Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	3218610	218180530	110286	0.0198
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	218182223	218182257	3	-1.2515
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	218193515	220087703	1344	0.0207
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	220088047	220117850	19	0.4929
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	220132739	240366512	13211	0.0226
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	240367507	240367522	2	-1.2854
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	1	240367775	247813706	4153	0.0191
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	484222	150393010	78066	0.0282
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	150393737	150393751	2	-2.1382
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	150393850	172033130	12886	0.0298
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	172034247	172043754	6	-0.7472
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	2	172046302	242476062	40229	0.03
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	3	2212571	197538677	106288	0.0145
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	4	1053934	188763651	102656	0.5056
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	914233	114756455	61002	0.5245
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	114756637	114756862	5	-1.1688
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	114759078	119884573	2974	0.5164
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	119884992	119885348	2	-1.6052
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	119885929	175362475	34424	0.5171
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	175367879	175372411	2	-0.8427
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	5	175672030	180360469	2019	0.5079
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	1014281	14870699	9983	0.4996
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	14873962	14956902	52	0.7638
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	14956983	26608664	7643	0.4798
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	26616416	26617306	2	-1.025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	26618185	64008124	16993	0.494
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	64008189	70426459	3501	-0.0239
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	70426479	72464676	1169	0.4684
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	72465909	73743798	829	-0.0227
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	73749874	84951849	6122	0.4658
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	84953140	167234596	48911	-0.8647
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	167234990	167237848	3	-3.7045
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	167237994	167269448	30	-0.9698
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	167269979	167277976	11	-1.6994
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	6	167278271	170903919	964	-0.8775
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	7	705284	102024263	51418	0.0192
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	7	102025660	102026794	2	-2.794
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	7	102031667	158385118	29840	0.024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	8	617667	145232496	81472	0.0204
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	9	789932	140938752	67979	0.0224
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	10	415240	135225087	80794	0.0189
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	11	456120	121483946	68133	-0.8361
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	11	121486633	121487346	3	-4.836
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	11	121487417	134142530	8653	-0.8389
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	12	889902	133161346	73875	0.024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	13	19450806	114987458	56336	-0.8327
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	14	20501368	105988038	49399	0.0224
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	15	23687685	40225108	8251	0.0312
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	15	40245779	45832157	2418	-0.8497
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	15	45833058	101884307	33800	0.0237
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	16	653459	89379936	40780	0.0161
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	17	987221	80917016	36964	0.014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	18	329586	77109240	42614	0.0275
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	284018	15147610	5437	-0.0427
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	15148830	15152305	4	-1.3469
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	15154126	22652436	2741	-0.0366
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	22656291	31284806	3074	0.8129
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	31288118	31288540	2	-1.0237
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	19	31290599	58878226	12685	0.7969
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	20	455764	62219837	37253	0.0355
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	21	15347621	47678774	20564	0.027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	22	17423930	49331012	16916	0.0068
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E05_802080	X	3157107	154905589	63419	3e-04
