Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	61735	16895627	8727	0.0022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	16896821	17012785	53	0.3163
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	17016177	17195155	48	0.0598
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	17203497	17262247	60	0.4314
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	17276241	25583341	5269	0.0116
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	25593128	25646986	28	0.6053
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	25661501	35102654	4972	0.0099
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	35102670	35104491	19	-0.6874
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	35114268	47587188	6866	0.0084
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	47588479	47591608	2	1.4059
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	47593574	72768418	16987	0.0358
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	72768498	72773413	8	-1.1
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	72773429	72779080	3	-2.6413
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	72779091	72811904	37	-0.6902
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	72812440	110224384	23691	0.0381
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	110224427	110242953	32	-0.6986
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	110244998	152555527	10016	0.0378
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	152555706	152586238	31	0.6828
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	152586278	152761923	176	0.0485
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	152761939	152767963	30	0.5622
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	152768259	174796405	14862	0.0313
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	174796556	174801854	17	-0.6624
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	174801872	196686139	14628	0.0383
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	196688159	196812530	119	0.3945
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	196815791	210071062	8816	0.0381
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	210081613	210083984	3	-1.921
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	210086552	218180530	5677	0.0319
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	218182223	218182257	3	-1.2447
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	218193515	220087703	1351	0.0277
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	220088047	220117850	19	0.5003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	220132739	240366512	14098	0.0314
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	240367507	240367522	2	-1.2786
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	240367775	240391740	33	-0.1086
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	240394015	240394139	6	-1.8226
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	240396105	246567044	4421	0.0365
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	246567550	246567576	2	-1.4393
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	246567646	249224388	1505	0.0609
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	12784	3249662	2287	0.0278
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	3249910	3250383	4	-1.2328
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	3257281	4218008	707	0.0642
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	4218101	4219943	15	0.5395
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	4221821	34691069	21088	0.0432
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	34699315	34708632	7	-0.7424
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	34708650	34717908	22	-0.3106
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	34717974	34737057	17	-0.9313
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	34737163	52479329	12847	0.0508
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	52480194	52549542	44	0.3216
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	52549847	52754468	152	0.0727
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	52754480	52781542	39	-2.3476
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	52787949	54445843	1248	0.0364
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	54445901	54479646	25	0.4036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	54480369	86937687	20661	0.0375
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	86953070	86953854	2	-2.4083
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	86970406	129638911	21191	0.0386
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	129638961	129640297	9	-0.6515
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	129640315	146864583	10482	0.0371
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	146865079	146866934	19	0.9426
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	146877806	243089456	59129	0.042
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	60345	224602	157	0.0782
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	230022	232800	4	-0.9751
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	234877	6646543	5682	0.0679
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	6651128	6653332	23	-0.6363
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	6655078	26434124	14067	0.0342
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	26434295	26439343	4	-1.2175
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	26445973	53028375	15834	0.0186
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	53031736	53033148	13	0.7036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	53033540	68746259	12051	0.0234
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	68746284	68747413	13	1.189
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	68748758	162530870	55063	0.0308
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	162532950	162540490	7	-1.853
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	162545716	162908211	250	0.0677
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	162913852	162919747	10	0.64
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	162919851	165059385	1131	0.0273
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	165059463	165065181	26	0.4576
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	165065340	168730180	2076	0.0464
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	168733402	168738628	2	-2.0727
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	168739827	169348944	465	0.0447
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	169349862	169350604	2	1.245
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	169352458	173831144	2856	0.0372
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	173833892	173836784	2	-0.9787
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	173837333	175078480	886	0.0378
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	175078518	175086788	9	-0.5286
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	175086805	184397940	5459	0.038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	184399976	184416009	11	-0.5295
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	184417797	187586840	2211	0.0246
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	187587375	187594092	7	0.7011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	187594964	187596036	13	0.0381
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	187596140	187596524	10	0.5932
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	187596560	192607750	3614	0.0407
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	192607973	192608551	6	1.3042
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	192608598	196826424	2381	0.0257
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	196826689	196826777	2	1.6192
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	196830529	197896118	534	0.0507
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	12281	66719	58	0.0443
