Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	1	3208470	15233308	6576	-0.0028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	1	15234943	15235131	2	-1.7085
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	1	15238827	245880329	122349	4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	2	474222	242124735	131151	0.007
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	3	526235	36423071	20372	0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	3	36426994	36427368	2	-1.4301
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	3	36428243	105394731	35761	5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	3	105396121	105397447	2	-1.7035
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	3	105397517	199023074	50118	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	4	1043934	189836143	102610	0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	5	967233	144413524	77996	0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	5	144422391	144422519	2	-1.3622
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	5	144423710	169571685	16621	2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	5	169572329	169572479	3	-1.3755
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	5	169572838	180293075	5773	-0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	6	959281	170745844	96368	0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	7	671810	16770515	8192	-0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	7	16772826	16774997	2	-1.526
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	7	16778078	158077879	73040	0.0026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	8	607667	15818666	7569	0.0027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	8	15834133	15919278	92	-1.1267
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	8	16068755	81171643	36277	-0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	8	81176505	81180839	5	-1.0328
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	8	81185425	145304484	37503	0.0036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	9	779932	140058573	67952	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	10	405240	5499387	3259	-0.0031
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	10	5499681	5509005	5	-0.7776
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	10	5516158	9469522	3059	-0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	10	9469825	9618580	81	-0.9686
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	10	9809288	135075077	74364	-7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	11	446120	133647740	77175	1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	12	760163	32207886	18771	-0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	12	32212097	32212179	2	-1.3108
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	12	32215103	33099481	617	-0.004
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	12	33107345	33107566	2	-1.1109
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	12	33108339	40283642	1874	0.0088
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	12	40283917	40283954	2	-1.215
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	12	40284468	53273812	6699	0.0026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	12	53276730	53282139	7	-0.8432
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	12	53283639	131671419	45881	-7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	13	18348806	112082814	55915	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	13	112083392	112088532	2	-1.4094
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	13	112093518	114005560	636	0.0038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	14	19571208	105059083	49386	7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	15	21238778	44224025	11059	8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	15	44226603	44240296	7	-0.8114
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	15	44247305	84092273	23630	-4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	15	84093475	84094101	2	-1.466
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	15	84094647	99701830	9781	0.0034
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	16	593460	87907437	40836	1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	17	933971	78510305	36956	-0.0027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	18	319586	75210228	42602	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	19	235018	5584238	1373	0.0108
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	19	5584878	5586801	2	-1.1473
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	19	5587364	63570038	22562	-5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	20	403764	61690281	37251	-0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	21	14269492	46503202	20563	-0.0049
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	22	15803930	47717016	16914	-0.003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	X	3167107	154558783	63732	2e-04
