Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	51598	1243705	192	0.0029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	1258710	1286367	2	-1.4744
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	1286383	17055024	8632	0.0155
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	17062591	17133835	57	-0.4392
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	17133850	68254836	31484	0.0184
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	68255218	68261238	4	-1.2687
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	68261493	72541086	2591	0.0194
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	72541504	72583721	45	-0.8806
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	72583736	73626414	623	0.0179
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	73626735	73626872	2	-1.4665
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	73628554	80664416	4478	0.0156
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	80665366	80667175	2	-1.4265
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	80668534	103933882	14968	0.0134
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	103957166	103965022	10	-0.6498
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	103965310	105814899	946	0.0227
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	105820728	105823898	17	-2.0081
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	105825578	108535758	1942	0.0164
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	108536400	108539019	2	-2.1436
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	108540627	110029038	724	0.0117
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	110034497	110046521	19	0.9583
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	110047649	112491849	1954	0.0165
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	112497488	112507583	27	0.4682
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	112507585	143275941	5238	0.013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	143290448	143588102	14	-0.4758
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	143588253	147173241	1113	-0.0165
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	147173894	147689083	174	-0.5906
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	147689241	150822330	1499	-0.0193
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	150822391	150853164	32	-1.8405
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	150853200	151026302	173	0.0398
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	151028547	151034587	31	-0.4028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	151034883	167252439	11146	0.0138
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	167252925	167253835	5	-1.3285
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	167256010	173062889	3715	0.0169
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	173063028	173068477	18	-0.8326
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	173068495	177590361	3080	0.013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	177597151	177598005	2	-3.1794
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	177599938	177876681	177	-0.0357
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	177888555	177888704	2	-2.044
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	177889867	195005405	11396	0.0135
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	195005604	195082414	88	-0.4673
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	195083353	208137685	8816	0.0138
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	208148236	208150607	3	-1.9286
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	208153175	246815817	26945	0.0159
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	246815842	246875992	36	-0.7241
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	246885106	247191011	140	0.0118
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	2	2784	4194295	2992	0.0174
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	2	4194327	4201042	32	-0.5334
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	2	4201387	26746435	16089	0.0256
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	2	26747877	26748093	3	-1.2415
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	2	26751251	97484644	42207	0.0236
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	2	97507179	97607624	25	-0.6613
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	2	97610606	129354548	19029	0.0227
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	2	129354948	129356785	15	-0.7644
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	2	129356799	146578555	10481	0.0229
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	2	146580874	146583404	24	-1.9825
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	2	146594276	242738129	59138	0.025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	35345	26401195	19934	0.0181
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	26409128	26414347	5	-1.2308
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	26420977	65163493	25433	0.0143
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	65164275	65185492	53	-0.6944
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	65191389	75651239	7373	0.0106
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	75655239	75669495	6	-1.9192
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	75677871	100420474	11009	0.0173
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	100427148	100427989	14	-1.7008
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	100428085	100431746	13	-3.5148
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	100431759	100431998	9	-1.7631
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	100432004	159832812	36464	0.0142
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	159833578	159834239	2	-2.7483
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	159841566	162171613	1442	0.0161
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	162177802	162200860	21	-1.089
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	162209688	163995433	1147	0.0109
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	163995786	164108689	68	-1.4827
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	164109266	194360596	19191	0.0164
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	194360656	194365597	19	-1.0633
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	194369129	196085211	1144	0.0153
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	196085343	196087941	2	-1.4164
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	196091628	199380515	1560	0.0219
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	2281	9832514	5806	0.0127
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	9832726	9840596	27	-1.7359
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	9843312	34455449	16987	0.0163
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	34462895	34501120	38	-2.272
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	34506267	61619533	15077	0.0147
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	61623530	61624547	2	1.9418
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	61628281	63813764	1188	0.0098
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	63813833	63834508	7	-0.7356
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	63837162	68943659	3196	0.0265
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	68964800	68970737	5	0.9407
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	68977394	69027207	9	-0.007
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	69043083	69168574	68	-1.6785
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	69171930	69475459	12	-0.271
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	69477123	69512426	3	1.4997
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	69571393	70162233	318	0.0259
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	70162241	70266713	55	-0.5614
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	70270740	115727073	27593	0.0189
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	115727615	115729903	3	-3.0121
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	115733875	117903797	1294	0.0272
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	117909229	117909770	3	-1.4374
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	117910261	157187630	23425	0.0179
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	157187733	157187748	2	-1.7767
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	157187923	191261904	22307	0.0177
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	68532	80081	6	-0.082
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	82339	108481	17	0.627