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	68821	777734	269	0.5731
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	782301	839937	17	0.0793
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	839978	10210390	5459	0.5084
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	10223416	10231498	28	1.3635
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	10234214	10235268	7	0.8955
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	10236142	10272093	42	0.5255
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	10272788	10273549	4	-0.1592
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	10273579	10390715	125	0.523
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	10392354	10400668	16	-0.5428
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	10402718	34678418	16731	0.5206
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	34685050	34687171	4	2.1718
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	34699894	34779054	61	0.5272
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	34786500	34824183	37	-0.3188
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	34824725	49267784	8984	0.533
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	49267848	49658612	25	-0.4769
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	52685699	69374955	10488	0.5205
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	69375160	69485979	63	0.9447
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	69489335	69582483	11	-0.1655
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	69591612	86974515	10816	0.5171
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	86975062	86976779	12	1.0471
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	86976794	108066145	12454	0.5185
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	108066158	108076023	30	0.9222
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	108076124	115173700	4414	0.5249
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	115175323	115184229	24	1.544
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	115184252	122825296	4706	0.5226
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	122825364	122829938	2	-0.8906
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	122830346	137938715	8428	0.5234
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	137938807	137971294	44	0.8443
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	137972114	161871760	14841	0.5148
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	161871782	161887545	49	0.9775
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	161888117	172374884	6655	0.5259
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	172374949	172377724	10	-0.1963
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	172377776	173428342	646	0.5636
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	173428471	173428643	3	-0.928
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	173441132	178596926	3094	0.5217
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	178597245	178597799	8	1.2188
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	178597876	183568672	3786	0.5383
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	183571340	183571406	2	-1.2008
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	183572352	185759930	1451	0.5375
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	185763293	185778750	11	-0.0639
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	185778979	191027923	3528	0.5405
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	15532	12824411	10229	0.5325
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	12826650	12838533	4	1.4598
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	12849201	16124245	2226	0.558
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	16125128	16125214	3	-1.5041
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	16127544	21370577	3261	0.546
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	21376844	21377853	3	1.4808
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	21386066	21445958	42	0.6772
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	21446059	21452438	8	1.1291
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	21452496	26789496	3159	0.5322
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	26797760	26797844	2	-1.4338
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	26803884	46196114	11848	0.5361
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	46199434	46199435	2	-1.8334
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	46209299	46271108	15	0.5154
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	46271930	46273502	6	1.7367
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	46278212	57321646	5077	0.5419
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	57326027	57338357	33	-0.1116
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	57340073	114756455	34255	0.5418
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	114756637	114756862	5	-1.161
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	114759078	117386617	2007	0.5451
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	117388422	117389085	11	-0.4821
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	117404340	119884573	1604	0.5284
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	119884992	119885348	2	-1.5976
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	119885929	128643629	5626	0.5336
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	128643798	128651108	5	-0.3559
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	128651624	137736611	5479	0.5228
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	137737055	137740637	5	1.4446
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	137745877	140218722	1098	0.502
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	140223836	140231839	10	1.134
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	140241027	151514171	7542	0.5333
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	151515386	151518351	14	-0.687
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	151520271	155472133	2657	0.5213
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	155475099	155495253	20	-0.3417
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	155495257	175460087	14096	0.525
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	175465689	175469507	2	-2.8703
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	175470324	177151104	724	0.5009
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	177157399	177198449	5	-0.3329
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	177227551	177232605	3	3.8615
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	177254965	180790320	2003	0.5174
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	149661	1670985	1358	0.4933
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	1671442	1681114	4	1.3872
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	1683847	4253413	2004	0.5106
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	4255745	4471635	213	-0.0907
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	4478070	29837188	18163	0.5
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	29837314	29874808	22	-0.778
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	29876959	30063368	110	0.4365
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	30064562	30065319	3	-0.8158
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	30065416	31280823	552	0.4713
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	31286276	31296451	11	-1.3126
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	31309924	32454523	510	0.4223
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	32456683	32601317	50	-0.2243
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	32602107	32622194	9	0.64
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	32624304	32626618	6	1.6374
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	32650612	53931380	13744	0.5038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	53931419	53931803	2	2.7177
