Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	51598	12756874	6524	0.0491
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	12757167	13538239	87	0.2767
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	13560783	16909130	2191	0.0135
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	16909273	17055024	32	-0.2811
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	17062591	17180745	81	0.5495
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	17184410	34864045	10254	0.025
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	34864181	34889148	26	0.3281
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	34890512	37624300	1460	0.0145
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	37625557	37693630	45	0.2685
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	37695986	72541504	22290	0.0143
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	72541524	72583736	45	-1.4746
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	72584492	99651042	17490	0.0117
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	99651433	99655635	2	1.4583
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	99656085	103957254	2607	0.0055
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	103957325	104069745	34	-0.4982
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	104104926	108570825	2901	-0.0019
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	108618702	108651174	5	-0.8868
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	108654793	108712268	49	0.0057
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	108729983	108787704	10	-0.9115
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	108787720	110025950	629	0.0251
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	110027165	110044476	31	0.9713
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	110046521	112491849	1958	0.0202
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	112497488	112507721	35	-0.2512
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	112507728	147173241	6361	0.0252
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	147173894	147703466	177	-0.4216
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	147788464	147884075	8	0.4831
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	147884112	151026302	1693	0.0253
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	151028547	151045067	40	-0.2916
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	151045150	155745162	2496	0.024
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	155749078	155749571	2	-1.4115
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	155749897	157133197	1123	0.0108
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	157135125	157136383	2	-1.4891
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	157141442	160108572	1859	0.0139
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	160108664	160108831	2	-1.3463
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	160110730	194981496	24083	0.0095
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	194994473	195068625	92	-0.5036
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	195068695	197374325	1383	0.0032
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	197377986	197379634	8	-0.9826
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	197380463	228645252	21096	0.0191
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	228649946	228654748	4	-0.9774
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	228657719	240487462	9125	0.0184
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	240487511	240491378	2	-1.9037
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	240491493	246659495	4129	0.015
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	246659864	246703887	18	-0.4537
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	246705249	246754468	13	0.1734
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	246754783	246755238	5	-1.0148
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	1	246764014	247191011	184	0.0408
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	2	2784	4183562	2990	0.0535
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	2	4191739	4201042	36	-0.6024
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	2	4201387	9201327	4095	0.0184
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	2	9206527	9210002	6	-1.1046
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	2	9214908	14269775	3610	0.0206
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	2	14271361	14290146	60	0.4992
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	2	14296778	34552819	13329	0.0224
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	2	34554898	34590561	45	-2.1295
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	2	34590667	35829477	878	-0.0299
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	2	35831294	35840220	4	-1.7311
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	2	35840412	41091739	3951	0.0107
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	2	41091947	41099391	23	-0.6941
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	2	41104737	52597429	8198	0.0066
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	2	52607972	52635046	40	0.3343
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	2	52641453	150454129	55742	0.019
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	2	150459972	150468267	7	-1.0094
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	2	150471349	207663403	34671	0.0129
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	2	207665482	207665596	2	-1.7123
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	2	207665640	242738129	22448	0.0261
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	3	35345	10149353	8622	-0.005
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	3	10154116	10274463	115	0.2108
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	3	10276300	21925113	7819	0.0165
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	3	21925223	21926887	4	-1.1083
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	3	21926911	68828854	31333	0.0105
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	3	68828949	68830103	14	-1.3433
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	3	68831448	131236625	34750	0.0118
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	3	131237039	131289688	61	0.4821
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	3	131290966	137501789	4036	0.0172
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	3	137505641	137508116	2	-2.2464
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	3	137521231	138515503	468	0.011
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	3	138515710	138515953	5	-0.7745
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	3	138516112	144766027	3862	0.0187
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	3	144766565	144770235	11	-0.4835
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	3	144772742	163967076	11886	0.0078
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	3	163967533	164137410	125	-0.3593
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	3	164137796	175008678	6541	-0.0051
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	3	175010890	175030326	15	-0.5141
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	3	175033307	194360596	12622	0.0057
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	3	194360656	194361700	6	1.2236
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	3	194363167	196766953	1499	0.0407
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	3	196767187	196932593	29	-0.71
