Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	3208470	216247153	110229	0.0197
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	216248846	216248880	3	-1.2515
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	216260138	218154326	1344	0.0207
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	218154670	218184473	19	0.4929
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	218199362	238433135	13213	0.0227
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	238434130	238434145	2	-1.2854
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	238434398	245880329	4154	0.0191
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	474222	150101256	78077	0.0282
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	150101983	150101997	2	-2.1382
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	150102096	171741376	12885	0.0298
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	171742493	171752000	6	-0.7472
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	171754548	242124735	40227	0.03
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	526235	199023074	106294	0.0145
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	1043934	189836143	102651	0.5057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	967233	114784354	61003	0.5245
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	114784536	114784761	5	-1.1688
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	114786977	119912472	2973	0.5165
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	119912891	119913247	2	-1.6052
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	119913828	175295081	34424	0.5173
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	175300485	175305017	2	-0.8427
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	175604636	180293075	2019	0.5079
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	959281	14978678	9982	0.4996
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	14981941	15064881	52	0.7638
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	15064962	26716643	7643	0.4798
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	26724395	26725285	2	-1.025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	26726164	64066083	16991	0.494
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	64066148	70483180	3501	-0.0237
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	70483200	72521397	1169	0.4684
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	72522630	73800519	829	-0.0227
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	73806595	85008568	6122	0.4659
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	85009859	167154586	48905	-0.8648
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	167154980	167157838	3	-3.7045
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	167157984	167189438	30	-0.9698
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	167189969	167197966	11	-1.6994
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	167198261	170745844	964	-0.8775
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	7	671810	101811265	51419	0.0192
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	7	101812662	101813796	2	-2.794
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	7	101818672	158077879	29839	0.024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	607667	145304484	81465	0.0204
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	9	779932	140058573	67967	0.0224
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	405240	135075077	80796	0.0189
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	11	446120	120989156	68142	-0.8361
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	11	120991843	120992556	3	-4.836
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	11	120992627	133647740	8653	-0.8389
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	12	760163	131671419	73880	0.024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	13	18348806	114005560	56340	-0.8328
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	14	19571208	105059083	49401	0.0225
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	15	21238778	38012400	8250	0.0312
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	15	38033071	43619449	2418	-0.8497
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	15	43620350	99701830	33803	0.0238
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	16	593460	87907437	40844	0.0163
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	17	933971	78510305	36964	0.014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	18	319586	75210228	42617	0.0275
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	235018	15008610	5437	-0.0427
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	15009830	15013305	4	-1.3469
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	15015126	22444276	2741	-0.0366
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	22448131	35976646	3074	0.8129
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	35979958	35980380	2	-1.0237
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	35982439	63570038	12685	0.7969
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	20	403764	61690281	37250	0.0356
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	21	14269492	46503202	20565	0.027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	22	15803930	47717016	16917	0.0068
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	X	3167107	154558783	63402	-1e-04