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	53931855	64008124	3675	0.5089
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	64008189	66399482	1382	0.0064
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	66399537	66403852	23	-2.5838
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	66407127	70426459	2724	0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	70426479	72464676	1348	0.4811
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	72465909	73743798	853	-0.0104
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	73749874	77436532	2292	0.4624
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	77439868	77452446	17	-0.5265
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	77452641	78962626	981	0.4909
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	78962874	79032592	111	0.1641
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	79034940	81277987	1436	0.5046
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	81284189	81289534	33	-0.7053
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	81294341	84951849	2269	0.4922
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	84953140	103734825	11714	-0.8316
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	103734829	103765470	48	0.2888
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	103765670	167234596	41650	-0.8555
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	167234990	167237848	3	-3.6925
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	167237994	171051005	2387	-0.9251
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	7	43355	9428507	5616	0.0255
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	7	9430438	9430748	2	-1.4511
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	7	9431031	54380373	32933	0.0415
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	7	54386505	54386517	6	2.2015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	7	54393488	56941523	1622	0.0339
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	7	56945090	57154424	17	-0.4961
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	7	57155720	87657559	14250	0.0302
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	7	87665239	87672973	20	0.5005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	7	87673006	97385970	6244	0.0497
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	7	97395460	97402475	16	-0.6558
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	7	97404240	97404342	4	0.7216
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	7	97404513	102024263	2016	-0.0081
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	7	102025660	102026794	2	-2.7867
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	7	102031667	109433747	4607	0.0403
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	7	109433777	109458757	43	0.6173
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	7	109458772	126045556	10030	0.0436
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	7	126045651	126046615	10	-0.8996
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	7	126046876	159127004	21041	0.0332
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	31254	5075593	5395	0.0458
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	5075648	5075738	6	1.1498
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	5075852	5598786	699	0.0708
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	5598796	5604495	22	-0.6468
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	5607088	8017932	1946	0.0698
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	8018036	8072303	7	0.668
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	8087144	8385797	288	0.0065
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	8386150	8386442	4	-2.027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	8388307	12443055	3044	0.0185
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	12473543	12480678	8	-1.5505
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	12482047	12558929	23	-0.4264
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	12559835	18265154	5294	0.0444
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	18266157	18271185	4	-1.5325
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	18271387	39230659	14147	0.0269
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	39235603	39386965	59	-1.9885
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	39388299	112294466	42046	0.031
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	112294646	112295245	6	-1.7934
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	112295260	112842824	286	0.0435
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	112845559	112851872	4	-1.0497
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	112852290	115592427	1517	0.0298
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	115592897	115605615	3	0.6713
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	115608375	115635282	30	0.2154
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	115635354	115638838	8	0.6909
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	115640562	134172784	13066	0.0335
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	134172796	134173689	12	0.5212
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	134173806	146298155	8006	0.0205
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	9	46587	68920	8	-0.5739
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	9	88030	9821895	9375	0.0523
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	9	9822038	9823805	4	1.1124
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	9	9823820	12554019	2322	0.1039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	9	12554856	12562294	4	-1.1773
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	9	12565520	23361805	8733	0.0421
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	9	23363115	23373484	8	1.2335
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	9	23378488	39330197	10810	0.0516
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	9	39337293	39342825	3	-1.5718
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	9	39743166	40695900	27	0.0795
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	9	40784175	40811602	4	1.3159
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	9	40811997	43654980	87	0.1181
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	9	43658083	43800186	22	0.5578
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	9	44114872	65617146	182	0.018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	9	65630946	65672607	2	-1.626
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	9	66323059	127997303	41134	0.0319
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	9	128008139	128038495	6	0.7485
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	9	128039406	138151672	6010	0.0088
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	9	138153002	138309347	114	0.5049
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	9	138310423	141091394	1044	-0.0036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	72759	24377674	19235	0.0259
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	24377675	24378054	10	-1.9071
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	24378908	27587531	2201	0.0218
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	27593427	27597438	2	-1.6361
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	27607185	47771030	10485	0.0161
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	47897394	47948060	4	-1.7982
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	47960476	48736766	289	0.0361
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	48771950	48840627	3	1.1552
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	48883402	51231576	1373	0.0362
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	51335029	51397071	2	1.9893
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	51449369	51595847	59	-0.0089
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	51604698	51659444	4	-1.1457
