Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	61735	17235698	8849	0.0206
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	17235852	17261263	39	-0.4629
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	17261695	71065311	33088	0.0175
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	71066843	71069107	5	-1.4413
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	71070131	72768418	1058	0.0224
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	72768498	72811133	46	1.0997
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	72811148	106013376	21025	0.0218
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	106019205	106022375	17	0.7296
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	106024055	152555527	12701	0.0208
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	152555706	152586238	31	-1.5721
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	152586278	161479438	5481	0.0136
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	161496900	161618251	30	0.5149
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	161618549	161636985	18	0.0144
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	161637159	161656498	15	0.5133
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	161658658	169216937	6000	0.0195
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	169233974	169238558	4	-2.7326
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	169238731	169241766	3	-1.1216
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	169242401	196727850	18190	0.0209
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	196731035	196732086	3	-1.5437
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	196738623	196823317	94	0.3905
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	196823613	222366668	17433	0.0217
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	222374834	222377004	2	-2.8874
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	222382134	223016406	335	0.0033
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	223017325	223023604	5	-2.0118
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	223023769	229811169	4107	0.0166
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	229816856	229820196	3	-2.8725
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	229820456	249224388	14056	0.0204
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	12784	4205687	2988	0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	4213864	4222649	34	0.5258
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	4222703	13529853	7166	0.0242
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	13534976	13537390	3	-1.5618
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	13537736	14706056	856	0.0523
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	14706269	14707038	8	-1.5336
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	14710021	52743925	26139	0.0228
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	52754468	52781542	40	0.6065
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	52787949	63314410	6886	0.0187
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	63321328	63326610	2	-2.2171
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	63327031	69913063	4447	0.0204
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	69915476	69921844	5	-1.1627
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	69921849	86937687	10595	0.0228
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	86953070	86953854	2	-2.1651
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	86970406	146862085	31687	0.0232
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	146864404	146866934	24	0.7051
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	146877806	184084153	22861	0.0222
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	184085453	184093998	11	-0.8776
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	184094262	213186549	17172	0.0299
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	213187203	213192828	30	-0.7233
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	213192844	213374480	126	0.0242
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	213374785	213375866	2	-1.7441
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	213376304	232394519	12276	0.0247
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	232396105	232400227	3	-1.4022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	232401468	243089456	6656	0.0186
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	60345	23979303	17921	0.0211
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	23981429	23982328	2	-3.0301
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	23982330	37977417	9764	0.0186
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	37982108	37986807	16	-1.1327
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	37986883	68746259	20150	0.0147
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	68746284	68747413	13	-1.5356
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	68748758	75421170	4874	0.0116
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	75427107	75639507	76	-0.7571
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	75645384	98937784	10995	0.0181
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	98944458	98949308	36	-2.1329
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	98949314	129760622	18742	0.0192
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	129761124	129819638	66	0.2879
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	129828078	131989347	1431	0.0244
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	131992737	131995684	4	-1.8815
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	132000477	136019099	2588	0.0098
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	136022951	136025426	2	-2.4324
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	136038541	140542539	2701	0.007
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	140545701	140546984	2	-2.659
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	140560618	154884802	8878	0.0201
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	154885111	154893951	3	-1.8885
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	154894968	192877902	23922	0.0181
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	192877962	192882903	19	-0.9692
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	192886435	195262872	1479	0.0182
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	195263161	195464124	48	0.4885
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	195464315	195700482	88	0.0033
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	195701115	195701328	3	1.4733
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	195709662	197896118	1089	0.042
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	4	12281	10223416	5806	0.0101
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	4	10223628	10231498	27	-1.7733
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	4	10234214	34779054	16989	0.0185
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	4	34786500	34824725	38	-2.3205
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	4	34829872	49267848	8985	0.0253
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	4	49291192	49291355	2	-2.3059
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	4	49297220	69372003	10508	0.0176
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	4	69374941	69596591	80	0.4272
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	4	69599531	70389716	479	0.055
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	4	70389861	70390779	2	-2.9917
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	4	70391888	86100896	9687	0.0137
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	4	86101088	86116288	13	-1.1897
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	4	86120444	161052774	44970	0.0206
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	4	161053591	161070504	35	-0.8068
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	4	161070578	161871883	587	0.0084
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	4	161873606	161885033	37	0.4143
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	4	161885123	180093706	11459	0.0228
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	4	180097988	180098338	2	-2.556
