Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	51598	25455928	14162	0.0082
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	25465715	25519533	27	0.6774
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	25519573	72541504	28778	0.018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	72541524	72583721	44	0.9726
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	72583736	103904753	20055	0.0212
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	103910761	103979561	29	0.5077
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	104023054	104027091	11	-0.1179
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	104041212	104104926	14	1.0904
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	104105024	105820728	920	-1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	105820759	105823898	16	1.1113
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	105825578	110028919	2666	0.014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	110029023	110044476	20	-0.5631
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	110046521	112491771	1954	0.0133
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	112491849	112498697	20	0.4384
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	112498711	143553915	5250	0.0173
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	143560896	143579717	5	1.0847
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	143580441	150822419	2793	0.0292
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	150822508	150853164	30	0.4357
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	150853200	151026302	173	0.0343
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	151028547	151035324	37	0.3709
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	151040529	167483561	11334	0.0246
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	167500598	167508390	7	0.9577
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	167509025	194994473	18186	0.0211
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	194997658	195089940	97	-0.3212
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	195090236	201731555	4314	0.0204
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	201731898	201737280	3	-1.4148
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	201740479	227458331	17307	0.0194
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	227462931	227465015	2	-2.4452
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	227467575	241785031	10822	0.0233
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	241785107	241788235	2	-1.6324
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	241788349	246885106	3352	0.0129
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	246891760	246898877	5	-1.2945
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	1	246900588	247191011	133	0.0049
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	2	2784	4181455	2986	0.0075
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	2	4183562	4201387	38	-0.4371
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	2	4201442	51461788	33389	0.0194
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	2	51468955	51470298	2	-1.8324
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	2	51470625	52608065	781	0.0135
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	2	52608232	52608385	3	-2.4178
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	2	52612257	52635001	30	-0.3388
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	2	52635008	86791198	21945	0.0213
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	2	86806581	86807365	2	-1.6845
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	2	86823917	117302119	13535	0.0213
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	2	117305056	117306323	3	-1.3409
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	2	117307715	123192219	3757	0.0199
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	2	123192888	123198711	11	-0.7068
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	2	123200123	146581564	14393	0.0234
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	2	146581653	146583404	17	0.8909
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	2	146594276	208063200	36976	0.0202
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	2	208063423	208067581	16	-0.8533
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	2	208067721	212894794	3043	0.0213
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	2	212895448	212900070	24	-0.8804
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	2	212900371	242738129	19069	0.0195
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	3	35345	68828854	47847	0.0203
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	3	68828949	68830103	14	-1.6108
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	3	68831448	96938796	14094	0.0155
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	3	96949570	96950800	2	-3.027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	3	96951370	99382109	1255	0.0186
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	3	99391360	99397507	4	-1.5693
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	3	99398638	99880198	295	0.0483
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	3	99889994	99890090	4	-0.728
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	3	99899664	100420474	296	0.0669
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	3	100427148	100432111	38	-0.6844
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	3	100433654	131258548	18739	0.0139
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	3	131259366	131288742	48	-0.4216
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	3	131288926	143999516	7754	0.0146
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	3	144000058	144002869	2	-1.6687
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	3	144006039	150445666	4160	0.0218
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	3	150446085	150450811	25	-0.8013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	3	150453770	163995786	8345	0.0135
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	3	163995843	164109297	69	0.6467
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	3	164111308	194360596	19188	0.019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	3	194360656	194365597	19	-1.2157
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	3	194369129	196757361	1482	0.0198
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	3	196760499	196932593	32	-0.4003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	3	196941179	199380515	1193	0.0028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	2281	566267	276	0.0241
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	567749	570089	2	-1.409
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	571648	9819488	5525	0.0173
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	9832514	9844366	35	1.3022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	9845240	9999813	171	-0.0301
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	10001452	10009766	16	-2.537
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	10011816	34455449	16796	0.0192
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	34462895	34494875	32	-0.5453