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	3	196941179	196960434	19	-0.1766
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	3	196964365	198150195	548	0.0432
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	3	198150456	198237120	45	0.3038
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	3	198251169	199380515	581	0.0442
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	2281	51936	53	0.2762
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	52126	4060257	1617	0.0578
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	4065502	4227530	54	0.3433
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	4228074	9105392	3541	0.0369
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	9106943	9268492	47	0.3232
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	9272761	9819488	497	0.0288
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	9823258	9839895	23	-0.552
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	9839910	32110027	15714	0.0088
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	32111086	32152431	25	-0.3079
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	32153339	34354813	1209	-0.003
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	34361445	34363566	4	1.2161
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	34376289	34455399	58	0.0016
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	34455420	34501120	41	0.5975
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	34506267	37439281	2059	0.0042
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	37439409	37440317	3	-1.3349
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	37440390	41152680	2361	0.0136
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	41155031	41161610	6	-1.3984
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	41164642	42840154	1110	-0.0017
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	42840188	42858130	20	-0.396
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	42858360	48864703	3428	0.0016
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	48874613	49353369	31	0.5499
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	52380456	61619533	6079	0.012
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	61623530	61624547	2	-1.299
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	61628281	64380125	1506	0.0016
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	64380204	64386888	4	-0.915
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	64387751	64388380	14	0.0521
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	64390176	64399621	10	-1.1678
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	64400638	69057550	2878	0.0035
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	69057755	69171930	64	0.6297
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	69187710	70158099	331	-0.0474
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	70162233	70263245	51	0.2451
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	70263941	72985748	1497	0.0047
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	72986342	73002869	8	-0.5695
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	73005286	83852850	6822	0.0135
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	83856392	83859356	11	-1.1205
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	83860850	98153543	8762	0.0081
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	98153941	98157359	2	-1.444
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	98158101	138157815	23442	0.0106
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	138157928	138191564	48	-0.2575
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	138195535	172605921	21567	0.0121
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	172611459	172614285	10	0.9097
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	172614299	173225799	402	0.0088
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	173225875	173226080	7	-2.2193
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	173226094	183251489	6695	-0.0041
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	183251872	183253938	2	-1.6968
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	183258073	189458252	4253	0.0327
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	189458354	189458418	3	-1.2382
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	189458433	189673909	210	0.0569
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	189674080	189674404	8	-0.8573
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	189676866	190695769	737	-0.0031
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	190701251	190718239	8	0.5373
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	190720242	191195137	209	0.1405
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	4	191204243	191261904	6	0.6801
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	5	68532	777727	318	0.1629
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	5	778206	873036	40	0.5973
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	5	875123	46306865	30473	0.0153
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	5	46307687	46309259	6	-2.0131
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	5	46313969	74450117	14921	0.0109
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	5	74450390	74460006	2	-1.5643
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	5	74463822	93287515	10910	0.0108
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	5	93292993	93296796	3	-1.2503
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	5	93301159	95387779	1193	0.02
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	5	95391042	95392782	2	-1.2244
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	5	95392838	95727330	172	0.0153
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	5	95729629	95730061	2	-1.2822
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	5	95734926	155409498	38299	0.0097
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	5	155409576	155427828	13	-2.1176
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	5	155427831	180307129	16655	0.0236
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	5	180311316	180350709	19	0.7528
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	5	180365831	180722926	171	0.1362
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	6	94661	212622	108	0.1327
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	6	212693	248017	18	0.5708
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	6	248121	26840385	20168	0.0181
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	6	26845011	26881488	27	-0.3741
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	6	26891646	29945166	1438	0.0108
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	6	29945167	29957104	14	-0.5742
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	6	29957246	31394284	677	0.0484
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	6	31394510	31403385	5	-1.8116
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	6	31403932	31445115	27	0.0652
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	6	31445829	31448786	8	-0.9871
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	6	31451583	32732282	538	0.0548
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	6	32732569	32734596	5	-0.9668
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	6	32758590	48470591	10090	0.0178
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	6	48473421	48479887	7	-1.3311
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	6	48484290	54039110	3657	0.0068
