 ENSG00000233285.1 AC073869.13 chr2 131369062 131369711 - unprocessed_pseudogene KNOWN OTTHUMG00000153601.1 650 650 1 ENSG00000227275.1 MTND6P10 chr2 131369785 131370301 + unprocessed_pseudogene KNOWN OTTHUMG00000153555.1 517 517 1 ENSG00000235080.1 MTND5P23 chr2 131370421 131372075 - unprocessed_pseudogene KNOWN OTTHUMG00000153599.1 1655 1655 1 ENSG00000231777.1 MTND4P21 chr2 131372294 131373650 - unprocessed_pseudogene KNOWN OTTHUMG00000153572.1 1357 1357 1 ENSG00000142677.3 IL22RA1 chr1 24119771 24143121 - protein_coding KNOWN OTTHUMG00000003041.1 23351 2798 7 ENSG00000227661.1 AC073869.10 chr2 131380153 131380913 - unprocessed_pseudogene KNOWN OTTHUMG00000153571.1 761 761 1 ENSG00000236590.1 MTATP6P4 chr2 131380916 131381590 - unprocessed_pseudogene KNOWN OTTHUMG00000153570.1 675 675 1 ENSG00000234480.1 AC073869.8 chr2 131381840 131382497 - unprocessed_pseudogene KNOWN OTTHUMG00000153564.2 658 658 1 ENSG00000237910.1 AC073869.7 chr2 131382643 131384061 - unprocessed_pseudogene KNOWN OTTHUMG00000153565.2 1419 1419 1 ENSG00000234939.1 MTND2P18 chr2 131384461 131385490 - unprocessed_pseudogene KNOWN OTTHUMG00000153597.1 1030 1030 1 ENSG00000234576.1 MTND1P26 chr2 131385700 131386237 - unprocessed_pseudogene KNOWN OTTHUMG00000153566.1 538 538 1 ENSG00000226831.1 MED15P3 chr2 131395217 131395542 - processed_pseudogene KNOWN OTTHUMG00000153598.1 326 326 1 ENSG00000276460.1 RP11-109E12.4 chr2 131398439 131401250 - unprocessed_pseudogene KNOWN OTTHUMG00000187682.1 2812 800 5 ENSG00000223631.1 LINC01120 chr2 131402901 131409049 + lincRNA NOVEL OTTHUMG00000153602.1 6149 1861 4 ENSG00000214077.4 GNAQP1 chr2 131423801 131424867 - processed_pseudogene KNOWN OTTHUMG00000153563.2 1067 1067 1 ENSG00000185436.10 IFNLR1 chr1 24154157 24187959 - protein_coding KNOWN OTTHUMG00000003036.1 33803 4923 30 ENSG00000217950.4 AC073869.20 chr2 131442644 131444587 - processed_pseudogene KNOWN OTTHUMG00000153596.1 1944 1944 1 ENSG00000232742.3 RHOQP2 chr2 131460999 131461577 + processed_pseudogene KNOWN OTTHUMG00000153608.1 579 579 1 ENSG00000273073.1 RP11-109E12.1 chr2 131461821 131463615 - lincRNA NOVEL OTTHUMG00000186045.1 1795 580 2 ENSG00000173272.12 MZT2A chr2 131464900 131492743 - protein_coding KNOWN OTTHUMG00000153606.3 27844 4093 19 ENSG00000075886.10 TUBA3D chr2 131476093 131482934 + protein_coding KNOWN OTTHUMG00000153600.2 6842 1598 8 ENSG00000265575.1 MIR4784 chr2 131491160 131491236 - miRNA KNOWN NA 77 77 1 ENSG00000152117.16 AC093838.4 chr2 131492813 131521573 + transcribed_processed_pseudogene KNOWN OTTHUMG00000153607.7 28761 3914 37 ENSG00000163040.13 CCDC74A chr2 131527675 131533666 + protein_coding KNOWN OTTHUMG00000131667.4 5992 3077 38 ENSG00000224679.1 MED15P4 chr2 131535187 131536988 - unprocessed_pseudogene KNOWN OTTHUMG00000153622.1 1802 393 4 ENSG00000204434.5 POTEKP chr2 131591752 131627266 + unprocessed_pseudogene KNOWN OTTHUMG00000150373.1 35515 2688 11 ENSG00000230023.2 RP11-10N16.2 chr1 24200240 24211693 + lincRNA NOVEL OTTHUMG00000003038.2 11454 1849 3 ENSG00000251956.1 RNU6-617P chr2 131602790 131602896 + snRNA KNOWN NA 107 107 1 ENSG00000273588.1 RP11-433A19.2 chr2 131625957 131628147 + unprocessed_pseudogene KNOWN OTTHUMG00000187696.1 2191 469 2 ENSG00000224559.2 LINC01087 chr2 131637025 131649615 + lincRNA NOVEL OTTHUMG00000153621.1 12591 3516 2 ENSG00000270930.1 GRAMD4P8 chr2 131646704 131648372 - processed_pseudogene KNOWN OTTHUMG00000184418.1 1669 1115 2 ENSG00000197927.11 C2orf27A chr2 131722375 131767404 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000131666.6 45030 2566 17 ENSG00000213222.3 AC093724.2 chr2 131723253 131724279 - processed_pseudogene KNOWN OTTHUMG00000153715.1 1027 1027 1 ENSG00000186825.5 C2orf27B chr2 131794961 131801661 - lincRNA KNOWN OTTHUMG00000154614.1 6701 1325 3 ENSG00000274353.1 RP11-788A1.1 chr2 131821987 131822920 - unprocessed_pseudogene KNOWN OTTHUMG00000187698.1 934 220 2 ENSG00000229203.1 AC103564.7 chr2 131829801 131832031 - lincRNA NOVEL OTTHUMG00000153714.1 2231 562 3 ENSG00000232760.1 AC103564.6 chr2 131833783 131836532 - unprocessed_pseudogene KNOWN OTTHUMG00000153713.1 2750 1299 5 ENSG00000231702.2 RP11-54O7.10 chr1 1008076 1008229 - processed_pseudogene KNOWN OTTHUMG00000040759.3 154 154 1 ENSG00000221032.3 AL590683.1 chr1 24227917 24228030 + miRNA NOVEL NA 114 114 1 ENSG00000244337.2 AJ239322.3 chr2 131958277 131965535 + lincRNA NOVEL OTTHUMG00000154620.2 7259 575 2 ENSG00000235615.2 AJ239322.1 chr2 131964731 131979873 - lincRNA NOVEL OTTHUMG00000150221.2 15143 2209 3 ENSG00000236485.1 RP1-156L9.1 chr2 131983937 131994161 - lincRNA NOVEL OTTHUMG00000156217.1 10225 840 2 ENSG00000226886.1 AC093787.1 chr2 132037787 132037993 - processed_pseudogene KNOWN OTTHUMG00000153595.1 207 207 1 ENSG00000271179.1 RP11-629P16.1 chr2 132080290 132080755 - processed_pseudogene KNOWN OTTHUMG00000184417.1 466 466 1 ENSG00000225594.1 AC098826.4 chr2 132087289 132102564 + unprocessed_pseudogene KNOWN OTTHUMG00000153594.1 15276 471 3 ENSG00000227745.1 AC098826.5 chr2 132132856 132139429 - unprocessed_pseudogene KNOWN OTTHUMG00000153492.3 6574 651 4 ENSG00000163046.14 ANKRD30BL chr2 132147591 132257969 - protein_coding KNOWN OTTHUMG00000153491.3 110379 4947 31 ENSG00000239108.1 RNU6-1132P chr2 132152243 132152349 - snRNA KNOWN NA 107 107 1 ENSG00000202174.1 RNA5-8SP5 chr2 132253154 132253305 - rRNA KNOWN NA 152 152 1 ENSG00000266511.1 AL590683.2 chr1 24279767 24279855 - miRNA NOVEL NA 89 89 1 ENSG00000221288.1 MIR663B chr2 132256966 132257080 - miRNA KNOWN NA 115 115 1 ENSG00000233786.1 CDC27P1 chr2 132262328 132263042 + processed_pseudogene KNOWN OTTHUMG00000153604.1 715 715 1 ENSG00000230803.1 AC097532.2 chr2 132285795 132294377 - lincRNA NOVEL OTTHUMG00000153603.1 8583 322 3 ENSG00000018607.6 ZNF806 chr2 132309309 132318736 + unprocessed_pseudogene KNOWN OTTHUMG00000153932.2 9428 1774 3 ENSG00000272769.1 RP11-725P16.2 chr2 132345616 132347297 - lincRNA NOVEL OTTHUMG00000186046.1 1682 1682 1 ENSG00000230992.3 FAM201B chr2 132352722 132353318 + processed_pseudogene KNOWN OTTHUMG00000153605.1 597 597 1 ENSG00000252705.1 RNU6-175P chr2 132406752 132406858 - snRNA KNOWN NA 107 107 1 ENSG00000183840.6 GPR39 chr2 132416574 132646559 + protein_coding KNOWN OTTHUMG00000131679.2 229986 3387 7 ENSG00000232349.2 YBX1P7 chr2 132488554 132489088 - processed_pseudogene KNOWN OTTHUMG00000153549.2 535 535 1 ENSG00000200718.1 RN7SKP103 chr2 132523617 132523936 + misc_RNA KNOWN NA 320 320 1 ENSG00000232298.2 RP11-10N16.3 chr1 24307556 24321901 - antisense NOVEL OTTHUMG00000003039.1 14346 856 5 ENSG00000221142.1 AC104405.1 chr2 132523985 132524092 + miRNA NOVEL NA 108 108 1 ENSG00000150551.10 LYPD1 chr2 132644853 132671579 - protein_coding KNOWN OTTHUMG00000153609.2 26727 2412 9 ENSG00000230065.1 AC010974.3 chr2 132660526 132666990 + antisense NOVEL OTTHUMG00000153645.1 6465 374 2 ENSG00000176771.14 NCKAP5 chr2 132671799 133568463 - protein_coding KNOWN OTTHUMG00000153573.9 896665 9552 90 ENSG00000281774.1 AC010974.1 chr2 132748582 132748670 - miRNA NOVEL NA 89 89 1 ENSG00000228721.1 AC016909.2 chr2 132911096 132911261 - processed_pseudogene KNOWN OTTHUMG00000153664.1 166 166 1 ENSG00000233729.1 AC016909.1 chr2 132915557 132931494 + antisense NOVEL OTTHUMG00000153667.1 15938 1711 2 ENSG00000279512.1 RP11-575M22.1 chr2 133117004 133119052 + TEC KNOWN OTTHUMG00000187122.1 2049 2049 1 ENSG00000226953.6 AC010890.1 chr2 133264968 133284762 + antisense NOVEL OTTHUMG00000153495.3 19795 810 13 ENSG00000252688.1 RNU6-579P chr2 133333829 133333930 + snRNA KNOWN NA 102 102 1 ENSG00000158055.14 GRHL3 chr1 24319322 24364482 + protein_coding KNOWN OTTHUMG00000003040.5 45161 3940 92 ENSG00000222068.1 RN7SKP154 chr2 133391109 133391398 - misc_RNA KNOWN NA 290 290 1 ENSG00000232474.1 NCKAP5-IT1 chr2 133431666 133433897 - sense_intronic NOVEL OTTHUMG00000153666.1 2232 554 2 ENSG00000223430.1 AC011243.1 chr2 133554315 133558227 + lincRNA NOVEL OTTHUMG00000153665.1 3913 415 3 ENSG00000200708.1 RN7SKP93 chr2 133596091 133596399 + misc_RNA KNOWN NA 309 309 1 ENSG00000152127.7 MGAT5 chr2 134119983 134454621 + protein_coding KNOWN OTTHUMG00000131681.3 334639 8578 40 ENSG00000263813.1 MIR3679 chr2 134127125 134127192 + miRNA KNOWN NA 68 68 1 ENSG00000222921.1 RNA5SP104 chr2 134231195 134231312 + rRNA KNOWN NA 118 118 1 ENSG00000234060.1 EDDM3CP chr2 134319654 134320078 - processed_pseudogene KNOWN OTTHUMG00000153734.1 425 425 1 ENSG00000152128.13 TMEM163 chr2 134455759 134719000 - protein_coding KNOWN OTTHUMG00000131713.2 263242 6804 13 ENSG00000224043.6 CCNT2-AS1 chr2 134735464 134918710 - antisense NOVEL OTTHUMG00000154855.2 183247 910 11 ENSG00000001460.16 STPG1 chr1 24356999 24416934 - protein_coding KNOWN OTTHUMG00000003297.2 59936 8511 62 ENSG00000234682.1 AC110620.2 chr2 134797169 134797879 + processed_pseudogene KNOWN OTTHUMG00000153732.1 711 711 1 ENSG00000228098.1 AC110620.1 chr2 134816362 134816589 + processed_pseudogene KNOWN OTTHUMG00000153733.1 228 228 1 ENSG00000153086.12 ACMSD chr2 134838547 134902034 + protein_coding KNOWN OTTHUMG00000131711.3 63488 2785 31 ENSG00000263783.1 MIR5590 chr2 134857820 134857873 + miRNA KNOWN NA 54 54 1 ENSG00000082258.11 CCNT2 chr2 134918235 134959342 + protein_coding KNOWN OTTHUMG00000131712.3 41108 9081 67 ENSG00000176601.10 MAP3K19 chr2 134964491 135047468 - protein_coding KNOWN OTTHUMG00000074083.3 82978 6010 79 ENSG00000115839.16 RAB3GAP1 chr2 135052265 135176394 + protein_coding KNOWN OTTHUMG00000154889.2 124130 6629 108 ENSG00000208308.1 SNORA40 chr2 135136628 135136755 + snoRNA NOVEL NA 128 128 1 ENSG00000121988.16 ZRANB3 chr2 135136916 135531236 - protein_coding KNOWN OTTHUMG00000150475.4 394321 9115 135 ENSG00000235651.1 AC064850.4 chr2 135510546 135511943 - processed_pseudogene KNOWN OTTHUMG00000150476.1 1398 1398 1 ENSG00000001461.15 NIPAL3 chr1 24415794 24472976 + protein_coding KNOWN OTTHUMG00000003299.3 57183 9404 55 ENSG00000048991.15 R3HDM1 chr2 135531455 135725270 + protein_coding KNOWN OTTHUMG00000131740.10 193816 7898 197 ENSG00000201308.1 RNU6-512P chr2 135656477 135656579 - snRNA KNOWN NA 103 103 1 ENSG00000207654.3 MIR128-1 chr2 135665383 135665493 + miRNA KNOWN NA 111 111 1 ENSG00000144224.15 UBXN4 chr2 135741619 135785055 + protein_coding KNOWN OTTHUMG00000153577.1 43437 5112 46 ENSG00000115850.8 LCT chr2 135787840 135837180 - protein_coding KNOWN OTTHUMG00000131738.2 49341 6586 24 ENSG00000200664.1 Y_RNA chr2 135810169 135810279 - misc_RNA NOVEL NA 111 111 1 ENSG00000226806.1 AC011893.3 chr2 135820191 135823087 + antisense NOVEL OTTHUMG00000153579.1 2897 1862 2 ENSG00000076003.4 MCM6 chr2 135839626 135876426 - protein_coding KNOWN OTTHUMG00000131739.2 36801 4118 25 ENSG00000214070.3 AC011999.1 chr2 135897955 135898978 - processed_pseudogene KNOWN OTTHUMG00000153581.1 1024 1024 1 ENSG00000115866.9 DARS chr2 135906677 135986100 - protein_coding KNOWN OTTHUMG00000131741.6 79424 4014 66 ENSG00000117602.10 RCAN3 chr1 24502351 24541040 + protein_coding KNOWN OTTHUMG00000003298.7 38690 7077 43 ENSG00000231890.6 DARS-AS1 chr2 135985176 136022593 + antisense NOVEL OTTHUMG00000153578.5 37418 6566 114 ENSG00000237262.1 AC068492.1 chr2 136077892 136078513 + lincRNA NOVEL OTTHUMG00000153580.1 622 469 2 ENSG00000121966.6 CXCR4 chr2 136114349 136118165 - protein_coding KNOWN OTTHUMG00000153583.1 3817 2224 5 ENSG00000227347.1 HNRNPKP2 chr2 136199114 136200503 - processed_pseudogene KNOWN OTTHUMG00000153576.1 1390 1390 1 ENSG00000279024.1 RP11-1193F23.1 chr2 136230753 136233245 + TEC KNOWN OTTHUMG00000176214.1 2493 2493 1 ENSG00000230037.1 UBBP1 chr2 136329441 136329913 - processed_pseudogene KNOWN OTTHUMG00000153582.1 473 473 1 ENSG00000251976.1 RN7SKP141 chr2 136390332 136390669 + misc_RNA KNOWN NA 338 338 1 ENSG00000216081.1 AC010146.2 chr2 136544371 136544480 + miRNA NOVEL NA 110 110 1 ENSG00000229568.1 AC010146.1 chr2 136544712 136545542 + unprocessed_pseudogene KNOWN OTTHUMG00000153586.1 831 527 2 ENSG00000221762.1 AC092786.1 chr2 136645108 136645192 - miRNA NOVEL NA 85 85 1 ENSG00000264443.1 RP4-594I10.3 chr1 24538802 24556024 - lincRNA NOVEL OTTHUMG00000179435.1 17223 1445 3 ENSG00000144229.10 THSD7B chr2 136765545 137677717 + protein_coding KNOWN OTTHUMG00000153590.3 912173 6761 92 ENSG00000212425.1 RNA5SP105 chr2 137512098 137512210 - rRNA KNOWN NA 113 113 1 ENSG00000222394.2 Y_RNA chr2 137715332 137715440 + misc_RNA NOVEL NA 109 109 1 ENSG00000150540.12 HNMT chr2 137964020 138016364 + protein_coding KNOWN OTTHUMG00000131751.4 52345 4756 36 ENSG00000224231.1 AC069394.1 chr2 138101884 138105905 + lincRNA NOVEL OTTHUMG00000153616.1 4022 553 3 ENSG00000233045.1 AC097523.1 chr2 138278574 138279210 + processed_pseudogene KNOWN OTTHUMG00000153620.1 637 637 1 ENSG00000234645.3 YWHAEP5 chr2 138288029 138288793 - processed_pseudogene KNOWN OTTHUMG00000153613.1 765 765 1 ENSG00000237939.1 AC097523.3 chr2 138307319 138307970 + processed_pseudogene KNOWN OTTHUMG00000153615.1 652 652 1 ENSG00000232915.1 AC097721.1 chr2 138412066 138413318 - processed_pseudogene KNOWN OTTHUMG00000153619.1 1253 1253 1 ENSG00000228043.4 AC097721.2 chr2 138418284 138501698 - lincRNA NOVEL OTTHUMG00000153614.1 83415 1313 9 ENSG00000184454.6 NCMAP chr1 24556111 24609328 + protein_coding KNOWN OTTHUMG00000003317.2 53218 4122 8 ENSG00000230569.1 AC114763.1 chr2 138470656 138473932 + lincRNA NOVEL OTTHUMG00000153617.1 3277 826 3 ENSG00000144228.7 SPOPL chr2 138501801 138573547 + protein_coding KNOWN OTTHUMG00000153635.1 71747 6468 29 ENSG00000241772.2 AC092620.2 chr2 138569090 138574458 + 3prime_overlapping_ncrna NOVEL OTTHUMG00000153633.2 5369 1051 4 ENSG00000260059.1 RP11-231E19.1 chr2 138599663 138602426 - lincRNA NOVEL OTTHUMG00000176215.1 2764 2764 1 ENSG00000237772.1 AC092620.3 chr2 138604510 138613167 + lincRNA NOVEL OTTHUMG00000153631.1 8658 680 2 ENSG00000144227.4 NXPH2 chr2 138670772 138780348 - protein_coding KNOWN OTTHUMG00000153636.1 109577 1052 2 ENSG00000222826.1 RN7SKP286 chr2 138863597 138863895 - misc_RNA KNOWN NA 299 299 1 ENSG00000229104.1 YY1P2 chr2 138897151 138898098 + processed_pseudogene KNOWN OTTHUMG00000153634.1 948 948 1 ENSG00000232992.2 AHCYP4 chr2 138901433 138902747 - processed_pseudogene KNOWN OTTHUMG00000153632.1 1315 1315 1 ENSG00000226939.1 AC062021.1 chr2 139366165 139379147 + lincRNA NOVEL OTTHUMG00000153648.1 12983 557 4 ENSG00000227312.2 RP11-496D1.2 chr1 24563627 24563974 + processed_pseudogene KNOWN OTTHUMG00000003318.2 348 348 1 ENSG00000229131.1 AC016710.1 chr2 139469775 139477747 + lincRNA NOVEL OTTHUMG00000153649.1 7973 466 2 ENSG00000206901.1 SNORA72 chr2 139511424 139511555 + snoRNA NOVEL NA 132 132 1 ENSG00000235232.1 MRPS18BP2 chr2 139668547 139669305 + processed_pseudogene KNOWN OTTHUMG00000153647.1 759 759 1 ENSG00000228374.1 AC012497.2 chr2 139732708 139733282 - processed_pseudogene KNOWN OTTHUMG00000153646.1 575 575 1 ENSG00000223554.1 AC078851.1 chr2 139824896 139825877 - lincRNA NOVEL OTTHUMG00000153650.1 982 298 2 ENSG00000221074.1 AC078851.2 chr2 139826692 139826781 + miRNA NOVEL NA 90 90 1 ENSG00000240977.3 RN7SL283P chr2 139982684 139982986 + misc_RNA KNOWN NA 303 303 1 ENSG00000224028.1 AC073928.2 chr2 140103583 140131780 - lincRNA NOVEL OTTHUMG00000153651.1 28198 444 4 ENSG00000281595.1 AC073928.1 chr2 140105814 140105920 - miRNA NOVEL NA 107 107 1 ENSG00000227149.1 AC092156.3 chr2 140216997 140217239 - processed_pseudogene KNOWN OTTHUMG00000153663.1 243 243 1 ENSG00000224969.1 RP11-54O7.11 chr1 1011997 1013193 - antisense NOVEL OTTHUMG00000040779.1 1197 471 2 ENSG00000239106.1 Y_RNA chr1 24625411 24625513 - misc_RNA NOVEL NA 103 103 1 ENSG00000231567.1 MTND2P19 chr2 140217651 140220368 - unprocessed_pseudogene KNOWN OTTHUMG00000153661.1 2718 1012 2 ENSG00000223921.1 MTND1P27 chr2 140220584 140221485 - processed_pseudogene KNOWN OTTHUMG00000153662.1 902 902 1 ENSG00000168702.15 LRP1B chr2 140231423 142131701 - protein_coding KNOWN OTTHUMG00000131799.4 1900279 17042 217 ENSG00000277306.1 uc_338 chr2 140234737 140234923 - misc_RNA NOVEL NA 187 187 1 ENSG00000236440.1 AC117947.1 chr2 140683360 140683888 - processed_pseudogene KNOWN OTTHUMG00000153668.1 529 529 1 ENSG00000238065.1 AC010740.1 chr2 140898423 140899106 + processed_pseudogene KNOWN OTTHUMG00000153688.1 684 684 1 ENSG00000201892.1 Y_RNA chr2 140992543 140992659 + misc_RNA NOVEL NA 117 117 1 ENSG00000252015.1 RNU6-904P chr2 141167257 141167357 - snRNA KNOWN NA 101 101 1 ENSG00000233329.1 AC068287.1 chr2 141208082 141208376 - processed_pseudogene KNOWN OTTHUMG00000153692.1 295 295 1 ENSG00000281341.1 AC093859.1 chr2 141606680 141606810 - miRNA NOVEL NA 131 131 1 ENSG00000133226.15 SRRM1 chr1 24631716 24673267 + protein_coding KNOWN OTTHUMG00000003320.3 41552 8168 164 ENSG00000265224.1 AC012353.1 chr2 141638844 141638963 + miRNA NOVEL NA 120 120 1 ENSG00000266259.1 AC012003.1 chr2 141997377 141997487 + miRNA NOVEL NA 111 111 1 ENSG00000244125.1 AC078882.1 chr2 142131178 142137830 - sense_overlapping NOVEL OTTHUMG00000153687.1 6653 416 2 ENSG00000239131.1 AC016706.1 chr2 142312940 142313008 - miRNA NOVEL NA 69 69 1 ENSG00000228134.1 AC092578.1 chr2 142543418 142543975 + processed_pseudogene KNOWN OTTHUMG00000153672.2 558 558 1 ENSG00000229781.1 AC013444.1 chr2 142854095 142855998 + processed_pseudogene KNOWN OTTHUMG00000153706.2 1904 1904 1 ENSG00000115919.13 KYNU chr2 142877498 143055832 + protein_coding KNOWN OTTHUMG00000131829.4 178335 17600 78 ENSG00000270390.1 RP11-470B22.1 chr2 142947300 142948086 - processed_pseudogene KNOWN OTTHUMG00000184414.1 787 787 1 ENSG00000221169.2 AC013444.2 chr2 143005700 143005791 - miRNA NOVEL NA 92 92 1 ENSG00000075884.11 ARHGAP15 chr2 143091362 143768352 + protein_coding KNOWN OTTHUMG00000131845.8 676991 7743 68 ENSG00000169504.13 CLIC4 chr1 24745357 24844324 + protein_coding KNOWN OTTHUMG00000003327.4 98968 4495 21 ENSG00000224288.2 AC013437.2 chr2 143093056 143094164 - processed_pseudogene KNOWN OTTHUMG00000153818.2 1109 1109 1 ENSG00000226839.1 MTND6P11 chr2 143094233 143094715 + processed_pseudogene KNOWN OTTHUMG00000153842.1 483 483 1 ENSG00000224852.1 MTND5P24 chr2 143094789 143096555 - processed_pseudogene KNOWN OTTHUMG00000153819.2 1767 1767 1 ENSG00000232772.1 MTND4P22 chr2 143096839 143098007 - processed_pseudogene KNOWN OTTHUMG00000153840.1 1169 1169 1 ENSG00000236300.2 AC013437.4 chr2 143098123 143098417 - processed_pseudogene KNOWN OTTHUMG00000153839.2 295 295 1 ENSG00000227557.1 MTND3P9 chr2 143098484 143098829 - processed_pseudogene KNOWN OTTHUMG00000153937.1 346 346 1 ENSG00000225476.1 AC013437.6 chr2 143098898 143099933 - processed_pseudogene KNOWN OTTHUMG00000153838.2 1036 714 2 ENSG00000231766.1 AC013437.7 chr2 143100930 143101355 - processed_pseudogene KNOWN OTTHUMG00000153841.1 426 426 1 ENSG00000257284.1 RP11-190J23.1 chr2 143162078 143172172 - antisense NOVEL OTTHUMG00000169833.1 10095 414 4 ENSG00000228655.5 AC096558.1 chr2 143295421 143480789 - antisense NOVEL OTTHUMG00000153939.2 185369 929 11 ENSG00000238482.1 RNU6-1208P chr1 24777873 24777979 - snRNA KNOWN NA 107 107 1 ENSG00000257640.1 RP11-570L15.2 chr2 143295586 143572105 - antisense NOVEL OTTHUMG00000169834.1 276520 506 3 ENSG00000258268.1 RP11-570L15.1 chr2 143518867 143598002 - antisense NOVEL OTTHUMG00000169835.1 79136 713 5 ENSG00000231758.2 AC092652.1 chr2 143640756 143656179 - antisense NOVEL OTTHUMG00000153724.2 15424 735 5 ENSG00000257277.1 RP11-434H14.1 chr2 143676165 143741294 - antisense NOVEL OTTHUMG00000169836.1 65130 884 4 ENSG00000257226.1 CTD-2252P21.1 chr2 143766620 143776073 - antisense NOVEL OTTHUMG00000169837.1 9454 515 3 ENSG00000236356.1 AC079584.2 chr2 143799467 143819599 + lincRNA NOVEL OTTHUMG00000153725.1 20133 464 3 ENSG00000200287.1 Y_RNA chr2 143897263 143897361 + misc_RNA NOVEL NA 99 99 1 ENSG00000232377.1 AC016910.1 chr2 143937073 143964156 + antisense NOVEL OTTHUMG00000153875.1 27084 1046 3 ENSG00000121964.13 GTDC1 chr2 143938068 144332568 - protein_coding KNOWN OTTHUMG00000131835.5 394501 14162 159 ENSG00000169554.15 ZEB2 chr2 144384081 144524583 - protein_coding KNOWN OTTHUMG00000187624.5 140503 21963 158 ENSG00000020633.17 RUNX3 chr1 24899511 24965121 - protein_coding KNOWN OTTHUMG00000003316.1 65611 4523 26 ENSG00000279166.1 RP11-107E5.3 chr2 144494265 144496878 - TEC KNOWN OTTHUMG00000187625.1 2614 2614 1 ENSG00000238057.7 ZEB2-AS1 chr2 144518097 144521477 + antisense KNOWN OTTHUMG00000153879.6 3381 2683 39 ENSG00000275372.1 ZEB2_AS1_1 chr2 144518447 144518574 + misc_RNA NOVEL NA 128 128 1 ENSG00000273537.1 ZEB2_AS1_3 chr2 144520456 144520555 + misc_RNA NOVEL NA 100 100 1 ENSG00000277444.1 ZEB2_AS1_4 chr2 144521039 144521116 + misc_RNA NOVEL NA 78 78 1 ENSG00000232606.1 LINC01412 chr2 144566435 144579434 + lincRNA NOVEL OTTHUMG00000153876.1 13000 362 2 ENSG00000226674.7 TEX41 chr2 144667967 145262988 + lincRNA NOVEL OTTHUMG00000153701.9 595022 15058 492 ENSG00000234940.1 AC023128.1 chr2 144688413 144690185 - lincRNA NOVEL OTTHUMG00000153703.1 1773 799 2 ENSG00000276706.1 VIS1 chr2 144705217 144705419 + misc_RNA NOVEL NA 203 203 1 ENSG00000235352.1 AC023128.2 chr2 144754776 144755998 - processed_pseudogene KNOWN OTTHUMG00000153700.1 1223 1223 1 ENSG00000278034.1 MIR6731 chr1 24919345 24919416 - miRNA KNOWN NA 72 72 1 ENSG00000268580.1 RP11-514A9.1 chr2 144877734 144882033 - lincRNA NOVEL OTTHUMG00000182522.1 4300 821 3 ENSG00000235435.1 AC064865.1 chr2 145294277 145331847 - lincRNA NOVEL OTTHUMG00000153704.2 37571 348 5 ENSG00000214064.3 RPL6P5 chr2 145337230 145338057 + processed_pseudogene KNOWN OTTHUMG00000153705.1 828 828 1 ENSG00000225107.1 AC092484.1 chr2 145569294 145588024 - lincRNA NOVEL OTTHUMG00000153709.1 18731 833 4 ENSG00000226218.1 AC079163.1 chr2 145600907 145603423 - lincRNA NOVEL OTTHUMG00000153710.1 2517 407 3 ENSG00000234119.1 AC079248.1 chr2 145826285 145827830 - processed_pseudogene KNOWN OTTHUMG00000153721.1 1546 1546 1 ENSG00000279876.1 RP11-24J11.1 chr2 145874520 145874845 - TEC KNOWN OTTHUMG00000176216.1 326 326 1 ENSG00000233842.1 AC062031.1 chr2 145915090 145931146 + lincRNA NOVEL OTTHUMG00000153722.1 16057 747 4 ENSG00000251905.1 RNU7-2P chr2 146145156 146145217 + snRNA KNOWN NA 62 62 1 ENSG00000230559.1 RPL17P12 chr2 146194296 146194821 + processed_pseudogene KNOWN OTTHUMG00000153720.1 526 526 1 ENSG00000229162.1 RP11-84D1.1 chr1 24961345 24963097 + antisense NOVEL OTTHUMG00000003322.1 1753 820 3 ENSG00000227134.1 AC093084.1 chr2 146477427 146478113 + processed_pseudogene KNOWN OTTHUMG00000153723.1 687 687 1 ENSG00000198526.7 PABPC1P2 chr2 146587506 146589310 + processed_pseudogene KNOWN OTTHUMG00000153707.1 1805 1805 1 ENSG00000271583.1 RP11-638D14.1 chr2 146833501 146834038 - processed_pseudogene KNOWN OTTHUMG00000184515.1 538 538 1 ENSG00000231040.1 AC103881.1 chr2 146837749 146850310 + lincRNA NOVEL OTTHUMG00000153708.1 12562 806 6 ENSG00000227902.2 AC062032.1 chr2 146879909 146898218 + lincRNA NOVEL OTTHUMG00000153712.1 18310 355 5 ENSG00000207225.1 RNU6-692P chr2 147408342 147408448 + snRNA KNOWN NA 107 107 1 ENSG00000221289.2 AC013406.1 chr2 147466630 147466714 - miRNA NOVEL NA 85 85 1 ENSG00000207161.1 Y_RNA chr2 147472133 147472243 - misc_RNA NOVEL NA 111 111 1 ENSG00000202074.1 RNU6-715P chr2 147495438 147495540 - snRNA KNOWN NA 103 103 1 ENSG00000253083.1 RNA5SP106 chr2 147713455 147713554 - rRNA KNOWN NA 100 100 1 ENSG00000261025.1 RP11-84D1.2 chr1 24968423 24970865 - lincRNA NOVEL OTTHUMG00000175776.1 2443 2443 1 ENSG00000229143.1 AC009480.4 chr2 147810346 147810777 + processed_pseudogene KNOWN OTTHUMG00000153778.1 432 432 1 ENSG00000121989.13 ACVR2A chr2 147844517 147930826 + protein_coding KNOWN OTTHUMG00000150603.2 86310 6770 45 ENSG00000212389.1 RNU6-1275P chr2 147877422 147877528 + snRNA KNOWN NA 107 107 1 ENSG00000223911.1 AC009480.3 chr2 147899401 147902956 - antisense NOVEL OTTHUMG00000150604.1 3556 412 3 ENSG00000115947.12 ORC4 chr2 147930397 148021604 - protein_coding KNOWN OTTHUMG00000131849.8 91208 8915 121 ENSG00000265049.1 AC009480.1 chr2 147940980 147941071 - miRNA NOVEL NA 92 92 1 ENSG00000204406.10 MBD5 chr2 148021011 148516971 + protein_coding KNOWN OTTHUMG00000150440.8 495961 14352 85 ENSG00000281469.1 RP11-567F11.1 chr2 148044380 148044894 + TEC KNOWN OTTHUMG00000189694.1 515 515 1 ENSG00000281772.1 RP11-567F11.2 chr2 148062154 148062577 + TEC KNOWN OTTHUMG00000189695.1 424 424 1 ENSG00000212181.1 SNORA48 chr2 148260574 148260708 - snoRNA NOVEL NA 135 135 1 ENSG00000264371.1 MIR4425 chr1 25023503 25023586 + miRNA KNOWN NA 84 84 1 ENSG00000224007.1 AC019070.1 chr2 148295656 148296679 - processed_pseudogene KNOWN OTTHUMG00000153786.1 1024 1024 1 ENSG00000232238.1 AC017080.1 chr2 148595158 148595328 + processed_pseudogene KNOWN OTTHUMG00000153740.1 171 171 1 ENSG00000135999.10 EPC2 chr2 148644440 148787568 + protein_coding KNOWN OTTHUMG00000153739.4 143129 5582 31 ENSG00000222126.1 RNU2-9P chr2 148825691 148825835 - snRNA KNOWN NA 145 145 1 ENSG00000223962.1 UBBP3 chr2 148863564 148863804 - processed_pseudogene KNOWN OTTHUMG00000153738.1 241 241 1 ENSG00000231079.6 AC105402.4 chr2 148866470 148888823 - antisense NOVEL OTTHUMG00000153737.5 22354 4156 11 ENSG00000228848.3 AC105402.2 chr2 148870024 148870381 - processed_pseudogene KNOWN OTTHUMG00000153735.1 358 358 1 ENSG00000226340.1 AC105402.3 chr2 148872253 148872797 - processed_pseudogene KNOWN OTTHUMG00000153736.1 545 545 1 ENSG00000168280.15 KIF5C chr2 148875250 149026759 + protein_coding KNOWN OTTHUMG00000153779.5 151510 9215 63 ENSG00000150556.15 LYPD6B chr2 149038107 149215262 + protein_coding KNOWN OTTHUMG00000153743.3 177156 3771 65 ENSG00000233755.1 RP4-799D16.1 chr1 25043707 25113120 - lincRNA NOVEL OTTHUMG00000003326.1 69414 863 5 ENSG00000228236.2 TXNP5 chr2 149068596 149068910 - processed_pseudogene KNOWN OTTHUMG00000153761.2 315 315 1 ENSG00000224337.1 FAM8A3P chr2 149320593 149321436 + processed_pseudogene KNOWN OTTHUMG00000153744.1 844 844 1 ENSG00000187123.13 LYPD6 chr2 149329985 149474148 + protein_coding KNOWN OTTHUMG00000131852.4 144164 5033 28 ENSG00000223604.1 AC007394.3 chr2 149439897 149440427 + processed_pseudogene KNOWN OTTHUMG00000154547.2 531 531 1 ENSG00000168288.11 MMADHC chr2 149569634 149587816 - protein_coding KNOWN OTTHUMG00000155558.3 18183 2191 26 ENSG00000231969.1 AC144449.1 chr2 149587196 149848233 + antisense NOVEL OTTHUMG00000153745.1 261038 1022 3 ENSG00000207270.1 RNU6-601P chr2 149610668 149610774 - snRNA KNOWN NA 107 107 1 ENSG00000162947.4 AC007364.1 chr2 149767506 149859191 - lincRNA NOVEL OTTHUMG00000153746.2 91686 2153 7 ENSG00000230645.1 AC016682.1 chr2 150171423 150301080 + lincRNA NOVEL OTTHUMG00000153755.1 129658 368 3 ENSG00000231420.1 AC113610.1 chr2 150234892 150257007 - lincRNA NOVEL OTTHUMG00000153759.1 22116 564 3 ENSG00000240361.1 OR4G11P chr1 62948 63887 + unprocessed_pseudogene KNOWN OTTHUMG00000001095.2 940 940 1 ENSG00000188157.12 AGRN chr1 1020123 1056118 + protein_coding KNOWN OTTHUMG00000040778.3 35996 10758 104 ENSG00000233419.3 RP4-781L3.1 chr1 25125053 25125454 - processed_pseudogene KNOWN OTTHUMG00000003319.1 402 402 1 ENSG00000115963.12 RND3 chr2 150468195 150539011 - protein_coding KNOWN OTTHUMG00000131859.4 70817 3594 37 ENSG00000236049.1 AC104777.2 chr2 150552532 150572221 - lincRNA NOVEL OTTHUMG00000153754.1 19690 2528 6 ENSG00000237220.1 AC104777.3 chr2 150566134 150568080 + lincRNA NOVEL OTTHUMG00000153758.1 1947 545 3 ENSG00000232359.1 AC104777.1 chr2 150595102 150620067 - lincRNA NOVEL OTTHUMG00000153756.1 24966 568 2 ENSG00000224048.4 AC104777.4 chr2 150612381 150635348 + lincRNA NOVEL OTTHUMG00000153757.1 22968 1354 19 ENSG00000228064.1 AC023469.2 chr2 150982506 151003474 + antisense NOVEL OTTHUMG00000153782.1 20969 657 4 ENSG00000222031.1 AC023469.1 chr2 151001220 151048774 - lincRNA NOVEL OTTHUMG00000153783.1 47555 469 5 ENSG00000236885.1 AC018731.3 chr2 151117955 151186209 - lincRNA NOVEL OTTHUMG00000153781.1 68255 576 3 ENSG00000213201.3 FABP5P10 chr2 151186188 151186595 + processed_pseudogene KNOWN OTTHUMG00000153780.1 408 408 1 ENSG00000184898.6 RBM43 chr2 151247940 151261879 - protein_coding KNOWN OTTHUMG00000131866.2 13940 4717 6 ENSG00000231953.1 RP4-706G24.1 chr1 25208139 25208869 + antisense NOVEL OTTHUMG00000003323.1 731 420 2 ENSG00000123609.9 NMI chr2 151270465 151290057 - protein_coding KNOWN OTTHUMG00000131867.3 19593 3480 17 ENSG00000123610.4 TNFAIP6 chr2 151357592 151380048 + protein_coding KNOWN OTTHUMG00000131884.3 22457 1579 9 ENSG00000264684.1 MIR4773-1 chr2 151368334 151368411 + miRNA KNOWN NA 78 78 1 ENSG00000242113.3 RN7SL124P chr2 151372003 151372287 + misc_RNA KNOWN NA 285 285 1 ENSG00000080345.16 RIF1 chr2 151409883 151508013 + protein_coding KNOWN OTTHUMG00000131886.5 98131 18166 227 ENSG00000183091.18 NEB chr2 151485336 151734487 - protein_coding KNOWN OTTHUMG00000153784.15 249152 30567 1380 ENSG00000162980.15 ARL5A chr2 151788984 151828492 - protein_coding KNOWN OTTHUMG00000131887.7 39509 6716 35 ENSG00000182389.17 CACNB4 chr2 151832776 152099079 - protein_coding KNOWN OTTHUMG00000155091.5 266304 13587 108 ENSG00000225214.1 AC079790.2 chr2 152098328 152109202 + antisense NOVEL OTTHUMG00000155109.1 10875 507 2 ENSG00000115145.8 STAM2 chr2 152116801 152175992 - protein_coding KNOWN OTTHUMG00000131885.3 59192 7005 51 ENSG00000117614.8 SYF2 chr1 25222679 25232502 - protein_coding KNOWN OTTHUMG00000043610.1 9824 3370 17 ENSG00000234272.1 RPL30P2 chr2 152131555 152131845 + processed_pseudogene KNOWN OTTHUMG00000155110.1 291 291 1 ENSG00000199884.1 Y_RNA chr2 152284350 152284460 - misc_RNA NOVEL NA 111 111 1 ENSG00000157827.18 FMNL2 chr2 152335237 152649834 + protein_coding KNOWN OTTHUMG00000154035.6 314598 6519 45 ENSG00000213197.3 AC012066.1 chr2 152389937 152390630 + processed_pseudogene KNOWN OTTHUMG00000154032.1 694 694 1 ENSG00000270776.1 RP11-17G11.1 chr2 152539197 152539427 - processed_pseudogene KNOWN OTTHUMG00000184351.1 231 231 1 ENSG00000196504.14 PRPF40A chr2 152651593 152717997 - protein_coding KNOWN OTTHUMG00000154031.11 66405 9536 89 ENSG00000177917.9 ARL6IP6 chr2 152717893 152761253 + protein_coding KNOWN OTTHUMG00000131901.4 43361 3349 21 ENSG00000234932.2 AC009969.1 chr2 152850653 152850824 - processed_pseudogene KNOWN OTTHUMG00000154033.2 172 172 1 ENSG00000226213.1 UBQLN4P2 chr2 152876820 152877767 + processed_pseudogene KNOWN OTTHUMG00000154034.1 948 948 1 ENSG00000214025.2 ATP5F1P4 chr2 153158938 153159683 + processed_pseudogene KNOWN OTTHUMG00000153824.1 746 746 1 ENSG00000117616.16 RSRP1 chr1 25242237 25338213 - protein_coding KNOWN OTTHUMG00000043611.5 95977 6804 74 ENSG00000224612.1 AC011901.2 chr2 153171987 153201726 - lincRNA NOVEL OTTHUMG00000153822.1 29740 383 4 ENSG00000226338.1 AC079150.2 chr2 153208086 153208163 - processed_pseudogene KNOWN OTTHUMG00000153826.1 78 78 1 ENSG00000227708.1 AC079150.3 chr2 153337705 153357422 + lincRNA NOVEL OTTHUMG00000153820.1 19718 357 4 ENSG00000214024.2 AC012501.1 chr2 153370612 153371064 + processed_pseudogene KNOWN OTTHUMG00000153823.1 453 453 1 ENSG00000242575.1 AC012501.3 chr2 153420677 153421957 - transcribed_processed_pseudogene KNOWN OTTHUMG00000153825.2 1281 1281 1 ENSG00000227400.2 AC012501.2 chr2 153421616 153593288 - sense_overlapping NOVEL OTTHUMG00000153821.1 171673 984 7 ENSG00000200377.1 SNORD56 chr2 153446813 153446883 - snoRNA NOVEL NA 71 71 1 ENSG00000177519.3 RPRM chr2 153477338 153478808 - protein_coding KNOWN OTTHUMG00000131905.1 1471 1471 1 ENSG00000236917.1 DNAJA1P2 chr2 153761450 153762646 - processed_pseudogene KNOWN OTTHUMG00000153846.1 1197 1197 1 ENSG00000144278.13 GALNT13 chr2 153871913 154453849 + protein_coding KNOWN OTTHUMG00000131917.2 581937 6520 58 ENSG00000272432.1 RP3-465N24.6 chr1 25247837 25248321 + lincRNA NOVEL OTTHUMG00000185697.1 485 485 1 ENSG00000215934.2 AC008166.1 chr2 154146105 154146207 - miRNA NOVEL NA 103 103 1 ENSG00000212001.2 AC009297.1 chr2 154231718 