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	34495165	68902978	19472	0.0219
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	68909443	69166704	87	0.4556
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	69168435	115393149	27736	0.0214
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	115394772	115401624	23	-1.2313
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	115403678	134706461	11269	0.0235
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	134709024	134709779	4	-1.0888
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	134711356	140129164	3283	0.0218
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	140130874	140133434	2	-1.3999
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	140135412	140448457	234	0.0075
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	140451996	140457810	6	-1.0301
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	140459145	149706079	5590	0.0172
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	149712643	149712952	3	-2.3007
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	149713604	162093450	7639	0.0214
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	162099468	162104369	22	-0.4117
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	162104408	165788632	2389	0.0216
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	165796220	165812584	12	-0.8007
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	165823548	172605921	4265	0.0224
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	172611459	172614019	8	2.1305
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	172614033	173224503	401	0.0185
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	173225723	173226108	12	-1.8033
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	173232554	189458252	10938	0.0212
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	189458354	189459807	5	-1.0246
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	4	189460047	191261904	1175	0.0566
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	5	68532	46287063	30793	0.0174
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	5	46306765	46309259	8	1.2284
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	5	46313969	57357403	5078	0.0227
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	5	57361784	57369272	31	1.7153
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	5	57369290	57679839	247	0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	5	57681959	57685055	4	-1.6618
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	5	57688925	113991773	33468	0.0217
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	5	113991920	113992132	2	-2.1107
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	5	113996573	151494364	23924	0.0196
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	5	151495579	151498544	14	-0.8494
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	5	151500464	180722926	19507	0.0149
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	94661	199283	101	0.0095
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	202353	239725	22	0.5672
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	239837	9157368	7286	0.0197
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	9166868	9320213	8	-0.9618
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	9365143	23850996	10817	0.019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	23852651	23853409	2	-3.1079
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	23855711	26847004	2047	0.0169
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	26850078	26863894	8	-2.3029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	26866009	26881042	11	-0.4502
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	26881488	27198383	140	0.0078
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	27202935	27203113	2	-3.1353
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	27203688	29945051	1294	0.0075
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	29945166	29957246	16	-0.9345
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	29958175	31388802	671	-0.0265
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	31394255	31403932	8	-1.4282
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	31403966	32539270	505	-0.0471
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	32539530	32669273	36	1.103
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	32678024	32798005	80	0.264
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	32798775	32798808	3	3.0338
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	32798923	54039043	13694	0.0153
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	54039110	54039762	6	2.6198
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	54039814	58530601	2417	0.0318
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	58534011	58535028	4	-3.2284
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	58540533	75785064	8846	0.0213
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	75788044	75792363	5	-1.358
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	75798644	77071668	725	0.05
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	77073620	77073631	2	1.3689
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	77073646	77493251	296	0.0354
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	77496587	77509101	15	-3.9162
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	77509111	77509476	6	-1.4809
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	77517792	103844732	16573	0.022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	103844777	103866351	37	-0.2929
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	103866418	126224456	13899	0.0206
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	126225385	126228469	3	-2.5769
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	126230586	160952555	23060	0.0194
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	160952709	160953273	5	1.129
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	6	160988032	170892930	7261	0.019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	7	52911	16663963	11433	0.0202
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	7	16666972	16668369	10	-0.906
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	7	16676233	28179497	8792	0.0229
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	7	28180922	28181653	2	-2.9696
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	7	28183905	38264847	7192	0.0186
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	7	38269645	38369021	124	0.2572
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	7	38370912	54353999	11011	0.0241
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	7	54354003	54354011	5	2.3597
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	7	54360982	70058374	6297	0.0196
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	7	70061186	70064077	2	-2.5096
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	7	70066179	81893539	6177	0.0206
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	7	81894544	81945404	41	0.6113
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	7	81946562	103335292	12406	0.022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	7	103336960	103337002	2	-1.8062