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	51735651	58516813	4905	0.0632
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	58517060	58525513	26	0.4429
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	58525608	61364115	2092	0.0459
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	61364130	61364890	3	-1.0396
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	61364911	67306276	4032	0.0301
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	67307923	67311360	22	-0.3718
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	67313862	78252851	6807	0.0224
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	78257061	78257610	2	2.2082
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	78261267	81251331	2438	0.0368
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	81283267	81514190	24	-0.3651
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	81523306	88947061	5194	0.0194
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	88949427	89029243	13	-0.4896
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	89038341	135506704	31825	0.0304
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	11	198510	3158676	1197	-0.879
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	11	3162394	3164791	2	-4.0781
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	11	3165228	4970367	1270	-0.8139
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	11	4972005	4976272	23	-1.5877
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	11	4976334	18961178	10224	-0.8356
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	11	18961281	18970748	22	-0.1268
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	11	18971175	25201867	4916	-0.8212
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	11	25202373	25296993	81	-0.4782
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	11	25306213	25654182	258	-0.7781
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	11	25654935	25660676	3	-3.5007
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	11	25662734	47390114	14679	-0.8232
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	11	47393303	47394317	4	-2.6225
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	11	47396222	55363340	1778	-0.7657
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	11	55374032	55453576	60	-0.255
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	11	55460683	55807960	259	-0.7102
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	11	55807977	55812481	4	-2.4433
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	11	55813082	121483946	41741	-0.8223
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	11	121486633	121487346	3	-4.8336
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	11	121487417	134944770	10125	-0.8459
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	12	150442	9627238	6203	0.0323
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	12	9630556	9735686	29	0.4067
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	12	9736656	33294660	16630	0.0411
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	12	33301406	33307374	27	-3.0718
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	12	33308360	90483350	32907	0.0382
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	12	90491669	90492074	7	-0.994
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	12	90493557	99797089	6470	0.0321
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	12	99797809	99798526	8	0.723
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	12	99798589	100007372	141	0.0584
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	12	100007899	100008321	2	1.3311
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	12	100012691	114169163	9011	0.0265
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	12	114173469	114174845	3	-1.1391
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	12	114175202	119983825	4510	0.026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	12	119988887	119990748	15	-0.7336
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	12	119990761	133778189	9073	0.0239
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	13	19026949	19455651	129	-0.532
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	13	19455957	19732312	189	-0.8411
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	13	19733374	19733849	2	-3.2768
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	13	19734310	38071135	13141	-0.8256
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	13	38072036	38076267	5	0.4631
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	13	38076287	40769189	2001	-0.8033
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	13	40770928	40771303	2	-2.9266
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	13	40771689	44963463	2958	-0.8331
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	13	44967315	44984861	18	-1.6416
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	13	44986111	64491644	11507	-0.7984
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	13	64497248	64500259	4	-1.8051
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	13	64500692	69248630	2922	-0.7836
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	13	69248976	69264685	34	-0.3235
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	13	69268242	115108397	31068	-0.8268
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	14	19002124	19849591	65	-0.0466
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	14	19852833	19909264	3	-1.6647
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	14	19938441	23092105	2105	0.1067
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	14	23094845	23099209	7	-0.744
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	14	23099390	28481494	3372	0.0304
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	14	28483861	28484030	2	1.4678
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	14	28484921	40608928	7551	0.0362
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	14	40613922	40616919	2	-2.44
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	14	40618165	41607634	719	0.0615
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	14	41608358	41657349	16	-0.4366
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	14	41670102	41962224	221	0.0546
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	14	41965649	41965690	2	-1.2579
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	14	41966508	70018047	17613	0.0423
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	14	70018368	70022467	8	-3.0299
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	14	70022713	106530364	23439	0.0285
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	14	106530687	106567100	17	0.8468
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	14	106569463	107145564	320	0.1327
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	14	107152270	107160325	8	-1.7798
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	14	107160399	107285437	89	-0.0206
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	15	20016328	20581564	105	0.0966
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	15	20585988	20586957	12	-0.4841
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	15	20590027	21173886	150	0.2109
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	15	21186400	21192108	3	1.3271
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	15	21192211	21197360	4	0.5339
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	15	21200700	34739921	7555	0.0422
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	15	34745719	34746462	3	-2.0998
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	15	34747343	40243602	3948	0.0492
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	15	40245754	45223654	2334	-0.8423
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	15	45225257	45235082	7	-2.291
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	15	45238744	45832157	299	-0.8282
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	15	45833058	76891241	19893	0.0314