154231829 + miRNA NOVEL NA 112 112 1 ENSG00000230251.1 PHBP4 chr2 154286589 154287425 + processed_pseudogene KNOWN OTTHUMG00000153847.2 837 837 1 ENSG00000224675.1 AC009227.2 chr2 154435853 154457438 - antisense NOVEL OTTHUMG00000153848.2 21586 2362 5 ENSG00000238004.1 AC009227.3 chr2 154459857 154460820 + lincRNA NOVEL OTTHUMG00000153849.1 964 511 2 ENSG00000223290.1 RNA5SP107 chr2 154590407 154590528 + rRNA KNOWN NA 122 122 1 ENSG00000235949.1 AC061961.2 chr2 154696462 154697817 - antisense NOVEL OTTHUMG00000153808.1 1356 432 2 ENSG00000162989.4 KCNJ3 chr2 154698299 154858352 + protein_coding KNOWN OTTHUMG00000131937.2 160054 5067 8 ENSG00000228837.2 CBX3P6 chr2 154940541 154941067 - processed_pseudogene KNOWN OTTHUMG00000150419.1 527 527 1 ENSG00000230991.1 AC092625.1 chr2 154965513 154968003 - lincRNA NOVEL OTTHUMG00000153807.1 2491 393 2 ENSG00000261349.1 RP3-465N24.5 chr1 25266102 25267136 - unprocessed_pseudogene KNOWN OTTHUMG00000173028.1 1035 459 2 ENSG00000223197.1 RNU6-1001P chr2 155089439 155089538 - snRNA KNOWN NA 100 100 1 ENSG00000232982.1 AC092662.2 chr2 155263458 155263724 - processed_pseudogene KNOWN OTTHUMG00000153812.1 267 267 1 ENSG00000229701.1 MTND2P20 chr2 155264163 155264823 - processed_pseudogene KNOWN OTTHUMG00000153817.1 661 661 1 ENSG00000227682.2 ATP5A1P2 chr2 155269633 155270134 + transcribed_processed_pseudogene KNOWN OTTHUMG00000153811.3 502 502 2 ENSG00000233709.1 MTND4P28 chr2 155311023 155311409 + processed_pseudogene KNOWN OTTHUMG00000153816.1 387 387 1 ENSG00000233039.1 MTND5P30 chr2 155311697 155313427 + processed_pseudogene KNOWN OTTHUMG00000153814.1 1731 1731 1 ENSG00000233248.1 MTND6P9 chr2 155313440 155313958 - processed_pseudogene KNOWN OTTHUMG00000153813.1 519 519 1 ENSG00000229935.1 AC092662.6 chr2 155314066 155314368 + processed_pseudogene KNOWN OTTHUMG00000153815.1 303 303 1 ENSG00000206718.1 RNU6-546P chr2 155330421 155330527 + snRNA KNOWN NA 107 107 1 ENSG00000226383.4 AC093375.1 chr2 156011617 156024613 - lincRNA NOVEL OTTHUMG00000153834.1 12997 2006 8 ENSG00000187010.17 RHD chr1 25272393 25330445 + protein_coding KNOWN OTTHUMG00000003476.7 58053 3313 97 ENSG00000235548.1 AC073551.1 chr2 156033247 156034080 - processed_pseudogene KNOWN OTTHUMG00000153835.1 834 834 1 ENSG00000153234.12 NR4A2 chr2 156324432 156342348 - protein_coding KNOWN OTTHUMG00000131950.7 17917 3967 62 ENSG00000115159.14 GPD2 chr2 156435290 156613735 + protein_coding KNOWN OTTHUMG00000131951.5 178446 7155 127 ENSG00000238069.1 RPLP0P7 chr2 156777706 156778372 - processed_pseudogene KNOWN OTTHUMG00000153844.1 667 667 1 ENSG00000281222.1 AC096589.1 chr2 156932168 156932264 - miRNA NOVEL NA 97 97 1 ENSG00000263848.1 AC108057.1 chr2 157015172 157015257 - miRNA NOVEL NA 86 86 1 ENSG00000213194.3 AC016732.2 chr2 157210847 157211539 - processed_pseudogene KNOWN OTTHUMG00000133576.1 693 693 1 ENSG00000136542.7 GALNT5 chr2 157257598 157314211 + protein_coding KNOWN OTTHUMG00000131965.2 56614 6818 14 ENSG00000222404.1 RN7SKP281 chr2 157298807 157299158 - misc_RNA KNOWN NA 352 352 1 ENSG00000136541.13 ERMN chr2 157318625 157327713 - protein_coding KNOWN OTTHUMG00000153843.5 9089 4393 33 ENSG00000224183.1 SDHDP6 chr1 25294164 25294643 - processed_pseudogene KNOWN OTTHUMG00000003481.1 480 480 1 ENSG00000230562.3 FAM133DP chr2 157379724 157380414 - processed_pseudogene KNOWN OTTHUMG00000153949.1 691 691 1 ENSG00000115165.8 CYTIP chr2 157414619 157488961 - protein_coding KNOWN OTTHUMG00000154551.5 74343 3428 51 ENSG00000123612.14 ACVR1C chr2 157526767 157629005 - protein_coding KNOWN OTTHUMG00000131964.3 102239 9195 33 ENSG00000234584.1 AC019186.1 chr2 157725708 157736005 - lincRNA NOVEL OTTHUMG00000153914.1 10298 545 2 ENSG00000115170.12 ACVR1 chr2 157736444 157875862 - protein_coding KNOWN OTTHUMG00000131967.9 139419 3990 70 ENSG00000007001.11 UPP2 chr2 157876702 158136154 + protein_coding KNOWN OTTHUMG00000131969.3 259453 2957 23 ENSG00000270557.1 RP11-546J1.1 chr2 157877683 157878565 + lincRNA NOVEL OTTHUMG00000185078.1 883 883 1 ENSG00000251980.1 RNU6-436P chr2 157912772 157912885 + snRNA KNOWN NA 114 114 1 ENSG00000271320.1 RP11-1152H14.1 chr2 157917712 157918371 + lincRNA NOVEL OTTHUMG00000185079.1 660 660 1 ENSG00000228937.1 AC005539.2 chr2 157961410 157962888 - processed_pseudogene KNOWN OTTHUMG00000153913.1 1479 1479 1 ENSG00000259984.1 RP11-335G20.7 chr1 25336429 25337465 - unprocessed_pseudogene KNOWN OTTHUMG00000173029.1 1037 459 2 ENSG00000212410.1 RNU6-932P chr2 157985789 157985894 - snRNA KNOWN NA 106 106 1 ENSG00000231158.1 PTP4A1P1 chr2 158065545 158066059 + processed_pseudogene KNOWN OTTHUMG00000153916.1 515 515 1 ENSG00000237327.1 UPP2-IT1 chr2 158127957 158133988 + sense_intronic NOVEL OTTHUMG00000153915.1 6032 357 2 ENSG00000227480.2 CCDC148-AS1 chr2 158166650 158236169 + antisense NOVEL OTTHUMG00000153964.2 69520 795 5 ENSG00000153237.16 CCDC148 chr2 158171081 158456753 - protein_coding KNOWN OTTHUMG00000153973.1 285673 3790 77 ENSG00000234890.1 HNRNPDLP2 chr2 158419955 158425303 + unprocessed_pseudogene KNOWN OTTHUMG00000153974.1 5349 751 2 ENSG00000243723.3 RN7SL393P chr2 158447166 158447461 - misc_RNA KNOWN NA 296 296 1 ENSG00000144283.20 PKP4 chr2 158456964 158682879 + protein_coding KNOWN OTTHUMG00000153969.5 225916 9525 170 ENSG00000227331.1 AC005042.2 chr2 158548425 158549224 + processed_pseudogene KNOWN OTTHUMG00000153963.1 800 800 1 ENSG00000281472.1 AC005042.1 chr2 158551490 158552155 - protein_coding NOVEL NA 666 39 2 ENSG00000183726.9 TMEM50A chr1 25337917 25362361 + protein_coding KNOWN OTTHUMG00000007651.1 24445 3410 32 ENSG00000204380.3 AC005042.4 chr2 158658337 158735002 - antisense NOVEL OTTHUMG00000153965.2 76666 5874 8 ENSG00000228586.1 AC005042.5 chr2 158685903 158753775 + lincRNA NOVEL OTTHUMG00000153971.1 67873 510 3 ENSG00000231675.1 AC005042.3 chr2 158703287 158703460 + processed_pseudogene KNOWN OTTHUMG00000153967.1 174 174 1 ENSG00000163331.9 DAPL1 chr2 158795317 158862958 + protein_coding KNOWN OTTHUMG00000153970.1 67642 1505 23 ENSG00000243792.1 OR7E89P chr2 158853755 158854576 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000153966.1 822 822 1 ENSG00000251491.2 OR7E28P chr2 158862311 158863285 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000153968.2 975 975 1 ENSG00000188668.4 OR7E90P chr2 158874642 158875670 + unprocessed_pseudogene KNOWN OTTHUMG00000153972.1 1029 1029 1 ENSG00000222300.1 RNU2-21P chr2 158935798 158935985 - snRNA KNOWN NA 188 188 1 ENSG00000115183.12 TANC1 chr2 158968634 159232659 + protein_coding KNOWN OTTHUMG00000153945.2 264026 14921 54 ENSG00000213189.5 BTF3L4P2 chr2 159003975 159004320 + processed_pseudogene KNOWN OTTHUMG00000153946.2 346 346 1 ENSG00000242590.1 RP11-54O7.14 chr1 1055033 1056116 + sense_intronic NOVEL OTTHUMG00000040780.1 1084 402 2 ENSG00000188672.15 RHCE chr1 25362249 25430192 - protein_coding KNOWN OTTHUMG00000007650.4 67944 2433 95 ENSG00000202029.1 RNU6-580P chr2 159027036 159027142 - snRNA KNOWN NA 107 107 1 ENSG00000226878.1 GSTM3P2 chr2 159056094 159056859 - processed_pseudogene KNOWN OTTHUMG00000154040.2 766 441 2 ENSG00000275141.1 MIR6888 chr2 159186835 159186901 + miRNA KNOWN NA 67 67 1 ENSG00000196151.9 WDSUB1 chr2 159235793 159286799 - protein_coding KNOWN OTTHUMG00000132028.3 51007 2135 50 ENSG00000123636.16 BAZ2B chr2 159318979 159616692 - protein_coding KNOWN OTTHUMG00000132027.7 297714 20370 161 ENSG00000223642.6 AC008277.1 chr2 159386367 159404636 + antisense NOVEL OTTHUMG00000154042.4 18270 1512 16 ENSG00000270893.1 RP11-311B14.1 chr2 159444117 159444913 + processed_pseudogene KNOWN OTTHUMG00000184262.1 797 797 1 ENSG00000225369.1 AC009506.2 chr2 159462417 159463256 - processed_pseudogene KNOWN OTTHUMG00000154043.2 840 840 1 ENSG00000207117.1 Y_RNA chr2 159536244 159536346 - misc_RNA NOVEL NA 103 103 1 ENSG00000224152.1 AC009506.1 chr2 159615296 159617082 + antisense NOVEL OTTHUMG00000154041.1 1787 1494 2 ENSG00000238084.4 RP3-469D22.1 chr1 25398721 25399198 + processed_pseudogene KNOWN OTTHUMG00000003482.3 478 478 1 ENSG00000226266.5 AC009961.3 chr2 159670708 159712435 - lincRNA NOVEL OTTHUMG00000154081.2 41728 2724 9 ENSG00000230783.1 AC009961.2 chr2 159689217 159690291 - processed_pseudogene KNOWN OTTHUMG00000154070.2 1075 765 2 ENSG00000136536.13 MARCH7 chr2 159712457 159771027 + protein_coding KNOWN OTTHUMG00000132029.5 58571 6288 57 ENSG00000241399.5 CD302 chr2 159768630 159798255 - protein_coding KNOWN OTTHUMG00000154080.1 29626 4075 23 ENSG00000248672.4 LY75-CD302 chr2 159771851 159904710 - protein_coding KNOWN OTTHUMG00000161661.1 132860 5650 77 ENSG00000054219.10 LY75 chr2 159803355 159904749 - protein_coding KNOWN OTTHUMG00000132025.3 101395 8798 52 ENSG00000227055.1 AC009961.5 chr2 159812234 159814009 - processed_pseudogene KNOWN OTTHUMG00000154179.1 1776 251 2 ENSG00000153246.10 PLA2R1 chr2 159932006 160062610 - protein_coding KNOWN OTTHUMG00000154087.2 130605 9805 61 ENSG00000115221.9 ITGB6 chr2 160099666 160271888 - protein_coding KNOWN OTTHUMG00000132026.4 172223 6357 106 ENSG00000153250.16 RBMS1 chr2 160272151 160493794 - protein_coding KNOWN OTTHUMG00000132031.8 221644 11765 125 ENSG00000204178.8 TMEM57 chr1 25430858 25500209 + protein_coding KNOWN OTTHUMG00000003473.3 69352 3979 23 ENSG00000263948.1 MIR4785 chr2 160407810 160407882 - miRNA KNOWN NA 73 73 1 ENSG00000279844.1 RP11-20F18.1 chr2 160849313 160850676 - TEC KNOWN OTTHUMG00000176253.1 1364 1364 1 ENSG00000244372.3 RN7SL423P chr2 160877547 160877850 + misc_RNA KNOWN NA 304 304 1 ENSG00000232337.1 AC009313.2 chr2 161048606 161050546 - processed_pseudogene KNOWN OTTHUMG00000153885.1 1941 1941 1 ENSG00000224467.1 AC009313.1 chr2 161096231 161160224 - antisense NOVEL OTTHUMG00000151886.1 63994 503 3 ENSG00000136560.12 TANK chr2 161136908 161236221 + protein_coding KNOWN OTTHUMG00000132037.4 99314 5579 119 ENSG00000235724.7 AC009299.2 chr2 161222785 161308303 - antisense NOVEL OTTHUMG00000151884.5 85519 3048 40 ENSG00000227403.1 AC009299.3 chr2 161244739 161249050 + lincRNA NOVEL OTTHUMG00000151885.1 4312 2377 5 ENSG00000225813.1 AC009299.4 chr2 161281902 161282618 + processed_pseudogene KNOWN OTTHUMG00000153884.1 717 717 1 ENSG00000115233.10 PSMD14 chr2 161308038 161411717 + protein_coding KNOWN OTTHUMG00000153882.1 103680 7698 28 ENSG00000157978.10 LDLRAP1 chr1 25543580 25568886 + protein_coding KNOWN OTTHUMG00000007386.5 25307 5397 31 ENSG00000232320.6 AC009299.5 chr2 161340816 161341326 - processed_pseudogene KNOWN OTTHUMG00000153886.2 511 511 1 ENSG00000221590.1 AC009299.1 chr2 161350217 161350360 - miRNA NOVEL NA 144 144 1 ENSG00000271924.1 5S_rRNA chr2 161409554 161409670 + rRNA NOVEL NA 117 117 1 ENSG00000136535.13 TBR1 chr2 161416094 161425870 + protein_coding KNOWN OTTHUMG00000153888.1 9777 9600 25 ENSG00000224076.4 AC009487.4 chr2 161422659 161423577 - antisense NOVEL OTTHUMG00000153883.1 919 619 4 ENSG00000251621.1 AC009487.5 chr2 161424015 161428774 + 3prime_overlapping_ncrna NOVEL OTTHUMG00000153887.3 4760 560 2 ENSG00000144290.15 SLC4A10 chr2 161424332 161985282 + protein_coding KNOWN OTTHUMG00000153938.4 560951 7550 199 ENSG00000280105.1 RP11-334E15.1 chr2 161433874 161437458 + TEC KNOWN OTTHUMG00000185593.1 3585 3585 1 ENSG00000226121.2 AC009487.6 chr2 161500885 161507705 - processed_pseudogene KNOWN OTTHUMG00000153889.1 6821 6821 1 ENSG00000238570.1 snoU13 chr2 161558544 161558646 + snoRNA NOVEL NA 103 103 1 ENSG00000225643.1 RP11-70P17.1 chr1 25581478 25590356 + lincRNA NOVEL OTTHUMG00000004419.1 8879 483 2 ENSG00000226946.1 AC062022.1 chr2 161568502 161570185 - processed_pseudogene KNOWN OTTHUMG00000153860.3 1684 1684 1 ENSG00000235716.1 KRT18P46 chr2 161580072 161581350 + processed_pseudogene KNOWN OTTHUMG00000154324.1 1279 1279 1 ENSG00000274743.1 AC092841.2 chr2 161893892 161893949 + miRNA NOVEL NA 58 58 1 ENSG00000253046.1 AC092841.1 chr2 161918782 161918866 + miRNA NOVEL NA 85 85 1 ENSG00000234732.1 RPEP5 chr2 161931199 161931466 - processed_pseudogene KNOWN OTTHUMG00000153862.1 268 268 1 ENSG00000197635.8 DPP4 chr2 161992241 162074542 - protein_coding KNOWN OTTHUMG00000132056.13 82302 5009 131 ENSG00000230918.1 AC008063.2 chr2 162073256 162075169 + antisense NOVEL OTTHUMG00000153863.1 1914 640 3 ENSG00000231445.1 TIMM8AP1 chr2 162077357 162077651 - processed_pseudogene KNOWN OTTHUMG00000154346.1 295 295 1 ENSG00000224674.1 EIF3EP2 chr2 162088259 162090072 + processed_pseudogene KNOWN OTTHUMG00000154397.1 1814 1814 1 ENSG00000233397.1 AC008063.3 chr2 162093429 162094854 + lincRNA NOVEL OTTHUMG00000153861.1 1426 619 2 ENSG00000117643.13 MAN1C1 chr1 25617468 25786207 + protein_coding KNOWN OTTHUMG00000004417.3 168740 9026 67 ENSG00000274689.1 AC007750.1 chr2 162121731 162121816 - miRNA NOVEL NA 86 86 1 ENSG00000115263.13 GCG chr2 162142873 162152404 - protein_coding KNOWN OTTHUMG00000153892.4 9532 2387 20 ENSG00000236841.6 AC007750.5 chr2 162159762 162173223 + antisense NOVEL OTTHUMG00000153891.4 13462 4157 8 ENSG00000078098.12 FAP chr2 162170684 162245151 - protein_coding KNOWN OTTHUMG00000153890.7 74468 7003 142 ENSG00000115267.5 IFIH1 chr2 162267079 162318703 - protein_coding KNOWN OTTHUMG00000132055.3 51625 4528 20 ENSG00000115271.9 GCA chr2 162318840 162371595 + protein_coding KNOWN OTTHUMG00000132057.8 52756 3664 59 ENSG00000184611.10 KCNH7 chr2 162371407 162838730 - protein_coding KNOWN OTTHUMG00000132069.4 467324 4974 50 ENSG00000212312.1 RNA5SP109 chr2 162496936 162497051 + rRNA KNOWN NA 116 116 1 ENSG00000237750.2 AC007740.1 chr2 162768936 162797972 + antisense NOVEL OTTHUMG00000153947.2 29037 2999 5 ENSG00000230282.1 RPL7P61 chr2 163152251 163153307 - processed_pseudogene KNOWN OTTHUMG00000153910.1 1057 751 2 ENSG00000233478.1 RP1-187B23.1 chr1 25644544 25659111 - antisense NOVEL OTTHUMG00000004418.1 14568 2224 2 ENSG00000200902.1 RNU6-627P chr2 163288995 163289096 + snRNA KNOWN NA 102 102 1 ENSG00000182263.12 FIGN chr2 163593396 163736012 - protein_coding KNOWN OTTHUMG00000074059.4 142617 9942 8 ENSG00000237844.1 AC092684.1 chr2 163749573 164352223 - lincRNA NOVEL OTTHUMG00000153912.2 602651 714 5 ENSG00000226847.1 PRPS1P1 chr2 164213539 164214414 + processed_pseudogene KNOWN OTTHUMG00000153936.1 876 876 1 ENSG00000229641.1 CYP2C56P chr2 164321933 164322223 + processed_pseudogene KNOWN OTTHUMG00000153935.1 291 291 1 ENSG00000264074.1 AC110086.1 chr2 164423525 164423606 + miRNA NOVEL NA 82 82 1 ENSG00000115290.8 GRB14 chr2 164492812 164621848 - protein_coding KNOWN OTTHUMG00000132135.6 129037 2958 53 ENSG00000277998.1 RP11-452N17.1 chr2 164573741 164574054 + unprocessed_pseudogene KNOWN OTTHUMG00000187699.1 314 314 1 ENSG00000082438.14 COBLL1 chr2 164653624 164843679 - protein_coding KNOWN OTTHUMG00000074019.7 190056 17178 166 ENSG00000224331.2 AC019181.3 chr2 164687287 164687596 - processed_pseudogene KNOWN OTTHUMG00000153943.1 310 310 1 ENSG00000162430.15 SEPN1 chr1 25800176 25818224 + protein_coding KNOWN OTTHUMG00000007375.3 18049 4424 47 ENSG00000206869.1 SNORA70F chr2 164687643 164687777 - snoRNA KNOWN NA 135 135 1 ENSG00000233255.1 AC019181.2 chr2 164840749 164849334 + antisense NOVEL OTTHUMG00000153942.1 8586 567 2 ENSG00000199508.1 RNA5SP110 chr2 164858432 164858546 + rRNA KNOWN NA 115 115 1 ENSG00000223318.1 RNA5SP111 chr2 164895677 164895777 - rRNA KNOWN NA 101 101 1 ENSG00000169507.8 SLC38A11 chr2 164896186 164955525 - protein_coding KNOWN OTTHUMG00000132144.2 59340 5552 68 ENSG00000236283.2 AC013463.2 chr2 164912312 165208261 + antisense NOVEL OTTHUMG00000153999.3 295950 3006 42 ENSG00000153253.14 SCN3A chr2 165087522 165204067 - protein_coding KNOWN OTTHUMG00000044171.4 116546 9807 120 ENSG00000136531.12 SCN2A chr2 165239402 165392310 + protein_coding KNOWN OTTHUMG00000044172.4 152909 12429 147 ENSG00000233204.1 MAPRE1P3 chr2 165285253 165286048 + processed_pseudogene KNOWN OTTHUMG00000153998.1 796 796 1 ENSG00000178662.14 CSRNP3 chr2 165469647 165689407 + protein_coding KNOWN OTTHUMG00000132145.2 219761 12565 32 ENSG00000255054.3 RP1-317E23.6 chr1 25811470 25823744 + protein_coding NOVEL OTTHUMG00000167136.2 12275 792 7 ENSG00000115339.12 GALNT3 chr2 165747591 165794682 - protein_coding KNOWN OTTHUMG00000132157.9 47092 4686 46 ENSG00000235192.1 AC009495.2 chr2 165794851 165810010 + lincRNA NOVEL OTTHUMG00000154036.1 15160 779 3 ENSG00000229195.1 AC009495.4 chr2 165794857 165846091 - lincRNA NOVEL OTTHUMG00000154038.1 51235 372 2 ENSG00000221234.1 AC009495.1 chr2 165814215 165814354 + miRNA NOVEL NA 140 140 1 ENSG00000232411.1 AC009495.3 chr2 165833048 165839098 - lincRNA NOVEL OTTHUMG00000154037.1 6051 506 3 ENSG00000123607.13 TTC21B chr2 165857475 165953843 - protein_coding KNOWN OTTHUMG00000154083.1 96369 7538 67 ENSG00000224490.4 TTC21B-AS1 chr2 165933857 165949891 + processed_transcript NOVEL OTTHUMG00000154082.1 16035 2558 11 ENSG00000236107.6 AC010127.3 chr2 165957399 166301784 + antisense NOVEL OTTHUMG00000154045.6 344386 5453 75 ENSG00000144285.14 SCN1A chr2 165989160 166128047 - protein_coding KNOWN OTTHUMG00000044173.8 138888 9312 118 ENSG00000238813.1 Y_RNA chr2 166123494 166123597 - misc_RNA NOVEL NA 104 104 1 ENSG00000228172.4 RP1-317E23.3 chr1 25816749 25820797 - antisense NOVEL OTTHUMG00000007376.2 4049 2793 9 ENSG00000222376.1 RN7SKP152 chr2 166180652 166180966 - misc_RNA KNOWN NA 315 315 1 ENSG00000169432.13 SCN9A chr2 166195185 166375993 - protein_coding KNOWN OTTHUMG00000154044.1 180809 10364 103 ENSG00000136546.12 SCN7A chr2 166403573 166494247 - protein_coding KNOWN OTTHUMG00000154078.1 90675 8196 130 ENSG00000163092.18 XIRP2 chr2 166888487 167259753 + protein_coding KNOWN OTTHUMG00000154027.3 371267 13031 62 ENSG00000225182.1 AC092601.1 chr2 166889502 166889884 - processed_pseudogene KNOWN OTTHUMG00000153956.2 383 383 1 ENSG00000254552.1 XIRP2-AS1 chr2 167123904 167140955 - antisense NOVEL OTTHUMG00000165270.1 17052 776 2 ENSG00000228222.1 AC074363.1 chr2 167293171 167558333 + lincRNA NOVEL OTTHUMG00000154028.1 265163 462 3 ENSG00000238357.1 RNU7-148P chr2 167631480 167631541 - snRNA KNOWN NA 62 62 1 ENSG00000214211.2 CTAGE14P chr2 167713663 167716065 - processed_pseudogene KNOWN OTTHUMG00000154029.1 2403 2403 1 ENSG00000235335.2 AC016723.4 chr2 167814774 167941144 - antisense NOVEL OTTHUMG00000153961.3 126371 922 7 ENSG00000217801.8 RP11-465B22.3 chr1 1059734 1069355 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000000629.3 9622 2171 23 ENSG00000117640.16 MTFR1L chr1 25818640 25832942 + protein_coding KNOWN OTTHUMG00000007377.5 14303 5817 129 ENSG00000172318.5 B3GALT1 chr2 167868948 167874041 + protein_coding KNOWN OTTHUMG00000132163.2 5094 5094 1 ENSG00000198648.9 STK39 chr2 167954020 168248141 - protein_coding KNOWN OTTHUMG00000133745.7 294122 4247 30 ENSG00000238259.1 AC067940.1 chr2 168231921 168232220 - processed_pseudogene KNOWN OTTHUMG00000155146.1 300 300 1 ENSG00000241074.3 RN7SL813P chr2 168451324 168451606 + misc_RNA KNOWN NA 283 283 1 ENSG00000172292.13 CERS6 chr2 168455862 168775137 + protein_coding KNOWN OTTHUMG00000132183.4 319276 7241 21 ENSG00000265694.1 MIR4774 chr2 168582943 168583018 + miRNA KNOWN NA 76 76 1 ENSG00000199348.1 RNU6-766P chr2 168606390 168606496 - snRNA KNOWN NA 107 107 1 ENSG00000227617.7 CERS6-AS1 chr2 168771953 168786961 - processed_transcript KNOWN OTTHUMG00000153980.6 15009 4301 44 ENSG00000163072.13 NOSTRIN chr2 168786539 168865514 + protein_coding KNOWN OTTHUMG00000153990.19 78976 5248 149 ENSG00000152253.7 SPC25 chr2 168834132 168913371 - protein_coding KNOWN OTTHUMG00000132181.9 79240 1841 23 ENSG00000272478.1 RP1-317E23.7 chr1 25831913 25832134 - antisense NOVEL OTTHUMG00000185700.1 222 222 1 ENSG00000152254.9 G6PC2 chr2 168901240 168910000 + protein_coding KNOWN OTTHUMG00000132182.5 8761 3125 18 ENSG00000073734.8 ABCB11 chr2 168922938 169031322 - protein_coding KNOWN OTTHUMG00000154039.2 108385 5151 45 ENSG00000073737.15 DHRS9 chr2 169064789 169096167 + protein_coding KNOWN OTTHUMG00000132180.7 31379 3750 44 ENSG00000235321.1 AC007556.3 chr2 169100743 169101210 + antisense NOVEL OTTHUMG00000155318.1 468 307 2 ENSG00000235995.1 UBE2V1P6 chr2 169115195 169115680 + processed_pseudogene KNOWN OTTHUMG00000153958.2 486 422 2 ENSG00000081479.11 LRP2 chr2 169127109 169362685 - protein_coding KNOWN OTTHUMG00000132179.3 235577 16260 114 ENSG00000163093.10 BBS5 chr2 169479178 169506655 + protein_coding KNOWN OTTHUMG00000132207.2 27478 4556 37 ENSG00000251569.1 RP11-724O16.1 chr2 169479480 169525922 + protein_coding PUTATIVE OTTHUMG00000162280.1 46443 1935 16 ENSG00000239474.5 KLHL41 chr2 169509702 169526262 + protein_coding KNOWN OTTHUMG00000132205.2 16561 2620 14 ENSG00000138399.16 FASTKD1 chr2 169529749 169573875 - protein_coding KNOWN OTTHUMG00000154953.2 44127 4451 58 ENSG00000127423.9 AUNIP chr1 25831913 25859458 - protein_coding KNOWN OTTHUMG00000007372.2 27546 2408 9 ENSG00000229827.1 AC093899.3 chr2 169577371 169577746 - processed_pseudogene KNOWN OTTHUMG00000154952.1 376 376 1 ENSG00000138398.14 PPIG chr2 169584340 169641406 + protein_coding KNOWN OTTHUMG00000132206.4 57067 7368 103 ENSG00000154479.11 CCDC173 chr2 169645425 169694433 - protein_coding KNOWN OTTHUMG00000154116.2 49009 2236 16 ENSG00000226072.1 AC016772.4 chr2 169658132 169661357 - processed_pseudogene KNOWN OTTHUMG00000154118.1 3226 1261 3 ENSG00000144362.10 PHOSPHO2 chr2 169694454 169701708 + protein_coding KNOWN OTTHUMG00000153981.2 7255 1488 34 ENSG00000213160.8 KLHL23 chr2 169694488 169776989 + protein_coding KNOWN OTTHUMG00000132213.6 82502 5509 26 ENSG00000206961.1 SNORA51 chr2 169727872 169728003 + snoRNA NOVEL NA 132 132 1 ENSG00000231550.1 PTCHD3P2 chr2 169767185 169768799 - processed_pseudogene KNOWN OTTHUMG00000154119.1 1615 1205 2 ENSG00000214369.2 AC009967.3 chr2 169790093 169790885 + processed_pseudogene KNOWN OTTHUMG00000153985.1 793 793 1 ENSG00000138385.14 SSB chr2 169791933 169812064 + protein_coding KNOWN OTTHUMG00000132212.9 20132 5113 61 ENSG00000236528.1 RP1-125I3.2 chr1 25859613 25863420 + antisense NOVEL OTTHUMG00000007374.1 3808 849 2 ENSG00000138382.12 METTL5 chr2 169810081 169824931 - protein_coding KNOWN OTTHUMG00000154117.2 14851 2865 78 ENSG00000144357.15 UBR3 chr2 169827458 170084131 + protein_coding KNOWN OTTHUMG00000132229.3 256674 10063 165 ENSG00000227176.1 AC092641.2 chr2 170077224 170078294 - processed_pseudogene KNOWN OTTHUMG00000154115.2 1071 772 2 ENSG00000252807.1 RNU6-1006P chr2 170119996 170120098 - snRNA KNOWN NA 103 103 1 ENSG00000071909.17 MYO3B chr2 170178145 170655171 + protein_coding KNOWN OTTHUMG00000154002.7 477027 8236 234 ENSG00000231898.7 AC012594.1 chr2 170332085 170408564 - antisense NOVEL OTTHUMG00000154003.9 76480 5251 339 ENSG00000214821.4 HMGB1P4 chr2 170601662 170602228 - processed_pseudogene KNOWN OTTHUMG00000154005.1 567 567 1 ENSG00000213981.7 AC007277.3 chr2 170618628 170695374 - antisense NOVEL OTTHUMG00000154056.2 76747 2979 16 ENSG00000275414.1 uc_338 chr2 170690564 170690742 + misc_RNA NOVEL NA 179 179 1 ENSG00000222033.1 LINC01124 chr2 170712451 170714567 - lincRNA NOVEL OTTHUMG00000154054.1 2117 2117 1 ENSG00000182749.5 PAQR7 chr1 25861210 25871253 - protein_coding KNOWN OTTHUMG00000007373.1 10044 3297 2 ENSG00000204335.3 SP5 chr2 170715351 170718078 + protein_coding KNOWN OTTHUMG00000154053.1 2728 2060 4 ENSG00000234350.3 AC007405.4 chr2 170723086 170770768 - lincRNA NOVEL OTTHUMG00000154055.2 47683 3498 16 ENSG00000128692.8 EIF2S2P4 chr2 170751805 170752788 + processed_pseudogene KNOWN OTTHUMG00000154071.1 984 984 1 ENSG00000239467.4 AC007405.6 chr2 170771113 170778148 + lincRNA NOVEL OTTHUMG00000154075.1 7036 967 9 ENSG00000222509.1 Y_RNA chr2 170783167 170783271 + misc_RNA NOVEL NA 105 105 1 ENSG00000204334.7 ERICH2 chr2 170783786 170798971 + protein_coding KNOWN OTTHUMG00000154074.1 15186 601 5 ENSG00000128683.12 GAD1 chr2 170813213 170861151 + protein_coding KNOWN OTTHUMG00000044175.7 47939 8242 125 ENSG00000235934.1 AC007405.8 chr2 170816293 170818037 - antisense NOVEL OTTHUMG00000154073.1 1745 832 8 ENSG00000266020.1 AC010092.1 chr2 170916209 170916294 + miRNA NOVEL NA 86 86 1 ENSG00000115806.11 GORASP2 chr2 170928464 170967129 + protein_coding KNOWN OTTHUMG00000154072.2 38666 5340 61 ENSG00000207302.1 Y_RNA chr1 25877496 25877605 + misc_RNA NOVEL NA 110 110 1 ENSG00000198586.12 TLK1 chr2 170990823 171231314 - protein_coding KNOWN OTTHUMG00000132243.5 240492 9405 157 ENSG00000123600.17 METTL8 chr2 171317405 171434802 - protein_coding KNOWN OTTHUMG00000132261.5 117398 10074 97 ENSG00000224553.1 AC008065.1 chr2 171374931 171375278 - processed_pseudogene KNOWN OTTHUMG00000151624.1 348 348 1 ENSG00000115827.12 DCAF17 chr2 171434217 171485052 + protein_coding KNOWN OTTHUMG00000132259.2 50836 7657 84 ENSG00000228507.1 DAP3P2 chr2 171491422 171491931 + processed_pseudogene KNOWN OTTHUMG00000154084.1 510 510 1 ENSG00000234061.1 AC007969.4 chr2 171492905 171493095 + processed_pseudogene KNOWN OTTHUMG00000154085.1 191 191 1 ENSG00000233762.3 AC007969.5 chr2 171517270 171517716 - processed_pseudogene KNOWN OTTHUMG00000154086.1 447 447 1 ENSG00000071967.10 CYBRD1 chr2 171522247 171558133 + protein_coding KNOWN OTTHUMG00000132260.2 35887 5176 23 ENSG00000233934.2 RPL21P38 chr2 171587093 171587259 + processed_pseudogene KNOWN OTTHUMG00000154060.3 167 167 1 ENSG00000077380.14 DYNC1I2 chr2 171687409 171748420 + protein_coding KNOWN OTTHUMG00000154061.11 61012 4695 245 ENSG00000117632.19 STMN1 chr1 25884181 25906991 - protein_coding KNOWN OTTHUMG00000007389.2 22811 6261 37 ENSG00000228389.1 AC068039.4 chr2 171773482 171775844 + antisense NOVEL OTTHUMG00000154281.1 2363 2102 2 ENSG00000115840.12 SLC25A12 chr2 171784370 171999859 - protein_coding KNOWN OTTHUMG00000134290.3 215490 5169 75 ENSG00000252779.1 RNU6-182P chr2 171856566 171856670 - snRNA KNOWN NA 105 105 1 ENSG00000128708.11 HAT1 chr2 171922448 171983682 + protein_coding KNOWN OTTHUMG00000132282.5 61235 6790 47 ENSG00000172878.12 METAP1D chr2 171999583 172082430 + protein_coding KNOWN OTTHUMG00000132283.3 82848 4850 33 ENSG00000144355.13 DLX1 chr2 172084740 172089677 + protein_coding KNOWN OTTHUMG00000073951.3 4938 3656 18 ENSG00000115844.9 DLX2 chr2 172099439 172102900 - protein_coding KNOWN OTTHUMG00000132276.3 3462 2970 5 ENSG00000236651.1 DLX2-AS1 chr2 172103006 172109982 + lincRNA NOVEL OTTHUMG00000154065.2 6977 950 5 ENSG00000232555.1 AC104088.1 chr2 172315287 172323737 + lincRNA NOVEL OTTHUMG00000154230.1 8451 510 2 ENSG00000281212.1 Clostridiales-1 chr2 172411513 172411632 - sRNA NOVEL NA 120 120 1 ENSG00000229786.1 SNRPFP2 chr1 25887360 25887610 + processed_pseudogene KNOWN OTTHUMG00000156992.1 251 251 1 ENSG00000278924.1 RP11-227L6.1 chr2 172423807 172424173 - TEC KNOWN OTTHUMG00000176256.1 367 367 1 ENSG00000091409.13 ITGA6 chr2 172427354 172506282 + protein_coding KNOWN OTTHUMG00000132277.4 78929 6533 155 ENSG00000226963.1 AC078883.4 chr2 172427774 172428603 - antisense NOVEL OTTHUMG00000154231.1 830 558 2 ENSG00000232788.1 AC078883.3 chr2 172464262 172466022 - antisense NOVEL OTTHUMG00000154089.1 1761 1077 4 ENSG00000225205.4 AC093818.1 chr2 172480840 172556596 - antisense NOVEL OTTHUMG00000154088.3 75757 2447 14 ENSG00000152256.12 PDK1 chr2 172555373 172608669 + protein_coding KNOWN OTTHUMG00000132285.6 53297 14883 67 ENSG00000199866.1 Y_RNA chr2 172558151 172558252 - misc_RNA NOVEL NA 102 102 1 ENSG00000230104.1 AC018712.2 chr2 172674212 172674898 - processed_pseudogene KNOWN OTTHUMG00000154093.1 687 687 1 ENSG00000228016.1 RAPGEF4-AS1 chr2 172677141 172736206 - antisense NOVEL OTTHUMG00000154091.1 59066 5217 9 ENSG00000239041.1 snoU13 chr2 172691299 172691402 + snoRNA NOVEL NA 104 104 1 ENSG00000223624.1 RP1-125I3.4 chr1 25888970 25889109 + processed_pseudogene KNOWN OTTHUMG00000007388.2 140 140 1 ENSG00000091428.16 RAPGEF4 chr2 172735274 173052893 + protein_coding KNOWN OTTHUMG00000133677.4 317620 7129 212 ENSG00000232292.1 ALDH7A1P2 chr2 172893763 172894383 - processed_pseudogene KNOWN OTTHUMG00000154092.1 621 621 1 ENSG00000265709.1 AC019046.1 chr2 173061732 173061812 + miRNA NOVEL NA 81 81 1 ENSG00000091436.15 pk chr2 173075435 173268010 + protein_coding KNOWN OTTHUMG00000132297.7 192576 13799 91 ENSG00000238133.5 MLK7-AS1 chr2 173166446 173282036 - antisense NOVEL OTTHUMG00000154109.2 115591 3049 15 ENSG00000231735.1 RP11-1O7.1 chr2 173297629 173298512 + processed_pseudogene KNOWN OTTHUMG00000157078.1 884 884 1 ENSG00000236391.3 AC092573.2 chr2 173338219 173356208 - transcribed_processed_pseudogene KNOWN OTTHUMG00000154106.2 17990 457 3 ENSG00000144354.12 CDCA7 chr2 173354820 173368997 + protein_coding KNOWN OTTHUMG00000132296.2 14178 3934 64 ENSG00000213148.3 AC073465.1 chr2 173431349 173431812 - processed_pseudogene KNOWN OTTHUMG00000154105.1 464 464 1 ENSG00000236832.1 AC073465.2 chr2 173477996 173478400 - processed_pseudogene KNOWN OTTHUMG00000154107.1 405 405 1 ENSG00000264021.1 MIR3917 chr1 25906362 25906454 - miRNA KNOWN NA 93 93 1 ENSG00000226131.1 AC073465.3 chr2 173485865 173486362 - processed_pseudogene KNOWN OTTHUMG00000154128.1 498 498 1 ENSG00000237016.1 AC013410.1 chr2 173575110 173576341 - processed_pseudogene KNOWN OTTHUMG00000154130.1 1232 1232 1 ENSG00000237617.1 AC013410.2 chr2 173705948 173706148 - processed_pseudogene KNOWN OTTHUMG00000154131.1 201 201 1 ENSG00000270460.1 RP11-796E10.1 chr2 173811076 173811392 + lincRNA NOVEL OTTHUMG00000185116.1 317 317 1 ENSG00000234415.1 RPL5P7 chr2 173871653 173872465 - processed_pseudogene KNOWN OTTHUMG00000154133.1 813 813 1 ENSG00000224638.1 AC106900.6 chr2 173880865 173899428 - lincRNA NOVEL OTTHUMG00000154132.1 18564 456 4 ENSG00000172845.12 SP3 chr2 173906459 173965702 - protein_coding KNOWN OTTHUMG00000132333.3 59244 10704 27 ENSG00000271151.1 RP11-394I13.2 chr2 173968351 173969418 + lincRNA NOVEL OTTHUMG00000185087.1 1068 1068 1 ENSG00000273258.1 RP11-394I13.3 chr2 174011856 174012975 - lincRNA NOVEL OTTHUMG00000186065.1 1120 358 2 ENSG00000260868.1 RP11-394I13.1 chr2 174025280 174027163 + lincRNA NOVEL OTTHUMG00000176260.1 1884 1884 1 ENSG00000273443.1 RP11-54O7.18 chr1 1062208 1063288 - lincRNA NOVEL OTTHUMG00000186253.1 1081 829 2 ENSG00000266763.1 AL033528.1 chr1 25911749 25911822 + miRNA NOVEL NA 74 74 1 ENSG00000235414.3 AC016737.1 chr2 174043008 174043880 + processed_pseudogene KNOWN OTTHUMG00000154134.1 873 873 1 ENSG00000138430.14 OLA1 chr2 174072447 174248698 - protein_coding KNOWN OTTHUMG00000132335.3 176252 6100 62 ENSG00000270799.1 RP11-451F14.1 chr2 174171891 174172725 + processed_pseudogene KNOWN OTTHUMG00000184260.1 835 835 1 ENSG00000243770.3 RN7SL65P chr2 174240143 174240457 - misc_RNA KNOWN NA 315 315 1 ENSG00000201088.1 Y_RNA chr2 174264878 174264981 - misc_RNA NOVEL NA 104 104 1 ENSG00000227180.1 AC013467.1 chr2 174299324 174300956 - processed_pseudogene KNOWN OTTHUMG00000154147.1 1633 1041 2 ENSG00000237804.1 HNRNPA1P39 chr2 174310015 174310974 - processed_pseudogene KNOWN OTTHUMG00000154151.1 960 960 1 ENSG00000231453.1 LINC01305 chr2 174326027 174330643 + lincRNA NOVEL OTTHUMG00000154148.1 4617 3435 5 ENSG00000280414.1 RP11-572N21.1 chr2 174334438 174337566 - TEC KNOWN OTTHUMG00000187125.1 3129 3129 1 ENSG00000217236.1 SP9 chr2 174334946 174338492 + protein_coding KNOWN OTTHUMG00000150371.1 3547 2554 2 ENSG00000158006.12 PAFAH2 chr1 25959767 25998157 - protein_coding KNOWN OTTHUMG00000007437.2 38391 3835 46 ENSG00000138433.14 CIR1 chr2 174348022 174395715 - protein_coding KNOWN OTTHUMG00000132338.3 47694 3181 26 ENSG00000144306.12 SCRN3 chr2 174395730 174429575 + protein_coding KNOWN OTTHUMG00000132332.9 33846 4144 77 ENSG00000163328.12 GPR155 chr2 174431571 174487094 - protein_coding KNOWN OTTHUMG00000132336.2 55524 7769 73 ENSG00000226853.2 AC010894.3 chr2 174487389 174488386 + lincRNA NOVEL OTTHUMG00000154152.2 998 791 6 ENSG00000179997.8 AC010894.4 chr2 174501952 174502312 + processed_pseudogene KNOWN OTTHUMG00000154153.1 361 361 1 ENSG00000279884.1 