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	4	180101922	189221258	6562	0.0206
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	4	189221360	189221439	4	2.4674
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	4	189222813	191027923	1175	0.0261
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	5	15532	13157727	10320	0.0146
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	5	13162507	13169074	2	-2.3437
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	5	13169504	121071779	64262	0.0195
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	5	121074696	121074699	2	-3.9063
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	5	121077482	180378710	38310	0.0174
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	5	180378888	180433225	19	0.6836
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	5	180433264	180577235	94	-0.0391
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	5	180577677	180612926	20	0.5653
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	5	180612966	180790320	55	-0.1148
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	6	149661	258265	103	0.0125
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	6	260376	303121	24	0.5742
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	6	314962	29837188	21610	0.0144
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	6	29837314	29849267	14	-1.0795
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	6	29850196	58427069	17428	0.0097
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	6	58432574	58435428	4	-1.4849
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	6	58436237	66399772	2637	0.0205
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	6	66400229	66407127	17	-0.9622
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	6	66407210	77014948	6920	0.025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	6	77016900	77016926	3	2.5604
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	6	77016993	77436532	295	0.0048
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	6	77439868	77443247	11	-0.8456
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	6	77446199	78962874	987	0.0173
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	6	78962889	79039234	115	-0.699
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	6	79041633	103734829	15475	0.0163
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	6	103737976	103762061	46	-1.3326
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	6	103765470	133726276	18707	0.015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	6	133726502	133748758	25	-1.0092
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	6	133751173	171051005	25509	0.0172
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	43355	17551956	12131	0.0258
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	17559301	17563177	9	-1.2507
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	17563282	70420438	32728	0.0198
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	70423250	70426141	2	-2.9144
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	70428243	87665239	9592	0.0168
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	87670741	87671766	12	-0.8968
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	87672042	97385933	6252	0.0163
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	97385970	97402475	17	-0.8326
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	97404240	97417610	21	0.1172
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	97420649	97420652	3	-1.1607
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	97421090	97609366	82	-0.0222
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	97609419	97612048	4	-1.8083
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	97613771	103883264	2871	0.0184
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	103884332	103884677	2	-2.237
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	103884705	109441244	3673	0.0175
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	109441629	109459350	21	-0.5339
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	109459774	126045651	10026	0.0215
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	126045686	126046877	11	0.8427
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	126046878	142822210	10700	0.0145
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	142827954	142891721	32	-0.8976
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	142897770	143873952	565	0.0025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	143896252	144023399	35	0.4527
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	144027576	153147638	5590	0.0175
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	153147645	153147712	2	-2.4601
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	153147715	158705444	3810	0.0107
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	158705481	158863758	127	0.5468
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	158866660	159127004	179	-0.0566
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	8	31254	594973	329	0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	8	595220	595908	8	2.1352
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	8	601043	24974476	21508	0.011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	8	24974522	24979987	19	-2.1953
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	8	24984069	112294466	51146	0.0169
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	8	112294646	112295245	6	-1.6996
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	8	112295260	146298155	22937	0.0148
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	9	46587	43505852	31375	0.0211
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	9	43511711	43518992	3	-2.1115
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	9	43519288	43772050	30	-0.34
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	9	43776918	79769394	6990	0.0274
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	9	79770398	79786142	31	0.4693
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	9	79786214	140252788	41065	0.0165
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	9	140252947	140255833	4	1.6617
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	9	140273003	141091394	413	0.0272
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	10	72759	797509	419	0.0276
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	10	797961	800177	3	-2.3593
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	10	800213	17927554	14461	0.0194
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	10	17938208	17949857	2	2.8061
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	10	17971816	24375263	4357	0.0219
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	10	24377674	24378054	11	1.221
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	10	24378908	46931589	12327	0.018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	10	46932195	48005227	373	0.4862
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	10	48036571	57011530	5605	0.0228
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	10	57018033	57867602	603	-0.8814
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	10	57871756	135506704	52912	0.0133
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	11	198510	4967396	2475	0.016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	11	4967650	4976389	35	0.8077
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	11	4976493	5783923	792	0.009
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	11	5787405	5809461	35	-0.6132
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	11	5812360	18937467	9413	0.0089
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	11	18937632	18961988	63	0.3987
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	11	18962016	34639500	11345	0.0199
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	11	34641598	34789343	119	0.6095
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	11	34794024	51096372	9992	0.0168
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	11	51126742	51127104	2	-2.1554
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	11	51163249	134944770	52867	0.0145
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	12	150442	869109	418	0.0495
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	12	869198	874029	17	-1.018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	12	875354	9630556	5769	0.0251
