Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	61735	17190004	8832	0.0109
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	17190862	17262247	62	0.4027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	17276241	25593128	5272	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	25595881	25646986	27	0.6905
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	25661501	35091674	4971	0.0112
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	35102654	35114268	21	-0.505
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	35115542	72768916	23858	0.0088
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	72768936	72811133	44	-0.6676
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	72811148	104158309	20071	7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	104159347	104260032	26	-0.4004
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	104260239	110233118	3613	0.0085
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	110233262	110236932	9	-0.9878
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	110236947	152555176	10015	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	152555527	152586594	36	0.5693
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	152590494	152754630	164	-0.013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	152756308	152778443	47	0.3729
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	152778526	174796405	14858	0.0027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	174796556	174802451	24	-0.5424
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	174802841	179330528	3073	0.0098
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	179331382	179333315	3	-1.3626
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	179339206	202567553	15363	0.0063
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	202567713	202567786	2	1.7063
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	202568542	210071062	5117	0.0031
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	210081613	210093571	6	-1.3229
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	210093649	220087703	7030	0.0028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	220088047	220113200	18	0.543
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	220117850	240366512	14101	0.005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	240367507	240367522	2	-1.4807
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	240367775	240391740	33	0.0135
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	240394015	240394139	6	-1.5452
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	1	240396105	249224388	5928	0.0178
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	2	12784	14702349	11042	0.0129
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	2	14703507	14703523	2	1.6047
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	2	14703632	34675467	13059	0.0156
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	2	34681494	34710728	13	-0.667
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	2	34710810	34717908	20	-0.0827
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	2	34717974	34736513	16	-0.7048
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	2	34737057	52754468	13044	0.0185
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	2	52754480	52781542	39	-2.0701
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	2	52787949	129638478	43131	0.0136
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	2	129638502	129639236	12	-0.6597
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	2	129640297	146864457	10482	0.012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	2	146864583	146877806	21	0.8794
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	2	146878395	243089456	59140	0.0127
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	3	60345	6646543	5844	0.0245
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	3	6651128	6653332	23	-0.7642
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	3	6655078	68725751	41981	0.0022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	3	68732028	68747413	16	1.1097
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	3	68748758	197896118	77046	0.0031
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	4	12281	260626	153	-0.1287
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	4	260639	260807	2	1.4261
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	4	266863	406376	47	0.075
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	4	407068	407084	2	-1.3431
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	4	418144	4166518	1513	-0.0135
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	4	4166983	4166997	2	-1.7287
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	4	4167133	10210294	4084	-0.0052
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	4	10210390	10244955	44	0.6116
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	4	10245898	49216631	25995	0.004
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	4	49267784	49658612	26	-0.5619
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	4	52685699	69372003	10487	0.0056
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	4	69374941	69505115	67	0.4793
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	4	69506334	108066735	23295	0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	4	108066797	108076519	28	0.4125
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	4	108076533	115173700	4413	0.0059
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	4	115175323	115184252	25	0.8122
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	4	115184266	116764888	959	0.0127
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	4	116765206	116767385	3	-1.3271
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	4	116769520	161880812	27080	0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	4	161880906	161884396	8	0.9234
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	4	161884584	162045149	137	0.0637
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	4	162045353	162046342	2	-1.496
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	4	162046365	185759930	15533	0.009
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	4	185763293	185778750	11	-0.8034
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	4	185778979	191027923	3528	9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	5	15532	46196114	30783	0.0029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	5	46199434	46199435	2	-2.1808
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	5	46209299	177198449	80299	0.0036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	5	177227551	177232605	3	2.8655
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	5	177254965	179104050	1084	0.0084
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	5	179104070	179105328	11	0.8652
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	5	179108197	180790320	907	0.0202
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	6	149661	258265	103	0.044
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	6	260376	294474	19	0.5312
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	6	294725	4253413	3244	0.0035
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	6	4255745	4471635	212	-0.9294
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	6	4478070	14870699	8130	0.003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	6	14873962	14956902	52	0.4979
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	6	14956983	29843434	9990	9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	6	29844034	29850196	8	-1.4758
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	6	29850274	31280823	671	3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	6	31286276	31296451	11	-1.5652
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	6	31309924	53931084	14316	0.0032
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	6	53931151	53931855	7	1.5063
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	6	53935348	57703920	2195	-0.01
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	6	57705902	57712992	7	-0.7883
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	6	57713195	66394090	2854	0.0054