RP11-483E17.1 chr2 174545385 174546335 - TEC KNOWN OTTHUMG00000176283.1 951 951 1 ENSG00000236449.1 AC018890.6 chr2 174547141 174774827 + antisense NOVEL OTTHUMG00000154592.2 227687 3701 7 ENSG00000206965.1 RNU6-5P chr2 174557966 174558072 - snRNA KNOWN NA 107 107 1 ENSG00000115935.15 WIPF1 chr2 174559572 174682916 - protein_coding KNOWN OTTHUMG00000132334.4 123345 9121 96 ENSG00000237798.1 AC010894.5 chr2 174575227 174587726 + antisense NOVEL OTTHUMG00000154149.1 12500 457 2 ENSG00000207237.1 RNU6-110P chr1 25964197 25964300 + snRNA KNOWN NA 104 104 1 ENSG00000235655.3 H3F3AP4 chr2 174719908 174720318 + processed_pseudogene KNOWN OTTHUMG00000154155.1 411 411 1 ENSG00000138435.13 CHRNA1 chr2 174747592 174764472 - protein_coding KNOWN OTTHUMG00000132357.2 16881 2807 49 ENSG00000237104.1 AC018890.4 chr2 174783046 174787928 - lincRNA NOVEL OTTHUMG00000154154.1 4883 1879 2 ENSG00000128656.12 CHN1 chr2 174799363 175005369 - protein_coding KNOWN OTTHUMG00000154225.5 206007 4971 114 ENSG00000281373.1 Y_RNA chr2 174977803 174977897 + misc_RNA NOVEL NA 95 95 1 ENSG00000212167.1 RNU6-763P chr2 175022214 175022319 + snRNA KNOWN NA 106 106 1 ENSG00000199827.1 RNU6-1290P chr2 175029769 175029877 + snRNA KNOWN NA 109 109 1 ENSG00000227187.1 RP11-6C10.1 chr2 175033778 175034192 - processed_pseudogene KNOWN OTTHUMG00000157079.1 415 415 1 ENSG00000266510.1 AC007435.1 chr2 175034517 175034590 - miRNA NOVEL NA 74 74 1 ENSG00000115966.15 ATF2 chr2 175072250 175168382 - protein_coding KNOWN OTTHUMG00000132424.7 96133 5751 237 ENSG00000252190.1 SCARNA17 chr1 26006006 26006130 + scaRNA NOVEL NA 125 125 1 ENSG00000277948.1 uc_338 chr2 175092401 175092587 - misc_RNA NOVEL NA 187 187 1 ENSG00000215973.1 MIR933 chr2 175167633 175167709 - miRNA KNOWN NA 77 77 1 ENSG00000229750.1 AC096649.2 chr2 175167904 175168522 + antisense NOVEL OTTHUMG00000154227.1 619 497 2 ENSG00000154518.8 ATP5G3 chr2 175176258 175184607 - protein_coding KNOWN OTTHUMG00000132425.2 8350 6780 21 ENSG00000200121.2 Y_RNA chr2 175176493 175176586 - misc_RNA NOVEL NA 94 94 1 ENSG00000233131.1 AC096649.1 chr2 175184215 175184607 + processed_pseudogene KNOWN OTTHUMG00000154226.1 393 393 1 ENSG00000229066.1 AC096649.3 chr2 175257250 175454640 + lincRNA NOVEL OTTHUMG00000154232.1 197391 1002 5 ENSG00000221347.1 AC096649.4 chr2 175330373 175330472 + miRNA NOVEL NA 100 100 1 ENSG00000223976.1 EXTL2P1 chr2 175842887 175843302 + processed_pseudogene KNOWN OTTHUMG00000154110.1 416 416 1 ENSG00000235047.1 AC016751.3 chr2 175897336 175904232 + antisense NOVEL OTTHUMG00000154113.1 6897 280 2 ENSG00000252691.1 SCARNA18 chr1 26006216 26006299 + scaRNA NOVEL NA 84 84 1 ENSG00000229779.1 AC016751.2 chr2 175904371 175905502 - lincRNA NOVEL OTTHUMG00000154111.1 1132 306 2 ENSG00000144320.12 KIAA1715 chr2 175923892 176002839 - protein_coding KNOWN OTTHUMG00000154112.5 78948 9122 70 ENSG00000174279.4 EVX2 chr2 176077472 176083913 - protein_coding KNOWN OTTHUMG00000154173.2 6442 4203 3 ENSG00000128714.5 HOXD13 chr2 176092891 176095938 + protein_coding KNOWN OTTHUMG00000132431.5 3048 2240 2 ENSG00000170178.6 HOXD12 chr2 176099730 176101193 + protein_coding KNOWN OTTHUMG00000150358.4 1464 1346 4 ENSG00000128713.12 HOXD11 chr2 176104216 176109754 + protein_coding KNOWN OTTHUMG00000132510.5 5539 2110 8 ENSG00000128710.5 HOXD10 chr2 176108790 176119942 + protein_coding KNOWN OTTHUMG00000132511.4 11153 2692 7 ENSG00000237380.5 HOXD-AS2 chr2 176121611 176137098 - antisense KNOWN OTTHUMG00000154174.3 15488 1429 7 ENSG00000128709.11 HOXD9 chr2 176122720 176124937 + protein_coding KNOWN OTTHUMG00000132516.5 2218 1870 6 ENSG00000281719.1 AC009336.1 chr2 176125773 176125910 - miRNA NOVEL NA 138 138 1 ENSG00000158008.8 EXTL1 chr1 26019884 26036464 + protein_coding KNOWN OTTHUMG00000007509.1 16581 4537 24 ENSG00000175879.8 HOXD8 chr2 176129694 176132695 + protein_coding KNOWN OTTHUMG00000132513.5 3002 2629 11 ENSG00000128652.10 HOXD3 chr2 176136612 176173102 + protein_coding KNOWN OTTHUMG00000187566.1 36491 3548 10 ENSG00000207744.1 MIR10B chr2 176150303 176150412 + miRNA KNOWN NA 110 110 1 ENSG00000278500.1 AC009336.19 chr2 176151085 176173097 + protein_coding KNOWN OTTHUMG00000132517.9 22013 3521 4 ENSG00000170166.5 HOXD4 chr2 176151222 176153226 + protein_coding KNOWN OTTHUMG00000132515.4 2005 1464 2 ENSG00000272729.1 RP11-387A1.5 chr2 176164164 176165716 - antisense NOVEL OTTHUMG00000186066.1 1553 1553 1 ENSG00000224189.5 HAGLR chr2 176173195 176188958 - antisense NOVEL OTTHUMG00000154172.2 15764 4851 41 ENSG00000226363.3 HAGLROS chr2 176177717 176179008 + lincRNA NOVEL OTTHUMG00000154176.3 1292 1121 2 ENSG00000128645.12 HOXD1 chr2 176188579 176190907 + protein_coding KNOWN OTTHUMG00000132512.5 2329 1975 2 ENSG00000277284.1 MIR7704 chr2 176188843 176188901 + miRNA KNOWN NA 59 59 1 ENSG00000158014.13 SLC30A2 chr1 26037252 26046133 - protein_coding KNOWN OTTHUMG00000007508.3 8882 3498 18 ENSG00000279160.1 RP11-387A1.6 chr2 176189919 176192538 - TEC KNOWN OTTHUMG00000187567.1 2620 2620 1 ENSG00000218175.2 AC016739.2 chr2 176200908 176201252 - processed_pseudogene KNOWN OTTHUMG00000155366.1 345 345 1 ENSG00000230384.1 AC016739.1 chr2 176242111 176242993 + processed_pseudogene KNOWN OTTHUMG00000154406.1 883 883 1 ENSG00000128654.12 MTX2 chr2 176269395 176338025 + protein_coding KNOWN OTTHUMG00000132514.7 68631 1717 45 ENSG00000264392.2 AC016739.3 chr2 176270241 176270330 - miRNA NOVEL NA 90 90 1 ENSG00000237260.1 AC073069.2 chr2 176338637 176339077 + processed_pseudogene KNOWN OTTHUMG00000154405.2 441 441 1 ENSG00000265186.1 AC068706.2 chr2 176382232 176382332 - miRNA NOVEL NA 101 101 1 ENSG00000221304.1 AC068706.1 chr2 176383427 176383576 - miRNA NOVEL NA 150 150 1 ENSG00000229434.1 AC017048.1 chr2 176506245 176507702 - lincRNA NOVEL OTTHUMG00000154142.1 1458 495 2 ENSG00000236231.1 AC017048.2 chr2 176524879 176531683 - lincRNA NOVEL OTTHUMG00000154158.1 6805 822 4 ENSG00000158022.6 TRIM63 chr1 26051304 26068436 - protein_coding KNOWN OTTHUMG00000007510.1 17133 2573 12 ENSG00000272551.1 RP11-324L17.1 chr2 176611437 176612249 - lincRNA NOVEL OTTHUMG00000186067.1 813 813 1 ENSG00000163364.8 LINC01116 chr2 176629589 176637931 - lincRNA NOVEL OTTHUMG00000154156.3 8343 1783 7 ENSG00000224577.1 LINC01117 chr2 176637710 176655958 + lincRNA NOVEL OTTHUMG00000154157.1 18249 699 4 ENSG00000252027.1 RNU6ATAC14P chr2 176664676 176664766 + snRNA KNOWN NA 91 91 1 ENSG00000230552.4 AC092162.1 chr2 176724268 176819310 - lincRNA NOVEL OTTHUMG00000154103.2 95043 5290 18 ENSG00000237053.1 FUCA1P1 chr2 176804987 176806337 - processed_pseudogene KNOWN OTTHUMG00000154420.2 1351 1351 1 ENSG00000223777.1 AC092162.2 chr2 176809426 176809859 - processed_pseudogene KNOWN OTTHUMG00000154421.2 434 434 1 ENSG00000279205.1 RP11-632P5.1 chr2 176822030 176823653 + TEC KNOWN OTTHUMG00000176289.1 1624 1624 1 ENSG00000227098.1 AC073636.1 chr2 176845993 176849428 - lincRNA NOVEL OTTHUMG00000154100.2 3436 646 5 ENSG00000206866.1 RNU6-187P chr2 176929985 176930090 - snRNA KNOWN NA 106 106 1 ENSG00000265320.1 AL391650.1 chr1 26071578 26071677 + miRNA NOVEL NA 100 100 1 ENSG00000236501.4 AC079305.11 chr2 176990508 177164516 - lincRNA NOVEL OTTHUMG00000155365.1 174009 946 9 ENSG00000251746.1 RNA5SP112 chr2 177138699 177138797 + rRNA KNOWN NA 99 99 1 ENSG00000229337.1 AC079305.8 chr2 177155622 177212662 - antisense NOVEL OTTHUMG00000154102.1 57041 218 2 ENSG00000226273.2 AC079305.5 chr2 177177695 177178255 + processed_pseudogene KNOWN OTTHUMG00000154098.2 561 561 1 ENSG00000201102.1 Y_RNA chr2 177194983 177195095 + misc_RNA NOVEL NA 113 113 1 ENSG00000213069.3 KRT8P40 chr2 177197985 177198547 + processed_pseudogene KNOWN OTTHUMG00000154099.3 563 563 1 ENSG00000170144.17 HNRNPA3 chr2 177212563 177223958 + protein_coding KNOWN OTTHUMG00000132529.11 11396 6033 40 ENSG00000263721.1 MIR4444-1 chr2 177212726 177212799 + miRNA KNOWN NA 74 74 1 ENSG00000116044.14 NFE2L2 chr2 177227595 177392697 - protein_coding KNOWN OTTHUMG00000133620.12 165103 5979 60 ENSG00000225808.1 DNAJC19P5 chr2 177229191 177229506 - processed_pseudogene KNOWN OTTHUMG00000154139.1 316 316 1 ENSG00000175087.8 PDIK1L chr1 26111165 26125543 + protein_coding KNOWN OTTHUMG00000007511.1 14379 4535 13 ENSG00000265396.1 MIR3128 chr2 177255945 177256010 - miRNA KNOWN NA 66 66 1 ENSG00000222043.2 AC079305.10 chr2 177264359 177265515 + antisense NOVEL OTTHUMG00000154178.1 1157 499 2 ENSG00000213963.5 AC074286.1 chr2 177283508 177392691 - sense_overlapping NOVEL OTTHUMG00000132531.9 109184 7171 38 ENSG00000271825.1 RP11-337N6.2 chr2 177300600 177302006 + antisense NOVEL OTTHUMG00000185612.1 1407 444 2 ENSG00000271996.1 RP11-337N6.1 chr2 177306373 177310572 + antisense NOVEL OTTHUMG00000185613.1 4200 564 2 ENSG00000278418.1 MIR6512 chr2 177313806 177313882 - miRNA KNOWN NA 77 77 1 ENSG00000280374.1 RP11-337N6.3 chr2 177317715 177318471 - sense_intronic NOVEL OTTHUMG00000189260.1 757 757 1 ENSG00000237178.2 AC019080.1 chr2 177344443 177344836 + processed_pseudogene KNOWN OTTHUMG00000154138.2 394 394 1 ENSG00000238295.1 snoU13 chr2 177345858 177345961 - snoRNA NOVEL NA 104 104 1 ENSG00000018510.11 AGPS chr2 177392644 177543836 + protein_coding KNOWN OTTHUMG00000132530.2 151193 8197 27 ENSG00000237330.2 RNF223 chr1 1070966 1074307 - protein_coding KNOWN OTTHUMG00000185582.1 3342 1902 2 ENSG00000197245.4 FAM110D chr1 26159020 26162628 + protein_coding KNOWN OTTHUMG00000007537.1 3609 1524 2 ENSG00000196659.9 TTC30B chr2 177548998 177553014 - protein_coding KNOWN OTTHUMG00000154166.2 4017 4017 1 ENSG00000237655.1 AC073834.3 chr2 177603089 177618572 + antisense NOVEL OTTHUMG00000154167.1 15484 590 3 ENSG00000197557.6 TTC30A chr2 177612992 177618966 - protein_coding KNOWN OTTHUMG00000132528.2 5975 5975 1 ENSG00000128655.15 PDE11A chr2 177623252 178108339 - protein_coding KNOWN OTTHUMG00000154188.7 485088 12498 137 ENSG00000229941.4 AC012499.1 chr2 177698429 177723289 + antisense NOVEL OTTHUMG00000154189.2 24861 741 7 ENSG00000236664.1 AC011998.1 chr2 177953111 178011989 - sense_intronic NOVEL OTTHUMG00000154195.1 58879 254 2 ENSG00000213962.2 API5P2 chr2 177997273 177998770 - processed_pseudogene KNOWN OTTHUMG00000154194.1 1498 1498 1 ENSG00000229744.1 AC011998.2 chr2 178017993 178018465 + processed_pseudogene KNOWN OTTHUMG00000154196.1 473 473 1 ENSG00000206788.1 RNU6-629P chr2 178038902 178039004 + snRNA KNOWN NA 103 103 1 ENSG00000249909.1 CYCTP chr2 178092503 178104470 - unitary_pseudogene KNOWN OTTHUMG00000154943.1 11968 315 3 ENSG00000142684.7 ZNF593 chr1 26169871 26172060 + protein_coding KNOWN OTTHUMG00000007538.2 2190 1956 5 ENSG00000227241.1 AC011998.4 chr2 178105637 178105753 + processed_pseudogene KNOWN OTTHUMG00000154193.1 117 117 1 ENSG00000155636.13 RBM45 chr2 178112424 178139011 + protein_coding KNOWN OTTHUMG00000154202.3 26588 4784 43 ENSG00000223096.1 RNU5E-9P chr2 178142548 178142651 + snRNA KNOWN NA 104 104 1 ENSG00000079156.15 OSBPL6 chr2 178194481 178402891 + protein_coding KNOWN OTTHUMG00000132579.4 208411 11486 168 ENSG00000223960.5 AC009948.5 chr2 178413939 178440243 + antisense NOVEL OTTHUMG00000154423.2 26305 4001 25 ENSG00000180228.11 PRKRA chr2 178431414 178451512 - protein_coding KNOWN OTTHUMG00000132576.25 20099 3941 62 ENSG00000204311.10 DFNB59 chr2 178451436 178461390 + protein_coding KNOWN OTTHUMG00000154425.2 9955 2457 30 ENSG00000238082.1 AC009948.7 chr2 178454716 178455428 + processed_pseudogene KNOWN OTTHUMG00000154424.1 713 713 1 ENSG00000079150.16 FKBP7 chr2 178463664 178478600 - protein_coding KNOWN OTTHUMG00000132577.5 14937 3080 30 ENSG00000116095.9 PLEKHA3 chr2 178480468 178516462 + protein_coding KNOWN OTTHUMG00000154446.2 35995 14193 23 ENSG00000236782.4 RP11-96L14.7 chr1 26169947 26171821 - antisense NOVEL OTTHUMG00000007539.1 1875 1290 14 ENSG00000237298.7 TTN-AS1 chr2 178521183 178779963 + antisense NOVEL OTTHUMG00000133536.10 258781 20654 317 ENSG00000155657.22 TTN chr2 178525989 178830802 - protein_coding KNOWN OTTHUMG00000154448.20 304814 118327 2009 ENSG00000270956.1 RP11-65L3.4 chr2 178541125 178541799 + antisense NOVEL OTTHUMG00000185185.1 675 675 1 ENSG00000270277.1 RP11-65L3.2 chr2 178548884 178550681 + antisense NOVEL OTTHUMG00000180305.1 1798 1798 1 ENSG00000279598.1 RP11-65L3.3 chr2 178554561 178558966 + TEC KNOWN OTTHUMG00000180306.1 4406 4406 1 ENSG00000271011.1 RP11-171I2.5 chr2 178577103 178577622 + antisense NOVEL OTTHUMG00000185186.1 520 520 1 ENSG00000270574.1 RP11-171I2.2 chr2 178578790 178580906 + antisense NOVEL OTTHUMG00000180307.1 2117 2117 1 ENSG00000271141.1 RP11-171I2.4 chr2 178616581 178617123 + lincRNA NOVEL OTTHUMG00000185187.1 543 543 1 ENSG00000271401.1 RP11-171I2.3 chr2 178644717 178645179 + lincRNA NOVEL OTTHUMG00000185188.1 463 463 1 ENSG00000267784.1 RP11-171I2.1 chr2 178723457 178727046 + antisense NOVEL OTTHUMG00000180308.1 3590 3590 1 ENSG00000142675.16 CNKSR1 chr1 26177403 26189886 + protein_coding KNOWN OTTHUMG00000007541.4 12484 4043 153 ENSG00000163492.12 CCDC141 chr2 178829757 179050086 - protein_coding KNOWN OTTHUMG00000132578.8 220330 15446 87 ENSG00000238542.1 RNU7-104P chr2 178831371 178831449 - snRNA KNOWN NA 79 79 1 ENSG00000231541.1 RPS6P2 chr2 179001756 179002760 + processed_pseudogene KNOWN OTTHUMG00000154556.2 1005 705 2 ENSG00000252000.1 ACA59 chr2 179023257 179023378 - snoRNA NOVEL NA 122 122 1 ENSG00000187231.12 SESTD1 chr2 179101692 179264790 - protein_coding KNOWN OTTHUMG00000154554.4 163099 11349 66 ENSG00000237477.1 AC093911.1 chr2 179273831 179285707 + lincRNA NOVEL OTTHUMG00000154555.1 11877 552 2 ENSG00000237964.3 AC068042.1 chr2 179399728 179400875 - processed_pseudogene KNOWN OTTHUMG00000154558.1 1148 1148 1 ENSG00000144331.17 ZNF385B chr2 179441982 179861505 - protein_coding KNOWN OTTHUMG00000154559.7 419524 5310 80 ENSG00000213126.2 AC092642.1 chr2 179814251 179814675 + processed_pseudogene KNOWN OTTHUMG00000154563.1 425 425 1 ENSG00000221240.1 MIR1258 chr2 179860836 179860908 - miRNA KNOWN NA 73 73 1 ENSG00000188782.6 CATSPER4 chr1 26190561 26202968 + protein_coding KNOWN OTTHUMG00000003383.3 12408 2030 40 ENSG00000280636.1 SNORA43 chr2 179934401 179934538 - snoRNA NOVEL NA 138 138 1 ENSG00000202216.2 SNORA17 chr2 179934402 179934527 - snoRNA NOVEL NA 126 126 1 ENSG00000163510.12 CWC22 chr2 179944876 180007113 - protein_coding KNOWN OTTHUMG00000154244.1 62238 3324 40 ENSG00000281155.1 AC096587.1 chr2 179993129 179993201 + miRNA NOVEL NA 73 73 1 ENSG00000270289.1 RP11-512G4.1 chr2 180473137 180473419 - processed_pseudogene KNOWN OTTHUMG00000184350.1 283 283 1 ENSG00000225258.1 AC009478.1 chr2 180571712 180692454 - lincRNA NOVEL OTTHUMG00000154248.1 120743 562 4 ENSG00000264976.1 AC009478.2 chr2 180617118 180617206 - miRNA NOVEL NA 89 89 1 ENSG00000281131.1 SCHLAP1 chr2 180692104 180916939 + lincRNA KNOWN OTTHUMG00000189571.1 224836 1436 5 ENSG00000279559.1 RP11-739A13.1 chr2 180801227 180801533 + TEC KNOWN OTTHUMG00000176261.1 307 307 1 ENSG00000226564.1 FTH1P20 chr2 180872867 180873414 - processed_pseudogene KNOWN OTTHUMG00000154191.1 548 548 1 ENSG00000236155.5 RP11-231P20.2 chr1 26209741 26229840 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000003384.3 20100 3191 19 ENSG00000236667.1 AC104076.2 chr2 180938830 180939298 - processed_pseudogene KNOWN OTTHUMG00000154190.1 469 469 1 ENSG00000170035.14 UBE2E3 chr2 180967248 181076585 + protein_coding KNOWN OTTHUMG00000132585.12 109338 2973 69 ENSG00000236153.1 AC104076.3 chr2 180979427 180980090 - antisense NOVEL OTTHUMG00000154204.1 664 265 2 ENSG00000238171.1 AC068196.1 chr2 181076051 181105968 - lincRNA NOVEL OTTHUMG00000154203.1 29918 833 6 ENSG00000234663.4 AC104820.2 chr2 181101932 181399559 + lincRNA NOVEL OTTHUMG00000154205.2 297628 2964 24 ENSG00000266705.1 MIR4437 chr2 181305593 181305652 - miRNA KNOWN NA 60 60 1 ENSG00000226681.1 AC020595.1 chr2 181422154 181425749 - lincRNA NOVEL OTTHUMG00000154211.1 3596 533 2 ENSG00000115232.12 ITGA4 chr2 181457202 181536187 + protein_coding KNOWN OTTHUMG00000154212.2 78986 7901 84 ENSG00000188452.12 CERKL chr2 181536676 181680665 - protein_coding KNOWN OTTHUMG00000154315.1 143990 4765 131 ENSG00000162992.3 NEUROD1 chr2 181673088 181680876 - protein_coding KNOWN OTTHUMG00000132583.2 7789 3312 4 ENSG00000278572.1 RP11-231P20.6 chr1 26218581 26220476 - unprocessed_pseudogene KNOWN OTTHUMG00000187522.1 1896 899 3 ENSG00000234595.1 AC013733.3 chr2 181683113 181685707 + antisense NOVEL OTTHUMG00000154314.1 2595 635 2 ENSG00000225570.1 AC013733.4 chr2 181690380 181693415 - lincRNA NOVEL OTTHUMG00000154316.1 3036 985 2 ENSG00000223873.1 AC013733.5 chr2 181694442 181694900 + processed_pseudogene KNOWN OTTHUMG00000154313.1 459 459 1 ENSG00000221023.1 RNU6ATAC19P chr2 181738606 181738715 + snRNA KNOWN NA 110 110 1 ENSG00000260742.1 RP11-366L5.1 chr2 181887851 181891663 - antisense NOVEL OTTHUMG00000176262.1 3813 3813 1 ENSG00000138434.15 SSFA2 chr2 181891833 181930738 + protein_coding KNOWN OTTHUMG00000132584.4 38906 9582 151 ENSG00000150722.9 PPP1R1C chr2 181954241 182131398 + protein_coding KNOWN OTTHUMG00000154326.4 177158 4887 61 ENSG00000213958.2 KRT18P29 chr2 181961212 181962478 - processed_pseudogene KNOWN OTTHUMG00000154327.1 1267 1267 1 ENSG00000222418.1 RNA5SP113 chr2 182048822 182048905 + rRNA KNOWN NA 84 84 1 ENSG00000265129.1 AC064837.1 chr2 182088429 182088616 - miRNA NOVEL NA 188 188 1 ENSG00000130695.12 CEP85 chr1 26234153 26279038 + protein_coding KNOWN OTTHUMG00000003380.5 44886 5422 66 ENSG00000115252.17 PDE1A chr2 182140036 182523192 - protein_coding KNOWN OTTHUMG00000132596.2 383157 6322 93 ENSG00000242121.3 RN7SL267P chr2 182314284 182314544 + misc_RNA KNOWN NA 261 261 1 ENSG00000281257.1 AC012500.1 chr2 182314454 182314536 + miRNA NOVEL NA 83 83 1 ENSG00000216011.2 AC010888.1 chr2 182460808 182460895 + miRNA NOVEL NA 88 88 1 ENSG00000077232.15 DNAJC10 chr2 182716041 182794464 + protein_coding KNOWN OTTHUMG00000154209.4 78424 21826 131 ENSG00000232430.1 RPL31P15 chr2 182788098 182788435 + processed_pseudogene KNOWN OTTHUMG00000154210.2 338 338 1 ENSG00000212404.1 Y_RNA chr2 182828124 182828221 + misc_RNA NOVEL NA 98 98 1 ENSG00000162998.4 FRZB chr2 182833275 182867162 - protein_coding KNOWN OTTHUMG00000132597.1 33888 3162 6 ENSG00000207178.1 RNU6-1122P chr2 182873841 182873947 + snRNA KNOWN NA 107 107 1 ENSG00000061676.13 NCKAP1 chr2 182909115 183038858 - protein_coding KNOWN OTTHUMG00000132623.4 129744 22520 83 ENSG00000270733.1 RP11-231P20.5 chr1 26263041 26263398 - processed_pseudogene KNOWN OTTHUMG00000184274.1 358 358 1 ENSG00000202141.1 Y_RNA chr2 183022859 183022971 - misc_RNA NOVEL NA 113 113 1 ENSG00000221498.1 SNORA77 chr2 183064235 183064346 - snoRNA NOVEL NA 112 112 1 ENSG00000231203.1 KRT8P10 chr2 183071040 183072486 - processed_pseudogene KNOWN OTTHUMG00000154237.2 1447 1447 1 ENSG00000162999.11 DUSP19 chr2 183078559 183100005 + protein_coding KNOWN OTTHUMG00000132622.2 21447 5376 11 ENSG00000224643.4 AC064871.3 chr2 183083405 183108519 - antisense NOVEL OTTHUMG00000154238.1 25115 597 5 ENSG00000163002.11 NUP35 chr2 183117513 183161680 + protein_coding KNOWN OTTHUMG00000132621.6 44168 4046 58 ENSG00000272800.1 RP11-438L19.1 chr2 183214319 183215400 + lincRNA NOVEL OTTHUMG00000186271.1 1082 1082 1 ENSG00000213120.3 LIN28AP1 chr2 183260642 183261046 + processed_pseudogene KNOWN OTTHUMG00000154267.1 405 405 1 ENSG00000177855.8 CACYBPP2 chr2 183607442 183608119 - processed_pseudogene KNOWN OTTHUMG00000153760.1 678 678 1 ENSG00000234172.1 AC093639.1 chr2 183904529 183949112 + lincRNA NOVEL OTTHUMG00000153762.1 44584 473 3 ENSG00000142669.12 SH3BGRL3 chr1 26279176 26281522 + protein_coding KNOWN OTTHUMG00000003381.2 2347 1786 9 ENSG00000266808.1 MIR548AE1 chr2 184378975 184379044 + miRNA KNOWN NA 70 70 1 ENSG00000170396.7 ZNF804A chr2 184598366 184939492 + protein_coding KNOWN OTTHUMG00000132625.1 341127 4694 7 ENSG00000237824.2 AC010747.2 chr2 184902111 184902562 - processed_pseudogene KNOWN OTTHUMG00000153924.2 452 452 1 ENSG00000225406.1 AC080125.1 chr2 185547135 185547818 - processed_pseudogene KNOWN OTTHUMG00000153809.1 684 684 1 ENSG00000212581.1 U8 chr2 185661774 185661906 + snoRNA NOVEL NA 133 133 1 ENSG00000226747.5 AC007966.1 chr2 185719874 185740479 - antisense NOVEL OTTHUMG00000154207.2 20606 1472 10 ENSG00000188738.12 FSIP2 chr2 185738628 185833290 + protein_coding KNOWN OTTHUMG00000153874.6 94663 23761 74 ENSG00000231646.4 FSIP2-AS1 chr2 185783691 185800151 - antisense NOVEL OTTHUMG00000155450.1 16461 880 6 ENSG00000224019.1 RPL21P32 chr2 185956587 185957063 - processed_pseudogene KNOWN OTTHUMG00000154236.2 477 477 1 ENSG00000237877.5 LINC01473 chr2 186032891 186083233 - lincRNA NOVEL OTTHUMG00000154250.4 50343 1450 13 ENSG00000131591.16 C1orf159 chr1 1081818 1116361 - protein_coding KNOWN OTTHUMG00000000745.8 34544 6322 146 ENSG00000158062.19 UBXN11 chr1 26281328 26318363 - protein_coding KNOWN OTTHUMG00000003382.12 37036 4704 179 ENSG00000226410.1 AC104058.1 chr2 186162949 186163245 - processed_pseudogene KNOWN OTTHUMG00000154253.1 297 297 1 ENSG00000232568.2 RPL23AP35 chr2 186261419 186261919 - processed_pseudogene KNOWN OTTHUMG00000154255.2 501 501 1 ENSG00000259915.2 RP11-410E4.1 chr2 186354570 186356773 - lincRNA NOVEL OTTHUMG00000176270.2 2204 2204 1 ENSG00000227692.1 MED28P3 chr2 186364598 186365128 + processed_pseudogene KNOWN OTTHUMG00000154254.1 531 531 1 ENSG00000065548.16 ZC3H15 chr2 186486156 186509363 + protein_coding KNOWN OTTHUMG00000154251.4 23208 3125 47 ENSG00000224323.2 DPRXP1 chr2 186488624 186489083 - processed_pseudogene KNOWN OTTHUMG00000154252.2 460 460 1 ENSG00000281192.1 AC018867.1 chr2 186501707 186502265 - protein_coding NOVEL NA 559 72 2 ENSG00000138448.10 ITGAV chr2 186590065 186680901 + protein_coding KNOWN OTTHUMG00000132635.5 90837 8211 104 ENSG00000227227.1 AC017101.10 chr2 186641339 186695287 - antisense NOVEL OTTHUMG00000155451.1 53949 571 3 ENSG00000144369.11 FAM171B chr2 186693971 186765965 + protein_coding KNOWN OTTHUMG00000154278.3 71995 5826 14 ENSG00000169442.7 CD52 chr1 26317957 26320523 + protein_coding KNOWN OTTHUMG00000003491.2 2567 935 7 ENSG00000163012.3 ZSWIM2 chr2 186827835 186849208 - protein_coding KNOWN OTTHUMG00000154259.1 21374 2400 12 ENSG00000226553.1 AC018735.1 chr2 187001876 187003377 - processed_pseudogene KNOWN OTTHUMG00000154260.1 1502 1502 1 ENSG00000224063.4 AC007319.1 chr2 187003220 187554663 + antisense NOVEL OTTHUMG00000154263.2 551444 1472 14 ENSG00000222845.1 RN7SKP42 chr2 187122562 187122861 - misc_RNA KNOWN NA 300 300 1 ENSG00000199626.1 RNU6-989P chr2 187270698 187270804 - snRNA KNOWN NA 107 107 1 ENSG00000064989.11 CALCRL chr2 187343129 187448460 - protein_coding KNOWN OTTHUMG00000132636.4 105332 6144 71 ENSG00000231739.2 GAPDHP59 chr2 187415552 187415818 + processed_pseudogene KNOWN OTTHUMG00000154269.1 267 267 1 ENSG00000003436.13 TFPI chr2 187464230 187565760 - protein_coding KNOWN OTTHUMG00000132634.5 101531 11714 79 ENSG00000231689.1 LINC01090 chr2 187712816 188287691 - lincRNA NOVEL OTTHUMG00000154285.1 574876 1273 6 ENSG00000252004.2 AC068718.1 chr2 187742587 187742674 - miRNA NOVEL NA 88 88 1 ENSG00000176092.12 AIM1L chr1 26321859 26354130 - protein_coding KNOWN OTTHUMG00000003490.7 32272 5871 81 ENSG00000235616.1 ST13P2 chr2 187825341 187826449 + processed_pseudogene KNOWN OTTHUMG00000154284.1 1109 1109 1 ENSG00000213115.2 AC104131.1 chr2 188227189 188228382 + processed_pseudogene KNOWN OTTHUMG00000154283.1 1194 1194 1 ENSG00000200650.1 RNA5SP114 chr2 188276732 188276844 - rRNA KNOWN NA 113 113 1 ENSG00000144366.14 GULP1 chr2 188291669 188595931 + protein_coding KNOWN OTTHUMG00000132647.3 304263 11979 135 ENSG00000207951.1 MIR561 chr2 188297492 188297588 + miRNA KNOWN NA 97 97 1 ENSG00000223523.1 AC079613.1 chr2 188598791 188839445 - sense_overlapping NOVEL OTTHUMG00000154523.1 240655 797 8 ENSG00000174325.4 DIRC1 chr2 188734155 188790104 - protein_coding KNOWN OTTHUMG00000132646.2 55950 1037 2 ENSG00000168542.11 COL3A1 chr2 188974320 189012746 + protein_coding KNOWN OTTHUMG00000132648.5 38427 6811 104 ENSG00000281204.1 AC066694.1 chr2 188974419 188974555 + miRNA NOVEL NA 137 137 1 ENSG00000221502.1 MIR1245A chr2 188978092 188978161 + miRNA KNOWN NA 70 70 1 ENSG00000225854.2 RP11-569G9.7 chr1 26326688 26327033 + processed_pseudogene KNOWN OTTHUMG00000156993.2 346 346 1 ENSG00000204262.10 COL5A2 chr2 189031896 189179879 - protein_coding KNOWN OTTHUMG00000149842.2 147984 7156 109 ENSG00000228073.1 AC133106.2 chr2 189095063 189096158 + antisense NOVEL OTTHUMG00000154303.1 1096 397 2 ENSG00000264725.1 MIR3129 chr2 189133036 189133111 - miRNA KNOWN NA 76 76 1 ENSG00000277207.1 AC118063.2 chr2 189280928 189281017 - miRNA NOVEL NA 90 90 1 ENSG00000213601.3 KRT18P19 chr2 189311263 189311967 - processed_pseudogene KNOWN OTTHUMG00000154302.1 705 705 1 ENSG00000266817.1 AC118063.1 chr2 189311671 189311761 - miRNA NOVEL NA 91 91 1 ENSG00000115368.8 WDR75 chr2 189441433 189475565 + protein_coding KNOWN OTTHUMG00000132660.2 34133 5066 79 ENSG00000233996.1 AC013439.4 chr2 189486480 189487992 - processed_pseudogene KNOWN OTTHUMG00000154321.1 1513 1239 2 ENSG00000138449.9 SLC40A1 chr2 189560579 189583758 - protein_coding KNOWN OTTHUMG00000132662.3 23180 4330 34 ENSG00000276828.1 RP11-88L20.1 chr2 189625443 189626259 - unprocessed_pseudogene KNOWN OTTHUMG00000187702.1 817 640 2 ENSG00000176083.16 ZNF683 chr1 26361634 26374522 - protein_coding KNOWN OTTHUMG00000003521.4 12889 2379 44 ENSG00000138381.8 ASNSD1 chr2 189661385 189670831 + protein_coding KNOWN OTTHUMG00000132665.5 9447 2504 41 ENSG00000151687.13 ANKAR chr2 189674290 189761193 + protein_coding KNOWN OTTHUMG00000154398.3 86904 5758 103 ENSG00000128694.10 OSGEPL1 chr2 189746660 189763227 - protein_coding KNOWN OTTHUMG00000164096.1 16568 3583 48 ENSG00000223249.1 Y_RNA chr2 189753464 189753559 + misc_RNA NOVEL NA 96 96 1 ENSG00000253559.1 OSGEPL1-AS1 chr2 189762704 189765556 + antisense NOVEL OTTHUMG00000164097.1 2853 860 7 ENSG00000273240.1 RP11-455J20.3 chr2 189763859 189764456 - antisense NOVEL OTTHUMG00000186272.1 598 598 1 ENSG00000128699.12 ORMDL1 chr2 189770323 189784371 - protein_coding KNOWN OTTHUMG00000132661.4 14049 3958 23 ENSG00000064933.15 PMS1 chr2 189784085 189877629 + protein_coding KNOWN OTTHUMG00000132664.6 93545 5448 167 ENSG00000187699.9 C2orf88 chr2 189879609 190203484 + protein_coding KNOWN OTTHUMG00000154361.1 323876 5997 25 ENSG00000223824.1 AC019178.3 chr2 189917254 189917758 - processed_pseudogene KNOWN OTTHUMG00000154453.1 505 505 1 ENSG00000131914.9 LIN28A chr1 26410778 26429722 + protein_coding KNOWN OTTHUMG00000003550.2 18945 4008 9 ENSG00000204253.4 HNRNPCP2 chr2 189923336 189924216 + processed_pseudogene KNOWN OTTHUMG00000154452.1 881 881 1 ENSG00000213110.2 AC019178.2 chr2 189930277 189931010 - processed_pseudogene KNOWN OTTHUMG00000154451.1 734 440 2 ENSG00000138379.4 MSTN chr2 190055697 190062729 - protein_coding KNOWN OTTHUMG00000132663.2 7033 2822 3 ENSG00000198130.13 HIBCH chr2 190189735 190344193 - protein_coding KNOWN OTTHUMG00000132673.5 154459 7438 97 ENSG00000151689.11 INPP1 chr2 190343470 190371665 + protein_coding KNOWN OTTHUMG00000132672.5 28196 3676 64 ENSG00000151690.13 MFSD6 chr2 190408355 190509205 + protein_coding KNOWN OTTHUMG00000132671.2 100851 6031 42 ENSG00000272979.1 RP11-647K16.1 chr2 190454092 190454521 - antisense NOVEL OTTHUMG00000186273.1 430 430 1 ENSG00000189362.10 TMEM194B chr2 190504342 190534722 - protein_coding KNOWN OTTHUMG00000154454.1 30381 6521 34 ENSG00000233654.1 AC093388.3 chr2 190534855 190568102 + antisense NOVEL OTTHUMG00000154455.2 33248 404 3 ENSG00000251935.1 RN7SKP179 chr2 190553264 190553480 - misc_RNA KNOWN NA 217 217 1 ENSG00000117682.15 DHDDS chr1 26432282 26471294 + protein_coding KNOWN OTTHUMG00000003554.6 39013 5596 134 ENSG00000138386.15 NAB1 chr2 190646746 190692766 + protein_coding KNOWN OTTHUMG00000132689.2 46021 4887 46 ENSG00000228509.4 AC006460.2 chr2 190676944 190708716 - antisense NOVEL OTTHUMG00000154512.1 31773 1125 9 ENSG00000235852.1 AC005540.3 chr2 190880797 190882059 - antisense NOVEL OTTHUMG00000154511.1 1263 919 2 ENSG00000115419.11 GLS chr2 190880827 190965552 + protein_coding KNOWN OTTHUMG00000132701.3 84726 9827 95 ENSG00000280517.1 AC005540.1 chr2 190880854 190880942 + miRNA NOVEL NA 89 89 1 ENSG00000115415.17 STAT1 chr2 190964358 191020960 - protein_coding KNOWN OTTHUMG00000132699.4 56603 6053 170 ENSG00000229023.1 AC067945.3 chr2 190992639 190993567 - processed_pseudogene KNOWN OTTHUMG00000154514.1 929 618 2 ENSG00000230686.1 AC067945.2 chr2 191017954 191019079 + antisense NOVEL OTTHUMG00000154509.1 1126 623 2 ENSG00000231858.4 AC067945.4 chr2 191021526 191032314 + processed_transcript NOVEL OTTHUMG00000154513.1 10789 520 5 ENSG00000138378.16 STAT4 chr2 191029576 191151596 - protein_coding KNOWN OTTHUMG00000132700.4 122021 4250 95 ENSG00000223583.1 RP3-476K8.4 chr1 26454653 26455187 - processed_pseudogene KNOWN OTTHUMG00000003553.1 535 535 1 ENSG00000207402.1 RNU6-959P chr2 191121950 191122056 + snRNA KNOWN NA 107 107 1 ENSG00000280083.1 RP11-317J9.1 chr2 191154118 191156070 - TEC KNOWN OTTHUMG00000176273.1 1953 1953 1 ENSG00000230611.1 HMGB1P27 chr2 191174233 191174835 + processed_pseudogene KNOWN OTTHUMG00000154510.1 603 603 1 ENSG00000227542.1 AC092614.2 chr2 191229165 191246172 - lincRNA NOVEL OTTHUMG00000154306.1 17008 909 4 ENSG00000128641.16 MYO1B chr2 191245185 191425389 + protein_coding KNOWN OTTHUMG00000132718.8 180205 9527 172 ENSG00000278321.1 AC092614.1 chr2 191288794 191288878 - miRNA NOVEL NA 85 85 1 ENSG00000252130.1 RNU6-1045P chr2 191370938 191371044 + snRNA KNOWN NA 107 107 1 ENSG00000275235.1 AC068056.1 chr2 191450983 191451092 - miRNA NOVEL NA 110 110 1 ENSG00000173559.11 NABP1 chr2 191678068 191696659 + protein_coding KNOWN OTTHUMG00000132720.5 18592 13806 54 ENSG00000274845.1 uc_338 chr2 191682452 191682633 + misc_RNA NOVEL NA 182 182 1 ENSG00000225891.1 RP3-476K8.3 chr1 26462756 26467282 - antisense NOVEL OTTHUMG00000003552.1 4527 529 4 ENSG00000281467.1 Clostridiales-1 chr2 191699476 191699631 - sRNA NOVEL NA 156 156 1 ENSG00000225884.2 AC098872.3 chr2 191793425 191820250 + antisense NOVEL OTTHUMG00000154310.2 26826 543 4 ENSG00000168497.4 SDPR chr2 191834302 191847255 - protein_coding KNOWN OTTHUMG00000154309.2 12954 3229 2 ENSG00000233766.6 AC098617.1 chr2 191846539 192044525 + antisense NOVEL OTTHUMG00000154332.4 197987 5155 69 ENSG00000213946.3 DNAJB1P1 chr2 191881182 191882205 - processed_pseudogene KNOWN OTTHUMG00000154320.1 1024 1024 1 ENSG00000144339.10 TMEFF2 chr2 191949043 192195709 - protein_coding KNOWN OTTHUMG00000132723.4 246667 6632 27 ENSG00000229395.1 AC013401.1 chr2 192629919 192645706 + lincRNA NOVEL OTTHUMG00000154343.1 15788 565 2 ENSG00000232227.4 AC013401.2 chr2 192644102 192645387 - lincRNA NOVEL OTTHUMG00000154344.1 1286 626 4 ENSG00000227418.5 PCGEM1 chr2 192749845 192776899 + lincRNA KNOWN OTTHUMG00000154342.2 27055 1712 7 ENSG00000226242.1 RPS17P8 chr2 192774082 192774416 + processed_pseudogene KNOWN OTTHUMG00000154345.1 335 335 1 ENSG00000198830.9 HMGN2 chr1 26472450 26475972 + protein_coding KNOWN OTTHUMG00000003555.3 3523 2509 50 ENSG00000278406.1 PCGEM1 chr2 192775943 192776073 + misc_RNA NOVEL NA 131 131 1 ENSG00000232658.1 AC092638.1 chr2 193256483 193257757 + processed_pseudogene KNOWN OTTHUMG00000154353.1 1275 1275 1 ENSG00000235218.2 AC092638.2 chr2 193276668 193277614 - processed_pseudogene KNOWN OTTHUMG00000154357.1 947 947 1 ENSG00000224219.1 AC074290.1 chr2 193730555 193730689 - processed_pseudogene KNOWN OTTHUMG00000154354.1 135 135 1 ENSG00000260142.1 RP11-764E7.1 chr2 193898367 193899394 + lincRNA NOVEL OTTHUMG00000176276.1 1028 1028 1 ENSG00000224670.1 AC068135.1 chr2 194027919 194028164 + processed_pseudogene KNOWN OTTHUMG00000154359.1 246 246 1 ENSG00000215043.2 GLULP6 chr2 194129354 194130266 - processed_pseudogene KNOWN