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	7	103345054	125832159	13938	0.025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	7	125832210	125833851	13	1.2967
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	7	125834112	133435717	4706	0.0221
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	7	133435735	133446174	25	-1.9291
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	7	133446205	142154515	5701	0.0259
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	7	142156294	142159241	7	-3.4129
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	7	142159298	142165268	15	-1.3868
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	7	142165340	142165614	5	-2.9749
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	7	142165684	152778571	6466	0.0166
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	7	152778578	152778645	2	-2.6661
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	7	152778648	158819765	4114	0.0178
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	8	21254	18309434	16746	0.02
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	8	18310437	18315465	4	-1.806
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	8	18315667	143231478	78121	0.0212
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	8	143232724	143233785	2	-2.1311
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	8	143233913	144370533	421	0.003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	8	144370710	144370780	3	-1.0893
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	8	144376007	146268959	645	-0.0073
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	9	36587	43177963	31364	0.0199
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	9	43255666	43740182	41	0.6567
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	9	44054868	44190849	31	0.0957
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	9	44191224	45805240	108	-0.1212
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	9	45928850	68456197	216	0.1284
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	9	68456317	68457304	2	-1.6309
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	9	68457967	73860829	2961	0.0577
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	9	73861539	73876458	13	-0.8173
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	9	73883969	90005508	11532	0.0599
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	9	90009583	90011933	5	-1.3602
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	9	90012866	140211215	33623	0.0541
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	10	62759	17934982	14882	0.0149
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	10	17967560	17989863	3	1.3477
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	10	18011822	24415269	4356	0.0149
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	10	24417680	24418060	11	0.8768
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	10	24418914	31286516	5045	0.0196
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	10	31291340	31291732	9	-0.7528
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	10	31291744	46501701	7389	0.0182
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	10	46504791	46519875	16	0.4566
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	10	46520662	47011195	42	0.1889
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	10	47012100	47213522	190	0.5057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	10	47241036	66976282	12792	0.0178
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	10	66977929	66996072	32	-0.4348
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	10	66996153	80921337	9239	0.0156
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	10	80953273	80963621	2	-3.1538
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	10	81006701	135084182	36922	0.0149
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	10	135092863	135227268	110	0.972
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	10	135237230	135356694	37	-0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	11	188510	4252332	1806	0.0127
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	11	4257932	4315864	18	1.1654
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	11	4341373	4924693	654	0.0256
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	11	4925086	4932281	28	-1.8396
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	11	4932833	4933468	13	-0.533
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	11	4933483	5744656	784	0.0253
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	11	5744668	5768936	34	0.3596
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	11	5772762	15289848	7021	0.0198
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	11	15290007	15290612	2	-1.4048
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	11	15293147	18896898	2393	0.0309
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	11	18897432	18897446	2	-0.5724
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	11	18905648	18917754	40	1.0464
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	11	18917857	18918498	15	0.616
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	11	18918511	55119916	21846	0.0209
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	11	55130608	55209585	59	-0.5315
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	11	55210152	81181116	14622	0.0203
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	11	81181640	81194806	10	-0.8857
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	11	81200280	106735929	17834	0.0243
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	11	106743866	106744338	7	-2.0108
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	11	106757572	134449982	19953	0.0146
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	12	20703	739459	419	-0.0062
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	12	739524	744290	16	-3.2814
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	12	745615	9525137	5771	0.0173
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	12	9529176	9619559	23	-1.6837
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	12	9626236	132288262	78830	0.0178
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	13	17924949	36968370	13558	0.0201
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	13	36969135	36982543	15	-0.545
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	13	36982732	37950811	703	0.0284
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	13	37955572	37956056	2	-2.1225
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	13	37963057	48429552	7333	0.0217
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	13	48431716	48434505	2	-2.8143
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	13	48435706	63122206	8339	0.0184
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	13	63122793	63132912	8	-1.1141
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	13	63134693	114126499	34322	0.0186
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	14	18072124	18627041	40	-0.0578
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	14	18632139	19493212	149	-0.4024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	14	19494766	69087800	31497	0.0204
