Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	61735	1253842	192	0.0029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	1268847	1296504	2	-1.4744
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	1296520	17182437	8632	0.0155
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	17190004	17261248	57	-0.4392
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	17261263	68482248	31480	0.0184
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	68482630	68488650	4	-1.2687
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	68488905	72768498	2671	0.0157
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	72768916	72811133	45	-0.8806
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	72811148	73853826	623	0.0179
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	73854147	73854284	2	-1.4665
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	73855966	80891828	4477	0.0157
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	80892778	80894587	2	-1.4265
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	80895946	104132359	14960	0.0136
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	104155643	104163499	10	-0.6498
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	104163787	106013376	946	0.0227
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	106019205	106022375	17	-2.0081
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	106024055	110227515	2668	0.0135
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	110232974	110244998	19	0.9583
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	110246126	112690326	1954	0.0165
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	112695965	112706060	27	0.4682
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	112706062	148906617	6361	0.0069
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	148907270	149422459	174	-0.5906
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	149422617	152555706	1500	-0.0192
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	152555767	152586540	32	-1.8405
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	152586576	152759678	173	0.0398
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	152761923	152767963	31	-0.4028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	152768259	168985815	11145	0.0137
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	168986301	168987211	5	-1.3285
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	168989386	174796266	3715	0.0169
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	174796405	174801854	18	-0.8326
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	174801872	179323738	3080	0.013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	179330528	179331382	2	-3.1794
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	179333315	179610058	177	-0.0357
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	179621932	179622081	2	-2.044
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	179623244	196738782	11396	0.0135
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	196738981	196815791	88	-0.4673
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	196816730	210071062	8817	0.0138
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	210081613	210083984	3	-1.9286
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	210086552	248749194	26941	0.016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	248749219	248809369	37	-0.7327
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	1	248818483	249224388	140	0.0118
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	2	12784	4216420	2992	0.0174
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	2	4216452	4223167	32	-0.5334
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	2	4223512	26892931	16087	0.0256
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	2	26894373	26894589	3	-1.2415
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	2	26897747	98118212	42198	0.0236
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	2	98140747	98241192	25	-0.6613
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	2	98244174	129638078	19028	0.0227
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	2	129638478	129640315	15	-0.7644
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	2	129640329	146862085	10478	0.0229
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	2	146864404	146866934	24	-1.9825
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	2	146877806	243089456	59141	0.025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	60345	26426191	19934	0.0181
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	26434124	26439343	5	-1.2308
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	26445973	65188453	25433	0.0143
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	65189235	65210452	53	-0.6944
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	65216349	75568549	7372	0.0106
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	75572549	75586805	6	-1.9192
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	75595181	98937784	11004	0.0172
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	98944458	98945299	14	-1.7008
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	98945395	98949056	13	-3.5148
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	98949069	98949308	9	-1.7631
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	98949314	158350118	36463	0.0142
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	158350884	158351545	2	-2.7483
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	158358872	160688919	1442	0.0161
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	160695108	160718166	21	-1.089
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	160726994	162512739	1147	0.0109
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	162513092	162625995	68	-1.4827
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	162626572	192877902	19192	0.0164
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	192877962	192882903	19	-1.0633
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	192886435	194603922	1144	0.0153
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	194604054	194606652	2	-1.4164
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	3	194610339	197896118	1560	0.0219
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	12281	10223416	5806	0.0127
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	10223628	10231498	27	-1.7359
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	10234214	34779054	16987	0.0163
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	34786500	34824725	38	-2.272
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	34829872	61936938	15074	0.0146
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	61940935	61941952	2	1.9418
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	61945686	64131169	1188	0.0098
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	64131238	64151913	7	-0.7356
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	64154567	69372003	3219	0.0281
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	69374941	69485979	65	-1.7026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	69489335	70127644	329	0.0157
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	70127652	70232124	55	-0.5614
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	70236151	115507624	27597	0.0189
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	115508166	115510454	3	-3.0121
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	115514426	117684349	1294	0.0272
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	117689781	117690322	3	-1.4374
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	117690813	156968180	23429	0.0179
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	156968283	156968298	2	-1.7767
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	4	156968473	191027923	22306	0.0178
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	15532	27081	6	-0.082
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	29339	55481	17	0.627
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	59792	685748	284	0.0349
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	698371	787979	33	0.5421
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	788060	15718492	11864	0.0192