OTTHUMG00000154356.1 913 913 1 ENSG00000236695.1 HNRNPA1P47 chr2 194187379 194188309 + processed_pseudogene KNOWN OTTHUMG00000154355.1 931 931 1 ENSG00000225539.4 AC018799.1 chr2 194344269 194419645 + lincRNA NOVEL OTTHUMG00000154350.2 75377 1532 16 ENSG00000225394.1 AC106883.1 chr2 194454581 194455142 - processed_pseudogene KNOWN OTTHUMG00000154368.1 562 562 1 ENSG00000223823.1 LINC01342 chr1 1137017 1144056 + lincRNA NOVEL OTTHUMG00000000827.1 7040 1620 3 ENSG00000224129.1 DPPA2P2 chr1 26519354 26520250 - processed_pseudogene KNOWN OTTHUMG00000003551.1 897 897 1 ENSG00000264560.1 AC073973.1 chr2 194558174 194558274 - miRNA NOVEL NA 101 101 1 ENSG00000276123.1 Metazoa_SRP chr2 194658376 194658675 - misc_RNA NOVEL NA 300 300 1 ENSG00000252517.1 SNORD59 chr2 194664107 194664174 - snoRNA NOVEL NA 68 68 1 ENSG00000230173.1 AC006196.1 chr2 194730595 194761435 + lincRNA NOVEL OTTHUMG00000154367.1 30841 2852 4 ENSG00000235056.1 AC010983.1 chr2 195003711 195026370 - lincRNA NOVEL OTTHUMG00000154373.1 22660 1028 2 ENSG00000224099.1 AC064834.1 chr2 195448532 195478925 + lincRNA NOVEL OTTHUMG00000154379.1 30394 989 4 ENSG00000271893.1 RP11-762E8.1 chr2 195451778 195515699 - lincRNA NOVEL OTTHUMG00000185393.1 63922 503 3 ENSG00000202206.1 RNU6-169P chr2 195514036 195514142 + snRNA KNOWN NA 107 107 1 ENSG00000223466.1 AC064834.2 chr2 195533035 195538681 + lincRNA NOVEL OTTHUMG00000154381.1 5647 850 2 ENSG00000234919.1 AC064834.3 chr2 195569628 195572970 - lincRNA NOVEL OTTHUMG00000154378.1 3343 555 2 ENSG00000117676.12 RPS6KA1 chr1 26529761 26575030 + protein_coding KNOWN OTTHUMG00000004003.4 45270 5884 206 ENSG00000196950.12 SLC39A10 chr2 195575977 195737702 + protein_coding KNOWN OTTHUMG00000154380.3 161726 6917 52 ENSG00000213107.2 AHCYP5 chr2 195582794 195584031 - processed_pseudogene KNOWN OTTHUMG00000154377.1 1238 1238 1 ENSG00000201813.1 RNU6-915P chr2 195670372 195670474 - snRNA KNOWN NA 103 103 1 ENSG00000118997.12 DNAH7 chr2 195737703 196068812 - protein_coding KNOWN OTTHUMG00000154438.5 331110 21324 106 ENSG00000203435.2 E2F3P2 chr2 195994259 195995680 - processed_pseudogene KNOWN OTTHUMG00000154439.1 1422 1422 1 ENSG00000227878.2 AC114760.1 chr2 196063312 196063963 - processed_pseudogene KNOWN OTTHUMG00000154434.3 652 652 1 ENSG00000081320.9 STK17B chr2 196133566 196176503 - protein_coding KNOWN OTTHUMG00000132735.4 42938 6580 25 ENSG00000272211.1 RP11-347P5.1 chr2 196151263 196154881 + antisense NOVEL OTTHUMG00000185371.1 3619 2065 2 ENSG00000138411.9 HECW2 chr2 196194370 196593692 - protein_coding KNOWN OTTHUMG00000154435.8 399323 12692 69 ENSG00000229056.2 AC020571.3 chr2 196260024 196264204 + antisense NOVEL OTTHUMG00000154462.2 4181 1607 7 ENSG00000238705.1 MIR1976 chr1 26554542 26554593 + miRNA KNOWN NA 52 52 1 ENSG00000276200.1 Metazoa_SRP chr2 196289409 196289707 + misc_RNA NOVEL NA 299 299 1 ENSG00000144395.16 CCDC150 chr2 196639554 196763490 + protein_coding KNOWN OTTHUMG00000154475.5 123937 9683 150 ENSG00000252923.1 SCARNA16 chr2 196686148 196686330 - scaRNA NOVEL NA 183 183 1 ENSG00000119041.9 GTF3C3 chr2 196763032 196799725 - protein_coding KNOWN OTTHUMG00000154633.2 36694 7105 59 ENSG00000187944.2 C2orf66 chr2 196805002 196810276 - protein_coding KNOWN OTTHUMG00000132742.1 5275 1669 3 ENSG00000280176.1 RP11-84A12.1 chr2 196831975 196832190 - TEC KNOWN OTTHUMG00000176277.1 216 216 1 ENSG00000197121.13 PGAP1 chr2 196833004 196927796 - protein_coding KNOWN OTTHUMG00000132743.5 94793 12761 143 ENSG00000065413.15 ANKRD44 chr2 196967017 197311173 - protein_coding KNOWN OTTHUMG00000154411.8 344157 11665 143 ENSG00000225636.1 HNRNPA3P15 chr2 197014990 197016015 + processed_pseudogene KNOWN OTTHUMG00000154408.1 1026 1026 1 ENSG00000224442.1 AC017035.2 chr2 197028711 197030143 - processed_pseudogene KNOWN OTTHUMG00000154407.1 1433 1115 2 ENSG00000243905.3 RN7SL679P chr1 26593243 26593546 - misc_RNA KNOWN NA 304 304 1 ENSG00000231621.1 AC013264.2 chr2 197197991 197199273 + antisense NOVEL OTTHUMG00000154428.1 1283 455 2 ENSG00000236977.1 ANKRD44-IT1 chr2 197250858 197302519 - sense_intronic NOVEL OTTHUMG00000154409.1 51662 1069 6 ENSG00000230482.1 ATP5G2P3 chr2 197263111 197263535 + processed_pseudogene KNOWN OTTHUMG00000154410.2 425 425 1 ENSG00000225979.1 AC010746.3 chr2 197311393 197312740 + antisense NOVEL OTTHUMG00000154427.1 1348 452 2 ENSG00000213104.3 NPM1P46 chr2 197379701 197380892 - processed_pseudogene KNOWN OTTHUMG00000154445.1 1192 865 2 ENSG00000115524.14 SF3B1 chr2 197389784 197435091 - protein_coding KNOWN OTTHUMG00000154447.4 45308 9164 63 ENSG00000202434.1 SNORA4 chr2 197404718 197404854 + snoRNA NOVEL NA 137 137 1 ENSG00000206836.1 RNU6-1029P chr2 197447745 197447851 + snRNA KNOWN NA 107 107 1 ENSG00000115520.7 COQ10B chr2 197453423 197475308 + protein_coding KNOWN OTTHUMG00000132745.2 21886 2722 16 ENSG00000144381.15 HSPD1 chr2 197486581 197516737 - protein_coding KNOWN OTTHUMG00000154463.2 30157 4245 72 ENSG00000252802.1 Y_RNA chr1 26593940 26594041 - misc_RNA NOVEL NA 102 102 1 ENSG00000115541.9 HSPE1 chr2 197499994 197503457 + protein_coding KNOWN OTTHUMG00000132749.2 3464 1977 19 ENSG00000270757.1 HSPE1-MOB4 chr2 197500413 197550726 + protein_coding NOVEL OTTHUMG00000184877.1 50314 890 9 ENSG00000115540.13 MOB4 chr2 197515571 197553699 + protein_coding KNOWN OTTHUMG00000132748.4 38129 4296 57 ENSG00000231699.1 AC020550.7 chr2 197533803 197533965 + processed_pseudogene KNOWN OTTHUMG00000154489.1 163 163 1 ENSG00000162944.9 RFTN2 chr2 197568224 197676045 - protein_coding KNOWN OTTHUMG00000132746.4 107822 6007 22 ENSG00000222017.1 AC011997.1 chr2 197693106 197774823 + antisense NOVEL OTTHUMG00000154488.1 81718 1032 4 ENSG00000247626.4 MARS2 chr2 197705369 197708387 + protein_coding KNOWN OTTHUMG00000154487.2 3019 3019 1 ENSG00000152430.16 BOLL chr2 197726879 197786762 - protein_coding KNOWN OTTHUMG00000132747.4 59884 4004 69 ENSG00000115896.14 PLCL1 chr2 197804702 198572581 + protein_coding KNOWN OTTHUMG00000132750.7 767880 8013 31 ENSG00000237035.1 AC109589.1 chr2 198187802 198191521 - lincRNA NOVEL OTTHUMG00000154464.1 3720 618 4 ENSG00000252429.2 RNU7-29P chr1 26602369 26602432 - snRNA KNOWN NA 64 64 1 ENSG00000236653.1 AC005235.1 chr2 198299363 198375097 - lincRNA NOVEL OTTHUMG00000154465.2 75735 2966 6 ENSG00000225421.1 AC019330.1 chr2 198553195 198772356 - lincRNA NOVEL OTTHUMG00000154467.2 219162 504 3 ENSG00000252511.1 AC019330.2 chr2 198566645 198566729 - miRNA NOVEL NA 85 85 1 ENSG00000280599.1 AC068121.1 chr2 198701022 198701166 + miRNA NOVEL NA 145 145 1 ENSG00000231557.1 AC018717.1 chr2 198882573 199071791 - lincRNA NOVEL OTTHUMG00000154472.2 189219 556 3 ENSG00000230407.1 AC018717.2 chr2 199108584 199110088 + processed_pseudogene KNOWN OTTHUMG00000154471.2 1505 1505 1 ENSG00000238698.1 RNU7-147P chr2 199191059 199191120 + snRNA KNOWN NA 62 62 1 ENSG00000119042.15 SATB2 chr2 199269500 199471266 - protein_coding KNOWN OTTHUMG00000132767.5 201767 10958 78 ENSG00000257045.1 RP11-486F17.1 chr2 199325310 199329362 + antisense NOVEL OTTHUMG00000168440.1 4053 831 3 ENSG00000225953.2 SATB2-AS1 chr2 199457700 199476935 + antisense KNOWN OTTHUMG00000154470.1 19236 4470 12 ENSG00000229247.2 RP11-492M19.3 chr1 26640377 26640614 - processed_pseudogene KNOWN OTTHUMG00000057505.2 238 238 1 ENSG00000238217.4 AC093590.1 chr2 199608068 199659132 + lincRNA NOVEL OTTHUMG00000154493.2 51065 2473 19 ENSG00000213938.3 SEPHS1P6 chr2 199659551 199660729 + processed_pseudogene KNOWN OTTHUMG00000154492.1 1179 1179 1 ENSG00000226124.5 FTCDNL1 chr2 199760544 199851173 - protein_coding KNOWN OTTHUMG00000154481.3 90630 2708 18 ENSG00000232732.8 AC073043.1 chr2 199867396 199911159 - processed_transcript NOVEL OTTHUMG00000154483.8 43764 6656 163 ENSG00000227004.2 AC108032.1 chr2 199872172 199872378 + processed_pseudogene KNOWN OTTHUMG00000154482.2 207 207 1 ENSG00000240302.3 RN7SL717P chr2 199901081 199901377 - misc_RNA KNOWN NA 297 297 1 ENSG00000178074.5 C2orf69 chr2 199911256 199955935 + protein_coding KNOWN OTTHUMG00000154480.1 44680 4296 4 ENSG00000162971.9 TYW5 chr2 199929975 199955736 - protein_coding KNOWN OTTHUMG00000132770.3 25762 10496 32 ENSG00000162972.9 C2orf47 chr2 199955317 200008540 + protein_coding KNOWN OTTHUMG00000132771.4 53224 1624 19 ENSG00000196141.11 SPATS2L chr2 200305881 200482263 + protein_coding KNOWN OTTHUMG00000154589.13 176383 10437 222 ENSG00000238316.1 snoU13 chr1 26642286 26642389 - snoRNA NOVEL NA 104 104 1 ENSG00000201649.1 RNY4P34 chr2 200373175 200373269 + misc_RNA KNOWN NA 95 95 1 ENSG00000280896.1 Metazoa_SRP chr2 200460651 200460976 - misc_RNA NOVEL NA 326 326 1 ENSG00000155729.11 KCTD18 chr2 200488952 200519784 - protein_coding KNOWN OTTHUMG00000132781.2 30833 4915 29 ENSG00000163535.16 SGOL2 chr2 200510008 200583782 + protein_coding KNOWN OTTHUMG00000154535.1 73775 6022 28 ENSG00000138356.12 AOX1 chr2 200585868 200677064 + protein_coding KNOWN OTTHUMG00000154536.4 91197 5556 106 ENSG00000276477.1 AC007163.1 chr2 200675855 200675945 - miRNA NOVEL NA 91 91 1 ENSG00000244301.4 AOX3P chr2 200678233 200738781 + unitary_pseudogene KNOWN OTTHUMG00000154534.3 60549 4443 35 ENSG00000280298.1 AC007163.2 chr2 200682822 200683196 + protein_coding KNOWN NA 375 375 1 ENSG00000243478.6 AOX2P chr2 200695917 200794239 + unitary_pseudogene KNOWN OTTHUMG00000154538.5 98323 3932 57 ENSG00000237166.1 AC007163.3 chr2 200712305 200735177 - lincRNA NOVEL OTTHUMG00000154537.1 22873 2050 3 ENSG00000235069.2 RP4-785J1.1 chr1 26647447 26647681 + processed_pseudogene KNOWN OTTHUMG00000057507.2 235 235 1 ENSG00000201737.1 RNU1-133P chr2 200775584 200775750 + snRNA KNOWN NA 167 167 1 ENSG00000230408.3 AC007163.6 chr2 200780495 200812170 - antisense NOVEL OTTHUMG00000154546.3 31676 877 4 ENSG00000082153.16 BZW1 chr2 200810594 200827338 + protein_coding KNOWN OTTHUMG00000154560.18 16745 8085 84 ENSG00000207116.1 RNU6-31P chr2 200830009 200830116 + snRNA KNOWN NA 108 108 1 ENSG00000221530.1 AC005037.1 chr2 200843186 200843299 - miRNA NOVEL NA 114 114 1 ENSG00000224346.1 BICD1P1 chr2 200844240 200845461 + processed_pseudogene KNOWN OTTHUMG00000154576.2 1222 1222 1 ENSG00000223092.1 RNA5SP115 chr2 200849038 200849144 - rRNA KNOWN NA 107 107 1 ENSG00000013441.14 CLK1 chr2 200853009 200864744 - protein_coding KNOWN OTTHUMG00000132784.3 11736 5170 105 ENSG00000252759.1 Y_RNA chr2 200863152 200863247 - misc_RNA NOVEL NA 96 96 1 ENSG00000240344.7 PPIL3 chr2 200870907 200889303 - protein_coding KNOWN OTTHUMG00000132782.24 18397 2914 84 ENSG00000260063.1 RP5-968P14.2 chr1 26692132 26694131 - antisense NOVEL OTTHUMG00000175777.1 2000 2000 1 ENSG00000201499.1 RNU6-312P chr2 200881715 200881821 - snRNA KNOWN NA 107 107 1 ENSG00000196290.13 NIF3L1 chr2 200889327 200903930 + protein_coding KNOWN OTTHUMG00000154588.2 14604 1985 45 ENSG00000252916.1 RNU6-762P chr2 200899020 200899121 + snRNA KNOWN NA 102 102 1 ENSG00000115942.7 ORC2 chr2 200908973 200963680 - protein_coding KNOWN OTTHUMG00000132783.23 54708 5835 46 ENSG00000183308.6 AC005037.3 chr2 200963263 201009102 + antisense NOVEL OTTHUMG00000154691.1 45840 973 4 ENSG00000155744.8 FAM126B chr2 200973718 201071671 - protein_coding KNOWN OTTHUMG00000132823.14 97954 12810 67 ENSG00000225695.1 HNRNPA1P35 chr2 201063089 201064051 + processed_pseudogene KNOWN OTTHUMG00000154714.1 963 963 1 ENSG00000226658.1 AC005037.4 chr2 201066691 201067191 + processed_pseudogene KNOWN OTTHUMG00000154712.2 501 501 1 ENSG00000119013.7 NDUFB3 chr2 201071433 201085750 + protein_coding KNOWN OTTHUMG00000132820.2 14318 1103 14 ENSG00000252148.1 RNU6-1206P chr2 201079842 201079944 + snRNA KNOWN NA 103 103 1 ENSG00000207730.2 MIR200B chr1 1167092 1167202 + miRNA KNOWN NA 111 111 1 ENSG00000117713.16 ARID1A chr1 26696033 26782104 + protein_coding KNOWN OTTHUMG00000004004.7 86072 9246 103 ENSG00000273975.1 Metazoa_SRP chr2 201097744 201098091 + misc_RNA NOVEL NA 348 348 1 ENSG00000232719.1 RP11-13J8.1 chr2 201101382 201103136 + lincRNA NOVEL OTTHUMG00000157083.1 1755 1269 2 ENSG00000224672.4 AC007272.3 chr2 201102089 201102957 - processed_pseudogene KNOWN OTTHUMG00000154710.1 869 555 2 ENSG00000003402.18 CFLAR chr2 201116104 201176687 + protein_coding KNOWN OTTHUMG00000132819.17 60584 22529 139 ENSG00000232133.1 IMPDH1P10 chr2 201137516 201140027 - processed_pseudogene KNOWN OTTHUMG00000154711.1 2512 1542 2 ENSG00000226312.6 CFLAR-AS1 chr2 201140278 201157823 - antisense KNOWN OTTHUMG00000154713.4 17546 4334 107 ENSG00000238829.1 RNU7-45P chr2 201141904 201141966 + snRNA KNOWN NA 63 63 1 ENSG00000235579.1 AC007283.4 chr2 201162484 201162680 - processed_pseudogene KNOWN OTTHUMG00000154715.1 197 197 1 ENSG00000234431.2 AC007283.5 chr2 201166965 201167546 + 3prime_overlapping_ncrna NOVEL OTTHUMG00000154717.1 582 445 2 ENSG00000003400.13 CASP10 chr2 201182881 201229406 + protein_coding KNOWN OTTHUMG00000132818.4 46526 7598 87 ENSG00000060642.9 PIGV chr1 26787472 26798398 + protein_coding KNOWN OTTHUMG00000004005.4 10927 3382 22 ENSG00000227348.1 MTND5P25 chr2 201212283 201213081 - unprocessed_pseudogene KNOWN OTTHUMG00000154740.1 799 799 1 ENSG00000225796.2 MTND4P23 chr2 201213298 201214660 - unprocessed_pseudogene KNOWN OTTHUMG00000154739.1 1363 1363 1 ENSG00000235318.3 AC005037.6 chr2 201214653 201214950 - unprocessed_pseudogene KNOWN OTTHUMG00000154738.1 298 298 1 ENSG00000064012.20 CASP8 chr2 201233443 201287711 + protein_coding KNOWN OTTHUMG00000132821.15 54269 7243 121 ENSG00000155749.11 ALS2CR12 chr2 201288271 201357398 - protein_coding KNOWN OTTHUMG00000132824.5 69128 2635 97 ENSG00000115993.10 TRAK2 chr2 201377207 201451611 - protein_coding KNOWN OTTHUMG00000132822.11 74405 7627 48 ENSG00000082146.11 STRADB chr2 201387858 201480846 + protein_coding KNOWN OTTHUMG00000132831.5 92989 3242 56 ENSG00000213090.2 AC007256.5 chr2 201410544 201413308 - processed_pseudogene KNOWN OTTHUMG00000154748.1 2765 2765 1 ENSG00000202008.1 Y_RNA chr2 201423513 201423604 + misc_RNA NOVEL NA 92 92 1 ENSG00000155754.13 ALS2CR11 chr2 201487425 201619178 - protein_coding KNOWN OTTHUMG00000132830.3 131754 6815 59 ENSG00000241188.3 RN7SL165P chr1 26814822 26815112 + misc_RNA KNOWN NA 291 291 1 ENSG00000234842.1 AC007163.8 chr2 201549631 201550307 + unprocessed_pseudogene KNOWN OTTHUMG00000154761.1 677 677 1 ENSG00000224299.1 AC007282.6 chr2 201550524 201551049 + unprocessed_pseudogene KNOWN OTTHUMG00000154759.1 526 526 1 ENSG00000227736.1 AC007163.9 chr2 201552859 201553612 + unprocessed_pseudogene KNOWN OTTHUMG00000154756.1 754 754 1 ENSG00000224590.1 AC007163.10 chr2 201553688 201554031 + unprocessed_pseudogene KNOWN OTTHUMG00000154755.1 344 344 1 ENSG00000234731.2 AC007163.11 chr2 201554096 201554390 + unprocessed_pseudogene KNOWN OTTHUMG00000154758.1 295 295 1 ENSG00000249177.1 MTND4P29 chr2 201554384 201556051 + unprocessed_pseudogene KNOWN OTTHUMG00000154760.1 1668 1372 2 ENSG00000227841.1 MTND5P31 chr2 201556892 201558265 + unprocessed_pseudogene KNOWN OTTHUMG00000154757.1 1374 1374 1 ENSG00000155755.17 TMEM237 chr2 201620184 201643570 - protein_coding KNOWN OTTHUMG00000154526.9 23387 7647 100 ENSG00000241790.2 ENO1P4 chr2 201621646 201623430 - processed_pseudogene KNOWN OTTHUMG00000154527.3 1785 1785 1 ENSG00000082126.16 MPP4 chr2 201644870 201698694 - protein_coding KNOWN OTTHUMG00000154525.6 53825 4924 198 ENSG00000204160.10 ZDHHC18 chr1 26826710 26857602 + protein_coding KNOWN OTTHUMG00000004092.4 30893 5436 31 ENSG00000222972.1 RNU6-651P chr2 201646716 201646820 + snRNA KNOWN NA 105 105 1 ENSG00000003393.13 ALS2 chr2 201700554 201781189 - protein_coding KNOWN OTTHUMG00000154507.6 80636 10384 133 ENSG00000281201.1 AC007279.1 chr2 201756774 201756898 + miRNA NOVEL NA 125 125 1 ENSG00000230799.1 AC007279.2 chr2 201762737 201763573 + processed_pseudogene KNOWN OTTHUMG00000154566.1 837 837 1 ENSG00000138395.13 CDK15 chr2 201790461 201895550 + protein_coding KNOWN OTTHUMG00000132838.5 105090 6141 93 ENSG00000202137.1 Y_RNA chr2 201808681 201808782 + misc_RNA NOVEL NA 102 102 1 ENSG00000231124.1 UBE2V1P11 chr2 201824548 201824832 + processed_pseudogene KNOWN OTTHUMG00000154567.2 285 285 1 ENSG00000221374.1 AC007242.1 chr2 201841129 201841230 + miRNA NOVEL NA 102 102 1 ENSG00000212184.1 RNU6-440P chr2 201927439 201927543 + snRNA KNOWN NA 105 105 1 ENSG00000221489.1 AC007358.1 chr2 201953257 201953336 - miRNA NOVEL NA 80 80 1 ENSG00000175793.11 SFN chr1 26863138 26864457 + protein_coding KNOWN OTTHUMG00000004093.1 1320 1320 1 ENSG00000273209.1 RP11-107N15.1 chr2 202032770 202033537 - lincRNA NOVEL OTTHUMG00000186300.1 768 768 1 ENSG00000155760.2 FZD7 chr2 202034587 202038445 + protein_coding KNOWN OTTHUMG00000132841.1 3859 3859 1 ENSG00000182329.9 KIAA2012 chr2 202073255 202197862 + protein_coding KNOWN OTTHUMG00000154580.3 124608 7612 72 ENSG00000222035.3 AC079354.3 chr2 202113626 202117058 - antisense NOVEL OTTHUMG00000154578.2 3433 3093 2 ENSG00000274633.1 AC079354.1 chr2 202115167 202115260 - miRNA NOVEL NA 94 94 1 ENSG00000231903.1 AC079354.5 chr2 202178660 202179391 - antisense NOVEL OTTHUMG00000154582.1 732 311 2 ENSG00000227890.1 PSMA2P3 chr2 202179297 202179971 + processed_pseudogene KNOWN OTTHUMG00000154579.1 675 675 1 ENSG00000223825.5 DAZAP2P1 chr2 202201384 202201886 - processed_pseudogene KNOWN OTTHUMG00000154581.1 503 503 1 ENSG00000116030.15 SUMO1 chr2 202206180 202238608 - protein_coding KNOWN OTTHUMG00000132839.5 32429 2164 52 ENSG00000224463.1 AC079354.6 chr2 202231696 202231849 + processed_pseudogene KNOWN OTTHUMG00000154597.1 154 154 1 ENSG00000142751.13 GPN2 chr1 26876133 26890297 - protein_coding KNOWN OTTHUMG00000004227.4 14165 4979 19 ENSG00000055044.9 NOP58 chr2 202265716 202303666 + protein_coding KNOWN OTTHUMG00000132840.3 37951 3299 60 ENSG00000212534.1 SNORD70 chr2 202276431 202276518 + snoRNA KNOWN NA 88 88 1 ENSG00000212309.1 SNORD70 chr2 202278108 202278192 + snoRNA NOVEL NA 85 85 1 ENSG00000271852.1 SNORD11B chr2 202291332 202291421 + snoRNA KNOWN NA 90 90 1 ENSG00000238317.2 SNORD11 chr2 202293051 202293134 + snoRNA KNOWN NA 84 84 1 ENSG00000264275.1 RN7SL753P chr2 202333439 202333728 + misc_RNA KNOWN NA 290 290 1 ENSG00000281619.1 AC064836.1 chr2 202333642 202333724 + miRNA NOVEL NA 83 83 1 ENSG00000226261.1 AC064836.3 chr2 202336024 202336727 - processed_pseudogene KNOWN OTTHUMG00000154608.1 704 704 1 ENSG00000272966.1 RP11-686O6.1 chr2 202336739 202337200 + lincRNA NOVEL OTTHUMG00000186302.1 462 462 1 ENSG00000242696.3 RN7SL40P chr2 202357076 202357417 - misc_RNA KNOWN NA 342 342 1 ENSG00000226698.1 RP1-50O24.6 chr1 26876133 26878245 + antisense NOVEL OTTHUMG00000004228.1 2113 306 2 ENSG00000273456.1 RP11-686O6.2 chr2 202374932 202375604 - lincRNA NOVEL OTTHUMG00000186303.1 673 673 1 ENSG00000204217.11 BMPR2 chr2 202376936 202567751 + protein_coding KNOWN OTTHUMG00000133617.4 190816 11893 28 ENSG00000270915.1 RP11-27M5.1 chr2 202505012 202505343 - processed_pseudogene KNOWN OTTHUMG00000184348.1 332 332 1 ENSG00000236047.1 AC073410.1 chr2 202520401 202520989 + processed_pseudogene KNOWN OTTHUMG00000154607.1 589 589 1 ENSG00000223619.1 AC009960.1 chr2 202614214 202614704 + unprocessed_pseudogene KNOWN OTTHUMG00000154675.1 491 491 1 ENSG00000233888.2 AC009960.2 chr2 202614853 202615529 + unprocessed_pseudogene KNOWN OTTHUMG00000154676.3 677 677 1 ENSG00000235433.1 AC009960.4 chr2 202615769 202616440 + unprocessed_pseudogene KNOWN OTTHUMG00000154677.1 672 672 1 ENSG00000237542.1 AC009960.5 chr2 202616700 202617212 + unprocessed_pseudogene KNOWN OTTHUMG00000154678.1 513 513 1 ENSG00000233134.1 AC009960.7 chr2 202617284 202617627 + unprocessed_pseudogene KNOWN OTTHUMG00000154680.2 344 344 1 ENSG00000241221.2 AC009960.6 chr2 202617695 202617987 + unprocessed_pseudogene KNOWN OTTHUMG00000154672.3 293 293 1 ENSG00000198746.11 GPATCH3 chr1 26890488 26900466 - protein_coding KNOWN OTTHUMG00000004229.2 9979 2225 13 ENSG00000227454.2 MTND4P30 chr2 202617983 202618881 + unprocessed_pseudogene KNOWN OTTHUMG00000154679.1 899 899 1 ENSG00000233311.1 AC009960.3 chr2 202619185 202619896 - processed_pseudogene KNOWN OTTHUMG00000154673.1 712 712 1 ENSG00000138439.11 FAM117B chr2 202635188 202769757 + protein_coding KNOWN OTTHUMG00000154550.3 134570 5986 11 ENSG00000163596.15 ICA1L chr2 202773150 202871985 - protein_coding KNOWN OTTHUMG00000132856.13 98836 10598 138 ENSG00000240761.1 AC098831.4 chr2 202773720 202774360 - processed_pseudogene KNOWN OTTHUMG00000155491.1 641 552 2 ENSG00000233579.1 KRT8P15 chr2 202840331 202841781 - processed_pseudogene KNOWN OTTHUMG00000154529.1 1451 1451 1 ENSG00000281423.1 AC010900.1 chr2 202840949 202841082 + miRNA NOVEL NA 134 134 1 ENSG00000138442.8 WDR12 chr2 202874782 203014798 - protein_coding KNOWN OTTHUMG00000132855.5 140017 9098 35 ENSG00000138380.16 CARF chr2 202912214 202987063 + protein_coding KNOWN OTTHUMG00000154528.7 74850 8636 177 ENSG00000232479.2 AC010900.2 chr2 202924609 202925904 + processed_pseudogene KNOWN OTTHUMG00000154530.2 1296 1296 1 ENSG00000090273.12 NUDC chr1 26900238 26946862 + protein_coding KNOWN OTTHUMG00000004226.10 46625 2856 23 ENSG00000270664.1 RP11-544H14.1 chr2 202995194 202995403 + processed_pseudogene KNOWN OTTHUMG00000184259.1 210 210 1 ENSG00000144426.17 NBEAL1 chr2 203014879 203226378 + protein_coding KNOWN OTTHUMG00000154129.7 211500 16376 111 ENSG00000232994.1 RPL7P14 chr2 203040108 203040899 + processed_pseudogene KNOWN OTTHUMG00000154574.2 792 741 2 ENSG00000202059.1 SNORA1 chr2 203052285 203052418 - snoRNA NOVEL NA 134 134 1 ENSG00000228513.1 AC023271.1 chr2 203061314 203062403 - processed_pseudogene KNOWN OTTHUMG00000154096.2 1090 1090 1 ENSG00000225124.1 AC023271.2 chr2 203074685 203075142 - processed_pseudogene KNOWN OTTHUMG00000154573.2 458 458 1 ENSG00000204196.5 AC011737.2 chr2 203190780 203191277 + processed_pseudogene KNOWN OTTHUMG00000155492.1 498 498 1 ENSG00000119004.13 CYP20A1 chr2 203238449 203305840 + protein_coding KNOWN OTTHUMG00000132854.13 67392 10961 113 ENSG00000264041.2 RN7SL670P chr2 203259604 203259897 + misc_RNA KNOWN NA 294 294 1 ENSG00000238285.1 MRPL50P2 chr2 203315390 203315871 - processed_pseudogene KNOWN OTTHUMG00000154584.1 482 482 1 ENSG00000131910.4 NR0B2 chr1 26911489 26913966 - protein_coding KNOWN OTTHUMG00000004231.1 2478 1156 2 ENSG00000138443.14 ABI2 chr2 203328219 203447723 + protein_coding KNOWN OTTHUMG00000132879.14 119505 23331 163 ENSG00000256458.1 RP11-363J17.1 chr2 203328459 203329226 - antisense NOVEL OTTHUMG00000168729.1 768 427 2 ENSG00000173166.16 RAPH1 chr2 203394345 203535410 - protein_coding KNOWN OTTHUMG00000132876.5 141066 11697 153 ENSG00000233459.1 AC125238.2 chr2 203634577 203636016 - processed_pseudogene KNOWN OTTHUMG00000154624.1 1440 1440 1 ENSG00000233031.1 AC125238.3 chr2 203672175 203672423 - processed_pseudogene KNOWN OTTHUMG00000154625.1 249 249 1 ENSG00000178562.16 CD28 chr2 203706475 203738912 + protein_coding KNOWN OTTHUMG00000132878.4 32438 4885 11 ENSG00000224791.1 KRT18P39 chr2 203764295 203765593 - processed_pseudogene KNOWN OTTHUMG00000154623.1 1299 1299 1 ENSG00000211573.2 AC125238.1 chr2 203764707 203764798 - miRNA NOVEL NA 92 92 1 ENSG00000213925.3 NPM1P33 chr2 203772631 203773502 - processed_pseudogene KNOWN OTTHUMG00000154626.1 872 872 1 ENSG00000206970.1 RNU6-474P chr2 203782037 203782143 + snRNA KNOWN NA 107 107 1 ENSG00000207607.2 MIR200A chr1 1167846 1167956 + miRNA KNOWN NA 111 111 1 ENSG00000175707.8 KDF1 chr1 26949562 26960406 - protein_coding KNOWN OTTHUMG00000004272.1 10845 1793 9 ENSG00000163599.13 CTLA4 chr2 203867786 203873960 + protein_coding KNOWN OTTHUMG00000132877.4 6175 2120 15 ENSG00000163600.11 ICOS chr2 203936748 203961577 + protein_coding KNOWN OTTHUMG00000132880.2 24830 2645 9 ENSG00000235951.1 AC009965.1 chr2 204065706 204067363 + processed_pseudogene KNOWN OTTHUMG00000154539.1 1658 970 2 ENSG00000234714.1 AC009965.2 chr2 204090457 204109849 + lincRNA NOVEL OTTHUMG00000154540.1 19393 570 5 ENSG00000237271.1 AC009498.1 chr2 204228137 204234985 - lincRNA NOVEL OTTHUMG00000154544.1 6849 541 2 ENSG00000236681.1 DSTNP5 chr2 204306842 204307364 + processed_pseudogene KNOWN OTTHUMG00000154541.1 523 523 1 ENSG00000225304.1 AC106901.1 chr2 204379095 204379792 + processed_pseudogene KNOWN OTTHUMG00000154545.1 698 698 1 ENSG00000236634.1 AC016903.1 chr2 204470076 204473837 - lincRNA NOVEL OTTHUMG00000154543.1 3762 588 2 ENSG00000237843.1 AC016903.2 chr2 204475356 204507672 + lincRNA NOVEL OTTHUMG00000154542.1 32317 326 2 ENSG00000116117.16 PARD3B chr2 204545793 205620162 + protein_coding KNOWN OTTHUMG00000154562.3 1074370 10382 189 ENSG00000172746.6 RP11-344H11.4 chr1 26980165 26980975 + unprocessed_pseudogene KNOWN OTTHUMG00000004274.1 811 497 2 ENSG00000223890.1 AC008171.1 chr2 205253304 205253503 - processed_pseudogene KNOWN OTTHUMG00000154565.1 200 200 1 ENSG00000118257.15 NRP2 chr2 205681990 205798133 + protein_coding KNOWN OTTHUMG00000132893.4 116144 13896 126 ENSG00000225216.5 AC007362.3 chr2 205756469 205764006 - antisense NOVEL OTTHUMG00000154647.3 7538 1623 43 ENSG00000201875.1 RN7SKP178 chr2 205900630 205900958 + misc_RNA KNOWN NA 329 329 1 ENSG00000213739.3 AC007679.1 chr2 205949091 205950145 + processed_pseudogene KNOWN OTTHUMG00000154643.2 1055 502 2 ENSG00000225610.1 AC007679.3 chr2 205989585 206000858 + antisense NOVEL OTTHUMG00000154652.1 11274 781 3 ENSG00000114933.14 INO80D chr2 205993721 206086303 - protein_coding KNOWN OTTHUMG00000154649.1 92583 14373 23 ENSG00000252485.1 Vault chr2 206007880 206007974 - misc_RNA NOVEL NA 95 95 1 ENSG00000207386.1 Y_RNA chr2 206025593 206025697 + misc_RNA NOVEL NA 105 105 1 ENSG00000237041.1 AC007679.4 chr2 206040432 206040845 + processed_pseudogene KNOWN OTTHUMG00000154655.2 414 414 1 ENSG00000224064.1 RP11-344H11.5 chr1 26983628 26984024 + processed_pseudogene KNOWN OTTHUMG00000004275.1 397 397 1 ENSG00000227946.1 AC007383.3 chr2 206084605 206086564 + lincRNA NOVEL OTTHUMG00000154653.1 1960 1034 4 ENSG00000023228.12 NDUFS1 chr2 206114817 206159603 - protein_coding KNOWN OTTHUMG00000132892.5 44787 12268 140 ENSG00000231955.1 AC007383.4 chr2 206115547 206122323 + antisense NOVEL OTTHUMG00000154651.1 6777 1411 2 ENSG00000237580.1 GCSHP3 chr2 206116110 206116500 - processed_pseudogene KNOWN OTTHUMG00000154650.1 391 391 1 ENSG00000114942.12 EEF1B2 chr2 206159585 206162928 + protein_coding KNOWN OTTHUMG00000132891.2 3344 1915 53 ENSG00000277502.1 uc_338 chr2 206160843 206161024 + misc_RNA NOVEL NA 182 182 1 ENSG00000281780.1 snoZ196 chr2 206161841 206161929 + snoRNA NOVEL NA 89 89 1 ENSG00000207047.2 SNORD51 chr2 206161878 206161957 + snoRNA KNOWN NA 80 80 1 ENSG00000207406.1 SNORA41 chr2 206162228 206162359 + snoRNA KNOWN NA 132 132 1 ENSG00000183671.11 GPR1 chr2 206175316 206218047 - protein_coding KNOWN OTTHUMG00000132894.2 42732 2834 32 ENSG00000225294.1 OSTCP2 chr1 26985897 26986340 - processed_pseudogene KNOWN OTTHUMG00000004276.1 444 444 1 ENSG00000279220.1 GPR1-AS chr2 206203376 206266243 + processed_transcript KNOWN OTTHUMG00000189431.1 62868 4129 8 ENSG00000222496.1 RN7SKP200 chr2 206221315 206221634 + misc_RNA KNOWN NA 320 320 1 ENSG00000159186.4 AC007383.6 chr2 206236236 206236871 - processed_pseudogene KNOWN OTTHUMG00000154644.1 636 636 1 ENSG00000224070.1 HMGN1P6 chr2 206259628 206259918 - processed_pseudogene KNOWN OTTHUMG00000154645.1 291 291 1 ENSG00000252716.1 RN7SKP260 chr2 206260066 206260214 - misc_RNA KNOWN NA 149 149 1 ENSG00000204186.6 ZDBF2 chr2 206274663 206314428 + protein_coding KNOWN OTTHUMG00000154648.2 39766 10340 8 ENSG00000279921.1 AC017081.1 chr2 206355739 206356119 + protein_coding KNOWN NA 381 381 1 ENSG00000180105.11 AC017081.2 chr2 206410087 206410909 - processed_pseudogene KNOWN OTTHUMG00000154654.2 823 823 1 ENSG00000234491.1 HNRNPA1P51 chr2 206419292 206420238 - processed_pseudogene KNOWN OTTHUMG00000154646.1 947 947 1 ENSG00000114948.11 ADAM23 chr2 206443539 206621130 + protein_coding KNOWN OTTHUMG00000132919.4 177592 6421 55 ENSG00000253368.3 TRNP1 chr1 26993707 27000898 + protein_coding KNOWN OTTHUMG00000004277.4 7192 1976 4 ENSG00000228577.1 AC010731.2 chr2 206606497 206609812 - antisense NOVEL OTTHUMG00000154728.1 3316 440 3 ENSG00000231653.1 AC010731.3 chr2 206640073 206641282 + antisense NOVEL OTTHUMG00000154730.1 1210 566 2 ENSG00000235118.6 AC010731.4 chr2 206642418 206649449 + lincRNA NOVEL OTTHUMG00000154723.2 7032 1403 7 ENSG00000232125.2 DYTN chr2 206651621 206718396 - protein_coding KNOWN OTTHUMG00000154729.1 66776 2140 16 ENSG00000213083.3 AC010731.6 chr2 206686517 206687362 - processed_pseudogene KNOWN OTTHUMG00000154731.1 846 846 1 ENSG00000207319.1 Y_RNA chr2 206701065 206701185 - misc_RNA NOVEL NA 121 121 1 ENSG00000138400.11 MDH1B chr2 206737763 206765547 - protein_coding KNOWN OTTHUMG00000132918.4 27785 3110 58 ENSG00000118246.12 FASTKD2 chr2 206765357 206792509 + protein_coding KNOWN OTTHUMG00000132917.2 27153 6079 52 ENSG00000263468.1 MIR3130-1 chr2 206783234 206783308 + miRNA KNOWN NA 75 75 1 ENSG00000260171.1 RP11-95H11.1 chr2 206821190 206822294 - lincRNA NOVEL OTTHUMG00000176286.1 1105 1105 1 ENSG00000158246.7 FAM46B chr1 27005020 27012836 - protein_coding KNOWN OTTHUMG00000004278.3 7817 2368 2 ENSG00000229321.1 AC008269.2 chr2 206866795 206868289 + lincRNA NOVEL OTTHUMG00000154733.1 1495 646 2 ENSG00000144410.4 CPO chr2 206939554 206969474 + protein_coding KNOWN OTTHUMG00000088987.2 29921 1209 9 ENSG00000118263.13 KLF7 chr2 207074137 207167267 - protein_coding KNOWN OTTHUMG00000132935.2 93131 9262 36 ENSG00000253008.2 MIR2355 chr2 207109987 207110073 - miRNA KNOWN NA 87 87 1 ENSG00000237892.1 KLF7-IT1 chr2 207120884 207122044 - sense_intronic NOVEL OTTHUMG00000154726.1 1161 655 2 ENSG00000277590.1 MIR7845 chr2 207166400 207166498 + miRNA KNOWN NA 99 99 1 ENSG00000224342.1 AC007879.1 chr2 207173634 207222790 + lincRNA NOVEL OTTHUMG00000154727.1 49157 554 5 ENSG00000234902.5 AC007879.2 chr2 207186717 207236066 - lincRNA NOVEL OTTHUMG00000154732.1 49350 1095 7 ENSG00000225916.1 AC007879.4 chr2 207226949 207228308 + lincRNA NOVEL OTTHUMG00000154724.1 1360 551 2 ENSG00000240440.1 AC007879.3 chr2 207235299 207237875 - lincRNA NOVEL OTTHUMG00000154725.1 2577 361 2 ENSG00000280403.1 FKSG62 chr1 27064991 27065365 - protein_coding KNOWN NA 375 375 1 ENSG00000229647.1 AC007879.7 chr2 207239650 207245887 + lincRNA NOVEL OTTHUMG00000154787.1 6238 1204 5 ENSG00000223725.5 AC007879.5 chr2 207239864 207529795 - antisense NOVEL OTTHUMG00000154795.2 289932 1284 13 ENSG00000225064.1 AC007879.6 chr2 207260445 207270690 + lincRNA NOVEL OTTHUMG00000154784.1 10246 523 3 ENSG00000221628.1 MIR1302-4 chr2 207269275 207269424 - miRNA KNOWN NA 150 150 1 ENSG00000118260.13 CREB1 chr2 207529737 207603431 + protein_coding KNOWN OTTHUMG00000132936.4 73695 9575 87 ENSG00000144401.13 METTL21A chr2 207580631 207625928 - protein_coding KNOWN OTTHUMG00000132934.4 45298 6798 48 ENSG00000223433.1 AC079767.3 chr2 207654781 207654951 + processed_pseudogene KNOWN OTTHUMG00000154789.1 171 171 1 ENSG00000224137.1 AC079767.4 chr2 207662375 207667024 + lincRNA NOVEL OTTHUMG00000154786.1 4650 492 2 ENSG00000199251.1 RNU6-664P chr2 207680533 207680639 - snRNA KNOWN NA 107 107 1 ENSG00000213082.3 PPP1R14BP2 chr2 207681590 207682033 + processed_pseudogene KNOWN OTTHUMG00000154793.1 444 444 1 ENSG00000090020.9 SLC9A1 chr1 27098815 27166981 - protein_coding KNOWN OTTHUMG00000004271.3 68167 5974 36 ENSG00000200764.1 Y_RNA chr2 207687960 207688059 + misc_RNA NOVEL NA 100 100 1 ENSG00000163249.8 CCNYL1 chr2 207711540 207761839 + protein_coding KNOWN OTTHUMG00000132946.2 50300 4707 46 ENSG00000272851.1 RP11-801F7.1 chr2 207753872 207754435 - antisense NOVEL OTTHUMG00000186306.1 564 564 1 ENSG00000264900.1 MIR4775 chr2 207754807 207754881 + miRNA KNOWN NA 75 75 1 ENSG00000163251.3 FZD5 chr2 207762586 207769563 - protein_coding KNOWN OTTHUMG00000154790.1 6978 6708 2 ENSG00000244567.1 AC096772.6 chr2 207821290 207822769 - lincRNA NOVEL OTTHUMG00000154782.1 1480 1262 2 ENSG00000178385.12 PLEKHM3 chr2 207828303 208025560 - protein_coding KNOWN OTTHUMG00000154781.1 197258 4656 23 ENSG00000225111.1 AC083900.1 chr2 207868582 207869915 - sense_intronic NOVEL OTTHUMG00000154794.1 1334 469 2 ENSG00000212246.1 RNU6-360P chr2 208019638 208019741 - snRNA KNOWN NA 104 104 1 ENSG00000185078.3 AC093698.1 chr2 208031383 208031953 - processed_pseudogene KNOWN OTTHUMG00000154785.1 571 571 1 ENSG00000229985.2 RP11-40H20.5 chr1 27176751 27177277 + processed_pseudogene KNOWN OTTHUMG00000005769.1 527 527 1 ENSG00000251941.1 RNA5SP116 chr2 208054161 208054258 - rRNA KNOWN NA 98 98 1 ENSG00000224839.1 AC093698.2 chr2 208057248 208057745 - processed_pseudogene KNOWN OTTHUMG00000154788.1 498 498 1 ENSG00000229150.1 CRYGEP chr2 208108233 208112511 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000154792.1 4279 528 4 ENSG00000118231.4 CRYGD chr2 208121607 208124501 - protein_coding KNOWN OTTHUMG00000132944.2 2895 619 3 ENSG00000163254.4 CRYGC chr2 208128137 208129830 - protein_coding KNOWN OTTHUMG00000132942.1 1694 629 3 ENSG00000224529.1 AC093698.4 chr2 208135394 208137697 - processed_pseudogene KNOWN OTTHUMG00000154791.1 2304 1078 2 ENSG00000182187.3 CRYGB chr2 208142573 208146168 - protein_coding KNOWN OTTHUMG00000132941.2 3596 641 3 ENSG00000168582.4 CRYGA chr2 208160740 208163576 - protein_coding KNOWN OTTHUMG00000154796.1 2837 609 3 ENSG00000188674.9 C2orf80 chr2 208165343 208190073 - protein_coding KNOWN OTTHUMG00000154751.4 24731 1435 42 ENSG00000233869.1 AC016697.1 chr2 208208135 208208984 + processed_pseudogene KNOWN OTTHUMG00000154639.1 850 850 1 ENSG00000214973.3 CHCHD3P3 chr1 27200834 27201473 - processed_pseudogene KNOWN OTTHUMG00000004279.1 640 640 1 ENSG00000228111.1 TPT1P2 chr2 208214724 208222625 - processed_pseudogene KNOWN OTTHUMG00000154803.1 7902 503 2 ENSG00000138413.12 IDH1 chr2 208236227 208266074 - protein_coding KNOWN OTTHUMG00000132943.13 29848 4721 55 ENSG00000231908.1 IDH1-AS1 chr2 208255247 208256181 + antisense NOVEL OTTHUMG00000154707.1 935 655 4 ENSG00000115020.15 PIKFYVE chr2 208266267 208358751 + protein_coding KNOWN OTTHUMG00000132945.5 92485 10832 134 ENSG00000228380.1 AC016697.2 chr2 208269343 208269957 - processed_pseudogene KNOWN OTTHUMG00000154704.1 615 615 1 ENSG00000144407.8 PTH2R chr2 208359714 208854503 + protein_coding KNOWN OTTHUMG00000132960.7 494790 4390 38 ENSG00000213081.3 AC012362.3 chr2 208360631 208361369 - processed_pseudogene KNOWN OTTHUMG00000154662.1 739 739 1 ENSG00000227430.1 AC019185.2 chr2 208466238 208466626 - processed_pseudogene KNOWN OTTHUMG00000154661.1 389 389 1 ENSG00000231896.1 AC019185.4 chr2 208469850 208540413 + sense_intronic NOVEL OTTHUMG00000155504.1 70564 520 3 ENSG00000232409.1 AC019185.3 chr2 208516908 208517230 + processed_pseudogene KNOWN OTTHUMG00000154663.1 323 323 1 ENSG00000198976.1 MIR429 chr1 1169005 1169087 + miRNA KNOWN NA 83 83 1 ENSG00000225159.1 NPM1P39 chr1 27206930 27207796 + processed_pseudogene KNOWN OTTHUMG00000004280.1 867 867 1 ENSG00000202164.1 RNA5SP117 chr2 208920547 208920664 - rRNA KNOWN NA 118 118 1 ENSG00000235864.1 HSPA8P6 chr2 209072597 209074148 - processed_pseudogene KNOWN OTTHUMG00000154705.1 1552 1552 1 ENSG00000276773.1 AC013409.1 chr2 209092541 209092629 - miRNA NOVEL NA 89 89 1 ENSG00000232799.1 CRYGFP chr2 209145241 209147687 + unprocessed_pseudogene KNOWN OTTHUMG00000154708.1 2447 633 2 ENSG00000240286.1 MEAF6P1 chr2 209178804 209182018 + processed_pseudogene KNOWN OTTHUMG00000154706.1 3215 327 2 ENSG00000229670.2 PKP4P1 chr2 209178966 209181123 + unprocessed_pseudogene KNOWN OTTHUMG00000155516.1 2158 2158 1 ENSG00000276683.1 AC016743.1 chr2 209299795 209299862 - miRNA NOVEL NA 68 68 1 ENSG00000078018.18 MAP2 chr2 209424058 209734118 + protein_coding KNOWN OTTHUMG00000132962.5 310061 11559 113 ENSG00000222317.1 RNA5SP118 chr2 209721913 209722021 - rRNA KNOWN NA 109 109 1 ENSG00000144406.17 UNC80 chr2 209771993 209999300 + protein_coding KNOWN OTTHUMG00000132963.10 227308 19258 207 ENSG00000225990.2 SNRPEP7 chr1 27211265 27211484 + processed_pseudogene KNOWN OTTHUMG00000004281.2 220 220 1 ENSG00000237194.1 SNAI1P1 chr2 209808804 209809580 + processed_pseudogene KNOWN OTTHUMG00000154657.1 777 777 1 ENSG00000197713.13 RPE chr2 210002565 210022259 + protein_coding KNOWN OTTHUMG00000154690.5 19695 3522 97 ENSG00000144445.14 KANSL1L chr2 210021423 210171383 - protein_coding KNOWN OTTHUMG00000154697.4 149961 8468 66 ENSG00000272807.1 RP11-260M2.1 chr2 210028417 210029156 + antisense NOVEL OTTHUMG00000186312.1 740 740 1 ENSG00000229127.1 AC007038.7 chr2 210030733 210064356 + antisense NOVEL OTTHUMG00000154698.1 33624 2199 4 ENSG00000231063.1 AC006994.1 chr2 210088226 210089064 + processed_pseudogene KNOWN OTTHUMG00000154718.2 839 839 1 ENSG00000231294.1 AC006994.2 chr2 210171518 210230383 + antisense NOVEL OTTHUMG00000154719.1 58866 506 3 ENSG00000115361.6 ACADL chr2 210187939 210225491 - protein_coding KNOWN OTTHUMG00000132989.2 37553 4383 19 ENSG00000279317.1 AC006994.3 chr2 210232692 210233976 + protein_coding KNOWN NA 1285 1285 1 ENSG00000199203.1 Y_RNA chr2 210265963 210266074 + misc_RNA NOVEL NA 112 112 1 ENSG00000224311.1 RP11-40H20.4 chr1 27229106 27234352 - antisense NOVEL OTTHUMG00000004413.2 5247 379 3 ENSG00000168530.14 MYL1 chr2 210290150 210315190 - protein_coding KNOWN OTTHUMG00000132992.2 25041 1342 26 ENSG00000234281.4 LANCL1-AS1 chr2 210324759 210469246 + antisense NOVEL OTTHUMG00000154735.1 144488 1667 14 ENSG00000115365.10 LANCL1 chr2 210431249 210477652 - protein_coding KNOWN OTTHUMG00000132991.5 46404 5254 65 ENSG00000021826.13 CPS1 chr2 210477682 210679107 + protein_coding KNOWN OTTHUMG00000132994.9 201426 10444 152 ENSG00000280837.1 CPS1-IT1 chr2 210617571 210619876 + sense_intronic KNOWN OTTHUMG00000189581.1 2306 2306 1 ENSG00000271074.1 RP11-212J19.1 chr2 211104934 211105732 + processed_pseudogene KNOWN OTTHUMG00000184258.1 799 799 1 ENSG00000231017.1 AC013404.1 chr2 211298941 211299189 - processed_pseudogene KNOWN OTTHUMG00000154747.1 249 249 1 ENSG00000178568.12 ERBB4 chr2 211375717 212538841 - protein_coding KNOWN OTTHUMG00000133012.4 1163125 13023 136 ENSG00000199585.1 RNA5SP119 chr2 211535653 211535769 + rRNA KNOWN NA 117 117 1 ENSG00000232631.1 MTND2P23 chr2 211777206 211777856 + processed_pseudogene KNOWN OTTHUMG00000154766.1 651 651 1 ENSG00000142784.14 WDTC1 chr1 27234516 27308633 + protein_coding KNOWN OTTHUMG00000004273.6 74118 6024 61 ENSG00000277155.1 AC105921.1 chr2 211778075 211778140 + miRNA NOVEL NA 66 66 1 ENSG00000236007.1 AC105921.5 chr2 211778273 211779763 + processed_pseudogene KNOWN OTTHUMG00000154767.3 1491 1491 1 ENSG00000221782.1 MIR548F2 chr2 212426263 212426360 - miRNA KNOWN NA 98 98 1 ENSG00000273118.1 AC079610.1 chr2 212581357 213021545 - sense_overlapping NOVEL OTTHUMG00000154820.1 440189 433 5 ENSG00000221388.1 AC093865.1 chr2 212763570 212763675 - miRNA NOVEL NA 106 106 1 ENSG00000234308.2 AC093381.2 chr2 212795331 212819264 + lincRNA NOVEL OTTHUMG00000154769.2 23934 1124 7 ENSG00000231254.2 PCED1CP chr2 212832161 212832945 + processed_pseudogene KNOWN OTTHUMG00000154768.1 785 785 1 ENSG00000223373.1 AC108066.1 chr2 212911003 212919809 + lincRNA NOVEL OTTHUMG00000154822.1 8807 596 3 ENSG00000266354.1 MIR4776-1 chr2 212926257 212926336 + miRNA KNOWN NA 80 80 1 ENSG00000030419.15 IKZF2 chr2 212999691 213152427 - protein_coding KNOWN OTTHUMG00000133005.6 152737 12240 97 ENSG00000252098.1 Y_RNA chr1 27255464 27255567 - misc_RNA NOVEL NA 104 104 1 ENSG00000270659.1 RP11-105N14.1 chr2 213152970 213153659 + lincRNA NOVEL OTTHUMG00000185233.1 690 690 1 ENSG00000236193.3 RP11-105N14.3 chr2 213155806 213167712 - lincRNA NOVEL OTTHUMG00000186255.1 11907 717 2 ENSG00000272519.1 RP11-105N14.2 chr2 213266995 213276152 - lincRNA NOVEL OTTHUMG00000185531.1 9158 147 2 ENSG00000196096.3 AC079610.2 chr2 213276552 213284205 - lincRNA NOVEL OTTHUMG00000154847.1 7654 1727 3 ENSG00000144451.17 SPAG16 chr2 213284379 214410501 + protein_coding KNOWN OTTHUMG00000133015.8 1126123 8257 110 ENSG00000265734.1 MIR4438 chr2 213758067 213758159 + miRNA KNOWN NA 93 93 1 ENSG00000275977.1 AC008169.1 chr2 214042312 214042417 + miRNA NOVEL NA 106 106 1 ENSG00000197585.8 AC107218.3 chr2 214250040 214684246 - antisense NOVEL OTTHUMG00000154823.2 434207 727 9 ENSG00000213917.2 RPL5P8 chr2 214280638 214281452 - processed_pseudogene KNOWN OTTHUMG00000154848.1 815 815 1 ENSG00000174453.8 VWC2L chr2 214411065 214578959 + protein_coding KNOWN OTTHUMG00000154811.2 167895 5230 9 ENSG00000243659.1 RP11-4K3__A.3 chr1 27311240 27311838 + processed_pseudogene KNOWN OTTHUMG00000004409.1 599 282 2 ENSG00000224257.1 VWC2L-IT1 chr2 214510196 214536890 + sense_intronic NOVEL OTTHUMG00000154819.1 26695 467 4 ENSG00000177261.8 ENSAP3 chr2 214697727 214698059 + processed_pseudogene KNOWN OTTHUMG00000154772.2 333 333 1 ENSG00000138376.9 BARD1 chr2 214725646 214809711 - protein_coding KNOWN OTTHUMG00000133016.4 84066 6067 80 ENSG00000229267.2 AC072062.1 chr2 214810229 214963274 + antisense NOVEL OTTHUMG00000154799.2 153046 2108 6 ENSG00000207274.1 SNORA70 chr2 214846947 214847081 + snoRNA NOVEL NA 135 135 1 ENSG00000230076.1 AC016708.2 chr2 214847128 214847445 + processed_pseudogene KNOWN OTTHUMG00000154802.1 318 318 1 ENSG00000144452.13 ABCA12 chr2 214931542 215138428 - protein_coding KNOWN OTTHUMG00000154801.3 206887 9416 101 ENSG00000227769.6 AC072062.3 chr2 215004782 215085488 + antisense NOVEL OTTHUMG00000154798.5 80707 3813 57 ENSG00000237571.1 AC073284.4 chr2 215274992 215277947 + lincRNA NOVEL OTTHUMG00000154818.1 2956 404 3 ENSG00000138363.13 ATIC chr2 215311817 215349773 + protein_coding KNOWN OTTHUMG00000133023.7 37957 3928 99 ENSG00000186501.13 TMEM222 chr1 27322145 27336400 + protein_coding KNOWN OTTHUMG00000004410.6 14256 4476 61 ENSG00000115414.17 FN1 chr2 215360440 215436172 - protein_coding KNOWN OTTHUMG00000133054.5 75733 17315 548 ENSG00000230695.1 AC012462.1 chr2 215436253 215436992 + antisense NOVEL OTTHUMG00000154840.1 740 131 2 ENSG00000225166.1 AC012462.2 chr2 215453707 215463871 + lincRNA NOVEL OTTHUMG00000154835.2 10165 825 4 ENSG00000228618.1 AC012462.3 chr2 215476667 215480248 + lincRNA NOVEL OTTHUMG00000155685.1 3582 391 2 ENSG00000234938.2 AC012668.1 chr2 215530447 215545526 - lincRNA NOVEL OTTHUMG00000154836.2 15080 503 5 ENSG00000237525.5 AC012668.2 chr2 215533133 215713895 + lincRNA NOVEL OTTHUMG00000154833.2 180763 2028 15 ENSG00000227981.2 AC012668.3 chr2 215579407 215582635 - lincRNA NOVEL OTTHUMG00000154832.2 3229 228 2 ENSG00000235770.4 LINC00607 chr2 215611563 215843722 - lincRNA NOVEL OTTHUMG00000154834.1 232160 5628 36 ENSG00000230838.1 AC093850.2 chr2 215718043 215719424 + lincRNA NOVEL OTTHUMG00000154838.1 1382 648 2 ENSG00000216721.3 AC093850.1 chr2 215804731 215804981 - processed_pseudogene KNOWN OTTHUMG00000154839.1 251 251 1 ENSG00000206888.1 RNU6-48P chr1 27325219 27325325 + snRNA KNOWN NA 107 107 1 ENSG00000227824.1 AC122136.2 chr2 215869923 215870518 + lincRNA NOVEL OTTHUMG00000154837.1 596 478 2 ENSG00000212055.1 AC122136.1 chr2 215878833 215878919 - miRNA NOVEL NA 87 87 1 ENSG00000226276.1 AC093382.1 chr2 215939308 215941719 - lincRNA NOVEL OTTHUMG00000154827.1 2412 379 2 ENSG00000118242.14 MREG chr2 215942805 216034096 - protein_coding KNOWN OTTHUMG00000154828.1 91292 3056 25 ENSG00000115425.12 PECR chr2 215996329 216082955 - protein_coding KNOWN OTTHUMG00000154825.2 86627 3182 44 ENSG00000163449.9 TMEM169 chr2 216081866 216102783 + protein_coding KNOWN OTTHUMG00000133053.2 20918 3628 20 ENSG00000079246.14 XRCC5 chr2 216107464 216206303 + protein_coding KNOWN OTTHUMG00000133059.4 98840 5463 90 ENSG00000232970.1 POLHP1 chr2 216156342 216156811 - processed_pseudogene KNOWN OTTHUMG00000154829.1 470 470 1 ENSG00000236478.2 AC012513.4 chr2 216174896 216176032 - processed_pseudogene KNOWN OTTHUMG00000154826.2 1137 1137 1 ENSG00000279348.1 RP11-566E18.1 chr2 216211404 216213519 + TEC KNOWN OTTHUMG00000176288.1 2116 2116 1 ENSG00000241547.1 RP11-4K3__A.5 chr1 27325329 27325796 + processed_pseudogene KNOWN OTTHUMG00000004411.1 468 468 1 ENSG00000260804.3 PKI55 chr2 216217045 216220192 + lincRNA NOVEL OTTHUMG00000176293.1 3148 3148 1 ENSG00000144583.4 MARCH4 chr2 216257865 216372027 - protein_coding KNOWN OTTHUMG00000154824.2 114163 4447 4 ENSG00000231092.1 AC012513.6 chr2 216259595 216266130 + antisense NOVEL OTTHUMG00000154842.1 6536 784 2 ENSG00000233581.1 AC069155.1 chr2 216303325 216321737 + antisense NOVEL OTTHUMG00000154841.1 18413 575 3 ENSG00000207303.1 Y_RNA chr2 216351403 216351504 + misc_RNA NOVEL NA 102 102 1 ENSG00000235042.1 AC098820.2 chr2 216385288 216412696 - antisense NOVEL OTTHUMG00000154843.1 27409 666 5 ENSG00000138375.11 SMARCAL1 chr2 216412414 216483053 + protein_coding KNOWN OTTHUMG00000133055.2 70640 5092 85 ENSG00000232485.2 AC098820.3 chr2 216479030 216498761 - processed_transcript NOVEL OTTHUMG00000154850.1 19732 1435 7 ENSG00000241520.1 AC098820.4 chr2 216483032 216487196 - antisense NOVEL OTTHUMG00000154849.1 4165 976 2 ENSG00000197756.8 RPL37A chr2 216498189 216579180 + protein_coding KNOWN OTTHUMG00000133052.5 80992 6841 46 ENSG00000281023.1 FO393419.1 chr1 27325470 27325553 + miRNA NOVEL NA 84 84 1 ENSG00000224391.1 LINC01280 chr2 216590426 216606938 - antisense NOVEL OTTHUMG00000155340.1 16513 1184 4 ENSG00000225794.1 AC073321.4 chr2 216604771 216611202 + lincRNA NOVEL OTTHUMG00000155344.2 6432 654 2 ENSG00000235444.2 PSMB3P2 chr2 216610342 216610959 - processed_pseudogene KNOWN OTTHUMG00000155343.1 618 618 1 ENSG00000115457.8 IGFBP2 chr2 216632828 216664436 + protein_coding KNOWN OTTHUMG00000155341.1 31609 4767 16 ENSG00000115461.4 IGFBP5 chr2 216672105 216695525 - protein_coding KNOWN OTTHUMG00000133058.2 23421 6442 8 ENSG00000236886.2 AC007563.5 chr2 216694464 216994079 + antisense NOVEL OTTHUMG00000155309.3 299616 904 7 ENSG00000237930.1 AC007563.4 chr2 216785774 216786144 - processed_pseudogene KNOWN OTTHUMG00000155308.1 371 371 1 ENSG00000222832.1 RNA5SP120 chr2 216793489 216793600 - rRNA KNOWN NA 112 112 1 ENSG00000229352.1 AC007563.3 chr2 216799608 216805335 + lincRNA NOVEL OTTHUMG00000155311.1 5728 689 2 ENSG00000234588.1 FABP5P14 chr2 216805737 216806129 - processed_pseudogene KNOWN OTTHUMG00000155314.1 393 393 1 ENSG00000186092.4 OR4F5 chr1 69091 70008 + protein_coding KNOWN OTTHUMG00000001094.1 918 918 1 ENSG00000272141.1 RP11-465B22.8 chr1 1169357 1170343 + lincRNA NOVEL OTTHUMG00000185583.1 987 987 1 ENSG00000142765.16 SYTL1 chr1 27342020 27353937 + protein_coding KNOWN OTTHUMG00000005770.10 11918 5584 99 ENSG00000231597.1 AC007557.4 chr2 216854389 216855132 - antisense NOVEL OTTHUMG00000155312.1 744 583 2 ENSG00000118245.2 TNP1 chr2 216859458 216860064 - protein_coding KNOWN OTTHUMG00000133057.1 607 407 2 ENSG00000278951.1 AC007557.5 chr2 216863059 216865281 + protein_coding KNOWN NA 2223 78 3 ENSG00000237479.1 AC007557.2 chr2 216866332 216867813 - antisense NOVEL OTTHUMG00000155316.1 1482 430 2 ENSG00000227021.1 AC007557.3 chr2 216868012 216869156 + lincRNA NOVEL OTTHUMG00000155315.1 1145 541 2 ENSG00000236295.1 AC007563.1 chr2 216870441 216873932 - lincRNA NOVEL OTTHUMG00000155313.1 3492 3135 2 ENSG00000223874.1 AC007557.1 chr2 216870772 216871639 + lincRNA NOVEL OTTHUMG00000155310.1 868 393 2 ENSG00000259855.1 RP11-574O16.1 chr2 216995906 216996490 + lincRNA NOVEL OTTHUMG00000176299.1 585 585 1 ENSG00000251849.1 AC010887.1 chr2 217176498 217176582 + miRNA NOVEL NA 85 85 1 ENSG00000251982.1 RN7SKP43 chr2 217251556 217251875 + misc_RNA KNOWN NA 320 320 1 ENSG00000142733.13 MAP3K6 chr1 27355184 27366892 - protein_coding KNOWN OTTHUMG00000004631.5 11709 4951 119 ENSG00000233143.1 DIRC3-AS1 chr2 217282739 217336120 + lincRNA NOVEL OTTHUMG00000155286.1 53382 557 5 ENSG00000278004.1 Pinc chr2 217283370 217283523 + misc_RNA NOVEL NA 154 154 1 ENSG00000231672.5 DIRC3 chr2 217284019 217756593 - protein_coding KNOWN OTTHUMG00000155287.2 472575 4665 33 ENSG00000224414.1 AC010886.2 chr2 217693895 217696763 + processed_pseudogene KNOWN OTTHUMG00000155288.1 2869 2869 1 ENSG00000231035.1 RPL7L1P9 chr2 217760547 217761291 - processed_pseudogene KNOWN OTTHUMG00000155261.1 745 745 1 ENSG00000079308.15 TNS1 chr2 217799789 218002995 - protein_coding KNOWN OTTHUMG00000133056.5 203207 15595 273 ENSG00000275458.1 MIR6809 chr2 217900513 217900628 - miRNA KNOWN NA 116 116 1 ENSG00000223923.1 AC010136.2 chr2 217978707 217992615 + antisense NOVEL OTTHUMG00000155260.1 13909 568 4 ENSG00000188282.11 RUFY4 chr2 218034960 218090581 + protein_coding KNOWN OTTHUMG00000155235.3 55622 4357 66 ENSG00000229754.1 CXCR2P1 chr2 218059155 218065729 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155244.1 6575 2503 3 ENSG00000142748.11 FCN3 chr1 27369112 27374824 - protein_coding KNOWN OTTHUMG00000005722.2 5713 2167 20 ENSG00000180871.6 CXCR2 chr2 218125289 218137253 + protein_coding KNOWN OTTHUMG00000133107.2 11965 3231 23 ENSG00000163464.7 CXCR1 chr2 218162845 218166995 - protein_coding KNOWN OTTHUMG00000133108.2 4151 2488 2 ENSG00000277115.1 AC097483.1 chr2 218179386 218179453 + miRNA NOVEL NA 68 68 1 ENSG00000224159.1 HMGB1P9 chr2 218200434 218201388 + processed_pseudogene KNOWN OTTHUMG00000155227.1 955 646 2 ENSG00000163466.14 ARPC2 chr2 218217094 218254356 + protein_coding KNOWN OTTHUMG00000133618.3 37263 6562 102 ENSG00000261338.2 RP11-378A13.1 chr2 218255319 218257366 + sense_overlapping NOVEL OTTHUMG00000176328.2 2048 2048 1 ENSG00000179921.13 GPBAR1 chr2 218259496 218263859 + protein_coding KNOWN OTTHUMG00000155203.3 4364 2692 8 ENSG00000127837.8 AAMP chr2 218264123 218270257 - protein_coding KNOWN OTTHUMG00000155202.2 6135 3140 71 ENSG00000127838.12 PNKD chr2 218270392 218346793 + protein_coding KNOWN OTTHUMG00000133110.2 76402 5184 39 ENSG00000135926.11 TMBIM1 chr2 218274192 218292586 - protein_coding KNOWN OTTHUMG00000133105.9 18395 5098 150 ENSG00000174950.9 CD164L2 chr1 27379176 27383380 - protein_coding KNOWN OTTHUMG00000003395.4 4205 2041 14 ENSG00000274203.1 MIR6513 chr2 218280125 218280188 - miRNA KNOWN NA 64 64 1 ENSG00000237281.1 CATIP-AS2 chr2 218326889 218357966 - antisense NOVEL OTTHUMG00000155145.1 31078 535 4 ENSG00000278524.1 MIR6810 chr2 218341911 218341980 + miRNA KNOWN NA 70 70 1 ENSG00000230580.1 AC021016.7 chr2 218354075 218354572 + processed_pseudogene KNOWN OTTHUMG00000155144.1 498 498 1 ENSG00000158428.3 CATIP chr2 218356856 218368099 + protein_coding KNOWN OTTHUMG00000133106.2 11244 3821 22 ENSG00000225062.1 CATIP-AS1 chr2 218366665 218367835 - processed_transcript NOVEL OTTHUMG00000155067.1 1171 775 5 ENSG00000018280.15 SLC11A1 chr2 218382029 218396894 + protein_coding KNOWN OTTHUMG00000086747.3 14866 8676 128 ENSG00000144579.6 CTDSP1 chr2 218398256 218405941 + protein_coding KNOWN OTTHUMG00000133109.2 7686 4727 85 ENSG00000273361.1 RP11-378A13.2 chr2 218398743 218399219 - antisense NOVEL OTTHUMG00000186313.1 477 477 1 ENSG00000199121.3 MIR26B chr2 218402637 218402746 + miRNA KNOWN NA 110 110 1 ENSG00000231207.1 RP1-144C9.2 chr1 27389468 27390145 + processed_pseudogene KNOWN OTTHUMG00000003396.1 678 355 2 ENSG00000127831.9 VIL1 chr2 218419092 218453295 + protein_coding KNOWN OTTHUMG00000133112.4 34204 6920 55 ENSG00000135913.9 USP37 chr2 218450251 218568361 - protein_coding KNOWN OTTHUMG00000133113.4 118111 9290 138 ENSG00000222714.1 RN7SKP38 chr2 218500729 218501037 - misc_RNA KNOWN NA 309 309 1 ENSG00000144580.12 RQCD1 chr2 218568580 218597080 + protein_coding KNOWN OTTHUMG00000154750.2 28501 5289 50 ENSG00000207393.1 RNU6-136P chr2 218589214 218589320 - snRNA KNOWN NA 107 107 1 ENSG00000115556.12 PLCD4 chr2 218607765 218637184 + protein_coding KNOWN OTTHUMG00000154743.2 29420 5867 128 ENSG00000273466.1 RP11-548H3.1 chr2 218633256 218634014 - antisense NOVEL OTTHUMG00000186314.1 759 759 1 ENSG00000115568.14 ZNF142 chr2 218637916 218659655 - protein_coding KNOWN OTTHUMG00000154736.1 21740 6994 50 ENSG00000074582.11 BCS1L chr2 218658764 218663443 + protein_coding KNOWN OTTHUMG00000133114.2 4680 3379 110 ENSG00000163481.6 RNF25 chr2 218663864 218672411 - protein_coding KNOWN OTTHUMG00000133077.2 8548 2323 41 ENSG00000181773.6 GPR3 chr1 27392644 27395814 + protein_coding KNOWN OTTHUMG00000003397.2 3171 2115 2 ENSG00000163482.10 STK36 chr2 218672026 218702716 + protein_coding KNOWN OTTHUMG00000133079.2 30691 6458 143 ENSG00000135912.9 TTLL4 chr2 218710845 218755416 + protein_coding KNOWN OTTHUMG00000133081.2 44572 7685 158 ENSG00000135929.7 CYP27A1 chr2 218781749 218815293 + protein_coding KNOWN OTTHUMG00000048238.5 33545 2983 29 ENSG00000272555.1 RP11-459I19.1 chr2 218818690 218819144 + lincRNA NOVEL OTTHUMG00000186315.1 455 455 1 ENSG00000115592.10 PRKAG3 chr2 218822383 218832086 - protein_coding KNOWN OTTHUMG00000133078.3 9704 3334 65 ENSG00000232625.1 AC009974.11 chr2 218841599 218842065 + processed_pseudogene KNOWN OTTHUMG00000154686.1 467 467 1 ENSG00000115596.3 WNT6 chr2 218859821 218874233 + protein_coding KNOWN OTTHUMG00000133082.2 14413 1703 6 ENSG00000135925.7 WNT10A chr2 218880363 218899581 + protein_coding KNOWN OTTHUMG00000133085.2 19219 3412 10 ENSG00000228135.1 LINC01494 chr2 218900811 218930636 - antisense NOVEL OTTHUMG00000154664.1 29826 1011 5 ENSG00000200029.1 RNU6-642P chr2 218916184 218916287 - snRNA KNOWN NA 104 104 1 ENSG00000158195.9 WASF2 chr1 27404226 27490158 - protein_coding KNOWN OTTHUMG00000003393.3 85933 5676 17 ENSG00000235024.1 AC097468.7 chr2 218944629 218961903 - antisense NOVEL OTTHUMG00000154666.1 17275 553 2 ENSG00000224928.2 KRT8P30 chr2 218953401 218954050 - processed_pseudogene KNOWN OTTHUMG00000154667.1 650 650 1 ENSG00000171450.5 CDK5R2 chr2 218959655 218962162 + protein_coding KNOWN OTTHUMG00000133083.2 2508 2508 1 ENSG00000236445.4 LINC00608 chr2 218975393 218989940 + antisense NOVEL OTTHUMG00000154665.5 14548 4023 17 ENSG00000163497.2 FEV chr2 218981087 218985657 - protein_coding KNOWN OTTHUMG00000133080.2 4571 2049 5 ENSG00000163499.10 CRYBA2 chr2 218990189 218993421 - protein_coding KNOWN OTTHUMG00000133084.2 3233 1454 20 ENSG00000198973.3 MIR375 chr2 219001628 219001739 - miRNA KNOWN NA 112 112 1 ENSG00000224090.1 AC097468.4 chr2 219002215 219015721 + antisense NOVEL OTTHUMG00000154630.1 13507 1992 3 ENSG00000181378.12 CCDC108 chr2 219002846 219041527 - protein_coding KNOWN OTTHUMG00000133013.7 38682 10519 145 ENSG00000163501.6 IHH chr2 219054420 219060467 - protein_coding KNOWN OTTHUMG00000154631.2 6048 2023 3 ENSG00000241169.1 RP4-752I6.1 chr1 27457198 27459582 + lincRNA NOVEL OTTHUMG00000003394.2 2385 428 2 ENSG00000264755.1 MIR3131 chr2 219058688 219058750 - miRNA KNOWN NA 63 63 1 ENSG00000272644.1 RP11-33O4.1 chr2 219069354 219069809 - lincRNA NOVEL OTTHUMG00000186316.1 456 456 1 ENSG00000187736.11 NHEJ1 chr2 219075317 219160865 - protein_coding KNOWN OTTHUMG00000133127.2 85549 3109 56 ENSG00000280537.1 RP11-33O4.2 chr2 219075329 219170827 - protein_coding NOVEL OTTHUMG00000189759.1 95499 4650 34 ENSG00000240317.3 RN7SL764P chr2 219102434 219102719 + misc_RNA KNOWN NA 286 286 1 ENSG00000213901.9 SLC23A3 chr2 219161465 219170095 - protein_coding KNOWN OTTHUMG00000154616.8 8631 3601 69 ENSG00000115649.14 CNPPD1 chr2 219171897 219178106 - protein_coding KNOWN OTTHUMG00000133132.2 6210 2760 33 ENSG00000144567.9 FAM134A chr2 219176225 219185479 + protein_coding KNOWN OTTHUMG00000154577.2 9255 5689 55 ENSG00000158552.11 ZFAND2B chr2 219195237 219209651 + protein_coding KNOWN OTTHUMG00000133135.15 14415 3396 127 ENSG00000115657.11 ABCB6 chr2 219209768 219218990 - protein_coding KNOWN OTTHUMG00000133131.3 9223 5205 96 ENSG00000237429.1 RP1-159A19.4 chr1 27525805 27530561 + antisense NOVEL OTTHUMG00000003517.1 4757 283 2 ENSG00000198925.9 ATG9A chr2 219209772 219229717 - protein_coding KNOWN OTTHUMG00000154557.17 19946 8136 192 ENSG00000221344.1 AC068946.1 chr2 219224023 219224105 - miRNA NOVEL NA 83 83 1 ENSG00000163516.12 ANKZF1 chr2 219229757 219236669 + protein_coding KNOWN OTTHUMG00000154533.2 6913 6119 143 ENSG00000163521.14 GLB1L chr2 219236606 219245478 - protein_coding KNOWN OTTHUMG00000133133.2 8873 3411 91 ENSG00000115661.12 STK16 chr2 219245455 219250337 + protein_coding KNOWN OTTHUMG00000154520.2 4883 4368 70 ENSG00000127824.12 TUBA4A chr2 219249711 219278170 - protein_coding KNOWN OTTHUMG00000133126.4 28460 4079 33 ENSG00000243910.6 TUBA4B chr2 219253243 219272188 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000154516.2 18946 1918 15 ENSG00000135924.14 DNAJB2 chr2 219279267 219286900 + protein_coding KNOWN OTTHUMG00000133134.21 7634 5886 95 ENSG00000054356.12 PTPRN chr2 219289623 219309648 - protein_coding KNOWN OTTHUMG00000133129.3 20026 8261 154 ENSG00000207647.1 MIR153-1 chr2 219294111 219294200 - miRNA KNOWN NA 90 90 1 ENSG00000126705.12 AHDC1 chr1 27534035 27604431 - protein_coding KNOWN OTTHUMG00000003398.4 70397 7157 23 ENSG00000230432.1 AC114803.3 chr2 219299002 219304130 + antisense NOVEL OTTHUMG00000154505.1 5129 311 3 ENSG00000182698.10 RESP18 chr2 219327409 219333177 - protein_coding KNOWN OTTHUMG00000150223.1 5769 1140 18 ENSG00000232789.1 AC053503.2 chr2 219358870 219358983 - unprocessed_pseudogene KNOWN OTTHUMG00000058920.1 114 114 1 ENSG00000123992.17 DNPEP chr2 219373546 219400022 - protein_coding KNOWN OTTHUMG00000058919.5 26477 4734 170 ENSG00000229525.1 AC053503.4 chr2 219388496 219403633 + antisense NOVEL OTTHUMG00000058921.1 15138 1598 2 ENSG00000175084.10 DES chr2 219418377 219426739 + protein_coding KNOWN OTTHUMG00000058924.2 8363 2464 23 ENSG00000234638.1 AC053503.6 chr2 219425071 219426184 - antisense NOVEL OTTHUMG00000058923.1 1114 224 2 ENSG00000280323.1 AC053503.12 chr2 219427477 219429319 + TEC KNOWN OTTHUMG00000150115.1 1843 1843 1 ENSG00000072195.13 SPEG chr2 219434846 219498287 + protein_coding KNOWN OTTHUMG00000058925.9 63442 17910 196 ENSG00000227432.1 AC053503.11 chr2 219482073 219516877 - antisense NOVEL OTTHUMG00000133672.1 34805 519 2 ENSG00000205231.1 TTLL10-AS1 chr1 1173056 1179555 - antisense NOVEL OTTHUMG00000000850.1 6500 3532 2 ENSG00000000938.11 FGR chr1 27612064 27635277 - protein_coding KNOWN OTTHUMG00000003516.1 23214 3474 65 ENSG00000268603.1 RP11-316O14.1 chr2 219497611 219498246 - antisense NOVEL OTTHUMG00000183007.1 636 636 1 ENSG00000144591.16 GMPPA chr2 219498867 219506988 + protein_coding KNOWN OTTHUMG00000058922.19 8122 5331 120 ENSG00000072182.11 ASIC4 chr2 219514170 219538772 + protein_coding KNOWN OTTHUMG00000058928.2 24603 5250 35 ENSG00000123989.12 CHPF chr2 219538947 219543787 - protein_coding KNOWN OTTHUMG00000058929.2 4841 3354 10 ENSG00000188760.9 TMEM198 chr2 219543663 219550595 + protein_coding KNOWN OTTHUMG00000059156.2 6933 2578 17 ENSG00000268896.1 RP11-256I23.1 chr2 219547211 219547658 - antisense NOVEL OTTHUMG00000183008.1 448 448 1 ENSG00000265252.1 MIR3132 chr2 219549073 219549147 - miRNA KNOWN NA 75 75 1 ENSG00000124006.13 OBSL1 chr2 219550729 219571859 - protein_coding KNOWN OTTHUMG00000059157.12 21131 9611 115 ENSG00000269068.1 RP11-256I23.2 chr2 219559083 219559626 + antisense NOVEL OTTHUMG00000183009.1 544 544 1 ENSG00000123999.4 INHA chr2 219569162 219575713 + protein_coding KNOWN OTTHUMG00000059237.1 6552 1753 4 ENSG00000235912.1 RP1-159A19.3 chr1 27649419 27649610 + processed_pseudogene KNOWN OTTHUMG00000003515.1 192 192 1 ENSG00000222678.1 RN7SKP213 chr2 219590687 219590984 - misc_RNA KNOWN NA 298 298 1 ENSG00000144589.19 STK11IP chr2 219597860 219616451 + protein_coding KNOWN OTTHUMG00000059239.7 18592 5694 119 ENSG00000228973.1 AC009955.8 chr2 219625059 219626693 - antisense NOVEL OTTHUMG00000059236.2 1635 271 2 ENSG00000114923.15 SLC4A3 chr2 219627327 219641980 + protein_coding KNOWN OTTHUMG00000059238.20 14654 5091 138 ENSG00000267919.1 RP11-256I23.3 chr2 219645090 219645631 + lincRNA NOVEL OTTHUMG00000183010.1 542 542 1 ENSG00000231802.1 AC009502.1 chr2 219684030 219684795 - processed_pseudogene KNOWN OTTHUMG00000059374.1 766 766 1 ENSG00000227308.2 AC009502.4 chr2 219685381 219737937 + lincRNA NOVEL OTTHUMG00000150131.2 52557 2951 7 ENSG00000223903.1 RPL23P4 chr2 219697799 219698214 + processed_pseudogene KNOWN OTTHUMG00000059375.1 416 416 1 ENSG00000228909.1 AC008281.1 chr2 219904051 219904889 - lincRNA NOVEL OTTHUMG00000059377.2 839 613 3 ENSG00000266518.1 MIR4268 chr2 219906502 219906565 - miRNA KNOWN NA 64 64 1 ENSG00000233975.1 RP11-288L9.1 chr1 27660328 27662722 - lincRNA NOVEL OTTHUMG00000003519.1 2395 441 2 ENSG00000225911.1 AC009310.1 chr2 220048822 220049272 - processed_pseudogene KNOWN OTTHUMG00000153864.1 451 451 1 ENSG00000239498.1 AC114765.1 chr2 220105656 220450778 + lincRNA NOVEL OTTHUMG00000153855.1 345123 754 4 ENSG00000235337.1 AC114765.2 chr2 220127546 220212491 + lincRNA NOVEL OTTHUMG00000153854.1 84946 347 3 ENSG00000221199.1 AC114765.3 chr2 220191878 220191956 + miRNA NOVEL NA 79 79 1 ENSG00000236451.2 AC067956.1 chr2 220450679 220704566 + lincRNA NOVEL OTTHUMG00000153857.1 253888 2062 5 ENSG00000222096.1 AC019051.1 chr2 220476983 220477092 - miRNA NOVEL NA 110 110 1 ENSG00000224819.1 AC093843.1 chr2 220791078 220797893 + lincRNA NOVEL OTTHUMG00000153856.1 6816 512 2 ENSG00000281701.1 AC093160.1 chr2 221120764 221120839 + miRNA NOVEL NA 76 76 1 ENSG00000232089.1 AC011233.2 chr2 221162771 221163053 + processed_pseudogene KNOWN OTTHUMG00000153851.1 283 283 1 ENSG00000116106.10 EPHA4 chr2 221418027 221574202 - protein_coding KNOWN OTTHUMG00000133142.5 156176 7554 84 ENSG00000126709.13 IFI6 chr1 27666061 27672218 - protein_coding KNOWN OTTHUMG00000003518.1 6158 865 15 ENSG00000221432.1 AC079834.2 chr2 221519564 221519657 - miRNA NOVEL NA 94 94 1 ENSG00000226726.1 TMEM256P2 chr2 221532668 221533008 + processed_pseudogene KNOWN OTTHUMG00000154498.1 341 341 1 ENSG00000272944.1 CTD-2308L22.1 chr2 221572506 221574454 + antisense NOVEL OTTHUMG00000186317.1 1949 1949 1 ENSG00000230406.2 AC079834.1 chr2 221592441 221592861 + processed_pseudogene KNOWN OTTHUMG00000153852.1 421 421 1 ENSG00000234446.2 AC068489.1 chr2 221637543 221641813 + lincRNA NOVEL OTTHUMG00000154090.2 4271 261 2 ENSG00000233868.1 AC009302.2 chr2 221944223 221944612 + processed_pseudogene KNOWN OTTHUMG00000153408.1 390 390 1 ENSG00000226666.1 HSPA9P1 chr2 221961737 221963765 + processed_pseudogene KNOWN OTTHUMG00000153407.1 2029 2029 1 ENSG00000226331.1 AC009302.4 chr2 222044525 222044994 - processed_pseudogene KNOWN OTTHUMG00000153405.2 470 470 1 ENSG00000135903.17 PAX3 chr2 222199888 222298996 - protein_coding KNOWN OTTHUMG00000133157.7 99109 4633 69 ENSG00000163081.2 CCDC140 chr2 222298147 222305217 + protein_coding KNOWN OTTHUMG00000133154.2 7071 1932 4 ENSG00000225886.2 RP11-288L9.4 chr1 27669468 27703063 + antisense NOVEL OTTHUMG00000042107.2 33596 1651 20 ENSG00000267034.1 RP11-384O8.1 chr2 222317242 222318653 - lincRNA NOVEL OTTHUMG00000180633.1 1412 1412 1 ENSG00000237732.8 AC010980.2 chr2 222318275 222352989 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000153406.3 34715 2567 17 ENSG00000200822.1 Y_RNA chr2 222404985 222405095 + misc_RNA NOVEL NA 111 111 1 ENSG00000163082.9 SGPP2 chr2 222424517 222560948 + protein_coding KNOWN OTTHUMG00000133156.2 136432 3336 5 ENSG00000228670.4 NANOGP2 chr2 222452400 222453126 - processed_pseudogene KNOWN OTTHUMG00000153388.4 727 727 1 ENSG00000202016.1 RNU6-619P chr2 222498291 222498398 + snRNA KNOWN NA 108 108 1 ENSG00000234285.1 GAPDHP49 chr2 222503883 222504843 - processed_pseudogene KNOWN OTTHUMG00000153391.1 961 961 1 ENSG00000261428.2 RP11-16P6.1 chr2 222566899 222569719 - antisense NOVEL OTTHUMG00000176330.2 2821 2821 1 ENSG00000116120.9 FARSB chr2 222570536 222656337 - protein_coding KNOWN OTTHUMG00000133155.2 85802 3369 17 ENSG00000124003.12 MOGAT1 chr2 222671786 222709930 + protein_coding KNOWN OTTHUMG00000153394.3 38145 1048 6 ENSG00000206767.1 RNU6-949P chr1 27675603 27675709 - snRNA KNOWN NA 107 107 1 ENSG00000233751.1 