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	14	69088121	69092220	8	-0.8545
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	14	69092466	73065527	2624	0.0123
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	14	73070876	73099653	10	0.9291
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	14	73099668	105531947	20781	0.0181
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	14	105550720	105553341	4	-1.3638
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	14	105558085	105867070	139	0.0861
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	14	105867273	105892781	10	1.158
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	14	105896961	105952397	31	-0.2475
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	14	105953387	106348399	266	0.1153
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	14	106351331	106356482	7	-0.2353
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	15	18276341	61709805	26906	0.0148
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	15	61712121	61718667	4	-1.9496
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	15	61721909	100286563	25134	0.0156
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	16	777	16646939	11826	0.014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	16	16654430	16693572	3	-1.189
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	16	16694595	21297471	2639	0.0178
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	16	21319904	21500956	24	-0.3954
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	16	21501135	22485104	371	-0.0216
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	16	22494966	22618243	67	-0.3666
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	16	22620480	29250102	4255	0.0113
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	16	29252941	29265852	5	-0.9619
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	16	29265865	54354095	8144	0.0183
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	16	54355723	54356280	3	1.8935
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	16	54361849	68694369	8782	0.0174
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	16	68697043	68755897	17	0.6837
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	16	68768945	72941759	2506	0.0245
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	16	72954559	73014102	9	0.9635
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	16	73022897	85918894	12598	0.0122
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	16	85919332	85919365	2	-1.843
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	16	85921879	88815036	1266	-0.0248
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	17	526	41522273	23505	0.0127
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	17	41522318	41719947	121	0.5891
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	17	41750187	53042488	7060	0.0138
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	17	53043332	53043992	2	-2.0405
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	17	53046992	78643088	14606	0.0128
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	18	1543	76116029	50798	0.0157
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	19	41910	21631564	9697	0.015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	19	21633081	21635460	2	-1.9983
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	19	21636628	58210326	16224	0.0138
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	19	58210559	58244041	22	0.5372
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	19	58246052	60004424	1094	-0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	19	60004812	60005629	2	-1.6893
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	19	60006099	62827161	1792	0.0058
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	19	62828712	62833272	4	-1.0487
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	19	62834298	63632326	470	0.0146
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	19	63635220	63636187	2	-1.0923
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	19	63637868	63789666	52	-0.0236
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	20	9305	1508922	1205	0.0136
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	20	1508951	1541893	43	1.0787
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	20	1545946	62426597	41246	0.0157
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	21	9758742	9948776	28	0.5888
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	21	9952302	46921385	24373	0.0166
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	22	14432528	22660218	4616	-0.0031
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	22	22660269	22662625	3	-2.4382
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	22	22662933	22674422	4	-0.2252
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	22	22680529	22726814	19	0.715
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	22	22731529	49581321	18924	0.0104
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	X	108477	103144645	54395	0.0202
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	X	103145837	103192014	58	0.5528
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	X	103198403	154835548	30143	0.0194
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	Y	2710438	6161425	839	-2.7384
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	Y	6167901	6356423	85	-3.9951
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	Y	6359046	7459842	462	-3.0629
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	Y	7460746	10369564	1202	-3.3827
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	Y	10384614	14099670	951	-3.1218
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	Y	14099736	14103917	3	-7.6945
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	Y	14104283	17543786	1822	-3.2545
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	Y	17547696	17807379	113	-3.7466
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	Y	17809644	18080026	142	-3.1021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	Y	18080874	19547685	705	-3.741
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	Y	19547873	22063159	977	-3.2549
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	Y	22093119	22099738	2	-8.5123
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	Y	22125089	22268551	73	-2.9973
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	Y	22268856	24627620	513	-3.6585
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	Y	24632208	24818154	43	-2.918
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	Y	24819177	24826480	4	-5.2963
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	Y	24826889	24919963	33	-2.5865
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	Y	24920187	25649572	89	-4.2464
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	Y	25664067	26129939	98	-2.9505
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	Y	26130472	26687080	195	-3.7432
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	Y	26699115	26731140	12	-5.1482
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	Y	26731407	26833326	44	-3.5402
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C11_801978	Y	26847504	57427647	183	-2.8182
