Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	1	3208470	245880329	128984	0.0039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	474222	63167914	36626	0.0065
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	63174832	63180114	2	-2.2323
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	2	63180535	242124735	94589	0.0081
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	526235	156367496	84715	0.0027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	156367805	156376645	3	-1.9046
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	3	156377662	199023074	21603	0.0028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	4	1043934	189836143	102652	0.0041
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	5	967233	180293075	100422	0.0036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	6	959281	133767969	74223	0.0022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	6	133768195	133782878	17	-0.9145
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	6	133792866	170745844	22160	0.0041
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	671810	103670500	52304	0.0047
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	103671568	103671913	2	-2.2515
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	7	103671941	158077879	28969	0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	8	607667	145304484	81483	0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	9	779932	140058573	67974	0.0041
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	10	405240	56577788	32554	0.0035
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	10	57011331	57532260	92	-1.0209
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	10	57545260	135075077	48169	2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	11	446120	133647740	77220	-6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	12	760163	131671419	73895	0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	13	18348806	68849725	28447	0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	13	68850657	68852366	2	-1.8753
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	13	68852920	114005560	28148	0.0031
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	14	19571208	105059083	49402	0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	15	21238778	99701830	44498	0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	16	593460	87907437	40849	0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	17	933971	78510305	36970	0.003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	18	319586	75210228	42624	7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	19	235018	61671194	22899	9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	19	61671687	61673194	3	-1.7954
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	19	61673363	63570038	1045	0.0172
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	20	403764	61690281	37267	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	21	14269492	46503202	20568	0.0043
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	22	15803930	47717016	16921	0.0033
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	X	3167107	135325388	55035	0.0039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	X	135327325	135330612	6	-1.4167
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D06_802032	X	135333290	154558783	8702	0.0086