AC104772.1 chr2 222677677 222678289 - processed_pseudogene KNOWN OTTHUMG00000153393.1 613 613 1 ENSG00000203531.3 AC016712.1 chr2 222698623 222699484 - processed_pseudogene KNOWN OTTHUMG00000153387.1 862 862 1 ENSG00000235225.1 AC016712.2 chr2 222726457 222726834 + processed_pseudogene KNOWN OTTHUMG00000153392.1 378 378 1 ENSG00000264133.3 AC016712.3 chr2 222793093 222793180 - miRNA NOVEL NA 88 88 1 ENSG00000123983.12 ACSL3 chr2 222860934 222944639 + protein_coding KNOWN OTTHUMG00000133160.4 83706 7240 64 ENSG00000224121.1 ATG12P2 chr2 222904640 222905055 - processed_pseudogene KNOWN OTTHUMG00000153389.1 416 416 1 ENSG00000234193.1 AC097461.4 chr2 222917387 222919363 - antisense NOVEL OTTHUMG00000153390.1 1977 537 2 ENSG00000265621.1 AC013476.1 chr2 222932594 222932683 - miRNA NOVEL NA 90 90 1 ENSG00000278083.1 RP11-525G12.1 chr2 222945930 222946388 - processed_pseudogene KNOWN OTTHUMG00000187703.1 459 459 1 ENSG00000152049.6 KCNE4 chr2 223051814 223198399 + protein_coding KNOWN OTTHUMG00000133161.4 146586 4124 6 ENSG00000226662.2 CHMP1AP1 chr1 27686810 27687471 - processed_pseudogene KNOWN OTTHUMG00000003514.3 662 662 1 ENSG00000243125.3 RN7SL807P chr2 223248498 223248794 - misc_RNA KNOWN NA 297 297 1 ENSG00000233299.1 HIGD1AP4 chr2 223398267 223398546 - processed_pseudogene KNOWN OTTHUMG00000153379.1 280 280 1 ENSG00000281033.1 AC013448.3 chr2 223454265 223454402 - miRNA NOVEL NA 138 138 1 ENSG00000231189.1 AC013448.1 chr2 223498773 223504611 + lincRNA NOVEL OTTHUMG00000153378.1 5839 808 3 ENSG00000235610.1 AC013448.2 chr2 223505476 223510933 + lincRNA NOVEL OTTHUMG00000153377.1 5458 787 2 ENSG00000171951.4 SCG2 chr2 223596940 223602503 - protein_coding KNOWN OTTHUMG00000133166.2 5564 2719 7 ENSG00000226539.1 AC012512.1 chr2 223704621 223705338 + processed_pseudogene KNOWN OTTHUMG00000153371.1 718 718 1 ENSG00000152056.15 AP1S3 chr2 223751686 223838027 - protein_coding KNOWN OTTHUMG00000133165.5 86342 4284 36 ENSG00000085449.13 WDFY1 chr2 223855716 223945387 - protein_coding KNOWN OTTHUMG00000153370.1 89672 5516 30 ENSG00000281046.1 Metazoa_SRP chr2 223857154 223857425 - misc_RNA NOVEL NA 272 272 1 ENSG00000207095.1 RNU6-424P chr1 27693731 27693835 + snRNA KNOWN NA 105 105 1 ENSG00000135900.3 MRPL44 chr2 223957404 223967714 + protein_coding KNOWN OTTHUMG00000133164.2 10311 1748 4 ENSG00000228802.1 AC073641.2 chr2 223965701 223967706 - antisense NOVEL OTTHUMG00000153359.1 2006 429 2 ENSG00000135919.11 SERPINE2 chr2 223975112 224039319 - protein_coding KNOWN OTTHUMG00000133163.6 64208 8891 57 ENSG00000224826.1 AC019109.1 chr2 224169664 224171537 + processed_pseudogene KNOWN OTTHUMG00000153360.1 1874 1874 1 ENSG00000211987.2 AC104802.1 chr2 224239462 224239556 - miRNA NOVEL NA 95 95 1 ENSG00000228681.1 AC008072.1 chr2 224294930 224295753 + processed_pseudogene KNOWN OTTHUMG00000153358.1 824 824 1 ENSG00000124019.9 FAM124B chr2 224378698 224402085 - protein_coding KNOWN OTTHUMG00000133168.3 23388 3541 7 ENSG00000274629.1 RP11-92F20.1 chr2 224464682 224474500 + antisense NOVEL OTTHUMG00000188189.1 9819 1016 5 ENSG00000036257.11 CUL3 chr2 224470150 224585397 - protein_coding KNOWN OTTHUMG00000133167.4 115248 11505 109 ENSG00000228446.2 AC073052.1 chr2 224499387 224500100 - processed_pseudogene KNOWN OTTHUMG00000153417.2 714 714 1 ENSG00000009780.14 FAM76A chr1 27725979 27763122 + protein_coding KNOWN OTTHUMG00000003729.3 37144 4034 55 ENSG00000135905.17 DOCK10 chr2 224765090 225042445 - protein_coding KNOWN OTTHUMG00000153428.4 277356 11065 172 ENSG00000263828.1 MIR4439 chr2 225010461 225010540 - miRNA KNOWN NA 80 80 1 ENSG00000232784.1 AC067961.1 chr2 225399710 225400588 + lincRNA NOVEL OTTHUMG00000153466.1 879 574 2 ENSG00000144460.11 NYAP2 chr2 225400648 225654018 + protein_coding KNOWN OTTHUMG00000153450.1 253371 4828 6 ENSG00000228206.2 AC016717.1 chr2 225698254 225698539 + processed_pseudogene KNOWN OTTHUMG00000153467.2 286 286 1 ENSG00000273301.1 RP11-314B1.2 chr2 225698514 225703654 + lincRNA NOVEL OTTHUMG00000186319.1 5141 5141 1 ENSG00000279015.1 RP11-314B1.1 chr2 225761559 225762112 + TEC KNOWN OTTHUMG00000176331.1 554 554 1 ENSG00000230621.1 AC080002.1 chr2 225992981 225993197 - processed_pseudogene KNOWN OTTHUMG00000153470.1 217 217 1 ENSG00000235070.3 AC068138.1 chr2 226180044 226185371 - lincRNA NOVEL OTTHUMG00000153471.1 5328 1134 2 ENSG00000263363.1 MIR5702 chr2 226658710 226658793 - miRNA KNOWN NA 84 84 1 ENSG00000231344.1 RP3-426I6.2 chr1 27739091 27739439 + processed_pseudogene KNOWN OTTHUMG00000003731.1 349 349 1 ENSG00000169047.5 IRS1 chr2 226731317 226799759 - protein_coding KNOWN OTTHUMG00000133179.3 68443 9953 4 ENSG00000272622.1 RP11-395N3.2 chr2 226800146 226811029 + lincRNA NOVEL OTTHUMG00000186320.1 10884 584 4 ENSG00000261379.1 RP11-395N3.1 chr2 226804036 226805061 + sense_intronic NOVEL OTTHUMG00000176332.1 1026 1026 1 ENSG00000144468.15 RHBDD1 chr2 226835581 226999215 + protein_coding KNOWN OTTHUMG00000133178.4 163635 6926 57 ENSG00000212391.1 SNORA48 chr2 226968989 226969122 - snoRNA NOVEL NA 134 134 1 ENSG00000081052.11 COL4A4 chr2 227002711 227164113 - protein_coding KNOWN OTTHUMG00000149892.1 161403 9895 48 ENSG00000221608.1 AC079235.1 chr2 227124243 227124358 + miRNA NOVEL NA 116 116 1 ENSG00000169031.17 COL4A3 chr2 227164565 227314792 + protein_coding KNOWN OTTHUMG00000149891.3 150228 9124 75 ENSG00000236432.6 AC097662.2 chr2 227221052 227325201 - antisense NOVEL OTTHUMG00000149890.3 104150 3652 33 ENSG00000168958.18 MFF chr2 227325151 227357836 + protein_coding KNOWN OTTHUMG00000133180.3 32686 6150 146 ENSG00000162571.12 TTLL10 chr1 1173884 1197935 + protein_coding KNOWN OTTHUMG00000000851.4 24052 3943 55 ENSG00000230833.1 RPEP3 chr1 27739954 27740629 + processed_pseudogene KNOWN OTTHUMG00000003733.1 676 676 1 ENSG00000168955.3 TM4SF20 chr2 227362156 227381995 - protein_coding KNOWN OTTHUMG00000133187.3 19840 2757 6 ENSG00000266382.1 MIR5703 chr2 227472132 227472187 + miRNA KNOWN NA 56 56 1 ENSG00000173744.16 AGFG1 chr2 227472152 227561214 + protein_coding KNOWN OTTHUMG00000133186.4 89063 9321 80 ENSG00000042304.9 C2orf83 chr2 227610090 227633320 - protein_coding KNOWN OTTHUMG00000153550.1 23231 2087 7 ENSG00000236116.1 AC064853.2 chr2 227616998 227617790 - sense_intronic NOVEL OTTHUMG00000153551.1 793 540 2 ENSG00000250599.1 AC064853.3 chr2 227632969 227648606 - unprocessed_pseudogene KNOWN OTTHUMG00000153552.1 15638 1139 4 ENSG00000135917.12 SLC19A3 chr2 227685210 227718012 - protein_coding KNOWN OTTHUMG00000133185.3 32803 5329 31 ENSG00000252346.1 RNA5SP121 chr2 227763052 227763152 - rRNA KNOWN NA 101 101 1 ENSG00000226718.1 SNRPGP8 chr2 227778510 227778735 - processed_pseudogene KNOWN OTTHUMG00000153554.1 226 226 1 ENSG00000229172.1 AC073065.3 chr2 227801840 227804705 + processed_pseudogene KNOWN OTTHUMG00000153567.1 2866 2866 1 ENSG00000117758.12 STX12 chr1 27773183 27824452 + protein_coding KNOWN OTTHUMG00000003730.2 51270 3846 25 ENSG00000115009.10 CCL20 chr2 227813842 227817564 + protein_coding KNOWN OTTHUMG00000133189.3 3723 1343 13 ENSG00000183514.4 TDGF1P2 chr2 227870083 227870644 - processed_pseudogene KNOWN OTTHUMG00000153585.1 562 562 1 ENSG00000123977.8 DAW1 chr2 227871054 227924344 + protein_coding KNOWN OTTHUMG00000133190.3 53291 2933 44 ENSG00000272237.1 SNORA25 chr2 227887631 227887744 + snoRNA NOVEL NA 114 114 1 ENSG00000153820.11 SPHKAP chr2 227979950 228181645 - protein_coding KNOWN OTTHUMG00000153584.1 201696 7009 27 ENSG00000200281.1 RNU6-624P chr2 228169743 228169849 + snRNA KNOWN NA 107 107 1 ENSG00000203387.2 AC074019.2 chr2 228352120 228353215 - processed_pseudogene KNOWN OTTHUMG00000153587.2 1096 1096 1 ENSG00000232023.2 AC009410.1 chr2 228483261 228611395 - lincRNA NOVEL OTTHUMG00000153589.2 128135 676 4 ENSG00000228226.1 AC074019.1 chr2 228683537 228684580 - lincRNA NOVEL OTTHUMG00000153588.1 1044 427 2 ENSG00000237322.1 RPL7L1P10 chr2 228753324 228753786 + processed_pseudogene KNOWN OTTHUMG00000153591.1 463 463 1 ENSG00000269971.1 RP3-426I6.5 chr1 27773858 27774041 + sense_intronic NOVEL OTTHUMG00000183954.1 184 184 1 ENSG00000153823.17 PID1 chr2 228850526 229271285 - protein_coding KNOWN OTTHUMG00000133191.5 420760 3364 19 ENSG00000226297.1 AC007677.2 chr2 229003886 229004400 + processed_pseudogene KNOWN OTTHUMG00000153592.1 515 515 1 ENSG00000253006.1 RN7SKP283 chr2 229236340 229236609 - misc_RNA KNOWN NA 270 270 1 ENSG00000187957.7 DNER chr2 229357629 229714558 - protein_coding KNOWN OTTHUMG00000153637.1 356930 3935 16 ENSG00000238782.1 RNU7-9P chr2 229606238 229606299 + snRNA KNOWN NA 62 62 1 ENSG00000235993.1 AC007559.1 chr2 229701794 229702148 + processed_pseudogene KNOWN OTTHUMG00000153610.1 355 355 1 ENSG00000153827.12 TRIP12 chr2 229763838 229923239 - protein_coding KNOWN OTTHUMG00000153623.5 159402 12594 187 ENSG00000222344.1 RNU6-613P chr2 229894346 229894453 + snRNA KNOWN NA 108 108 1 ENSG00000153832.10 FBXO36 chr2 229922302 230013109 + protein_coding KNOWN OTTHUMG00000133206.3 90808 3945 15 ENSG00000252333.1 RNU6-964P chr2 229937814 229937882 - snRNA KNOWN NA 69 69 1 ENSG00000276889.1 AL020997.1 chr1 27809701 27809788 + miRNA NOVEL NA 88 88 1 ENSG00000231534.1 FBXO36-IT1 chr2 229942728 229945137 + sense_intronic NOVEL OTTHUMG00000153612.1 2410 582 2 ENSG00000206725.1 RNU6-1027P chr2 229973315 229973421 + snRNA KNOWN NA 107 107 1 ENSG00000278076.1 AC009973.1 chr2 229993870 229993921 - miRNA NOVEL NA 52 52 1 ENSG00000163053.9 SLC16A14 chr2 230034974 230068999 - protein_coding KNOWN OTTHUMG00000133205.3 34026 4946 20 ENSG00000199400.1 RNY4P19 chr2 230058229 230058324 - misc_RNA KNOWN NA 96 96 1 ENSG00000225963.6 AC009950.2 chr2 230121370 230174223 + antisense NOVEL OTTHUMG00000154963.4 52854 3734 38 ENSG00000135899.15 SP110 chr2 230167293 230225729 - protein_coding KNOWN OTTHUMG00000133204.4 58437 6865 109 ENSG00000280755.1 SP110 chr2 230176665 230221721 - protein_coding KNOWN NA 45057 1668 15 ENSG00000079263.17 SP140 chr2 230203110 230313215 + protein_coding KNOWN OTTHUMG00000153670.7 110106 5582 139 ENSG00000185404.15 SP140L chr2 230327184 230403732 + protein_coding KNOWN OTTHUMG00000153730.3 76549 5650 100 ENSG00000270031.1 RP3-426I6.6 chr1 27819983 27820341 + sense_intronic NOVEL OTTHUMG00000183955.1 359 359 1 ENSG00000279964.1 RP11-69J7.1 chr2 230410700 230412529 - TEC KNOWN OTTHUMG00000176333.1 1830 1830 1 ENSG00000067066.15 SP100 chr2 230415942 230544090 + protein_coding KNOWN OTTHUMG00000133203.16 128149 12618 194 ENSG00000243650.3 RN7SL834P chr2 230507101 230507386 + misc_RNA KNOWN NA 286 286 1 ENSG00000250011.1 HMGB1P3 chr2 230515023 230515638 + processed_pseudogene KNOWN OTTHUMG00000153731.1 616 616 1 ENSG00000235419.4 AC010149.4 chr2 230520594 230580006 - antisense NOVEL OTTHUMG00000153765.1 59413 692 13 ENSG00000183022.5 TPM3P8 chr2 230573167 230573809 - processed_pseudogene KNOWN OTTHUMG00000153766.1 643 643 1 ENSG00000199791.1 RNU6-451P chr2 230587121 230587227 + snRNA KNOWN NA 107 107 1 ENSG00000226125.1 AC098823.3 chr2 230690921 230700529 - lincRNA NOVEL OTTHUMG00000153829.1 9609 2609 4 ENSG00000135932.9 CAB39 chr2 230712845 230821075 + protein_coding KNOWN OTTHUMG00000133220.2 108231 5360 43 ENSG00000237758.1 BANF1P3 chr2 230725143 230725403 - processed_pseudogene KNOWN OTTHUMG00000153830.1 261 261 1 ENSG00000223062.1 RNU6-1245P chr1 27824538 27824643 + snRNA KNOWN NA 106 106 1 ENSG00000201044.1 RNU6-268P chr2 230752141 230752247 + snRNA KNOWN NA 107 107 1 ENSG00000270891.1 RP11-499P1.1 chr2 230836909 230837385 + processed_pseudogene KNOWN OTTHUMG00000184256.1 477 477 1 ENSG00000135916.14 ITM2C chr2 230864639 230879248 + protein_coding KNOWN OTTHUMG00000133219.3 14610 2611 44 ENSG00000232520.1 AC012507.3 chr2 230886500 230897091 + antisense NOVEL OTTHUMG00000153828.1 10592 2265 9 ENSG00000135898.8 GPR55 chr2 230907318 230961066 - protein_coding KNOWN OTTHUMG00000133224.3 53749 4130 12 ENSG00000230385.1 AC012507.4 chr2 230908852 230910102 + antisense NOVEL OTTHUMG00000153836.1 1251 600 2 ENSG00000235013.1 COX20P2 chr2 230957593 230957950 + processed_pseudogene KNOWN OTTHUMG00000153827.1 358 358 1 ENSG00000238062.4 SPATA3-AS1 chr2 230984368 230996032 - lincRNA NOVEL OTTHUMG00000154076.1 11665 3693 29 ENSG00000173699.14 SPATA3 chr2 230996121 231025055 + protein_coding KNOWN OTTHUMG00000133221.4 28935 2066 48 ENSG00000204128.5 C2orf72 chr2 231037490 231049719 + protein_coding KNOWN OTTHUMG00000153996.2 12230 3851 8 ENSG00000117751.16 PPP1R8 chr1 27830778 27851676 + protein_coding KNOWN OTTHUMG00000003734.3 20899 2819 29 ENSG00000261829.1 RP11-223I10.1 chr2 231052040 231052637 + sense_overlapping NOVEL OTTHUMG00000176272.1 598 598 1 ENSG00000173692.11 PSMD1 chr2 231056864 231172827 + protein_coding KNOWN OTTHUMG00000133223.2 115964 5187 144 ENSG00000135914.5 HTR2B chr2 231108230 231125118 - protein_coding KNOWN OTTHUMG00000133222.2 16889 2246 4 ENSG00000201574.1 RNU1-93P chr2 231133462 231133630 + snRNA KNOWN NA 169 169 1 ENSG00000135931.16 ARMC9 chr2 231198546 231374837 + protein_coding KNOWN OTTHUMG00000133229.8 176292 9661 129 ENSG00000237039.1 AC018738.2 chr2 231256097 231256306 + processed_pseudogene KNOWN OTTHUMG00000153962.2 210 210 1 ENSG00000263641.1 MIR4777 chr2 231362708 231362793 + miRNA KNOWN NA 86 86 1 ENSG00000224376.1 AC017104.6 chr2 231388976 231394991 + processed_transcript NOVEL OTTHUMG00000153881.1 6016 1597 6 ENSG00000156966.6 B3GNT7 chr2 231395543 231401164 + protein_coding KNOWN OTTHUMG00000153880.1 5622 3806 4 ENSG00000172799.5 ZBTB8OSP2 chr2 231433923 231434426 - processed_pseudogene KNOWN OTTHUMG00000153872.1 504 504 1 ENSG00000252947.1 SCARNA1 chr1 27834401 27834566 + scaRNA KNOWN NA 166 166 1 ENSG00000230047.1 AC017104.4 chr2 231437101 231437421 - processed_pseudogene KNOWN OTTHUMG00000153873.1 321 321 1 ENSG00000233538.1 AC017104.2 chr2 231452195 231453153 + lincRNA NOVEL OTTHUMG00000153867.1 959 568 3 ENSG00000115053.14 NCL chr2 231453531 231483641 - protein_coding KNOWN OTTHUMG00000153866.2 30111 6929 57 ENSG00000206885.1 SNORA75 chr2 231455800 231455936 - snoRNA KNOWN NA 137 137 1 ENSG00000281035.1 AC017104.3 chr2 231456417 231456557 - miRNA NOVEL NA 141 141 1 ENSG00000207280.1 SNORD20 chr2 231456444 231456523 - snoRNA KNOWN NA 80 80 1 ENSG00000202400.1 SNORD82 chr2 231460371 231460440 - snoRNA KNOWN NA 70 70 1 ENSG00000263774.1 AC017104.1 chr2 231490204 231490289 - miRNA NOVEL NA 86 86 1 ENSG00000223198.1 RNU2-22P chr2 231501990 231502201 - snRNA KNOWN NA 212 212 1 ENSG00000181798.2 LINC00471 chr2 231508426 231514339 - lincRNA KNOWN OTTHUMG00000133227.2 5914 1282 3 ENSG00000278868.1 AL109927.1 chr1 27850574 27850744 - protein_coding KNOWN NA 171 171 1 ENSG00000171596.6 NMUR1 chr2 231523160 231530495 - protein_coding KNOWN OTTHUMG00000133225.2 7336 3298 3 ENSG00000231494.1 AC104634.3 chr2 231559903 231560364 + processed_pseudogene KNOWN OTTHUMG00000153868.1 462 462 1 ENSG00000228884.2 AC104634.2 chr2 231585864 231586327 + processed_pseudogene KNOWN OTTHUMG00000153865.1 464 464 1 ENSG00000177673.3 C2orf57 chr2 231592901 231594283 + protein_coding KNOWN OTTHUMG00000133226.1 1383 1383 1 ENSG00000239202.3 RN7SL499P chr2 231645998 231646273 - misc_RNA KNOWN NA 276 276 1 ENSG00000187514.13 PTMA chr2 231706895 231713541 + protein_coding KNOWN OTTHUMG00000153810.2 6647 3378 60 ENSG00000277986.1 U4 chr2 231711525 231711647 + snRNA NOVEL NA 123 123 1 ENSG00000156973.12 PDE6D chr2 231732425 231786272 - protein_coding KNOWN OTTHUMG00000153785.2 53848 2850 19 ENSG00000253084.2 RNU6-840P chr2 231757887 231757950 + snRNA KNOWN NA 64 64 1 ENSG00000281072.1 AC073476.1 chr2 231768604 231768680 + pseudogene NOVEL NA 77 72 2 ENSG00000130775.14 THEMIS2 chr1 27872543 27886685 + protein_coding KNOWN OTTHUMG00000003735.4 14143 4621 43 ENSG00000144524.16 COPS7B chr2 231781671 231809254 + protein_coding KNOWN OTTHUMG00000133228.3 27584 6066 123 ENSG00000237641.1 RP11-690I21.1 chr2 231789481 231789887 - processed_pseudogene KNOWN OTTHUMG00000157084.1 407 407 1 ENSG00000261096.1 RP11-690I21.2 chr2 231809846 231812352 + sense_overlapping NOVEL OTTHUMG00000176280.1 2507 2507 1 ENSG00000260622.1 RP11-690I21.3 chr2 231810348 231810844 - processed_pseudogene KNOWN OTTHUMG00000176281.1 497 497 1 ENSG00000222246.1 MIR1471 chr2 231892242 231892298 - miRNA KNOWN NA 57 57 1 ENSG00000163273.3 NPPC chr2 231921820 231926403 - protein_coding KNOWN OTTHUMG00000133232.2 4584 1071 5 ENSG00000144535.18 DIS3L2 chr2 231961245 232344350 + protein_coding KNOWN OTTHUMG00000153385.2 383106 11337 170 ENSG00000227033.1 AC105461.1 chr2 231978488 232015720 - antisense NOVEL OTTHUMG00000153384.1 37233 391 2 ENSG00000207626.1 MIR562 chr2 232172653 232172747 + miRNA KNOWN NA 95 95 1 ENSG00000251485.1 AC068134.10 chr2 232343116 232343903 + processed_pseudogene KNOWN OTTHUMG00000153352.1 788 788 1 ENSG00000186891.12 TNFRSF18 chr1 1203508 1206691 - protein_coding KNOWN OTTHUMG00000001414.3 3184 1370 18 ENSG00000117748.8 RPA2 chr1 27891524 27914746 - protein_coding KNOWN OTTHUMG00000003915.3 23223 2019 37 ENSG00000230122.1 ECEL1P3 chr2 232349754 232351309 - unprocessed_pseudogene KNOWN OTTHUMG00000153353.1 1556 737 3 ENSG00000275157.1 RP11-762N20.1 chr2 232368576 232368697 + unprocessed_pseudogene KNOWN OTTHUMG00000187705.1 122 122 1 ENSG00000163283.6 ALPP chr2 232378534 232382889 + protein_coding KNOWN OTTHUMG00000133255.4 4356 3059 17 ENSG00000224516.4 AC068134.8 chr2 232379635 232381674 - antisense NOVEL OTTHUMG00000153355.1 2040 680 5 ENSG00000244280.1 ECEL1P2 chr2 232385750 232387457 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000153343.2 1708 1708 2 ENSG00000163286.6 ALPPL2 chr2 232406843 232410714 + protein_coding KNOWN OTTHUMG00000133257.2 3872 2493 24 ENSG00000204121.2 ECEL1P1 chr2 232415818 232419816 - unprocessed_pseudogene KNOWN OTTHUMG00000153336.1 3999 1742 9 ENSG00000237087.1 AC068134.6 chr2 232420661 232421461 - lincRNA NOVEL OTTHUMG00000153335.1 801 576 2 ENSG00000223788.4 DIS3L2P1 chr2 232442034 232447418 + unprocessed_pseudogene KNOWN OTTHUMG00000153337.1 5385 559 5 ENSG00000163295.4 ALPI chr2 232456123 232460032 + protein_coding KNOWN OTTHUMG00000133258.2 3910 2632 21 ENSG00000130768.13 SMPDL3B chr1 27934993 27959157 + protein_coding KNOWN OTTHUMG00000003910.2 24165 2670 42 ENSG00000171551.10 ECEL1 chr2 232479827 232487828 - protein_coding KNOWN OTTHUMG00000133262.2 8002 2972 58 ENSG00000237412.5 PRSS56 chr2 232520463 232525716 + protein_coding KNOWN OTTHUMG00000153326.3 5254 2390 28 ENSG00000135902.8 CHRND chr2 232525993 232536667 + protein_coding KNOWN OTTHUMG00000133261.2 10675 3132 58 ENSG00000196811.10 CHRNG chr2 232539727 232546403 + protein_coding KNOWN OTTHUMG00000153327.1 6677 2615 28 ENSG00000221944.4 TIGD1 chr2 232547968 232550592 - protein_coding KNOWN OTTHUMG00000133260.2 2625 2625 1 ENSG00000135930.12 EIF4E2 chr2 232550052 232583644 + protein_coding KNOWN OTTHUMG00000133256.2 33593 7177 68 ENSG00000266620.1 MIR5001 chr2 232550474 232550573 - miRNA KNOWN NA 100 100 1 ENSG00000237126.7 AC073254.1 chr2 232580948 232611971 - antisense NOVEL OTTHUMG00000153318.5 31024 3725 46 ENSG00000115468.10 EFHD1 chr2 232606057 232682781 + protein_coding KNOWN OTTHUMG00000133263.2 76725 3052 27 ENSG00000244384.3 RN7SL359P chr2 232649849 232650136 + misc_RNA KNOWN NA 288 288 1 ENSG00000227050.1 RP11-460I13.2 chr1 27938875 27960193 - antisense NOVEL OTTHUMG00000003911.1 21319 491 5 ENSG00000204120.13 GIGYF2 chr2 232697299 232860575 + protein_coding KNOWN OTTHUMG00000153237.7 163277 13416 412 ENSG00000213055.3 EEF1B2P7 chr2 232729523 232730198 - processed_pseudogene KNOWN OTTHUMG00000153290.1 676 676 1 ENSG00000241409.1 AC064852.4 chr2 232760146 232767949 - 3prime_overlapping_ncrna NOVEL OTTHUMG00000153291.1 7804 851 3 ENSG00000115474.6 KCNJ13 chr2 232766464 232776568 - protein_coding KNOWN OTTHUMG00000153292.1 10105 2977 13 ENSG00000252452.1 RNU6-107P chr2 232782665 232782766 + snRNA KNOWN NA 102 102 1 ENSG00000199781.1 Y_RNA chr2 232828653 232828751 + misc_RNA NOVEL NA 99 99 1 ENSG00000182600.8 C2orf82 chr2 232857270 232878708 + protein_coding KNOWN OTTHUMG00000133273.4 21439 3698 24 ENSG00000066248.13 NGEF chr2 232878686 233013272 - protein_coding KNOWN OTTHUMG00000133272.15 134587 4678 56 ENSG00000222001.2 AC106876.2 chr2 233012614 233015885 + processed_transcript NOVEL OTTHUMG00000153231.1 3272 813 5 ENSG00000115488.3 NEU2 chr2 233032672 233035057 + protein_coding KNOWN OTTHUMG00000133274.2 2386 1143 2 ENSG00000158156.7 XKR8 chr1 27959462 27968096 + protein_coding KNOWN OTTHUMG00000003912.1 8635 2743 6 ENSG00000168918.12 INPP5D chr2 233059967 233207903 + protein_coding KNOWN OTTHUMG00000133688.6 147937 8681 115 ENSG00000263941.2 RN7SL32P chr2 233205199 233205479 + misc_RNA KNOWN NA 281 281 1 ENSG00000085978.20 ATG16L1 chr2 233210051 233295674 + protein_coding KNOWN OTTHUMG00000133619.5 85624 6047 189 ENSG00000252010.1 SCARNA5 chr2 233275727 233276002 + scaRNA KNOWN NA 276 276 1 ENSG00000251791.1 SCARNA6 chr2 233288676 233288940 + scaRNA KNOWN NA 265 265 1 ENSG00000130561.15 SAG chr2 233307816 233347055 + protein_coding KNOWN OTTHUMG00000153213.2 39240 11885 115 ENSG00000259793.1 RP11-400N9.1 chr2 233351132 233353416 - antisense KNOWN OTTHUMG00000176291.1 2285 2285 1 ENSG00000077044.8 DGKD chr2 233354507 233472104 + protein_coding KNOWN OTTHUMG00000133290.5 117598 9771 169 ENSG00000201013.1 Y_RNA chr2 233379843 233379955 - misc_RNA NOVEL NA 113 113 1 ENSG00000085982.12 USP40 chr2 233475520 233566782 - protein_coding KNOWN OTTHUMG00000153199.5 91263 9352 167 ENSG00000158161.14 EYA3 chr1 27970344 28088696 - protein_coding KNOWN OTTHUMG00000003916.1 118353 6483 111 ENSG00000271639.1 RP11-289A15.1 chr2 233545482 233547032 + processed_pseudogene KNOWN OTTHUMG00000184255.1 1551 1551 1 ENSG00000228949.1 UGT1A12P chr2 233585439 233586291 + unprocessed_pseudogene KNOWN OTTHUMG00000059116.1 853 853 1 ENSG00000227846.1 UGT1A11P chr2 233603553 233604401 + unprocessed_pseudogene KNOWN OTTHUMG00000059006.1 849 849 1 ENSG00000242366.3 UGT1A8 chr2 233617645 233773310 + protein_coding KNOWN OTTHUMG00000059123.1 155666 2407 5 ENSG00000242515.4 UGT1A10 chr2 233636454 233773305 + protein_coding KNOWN OTTHUMG00000059121.1 136852 3157 10 ENSG00000234143.1 UGT1A13P chr2 233647926 233649026 + unprocessed_pseudogene KNOWN OTTHUMG00000059007.1 1101 762 2 ENSG00000241119.1 UGT1A9 chr2 233671853 233773300 + protein_coding KNOWN OTTHUMG00000059124.1 101448 2416 5 ENSG00000244122.2 UGT1A7 chr2 233681938 233773299 + protein_coding KNOWN OTTHUMG00000059004.3 91362 4167 8 ENSG00000167165.17 UGT1A6 chr2 233691607 233773300 + protein_coding KNOWN OTTHUMG00000059122.8 81694 5180 33 ENSG00000224814.1 AC114812.8 chr2 233693434 233708699 - antisense NOVEL OTTHUMG00000059036.1 15266 663 2 ENSG00000238231.2 RP11-460I13.6 chr1 27990158 27990524 - processed_pseudogene KNOWN OTTHUMG00000003914.2 367 367 1 ENSG00000240224.1 UGT1A5 chr2 233712992 233773299 + protein_coding KNOWN OTTHUMG00000059120.1 60308 2345 5 ENSG00000244474.4 UGT1A4 chr2 233718778 233773299 + protein_coding KNOWN OTTHUMG00000059119.3 54522 2522 11 ENSG00000233445.1 RPL17P11 chr2 233721522 233722065 - processed_pseudogene KNOWN OTTHUMG00000059030.1 544 544 1 ENSG00000243135.4 UGT1A3 chr2 233729108 233773299 + protein_coding KNOWN OTTHUMG00000059118.1 44192 4449 10 ENSG00000248114.1 AC114812.9 chr2 233738952 233741957 + unprocessed_pseudogene KNOWN OTTHUMG00000132289.1 3006 730 3 ENSG00000227802.1 DNAJB3 chr2 233742750 233744015 - transcribed_processed_pseudogene KNOWN OTTHUMG00000059034.2 1266 1266 2 ENSG00000228445.1 UGT1A2P chr2 233747214 233748079 + unprocessed_pseudogene KNOWN OTTHUMG00000059035.1 866 866 1 ENSG00000248705.1 AC114812.10 chr2 233750617 233753656 + unprocessed_pseudogene KNOWN OTTHUMG00000132288.1 3040 757 3 ENSG00000178836.6 AC114812.5 chr2 233754305 233755345 - transcribed_processed_pseudogene KNOWN OTTHUMG00000059033.2 1041 1041 6 ENSG00000241635.6 UGT1A1 chr2 233760248 233773299 + protein_coding KNOWN OTTHUMG00000059117.1 13052 4467 10 ENSG00000281570.1 Metazoa_SRP chr1 28001639 28001894 - misc_RNA NOVEL NA 256 256 1 ENSG00000185038.13 MROH2A chr2 233775679 233833423 + protein_coding KNOWN OTTHUMG00000059037.10 57745 5730 106 ENSG00000123485.10 HJURP chr2 233833416 233854566 - protein_coding KNOWN OTTHUMG00000059125.10 21151 3821 48 ENSG00000224287.2 MSL3P1 chr2 233865437 233868444 - transcribed_processed_pseudogene KNOWN OTTHUMG00000059126.4 3008 2278 4 ENSG00000279809.1 AC005538.3 chr2 233865496 233867359 - TEC KNOWN OTTHUMG00000059127.2 1864 1864 1 ENSG00000144481.15 TRPM8 chr2 233917398 234019522 + protein_coding KNOWN OTTHUMG00000059129.10 102125 7903 123 ENSG00000237581.1 AC005538.5 chr2 233946146 233955435 - antisense NOVEL OTTHUMG00000059128.1 9290 594 2 ENSG00000274951.1 AC005538.1 chr2 234012157 234012265 - miRNA NOVEL NA 109 109 1 ENSG00000072080.9 SPP2 chr2 234050679 234077134 + protein_coding KNOWN OTTHUMG00000059208.4 26456 1265 25 ENSG00000279218.1 RP11-263G22.1 chr2 234082259 234084490 + TEC KNOWN OTTHUMG00000176295.1 2232 2232 1 ENSG00000226442.2 AC006037.2 chr2 234109081 234109481 + lincRNA NOVEL OTTHUMG00000059209.1 401 287 2 ENSG00000240750.3 RN7SL559P chr1 28031884 28032180 - misc_RNA KNOWN NA 297 297 1 ENSG00000261298.1 RP11-309M7.1 chr2 234222838 234224514 + lincRNA NOVEL OTTHUMG00000176300.1 1677 1677 2 ENSG00000237784.1 AC097713.5 chr2 234329483 234329838 + processed_pseudogene KNOWN OTTHUMG00000153156.1 356 356 1 ENSG00000228162.1 AC097713.3 chr2 234438328 234462127 + lincRNA NOVEL OTTHUMG00000153158.1 23800 562 3 ENSG00000231682.1 AC097713.4 chr2 234444590 234454595 - lincRNA NOVEL OTTHUMG00000153157.1 10006 538 3 ENSG00000232690.1 HSPE1P9 chr2 234455157 234455783 - unprocessed_pseudogene KNOWN OTTHUMG00000153155.1 627 311 2 ENSG00000188042.7 ARL4C chr2 234493041 234497053 - protein_coding KNOWN OTTHUMG00000133291.2 4013 4013 3 ENSG00000280744.1 LINC01173 chr2 234682668 234717764 + lincRNA KNOWN OTTHUMG00000189551.1 35097 331 3 ENSG00000278593.1 RP13-977E11.1 chr2 234743542 234745606 - unprocessed_pseudogene KNOWN OTTHUMG00000187710.1 2065 1748 2 ENSG00000235726.4 AC010148.1 chr2 234834315 234913384 - processed_transcript NOVEL OTTHUMG00000153147.1 79070 2973 13 ENSG00000130147.14 SH3BP4 chr2 234951973 235055714 + protein_coding KNOWN OTTHUMG00000133292.3 103742 7129 44 ENSG00000280526.1 AL137792.1 chr1 28091276 28091381 + miRNA NOVEL NA 106 106 1 ENSG00000226542.1 AC114814.4 chr2 235084822 235088586 - lincRNA NOVEL OTTHUMG00000153145.1 3765 691 3 ENSG00000231032.1 AC114814.2 chr2 235147016 235147500 - processed_pseudogene KNOWN OTTHUMG00000153148.1 485 485 1 ENSG00000235293.1 AC114814.3 chr2 235177896 235178905 + lincRNA NOVEL OTTHUMG00000153146.1 1010 663 2 ENSG00000157985.16 AGAP1 chr2 235494089 236131800 + protein_coding KNOWN OTTHUMG00000133293.4 637712 13898 131 ENSG00000235529.1 AGAP1-IT1 chr2 235505751 235507566 + sense_intronic NOVEL OTTHUMG00000153124.1 1816 664 2 ENSG00000222007.5 AC064874.1 chr2 235773855 235783387 - antisense NOVEL OTTHUMG00000153125.1 9533 600 6 ENSG00000228499.1 TMSB10P1 chr2 235882362 235882493 - processed_pseudogene KNOWN OTTHUMG00000153123.1 132 132 1 ENSG00000238812.1 RNU7-127P chr2 236037250 236037311 + snRNA KNOWN NA 62 62 1 ENSG00000264676.2 RN7SL204P chr2 236072295 236072556 + misc_RNA KNOWN NA 262 262 1 ENSG00000207049.1 Y_RNA chr2 236153071 236153172 - misc_RNA NOVEL NA 102 102 1 ENSG00000228589.3 SPCS2P4 chr1 28095742 28096422 - processed_pseudogene KNOWN OTTHUMG00000003917.1 681 681 1 ENSG00000168505.6 GBX2 chr2 236165236 236168369 - protein_coding KNOWN OTTHUMG00000133294.3 3134 2315 7 ENSG00000233611.3 AC079135.1 chr2 236167447 236294927 + antisense NOVEL OTTHUMG00000153089.2 127481 1115 6 ENSG00000182177.12 ASB18 chr2 236194872 236264409 - protein_coding KNOWN OTTHUMG00000153086.1 69538 5436 15 ENSG00000200745.1 RNU1-31P chr2 236210373 236210548 - snRNA KNOWN NA 176 176 1 ENSG00000132321.15 IQCA1 chr2 236324147 236507542 - protein_coding KNOWN OTTHUMG00000153058.2 183396 5975 108 ENSG00000270540.1 RP11-785G17.1 chr2 236367560 236369102 + antisense NOVEL OTTHUMG00000185151.1 1543 1543 1 ENSG00000232893.1 IQCA1-AS1 chr2 236391074 236392388 + antisense NOVEL OTTHUMG00000153059.1 1315 489 2 ENSG00000231546.1 RPL3P5 chr2 236407846 236409077 - transcribed_processed_pseudogene KNOWN OTTHUMG00000153071.1 1232 1232 1 ENSG00000144476.5 ACKR3 chr2 236567787 236582358 + protein_coding KNOWN OTTHUMG00000133295.2 14572 2258 4 ENSG00000232328.1 AC011286.1 chr2 236733382 236754363 + lincRNA NOVEL OTTHUMG00000153025.1 20982 1408 5 ENSG00000186827.9 TNFRSF4 chr1 1211326 1214138 - protein_coding KNOWN OTTHUMG00000001415.3 2813 1721 16 ENSG00000228943.1 RP5-1053E7.2 chr1 28109739 28110298 + processed_pseudogene KNOWN OTTHUMG00000003951.1 560 235 2 ENSG00000202341.1 RNU6-1051P chr2 237015204 237015305 - snRNA KNOWN NA 102 102 1 ENSG00000124835.2 AC105760.3 chr2 237048599 237056167 - antisense NOVEL OTTHUMG00000153026.1 7569 2231 7 ENSG00000227252.1 AC105760.2 chr2 237059434 237085817 - antisense NOVEL OTTHUMG00000153027.1 26384 2341 2 ENSG00000198612.9 COPS8 chr2 237085312 237100466 + protein_coding KNOWN OTTHUMG00000133297.4 15155 4743 43 ENSG00000224844.1 AC107079.1 chr2 237122910 237124097 - lincRNA NOVEL OTTHUMG00000153018.1 1188 669 2 ENSG00000224132.2 AC112715.2 chr2 237257091 237257676 + lincRNA NOVEL OTTHUMG00000153019.3 586 350 2 ENSG00000163359.14 COL6A3 chr2 237324003 237414375 - protein_coding KNOWN OTTHUMG00000150020.5 90373 19633 262 ENSG00000222022.1 AC112721.1 chr2 237421420 237425276 - lincRNA NOVEL OTTHUMG00000152981.1 3857 588 3 ENSG00000222032.1 AC112721.2 chr2 237428920 237434822 - lincRNA NOVEL OTTHUMG00000152980.2 5903 541 3 ENSG00000115648.12 MLPH chr2 237485428 237555318 + protein_coding KNOWN OTTHUMG00000133298.2 69891 7514 178 ENSG00000214812.3 RP5-1053E7.3 chr1 28120449 28121321 - processed_pseudogene KNOWN OTTHUMG00000003952.2 873 557 2 ENSG00000277842.1 MIR6811 chr2 237510931 237510988 + miRNA KNOWN NA 58 58 1 ENSG00000222449.1 RNU6-1140P chr2 237563165 237563270 + snRNA KNOWN NA 106 106 1 ENSG00000071677.1 PRLH chr2 237566574 237567175 + protein_coding KNOWN OTTHUMG00000133296.1 602 264 2 ENSG00000124839.11 RAB17 chr2 237574322 237601614 - protein_coding KNOWN OTTHUMG00000133299.4 27293 4783 44 ENSG00000234949.2 AC104667.3 chr2 237591020 237595981 + antisense NOVEL OTTHUMG00000152979.1 4962 1656 6 ENSG00000227107.1 AC096574.5 chr2 237612977 237626525 + lincRNA NOVEL OTTHUMG00000152959.1 13549 2057 2 ENSG00000124831.17 LRRFIP1 chr2 237627576 237813682 + protein_coding KNOWN OTTHUMG00000133339.3 186107 11901 108 ENSG00000177483.10 RBM44 chr2 237798389 237842808 + protein_coding KNOWN OTTHUMG00000152937.4 44420 6049 64 ENSG00000132329.9 RAMP1 chr2 237858893 237912114 + protein_coding KNOWN OTTHUMG00000133337.3 53222 1234 13 ENSG00000263723.1 SNORD39 chr2 237869904 237869982 + snoRNA NOVEL NA 79 79 1 ENSG00000253005.1 RNU6-176P chr1 28142737 28142841 - snRNA KNOWN NA 105 105 1 ENSG00000184182.17 UBE2F chr2 237966827 238042782 + protein_coding KNOWN OTTHUMG00000133341.3 75956 4238 188 ENSG00000258984.4 UBE2F-SCLY chr2 237967014 238099412 + protein_coding KNOWN OTTHUMG00000170602.1 132399 3195 30 ENSG00000251971.1 RNU6-1333P chr2 238028971 238029063 - snRNA KNOWN NA 93 93 1 ENSG00000132330.15 SCLY chr2 238060889 238099413 + protein_coding KNOWN OTTHUMG00000133336.3 38525 11733 113 ENSG00000144488.13 ESPNL chr2 238100157 238133287 + protein_coding KNOWN OTTHUMG00000133335.2 33131 5362 30 ENSG00000168427.8 KLHL30 chr2 238138722 238152947 + protein_coding KNOWN OTTHUMG00000152905.1 14226 3726 8 ENSG00000279484.1 KLHL30-AS1 chr2 238152889 238155994 - TEC KNOWN OTTHUMG00000152904.1 3106 3106 1 ENSG00000178752.14 FAM132B chr2 238158982 238168900 + protein_coding KNOWN OTTHUMG00000152901.2 9919 3572 30 ENSG00000132323.7 ILKAP chr2 238170401 238203729 - protein_coding KNOWN