Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	1	3208470	36645252	17560	-9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	1	36645836	36645905	2	-3.5617
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	1	36646829	245880329	111378	0.0036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	2	474222	242124735	131191	0.0071
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	3	526235	127485075	69109	0.002
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	3	127485961	127488735	2	-1.3219
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	3	127489748	199023074	37188	2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	4	1043934	162413429	88923	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	4	162413794	162439787	16	-0.917
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	4	162439834	189836143	13697	4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	5	967233	164766196	91095	-2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	5	164768834	164779037	4	-1.0936
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	5	164779355	180293075	9295	0.002
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	6	959281	35778511	20551	0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	6	35779479	35830417	25	0.6039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	6	35833833	52327926	10227	0.007
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	6	52328752	52333625	6	0.9168
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	6	52344927	135377122	44466	-4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	6	135383947	135384931	2	-1.3639
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	6	135391263	157363089	14056	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	6	157364691	157366996	2	-1.2689
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	6	157367667	170745844	7047	0.0053
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	7	671810	158077879	81254	-3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	8	607667	145304484	81470	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	9	779932	140058573	67963	5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	10	405240	135075077	80784	3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	11	446120	101964716	56171	0.0026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	11	101965568	101967805	3	-1.3221
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	11	101969273	133647740	21009	0.0027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	12	760163	131671419	73876	0.0026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	13	18348806	58393895	23273	0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	13	58397130	58397222	2	-1.5744
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	13	58397424	66344836	3836	0.0035
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	13	66347322	66355646	4	-0.868
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	13	66363796	82220269	9730	0
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	13	82222618	82223273	3	1.0579
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	13	82223768	114005560	19733	-0.0035
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	14	19571208	105059083	49393	0
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	15	21238778	32254964	4515	-0.0044
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	15	32255098	32256427	2	-1.8409
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	15	32257251	99701830	39968	8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	16	593460	87907437	40839	-6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	17	933971	78510305	36956	2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	18	319586	75210228	42620	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	19	235018	63570038	23938	0.0055
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	20	403764	34933472	19435	3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	20	34933565	34934075	2	-1.1944
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	20	34934264	37915286	1989	-0.003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	20	37915859	37920853	4	-1.077
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	20	37920904	61690281	15829	0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	21	14269492	46503202	20563	-1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	22	15803930	47717016	16919	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C09_802114	X	3167107	154558783	63734	0.0016