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	15	76891511	76895775	21	0.6082
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	15	76902179	102469040	17679	0.0328
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	16	60777	29272604	19148	0.0199
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	16	29276794	29281055	5	-1.5299
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	16	29281765	32303489	963	-0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	16	32307220	32743289	78	0.4135
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	16	32743481	33423063	66	0.0768
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	16	33432160	33627826	73	0.3799
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	16	33631830	55796594	6993	0.0313
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	16	55798222	55798779	3	2.6424
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	16	55804348	78371608	14445	0.0249
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	16	78372440	78379675	13	1.0001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	16	78381263	90287535	10640	0.0245
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	17	526	7258027	4102	-0.0054
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	17	7265349	7265806	2	-1.7735
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	17	7266476	44156081	19389	0.0167
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	17	44157487	44344859	121	0.413
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	17	44344893	77242007	19914	0.0334
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	17	77242279	77247044	9	0.6421
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	17	77247190	81049726	1750	0.0202
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	18	11543	38258082	22811	0.0373
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	18	38258096	38265389	32	0.5865
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	18	38268024	40051678	1214	0.0468
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	18	40056569	40058395	26	-0.5476
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	18	40060937	66742276	18487	0.0421
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	18	66742417	66757750	45	0.3974
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	18	66757787	78015057	8170	0.0648
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	90910	5506659	1599	-0.0286
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	5510239	5510653	3	-2.4487
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	5510700	8411656	1360	-0.0318
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	8412172	8414301	2	-2.2084
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	8421007	15147610	3243	-0.0357
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	15148830	15152305	4	-1.3394
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	15154126	19831544	2338	-0.0317
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	19835753	19836676	2	-1.6634
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	19840768	22652436	1614	0.0237
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	22656291	31284806	3505	0.8155
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	31288118	31288540	2	-1.0157
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	31290599	35857136	3161	0.8334
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	35857163	35861649	6	1.7066
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	35861669	55312612	10191	0.7977
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	55313000	55313817	2	-1.5121
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	55314287	58034680	1725	0.8051
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	58035229	58038110	2	2.2513
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	58044074	59097854	593	0.7926
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	20	61305	1560999	1206	0.0295
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	20	1561580	1571103	14	-1.25
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	20	1571272	1571903	9	-0.1013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	20	1572135	1598106	20	-1.5037
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	20	1598336	1994350	341	0.0678
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	20	1996770	1997648	3	-1.1827
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	20	1999855	15301374	10058	0.0529
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	20	15301902	15302374	3	-2.4717
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	20	15305258	62916068	30818	0.0383
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	20	62954695	62956153	5	-2.7486
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	21	10736871	10943554	35	0.2624
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	21	10953424	14566371	123	-0.244
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	21	14570284	21815968	4872	0.0474
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	21	21816114	21828471	34	0.3533
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	21	21828581	44968053	17564	0.0386
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	21	44970873	44972812	2	-2.5479
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	21	44973667	48096957	1765	0.0117
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	22	16052528	22380743	3154	0.0063
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	22	22381537	22386434	13	0.654
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	22	22386829	22491536	176	0.0258
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	22	22491845	22508577	52	0.285
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	22	22508715	25081338	1601	0.0039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	22	25082115	25082534	3	-1.3046
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	22	25087674	39350222	10511	0.0138
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	22	39351466	39375307	25	-0.728
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	22	39389628	42897282	1894	-5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	22	42899440	42955431	25	0.4041
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	22	42955788	51234455	6105	0.0156
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	X	168477	3979633	876	-0.0277
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	X	3980002	3981050	4	-3.0957
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	X	3982130	47886996	28141	0.002
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	X	47887126	47887528	2	-6.4916
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	X	47888860	114200390	30960	0.0222
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	X	114204981	114397728	129	0.9812
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	X	114399364	150208237	21524	0.0064
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	X	150211413	150233206	36	0.8778
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	X	150238101	155182354	2457	-0.0049
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	Y	2650438	6035471	837	-2.4919
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	Y	6039351	6344041	139	-3.1926
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	Y	6344313	19478007	4646	-2.8117
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	Y	19478574	21088485	746	-3.2037
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	Y	21092444	24515802	1244	-2.8203
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	Y	24516081	26430674	375	-3.1459
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	Y	26430908	26473956	18	-2.1084
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	Y	26482088	27315972	102	-3.4231
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	Y	27367487	27718290	92	-2.68
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	Y	27720551	28423938	252	-3.2445
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	Y	28438116	59018259	183	-2.566