OTTHUMG00000133334.2 33329 4771 81 ENSG00000186235.9 AC016757.3 chr2 238224552 238231677 - processed_transcript NOVEL OTTHUMG00000152898.1 7126 2906 18 ENSG00000169403.10 PTAFR chr1 28147166 28193936 - protein_coding KNOWN OTTHUMG00000003953.1 46771 4706 7 ENSG00000225057.2 AC096574.4 chr2 238231684 238255633 + processed_transcript NOVEL OTTHUMG00000133338.5 23950 3890 9 ENSG00000144485.9 HES6 chr2 238238267 238240662 - protein_coding KNOWN OTTHUMG00000133340.2 2396 2037 30 ENSG00000132326.10 PER2 chr2 238244038 238290102 - protein_coding KNOWN OTTHUMG00000152884.1 46065 6877 40 ENSG00000232306.1 AC012485.2 chr2 238298710 238300620 - antisense NOVEL OTTHUMG00000152883.1 1911 563 3 ENSG00000204104.10 TRAF3IP1 chr2 238320441 238400900 + protein_coding KNOWN OTTHUMG00000152872.1 80460 4617 46 ENSG00000202099.1 RNU6-234P chr2 238412642 238412745 + snRNA KNOWN NA 104 104 1 ENSG00000065802.10 ASB1 chr2 238426742 238452250 + protein_coding KNOWN OTTHUMG00000152866.1 25509 7410 31 ENSG00000229915.1 AC016999.2 chr2 238427077 238427729 - antisense NOVEL OTTHUMG00000152867.1 653 452 2 ENSG00000274346.1 RP11-40B20.1 chr2 238454908 238457520 + unprocessed_pseudogene KNOWN OTTHUMG00000187713.1 2613 556 2 ENSG00000225493.1 LINC01107 chr2 238510690 238555054 - lincRNA NOVEL OTTHUMG00000152849.1 44365 1975 3 ENSG00000126698.9 DNAJC8 chr1 28199456 28233025 - protein_coding KNOWN OTTHUMG00000003538.3 33570 2888 35 ENSG00000234279.1 AC113618.1 chr2 238720324 238740780 + lincRNA NOVEL OTTHUMG00000152851.1 20457 553 2 ENSG00000224252.1 AC113618.2 chr2 238735263 238735547 - processed_pseudogene KNOWN OTTHUMG00000152850.1 285 285 1 ENSG00000226992.1 AC144525.1 chr2 238788648 238789716 - lincRNA NOVEL OTTHUMG00000152844.1 1069 592 2 ENSG00000233608.3 TWIST2 chr2 238848032 238910543 + protein_coding KNOWN OTTHUMG00000152836.2 62512 1878 4 ENSG00000227744.4 FLJ43879 chr2 238919302 238926269 - lincRNA NOVEL OTTHUMG00000152837.1 6968 3489 10 ENSG00000211566.2 AC114788.1 chr2 238972928 238973010 - miRNA NOVEL NA 83 83 1 ENSG00000068024.15 HDAC4 chr2 239048168 239401654 - protein_coding KNOWN OTTHUMG00000133344.6 353487 13368 154 ENSG00000266109.1 MIR4440 chr2 239068817 239068914 - miRNA KNOWN NA 98 98 1 ENSG00000280528.1 AC017028.11 chr2 239068919 239069012 - miRNA NOVEL NA 94 94 1 ENSG00000265332.1 AC017028.5 chr2 239068968 239069061 - miRNA NOVEL NA 94 94 1 ENSG00000130770.16 ATPIF1 chr1 28236109 28246906 + protein_coding KNOWN OTTHUMG00000003533.2 10798 2225 11 ENSG00000266360.1 AC017028.9 chr2 239069066 239069159 - miRNA NOVEL NA 94 94 1 ENSG00000263743.1 AC017028.1 chr2 239069164 239069257 - miRNA NOVEL NA 94 94 1 ENSG00000264103.1 AC017028.2 chr2 239069360 239069453 - miRNA NOVEL NA 94 94 1 ENSG00000264518.1 AC017028.3 chr2 239069458 239069551 - miRNA NOVEL NA 94 94 1 ENSG00000265979.1 AC017028.8 chr2 239069605 239069698 - miRNA NOVEL NA 94 94 1 ENSG00000264730.1 AC017028.4 chr2 239069752 239069845 - miRNA NOVEL NA 94 94 1 ENSG00000265891.1 AC017028.7 chr2 239085698 239085796 - miRNA NOVEL NA 99 99 1 ENSG00000264810.1 MIR4441 chr2 239085827 239085926 - miRNA KNOWN NA 100 100 1 ENSG00000265416.1 AC017028.6 chr2 239086343 239086442 - miRNA NOVEL NA 100 100 1 ENSG00000281838.1 AC017028.12 chr2 239091759 239091836 - miRNA NOVEL NA 78 78 1 ENSG00000270605.1 RP5-1092A3.4 chr1 28239509 28241453 - antisense NOVEL OTTHUMG00000185161.1 1945 1945 1 ENSG00000280260.1 AC017028.10 chr2 239161797 239162357 - protein_coding KNOWN NA 561 264 2 ENSG00000265215.1 MIR4269 chr2 239305462 239305545 + miRNA KNOWN NA 84 84 1 ENSG00000264292.1 MIR2467 chr2 239351724 239351804 - miRNA KNOWN NA 81 81 1 ENSG00000222020.2 AC062017.1 chr2 239401436 239402364 + antisense NOVEL OTTHUMG00000152658.1 929 613 6 ENSG00000196758.3 AC079612.1 chr2 239578301 239586094 + lincRNA NOVEL OTTHUMG00000133345.2 7794 3700 2 ENSG00000227459.1 AC079612.2 chr2 239625698 239630839 + lincRNA NOVEL OTTHUMG00000152416.1 5142 348 2 ENSG00000259889.1 RP11-315F22.1 chr2 239734956 239735538 + lincRNA KNOWN OTTHUMG00000176304.1 583 583 1 ENSG00000220256.3 AC093802.1 chr2 239762860 239802883 + lincRNA KNOWN OTTHUMG00000152415.1 40024 3238 3 ENSG00000130414.10 NDUFA10 chr2 239892450 240025402 - protein_coding KNOWN OTTHUMG00000133350.3 132953 9517 93 ENSG00000264279.1 MIR4786 chr2 239943015 239943094 - miRNA KNOWN NA 80 80 1 ENSG00000271398.1 RP5-1092A3.5 chr1 28247144 28247568 + lincRNA NOVEL OTTHUMG00000185179.1 425 425 1 ENSG00000182083.7 OR6B2 chr2 240028965 240030456 - protein_coding KNOWN OTTHUMG00000152400.1 1492 1492 1 ENSG00000221961.3 PRR21 chr2 240041813 240042982 - protein_coding KNOWN OTTHUMG00000159174.2 1170 1170 1 ENSG00000178586.4 OR6B3 chr2 240045077 240046072 - protein_coding KNOWN OTTHUMG00000152399.1 996 996 1 ENSG00000231278.1 OR9S24P chr2 240079433 240080362 + unprocessed_pseudogene KNOWN OTTHUMG00000152395.1 930 403 2 ENSG00000213048.3 OR5S1P chr2 240109102 240110052 + unitary_pseudogene KNOWN OTTHUMG00000152396.1 951 951 1 ENSG00000172428.9 MYEOV2 chr2 240126563 240136807 - protein_coding KNOWN OTTHUMG00000133352.3 10245 2039 15 ENSG00000178602.6 OTOS chr2 240139026 240144562 - protein_coding KNOWN OTTHUMG00000133351.4 5537 645 9 ENSG00000227479.1 AC124861.1 chr2 240227560 240256035 - lincRNA NOVEL OTTHUMG00000152377.1 28476 429 3 ENSG00000221412.1 AC124861.2 chr2 240261715 240261860 - miRNA NOVEL NA 146 146 1 ENSG00000276366.1 U3 chr2 240289216 240289443 + snoRNA NOVEL NA 228 228 1 ENSG00000130766.4 SESN2 chr1 28259527 28282491 + protein_coding KNOWN OTTHUMG00000003532.1 22965 3453 10 ENSG00000063660.7 GPC1 chr2 240435671 240468078 + protein_coding KNOWN OTTHUMG00000133349.5 32408 6516 54 ENSG00000218416.4 PP14571 chr2 240449315 240456714 - processed_transcript NOVEL OTTHUMG00000152371.2 7400 3235 8 ENSG00000207611.1 MIR149 chr2 240456001 240456089 + miRNA KNOWN NA 89 89 1 ENSG00000144504.14 ANKMY1 chr2 240479422 240569209 - protein_coding KNOWN OTTHUMG00000133355.8 89788 11477 177 ENSG00000188542.8 DUSP28 chr2 240560054 240564014 + protein_coding KNOWN OTTHUMG00000152310.1 3961 3709 12 ENSG00000142327.10 RNPEPL1 chr2 240565804 240581372 + protein_coding KNOWN OTTHUMG00000133357.4 15569 7767 50 ENSG00000260942.1 CAPN10-AS1 chr2 240582700 240586699 - antisense NOVEL OTTHUMG00000170676.1 4000 4000 1 ENSG00000142330.18 CAPN10 chr2 240586716 240617705 + protein_coding KNOWN OTTHUMG00000133358.4 30990 7474 116 ENSG00000178623.10 GPR35 chr2 240605431 240631259 + protein_coding KNOWN OTTHUMG00000133356.3 25829 5089 17 ENSG00000276949.1 RP11-118M12.1 chr2 240672530 240672812 + processed_pseudogene KNOWN OTTHUMG00000187716.1 283 283 1 ENSG00000130772.12 MED18 chr1 28329002 28335967 + protein_coding KNOWN OTTHUMG00000003537.2 6966 2019 15 ENSG00000185176.11 AQP12B chr2 240676418 240682906 - protein_coding KNOWN OTTHUMG00000152263.1 6489 3303 23 ENSG00000219159.4 AC011298.2 chr2 240686334 240690414 + lincRNA NOVEL OTTHUMG00000152264.2 4081 3398 3 ENSG00000184945.12 AQP12A chr2 240691845 240698483 + protein_coding KNOWN OTTHUMG00000183906.1 6639 1742 16 ENSG00000274977.1 RP11-118M12.2 chr2 240701204 240701685 - processed_pseudogene KNOWN OTTHUMG00000187720.1 482 482 1 ENSG00000130294.13 KIF1A chr2 240713764 240820308 - protein_coding KNOWN OTTHUMG00000151940.4 106545 12357 198 ENSG00000172482.4 AGXT chr2 240868479 240880502 + protein_coding KNOWN OTTHUMG00000133354.2 12024 4459 23 ENSG00000172478.16 C2orf54 chr2 240886048 240896889 - protein_coding KNOWN OTTHUMG00000151906.2 10842 2772 19 ENSG00000226321.5 AC104809.3 chr2 240906330 240993311 + protein_coding NOVEL OTTHUMG00000151855.4 86982 5978 36 ENSG00000233392.4 AC104809.4 chr2 240954617 240967451 - processed_transcript NOVEL OTTHUMG00000151847.3 12835 2656 16 ENSG00000223991.1 AC104809.2 chr2 240981515 240986072 - antisense NOVEL OTTHUMG00000151846.1 4558 2345 2 ENSG00000078808.15 SDF4 chr1 1216908 1232031 - protein_coding KNOWN OTTHUMG00000001812.5 15124 4709 34 ENSG00000204138.11 PHACTR4 chr1 28369603 28500369 + protein_coding KNOWN OTTHUMG00000003541.5 130767 7165 50 ENSG00000162804.12 SNED1 chr2 240998838 241095568 + protein_coding KNOWN OTTHUMG00000151803.2 96731 13592 150 ENSG00000229996.1 AC093585.6 chr2 241010045 241010744 - antisense NOVEL OTTHUMG00000151830.1 700 428 2 ENSG00000225521.1 AC005237.4 chr2 241015599 241064116 - antisense NOVEL OTTHUMG00000151792.2 48518 559 3 ENSG00000122085.15 MTERF4 chr2 241072169 241102332 - protein_coding KNOWN OTTHUMG00000133393.7 30164 9938 89 ENSG00000115687.12 PASK chr2 241106099 241150264 - protein_coding KNOWN OTTHUMG00000133392.3 44166 10686 129 ENSG00000235861.1 AC005237.2 chr2 241118725 241118943 + processed_pseudogene KNOWN OTTHUMG00000151760.2 219 219 1 ENSG00000115685.13 PPP1R7 chr2 241149576 241183652 + protein_coding KNOWN OTTHUMG00000133390.8 34077 3781 136 ENSG00000146205.12 ANO7 chr2 241188509 241225377 + protein_coding KNOWN OTTHUMG00000151702.2 36869 5695 68 ENSG00000115677.15 HDLBP chr2 241227264 241317061 - protein_coding KNOWN OTTHUMG00000133391.7 89798 12182 333 ENSG00000266621.1 AC104841.1 chr2 241245202 241245299 - miRNA NOVEL NA 98 98 1 ENSG00000206779.1 Y_RNA chr1 28422555 28422655 - misc_RNA NOVEL NA 101 101 1 ENSG00000281551.1 snoMe28S-Am2634 chr2 241284869 241284946 + snoRNA NOVEL NA 78 78 1 ENSG00000168385.16 SEPT2 chr2 241315100 241354027 + protein_coding KNOWN OTTHUMG00000133394.11 38928 7378 295 ENSG00000223374.1 AC005104.3 chr2 241351340 241353104 - antisense NOVEL OTTHUMG00000151587.1 1765 442 2 ENSG00000006607.12 FARP2 chr2 241356243 241494841 + protein_coding KNOWN OTTHUMG00000151574.3 138599 14413 140 ENSG00000263752.1 MIR3133 chr2 241477905 241477982 + miRNA KNOWN NA 78 78 1 ENSG00000224232.1 AC110299.5 chr2 241478316 241478993 + processed_pseudogene KNOWN OTTHUMG00000151575.1 678 678 1 ENSG00000115694.13 STK25 chr2 241492674 241509730 - protein_coding KNOWN OTTHUMG00000133408.15 17057 7584 196 ENSG00000234235.1 BOK-AS1 chr2 241544403 241558977 - antisense NOVEL OTTHUMG00000151556.1 14575 643 2 ENSG00000176720.4 BOK chr2 241558721 241574138 + protein_coding KNOWN OTTHUMG00000133411.3 15418 2657 5 ENSG00000273113.1 RP11-367H1.1 chr2 241581922 241582726 + lincRNA NOVEL OTTHUMG00000186326.1 805 805 1 ENSG00000229820.2 RP1-308E4.1 chr1 28453541 28453934 + processed_pseudogene KNOWN OTTHUMG00000043619.2 394 394 1 ENSG00000176946.10 THAP4 chr2 241584405 241637449 - protein_coding KNOWN OTTHUMG00000133410.3 53045 3147 26 ENSG00000207186.1 RNA5SP122 chr2 241584968 241585075 + rRNA KNOWN NA 108 108 1 ENSG00000168397.15 ATG4B chr2 241637213 241673857 + protein_coding KNOWN OTTHUMG00000151514.15 36645 6638 185 ENSG00000168393.11 DTYMK chr2 241675742 241686991 - protein_coding KNOWN OTTHUMG00000133409.2 11250 2451 29 ENSG00000228989.1 AC133528.2 chr2 241690414 241694289 + antisense NOVEL OTTHUMG00000151513.1 3876 415 2 ENSG00000168395.13 ING5 chr2 241702035 241729478 + protein_coding KNOWN OTTHUMG00000151501.3 27444 8200 54 ENSG00000235351.1 AC114730.11 chr2 241724615 241725693 - antisense NOVEL OTTHUMG00000151506.1 1079 584 2 ENSG00000180902.15 D2HGDH chr2 241734579 241768816 + protein_coding KNOWN OTTHUMG00000151474.13 34238 5279 83 ENSG00000215692.2 AC114730.8 chr2 241734715 241735498 - antisense NOVEL OTTHUMG00000151478.1 784 472 2 ENSG00000234793.1 AC114730.7 chr2 241754793 241755740 - antisense NOVEL OTTHUMG00000151479.1 948 668 2 ENSG00000221216.1 RNU6ATAC27P chr1 28481362 28481480 + snRNA KNOWN NA 119 119 1 ENSG00000154252.11 GAL3ST2 chr2 241776825 241804208 + protein_coding KNOWN OTTHUMG00000151473.2 27384 1370 4 ENSG00000215023.2 AC114730.5 chr2 241800916 241801907 - antisense NOVEL OTTHUMG00000151472.1 992 739 2 ENSG00000224272.2 AC114730.3 chr2 241808312 241812016 - antisense NOVEL OTTHUMG00000151448.3 3705 2250 8 ENSG00000204099.10 NEU4 chr2 241808825 241817413 + protein_coding KNOWN OTTHUMG00000133412.6 8589 4689 59 ENSG00000235151.1 AC114730.2 chr2 241844380 241845036 + lincRNA NOVEL OTTHUMG00000151392.1 657 571 2 ENSG00000188389.9 PDCD1 chr2 241849881 241858908 - protein_coding KNOWN OTTHUMG00000151342.1 9028 2114 13 ENSG00000188011.5 RTP5 chr2 241869600 241873823 + protein_coding KNOWN OTTHUMG00000151341.1 4224 2606 5 ENSG00000233806.6 LINC01237 chr2 241881363 242078722 + processed_transcript NOVEL OTTHUMG00000151343.2 197360 1601 17 ENSG00000216921.6 AC131097.4 chr2 241893985 241902551 - lincRNA NOVEL OTTHUMG00000151374.2 8567 674 9 ENSG00000237940.3 AC093642.3 chr2 241970683 241977276 + lincRNA NOVEL OTTHUMG00000151373.3 6594 2854 13 ENSG00000180198.14 RCC1 chr1 28505943 28539300 + protein_coding KNOWN OTTHUMG00000003645.10 33358 3888 105 ENSG00000280119.1 AC093642.1 chr2 242001209 242006013 + TEC KNOWN OTTHUMG00000133420.2 4805 4805 1 ENSG00000226423.1 AC093642.4 chr2 242025183 242026176 - lincRNA NOVEL OTTHUMG00000151372.1 994 565 2 ENSG00000232002.1 AC093642.6 chr2 242047695 242084138 - lincRNA NOVEL OTTHUMG00000151385.1 36444 561 4 ENSG00000261186.2 RP11-341N2.1 chr2 242087351 242088457 - antisense NOVEL OTTHUMG00000176311.2 1107 1107 1 ENSG00000220804.7 AC093642.5 chr2 242088633 242160153 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000151386.5 71521 1931 37 ENSG00000224160.1 CICP10 chr2 242119856 242120053 - processed_pseudogene KNOWN OTTHUMG00000152147.1 198 198 1 ENSG00000244528.1 AC134873.1 chr2 242122287 242122469 + processed_pseudogene KNOWN OTTHUMG00000152146.1 183 183 1 ENSG00000271153.1 ABC7-43041300I9.1 chr2 242175181 242175634 + processed_pseudogene KNOWN OTTHUMG00000184343.1 454 454 1 ENSG00000223587.1 AY269186.1 chr3 23757 24501 + lincRNA NOVEL OTTHUMG00000154851.2 745 590 2 ENSG00000224918.1 AY269186.2 chr3 53348 54346 - lincRNA NOVEL OTTHUMG00000154852.1 999 399 2 ENSG00000242125.3 SNHG3 chr1 28505980 28510892 + sense_intronic KNOWN OTTHUMG00000003657.2 4913 4088 7 ENSG00000224318.4 CHL1-AS2 chr3 195758 197341 - processed_transcript NOVEL OTTHUMG00000154872.1 1584 883 13 ENSG00000134121.8 CHL1 chr3 196596 409417 + protein_coding KNOWN OTTHUMG00000090601.10 212822 11861 155 ENSG00000252017.1 RNU6-1194P chr3 282689 282792 - snRNA KNOWN NA 104 104 1 ENSG00000231660.1 RPS8P6 chr3 308714 309322 - processed_pseudogene KNOWN OTTHUMG00000157085.1 609 609 1 ENSG00000234661.2 CHL1-AS1 chr3 363370 385795 - antisense NOVEL OTTHUMG00000154873.2 22426 1149 5 ENSG00000224957.4 LINC01266 chr3 536231 846015 + lincRNA NOVEL OTTHUMG00000154876.1 309785 4075 10 ENSG00000238075.1 RPSAP32 chr3 617789 618314 - processed_pseudogene KNOWN OTTHUMG00000154877.1 526 526 1 ENSG00000224239.1 AC090044.2 chr3 857124 858091 + lincRNA NOVEL OTTHUMG00000154884.1 968 497 2 ENSG00000235158.1 AC087430.1 chr3 1008135 1012934 + lincRNA NOVEL OTTHUMG00000154883.1 4800 3699 2 ENSG00000244169.3 RN7SL120P chr3 1065580 1065875 - misc_RNA KNOWN NA 296 296 1 ENSG00000274266.1 SNORA73A chr1 28507366 28507571 + snoRNA KNOWN NA 206 206 1 ENSG00000134115.11 CNTN6 chr3 1092576 1404217 + protein_coding KNOWN OTTHUMG00000119030.2 311642 5589 81 ENSG00000232563.1 CRB3P1 chr3 1394173 1394448 - processed_pseudogene KNOWN OTTHUMG00000154882.1 276 276 1 ENSG00000184423.5 AC090043.1 chr3 1595777 1596245 - processed_pseudogene KNOWN OTTHUMG00000154860.1 469 469 1 ENSG00000214074.3 RPL23AP39 chr3 1730070 1730474 + processed_pseudogene KNOWN OTTHUMG00000154859.1 405 405 1 ENSG00000214073.2 RPL21P17 chr3 1905651 1906125 + processed_pseudogene KNOWN OTTHUMG00000154858.1 475 475 1 ENSG00000225044.1 RP11-204C23.1 chr3 1962381 1987470 - lincRNA NOVEL OTTHUMG00000156184.1 25090 357 2 ENSG00000223040.1 RN7SKP144 chr3 2088933 2089211 - misc_RNA KNOWN NA 279 279 1 ENSG00000144619.13 CNTN4 chr3 2098813 3057956 + protein_coding KNOWN OTTHUMG00000119031.10 959144 9120 177 ENSG00000227588.2 CNTN4-AS2 chr3 2110409 2144241 - lincRNA NOVEL OTTHUMG00000156185.2 33833 426 3 ENSG00000230398.1 HINT2P1 chr3 2362258 2362738 + processed_pseudogene KNOWN OTTHUMG00000154863.1 481 481 1 ENSG00000200087.1 SNORA73B chr1 28508559 28508762 + snoRNA KNOWN NA 204 204 1 ENSG00000225310.1 DNAJC19P4 chr3 2985231 2985575 - processed_pseudogene KNOWN OTTHUMG00000154879.1 345 345 1 ENSG00000237990.3 CNTN4-AS1 chr3 3039033 3069242 - antisense NOVEL OTTHUMG00000154875.4 30210 2078 8 ENSG00000091181.18 IL5RA chr3 3066326 3126613 - protein_coding KNOWN OTTHUMG00000090245.5 60288 6600 101 ENSG00000253049.1 SNORA43 chr3 3102913 3103015 + snoRNA NOVEL NA 103 103 1 ENSG00000072756.15 TRNT1 chr3 3126916 3150879 + protein_coding KNOWN OTTHUMG00000090259.10 23964 5518 50 ENSG00000281584.1 AC024060.1 chr3 3145453 3145614 - protein_coding NOVEL NA 162 63 2 ENSG00000113851.12 CRBN chr3 3148992 3179710 - protein_coding KNOWN OTTHUMG00000090261.6 30719 7163 75 ENSG00000271870.1 RP11-97C16.1 chr3 3152942 3153435 + antisense NOVEL OTTHUMG00000185398.1 494 494 1 ENSG00000223727.5 AC026188.1 chr3 3250687 3627296 - lincRNA NOVEL OTTHUMG00000154935.6 376610 1337 15 ENSG00000223036.1 AC024158.1 chr3 3646456 3646578 + miRNA NOVEL NA 123 123 1 ENSG00000231468.2 PRDX3P2 chr1 28526318 28527227 - processed_pseudogene KNOWN OTTHUMG00000003652.2 910 611 2 ENSG00000144455.12 SUMF1 chr3 3700814 4467281 - protein_coding KNOWN OTTHUMG00000090269.5 766468 6952 55 ENSG00000175928.5 LRRN1 chr3 3799437 3847703 + protein_coding KNOWN OTTHUMG00000154934.2 48267 4264 7 ENSG00000229241.1 PNPT1P1 chr3 3981981 3984295 - processed_pseudogene KNOWN OTTHUMG00000155238.1 2315 2315 1 ENSG00000170364.11 SETMAR chr3 4303304 4317567 + protein_coding KNOWN OTTHUMG00000090265.8 14264 3567 23 ENSG00000234325.1 MRPS10P2 chr3 4414580 4414960 - processed_pseudogene KNOWN OTTHUMG00000154995.1 381 381 1 ENSG00000231249.1 ITPR1-AS1 chr3 4490891 4493163 - antisense NOVEL OTTHUMG00000154994.1 2273 858 2 ENSG00000150995.16 ITPR1 chr3 4493348 4847840 + protein_coding KNOWN OTTHUMG00000154996.6 354493 12895 396 ENSG00000235947.1 EGOT chr3 4749192 4751590 - lincRNA KNOWN OTTHUMG00000156235.2 2399 1464 2 ENSG00000275981.1 EGOT chr3 4750333 4750685 + misc_RNA NOVEL NA 353 353 1 ENSG00000281217.1 AC018816.1 chr3 4782053 4782149 + miRNA NOVEL NA 97 97 1 ENSG00000279443.1 RP4-669K10.8 chr1 28544460 28546542 + TEC KNOWN OTTHUMG00000175791.1 2083 2083 1 ENSG00000235978.5 AC018816.3 chr3 4814294 4887293 - antisense NOVEL OTTHUMG00000155240.1 73000 1251 24 ENSG00000235831.5 BHLHE40-AS1 chr3 4896809 4979961 - antisense NOVEL OTTHUMG00000155242.2 83153 2717 13 ENSG00000134107.4 BHLHE40 chr3 4979116 4985323 + protein_coding KNOWN OTTHUMG00000119035.2 6208 3837 11 ENSG00000230182.1 RNF10P1 chr3 5068676 5069044 - processed_pseudogene KNOWN OTTHUMG00000155237.1 369 369 1 ENSG00000224082.1 UBTFL8 chr3 5080212 5084429 - unprocessed_pseudogene KNOWN OTTHUMG00000155239.2 4218 2112 6 ENSG00000207283.1 Y_RNA chr3 5086178 5086279 - misc_RNA NOVEL NA 102 102 1 ENSG00000237566.1 AC090955.5 chr3 5099627 5099861 + processed_pseudogene KNOWN OTTHUMG00000155241.1 235 235 1 ENSG00000134108.11 ARL8B chr3 5122220 5180912 + protein_coding KNOWN OTTHUMG00000090463.4 58693 3576 39 ENSG00000233912.1 AC026202.3 chr3 5156905 5187329 - antisense NOVEL OTTHUMG00000154898.1 30425 672 4 ENSG00000268509.2 RP11-572B2.1 chr3 5187172 5188298 - antisense NOVEL OTTHUMG00000187143.1 1127 1127 1 ENSG00000176022.4 B3GALT6 chr1 1232265 1235041 + protein_coding KNOWN OTTHUMG00000001813.1 2777 2777 1 ENSG00000180098.8 TRNAU1AP chr1 28553085 28578545 + protein_coding KNOWN OTTHUMG00000003653.2 25461 4311 58 ENSG00000134109.9 EDEM1 chr3 5187646 5219957 + protein_coding KNOWN OTTHUMG00000154896.3 32312 6758 47 ENSG00000265180.1 MIR4790 chr3 5250177 5250255 - miRNA KNOWN NA 79 79 1 ENSG00000241227.3 RN7SL553P chr3 5252926 5253223 - misc_RNA KNOWN NA 298 298 1 ENSG00000230944.1 AC026202.5 chr3 5255535 5256761 - lincRNA NOVEL OTTHUMG00000154903.1 1227 585 2 ENSG00000229642.1 AC027119.1 chr3 5962842 6124120 + lincRNA NOVEL OTTHUMG00000154907.1 161279 467 3 ENSG00000226022.1 AC026167.1 chr3 6148484 6365885 + lincRNA NOVEL OTTHUMG00000154909.1 217402 299 3 ENSG00000232958.1 AC091069.1 chr3 6208269 6208571 + unprocessed_pseudogene KNOWN OTTHUMG00000154906.1 303 241 2 ENSG00000189229.10 AC069277.2 chr3 6490479 6736129 + lincRNA NOVEL OTTHUMG00000154923.2 245651 3023 14 ENSG00000226258.5 GRM7-AS3 chr3 6631689 6805449 - lincRNA NOVEL OTTHUMG00000154912.5 173761 2974 31 ENSG00000223719.1 AC024162.2 chr3 6692319 6693088 + processed_pseudogene KNOWN OTTHUMG00000154925.1 770 432 2 ENSG00000197989.12 SNHG12 chr1 28578538 28582983 - antisense KNOWN OTTHUMG00000003654.2 4446 3377 54 ENSG00000196277.14 GRM7 chr3 6770001 7741533 + protein_coding KNOWN OTTHUMG00000125549.14 971533 8214 115 ENSG00000236152.1 MRPS36P1 chr3 6773037 6773343 - processed_pseudogene KNOWN OTTHUMG00000154924.1 307 307 1 ENSG00000237665.1 GRM7-AS2 chr3 6892632 6894022 - antisense NOVEL OTTHUMG00000154931.1 1391 520 2 ENSG00000236202.1 GRM7-AS1 chr3 7519741 7560333 - antisense NOVEL OTTHUMG00000154932.1 40593 507 5 ENSG00000270207.1 RP11-157E16.1 chr3 7606890 7607897 - antisense NOVEL OTTHUMG00000185123.1 1008 1008 1 ENSG00000227110.5 LMCD1-AS1 chr3 7952805 8611924 - antisense NOVEL OTTHUMG00000154968.1 659120 6458 28 ENSG00000266293.1 AC069276.1 chr3 8006477 8006561 - miRNA NOVEL NA 85 85 1 ENSG00000228351.1 AC018832.1 chr3 8079322 8112924 + lincRNA NOVEL OTTHUMG00000154970.1 33603 566 6 ENSG00000253081.1 RNU4ATAC17P chr3 8364529 8364648 - snRNA KNOWN NA 120 120 1 ENSG00000231401.1 AC023481.1 chr3 8364707 8366392 - lincRNA NOVEL OTTHUMG00000154972.1 1686 938 3 ENSG00000221539.1 SNORD99 chr1 28578749 28578822 - snoRNA KNOWN NA 74 74 1 ENSG00000071282.10 LMCD1 chr3 8501707 8574673 + protein_coding KNOWN OTTHUMG00000154971.3 72967 9955 43 ENSG00000224884.1 AC034187.2 chr3 8573726 8593124 - lincRNA NOVEL OTTHUMG00000154969.1 19399 561 2 ENSG00000125046.13 SSUH2 chr3 8619400 8745040 - protein_coding KNOWN OTTHUMG00000122075.4 125641 6279 167 ENSG00000215160.2 OR7E122P chr3 8688143 8689159 + unprocessed_pseudogene KNOWN OTTHUMG00000155006.1 1017 1017 1 ENSG00000265330.1 AC034187.4 chr3 8695314 8695390 + miRNA NOVEL NA 77 77 1 ENSG00000264097.1 AC034187.1 chr3 8696049 8696117 - miRNA NOVEL NA 69 69 1 ENSG00000266275.1 AC034187.5 chr3 8696177 8696256 + miRNA NOVEL NA 80 80 1 ENSG00000265169.1 AC034187.3 chr3 8700011 8700098 + miRNA NOVEL NA 88 88 1 ENSG00000182533.6 CAV3 chr3 8733800 8841808 + protein_coding KNOWN OTTHUMG00000090519.3 108009 1956 8 ENSG00000180914.9 OXTR chr3 8750408 8769628 - protein_coding KNOWN OTTHUMG00000090537.2 19221 4514 11 ENSG00000278274.1 SNORA61 chr1 28579764 28579893 - snoRNA KNOWN NA 130 130 1 ENSG00000266778.1 AC068312.1 chr3 8771191 8771287 + miRNA NOVEL NA 97 97 1 ENSG00000070950.8 RAD18 chr3 8775402 8963773 - protein_coding KNOWN OTTHUMG00000090545.4 188372 6983 60 ENSG00000281863.1 SNORA43 chr3 8931495 8931632 + snoRNA NOVEL NA 138 138 1 ENSG00000199815.2 SNORA17 chr3 8931506 8931631 + snoRNA NOVEL NA 126 126 1 ENSG00000196220.14 SRGAP3 chr3 8980591 9363053 - protein_coding KNOWN OTTHUMG00000090589.11 382463 18924 124 ENSG00000224808.1 SRGAP3-AS1 chr3 9014123 9015979 + antisense NOVEL OTTHUMG00000155031.1 1857 428 2 ENSG00000228723.5 SRGAP3-AS2 chr3 9192493 9194453 + antisense NOVEL OTTHUMG00000155019.4 1961 1439 14 ENSG00000227929.3 SRGAP3-AS3 chr3 9216895 9218087 + antisense NOVEL OTTHUMG00000155028.1 1193 567 3 ENSG00000235830.1 SRGAP3-AS4 chr3 9256759 9257507 + lincRNA NOVEL OTTHUMG00000155030.1 749 377 2 ENSG00000254485.4 RP11-380O24.1 chr3 9292588 9363303 - antisense NOVEL OTTHUMG00000165687.1 70716 1649 13 ENSG00000273544.1 SNORA44 chr1 28580381 28580512 - snoRNA KNOWN NA 132 132 1 ENSG00000214041.4 PGAM1P4 chr3 9348443 9349192 + processed_pseudogene KNOWN OTTHUMG00000155029.1 750 750 1 ENSG00000206573.7 THUMPD3-AS1 chr3 9349689 9398579 - antisense NOVEL OTTHUMG00000164357.4 48891 6275 64 ENSG00000134077.14 THUMPD3 chr3 9362842 9386791 + protein_coding KNOWN OTTHUMG00000097031.5 23950 5365 55 ENSG00000168137.14 SETD5 chr3 9397615 9479240 + protein_coding KNOWN OTTHUMG00000150491.5 81626 10808 257 ENSG00000156959.8 LHFPL4 chr3 9498361 9553802 - protein_coding KNOWN OTTHUMG00000155066.2 55442 5329 8 ENSG00000235338.1 DUSP5P2 chr3 9600748 9602728 + processed_pseudogene KNOWN OTTHUMG00000155065.1 1981 1033 3 ENSG00000163719.17 MTMR14 chr3 9649433 9702394 + protein_coding KNOWN OTTHUMG00000155111.3 52962 6020 151 ENSG00000144550.11 CPNE9 chr3 9703807 9729908 + protein_coding KNOWN OTTHUMG00000128418.4 26102 2335 72 ENSG00000156983.14 BRPF1 chr3 9731729 9748018 + protein_coding KNOWN OTTHUMG00000097033.3 16290 5477 65 ENSG00000114026.20 OGG1 chr3 9749944 9788219 + protein_coding KNOWN OTTHUMG00000097091.10 38276 8733 84 ENSG00000274582.1 SNORA16A chr1 28580920 28581056 - snoRNA NOVEL NA 137 137 1 ENSG00000134072.9 CAMK1 chr3 9757342 9769992 - protein_coding KNOWN OTTHUMG00000128419.2 12651 2720 40 ENSG00000171148.12 TADA3 chr3 9779860 9793011 - protein_coding KNOWN OTTHUMG00000128440.3 13152 4234 37 ENSG00000241553.11 ARPC4 chr3 9792495 9807726 + protein_coding KNOWN OTTHUMG00000133768.5 15232 3608 44 ENSG00000250151.8 ARPC4-TTLL3 chr3 9793082 9835401 + protein_coding KNOWN OTTHUMG00000161408.2 42320 2765 29 ENSG00000214021.14 TTLL3 chr3 9808086 9855138 + protein_coding KNOWN OTTHUMG00000128439.12 47053 10365 192 ENSG00000269886.1 RP11-266J6.2 chr3 9812762 9813097 - antisense NOVEL OTTHUMG00000183937.1 336 336 1 ENSG00000156990.13 RPUSD3 chr3 9837849 9844602 - protein_coding KNOWN OTTHUMG00000128441.5 6754 5348 79 ENSG00000187288.9 CIDEC chr3 9866711 9880254 - protein_coding KNOWN OTTHUMG00000128522.4 13544 1926 40 ENSG00000171135.12 JAGN1 chr3 9890554 9894349 + protein_coding KNOWN OTTHUMG00000128523.2 3796 1799 9 ENSG00000163701.17 IL17RE chr3 9902612 9916402 + protein_coding KNOWN OTTHUMG00000128649.3 13791 4676 106 ENSG00000280498.1 SNORA16A chr1 28580920 28581054 - snoRNA KNOWN NA 135 135 1 ENSG00000163702.17 IL17RC chr3 9917074 9933630 + protein_coding KNOWN OTTHUMG00000128648.39 16557 4540 321 ENSG00000212327.1 RNU6-882P chr3 9919051 9919153 - snRNA KNOWN NA 103 103 1 ENSG00000163703.16 CRELD1 chr3 9933822 9945413 + protein_coding KNOWN OTTHUMG00000128653.3 11592 3778 71 ENSG00000269894.1 RP11-1020A11.1 chr3 9935706 9936258 + sense_intronic NOVEL OTTHUMG00000183938.1 553 553 1 ENSG00000163704.10 PRRT3 chr3 9945542 9952394 - protein_coding KNOWN OTTHUMG00000155285.2 6853 3939 12 ENSG00000230082.1 PRRT3-AS1 chr3 9947404 9954787 + antisense NOVEL OTTHUMG00000155293.2 7384 614 4 ENSG00000269982.1 RP11-1020A11.2 chr3 9958717 9962539 + antisense NOVEL OTTHUMG00000183939.1 3823 3823 1 ENSG00000125037.11 EMC3 chr3 9962537 10011116 - protein_coding KNOWN OTTHUMG00000128652.4 48580 4270 32 ENSG00000180385.7 EMC3-AS1 chr3 9986893 10006990 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155324.2 20098 3714 19 ENSG00000232901.1 CYCSP10 chr3 10000647 10000940 - processed_pseudogene KNOWN OTTHUMG00000155302.1 294 294 1 ENSG00000120656.10 TAF12 chr1 28589323 28643085 - protein_coding KNOWN OTTHUMG00000003655.1 53763 2337 22 ENSG00000206567.8 AC022007.5 chr3 10006418 10011209 - lincRNA NOVEL OTTHUMG00000155325.3 4792 2533 19 ENSG00000186162.9 CIDECP chr3 10014238 10026365 - transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155323.5 12128 3017 16 ENSG00000144554.9 FANCD2 chr3 10026414 10101930 + protein_coding KNOWN OTTHUMG00000128670.3 75517 8378 200 ENSG00000201182.1 RNU6-670P chr3 10037552 10037655 + snRNA KNOWN NA 104 104 1 ENSG00000229217.1 CYCSP11 chr3 10057973 10058287 - processed_pseudogene KNOWN OTTHUMG00000155399.1 315 315 1 ENSG00000163705.11 FANCD2OS chr3 10081317 10108231 - protein_coding KNOWN OTTHUMG00000128669.3 26915 1895 18 ENSG00000254999.3 BRK1 chr3 10115592 10127190 + protein_coding KNOWN OTTHUMG00000155400.2 11599 1233 3 ENSG00000134086.7 VHL chr3 10141008 10152220 + protein_coding KNOWN OTTHUMG00000128668.2 11213 4213 8 ENSG00000134070.4 IRAK2 chr3 10164865 10243743 + protein_coding KNOWN OTTHUMG00000155358.1 78879 3483 13 ENSG00000280637.1 U6 chr3 10217212 10217319 + snRNA NOVEL NA 108 108 1 ENSG00000188060.6 RAB42 chr1 28592200 28595443 + protein_coding KNOWN OTTHUMG00000003656.1 3244 2180 4 ENSG00000157014.9 TATDN2 chr3 10248023 10281218 + protein_coding KNOWN OTTHUMG00000155361.1 33196 5572 25 ENSG00000272410.4 RP11-438J1.1 chr3 10249372 10285796 + protein_coding NOVEL OTTHUMG00000185357.1 36425 2977 16 ENSG00000273665.1 AC022384.2 chr3 10278938 10279024 - miRNA NOVEL NA 87 87 1 ENSG00000231177.4 LINC00852 chr3 10284419 10285746 + antisense KNOWN OTTHUMG00000155362.1 1328 1328 2 ENSG00000157017.14 GHRL chr3 10285675 10292947 - protein_coding KNOWN OTTHUMG00000155360.3 7273 2064 65 ENSG00000240288.6 GHRLOS chr3 10285754 10293449 + antisense KNOWN OTTHUMG00000155359.3 7696 1712 12 ENSG00000276678.1 GHRLOS chr3 10287413 10287482 + misc_RNA NOVEL NA 70 70 1 ENSG00000157020.16 SEC13 chr3 10293131 10321178 - protein_coding KNOWN OTTHUMG00000128671.7 28048 5446 101 ENSG00000157087.15 ATP2B2 chr3 10324023 10708031 - protein_coding KNOWN OTTHUMG00000128679.6 384009 10165 139 ENSG00000264534.2 AC022384.1 chr3 10330192 10330300 + miRNA NOVEL NA 109 109 1 ENSG00000229388.1 RP11-442N24__B.1 chr1 28643228 28648581 + lincRNA NOVEL OTTHUMG00000003649.1 5354 978 4 ENSG00000216135.2 MIR885 chr3 10394481 10394540 - miRNA KNOWN NA 60 60 1 ENSG00000239167.1 AC090841.1 chr3 10481963 10482025 + miRNA NOVEL NA 63 63 1 ENSG00000236999.1 ATP2B2-IT1 chr3 10566255 10570375 - sense_intronic NOVEL OTTHUMG00000140094.1 4121 472 2 ENSG00000224771.1 ATP2B2-IT2 chr3 10626021 10626807 - sense_intronic NOVEL OTTHUMG00000140095.2 787 507 2 ENSG00000226567.1 LINC00606 chr3 10759484 10764192 - lincRNA NOVEL OTTHUMG00000155455.1 4709 2960 6 ENSG00000230599.2 AC018495.3 chr3 10767464 10771718 + lincRNA NOVEL OTTHUMG00000155454.2 4255 452 2 ENSG00000132164.8 SLC6A11 chr3 10816200 10940733 + protein_coding KNOWN OTTHUMG00000129718.2 124534 6700 20 ENSG00000157103.9 SLC6A1 chr3 10992724 11039247 + protein_coding KNOWN OTTHUMG00000044208.3 46524 4904 30 ENSG00000232287.2 SLC6A1-AS1 chr3 11006098 11019224 - antisense NOVEL OTTHUMG00000155456.2 13127 584 3 ENSG00000196639.6 HRH1 chr3 11137093 11263557 + protein_coding KNOWN OTTHUMG00000129719.3 126465 5546 9 ENSG00000184163.3 FAM132A chr1 1242446 1246722 - protein_coding KNOWN OTTHUMG00000001412.6 4277 1794 18 ENSG00000274978.1 RNU11 chr1 28648600 28648733 + snRNA KNOWN NA 134 134 1 ENSG00000213964.3 CHCHD4P4 chr3 11234256 11234582 - processed_pseudogene KNOWN OTTHUMG00000155252.1 327 327 1 ENSG00000197548.11 ATG7 chr3 11272309 11557665 + protein_coding KNOWN OTTHUMG00000129740.20 285357 8833 150 ENSG00000226621.1 AC083855.5 chr3 11290406 11290663 - processed_pseudogene KNOWN OTTHUMG00000155251.1 258 258 1 ENSG00000235240.1 AC026185.1 chr3 11488300 11488473 - processed_pseudogene KNOWN OTTHUMG00000155250.1 174 174 1 ENSG00000270531.1 RP11-169K17.2 chr3 11529488 11529755 - processed_pseudogene KNOWN OTTHUMG00000184402.1 268 268 1 ENSG00000144560.12 VGLL4 chr3 11556070 11771350 - protein_coding KNOWN OTTHUMG00000129739.19 215281 7207 81 ENSG00000271716.1 RP11-169K17.4 chr3 11607184 11610748 + antisense NOVEL OTTHUMG00000185400.1 3565 580 2 ENSG00000272483.1 RP11-169K17.3 chr3 11611602 11612197 + antisense NOVEL OTTHUMG00000185401.1 596 596 1 ENSG00000144559.9 TAMM41 chr3 11790442 11846919 - protein_coding KNOWN OTTHUMG00000129741.4 56478 5925 61 ENSG00000230342.2 FANCD2P2 chr3 11859674 11891172 + unprocessed_pseudogene KNOWN OTTHUMG00000155298.1 31499 1400 14 ENSG00000270103.3 RNU11 chr1 28648600 28648730 + lincRNA KNOWN OTTHUMG00000183994.1 131 131 1 ENSG00000224263.1 CYCSP12 chr3 11878830 11879129 - processed_pseudogene KNOWN OTTHUMG00000155299.1 300 300 1 ENSG00000225275.4 NUP210P2 chr3 11900011 11901245 + unprocessed_pseudogene KNOWN OTTHUMG00000155295.1 1235 282 2 ENSG00000231897.1 MARK2P14 chr3 11906527 11912313 + unprocessed_pseudogene KNOWN OTTHUMG00000155297.1 5787 628 3 