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	12	9633870	9713674	22	-1.5956
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	12	9714954	27647907	12442	0.0195
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	12	27647980	27657161	26	-0.7686
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	12	27659514	38105716	5073	0.0327
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	12	38105787	38482987	64	0.8176
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	12	38491016	133778189	61225	0.0163
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	13	19026949	23629187	2895	0.032
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	13	23629210	23633515	13	-2.1292
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	13	23638195	49531551	18704	0.0172
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	13	49533715	49536504	2	-2.6022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	13	49537705	72476988	13528	0.0176
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	13	72477555	72479547	2	-2.3833
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	13	72480449	115108397	29137	0.0181
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	14	19002124	19382344	25	0.0677
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	14	19402242	20423372	165	0.6165
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	14	20424926	106776973	55055	0.0187
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	14	106777343	106820744	12	-1.0907
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	14	106821736	106912615	71	-0.2115
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	14	106912630	106939788	18	-0.7032
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	14	106943522	107285437	216	0.082
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	15	20016328	20269773	57	-0.0262
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	15	20284066	20581564	47	-0.7072
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	15	20585988	20586957	12	-2.3353
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	15	20590027	22285769	192	-0.752
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	15	22287270	24641397	1109	0.0035
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	15	24641662	24718173	47	-0.5445
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	15	24718596	102469040	50580	0.0148
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	16	60777	17387160	12233	0.022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	16	17387902	17388725	2	-2.1491
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	16	17389518	18742110	600	0.0159
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	16	18743062	18748576	2	-1.7306
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	16	18761093	19944363	690	0.025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	16	19945650	19970490	31	-0.7609
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	16	19970818	76798472	26603	0.0175
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	16	76798509	76806428	3	-1.7381
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	16	76808552	78371608	1612	0.0166
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	16	78372440	78381263	14	-2.365
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	16	78383140	90287535	10644	0.0203
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	17	526	15222631	9866	0.0199
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	17	15222718	15247754	13	-0.748
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	17	15247869	39421708	11086	0.0163
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	17	39423014	39430450	23	2.9056
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	17	39430531	81049726	24309	0.0172
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	18	11543	53303142	32999	0.0158
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	18	53308927	53318588	9	-1.0889
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	18	53323391	66742417	9570	0.0245
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	18	66742755	66750952	17	0.5786
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	18	66751045	78015057	8198	0.0143
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	19	90910	35849322	16824	0.0196
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	19	35849493	35861848	22	-1.5246
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	19	35866744	59097854	12514	0.017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	20	61305	1552174	1183	0.0085
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	20	1552430	1582092	59	-0.9746
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	20	1582207	16662218	11772	0.0192
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	20	16662745	16667772	13	-1.2336
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	20	16669877	39798163	12733	0.0196
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	20	39800528	39852095	25	0.5413
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	20	39856689	54750115	10996	0.0132
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	20	54751783	54754377	5	-1.2168
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	20	54758867	62956153	5711	0.0155
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	21	10736871	44968053	22633	0.0219
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	21	44970873	44972812	2	-2.4445
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	21	44973667	48096957	1766	0.031
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	22	16052528	16248691	38	0.3671
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	22	16248706	24271692	4552	0.0255
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	22	24271745	24344422	33	0.439
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	22	24350529	24370430	9	-1.0503
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	22	24371070	24385546	4	-3.498
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	22	24386631	42899440	12798	0.0196
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	22	42904606	42950491	23	0.5321
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	22	42955431	51234455	6105	0.0112
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	X	168477	135497722	72480	0.0189
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	X	135499659	135502946	6	-1.4019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	X	135505624	155182354	12095	0.0174
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	Y	2650438	2985595	152	-2.9609
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	Y	2985939	6035471	684	-2.3682
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	Y	6039351	6039663	2	-7.6439
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	Y	6048274	6101425	33	-2.3859
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	Y	6107901	6296423	85	-3.7633
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	Y	6299046	19063565	4467	-3.0141
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	Y	19068122	19170442	42	-3.5019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	Y	19179335	19179540	3	-7.6439
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	Y	19182271	19571480	195	-3.0564
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	Y	19574890	21024613	672	-3.5616
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	Y	21025062	23982659	1120	-3.009
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	Y	23984056	23993156	6	-4.5938
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	Y	23994788	24510518	149	-3.2042
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	Y	24514859	26222820	324	-3.5579
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	Y	26223131	26631228	90	-2.921
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	Y	26631371	27240184	78	-3.999
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	Y	27254679	27529084	40	-2.4939
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	Y	27535030	27600323	21	-3.6559
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	Y	27601827	27695095	32	-2.1405
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	Y	27717799	28423938	256	-3.6476
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	Y	28438116	59018259	183	-2.5796