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	6	54039189	54039814	6	-1.2109
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	6	54043307	74648586	10529	0.0041
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	6	74648953	74660347	13	0.5785
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	6	74660447	77492878	1763	0.0054
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	6	77493251	77499966	12	-0.5897
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	6	77502918	79019608	989	-0.0047
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	6	79025784	79091904	113	-2.4401
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	6	79095953	170892930	59812	0.0134
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	52911	5841392	3048	0.0454
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	5845026	5885566	23	0.4021
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	5885636	11886875	4529	-0.0149
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	11887534	11887944	4	-1.3452
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	11890777	13946750	1655	0.0019
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	13946802	13948610	5	-0.7883
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	13948699	22401305	6850	-0.0121
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	22401997	22403012	2	-2.5492
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	22405279	28845762	4677	0.0187
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	28845849	28850008	4	-0.8194
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	28853096	29083639	194	0.0294
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	29086054	29086866	3	0.648
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	29086970	29193193	86	0.0339
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	29207970	29208745	3	-0.9695
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	29208817	29654690	417	0.034
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	29656210	29656584	2	-1.592
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	29657608	69953809	23339	0.0214
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	69959275	70002449	33	0.7011
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	70003179	70058374	32	-0.0051
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	70061186	70064077	2	-2.3963
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	70066179	72040770	1190	0.0146
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	72041030	72364670	35	0.3077
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	72369889	76256448	1080	0.0306
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	76258960	76445231	148	0.3847
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	76547548	100807789	14970	0.0038
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	100809081	100891737	32	0.3114
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	100896410	101811189	442	0.0126
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	101811250	101811265	2	-1.0407
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	101812662	104007573	1214	0.0178
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	104007939	104008156	2	1.0657
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	104009230	109224337	3408	0.0088
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	109224905	109228159	15	0.2852
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	109228448	109241094	11	0.6384
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	109241146	111859031	1743	-0.0149
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	111859095	111863751	2	-1.4324
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	111864848	125832792	8299	0.0022
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	125832887	125833851	10	0.6375
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	125834112	130011632	2374	0.0166
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	130012574	130012614	2	-1.4309
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	130015298	133429189	2328	0.0283
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	133429192	133449083	34	0.4937
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	133449098	141409593	5205	0.0152
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	141416112	141438576	42	-0.5886
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	141441750	141831975	300	0.0092
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	141832527	141844533	14	-0.7431
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	141853923	147345714	3460	0.0101
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	147346327	147346527	2	-1.4892
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	147346829	154020828	4038	0.0281
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	154024104	154030546	4	0.9398
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	7	154031763	158819765	3247	0.0557
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	21254	584973	329	0.1168
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	585220	585908	8	1.1421
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	591043	1327236	524	0.0841
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	1327335	1346442	2	-1.6373
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	1346563	6180133	6099	0.0107
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	6180239	6181843	4	-0.9858
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	6183989	6812946	753	0.0313
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	6813086	6867472	27	0.3883
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	6869803	7242520	119	0.139
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	7254775	8139935	216	0.3967
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	8140241	12038532	3229	0.0478
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	12071716	12593116	131	0.5087
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	12593598	12690760	80	0.0522
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	12693099	12696897	4	-1.4144
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	12697904	39349816	19397	0.0132
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	39354760	39506122	59	0.6493
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	39507456	39989082	301	-0.0011
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	39991495	39991519	2	-1.2238
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	39992092	51193299	4291	0.0164
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	51193325	51195976	10	-0.6277
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	51201131	54143278	1913	0.013
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	54146876	54153567	9	0.6409
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	54154396	68710223	9028	0.0106
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	68710686	68710954	6	-0.8054
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	68711045	72373302	2356	0.0218
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	72374735	72379153	11	-0.5908
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	72382417	72477452	77	-0.0248
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	72477540	72487440	3	-1.1379
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	72489474	102689880	18194	0.0071
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	102690629	102694888	7	-0.9022
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	102698572	112364214	5869	-0.001