ENSG00000251038.1 AC090958.5 chr3 11909634 11910765 - unprocessed_pseudogene KNOWN OTTHUMG00000155294.1 1132 351 3 ENSG00000263988.2 RN7SL147P chr3 11952788 11953085 - misc_RNA KNOWN NA 298 298 1 ENSG00000157152.15 SYN2 chr3 12004402 12191400 + protein_coding KNOWN OTTHUMG00000155335.9 186999 5683 51 ENSG00000226642.1 ACTG1P12 chr3 12070195 12071360 + processed_pseudogene KNOWN OTTHUMG00000155334.1 1166 1166 1 ENSG00000265870.1 AC026166.1 chr3 12071038 12071121 + miRNA NOVEL NA 84 84 1 ENSG00000157150.4 TIMP4 chr3 12153051 12159351 - protein_coding KNOWN OTTHUMG00000129763.1 6301 1650 5 ENSG00000233026.1 MTCO1P5 chr3 12165299 12165642 - processed_pseudogene KNOWN OTTHUMG00000155369.1 344 344 1 ENSG00000162419.11 GMEB1 chr1 28668732 28719353 + protein_coding KNOWN OTTHUMG00000003647.2 50622 6459 39 ENSG00000236062.1 GSTM5P1 chr3 12257801 12258460 - processed_pseudogene KNOWN OTTHUMG00000155336.1 660 660 1 ENSG00000132170.18 PPARG chr3 12287368 12434356 + protein_coding KNOWN OTTHUMG00000129764.8 146989 4046 87 ENSG00000225026.1 AC091492.2 chr3 12328003 12328274 + processed_pseudogene KNOWN OTTHUMG00000155337.1 272 272 1 ENSG00000281346.1 Metazoa_SRP chr3 12403193 12403513 - misc_RNA NOVEL NA 321 321 1 ENSG00000154743.16 TSEN2 chr3 12484432 12539623 + protein_coding KNOWN OTTHUMG00000129765.20 55192 5667 88 ENSG00000200114.1 RNA5SP123 chr3 12511095 12511213 - rRNA KNOWN NA 119 119 1 ENSG00000251774.1 RNU6-377P chr3 12514706 12514807 + snRNA KNOWN NA 102 102 1 ENSG00000225526.4 MKRN2OS chr3 12514934 12561059 - protein_coding KNOWN OTTHUMG00000155368.9 46126 1829 15 ENSG00000075975.14 MKRN2 chr3 12557014 12583713 + protein_coding KNOWN OTTHUMG00000155371.2 26700 2848 23 ENSG00000274514.1 Metazoa_SRP chr3 12576961 12577237 - misc_RNA NOVEL NA 277 277 1 ENSG00000252777.1 SCARNA24 chr1 28689665 28689794 + scaRNA NOVEL NA 130 130 1 ENSG00000132155.10 RAF1 chr3 12583601 12664226 - protein_coding KNOWN OTTHUMG00000129789.7 80626 7847 97 ENSG00000233252.1 CRIP1P1 chr3 12673699 12673883 + processed_pseudogene KNOWN OTTHUMG00000155339.1 185 185 1 ENSG00000088726.14 TMEM40 chr3 12733525 12769457 - protein_coding KNOWN OTTHUMG00000129801.3 35933 3562 66 ENSG00000213943.3 KRT18P17 chr3 12787393 12788671 - processed_pseudogene KNOWN OTTHUMG00000155395.1 1279 1279 1 ENSG00000144712.10 CAND2 chr3 12796472 12871916 + protein_coding KNOWN OTTHUMG00000155397.4 75445 5478 42 ENSG00000272263.1 RP11-767C1.2 chr3 12832219 12832728 - antisense NOVEL OTTHUMG00000185403.1 510 510 1 ENSG00000144713.11 RPL32 chr3 12834485 12841588 - protein_coding KNOWN OTTHUMG00000129804.3 7104 3720 29 ENSG00000281117.1 AC034198.1 chr3 12840294 12840396 - miRNA NOVEL NA 103 103 1 ENSG00000207496.1 SNORA7A chr3 12840312 12840450 - snoRNA KNOWN NA 139 139 1 ENSG00000250939.2 AC034198.7 chr3 12850659 12850860 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000155396.2 202 202 1 ENSG00000198492.13 YTHDF2 chr1 28736621 28769775 + protein_coding KNOWN OTTHUMG00000003648.4 33155 3859 43 ENSG00000232746.1 RP11-767C1.1 chr3 12877522 12885211 - lincRNA NOVEL OTTHUMG00000155439.3 7690 635 3 ENSG00000144711.12 IQSEC1 chr3 12897220 13073117 - protein_coding KNOWN OTTHUMG00000155398.5 175898 6882 46 ENSG00000231362.1 RP11-715I4.1 chr3 13052967 13053122 - processed_pseudogene KNOWN OTTHUMG00000157086.1 156 156 1 ENSG00000132182.10 NUP210 chr3 13316235 13420309 - protein_coding KNOWN OTTHUMG00000157268.2 104075 8182 67 ENSG00000238138.1 AC027124.3 chr3 13460294 13460398 - processed_pseudogene KNOWN OTTHUMG00000155440.1 105 105 1 ENSG00000223398.1 AC027124.2 chr3 13460424 13460889 - processed_pseudogene KNOWN OTTHUMG00000155441.1 466 466 1 ENSG00000244502.2 HDAC11-AS1 chr3 13476982 13480053 - antisense NOVEL OTTHUMG00000155438.2 3072 515 2 ENSG00000163517.13 HDAC11 chr3 13479724 13506424 + protein_coding KNOWN OTTHUMG00000129800.7 26701 5281 139 ENSG00000163520.12 FBLN2 chr3 13549131 13638422 + protein_coding KNOWN OTTHUMG00000155437.7 89292 4812 64 ENSG00000224514.2 LINC00620 chr3 13650696 13746637 + antisense NOVEL OTTHUMG00000155508.2 95942 1021 8 ENSG00000116329.9 OPRD1 chr1 28812142 28871267 + protein_coding KNOWN OTTHUMG00000003646.2 59126 9345 7 ENSG00000265457.1 AC093611.2 chr3 13717918 13718008 - miRNA NOVEL NA 91 91 1 ENSG00000238827.1 AC093611.1 chr3 13738060 13738131 - miRNA NOVEL NA 72 72 1 ENSG00000154764.5 WNT7A chr3 13816258 13880121 - protein_coding KNOWN OTTHUMG00000129803.2 63864 4579 9 ENSG00000233121.1 VN1R20P chr3 13926813 13927778 + unitary_pseudogene KNOWN OTTHUMG00000154485.1 966 966 1 ENSG00000275340.1 FGD5P1 chr3 13933056 13937477 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000160207.3 4422 3869 5 ENSG00000180438.13 TPRXL chr3 13937256 14082811 + protein_coding KNOWN OTTHUMG00000155509.4 145556 3636 44 ENSG00000224752.1 VN1R21P chr3 14089107 14089871 - unitary_pseudogene KNOWN OTTHUMG00000154484.1 765 765 1 ENSG00000163528.11 CHCHD4 chr3 14112077 14124870 - protein_coding KNOWN OTTHUMG00000129805.3 12794 1772 12 ENSG00000170876.7 TMEM43 chr3 14124940 14143679 + protein_coding KNOWN OTTHUMG00000129802.4 18740 3572 19 ENSG00000268279.3 RP11-434D12.1 chr3 14135217 14148252 + protein_coding NOVEL OTTHUMG00000182442.3 13036 1335 13 ENSG00000233427.1 RP1-212P9.3 chr1 28870483 28877336 - antisense NOVEL OTTHUMG00000003651.1 6854 1085 3 ENSG00000228242.5 AC093495.4 chr3 14144637 14165978 + antisense NOVEL OTTHUMG00000155524.6 21342 4015 57 ENSG00000154767.13 XPC chr3 14145147 14178783 - protein_coding KNOWN OTTHUMG00000155526.4 33637 4798 53 ENSG00000170860.3 LSM3 chr3 14178358 14201119 + protein_coding KNOWN OTTHUMG00000129838.4 22762 3815 4 ENSG00000255021.1 RP11-536I6.2 chr3 14272373 14303845 - lincRNA NOVEL OTTHUMG00000167094.1 31473 613 2 ENSG00000251576.1 LINC01267 chr3 14348451 14352568 - lincRNA NOVEL OTTHUMG00000167093.1 4118 2284 3 ENSG00000199609.1 RNA5SP124 chr3 14394648 14394757 + rRNA KNOWN NA 110 110 1 ENSG00000131389.15 SLC6A6 chr3 14402576 14489349 + protein_coding KNOWN OTTHUMG00000155525.5 86774 8254 83 ENSG00000144596.10 GRIP2 chr3 14489111 14542081 - protein_coding KNOWN OTTHUMG00000155544.4 52971 11704 68 ENSG00000207163.1 RNU6-905P chr3 14530982 14531088 - snRNA KNOWN NA 107 107 1 ENSG00000280472.1 AC090952.1 chr3 14535694 14535797 + miRNA NOVEL NA 104 104 1 ENSG00000199756.1 Y_RNA chr1 28881726 28881835 - misc_RNA NOVEL NA 110 110 1 ENSG00000234123.1 RHBDF1P1 chr3 14572852 14574792 - processed_pseudogene KNOWN OTTHUMG00000155546.1 1941 1941 1 ENSG00000235629.1 AC090952.5 chr3 14648194 14649432 - antisense NOVEL OTTHUMG00000155547.1 1239 446 2 ENSG00000154781.14 CCDC174 chr3 14651746 14672659 + protein_coding KNOWN OTTHUMG00000129837.2 20914 3556 48 ENSG00000131379.8 C3orf20 chr3 14675099 14773034 + protein_coding KNOWN OTTHUMG00000155545.1 97936 3492 56 ENSG00000230172.1 AC090957.2 chr3 14764952 14767440 - antisense NOVEL OTTHUMG00000155548.2 2489 1147 2 ENSG00000260902.1 RP11-95M5.1 chr3 14799331 14811414 - lincRNA NOVEL OTTHUMG00000175698.1 12084 3830 3 ENSG00000154783.9 FGD5 chr3 14818962 14934565 + protein_coding KNOWN OTTHUMG00000155556.5 115604 8046 81 ENSG00000225733.4 FGD5-AS1 chr3 14920347 14948424 - antisense NOVEL OTTHUMG00000155555.1 28078 5131 14 ENSG00000177463.14 NR2C2 chr3 14947584 15053600 + protein_coding KNOWN OTTHUMG00000129839.3 106017 11821 117 ENSG00000131368.6 MRPS25 chr3 15042460 15065335 - protein_coding KNOWN OTTHUMG00000129836.4 22876 5383 23 ENSG00000159023.17 EPB41 chr1 28887091 29120046 + protein_coding KNOWN OTTHUMG00000003644.4 232956 8287 149 ENSG00000131381.11 RBSN chr3 15070073 15099163 - protein_coding KNOWN OTTHUMG00000129860.5 29091 7921 67 ENSG00000228874.1 AC090954.5 chr3 15131848 15132208 - processed_pseudogene KNOWN OTTHUMG00000155574.1 361 361 1 ENSG00000221424.1 AC090954.1 chr3 15134383 15134530 - miRNA NOVEL NA 148 148 1 ENSG00000227578.1 RPS3AP53 chr3 15141380 15142157 + processed_pseudogene KNOWN OTTHUMG00000155576.1 778 778 1 ENSG00000230524.7 COL6A4P1 chr3 15151833 15205959 - unitary_pseudogene KNOWN OTTHUMG00000154983.2 54127 4566 26 ENSG00000273809.1 AC090954.2 chr3 15160868 15160962 - miRNA NOVEL NA 95 95 1 ENSG00000131375.8 CAPN7 chr3 15206152 15252918 + protein_coding KNOWN OTTHUMG00000129863.3 46767 5598 52 ENSG00000224660.1 SH3BP5-AS1 chr3 15254184 15264493 + antisense NOVEL OTTHUMG00000155575.2 10310 5733 8 ENSG00000131370.14 SH3BP5 chr3 15254853 15341368 - protein_coding KNOWN OTTHUMG00000129859.16 86516 4159 55 ENSG00000201162.1 RNU6-454P chr3 15339749 15339855 + snRNA KNOWN NA 107 107 1 ENSG00000225616.2 RP4-604A21.1 chr1 28982278 28982608 - processed_pseudogene KNOWN OTTHUMG00000003659.2 331 331 1 ENSG00000226427.1 HMGN2P7 chr3 15375373 15375645 - processed_pseudogene KNOWN OTTHUMG00000156873.1 273 273 1 ENSG00000206562.10 METTL6 chr3 15381275 15440566 - protein_coding KNOWN OTTHUMG00000156431.5 59292 5714 49 ENSG00000144597.12 EAF1 chr3 15427355 15450635 + protein_coding KNOWN OTTHUMG00000162544.2 23281 5152 13 ENSG00000206926.1 RNU6-1024P chr3 15433110 15433216 - snRNA KNOWN NA 107 107 1 ENSG00000249786.6 EAF1-AS1 chr3 15436171 15455940 - antisense NOVEL OTTHUMG00000129858.7 19770 4321 39 ENSG00000206561.11 COLQ chr3 15450133 15521751 - protein_coding KNOWN OTTHUMG00000156233.5 71619 4175 85 ENSG00000263573.1 MIR4270 chr3 15496239 15496308 - miRNA KNOWN NA 70 70 1 ENSG00000241064.3 RN7SL110P chr3 15506623 15506905 - misc_RNA KNOWN NA 283 283 1 ENSG00000131373.13 HACL1 chr3 15560704 15601852 - protein_coding KNOWN OTTHUMG00000129862.7 41149 3055 136 ENSG00000169814.11 BTD chr3 15601341 15645822 + protein_coding KNOWN OTTHUMG00000129861.2 44482 3704 40 ENSG00000260179.1 RP5-902P8.12 chr1 1249777 1251334 - lincRNA NOVEL OTTHUMG00000175732.1 1558 1558 1 ENSG00000206704.1 Y_RNA chr1 28985710 28985810 + misc_RNA NOVEL NA 101 101 1 ENSG00000206560.9 ANKRD28 chr3 15667236 15859771 - protein_coding KNOWN OTTHUMG00000155379.5 192536 11279 219 ENSG00000264354.1 MIR3134 chr3 15697298 15697371 - miRNA KNOWN NA 74 74 1 ENSG00000279465.1 RP11-44D5.2 chr3 15731877 15732536 + TEC KNOWN OTTHUMG00000184345.1 660 660 1 ENSG00000270409.1 RP11-44D5.1 chr3 15732252 15733470 + transcribed_unprocessed_pseudogene KNOWN OTTHUMG00000184346.1 1219 1219 3 ENSG00000263740.2 RN7SL4P chr3 15738515 15738809 + misc_RNA KNOWN NA 295 295 1 ENSG00000281814.1 AC090950.1 chr3 15738657 15738718 + miRNA NOVEL NA 62 62 1 ENSG00000207815.1 MIR563 chr3 15873771 15873849 + miRNA KNOWN NA 79 79 1 ENSG00000224728.1 AC090945.1 chr3 15878047 15879571 + processed_pseudogene KNOWN OTTHUMG00000156052.1 1525 1525 1 ENSG00000131386.16 GALNT15 chr3 16174649 16231992 + protein_coding KNOWN OTTHUMG00000156893.3 57344 5679 34 ENSG00000154813.8 DPH3 chr3 16257978 16264972 - protein_coding KNOWN OTTHUMG00000129866.2 6995 3562 11 ENSG00000277958.1 Metazoa_SRP chr1 29041199 29041480 + misc_RNA NOVEL NA 282 282 1 ENSG00000154814.12 OXNAD1 chr3 16265160 16350299 + protein_coding KNOWN OTTHUMG00000129867.4 85140 6095 69 ENSG00000270739.1 RP11-608O8.2 chr3 16275060 16276632 - processed_pseudogene KNOWN OTTHUMG00000184401.1 1573 1092 3 ENSG00000131378.12 RFTN1 chr3 16313574 16514026 - protein_coding KNOWN OTTHUMG00000156973.3 200453 4776 67 ENSG00000271964.1 RP11-415F23.2 chr3 16314439 16314987 + antisense NOVEL OTTHUMG00000185426.1 549 549 1 ENSG00000272498.1 RP11-415F23.3 chr3 16339308 16339871 + antisense NOVEL OTTHUMG00000185427.1 564 564 1 ENSG00000272529.1 RP11-415F23.4 chr3 16345126 16346440 + antisense NOVEL OTTHUMG00000185428.1 1315 551 2 ENSG00000269391.1 RP11-194G10.3 chr3 16530771 16531802 + lincRNA NOVEL OTTHUMG00000182416.1 1032 445 2 ENSG00000233570.1 LINC00690 chr3 16536320 16541373 + lincRNA NOVEL OTTHUMG00000157049.1 5054 1365 3 ENSG00000092345.12 DAZL chr3 16586792 16670306 - protein_coding KNOWN OTTHUMG00000157050.11 83515 3631 29 ENSG00000264034.1 AC010139.1 chr3 16619521 16619618 - miRNA NOVEL NA 98 98 1 ENSG00000253304.1 TMEM200B chr1 29119428 29123935 - protein_coding KNOWN OTTHUMG00000003658.3 4508 2639 4 ENSG00000229271.1 AC091493.2 chr3 16687986 16697479 - lincRNA NOVEL OTTHUMG00000155461.2 9494 411 3 ENSG00000224039.1 AC091493.1 chr3 16692745 16694202 - unprocessed_pseudogene KNOWN OTTHUMG00000155460.1 1458 1458 1 ENSG00000154822.14 PLCL2 chr3 16802651 17090594 + protein_coding KNOWN OTTHUMG00000155467.5 287944 5146 20 ENSG00000264818.1 MIR3714 chr3 16933196 16933260 + miRNA KNOWN NA 65 65 1 ENSG00000226441.2 PLCL2-AS1 chr3 17042742 17044192 - antisense NOVEL OTTHUMG00000155466.2 1451 311 2 ENSG00000252976.1 AC090644.1 chr3 17135650 17135722 - miRNA NOVEL NA 73 73 1 ENSG00000131374.13 TBC1D5 chr3 17157162 18444817 - protein_coding KNOWN OTTHUMG00000155488.18 1287656 11269 231 ENSG00000231780.1 AC090960.1 chr3 17333126 17333431 + processed_pseudogene KNOWN OTTHUMG00000155543.1 306 306 1 ENSG00000227309.1 AC140076.1 chr3 17465150 17465510 + processed_pseudogene KNOWN OTTHUMG00000155487.1 361 361 1 ENSG00000271841.1 U7 chr3 17664963 17665025 + snRNA NOVEL NA 63 63 1 ENSG00000225750.1 RP11-242O24.3 chr1 29144494 29146994 - lincRNA NOVEL OTTHUMG00000003643.1 2501 279 3 ENSG00000233133.1 AC104451.2 chr3 17706058 17706233 - unprocessed_pseudogene KNOWN OTTHUMG00000155489.1 176 176 1 ENSG00000213383.2 AC104297.1 chr3 17871729 17872598 - processed_pseudogene KNOWN OTTHUMG00000155542.1 870 870 1 ENSG00000214286.2 PDCL3P3 chr3 17877455 17878169 - processed_pseudogene KNOWN OTTHUMG00000155541.1 715 715 1 ENSG00000226238.1 AC132807.1 chr3 17990023 17995544 + lincRNA NOVEL OTTHUMG00000155317.1 5522 458 2 ENSG00000274840.3 RP11-320G10.1 chr3 18013226 18041603 + lincRNA NOVEL OTTHUMG00000189276.1 28378 339 8 ENSG00000182568.15 SATB1 chr3 18345387 18445588 - protein_coding KNOWN OTTHUMG00000129890.8 100202 13409 81 ENSG00000272477.1 RP11-158G18.1 chr3 18408680 18409635 - sense_intronic NOVEL OTTHUMG00000185577.1 956 956 1 ENSG00000228956.7 SATB1-AS1 chr3 18445024 18920401 + processed_transcript NOVEL OTTHUMG00000155346.8 475378 13505 358 ENSG00000236570.1 RAD23BP1 chr3 18538673 18539899 + processed_pseudogene KNOWN OTTHUMG00000155345.1 1227 1227 1 ENSG00000251761.1 RNU6-138P chr3 18954943 18955049 - snRNA KNOWN NA 107 107 1 ENSG00000116350.14 SRSF4 chr1 29147743 29181987 - protein_coding KNOWN OTTHUMG00000003663.4 34245 3442 29 ENSG00000183960.7 KCNH8 chr3 19148454 19535646 + protein_coding KNOWN OTTHUMG00000129891.2 387193 6148 36 ENSG00000271898.1 MIR4791 chr3 19314848 19314931 - miRNA KNOWN NA 84 84 1 ENSG00000163576.16 EFHB chr3 19879472 19947025 - protein_coding KNOWN OTTHUMG00000150505.2 67554 4163 59 ENSG00000232953.1 HSPA8P18 chr3 19940269 19943310 - processed_pseudogene KNOWN OTTHUMG00000150506.1 3042 1928 3 ENSG00000144566.9 RAB5A chr3 19947079 19985175 + protein_coding KNOWN OTTHUMG00000129889.3 38097 3785 35 ENSG00000183977.12 PP2D1 chr3 19979961 20012330 - protein_coding KNOWN OTTHUMG00000155393.1 32370 2523 9 ENSG00000201545.1 RNU4-85P chr3 19996803 19996925 + snRNA KNOWN NA 123 123 1 ENSG00000230697.1 AC097635.4 chr3 20007852 20008247 - processed_pseudogene KNOWN OTTHUMG00000155392.1 396 396 1 ENSG00000229468.1 AC097635.5 chr3 20012452 20012606 + processed_pseudogene KNOWN OTTHUMG00000155391.1 155 155 1 ENSG00000114166.7 KAT2B chr3 20040023 20154404 + protein_coding KNOWN OTTHUMG00000130481.3 114382 5634 33 ENSG00000277916.1 uc_338 chr1 29171285 29171453 - misc_RNA NOVEL NA 169 169 1 ENSG00000266745.1 MIR3135A chr3 20137565 20137641 + miRNA KNOWN NA 77 77 1 ENSG00000129810.13 SGOL1 chr3 20160593 20186292 - protein_coding KNOWN OTTHUMG00000130479.6 25700 3828 97 ENSG00000237485.4 SGOL1-AS1 chr3 20174244 20186427 + antisense NOVEL OTTHUMG00000155532.1 12184 853 7 ENSG00000199577.1 RNU6-822P chr3 20268965 20269070 - snRNA KNOWN NA 106 106 1 ENSG00000231304.1 AC107622.1 chr3 20342468 20350928 + lincRNA NOVEL OTTHUMG00000155533.1 8461 2041 5 ENSG00000261734.1 RP11-669C19.1 chr3 20388249 20390562 + lincRNA NOVEL OTTHUMG00000175701.1 2314 2314 1 ENSG00000206807.1 RNU6-815P chr3 20507644 20507756 - snRNA KNOWN NA 113 113 1 ENSG00000221659.1 AC104441.1 chr3 21138263 21138341 - miRNA NOVEL NA 79 79 1 ENSG00000273842.1 AC104183.2 chr3 21382478 21382542 + miRNA NOVEL NA 65 65 1 ENSG00000252306.1 AC104183.1 chr3 21388533 21388617 - miRNA NOVEL NA 85 85 1 ENSG00000116353.14 MECR chr1 29192873 29230942 - protein_coding KNOWN OTTHUMG00000059082.4 38070 3922 112 ENSG00000236380.5 VENTXP7 chr3 21405737 21406508 + processed_pseudogene KNOWN OTTHUMG00000155442.2 772 772 1 ENSG00000272511.1 RP11-180N14.1 chr3 21412222 21413944 - lincRNA NOVEL OTTHUMG00000185449.1 1723 1723 1 ENSG00000151789.8 ZNF385D chr3 21415071 22373321 - protein_coding KNOWN OTTHUMG00000130484.7 958251 10772 47 ENSG00000225542.1 ZNF385D-AS1 chr3 21542816 21579959 + antisense NOVEL OTTHUMG00000155559.1 37144 705 3 ENSG00000280519.1 SNORA32 chr3 21621486 21621568 + snoRNA NOVEL NA 83 83 1 ENSG00000221384.1 AC023798.1 chr3 21829738 21829837 + miRNA NOVEL NA 100 100 1 ENSG00000223351.4 ZNF385D-AS2 chr3 21942566 21979828 + lincRNA NOVEL OTTHUMG00000155585.2 37263 648 8 ENSG00000132967.9 HMGB1P5 chr3 22381819 22382929 + transcribed_processed_pseudogene KNOWN OTTHUMG00000155591.1 1111 1111 2 ENSG00000234723.1 AC092421.1 chr3 22670201 22670711 - unprocessed_pseudogene KNOWN OTTHUMG00000155593.1 511 418 3 ENSG00000271235.1 RP11-1037D22.1 chr3 22811390 22812047 - processed_pseudogene KNOWN OTTHUMG00000184399.1 658 605 2 ENSG00000237934.1 RP11-467D18.2 chr1 29223933 29224816 + antisense NOVEL OTTHUMG00000003569.2 884 573 3 ENSG00000226183.1 RANP7 chr3 22904135 22905151 + processed_pseudogene KNOWN OTTHUMG00000155606.1 1017 644 2 ENSG00000231915.2 SALL4P5 chr3 22989823 22991582 + unprocessed_pseudogene KNOWN OTTHUMG00000155607.1 1760 1760 1 ENSG00000215016.2 RPL24P7 chr3 23134372 23134824 + processed_pseudogene KNOWN OTTHUMG00000155609.1 453 453 1 ENSG00000233153.4 UBE2E2-AS1 chr3 23195070 23202578 - antisense NOVEL OTTHUMG00000155608.1 7509 532 6 ENSG00000182247.8 UBE2E2 chr3 23203020 23591793 + protein_coding KNOWN OTTHUMG00000130482.4 388774 3274 32 ENSG00000206728.1 Y_RNA chr3 23273807 23273910 + misc_RNA NOVEL NA 104 104 1 ENSG00000228171.1 AC121251.1 chr3 23389661 23389909 - unprocessed_pseudogene KNOWN OTTHUMG00000155611.1 249 249 1 ENSG00000221506.1 AC092038.1 chr3 23399500 23399569 - miRNA NOVEL NA 70 70 1 ENSG00000265645.1 AC092038.2 chr3 23480497 23480578 - miRNA NOVEL NA 82 82 1 ENSG00000252562.1 RNU6-922P chr3 23613661 23613759 - snRNA KNOWN NA 99 99 1 ENSG00000060656.18 PTPRU chr1 29236516 29326813 + protein_coding KNOWN OTTHUMG00000003699.6 90298 6682 160 ENSG00000212269.1 RNU6-788P chr3 23641489 23641592 - snRNA KNOWN NA 104 104 1 ENSG00000238672.1 AC020626.1 chr3 23767611 23767704 + miRNA NOVEL NA 94 94 1 ENSG00000223791.1 UBE2E1-AS1 chr3 23804024 23806905 - antisense NOVEL OTTHUMG00000155580.1 2882 778 2 ENSG00000170142.10 UBE2E1 chr3 23805903 23891316 + protein_coding KNOWN OTTHUMG00000130483.7 85414 3074 47 ENSG00000231395.1 AC124914.3 chr3 23878981 23879498 - processed_pseudogene KNOWN OTTHUMG00000155579.1 518 518 1 ENSG00000197885.9 NKIRAS1 chr3 23891660 23946591 - protein_coding KNOWN OTTHUMG00000155605.3 54932 3473 41 ENSG00000174748.17 RPL15 chr3 23916545 23923692 + protein_coding KNOWN OTTHUMG00000130485.4 7148 6528 48 ENSG00000174738.11 NR1D2 chr3 23945260 23980618 + protein_coding KNOWN OTTHUMG00000155659.5 35359 5820 31 ENSG00000224074.3 LINC00691 chr3 24096269 24103238 - lincRNA NOVEL OTTHUMG00000155662.1 6970 3446 6 ENSG00000242109.1 NPM1P23 chr3 24096512 24097360 - transcribed_processed_pseudogene KNOWN OTTHUMG00000155663.1 849 849 1 ENSG00000221550.2 AL645859.1 chr1 29253573 29253672 - miRNA NOVEL NA 100 100 1 ENSG00000151090.16 THRB chr3 24117160 24495282 - protein_coding KNOWN OTTHUMG00000130478.6 378123 8709 85 ENSG00000229756.1 RPL31P20 chr3 24430748 24431107 + processed_pseudogene KNOWN OTTHUMG00000155681.2 360 360 1 ENSG00000224822.1 THRB-IT1 chr3 24455136 24459434 - sense_intronic NOVEL OTTHUMG00000155680.1 4299 1754 2 ENSG00000228791.6 THRB-AS1 chr3 24494087 24681711 + processed_transcript NOVEL OTTHUMG00000155683.6 187625 6386 33 ENSG00000272554.1 RP11-317L10.1 chr3 24496272 24499580 - lincRNA NOVEL OTTHUMG00000186304.1 3309 809 2 ENSG00000265028.1 MIR4792 chr3 24521362 24521435 - miRNA KNOWN NA 74 74 1 ENSG00000233544.1 EIF3KP2 chr3 24555834 24556459 + processed_pseudogene KNOWN OTTHUMG00000155682.1 626 626 1 ENSG00000237838.1 AC133680.1 chr3 24687919 25174305 + lincRNA NOVEL OTTHUMG00000155664.2 486387 584 6 ENSG00000244404.3 RN7SL216P chr3 25020166 25020463 - misc_RNA KNOWN NA 298 298 1 ENSG00000201713.1 RNA5SP125 chr3 25025007 25025126 + rRNA KNOWN NA 120 120 1 ENSG00000160087.19 UBE2J2 chr1 1253909 1273885 - protein_coding KNOWN OTTHUMG00000001911.8 19977 4712 112 ENSG00000230523.1 RP3-437I16.1 chr1 29329620 29350114 - lincRNA NOVEL OTTHUMG00000003931.1 20495 2148 3 ENSG00000077092.17 RARB chr3 25174332 25597932 + protein_coding KNOWN OTTHUMG00000130480.5 423601 3697 57 ENSG00000213877.3 CFL1P7 chr3 25324174 25324659 + processed_pseudogene KNOWN OTTHUMG00000155603.1 486 486 1 ENSG00000275044.1 AC098477.1 chr3 25345565 25345665 + miRNA NOVEL NA 101 101 1 ENSG00000201962.1 RNA5SP126 chr3 25352284 25352392 - rRNA KNOWN NA 109 109 1 ENSG00000229421.1 AC133141.1 chr3 25441164 25441502 - processed_pseudogene KNOWN OTTHUMG00000155597.2 339 339 1 ENSG00000272166.1 SNORD5 chr3 25555543 25555606 - snoRNA NOVEL NA 64 64 1 ENSG00000077097.12 TOP2B chr3 25597905 25664907 - protein_coding KNOWN OTTHUMG00000155596.3 67003 6044 121 ENSG00000275227.1 uc_338 chr3 25618132 25618312 - misc_RNA NOVEL NA 181 181 1 ENSG00000264219.1 MIR4442 chr3 25664873 25664939 - miRNA KNOWN NA 67 67 1 ENSG00000238225.1 CRIP1P2 chr3 25686896 25687123 + processed_pseudogene KNOWN OTTHUMG00000155595.1 228 228 1 ENSG00000266678.1 AL139151.1 chr1 29432481 29432562 + miRNA NOVEL NA 82 82 1 ENSG00000151092.15 NGLY1 chr3 25718944 25790039 - protein_coding KNOWN OTTHUMG00000155600.4 71096 8326 107 ENSG00000213872.3 AC092798.2 chr3 25749488 25749896 + processed_pseudogene KNOWN OTTHUMG00000155602.2 409 409 1 ENSG00000213871.3 TAF9BP1 chr3 25754925 25755670 + processed_pseudogene KNOWN OTTHUMG00000155604.1 746 746 1 ENSG00000151093.6 OXSM chr3 25782917 25794534 + protein_coding KNOWN OTTHUMG00000130477.5 11618 2486 24 ENSG00000230891.5 LINC00692 chr3 25858533 25873700 - processed_transcript KNOWN OTTHUMG00000155601.1 15168 934 13 ENSG00000234158.1 RPEP2 chr3 26015669 26016369 + processed_pseudogene KNOWN OTTHUMG00000155599.1 701 701 1 ENSG00000237603.1 HMGB3P12 chr3 26216322 26216877 + processed_pseudogene KNOWN OTTHUMG00000155598.1 556 556 1 ENSG00000230465.1 VENTXP4 chr3 26346681 26347638 - processed_pseudogene KNOWN OTTHUMG00000155613.1 958 958 1 ENSG00000225386.1 AC099754.1 chr3 26619330 26622690 - lincRNA NOVEL OTTHUMG00000155650.1 3361 454 4 ENSG00000179796.10 LRRC3B chr3 26622806 26710776 + protein_coding KNOWN OTTHUMG00000130572.6 87971 3271 14 ENSG00000225011.4 RP11-810H18.1 chr1 29488193 29496893 - unprocessed_pseudogene KNOWN OTTHUMG00000057509.1 8701 349 2 ENSG00000234165.1 AC114877.3 chr3 26712307 26713364 + lincRNA NOVEL OTTHUMG00000155686.1 1058 582 2 ENSG00000221438.1 AC114877.1 chr3 26753937 26754076 - miRNA NOVEL NA 140 140 1 ENSG00000163491.15 NEK10 chr3 27110085 27369460 - protein_coding KNOWN OTTHUMG00000130571.13 259376 9582 166 ENSG00000224237.1 MINOS1P3 chr3 27214816 27215018 - processed_pseudogene KNOWN OTTHUMG00000155687.1 203 203 1 ENSG00000207251.1 RNU6-342P chr3 27265580 27265683 - snRNA KNOWN NA 104 104 1 ENSG00000221573.1 AC099535.1 chr3 27362566 27362658 - miRNA NOVEL NA 93 93 1 ENSG00000033867.15 SLC4A7 chr3 27372721 27484420 - protein_coding KNOWN OTTHUMG00000155679.15 111700 9616 357 ENSG00000227523.1 RPS20P15 chr3 27462506 27462816 + processed_pseudogene KNOWN OTTHUMG00000155689.1 311 311 1 ENSG00000230807.1 AC099535.4 chr3 27486247 27486617 + processed_pseudogene KNOWN OTTHUMG00000155688.1 371 371 1 ENSG00000201033.1 RNU1-96P chr3 27513871 27514032 + snRNA KNOWN NA 162 162 1 ENSG00000221126.1 AC092265.1 chr1 29644545 29644678 - miRNA NOVEL NA 134 134 1 ENSG00000232167.1 AC137675.1 chr3 27525353 27525394 + processed_pseudogene KNOWN OTTHUMG00000155690.1 42 42 1 ENSG00000238912.1 Y_RNA chr3 27547757 27547858 - misc_RNA NOVEL NA 102 102 1 ENSG00000223968.1 AC098614.1 chr3 27624202 27624456 - processed_pseudogene KNOWN OTTHUMG00000155633.1 255 255 1 ENSG00000213846.4 AC098614.2 chr3 27632976 27633720 + processed_pseudogene KNOWN OTTHUMG00000155631.1 745 745 1 ENSG00000271943.1 RP11-222K16.1 chr3 27638315 27638776 + lincRNA NOVEL OTTHUMG00000185460.1 462 462 1 ENSG00000232766.1 AC098614.3 chr3 27703129 27703568 - processed_pseudogene KNOWN OTTHUMG00000155632.1 440 440 1 ENSG00000272282.1 RP11-222K16.2 chr3 27712910 27714005 + lincRNA NOVEL OTTHUMG00000185461.1 1096 1096 1 ENSG00000163508.11 EOMES chr3 27715949 27722711 - protein_coding KNOWN OTTHUMG00000130570.3 6763 3656 18 ENSG00000225548.4 AC098973.2 chr3 27802762 27891301 + lincRNA NOVEL OTTHUMG00000155653.1 88540 935 10 ENSG00000229243.1 AC098973.1 chr3 27830888 27834136 - lincRNA NOVEL OTTHUMG00000155652.1 3249 2833 2 ENSG00000228176.1 RP4-656G21.1 chr1 29708851 29709547 - lincRNA NOVEL OTTHUMG00000037527.1 697 498 2 ENSG00000235493.1 AC092415.1 chr3 27997210 28028604 - lincRNA NOVEL OTTHUMG00000155651.1 31395 850 5 ENSG00000187118.11 CMC1 chr3 28241584 28325142 + protein_coding KNOWN OTTHUMG00000155660.3 83559 10536 38 ENSG00000163512.12 AZI2 chr3 28315003 28349127 - protein_coding KNOWN OTTHUMG00000130573.8 34125 6349 74 ENSG00000206559.6 ZCWPW2 chr3 28349146 28538122 + protein_coding KNOWN OTTHUMG00000155705.2 188977 2895 34 ENSG00000234048.1 FAM96AP1 chr3 28427963 28428444 - processed_pseudogene KNOWN OTTHUMG00000155722.1 482 482 1 ENSG00000230480.1 AC093142.2 chr3 28447725 28448073 + processed_pseudogene KNOWN OTTHUMG00000155706.1 349 349 1 ENSG00000228214.5 LINC00693 chr3 28574791 28758340 + antisense NOVEL OTTHUMG00000155718.2 183550 2299 12 ENSG00000238470.1 AC097361.1 chr3 29011242 29011336 + miRNA NOVEL NA 95 95 1 ENSG00000215004.3 MESTP4 chr3 29087396 29088599 + processed_pseudogene KNOWN OTTHUMG00000155719.1 1204 1204 1 ENSG00000235904.1 RBMS3-AS3 chr3 29264194 29290726 - antisense NOVEL OTTHUMG00000155693.1 26533 613 2 ENSG00000222787.1 AL645944.1 chr1 29884902 29885005 + miRNA NOVEL NA 104 104 1 ENSG00000144642.19 RBMS3 chr3 29280982 30010391 + protein_coding KNOWN OTTHUMG00000155699.7 729410 10350 115 ENSG00000216169.1 AC098650.1 chr3 29369337 29369421 - miRNA NOVEL NA 85 85 1 ENSG00000226216.1 RPS12P5 chr3 29390848 29391218 + processed_pseudogene KNOWN OTTHUMG00000155733.1 371 371 1 ENSG00000203506.4 RBMS3-AS2 chr3 29526251 29642809 - antisense NOVEL OTTHUMG00000155692.3 116559 2303 20 ENSG00000227795.1 AC092796.1 chr3 29797652 29797825 - processed_pseudogene KNOWN OTTHUMG00000155734.1 174 174 1 ENSG00000235593.1 RBMS3-AS1 chr3 29926811 29934156 - antisense NOVEL OTTHUMG00000155691.1 7346 554 3 ENSG00000264178.1 AC137674.1 chr3 30138248 30138315 + miRNA NOVEL NA 68 68 1 ENSG00000266546.1 AC137674.2 chr3 30138960 30139033 - miRNA NOVEL NA 74 74 1 ENSG00000199927.2 ACEA_U3 chr3 30304320 30304536 - snoRNA NOVEL NA 217 217 1 ENSG00000281710.1 U3 chr3 30304321 30304536 - snoRNA NOVEL NA 216 216 1 ENSG00000270927.1 RP11-179G8.1 chr1 29904865 29905357 - processed_pseudogene KNOWN OTTHUMG00000184275.1 493 493 1 ENSG00000227260.1 AC116035.1 chr3 30524745 30527185 + lincRNA NOVEL OTTHUMG00000155731.1 2441 436 2 ENSG00000227549.1 AC116035.2 chr3 30524990 30526213 - lincRNA NOVEL OTTHUMG00000155735.1 1224 517 2 ENSG00000163513.16 TGFBR2 chr3 30606502 30694142 + protein_coding KNOWN OTTHUMG00000130569.3 87641 4704 15 ENSG00000224618.1 AC096921.2 chr3 30626423 30626797 - processed_pseudogene KNOWN OTTHUMG00000155732.1 375 375 1 ENSG00000261468.1 RP11-1024P17.1 chr3 30697661 30699576 + sense_overlapping NOVEL OTTHUMG00000175700.1 1916 1916 1 ENSG00000144644.13 GADL1 chr3 30726200 30894765 - protein_coding KNOWN OTTHUMG00000130621.3 168566 7330 30 ENSG00000265376.1 MIR466 chr3 31161704 31161787 - miRNA KNOWN NA 84 84 1 ENSG00000213854.3 CNN2P6 chr3 31181751 31182650 - processed_pseudogene KNOWN OTTHUMG00000155812.1 900 900 1 ENSG00000222983.1 RNA5SP127 chr3 31228715 31228847 + rRNA KNOWN NA 133 133 1 ENSG00000230111.1 AC115283.1 chr3 31269007 31269406 + processed_pseudogene KNOWN OTTHUMG00000155813.1 400 400 1 ENSG00000233399.2 RP11-111I12.1 chr1 30013952 30037612 - lincRNA NOVEL OTTHUMG00000003683.2 23661 1519 7 ENSG00000227339.1 THRAP3P1 chr3 31452832 31455894 + processed_pseudogene KNOWN OTTHUMG00000155810.1 3063 2786 2 ENSG00000163527.8 STT3B chr3 31532638 31637622 + protein_coding KNOWN OTTHUMG00000130673.4 104985 5012 56 ENSG00000144645.12 OSBPL10 chr3 31657890 32077580 - protein_coding KNOWN OTTHUMG00000130672.10 419691 11976 82 ENSG00000232490.5 OSBPL10-AS1 chr3 31704058 31721652 + antisense NOVEL OTTHUMG00000155828.2 17595 2307 26 ENSG00000223965.2 ZNF587P1 chr3 31794470 31796175 + processed_pseudogene KNOWN OTTHUMG00000155827.1 1706 1386 2 ENSG00000197385.5 ZNF860 chr3 31981771 31991628 + protein_coding KNOWN OTTHUMG00000155838.1 9858 3263 5 ENSG00000281372.1 AC108485.1 chr3 32001682 32001779 + miRNA NOVEL NA 98 98 1 ENSG00000235670.1 RPL21P40 chr3 32030196 32030678 + processed_pseudogene KNOWN OTTHUMG00000155839.1 483 483 1 ENSG00000201701.1 SNORA25 chr3 32037526 32037653 + snoRNA NOVEL NA 128 128 1 ENSG00000252398.1 Y_RNA chr3 32045873 32045979 + misc_RNA NOVEL NA 107 107 1 ENSG00000233372.1 RP5-893G23.1 chr1 30140263 30141607 + lincRNA PUTATIVE OTTHUMG00000003685.1 1345 551 2 ENSG00000251590.1 NIFKP7 chr3 32063974 32066611 - unprocessed_pseudogene KNOWN OTTHUMG00000155837.1 2638 834 4 ENSG00000152642.9 GPD1L chr3 32105689 32168713 + protein_coding KNOWN OTTHUMG00000155846.2 63025 4802 34 ENSG00000236732.1 AC094019.4 chr3 32151083 32151895 - unprocessed_pseudogene KNOWN OTTHUMG00000155845.1 813 472 2 ENSG00000237433.1 AC097639.8 chr3 32190747 32191627 + processed_pseudogene KNOWN OTTHUMG00000155857.1 881 881 1 ENSG00000261572.1 RP11-384L8.1 chr3 32236688 32238578 - sense_intronic NOVEL OTTHUMG00000175702.1 1891 1891 1 ENSG00000170293.7 CMTM8 chr3 32238679 32370325 + protein_coding KNOWN OTTHUMG00000130753.2 131647 1174 7 ENSG00000270377.1 RP11-384L8.2 chr3 32243847 32244018 - processed_pseudogene KNOWN OTTHUMG00000184394.1 172 172 1 ENSG00000234737.1 KRT18P15 chr3 32258940 32260230 + processed_pseudogene KNOWN OTTHUMG00000155858.1 1291 1291 1 ENSG00000207857.2 AC097639.1 chr3 32259728 32259819 + miRNA NOVEL NA 92 92 1 ENSG00000153551.12 CMTM7 chr3 32391671 32483067 + protein_coding KNOWN OTTHUMG00000155869.3 91397 3751 23 ENSG00000231251.1 RP3-357I16.1 chr1 30226523 30226615 + processed_pseudogene KNOWN OTTHUMG00000057511.1 93 93 1 ENSG00000091317.7 CMTM6 chr3 32481312 32503408 - protein_coding KNOWN OTTHUMG00000130747.2 22097 4413 9 ENSG00000276147.1 MIR548AY chr3 32506283 32506389 - miRNA KNOWN NA 107 107 1 ENSG00000213849.3 AC104306.1 chr3 32507955 32508325 + processed_pseudogene KNOWN OTTHUMG00000155877.1 371 371 1 ENSG00000264135.1 AC104306.2 chr3 32515726 32515820 + miRNA NOVEL NA 95 95 1 ENSG00000144635.7 DYNC1LI1 chr3 32525971 32570874 - protein_coding KNOWN OTTHUMG00000130750.2 44904 6132 55 ENSG00000226955.1 AC104306.4 chr3 32592972 32593312 - processed_pseudogene KNOWN OTTHUMG00000155901.1 341 341 1 ENSG00000231552.1 IGBP1P3 chr3 32620903 32621902 - processed_pseudogene KNOWN OTTHUMG00000155898.1 1000 1000 1 ENSG00000237676.1 RPL30P4 chr3 32635222 32635554 - processed_pseudogene KNOWN OTTHUMG00000155900.1 333 333 1 ENSG00000182973.17 CNOT10 chr3 32685145 32773875 + protein_coding KNOWN OTTHUMG00000130748.5 88731 4846 145 ENSG00000251224.1 CNOT10-AS1 chr3 32730635 32737454 - antisense NOVEL OTTHUMG00000162550.1 6820 466 2