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	6	66399482	66403852	23	-1.84
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	6	66407127	77436532	7219	0.0038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	6	77439868	77452641	18	-0.6264
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	6	77452673	78962889	982	0.0067
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	6	78969065	79032592	109	-0.6351
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	6	79034940	81284638	1440	-0.0057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	6	81284716	81289534	29	-0.8474
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	6	81294341	103734829	14016	0.0078
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	6	103737976	103762049	45	0.7853
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	6	103762061	171051005	44243	0.0044
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	7	43355	22533149	16184	0.0123
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	7	22536328	22536724	2	-1.7295
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	7	22536813	54380373	22380	0.0034
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	7	54386505	54386510	3	1.6253
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	7	54386512	54386517	3	4.2115
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	7	54393488	97385970	22158	0.0047
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	7	97395460	97402227	14	-0.6368
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	7	97402288	109433798	6635	0.0029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	7	109437092	109437774	16	0.8361
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	7	109440917	109440923	7	-0.1011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	7	109441212	109453910	12	0.7615
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	7	109453982	126045556	10035	0.0083
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	7	126045651	126046876	11	-0.7392
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	7	126046877	152589484	16459	0.0087
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	7	152589713	152589802	2	-2.3194
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	7	152593022	153779015	912	0.0087
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	7	153779024	153789995	3	-1.281
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	7	153790035	159127004	3665	0.009
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	8	31254	5598764	6100	0.0305
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	8	5598770	5603952	19	-0.6112
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	8	5603986	7170818	1713	0.0132
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	8	7171097	7738435	139	0.2927
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	8	7744064	8386191	396	0.0025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	8	8386357	8386442	2	-2.365
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	8	8388307	12443055	3048	0.0092
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	8	12473543	12491639	9	-1.548
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	8	12507071	39230659	19466	-8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	8	39235603	39386965	59	-1.9368
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	8	39388299	40771996	1075	-0.0154
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	8	40777852	40778471	2	-2.0655
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	8	40783680	112294466	40977	0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	8	112294646	112295260	7	-1.4943
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	8	112300281	142573565	21474	0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	8	142574141	142595796	23	0.4259
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	8	142595917	146298155	1439	0.0115
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	9	46587	88030	9	-0.8311
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	9	93270	23363115	20440	0.0138
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	9	23363933	23373484	7	1.1415
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	9	23378488	43472537	10917	0.0121
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	9	43505852	43800186	38	0.351
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	9	44114872	44243434	29	-0.1839
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	9	44244880	44446136	18	0.7183
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	9	44469328	65616971	134	0.0226
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	9	65617146	65672607	3	-1.8168
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	9	66323059	98250231	19588	-0.0048
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	9	98250270	98250958	3	1.2661
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	9	98253654	138140002	27569	0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	9	138151672	138310488	117	0.5806
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	9	138311561	139705611	514	0.0082
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	9	139705676	139711458	2	1.4872
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	9	139711705	141091394	527	0.0447
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	10	72759	24375263	19242	0.0073
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	10	24377674	24378054	11	-2.1093
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	10	24378908	42690562	9960	-0.0027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	10	42706961	42706976	2	-1.5765
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	10	42717887	46312487	2352	0.0079
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	10	46485761	46511281	4	0.9958
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	10	46527677	47058973	94	-0.0705
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	10	47058988	47059786	13	0.3532
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	10	47059806	47771030	267	-0.1258
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	10	47897394	47948060	4	-1.8267
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	10	47960476	51231576	1666	0.0182
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	10	51335029	51397071	2	1.6554
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	10	51449369	59203049	5554	0.0128
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	10	59210505	59210535	3	-1.2194
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	10	59210773	67306276	5565	-0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	10	67307923	67314430	27	-0.4288
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	10	67314446	78252851	6803	0.0079
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	10	78257061	78257610	2	2.4331
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	10	78261267	81443890	2456	-0.0071
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	10	81449007	81523306	7	-0.8378
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	10	81559043	135506704	37042	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	11	198510	4238406	1789	0.0056
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	11	4239054	4336529	28	-0.6134
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	11	4346809	18937467	10930	-8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	11	18937632	18971622	72	0.3077
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	11	18971694	25654935	5282	0.0024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	11	25655213	25660676	2	-3.8305
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	11	25662734	60965476	20015	0.0025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	11	60984460	61000494	2	-1.8674
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	11	61015806	101594384	25243	0.0039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	11	101597860	101597964	4	1.2376
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	11	101598212	105091519	2467	0.0123
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	11	105092390	105096513	4	-1.8774
