Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	1	3208470	113082711	63203	7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	1	113083220	113083872	2	-1.6637
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	1	113085602	245880329	65712	0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	2	474222	196148475	103758	0.0095
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	2	196151214	196151995	2	-1.7111
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	2	196152474	242124735	27392	0.0104
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	3	526235	7032492	2338	0.0154
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	3	7032845	7033682	3	-1.5157
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	3	7034279	21605426	9140	-0.0041
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	3	21605456	21606334	2	-2.1413
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	3	21606670	199023074	94793	-9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	4	1043934	189836143	102594	-0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	5	967233	180293075	100385	0.0028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	6	959281	170745844	96374	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	7	671810	144823250	74392	0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	7	144823651	144823826	2	-1.689
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	7	144823878	158077879	6841	0.0038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	8	607667	14391356	6392	0.0026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	8	14391437	14393609	3	-1.66
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	8	14396454	37324659	15196	-0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	8	37326977	37346889	25	-0.8878
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	8	37354229	145304484	59833	0.0022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	9	779932	17402099	9977	0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	9	17403556	17403714	2	-1.7781
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	9	17407517	32995741	9865	0.0073
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	9	32995757	32995763	2	-1.8866
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	9	32997206	140058573	48097	-0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	10	405240	135075077	80770	0
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	11	446120	59883974	32832	-0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	11	59884747	59884897	2	-1.8559
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	11	59885029	133647740	44339	0.0041
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	12	760163	131671419	73854	0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	13	18348806	114005560	56571	-2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	14	19571208	105059083	49375	-0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	15	21238778	78478091	32137	-0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	15	78480036	78481977	2	-1.7154
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	15	78482170	99701830	12329	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	16	593460	74352527	31427	-0.0033
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	16	74354462	74355880	2	-1.6902
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	16	74355992	87907437	9400	-0.0073
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	17	933971	78510305	36952	9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	18	319586	10740430	6117	0.0111
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	18	10741624	10742237	3	-1.5598
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	18	10742666	75210228	36482	0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	19	235018	63570038	23938	-0.0024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	20	403764	12975313	8015	0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	20	12977764	12977862	2	-2.0605
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	20	12982705	61690281	29232	-0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	21	14269492	46503202	20560	-0.004
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	22	15803930	47717016	16910	-3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	X	3167107	119455069	47920	0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	X	119455086	119455101	2	-1.6099
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E01_802012	X	119456969	154558783	15800	0.0012
