Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	1	3208470	54890750	27268	0.0075
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	1	54891732	54892122	4	-2.0387
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	1	54893946	91690316	23636	0.0081
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	1	91691813	91692370	8	-1.1596
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	1	91692834	155938861	20499	0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	1	155938928	155941189	2	-2.635
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	1	155946738	245880329	57501	0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	2	474222	74448991	43239	0.0106
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	2	74449818	74450148	3	-1.4842
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	2	74450161	108755278	14343	0.0084
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	2	108755714	108755895	2	-1.9008
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	2	108756080	236414682	70245	0.0092
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	2	236415826	236419139	2	-2.6874
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	2	236420313	242124735	3320	0.0069
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	3	526235	199023074	106265	0.0047
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	4	1043934	66811948	36508	-0.0042
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	4	66813739	66814148	2	-3.1051
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	4	66820453	189836143	66106	-0.0029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	5	967233	154600345	84680	-0.004
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	5	154602173	154602710	2	-1.8518
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	5	154606366	180293075	15702	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	6	959281	5190273	3024	-0.0122
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	6	5191117	5193727	4	-1.8169
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	6	5196306	170745844	93336	-0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	7	671810	158077879	81230	-6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	8	607667	14302986	6304	-0.0028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	8	14303019	14321482	36	-0.8106
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	8	14321619	145304484	75099	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	9	779932	4595023	2727	0.0134
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	9	4601875	4601901	2	-1.8353
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	9	4603940	136827135	64118	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	9	136827869	136829142	2	-1.7847
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	9	136829465	140058573	1081	-0.0207
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	10	405240	135075077	80771	0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	11	446120	104551848	57674	0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	11	104555015	104575036	12	-0.7851
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	11	104578248	133647740	19495	0.0097
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	12	760163	131671419	73859	0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	13	18348806	114005560	56578	-0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	14	19571208	105059083	49377	0.0028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	15	21238778	54522160	17611	0.002
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	15	54522310	54523870	5	-1.1682
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	15	54525217	85226963	18038	0.004
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	15	85227034	85232152	4	-1.4518
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	15	85232202	99701830	8817	0.0043
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	16	593460	57480391	21983	0.0099
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	16	57480568	57485459	2	-2.3299
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	16	57485795	87907437	18843	-8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	17	933971	78510305	36956	0.0039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	18	319586	5088165	2375	9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	18	5088353	5088520	2	-1.4839
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	18	5089314	5711251	443	0.0076
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	18	5713461	5714537	4	-1.8382
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	18	5714668	75210228	39792	0.0025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	19	235018	63570038	23931	0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	20	403764	61690281	37249	0.0044
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	21	14269492	46503202	20563	0.0093
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	22	15803930	47717016	16904	0.0025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D02_802110	X	3167107	154558783	63717	0