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	15719222	15720597	11	-0.8416
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	15723346	32107084	10144	0.0209
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	32109589	32158455	39	0.5101
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	32170287	45857537	8312	0.0219
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	45860022	45880382	12	-0.9908
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	45888504	96911070	28041	0.0201
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	96911529	96916683	2	-2.8391
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	96917834	97045121	82	0.0337
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	97048466	97099320	43	-0.8166
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	97099684	103851221	3888	0.0281
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	103860373	103860604	4	-1.0396
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	103861049	120417379	11370	0.0156
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	120424238	120467652	24	-0.8818
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	5	120468628	180790320	38911	0.0165
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	149661	254283	101	0.0082
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	257353	379015	99	-0.4624
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	380821	19819340	15153	0.0161
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	19819441	19821326	3	-1.397
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	19823238	26739025	4925	0.0168
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	26742099	26755915	8	-1.178
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	26758030	29850380	1467	0.006
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	29871636	29898897	12	-1.0885
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	29899677	31280823	657	0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	31286276	31296451	11	1.1214
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	31309924	32622194	569	-0.0255
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	32624304	32626618	6	-1.353
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	32650612	32690797	46	0.0825
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	32690812	32690830	2	1.7895
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	6	32692227	171051005	86871	0.0172
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	43355	109427850	67365	0.0196
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	109429577	109437757	21	0.474
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	109437772	109440923	9	-0.0286
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	109441212	109453910	12	0.818
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	109453982	117156903	4750	0.0247
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	117157565	117159398	2	-1.4588
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	117162172	126044974	5280	0.024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	126045482	126046876	13	-0.8373
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	126046877	141760830	9939	0.0222
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	141761874	141787532	34	0.5047
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	141787628	142476719	463	0.0052
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	142476764	142486345	28	0.6168
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	142486495	143218858	467	-0.006
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	143218968	143576100	106	-0.3427
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	143578187	144767885	766	0.0355
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	144770803	144770965	2	-1.2952
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	7	144780430	159127004	9239	0.0225
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	31254	594973	327	0.0125
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	595220	595875	6	0.8147
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	595892	595908	2	3.9614
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	601043	2247094	1309	0.0112
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	2247158	2259358	16	-0.6184
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	2270328	7186646	6171	0.0206
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	7193821	7787962	171	-0.2702
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	7798758	8017932	64	0.078
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	8018036	8107970	15	-0.4783
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	8108568	11949551	3213	0.0117
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	11987726	12001123	6	-2.5646
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	12034307	12247486	49	0.3313
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	12260927	24974522	10492	0.016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	24974577	24984250	23	0.5985
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	24991104	40771996	10163	0.0179
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	40777852	40778471	2	-1.7555
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	40783680	138822323	59668	0.0197
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	138823734	138825024	4	-1.2835
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	8	138825770	146298155	4246	0.0034
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	9	46587	25578450	22066	0.0159
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	9	25585167	25640498	46	-0.9042
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	9	25642614	43187967	9262	0.0166
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	9	43315670	44629223	90	-0.3437
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	9	44727859	44855737	36	0.8579
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	9	44866028	141091394	48409	0.0127
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	10	72759	24375263	19239	0.0171
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	10	24377674	24378054	11	-1.8198
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	10	24378908	81449728	34774	0.0141
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	10	81462017	81617620	27	-0.4012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	10	81626662	88975520	5182	0.0143
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	10	88976597	89046064	7	-0.887
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	10	89046498	110960027	14174	0.0153
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	10	110966751	110966879	3	-1.6866
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	10	110968020	135506704	17651	0.02
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	11	198510	4967650	2475	0.0241
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	11	4968117	4976272	31	-1.4246
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	11	4976334	4976907	12	-0.5026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	11	4977011	13275540	6592	0.0138
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	11	13276442	13277932	2	-1.5369
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	11	13277961	49708375	24759	0.0153
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	11	49710861	49757591	18	-0.6404
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	11	49757671	55376662	775	0.0081
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	11	55376677	55453576	47	0.3119
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	11	55460683	134944770	52417	0.0173
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	150442	8346805	5550	0.0134
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	8357507	8378251	12	0.594
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	8393828	9612900	628	0.0128
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	9613915	9715565	38	0.2898
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	9728292	12536415	2047	0.0136
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	12536646	12541869	14	-0.7402
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	12542880	30240046	12289	0.0245
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	30240140	30243575	12	-0.7673