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	112792	738748	285	0.0338
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	751371	840979	33	0.5421
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	841060	15771492	11861	0.0192
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	15772222	15773597	11	-0.8416
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	15776346	32142841	10145	0.0209
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	32145346	32194212	39	0.5101
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	32206044	45893294	8314	0.022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	45895779	45916139	12	-0.9908
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	45924261	96936826	28041	0.0201
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	96937285	96942439	2	-2.8391
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	96943590	97070877	82	0.0337
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	97074222	97125076	43	-0.8166
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	97125440	103879120	3887	0.028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	103888272	103888503	4	-1.0396
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	103888948	120445278	11370	0.0156
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	120452137	120495551	24	-0.8818
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	120496527	180722926	38910	0.0165
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	94661	199283	101	0.0082
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	202353	324015	99	-0.4624
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	325821	19927319	15154	0.016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	19927420	19929305	3	-1.397
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	19931217	26847004	4925	0.0168
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	26850078	26863894	8	-1.178
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	26866009	29958359	1467	0.006
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	29979615	30006876	12	-1.0885
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	30007656	31388802	657	0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	31394255	31404430	11	1.1214
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	31417903	32717405	567	-0.0261
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	32732282	32734596	6	-1.353
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	32758590	32798775	46	0.0825
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	32798790	32798808	2	1.7895
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	32798923	49038824	10374	0.0165
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	49039688	49043159	5	-0.8523
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	49054522	54039189	3318	0.0256
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	54039234	54039378	3	-1.3605
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	54039762	70230017	7660	0.0157
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	70235181	70238857	3	-1.3832
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	70242993	77493251	4637	0.018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	77496587	77525357	27	0.3622
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	77525815	162415714	54738	0.0171
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	162415915	162416038	2	-1.6978
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	162416121	170892930	6099	0.0172
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	52911	109215086	67363	0.0196
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	109216813	109224993	21	0.474
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	109225008	109228159	9	-0.0286
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	109228448	109241146	12	0.818
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	109241218	116944139	4749	0.0246
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	116944801	116946634	2	-1.4588
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	116949408	125832210	5280	0.0242
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	125832718	125834112	13	-0.8373
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	125834113	141407299	9938	0.0222
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	141408343	141434001	34	0.5047
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	141434097	142156294	463	0.0106
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	142156339	142165914	28	0.6168
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	142176424	142928980	469	-0.0051
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	142929090	143207033	106	-0.3427
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	143209120	144398818	766	0.0355
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	144401736	144401898	2	-1.2952
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	144411363	158819765	9238	0.0225
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	21254	584973	327	0.0125
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	585220	585875	6	0.8147
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	585892	585908	2	3.9614
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	591043	2234501	1308	0.0113
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	2234565	2246765	16	-0.6184
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	2257735	7174056	6171	0.0206
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	7181231	7825372	171	-0.2702
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	7836168	8055342	64	0.078
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	8055446	8145380	15	-0.4783
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	8145978	11986960	3215	0.0119
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	12025135	12038532	6	-2.5646
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	12071716	12291857	49	0.3313
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	12305298	25030439	10491	0.016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	25030494	25040167	23	0.5985
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	25047021	40891153	10162	0.0179
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	40897009	40897628	2	-1.7555
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	40902837	138891505	59662	0.0196
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	138892916	138894206	4	-1.2835
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	138894952	146268959	4246	0.0034
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	9	36587	25568450	22063	0.0159
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	9	25575167	25630498	46	-0.9042
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	9	25632614	43177963	9257	0.0164
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	9	43255666	44569219	90	-0.3437
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	9	44667855	44795733	36	0.8579
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	9	44806024	140211215	48402	0.0128
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	10	62759	24415269	19240	0.0171
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	10	24417680	24418060	11	-1.8198
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	10	24418914	81439930	34783	0.0141
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	10	81452221	81607600	25	-0.5837
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	10	81616642	110950017	19358	0.0149
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	10	110956741	110956869	3	-1.6866
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	10	110958010	135356694	17651	0.02
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	11	188510	4924226	2476	0.0241
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	11	4924693	4932848	31	-1.4246
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	11	4932910	4933483	12	-0.5026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	11	4933587	13232116	6592	0.0138
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	11	13233018	13234508	2	-1.5369
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	11	13234537	49664951	24762	0.0153
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	11	49667437	49714167	18	-0.6404
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	11	49714247	55133238	775	0.0081
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	11	55133253	55210152	47	0.3119
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	11	55217259	134449982	52424	0.0172
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	20703	8238072	5550	0.0134