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	112364257	112364421	3	2.0476
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	112364436	115700612	1825	-0.0014
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	115701219	115707526	15	-0.7881
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	115707571	115710248	12	0.0492
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	115710312	115719963	11	-0.8386
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	115723944	127778608	8254	0.0053
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	127781866	127786380	7	-0.7794
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	127797155	137228311	7286	0.0092
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	137231308	137233823	2	1.337
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	137234108	141532754	3464	0.0042
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	141533085	141533287	2	-1.4224
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	141535164	144778027	1562	0.1128
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	144778121	144778951	3	-0.8942
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	8	144790132	146268959	506	0.125
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	9	36587	5069156	5253	0.0134
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	9	5071416	5071766	8	-0.9063
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	9	5071852	38798958	25946	-4e-04
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	9	38902297	38984130	11	0.5189
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	9	38986103	43594976	199	0.091
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	9	43598079	43730342	21	-0.4358
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	9	43740182	44569219	50	0.1491
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	9	44667855	44795733	36	0.8564
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	9	44806024	72796553	2459	0.0384
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	9	72799873	72800108	3	-0.8958
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	9	72800327	77189463	2894	0.015
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	9	77192380	77197981	4	-1.0879
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	9	77202279	89712414	9270	0.0125
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	9	89743971	89744039	2	-1.2257
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	9	89747777	138191693	33079	0.0164
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	9	138192805	138256550	22	0.3287
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	9	138258841	138521325	82	0.0419
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	9	138523591	138555190	15	0.2923
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	9	138555205	139284183	155	0.0375
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	9	139284724	139403162	33	0.3284
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	9	139410610	140211215	407	0.0531
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	10	62759	42002139	29231	0.0183
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	10	42005267	42083236	14	0.6151
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	10	42087649	47131054	2648	0.0234
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	10	47131895	47213507	75	0.2817
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	10	47213522	48503408	300	0.0276
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	10	48522382	48554762	3	1.3274
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	10	48567024	61028273	8467	-0.0035
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	10	61034121	61035488	9	-0.8013
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	10	61035809	66976282	4027	0.0107
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	10	66977929	66992801	29	0.4137
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	10	66992932	135079131	46194	0.0185
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	10	135079709	135079858	2	-2.2312
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	10	135082644	135356694	151	0.0677
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	11	188510	4926819	2483	0.0465
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	11	4926853	4932848	28	0.4759
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	11	4932910	5740499	795	-0.0083
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	11	5743981	5768936	36	-0.6746
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	11	5772762	49664951	30559	0.0098
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	11	49667437	49714167	18	-0.76
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	11	49714247	55130779	768	0.0377
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	11	55132599	55198894	44	0.335
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	11	55200787	67185508	6235	0.0235
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	11	67186675	67197671	4	0.6311
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	11	67197930	67459334	76	0.2044
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	11	67459503	67527168	22	0.4927
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	11	67527195	107286589	26543	0.0075
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	11	107289717	107290308	2	-3.3622
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	11	107292923	120188226	8771	0.0174
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	11	120188804	120196642	4	0.9242
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	11	120197749	134449982	10809	0.0313
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	12	20703	739459	420	0.1152
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	12	739524	744290	16	-0.9994
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	12	745615	8212166	5110	0.0276
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	12	8214105	8488059	103	0.3993
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	12	8491630	30130581	14943	0.0095
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	12	30130686	30134898	20	-0.6669
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	12	30134932	31264661	929	0.0094
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	12	31264713	31270181	9	-0.5195
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	12	31270663	33185927	1336	0.0275
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	12	33192673	33199726	30	-0.5156
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	12	33199764	33225542	21	-0.1554
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	12	33229024	33277097	21	0.3994
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	12	33278024	33286685	6	-0.7348
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	12	33290320	34450576	692	0.5395
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	12	34467977	50974951	8611	0.0118
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	12	50975033	51073488	115	0.2218
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	12	51074279	82687318	19831	0.0101
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	12	82687421	82689372	3	-1.2735
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	12	82689410	85838461	1779	0.0025
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	12	85845439	85916392	35	-0.2576
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	12	85916678	98319982	8288	0.0091
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	12	98320317	98321033	13	0.4497
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	12	98321220	127794839	19700	0.0156