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	11	105097112	124771531	13512	5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	11	124775987	124777418	3	-2.5324
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	11	124788668	134944770	7779	0.0076
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	12	150442	9617083	6197	0.0154
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	12	9619168	9739885	42	0.3141
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	12	9739997	12530073	2033	0.0062
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	12	12530697	12537497	12	0.5674
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	12	12537513	33294660	14578	0.0117
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	12	33301406	33307078	26	-2.7204
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	12	33307374	119983825	53078	0.0032
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	12	119988887	119990748	15	-0.8481
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	12	119990761	133778189	9077	0.0186
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	13	19026949	23625808	2887	0.0158
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	13	23626037	23633279	19	0.5458
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	13	23633501	38071135	10655	0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	13	38072036	38084757	16	-0.5435
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	13	38088330	39052811	701	0.0211
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	13	39057572	39058056	2	1.5813
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	13	39065057	47031713	5472	0.0077
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	13	47034809	47036022	2	-1.6936
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	13	47047212	72476988	15388	0.0107
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	13	72477555	72480556	4	-1.9163
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	13	72480605	95977952	15475	0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	13	95986166	95999182	12	-0.7814
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	13	96000749	115108397	13646	0.0037
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	14	19002124	19849591	65	-0.0606
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	14	19852833	19909264	3	-1.5571
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	14	19938441	70018047	31617	0.0058
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	14	70018368	70022467	8	-2.7989
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	14	70022713	106460902	23416	0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	14	106479675	106479941	2	1.739
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	14	106482128	106530687	22	0.0713
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	14	106534144	106567100	16	0.8687
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	14	106569463	107152270	321	0.0542
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	14	107152343	107160325	7	-1.6981
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	14	107160399	107285437	89	-0.1643
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	15	20016328	20578161	95	0.0059
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	15	20578304	20601821	32	-0.3918
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	15	20602052	76891241	34211	0.005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	15	76891511	76895064	11	0.6695
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	15	76895079	76895769	5	0.021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	15	76895771	76895775	5	0.6642
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	15	76902179	102469040	17684	0.0096
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	16	60777	32482955	20141	0.0155
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	16	32483006	32609274	29	0.444
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	16	32614875	33484587	111	0.0855
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	16	33484975	33627826	53	0.3437
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	16	33631830	53455742	4964	-0.0031
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	16	53458017	53469807	4	0.9493
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	16	53469929	55796594	2026	0.0068
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	16	55798222	55798779	3	2.9416
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	16	55804348	78371608	14448	-0.0035
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	16	78372440	78384765	17	0.8367
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	16	78385001	90287535	10643	0.0113
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	17	526	52156997	28044	0.007
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	17	52158793	52159075	2	-1.652
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	17	52164612	81049726	17253	0.0063
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	18	11543	36581503	21797	0.0069
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	18	36588710	36591423	4	-1.1402
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	18	36591548	38672424	1305	-0.024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	18	38672478	38672765	4	0.9776
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	18	38672795	40056657	960	-0.0063
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	18	40056672	40057471	20	-0.5607
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	18	40057767	41974818	1126	0.0222
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	18	41976886	41978625	6	-0.8604
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	18	41982671	78015057	25575	0.0107
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	19	90910	37753239	17791	0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	19	37753941	37755731	4	-1.6948
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	19	37794850	59097854	11566	0.0117
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	20	61305	1560999	1207	0.0277
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	20	1561580	1597946	42	-0.9332
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	20	1598106	15301374	10406	0.0108
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	20	15301902	15302374	3	-1.9756
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	20	15305258	62916068	30834	0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	20	62954695	62956153	5	-2.3959
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	21	10736871	10943554	35	0.3618
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	21	10953424	44968053	22596	0.0053
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	21	44970873	44972812	2	-2.3146
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	21	44973667	48096957	1766	0.0087
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	22	16052528	42897282	17434	0.0079
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	22	42899440	42977190	35	0.4711
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	22	42980051	51234455	6097	0.0053
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	X	168477	112755277	59439	0.0024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	X	112755748	112756326	5	-2.5627
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	X	112756531	114204981	798	-0.0064
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	X	114205618	114227131	20	0.9895
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	X	114228052	114233047	7	1.7997
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	X	114234172	114397728	101	0.8526
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	X	114399364	141027714	15382	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	X	141028056	141028643	3	-3.0296
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	X	141028724	150208237	6236	0.0054
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	X	150211413	150233056	34	0.8972
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	X	150233070	155182354	2476	-0.0054
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E06_801982	Y	2650438	59018259	8635	-0.9394
