Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	1	3218610	247813706	128972	9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	2	484222	166778183	87589	0.0082
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	2	166781188	166781569	2	-1.6902
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	2	166788620	238922301	41689	0.007
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	2	238930130	239065638	78	0.5696
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	2	239074936	242476062	1803	0.0058
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	3	2212571	197538677	106269	0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	4	1053934	76312295	41035	-7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	4	76314293	76318507	3	-1.4828
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	4	76318979	87049377	6512	-0.0022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	4	87053153	87054976	2	-1.6263
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	4	87060893	188763651	55074	0.0037
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	5	914233	180360469	100395	0.002
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	6	1014281	149989457	84233	0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	6	149996720	149996994	2	-1.7688
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	6	149999787	170903919	12142	-0.0025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	7	705284	158385118	81247	0.0029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	8	617667	145232496	81459	0.0034
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	9	789932	28426553	17457	5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	9	28426757	28427231	4	-1.5443
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	9	28433220	140938752	50506	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	10	415240	135225087	80773	-1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	11	456120	134142530	77175	0.0027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	12	889902	133161346	73862	0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	13	19450806	114987458	56559	0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	14	20501368	105988038	49384	0.0024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	15	23687685	101884307	44479	4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	16	653459	89379936	40772	-0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	17	987221	53166794	22247	-0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	17	53171883	53196291	18	0.5185
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	17	53201453	80917016	14688	0
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	18	329586	77109240	42613	0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	19	284018	29860924	10254	-0.0028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	19	29861300	29865081	6	-0.9461
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	19	29865345	48531312	9484	0.0042
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	19	48531330	48531332	2	-1.2593
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	19	48531376	58878226	4190	0.0026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	20	455764	47117765	27301	-4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	20	47117776	47135894	3	-1.601
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	20	47136001	62219837	9952	0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	21	15347621	47678774	20564	-1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	22	17423930	49331012	16916	-0.0034
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	X	3157107	16256336	5164	0.0096
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	X	16260713	16261250	2	-1.7316
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	X	16261676	123595646	44823	0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	X	123596006	123596019	2	-1.8905
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D04_801974	X	123597537	154905589	13759	0.0063