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	30243590	31265057	881	0.0228
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	31269298	31407123	91	0.4949
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	31409879	45899825	6953	0.0102
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	45904438	45909537	4	-1.4934
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	45913292	130000586	54155	0.0157
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	130003490	130003594	2	-1.7745
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	12	130003770	133778189	2376	0.0091
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	13	19026949	32532622	9636	0.0119
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	13	32532727	32538423	17	-0.803
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	13	32540047	67027435	21995	0.0185
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	13	67031273	67031498	3	-1.2525
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	13	67033780	115108397	32627	0.0166
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	14	19002124	19660853	47	-0.0903
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	14	19689317	19693249	3	-1.3408
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	14	19697885	70018047	31630	0.0147
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	14	70018368	70022467	8	-0.8032
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	14	70022713	74232069	2740	0.01
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	14	74244358	74245607	3	-1.1088
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	14	74247410	107285437	21131	0.0189
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	15	20016328	20440538	68	-0.0636
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	15	20446138	22409986	280	-0.4411
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	15	22410032	22587474	73	-0.7414
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	15	22673399	32857412	5901	0.0193
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	15	32857482	32876984	4	-0.9929
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	15	32902983	34678777	1481	0.0245
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	15	34694636	34830944	77	-0.7128
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	15	34855818	76891741	26458	0.0158
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	15	76891822	76895774	17	-0.4481
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	15	76895775	102469040	17680	0.0189
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	16	60777	32588622	20161	0.0127
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	16	32588901	32588909	5	-3.5881
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	16	32609274	33631830	166	-0.3056
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	16	33643399	65347762	13205	0.016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	16	65351301	65353358	3	-1.127
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	16	65360951	74384258	5014	0.0169
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	16	74397058	74456601	9	-0.822
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	16	74465396	90148449	13859	0.0151
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	16	90155525	90287535	10	-0.2726
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	17	526	18358946	11447	0.0122
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	17	18358949	18464586	26	-1.4997
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	17	18465221	44163098	12029	0.0115
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	17	44165803	44353885	122	0.8961
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	17	44362009	44647143	29	0.4594
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	17	44647260	81049726	21640	0.0174
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	18	11543	38260480	22838	0.0178
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	18	38260490	38265389	14	-0.8306
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	18	38268024	63202995	17128	0.0162
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	18	63203454	63204717	14	0.7138
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	18	63207196	69375561	4468	0.0239
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	18	69376308	69376323	2	-1.3
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	18	69378852	70947109	1196	0.0388
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	18	70948191	70948283	3	-1.2855
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	18	70948298	78015057	5134	0.0253
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	19	90910	20594676	8985	0.0196
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	19	20596206	20721234	72	-0.8494
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	19	20721462	35658728	7592	0.0115
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	19	35663774	35663843	2	-1.839
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	19	35663884	35849322	172	0.0214
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	19	35849493	35866786	24	-0.3797
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	19	35866801	43466756	3806	0.0116
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	19	43467855	43625048	75	-0.8509
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	19	43628728	59097854	8628	0.0133
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	20	61305	62956153	42494	0.0177
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	21	10736871	11063590	90	-0.2757
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	21	11066074	22258606	5311	0.0175
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	21	22259072	22411261	116	0.5465
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	21	22411639	48096957	18882	0.0164
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	22	16052528	39365621	15524	0.0135
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	22	39369801	39375307	13	-1.0973
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	22	39389628	51234455	8027	0.0125
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	X	168477	9375009	5148	0.0172
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	X	9375872	9376235	2	-1.8535
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	X	9384230	124463203	61344	0.0195
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	X	124468661	124530624	40	-0.9125
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	X	124532488	139808829	8606	0.014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	X	139810691	139812933	4	-1.0317
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	X	139815256	155182354	9438	0.021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	2650438	2985595	152	-2.8483
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	2985939	5949434	655	-2.4029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	5949944	15590276	2771	-3.0647
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	15590342	15594523	3	-7.6029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	15594889	19170442	1884	-3.0748
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	19179335	19179540	3	-7.5064
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	19182271	19571480	195	-3.0507
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	19574890	21028957	674	-3.6025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	21029230	24515802	1275	-3.0766
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	24516081	26190025	314	-3.587
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	26193050	26619135	96	-2.96
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	26630929	27240184	80	-4.0664
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	27254679	27529084	40	-2.6699
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	27535030	27600323	21	-3.7336
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	27601827	27721084	38	-2.6121
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	27721117	28277692	194	-3.5771
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	28289727	28321752	12	-5.0877
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	28322019	28457337	52	-3.4072
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C10_802024	Y	28458648	59018259	175	-2.7316