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	12	127796466	127798250	6	-1.0416
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	12	127798498	132288262	3086	0.057
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	13	17924949	18296769	86	0.2599
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	13	18296807	22527177	2809	0.035
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	13	22527187	22531515	14	-0.6261
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	13	22536195	25034606	1898	0.0332
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	13	25035813	25036126	3	-1.0713
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	13	25039486	36969135	8761	0.014
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	13	36970036	36982321	13	-0.5026
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	13	36982543	37950811	704	-0.0014
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	13	37955572	37956056	2	-1.5098
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	13	37963057	66070780	17500	0.0027
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	13	66074220	66075784	2	-1.9682
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	13	66076345	66424982	293	-0.0503
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	13	66425644	66425708	3	-1.4744
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	13	66425823	71374989	3091	-0.0114
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	13	71375556	71378557	4	-1.7873
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	13	71378606	104637123	22599	0.0059
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	13	104638037	104647202	12	-0.6146
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	13	104654213	114126499	6556	0.0135
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	14	18072124	18763249	50	0.119
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	14	18767885	19490079	138	-0.4163
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	14	19492423	30337118	6949	-0.002
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	14	30337422	30338169	3	-1.3216
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	14	30340835	73065527	27222	0.0091
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	14	73070876	73099653	10	0.8161
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	14	73099668	92582303	12807	0.0105
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	14	92582959	92586218	2	-1.5173
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	14	92589644	105531947	7991	0.027
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	14	105550720	105550986	2	-1.4065
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	14	105553173	105618359	28	-0.0961
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	14	105618552	105632486	9	-2.7266
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	14	105638145	105930103	134	0.1011
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	14	105934561	105945406	9	-0.6271
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	14	105950876	106231370	186	0.094
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	14	106231444	106245617	12	-0.4707
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	14	106247258	106356482	77	0.0959
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	15	18276341	18841576	104	0.213
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	15	18841578	19792388	208	-0.0516
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	15	19794591	20304073	121	0.3173
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	15	20306536	26814079	3858	0.0373
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	15	26830939	26895793	9	-0.3922
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	15	26998850	32501415	3519	0.0398
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	15	32507087	32514481	8	0.7519
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	15	32514914	35894700	2357	0.0073
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	15	35895941	35899052	4	-1.1271
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	15	35899628	74678296	24186	0.0133
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	15	74678566	74682830	21	-1.9629
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	15	74689234	82619355	4622	0.0176
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	15	82652350	82854151	23	0.4118
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	15	82884610	100286563	13052	0.0241
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	16	777	18015707	12738	0.0311
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	16	18015955	18016025	2	-1.5639
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	16	18016055	28539522	6248	0.0285
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	16	28556704	28732153	7	0.5886
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	16	28732372	29187251	161	0.1194
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	16	29188025	29188556	3	-1.261
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	16	29189266	31867652	901	0.0582
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	16	31873117	32563024	140	0.2816
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	16	32650790	54352715	7134	0.022
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	16	54353890	54374147	18	-0.5209
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	16	54374206	54401237	13	0.0188
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	16	54401301	54416294	7	0.7365
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	16	54425940	76929109	14502	0.0114
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	16	76929941	76942266	17	0.9218
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	16	76942502	79553785	3064	0.0195
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	16	79556024	79562903	11	-0.53
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	16	79564259	82351496	3057	0.0217
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	16	82351498	82351507	2	-1.4825
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	16	82351525	88815036	4512	0.0735
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	17	526	9903765	5787	0.0415
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	17	9904138	9922640	16	0.4863
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	17	9924163	10252751	272	0.0304
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	17	10253205	10254416	2	-1.5094
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	17	10256197	16603639	4441	0.0216
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	17	16603776	16680995	11	0.585
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	17	16682240	31460821	7874	0.0298
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	17	31461241	31896529	46	0.6032
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	17	31896592	41563921	5106	0.0326
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	17	41564110	41719947	93	0.5722
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	17	41750187	78643088	21681	0.0199
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	18	1543	14105121	10080	0.0158
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	18	14113194	14341752	57	0.2652
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	18	14342852	36514468	12726	0.0103
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	18	36514478	36523810	18	-0.6538
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	18	36524070	55359806	12876	0.0146
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	18	55362439	55365622	2	-1.259
