Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	1	3218610	247813706	129035	0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	2	484222	242476062	131211	0.0075
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	3	2212571	47464757	26741	-0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	3	47470569	47470787	2	-1.967
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	3	47513231	197538677	79571	0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	4	1053934	176371655	96591	5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	4	176376710	176380825	5	-0.9921
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	4	176385179	176699362	127	0.0136
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	4	176700366	176700465	2	-1.2732
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	4	176700569	183014393	3481	-0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	4	183014495	183016944	3	-1.1335
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	4	183021079	188763651	2445	0.0095
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	5	914233	31204711	17907	-0.0029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	5	31204843	31205335	2	-2.4417
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	5	31206601	36787878	3341	9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	5	36788095	36792628	4	-1.3787
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	5	36792815	180360469	79168	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	6	1014281	170903919	96416	0
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	7	705284	158385118	81277	0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	8	617667	145232496	81489	9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	9	789932	119031408	55283	-0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	9	119031682	119032615	2	-1.4042
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	9	119033334	140938752	12693	-0.0039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	10	415240	135225087	80809	7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	11	456120	134142530	77204	-0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	12	889902	114124239	63891	0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	12	114124691	114125222	2	-1.3663
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	12	114125251	133161346	9997	4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	13	19450806	114987458	56592	-5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	14	20501368	105988038	49400	0.0025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	15	23687685	101884307	44486	-0.002
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	16	653459	89379936	40782	1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	17	987221	80917016	36968	-1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	18	329586	77109240	42623	3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	19	284018	21710955	7894	0.0057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	19	21717303	21721674	2	-1.5948
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	19	21722305	58878226	16048	0.0036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	20	455764	62219837	37264	0.0027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	21	15347621	25293109	5904	-0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	21	25296170	25299689	4	-1.1657
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	21	25299758	47678774	14658	0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	22	17423930	26279845	1947	-0.0058
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	22	26279964	26283975	4	-1.4163
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	22	26283990	46877238	13048	-0.0037
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	22	46877389	46878037	2	-1.3642
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	22	46878038	48727259	1454	-0.0024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	22	48727674	48730686	2	-1.5527
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	22	48736308	49331012	463	-0.0185
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E09_802104	X	3157107	154905589	63763	8e-04