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	8248774	8269518	12	0.594
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	8285095	12427682	2714	0.017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	12427913	12433136	14	-0.7402
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	12434147	30131313	12291	0.0245
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	30131407	30134842	12	-0.7673
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	30134857	31160565	882	0.0231
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	31169298	31298390	91	0.5004
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	31301146	44186092	6954	0.0102
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	44190705	44195804	4	-1.4934
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	44199559	128566539	54158	0.0157
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	128569443	128569547	2	-1.7745
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	128569723	132288262	2376	0.0091
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	13	17924949	31430622	9637	0.012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	13	31430727	31436423	17	-0.803
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	13	31438047	65925436	21997	0.0185
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	13	65929274	65929499	3	-1.2525
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	13	65931781	114126499	32628	0.0166
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	14	18072124	18730853	47	-0.0903
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	14	18759317	18763249	3	-1.3408
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	14	18767885	69087800	31633	0.0147
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	14	69088121	69092220	8	-0.8032
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	14	69092466	73301822	2741	0.01
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	14	73314111	73315360	3	-1.1088
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	14	73317163	106356482	21130	0.0189
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	15	18276341	18700552	68	-0.0636
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	15	18706152	19911350	280	-0.4411
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	15	19911396	20088838	73	-0.7414
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	15	20224763	30644704	5900	0.0194
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	15	30644774	30664276	4	-0.9929
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	15	30690275	32466069	1481	0.0245
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	15	32481928	32618236	77	-0.7128
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	15	32643110	74678796	26461	0.0157
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	15	74678877	74682829	17	-0.4481
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	15	74682830	100286563	17681	0.0189
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	16	777	32496123	20163	0.0127
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	16	32496402	32496410	5	-3.5881
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	16	32516775	33539331	166	-0.3056
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	16	33550900	63905263	13205	0.016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	16	63908802	63910859	3	-1.127
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	16	63918452	72941759	5094	0.0149
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	16	72954559	73014102	9	-0.822
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	16	73022897	88675950	13858	0.0152
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	16	88683026	88815036	8	-0.2708
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	17	526	18299671	11446	0.0121
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	17	18299674	18405311	26	-1.4997
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	17	18405946	41518916	12031	0.0115
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	17	41521621	41709662	122	0.8961
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	17	41717786	42002459	29	0.4594
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	17	42002576	78643088	21639	0.0174
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	18	1543	36514478	22839	0.0178
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	18	36514488	36519387	14	-0.8306
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	18	36522022	61353975	17129	0.0162
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	18	61353988	61355697	15	0.7049
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	18	61358176	67526541	4468	0.0239
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	18	67527288	67527303	2	-1.3
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	18	67529832	69098089	1196	0.0388
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	18	69099171	69099263	3	-1.2855
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	18	69099278	76116029	5134	0.0253
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	19	41910	20386516	8986	0.0197
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	19	20388046	20513074	72	-0.8494
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	19	20513302	40350568	7592	0.0115
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	19	40355614	40355683	2	-1.839
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	19	40355724	40541162	172	0.0214
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	19	40541333	40558626	24	-0.3797
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	19	40558641	48158596	3806	0.0116
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	19	48159695	48316888	75	-0.8509
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	19	48320568	63789666	8628	0.0133
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	20	9305	62426597	42491	0.0176
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	21	9758742	10085461	90	-0.2757
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	21	10087945	21180477	5311	0.0175
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	21	21180943	21333132	116	0.5465
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	21	21333510	46921385	18883	0.0164
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	22	14432528	37695567	15525	0.0135
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	22	37699747	37705253	13	-1.0973
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	22	37719574	49581321	8026	0.0125
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	X	108477	9335009	5148	0.0172
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	X	9335872	9336235	2	-1.8535
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	X	9344230	124290884	61359	0.0192
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	X	124296342	124358305	40	-0.9125
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	X	124360169	139636495	8603	0.0141
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	X	139638357	139640599	4	-1.0317
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	X	139642922	154835548	9439	0.021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	2710438	3315255	205	-2.8311
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	3317144	5999989	565	-2.4644
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	6003672	14099670	2768	-3.0713
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	14099736	14103917	3	-7.6029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	14104283	17679836	1880	-3.0799
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	17688729	17688934	3	-7.5064
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	17691665	18080874	195	-3.0507
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	18084284	19488345	674	-3.6025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	19488618	22925190	1274	-3.0781
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	22925469	24599413	314	-3.587
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	24602438	25028523	96	-2.96
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	25040317	25649572	80	-4.0664
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	25664067	25938472	40	-2.6699
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	25944418	26009711	21	-3.7336
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	26011215	26130472	38	-2.6121
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	26130505	26687080	194	-3.5771
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	26699115	26731140	12	-5.0877
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	26731407	26866725	52	-3.4072
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	26868036	57427647	175	-2.7316