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	18	55366722	76116029	15096	0.001
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	19	41910	12553001	5077	0.027
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	19	12558366	12559102	2	-1.5141
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	19	12561523	19696753	3479	0.0141
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	19	19697676	19735092	20	0.4121
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	19	19735871	20386147	411	0.0681
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	19	20386516	20513302	74	-0.7173
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	19	20515685	21606759	623	0.0424
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	19	21607480	21624561	9	0.64
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	19	21627573	40547193	7139	0.0282
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	19	40547289	40553688	20	0.4602
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	19	40558584	41594853	505	0.0422
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	19	41595102	41595404	3	-0.9637
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	19	41597912	46025110	2281	0.0125
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	19	46026578	46086176	46	0.24
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	19	46086890	47907168	877	0.017
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	19	47908811	48139858	89	0.4872
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	19	48140535	52305008	2089	0.035
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	19	52317317	52339945	5	1.1696
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	19	52347289	56823625	2223	0.0475
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	19	56834164	56840009	11	-2.4989
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	19	56846717	58983951	1541	0.0719
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	19	58987868	58988514	4	-0.9244
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	19	58990787	60974347	990	0.0774
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	19	60974841	60974879	2	-2.3505
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	19	60978105	63581014	1751	0.0296
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	19	63582947	63789666	99	0.2253
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	20	9305	1500503	1186	0.0543
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	20	1505190	1509667	23	-0.6678
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	20	1515454	1530207	34	-0.0762
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	20	1538257	1541893	5	1.2674
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	20	1545946	26214098	18809	0.0126
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	20	26214313	29299132	78	0.2646
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	20	29302279	62426597	22381	0.0157
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	21	9758742	17032901	2386	0.0162
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	21	17034833	17035658	4	-1.1173
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	21	17036229	46921385	22037	0.0137
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	22	14432528	21082462	3646	0.1167
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	22	21082680	21082880	4	1.1075
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	22	21087321	30107607	6405	0.0404
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	22	30108581	30110569	2	-1.6851
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	22	30114918	35002522	3899	0.0194
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	22	35005353	35049109	43	0.285
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	22	35049131	36072938	707	0.0144
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	22	36078675	36079892	4	-0.7406
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	22	36080613	37620866	768	0.0187
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	22	37625201	37626850	3	-3.297
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	22	37629060	40647057	1642	0.0167
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	22	40647871	40675487	13	0.4048
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	22	40676140	41296372	331	0.0661
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	22	41296643	41303145	2	1.3492
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	22	41303646	47073530	4354	0.0234
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	22	47075323	47075921	3	-0.8684
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	22	47076155	47182177	129	0.0069
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	22	47182576	47183141	3	-0.7467
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	22	47183767	47654704	378	0.0257
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	22	47655927	47656546	2	-1.3497
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	22	47659295	49581321	1235	0.1592
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	X	108477	152476922	83726	0.0146
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	X	152478627	152484242	9	0.5439
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	X	152486930	153211612	278	0.0151
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	X	153213851	153219925	6	0.6303
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	X	153220619	153274213	62	0.3052
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	X	153274581	154835548	554	0.0201
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	Y	2710438	6161425	839	-2.4169
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	Y	6167901	6489434	131	-3.5198
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	Y	6498630	7459842	416	-2.7146
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	Y	7460746	10369564	1202	-3.1134
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	Y	10384614	13534015	696	-2.7927
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	Y	13535818	13540211	5	-6.1534
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	Y	13541682	14099670	249	-2.9026
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	Y	14099736	14103917	3	-7.598
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	Y	14104283	17572959	1838	-2.9307
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	Y	17577516	17674648	37	-3.3179
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	Y	17676255	17688934	8	-5.9852
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	Y	17691665	17800753	50	-3.3973
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	Y	17801042	18080026	144	-2.8186
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	Y	18080874	19547685	705	-3.4494
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	Y	19547873	22063159	977	-2.9813
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	Y	22093119	22099738	2	-8.8048
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	Y	22125089	22268551	73	-2.8609
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	Y	22268856	24627620	513	-3.4104
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	Y	24632208	24919963	80	-2.4921
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	Y	24920187	25846090	96	-3.9532
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	Y	25854303	26129939	91	-2.3304
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	Y	26130472	26861404	258	-3.5522
STALL_p_TCGA_b116_126_SNP_N_GenomeWideSNP_6_G09_781728	Y	26866725	57427647	176	-2.3827
